BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781111|ref|YP_003065524.1| geranyltranstransferase
protein [Candidatus Liberibacter asiaticus str. psy62]
         (237 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781111|ref|YP_003065524.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040788|gb|ACT57584.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 237

 Score =  488 bits (1257), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE
Sbjct: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG
Sbjct: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI
Sbjct: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK
Sbjct: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237


>gi|315122480|ref|YP_004062969.1| geranyltranstransferase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495882|gb|ADR52481.1| geranyltranstransferase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 297

 Score =  345 bits (885), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 167/233 (71%), Positives = 197/233 (84%), Gaps = 4/233 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN  L  KLQENS++I+++L+DLL    SH  +  NDRL SAIRYA+LGGK IRSFLV E
Sbjct: 1   MNDDLLLKLQENSQKIESLLNDLL----SHQSSYLNDRLRSAIRYAILGGKNIRSFLVAE 56

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           CASLF +++ T LRVGAAIEC+HCYSLIHDDLPSMDNGYIRRGKPT+H+QYDE TAI+AG
Sbjct: 57  CASLFGLSNPTVLRVGAAIECVHCYSLIHDDLPSMDNGYIRRGKPTLHLQYDEATAILAG 116

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           N LLTYAFEII SP+TQLKD+IRS+L LSL  N G+QGMLGGQMLDIQ+E +DE Q+  I
Sbjct: 117 NSLLTYAFEIICSPETQLKDSIRSELTLSLARNAGIQGMLGGQMLDIQNECLDEKQLLTI 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           Q+MKTG+LM FACE+GAI+AH +Q EK RLR +GENLGI+FQL DDLLD EE+
Sbjct: 177 QEMKTGSLMRFACEAGAIIAHTNQEEKARLRYYGENLGIVFQLVDDLLDFEEN 229


>gi|190893863|ref|YP_001980405.1| geranyltranstransferase [Rhizobium etli CIAT 652]
 gi|190699142|gb|ACE93227.1| geranyltranstransferase protein [Rhizobium etli CIAT 652]
          Length = 327

 Score =  214 bits (545), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 118/230 (51%), Positives = 167/230 (72%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N++ I+ +LD LLL  A   +    + L  A+ YA+L GGK++R FLV E A+L 
Sbjct: 33  TRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVESAALL 92

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   ALR+GAA+EC+HCYSL+HDDLP+MD+  IRRGKPTVH+++DE TAI+AG+ LLT
Sbjct: 93  GGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDIRRGKPTVHVKFDEATAILAGDSLLT 152

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           YAF+I+++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q M
Sbjct: 153 YAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 212

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD   D
Sbjct: 213 KTGALIRFACEAGAILAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSD 262


>gi|319899404|ref|YP_004159501.1| geranyltranstransferase [Bartonella clarridgeiae 73]
 gi|319403372|emb|CBI76931.1| geranyltranstransferase [Bartonella clarridgeiae 73]
          Length = 301

 Score =  213 bits (543), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/231 (47%), Positives = 158/231 (68%), Gaps = 16/231 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L +++  ++  LD LL   A + +    + L++A+R+ +L GGK++R FLV + A++F++
Sbjct: 8   LAKHAYNVEKRLDTLLSHKAQNGEITRPEILINAMRHGVLNGGKRLRPFLVIQSAAIFDI 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +L +G A+EC+HCYSLIHDDLP++DN  +RRGKPTVH+ +DE TAI+AGN LLT+A
Sbjct: 68  PPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHVAFDEATAILAGNALLTFA 127

Query: 128 FEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178
           FEII+       SPKT++       L+ +LT   GL GM+GGQMLD++ E    DE+   
Sbjct: 128 FEIIAHKEAYSFSPKTKI------DLITALTQAAGLGGMIGGQMLDLEAEKKPQDESATI 181

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +Q+MKT ALM FAC++GAIM  AS+   ++L  FG  +G+ FQL DDLLD
Sbjct: 182 TLQQMKTAALMRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLD 232


>gi|319404799|emb|CBI78400.1| geranyltranstransferase [Bartonella rochalimae ATCC BAA-1498]
          Length = 300

 Score =  213 bits (542), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/224 (47%), Positives = 156/224 (69%), Gaps = 3/224 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L ++++ ++  LD LL   A + +    + L++A+R+ +L GGK++R FLV + A+LF++
Sbjct: 8   LAKHAQNVEKRLDILLSHKAQNDEITRPEILINAMRHGVLNGGKRLRPFLVIQSAALFDI 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   +L +G A+ECIHCYSLIHDDLP++DN  +RRG+PTVHI +DE TAI+AGN LLT+A
Sbjct: 68  SPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEGTAILAGNALLTFA 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           FEII+          R +L+ +LT   GL GM+GGQMLD++ E    +E+    +Q+MKT
Sbjct: 128 FEIIAHKACSFSSKTRIELITALTQAAGLGGMIGGQMLDLEAEKKPQNESATITLQQMKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AL+ FAC++GAIM  AS+    +L  FG ++G+ FQL DDLLD
Sbjct: 188 AALIRFACQAGAIMGRASKTLTHKLASFGTHIGLAFQLTDDLLD 231


>gi|218463158|ref|ZP_03503249.1| geranyltranstransferase protein [Rhizobium etli Kim 5]
          Length = 304

 Score =  213 bits (542), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/230 (51%), Positives = 167/230 (72%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N++ I+ +LD LLL  A   +    + L SA+ YA+L GGK++R FLV E A+L 
Sbjct: 10  TRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVESAALL 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+ LLT
Sbjct: 70  GGDAKAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGDSLLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           YAF+I+++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q M
Sbjct: 130 YAFDIVAAPETALPDASKASLVLALARAAGLGGMAGGQALDLAAEKQAQDEAGIIRLQAM 189

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GAI+A + Q+++ RLR FGE +G+ FQLADD+LD   D
Sbjct: 190 KTGALIRFACEAGAIIAGSPQDDRRRLRAFGEKIGLAFQLADDILDLTSD 239


>gi|327191787|gb|EGE58789.1| geranyltranstransferase protein [Rhizobium etli CNPAF512]
          Length = 387

 Score =  212 bits (540), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/230 (50%), Positives = 167/230 (72%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N++ I+ +LD LLL  A   +    + L  A+ YA+L GGK++R FLV E A+L 
Sbjct: 93  TRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVESAALL 152

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVH+++DE TAI+AG+ LLT
Sbjct: 153 GGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGDSLLT 212

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           YAF+I+++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q M
Sbjct: 213 YAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 272

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD   D
Sbjct: 273 KTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSD 322


>gi|86359590|ref|YP_471482.1| geranyltranstransferase protein [Rhizobium etli CFN 42]
 gi|86283692|gb|ABC92755.1| geranyltranstransferase protein [Rhizobium etli CFN 42]
          Length = 331

 Score =  211 bits (538), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/230 (50%), Positives = 169/230 (73%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N+++I+ +L  LL   A   +    + L SA+ YA+L GGK++R FLV E A+L 
Sbjct: 37  TRLKNNARKIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVAESAALL 96

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVH+++DE TAI+AG+ LLT
Sbjct: 97  GGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGDSLLT 156

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           YAF+I+++P+T L D+ ++ L+L+L    GL GM GGQ LD+  E    DET +  +Q M
Sbjct: 157 YAFDIVAAPETALPDSSKASLVLALARAAGLGGMAGGQALDLAAEKKAPDETGIIRLQAM 216

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD   D
Sbjct: 217 KTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSD 266


>gi|153008460|ref|YP_001369675.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151560348|gb|ABS13846.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 304

 Score =  211 bits (538), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/228 (51%), Positives = 155/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++  L  LL Q     +    +RLL+A+R+ +L GGK++R FLV E A+LF  
Sbjct: 12  LNHRAMEVEMALTGLLDQRLKTGEIARPERLLAAMRHGVLNGGKRLRPFLVVESAALFGK 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+GLLTYA
Sbjct: 72  GSDAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDGLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           F+IISS +T L   IR QL+ +L    GL GM+GGQ LD+  E    DE  +  +Q MKT
Sbjct: 132 FDIISSDETDLDAAIRLQLVSALARASGLGGMVGGQALDLMAETSKPDEAGIITLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAI+A+AS  ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIIANASSEDRERMAEFGSAIGLAFQLADDLLDVTAD 239


>gi|319406284|emb|CBI79921.1| geranyltranstransferase [Bartonella sp. AR 15-3]
          Length = 300

 Score =  210 bits (534), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 105/224 (46%), Positives = 151/224 (67%), Gaps = 3/224 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L +++  ++  LD LL   A + +    + L++A+RY +L GGK+ R FLV + A+LF++
Sbjct: 8   LAKHAHNVEKRLDILLSHKAQNGEISRPEILINAMRYGVLNGGKRFRPFLVIQSAALFDI 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +L +G A+EC+HCYSLIHDDLP++DN  +RRGKPTVH  +DE TAI+AGN LLT+A
Sbjct: 68  PPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHTAFDEGTAILAGNALLTFA 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           FEII+          +  L+ +LT   GL GM+GGQMLD++ E    +E+    +Q+MKT
Sbjct: 128 FEIIAHKACSFSSKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQNESATITLQQMKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AL+ FAC++GAIM  AS+   ++L  FG  +G+ FQL DDLLD
Sbjct: 188 AALIRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLD 231


>gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
           quintana str. Toulouse]
 gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
           quintana str. Toulouse]
          Length = 301

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/220 (47%), Positives = 150/220 (68%), Gaps = 8/220 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R+DT+L D +     + +    + L+ A+RY +L GGK++R FLV +  +LF++     
Sbjct: 17  RRLDTLLSDQV----QNGEISRPEALIKAMRYGVLNGGKRLRPFLVIQSGALFDIPAEYC 72

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L V +A+EC+HCYSLIHDDLP+MDN  +RRG+PTVHI +DE TAI+AGN LLT+AFEII+
Sbjct: 73  LDVASALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIA 132

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALM 189
              + L    + +L+ +L  + GL GM+GGQMLD++ E   +     +  +Q MKT AL+
Sbjct: 133 HKASTLPFETKIKLITTLAQSAGLGGMIGGQMLDLEAEKKPQDSAISILTLQHMKTAALI 192

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            FAC++GAI+ +AS+   E+L  FG  LG+ FQL DDLLD
Sbjct: 193 SFACQAGAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLD 232


>gi|209551400|ref|YP_002283317.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537156|gb|ACI57091.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 304

 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/230 (51%), Positives = 164/230 (71%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N++ I+ +LD LLL  A   +    + L SA+ YA+L GGK++R FLV E A+L 
Sbjct: 10  TRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVESAALL 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   A RVGAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+ LLT
Sbjct: 70  GGDDEAARRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           YAF+II++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q M
Sbjct: 130 YAFDIIAAPETALADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 189

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GA++A +   ++ RLR FGE +G+ FQLADD+LD   D
Sbjct: 190 KTGALIRFACEAGALIAASPPEDRRRLRAFGEKIGLAFQLADDILDLTSD 239


>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
           henselae str. Houston-1]
 gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
           henselae str. Houston-1]
          Length = 300

 Score =  208 bits (530), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 107/220 (48%), Positives = 149/220 (67%), Gaps = 7/220 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KR+ T+L D +     + +    + LL A+RY +L GGK++R FLV +  +LF++    +
Sbjct: 17  KRLATLLSDQV----QNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSCALFDIPIEYS 72

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L V +A+ECIHCYSLIHDDLP+MDN  +RRG+PTVHI +DE TAI+AGN LLT+AFEII+
Sbjct: 73  LNVASALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIA 132

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
              ++L    R +L+ +L    GL GM+GGQMLD++ E    +   +  +Q MKT  L+ 
Sbjct: 133 HKTSELSFETRIRLITALAQASGLGGMIGGQMLDLEAEKKPQESKDITTLQHMKTATLIS 192

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           FAC++GAI+ +ASQ   E+L  FG  LG+ FQL DDLLD 
Sbjct: 193 FACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDV 232


>gi|319407760|emb|CBI81407.1| geranyltranstransferase [Bartonella sp. 1-1C]
          Length = 300

 Score =  207 bits (528), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 104/224 (46%), Positives = 154/224 (68%), Gaps = 3/224 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L ++++ ++  LD LL   A + +    + L++A+R+ +L GGK++R FLV + A+LF++
Sbjct: 8   LAKHAQNVEKRLDMLLSHKAQNDEIIRPEMLINAMRHGVLNGGKRLRPFLVIQSAALFDI 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +L +G A+ECIHCYSLIHDDLP++DN  +RRG+PTVHI +DE TAI+AGN LLT+A
Sbjct: 68  PPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEATAILAGNALLTFA 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           FEII+          + +L+ +LT   GL GM+GGQ+LD++ E    +E     +Q+MKT
Sbjct: 128 FEIIAHKTCSFSPKTKIELITALTQAAGLGGMIGGQLLDLEAEKKPHNENATTTLQQMKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AL+ FAC++GAIM  AS+    +L  FG ++G+ FQL DDLLD
Sbjct: 188 AALIRFACQAGAIMGRASKTLTHQLASFGTHIGLAFQLTDDLLD 231


>gi|241206841|ref|YP_002977937.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860731|gb|ACS58398.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 304

 Score =  207 bits (528), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 117/230 (50%), Positives = 164/230 (71%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N++ I+ +LD LL  +A   +    + L  A+ YA+L GGK++R FLV E A+L 
Sbjct: 10  TRLKNNARDIEALLDALLSPSALSDEIARPETLRDAMHYAVLNGGKRLRPFLVVESAALL 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   ALRVGAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+ LLT
Sbjct: 70  GGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           YAF+II++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q M
Sbjct: 130 YAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 189

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GA++A +   ++ RLR FGE +G+ FQLADD+LD   D
Sbjct: 190 KTGALIRFACEAGAVIAASRPEDRRRLRAFGEKIGLAFQLADDILDLTSD 239


>gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510]
 gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510]
          Length = 300

 Score =  205 bits (522), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 96/197 (48%), Positives = 136/197 (69%), Gaps = 3/197 (1%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+  A+RY  L GGK++R FLV + ++LF VN   A+R  AA+E +H YSL+HDDLP+MD
Sbjct: 37  RVFEAMRYGCLNGGKRLRPFLVMQSSALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMD 96

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +G +RRG+PT H Q+DE TAI+AG+GLLT AFE+++ P T    NIR QL+ +L    G 
Sbjct: 97  DGELRRGRPTCHRQFDEATAILAGDGLLTLAFEVLADPATHEDPNIRCQLVTALAKAAGG 156

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQMLD+  + E  D      +Q++KTG ++ F+CE+G I+  AS  ++  LR + 
Sbjct: 157 HGMVGGQMLDLIAEHETFDLGTTTRLQRLKTGEMIAFSCEAGGILGKASPPQRTALRAYA 216

Query: 215 ENLGIIFQLADDLLDCE 231
            +LG+ FQ+ DDLLD E
Sbjct: 217 HDLGLAFQIVDDLLDVE 233


>gi|121601917|ref|YP_988458.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
 gi|120614094|gb|ABM44695.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
          Length = 300

 Score =  205 bits (522), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 109/223 (48%), Positives = 147/223 (65%), Gaps = 6/223 (2%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +K  D +   L +   +H+Q     R   LL A+RY +L GGK +R F V + A+LF+V 
Sbjct: 9   AKHADAVKQRLNMLLNNHVQEGEIARPELLLQAMRYGVLNGGKCLRPFFVIQSAALFDVP 68

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL VG A+ECIHCYSLIHDDLP+MDN  +RRGKPTVH  +DE TAI+AGN LLT+AF
Sbjct: 69  PEHALDVGVALECIHCYSLIHDDLPAMDNDILRRGKPTVHKAFDEATAILAGNALLTFAF 128

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTG 186
           EII+     L    R  L+ +L    GL GM+GGQ+LD++ E    D T++  +Q+MKT 
Sbjct: 129 EIIAHKACALLPQTRLNLITALAQAAGLGGMIGGQILDLEAEKKPQDRTKILTLQRMKTA 188

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AL+ F+C++GAIM +AS +  ++   FG  +G+ FQL DDLLD
Sbjct: 189 ALISFSCQAGAIMGNASASITQQFADFGTQIGLAFQLTDDLLD 231


>gi|239832857|ref|ZP_04681186.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239825124|gb|EEQ96692.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 316

 Score =  205 bits (522), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/221 (51%), Positives = 151/221 (68%), Gaps = 3/221 (1%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           ++  L  LL Q     +    +RLL+A+R+ +L GGK++R FLV E A+LF       LR
Sbjct: 31  VEMALTGLLDQRLRTGEIARPERLLAAMRHGVLNGGKRLRPFLVVESAALFGKGGDAVLR 90

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+I+SS 
Sbjct: 91  VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIVSSD 150

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
           +T L   IR +L+ +L    GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ FA
Sbjct: 151 ETDLDPAIRVRLVSALARASGLGGMAGGQALDLMAETSKPDEAGIITLQAMKTGALIRFA 210

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           CE+GAI+A+AS  ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 211 CEAGAIIANASTEDRERMAEFGSAIGLAFQLADDLLDVTAD 251


>gi|116254354|ref|YP_770192.1| geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115259002|emb|CAK10111.1| putative geranyltranstransferase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 304

 Score =  205 bits (521), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/230 (50%), Positives = 164/230 (71%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N++ I+ +LD LL  +A   +    + L  A+ YA+L GGK++R FLV E A+L 
Sbjct: 10  TRLKNNARDIEALLDALLSPSAFSDEIARPETLRDAMHYAVLNGGKRLRPFLVVESAALL 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   ALRVGAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+ LLT
Sbjct: 70  GGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           YAF+II++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q M
Sbjct: 130 YAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIRLQAM 189

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GA+++ +   ++ RLR FGE +G+ FQLADD+LD   D
Sbjct: 190 KTGALIRFACEAGAVISGSLAEDRRRLRAFGEKIGLAFQLADDILDLTSD 239


>gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14]
 gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14]
          Length = 308

 Score =  205 bits (521), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/243 (46%), Positives = 151/243 (62%), Gaps = 10/243 (4%)

Query: 1   MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54
           M  GL S     +L   +   +T+L  LL       +     RL+ A+RY+ LGG K++R
Sbjct: 1   MTSGLSSADFVKRLDTTADETETLLGTLLSDAVLPDEIARPKRLMDAMRYSSLGGGKRLR 60

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            FLV E +++F V   +AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H   D+ 
Sbjct: 61  PFLVVESSAVFGVPRDSALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTADDA 120

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FI 172
           TAI+AG+GLLT AF+II+  +      +R  L  +L    G+ GM+GGQMLD+  E  F 
Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHQDPAVRLLLTRALARAAGIGGMVGGQMLDLAGEGRFG 180

Query: 173 DE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           D     V  +Q+MKTGAL+ F C SGA++  ASQ + + L  +G  LG  FQ+ADDLLD 
Sbjct: 181 DREPVDVARLQQMKTGALLRFGCISGALLGQASQKDYQALDAYGRALGEAFQIADDLLDV 240

Query: 231 EED 233
           E D
Sbjct: 241 EGD 243


>gi|222087742|ref|YP_002546279.1| geranyltranstransferase protein [Agrobacterium radiobacter K84]
 gi|221725190|gb|ACM28346.1| geranyltranstransferase protein [Agrobacterium radiobacter K84]
          Length = 304

 Score =  205 bits (521), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/228 (50%), Positives = 164/228 (71%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L++N+ +++ +L  LL     + +     RLL A+R+ +L GGK++R FLV E A+L   
Sbjct: 12  LRDNAGKVEAVLSRLLADARLNDEIARPARLLEAMRHGVLNGGKRLRPFLVMETAALLGG 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVHI +D  TAI+AG+ LLTYA
Sbjct: 72  NADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDYATAILAGDSLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           F+II++P+T L  + + +L+L+L+   G+ GM GGQ LD+  E +  DE  +  +Q MKT
Sbjct: 132 FDIIAAPETDLPADRKMELVLALSRAAGIGGMAGGQALDLAAEKVTPDEQGITTLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAIMA AS  +++RLR FGE +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIMAGASAGDRQRLRSFGEKIGLAFQLADDLLDLTAD 239


>gi|23502633|ref|NP_698760.1| geranyltranstransferase [Brucella suis 1330]
 gi|161619701|ref|YP_001593588.1| polyprenyl synthetase [Brucella canis ATCC 23365]
 gi|254703547|ref|ZP_05165375.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
 gi|260568852|ref|ZP_05839320.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
 gi|261754180|ref|ZP_05997889.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
 gi|23348639|gb|AAN30675.1| geranyltranstransferase [Brucella suis 1330]
 gi|161336512|gb|ABX62817.1| Polyprenyl synthetase [Brucella canis ATCC 23365]
 gi|260154236|gb|EEW89318.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
 gi|261743933|gb|EEY31859.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
          Length = 304

 Score =  205 bits (521), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF  
Sbjct: 12  LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYA
Sbjct: 72  YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKT
Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEASIITLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239


>gi|150398316|ref|YP_001328783.1| polyprenyl synthetase [Sinorhizobium medicae WSM419]
 gi|150029831|gb|ABR61948.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419]
          Length = 304

 Score =  204 bits (520), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/232 (50%), Positives = 165/232 (71%), Gaps = 3/232 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
            P +L+ N+  ++ +L+ LL       +      LL A+R+A+L GGK++R FLV+E A+
Sbjct: 8   FPERLKSNAVAVEALLETLLDPAVRGGEISRPANLLEAMRHAVLNGGKRLRPFLVSETAA 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   ALR+GAA+ECIHCYSL+HDDLP+MDN  +RRGKPTVH+ +DE TAI+AG+ L
Sbjct: 68  LLGGDVQAALRIGAALECIHCYSLVHDDLPAMDNDDMRRGKPTVHVAFDEATAILAGDSL 127

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT++F+II++P+T L D  ++ L+L+L    G  GM GGQ LD+  E    DET + ++Q
Sbjct: 128 LTFSFDIIAAPETALSDRQKTALVLALARAAGHGGMAGGQALDLAAEKSAPDETGIVLLQ 187

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            MKTGAL+ FACE+GAI+A A+  +++RLR FGE +G+ FQLADDLLD   D
Sbjct: 188 SMKTGALLRFACEAGAIIADAAAEDRQRLRAFGEKIGLAFQLADDLLDLTAD 239


>gi|256114345|ref|ZP_05455078.1| Polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265995644|ref|ZP_06108201.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262766928|gb|EEZ12546.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 304

 Score =  204 bits (520), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF  
Sbjct: 12  LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYA
Sbjct: 72  YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKT
Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239


>gi|17986554|ref|NP_539188.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
 gi|62290646|ref|YP_222439.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
 gi|82700560|ref|YP_415134.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
 gi|225628336|ref|ZP_03786370.1| geranyltranstransferase [Brucella ceti str. Cudo]
 gi|225853224|ref|YP_002733457.1| polyprenyl synthetase [Brucella melitensis ATCC 23457]
 gi|237816147|ref|ZP_04595142.1| geranyltranstransferase [Brucella abortus str. 2308 A]
 gi|254689934|ref|ZP_05153188.1| geranyltranstransferase [Brucella abortus bv. 6 str. 870]
 gi|254694426|ref|ZP_05156254.1| geranyltranstransferase [Brucella abortus bv. 3 str. Tulya]
 gi|254698085|ref|ZP_05159913.1| geranyltranstransferase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254708366|ref|ZP_05170194.1| geranyltranstransferase [Brucella pinnipedialis M163/99/10]
 gi|254708781|ref|ZP_05170592.1| geranyltranstransferase [Brucella pinnipedialis B2/94]
 gi|254714624|ref|ZP_05176435.1| geranyltranstransferase [Brucella ceti M644/93/1]
 gi|254717522|ref|ZP_05179333.1| geranyltranstransferase [Brucella ceti M13/05/1]
 gi|254730969|ref|ZP_05189547.1| geranyltranstransferase [Brucella abortus bv. 4 str. 292]
 gi|256030307|ref|ZP_05443921.1| geranyltranstransferase [Brucella pinnipedialis M292/94/1]
 gi|256045376|ref|ZP_05448270.1| geranyltranstransferase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061806|ref|ZP_05451941.1| geranyltranstransferase [Brucella neotomae 5K33]
 gi|256160480|ref|ZP_05458169.1| geranyltranstransferase [Brucella ceti M490/95/1]
 gi|256255686|ref|ZP_05461222.1| geranyltranstransferase [Brucella ceti B1/94]
 gi|256258189|ref|ZP_05463725.1| geranyltranstransferase [Brucella abortus bv. 9 str. C68]
 gi|256263286|ref|ZP_05465818.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|256370183|ref|YP_003107694.1| geranyltranstransferase [Brucella microti CCM 4915]
 gi|260167981|ref|ZP_05754792.1| geranyltranstransferase [Brucella sp. F5/99]
 gi|260547118|ref|ZP_05822856.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
 gi|260565731|ref|ZP_05836214.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260755469|ref|ZP_05867817.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
 gi|260758692|ref|ZP_05871040.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
 gi|260762526|ref|ZP_05874863.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884489|ref|ZP_05896103.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
 gi|261214740|ref|ZP_05929021.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261219357|ref|ZP_05933638.1| polyprenyl synthetase [Brucella ceti M13/05/1]
 gi|261222894|ref|ZP_05937175.1| polyprenyl synthetase [Brucella ceti B1/94]
 gi|261315865|ref|ZP_05955062.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
 gi|261316274|ref|ZP_05955471.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
 gi|261322419|ref|ZP_05961616.1| polyprenyl synthetase [Brucella ceti M644/93/1]
 gi|261325809|ref|ZP_05965006.1| polyprenyl synthetase [Brucella neotomae 5K33]
 gi|261757424|ref|ZP_06001133.1| polyprenyl synthetase [Brucella sp. F5/99]
 gi|265987340|ref|ZP_06099897.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
 gi|265991805|ref|ZP_06104362.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265998853|ref|ZP_06111410.1| polyprenyl synthetase [Brucella ceti M490/95/1]
 gi|294851019|ref|ZP_06791695.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
 gi|297249039|ref|ZP_06932747.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
 gi|17982161|gb|AAL51452.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
 gi|62196778|gb|AAX75078.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
 gi|82616661|emb|CAJ11743.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
 gi|225616182|gb|EEH13230.1| geranyltranstransferase [Brucella ceti str. Cudo]
 gi|225641589|gb|ACO01503.1| Polyprenyl synthetase [Brucella melitensis ATCC 23457]
 gi|237788609|gb|EEP62822.1| geranyltranstransferase [Brucella abortus str. 2308 A]
 gi|256000346|gb|ACU48745.1| geranyltranstransferase [Brucella microti CCM 4915]
 gi|260095483|gb|EEW79361.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
 gi|260151104|gb|EEW86199.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260669010|gb|EEX55950.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672952|gb|EEX59773.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675577|gb|EEX62398.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
 gi|260874017|gb|EEX81086.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
 gi|260916347|gb|EEX83208.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260921478|gb|EEX88131.1| polyprenyl synthetase [Brucella ceti B1/94]
 gi|260924446|gb|EEX91014.1| polyprenyl synthetase [Brucella ceti M13/05/1]
 gi|261295109|gb|EEX98605.1| polyprenyl synthetase [Brucella ceti M644/93/1]
 gi|261295497|gb|EEX98993.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
 gi|261301789|gb|EEY05286.1| polyprenyl synthetase [Brucella neotomae 5K33]
 gi|261304891|gb|EEY08388.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737408|gb|EEY25404.1| polyprenyl synthetase [Brucella sp. F5/99]
 gi|262553542|gb|EEZ09311.1| polyprenyl synthetase [Brucella ceti M490/95/1]
 gi|263002761|gb|EEZ15164.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093252|gb|EEZ17349.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264659537|gb|EEZ29798.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
 gi|294821662|gb|EFG38658.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
 gi|297174172|gb|EFH33529.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
 gi|326409783|gb|ADZ66848.1| polyprenyl synthetase [Brucella melitensis M28]
 gi|326539499|gb|ADZ87714.1| polyprenyl synthetase [Brucella melitensis M5-90]
          Length = 304

 Score =  204 bits (519), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF  
Sbjct: 12  LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYA
Sbjct: 72  YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKT
Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239


>gi|148560740|ref|YP_001259620.1| geranyltranstransferase [Brucella ovis ATCC 25840]
 gi|148371997|gb|ABQ61976.1| geranyltranstransferase [Brucella ovis ATCC 25840]
          Length = 304

 Score =  204 bits (519), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF  
Sbjct: 12  LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYA
Sbjct: 72  YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKT
Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239


>gi|163845354|ref|YP_001623009.1| hypothetical protein BSUIS_B1253 [Brucella suis ATCC 23445]
 gi|163676077|gb|ABY40187.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 304

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF  
Sbjct: 12  LNRRAMEVEAALAGLLDECPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYA
Sbjct: 72  YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKT
Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239


>gi|254700427|ref|ZP_05162255.1| geranyltranstransferase [Brucella suis bv. 5 str. 513]
 gi|261750926|ref|ZP_05994635.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
 gi|261740679|gb|EEY28605.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
          Length = 304

 Score =  203 bits (517), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/228 (49%), Positives = 153/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++  L  L+ +     +     RL++A+R+ +L GGK++R FLV E A+LF  
Sbjct: 12  LNRRAMEVEAALAGLMDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYA
Sbjct: 72  YGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKT
Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 239


>gi|189024858|ref|YP_001935626.1| polyprenyl synthetase [Brucella abortus S19]
 gi|189020430|gb|ACD73152.1| Polyprenyl synthetase [Brucella abortus S19]
          Length = 288

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/221 (50%), Positives = 151/221 (68%), Gaps = 3/221 (1%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF       LR
Sbjct: 3   VEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVLR 62

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+II+S 
Sbjct: 63  VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASD 122

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
           +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ FA
Sbjct: 123 ETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRFA 182

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           CE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 183 CEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTAD 223


>gi|254719767|ref|ZP_05181578.1| Polyprenyl synthetase [Brucella sp. 83/13]
 gi|265984787|ref|ZP_06097522.1| polyprenyl synthetase [Brucella sp. 83/13]
 gi|264663379|gb|EEZ33640.1| polyprenyl synthetase [Brucella sp. 83/13]
          Length = 304

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/228 (49%), Positives = 154/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF  
Sbjct: 12  LNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQ 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYA
Sbjct: 72  HGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYA 131

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKT
Sbjct: 132 FDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GAI+A AS+ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 192 GALIRFACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTAD 239


>gi|306844758|ref|ZP_07477343.1| geranyltranstransferase [Brucella sp. BO1]
 gi|306274930|gb|EFM56700.1| geranyltranstransferase [Brucella sp. BO1]
          Length = 288

 Score =  202 bits (515), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/221 (50%), Positives = 152/221 (68%), Gaps = 3/221 (1%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF  +    LR
Sbjct: 3   VEAALASLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLR 62

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+II+S 
Sbjct: 63  VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIASD 122

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
           +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ FA
Sbjct: 123 ETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRFA 182

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           CE+GAI+A AS+ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 183 CEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTAD 223


>gi|306839463|ref|ZP_07472271.1| geranyltranstransferase [Brucella sp. NF 2653]
 gi|306405408|gb|EFM61679.1| geranyltranstransferase [Brucella sp. NF 2653]
          Length = 288

 Score =  202 bits (514), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/221 (50%), Positives = 152/221 (68%), Gaps = 3/221 (1%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           ++  L  LL +     +     RL++A+R+ +L GGK++R FLV E A+LF  +    LR
Sbjct: 3   VEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVLR 62

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+II+S 
Sbjct: 63  VAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIASD 122

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
           +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ FA
Sbjct: 123 ETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRFA 182

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           CE+GAI+A AS+ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 183 CEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTAD 223


>gi|15967020|ref|NP_387373.1| geranyltranstransferase protein [Sinorhizobium meliloti 1021]
 gi|307302488|ref|ZP_07582245.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C]
 gi|307316182|ref|ZP_07595626.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83]
 gi|15076293|emb|CAC47846.1| Probable geranyltranstransferase [Sinorhizobium meliloti 1021]
 gi|306898022|gb|EFN28764.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83]
 gi|306903158|gb|EFN33748.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C]
          Length = 304

 Score =  202 bits (513), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/232 (48%), Positives = 159/232 (68%), Gaps = 3/232 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
            P++L+ N+  ++ +L+ LL       +      LL A+R+ +L GGK++R FLV E  +
Sbjct: 8   FPARLKTNAVAVEALLETLLGPAVGTGEIARPANLLGAMRHGVLNGGKRLRPFLVAESTA 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   ALR GAA+ECIHCYSL+HDDLP+MD+  +RRGKPTVH+ +DE TAI+AG+ L
Sbjct: 68  LLGGDAEAALRTGAALECIHCYSLVHDDLPAMDDDDMRRGKPTVHVAFDEATAILAGDSL 127

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT+AF+I+++P+T L D  ++ L+L+L    G  GM GGQ LD+  E    DE  + ++Q
Sbjct: 128 LTFAFDIVAAPETALSDRQKTTLVLALARAAGHGGMAGGQALDLAAEKSAPDEAGIVLLQ 187

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            MKTGAL+ FACE+GAI+A A   ++ RLR FG+ +G+ FQLADDLLD   D
Sbjct: 188 SMKTGALIRFACEAGAIIADAPAEDRRRLRAFGDKIGLAFQLADDLLDLTAD 239


>gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
 gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
          Length = 321

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/233 (47%), Positives = 144/233 (61%), Gaps = 12/233 (5%)

Query: 13  SKRIDTILDD-------LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
           +KR+DT  +D       LL       +     RL+ AIRYA L GGK++R FL  E A++
Sbjct: 24  AKRLDTTAEDTEALLGRLLSDDLLPDEITRPRRLMEAIRYATLGGGKRLRPFLAVESAAV 83

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F V   +AL VGAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H  YD+ TAI+AG+ LL
Sbjct: 84  FGVERASALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDALL 143

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMI 180
           T+AF+II+  +      +R  L   L    GL GM+GGQ+LD+  E  F D     V  +
Sbjct: 144 TFAFDIITRDEVHRDPQVRLDLNRVLARCAGLGGMVGGQILDLAGEGRFGDREPVDVARL 203

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           Q+MKTGAL+ + C +GAI+  A       L  +G  LG  FQ+ADDLLD E D
Sbjct: 204 QQMKTGALLRYGCVAGAILGEAPPEHYRALDDYGRALGEAFQIADDLLDVEGD 256


>gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
 gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
          Length = 308

 Score =  199 bits (506), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/201 (51%), Positives = 134/201 (66%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ AIRY+ LGG K++R FL  E A++F V+   AL VGAA+ECIHCYSLIHDDLP+MD
Sbjct: 43  RLMEAIRYSTLGGGKRLRPFLAVESAAVFGVDRAGALLVGAALECIHCYSLIHDDLPAMD 102

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT+H  YD+ TAI+AG+ LLT AF+II+  +      +R  L   L    GL
Sbjct: 103 NSDLRRGRPTLHKAYDDATAILAGDALLTLAFDIITRDEVHQDAKVRLDLNRVLARCAGL 162

Query: 157 QGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQMLD+  E  F D     V  +Q+MKTGAL+ + C +GAI+  AS    + L  
Sbjct: 163 GGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASPEHYKALDD 222

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQ+ADDLLD E D
Sbjct: 223 YGRALGEAFQIADDLLDVEGD 243


>gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
 gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
          Length = 301

 Score =  199 bits (506), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/232 (46%), Positives = 145/232 (62%), Gaps = 3/232 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L + +   + RI+T LD LL  +      +   RLL+A+R+ +L GGK++R  LV 
Sbjct: 1   MTPDLKTHMAVQAIRIETRLDHLLGGSEFLESNKSPPRLLAAMRHGVLNGGKRLRPVLVL 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           ECA+L        L V  A+E IHCYSL+HDDLP+MDN  +RRGKPTVH  +DE T I+A
Sbjct: 61  ECAALLGRCDEGVLDVACALELIHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATGILA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
           G+ LLT AF++I          IR QL   L+   G+ GM GGQMLD+Q E  D T  ++
Sbjct: 121 GDALLTLAFDVIGQEAAHPDATIRLQLSRELSKASGVVGMAGGQMLDLQAEHCDRTEIEI 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +    MKTGAL+ +AC +GAI+A AS +  +RL  FG  +G+ FQ+ADDLLD
Sbjct: 181 YKFHAMKTGALLRYACRAGAILADASNDNIDRLTRFGTTIGLSFQIADDLLD 232


>gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
 gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
          Length = 308

 Score =  199 bits (505), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/231 (45%), Positives = 145/231 (62%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L   ++  + +L  LL       +     RL+ AIRY+ LGG K++R FL  E A++F 
Sbjct: 13  RLDSTAEDTEALLGRLLSDELMTDEIARPRRLMEAIRYSTLGGGKRLRPFLAVESAAVFG 72

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++   AL VGAA+ECIHCYSLIHDDLP+MD+  +RRG+PT+H  YD+ TAI+AG+ LLT+
Sbjct: 73  IDRDAALLVGAALECIHCYSLIHDDLPAMDDSDLRRGRPTLHKAYDDATAILAGDALLTF 132

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQK 182
           AF+I++  +      +R  L   L    GL GM+GGQMLD+  E  F D     V  +Q+
Sbjct: 133 AFDIVTRDEVHTDPTVRLMLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVAKLQQ 192

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ + C +GAI+  A+  +   L  +G  LG  FQ+ADDLLD E D
Sbjct: 193 MKTGALLRYGCVAGAILGQANAEQYRALDDYGRALGEAFQIADDLLDVESD 243


>gi|146337687|ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizobium sp. ORS278]
 gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
           (FPP synthase) [Bradyrhizobium sp. ORS278]
          Length = 306

 Score =  199 bits (505), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/231 (45%), Positives = 145/231 (62%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L + ++  + +L +LL       +     RL+ ++RY+ LGG K++R FLV E A++F 
Sbjct: 11  RLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFG 70

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H  YD+ TAI+AG+ LLT 
Sbjct: 71  VPRRGALMAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTI 130

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQK 182
           AF+II+  +      +R  L  +L    G+ GM GGQ+LD+  E      D   V  +Q+
Sbjct: 131 AFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVARVQQ 190

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ F C +GA++  AS  E + L  +G  LG  FQ+ADDLLD E D
Sbjct: 191 MKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEGD 241


>gi|218682196|ref|ZP_03529797.1| Polyprenyl synthetase [Rhizobium etli CIAT 894]
          Length = 304

 Score =  198 bits (504), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/230 (51%), Positives = 164/230 (71%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N+  I+ +LD LL       +    + L SA+ YA+L GGK++R FLV E A+LF
Sbjct: 10  TRLKHNAHEIEALLDILLSPATLSDEIARPETLRSAMHYAVLNGGKRMRPFLVVESAALF 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   ALRVGAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+ LLT
Sbjct: 70  GGDAGAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGDSLLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           YAF+II++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q M
Sbjct: 130 YAFDIIAAPETALPDTSKAALVLALARAAGLGGMAGGQALDLAAERQAPDEAGIIRLQAM 189

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GAI++  S +++ RLR FGE +G+ FQLADD+LD   D
Sbjct: 190 KTGALIRFACEAGAIISAGSPDDRLRLRAFGEKIGLAFQLADDILDLTSD 239


>gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 307

 Score =  198 bits (503), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/231 (45%), Positives = 146/231 (63%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L + ++  + +L +LL       +     RL+ ++RY+ LGG K++R FLV E A++F 
Sbjct: 12  RLDKTAEETEALLGELLGDAPLADEIARPQRLIESMRYSSLGGGKRLRPFLVVESAAVFG 71

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H  YD+ TAI+AG+ LLT 
Sbjct: 72  VPRKGALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTI 131

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQK 182
           AF+II+  +      +R  L  +L    G+ GM GGQ+LD+  E  F D     V  +Q+
Sbjct: 132 AFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDSGPVDVARVQQ 191

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ F C +GA++  AS  E + L  +G  LG  FQ+ADDLLD E D
Sbjct: 192 MKTGALLRFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGD 242


>gi|323137013|ref|ZP_08072093.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
 gi|322397774|gb|EFY00296.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
          Length = 310

 Score =  197 bits (502), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 106/231 (45%), Positives = 149/231 (64%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           +L + ++  +  LD LL       +     RLL A+RY +L GGK++R FLV E A LF 
Sbjct: 13  RLDQAAEATEAALDSLLAPAPLADEITRPARLLEAMRYVSLGGGKRLRPFLVIESARLFG 72

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V   +ALR   A+E IHCYSL HDDLP+MD+  +RRG+PT H  +DE TAI+AG+GLLTY
Sbjct: 73  VEGASALRTACALEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAGDGLLTY 132

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQK 182
           AF++++ P T    ++R  L+L+L    GL GM+GGQ LD+  E     + + +   +Q 
Sbjct: 133 AFDVVADPATHPDASLRVSLVLALARAAGLGGMVGGQALDLAAETAATPLSQAETMQMQA 192

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ FA ++G I+  A+  +K+ LR +GE LG  FQ+ADD+LD E D
Sbjct: 193 MKTGALLRFAVDAGGILGGAAPAQKKALRRYGEALGAAFQIADDILDAEGD 243


>gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 305

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 103/235 (43%), Positives = 142/235 (60%), Gaps = 13/235 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQT----------QHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
            ++R D++L D L++    +                RL  A+RY A+ GGK++R  LVT 
Sbjct: 6   TNQRPDSLLKDALVRIQQEVDACFDATLPVPEDPRARLYEAMRYSAIGGGKRLRPLLVTA 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            ASLF V+   A+RVG A+E IH YSLIHDD+P MDN  +R GKPTVH+ YD+ TA++AG
Sbjct: 66  VASLFGVDRSVAVRVGTALESIHVYSLIHDDMPCMDNDSLRHGKPTVHLAYDDATAVLAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + L   AFEI+S P       +R +L+ +L H  G+ GM+GGQM+DI  E    D   V 
Sbjct: 126 DALQALAFEILSDPDLVGDPFVRIELVRTLAHASGINGMVGGQMMDIAAETASFDLATVT 185

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +Q++KTGAL+  A E GAI+ H     +  LR +  N+G+ FQ+ DDLLD E D
Sbjct: 186 RLQQLKTGALLAAAVEMGAILGHVPPEGRTHLRGYARNIGLAFQIVDDLLDAEGD 240


>gi|312112938|ref|YP_004010534.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218067|gb|ADP69435.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 296

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 148/229 (64%), Gaps = 6/229 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L++++ R++  LD+ L   ++       DRLL A+RY  LGG K+ R FLV E A+LF 
Sbjct: 6   RLEDHASRVERHLDEWL---STDKLGAVPDRLLDAMRYGTLGGGKRFRPFLVIESAALFG 62

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V    AL  G+A+ECIHCYSL+HDDLP+MDN  +RRG+PTVH  +D+ TAI+AG+ LLT 
Sbjct: 63  VPVEKALNAGSALECIHCYSLVHDDLPAMDNDDLRRGRPTVHKAFDDATAILAGDTLLTV 122

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           AFEII+   T     +R+ L L L    G  GM GGQMLD+    + + E  +  +Q MK
Sbjct: 123 AFEIIAHESTHPNPAVRAALGLELARASGGAGMAGGQMLDLMAPGKMLGEADIRTLQAMK 182

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+ + C +G I+  AS+ E   L+ +G+ LG  FQLADDLLD E D
Sbjct: 183 TGALITYGCVAGGILGEASKAELAALKTYGDALGAAFQLADDLLDAEGD 231


>gi|220927127|ref|YP_002502429.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
 gi|219951734|gb|ACL62126.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
          Length = 337

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 97/234 (41%), Positives = 144/234 (61%), Gaps = 7/234 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
            P++L   +  ++  L++ L   A   +     RL+  +R+A+LGG K++R FL  E A 
Sbjct: 37  FPARLTAVADAVEGFLNERLGDAAGPGEITRPVRLMQGMRHAVLGGGKRLRPFLTIETAR 96

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +    +  AL  G+ IE +HCYSL+HDDLP+MDN  +RRGKPTVH  +DE TAI+ G+ L
Sbjct: 97  MLGGPYAGALAAGSGIELVHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATAILVGDAL 156

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQV 177
           LT+AFEI++ P  Q    +R++L+L L    GL GM+GGQ+LD+  E       +D    
Sbjct: 157 LTFAFEILADPVWQPDARVRAELVLGLARAAGLGGMVGGQLLDLGAEGRFGPANLDVDAT 216

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +Q MKTGAL+  + ++GAI+  A  +++  L  +G  LG  FQ+ADD+LD E
Sbjct: 217 LQLQAMKTGALLAVSVDAGAIVGGADPDQRAALLAYGRALGQAFQVADDILDRE 270


>gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
 gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
          Length = 305

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/203 (48%), Positives = 138/203 (67%), Gaps = 7/203 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R++ A+RYA L GGK++R FLV + A LF+V+   AL V AAIE IHCYSLIHDDLP+MD
Sbjct: 38  RVVDAMRYAALEGGKRLRPFLVLQSAQLFSVSRACALNVAAAIEMIHCYSLIHDDLPAMD 97

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PTVH QYDE TAI+AG+ LLT AFE+I+ P T     +R  L+  L    G 
Sbjct: 98  NDDLRRGRPTVHRQYDEPTAILAGDALLTKAFEVIALPGTHSDPAVRCDLVTELAIAAGA 157

Query: 157 QGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           +GM+GGQM+D+       D  +D   +  + ++KTG L+ F+  +GAI+  A +++++ L
Sbjct: 158 KGMVGGQMIDLMAERGLIDGALDVPAITRMHQLKTGRLISFSSIAGAILGKAPRSQRQAL 217

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +  +LG+ FQ+ADDLLD E D
Sbjct: 218 FNYAHDLGLAFQIADDLLDVEGD 240


>gi|298292712|ref|YP_003694651.1| polyprenyl synthetase [Starkeya novella DSM 506]
 gi|296929223|gb|ADH90032.1| Polyprenyl synthetase [Starkeya novella DSM 506]
          Length = 305

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/206 (49%), Positives = 136/206 (66%), Gaps = 10/206 (4%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            +RL SA+R+ AL GGK++R FLV E A+LF V    A+   AA+ECIHCYSL+HDDLP+
Sbjct: 33  GERLASAMRHGALAGGKRLRPFLVIESAALFGVPAAAAMPAAAALECIHCYSLVHDDLPA 92

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRG+PTVH  YDE TAI+AG+GLLT AFEI++  +      +R  L+ SL H  
Sbjct: 93  MDNDDLRRGQPTVHRAYDEATAILAGDGLLTLAFEILAREEAGPDAEVRIALVASLAHAA 152

Query: 155 GLQGMLGGQMLDIQDEF---------IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           G+ GM+GGQMLD+  E          +   ++  +Q MKTGAL+  ACE+GA++  A+  
Sbjct: 153 GVAGMIGGQMLDLAAEGRFASGRPLDLPAEEIIRLQAMKTGALLRQACEAGALVGRATPE 212

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E+  L  +   +G  FQ+ADDLLD E
Sbjct: 213 ERASLDRYARAVGRAFQIADDLLDVE 238


>gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
 gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
          Length = 296

 Score =  195 bits (496), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 98/197 (49%), Positives = 137/197 (69%), Gaps = 3/197 (1%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY  LGG K++R FLV E A LF VN   ALR  AA+E IHCYSL+HDDLP+MD
Sbjct: 33  RLFEAMRYGCLGGGKRLRPFLVMESARLFGVNPACALRAAAAVEFIHCYSLVHDDLPAMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT+H++YDE TAI+AG+ LLT AFEI++ P+T     +R +L+ +L    G 
Sbjct: 93  DSDLRRGRPTLHLEYDEATAILAGDALLTVAFEILADPETHEDAQVRCRLVSALAKAAGP 152

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+GGQMLD+  +D   D   +  +Q++KTG L+ F+  +GAI+  AS  +   L+ + 
Sbjct: 153 RGMVGGQMLDLMAEDRTFDIGAITRLQRLKTGELIAFSATAGAILGRASPPQHHALQAYA 212

Query: 215 ENLGIIFQLADDLLDCE 231
            +LG+ FQ+ADDLLD E
Sbjct: 213 HDLGLAFQIADDLLDVE 229


>gi|240851259|ref|YP_002972662.1| geranyltranstransferase [Bartonella grahamii as4aup]
 gi|240268382|gb|ACS51970.1| geranyltranstransferase [Bartonella grahamii as4aup]
          Length = 300

 Score =  194 bits (494), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/220 (50%), Positives = 153/220 (69%), Gaps = 7/220 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KR+DT+L D +     + +      L+ A+RY +L GGK++R FLV + A+LF++    +
Sbjct: 17  KRLDTLLSDQI----QNGEISRPKNLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVEYS 72

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L V  A+ECIHCYSLIHDDLP+MDN  +RRGKPTVHI +DE TAI+AGN LLT+AFEII+
Sbjct: 73  LDVACALECIHCYSLIHDDLPAMDNDILRRGKPTVHIAFDEATAILAGNALLTFAFEIIA 132

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMC 190
              + L  +IR +L+ SL  + GL GMLGGQMLD++ E   +  + +  +Q MKT AL+ 
Sbjct: 133 HKASTLSTDIRIKLITSLAQSAGLGGMLGGQMLDLEAEKKPQGSSDIITLQHMKTAALIS 192

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           FAC++GAI+ +AS+   E+L  FG  LG+ FQL DDLLD 
Sbjct: 193 FACQAGAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDV 232


>gi|227823787|ref|YP_002827760.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii
           NGR234]
 gi|227342789|gb|ACP27007.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii
           NGR234]
          Length = 360

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/232 (48%), Positives = 162/232 (69%), Gaps = 3/232 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
            P +L+  +  ++++L +LL  +A   +     +LL A+R+ +L GGK++R FLV E  +
Sbjct: 64  FPERLKAAALAVESLLSNLLGPSAQADEIARPAQLLDAMRHGVLNGGKRLRPFLVAESTA 123

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 124 LLGGSADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSL 183

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
           LT+AF+I+++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q
Sbjct: 184 LTFAFDIVAAPETPLSDGQKTALVLALARAAGLGGMAGGQALDLAAEKTAPDEAAIVTLQ 243

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            MKTGAL+ FACE+GAI+A A   ++ RLR FGE +G+ FQLADDLLD   D
Sbjct: 244 AMKTGALIRFACEAGAIIADAGLEDRRRLRAFGEKIGLAFQLADDLLDLTAD 295


>gi|217977003|ref|YP_002361150.1| Polyprenyl synthetase [Methylocella silvestris BL2]
 gi|217502379|gb|ACK49788.1| Polyprenyl synthetase [Methylocella silvestris BL2]
          Length = 309

 Score =  192 bits (488), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/231 (44%), Positives = 144/231 (62%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L+  +  ++T+LD LL  +    +     RLL AIRY+ LGG K++R FL+ E A LF 
Sbjct: 12  RLKTAADAVETMLDRLLGPSPLAGEIARPGRLLEAIRYSSLGGGKRLRPFLLIETARLFG 71

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V      R  AA+E IHCYSL+HDDLP++DN  +RRG+ T H  YDE TAI+ G+GLLTY
Sbjct: 72  VEGEGVTRAAAAVEMIHCYSLVHDDLPALDNDDLRRGRATTHKAYDEATAILVGDGLLTY 131

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----VFMIQK 182
           AF++++ P T     IR++L+L+L    G  GM+GGQ+LD++ E          V  +Q 
Sbjct: 132 AFDVLADPATHADPAIRAELVLALARAAGFGGMIGGQVLDLEAEQSTAPHTAEAVIRLQS 191

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ F+  +GAI+  A    +  L  +G  LG  FQ+ADD+LD E D
Sbjct: 192 MKTGALLHFSVLAGAIIGAADAKARAALSAYGHALGAAFQVADDILDVEAD 242


>gi|163869177|ref|YP_001610429.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
 gi|161018876|emb|CAK02434.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
          Length = 301

 Score =  191 bits (486), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/222 (49%), Positives = 151/222 (68%), Gaps = 13/222 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           R+ T+L D       H+Q     R   L+ A+RY +L GGK++R FLV + A+LF++   
Sbjct: 18  RLSTLLSD-------HIQNGEISRPENLIKAMRYGVLNGGKRLRPFLVIQSAALFDIPVE 70

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +L V  A+EC+HCYSLIHDDLP+MDN  +RRGKPTVH+++DE TAI+AGN LLT+AFEI
Sbjct: 71  HSLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTVHVEFDEATAILAGNALLTFAFEI 130

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGAL 188
           I+     L  + R +L+ +L  + GL GMLGGQMLD++ E    + T +  +Q+MKT AL
Sbjct: 131 IAHKANTLSTDTRIKLITALAQSAGLGGMLGGQMLDLEAEKKPQENTDIITLQRMKTAAL 190

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           + FAC++GAI+ +ASQ    +L  FG  LG+ FQL DDLLD 
Sbjct: 191 ISFACQAGAIIGNASQELLTKLTAFGSYLGLAFQLTDDLLDV 232


>gi|85713667|ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
 gi|85699571|gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
          Length = 308

 Score =  191 bits (485), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/243 (44%), Positives = 150/243 (61%), Gaps = 10/243 (4%)

Query: 1   MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54
           M  GL S     +L   +   + +L+ LL       +     RL+ A+RY+ LGG K++R
Sbjct: 1   MTSGLSSADFAKRLDSTADETEALLEKLLSDAPLPDEIARPKRLMDAMRYSSLGGGKRLR 60

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            FLV E +++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H   D+ 
Sbjct: 61  PFLVVESSAVFGVAREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDA 120

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FI 172
           TAI+AG+GLLT AF+II+  +      +R  L  +L    G+ GM+GGQ+LD+  E  F 
Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHQDPTVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFG 180

Query: 173 DE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           D     V  +Q+MKTGAL+ F C +GA++  ASQ + + L  +G  LG  FQ+ADDLLD 
Sbjct: 181 DRGPVDVARVQQMKTGALLRFGCIAGALLGQASQEDYQALDTYGRALGEAFQIADDLLDV 240

Query: 231 EED 233
           E D
Sbjct: 241 EGD 243


>gi|90422021|ref|YP_530391.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
 gi|90104035|gb|ABD86072.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
          Length = 308

 Score =  191 bits (484), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 103/201 (51%), Positives = 136/201 (67%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ AIRY+ L GGK++R FLV E A++F V    AL  GAA+ECIHCYSLIHDDLP+MD
Sbjct: 43  RLMEAIRYSSLAGGKRLRPFLVVESAAVFGVPRGAALLAGAALECIHCYSLIHDDLPAMD 102

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT+H  YD+ TAI+AG+ LLT AF+II+  +      +R  L  +L    G+
Sbjct: 103 NSELRRGRPTLHRAYDDATAILAGDALLTLAFDIITRDEIHSDAGVRLALTRALARASGI 162

Query: 157 QGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQMLD+  E  F D     V  +Q+MKTGAL+ F C +GAI+  A++ + + L  
Sbjct: 163 GGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCIAGAILGQATKEQTKALDD 222

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQ+ADDLLD E D
Sbjct: 223 YGRALGEAFQIADDLLDVEGD 243


>gi|115522205|ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
 gi|115516152|gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
          Length = 308

 Score =  190 bits (483), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/201 (52%), Positives = 136/201 (67%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ AIRY+ LGG K++R FLV E A++F V    AL VGAA+ECIHCYSLIHDDLPSMD
Sbjct: 43  RLMEAIRYSTLGGGKRLRPFLVVESAAVFGVPRAAALLVGAALECIHCYSLIHDDLPSMD 102

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT+H  YD+ TAI+AG+ LLT AF+IIS  +      +R  L  +L    G+
Sbjct: 103 NSDLRRGRPTLHKAYDDATAILAGDALLTLAFDIISRDEIHPDAKVRLLLTRALARASGI 162

Query: 157 QGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQMLD+  E  F D     V  +Q+MKTGAL+ F C +GA++  AS  + + L  
Sbjct: 163 GGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCIAGALLGQASPQQYQALDD 222

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQ+ADDLLD E D
Sbjct: 223 YGRALGEAFQIADDLLDVEGD 243


>gi|296533686|ref|ZP_06896240.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
 gi|296265985|gb|EFH12056.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
          Length = 300

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 147/237 (62%), Gaps = 12/237 (5%)

Query: 1   MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
           M G  P  + L+E +  I+  LD LL Q     +     +L +A+RY++LGG K++R FL
Sbjct: 1   MTGDTPLSAALREAAAEIEHTLDMLLPQ-----EEGPEAKLYAAMRYSVLGGGKRMRGFL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V E A+ F V+ ++ALRV AAIE +H YSL+HDDLP+MDN  +RRGKPT H  Y E TAI
Sbjct: 56  VLEGAAQFGVSRVSALRVAAAIEMLHAYSLVHDDLPAMDNDELRRGKPTTHRAYGEATAI 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFID 173
           +AG+ L  +AF +++   T     +R++L L L    G +GM GGQMLD+      E + 
Sbjct: 116 LAGDALQAHAFAVLAGEDTHSDPAVRAELCLRLALAAGSKGMCGGQMLDMLAEEATEALS 175

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           E+ +  +Q +KTG L+ F+ E+GA++  A   ++  L  +G  LG  FQ+ADD+LD 
Sbjct: 176 ESAIGRLQLLKTGKLIEFSAEAGAVLGKAPGPQRHALCAYGRELGAAFQIADDILDA 232


>gi|39933601|ref|NP_945877.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009]
 gi|39647447|emb|CAE25968.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
           [Rhodopseudomonas palustris CGA009]
          Length = 308

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/231 (46%), Positives = 146/231 (63%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L   ++  + +L  LL       +     RL+ AIRY+ LGG K++R FL  E A++F 
Sbjct: 13  RLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVESAAVFG 72

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++   AL VGAA+ECIHCYSLIHDDLPSMDN  +RRG+PT+H  YD+ TAI+AG+ LLT+
Sbjct: 73  IDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDALLTF 132

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQK 182
           AF+I++  +      +R  L   L    GL GM+GGQMLD+  E  F D     V  +Q+
Sbjct: 133 AFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQ 192

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ + C +GAI+  AS ++   L  +G  LG  FQ+ADDLLD E D
Sbjct: 193 MKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGD 243


>gi|110635757|ref|YP_675965.1| farnesyl-diphosphate synthase [Mesorhizobium sp. BNC1]
 gi|110286741|gb|ABG64800.1| farnesyl-diphosphate synthase [Chelativorans sp. BNC1]
          Length = 305

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/226 (49%), Positives = 156/226 (69%), Gaps = 3/226 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S L  N++ ++ +L  LL +     +      LL+A+R+ +L GGK++R FLV E A+LF
Sbjct: 11  SLLALNAQSVEDLLRHLLDERVREGEILRPSHLLAAMRHGVLNGGKRLRPFLVLESAALF 70

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
               + +LRV AA+EC+HCYSLIHDDLP+MD+  +RRG+PTVH  +DE TAI+AG+ LLT
Sbjct: 71  EAQGMASLRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHRAFDEATAILAGDSLLT 130

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKM 183
           YAF+II+  +T L+  IR+ L++ L    G+ GM GGQ LD+  E +  DE  +  +Q M
Sbjct: 131 YAFDIIADAETDLRPEIRADLVVKLATAAGMGGMAGGQALDLLAEKVPPDEVGIVQLQAM 190

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTGAL  FACE+GAI+A AS  ++ER+  FG  +G+ FQLADDLLD
Sbjct: 191 KTGALFRFACEAGAIVADASSADRERMSSFGAAIGLAFQLADDLLD 236


>gi|192288955|ref|YP_001989560.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192282704|gb|ACE99084.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 308

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/231 (46%), Positives = 146/231 (63%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L   ++  + +L  LL       +     RL+ AIRY+ LGG K++R FL  E A++F 
Sbjct: 13  RLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVESAAVFG 72

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++   AL VGAA+ECIHCYSLIHDDLPSMDN  +RRG+PT+H  YD+ TAI+AG+ LLT+
Sbjct: 73  IDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDALLTF 132

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQK 182
           AF+I++  +      +R  L   L    GL GM+GGQMLD+  E  F D     V  +Q+
Sbjct: 133 AFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQ 192

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ + C +GAI+  AS ++   L  +G  LG  FQ+ADDLLD E D
Sbjct: 193 MKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGD 243


>gi|75674693|ref|YP_317114.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74419563|gb|ABA03762.1| farnesyl-diphosphate synthase [Nitrobacter winogradskyi Nb-255]
          Length = 308

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/243 (44%), Positives = 149/243 (61%), Gaps = 10/243 (4%)

Query: 1   MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIR 54
           M  GL S     +L   +   + +L+ LL       +     RL  A+RY+ LGG K++R
Sbjct: 1   MTSGLSSADFAIRLDTTADETEAVLEKLLSDAPLPDEIARPRRLTDAMRYSSLGGGKRLR 60

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            FLV E +++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H   D+ 
Sbjct: 61  PFLVVESSAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDA 120

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FI 172
           TAI+AG+GLLT AF+II+  +      +R  L  +L    G+ GM+GGQ+LD+  E  F 
Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHDDPAVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFG 180

Query: 173 DE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           D     V  +Q+MKTGAL+ F C +GA++  ASQ + + L  +G  LG  FQ+ADDLLD 
Sbjct: 181 DRGPVDVARVQQMKTGALLRFGCIAGALLGQASQKDYQALDAYGRALGEAFQIADDLLDV 240

Query: 231 EED 233
           E D
Sbjct: 241 ESD 243


>gi|90420298|ref|ZP_01228206.1| putative geranyltranstransferase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335632|gb|EAS49382.1| putative geranyltranstransferase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 300

 Score =  189 bits (480), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/199 (53%), Positives = 138/199 (69%), Gaps = 4/199 (2%)

Query: 38  RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RLL+A+R+ AL GGK++R FLV E A LF  +   A+    A+ECIHCYSL+HDDLPSMD
Sbjct: 38  RLLAAMRHGALGGGKRLRPFLVIESARLFGADLQAAIGAATALECIHCYSLVHDDLPSMD 97

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH  YDE TAI+AG+GLLT AF +++  +  L    R  L+  L  + G 
Sbjct: 98  DDDLRRGKPTVHRAYDEATAILAGDGLLTLAFGLVAG-EEGLSPKARVALVALLARDAGA 156

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ+LD+  E   + E ++  +Q MKTGAL+ FACE+GAI+A A   E+ RLR FG
Sbjct: 157 AGMVGGQVLDLAAENAVLSEDEIARMQAMKTGALIAFACEAGAIVADAGAAERARLRRFG 216

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G+ FQLADDLLD   D
Sbjct: 217 EIVGLAFQLADDLLDETAD 235


>gi|182677419|ref|YP_001831565.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633302|gb|ACB94076.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 310

 Score =  189 bits (479), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/231 (45%), Positives = 147/231 (63%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L + ++  +  LD LL  +    +T    R L A+RYA LGG K++R FL+ E A LF 
Sbjct: 13  RLTQIAEATEKTLDHLLGPSPLPGETLRPPRFLEAMRYASLGGGKRLRPFLLVETARLFG 72

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +     LR  +A+E IHCYSL+HDDLP++DN  +RRG+PT H  YDE TAI+ G+GLLTY
Sbjct: 73  IEGEGVLRAASALEMIHCYSLVHDDLPALDNDDLRRGRPTTHKAYDEATAILVGDGLLTY 132

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----VFMIQK 182
           AF++++ P T     IR +L+L+L    G+ GM+GGQ+LDI+ E          V  +Q 
Sbjct: 133 AFDVLADPATHKDPAIRIELVLALARAAGVGGMVGGQVLDIEAEQAKTPHTAEAVIELQS 192

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ +A  +GAI A  S+  +E L  +G+ LG  FQ+ADD+LD E D
Sbjct: 193 MKTGALLHYAVIAGAIFAGVSKQTREALSAYGQALGAAFQVADDILDVEAD 243


>gi|222150203|ref|YP_002551160.1| geranyltranstransferase [Agrobacterium vitis S4]
 gi|221737185|gb|ACM38148.1| geranyltranstransferase [Agrobacterium vitis S4]
          Length = 283

 Score =  189 bits (479), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/199 (57%), Positives = 149/199 (74%), Gaps = 3/199 (1%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +LL+A+R+A+L GGK++R FLV E A LF+     ALRVGAA+EC+HCYSL+HDDLP+MD
Sbjct: 20  QLLAAMRHAVLNGGKRLRPFLVVESARLFHGQDDAALRVGAALECLHCYSLVHDDLPAMD 79

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVHI +DE TAI+AG+ LLT+AFEII+SP+T L D  ++ L+L+L    GL
Sbjct: 80  DDDLRRGQPTVHIAFDEATAILAGDSLLTFAFEIIASPQTTLPDAAKTALVLALARAAGL 139

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM GGQ LD+  E    DE  +  +Q MKTGAL+ FACE+G ++A AS  ++ERLR FG
Sbjct: 140 GGMAGGQALDLAAEKHAPDEVGIVTLQAMKTGALLRFACEAGPVIAGASNEDRERLRQFG 199

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G  FQLADDLLD   D
Sbjct: 200 ELIGRAFQLADDLLDLTAD 218


>gi|27376057|ref|NP_767586.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110]
 gi|27349196|dbj|BAC46211.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110]
          Length = 307

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/245 (45%), Positives = 150/245 (61%), Gaps = 15/245 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDD-------LLLQTASHMQTQHNDRLLSAIRYALL-GGKK 52
           M G  PS     +KR+D   DD       LL       +     RL+ A+RY+ L GGK+
Sbjct: 1   MTGTSPSDF---AKRLDKTADDTEALLGRLLADDILPDEIARPKRLMDAMRYSSLNGGKR 57

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R FLV E A++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H + D
Sbjct: 58  LRPFLVVESAAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKKTD 117

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           + TAI+AG+GLLT AF+I++  +     N+R  L  +L    G+ GM+GGQ+LD+  E  
Sbjct: 118 DATAILAGDGLLTLAFDIVTRDEIHRDANVRLLLTRALARCAGIGGMVGGQILDLAGEGR 177

Query: 173 ----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
               +   V  IQ+MKTGAL+ + C +GAI+  A+  E + L  +G  LG  FQ+ADDLL
Sbjct: 178 FGGNEPIDVARIQQMKTGALLRYGCIAGAILGQATAKEYQALDDYGRALGEAFQIADDLL 237

Query: 229 DCEED 233
           D E D
Sbjct: 238 DVEGD 242


>gi|260752677|ref|YP_003225570.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552040|gb|ACV74986.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 298

 Score =  187 bits (476), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ A+RYA +GG K++R  LV    +LFNV+   ALRVG AIECIH YSLIHDD+P MD
Sbjct: 33  RLVEAMRYAAIGGGKRLRPLLVAATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPTVH  +D+ +A+++G+ L   AFEI+S  K     ++R +L+ +L    G 
Sbjct: 93  NDDLRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALAIASGK 152

Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQ +D+  E      D   +  +Q++KTGAL  F  E+GAIM   +++ ++RL+ 
Sbjct: 153 DGMVGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKA 212

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +  ++G+ FQ+ADDL+D E D
Sbjct: 213 YARDIGLAFQIADDLIDAEGD 233


>gi|56551751|ref|YP_162590.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762408|ref|ZP_04760487.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|56543325|gb|AAV89479.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373095|gb|EER62744.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 298

 Score =  187 bits (476), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ A+RYA +GG K++R  LV    +LFNV+   ALRVG AIECIH YSLIHDD+P MD
Sbjct: 33  RLVEAMRYAAIGGGKRLRPLLVVATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPTVH  +D+ +A+++G+ L   AFEI+S  K     ++R +L+ +L    G 
Sbjct: 93  NDDLRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALAIASGK 152

Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQ +D+  E      D   +  +Q++KTGAL  F  E+GAIM   +++ ++RL+ 
Sbjct: 153 DGMVGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKA 212

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +  ++G+ FQ+ADDL+D E D
Sbjct: 213 YARDIGLAFQIADDLIDAEGD 233


>gi|319781104|ref|YP_004140580.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166992|gb|ADV10530.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 305

 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/228 (49%), Positives = 155/228 (67%), Gaps = 3/228 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +  ++ +L  LL   A   +    DRL++A+R+ +L GGK++R FLV E A+LF+ 
Sbjct: 13  LIRRAAAVEVLLRRLLDDRALSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESAALFSA 72

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   ALRV AA+EC+HCYSLIHDDLP+MD+  +RRG+PTVH  +DE TAI+AG+ LLT A
Sbjct: 73  DGEAALRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDALLTLA 132

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           F+II+   T L    R+ L+L+L    G  GM+GGQ LD++ E    DE  +  +Q MKT
Sbjct: 133 FDIIAGESTALPAERRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIIRLQAMKT 192

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+ FACE+GA++A A  +++ERL  FG  +G+ FQLADDLLD   D
Sbjct: 193 GALIRFACEAGALIAGAPADDRERLAEFGSAIGLAFQLADDLLDLTGD 240


>gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
 gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
          Length = 301

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/230 (46%), Positives = 149/230 (64%), Gaps = 3/230 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S L   + RI+T L  LL +T    +    +RL++A+R+ AL GGK++R  LV + A 
Sbjct: 5   LKSHLAAQAGRIETALTSLLKETERDGEISRPERLINAMRHGALNGGKRLRPVLVMDAAG 64

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF       ++ G A+E IHCYSL+HDDLP+MD+  +RRG+PTVH  YD+ TAI+AG+ L
Sbjct: 65  LFGRADDGVVQAGCALELIHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDDATAILAGDAL 124

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQ 181
           LT AF++I+      +  IR +L   L    G+ GM GGQMLD++ E  D  E ++  +Q
Sbjct: 125 LTLAFDVITDEAVHPEAGIRLRLCRELARASGIGGMAGGQMLDLESEHRDRSEAEIRHLQ 184

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            MKTGAL+ +AC +GAI+  AS  + ERL  FGE +G+ FQLADDLLD E
Sbjct: 185 SMKTGALLRYACRAGAILGDASDADVERLTRFGEIIGLAFQLADDLLDVE 234


>gi|325294094|ref|YP_004279958.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium
           sp. H13-3]
 gi|325061947|gb|ADY65638.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium
           sp. H13-3]
          Length = 324

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/230 (48%), Positives = 159/230 (69%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +KL++N+ + +++L  LL   A   +      LL A+R+ +L GGK++R FLV E  +L 
Sbjct: 30  TKLRDNAAQTESLLGRLLSAEARADEITRPQNLLDAMRHGVLNGGKRLRPFLVIESTALL 89

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             N   A  VGAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVH ++DE TAI+AG+ LLT
Sbjct: 90  GGNAEAAHHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLT 149

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
            AF+II+S +  L+ + ++ L+LSL    G+ GM GGQ LD+  E    DE  +  +Q M
Sbjct: 150 LAFDIIASDENPLEADRKAALVLSLARAAGIGGMAGGQALDLAAEKNAPDEAGIITLQAM 209

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GAI+A +  +E++RLR FGE +G+ FQLADDLLD   D
Sbjct: 210 KTGALLRFACEAGAIIAGSDVSERQRLRLFGEKIGLAFQLADDLLDLTAD 259


>gi|319409361|emb|CBI83005.1| geranyltranstransferase [Bartonella schoenbuchensis R1]
          Length = 300

 Score =  185 bits (469), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/225 (48%), Positives = 151/225 (67%), Gaps = 3/225 (1%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L +++  I+  LD LL   A + +    + L+ A+R+  L GGK++R FLV + A+LF++
Sbjct: 8   LAKHTHNIEKRLDTLLNYKAQNNEIARPEILIKAMRHGTLNGGKRLRPFLVIQSAALFDI 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +L +G A+EC+HCYSLIHDDLP+MDN  +RRGKPTVH  ++E TAI+AGN LLT A
Sbjct: 68  PLEQSLDIGVALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFNEATAILAGNALLTLA 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           FEII+     L   IR  L+ +L    GL GMLGGQMLD++ E    D   +  +Q MKT
Sbjct: 128 FEIIAHKACALSPQIRIDLITALAQAAGLGGMLGGQMLDLEAENKPQDHHAIITLQHMKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AL+ FAC++GAI+ +AS+ + ++L  FG +LG+ FQL DDLLD 
Sbjct: 188 AALISFACQAGAIIGNASKTQIDQLSTFGTHLGLAFQLTDDLLDV 232


>gi|6466227|gb|AAF12843.1|AF203881_16 geranyltransferase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 298

 Score =  185 bits (469), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 91/201 (45%), Positives = 133/201 (66%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ A+RYA +GG K++R  LV    +LFNV+   ALRVG AIECIH YSLIHDD+P MD
Sbjct: 33  RLVEAMRYAAIGGGKRLRPLLVVATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPTVH  +D+ +A+++G+ L   AFEI+S  K     ++R +L+ +L      
Sbjct: 93  NDDLRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALLSPPVK 152

Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQ +D+  E      D   +  +Q++KTGAL  F  E+GAIM   +++ ++RL+ 
Sbjct: 153 DGMVGGQAIDLAAETSTVPFDLPTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKA 212

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +  ++G+ FQ+ADDL+D E D
Sbjct: 213 YARDIGLAFQIADDLIDAEGD 233


>gi|209883275|ref|YP_002287132.1| geranyltranstransferase [Oligotropha carboxidovorans OM5]
 gi|209871471|gb|ACI91267.1| geranyltranstransferase [Oligotropha carboxidovorans OM5]
          Length = 312

 Score =  184 bits (468), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/230 (45%), Positives = 146/230 (63%), Gaps = 5/230 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +   + +LD LL +     + +   RL+ A+RY+ L GGK++R FLV   A++FNV
Sbjct: 18  LDATAADTEALLDRLLSERPEQGEIERPHRLIEAMRYSSLNGGKRLRPFLVVASAAIFNV 77

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL  GAA+ECIHCYSLIHDDLPSMDN  +RRG+PT H ++DE TAI+AG+ LLT A
Sbjct: 78  PREGALMAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDEATAILAGDSLLTLA 137

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQKM 183
           F+II+  +      +R  L  +L    G+ GM GGQ++D+  E  F D+    V  +Q+M
Sbjct: 138 FDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVAKLQQM 197

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ + C +GA++  AS+++   L  +G   G  FQ+ADDLLD E D
Sbjct: 198 KTGALLKYGCIAGALLGQASKDQYAALDAYGHAFGEAFQIADDLLDVEGD 247


>gi|15889973|ref|NP_355654.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58]
 gi|15157936|gb|AAK88439.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58]
          Length = 304

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/230 (48%), Positives = 156/230 (67%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+EN+ + + +L  LL   A   +      LL A+R+ +L GGK++R FLV E  +L 
Sbjct: 10  TRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALL 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +    L VGAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVH ++DE TAI+AG+ LLT
Sbjct: 70  GGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
            AF+II+S    L    ++ L++SL    G+ GM GGQ LD+  E    DE  +  +Q M
Sbjct: 130 LAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGIITLQAM 189

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD   D
Sbjct: 190 KTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTAD 239


>gi|87200267|ref|YP_497524.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135948|gb|ABD26690.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 303

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/201 (46%), Positives = 128/201 (63%), Gaps = 3/201 (1%)

Query: 36  NDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            DRL+ A+RYA +GG K++R  LV    +L  V+   A+RVG AIE IH YSLIHDDLP 
Sbjct: 38  RDRLVEAMRYAAIGGGKRLRPLLVCATGALHGVSREAAVRVGTAIEAIHVYSLIHDDLPC 97

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +R GKPTVH+ +D+ TA++AG+ L  +AFE++S P T      R +L+ +L    
Sbjct: 98  MDNDGLRHGKPTVHVAFDDATAVLAGDALHDFAFEVLSDPATSGDPFTRIELIRTLATAS 157

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G+ GM GGQM+DI  E    D   V  +Q++KTGAL+  + E GAI+       +  LR 
Sbjct: 158 GMNGMCGGQMMDIVAETSSFDLPTVTRLQQLKTGALLGASVELGAILGKVPPEGRTHLRG 217

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +  ++G+ FQ+ADDLLD E D
Sbjct: 218 YARDIGLAFQIADDLLDAEGD 238


>gi|110590588|pdb|2H8O|A Chain A, The 1.6a Crystal Structure Of The Geranyltransferase From
           Agrobacterium Tumefaciens
          Length = 335

 Score =  183 bits (465), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/230 (48%), Positives = 156/230 (67%), Gaps = 3/230 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+EN+ + + +L  LL   A   +      LL A+R+ +L GGK++R FLV E  +L 
Sbjct: 41  TRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESVALL 100

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +    L VGAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVH ++DE TAI+AG+ LLT
Sbjct: 101 GGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDSLLT 160

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
            AF+II+S    L    ++ L++SL    G+ GM GGQ LD+  E    DE  +  +Q M
Sbjct: 161 LAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGIITLQAM 220

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD   D
Sbjct: 221 KTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTAD 270


>gi|330814378|ref|YP_004358617.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327487473|gb|AEA81878.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 293

 Score =  182 bits (461), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 97/208 (46%), Positives = 132/208 (63%), Gaps = 4/208 (1%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q + N+ L  A+ Y L  GGKKIRS+L      LF++   TA+ V AAIEC+H YSLIHD
Sbjct: 25  QQKQNNELFEAMGYGLFAGGKKIRSYLTVAAFDLFDIKEETAIAVAAAIECVHSYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLPSMDN   RRGK + H ++ E TAI+AGN LLT AFEI++S    L   ++S L+ +L
Sbjct: 85  DLPSMDNDDFRRGKESTHKKFGESTAILAGNSLLTIAFEILTSNHLNLDKEVKSDLVFAL 144

Query: 151 THNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G  G+ GGQ LD+  + +  DE  +  +Q  KTG LM F  E+ AI+A  + N++E
Sbjct: 145 ASCSGHLGIAGGQFLDLSFEGKAQDEKTIIHMQNKKTGELMGFCTEAAAIVAKKN-NDRE 203

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L+  G ++G++FQ+ADDLLD   D  K
Sbjct: 204 ELKKIGLDIGLLFQIADDLLDVYGDQNK 231


>gi|300024283|ref|YP_003756894.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526104|gb|ADJ24573.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 301

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/201 (47%), Positives = 128/201 (63%), Gaps = 7/201 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+R+A+L GGK+ R FLV E A LF V    AL   AA+ECIHCYSL+HDDLP+MD
Sbjct: 34  RLADALRHAVLAGGKRFRPFLVFESAGLFGVARDAALPAAAALECIHCYSLVHDDLPAMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PTV   YDE TAI+ G+ L   AFE+ S P+       R++L  +L    G 
Sbjct: 94  NDELRRGQPTVWKAYDEWTAILVGDALQAIAFELTSDPRRHDDAEARAELTHALAIASGA 153

Query: 157 QGMLGGQMLDIQDEFIDE------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            GM+GGQMLD++   + +        +  +Q MKTG L+   CE GAI+  AS +++  L
Sbjct: 154 IGMVGGQMLDLEAGRLPDQPAATIADIVRLQAMKTGRLITVGCEMGAILGRASPSDRAAL 213

Query: 211 RCFGENLGIIFQLADDLLDCE 231
           + +GE+LG  FQ++DDLLD E
Sbjct: 214 KTYGEHLGTAFQISDDLLDAE 234


>gi|254472285|ref|ZP_05085685.1| geranyltranstransferase [Pseudovibrio sp. JE062]
 gi|211958568|gb|EEA93768.1| geranyltranstransferase [Pseudovibrio sp. JE062]
          Length = 301

 Score =  179 bits (454), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/236 (44%), Positives = 146/236 (61%), Gaps = 3/236 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L S + E ++ ++  L  LL +     +    +RLL A+ YA L GGK++R  L+ 
Sbjct: 1   MSVALKSVITETAQSLEEKLTSLLGEKVLPQEVARPERLLEAMNYAALSGGKRLRPVLMV 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A LF       L   +A+ECIHCYSL HDDLP+MD+  +RRG+PT H  +DE TAI+A
Sbjct: 61  EAARLFGHEDEGTLVAASALECIHCYSLAHDDLPAMDDDDLRRGRPTTHKAFDEATAILA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
           G+ LLT AF+ I+  +      IR +L   L    G+ GM GGQMLD+  E  D  E ++
Sbjct: 121 GDALLTIAFDFIADEQVHPDAAIRLRLSQELARASGIGGMAGGQMLDLASEHRDRTEAEI 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +Q MKTGAL+ +AC +GAI+A+AS ++  RL  FGE +G+ FQLADDLLD   D
Sbjct: 181 RQLQAMKTGALIRYACRAGAILANASDDDIARLTRFGEIIGLAFQLADDLLDLTGD 236


>gi|299132868|ref|ZP_07026063.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
 gi|298593005|gb|EFI53205.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
          Length = 312

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/230 (43%), Positives = 143/230 (62%), Gaps = 5/230 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   +   + +LD LL +     +     RL+ A+RY+ L GGK++R FL    A++F+V
Sbjct: 18  LDATAADTEALLDRLLSERPEQGEILRPKRLIEAMRYSSLNGGKRLRPFLAVASAAMFDV 77

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL  GAA+ECIHCYSLIHDDLPSMDN  +RRG+PT H ++D+ TAI+AG+ LLT A
Sbjct: 78  PRQGALLAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDDATAILAGDSLLTLA 137

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQKM 183
           F+II+  +      +R  L  +L    G+ GM GGQ++D+  E  F D+    V  +Q+M
Sbjct: 138 FDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVAKLQQM 197

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ + C +GA++  AS+ +   L  +G   G  FQ+ADDLLD E D
Sbjct: 198 KTGALLKYGCIAGALLGQASKEQYAALDAYGHAFGEAFQIADDLLDVEGD 247


>gi|118591313|ref|ZP_01548711.1| geranyltranstransferase [Stappia aggregata IAM 12614]
 gi|118435985|gb|EAV42628.1| geranyltranstransferase [Stappia aggregata IAM 12614]
          Length = 301

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/223 (45%), Positives = 143/223 (64%), Gaps = 3/223 (1%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
            +K ++  L+ LL   A   +     RLL+A+R+ AL GGK++R  LV E A+LF     
Sbjct: 12  QAKFVEATLETLLADQALPGEQVRPPRLLAAMRHGALNGGKRLRPVLVMETANLFGRADD 71

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L+   A+E +HCYSL+HDDLP+MD+  +RRG+PTVH  YDE TAI+AG+ LLT AF++
Sbjct: 72  GVLQAACALELVHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDEATAILAGDALLTLAFDV 131

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGAL 188
           I+         +R +L   L    G  GM GGQMLD++ E  +  E ++  +Q MKTGAL
Sbjct: 132 ITGEAVHADAAVRLRLSRELARASGFGGMAGGQMLDLESEHRERTEAEIRQLQSMKTGAL 191

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + +AC +GAI+A A + + +RL  FGE +G+ FQLADDLLD E
Sbjct: 192 LRYACRAGAILADAPEADIDRLTRFGEVIGLAFQLADDLLDVE 234


>gi|170744677|ref|YP_001773332.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
 gi|168198951|gb|ACA20898.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
          Length = 290

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/223 (43%), Positives = 136/223 (60%), Gaps = 7/223 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74
           ++  LD+ L       +     RL+ A+R+A+LGG K++R FL  E A L    +  AL 
Sbjct: 1   MEVFLDERLGDATGPGEITRPPRLMQAMRHAVLGGGKRLRPFLTIETARLLGGPYPGALA 60

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            G  IE +HCYSL+HDDLP+MD+  +RRGKPTVH  +DE TAI+AG+ LLT AFE+++ P
Sbjct: 61  AGGGIELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAFDEATAILAGDALLTLAFELLADP 120

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTGAL 188
             Q    IR+ L+L L    GL GM+GGQ+LD+  E       +D      +Q MKTGAL
Sbjct: 121 AWQPDAGIRADLVLGLARAAGLGGMVGGQLLDLGAEGRFGEAALDVDATLQLQAMKTGAL 180

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +  + E+GAI+  A   ++  L  +G  LG  FQ+ADD+LD E
Sbjct: 181 LAVSVEAGAIVGGADAEQRAALLAYGRALGQAFQVADDILDRE 223


>gi|295688780|ref|YP_003592473.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756]
 gi|295430683|gb|ADG09855.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756]
          Length = 299

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 95/197 (48%), Positives = 131/197 (66%), Gaps = 1/197 (0%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA LG GK++R F   E   +F++     LR   A+ECIH YSL+HDDLP+MD
Sbjct: 37  RLTEAMRYAALGPGKRLRPFFALETGKMFDLAERPVLRAACALECIHAYSLVHDDLPAMD 96

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVH QYDE TAI+AG+ L T AFEI++ P T    +IRS+L+  L    G 
Sbjct: 97  DDDVRRGRPTVHKQYDEATAILAGDALQTAAFEIMAHPDTHDDAHIRSELVRKLAIASGA 156

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +GM+GGQM+DI     D   V  +Q++KTGAL+ FA E   I+A A ++E+  L  F ++
Sbjct: 157 RGMVGGQMIDILGVRDDLGAVARMQRLKTGALIAFAFEIPLIIARAKESERHALMAFAQD 216

Query: 217 LGIIFQLADDLLDCEED 233
           LG+ +Q+ DD+LD E D
Sbjct: 217 LGLAYQIVDDILDAEGD 233


>gi|296447264|ref|ZP_06889193.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b]
 gi|296255226|gb|EFH02324.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b]
          Length = 306

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/231 (45%), Positives = 143/231 (61%), Gaps = 5/231 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           +L E +      LD LL  +    +     RLL A+RY AL GGK++R FL  E A LF 
Sbjct: 9   RLDEAAAATQATLDALLAPSPLEGEIARPARLLEAMRYVALGGGKRLRPFLALESARLFG 68

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V   +A R  AAIE IHCYSL HDDLP+MD+  +RRG+PT H  +DE TAI+AG+GLLTY
Sbjct: 69  VCGESAARAAAAIEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAGDGLLTY 128

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK 182
           AF++++ P T     IR++L+L+L    GL GM+GGQ LD++ E     + + +   +Q 
Sbjct: 129 AFDVLADPATHADPLIRARLVLALARAAGLGGMVGGQALDLEAEKAAAPLTQEETLRLQA 188

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+    + GAI+  AS      L  +G+ LG  FQ+ADD+LD E D
Sbjct: 189 MKTGALLRVCVDFGAILGGASAEVAAALGRYGDALGAAFQIADDILDAEGD 239


>gi|83945403|ref|ZP_00957751.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633]
 gi|83851237|gb|EAP89094.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633]
          Length = 296

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 148/231 (64%), Gaps = 9/231 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
           + L E + R+   LD LL +           R++SA+RYA LG GK++R FL+ E   L 
Sbjct: 6   THLTETADRVTVALDALLARP-----DGPEARVISAMRYAALGPGKRLRPFLLIEAGFLV 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +    LR   A+EC+H YSL+HDDLP MD+  +RRG+PTVH +YDE TA++AG+ L +
Sbjct: 61  GADERALLRAACAVECVHAYSLVHDDLPCMDDDDLRRGRPTVHKEYDEATAVLAGDALQS 120

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI---QK 182
            AFE+++ P+T     +R++L+L L+   G +GM+GGQM+D+  E  + + + +I   Q+
Sbjct: 121 QAFELLADPETHSNPAVRAELVLRLSKASGPRGMVGGQMIDMAVEAGELSDIGIITRCQR 180

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+ F  E+G ++A+A + ++  L  F  +LG+ +Q+ DDLLD E D
Sbjct: 181 MKTGALISFCAEAGGVIANADRAQRIALEGFAHDLGLCYQIVDDLLDAEGD 231


>gi|13473247|ref|NP_104814.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Mesorhizobium loti MAFF303099]
 gi|14023995|dbj|BAB50600.1| geranyltranstransferase; farnesyl-diphosphate synthase
           [Mesorhizobium loti MAFF303099]
          Length = 305

 Score =  174 bits (442), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/200 (54%), Positives = 146/200 (73%), Gaps = 3/200 (1%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           DRL++A+R+ +L GGK++R FLV E A+LF+ +   ALRV AA+EC+HCYSLIHDDLP+M
Sbjct: 41  DRLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAALRVAAALECVHCYSLIHDDLPAM 100

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG+PTVH  +DE TAI+AG+ LLT AF+I++S  T L  + R+ L+L+L    G
Sbjct: 101 DDDDLRRGQPTVHKAFDEATAILAGDALLTLAFDIVASEATVLPADRRAALVLALARAAG 160

Query: 156 LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+GGQ LD++ E    DE  +  +Q MKTGAL+ FACE+GAI+A A   ++ERL  F
Sbjct: 161 AGGMVGGQKLDLEAEQTPPDEAGIITLQAMKTGALIRFACEAGAIIAGAPAEDRERLAEF 220

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  +G+ FQLADDLLD   D
Sbjct: 221 GSAIGLAFQLADDLLDLTAD 240


>gi|306841490|ref|ZP_07474190.1| geranyltranstransferase [Brucella sp. BO2]
 gi|306288454|gb|EFM59810.1| geranyltranstransferase [Brucella sp. BO2]
          Length = 229

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/163 (56%), Positives = 120/163 (73%), Gaps = 2/163 (1%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+II+
Sbjct: 2   LRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIA 61

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
           S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ 
Sbjct: 62  SDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIR 121

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           FACE+GAI+A AS+ ++ER+  FG  +G+ FQLADDLLD   D
Sbjct: 122 FACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTAD 164


>gi|328541834|ref|YP_004301943.1| Geranyltranstransferase protein [polymorphum gilvum SL003B-26A1]
 gi|326411586|gb|ADZ68649.1| Geranyltranstransferase protein [Polymorphum gilvum SL003B-26A1]
          Length = 303

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/230 (45%), Positives = 146/230 (63%), Gaps = 3/230 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
           L + L E + R++ +L D L       +T+   RL+ A+R+A LGG K++R  L+ E A 
Sbjct: 7   LEAHLAEVAGRMEAVLADALAPAPKDGETERPSRLVEAMRHAALGGGKRLRPVLMVETAR 66

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF        R  AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE TAI+AG+ L
Sbjct: 67  LFGRADDGVYRAAAALECIHCYSLVHDDLPAMDDDDLRRGRPTVHKAFDEATAILAGDAL 126

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT AF++I+         +R +L   L    G+ GM GGQMLD++ E     ET++  +Q
Sbjct: 127 LTLAFDLIAEAPVHPDPAVRLRLSQELARAAGVGGMAGGQMLDLEAEHRVRSETEIRTLQ 186

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            MKTGAL+ +AC +GAI+A A   +  R+  FGE +G+ FQLADDLLD E
Sbjct: 187 AMKTGALLRYACRAGAILADAGAEDVARMTRFGEVVGLAFQLADDLLDLE 236


>gi|154244163|ref|YP_001415121.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
 gi|15553715|gb|AAL01997.1|AF408846_1 farnesyl diphosphate synthase [Xanthobacter autotrophicus Py2]
 gi|154158248|gb|ABS65464.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
          Length = 308

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/214 (44%), Positives = 140/214 (65%), Gaps = 13/214 (6%)

Query: 37  DRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL++A+R+ AL GGK++R FLV E A+LF +    A+    AIECIHCYSL+HDDLP+M
Sbjct: 37  ERLMAAMRHGALGGGKRLRPFLVIESAALFGIPADQAVTAATAIECIHCYSLVHDDLPAM 96

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG+PTVH  +DE TAI+AG+GLLT AF++++         +R  L+ +L    G
Sbjct: 97  DDDDLRRGRPTVHRAFDEATAILAGDGLLTLAFDLLAGEDAHPDPAVRIALVRALARASG 156

Query: 156 LQGMLGGQMLDIQDE---------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           + GM+GGQMLD+  E          + E  +  +Q MKTGAL+  + E+GA++  A+ +E
Sbjct: 157 IGGMVGGQMLDLAAEGRFSGGTPLALAEDAIRDLQAMKTGALLAVSVEAGALLGGATADE 216

Query: 207 KERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237
           +  L  +G  LG  FQ+ADD+LD E   E++ KK
Sbjct: 217 RAALLAYGRALGAAFQIADDILDVEGTAEEVGKK 250


>gi|16126308|ref|NP_420872.1| geranyltranstransferase [Caulobacter crescentus CB15]
 gi|221235087|ref|YP_002517523.1| dimethylallyltransferase/geranyltranstransferase [Caulobacter
           crescentus NA1000]
 gi|13423548|gb|AAK24040.1| geranyltranstransferase [Caulobacter crescentus CB15]
 gi|220964259|gb|ACL95615.1| dimethylallyltransferase/Geranyltranstransferase [Caulobacter
           crescentus NA1000]
          Length = 294

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/219 (45%), Positives = 139/219 (63%), Gaps = 5/219 (2%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR 74
           I T+  D LL  A   ++    RL  A+RYA LG GK++R F   E   +F++     LR
Sbjct: 14  IVTVALDELLPRADGPES----RLTEAMRYAALGPGKRLRPFFALETGKMFDLPERPVLR 69

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+ECIH YSL+HDDLP+MD+  +RRG+PTVH QYDE TAI+AG+ L T AFEI++ P
Sbjct: 70  AACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGDALQTAAFEIMAHP 129

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            T    ++RS+L+  L    G +GM GGQM+D+     D   V  +Q++KTGAL+ FA E
Sbjct: 130 DTHDDGHVRSELVRKLAIASGARGMCGGQMIDLLGVRDDLGAVARMQRLKTGALIAFAFE 189

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              I+A A ++E+  L  F ++LG+ +Q+ DD+LD E D
Sbjct: 190 IPLIIARAKESERSALMAFAQDLGLAYQIVDDILDAEGD 228


>gi|167647277|ref|YP_001684940.1| polyprenyl synthetase [Caulobacter sp. K31]
 gi|167349707|gb|ABZ72442.1| Polyprenyl synthetase [Caulobacter sp. K31]
          Length = 294

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/197 (47%), Positives = 130/197 (65%), Gaps = 1/197 (0%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA LG GK++R F   E   +F++     LR   A+ECIH YSL+HDDLP+MD
Sbjct: 32  RLTEAMRYAALGPGKRLRPFFALETGKMFDLPERPVLRAACALECIHAYSLVHDDLPAMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVHIQYDE TAI+AG+ L T AFEI++ P T    ++RS+L+  L    G 
Sbjct: 92  DDDVRRGRPTVHIQYDEATAILAGDALQTAAFEIMAHPDTHDDGHVRSELVRKLAIASGA 151

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +GM GGQM+D+     D   V  +Q++KTGAL+ FA E   I+A A  +E+  L  F ++
Sbjct: 152 KGMAGGQMIDLLGVRDDLGAVARMQRLKTGALIAFAFEIPLIIARAKDSERSALMGFAQD 211

Query: 217 LGIIFQLADDLLDCEED 233
           LG+ +Q+ DD+LD E D
Sbjct: 212 LGLAYQIVDDILDEEGD 228


>gi|148260202|ref|YP_001234329.1| polyprenyl synthetase [Acidiphilium cryptum JF-5]
 gi|326402853|ref|YP_004282934.1| geranyltranstransferase [Acidiphilium multivorum AIU301]
 gi|146401883|gb|ABQ30410.1| farnesyl-diphosphate synthase [Acidiphilium cryptum JF-5]
 gi|325049714|dbj|BAJ80052.1| geranyltranstransferase [Acidiphilium multivorum AIU301]
          Length = 301

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/219 (44%), Positives = 143/219 (65%), Gaps = 8/219 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74
           I+T LD LL      +       L+ A+RYA+LGG K++R FLV E A LF+VN   A+R
Sbjct: 21  IETELDVLL-----PLPEGEERPLVEAMRYAVLGGGKRMRGFLVIETARLFSVNITCAVR 75

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V AA+E +H YSL+HDDLP+MD+  +RRGKP+ H  +DE TAI+AG+ L T AFE+++ P
Sbjct: 76  VAAAVEMLHAYSLVHDDLPAMDDDDLRRGKPSCHKAFDEATAILAGDALQTRAFEVLAEP 135

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
            T     +R +L+L+L    G +GM+GGQM+DI  E   ++   +  +Q +KTG L+ F+
Sbjct: 136 DTHSDPEVRCELVLALAAASGARGMVGGQMIDIVSEGRQLEPPVITRLQALKTGRLIQFS 195

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            E+GAI+  A   ++  +  +G +LG  FQ+ADD+LD E
Sbjct: 196 AEAGAILGRAPGPQRHHIAGYGRDLGAAFQIADDILDEE 234


>gi|190571159|ref|YP_001975517.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018563|ref|ZP_03334371.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357431|emb|CAQ54865.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995514|gb|EEB56154.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 260

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 133/212 (62%), Gaps = 12/212 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   +S+FN+    A+   AAIE 
Sbjct: 10  LVVEVNKLLPENSENKLISAMRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP MDN   RRG+P+ H ++ E TA++AG+ LLT AFE++S         
Sbjct: 70  IHAYSLIHDDLPCMDNSDTRRGQPSCHKKFGEATAVLAGDALLTLAFEVLSL-------- 121

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +  +++  L+  IG++GM+GGQ+LDI  +F    ++  I  MKT  L   +CE GAI+  
Sbjct: 122 LNCEIIKVLSQAIGMKGMVGGQILDIGADF---DKIKEIHLMKTAKLFAASCEIGAIIGG 178

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A+  E+E L  +G NLG+IFQ  DD+ D E+D
Sbjct: 179 ATDKEREALYNYGINLGLIFQAKDDIEDYEQD 210


>gi|294084635|ref|YP_003551393.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664208|gb|ADE39309.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 302

 Score =  172 bits (435), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/216 (44%), Positives = 130/216 (60%), Gaps = 14/216 (6%)

Query: 30  HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIEC 81
           + Q+    RL+ A+RYA+L GGK++R+ LV   A L              ALRV AA+EC
Sbjct: 24  NAQSMQAPRLVDAMRYAVLNGGKRMRAGLVLGAARLAATESDASTYIDSRALRVAAALEC 83

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP+MD+   RRGK + HI YDE TAI+AG+ L T AFEI++   T     
Sbjct: 84  LHAYSLIHDDLPAMDDADTRRGKSSCHIAYDEATAILAGDALQTLAFEILADDATHPDPA 143

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGA 197
           +R  L+ +L    GL GM GGQMLD+Q E     + ET+   +Q MKTGAL+  A   GA
Sbjct: 144 VRVALVTTLARASGLAGMAGGQMLDLQAETRTLTLAETE--QMQMMKTGALIVCAASCGA 201

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++  AS      +  + + LG+ FQ+ADDLLD + D
Sbjct: 202 LVGEASSTLVNAIVAYADKLGLAFQIADDLLDYDGD 237


>gi|114797210|ref|YP_760540.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444]
 gi|114737384|gb|ABI75509.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444]
          Length = 295

 Score =  171 bits (434), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/229 (42%), Positives = 146/229 (63%), Gaps = 8/229 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +L E + ++   LD L+   AS  +      L+ A+R+A L  GK++R F V E  ++F 
Sbjct: 7   RLTEVADKVTVALDQLI-PPASGPEAN----LMRAMRHAALANGKRMRPFFVLETGAMFG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +  + LR  AA+ECIHCYSL+HDDLP MD+   RRG+PTVH  +DE TA++AG+ LLT 
Sbjct: 62  ASEKSLLRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTL 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMK 184
           AF+I++S +T     +R  L+  L    G +GM+GGQM+D+ +E    D   +  +Q++K
Sbjct: 122 AFKILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRMQRLK 181

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+ +A E+G I+ HA + E+  L  F  +LG+ +Q+ADD+LD E D
Sbjct: 182 TGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGD 230


>gi|254561671|ref|YP_003068766.1| geranyltranstransferase [Methylobacterium extorquens DM4]
 gi|254268949|emb|CAX24910.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Methylobacterium extorquens DM4]
          Length = 320

 Score =  171 bits (434), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/239 (43%), Positives = 148/239 (61%), Gaps = 11/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
            G    +L + +  ++T L DLL  T    +     RL+ A+R+A+LGG K++R FL  E
Sbjct: 17  TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A +       AL  GA +E +HCYSL+HDDLP+MD+  +RRGKPTVH  YDE TAI+ G
Sbjct: 77  TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--------I 172
           + L T AFE+ + P+ Q    IR++L+L L    GL GM+GGQ+LD+  E         I
Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           D+T    +Q MKTGA++ F+ E+GA++  A+ +E+  L  +G+ LG  FQ+ADD+LD E
Sbjct: 197 DDT--LRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDRE 253


>gi|307943552|ref|ZP_07658896.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp.
           TrichSKD4]
 gi|307773182|gb|EFO32399.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp.
           TrichSKD4]
          Length = 310

 Score =  171 bits (433), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/230 (46%), Positives = 153/230 (66%), Gaps = 3/230 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L ++L   + +++  LD++L  T    +    +RLL+A+R+ AL GGK+IR  L+ E   
Sbjct: 14  LKTRLTTQAAKVEARLDEMLAATPLENEVARPERLLAAMRHGALNGGKRIRPVLLLETVR 73

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF+ +   AL +  A+E IHCYSL+HDDLP+MD+  +RRG+PTVHI YDE TAI+AG+ L
Sbjct: 74  LFDQDDTQALDIACALEFIHCYSLVHDDLPAMDDDDLRRGQPTVHIAYDEATAILAGDAL 133

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQ 181
           LT AF+++++P       I+ +L+  L    GL GM GGQMLD++ E  D  E ++  +Q
Sbjct: 134 LTLAFDVVANPGLHQDARIQLRLVRELAQAAGLGGMAGGQMLDLESEHRDRSEAEIRKLQ 193

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            MKTGAL+ F C  GAI ++A + + ER+  FGE +G+ FQLADDLLD E
Sbjct: 194 SMKTGALLRFGCRGGAIFSNAREEDVERVTHFGEIIGLAFQLADDLLDVE 243


>gi|163851951|ref|YP_001639994.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
 gi|218530703|ref|YP_002421519.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
 gi|240139077|ref|YP_002963552.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Methylobacterium extorquens AM1]
 gi|163663556|gb|ABY30923.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
 gi|218523006|gb|ACK83591.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
 gi|240009049|gb|ACS40275.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Methylobacterium extorquens AM1]
          Length = 320

 Score =  171 bits (433), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/239 (43%), Positives = 148/239 (61%), Gaps = 11/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
            G    +L + +  ++T L DLL  T    +     RL+ A+R+A+LGG K++R FL  E
Sbjct: 17  TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A +       AL  GA +E +HCYSL+HDDLP+MD+  +RRGKPTVH  YDE TAI+ G
Sbjct: 77  TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--------I 172
           + L T AFE+ + P+ Q    IR++L+L L    GL GM+GGQ+LD+  E         I
Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           D+T    +Q MKTGA++ F+ E+GA++  A+ +E+  L  +G+ LG  FQ+ADD+LD E
Sbjct: 197 DDT--LRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDRE 253


>gi|260461502|ref|ZP_05809749.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259032572|gb|EEW33836.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 305

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/199 (53%), Positives = 143/199 (71%), Gaps = 3/199 (1%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL++A+R+ +L GGK++R FLV E A+LF+ +   ALRV AA+EC+HCYSLIHDDLP+MD
Sbjct: 42  RLMAAMRHGVLNGGKRLRPFLVMESAALFSADGEAALRVAAALECVHCYSLIHDDLPAMD 101

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVH  +DE TAI+AG+ LLT AF+II+   T L    R+ L+L+L    G 
Sbjct: 102 DDDMRRGQPTVHRAFDEATAILAGDALLTLAFDIIAGEATVLPAERRAALVLALARAAGA 161

Query: 157 QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ LD++ E    DE  +  +Q MKTGAL+ FACE+GAI+A A   ++ERL  FG
Sbjct: 162 GGMVGGQTLDLEAERTPPDEAGIIRLQAMKTGALIRFACEAGAIIAGAPAEDRERLAEFG 221

Query: 215 ENLGIIFQLADDLLDCEED 233
             +G+ FQLADDLLD   D
Sbjct: 222 SAVGLAFQLADDLLDLTAD 240


>gi|329115335|ref|ZP_08244089.1| Geranyltranstransferase [Acetobacter pomorum DM001]
 gi|326695314|gb|EGE47001.1| Geranyltranstransferase [Acetobacter pomorum DM001]
          Length = 312

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 145/229 (63%), Gaps = 8/229 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
           L   +   ++ I+  +D LL  T     T  + RL+ A+RYA LGG K++R +L    AS
Sbjct: 21  LKQDMGARARVIEHTIDTLLPLT-----TGGDARLIEAMRYATLGGGKRLRGYLAIVTAS 75

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF V    + RV A++E +H YSL+HDDLP+MD+  +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 76  LFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRKFDEATAILAGDAL 135

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
            T AFEI+++ +T    N+R  L+ +     G  GM+GGQM+D++ E   +   +V  + 
Sbjct: 136 QTKAFEILAASQTHADANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLAEVRHLH 195

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +KTG L+ ++ ESGAI+  AS N + RLR +G N+G  FQ+ADD+LD 
Sbjct: 196 ALKTGCLIRYSAESGAILGQASPNLRRRLRSYGANIGAAFQIADDVLDA 244


>gi|197104377|ref|YP_002129754.1| geranyltranstransferase [Phenylobacterium zucineum HLK1]
 gi|196477797|gb|ACG77325.1| geranyltranstransferase [Phenylobacterium zucineum HLK1]
          Length = 292

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/230 (42%), Positives = 138/230 (60%), Gaps = 6/230 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           L  ++ E +  +   LD+LL +           RL  A+RYA LG GK++R+F   E   
Sbjct: 3   LSRRVAEAADLVTVALDELLPRGEGP-----ESRLTEAMRYAALGPGKRLRTFFALETGR 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F+++    LR   A+ECIH YSL+HDDLP MD+  +RRG+PTVH  YDE TA++AG+ L
Sbjct: 58  MFDLDDRPVLRSACALECIHAYSLVHDDLPCMDDDDVRRGRPTVHKAYDEATAVLAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T AFEI++ P T     IR++L+  L H  G +GM GGQM+DI     D   V  +Q++
Sbjct: 118 QTAAFEILAHPDTHPDGGIRAELVARLAHASGARGMAGGQMIDILGVREDLGGVARMQRL 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  A E   ++A A   E+  L  F  +LG+ +Q+ DDLLD E D
Sbjct: 178 KTGALIACAFELPLVLARAMDGERHALMNFAHDLGLAYQIVDDLLDAEGD 227


>gi|307293392|ref|ZP_07573238.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
 gi|306881458|gb|EFN12674.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
          Length = 302

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/230 (42%), Positives = 144/230 (62%), Gaps = 8/230 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
           S+    ++ +D + D LL      +      RL  A+R+A +GG K++R  LV   + LF
Sbjct: 13  SRAAALAEDVDRLFDTLLA-----VPDDPRRRLYEAMRHAAMGGGKRLRPLLVQAASDLF 67

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N++  +ALRVG A+ECIH YSL+HDDLP+MD+  +RRGKPTVH  +DE TAI+AG+ L  
Sbjct: 68  NISRDSALRVGVAVECIHVYSLVHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDCLHD 127

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
            AFEI++  +T     +R +L+ +L    G  GM GGQM+D++ E    D   V  +Q++
Sbjct: 128 LAFEILADEETHPDPFVRVELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQQL 187

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ F  ++ AIMA    + + RL  +  ++G+ FQ+ADDLLD E D
Sbjct: 188 KTGALIAFCVDAAAIMARIPPDARPRLHGYARDIGLAFQIADDLLDVEGD 237


>gi|258542579|ref|YP_003188012.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633657|dbj|BAH99632.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636716|dbj|BAI02685.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639769|dbj|BAI05731.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642825|dbj|BAI08780.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645880|dbj|BAI11828.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648933|dbj|BAI14874.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651920|dbj|BAI17854.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654977|dbj|BAI20904.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 312

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 147/233 (63%), Gaps = 9/233 (3%)

Query: 2   NGGL-PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           NG L    +   ++ I+  +D LL  T     T  + RL+ A+RYA LGG K++R +L  
Sbjct: 17  NGALLKQDMGARARVIEHTIDTLLPLT-----TGGDARLIEAMRYATLGGGKRLRGYLAI 71

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             ASLF V    + RV A++E +H YSL+HDDLP+MD+  +RRG+P+ H Q+DE TAI+A
Sbjct: 72  VTASLFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRQFDEATAILA 131

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ L T AFEI+++ +T    N+R  L+ +     G  GM+GGQM+D++ E   +   +V
Sbjct: 132 GDALQTKAFEILAASQTHTDANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLEEV 191

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +  +KTG L+ ++ ESGAI+  AS + + RLR +G N+G  FQ+ADD+LD 
Sbjct: 192 RHLHALKTGCLIRYSAESGAILGQASPDLRRRLRSYGANIGAAFQIADDVLDA 244


>gi|158426076|ref|YP_001527368.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571]
 gi|158332965|dbj|BAF90450.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571]
          Length = 311

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/205 (44%), Positives = 128/205 (62%), Gaps = 10/205 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+R+  L GGK++R  LV E A+LF V    A+   AA+EC+HCYSLIHDDLP+MDN
Sbjct: 42  LMAAMRHGSLDGGKRLRPLLVVESAALFGVPLARAITAAAALECVHCYSLIHDDLPAMDN 101

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+PTVH+ + E TAI+AG+GLLT AF++++         +R  L+  L    G+ 
Sbjct: 102 DLLRRGRPTVHVAFGEETAILAGDGLLTLAFDLLAGEDAHPDAQVRIALVRLLARASGIG 161

Query: 158 GMLGGQMLDIQDE---------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           GM+GGQMLD+  E          + E  +  +Q MKTGAL+    E GA++  A    + 
Sbjct: 162 GMVGGQMLDLAAEGRFSGGTPQALSEADIRTLQAMKTGALLRAGVEMGALLGGADAEARA 221

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  +G  LG+ FQ+ADD+LD E D
Sbjct: 222 ALAAYGTALGVAFQIADDILDIEGD 246


>gi|330994690|ref|ZP_08318613.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1]
 gi|329758331|gb|EGG74852.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1]
          Length = 311

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 147/229 (64%), Gaps = 8/229 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
           L + +   +  I++++D LL +           RL+ A+RYA LGG K++R +LV E AS
Sbjct: 20  LRASMSARATAIESMIDRLLPRVEGG-----EARLIDAMRYATLGGGKRLRGYLVAEVAS 74

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LFNV    A RV A++E +H YSL+HDDLP+MD+  +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 75  LFNVAAEGADRVAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDAL 134

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
            T AF+I+++P T     +R  L+ +L    G  GM+GGQM+D++ E   +   +V  + 
Sbjct: 135 QTMAFDILANPLTHAGAEVRINLVRALADASGAAGMVGGQMIDMEGEGRALSLEEVARLH 194

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +KTG L+ ++ E+GAI+  A ++ + R+  +G +LG  FQ+ADD+LD 
Sbjct: 195 ALKTGCLIRYSAEAGAILGQAGEDARLRISAYGRDLGAAFQIADDVLDA 243


>gi|332187832|ref|ZP_08389566.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
 gi|332012182|gb|EGI54253.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
          Length = 296

 Score =  168 bits (426), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/198 (48%), Positives = 129/198 (65%), Gaps = 3/198 (1%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +A+R+A +GG K++R  LV   A LF+V+   A  V  A+E IH YSLIHDDLP+MD+
Sbjct: 34  LYAAMRHAAIGGGKRLRPLLVFATARLFDVDRDCAGWVATALEAIHVYSLIHDDLPAMDD 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH  +DE TAI+AG+ L   AFEI++ P T     +RS+L+L L    G  
Sbjct: 94  DDMRRGKPTVHKAFDEATAILAGDCLHALAFEILADPSTHPDPFVRSELILDLARASGPS 153

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM GGQM+D++ E    D   V  +Q+MKTGAL+C A E+GAI+       +  LR +  
Sbjct: 154 GMAGGQMMDLEAERQIFDLPTVTRLQQMKTGALICAAVEAGAILGRVPPEGRTHLRGYAH 213

Query: 216 NLGIIFQLADDLLDCEED 233
           +LG+ FQ+ADDLLD E D
Sbjct: 214 DLGLAFQIADDLLDAEGD 231


>gi|58696945|ref|ZP_00372440.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58699606|ref|ZP_00374302.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630859|ref|YP_002727650.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
 gi|58533876|gb|EAL58179.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58536823|gb|EAL60043.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225592840|gb|ACN95859.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
          Length = 263

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 9/212 (4%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10  LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP MDN   RR + + H ++DE TA++AG+ LLT AFE++SS   +    
Sbjct: 70  VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK---- 125

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            R +++  L+  IG++GM+GGQ LDI  +F    ++  I  MKT  L   +CE GAI+  
Sbjct: 126 -RCEIIKVLSQAIGIRGMVGGQALDIDTDF---NKIKEIHLMKTAKLFAASCEIGAIIGG 181

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A+  ++  L  FG NLG+IFQ  DD+ D E+D
Sbjct: 182 ATDEQRRALYNFGINLGLIFQAKDDIEDYEQD 213


>gi|254455595|ref|ZP_05069024.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082597|gb|EDZ60023.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 290

 Score =  168 bits (425), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 136/218 (62%), Gaps = 3/218 (1%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           +++ I  D  +     +  Q N +L+ A++Y L  GGKKIRS ++ +  S+ ++++ T +
Sbjct: 4   KLNKIAKDTNIFLKDFINKQKNSKLILAMKYGLFPGGKKIRSKILIDIGSMMSIDYKTLI 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +GAA+ECIH Y+LIHDDLP MD+  IRRGKP+ HI++ E TAI+AGN L T A EI++S
Sbjct: 64  AIGAAVECIHAYTLIHDDLPCMDDDKIRRGKPSTHIKFGESTAILAGNSLQTMACEILTS 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCF 191
            K ++ D I+ +L+  L+   G  G+ GGQ LD+  E   + + ++  ++  KTG L  F
Sbjct: 124 SKLKIGDKIKIELIKKLSECSGHLGVAGGQYLDLSYEKRKVSKKKIIEMEIKKTGKLFSF 183

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            C + AI+      E +     G  +G++FQ+ADDL+D
Sbjct: 184 CCVAPAIIKKKDNQEIKFFEDLGSKIGLLFQIADDLID 221


>gi|114569399|ref|YP_756079.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10]
 gi|114339861|gb|ABI65141.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10]
          Length = 295

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 8/229 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +L E++ R+ T+  D LL  A   +   N    SA+RYA LG GK++R FL  E   L +
Sbjct: 7   RLNEHADRV-TVALDALLPRAEGPEAHLN----SAMRYAALGPGKRLRPFLTIEAGHLVH 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    LR   A+ECIH YSLIHDDLP MD+  +RRG+PTVH  YDE TA++AG+GL + 
Sbjct: 62  ADERGVLRAACALECIHAYSLIHDDLPCMDDDDMRRGRPTVHKAYDEATAVLAGDGLQSI 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           A+EI++ P T  + ++R++L+  L+   G  GM+GGQM+DI+ E    D + V  + +MK
Sbjct: 122 AYEILAHPDTHQRGSVRARLVERLSRASGPYGMVGGQMIDIRAETEQFDISVVTRMHRMK 181

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+ +A E+  I+       +  L  F  +LG+ +Q+ DDLLD   D
Sbjct: 182 TGALISYAVEAATILKDVDDPVRRALEGFAHDLGLAYQITDDLLDATGD 230


>gi|262277469|ref|ZP_06055262.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha
           proteobacterium HIMB114]
 gi|262224572|gb|EEY75031.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha
           proteobacterium HIMB114]
          Length = 292

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 85/205 (41%), Positives = 129/205 (62%), Gaps = 5/205 (2%)

Query: 29  SHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           S+ + Q  D RL  A+ Y L  GGK IRS+LV     +F+++    + + AA+EC+H YS
Sbjct: 21  SYFKNQSADNRLYEAMEYGLFSGGKMIRSYLVQSTCKIFDIDEKKYIPIAAAVECVHSYS 80

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDDLPSMDN   RRGK + H  Y E TAI+AG+ LLT AFE+IS PK ++ ++I++++
Sbjct: 81  LIHDDLPSMDNDDFRRGKESTHKAYGEYTAILAGSSLLTLAFEMISDPKFEIDEDIKTKI 140

Query: 147 MLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           + +L+ + G  G+ GGQ  D  ++   +D+  +  +Q  KTGALM F  E   +++H  +
Sbjct: 141 IHALSSSSGHLGIAGGQFFDLSLKKSEVDKETIIDMQNKKTGALMGFCTEVAPLLSHKKE 200

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
             K   +  G  +G++FQ+ DD LD
Sbjct: 201 LAK-TFKDLGIKIGLLFQIVDDFLD 224


>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 295

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/236 (43%), Positives = 140/236 (59%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           +NG L     E  K+ID  L  ++      +Q      L  A+ Y+L  GGK+IR  L+ 
Sbjct: 2   INGTLKHFFDEEKKQIDNRLPHIIENLNIPVQ------LRDAMIYSLKAGGKRIRPMLLL 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                +N        V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+A
Sbjct: 56  ATLRGYNKPLSHGYDVACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
           G+GLLTY+F++ISS    L DN++  L+  ++   G +GM+GGQ+LD+Q E I  +  Q+
Sbjct: 116 GDGLLTYSFQLISS-SMLLPDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             I   KTG L+  + ESGAI+A  S+NE+  L  F ++LGI FQ+ DD+LD E D
Sbjct: 175 QKIHHHKTGDLLAVSVESGAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGD 230


>gi|94497294|ref|ZP_01303865.1| Polyprenyl synthetase [Sphingomonas sp. SKA58]
 gi|94423157|gb|EAT08187.1| Polyprenyl synthetase [Sphingomonas sp. SKA58]
          Length = 302

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 132/200 (66%), Gaps = 3/200 (1%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+R+A +GG K++R  LV     LF+++  +ALRVG AIECIH YSLIHDDLP+MD
Sbjct: 39  RLYDAMRHAAIGGGKRLRPLLVQAACDLFHISRESALRVGLAIECIHVYSLIHDDLPAMD 98

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH  +DE TAI+AG+ L   AFE+++  +T     +R +L+ +L    G 
Sbjct: 99  DDDMRRGKPTVHKAFDEATAILAGDCLHDLAFEVLADAETHPDPFVRIELVKALATCSGP 158

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM GGQM+D++ E    D   V  +Q +KTGAL+CF  E+ AIMA   Q  +  L  + 
Sbjct: 159 AGMAGGQMMDLEAERTRFDLATVTRLQNLKTGALICFCVEAAAIMARLPQEARTGLHGYA 218

Query: 215 ENLGIIFQLADDLLDCEEDL 234
            ++G+ FQ+ADDLLD E D+
Sbjct: 219 RDIGLAFQIADDLLDVEGDV 238


>gi|296116237|ref|ZP_06834855.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977343|gb|EFG84103.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 295

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 131/196 (66%), Gaps = 3/196 (1%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ A+RYA LGG K++R +LV E AS+F V    A R  A++E +H YSL+HDDLP+MD
Sbjct: 32  RLIDAMRYATLGGGKRLRGYLVAEVASMFKVEEAGAYRAAASVEMLHAYSLVHDDLPAMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+P+ H ++DE TAI+AG+ L T AF I++ P T     +R  L+ +L    G 
Sbjct: 92  DDDLRRGQPSTHRKFDEATAILAGDALQTMAFGILADPATHRDAGVRIDLVTTLAAASGA 151

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQM+D++ E   +   +V  +  +KTG L+ ++ E+GAI+  A+ + +ER+  +G
Sbjct: 152 AGMVGGQMIDMEGEGRSLSLEEVARLHALKTGCLIRYSAEAGAILGQAAPDLRERIAAYG 211

Query: 215 ENLGIIFQLADDLLDC 230
            +LG  FQ+ADD+LD 
Sbjct: 212 RDLGAAFQVADDVLDA 227


>gi|225677225|ref|ZP_03788218.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590749|gb|EEH11983.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 263

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 9/212 (4%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10  LIVEVNRLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP MDN   RR + + H ++DE TA++AG+ LLT AFE++SS   +    
Sbjct: 70  VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK---- 125

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            R +++  L+  IG++GM+GGQ LDI  +F    ++  I  MKT  L   +CE GAI+ +
Sbjct: 126 -RCEIIKVLSQAIGIRGMVGGQALDIGADF---NKIKEIHLMKTAKLFAASCEIGAIIGN 181

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A   +++ L  +G NLG+IFQ  DD+ D E+D
Sbjct: 182 AIDKQRKALYNYGINLGLIFQAKDDIEDYEQD 213


>gi|304322149|ref|YP_003855792.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
           [Parvularcula bermudensis HTCC2503]
 gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
           [Parvularcula bermudensis HTCC2503]
          Length = 296

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/193 (45%), Positives = 122/193 (63%), Gaps = 2/193 (1%)

Query: 38  RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+ + AL GGK++R FLV E AS+F  +   AL    AIE +HCYSLIHDDLP+MD
Sbjct: 36  RLRAAMAHGALGGGKRLRPFLVLEAASIFGADDEAALPAATAIEMVHCYSLIHDDLPAMD 95

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +   RRG+P+VH  YDE  AI+AG+GLLT AF +++   T        +L+  L    G 
Sbjct: 96  DADTRRGRPSVHKAYDEAIAILAGDGLLTDAFALLTEEGTYTAPTA-CRLVRELALAAGS 154

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            GM+GGQM+D+  +  DE  +  IQ+ KTGAL+  A   GAI+  A+ +++  LR +   
Sbjct: 155 GGMVGGQMMDLYPDGGDEAAIVGIQRRKTGALIEAAAVMGAIVGAAAPSDEAALRQYAAA 214

Query: 217 LGIIFQLADDLLD 229
           +G  FQ+ DD+LD
Sbjct: 215 VGEAFQVVDDILD 227


>gi|170747046|ref|YP_001753306.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170653568|gb|ACB22623.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 323

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/231 (42%), Positives = 142/231 (61%), Gaps = 7/231 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           +L E +  ++T L + L       +     RL+ A+R+A+LGG K++R FL  E A +  
Sbjct: 26  RLTEVAGTVETFLVERLGPAVGPGEIARPPRLMEAMRHAVLGGGKRLRPFLAIETARMLG 85

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   AL  GA +E +HCYSL+HDDLP+MD+  +RRGKPTVH  YDE TAI+ G+ L T 
Sbjct: 86  GSEAAALAAGAGVELVHCYSLVHDDLPAMDDDDMRRGKPTVHKAYDEATAILVGDALQTL 145

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQVFMI 180
           AFEI++ P  Q    +R+ L+L L    GL GM+GGQ+LD+  E       +D      +
Sbjct: 146 AFEIVADPAWQPDARVRADLVLGLARASGLGGMVGGQLLDLTAEGRFGAANMDVDDTLRM 205

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           Q MKTGA++ F+ E+GAI+  A ++++  L  +G  LG  FQ+ADD+LD E
Sbjct: 206 QAMKTGAILAFSVEAGAIVGGADKDQRAALLRYGLALGQAFQIADDILDRE 256


>gi|315498417|ref|YP_004087221.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48]
 gi|315416429|gb|ADU13070.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48]
          Length = 303

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/236 (43%), Positives = 138/236 (58%), Gaps = 9/236 (3%)

Query: 2   NGGLPS---KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFL 57
           N  LP    ++QE +  +   LD+LL +           RL  A+RYA LG GK++R F 
Sbjct: 7   NSDLPPLHERMQETADLVTMALDELLPRAEGF-----ESRLTEAMRYAALGPGKRLRPFF 61

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
             E   LF+ +    LR   A+ECIH YSL+HDDLP MD+  IRRG+ TVH  YDE TA+
Sbjct: 62  ALETGRLFDADSQAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGQLTVHRAYDEATAV 121

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           +AG+ L T AFEI++S  T     +R +L+  L    G QGM GGQM+D+     D   V
Sbjct: 122 LAGDALQTVAFEILASEDTHEDPRVRVELISRLALASGAQGMAGGQMIDLIGVSDDLGGV 181

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +Q+MKTGAL+  A E   I+A A + E   L  F ++LG+ +Q+ADDLLD E D
Sbjct: 182 ARMQRMKTGALIVHAFEIPIIIADAPEKEANSLIHFAQDLGLAYQIADDLLDVEGD 237


>gi|149202564|ref|ZP_01879536.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035]
 gi|149143846|gb|EDM31880.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035]
          Length = 287

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 119/195 (61%), Gaps = 8/195 (4%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +RYA  GGK+IR FLV E A L +V    A+    AIE +H YSL+HDDLP+MDN  +RR
Sbjct: 32  MRYATQGGKRIRGFLVMESARLHDVPETAAIWPATAIEALHAYSLVHDDLPAMDNDDLRR 91

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+PTVHI++DE TAI+ G+ L + AFE+++ P     + +R+ L LSL    G QGM+ G
Sbjct: 92  GQPTVHIKWDEATAILVGDALQSLAFELVAHPDCGPAE-VRAGLTLSLARAAGGQGMVLG 150

Query: 163 QMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           Q LDI  E         ++  +Q  KTGAL+ ++  +GA MAHA       L  +   LG
Sbjct: 151 QALDIAAETATSPLSLDEITTLQAGKTGALILWSATAGACMAHADMTP---LSTYARALG 207

Query: 219 IIFQLADDLLDCEED 233
           + FQ+ DD++D   D
Sbjct: 208 LAFQIQDDVIDVTGD 222


>gi|154251236|ref|YP_001412060.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154155186|gb|ABS62403.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 302

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/230 (42%), Positives = 145/230 (63%), Gaps = 8/230 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
           + L   + +++ +LD LL +           R+  A+RYA LGG K+ R FLV + A+LF
Sbjct: 13  AGLATVAAKVEEMLDRLLPRVEGP-----EARIAEAMRYAALGGGKRFRPFLVAQSAALF 67

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V    ALR  AA EC+H YSL+HDDLP MD+  +R G P VH Q+DE TA++AG+ LLT
Sbjct: 68  GVASEAALRAAAAAECVHIYSLVHDDLPCMDDDDLRHGLPAVHRQFDEATAVLAGDALLT 127

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
            AFEI++ P+T  +  +R +L+  L    G  GM+GGQ++D+  E   +D   +  +Q++
Sbjct: 128 LAFEILADPETHERARVRIELVRRLAIASGAHGMVGGQIIDLTSEGRELDMGGITRLQQL 187

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ F+CE+GAI+  AS +    L  +  ++G+ +Q+ADD+LD E D
Sbjct: 188 KTGALISFSCEAGAILGRASPDALHALHAYAHDMGLAYQIADDILDAEGD 237


>gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
           HTCC2255]
 gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
           HTCC2255]
          Length = 291

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/210 (43%), Positives = 137/210 (65%), Gaps = 13/210 (6%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +Q Q ND + + IR+A+L GGK++R+FLV    ++F V   TA++   AIEC+H YSL+H
Sbjct: 23  LQKQGNDLMSAPIRHAVLNGGKRLRAFLVIHSCNIFEVQKDTAIQAAIAIECLHAYSLVH 82

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIR-SQLM 147
           DDLP MD+  +RRGKPTVH+++DE TA + G+ L   AFE+I+S P T   D IR  +L+
Sbjct: 83  DDLPCMDDDELRRGKPTVHVKWDEATATLTGDALQALAFELIASLPNT---DAIRIVELL 139

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
             L    G+QGM+ GQ  DIQ E     ++   +  +Q+ KTGAL+ ++  SGAI+   S
Sbjct: 140 KKLAKASGMQGMVLGQAQDIQAEKSEVNLNINDITSLQQNKTGALIEWSAISGAIL---S 196

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++  +L  + +++G+ FQ+ DD+LD E D
Sbjct: 197 NHDDRKLLDYAKSIGLAFQIQDDILDIEGD 226


>gi|304394308|ref|ZP_07376231.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130]
 gi|303293748|gb|EFL88125.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130]
          Length = 300

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/210 (44%), Positives = 141/210 (67%), Gaps = 4/210 (1%)

Query: 27  TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           +A+  + Q  +RL++A+R+ +L GGK++R FLV E A+LF V+   AL    A+EC+H +
Sbjct: 27  SAAEGERQRPERLVAAMRHGVLNGGKRVRPFLVVESAALFGVSLDDALPTACALECLHSF 86

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ L T AF+I++S ++     +R +
Sbjct: 87  SLVHDDLPAMDDDDLRRGQPTVHKAFDEALAILAGDALSTLAFDILAS-RSSADAAVRCE 145

Query: 146 LMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L   L    G  GM+GGQ+LDI  +D    + ++  +Q MKTGAL+ FACE+GA++  A 
Sbjct: 146 LTTMLARASGWGGMIGGQVLDIEAEDGAPTDAEIRTLQAMKTGALIRFACEAGAVLGGAD 205

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +  LR +GE +G+ FQLADD+LD   D
Sbjct: 206 DAARAALRSYGETVGLAFQLADDILDVTAD 235


>gi|91762255|ref|ZP_01264220.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718057|gb|EAS84707.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 290

 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 131/218 (60%), Gaps = 3/218 (1%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           ++  I  D  L     ++ Q    L++A+ Y L  GGKKIRS ++ +  ++F +N+ T +
Sbjct: 4   KLARIAKDTNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKINYKTLI 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +GAA+ECIH YSLIHDDLP MD+  IRRGK + HI++ E TA++AGN LLT AFEI+ S
Sbjct: 64  SIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMAFEILVS 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCF 191
              +L + I+  L+  L+   G  G+ GGQ LD+  E    ++  +  ++  KTG L  F
Sbjct: 124 SSLKLNEKIKVDLIKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEIKKTGKLFSF 183

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            C    I+   S  + +     G N+G++FQ+ADDL+D
Sbjct: 184 CCTVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLID 221


>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1]
 gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1]
          Length = 294

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 3/194 (1%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RY+LL GGK++R  L   C          A+    A+EC+H YSLIHDDLP+MDN
Sbjct: 32  LTGAMRYSLLIGGKRLRPILTLACCEAVGGALERAMNFACAMECVHTYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG PT H QY E TAI+AG+ LLT+AFE+ + P T +    R +L+  L    G  
Sbjct: 92  DDLRRGHPTCHRQYGEATAILAGDALLTHAFELAAKPVTGVLPEARLELIGELAMAAGTY 151

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQMLDIQ E   ++  Q+  I   KTGAL+  AC +GA +   + ++ + L+ +GE
Sbjct: 152 GMVGGQMLDIQGEKRPLELVQLQNIHIHKTGALIRVACLAGARLGGGTPDQVKHLKRYGE 211

Query: 216 NLGIIFQLADDLLD 229
            LG+ FQ+ DD+LD
Sbjct: 212 ALGLAFQITDDILD 225


>gi|110677933|ref|YP_680940.1| geranyltranstransferase [Roseobacter denitrificans OCh 114]
 gi|109454049|gb|ABG30254.1| geranyltranstransferase [Roseobacter denitrificans OCh 114]
          Length = 289

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/201 (41%), Positives = 126/201 (62%), Gaps = 11/201 (5%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           ++ A+ +A  GGK++R FLV E A L ++    A+    AIE +H YSL+HDDLP MDN 
Sbjct: 29  IVEAMAHATSGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDND 88

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG+PTVH ++D+ TA++AG+ L T AFE+++ P       +R+ L LSL    G QG
Sbjct: 89  DMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASASAEVRADLALSLARASGAQG 148

Query: 159 MLGGQMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           M+ GQ LDI  E       +DE  +  +Q+ KTGAL+ ++ ++GA +A   Q +   L+ 
Sbjct: 149 MVLGQALDIAAETARAPLSLDE--ITRLQQGKTGALIGWSAQAGARLA---QADTAALKR 203

Query: 213 FGENLGIIFQLADDLLDCEED 233
           + + LG+ FQ+ADD+LD   D
Sbjct: 204 YAQALGLAFQIADDILDVTGD 224


>gi|304570553|ref|YP_266034.2| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 290

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 3/218 (1%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           ++  I  D  L     ++ Q    L++A+ Y L  GGKKIRS ++ +  ++F +N+ T +
Sbjct: 4   KLARIAKDTNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKINYKTLI 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +GAA+ECIH YSLIHDDLP MD+  IRRGK + HI++ E TA++AGN LLT AFEI+ S
Sbjct: 64  SIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMAFEILVS 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCF 191
              ++ + I+  L+  L+   G  G+ GGQ LD+  E    ++  +  ++  KTG L  F
Sbjct: 124 SSLKINEKIKVDLVKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEIKKTGKLFSF 183

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            C    I+   S  + +     G N+G++FQ+ADDL+D
Sbjct: 184 CCAVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLID 221


>gi|146292379|ref|YP_001182803.1| polyprenyl synthetase [Shewanella putrefaciens CN-32]
 gi|145564069|gb|ABP75004.1| farnesyl-diphosphate synthase [Shewanella putrefaciens CN-32]
          Length = 293

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 136/228 (59%), Gaps = 8/228 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE   R+DT L     Q  S ++     +L +A++Y ALLGGK+IR FLV     
Sbjct: 2   LASTIQEYQLRVDTQLK----QRFSTLE-DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AFEI++   + +       ++ +L    G +GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVSGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            MKTGAL+  A E   I A+A +++ + +  F   +G+ FQ+ DD+LD
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILD 224


>gi|212636370|ref|YP_002312895.1| polyprenyl synthetase [Shewanella piezotolerans WP3]
 gi|212557854|gb|ACJ30308.1| Polyprenyl synthetase [Shewanella piezotolerans WP3]
          Length = 293

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 125/197 (63%), Gaps = 3/197 (1%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + +L +A+++ AL+GGK+IR FLV     + NV   T     AAIEC+H YSLIHDDLP+
Sbjct: 28  DPKLKAAMKHGALIGGKRIRPFLVYAIGEMLNVKLETLDSCAAAIECVHAYSLIHDDLPA 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PTVHI YDE TAI+AG+ L   AFEIIS P   +  +    ++ +L +  
Sbjct: 88  MDDDALRRGQPTVHIAYDEATAILAGDALQALAFEIISEPIKNIAPSQNLAMVKALANAS 147

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM GGQ +D+   D+ I+   +  + K+KTGAL+  A E   I A  + +E++ L  
Sbjct: 148 GYSGMCGGQAMDLSATDKQIELATLIQLHKLKTGALIRCAVEFAIIAAKINDDERQALVD 207

Query: 213 FGENLGIIFQLADDLLD 229
           F + +G+ FQ+ DD+LD
Sbjct: 208 FADAIGLAFQVQDDVLD 224


>gi|319425679|gb|ADV53753.1| Polyprenyl synthetase [Shewanella putrefaciens 200]
          Length = 293

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 135/228 (59%), Gaps = 8/228 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE   R+DT L     Q  S ++     +L +A++Y ALLGGK+IR FLV     
Sbjct: 2   LASTIQEYQLRVDTQLK----QRFSTLE-DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AFEI++     +       ++ +L    G +GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            MKTGAL+  A E   I A+A +++ + +  F   +G+ FQ+ DD+LD
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILD 224


>gi|294013329|ref|YP_003546789.1| geranyltranstransferase [Sphingobium japonicum UT26S]
 gi|292676659|dbj|BAI98177.1| geranyltranstransferase [Sphingobium japonicum UT26S]
          Length = 305

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/199 (46%), Positives = 131/199 (65%), Gaps = 3/199 (1%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+R+A + GGK++R  LV   + LFN++  +ALRVG A+ECIH YSL+HDDLP+MD
Sbjct: 42  RLYEAMRHAAMDGGKRLRPLLVQAASDLFNISRESALRVGVAVECIHVYSLVHDDLPAMD 101

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH  +DE TAI+AG+ L   AFEI++  +T     +R +L+ +L    G 
Sbjct: 102 DDDMRRGKPTVHRAFDEATAILAGDCLHDLAFEILADEETHPDPFVRIELVKALAVASGT 161

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM GGQM+D++ E    D   V  +Q++KTGAL+    ++ AIMA      + RL  + 
Sbjct: 162 SGMAGGQMMDLEAEKASFDLPTVTRLQQLKTGALIAVCVDAAAIMALIPPEGRMRLHGYA 221

Query: 215 ENLGIIFQLADDLLDCEED 233
            ++G+ FQ+ADDLLD E D
Sbjct: 222 RDIGLAFQIADDLLDVEGD 240


>gi|83312002|ref|YP_422266.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
           AMB-1]
 gi|82946843|dbj|BAE51707.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 301

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 151/237 (63%), Gaps = 8/237 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L   L   S+ +++ LD LL  + S      + R+  A+RY  L GGK++R FLV 
Sbjct: 6   MSPRLTEALTVVSQAVNSELDRLLPVSESP-----DSRVHEAMRYVTLDGGKRLRPFLVM 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           + ASLFNV    A+RV  AIE IHCYSL+HDDLP MD+  +RRG+PT H  +DE TA++A
Sbjct: 61  QSASLFNVAESAAIRVACAIEMIHCYSLVHDDLPCMDDDDLRRGRPTCHKAFDEATALLA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT AFE++ +P T     +R +L+  L H  G QGM+GGQM+D+Q     +D   +
Sbjct: 121 GDALLTKAFEVLVNPATHADPAVRCELVADLAHASGGQGMVGGQMIDLQAHTLDLDVAGI 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             +Q++KTG L  F+CE+GA++  A    +  LR +  +LG+ FQ+ADD+LD E D+
Sbjct: 181 TRLQQLKTGRLFSFSCEAGAVLGKAHGELRLALRNYAHDLGLAFQIADDILDVEGDV 237


>gi|83942134|ref|ZP_00954596.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36]
 gi|83847954|gb|EAP85829.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36]
          Length = 312

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 9/196 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+RYA+ GGK +R+FLV E A L  V    A     AIE +H YSL+HDD+P MD+  +R
Sbjct: 57  AMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDDDALR 116

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PTVH+++DE TA++AG+ L T AFE++++  T   D  R  L+  L    G++GM+G
Sbjct: 117 RGQPTVHVKWDEATAVLAGDALQTLAFELVAA--TGCGDAERVALVTGLARAAGVRGMVG 174

Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ +DI  E   +     Q+  +Q  KTGAL+ +A  +G +MA    ++   LR +  NL
Sbjct: 175 GQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMA---GDDAAALRSYARNL 231

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ADD+LD E D
Sbjct: 232 GLAFQIADDILDVEGD 247


>gi|162147645|ref|YP_001602106.1| geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542274|ref|YP_002274503.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786222|emb|CAP55804.1| Geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529951|gb|ACI49888.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 311

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/229 (41%), Positives = 137/229 (59%), Gaps = 8/229 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
           L S L   +  I+  +D LL             R++ A+RYA LGG K++R +L  E AS
Sbjct: 20  LRSSLSNRATAIEAAIDSLLPPVPGA-----EGRVVDAMRYATLGGGKRLRGYLTAEVAS 74

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF V    A RV A++E +H YSL+HDDLP+MDN  +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 75  LFGVEPARAYRVAASVEMLHAYSLVHDDLPAMDNDDLRRGQPSTHRKFDEATAILAGDAL 134

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
            T AFEI++   T     IR  L+ +L    G  GM+GGQM+D+  E   +   +V  + 
Sbjct: 135 QTMAFEILTDTATHPSATIRIGLVAALAAASGAAGMVGGQMIDMDGEGRALSLPEVERLH 194

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +KTG L+ +A E+GAI+  A    + R+  +G +LG  FQ+ADD+LD 
Sbjct: 195 ALKTGCLIRYAAEAGAILGDADLPARARIAAYGRDLGAAFQIADDVLDA 243


>gi|85373942|ref|YP_458004.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594]
 gi|84787025|gb|ABC63207.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594]
          Length = 305

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 8/235 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S L   ++ ID + D +LL      +      L+ A+RY A+ GGK++R  LV   A 
Sbjct: 14  LSSALNRIARDIDAVFD-VLLPVPDDTRAP----LVEAMRYSAMDGGKRVRPLLVVATAE 68

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +  V+   ALRVG A+E IH YSLIHDDLP MD+  +RRGK T+H  YDE TA++AG+ L
Sbjct: 69  MLGVSRDPALRVGCAVEAIHVYSLIHDDLPCMDDDELRRGKATLHKAYDEATAVLAGDSL 128

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
              AFEI++  +T      +++L+ +L    G+ GM GGQM+D+  E  D     +  +Q
Sbjct: 129 HALAFEILTDDETTPDPFTQAELVRTLAAASGMAGMAGGQMMDMAAESADYDLHTITRLQ 188

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++KTGAL+  + E GAI+A   +  +  LR +  ++G+ FQ+ADDLLD E D  K
Sbjct: 189 QLKTGALLAASVEMGAILAKIPREGRSHLRAYARDIGLAFQIADDLLDAEGDEEK 243


>gi|126173596|ref|YP_001049745.1| polyprenyl synthetase [Shewanella baltica OS155]
 gi|125996801|gb|ABN60876.1| farnesyl-diphosphate synthase [Shewanella baltica OS155]
          Length = 293

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 131/228 (57%), Gaps = 8/228 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE  +R+D  L   L  T  H   Q    L +A+ Y ALLGGK+IR FLV     
Sbjct: 2   LVSAIQEYQQRVDNQLKQRL-STLEHTAPQ----LKAAMTYGALLGGKRIRPFLVYSVGR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AFEI++     +       ++  L    G +GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            MKTGAL+  A E   I A+A +++   +  F   +G+ FQ+ DD+LD
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILD 224


>gi|114326884|ref|YP_744041.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1]
 gi|114315058|gb|ABI61118.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1]
          Length = 309

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 141/231 (61%), Gaps = 9/231 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L   L   +  ++  LD LL      +      R++ A+RYA+L GGK++R+FLV E A+
Sbjct: 17  LKEALTRRAHEVEAALDRLL-----PVPPGPESRVVEAMRYAVLNGGKRLRAFLVLESAA 71

Query: 64  LFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           LF+     + +R  A++E +H YSL+HDDLP+MD+  +RRGKP+ H  +DE TAI+AG+ 
Sbjct: 72  LFDGAAAESGVRAAASVEMLHAYSLVHDDLPAMDDDDLRRGKPSAHRAFDEATAILAGDA 131

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
           L T AFE+++   T      R  L+L+L   +G  GM+GGQM+D+  E   +   QV  +
Sbjct: 132 LQTSAFELLADAATHPDPAARCALVLALARAVGADGMVGGQMIDMASEGRALTAEQVGRL 191

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +KTG L+ ++ E+G I+  A+  ++E L  +G +LG  FQ+ DD+LD E
Sbjct: 192 HALKTGRLIQYSAEAGGILGAATPAQQEALASYGRDLGAAFQIVDDILDTE 242


>gi|83953189|ref|ZP_00961911.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp.
           NAS-14.1]
 gi|83842157|gb|EAP81325.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp.
           NAS-14.1]
          Length = 301

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 9/196 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+RYA+ GGK +R+FLV E A L  V    A     AIE +H YSL+HDD+P MD+  +R
Sbjct: 46  AMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDDDALR 105

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PTVH+++DE TA++AG+ L T AFE++++  T   D  R  L+  L    G++GM+G
Sbjct: 106 RGQPTVHVKWDEATAVLAGDALQTLAFELVAA--TGCGDAERVALVTGLARAAGVRGMVG 163

Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ +DI  E   +     Q+  +Q  KTGAL+ +A  +G +MA    ++   LR +  NL
Sbjct: 164 GQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGPVMA---GDDAAALRSYARNL 220

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ADD+LD E D
Sbjct: 221 GLAFQIADDILDVEGD 236


>gi|73667184|ref|YP_303200.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake]
 gi|72394325|gb|AAZ68602.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake]
          Length = 283

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 4/216 (1%)

Query: 23  LLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           LL+Q    M  ++N D LL++IRY++   GK IR FLV   A +F+VN    L V AA+E
Sbjct: 23  LLIQKLESMLPENNQDILLTSIRYSIFSPGKHIRPFLVNAVAQMFDVNVDRTLPVSAAVE 82

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP MDN  IRRG+ + H +++E  AI+ G+ LLT AFEI+S+       
Sbjct: 83  IIHVYSLIHDDLPGMDNEEIRRGQASSHKKFNEAVAILTGDALLTLAFEILSTINE--SP 140

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            IR +++ +L H IG QGM+ GQ+LD +    D  ++  I  +KT       CE G I+ 
Sbjct: 141 LIRCRIIKTLAHAIGYQGMIQGQILDTETIAKDINEIQNIHVLKTAQFFSAICELGGILG 200

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +AS  +   L  +G NLG  FQ+ DD+ D ++D  K
Sbjct: 201 NASNIQLNALANYGLNLGHAFQIKDDIADEDQDKSK 236


>gi|294139891|ref|YP_003555869.1| geranyltranstransferase [Shewanella violacea DSS12]
 gi|293326360|dbj|BAJ01091.1| geranyltranstransferase [Shewanella violacea DSS12]
          Length = 293

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 132/219 (60%), Gaps = 8/219 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72
           +R+D+ L+ ++       QT  + +LL+AI++ ALLGGK+IR FLV     + N+     
Sbjct: 11  QRVDSQLEKII-----DAQTITDPKLLAAIKHGALLGGKRIRPFLVYAIGDMLNIPLKKL 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AAIEC+H YSLIHDDLP+MD+  +RRG+PTVH+ +DE TAI+AG+ L    FEII 
Sbjct: 66  DSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDALQALGFEIIC 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190
            P   ++ +    ++ +L    G  GM GGQ +D+   D+ ID   +  + K+KTGAL+ 
Sbjct: 126 EPIDGIEPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLHKLKTGALIR 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A E   I A  S  E+  L  F + +G+ FQ+ DD+LD
Sbjct: 186 CAVELPMIAAQVSPEEQTLLLEFADTIGLAFQVQDDVLD 224


>gi|58038726|ref|YP_190690.1| dimethylallyltransferase [Gluconobacter oxydans 621H]
 gi|58001140|gb|AAW60034.1| Dimethylallyltransferase [Gluconobacter oxydans 621H]
          Length = 301

 Score =  161 bits (407), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/218 (44%), Positives = 137/218 (62%), Gaps = 8/218 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74
           I++ +D LL      M       L+ A+RYA LGG K++R FL  E A+LF  +   ALR
Sbjct: 21  IESTIDTLL-----PMVPGDESVLIEAMRYAALGGGKRLRGFLAVEVATLFGADRKAALR 75

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V A++E +H YSL+HDDLPSMD+  +RRG+P+ H Q+DE  AI+AG+ L T AFEI+  P
Sbjct: 76  VAASVELLHAYSLVHDDLPSMDDDDLRRGQPSTHKQFDEAIAILAGDALQTRAFEILVEP 135

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFA 192
           +T     +R+ L L+L    G  GM+GGQ++DI+ E   +   QV  +  +KTGAL+ +A
Sbjct: 136 ETSPNATVRANLALALAQASGSAGMVGGQVIDIRGEGRALPLDQVRRLHALKTGALIRYA 195

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ESGAI+A      +  +  +G +LG  FQ+ADD+LD 
Sbjct: 196 AESGAILADVDDARRAAIVAYGRDLGTAFQVADDVLDS 233


>gi|120599627|ref|YP_964201.1| polyprenyl synthetase [Shewanella sp. W3-18-1]
 gi|120559720|gb|ABM25647.1| farnesyl-diphosphate synthase [Shewanella sp. W3-18-1]
          Length = 293

 Score =  161 bits (407), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 134/228 (58%), Gaps = 8/228 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE   R+DT L     Q  S ++     +L +A++Y ALLGGK+IR FLV     
Sbjct: 2   LASTIQEYQLRVDTQLK----QRFSTLE-DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AFEI++     +       ++ +L    G +GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            MKTGAL+  A E   I  +A +++ + +  F   +G+ FQ+ DD+LD
Sbjct: 177 NMKTGALISCAVELALIAVNAPKDQYQTMMTFAHAVGLAFQVQDDILD 224


>gi|144900826|emb|CAM77690.1| geranyltranstransferase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 296

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/199 (48%), Positives = 137/199 (68%), Gaps = 3/199 (1%)

Query: 38  RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+  A+RY AL GGK++R FL  + ASLFNV+   ALRVG A+E +HCYSLIHDDLP MD
Sbjct: 33  RVHDAMRYSALDGGKRLRPFLTVQAASLFNVSPAAALRVGCALEMVHCYSLIHDDLPCMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT H Q+DE TA++AG+ L + AFE++++  T     +R +L+  L H  G 
Sbjct: 93  DDDLRRGRPTCHRQFDEATALLAGDALQSRAFEVLAAESTHPDPAVRCELVWQLAHAAGG 152

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQM+D+Q     +D   +  +Q+MKTG L+ FACE+GAI+  A  + +  L+ + 
Sbjct: 153 MGMVGGQMVDLQAAQLTMDMADITRLQQMKTGRLIGFACEAGAILGKAPSSLRLALKNYA 212

Query: 215 ENLGIIFQLADDLLDCEED 233
            +LG+ FQ+ADDLLD + D
Sbjct: 213 HDLGLAFQIADDLLDVQGD 231


>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
 gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
          Length = 315

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 9/201 (4%)

Query: 40  LSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + A+RY+LL GGK++R  L    A     +    L V  A+ECIH YSLIHDDLP+MDN 
Sbjct: 52  IEAMRYSLLAGGKRVRPILCLAAAEAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDND 111

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNIGL 156
            +RRG PT H ++ E  AI+AG+GLL++AFE+++ P  +      +QL L  ++   +G 
Sbjct: 112 DLRRGMPTSHKKFGEAAAILAGDGLLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGP 171

Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           +GM+GGQ+LDI+ E     +DE Q   I + KTGAL+  A ++GAI   AS+ + + L  
Sbjct: 172 RGMVGGQVLDIEAEGRRLELDELQ--QIHRHKTGALITAAVQAGAIGGGASETQLQALTR 229

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G+  G+ FQ+ DDLL+   D
Sbjct: 230 YGQQTGLAFQIVDDLLNVTSD 250


>gi|58617311|ref|YP_196510.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
           Gardel]
 gi|58416923|emb|CAI28036.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
           Gardel]
          Length = 276

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 3/206 (1%)

Query: 32  QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  H+D LL++++Y+L   GK IR FLV   A +FNVN    L V  AIE IH YSLIHD
Sbjct: 26  KADHDDILLASMKYSLFTPGKYIRPFLVNASAQIFNVNIDRTLPVSVAIELIHVYSLIHD 85

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP MDN   RRG+ + H ++ E  AI+ G+ LLT AFE++S+        IR +++  L
Sbjct: 86  DLPGMDNEDTRRGQLSSHKKFTEAIAILTGDALLTLAFEVLSTINES--PYIRCRIIQVL 143

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           T  IG QGM+ GQ+LD +    D   +  +  +KT  L   ACE G I+  AS  E   L
Sbjct: 144 TQAIGYQGMIKGQVLDTETIAKDINDIKTMHTLKTACLFSAACEVGGILGGASDTELNSL 203

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
           + +G NLG  FQ+ DD+ D  +D+ K
Sbjct: 204 KNYGLNLGFAFQIKDDIADICKDISK 229


>gi|57239293|ref|YP_180429.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579257|ref|YP_197469.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161372|emb|CAH58295.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417883|emb|CAI27087.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 276

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 3/206 (1%)

Query: 32  QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  H+D LL++++Y+L   GK IR FLV   A +FNVN    L V  AIE IH YSLIHD
Sbjct: 26  KADHDDILLASMKYSLFTPGKYIRPFLVNASAQIFNVNIDRTLPVSVAIELIHVYSLIHD 85

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP MDN   RRG+ + H ++ E  AI+ G+ LLT AFE++S+        IR +++  L
Sbjct: 86  DLPGMDNEDTRRGQLSSHKKFTEAIAILTGDALLTLAFEVLSTINES--PYIRCRIIQVL 143

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           T  IG QGM+ GQ+LD +    D   +  +  +KT  L   ACE G I+  AS  E   L
Sbjct: 144 TQAIGYQGMIKGQVLDTETIAKDINDIKTMHTLKTACLFSAACEVGGILGGASDTELNSL 203

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
           + +G NLG  FQ+ DD+ D  +D+ K
Sbjct: 204 KNYGLNLGFAFQIKDDIADICKDISK 229


>gi|170727812|ref|YP_001761838.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908]
 gi|169813159|gb|ACA87743.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908]
          Length = 293

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 124/201 (61%), Gaps = 3/201 (1%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q+  + +LL+A+++ AL+GGK+IR FLV     + NV         AAIECIH YSLIHD
Sbjct: 24  QSVTDSQLLAAMKHGALIGGKRIRPFLVYAIGEMLNVPQEKLDAAAAAIECIHAYSLIHD 83

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MD+  +RRG+PTVH+ +DE TAI+AG+ L   AF+I+S P   L       ++ +L
Sbjct: 84  DLPAMDDDALRRGQPTVHVAFDEATAILAGDALQALAFDILSQPIDGLTPTQNLAMVRAL 143

Query: 151 THNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G  GM GGQ +D+   D+ ID   +  + K+KTGAL+  A E   I A   ++E+ 
Sbjct: 144 AKASGYSGMCGGQAMDLNATDKQIDLATLTQLHKLKTGALIRCAVELPMIAADLPKDEQA 203

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  F + +G+ FQ+ DD++D
Sbjct: 204 LLMTFADAVGLAFQVQDDVID 224


>gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B]
 gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B]
          Length = 293

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/227 (42%), Positives = 133/227 (58%), Gaps = 14/227 (6%)

Query: 9   LQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASL 64
           L +   R+D +L    D L QTA  ++        +A+R+ AL+GGK+IR FLV     L
Sbjct: 6   LADCQSRVDAVLAAHIDALPQTAPALK--------AAMRHGALIGGKRIRPFLVYAVGEL 57

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V+     R+ AA+EC+H YSLIHDDLP+MD+  +RRGKPTVHI +DE TAI+AG+ L 
Sbjct: 58  LGVDKAKLDRLAAAVECVHAYSLIHDDLPAMDDDNLRRGKPTVHIAFDEATAILAGDALQ 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182
           T AFEIIS     L    +  ++ +L    G  GM GGQ LD+  E   I   ++  +  
Sbjct: 118 TLAFEIISESDAGLAPKAQVAMIAALARASGYLGMCGGQALDLAGEGKSISLDELTRLHN 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KTGAL+  A E   I A AS  +   LR + + +G+ FQ+ DD+LD
Sbjct: 178 LKTGALIRAAVELALIAADASDADTAALRAYADAIGLAFQVQDDILD 224


>gi|254488785|ref|ZP_05101990.1| geranyltranstransferase [Roseobacter sp. GAI101]
 gi|214045654|gb|EEB86292.1| geranyltranstransferase [Roseobacter sp. GAI101]
          Length = 301

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/202 (43%), Positives = 127/202 (62%), Gaps = 9/202 (4%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + ++  A+RYA+ GGK +R+FLV E A L  V    A     AIE +H YSL+HDD+P M
Sbjct: 40  DGQIAEAMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCM 99

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+PTVH+++DEVTA++AG+ L   AFE+ +  +T   D  R  L+  L H  G
Sbjct: 100 DNDDLRRGQPTVHVKWDEVTAVLAGDALQALAFELAA--QTGCSDAGRVALVAGLAHASG 157

Query: 156 LQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           ++GM+GGQ LDI  E         Q+  +Q  KTGAL+ +A  +G +MA   +++   L+
Sbjct: 158 VRGMVGGQALDIAAESASVPLTLDQITTLQAGKTGALIEWAATAGPVMA---RDDPRPLQ 214

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +  +LG+ FQ+ADD+LD E D
Sbjct: 215 RYARDLGLAFQIADDILDIEGD 236


>gi|88859185|ref|ZP_01133826.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas tunicata D2]
 gi|88819411|gb|EAR29225.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas tunicata D2]
          Length = 296

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/231 (47%), Positives = 144/231 (62%), Gaps = 16/231 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           EN  R++ +LD LL Q     QT     LL+A RY+LL GGK++R  +V     +F  N 
Sbjct: 9   ENQLRVEGVLDTLLTQPMITDQT-----LLAASRYSLLNGGKRMRPCMVYVTGEIFGANP 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                V AAIECIH YSL+HDDLP+MD+  +RRG PT HI YDE TAI+AG+ L T+AFE
Sbjct: 64  DDLDLVAAAIECIHSYSLVHDDLPAMDDDDLRRGMPTCHIAYDEATAILAGDALQTFAFE 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           I+SS K +    I +Q  ++L  N+    GL+GM GGQ LDI      I+ TQ+  I ++
Sbjct: 124 ILSSSKFK---TINAQQQVALIANLASASGLRGMCGGQALDIAATNCAINLTQLEQIHQL 180

Query: 184 KTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  A   GAI A  +  E  + L+ FGEN+G+ FQ+ DD+LD E D
Sbjct: 181 KTGALLTSAILMGAICAPKTTPEILQNLKIFGENIGLAFQVQDDILDIEGD 231


>gi|85703102|ref|ZP_01034206.1| farnesyl diphosphate synthase [Roseovarius sp. 217]
 gi|85672030|gb|EAQ26887.1| farnesyl diphosphate synthase [Roseovarius sp. 217]
          Length = 287

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 118/195 (60%), Gaps = 8/195 (4%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +RYA  GGK+IR FL+ E A L  V   +AL    AIE +H YSL+HDDLP+MDN  +RR
Sbjct: 32  MRYATQGGKRIRGFLLMESARLHAVPETSALWPATAIEALHAYSLVHDDLPAMDNDDLRR 91

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+PTVH+++DE TAI+ G+ L + AFE+++ P       +R+ L L+L    G QGM+ G
Sbjct: 92  GQPTVHVKWDEATAILVGDALQSLAFELVAHPDCG-PAAVRADLTLTLARAAGGQGMVLG 150

Query: 163 QMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           Q LDI  E         ++  +Q  KTGAL+ ++  +GA MA A   +   L  +   LG
Sbjct: 151 QALDIAAETATTPLSLDEITTLQAGKTGALILWSATAGARMAMA---DSAPLSTYARALG 207

Query: 219 IIFQLADDLLDCEED 233
           + FQ+ DD++D   D
Sbjct: 208 LAFQIQDDVIDVTGD 222


>gi|254419553|ref|ZP_05033277.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
 gi|196185730|gb|EDX80706.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
          Length = 301

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 1/195 (0%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA LG GK++R F   E A LFN++  + LR   A+EC+H YSL+HDDLP MD
Sbjct: 39  RLTEAMRYAALGPGKRLRPFFALEAARLFNIDERSVLRAACALECVHAYSLVHDDLPCMD 98

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVH  YDE TA++AG+ L T AF+II    T     +R +L   L+   G 
Sbjct: 99  DDDMRRGRPTVHRAYDEATAVLAGDALQTAAFDIILHEDTHEDAVVRCELAARLSMASGA 158

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +GM GGQM+D+     D   V  +Q++KTGAL  +A E   I+A AS   +  L  F  +
Sbjct: 159 RGMAGGQMIDLLGVRDDLGGVARMQRLKTGALFAYAFEIPLIIAEASAQHQHALISFAHD 218

Query: 217 LGIIFQLADDLLDCE 231
           +G+ +Q+ DDLLD E
Sbjct: 219 VGLAYQIVDDLLDAE 233


>gi|149184810|ref|ZP_01863128.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
 gi|148832130|gb|EDL50563.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
          Length = 296

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 128/202 (63%), Gaps = 3/202 (1%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ A+RYA +GG K++R  LV   A LF V+   A+  G A+E IH YSLIHDDLP MD
Sbjct: 33  RLVEAMRYAAIGGGKRVRPLLVCATAKLFGVDRDAAVAAGCAVEAIHAYSLIHDDLPCMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +R GKPT+H  YDE TA++AG+ L   AF+I++ P       +R++L+ +L    G 
Sbjct: 93  DDDLRHGKPTLHKVYDEATAVLAGDCLHALAFDILTMPGISNDPFVRAELVATLAKASGH 152

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM GGQM+DI   +E  D  QV  +Q++KTGAL+  + E GA++       +  LR + 
Sbjct: 153 EGMAGGQMMDIVSDEEEYDIRQVTRLQQLKTGALLAASVEMGAVLGKLPPEGRTHLRAYA 212

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
            ++G+ FQ+ADDLLD E D  K
Sbjct: 213 RDIGLAFQIADDLLDVEGDETK 234


>gi|188581709|ref|YP_001925154.1| polyprenyl synthetase [Methylobacterium populi BJ001]
 gi|179345207|gb|ACB80619.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
          Length = 320

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/239 (43%), Positives = 145/239 (60%), Gaps = 11/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
            G    +L   +  ++T L DLL  T    +     RL+ A+R+A+LGG K++R FL  E
Sbjct: 17  TGDFTHRLAGVADTVETFLVDLLGPTLQTGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A +       AL  GA +E +HCYSL+HDDLP+MD+  +RRGKPTVH  YDE TAI+ G
Sbjct: 77  TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--------I 172
           + L T AFE+ + P+ Q    IR++L+L L    GL GM+GGQ+LD+  E         I
Sbjct: 137 DALQTLAFEVTADPRWQPDPMIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPADMDI 196

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           D+T    +Q MKTGA++ F+ E+GA++  A   E+  L  +G+ LG  FQ+ADD+LD E
Sbjct: 197 DDT--LRMQAMKTGAILAFSVEAGALVGGAGAEERAALLRYGKALGQAFQVADDILDRE 253


>gi|46015555|pdb|1RTR|A Chain A, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate
           Synthase
 gi|46015556|pdb|1RTR|B Chain B, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate
           Synthase
          Length = 301

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 64  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 183 TFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|57650478|ref|YP_186407.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL]
 gi|87160564|ref|YP_494166.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195328|ref|YP_500132.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221639|ref|YP_001332461.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509750|ref|YP_001575409.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140058|ref|ZP_03564551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|258451179|ref|ZP_05699214.1| geranyltranstransferase [Staphylococcus aureus A5948]
 gi|262049107|ref|ZP_06021984.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30]
 gi|262051188|ref|ZP_06023412.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3]
 gi|282924770|ref|ZP_06332437.1| geranyltranstransferase [Staphylococcus aureus A9765]
 gi|284024581|ref|ZP_06378979.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 132]
 gi|294848552|ref|ZP_06789298.1| geranyltranstransferase [Staphylococcus aureus A9754]
 gi|304380890|ref|ZP_07363550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|57284664|gb|AAW36758.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL]
 gi|87126538|gb|ABD21052.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202886|gb|ABD30696.1| geranyltranstransferase, putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374439|dbj|BAF67699.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368559|gb|ABX29530.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257861234|gb|EEV84047.1| geranyltranstransferase [Staphylococcus aureus A5948]
 gi|259160825|gb|EEW45845.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3]
 gi|259162776|gb|EEW47341.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30]
 gi|269941012|emb|CBI49396.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282592777|gb|EFB97783.1| geranyltranstransferase [Staphylococcus aureus A9765]
 gi|294824578|gb|EFG41001.1| geranyltranstransferase [Staphylococcus aureus A9754]
 gi|304340617|gb|EFM06551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|315198784|gb|EFU29112.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS01]
 gi|329314199|gb|AEB88612.1| Geranyltranstransferase [Staphylococcus aureus subsp. aureus T0131]
 gi|329728330|gb|EGG64767.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21189]
          Length = 293

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 64  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 183 TFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|152999876|ref|YP_001365557.1| polyprenyl synthetase [Shewanella baltica OS185]
 gi|160874501|ref|YP_001553817.1| polyprenyl synthetase [Shewanella baltica OS195]
 gi|217974160|ref|YP_002358911.1| polyprenyl synthetase [Shewanella baltica OS223]
 gi|151364494|gb|ABS07494.1| Polyprenyl synthetase [Shewanella baltica OS185]
 gi|160860023|gb|ABX48557.1| Polyprenyl synthetase [Shewanella baltica OS195]
 gi|217499295|gb|ACK47488.1| Polyprenyl synthetase [Shewanella baltica OS223]
 gi|315266739|gb|ADT93592.1| Polyprenyl synthetase [Shewanella baltica OS678]
          Length = 293

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 133/228 (58%), Gaps = 8/228 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE  +R+D    + L Q  S ++     +L +A+ Y ALLGGK+IR FLV     
Sbjct: 2   LVSAIQEYQQRVD----NQLKQRFSTLE-DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AFEI++     +       ++  L    G +GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            MKTGAL+  A E   I A+A +++   +  F   +G+ FQ+ DD+LD
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILD 224


>gi|302751353|gb|ADL65530.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|320140593|gb|EFW32447.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144130|gb|EFW35899.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MRSA177]
          Length = 288

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 2   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 58

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 59  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 118

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 119 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 177

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 178 TFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224


>gi|283470800|emb|CAQ50011.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Staphylococcus aureus subsp. aureus ST398]
          Length = 293

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  H  
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTKHEL 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 64  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   I+   + MI K KTGAL+
Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALL 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|163760025|ref|ZP_02167109.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
 gi|162282983|gb|EDQ33270.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
          Length = 305

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/198 (51%), Positives = 138/198 (69%), Gaps = 3/198 (1%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+R+ +L GGK++R FLV E A +       ALRV AA+ECIHCYSL+HDDLP+MD+
Sbjct: 43  LILAMRHGVLNGGKRLRPFLVIETARMLGAPEDAALRVAAALECIHCYSLVHDDLPAMDD 102

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+PTVHI +DE TAI+AG+ LLT AF++IS+P+T L  + R +L+ +L+   G+ 
Sbjct: 103 DDLRRGQPTVHIAFDEATAILAGDALLTLAFDVISAPETDLPADARLRLVNALSRAAGVG 162

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD+  E +  DE  +  +Q MKTGAL+ FAC +GAI A        R+  FGE
Sbjct: 163 GMVGGQALDLAAERVSPDEAGIVKLQAMKTGALLRFACAAGAIAAGCDDAIVARVTRFGE 222

Query: 216 NLGIIFQLADDLLDCEED 233
            +G+ FQLADDLLD   D
Sbjct: 223 IIGLAFQLADDLLDVTSD 240


>gi|67906634|gb|AAY82729.1| predicted geranyltranstransferase [uncultured bacterium
           eBACmed86H08]
          Length = 287

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 139/219 (63%), Gaps = 4/219 (1%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           K+I+ I  D+     + ++ Q    L++++ Y L  GGKKIRS ++ +   +F+V +   
Sbjct: 3   KKINKIGKDINKFLKNFLKKQKRTELITSMNYGLFPGGKKIRSKIIIDVGKIFSVPYHHL 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +RVGAA+ECIH YSLIHDDLP MDN  +RRGK + H ++ E TA++AGN LLT AFEI+S
Sbjct: 63  IRVGAAVECIHAYSLIHDDLPCMDNDDLRRGKLSTHKKFGESTAVLAGNSLLTLAFEILS 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMC 190
               ++ +  +++L+ SL++  G  G+ GGQ LD+  + + + + ++  +Q  KTG L  
Sbjct: 123 EKNFKINETKKNKLINSLSNTSGHLGIAGGQYLDLNFEKKRVSKKKIIDMQLNKTGKLFS 182

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           F+  +  I+A+ S  +  + +  G ++G++FQ+ DD LD
Sbjct: 183 FSTIAPLIIANKSA-KINQFKRIGLDIGLLFQIVDDFLD 220


>gi|49483771|ref|YP_040995.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425647|ref|ZP_05602071.1| ispA [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428308|ref|ZP_05604706.1| ispA [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430945|ref|ZP_05607325.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433634|ref|ZP_05609992.1| ispA protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257436547|ref|ZP_05612591.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876]
 gi|282904104|ref|ZP_06311992.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160]
 gi|282905931|ref|ZP_06313786.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908841|ref|ZP_06316659.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911160|ref|ZP_06318962.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914329|ref|ZP_06322115.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899]
 gi|282919298|ref|ZP_06327033.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427]
 gi|282924623|ref|ZP_06332291.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101]
 gi|283958286|ref|ZP_06375737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503404|ref|ZP_06667251.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510420|ref|ZP_06669126.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809]
 gi|293530960|ref|ZP_06671642.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428100|ref|ZP_06820732.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590934|ref|ZP_06949572.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8]
 gi|49241900|emb|CAG40594.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257271341|gb|EEV03487.1| ispA [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275149|gb|EEV06636.1| ispA [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278375|gb|EEV09011.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281727|gb|EEV11864.1| ispA protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257283898|gb|EEV14021.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876]
 gi|282313458|gb|EFB43853.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101]
 gi|282317108|gb|EFB47482.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427]
 gi|282321510|gb|EFB51835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899]
 gi|282324855|gb|EFB55165.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327105|gb|EFB57400.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331223|gb|EFB60737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595722|gb|EFC00686.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160]
 gi|283790435|gb|EFC29252.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920228|gb|EFD97294.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095070|gb|EFE25335.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466784|gb|EFF09304.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809]
 gi|295128458|gb|EFG58092.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575820|gb|EFH94536.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438010|gb|ADQ77081.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195423|gb|EFU25810.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 293

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/204 (45%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N +L  ++ Y+L  GGK+IR  L+       N  +   ++   A+E IH YSLIHDDLP+
Sbjct: 27  NTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPA 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS   +L D ++ +++  L+   
Sbjct: 87  MDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDD-RLTDEVKIKVLQRLSIAS 145

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA  S A +A+     KE L  
Sbjct: 146 GHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLES 205

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           +  +LG++FQ+ DDLLDC  D  K
Sbjct: 206 YSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
          Length = 293

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 130/201 (64%), Gaps = 5/201 (2%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q +   +L  +++Y LL GGK+IR  L    A L   N+  AL+ G+A+E IH YSLIHD
Sbjct: 26  QDELAPQLTKSMKYTLLSGGKRIRPILTLLIAELLEGNYQAALKAGSALEMIHSYSLIHD 85

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MD+  +RRGK T H+ + E TAI+AG+GLLTYAF++++    +LK +++ +++ + 
Sbjct: 86  DLPAMDDDKLRRGKKTNHLVFGEATAILAGDGLLTYAFQVLAD--LELKPDLKVKIIANT 143

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G QGM+GGQ+LD++ E  D T  ++  + + KTGAL+  +  +G   +     EK+
Sbjct: 144 AKFSGYQGMVGGQVLDLEAENKDLTLQEMQKVHQAKTGALIKASVLNGVYCSDFKPEEKK 203

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  + E +G++FQ+ DDLLD
Sbjct: 204 ALLTYAEKIGVLFQIVDDLLD 224


>gi|304409467|ref|ZP_07391087.1| Polyprenyl synthetase [Shewanella baltica OS183]
 gi|307303825|ref|ZP_07583578.1| Polyprenyl synthetase [Shewanella baltica BA175]
 gi|304351985|gb|EFM16383.1| Polyprenyl synthetase [Shewanella baltica OS183]
 gi|306912723|gb|EFN43146.1| Polyprenyl synthetase [Shewanella baltica BA175]
          Length = 293

 Score =  157 bits (398), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 133/228 (58%), Gaps = 8/228 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE  +R+D    + L Q  S ++     +L +A+ Y ALLGGK+IR FLV     
Sbjct: 2   LVSAIQEFQQRVD----NQLKQRFSTLE-DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AFEI++     +       ++  L    G +GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            MKTGAL+  A E   I A+A +++   +  F   +G+ FQ+ DD+LD
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILD 224


>gi|58584994|ref|YP_198567.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|58419310|gb|AAW71325.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 305

 Score =  157 bits (398), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 132/234 (56%), Gaps = 39/234 (16%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL+SA+RY LL   K IR FLV   + +FNV     + +  A+ECIH YSLIHDDLP M
Sbjct: 24  NRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCM 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRG+ + H ++D+ TA++AG+ LLT AFEI+SS       N R +++ +L+  IG
Sbjct: 84  DNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNE--GSNKRCEIIKALSQAIG 141

Query: 156 LQGMLGGQMLDIQD--------EFID----------------------------ETQVFM 179
            +GM+GGQ+LDI+         +++D                            ++++  
Sbjct: 142 AKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKE 201

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I  MKT  L   +CE GAI+  A+  ++  L  +G NLG+IFQ  DD+ D ++D
Sbjct: 202 IHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKDDIRDYKQD 255


>gi|21283203|ref|NP_646291.1| hypothetical protein MW1474 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486358|ref|YP_043579.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|253732175|ref|ZP_04866340.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|297207759|ref|ZP_06924194.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911840|ref|ZP_07129283.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70]
 gi|21204643|dbj|BAB95339.1| ispA [Staphylococcus aureus subsp. aureus MW2]
 gi|49244801|emb|CAG43248.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|253723964|gb|EES92693.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|296887776|gb|EFH26674.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886086|gb|EFK81288.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 293

 Score =  157 bits (398), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 64  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|323440419|gb|EGA98131.1| geranyltranstransferase [Staphylococcus aureus O11]
 gi|323443193|gb|EGB00811.1| geranyltranstransferase [Staphylococcus aureus O46]
          Length = 288

 Score =  157 bits (398), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 2   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 58

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 59  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 118

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 119 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 177

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 178 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224


>gi|253733229|ref|ZP_04867394.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253728769|gb|EES97498.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 288

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 2   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 58

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 59  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 118

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 119 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 177

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 178 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224


>gi|15924511|ref|NP_372045.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927102|ref|NP_374635.1| hypothetical protein SA1352 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268006|ref|YP_001246949.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394073|ref|YP_001316748.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979840|ref|YP_001442099.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|253314891|ref|ZP_04838104.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255006308|ref|ZP_05144909.2| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257793598|ref|ZP_05642577.1| polyprenyl synthetase [Staphylococcus aureus A9781]
 gi|258411102|ref|ZP_05681382.1| polyprenyl synthetase [Staphylococcus aureus A9763]
 gi|258420094|ref|ZP_05683049.1| polyprenyl synthetase [Staphylococcus aureus A9719]
 gi|258437354|ref|ZP_05689338.1| polyprenyl synthetase [Staphylococcus aureus A9299]
 gi|258443560|ref|ZP_05691899.1| polyprenyl synthetase [Staphylococcus aureus A8115]
 gi|258446767|ref|ZP_05694921.1| polyprenyl synthetase [Staphylococcus aureus A6300]
 gi|258448681|ref|ZP_05696793.1| polyprenyl synthetase [Staphylococcus aureus A6224]
 gi|258453498|ref|ZP_05701476.1| polyprenyl synthetase [Staphylococcus aureus A5937]
 gi|269203151|ref|YP_003282420.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893023|ref|ZP_06301257.1| geranyltranstransferase [Staphylococcus aureus A8117]
 gi|282928993|ref|ZP_06336580.1| geranyltranstransferase [Staphylococcus aureus A10102]
 gi|295406644|ref|ZP_06816449.1| geranyltranstransferase [Staphylococcus aureus A8819]
 gi|296275122|ref|ZP_06857629.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MR1]
 gi|297245773|ref|ZP_06929638.1| geranyltranstransferase [Staphylococcus aureus A8796]
 gi|13701320|dbj|BAB42614.1| ispA [Staphylococcus aureus subsp. aureus N315]
 gi|14247292|dbj|BAB57683.1| geranyltranstransferase homolog [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|147741075|gb|ABQ49373.1| farnesyl-diphosphate synthase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149946525|gb|ABR52461.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721975|dbj|BAF78392.1| geranyltranstransferase homolog [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|257787570|gb|EEV25910.1| polyprenyl synthetase [Staphylococcus aureus A9781]
 gi|257840252|gb|EEV64716.1| polyprenyl synthetase [Staphylococcus aureus A9763]
 gi|257843805|gb|EEV68199.1| polyprenyl synthetase [Staphylococcus aureus A9719]
 gi|257848559|gb|EEV72547.1| polyprenyl synthetase [Staphylococcus aureus A9299]
 gi|257850966|gb|EEV74909.1| polyprenyl synthetase [Staphylococcus aureus A8115]
 gi|257854342|gb|EEV77291.1| polyprenyl synthetase [Staphylococcus aureus A6300]
 gi|257857959|gb|EEV80848.1| polyprenyl synthetase [Staphylococcus aureus A6224]
 gi|257864229|gb|EEV86979.1| polyprenyl synthetase [Staphylococcus aureus A5937]
 gi|262075441|gb|ACY11414.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98]
 gi|282589400|gb|EFB94491.1| geranyltranstransferase [Staphylococcus aureus A10102]
 gi|282764341|gb|EFC04467.1| geranyltranstransferase [Staphylococcus aureus A8117]
 gi|285817204|gb|ADC37691.1| Geranyltranstransferase (farnesyldiphosphate synthase)
           [Staphylococcus aureus 04-02981]
 gi|294968391|gb|EFG44415.1| geranyltranstransferase [Staphylococcus aureus A8819]
 gi|297177424|gb|EFH36676.1| geranyltranstransferase [Staphylococcus aureus A8796]
 gi|312829911|emb|CBX34753.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129799|gb|EFT85789.1| hypothetical protein CGSSa03_01898 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727336|gb|EGG63792.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21172]
 gi|329730812|gb|EGG67190.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21193]
          Length = 293

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 64  GVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|157962808|ref|YP_001502842.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345]
 gi|157847808|gb|ABV88307.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345]
          Length = 293

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/197 (42%), Positives = 122/197 (61%), Gaps = 3/197 (1%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + +L +A+++ AL+GGK+IR FLV     +  V   T     AAIEC+H YSLIHDDLP+
Sbjct: 28  DPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGVKLSTLDSCAAAIECVHAYSLIHDDLPA 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PTVHI +DE TAI+AG+ L   AFEIIS P   +  +    ++ +L +  
Sbjct: 88  MDDDALRRGQPTVHIAFDEATAILAGDALQALAFEIISEPIENITPSQNLAMVRALANAS 147

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM GGQ +D+   D+ I+   +  + K+KTGAL+  A E   I A     E++ L  
Sbjct: 148 GYSGMCGGQAMDLSATDKQIELATLIQLHKLKTGALIRCAVEFAIIAAKIEGQERQALLD 207

Query: 213 FGENLGIIFQLADDLLD 229
           F + +G+ FQ+ DD+LD
Sbjct: 208 FADAIGLAFQVQDDVLD 224


>gi|68171692|ref|ZP_00545051.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88657808|ref|YP_507273.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67998884|gb|EAM85577.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599265|gb|ABD44734.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 267

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 3/215 (1%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+ Q  S +   + D LL+++RY++   GK IR FLV   A +FNVN    L V AA+E 
Sbjct: 8   LVKQLESILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEI 67

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP +DN  IRRG+ + H +++E  AI+ G+ LLT AFEI+S+        
Sbjct: 68  IHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFEILSTIDE--SPF 125

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           IR  ++ +L   +G QGM+ GQ+LD +    D   +  I  +KT      ACE G I+ +
Sbjct: 126 IRCCMIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHVLKTAQFFSVACELGGILGN 185

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AS  E   L  +G NLG  FQ+ DD+ D  +D  K
Sbjct: 186 ASNIELNALANYGLNLGHAFQVKDDIADANQDKSK 220


>gi|163749512|ref|ZP_02156760.1| geranyltranstransferase [Shewanella benthica KT99]
 gi|161330921|gb|EDQ01848.1| geranyltranstransferase [Shewanella benthica KT99]
          Length = 293

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 131/219 (59%), Gaps = 8/219 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72
           +R+D+ L+ +        QT  + +LL+A+++ ALLGGK+IR FLV     + ++     
Sbjct: 11  QRVDSQLEKIF-----DNQTVTDPKLLAAMKHGALLGGKRIRPFLVYAIGDMLSIPLKQL 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AAIEC+H YSLIHDDLP+MD+  +RRG+PTVH+ +DE  AI+AG+ L   AFE++ 
Sbjct: 66  DSSAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEAAAILAGDALQALAFEVMC 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190
            P  ++       ++ +L    G  GM GGQ +D+   ++ ID   +  + K+KTGAL+ 
Sbjct: 126 EPIDEIAPRQNLAMVRALAKASGYSGMCGGQAMDLSATNKPIDLATLSQLHKLKTGALIR 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A E   I A  SQ E+  L  F + +G+ FQ+ DD+LD
Sbjct: 186 CAVELPMIAAQVSQEEQTLLMEFADAIGLAFQVQDDVLD 224


>gi|71062428|gb|AAZ21431.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 259

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 3/190 (1%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + Y L  GGKKIRS ++ +  ++F +N+ T + +GAA+ECIH YSLIHDDLP MD+  IR
Sbjct: 1   MEYGLFPGGKKIRSKILIDIGAIFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGK + HI++ E TA++AGN LLT AFEI+ S   ++ + I+  L+  L+   G  G+ G
Sbjct: 61  RGKISTHIKFGESTAVLAGNSLLTMAFEILVSSSLKINEKIKVDLVKKLSETSGHLGIAG 120

Query: 162 GQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           GQ LD+  E    ++  +  ++  KTG L  F C    I+   S  + +     G N+G+
Sbjct: 121 GQYLDLSFEKKKVSKSKIIDMEIKKTGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIGL 180

Query: 220 IFQLADDLLD 229
           +FQ+ADDL+D
Sbjct: 181 LFQIADDLID 190


>gi|298694804|gb|ADI98026.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED133]
          Length = 293

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 64  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLEILEMIHKTKTGALL 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 297

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 131/234 (55%), Gaps = 11/234 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++ N   +D  L + L   + +    H      A+ Y++  GGK++R  L      LF  
Sbjct: 7   MKNNKNLVDQKLQEYLPNKSEYPTAIH-----EAMHYSVFAGGKRLRPLLTLAAGDLFGA 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N  T L    AIE IH YSLIHDDLP++DN  +RRGK T H+ + E  AI+AG+ LL YA
Sbjct: 62  NKKTILPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDALLNYA 121

Query: 128 FEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182
           FE+++S   +   + R+ L     +    G +GM+GGQ++DI+ E    ID   V  I K
Sbjct: 122 FELMTSKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETVSYIHK 181

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KTGAL   +   GAI++ ASQ + E+L  + + LG+ FQ+ DD+LD E D  K
Sbjct: 182 HKTGALFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQK 235


>gi|24373100|ref|NP_717143.1| geranyltranstransferase [Shewanella oneidensis MR-1]
 gi|24347286|gb|AAN54587.1|AE015598_6 geranyltranstransferase [Shewanella oneidensis MR-1]
          Length = 293

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 123/212 (58%), Gaps = 2/212 (0%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DD L Q  S ++        +    ALLGGK+IR FLV     +F V         AAI
Sbjct: 13  VDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDACAAAI 72

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           ECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFEI++     + 
Sbjct: 73  ECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGIT 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGA 197
                 ++ +L    G +GM GGQ +D+   D+ ID   +  +  MKTGAL+  A E   
Sbjct: 133 SEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKTGALISCAVELAL 192

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I A+A +++ + +  F   +G+ FQ+ DD+LD
Sbjct: 193 IAANAPKDQYQTMMEFAHAVGLAFQVQDDILD 224


>gi|302333198|gb|ADL23391.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 288

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 124/202 (61%), Gaps = 4/202 (1%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  ++ Y+L  GGK+IR  L+       N  +   ++   A+E IH YSLIHDDLP+MD
Sbjct: 24  QLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMKSAIALEMIHTYSLIHDDLPAMD 83

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGK T H  Y E TAI+AG+ LLT AFE+ISS   +L D ++ +++  L+   G 
Sbjct: 84  NDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDD-RLTDEVKIKVLQRLSIASGH 142

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA  S A +A+     KE L  + 
Sbjct: 143 VGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYS 202

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
            +LG++FQ+ DDLLDC  D  K
Sbjct: 203 YHLGMMFQIKDDLLDCYGDEAK 224


>gi|114563954|ref|YP_751468.1| polyprenyl synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114335247|gb|ABI72629.1| farnesyl-diphosphate synthase [Shewanella frigidimarina NCIMB 400]
          Length = 293

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/186 (45%), Positives = 111/186 (59%), Gaps = 2/186 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           ALLGGK+IR FLV     +  VN     +  AAIECIH YSLIHDDLP+MDN  +RRG+P
Sbjct: 39  ALLGGKRIRPFLVYSVGDMLGVNINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQP 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVHI +DE TAI+AG+ L T AFEII++P   L    +  ++  L    G QGM GGQ +
Sbjct: 99  TVHIAFDEATAILAGDALQTLAFEIITAPCNDLHPKQQLAMVRVLAKASGYQGMCGGQAI 158

Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D+   D  I+  ++  +   KTGAL+  A E   I A       + +  +   LG+ FQ+
Sbjct: 159 DLSATDHSINLDRLTELHNKKTGALISCAVELALIAADVPDEHYKLMMKYAHTLGLAFQV 218

Query: 224 ADDLLD 229
            DD+LD
Sbjct: 219 QDDILD 224


>gi|167624992|ref|YP_001675286.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167355014|gb|ABZ77627.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 293

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/197 (42%), Positives = 122/197 (61%), Gaps = 3/197 (1%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + +L +A+++ AL+GGK+IR FLV     +  V   T     AAIECIH YSLIHDDLP+
Sbjct: 28  DPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGVKLTTLDSCAAAIECIHAYSLIHDDLPA 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PTVHI +DE TAI+AG+ L   AFEIIS P   +  +    ++ +L +  
Sbjct: 88  MDDDALRRGQPTVHIAFDEATAILAGDALQALAFEIISDPIENITPSQNLAMVKALANAS 147

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM GGQ +D+   ++ I+   +  + K+KTGAL+  A E   I A     E++ L  
Sbjct: 148 GYSGMCGGQAMDLSATNKQIELATLIKLHKLKTGALIRCAVEFAIIAAKVDGQERQALLD 207

Query: 213 FGENLGIIFQLADDLLD 229
           F + +G+ FQ+ DD+LD
Sbjct: 208 FADAIGLAFQVQDDVLD 224


>gi|254293553|ref|YP_003059576.1| polyprenyl synthetase [Hirschia baltica ATCC 49814]
 gi|254042084|gb|ACT58879.1| Polyprenyl synthetase [Hirschia baltica ATCC 49814]
          Length = 303

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 145/229 (63%), Gaps = 9/229 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           L E + ++  +LD  +  +A   + Q    L+ A+R+ AL GGK++R F+  E   LF+ 
Sbjct: 15  LAECADKVTVVLDKFI-PSAIGPEAQ----LMRAMRHGALAGGKRLRPFITIEVGRLFDA 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              + LR  +A+EC+H YSL+HDDLP MD+  +RRG PTVH  +DE TA++AG+ L   A
Sbjct: 70  PEKSLLRAASALECVHAYSLVHDDLPCMDDDDLRRGLPTVHKAFDEATAVLAGDALQALA 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI---QKMK 184
           FEI+++ +T     +R +L+  L  + G +GM+GGQM+D+   F D+  + ++   Q+MK
Sbjct: 130 FEILANTETHGDAGVRCKLIEVLALSSGARGMVGGQMIDMAPSFDDKDALNILARMQRMK 189

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+  A E GAI+  A+++E + L  F  +LG+ +Q+ DDLLD + D
Sbjct: 190 TGALISCAAEFGAIIGGANEHEHQALAGFTTDLGLAYQIKDDLLDVQGD 238


>gi|82751126|ref|YP_416867.1| geranyltranstransferase [Staphylococcus aureus RF122]
 gi|258423175|ref|ZP_05686068.1| geranyltranstransferase [Staphylococcus aureus A9635]
 gi|82656657|emb|CAI81083.1| geranyltranstransferase [Staphylococcus aureus RF122]
 gi|257846625|gb|EEV70646.1| geranyltranstransferase [Staphylococcus aureus A9635]
          Length = 293

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/227 (42%), Positives = 135/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 64  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   I+   + MI K KTGAL+
Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALL 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 183 TFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047]
 gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047]
          Length = 296

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 139/240 (57%), Gaps = 19/240 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+  L    SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLETQLEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYTT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAGKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTH----NIGLQGMLGGQMLDIQDEF--IDET 175
            L ++AFEI++        NI ++  L+L      + G+QGM  GQ LD+  E   I  +
Sbjct: 117 ALQSFAFEILTKTP-----NISAEQKLALVQILAKSSGIQGMCLGQSLDLISEHKQISLS 171

Query: 176 QVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++ +I + KTGAL+  A + G I +   A +  ++ L  + E +G+ FQ+ DD+LD E D
Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAETIGLAFQVQDDILDIEGD 231


>gi|254460310|ref|ZP_05073726.1| geranyltranstransferase [Rhodobacterales bacterium HTCC2083]
 gi|206676899|gb|EDZ41386.1| geranyltranstransferase [Rhodobacteraceae bacterium HTCC2083]
          Length = 284

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 130/213 (61%), Gaps = 16/213 (7%)

Query: 34  QHNDRLLS---------AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           QH  R+LS         A+RYA  GGK++R+FLV E A +  V+   ++    AIE +H 
Sbjct: 10  QHFTRVLSSFADVPIVQAMRYATTGGKRLRAFLVRESARVCGVDVARSIAPACAIEALHA 69

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSL+HDDLP MD+  +RRG+PTVH+++D+ TA++ G+ L T AFE++S P       +RS
Sbjct: 70  YSLVHDDLPCMDDDDLRRGQPTVHVKWDDATAVLCGDALQTLAFELVSEPSCHEDPLVRS 129

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMA 200
            L L+L    G  GM+ GQ LDI+ E         Q+  +Q  KTGAL+ ++  +GA++A
Sbjct: 130 TLALTLARASGAAGMVYGQALDIEAESAANPLTIEQITELQNGKTGALITWSATAGAVLA 189

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A  N    L+ +G+ LG+ FQ+ADD+LD   D
Sbjct: 190 KADTNA---LKTYGDALGLAFQIADDILDVTSD 219


>gi|71898704|ref|ZP_00680873.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
 gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
          Length = 291

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 126/221 (57%), Gaps = 10/221 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R D+ L+  L      + TQ   RL +A+RY +L GGK+IR  LV     LF+V+    
Sbjct: 11  QRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLL 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ G+ L T AFE ++
Sbjct: 66  DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190
                   ++R   + +LTH  G+ GM GGQ LDI      +T   + ++  +K+G LM 
Sbjct: 126 DAPAD--TSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEVMHALKSGTLMR 183

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            A   GA+    S  +   L  F   LG+ FQ+ DD+LD E
Sbjct: 184 AAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIE 224


>gi|94676522|ref|YP_588724.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94219672|gb|ABF13831.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 304

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/235 (40%), Positives = 137/235 (58%), Gaps = 13/235 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L SKLQ++S  I+ +L+  L   +S      N  L++A+R AL GGK++R FL+ +   L
Sbjct: 11  LISKLQKSSNYIEIVLEQHLCTLSSK-----NKILVTAMRSALTGGKRLRPFLIYQTGKL 65

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F +   +     AAIECIH YSLIHDDLP+MDN  +RRGKPT HIQ+ E  AI+AG+ L 
Sbjct: 66  FGIKKHSLNAAAAAIECIHAYSLIHDDLPAMDNHKLRRGKPTCHIQFGEKIAILAGDALH 125

Query: 125 TYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           T AF I+++   P   +K  +R +++  L +  G  GM  GQ L+++ +F  +    V  
Sbjct: 126 TLAFTILANAQMPAIPIK--VRLKMIEILANASGANGMCLGQALELESQFKKMSAKAVET 183

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KTGAL+  A   GAI A + S+     L  +   +G+ FQ+ DDL D  ED
Sbjct: 184 IYSYKTGALIRAAVHIGAIAAGNKSKLAINYLDRYATAIGLAFQVQDDLWDISED 238


>gi|254475094|ref|ZP_05088480.1| polyprenyl synthetase [Ruegeria sp. R11]
 gi|214029337|gb|EEB70172.1| polyprenyl synthetase [Ruegeria sp. R11]
          Length = 294

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/214 (44%), Positives = 134/214 (62%), Gaps = 12/214 (5%)

Query: 29  SHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           +HM+ +   ND L +A+RYA+ GGK +R FLV E A L  V+   AL    AIECIH YS
Sbjct: 25  AHMEARLGGNDPLHAAMRYAITGGKMLRGFLVLESARLHGVDDDAALEAALAIECIHAYS 84

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDDLP MD+  +RRG+PTVH ++DE  A++AG+ L T+AFE+++ PK      +   L
Sbjct: 85  LVHDDLPCMDDDDLRRGQPTVHKKWDEAMAVLAGDSLQTFAFELLADPKIGPHALV---L 141

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           +  L  + G  GM+ GQMLDI  E     +D  Q+  +Q  KTG L+ ++  +GA+MA A
Sbjct: 142 IRGLAQSSGKDGMVSGQMLDIAAETATTPLDLDQITRLQNRKTGCLISWSATAGAVMAGA 201

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +     LR + + LG+ FQ+ADD+LD E D  K
Sbjct: 202 DEAP---LRRYADALGLAFQIADDILDVEGDAAK 232


>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
          Length = 303

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 127/200 (63%), Gaps = 5/200 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++RY+LL GGK+IR  L        + + +  + + A +E IH YSLIHDDLPSMD+
Sbjct: 39  LAESMRYSLLAGGKRIRPVLAMAAMEALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDD 98

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIG 155
             +RRGKPT H+ Y + TAI+AG+ LLT+AF ++S P     +   IR +++  L+   G
Sbjct: 99  DSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAG 158

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + GM+GGQ +DI  E   ++ + +  + + KTGAL+  +   GA++  AS ++ ERL  +
Sbjct: 159 INGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSSDFERLDRY 218

Query: 214 GENLGIIFQLADDLLDCEED 233
           G+ +GI FQ+ADDLLD E D
Sbjct: 219 GQAVGIAFQIADDLLDVEGD 238


>gi|28199392|ref|NP_779706.1| farnesyl-diphosphate synthase [Xylella fastidiosa Temecula1]
 gi|182682121|ref|YP_001830281.1| polyprenyl synthetase [Xylella fastidiosa M23]
 gi|28057498|gb|AAO29355.1| geranyltranstransferase [Xylella fastidiosa Temecula1]
 gi|182632231|gb|ACB93007.1| Polyprenyl synthetase [Xylella fastidiosa M23]
 gi|307578386|gb|ADN62355.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 291

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 125/221 (56%), Gaps = 10/221 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R D+ L+  L      + TQ   RL +A+RY +L GGK+IR  LV     LF+V+    
Sbjct: 11  QRTDSYLERTL-----SIPTQAPQRLQAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLL 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ G+ L T AFE ++
Sbjct: 66  DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190
                   ++R   + +LTH  G+ GM GGQ LDI      +T   +  +  +K+G LM 
Sbjct: 126 DAPA--DTSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMR 183

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            A   GA+    S  +   L  F   LG+ FQ+ DD+LD E
Sbjct: 184 AAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIE 224


>gi|170730756|ref|YP_001776189.1| geranyltranstransferase [Xylella fastidiosa M12]
 gi|167965549|gb|ACA12559.1| geranyltranstransferase [Xylella fastidiosa M12]
          Length = 291

 Score =  154 bits (390), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 125/221 (56%), Gaps = 10/221 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R D+ L+  L      + TQ   RL +A+RY +L GGK+IR  LV     LF+V+    
Sbjct: 11  QRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLL 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ G+ L T AFE ++
Sbjct: 66  DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190
                   ++R   + +LTH  G+ GM GGQ LDI      +T   +  +  +K+G LM 
Sbjct: 126 DAPADA--SLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMR 183

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            A   GA+    S  +   L  F   LG+ FQ+ DD+LD E
Sbjct: 184 AAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIE 224


>gi|329851866|ref|ZP_08266547.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
           C19]
 gi|328839715|gb|EGF89288.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
           C19]
          Length = 303

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 138/235 (58%), Gaps = 7/235 (2%)

Query: 2   NGGLPSKLQENSKRID--TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
           N  LP  LQ  ++  D  T++ D LL      +     RL  A+RYA LG GK++R F  
Sbjct: 7   NTDLPPLLQRMAETADLVTVVLDQLLPRGDGPEC----RLTEAMRYAALGPGKRLRPFFA 62

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            E A LF+ +    LR   A+ECIH YSL+HDDLP MD+  IRRG+ TVH  YDE TA++
Sbjct: 63  LETARLFDADENAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGRLTVHRAYDEATAVL 122

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ L + AFEI++S  T     +R +L+  L    G QGM GGQM+D+     D   V 
Sbjct: 123 VGDALQSVAFEILASEDTHDDPLVRCELVRMLAQASGAQGMAGGQMIDLIGVHDDLGGVA 182

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +Q++KTGAL+ +A +   ++A   + E   +  F ++LG+ +Q+ADD+LD E D
Sbjct: 183 RMQRLKTGALIVYAFQIPLVVADVGEREGMVMTHFAQDLGLAYQIADDVLDIEGD 237


>gi|77361281|ref|YP_340856.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas haloplanktis TAC125]
 gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas haloplanktis TAC125]
          Length = 295

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 4/202 (1%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ++ + +A  Y+L+ GGK++R FLV     +   +      + AAIECIH YSL+HDDLP+
Sbjct: 29  DETIKAATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVLAAAIECIHSYSLVHDDLPA 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PT HI Y E  AI+AG+ L   AFE+I+          + +++  L H  
Sbjct: 89  MDDDELRRGRPTCHIVYGEAHAILAGDALQALAFELIAKHNFNCSAQAQVKMIAELAHAS 148

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211
           GLQGM+ GQ LDI   D+ I   ++  I K+KTGAL+  A   GA+ + + SQN  E L 
Sbjct: 149 GLQGMVAGQGLDIAATDKVITVAELERIHKLKTGALISCAITLGALCSNNVSQNTLENLA 208

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FG  +G+ FQ+ DD+LD E D
Sbjct: 209 TFGYAIGLAFQVHDDILDVEGD 230


>gi|148552951|ref|YP_001260533.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1]
 gi|148498141|gb|ABQ66395.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1]
          Length = 297

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 143/237 (60%), Gaps = 9/237 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M+  L S+L   ++ ID   D LL            +RL +A+R+A +GG K++R  L  
Sbjct: 1   MSALLASELARIAQEIDARFDTLLTPP-----DDSRERLYAAMRHAAIGGGKRLRPLLAC 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A LF V+   ALR G AIE IH YSLIHDDLP+MD+  +RRG+PTVH  YDE TAI+A
Sbjct: 56  ASARLFAVDPECALRAGLAIEAIHVYSLIHDDLPAMDDDDLRRGRPTVHRAYDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
           G+G    AFEI +S  T     +RS+L+ +L    G  GM+GGQ +D+  E   E     
Sbjct: 116 GDGFQALAFEIAASEATHPDPFVRSELVAALAAAAGPAGMVGGQAMDMAAEAGGEHDLDA 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +Q++KTGAL+ F+ E+GAI+       + +LR +  +LG+ FQ+ADDLLD E D
Sbjct: 176 ISRLQQLKTGALIGFSIEAGAILGRVPPEGRTKLRAYAHDLGLAFQIADDLLDAEGD 232


>gi|114765815|ref|ZP_01444908.1| geranylgeranyl pyrophosphate synthetase [Pelagibaca bermudensis
           HTCC2601]
 gi|114541814|gb|EAU44851.1| geranylgeranyl pyrophosphate synthetase [Roseovarius sp. HTCC2601]
          Length = 289

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/199 (44%), Positives = 124/199 (62%), Gaps = 7/199 (3%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           +L A+RYA  GGK +R +LV E A L +V    AL    AIE IH YSL+HDDLP MD+ 
Sbjct: 29  VLHAMRYATTGGKGLRGWLVLEGARLHDVAPERALWPACAIEAIHAYSLVHDDLPCMDDD 88

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG PTVH ++DE TA++AG+ L    FE+++ P+      +R+ L LSL    G +G
Sbjct: 89  DLRRGLPTVHRKWDEATAVLAGDALQALGFEMVADPRCHPDPLVRADLTLSLARAAGARG 148

Query: 159 MLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LD+     D  +D  Q+  +Q  KTGAL+ ++ E+GA +AHA   +   L  + 
Sbjct: 149 MVLGQALDMAAERADAPLDLQQITALQAGKTGALIAWSAEAGARLAHA---DLAPLTAYA 205

Query: 215 ENLGIIFQLADDLLDCEED 233
           E LG+ FQ+ADD+LD E D
Sbjct: 206 ERLGLAFQIADDILDVEGD 224


>gi|171464023|ref|YP_001798136.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 300

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 18/231 (7%)

Query: 12  NSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
           +S R +  LD LL   QT  H       RL  AIRYA  GG K+IR  LV     L N +
Sbjct: 14  HSIRTEQTLDRLLDSAQTIPH-------RLHEAIRYAAQGGGKRIRPLLVYAAGQLGNKS 66

Query: 69  HLTALR----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +  +        AIECIH YSL+HDDLP MD+ Y+RRG+PTVH  +DE TA++ G+ L 
Sbjct: 67  DVVPVEFLDAAAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDEATALLVGDALQ 126

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           T AFEI+++  T     +R +++ +L    G +GM GGQ +D++   + +D   +  +  
Sbjct: 127 TRAFEILAN--TNGDAQVRLRMISTLAAASGSRGMAGGQAIDLESVGKKLDLQGLKQMHA 184

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MKTGAL+  A E G I AH +  +  +L+ + ++LG+ FQ+ DD+LD   D
Sbjct: 185 MKTGALLSCAVELGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDATAD 235


>gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
          Length = 303

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 9/223 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           ++  LD L ++     Q      L  ++RY+LL GGK+IR  L          + +  + 
Sbjct: 20  VEQFLDSLFVKE----QRTDYGTLAESMRYSLLAGGKRIRPVLAMAAIEALGKDPIPYIP 75

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH YSLIHDDLPSMDN  +RRGKPT H+ Y + TAI+AG+ LLT+AF ++S P
Sbjct: 76  LLAPLELIHTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDP 135

Query: 135 KTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMC 190
                +   IR +++  L+   G+ GM+GGQ +DI  E   ++ + +  + + KTGAL+ 
Sbjct: 136 DYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIR 195

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA++  AS  + E L  +G+ +GI FQ+ADDLLD E D
Sbjct: 196 ASLRIGALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGD 238


>gi|71274508|ref|ZP_00650796.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
 gi|71900337|ref|ZP_00682472.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
 gi|71164240|gb|EAO13954.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
 gi|71729912|gb|EAO32008.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
          Length = 291

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 117/202 (57%), Gaps = 5/202 (2%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           TQ   RL +A+RY +L GGK+IR  LV     LF+V+        AA+E IH YSL+HDD
Sbjct: 25  TQAPQRLHAAMRYTVLSGGKRIRPLLVYAAGHLFHVDEPLLDVPAAAVELIHAYSLVHDD 84

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PTVHI +DE TAI+ G+ L T AFE ++        ++R   + +LT
Sbjct: 85  LPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLADAPADA--SLRIAWLQTLT 142

Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           H  G+ GM GGQ LDI      +T   +  +  +K+G LM  A   GA+    S  +   
Sbjct: 143 HAAGVAGMCGGQALDIDATGQSQTLKALEAMHALKSGTLMRAAVRMGALAGDPSPEDLHS 202

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
           L  F   LG+ FQ+ DD+LD E
Sbjct: 203 LDTFAATLGLAFQVRDDILDIE 224


>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
          Length = 327

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 116/198 (58%), Gaps = 3/198 (1%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYA+L GGK++R  LV    +  N +  TALR   AIE IH YSL+HDD+P MDN
Sbjct: 64  LCDAMRYAVLDGGKRLRPLLVMAACAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDN 123

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH+QY E  A++AG+ L   AFE+++     +    +++L   L    G Q
Sbjct: 124 DVLRRGKPTVHVQYGEAQALLAGDALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQ 183

Query: 158 GMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM GGQ +D+    +  T  Q+  + ++KTGAL+  +   GA    AS      LR +G 
Sbjct: 184 GMAGGQAIDLASVGLPLTSAQLHEMHRLKTGALLQASVMMGAACGAASPTALAALRDYGA 243

Query: 216 NLGIIFQLADDLLDCEED 233
            +G+ FQ+ DD+LD   D
Sbjct: 244 AIGLAFQVVDDILDVTAD 261


>gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittGG]
 gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittGG]
          Length = 296

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 139/240 (57%), Gaps = 19/240 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL+A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLNAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDET 175
            L ++AFEI++        NI ++  L+L   +    G+QGM  GQ LD+  E   I  +
Sbjct: 117 ALQSFAFEILTKTP-----NISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLS 171

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
           ++ +I + KTGAL+  A + G I +    ++K  + L  + E +G+ FQ+ DD+LD E D
Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 315

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 135/219 (61%), Gaps = 7/219 (3%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RVG 76
           IL D  L+      TQ    +  A+R+++  GGK++R  LV E A +   +    +  +G
Sbjct: 33  ILADAALERLLPPGTQRPPSIHQAMRHSVFAGGKRLRPILVMEAARMITGSLPDGVDELG 92

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H YSLIHDDLP++DN  +RRG+PT H+ + E TAI+AG+ L TYA+E+++  +T
Sbjct: 93  AALEMLHTYSLIHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDALQTYAYEVMARLRT 152

Query: 137 QLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFAC 193
             +   R Q++  + H  G + GM+GGQ+LD++ E    D   V  I + KTGAL+  + 
Sbjct: 153 TAE--ARVQIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEYIHRSKTGALITASV 210

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +G + A A + + +R+R FG++ G+ FQ+ DD+LD  +
Sbjct: 211 VAGGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQ 249


>gi|290790316|pdb|3LVS|A Chain A, Crystal Structure Of Farnesyl Diphosphate Synthase From
           Rhodobacter Capsulatus Sb1003
 gi|290790317|pdb|3LVS|B Chain B, Crystal Structure Of Farnesyl Diphosphate Synthase From
           Rhodobacter Capsulatus Sb1003
          Length = 298

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 132/225 (58%), Gaps = 12/225 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           S+R+  I D +    A+ +       L  A+ YA  GGK++R+FL  E A++  ++   A
Sbjct: 5   SERLKEIQDAVETAMAAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAIHGISMAQA 64

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    A+E +H YSL+HDD+P MDN  +RRG PTVH ++D+ TA++AG+ L T AFE+ +
Sbjct: 65  MPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCT 124

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTG 186
            P     +N R  L+ +L    G +GM+ GQ LDI  E       +DE  +  +Q  KTG
Sbjct: 125 DPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDE--IIRLQAGKTG 181

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           AL+ FA ++GAI+A A +     L  +   LG+ FQ+ADD+LD E
Sbjct: 182 ALISFAAQAGAILAGADRGP---LTAYATALGLAFQIADDILDVE 223


>gi|294678977|ref|YP_003579592.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003]
 gi|293372070|gb|ADE44162.1| farnesyl diphosphate synthase [Rhodobacter capsulatus]
 gi|294477797|gb|ADE87185.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003]
          Length = 288

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 132/225 (58%), Gaps = 12/225 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           S+R+  I D +    A+ +       L  A+ YA  GGK++R+FL  E A++  ++   A
Sbjct: 3   SERLKEIQDAVETAMAAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAIHGISMAQA 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    A+E +H YSL+HDD+P MDN  +RRG PTVH ++D+ TA++AG+ L T AFE+ +
Sbjct: 63  MPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCT 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTG 186
            P     +N R  L+ +L    G +GM+ GQ LDI  E       +DE  +  +Q  KTG
Sbjct: 123 DPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDE--IIRLQAGKTG 179

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           AL+ FA ++GAI+A A +     L  +   LG+ FQ+ADD+LD E
Sbjct: 180 ALISFAAQAGAILAGADRGP---LTAYATALGLAFQIADDILDVE 221


>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 294

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 129/232 (55%), Gaps = 8/232 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L+  +  +D  L++ L     +  T H      A+RY++  GGK++R  L    A    
Sbjct: 6   QLKSYALAVDKALNEYLPAAEVYPSTIHE-----AMRYSVFAGGKRLRPILTIAAAEAVG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    + V  A+E IH YSL+HDDLP+MDN   RRG+PT H  Y E  AI+ G+ LLT 
Sbjct: 61  GSMEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQ 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           AFE+I+    ++  +  +Q+ L +    G  G++GGQ++D   +D+ ID   +  I + K
Sbjct: 121 AFEVIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           TGAL   A  +GAI++ AS  E   L  + E +G+ FQ+ DDLLD E D  K
Sbjct: 181 TGALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAK 232


>gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           6P18H1]
 gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           6P18H1]
          Length = 296

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 138/240 (57%), Gaps = 19/240 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDET 175
            L ++AFEI++        NI ++  L+L   +    G+QGM  GQ LD+  E   I  +
Sbjct: 117 ALQSFAFEILTKTP-----NISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLS 171

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
           ++ +I + KTGAL+  A + G I +    ++K  + L  + E +G+ FQ+ DD+LD E D
Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
 gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
          Length = 295

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 137/241 (56%), Gaps = 19/241 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L   + + S +++  L+       +H       R+  A+RY+L+ GGK+IR  LV 
Sbjct: 1   MNPALQEFINDTSLQVNRCLEGW-----THPADAVAPRVTEAMRYSLMNGGKRIRPTLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A   +V +   L    A+ECIH YSLIHDDLP+MDN  +RRGKPT HI +DE TAI+A
Sbjct: 56  AAARAVSVPNEATLAGAGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-- 174
           G+GL T AFE +S+   P T +       ++ +L    G +GM+ GQM+D++ E + +  
Sbjct: 116 GDGLQTLAFEKLSTIEDPATAVA------MIRTLALASGDKGMVAGQMIDMESEGLQQAF 169

Query: 175 --TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + +  I + KTGAL+  A   GA    ASQ + + L  + + +G+ FQ+ DD+LD   
Sbjct: 170 TISHLEKIHRHKTGALIRAAVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVIS 229

Query: 233 D 233
           D
Sbjct: 230 D 230


>gi|312143726|ref|YP_003995172.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 294

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 126/202 (62%), Gaps = 5/202 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
            L  A+RY LL GGK+IR  L      L   ++  AL+ G+A+E IH YSLIHDDLP+MD
Sbjct: 33  ELSEAMRYTLLSGGKRIRPILTLLTTELLKGDYQAALKSGSALEMIHSYSLIHDDLPAMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGK T H+ + E  AI+AG+ LLTYAFEI+S  + +L+   + +++  +  N G+
Sbjct: 93  DDQLRRGKKTNHLVFGEAKAILAGDALLTYAFEILS--ELELEPAKKIKIIKLIASNSGM 150

Query: 157 QGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ LDI  E  + +   M  I   KTGAL+  +  SG   +  S+ EKE L+ + 
Sbjct: 151 LGMVGGQTLDIDAEKKELSLAEMQKIHAAKTGALIKASVLSGVYCSVYSRTEKEALQKYA 210

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
           ENLG++FQ+ DDLLD   D  K
Sbjct: 211 ENLGVLFQVVDDLLDVTGDTEK 232


>gi|70726395|ref|YP_253309.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435]
 gi|68447119|dbj|BAE04703.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435]
          Length = 293

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L  +++Y+L  GGK+IR  LV     + N ++    +   A+E IH YSLIHDDLP+
Sbjct: 27  NTNLEESMQYSLNAGGKRIRPLLVFLTLDVLNQDYKKGKKTALALEMIHTYSLIHDDLPA 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  Y E  AI+AG+ LLT AFEII+  +  L+ +++ +++  L HN 
Sbjct: 87  MDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFEIIADDEL-LESDVKVKILSRLAHNS 145

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ LD+Q  D+ +D   +  I K KTGAL+ FA  S A +A   ++  + L  
Sbjct: 146 GHLGMVGGQTLDMQSEDKPVDLDTLEQIHKAKTGALLQFAVLSAADIAKVDKSTSQALED 205

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           F  ++G++FQ+ DDLLD   D  K
Sbjct: 206 FSNHMGLMFQIKDDLLDVYGDESK 229


>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
 gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
          Length = 302

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 126/216 (58%), Gaps = 9/216 (4%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S +     +++  A+RY+LL GGK++R  L      L   +   AL    A+E IH  SL
Sbjct: 29  SSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGDEALALPTACALEMIHTMSL 88

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLPSMDN   RRGKPT H  Y E  AI+AG+GLL YAFE + +   Q       Q++
Sbjct: 89  IHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQADPQALLQVI 148

Query: 148 LSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
             L   +G  G++GGQ+LD++ E       ET  F I   KTGAL+  +  +GAI+A A+
Sbjct: 149 ARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTF-IHTHKTGALLEASVLTGAILAGAT 207

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
             +++RL  + +N+G+ FQ+ DD+LD    +E+L K
Sbjct: 208 GEQQQRLARYAQNIGLAFQVVDDILDITATQEELGK 243


>gi|282916792|ref|ZP_06324550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139]
 gi|283770598|ref|ZP_06343490.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19]
 gi|282319279|gb|EFB49631.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139]
 gi|283460745|gb|EFC07835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19]
          Length = 293

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/227 (43%), Positives = 136/227 (59%), Gaps = 7/227 (3%)

Query: 13  SKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +K ID + ++L +    S M TQ  + +L ++     GGK+IR  L+       N  +  
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLN---AGGKRIRPVLLLLTLDSLNTEYEL 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+I
Sbjct: 64  GMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELI 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           SS   +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+
Sbjct: 124 SSDD-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALL 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            FA  S A +A+A    KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 183 TFAVMSAADIANADDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|163797801|ref|ZP_02191747.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
 gi|159176923|gb|EDP61489.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
          Length = 295

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 8/232 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L + L E ++ ++ ++D LL Q           RL SA+R+ A  GGK++R FLV + A 
Sbjct: 4   LQAALAECAEDVERMMDLLLPQPEGA-----EARLYSAMRHSAFAGGKRLRPFLVMQSAR 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F V+   A RV AA+E +H YSLIHDDLP+MD+  +RRG+ + H ++DE TAI+AG+ L
Sbjct: 59  QFGVDRRCAARVAAAVEFMHTYSLIHDDLPAMDDADMRRGRTSCHKEFDEATAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
              AFE +  P+T     +R++L+  L    G +GM GGQM+D+  E   +D   +  +Q
Sbjct: 119 QALAFETLVMPETHSDPAVRAELVRDLARASGGRGMCGGQMMDLLAESTEMDIGAITRLQ 178

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++KTG +  F+  SGAI+          L  + +  G+ FQ+ DDLLD   D
Sbjct: 179 RLKTGEMFAFSAVSGAILGKGPYRAYMALHNYAQEFGLAFQIVDDLLDATGD 230


>gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866]
          Length = 296

 Score =  151 bits (382), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 138/240 (57%), Gaps = 19/240 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDET 175
            L ++AFEI++        NI ++  L+L   +    G+QGM  GQ LD+  E   I  +
Sbjct: 117 ALQSFAFEILTKTP-----NISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLS 171

Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           ++ +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909]
 gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1]
 gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909]
 gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1]
          Length = 291

 Score =  151 bits (382), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 139/229 (60%), Gaps = 8/229 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + ++ N K  + ++ DL+   +  + ++  + +L +++   +GGK++R  L+      
Sbjct: 2   LSTYIETNKKPFEKVMFDLI--ESEPIPSELKESMLYSLK---VGGKRLRPILLFAVLES 56

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           FN+       V AA+E IH YSLIHDDLP+MD+  +RRGKPT HI + E TAI+AG+ LL
Sbjct: 57  FNLAPQKGYHVAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHIVFGEATAILAGDSLL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           T+AF++I+  + +L  N R  L+ +L+   G  GM+ GQ+LD++ E   +   Q+  I  
Sbjct: 117 THAFKVIAEDE-RLTTNQRLSLIQALSLASGPMGMVAGQVLDMEAEVKAVSLEQLKQIHV 175

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            KTG L+ FA  +GAI+A A      +L+ F  +LG+ FQ+ DD+LD E
Sbjct: 176 NKTGRLIEFAIVAGAIIAQADDEVINQLKQFAYHLGLAFQIKDDILDVE 224


>gi|15837263|ref|NP_297951.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
           fastidiosa 9a5c]
 gi|9105539|gb|AAF83471.1|AE003910_7 geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
           fastidiosa 9a5c]
          Length = 291

 Score =  151 bits (382), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 125/221 (56%), Gaps = 10/221 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA 72
           +R D+ L+  L      + TQ   RL +A+RY +L  GK+IR  LV     LF+V+    
Sbjct: 11  QRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSRGKRIRPLLVYAAGHLFHVDEPLL 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ G+ L T AFE ++
Sbjct: 66  DVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILTGDALQTLAFECLA 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190
              +    ++R   + +LTH  G+ GM GGQ +DI      +T   +  +  +K+G LM 
Sbjct: 126 DAPSD--TSLRIAWLQTLTHAAGVAGMCGGQAIDIDATGQSQTLKALEAMHALKSGTLMR 183

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            A   GA+    S  +   L  F   LG+ FQ+ DD+LD E
Sbjct: 184 AAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIE 224


>gi|308048592|ref|YP_003912158.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799]
 gi|307630782|gb|ADN75084.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799]
          Length = 294

 Score =  151 bits (382), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 125/203 (61%), Gaps = 5/203 (2%)

Query: 36  NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + RLL A+RY  LLGGK++R FLV    ++          + AA+ECIH YSLIHDDLP+
Sbjct: 27  DPRLLDAMRYGTLLGGKRVRPFLVYATGTMLGAKEDDLDSLAAAVECIHAYSLIHDDLPA 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+ ++RRG+PTVHI +DE TAI+AG+ L   A+E+++ +P     +  R  ++ SL   
Sbjct: 87  MDDDHLRRGQPTVHIAFDEATAILAGDALQGLAYELLAEAPLPAALEGNRIAMLRSLARA 146

Query: 154 IGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERL 210
            G QGM GGQ +D+    + I+   +  + ++KTGAL+  A E G+  +A  +   ++ L
Sbjct: 147 SGYQGMCGGQAIDLASTGKRIELDALQQLHRLKTGALIRSAVEMGSYGVADLATEHRDAL 206

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             + E +G+ FQ+ DD+LD   D
Sbjct: 207 LRYAEAIGLAFQVQDDILDITAD 229


>gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846]
          Length = 296

 Score =  151 bits (382), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 137/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      +   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQSLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LVQILAQGSGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I +    ++K  + L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
           6301]
 gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
 gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
           6301]
 gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
          Length = 301

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 133/229 (58%), Gaps = 11/229 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           L S L+E  ++++  L+ +L         Q    +  ++RY+LL  GK++R  L      
Sbjct: 11  LKSYLKERQRQVEAALNAIL-------PPQDPPLIYESMRYSLLAEGKRLRPILCLASCE 63

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       AL    A+E +H  SLIHDDLPSMDN   RRG+PT H  Y E  AI+AG+ L
Sbjct: 64  LAGGTAAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDAL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMI 180
           LTYAFE I+    ++  +   +++ +L   +G +G++GGQ++D+Q E  D+     +  I
Sbjct: 124 LTYAFEAIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYI 183

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+  +  SGAI+A AS+  +E+LR + + +G+ FQ+ DD+LD
Sbjct: 184 HTHKTGALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILD 232


>gi|260425613|ref|ZP_05779593.1| geranyltranstransferase [Citreicella sp. SE45]
 gi|260423553|gb|EEX16803.1| geranyltranstransferase [Citreicella sp. SE45]
          Length = 289

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/196 (43%), Positives = 119/196 (60%), Gaps = 7/196 (3%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+RYA +GGK +R +LV E A L  V    AL    AIE IH YSL+HDDLP MD+  +R
Sbjct: 32  AMRYATVGGKGLRGWLVLEGARLHGVPQAQALWPACAIEAIHAYSLVHDDLPCMDDDDLR 91

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG PTVH ++DE TA++AG+ L    FE+++ P+      +R+ L LSL    G +GM+ 
Sbjct: 92  RGLPTVHRKWDEATAVLAGDALQALGFELVADPRCHPDAGVRADLTLSLARAAGARGMVL 151

Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ LD+  E  D      ++  +Q  KTGAL+ ++ E+GA +A A       L  + + L
Sbjct: 152 GQALDMAAETADTPLTLDEITALQAGKTGALITWSAEAGARLAQADPGP---LTSYADRL 208

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ADD+LD E D
Sbjct: 209 GLAFQIADDILDVEGD 224


>gi|116492587|ref|YP_804322.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745]
 gi|116102737|gb|ABJ67880.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745]
          Length = 296

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 134/236 (56%), Gaps = 11/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN      +++N + +D  +D+L         +  N  L   ++Y++  GGK++R  ++ 
Sbjct: 1   MNSNFDDFVKQNVELLDQHIDELF-----DSDSTLNTDLKMMMKYSIDAGGKRVRPLVLL 55

Query: 60  ECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                F    +   L V AA+E +H YSLIHDDLP+MDN  +RRG+PT H ++ E  AI+
Sbjct: 56  AILKAFGKTPNYDILTVAAALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKKFGEAEAIL 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           AG+ LLT AF+ ISS  T LKD I+S+L+LSL  + G  GM+ GQ+LDIQ         +
Sbjct: 116 AGDALLTVAFQWISS--TNLKDRIKSELVLSLASDAGASGMIAGQLLDIQGNQRHYSLAE 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +  +KTG ++ F  E+  IM  +     E ++ F  N G+ FQ+ DD++D  E
Sbjct: 174 LKHLHHLKTGKMLLFPAEAALIMKPSKLQVAELVKDFMANFGLAFQIHDDIIDVTE 229


>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
           WA1]
 gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
           WA1]
          Length = 296

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 143/230 (62%), Gaps = 14/230 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L+E +K ID + D       S ++ +++   +  ++Y L  GGK++R  L      LFN
Sbjct: 10  RLEEINKTIDNVFD------KSDIELENS--FIEMLKYPLDAGGKRLRPILTCLACELFN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  ++    A+E IH YSL+HDDLP+MDN  +RRGKPT H++Y E  AI+ G+GLLT+
Sbjct: 62  GDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTH 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           AF+++S  KT +KD+   +L+  L++  G+ GM+ GQ +D+  +++ I+   + ++   K
Sbjct: 122 AFQLLS--KTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKK 179

Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGA++  A   GAI + + + N+ E +  +GE +G+ FQ+ DD+LD   D
Sbjct: 180 TGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISD 229


>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
           WK1]
 gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
           WK1]
          Length = 290

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 122/198 (61%), Gaps = 4/198 (2%)

Query: 42  AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+L  GGK+IR  L+      F       + V  A+E IH YSLIHDDLPSMDN  +
Sbjct: 32  AMLYSLQAGGKRIRPLLLLSTLHAFRKPIDIGMSVACALEMIHTYSLIHDDLPSMDNDDL 91

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  + E  AI+AG+ LLTYAF++++  KT +  +++ +L+  L    G +GM+
Sbjct: 92  RRGKPTNHKVFGEANAILAGDALLTYAFQVVADDKT-ISSDVKVRLISELAKAAGPEGMV 150

Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ+ D++ E   I   Q+  I + KTG L+ ++  +GAI+  A++ +   L  F ++LG
Sbjct: 151 GGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSIRAGAILGEATEQQLTLLTLFADHLG 210

Query: 219 IIFQLADDLLDCEEDLPK 236
           + FQ+ DD+LD E D  K
Sbjct: 211 LAFQIRDDILDIEGDEQK 228


>gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
          Length = 303

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 16/238 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
            P  LQ   + ++ +LDDLL   A  +      RL  A+RYA+LGG K++R+ LV     
Sbjct: 8   FPEWLQGRVRHVEDVLDDLL-PPADAVPA----RLHEAMRYAVLGGGKRVRAALVYAAGQ 62

Query: 64  LFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
              V+        +  R  AA+E IH YSL+HDDLP MD+  +RRG+PT H+Q+DE TA+
Sbjct: 63  ACPVSGSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAM 122

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           +AG+ L   AFE+++S    +   +  Q   SL    G QGM GGQ +D+      +   
Sbjct: 123 LAGDALQPLAFELLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRD 180

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + ++  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D
Sbjct: 181 DLQLMHSMKTGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTAD 238


>gi|302383899|ref|YP_003819722.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194527|gb|ADL02099.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 301

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/197 (43%), Positives = 122/197 (61%), Gaps = 1/197 (0%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA LG GK++R +   E + LF++     LR   A+EC+H YSL+HDDLP MD
Sbjct: 40  RLTEAMRYAALGPGKRLRPYFAMEASRLFDIEERPVLRAACALECVHAYSLVHDDLPCMD 99

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT+H  YDE TA++AG+ L T AF+I+    T    NIR  L   L+   G 
Sbjct: 100 DDDMRRGRPTLHRAYDEATAVLAGDALQTAAFDILLHEDTHEDANIRCALAARLSLASGA 159

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +GM GGQM+D+     D   V  +Q++KTGAL  +A E   I+A A++   + L  F  +
Sbjct: 160 RGMAGGQMVDLLGVRDDLEGVARMQRLKTGALFTYAFEIPLIVARANERHCQALTDFAHD 219

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ +Q+ DDLLD + D
Sbjct: 220 IGLAYQIVDDLLDFDGD 236


>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
          Length = 292

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 128/218 (58%), Gaps = 7/218 (3%)

Query: 22  DLLLQTASHMQTQH---NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77
           DL+ Q  + + T++   N  L  A+ Y+L+ GGK++R  L+   A    V+    LR+  
Sbjct: 11  DLINQQLNEIYTENMALNKDLAKAMNYSLMAGGKRLRPILIMAAADALGVDGEKFLRLST 70

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           +IE IH YSLIHDDLP+MDN   RRGK T H  + E  AI+AG+ LLT AFEII++ K  
Sbjct: 71  SIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAFEIIATDK-N 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACES 195
           +    + +++  ++   G +GM+GGQ++D+Q E   ID   +  +   KTGAL C A  S
Sbjct: 130 VDAETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTGALFCAAIRS 189

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAI+A A + +   L  +    G+ FQ+ DD+LD   D
Sbjct: 190 GAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGD 227


>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 295

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 128/222 (57%), Gaps = 4/222 (1%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77
           IL D  L     ++   N  ++ A+RY++  GGK++R  +     +LF  N    L    
Sbjct: 12  ILTDKKLHHYLDVKEDKNKTVIDAMRYSIFAGGKRLRPIVAIATYNLFKDNLEEVLPYAC 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKT 136
           A+E IH YSLIHDDLP+MD+   RRGK T H  Y E  AI+AG+ LL YAFEI IS  +T
Sbjct: 72  ALEMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALLNYAFEIMISHART 131

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           Q   N+  Q +  +    G+ GM+GGQ++D++ E   +D+  +  I   KT AL+  A +
Sbjct: 132 QSNANVHLQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIHYNKTAALIISAFK 191

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            GAI+A A++ +   +   G+N+G+ FQ+ DD+LD   D  K
Sbjct: 192 VGAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKK 233


>gi|194366666|ref|YP_002029276.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 292

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 123/220 (55%), Gaps = 10/220 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTAL 73
           RI++ LD  L   A   Q     RL  A+RY++LGG K++R  LV     LF     +  
Sbjct: 13  RIESQLDAALPSPAEAPQ-----RLHQAMRYSVLGGGKRMRPLLVYASGQLFGAQPESLD 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+AG+ L T AF +++ 
Sbjct: 68  AAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGLLAD 127

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCF 191
               L   +R   + +L H  G  GM GGQ LDI      +T   +  +  +KTGAL+  
Sbjct: 128 --APLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRA 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   GA+   A + +  +L  F + LG+ FQ+ DD+LD E
Sbjct: 186 AVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVE 225


>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 309

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 126/204 (61%), Gaps = 7/204 (3%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D ++SA++Y+L  GGK++R  L+ E  ++F  +   A+    AIE IH YSLIHDDLP+M
Sbjct: 41  DIIVSAMKYSLFAGGKRVRPILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPAM 100

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---H 152
           DN  +RRG+PT H  Y E  AI+AG+ LL  A E        ++   R++ + +L+    
Sbjct: 101 DNDDLRRGEPTNHKVYGENIAILAGDALLNAAVETAVEGIETMEPAERARGIAALSLLMR 160

Query: 153 NIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             G+ GM+GGQ  D+    D+ I+E ++  I   KTGAL+  A   GA++A AS++E++ 
Sbjct: 161 AAGVNGMIGGQTGDLLAEDDDAINEDKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQA 220

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           LR +G  +G+ FQ+ DD+LD E +
Sbjct: 221 LRNYGSAIGMAFQVVDDILDVESE 244


>gi|157376460|ref|YP_001475060.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3]
 gi|157318834|gb|ABV37932.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3]
          Length = 293

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 3/201 (1%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   + +L +A+++ AL+GGK+IR FLV     + NV         AAIEC+H YSLIHD
Sbjct: 24  QATTDLKLQAAMKHGALIGGKRIRPFLVYAIGDMLNVAPEKLDACAAAIECVHAYSLIHD 83

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MD+  +RRG+PTVHI +DE TAI+AG+ L   AFE I  P   +  +    ++ +L
Sbjct: 84  DLPAMDDDALRRGQPTVHIAFDEATAILAGDALQALAFESICEPINGITPSQNLAMVRAL 143

Query: 151 THNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G  GM GGQ +D+   D+ ID   +  + ++KTGAL+  A E   I A  +  E+ 
Sbjct: 144 AKASGYSGMCGGQAMDLNATDKQIDLATLTKLHRLKTGALIRCAVELPMIAAAVTVEEQN 203

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  F + +G+ FQ+ DD+LD
Sbjct: 204 LLMDFADAIGLAFQVQDDVLD 224


>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
 gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
          Length = 293

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/185 (43%), Positives = 116/185 (62%), Gaps = 4/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V     L+  N    L VGA IE IH YSLIHDDLPSMDN   RRGKPT H
Sbjct: 44  GGKRIRPLFVLAVLELYRKNLQDGLIVGAVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y E  A +AG+ L T AF I++  +  +    R +L+  L+   G +GM+GGQ+LD++
Sbjct: 104 KVYGEALATLAGDALNTLAFGILA--RMDVTAEKRIELVQLLSVAAGAEGMVGGQVLDME 161

Query: 169 DE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E   +D T++  +   KTGAL+ F+ E+GA++A AS+ ++  L+ +  ++G+ FQ+ DD
Sbjct: 162 GEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDD 221

Query: 227 LLDCE 231
           +LD E
Sbjct: 222 ILDIE 226


>gi|56416957|ref|YP_154031.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma
           marginale str. St. Maries]
 gi|222475323|ref|YP_002563740.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Florida]
 gi|56388189|gb|AAV86776.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma
           marginale str. St. Maries]
 gi|222419461|gb|ACM49484.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Florida]
          Length = 291

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 4/229 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
           S +Q+  +   +++   L Q         +  L  A+ Y +   GK IRSFL +  A +F
Sbjct: 11  SDIQQKVEDFASLVQKELAQVVHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVF 70

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V+    LR+ AAIE +H YSL+HDDLPSMDN  IRRGK + HI++ E  A++ GN LLT
Sbjct: 71  GVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLT 130

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMK 184
             FE++S+        +R +++  L+   G  GM+ GQMLD++       + V  I ++K
Sbjct: 131 LTFELLSTMNEGCA--VRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELK 188

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   ACE+GA++  AS  E+  L  +G  LG  FQ  DDL D  ED
Sbjct: 189 TARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 237


>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
 gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
          Length = 303

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 16/234 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L+E ++ ++ +LD+LL   A    T    RL  A+RYA+LGG K++R+ LV        V
Sbjct: 12  LRERAQHVEHVLDELL-PGADIAPT----RLHEAMRYAVLGGGKRVRAVLVYAAGQACPV 66

Query: 68  NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           N  T        R  AA+E IH YSL+HDDLP MD+  +RRG+PTVH+Q+DE TA++AG+
Sbjct: 67  NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
            L   AFE+++     +   +  Q    L    G QGM GGQ +D+      +   ++  
Sbjct: 127 ALQPLAFELLAG--MPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQT 184

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D
Sbjct: 185 MHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTAD 238


>gi|254995136|ref|ZP_05277326.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Mississippi]
 gi|255003306|ref|ZP_05278270.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Puerto Rico]
 gi|255004432|ref|ZP_05279233.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Virginia]
          Length = 286

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 4/229 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
           S +Q+  +   +++   L Q         +  L  A+ Y +   GK IRSFL +  A +F
Sbjct: 6   SDIQQKVEDFASLVQKELAQVVHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVF 65

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V+    LR+ AAIE +H YSL+HDDLPSMDN  IRRGK + HI++ E  A++ GN LLT
Sbjct: 66  GVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLT 125

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMK 184
             FE++S+        +R +++  L+   G  GM+ GQMLD++       + V  I ++K
Sbjct: 126 LTFELLSTMNEGCA--VRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELK 183

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   ACE+GA++  AS  E+  L  +G  LG  FQ  DDL D  ED
Sbjct: 184 TARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 232


>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
 gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
          Length = 293

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 117/185 (63%), Gaps = 4/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V     L+  N    L VG+ IE IH YSLIHDDLPSMDN   RRGKPT H
Sbjct: 44  GGKRIRPLFVLAVLELYQKNLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y E  A +AG+ L T AF I++  + ++    R +L+  L+   G +GM+GGQ+LD++
Sbjct: 104 KVYGEALATLAGDALNTLAFGILA--RMEVTAEKRIELVQLLSVAAGAEGMVGGQVLDME 161

Query: 169 DE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E   +D T++  +   KTGAL+ F+ E+GA++A AS+ ++  L+ +  ++G+ FQ+ DD
Sbjct: 162 GEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDD 221

Query: 227 LLDCE 231
           +LD E
Sbjct: 222 ILDIE 226


>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 292

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 9/224 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
             E    ++  LD L+        T    R+  A+RY+L+ GGK++R  LV      F  
Sbjct: 6   FAEKVPEVNRWLDRLMPPA-----TTFPPRIHEAMRYSLMAGGKRLRPILVLAAGEAFGG 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  V  A E +H YSLIHDDLP+MDN  +RRG PT H Q+DE TAI+AG+GL+T+A
Sbjct: 61  APERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F I++      +  +R    L++     ++GM+ GQ++D++ E   ID  ++  I + KT
Sbjct: 121 FRILAEMDAPAEQKVRVIRELAVGSGT-VEGMIAGQIVDLEAERKPIDAERLKFIHRAKT 179

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GAL+  A   G I+A A++++   L  +G+ +G+ FQ+ADD+LD
Sbjct: 180 GALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILD 223


>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 294

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 132/224 (58%), Gaps = 9/224 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           LQ  S+ I+  LD L+    S     H + L+ A RYALL GGK++R  L        + 
Sbjct: 8   LQTQSQLIEKRLDQLV----SKRHGPHQN-LIEAARYALLSGGKRLRPILALTTVQTLHG 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   AL     +E IH YSLIHDDLP MDN   RRGK TVH QY E  A++ G+ LLTYA
Sbjct: 63  DIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLTYA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FE++++ K  L    + +L+  L+   G  GM+GGQ LD+  E   I+   + ++ + KT
Sbjct: 123 FELLATDK-YLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLHRNKT 181

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AL+  + E G I+A+A++ +   +R FGEN+G+ FQ+ DD+LD
Sbjct: 182 AALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILD 225


>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
 gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
 gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
          Length = 303

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 16/234 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L+E ++ ++ +LD+LL   A    T    RL  A+RYA+LGG K++R+ LV        V
Sbjct: 12  LRERAQHVEHVLDELL-PGADIAPT----RLHEAMRYAVLGGGKRVRAALVYAAGQACPV 66

Query: 68  NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           N  T        R  AA+E IH YSL+HDDLP MD+  +RRG+PTVH+Q+DE TA++AG+
Sbjct: 67  NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
            L   AFE+++     +   +  Q    L    G QGM GGQ +D+      +   ++  
Sbjct: 127 ALQPLAFELLAG--MPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQT 184

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D
Sbjct: 185 MHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTAD 238


>gi|127513698|ref|YP_001094895.1| polyprenyl synthetase [Shewanella loihica PV-4]
 gi|126638993|gb|ABO24636.1| farnesyl-diphosphate synthase [Shewanella loihica PV-4]
          Length = 293

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/186 (43%), Positives = 112/186 (60%), Gaps = 2/186 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           AL+GGK+IR FLV     +  V         AAIECIH YSLIHDDLP+MD+  +RRG+P
Sbjct: 39  ALIGGKRIRPFLVYAVGEMLGVPLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQP 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVHI ++E TAI+AG+ L T AFEIIS    +L  + +  ++ +L    G  GM GGQ +
Sbjct: 99  TVHIAFNEATAILAGDALQTLAFEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAM 158

Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D+   D  ID   +  + ++KTGAL+  A E   I A  +  +   L  F + +G+ FQ+
Sbjct: 159 DLNATDRQIDLETLKRLHRLKTGALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQV 218

Query: 224 ADDLLD 229
            DD+LD
Sbjct: 219 QDDVLD 224


>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
 gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
          Length = 294

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 8/232 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L++ S+++D  LD  +  + ++    H      A+RY++  GGK++R  LV        
Sbjct: 6   ELKQWSQKVDEALDRYIPSSDAYPSVIHE-----AMRYSIFAGGKRLRPILVLAATQAVG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    + V  A+E IH YSL+HDDLP+MDN   RRG+PT H  Y E  AI+ G+ L T 
Sbjct: 61  GNTEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTL 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           AFE+I+      + +  +Q+ L +    G  G++GGQ++DI  ++  ID   +  I + K
Sbjct: 121 AFELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           TGAL   +  +GAI+  A+ N+   L  + E +G+ FQ+ DDLLD E D  K
Sbjct: 181 TGALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAK 232


>gi|163737897|ref|ZP_02145313.1| branched-chain amino acid aminotransferase [Phaeobacter
           gallaeciensis BS107]
 gi|163743327|ref|ZP_02150707.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis
           2.10]
 gi|161383321|gb|EDQ07710.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis
           2.10]
 gi|161388513|gb|EDQ12866.1| branched-chain amino acid aminotransferase [Phaeobacter
           gallaeciensis BS107]
          Length = 299

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/223 (42%), Positives = 133/223 (59%), Gaps = 12/223 (5%)

Query: 20  LDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           L D   +  +HM  +   +D L +A+RYA+ GGK +R FLV E A L  V    AL    
Sbjct: 21  LKDAQTRITTHMDARLGGDDALHAAMRYAVTGGKMLRGFLVLESARLHGVAEAAALEAAL 80

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIECIH YSL+HDDLP MD+  +RRG+PTVH ++DE  A++AG+ L T+AFE+++ P+  
Sbjct: 81  AIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQTFAFELLADPRIG 140

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFAC 193
                   L+  L    G  GM+ GQMLDI  E     +D  Q+  +Q  KTG L+ ++ 
Sbjct: 141 PH---ALTLIRGLAQASGKDGMVSGQMLDIAAETATRPLDLEQITHLQNRKTGCLISWSA 197

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +GA+MA A +     LR + + LG+ FQ+ADD+LD E D  K
Sbjct: 198 TAGAVMAGADEAP---LRRYADALGLAFQIADDILDVEGDAAK 237


>gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
           StLB046]
          Length = 294

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 119/185 (64%), Gaps = 3/185 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V     ++N +  T+  VG+A+E IH YSLIHDDLPSMD+  +RRGKPT H
Sbjct: 44  GGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHDDLPSMDDDELRRGKPTNH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + Y E  A +AG+ L T AF +I+     L    R +L+  L+   G +GM+GGQ+LD+ 
Sbjct: 104 VVYGEALATLAGDALNTLAFGVIARL-NNLSAEKRIELVNLLSVAAGTEGMVGGQVLDMD 162

Query: 169 DE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E   ++  ++  +   KTGAL+ F+ E+GA++A+AS +++E L  +  ++G+ FQ+ DD
Sbjct: 163 GEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDREALVEYAHHIGLAFQIQDD 222

Query: 227 LLDCE 231
           +LD E
Sbjct: 223 ILDIE 227


>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter sp. Re1]
 gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter sp. Re1]
          Length = 296

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 9/201 (4%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+ Y+ L GGK++R  +V + A LF +++   +     IE IH YSLIHDDLP MD
Sbjct: 32  KLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPVMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT H  Y +  A++AG+ LLT+AF  I+  K      I    ++ +   + L
Sbjct: 92  NDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIA--KNSKISGINPDAVVDVIEKVSL 149

Query: 157 Q----GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                GM+GGQ +DI    + +    +F I   KTG LM  +  SGA +A AS+ + E +
Sbjct: 150 AAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFWSGARLAGASKEDLETI 209

Query: 211 RCFGENLGIIFQLADDLLDCE 231
           +CFGE LG+IFQ+ DD+LD +
Sbjct: 210 KCFGEKLGLIFQIVDDILDIK 230


>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
 gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
          Length = 303

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 130/234 (55%), Gaps = 16/234 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L+E ++ ++ +LD+LL             RL  A+RYA+LGG K++R+ LV        V
Sbjct: 12  LRERAQHVEHVLDELLPGA-----DIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPV 66

Query: 68  NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           N  T        R  AA+E IH YSL+HDDLP MD+  +RRG+PTVH+Q+DE TA++AG+
Sbjct: 67  NGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGD 126

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
            L   AFE+++     +   +  Q    L    G QGM GGQ +D+      +   ++  
Sbjct: 127 ALQPLAFELLAG--MPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQT 184

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D
Sbjct: 185 MHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTAD 238


>gi|20429115|emb|CAD24425.1| geranyl-diphosphate synthase [Paracoccus zeaxanthinifaciens]
          Length = 287

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 127/197 (64%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L  A+RYA+ GGK++R+FLV E A L  ++   +L V AA+E +H YSL+HDDLP+MD+ 
Sbjct: 28  LSDAMRYAVQGGKRLRAFLVMESARLHGLDDDASLPVAAAVEALHAYSLVHDDLPAMDDD 87

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG+PTVH+++ E TAI+AG+ L T AF++++ P+    D  R +L+ SL    G  G
Sbjct: 88  DLRRGQPTVHVKWTEATAILAGDALQTLAFQLLADPRVG-DDAARMRLVGSLAQASGAAG 146

Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LDI  E     +D   +  +Q  KTGAL+ FA  +G +MA A   +   L  + 
Sbjct: 147 MVWGQALDIAAETSGVPLDLDAIIRLQGGKTGALIRFAATAGPLMAGA---DPAALDDYA 203

Query: 215 ENLGIIFQLADDLLDCE 231
           + +G+ FQ+ADD+LD E
Sbjct: 204 QAVGLAFQIADDILDVE 220


>gi|146278824|ref|YP_001168983.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145557065|gb|ABP71678.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025]
          Length = 289

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 126/202 (62%), Gaps = 8/202 (3%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           ++ A+RYA+ GGK++R FLV E A L  +    A+   A+IE +H YSL+HDD+P MD+ 
Sbjct: 30  VVHAMRYAVQGGKRLRGFLVLESARLHGIVPEAAVSAAASIEALHAYSLVHDDMPCMDDD 89

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG PTVH ++DE TA++AG+ L T AFE+++ P       +R +L+ +L    G +G
Sbjct: 90  DLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAEVRIRLVETLAKASGAEG 148

Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LDI  E     +   Q+  +Q  KTGAL+C++ E+GAI+  A       LR + 
Sbjct: 149 MVLGQALDIAAETAAVPLTLEQITHLQAGKTGALICWSAEAGAILGQADTGP---LRRYA 205

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
             LG+ FQ+ADD+LD E D  K
Sbjct: 206 TALGLAFQIADDILDVEGDADK 227


>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
 gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
 gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
 gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
          Length = 307

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/231 (42%), Positives = 131/231 (56%), Gaps = 16/231 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRY-ALLGGKKIRSFLVTECASLF 65
           KL    +R+D  L+  L QT        +D  LS A+RY ALLGGK++R FLV     +F
Sbjct: 14  KLHSAHQRVDEALNQAL-QT-----LPFSDMPLSQAMRYGALLGGKRLRPFLVYAVGEMF 67

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           NV         AAIECIH YSLIHDDLP+MDN  +RRGKPT HI++ E  AI+AG+ L T
Sbjct: 68  NVPVANLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAGDALQT 127

Query: 126 YAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180
            AFEI++    P   + D  R  ++  L    GL GM GGQ LD+  +D+ ID   +  I
Sbjct: 128 LAFEILAKNAMPDVAIAD--RVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVALEKI 185

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDC 230
              KTGAL+  A   GA+ A     +    L  +  ++G+ FQ+ DD+LD 
Sbjct: 186 HLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDV 236


>gi|159045835|ref|YP_001534629.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12]
 gi|157913595|gb|ABV95028.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12]
          Length = 291

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 133/237 (56%), Gaps = 14/237 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           G  +   + + RI   LDDL+         Q    +   + YA  GGK++R  LV E A 
Sbjct: 3   GFAAAQADGATRIAACLDDLI-------GAQPESVIRDGMAYATRGGKRLRGVLVLETAW 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  V    A+   AAIEC+H YSL+HDDLP+MD+  +RRG+PTVH+++DE +AI+ G+ L
Sbjct: 56  LHGVAPERAVYAAAAIECLHAYSLVHDDLPAMDDDDLRRGQPTVHVKWDEASAILVGDAL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFM 179
            T AFE +S P+      +   L+ SL    G  GM+ GQ LDI  E         ++  
Sbjct: 116 QTLAFEALSDPRMTDDPAVALALVRSLAQASGAAGMVLGQALDIAAETAAAPLSLDEITR 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +Q  KTGAL+ ++ E+GA++A A   +   LR + E +G+ FQ+ADD+LD   D  K
Sbjct: 176 LQAGKTGALIRWSAEAGALLARA---DPAPLRRYAEAIGLAFQIADDILDVTGDAEK 229


>gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 293

 Score =  148 bits (374), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/190 (43%), Positives = 115/190 (60%), Gaps = 3/190 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV        V+ ++ ++V  A+E IH YSLIHDDLP+MDN   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALQVDPMSGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y + TAI+AG+ LLT AF I++  +  L    R  L+  ++ + G +GM+GGQ  D++
Sbjct: 103 KVYGDATAILAGDALLTLAFSILAEDE-NLSFETRIGLINQISFSSGAEGMVGGQQADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A AS  + +RLR F EN+G+ FQ++DD
Sbjct: 162 AENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDD 221

Query: 227 LLDCEEDLPK 236
           +LD   D  K
Sbjct: 222 ILDVIGDETK 231


>gi|254994133|ref|ZP_05276323.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
           J2-064]
          Length = 233

 Score =  148 bits (374), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 126/215 (58%), Gaps = 6/215 (2%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           ++D+ L +  S    +   RL  ++ Y++  GGK+IR  LV        VN L  ++   
Sbjct: 14  VIDESLFKEISERNIEP--RLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I++  +  
Sbjct: 72  ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-N 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195
           L    R  L+  ++ + G +GM+GGQ+ D++ E    T  ++  I   KTG L+ FA  S
Sbjct: 131 LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTS 190

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A +A A   + +RLR F EN+GI FQ++DD+LD 
Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDV 225


>gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
 gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
           Clip81459]
 gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
 gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
 gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
 gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 1816]
 gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 220]
 gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
          Length = 293

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 126/215 (58%), Gaps = 6/215 (2%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           ++D+ L +  S    +   RL  ++ Y++  GGK+IR  LV        VN L  ++   
Sbjct: 14  VIDESLFKEISERNIEP--RLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I++  +  
Sbjct: 72  ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-N 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195
           L    R  L+  ++ + G +GM+GGQ+ D++ E    T  ++  I   KTG L+ FA  S
Sbjct: 131 LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTS 190

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A +A A   + +RLR F EN+GI FQ++DD+LD 
Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDV 225


>gi|190575335|ref|YP_001973180.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
           K279a]
 gi|190013257|emb|CAQ46891.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
           K279a]
          Length = 292

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 123/220 (55%), Gaps = 10/220 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTAL 73
           RI++ LD  L   A   Q     RL  A+RY++LGG K++R  LV     LF     +  
Sbjct: 13  RIESQLDAALPSPAEAPQ-----RLHQAMRYSVLGGGKRMRPLLVYASGHLFGTQPESLD 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               ++E IH YSL+HDDLP+MD+  +RRGKPT H+ +DE TAI+AG+ L T AF +++ 
Sbjct: 68  AAAMSVELIHAYSLVHDDLPAMDDDALRRGKPTTHVAFDEATAILAGDALQTRAFGLLAD 127

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCF 191
               L   +R   + +L H  G  GM GGQ LDI      +T   +  +  +KTGAL+  
Sbjct: 128 --APLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRA 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   GA+   A + +  +L  F + LG+ FQ+ DD+LD E
Sbjct: 186 AVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVE 225


>gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
 gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
 gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
 gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
          Length = 293

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 126/215 (58%), Gaps = 6/215 (2%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           ++D+ L +  S    +   RL  ++ Y++  GGK+IR  LV        VN L  ++   
Sbjct: 14  VIDESLFKEISERNIEP--RLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I++  +  
Sbjct: 72  ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-N 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195
           L    R  L+  ++ + G +GM+GGQ+ D++ E    T  ++  I   KTG L+ FA  S
Sbjct: 131 LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTIEELSSIHARKTGELLIFAVTS 190

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A +A A   + +RLR F EN+GI FQ++DD+LD 
Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDV 225


>gi|103487675|ref|YP_617236.1| polyprenyl synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977752|gb|ABF53903.1| farnesyl-diphosphate synthase [Sphingopyxis alaskensis RB2256]
          Length = 306

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 133/226 (58%), Gaps = 8/226 (3%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           E ++ ID + D LL   A          L  A+RYA + GGK++R  LV     LF+V+ 
Sbjct: 21  EVAEGIDALFDQLLAVPADP-----RGPLYEAMRYAAIAGGKRLRPLLVRAAGDLFHVDR 75

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              LRVGAA+E +H YSLIHDDLP MD+  +RRGKPT H  + E TA++AG+ L   AFE
Sbjct: 76  ALTLRVGAAVEAMHVYSLIHDDLPCMDDDDMRRGKPTTHKAFGEATAVLAGDSLHALAFE 135

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
            +  P T     +R++L   L    G  GM GGQM+D+  E    D   V  +Q++KTGA
Sbjct: 136 WLCDPATSADPFVRAELCCELARAAGPAGMAGGQMMDLAAETSDFDLPTVTRLQQLKTGA 195

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+ F+ E+GAI+A      +  LR +  ++G+ FQ+ADD++D E D
Sbjct: 196 LIAFSVEAGAILARIPAEGRRPLRGYARDIGLAFQIADDIMDVEGD 241


>gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
 gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
          Length = 293

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y++  GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MD
Sbjct: 31  RLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGK T H  + + TAI+AG+ LLT AF I++  +  L    R  L+  ++ + G 
Sbjct: 91  NDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGA 149

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+GGQ+ D++ E    T  ++  I   KTG L+ FA  S A +A A   + +RLR F 
Sbjct: 150 EGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFA 209

Query: 215 ENLGIIFQLADDLLDC 230
           EN+GI FQ++DD+LD 
Sbjct: 210 ENIGIGFQISDDILDV 225


>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 290

 Score =  147 bits (372), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 133/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKKIYEAMIYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
              + +   ++T   G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GA
Sbjct: 130 GEEALKACYTITKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
 gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
          Length = 290

 Score =  147 bits (372), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GA
Sbjct: 130 GEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
 gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
          Length = 293

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 127/221 (57%), Gaps = 6/221 (2%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           ++DD LL   +    +   +L  ++ Y++  GGK+IR  LV       N + +  ++   
Sbjct: 14  VMDDSLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNTDPMRGVKTAT 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MDN   RRGK T H  Y + TAI+AG+ LLT AF +++     
Sbjct: 72  ALEMIHTYSLIHDDLPAMDNDDYRRGKRTNHKVYGDATAILAGDALLTLAFSVLAE-DAN 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACES 195
           L    R  L+  L+ + G +GM+GGQ  D++ E   I   ++  I   KTG L+ FA  S
Sbjct: 131 LTFETRLALINELSFSSGAEGMVGGQQADMEAENKKITLEELATIHARKTGELLIFAVTS 190

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A +A A+  + +RLR F EN+G+ FQ++DD+LD   D  K
Sbjct: 191 AAKIAEATPEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231


>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
 gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
          Length = 303

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 133/238 (55%), Gaps = 16/238 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
            P  LQ   + ++ +LDDLL   A  + +    RL  A+RYA+LGG K++R+ LV     
Sbjct: 8   FPEWLQGRVQHVEDVLDDLL-PPADALPS----RLHEAMRYAVLGGGKRVRAALVYAAGQ 62

Query: 64  LFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
              V+        +  R  AA+E IH YSL+HDDLP MD+  +RRG+PT H+++DE TA+
Sbjct: 63  ACPVSGSVLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATAM 122

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           +AG+ L   AF++++S    +   +  Q   SL    G QGM GGQ +D+      +   
Sbjct: 123 LAGDALQPLAFDLLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSRD 180

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++  +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D
Sbjct: 181 ELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTAD 238


>gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067]
          Length = 293

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/190 (43%), Positives = 114/190 (60%), Gaps = 3/190 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV        V+ +  ++V  A+E IH YSLIHDDLP+MDN   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALQVDPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y + TAI+AG+ LLT AF I++  +  L    R  L+  ++ + G +GM+GGQ  D++
Sbjct: 103 KVYGDATAILAGDALLTLAFSILAEDE-NLSFETRIGLINQISFSSGAEGMVGGQQADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A AS  + +RLR F EN+GI FQ++DD
Sbjct: 162 AENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGIGFQISDD 221

Query: 227 LLDCEEDLPK 236
           +LD   D  K
Sbjct: 222 ILDVIGDETK 231


>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
          Length = 296

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 14/231 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           + QE  + +D +L  +    A H++         A+RY+LL GGK+IR  L    A    
Sbjct: 10  RCQEVEQALDQLLPPIEGPLAGHVE---------AMRYSLLAGGKRIRPILCLAAAEALP 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    L V AA+ECIH YSLIHDDLP+MD+  +RRG PT H ++ E  AI+AG+GLL++
Sbjct: 61  TDSRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDGLLSF 120

Query: 127 AFEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           AFE+++ P      +   QL L  ++   IG  GM+GGQ+LDI+ E   I+  Q+  I +
Sbjct: 121 AFELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQQIHR 180

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KTGAL+  A +SGAI   A + + E L  +GE +G+ FQ+ DDLL+   D
Sbjct: 181 CKTGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGD 231


>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
 gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
          Length = 290

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GA
Sbjct: 130 GEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
 gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
          Length = 290

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GA
Sbjct: 130 GEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|165976224|ref|YP_001651817.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165876325|gb|ABY69373.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 297

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 129/201 (64%), Gaps = 6/201 (2%)

Query: 35  HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           ++  L+ A+ YA LLGGK++R FL+     + +V         AA+E IH YSL+HDDLP
Sbjct: 30  YDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLP 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT HI +DE TAI+AG+ L ++AFE+I+  ++ L D+ + + + SLT  
Sbjct: 90  AMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDES-LTDSQKVRQIQSLTQA 148

Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN--EKER 209
            G +GM  GQ LD+  +D+ ++  ++ +I + KTGAL+  +   G  ++  SQN   K++
Sbjct: 149 AGARGMCLGQSLDLLAEDKAVNLAELELIHRNKTGALIIASVLMGFNLSAHSQNLAVKQQ 208

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  + + +G+ FQ+ DD+LD 
Sbjct: 209 LERYAQAIGLAFQVQDDILDV 229


>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 312

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 130/230 (56%), Gaps = 6/230 (2%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S  QE +  I  +  ++     + +   + +RL  ++RY+LL GGK+IR  L      L 
Sbjct: 14  SSEQEFNAYIKNVNAEIERALDASVPMHYPERLSESMRYSLLAGGKRIRPALCLAACELV 73

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A+    A+E IH  SLIHDDLPSMDN   RRGKPT H  Y E  AI+AG+ LL+
Sbjct: 74  GGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLS 133

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----I 180
           +AFE I      +  +   ++++ +   +G +G++GGQ++DI  E  DE  V +     I
Sbjct: 134 HAFEYIGRETKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTLKYI 193

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              KTGAL+  +  +GAI+  AS+ +  +L  + +N+G+ FQ+ DD+LDC
Sbjct: 194 HAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDC 243


>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
           15579]
 gi|187773137|gb|EDU36939.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
           15579]
          Length = 290

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 131/215 (60%), Gaps = 4/215 (1%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L+    +L+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLLLNTYALYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+     +  +
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGE 131

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198
           N   +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GAI
Sbjct: 132 NAL-KACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAI 190

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 191 LGSATSTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120]
 gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120]
          Length = 293

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/190 (43%), Positives = 112/190 (58%), Gaps = 3/190 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV       N + L  +R   A+E IH YSLIHDDLP+MDN   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALNADPLLGVRTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + + TAI+AG+ LLT AF I++  +  L    R  L+  ++ + G +GM+GGQ  D++
Sbjct: 103 KIFGDATAILAGDALLTLAFSILAEDE-NLSFETRLALIKEISFSSGAEGMVGGQQADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A A   + +RLR F EN+GI FQ++DD
Sbjct: 162 AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADSEQTKRLRIFAENIGIGFQISDD 221

Query: 227 LLDCEEDLPK 236
           +LD   D  K
Sbjct: 222 ILDVIGDETK 231


>gi|126741029|ref|ZP_01756712.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6]
 gi|126717955|gb|EBA14674.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6]
          Length = 293

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/205 (43%), Positives = 126/205 (61%), Gaps = 10/205 (4%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
            D L  A+RYAL GGK +R FLV E A L  V+   AL    AIEC+H YSL HDDLP M
Sbjct: 33  EDNLHQAMRYALKGGKMLRGFLVLESARLHGVSQKVALDAALAIECLHAYSLAHDDLPCM 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG+PT+H ++DE  A++AG+ L  +AFE++S+P   +  N  S L+  L  + G
Sbjct: 93  DDDDLRRGQPTLHRKWDEAMAVLAGDSLQCFAFELLSNP--DMGPNALS-LIRDLAKSAG 149

Query: 156 LQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
             GM+ GQMLDI  E  +      Q+ ++Q  KTG L+ ++  +GA++A A       LR
Sbjct: 150 KDGMVSGQMLDIAAETAETPLTLEQISLLQARKTGCLIEWSASAGAVLAGADSTP---LR 206

Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
            +   LG+ FQ+ADD+LD E D+ K
Sbjct: 207 QYATALGLAFQIADDILDVEGDVQK 231


>gi|217964491|ref|YP_002350169.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Listeria monocytogenes HCC23]
 gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Listeria monocytogenes HCC23]
 gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99]
          Length = 293

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MDN   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + + TAI+AG+ LLT AF I++  +  L    R  L+  ++ + G +GM+GGQ+ D++
Sbjct: 103 KVFGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGAEGMVGGQLADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A A   + +RLR F EN+GI FQ++DD
Sbjct: 162 AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDD 221

Query: 227 LLDC 230
           +LD 
Sbjct: 222 ILDV 225


>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
           LSv54]
 gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
           psychrophila LSv54]
          Length = 298

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 133/232 (57%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L++    ++  +D  +L+ +   +       + A+RY+L  GGK+IR  L    A     
Sbjct: 7   LEQKRSLVEEAMDRFMLEESGPFKKH-----IEAMRYSLFAGGKRIRPILCLAAADSICA 61

Query: 68  NHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              T    L V  A+ECIH YSLIHDDLP+MD+  +RRGK T H+ Y E  AI+AG+GLL
Sbjct: 62  QERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGAILAGDGLL 121

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDETQVF 178
           ++AF++I+    + K N+ ++  L + H +    G  GM+GGQ LDIQ E   ID   + 
Sbjct: 122 SWAFDLIAD---RGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEIDFDTLA 178

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            I + KTGAL+  +  SGAI A A+  +   L  +G N+G+ FQ+ DDLLD 
Sbjct: 179 TIHRSKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDA 230


>gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208]
          Length = 293

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MDN   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + + TAI+AG+ LLT AF I++  +  L    R  L+  ++ + G +GM+GGQ+ D++
Sbjct: 103 KVFGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGAEGMVGGQLADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A A   + +RLR F EN+GI FQ++DD
Sbjct: 162 AESKQVTLEELSSIHARKTGELLIFAITSAAKIAEADPEQTKRLRIFAENIGIGFQISDD 221

Query: 227 LLDC 230
           +LD 
Sbjct: 222 ILDV 225


>gi|254282519|ref|ZP_04957487.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
 gi|219678722|gb|EED35071.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
          Length = 279

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCYSLIHDDL 92
           + +L +A  Y L   GK++R+ LV E A++      +     V  AIE +H YSL+HDDL
Sbjct: 13  DPQLAAAAEYVLANPGKQLRAKLVRETAAMLGSADPNCGVETVATAIELLHSYSLVHDDL 72

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN  +RRG+PTVH  +DE TAI+ G+G    AFEII+   + L    R +L   L+ 
Sbjct: 73  PAMDNDDLRRGRPTVHRAFDEATAILVGDGFQARAFEIIAR-DSSLSAEQRVELFALLSQ 131

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G +GM+GGQ LD+  E       ++  + ++KTGAL+  A   GAI+A A++   +RL
Sbjct: 132 AVGFEGMVGGQALDMAAEHQQCGIAELTRLHRLKTGALIQAAVVGGAIVAGANRETLDRL 191

Query: 211 RCFGENLGIIFQLADDLLD---CEEDLPK 236
             F  NLG+ FQ+ DD+LD   C +DL K
Sbjct: 192 ATFAMNLGLAFQVIDDVLDVTACSDDLGK 220


>gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e]
 gi|224499942|ref|ZP_03668291.1| hypothetical protein LmonF1_09784 [Listeria monocytogenes Finland
           1988]
 gi|224501694|ref|ZP_03670001.1| hypothetical protein LmonFR_04127 [Listeria monocytogenes FSL
           R2-561]
 gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
 gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
 gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
 gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e]
 gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
 gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
 gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
          Length = 293

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 119/200 (59%), Gaps = 12/200 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y++  GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MD
Sbjct: 31  RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154
           N   RRGK T H  + + TAI+AG+ LLT AF I++       DN+  +  ++L + I  
Sbjct: 91  NDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAE-----DDNLSFETRIALINQISF 145

Query: 155 --GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+GGQ+ D++ E    T  ++  I   KTG L+ +A  S A +A A   + +RL
Sbjct: 146 SSGAEGMVGGQLADLEAENKQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRL 205

Query: 211 RCFGENLGIIFQLADDLLDC 230
           R F EN+GI FQ++DD+LD 
Sbjct: 206 RIFAENIGIGFQISDDILDV 225


>gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
           monocytogenes FSL J2-071]
 gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
           monocytogenes FSL J2-071]
          Length = 285

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 111/184 (60%), Gaps = 3/184 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MDN   RRGK T H
Sbjct: 35  GGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH 94

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + + TAI+AG+ LLT AF I++  +  L    R  L+  ++ + G +GM+GGQ+ D++
Sbjct: 95  KVFGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGAEGMVGGQLADME 153

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A A   + +RLR F EN+GI FQ++DD
Sbjct: 154 AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDD 213

Query: 227 LLDC 230
           +LD 
Sbjct: 214 ILDV 217


>gi|269958629|ref|YP_003328416.1| geranyltranstransferase [Anaplasma centrale str. Israel]
 gi|269848458|gb|ACZ49102.1| geranyltranstransferase [Anaplasma centrale str. Israel]
          Length = 290

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 127/229 (55%), Gaps = 4/229 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
           S +++  +    ++   L+Q AS      +  L  A+ Y +   GK IRSFL +  A +F
Sbjct: 10  SDIRQKVEDFSCLVRKELVQIASTKAECPSTVLYEALSYTISNPGKCIRSFLASTSARVF 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V+    LR+GAAIE +H YSL+HDDLPSMDN   RRG+ + H ++ E  A++ G+ LLT
Sbjct: 70  GVSAERTLRLGAAIEAVHAYSLVHDDLPSMDNSPTRRGRESCHTKFGEAVAVLTGDALLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMK 184
             FE++S+        +R +++  L+   G  GM+ GQ LDI+       + V  I ++K
Sbjct: 130 LTFELLSTMDEGCA--VRCKIIELLSKACGRCGMVAGQALDIEAHSSTSFEGVRRIHELK 187

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   ACE+GA++  AS  E+  L  +G  LG  FQ  DDL D  ED
Sbjct: 188 TARLFSAACEAGAVLGGASTKERAALAEYGSALGCAFQAKDDLNDAGED 236


>gi|254829880|ref|ZP_05234535.1| hypothetical protein Lmon1_00925 [Listeria monocytogenes 10403S]
          Length = 293

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 12/200 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y++  GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MD
Sbjct: 31  RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154
           N   RRGK T H  + + TAI+AG+ LLT AF I++       DN+  +  ++L + I  
Sbjct: 91  NDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAE-----DDNLSFETRIALINQISF 145

Query: 155 --GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+GGQ+ D++ E   +   ++  I   KTG L+ +A  S A +A A   + +RL
Sbjct: 146 SSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRL 205

Query: 211 RCFGENLGIIFQLADDLLDC 230
           R F EN+GI FQ++DD+LD 
Sbjct: 206 RIFAENIGIGFQISDDILDV 225


>gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
          Length = 284

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 6   ELWLKEHLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 65

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 66  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 123

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GA
Sbjct: 124 GEKAVKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKSSILAGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 184 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 219


>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
          Length = 297

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/222 (40%), Positives = 129/222 (58%), Gaps = 9/222 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KR+D  L+ L  +  S    +   RL   IRY+LL GGK+IR  L          +  + 
Sbjct: 12  KRVDKALEALFERELS----REYGRLAEGIRYSLLAGGKRIRPVLALAAIEAVGGDGESL 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +   +E +H YSL+HDDLP+MDN  +RRG+PT H+ Y E  AI+AG+ LLT+AF ++S
Sbjct: 68  LPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLTHAFTLLS 127

Query: 133 SP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL 188
            P     L  + R +++  L+   GL GM+GGQ LDI  E  + T  ++  + + KTGAL
Sbjct: 128 DPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLHRHKTGAL 187

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +  +   G I+A AS    E L  +GE +GI FQ+ADDLLD 
Sbjct: 188 LRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDV 229


>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
 gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
          Length = 293

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 118/194 (60%), Gaps = 5/194 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y+L+ GGK+IR  LV E   +   +   AL    A+E IH YSLIHDDLP+MD+
Sbjct: 34  LREAMEYSLMAGGKRIRPVLVLESCRMCGGDPEVALPFACAVEMIHTYSLIHDDLPAMDD 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+PT H+ Y E TAI+AG+GLLT AF+ ++  +   +  + +   LSL    G  
Sbjct: 94  DELRRGRPTNHMVYGEATAILAGDGLLTAAFQTLTQAQLTAQQVVDAVACLSLA--AGPD 151

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD+  E   +   ++  +Q +KTGAL+  A E G I A  S  ++E +R + +
Sbjct: 152 GMVGGQALDMAGEGRSLTRAELEQLQSLKTGALIAAAAELGCIAAGGSPEQRESVRQYAQ 211

Query: 216 NLGIIFQLADDLLD 229
            LG  FQ+ DD+LD
Sbjct: 212 CLGRAFQVQDDILD 225


>gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713]
          Length = 305

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 127/203 (62%), Gaps = 14/203 (6%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  L  ++RY++  GGK+IR  LV   A SL      +  +V  ++E +H YSLIHDDLP
Sbjct: 39  NQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLP 98

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN  +RRGKPT H ++ +  A++AG+GLLT +FE +S   T + ++ + +L+  L   
Sbjct: 99  EMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALA 156

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207
            G QGM+ GQ     D+ + E++ + ++++      KTGAL+ +AC +G I++ AS N+ 
Sbjct: 157 AGPQGMVSGQT----DDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 212

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           E LR +GEN G+ FQ+ DDLLD 
Sbjct: 213 ELLRKYGENFGLAFQIYDDLLDV 235


>gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
 gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
          Length = 305

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 127/203 (62%), Gaps = 14/203 (6%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  L  ++RY++  GGK+IR  LV   A SL      +  +V  ++E +H YSLIHDDLP
Sbjct: 39  NQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLP 98

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN  +RRGKPT H ++ +  A++AG+GLLT +FE +S   T + ++ + +L+  L   
Sbjct: 99  EMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALA 156

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207
            G QGM+ GQ     D+ + E++ + ++++      KTGAL+ +AC +G I++ AS N+ 
Sbjct: 157 AGPQGMVSGQT----DDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 212

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           E LR +GEN G+ FQ+ DDLLD 
Sbjct: 213 ELLRKYGENFGLAFQIYDDLLDV 235


>gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
 gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
          Length = 295

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/197 (44%), Positives = 121/197 (61%), Gaps = 9/197 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RY+LL GGK+IR FLV     +  V+      +  AIECIHCYSLIHDDLP+MDN
Sbjct: 33  LADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLPAMDN 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RR  PT HI +DE TAI+AG+ L +YAFE+++ SP    +  ++ QL   L +  G 
Sbjct: 93  DTLRRNNPTCHIAFDEATAILAGDALQSYAFELLAKSPIADQQKILQFQL---LANASGA 149

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRC 212
           +GM  GQ LD+  +++ I   ++  I K KTGAL+  A   G   +   QNE  K++L  
Sbjct: 150 EGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQKLIS 209

Query: 213 FGENLGIIFQLADDLLD 229
           F   +G+ FQ+ DD+LD
Sbjct: 210 FSAAIGLAFQVQDDILD 226


>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
 gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
          Length = 303

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 133/234 (56%), Gaps = 16/234 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV----TECAS 63
           LQ   + ++ +LDDL+   A  +      RL  A+RYA+LGG K++R+ +V      C  
Sbjct: 12  LQGRVRHVEDVLDDLM-PPAEVLPV----RLHEAMRYAVLGGGKRVRAAMVYAAGQACPV 66

Query: 64  LFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +V  + A   R  AA+E IH YSL+HDDLP MDN  +RRG+PT H+Q+DE TA++AG+
Sbjct: 67  SGSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAMLAGD 126

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
            L   AF++++S    +   +  Q   SL    G QGM GGQ +D+      +   ++  
Sbjct: 127 ALQPLAFDLLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRDELQT 184

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D
Sbjct: 185 MHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTAD 238


>gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
          Length = 290

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   +++ +Q+ K GAL+  +  +GA
Sbjct: 130 GEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMQQKKAGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118]
 gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118]
          Length = 297

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 127/203 (62%), Gaps = 14/203 (6%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  L  ++RY++  GGK+IR  LV   A SL      +  +V  ++E +H YSLIHDDLP
Sbjct: 31  NQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLP 90

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN  +RRGKPT H ++ +  A++AG+GLLT +FE +S   T + ++ + +L+  L   
Sbjct: 91  EMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALA 148

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207
            G QGM+ GQ     D+ + E++ + ++++      KTGAL+ +AC +G I++ AS N+ 
Sbjct: 149 AGPQGMVSGQT----DDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 204

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           E LR +GEN G+ FQ+ DDLLD 
Sbjct: 205 ELLRKYGENFGLAFQIYDDLLDV 227


>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 299

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 128/229 (55%), Gaps = 19/229 (8%)

Query: 24  LLQTASHMQTQHNDRL--------------LSAIRY-ALLGGKKIRSFLVTECASLFNVN 68
           LLQ   H Q ++N +L              L A++Y ALLGGK++R FL     ++  VN
Sbjct: 6   LLQLLQHYQERNNQQLTHWLDAQPFADQTLLKAMKYGALLGGKRVRPFLTYVTGNMLGVN 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                   AAIECIH YSLIHDDLP+MD+  +RRG+PT HI +DE TA++AG+ L T AF
Sbjct: 66  EENLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAGDALQTLAF 125

Query: 129 EIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           EI++     +  ++ R +++  L    G  GM  GQ LD+  E   +  TQ+  I K KT
Sbjct: 126 EILAEGTLSIDGESQRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQLEQIHKHKT 185

Query: 186 GALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  A   GA+ A     E   +L  + E +G+ FQ+ DD+LD   D
Sbjct: 186 GALIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISD 234


>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
 gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
          Length = 343

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 123/204 (60%), Gaps = 9/204 (4%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +RL  ++RY+LL GGK+IR  L      L       A+    A+E IH  SLIHDDLP
Sbjct: 72  YPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMEVAMPTACALEMIHTMSLIHDDLP 131

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLT 151
           SMDN   RRGKPT H  Y E  AI+AG+ LL++AFE I   +PK+   +    ++++ + 
Sbjct: 132 SMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETPKSVPAERTL-RVLVDVG 190

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNE 206
             +G +G++GGQ++DI  E  D  +V +     I   KTGAL+  +  SGAI+A A + +
Sbjct: 191 KCVGSEGLVGGQVVDIMSEGADADEVTLETLKYIHAHKTGALLEVSVTSGAILAGAKEED 250

Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
            ERL  + + +G+ FQ+ DD+LDC
Sbjct: 251 VERLGKYAQLIGLAFQVVDDILDC 274


>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
           Desulfobacterium sp.]
          Length = 316

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 138/239 (57%), Gaps = 21/239 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           L S   E +K I   L +++ ++ S  Q      L  A+ Y+L+  GK+IR  L    A 
Sbjct: 24  LESYFAEKTKTIKNELINIINKSNSFGQ------LSKAMEYSLISEGKRIRPILCIAAAE 77

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    L    AIE IH YSLIHDDLP++DN  +RRGKPT H  ++E TAI+AG+ L
Sbjct: 78  SVGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAGDAL 137

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFIDETQVFM 179
           LT AF+++S  + +L +N  +   L + + I    G  GM+ GQM DI  E    TQ+ +
Sbjct: 138 LTLAFQVLS--EFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRDIASE---NTQILL 192

Query: 180 -----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                +  +KTGAL+  + ESGAI+A+AS ++ ++L+ + + +G+ FQ+ADDLL+   D
Sbjct: 193 NKLEELHILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGD 251


>gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898472|ref|ZP_05258396.1| hypothetical protein LmonJ_01615 [Listeria monocytogenes J0161]
 gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818]
 gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900]
 gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
 gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900]
 gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818]
          Length = 293

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 12/206 (5%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y++  GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MD
Sbjct: 31  RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154
           N   RRGK T H  + + TAI+AG+ LLT AF I++       DN+  +  ++L + I  
Sbjct: 91  NDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAE-----DDNLSFETRIALINQISF 145

Query: 155 --GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+GGQ+ D++ E   +   ++  I   KTG L+ +A  S A +A A   + +RL
Sbjct: 146 SSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTSAAKIAEADLEQTKRL 205

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
           R F EN+GI FQ++DD+LD   D  K
Sbjct: 206 RIFAENIGIGFQISDDILDVIGDETK 231


>gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171]
          Length = 293

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 113/190 (59%), Gaps = 3/190 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV         + +  ++V  A+E IH YSLIHDDLP+MDN   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALQADPMRGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y + TAI+AG+ LLT AF I++  +  L    R  L+  ++ + G +GM+GGQ  D++
Sbjct: 103 KVYGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISFSSGAEGMVGGQQADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A AS  + +RLR F EN+G+ FQ++DD
Sbjct: 162 AENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDD 221

Query: 227 LLDCEEDLPK 236
           +LD   D  K
Sbjct: 222 ILDVIGDETK 231


>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
           F0359]
 gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
           F0359]
          Length = 293

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 124/227 (54%), Gaps = 9/227 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           + L+   KRIDT L +LL QT+    T     L  A+ Y+L  GGK+IR  L        
Sbjct: 5   TSLESRKKRIDTRLAELL-QTS----TPEFSGLYEAMNYSLNAGGKRIRPVLFLAVLEAA 59

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +    L +  A+EC+H YSLIHDDLP+MDN   RRGKPT H  Y + TA++AG+GLLT
Sbjct: 60  GTDPDAFLDLACALECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDGLLT 119

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKM 183
           YAFE++++        I   + +   H  G  GM+GGQ  D+Q E    T+  M  + + 
Sbjct: 120 YAFELMAAQSAAPAHKILQAIRI-FAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELMHRS 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTG +     +  A++A       + L  +G+ LG+ FQ+ DD+LD 
Sbjct: 179 KTGVIFTAIVQMAALLAGVRNETMKALTTYGDQLGLAFQITDDILDV 225


>gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 277

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 127/203 (62%), Gaps = 14/203 (6%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  L  ++RY++  GGK+IR  LV   A SL      +  +V  ++E +H YSLIHDDLP
Sbjct: 11  NQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLP 70

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN  +RRGKPT H ++ +  A++AG+GLLT +FE +S   T + ++ + +L+  L   
Sbjct: 71  EMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSL--TDIDNDKKIKLISQLALA 128

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207
            G QGM+ GQ     D+ + E++ + ++++      KTGAL+ +AC +G I++ AS N+ 
Sbjct: 129 AGPQGMVSGQT----DDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQL 184

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           E LR +GEN G+ FQ+ DDLLD 
Sbjct: 185 ELLRKYGENFGLAFQIYDDLLDV 207


>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
 gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
          Length = 307

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 124/208 (59%), Gaps = 9/208 (4%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +++  A+RY+LL GGK++R  L      L       A+    A+E IH  SLIHDDLP+M
Sbjct: 42  EKIYEAMRYSLLAGGKRLRPILCLATCELMGGTIEMAMPTACALEMIHTMSLIHDDLPAM 101

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRGK T H  Y E  AI+AG+GLL+YAFE +++    +  N   Q++  L   +G
Sbjct: 102 DNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEFVATQTRNVPPNQVLQVIARLGRTVG 161

Query: 156 LQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
             G++GGQ+LD++ E       ET  F I   KTGAL+  +  SGAI+A A+  ++ RL 
Sbjct: 162 AAGLVGGQVLDLESEGKLDITAETLTF-IHTHKTGALLETSVLSGAILAGATSEDQRRLS 220

Query: 212 CFGENLGIIFQLADDLLD---CEEDLPK 236
            + +N+G+ FQ+ DD+LD    +E+L K
Sbjct: 221 RYAQNIGLAFQIIDDILDITSTQEELGK 248


>gi|313891715|ref|ZP_07825320.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
 gi|313119709|gb|EFR42896.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
          Length = 284

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 5/198 (2%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++ Y+LL  GK+IR  L      +F V++L  L + A++EC+H YSLIHDDLP MDN
Sbjct: 31  LFDSMNYSLLSNGKRIRGCLFLFILEMFKVDYLQYLDIAASVECVHTYSLIHDDLPCMDN 90

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG  T H +Y E  A+ AG+ LLT+AF++IS  K   KD  R +L+  L+   G +
Sbjct: 91  DDYRRGILTNHKKYGEGVALQAGDALLTFAFQLISQAKFSAKD--RCKLIEILSIAAGAE 148

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+ GQ+ DIQ E   I+  ++ ++ K KTG ++    +    + H S ++ E+LR F +
Sbjct: 149 GMVAGQVHDIQIENRSIELDELKLLDKFKTGRMIKAPVDMAIQLTHMSISDAEQLRKFAK 208

Query: 216 NLGIIFQLADDLLDCEED 233
           +LG++FQ+ DD+LD +ED
Sbjct: 209 HLGLLFQITDDILDYKED 226


>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
 gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
          Length = 289

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 7/213 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAI 79
           ++ + TA   QT + ++L  ++RY++  GGK+IR  L+    +L+  N   A+ +V AA+
Sbjct: 12  EMTMLTAISEQT-NEEQLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVAAAV 70

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF+++   + +L 
Sbjct: 71  ELVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLG--QAELA 128

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGA 197
           D+ +   +  L    G  GM+ GQ  DI+ E   +   Q+  I   KTG L+ F+  +G 
Sbjct: 129 DDKKVACLTLLAQTAGTLGMVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVIAGG 188

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           I+  AS  E+ +L  F   LG+ FQ+ DDLLD 
Sbjct: 189 IIGGASAKEQAQLDSFARKLGLAFQIKDDLLDV 221


>gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305]
 gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305]
          Length = 299

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 33  TQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           + H+  L+ A+ YA LLGGK++R FL+     +  V+        AA+E IH YSL+HDD
Sbjct: 30  SAHHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVSLKALDHSAAAMESIHAYSLVHDD 89

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRGKPT HI +DE TAI+AG+ L T+AFE+I+     L D  + + + SL 
Sbjct: 90  LPAMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAFELIAKDPF-LTDLQKIKQIQSLA 148

Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM  GQ LD+  +++ I  +++ +I + KTGAL+  +   G  ++  +Q+EK +
Sbjct: 149 KAAGAKGMCLGQSLDLISENKAISLSELELIHRNKTGALIVASVLMGFNLSDYAQDEKIK 208

Query: 210 --LRCFGENLGIIFQLADDLLDCEEDLPK 236
             L C+ + +G+ FQ+ DD+LD   D  K
Sbjct: 209 NALECYAKAIGLAFQVQDDILDVIGDTDK 237


>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
 gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
          Length = 306

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 3/225 (1%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           ++++++TI   L    A          L  A+RYA+L GGK++R  LV       N N  
Sbjct: 16  SAQQLETIEQALSRWVACPTDAPAPAGLGDAMRYAVLDGGKRLRPLLVMAACEAVNGNAE 75

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            ALR   A+E IH YSL+HDD+P MDN  +RRGKPTVH+++ E  A++AG+ L   AFE 
Sbjct: 76  AALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGDALQALAFEF 135

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL 188
           ++     +    +++L   L    G QGM GGQ +D+    +  T  Q+  + ++KTGAL
Sbjct: 136 LTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQLHEMHRLKTGAL 195

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +   G     A    +  LR +G  +G+ FQ+ DD+LD   D
Sbjct: 196 LQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTAD 240


>gi|163734437|ref|ZP_02141877.1| geranyltranstransferase [Roseobacter litoralis Och 149]
 gi|161392445|gb|EDQ16774.1| geranyltranstransferase [Roseobacter litoralis Och 149]
          Length = 289

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 133/224 (59%), Gaps = 20/224 (8%)

Query: 25  LQTASHMQTQHNDRLLS---------AIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           L+ A      H D++L+         A+ +A  GGK++R FLV E A L ++    A+  
Sbjct: 6   LEAAGAAVQAHFDKVLAEFEPLPIVEAMAHATSGGKRLRGFLVLETARLHDIAAGEAIWS 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIE +H YSL+HDDLP MD+  +RRG+PTVH ++D+ TA++AG+ L T AFE+++ P 
Sbjct: 66  ATAIEALHAYSLVHDDLPCMDDDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPG 125

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQVFMIQKMKTGALM 189
                 +R+ L LSL    G QGM+ GQ LDI  E       +DE  +  +Q+ KTGAL+
Sbjct: 126 ASPSAEVRADLALSLARASGAQGMVLGQALDIAAETAHTPLSLDE--ITRLQQGKTGALI 183

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++ ++GA +A   Q +   L+ + + LG+ FQ+ADD+LD   D
Sbjct: 184 GWSAQAGARLA---QADTAALKRYAQALGLAFQIADDILDVTGD 224


>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
          Length = 297

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 133/233 (57%), Gaps = 22/233 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           LQ+  +R++  L   + + A+       + +  A+ Y+L  GGK+IR  L+      F  
Sbjct: 10  LQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLLFATLHSFGK 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+AG+GLLTYA
Sbjct: 64  EPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYA 123

Query: 128 FEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           F++I+       SP T+++      L+  L    G +GM+ GQ+ DI+ E   +   Q+ 
Sbjct: 124 FQVIAEANDARISPMTKIR------LIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLE 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I + KTG ++ ++  +GA++A A+  +  +L  F  +LG+ FQ+ DD+LD E
Sbjct: 178 YIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIE 230


>gi|304440276|ref|ZP_07400166.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371325|gb|EFM24941.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 289

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 12/208 (5%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93
           ++  +++Y+L  GGK++R  L     S+FN    N    +    A+E IH YSLIHDDLP
Sbjct: 30  KIYESMKYSLSTGGKRVRPILALVSYSIFNDDSKNFSEIIPFAVALEYIHTYSLIHDDLP 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN  IRRGKPT H  Y+E  AI+AG+GLL  A E+++     + D I+ +  +     
Sbjct: 90  AMDNDDIRRGKPTNHKVYNEAIAILAGDGLLNLAAEVVAKELEGITDPIKLKRAIKSFRY 149

Query: 154 I----GLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           I    G+QGM+GGQ +DI D  +DE    +V  + K+KTGAL+      GAIM  A+  E
Sbjct: 150 IFSSSGIQGMVGGQTIDI-DLSVDEMSLEEVETMYKLKTGALIKAPLAVGAIMGGATPEE 208

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDL 234
              +  + E LG+ +Q+ DD+LD E+DL
Sbjct: 209 LISIEGYAEQLGLQYQIKDDILDYEDDL 236


>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
           95/1000]
 gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
           95/1000]
          Length = 295

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 133/223 (59%), Gaps = 9/223 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K ID+ ++++    +S +  ++N   L  ++Y L  GGK++R  L      LFN ++  A
Sbjct: 12  KDIDSEINNIF--KSSSISLENN--FLDMLKYPLDAGGKRLRPILTCLACELFNGDYKKA 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    ++E IH YSL+HDDLP+MDN  +RRGKPT H++Y E  AI+ G+GLLT++FEI+S
Sbjct: 68  IIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLTHSFEILS 127

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMC 190
           +    + D    +L+  +++  G+ GM+ GQ +D+  ++  ID   + ++   KTGA++ 
Sbjct: 128 N--ANVNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKILHSKKTGAMIR 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A   GAI +       E +  +GE +G+ FQ+ DD+LD   D
Sbjct: 186 GAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISD 228


>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
 gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
          Length = 290

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 132/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   ++  + K KTGAL+  +  +GA
Sbjct: 130 GEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|295399115|ref|ZP_06809097.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978581|gb|EFG54177.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 297

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 133/233 (57%), Gaps = 22/233 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           LQ+  +R++  L   + + A+       + +  A+ Y+L  GGK+IR  L+      F  
Sbjct: 10  LQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLLFATLHSFGK 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+AG+GLLTYA
Sbjct: 64  EPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYA 123

Query: 128 FEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           F++I+       SP T+++      L+  L    G +GM+ GQ+ DI+ E   +   Q+ 
Sbjct: 124 FQVIAEADDARISPMTKIR------LIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLE 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I + KTG ++ ++  +GA++A A+  +  +L  F  +LG+ FQ+ DD+LD E
Sbjct: 178 YIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIE 230


>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
           657]
 gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
           657]
          Length = 290

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 132/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   ++  + K KTGAL+  +  +GA
Sbjct: 130 GEKALKACYTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
 gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
 gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
          Length = 295

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 129/231 (55%), Gaps = 16/231 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           E  KR D + + LL +        +++ L  A+ Y+L+ GGK++R  L+   A     + 
Sbjct: 8   EWKKRADLVEEGLLRELKK--VPAYDETLEKAMEYSLMAGGKRLRPVLLMAAADAVGKDG 65

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L  G AIE IH YSLIHDDLP+MDN   RRGKPT H  + +  A++AG+ LLT AFE
Sbjct: 66  AAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALLTLAFE 125

Query: 130 II-----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182
           ++     ++P+T +       ++  ++   G  GM+GGQ+LD++ E   +D   +  I  
Sbjct: 126 VMLRQEGAAPETLV------TVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKIHM 179

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KTGAL C A  SGAI+A A + E   L  + E  G+ FQ+ DD+LD   D
Sbjct: 180 GKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGD 230


>gi|227544389|ref|ZP_03974438.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
 gi|300909750|ref|ZP_07127211.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
 gi|227185652|gb|EEI65723.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
 gi|300893615|gb|EFK86974.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
          Length = 290

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L S++ Y+L+ GGK++R  L +T    L    +   LR  +A+E +H YSLIHDDLP+MD
Sbjct: 29  LESSMSYSLMAGGKRLRPALTLTTIEMLGGTLNDDLLRAASALELLHTYSLIHDDLPAMD 88

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H ++    A +AG+GLLT AF+ ++     L  N+RSQL L L    G 
Sbjct: 89  NDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVAD--NHLPANVRSQLTLELAKAAGP 146

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQ  DI+ E   ++  Q+  + + KTG L+ +A  +G IM   S   K+ L  FG
Sbjct: 147 SGMVAGQARDIEGEHQHLNLNQLKYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFG 206

Query: 215 ENLGIIFQLADDLLDC 230
           EN G+ FQ+ DDL+D 
Sbjct: 207 ENYGLAFQIYDDLMDV 222


>gi|283834262|ref|ZP_06354003.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
 gi|291069784|gb|EFE07893.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
          Length = 299

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSL+HDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGQMFGVSLSTLDAPAAAVECIHAYSLMHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MDN  +RRG PT H+++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L  
Sbjct: 88  AMDNDDLRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVADRDRIAMLSELAQ 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD++ E   ++   +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLEAEGHQVELDALERIHRHKTGALIRAAVRLGAL----SAGDKGRE 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 CLAILDKYAESIGLAFQVQDDILDVVGD 231


>gi|314936356|ref|ZP_07843703.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80]
 gi|313654975|gb|EFS18720.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80]
          Length = 293

 Score =  145 bits (365), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N +L  +++Y+L  GGK+IR  LV     + N N+   L+   A+E IH YSLIHDDLP+
Sbjct: 27  NTKLEESMQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPA 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  Y E  AI+AG+ LLT +FE+I++ K  L    + +++  L H+ 
Sbjct: 87  MDNDDFRRGKLTNHKVYGEWKAILAGDALLTKSFELIANDKN-LDAETKVKVISRLAHDS 145

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ LD+  E   I+   +  I K KTGAL+ F+  S A +A+ ++     L C
Sbjct: 146 GNLGMVGGQTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNKEILNTLDC 205

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           F E+LG++FQ+ DDLLD   D  K
Sbjct: 206 FSEHLGLMFQIKDDLLDVYGDEKK 229


>gi|228476147|ref|ZP_04060855.1| geranyltranstransferase [Staphylococcus hominis SK119]
 gi|228269970|gb|EEK11450.1| geranyltranstransferase [Staphylococcus hominis SK119]
          Length = 296

 Score =  145 bits (365), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N +L  +++Y+L  GGK+IR  LV     + N N+   L+   A+E IH YSLIHDDLP+
Sbjct: 30  NTKLEESMQYSLDAGGKRIRPVLVLLTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPA 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  Y E  AI+AG+ LLT +FE+I++ K  L    + +++  L H+ 
Sbjct: 90  MDNDDFRRGKLTNHKVYGEWKAILAGDALLTKSFELIANDKN-LDAETKVKVISRLAHDS 148

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ LD+  E   I+   +  I K KTGAL+ F+  S A +A+ ++     L C
Sbjct: 149 GNLGMVGGQTLDMDSENTPIELHTLEQIHKAKTGALLKFSILSAADIANVNKEILNTLDC 208

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           F E+LG++FQ+ DDLLD   D  K
Sbjct: 209 FSEHLGLMFQIKDDLLDVYGDEKK 232


>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
          Length = 297

 Score =  145 bits (365), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 6/204 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +N  L  A++Y LL GGK++R FLV     +            AAIE IH YSLIHDDLP
Sbjct: 30  YNAHLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLP 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN  +RRG+PT HI +DE TAI+AG+ L  +AFEI++   + L    + QL+  L   
Sbjct: 90  AMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEILTEAPS-LSAEQKLQLVKVLAQA 148

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209
            G+QGM  GQ LD+  E   ++  ++ +I + KTGAL+  A + G I +   +N+  +++
Sbjct: 149 SGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQQ 208

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + + +G+ FQ+ DD+LD E D
Sbjct: 209 LERYSQTIGLAFQVQDDILDIEGD 232


>gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
 gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP]
          Length = 308

 Score =  145 bits (365), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 134/235 (57%), Gaps = 11/235 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M   L + L    +RI+  L + L Q+ +         L  A+ YA LLGGK+IR FL+ 
Sbjct: 12  MTYSLTTDLNAIQQRINHFLSNQLPQSPTEQPP-----LNQAMAYAVLLGGKRIRPFLMY 66

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V   T     AAIE IH YSL+HDDLP+MDN  +RRGKPT HI +DE TAI+A
Sbjct: 67  TTGKMLGVPLTTLDHSAAAIEAIHAYSLVHDDLPAMDNDQLRRGKPTCHIAFDEATAILA 126

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
           GN L   AFE+I++    L D  + Q + +L+   G +GM  GQ LD+  +++ ++ T++
Sbjct: 127 GNALQALAFELIAN-APHLTDWQKVQQIRTLSTAAGAKGMCLGQNLDLLAENKSLNLTEL 185

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDC 230
             I + KTGAL+  +      ++  +QN   K+ L  + + +G+ FQ+ DD+LD 
Sbjct: 186 EQIHRHKTGALIVASVLMAVNLSDHAQNNAIKQPLERYAQAIGLAFQVQDDILDV 240


>gi|169837010|ref|ZP_02870198.1| Dimethylallyltransferase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 269

 Score =  145 bits (365), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 140/238 (58%), Gaps = 10/238 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           LQ+  K    +++D L++   + + ++ ++L  A+ YA++ GGK+IR  L+     LF+ 
Sbjct: 6   LQKYLKEKKKVVEDNLMELLGNYRDKYPEKLAKAMEYAVMNGGKRIRPILMYMICDLFDE 65

Query: 68  NHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           N  +  ++     A+E IHCYSL+HDDLP+MDN   RRGK TVH +Y+E   ++ G+ LL
Sbjct: 66  NKKSYDKIKEIAVALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLVGDVLL 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           T AF +++S K  L+D  + Q++  L+   G  GM+GGQ +DI+ E   ++   +  I  
Sbjct: 126 TEAFGVVASAKN-LEDKSKVQIISKLSEYAGFFGMVGGQFVDIESEHKKVEIDTLKYIHA 184

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237
            KTG L+  A E   I  +    + +++  + + LGI FQ+ DD+LD E   E++ KK
Sbjct: 185 HKTGKLLTAAIELPMIALNIENEKYQKMVEYSKLLGIAFQIKDDILDIEGNFEEIGKK 242


>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
 gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
          Length = 307

 Score =  144 bits (364), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 9/216 (4%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S +     +++  A+RY+LL GGK++R  L      L       A+    A+E IH  SL
Sbjct: 34  SSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCDLMGGTVEMAMPTACALEMIHTMSL 93

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP+MDN   RRGK T H  Y E  AI+AG+GLL+YAFE +++    +      +++
Sbjct: 94  IHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAFEYVATQTRNVPPEQILEVI 153

Query: 148 LSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
             L   +G  G++GGQ+LD++ E       ET  F I   KTGAL+  +  SGAI+A A+
Sbjct: 154 ARLGRTVGAAGLVGGQVLDLESEGKSDITPETLTF-IHTHKTGALLETSVVSGAILAGAT 212

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           + E E+L  + +N+G+ FQ+ DD+LD    +E+L K
Sbjct: 213 REEVEKLSRYAQNIGLAFQIVDDILDITATQEELGK 248


>gi|254513023|ref|ZP_05125089.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11]
 gi|221533022|gb|EEE36017.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11]
          Length = 288

 Score =  144 bits (364), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/199 (42%), Positives = 124/199 (62%), Gaps = 8/199 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+ YA  GGK++R FLV E A L  ++   A+     IE +H YSL+HDDLP MD+  +R
Sbjct: 32  AMAYATAGGKRLRGFLVLESARLHEIDLARAIWPATGIEALHAYSLVHDDLPCMDDDDLR 91

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PTVH+++DE TA++AG+ L T AFE+ + P+      +R++L L+L    G QGM+ 
Sbjct: 92  RGRPTVHVKWDEGTAVLAGDALQTLAFELCTRPEVG-DAGVRAELALTLAQASGAQGMVL 150

Query: 162 GQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ LDI  E     +   ++  +Q  KTGAL+ ++  +GA MA   Q + + LR +   L
Sbjct: 151 GQALDIAAETAATPLTLPEITRLQSGKTGALIEWSACAGARMA---QADPDPLRQYARAL 207

Query: 218 GIIFQLADDLLDCEEDLPK 236
           G+ FQ+ADD+LD E D  K
Sbjct: 208 GLAFQIADDILDVEGDADK 226


>gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165]
 gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165]
          Length = 297

 Score =  144 bits (364), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/237 (37%), Positives = 137/237 (57%), Gaps = 15/237 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN  L ++L +  +RI+  L + L Q  ++     N  L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MNYDLFAELSQYQQRINHFLSEQLSQYPAY-----NTPLIDAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V          A+E IH YSL+HDDLP+MDN  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175
           G+ L ++AFE+++   +   +   +Q M  L  + G +GM  GQ LD+Q E     +DE 
Sbjct: 116 GDALQSFAFELLAFDPSLTAEQKVAQ-MQWLAKSAGAKGMCLGQSLDLQSEHKAIALDEL 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDC 230
           +   I + KTGAL+  +   G  ++  +Q+   K++L  + E +G+ FQ+ DD+LD 
Sbjct: 175 E--RIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAEAIGLAFQVQDDILDV 229


>gi|261379616|ref|ZP_05984189.1| geranyltranstransferase [Neisseria subflava NJ9703]
 gi|284798098|gb|EFC53445.1| geranyltranstransferase [Neisseria subflava NJ9703]
          Length = 298

 Score =  144 bits (363), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 7/209 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S  Q  H   L  A+RY  LGG K++R  LV   + L   N     +  AAIE +H YSL
Sbjct: 28  SESQVPHT--LHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+P+MDN  +RRGKPT H+QYDE TA++ G+ L T AF+++S P T L    +  ++
Sbjct: 86  VHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TGLPAERQLAML 144

Query: 148 LSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQ 204
            +L    G  GM GGQ +D+ +  + +++ ++  +  +KTGAL+  A   GA+     + 
Sbjct: 145 STLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGALSCPDLTP 204

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
            + + L  +   LG+ FQ+ DD+LDCE D
Sbjct: 205 AQIQTLDRYAAKLGLAFQVIDDVLDCEAD 233


>gi|319941604|ref|ZP_08015928.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B]
 gi|319804834|gb|EFW01688.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B]
          Length = 296

 Score =  144 bits (363), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 115/202 (56%), Gaps = 8/202 (3%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ A+RY+LLGG K+IR  L     ++         R   A+E IH YSL+HDD+PSMD
Sbjct: 25  RLVGAMRYSLLGGGKRIRPLLCYAAGAVSGAPEEVLDRAALALEMIHSYSLVHDDMPSMD 84

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+ T H++Y E  A++AG+ L T AF ++SSP   +      +L+ +L    G+
Sbjct: 85  NDTLRRGRATTHVRYGEAMAMLAGDALQTEAFTVLSSP--SVPPEAAQRLVQTLARAAGV 142

Query: 157 QGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGA---IMAHASQNEKERLR 211
            GM GGQ LD++   +     ++  +Q MKTGA++  A   GA   I        K  L 
Sbjct: 143 WGMCGGQALDLEMVGQKPGAAELSRMQAMKTGAMIMAAVLMGAQSGIWTALGDQAKAGLA 202

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + + LG+ FQ+ DD+LDC +D
Sbjct: 203 AYADALGVAFQVVDDILDCTQD 224


>gi|310829047|ref|YP_003961404.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
 gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
          Length = 297

 Score =  144 bits (363), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 118/202 (58%), Gaps = 5/202 (2%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D ++SA++Y+L  GGK++R  L+ E       +      +  AIE IH YSLIHDDLP+M
Sbjct: 31  DIIVSAMKYSLFAGGKRLRPILMKETCRCLGGDSADVKPLACAIEMIHTYSLIHDDLPAM 90

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHN 153
           DN  +RRGKPT H  Y E  AI+AG+ LL YA E  I   P    K    ++ +  L H+
Sbjct: 91  DNDDLRRGKPTNHKVYGENMAILAGDALLNYAMETAIAGIPVDPSKTFHYTRALSYLAHS 150

Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G+ GM+GGQ  DI  ++E I+E +++ I   KTGAL+  A   G  +A  +  E++ L 
Sbjct: 151 SGVNGMIGGQTGDILSENEAINEEKMYYIHAHKTGALLKAAVLCGGFVAKVTGEERDALE 210

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + E +G+ FQ+ DD+LD   D
Sbjct: 211 TYSEKIGLAFQIVDDILDVTGD 232


>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
 gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
          Length = 299

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 121/196 (61%), Gaps = 13/196 (6%)

Query: 42  AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+L  GGK+IR  L+         +      V AA+E IH YSLIHDDLP+MDN  +
Sbjct: 35  AMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGYAVSAALEFIHTYSLIHDDLPAMDNDDL 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGL 156
           RRGKPT HI Y E TAI+AG+ LLT AFEII    +SP+ ++K      L+L+L  + G 
Sbjct: 95  RRGKPTSHIVYGEDTAILAGDALLTQAFEIIAVSDASPEKKVK------LILALAKSAGP 148

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+ GQM DIQ E  D +  ++  I + KTG L+ F   +  ++A A+   +E+L  + 
Sbjct: 149 EGMILGQMADIQGETKDLSLEELQFIHRNKTGELLKFPIYAACVIADAATEVEEQLMGYA 208

Query: 215 ENLGIIFQLADDLLDC 230
           E++G+ +Q+ DD+LD 
Sbjct: 209 EHIGLAYQIRDDILDV 224


>gi|241760634|ref|ZP_04758726.1| geranyltranstransferase [Neisseria flavescens SK114]
 gi|241318815|gb|EER55341.1| geranyltranstransferase [Neisseria flavescens SK114]
          Length = 298

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 7/209 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S  Q  H   L  A+RY  LGG K++R  LV   + L   N     +  AAIE +H YSL
Sbjct: 28  SESQVPHT--LHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+P+MDN  +RRGKPT H+QYDE TA++ G+ L T AF+++S P T L    +  ++
Sbjct: 86  VHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TGLSAERQLAML 144

Query: 148 LSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQ 204
            +L    G  GM GGQ +D+ +  + +++ ++  +  +KTGAL+  A   GA+     + 
Sbjct: 145 STLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGALSCPDLTP 204

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
            + + L  +   LG+ FQ+ DD+LDCE D
Sbjct: 205 AQIQTLDHYAAKLGLAFQVIDDVLDCEAD 233


>gi|269121046|ref|YP_003309223.1| polyprenyl synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614924|gb|ACZ09292.1| Polyprenyl synthetase [Sebaldella termitidis ATCC 33386]
          Length = 290

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 4/208 (1%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           + ++ +RL  ++ Y+++ GGK++R  L+   A +FN ++       AA+ECIH YSL+HD
Sbjct: 23  ELKYPERLAESMIYSVMNGGKRLRPVLMYMIADIFNQDYSRIEDTAAALECIHSYSLVHD 82

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MD+   RRGK T H ++DE TAI+AG+ LLTYAF +IS+ + +++++ +  ++  L
Sbjct: 83  DLPAMDDDTYRRGKLTTHKKFDEATAILAGDALLTYAFYVISASE-KIENSGKVNIIRIL 141

Query: 151 THNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           +   G+ GM+GGQ +D++ E   I    +  I   KTG L+  A E           +KE
Sbjct: 142 SDYSGINGMVGGQYVDMESENKEISFDTLKYIHSHKTGKLLKAAVELPLEALAIEGKQKE 201

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L  + E +GI FQ+ DDLLD E D  K
Sbjct: 202 VLLEYSELIGIAFQIKDDLLDIEGDFEK 229


>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. SG-1]
 gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. SG-1]
          Length = 295

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 122/199 (61%), Gaps = 6/199 (3%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +++  A+ Y+L  GGK+IR  L+         +    L   AA+E IH YSLIHDDLPSM
Sbjct: 32  EKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPSM 91

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNI 154
           DN  +RRGKPT H  + E TAI+AG+GLLTY+FE+++ +P    +  IR  L+  L  + 
Sbjct: 92  DNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLAGTPDVSAEKLIR--LVSLLAKSA 149

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +GM+GGQ  D++ E   +   ++  I K KTG L+ F+  + AI+A +++ +   L  
Sbjct: 150 GPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEE 209

Query: 213 FGENLGIIFQLADDLLDCE 231
           +  ++G+ FQ+ DD+LD E
Sbjct: 210 YAFHIGLAFQIQDDILDVE 228


>gi|225076775|ref|ZP_03719974.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens
           NRL30031/H210]
 gi|224951873|gb|EEG33082.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens
           NRL30031/H210]
          Length = 298

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 7/209 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S  Q  H   L  A+RY  LGG K++R  LV   + L   N     +  AAIE +H YSL
Sbjct: 28  SESQVPHT--LHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIEMVHVYSL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+P+MDN  +RRGKPT H+QYDE TA++ G+ L T AF+++S P T L    +  ++
Sbjct: 86  VHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TGLPAERQLAML 144

Query: 148 LSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQ 204
            +L    G  GM GGQ +D+ +  + +++ ++  +  +KTGAL+  A   GA+     + 
Sbjct: 145 STLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGALSCPDLTP 204

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
            + + L  +   LG+ FQ+ DD+LDCE D
Sbjct: 205 AQIQTLDHYAAKLGLAFQVIDDVLDCEAD 233


>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
 gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
          Length = 345

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 6/208 (2%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + +   + +RL  ++RY+LL GGK+IR  L      L   +  TA+    A+E IH  SL
Sbjct: 69  ASVPVHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGDMETAMPTACALEMIHTMSL 128

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLPSMDN   RRGKPT H  Y E  AI+AG+ LL++AFE I             +++
Sbjct: 129 IHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGASAEKVLRVI 188

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHA 202
           + +   +G +G++GGQ++DI  E      V +     I   KTGAL+  +  +GAI+  A
Sbjct: 189 VDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTLKYIHAHKTGALLEVSVTAGAILGGA 248

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
           S+ +  +L  + +N+G+ FQ+ DD+LDC
Sbjct: 249 SEEQIGKLERYAQNIGLAFQVVDDILDC 276


>gi|317047156|ref|YP_004114804.1| polyprenyl synthetase [Pantoea sp. At-9b]
 gi|316948773|gb|ADU68248.1| Polyprenyl synthetase [Pantoea sp. At-9b]
          Length = 299

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            +  L++A++Y ALLGGK++R FLV     +   +  +     AA+ECIH YSLIHDDLP
Sbjct: 28  QSSPLVNAMQYGALLGGKRLRPFLVYATGEMLKADPASLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+PT HI+Y E TAI+AG+ L T AF I++  P   +    R  ++  L  
Sbjct: 88  AMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMPGVSAEARITMISELAQ 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   ID  Q+  I + KTGAL+  A   GA+ A     E+ R 
Sbjct: 148 ASGVAGMCGGQALDLAAEGQSIDLAQLEQIHRHKTGALIRAAVRLGALAA----GEQGRA 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  +   +G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDVYANAIGLAFQVQDDILDVVGD 231


>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
 gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
           Hall]
          Length = 290

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 131/216 (60%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++  +  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKEYLDNKGNYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GA
Sbjct: 130 GEKALEACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+   +  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|329895161|ref|ZP_08270845.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
 gi|328922475|gb|EGG29816.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
          Length = 298

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/207 (41%), Positives = 124/207 (59%), Gaps = 13/207 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECA-------SLFNVNHLTALRVGAA-IECIHCYSLI 88
           +L  A+ Y+L +GGK++R  LV   A       +LF  N LT L + AA IE IH YSL+
Sbjct: 30  QLADAVAYSLKVGGKRLRPALVYSAAASLRADLTLFPPN-LTPLDLAAAAIESIHTYSLV 88

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRG+PTVH QYDE TAI+ G+ L  +AFE+++   T   D + + ++ 
Sbjct: 89  HDDLPAMDNDDLRRGQPTVHRQYDEATAILVGDALQAWAFELLTQIDTLPADKVVA-MVK 147

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNE 206
            L    G +GM+ GQ LD+Q     E+  ++ Q   +KTGAL+  A   GA   +A   E
Sbjct: 148 ELAQASGPKGMVLGQALDMQATGASESVDYLKQLHSLKTGALIRSALRLGAYCMNAGSKE 207

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
           +  L  +G+ +G+ FQ+ DD+LD   D
Sbjct: 208 RRVLSAYGDAIGLCFQVVDDILDVTTD 234


>gi|319638772|ref|ZP_07993531.1| geranyltranstransferase [Neisseria mucosa C102]
 gi|317400013|gb|EFV80675.1| geranyltranstransferase [Neisseria mucosa C102]
          Length = 298

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 5/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL      ++Q    L  A+RY  LGG K++R  LV   + L   N     +  AAIE
Sbjct: 19  ELLLAHFLPYESQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGEANQNAVEQAMAAIE 78

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H YSL+HDD+P+MDN  +RRGKPT H+QYDE TA++ G+ L T AF+++S P T L  
Sbjct: 79  MVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TGLPA 137

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI 198
             +  ++ +L    G  GM GGQ +D+ +  + +++ ++  +  +KTGAL+  A   GA+
Sbjct: 138 ERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQAELEQMHSLKTGALIRAAVALGAL 197

Query: 199 M-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                +  + + L  +   LG+ FQ+ DD+LDCE D
Sbjct: 198 SCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEAD 233


>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
 gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
          Length = 304

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 115/195 (58%), Gaps = 3/195 (1%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   +     N   ALR   A E IH YSL+HDDLP MDN  +
Sbjct: 44  AMRYAVLDGGKRLRPLLVLAASEAVGGNEAAALRAACAAELIHAYSLVHDDLPCMDNDVL 103

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+++ E  A++AG+ L   AFE+++    ++    ++ L   L    G QGM 
Sbjct: 104 RRGKPTVHVKFGEADALLAGDALQALAFELLAPEGDEIPAATQATLCRLLARAAGSQGMA 163

Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ +D+    I  +ETQ+  + ++KTGAL+  + E GA   + S      LR +G  +G
Sbjct: 164 GGQAIDLASVGIALNETQLREMHRLKTGALLQGSVEMGAACGNVSAAALAALRDYGAAIG 223

Query: 219 IIFQLADDLLDCEED 233
           + FQ+ DD+LD   D
Sbjct: 224 LAFQVVDDILDVTAD 238


>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
 gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
           Okra]
          Length = 290

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 132/216 (61%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 12  ELWLKGYLDNKGNYDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 71

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 72  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 129

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++     + GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GA
Sbjct: 130 GEKALKACYTIAKAAEVDGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+  A+  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 190 ILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGD 225


>gi|149191099|ref|ZP_01869358.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1]
 gi|148835027|gb|EDL52005.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1]
          Length = 294

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 129/231 (55%), Gaps = 14/231 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  LD    Q           RL+ A+RYALL GGK+ R FLV    
Sbjct: 4   ALKSYQQRNNEQLDAWLDHYPFQ---------EQRLIEAMRYALLLGGKRARPFLVYATG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F   +       AAIECIH YSLIHDDLP+MD+  +RRG+ T HIQ+DE TAI+ G+ 
Sbjct: 55  QIFGCTNEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQATCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
           L T AF I+S  +     +  R  ++  L H  G  GM  GQ LD++ E  + T  ++  
Sbjct: 115 LQTLAFTILSEGELASFANEQRITMVQKLAHASGAAGMCIGQALDLEAENRNVTLEELER 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLD 229
           I + KTGAL+  A + GA+ A     +   +L  + + +G+ FQ+ DD+LD
Sbjct: 175 IHRHKTGALIKCAVQLGALAAGDKGVQYLPQLENYADAIGLAFQVQDDILD 225


>gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Persephonella marina EX-H1]
 gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Persephonella marina EX-H1]
          Length = 290

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 10/199 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPS 94
           ++L  A+ Y+L  GGK++R  LV E A    +  +  +  +  A E IH YSLIHDDLP+
Sbjct: 28  EKLFDAMAYSLSAGGKRLRPILVLESAKAVGMEDIKDIVDIAVATEFIHTYSLIHDDLPA 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKPT HI Y E  AI+AG+GL +YAFE+IS  +T   D +   + + L+H  
Sbjct: 88  MDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAFELISKNRTVPPDKLLKVINI-LSHGT 146

Query: 155 GLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           G+ GM+GGQ  DI    ++ F D   +  I   KT   +   C+ G ++A A++ E+  L
Sbjct: 147 GIYGMVGGQAADILHEKENSFND---INFIHTHKTAKFIQSCCQMGGVLADATEEEEISL 203

Query: 211 RCFGENLGIIFQLADDLLD 229
           + +G  +G+ FQ+ DD+LD
Sbjct: 204 KNYGLYIGLAFQIQDDILD 222


>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
 gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
          Length = 297

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 116/212 (54%), Gaps = 7/212 (3%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L   +H  T     L  A+RYA L GGK++R  LV     +             A+ECIH
Sbjct: 25  LPAGTHAATP----LFDAMRYAALDGGKRVRPLLVFAAGDVSGATPEALSAAACAVECIH 80

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP MD+  +RRGKPT HI + E  A++AG+ L  +AFE+++ P   +    +
Sbjct: 81  AYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAGDALQAHAFELLAIPLPGVVPARQ 140

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
             ++ +L H  G +GM GGQ +D+      +D+T +  +  +KTGAL+  A   GA+   
Sbjct: 141 LAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALEYMHCLKTGALIQAAVRLGALAGS 200

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +E   L  +   +G+ FQ+ DD+LDCE D
Sbjct: 201 PDDDELAALDRYARRIGLAFQVIDDVLDCEAD 232


>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
 gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
          Length = 294

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 131/216 (60%), Gaps = 6/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L+     +  ++  +  A+ Y+L  GGK+IR  L     SL+  ++  A+ + AAIE
Sbjct: 16  ELWLKEYLDNKGNYDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIE 75

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+   +  LK+
Sbjct: 76  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF--EYSLKN 133

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++ +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+  +  +GA
Sbjct: 134 GEKALEACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGA 193

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+   +  + E L  +G+NLG+ FQ+ DD+LD E D
Sbjct: 194 ILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGD 229


>gi|238754213|ref|ZP_04615570.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
 gi|238707460|gb|EEP99820.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
          Length = 305

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 133/243 (54%), Gaps = 10/243 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN G P    +         ++ LL   + +   H+D L+ A+RY  LLGGK++R +LV 
Sbjct: 1   MNMGEPVLFNQQLAVYQQRANNALLSFIAPLPFNHSD-LVQAMRYGTLLGGKRLRPYLVY 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +F V   T     AA+ECIH YSL+HDDLP+MDN  +RRG+PT HI++ E  AI+A
Sbjct: 60  ATGQMFGVPLATLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILA 119

Query: 120 GNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDE 174
           G+ L T AF I++    P   L+D I   ++  L    G+ GM GGQ LD+  ++  I  
Sbjct: 120 GDALQTLAFSILADAPMPDVTLQDRI--SMLSELATASGVAGMCGGQALDLAAEERQISL 177

Query: 175 TQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T++  I + KTGAL+  A    A+ A  A      +L  +   +G+ FQ+ DD+LD   D
Sbjct: 178 TELEKIHRHKTGALIRTAVRMAALTAGTAGHLAMPQLDRYANAIGLAFQVQDDILDVIGD 237

Query: 234 LPK 236
             K
Sbjct: 238 TAK 240


>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
 gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
          Length = 297

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 4/204 (1%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q    + L  A+ Y+L  GGK+IR  L+         N    L V  AIE IH YSLIHD
Sbjct: 27  QLHGPETLKKAMAYSLEAGGKRIRPLLLLSTIQALGQNPSLGLPVACAIEMIHTYSLIHD 86

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLS 149
           DLPSMDN  +RRGKPT H  + E  AI+AG+GLLTYAF++I+     ++  ++R QL+  
Sbjct: 87  DLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIAEIHDERVPVDVRLQLIAE 146

Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G +GM+ GQ+ D++ E   +   ++  I + KTG ++ ++  +GA++  A   + 
Sbjct: 147 LAKAAGPEGMVAGQVADMEGEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADARQM 206

Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
             L  F  +LG+ FQ+ DD+LD E
Sbjct: 207 RELNEFAAHLGLAFQIRDDILDIE 230


>gi|148544405|ref|YP_001271775.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
 gi|184153768|ref|YP_001842109.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
 gi|227363170|ref|ZP_03847304.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
 gi|325682725|ref|ZP_08162241.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
 gi|148531439|gb|ABQ83438.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
 gi|183225112|dbj|BAG25629.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
 gi|227071776|gb|EEI10065.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
 gi|324977075|gb|EGC14026.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
          Length = 290

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 114/196 (58%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L  A+ Y+L+ GGK++R  L      +     +   LR  +A+E +H YSLIHDDLP+MD
Sbjct: 29  LRDAMNYSLMAGGKRLRPALTLATIEMLGGTLNDDLLRAASALELLHTYSLIHDDLPAMD 88

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H ++    A +AG+GLLT AF+ ++     L  NIRSQL L L    G 
Sbjct: 89  NDDLRRGKPTNHCKFGAGMATLAGDGLLTMAFQWVAD--NHLPANIRSQLTLELAKAAGP 146

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQ  DI+ E    T  Q+  + + KTG L+ +A  +G IM   S   K+ L  FG
Sbjct: 147 SGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFG 206

Query: 215 ENLGIIFQLADDLLDC 230
           EN G+ FQ+ DDL+D 
Sbjct: 207 ENYGLAFQIYDDLMDV 222


>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
 gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
          Length = 298

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 144/234 (61%), Gaps = 12/234 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           + + L +  +R++  L  L+L+ A    +QH    + ++RY+L +GGK+IR  L    A 
Sbjct: 3   IATYLNDQRQRVEDQLAALMLKPAGDF-SQH----IESMRYSLFVGGKRIRPILCLAGAE 57

Query: 64  LFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             +    T   AL V  A+ECIH YSLIHDDLP+MD+  +RRGKPT H  + E  AI+AG
Sbjct: 58  AVDSGEATRQRALSVACALECIHTYSLIHDDLPAMDDDDLRRGKPTNHTVFGEAAAILAG 117

Query: 121 NGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
           +GLLT+AF+++SS     + D  R +++ ++    G  GM+GGQ LD+  + + +    +
Sbjct: 118 DGLLTFAFDLLSSQASADINDAARIRIIQTIARAAGPLGMVGGQSLDMIYEGQQVGYEML 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             I + KTGAL+  +  SGA++A AS  ++  L+ +G+N+G+ FQ+ DDLLD E
Sbjct: 178 RTIHRSKTGALITASVLSGAMVAGASAEQETALKTYGDNIGLAFQIVDDLLDVE 231


>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
           thermopropionicum SI]
 gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
           thermopropionicum SI]
          Length = 294

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 118/198 (59%), Gaps = 4/198 (2%)

Query: 42  AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY++LGG K++R  LV   A     N    L    A+E IH YSL+HDDLP+MDN   
Sbjct: 36  AMRYSVLGGGKRLRPALVMAGAEAVGGNAADVLPAACAVELIHTYSLVHDDLPAMDNDDY 95

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+ T H  Y E  AI+AG+ LLT AFE++++      +NI  +++       G  G++
Sbjct: 96  RRGRLTNHKVYGEAAAILAGDALLTLAFELLANNDRARPENI-VRVIREAAAAAGTMGLI 154

Query: 161 GGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ++D     + IDE+ +  I + KTGAL  F+  +GA++A A + +   L  + E+LG
Sbjct: 155 GGQVVDTFSAGKEIDESTLEYIHRHKTGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLG 214

Query: 219 IIFQLADDLLDCEEDLPK 236
           + FQ+ DD+LD E D  K
Sbjct: 215 LAFQIKDDILDVEGDEKK 232


>gi|303252274|ref|ZP_07338440.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247789|ref|ZP_07529826.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307256855|ref|ZP_07538633.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307261287|ref|ZP_07542962.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|302648733|gb|EFL78923.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855732|gb|EFM87898.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306864589|gb|EFM96494.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306869018|gb|EFN00820.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 297

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 127/201 (63%), Gaps = 6/201 (2%)

Query: 35  HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           ++  L+ A+ YA LLGGK++R FL+     + +V         AA+E IH YSL+HDDLP
Sbjct: 30  YDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVPLEQLDHSAAAMEAIHAYSLVHDDLP 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT HI +DE TAI+AG+ L ++AFE+I   ++ L D+ + + + SLT  
Sbjct: 90  AMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAFELIVQDES-LTDSQKVRQIQSLTQA 148

Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209
            G +GM  GQ LD+  +D+ ++  ++ +I + KTGAL+  +   G  ++  SQN   K+ 
Sbjct: 149 AGARGMCLGQSLDLLAEDKAVNLAELELIHRNKTGALIIASVLMGFNLSVHSQNLAIKQP 208

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  + + +G+ FQ+ DD+LD 
Sbjct: 209 LERYAQAIGLAFQVQDDILDV 229


>gi|46143506|ref|ZP_00135080.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208283|ref|YP_001053508.1| geranyltranstransferase [Actinobacillus pleuropneumoniae L20]
 gi|303251195|ref|ZP_07337374.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307245667|ref|ZP_07527753.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250028|ref|ZP_07531996.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307252381|ref|ZP_07534278.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307254629|ref|ZP_07536460.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259080|ref|ZP_07540810.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|126097075|gb|ABN73903.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|302649929|gb|EFL80106.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306853369|gb|EFM85588.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857950|gb|EFM90038.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306860303|gb|EFM92319.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862424|gb|EFM94387.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866747|gb|EFM98605.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 297

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 126/201 (62%), Gaps = 6/201 (2%)

Query: 35  HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           ++  L+ A+ YA LLGGK++R FL+     + +V         AA+E IH YSL+HDDLP
Sbjct: 30  YDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLP 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT HI +DE TAI+AG+ L ++AFE+I+  ++ L D+ + + + SL   
Sbjct: 90  AMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDES-LTDSQKVRQIQSLAQA 148

Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209
            G +GM  GQ LD+  +D  ++  ++ +I + KTGAL+  +   G  ++  SQN   K+ 
Sbjct: 149 AGARGMCLGQSLDLLAEDTAVNLAELELIHRNKTGALIIASVLMGFNLSAHSQNLAIKQP 208

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  + + +G+ FQ+ DD+LD 
Sbjct: 209 LERYAQAIGLAFQVQDDILDV 229


>gi|585326|sp|Q08291|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
          Length = 297

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 118/198 (59%), Gaps = 4/198 (2%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+ Y+L  GGK+IR  L+         +    L V  AIE IH YSLIHDDLPSMD
Sbjct: 33  KLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIG 155
           N  +RRGKPT H  + E  AI+AG+GLLTYAF++I+     ++  ++R +L+  L    G
Sbjct: 93  NDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVRLRLIERLAKAAG 152

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +GM+ GQ  D++ E   +  +++  I + KTG ++ ++  +GA++  A   +   L  F
Sbjct: 153 PEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEF 212

Query: 214 GENLGIIFQLADDLLDCE 231
             +LG+ FQ+ DD+LD E
Sbjct: 213 AAHLGLAFQIRDDILDIE 230


>gi|114776787|ref|ZP_01451830.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1]
 gi|114552873|gb|EAU55304.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1]
          Length = 295

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 147/229 (64%), Gaps = 11/229 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA-S 63
           P+ L  ++  ++  L  +L   AS +     +RLLSA+RY+L+ GGK++R  L+ E   +
Sbjct: 4   PAFLATHATTVEQALCAMLDARASVV----PERLLSAMRYSLMAGGKRVRPALLLESYLA 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +H  A+    AIECIH YSLIHDDLP MD+  +RRGKPT H ++DE TA++A + L
Sbjct: 60  CGGKDHAAAMPAMLAIECIHTYSLIHDDLPCMDDDDLRRGKPTCHRRFDEATAVLAADAL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              AFE+++  + +L   +R +L+  L    G QGM+GGQM+D+Q E   +  + M++++
Sbjct: 120 QALAFELLA--EAELDPELRLELIRKLALAAGCQGMVGGQMMDMQAEHDSDIDMLMVERI 177

Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+C+ CE+GA++A A   E E    +G+ +G++FQ+ADD+LD
Sbjct: 178 HLHKTGALLCWCCEAGAMLAGAGTAELEASSRYGKAVGLLFQVADDILD 226


>gi|194466515|ref|ZP_03072502.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
 gi|194453551|gb|EDX42448.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
          Length = 290

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 8/196 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           L  A+ Y+L+ GGK++R  L      +    +N    LR  +A+E +H YSLIHDDLP+M
Sbjct: 29  LRDAMNYSLMAGGKRLRPALTLATIEMLGGTIND-DLLRAASALELLHTYSLIHDDLPAM 87

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRGKPT H ++    A +AG+GLLT AF+ ++     L  N+RSQL L L    G
Sbjct: 88  DNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVAD--NHLPANVRSQLTLELAKAAG 145

Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+ GQ  DI+ E    T  Q+  + + KTG L+ +A  +G IM   S   K+ L  F
Sbjct: 146 PSGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAF 205

Query: 214 GENLGIIFQLADDLLD 229
           GEN G+ FQ+ DDL+D
Sbjct: 206 GENYGLAFQIYDDLMD 221


>gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 298

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 5/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL+     + Q    L  A+RY  LGG K++R  LV   + L + +     +  AAIE
Sbjct: 19  ELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIE 78

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H YSL+HDD+P+MDN  +RRGKPT H++YDE TA++ G+ L T AF+++S P T L  
Sbjct: 79  MVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRP-TGLPA 137

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI 198
             +  ++ +L    G  GM GGQ +D+ +  + +++ Q+  +  +KTGAL+  A   GA+
Sbjct: 138 ERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAAVLGAL 197

Query: 199 MAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
                 ++  R L  +   LG+ FQ+ DD+LDCE D
Sbjct: 198 ACPDLDSDDVRTLDNYAAKLGLAFQVIDDVLDCEAD 233


>gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
          Length = 297

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 122/202 (60%), Gaps = 6/202 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +N  L  A++Y LL GGK++R FLV     +            AAIE IH YSLIHDDLP
Sbjct: 30  YNAPLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLP 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN  +RRG+PT HI +DE TAI+AG+ L  +AFEI++   + L    + QL+  L   
Sbjct: 90  AMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEILTEAPS-LSAEQKLQLVKVLAQA 148

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209
            G+QGM  GQ LD+  E   ++  ++ +I + KTGAL+  A + G I +   +N+  +++
Sbjct: 149 SGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQQ 208

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
           L  + + +G+ FQ+ DD+LD E
Sbjct: 209 LERYSQAIGLAFQVQDDILDIE 230


>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
          Length = 295

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 128/233 (54%), Gaps = 10/233 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L    K ++  LD +L             RL SA+R++L  GGK++R  L    A 
Sbjct: 4   LETYLARRQKAVNEALDRILADCVP------GGRLFSAMRHSLKAGGKRLRPILCMAAAE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   AL  G AIE IH YSL+HDDLP++DN  +RRG+P  H  +DE TAI AG+ L
Sbjct: 58  AVGGTWEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180
            T AFE++SS +       R   ++ L +   G  GM+ GQM DI  Q   +   Q+  +
Sbjct: 118 HTLAFEVLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKEL 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++KTGAL+  +  +GA+   A+  +  +L  + EN+G+ FQ+ADDLL+ E D
Sbjct: 178 HRLKTGALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGD 230


>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
 gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
          Length = 293

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 7/202 (3%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ++L +A+RY+L  GGK+IR  L    A L  +++ LT     AA+E IH YSLIHDDLP+
Sbjct: 29  NQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDISSLTDAS-AAALESIHAYSLIHDDLPA 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRGKPT HIQ+DE TAI+AG+ L T+AFE++S+P T  +  +  +L+  L    
Sbjct: 88  MDNDELRRGKPTCHIQFDEATAILAGDALQTFAFELLSNP-TSAQPELAIKLIQELVVAS 146

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211
           G  GM+ GQM+D+  E   I   ++  +   KTGAL+  +   GA+     + E+  +L 
Sbjct: 147 GRNGMITGQMIDLSSENKNISLAELEQMHVHKTGALIKASVRMGALSTGQVKPEQLAKLD 206

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +   +G+ FQ+ DD++D   D
Sbjct: 207 AYAHAIGLAFQVQDDIIDLTSD 228


>gi|329121102|ref|ZP_08249733.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
 gi|327471264|gb|EGF16718.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
          Length = 284

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 125/198 (63%), Gaps = 5/198 (2%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++ Y+LL  GK+IR  L      +F V++L  L + A++EC+H YSLIHDDLP MDN
Sbjct: 31  LFDSMNYSLLSNGKRIRGCLFLFILEMFKVDYLQYLDIAASVECVHTYSLIHDDLPCMDN 90

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG  T H +Y E  A+ AG+ LLT+AF++IS  K   +D  R +L+  L+   G +
Sbjct: 91  DDYRRGILTNHKKYGEGVALQAGDALLTFAFQLISQAKFSAED--RCKLIEILSIAAGAE 148

Query: 158 GMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+ GQ+ DIQ  ++ I+  ++ ++ K KTG ++    +    + H S ++ ++LR F +
Sbjct: 149 GMVAGQVHDIQIENKSIELDELKLLDKFKTGRMIKTPVDMAIQLTHMSISDADQLRKFAK 208

Query: 216 NLGIIFQLADDLLDCEED 233
           +LG++FQ+ DD+LD +ED
Sbjct: 209 HLGLLFQITDDILDYKED 226


>gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
 gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
          Length = 293

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 134/224 (59%), Gaps = 8/224 (3%)

Query: 16  IDTILDDLLLQTASHMQTQ--HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           I+T+ ++L      +M+ +  +N R+  A++Y+L  GGK+IR  L      L+  +    
Sbjct: 7   IETLREELNKYLYDYMEGKGSYNKRVYEAMQYSLDAGGKRIRPLLFLLTYKLYKTDCNEV 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  A++AG+GLL  A  ++ 
Sbjct: 67  MDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAVLAGDGLLNEAMSLMF 126

Query: 133 SPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALM 189
                 KDN IR+  ++S   + G  GM+GGQ +DI  ++  I   Q++ +   KTGAL+
Sbjct: 127 RHCIGKKDNAIRACSIIS--ESAGADGMVGGQTVDILSENTKIPIDQLYYMHSKKTGALI 184

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  S A+ A AS+ E ++L  +GE LG+ FQ+ DD+LD   D
Sbjct: 185 KGSIISAAVYAGASKAEIDKLSYYGEKLGLAFQIKDDILDLTGD 228


>gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 298

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 138/224 (61%), Gaps = 14/224 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           +K++D+ L+  ++       +Q+ D L+ A+RY+L  GGK++R  L+     +F+     
Sbjct: 13  AKKVDSWLEQYVIS-----NSQYIDGLVEAMRYSLFAGGKRLRPALIYSSFGIFDGYFDK 67

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                AA+E +H YSLIHDDLP+MD+  +RRGKPT H+ Y E  AI+AG+ LLT AFEI+
Sbjct: 68  VTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILAGDALLTKAFEIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           +S  + L  ++   +ML   + +    G +GM+GGQ  D++ E  F ++  V  I   KT
Sbjct: 128 TS--SSLNPDVDPVMMLEAANKLAIATGEKGMVGGQYADLKAEGGFFNDGTVSFIHLNKT 185

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AL+ + CE GAI+ +A+  EK+ +  FG+ +G+ FQ+ DD+LD
Sbjct: 186 AALISYCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILD 229


>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
 gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
          Length = 292

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 130/228 (57%), Gaps = 8/228 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     I++ +D  L   A+     H + +L ++R    GGK++R  LV     LF+ 
Sbjct: 6   KLRTYQSEIESAVDQYLPAEATRPSRIH-EAMLYSMR---AGGKRLRPVLVLASKELFD- 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           + L A+    A+EC+H YSLIHDDLPS+D+G +RRGKPT H Q+DE TA++AG+ LL YA
Sbjct: 61  SELDAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDALLAYA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F++++       D + + L+  L    G + ++GGQM DI  E   + E  +  I   KT
Sbjct: 121 FQLLARHFANAPD-VCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFIHLNKT 179

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            AL+      G I+  A+  + + LR +G  +GI FQ+ DD+LD   D
Sbjct: 180 SALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSD 227


>gi|119502847|ref|ZP_01624932.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
 gi|119461193|gb|EAW42283.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
          Length = 280

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 5/202 (2%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + RL +A++Y L   GKK+R+ LV     +        A     AIE +H YSL+HDDLP
Sbjct: 15  DPRLAAALQYVLENSGKKLRARLVMASYHMLCEGADDAAASAATAIEWLHTYSLVHDDLP 74

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPTVH  YDE TAI+ G+GL   AF +IS  + +L    R +L+  + + 
Sbjct: 75  AMDDDALRRGKPTVHTVYDEATAILIGDGLQAAAFSLISEDE-RLASGTRLKLITLIANA 133

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +G  GM+GGQ LD+  +    T  Q+ +I + KTGAL   A  SGA+ A+A++ + +RL 
Sbjct: 134 VGFNGMVGGQALDMAAQGKASTFEQLRLIHEQKTGALFRAAVLSGAVCANATEQDIQRLD 193

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            F   +G+ FQ+ADD+LD  E+
Sbjct: 194 QFASTIGLAFQVADDILDVTEN 215


>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 295

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 123/228 (53%), Gaps = 14/228 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L   ++ ID  LD  L Q + +    H      A+RY++  GGK++R  L    A     
Sbjct: 6   LAAKAETIDAALDRYLRQASENPPVIHE-----AMRYSVFAGGKRLRPALTLAAAQAVGA 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L    AIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  A++AG+ L   A
Sbjct: 61  PERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQ 181
           FE+++  +      + ++ +L++   +    G  G++GGQ LD+      + E ++  + 
Sbjct: 121 FEVLAGCRRD--GGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVH 178

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + KTGAL   A  +GA++  AS  + ERL  F E+ G+ FQ+ DD+LD
Sbjct: 179 RAKTGALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILD 226


>gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755]
 gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755]
          Length = 297

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 137/237 (57%), Gaps = 15/237 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN  L ++L +  +RI+  L + L Q  ++     N  L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MNYDLFAELSQYQQRINHFLSEQLSQYPAY-----NTPLIDAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V          A+E IH YSL+HDDLP+MDN  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175
           G+ L ++AFE+++   +   +   +Q M  L  + G +GM  GQ LD+Q E     +DE 
Sbjct: 116 GDALQSFAFELLAFDPSLTAEQKVAQ-MQWLAKSAGAKGMCLGQSLDLQSEHKAIALDEL 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDC 230
           +   I + KTGAL+  +   G  ++  +Q+   K++L  + + +G+ FQ+ DD+LD 
Sbjct: 175 E--RIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAKAIGLAFQVQDDILDV 229


>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
 gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
          Length = 303

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 16/234 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           LQ  ++ I+ +LD+ L   A  +      RL  A+RYA+LGG K+IR+ LV        V
Sbjct: 12  LQGRAQHIEAVLDECL-PAADALPA----RLHEAMRYAVLGGGKRIRAALVYAAGQACPV 66

Query: 68  N------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           N        +  R  AA+E IH YSLIHDDLP MD+  +RRG+PT H+Q+DE TA++AG+
Sbjct: 67  NGSAVAIQASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGD 126

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
            L   AFE+++     +   +  Q   +L    G  GM GGQ +D+    + +   ++  
Sbjct: 127 ALQPLAFELLA--DMPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSRDELQT 184

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  MKTGA++  +   G I++ AS + ++ L  + + +G+ FQ+ DD+LD   D
Sbjct: 185 MHSMKTGAMLACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTAD 238


>gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
 gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
          Length = 293

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 134/234 (57%), Gaps = 11/234 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   ++ N+ +I+  +  L+ Q  +         L  ++ Y+L  GGK+IR   V 
Sbjct: 1   MNEPLKYFIESNTPQIEETMFSLVEQIDAPAD------LKESMLYSLKAGGKRIRPLFVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L+  N    L VG+ IE IH YSLIHDDLPSMDN   RRGKPT H  Y E  A +A
Sbjct: 55  AVLELYRENLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ L T AF I++  +  +    R +L+  L+   G +GM+GGQ+LD++ E   ++  ++
Sbjct: 115 GDALNTLAFGILA--RMDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAEL 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +   KTGAL+ F+ E+GA++A  S  ++  L+ +  ++G+ FQ+ DD+LD E
Sbjct: 173 EQVHVNKTGALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIE 226


>gi|291616530|ref|YP_003519272.1| IspA [Pantoea ananatis LMG 20103]
 gi|291151560|gb|ADD76144.1| IspA [Pantoea ananatis LMG 20103]
          Length = 299

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 117/200 (58%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A++Y ALLGGK++R FLV     + + +  +     AA+ECIH YSLIHDDLP+MD+
Sbjct: 32  LVNAMQYGALLGGKRLRPFLVYATGEMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDD 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI+Y E TAI+AG+ L T AF I++  P   +    R  ++  L    G+
Sbjct: 92  DALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMPGVSAEYRLAMLSELAKASGV 151

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213
            GM GGQ LD+  E   +   Q+  I + KTGAL+  A   GA  A     E    L  +
Sbjct: 152 AGMCGGQALDLAAEGQSVGLAQLEQIHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRY 211

Query: 214 GENLGIIFQLADDLLDCEED 233
            + +G+ FQ+ DD+LD   D
Sbjct: 212 ADAIGLAFQVQDDILDVTGD 231


>gi|327392961|dbj|BAK10383.1| geranyltranstransferase IspA [Pantoea ananatis AJ13355]
          Length = 299

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 117/200 (58%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A++Y ALLGGK++R FLV     + + +  +     AA+ECIH YSLIHDDLP+MD+
Sbjct: 32  LVNAMQYGALLGGKRLRPFLVYATGEMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDD 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI+Y E TAI+AG+ L T AF I++  P   +    R  ++  L    G+
Sbjct: 92  DALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQPMPGVSAEYRLAMLSELAKASGV 151

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213
            GM GGQ LD+  E   +   Q+  I + KTGAL+  A   GA  A     E    L  +
Sbjct: 152 AGMCGGQALDLAAEGQSVGLAQLEQIHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRY 211

Query: 214 GENLGIIFQLADDLLDCEED 233
            + +G+ FQ+ DD+LD   D
Sbjct: 212 ADAIGLAFQVQDDILDVTGD 231


>gi|255065407|ref|ZP_05317262.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
 gi|255050232|gb|EET45696.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
          Length = 298

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 125/216 (57%), Gaps = 5/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL+     + Q    L  A+RY  LGG K++R  LV   + L + +     +  AAIE
Sbjct: 19  ELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIE 78

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H YSL+HDD+P+MDN  +RRGKPT H++YDE TA++ G+ L T AF+++S P T L  
Sbjct: 79  MVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRP-TGLPA 137

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI 198
             +  ++ +L    G  GM GGQ +D+ +  + +++ Q+  +  +KTG L+  A   GA+
Sbjct: 138 ERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGTLIRAAVVLGAL 197

Query: 199 M-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                  N+   L  +   LG+ FQ+ DD+LDCE D
Sbjct: 198 ACPDLDSNDVRTLDNYAAKLGLAFQVIDDVLDCEAD 233


>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
 gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
          Length = 349

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 9/204 (4%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +RL  ++RY+LL GGK+IR  L      L       A+    A+E IH  SLIHDDLP
Sbjct: 78  YPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMDVAMPTACALEMIHTMSLIHDDLP 137

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLT 151
           SMDN   RRGKPT H  Y E  AI+AG+ LL++AFE I   +PK+   +    ++++ + 
Sbjct: 138 SMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETPKSVPAERTL-RVIVDVG 196

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNE 206
             +G +G++GGQ++DI  E  +  +V +     I   KTGAL+  +  +GAI+A A + +
Sbjct: 197 KCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHAHKTGALLEVSVTAGAILAGAKEED 256

Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
            ERL  + + +G+ FQ+ DD+LDC
Sbjct: 257 VERLGKYAQLIGLAFQVVDDILDC 280


>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
           16646]
 gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
           16646]
          Length = 296

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 14/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L+E  K I+  LD  + ++  + Q  H      A+RY+   GGK+IR  L  + A LF 
Sbjct: 7   ELKEAGKIIEKALDFYIPKSNEYPQKIHE-----AMRYSTFNGGKRIRPVLTMKAAELFG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +     +     IE IH YSLIHDDLP MDN   RRGKPT H  + +  A++AG+ LLT 
Sbjct: 62  LQGEKVIPTACGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDALLTL 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMI 180
           AF  I   K    + I  Q ++ +   I    G  GM+GGQ +DI  Q   IDE  +F +
Sbjct: 122 AFNTIV--KNAQIEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLFYM 179

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTG L+  +  +GA +A A  ++  +L  FGE +G+IFQ+ DDLLD
Sbjct: 180 DYHKTGCLIQASLWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLD 228


>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Oceanobacter sp. RED65]
 gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Oceanobacter sp. RED65]
          Length = 294

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 122/201 (60%), Gaps = 7/201 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+ Y+LL GGK++R  +V       + +   A +   A+E IH YSL+HDDLP+MD
Sbjct: 31  RLKDAMTYSLLNGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMIHAYSLVHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT HI +DE TAI+AG+ L T AF+++  P   +    + +++ +L H  GL
Sbjct: 91  DDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQQLRMVQTLAHASGL 150

Query: 157 QGMLGGQMLDIQDEFID-ETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212
            GM GGQ LD+  E +D +  +  +Q M   KTGAL+  + + G + A+AS+ +   L  
Sbjct: 151 AGMAGGQSLDL--EAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCANASEQQLSYLSV 208

Query: 213 FGENLGIIFQLADDLLDCEED 233
           + + +G+ FQ+ DD+LD   D
Sbjct: 209 YAQAIGLAFQVQDDILDVISD 229


>gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
 gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
          Length = 298

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 5/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL+     + Q    L  A+RY  LGG K++R  LV   + L + +     +  AAIE
Sbjct: 19  ELLLERFLPSENQVPHTLHEAMRYVTLGGGKRLRPLLVLAASELGDADQNAVEQAMAAIE 78

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H YSL+HDD+P+MDN  +RRGKPT H++YDE TA++ G+ L T AF+++S P T L  
Sbjct: 79  MVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVLSRP-TGLPA 137

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAI 198
             +  ++ +L    G  GM GGQ +D+ +  + +++ Q+  +  +KTGAL+  A   GA+
Sbjct: 138 EHQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAVVLGAL 197

Query: 199 MAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
                 ++  R L  +   LG+ FQ+ DD+LDCE D
Sbjct: 198 ACPDLDSDDVRTLDDYAAKLGLAFQVIDDVLDCEAD 233


>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
 gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
          Length = 299

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 114/199 (57%), Gaps = 6/199 (3%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL  A+RY+LL GGK++R  L  E A LF       L   AAIE IH YSLIHDDLP+M
Sbjct: 33  ERLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDDLPAM 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRG+PT H ++ E  AI+AG+     A  +I+  +    +  R  ++  L  + G
Sbjct: 93  DNDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQEGTCEQ-RLGVVQELASSTG 151

Query: 156 LQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           + GM+GGQ+LD+         D   +FMI + KTGAL+  +   GAI+A A +   E + 
Sbjct: 152 VNGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARVGAILAGAGEEGLEAIS 211

Query: 212 CFGENLGIIFQLADDLLDC 230
            +   LG+ FQ+ DD+LD 
Sbjct: 212 RYATELGLCFQIVDDVLDA 230


>gi|296283988|ref|ZP_06861986.1| geranyltranstransferase [Citromicrobium bathyomarinum JL354]
          Length = 308

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 124/201 (61%), Gaps = 3/201 (1%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+R+A +GG K++R  L+   A++  V+   A+  G A+E IH YSLIHDDLP MD+
Sbjct: 46  LVEAMRHAAIGGGKRVRPLLLVATATMLGVSREAAVLAGTAVESIHVYSLIHDDLPCMDD 105

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH  +DE TA++AG+ L   AF+I++         I+++L+  L    G+ 
Sbjct: 106 DDMRRGKPTVHKAFDEATAVLAGDALHALAFDILTDSSVSSDPFIQAELVRCLAQASGMS 165

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM GGQ +D+  +    D   +  +Q++KTGAL+  + E GAI+A    + +  L  +  
Sbjct: 166 GMAGGQAMDMAADSATYDLPTITRLQQLKTGALLTASVEMGAILARVPHDARGHLIAYAR 225

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           ++G+ FQ+ADDLLD E D  K
Sbjct: 226 DIGLAFQIADDLLDHEGDEDK 246


>gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601]
 gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601]
          Length = 293

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 120/205 (58%), Gaps = 7/205 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RY+L  GGK+IR  L+               +  AA+E IH YSLIHDDLP+MDN
Sbjct: 32  LKKAMRYSLEAGGKRIRPILLFATLISLRTELEKGKKTAAALEMIHTYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  + + TAI+AG+GLLT AF ++S  +  L    R +L+     + G +
Sbjct: 92  DDYRRGKLTNHKVFGDATAILAGDGLLTLAFSLLSEEEA-LPAESRVKLIQLFAEHAGPE 150

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+ GQ  DI  +D  +   ++  I + KTGAL+  A  +GAI+A+A     E+L  + +
Sbjct: 151 GMVAGQQADIEAEDRSVTLEELAAIHRKKTGALLKSAVLAGAIIANADAETYEKLNIYAD 210

Query: 216 NLGIIFQLADDLLDC---EEDLPKK 237
           N+G+ FQ+ADD+LD    E+ L KK
Sbjct: 211 NIGVAFQIADDILDVVGDEQKLGKK 235


>gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202]
 gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202]
          Length = 299

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 33  TQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           + ++  L+ A+ YA LLGGK++R FL+     +  V+        AA+E IH YSL+HDD
Sbjct: 30  SAYHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVSLEALDHSAAAMESIHAYSLVHDD 89

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRGKPT HI +DE TAI+AG+ L T+AFE+I+     L D  + + + SL 
Sbjct: 90  LPAMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAFELIAKDPF-LTDLQKVKQIQSLA 148

Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM  GQ LD+  +++ I  +++ +I + KTGAL+  +   G  ++  +++EK +
Sbjct: 149 QAAGARGMCLGQSLDLISENKAISLSELELIHRNKTGALIVASVLMGFNLSDYARDEKIK 208

Query: 210 --LRCFGENLGIIFQLADDLLDCEEDLPK 236
             L C+ + +G+ FQ+ DD+LD   D  K
Sbjct: 209 NALECYAKAIGLAFQVQDDILDVIGDTDK 237


>gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
 gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
          Length = 289

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 11/232 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + ++ Q  ++ ++  L D+ L   S +       L SA      GGK+ R  L      L
Sbjct: 11  IAARTQAVNQFVEKYLSDMELPAGSAISELRKSMLYSATN----GGKRFRPVLSLLVGEL 66

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F       L   AA+E IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL
Sbjct: 67  FGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHKVFGEDFALLAGDALL 126

Query: 125 TYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
           T AF +I+       DN  +   L   L+   G++GM+GGQ +D++  D+ +   ++  +
Sbjct: 127 TEAFMLIAE---NYGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAGDKQMSLEELTHL 183

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++KTGAL+  A E  A++A A   E E L+ FGE LG+ FQ+ADD+LD  E
Sbjct: 184 HRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLAFQVADDVLDHGE 235


>gi|308185891|ref|YP_003930022.1| geranyltranstransferase [Pantoea vagans C9-1]
 gi|308056401|gb|ADO08573.1| geranyltranstransferase [Pantoea vagans C9-1]
          Length = 264

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/192 (43%), Positives = 112/192 (58%), Gaps = 4/192 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           ALLGGK++R FLV     + + N  +     AA+ECIH YSLIHDDLP+MDN  +RRG+P
Sbjct: 5   ALLGGKRLRPFLVYATGEMLHANPASLDVPAAAVECIHAYSLIHDDLPAMDNDALRRGQP 64

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           T HI+Y E TAI+AG+ L T AF I++      +    R  ++  L    G+ GM GGQ 
Sbjct: 65  TCHIKYGEDTAILAGDALQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMCGGQA 124

Query: 165 LDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIF 221
           LD+  E   ID  Q+  I + KTGAL+  A   GA+ A  +  E    L  + E +G+ F
Sbjct: 125 LDLAAEGKSIDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAIGLAF 184

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 185 QVQDDILDVIGD 196


>gi|284006403|emb|CBA71639.1| geranyltranstransferase [Arsenophonus nasoniae]
          Length = 302

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L++A++Y ALLGGK++R FLV     + NV         AA+ECIH +SLIHDDLP+MD
Sbjct: 33  QLVAAMKYGALLGGKRLRPFLVYAIGDMLNVAVENLDVPAAAVECIHAFSLIHDDLPAMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG 155
           N  +RRG+PT HI + E  AI+AG+ L T AF+I+S S    + D  R  ++  L    G
Sbjct: 93  NDNLRRGQPTCHISFGEAHAILAGDALQTLAFDILSRSAMPDVSDTYRLAMIAELATATG 152

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRC 212
             GM GGQ LD++ E   ID T +  I   KTGAL+  A    A+ A    N+    L  
Sbjct: 153 AAGMCGGQALDMESEGQQIDFTTLETIHHHKTGALIRAAIRMSALTAGNQGNKLLPLLDN 212

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +   +G++FQ+ DD+LD   D
Sbjct: 213 YANAIGLLFQVHDDILDVTGD 233


>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
          Length = 296

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 3/198 (1%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +L A RY+L  GGK++R  L    A +   +   A+    A+E IH YSLIHDDLP+MDN
Sbjct: 34  VLEAARYSLFAGGKRLRPILCLAAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDN 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGKPT H  + E  A++AG+ LLT AF+ +S     +       ++ +L    G +
Sbjct: 94  DDFRRGKPTNHKVFGEAIAVLAGDALLTEAFDFVSKMDGDIPPRKILAVVATLVRASGYR 153

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ++D+  ++  +D   V  +   KTGAL+  + E GA++   S  +   L+ +G 
Sbjct: 154 GMIGGQVIDLECENRTVDLATVEYMHIHKTGALLSASLEVGALLGGGSDAQVSSLKRYGH 213

Query: 216 NLGIIFQLADDLLDCEED 233
           +LG+ FQ+ DDLLD E D
Sbjct: 214 HLGLAFQITDDLLDVEGD 231


>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
 gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
          Length = 302

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 12/229 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L   LQE    ++T LD  L+ T           +  A+RY+LL GGK++R  L      
Sbjct: 13  LAQYLQEQKTIVETALDQSLVIT-------EPVTIYEAMRYSLLAGGKRLRPILCLAACE 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +       A+    A+E IH  SLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+ L
Sbjct: 66  MLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDAL 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MI 180
           L+YAFE ++       + +  Q+++ L   +G +G++GGQ++D++ E   +  V     I
Sbjct: 126 LSYAFEYVARTPDVPAERLL-QVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLNFI 184

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+     +GAI+A A   E + L  + +N+G+ FQ+ DD+LD
Sbjct: 185 HTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILD 233


>gi|262039631|ref|ZP_06012924.1| geranyltranstransferase [Leptotrichia goodfellowii F0264]
 gi|261746346|gb|EEY33892.1| geranyltranstransferase [Leptotrichia goodfellowii F0264]
          Length = 271

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 6/204 (2%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           + ++ + L  A++YA++ GGK+IR  L+     LF   +     +  A+E IHCYSL+HD
Sbjct: 4   KYKYPEELSEAMKYAVMNGGKRIRPILMYMICDLFGKKYDKIEDMATALEFIHCYSLVHD 63

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MDN   RRGK T H++Y E TAI+ G+ LLT AF +I+ S KT   D  +++++  
Sbjct: 64  DLPAMDNDMYRRGKLTTHVKYGESTAILVGDVLLTEAFNVIAESEKTD--DTAKAKIIAK 121

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+   G  GM+GGQ +DI+ E   +    +  I   KTG L+  A E   I     ++++
Sbjct: 122 LSEYAGFYGMIGGQFMDIKSEHTRVSYDTLKYIHANKTGKLITAAIELPLIALDIEESKR 181

Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
           E+L  + E +G  FQ+ DD+LD E
Sbjct: 182 EKLVGYSELIGTAFQIKDDILDIE 205


>gi|296133204|ref|YP_003640451.1| Polyprenyl synthetase [Thermincola sp. JR]
 gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
          Length = 299

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 12/231 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KR   I+++ L Q     + ++ + +  ++RY++L GGK++R  LV   A     +    
Sbjct: 11  KRKVNIIEEALSQYLPG-EDEYPETIHQSMRYSMLAGGKRLRPVLVLAAAEAVGGDVKKV 69

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    AIE IH YSLIHDDLP+MD+   RRGKPT H+ Y E  AI+AG+ LLT AFE++S
Sbjct: 70  IPAACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHVVYGEAIAILAGDALLTLAFEVLS 129

Query: 133 SPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFID---ETQVFMIQKMKT 185
           S   +    I  Q +L +   I    G +G++GGQ++DI  E +D   ET  + I   KT
Sbjct: 130 SLVEE--PGIDPQKVLRVIKEISLAAGSRGLIGGQVVDIGSENLDISAETLKY-IHIHKT 186

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GAL   A ++GAI++ AS+ +   L  +   LG+ FQ+ DD+LD E D  K
Sbjct: 187 GALFKAALKTGAILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTEK 237


>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
 gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
          Length = 324

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 14/201 (6%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   A          LR G A+E IH YSL+HDD+P MDN  +
Sbjct: 63  AMRYAVLDGGKRLRPLLVWAAAEAVGGQAAATLRAGCAVELIHAYSLVHDDMPCMDNDTM 122

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+Q+ E +A++AG+ L   AFE++      +  +++++L   L    G  GM 
Sbjct: 123 RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQARLCRLLGAAAGSHGMA 182

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC------ 212
           GGQ +D+    + + ETQ+  + ++KTGAL+      G+++  A+ N +   R       
Sbjct: 183 GGQAIDLASVGKQLSETQLREMHRLKTGALLL-----GSVLMGAACNAQTDARALAALTD 237

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G+ LG+ FQ+ DD+LD   D
Sbjct: 238 YGQALGVAFQVVDDILDVVAD 258


>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
 gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
          Length = 296

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 129/215 (60%), Gaps = 14/215 (6%)

Query: 29  SHMQTQHND------RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIE 80
           S M+ Q ND       L  A++Y LL GGK+IR FLV     +   + L AL    AAIE
Sbjct: 17  SFMENQFNDINTFGSPLADAMKYGLLLGGKRIRPFLVYATGDMLGAD-LNALDYAAAAIE 75

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT HI +D  TAI+AG+ L T+AFEII+   T L  
Sbjct: 76  SIHAYSLIHDDLPAMDNDELRRGKPTCHIAFDHATAILAGDALQTFAFEIITK-STALCA 134

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198
             + +L+  L+   G++GM  GQ LD+  + + +   ++ +I + KTGAL+  A   G I
Sbjct: 135 EQKLKLVQELSRAAGVRGMCLGQSLDLLAEQKKVTLAELELIHRNKTGALLTAALMMGFI 194

Query: 199 MA--HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +  +A+     RL+ + + +G+ FQ+ DD+LD E
Sbjct: 195 CSPHYANHALACRLKQYADAIGLAFQVRDDILDIE 229


>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
 gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
          Length = 297

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 4/194 (2%)

Query: 42  AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+L  GGK+IR  L+      F       L V  AIE IH YSLIHDDLPSMDN  +
Sbjct: 37  AMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDL 96

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRGKPT H  + E  AI+AG+GLLTYAF++I+     ++    + +L+  L    G +GM
Sbjct: 97  RRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEMSDARIVPATKIRLIEELAKAAGPEGM 156

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQ+ DI+ E   +   Q+  I + KTG ++ ++  +GA++A A   +   L  F  +L
Sbjct: 157 VAGQVADIEGEGKQLSLEQLEYIHRHKTGKMLQYSVLAGALLADAKDEQLHHLHTFASHL 216

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ DD+LD E
Sbjct: 217 GLAFQIRDDILDIE 230


>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
 gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
          Length = 324

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 14/201 (6%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   A          LR G A+E IH YSL+HDD+P MDN  +
Sbjct: 63  AMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTM 122

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+Q+ E +A++AG+ L   AFE++      +  +++++L   L    G QGM 
Sbjct: 123 RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMA 182

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC------ 212
           GGQ +D+    + + E Q+  + ++KTGAL+      G+++  A+ N +   R       
Sbjct: 183 GGQAIDLASVGKHLSEAQLREMHRLKTGALLL-----GSVLMGAACNAQTDARALAALTD 237

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G+ LG+ FQ+ DD+LD   D
Sbjct: 238 YGQALGVAFQVVDDILDVVAD 258


>gi|119383153|ref|YP_914209.1| polyprenyl synthetase [Paracoccus denitrificans PD1222]
 gi|119372920|gb|ABL68513.1| farnesyl-diphosphate synthase [Paracoccus denitrificans PD1222]
          Length = 287

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/206 (42%), Positives = 128/206 (62%), Gaps = 11/206 (5%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L  A+RYA +GGK+IR+FLV E A LF +    +L V AA+E +H YSL+HDDLPSMD+ 
Sbjct: 28  LTDAMRYACIGGKRIRAFLVMESARLFGLRDRESLPVAAAVEALHAYSLVHDDLPSMDDD 87

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG PTVH+++ E TAI+AG+ L + AF +++  +    + IR  L+   +  +G +G
Sbjct: 88  DLRRGLPTVHVRWSEATAILAGDALQSLAFGLLTDAQIGAPE-IRLALVSGFSEAVGGRG 146

Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LDI  E     +D   +  +Q+ KTGAL+ F+  +GA+MA     +   L  + 
Sbjct: 147 MVWGQALDIAAETAVEPLDLMAIKRLQQAKTGALIQFSATAGAVMAG---QDTGPLAEYA 203

Query: 215 ENLGIIFQLADDLLDC---EEDLPKK 237
            NLG+ FQ+ DD+LD    E D  K+
Sbjct: 204 RNLGLAFQIHDDVLDVTGNEADTGKR 229


>gi|84514696|ref|ZP_01002060.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
           SKA53]
 gi|84511747|gb|EAQ08200.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
           SKA53]
          Length = 294

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/226 (44%), Positives = 129/226 (57%), Gaps = 18/226 (7%)

Query: 20  LDDLLLQTASHMQTQHNDRLLS--------AIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           L D L Q A+ + TQ  +  LS        A+ YA  GGK +R+FL  E A L  V    
Sbjct: 10  LPDALAQ-AARIATQMIEAQLSDLSGPVPDAMIYAARGGKALRAFLAIETARLHGVPPQV 68

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A    AAIECIH YSLIHDDLP MD+  +RRG+PTVH ++DE TA++AG+ L   AFE++
Sbjct: 69  AAHAAAAIECIHAYSLIHDDLPCMDDDDLRRGQPTVHKRWDEATAVLAGDALQALAFELL 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGA 187
              +    D  +  L LSL    G++GM+GGQ  DI  E  D      Q+  +Q  KTGA
Sbjct: 129 G--RLDCADAAKLDLTLSLAQAAGVRGMVGGQAADIAAETADVPLTLDQIIALQAGKTGA 186

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           LM +A   G  MA A Q     LR +G+ LG+ FQ+ADD+LD   D
Sbjct: 187 LMSWAALVGPRMALADQAA---LRLYGDCLGLAFQIADDVLDVTGD 229


>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [Clostridium sticklandii DSM 519]
 gi|308825427|emb|CBH21465.1| geranyltranstransferase [Clostridium sticklandii]
          Length = 295

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 125/219 (57%), Gaps = 8/219 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ++  +D+LL      +   +  +L+ +++Y++  GGK++R  L  E   L N N    + 
Sbjct: 14  VEKYMDELL-----SINVIYEKKLIESMKYSVQAGGKRLRPILFLETIKLLNKNPFDFIE 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +  AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E TAI+AG+GLL  A EI+ + 
Sbjct: 69  IACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDGLLNLAHEIMIAF 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFA 192
            ++         +  ++   G+ GM+ GQ +DI+ E   ID   +  I   KTGAL+  +
Sbjct: 129 VSKKLTKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTMKFIHSNKTGALIEAS 188

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             + A+M+ A       L+ + + +G+ FQ+ DD+LD E
Sbjct: 189 IVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIE 227


>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
 gi|1345836|sp|P48368|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
           Short=GGPP synthase; AltName:
           Full=Farnesyltranstransferase
 gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
          Length = 300

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 119/205 (58%), Gaps = 7/205 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  +IRY+L  GGK+IR  L      L       AL    A+E IH  SLIHDDLP+MDN
Sbjct: 37  IYDSIRYSLSAGGKRIRPILCLASCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDN 96

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGKPT HI Y E  AI+AG+ LL YAFE I++    +  ++  +++  + H++   
Sbjct: 97  DSYRRGKPTNHIIYGEDLAILAGDALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTS 156

Query: 158 GMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G++GGQ++D+  E   +T    +  I   KTGAL+  A  SGA++A A + +  R   + 
Sbjct: 157 GLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYA 216

Query: 215 ENLGIIFQLADDLLD---CEEDLPK 236
           +N+G+ FQ+ DD+LD    EE L K
Sbjct: 217 QNIGLAFQIIDDVLDIISTEEKLGK 241


>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
          Length = 319

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 117/198 (59%), Gaps = 4/198 (2%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+ Y+L  GGK+IR  L+         +    L V  AIE IH YSLIHDDLPSMD
Sbjct: 33  KLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIG 155
           N  +RRGKPT H  + E  AI+AG+GLLTYAF+ I+     ++  ++R +L+  L    G
Sbjct: 93  NDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIVEIDDERIPPSVRLRLIERLAKAAG 152

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +GM+ GQ  D++ E   +  +++  I + KTG ++ ++  +GA++  A   +   L  F
Sbjct: 153 PEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEF 212

Query: 214 GENLGIIFQLADDLLDCE 231
             +LG+ FQ+ DD+LD E
Sbjct: 213 AAHLGLAFQIRDDILDIE 230


>gi|88607928|ref|YP_504938.1| geranyltranstransferase [Anaplasma phagocytophilum HZ]
 gi|88598991|gb|ABD44461.1| geranyltranstransferase [Anaplasma phagocytophilum HZ]
          Length = 280

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 113/196 (57%), Gaps = 3/196 (1%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ AI Y +L  GK +R+FL +  A  F V+    L +  AIE +H YSL+HDDLPSMDN
Sbjct: 37  LVDAIGYCILPPGKCLRAFLASSVAQTFGVSIERTLPLCLAIEVLHSYSLVHDDLPSMDN 96

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK + HI++ E  A++ G+ LLT  FE++SS        ++  ++  ++   G +
Sbjct: 97  APTRRGKNSCHIEHGEALALLTGDALLTLTFELLSSMDESC--TVKCAIIRVISDACGHR 154

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GM+ GQ LD+ +       V  I K+KT  L   ACESGAI+A  S   ++ L  +GE L
Sbjct: 155 GMVAGQALDMGNLEPSLEAVKQIHKLKTARLFSAACESGAILAEVSTANQQALASYGETL 214

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ  DDL D  ED
Sbjct: 215 GCAFQAKDDLCDINED 230


>gi|313884672|ref|ZP_07818428.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620040|gb|EFR31473.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 300

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 12/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +V     +F   +L   L    A+E IH YSLIHDDLP+MDN  +RRG+PT 
Sbjct: 41  GGKRLRPLMVLLVIDIFEQANLKDGLSTAFALEYIHTYSLIHDDLPAMDNDDLRRGQPTN 100

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H+Q+DE TAI+AG+ LLT AF +I+  + +LK   R +L+  L+ + G  GM+ GQ+ DI
Sbjct: 101 HVQFDEATAILAGDALLTDAFALIAQ-EAKLKPRQRLKLIELLSRSAGSTGMVAGQLFDI 159

Query: 168 QDEFIDETQVFMIQ------KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           +     E Q   I+      ++KTG L  +AC++GAI++ AS  E + +  F +  G+ +
Sbjct: 160 R----AENQTLTIEALKNIHRLKTGRLFSYACQAGAIISDASDKELKLIDEFAQAFGLAY 215

Query: 222 QLADDLLDC 230
           Q+ +DL D 
Sbjct: 216 QIHNDLQDV 224


>gi|304395483|ref|ZP_07377366.1| Polyprenyl synthetase [Pantoea sp. aB]
 gi|304356777|gb|EFM21141.1| Polyprenyl synthetase [Pantoea sp. aB]
          Length = 299

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+ Y ALLGGK++R FLV     + + +  +     AA+ECIH YSLIHDDLP+MD+
Sbjct: 32  LVNAMHYGALLGGKRLRPFLVYATGEMLHADPASLDAPAAAVECIHAYSLIHDDLPAMDD 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI+Y E TAI+AG+ L T AF I++      +    R  ++  L    G+
Sbjct: 92  DALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADEAMPGVSAEYRLMMLSELAKASGV 151

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213
            GM GGQ LD+  E   +D  Q+  I + KTGAL+  A   GA+ A  A +     L  +
Sbjct: 152 AGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLDRY 211

Query: 214 GENLGIIFQLADDLLDCEED 233
            E +G+ FQ+ DD+LD   D
Sbjct: 212 AEAIGLAFQVQDDILDVVGD 231


>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 296

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 119/204 (58%), Gaps = 11/204 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY LL GGK++R FLV     +  V +       AA+ECIH YSL+HDDLP+MD
Sbjct: 31  RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKNELLDGPAAAVECIHAYSLLHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLS-LTH 152
           N  +RRG+PTVH  +DE TAI+AG+ L T AF I++    P + L + +R   MLS L  
Sbjct: 91  NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFTILADHPMPDSLLANRVR---MLSRLAR 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKER 209
             G  GM GGQ LD+Q E   I   ++  + + KTGAL+  A   GA+  A   +     
Sbjct: 148 ASGYLGMCGGQALDLQAEGRQISIAELEQVHRHKTGALIECAVALGALCKADVDETTLSA 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L+ +   +G+ FQ+ DD+LD   D
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGD 231


>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
 gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
          Length = 287

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 7/209 (3%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +++  A+RY+LL GGK++R  L      L       A+    ++E IH  SLIHDDLP
Sbjct: 20  YPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMPTACSLEMIHTMSLIHDDLP 79

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H  Y E  AI+AG+GLL+YAFE +++  T +       ++  L   
Sbjct: 80  AMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQTTNVPPQQVLDVIGHLGRA 139

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           +G  G++GGQ++D++ E    I E Q+  I   KTGAL+     SGAI+A  S   +ERL
Sbjct: 140 VGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEACVVSGAILAGTSTENRERL 199

Query: 211 RCFGENLGIIFQLADDLLD---CEEDLPK 236
             + + +G+ FQ+ DD+LD    +E+L K
Sbjct: 200 SRYAQKIGLAFQIVDDILDITATQEELGK 228


>gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110]
 gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110]
          Length = 305

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 4/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   +     N   ALR   A E IH YSL+HDDLPSMDN  +
Sbjct: 44  AMRYAVLDGGKRLRPLLVLAASEAVGGNAAAALRAACATELIHAYSLVHDDLPSMDNDVL 103

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+++ E  A++AG+ L   AFE+++    ++  +I++ L   L    G QGM 
Sbjct: 104 RRGKPTVHVKFGEADALLAGDALQALAFELLTPEGDEIPASIQAALCRLLARAAGSQGMA 163

Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENL 217
           GGQ +D+      +DE Q+  + ++KTGAL+  + E GA  A A        LR +G  +
Sbjct: 164 GGQAIDLASVGLALDEAQLREMHRLKTGALLQGSVEMGAACAGAVAPAALSALRDYGAAI 223

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LD   D
Sbjct: 224 GLAFQVVDDILDVTAD 239


>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
 gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
          Length = 298

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 123/199 (61%), Gaps = 6/199 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLP 93
           + RL  +++Y++  GGK+IR  L+    + F+    TA+ +  AA+E +H YSLIHDDLP
Sbjct: 29  DQRLFKSMQYSIQAGGKRIRPLLLAATVAAFHKPVNTAVYQCAAALEMVHTYSLIHDDLP 88

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN  +RRGKPT H  + E  AI+AG+GLLT AF++++    +++ N +  L+  L+  
Sbjct: 89  AMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVA--MAEIEANQKVLLLQQLSKA 146

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQ  DIQ E   +   ++  I + KTG L+ FA  +G ++A  ++     L 
Sbjct: 147 AGTQGMVAGQAADIQGENQALSLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELD 206

Query: 212 CFGENLGIIFQLADDLLDC 230
            F +++G+ FQ+ DDLLD 
Sbjct: 207 RFAQHIGLAFQIRDDLLDA 225


>gi|113971065|ref|YP_734858.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4]
 gi|113885749|gb|ABI39801.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4]
          Length = 293

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/186 (45%), Positives = 115/186 (61%), Gaps = 2/186 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           ALLGGK+IR FLV     +F V         AAIECIH YSLIHDDLP+MD+  +RRG+P
Sbjct: 39  ALLGGKRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQP 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVHI +DE TAI+AG+ L T AFEI++   T +       ++ +L    G +GM GGQ +
Sbjct: 99  TVHIAFDEATAILAGDALQTLAFEIVTEAVTGISSEQHIAMVRALAKASGYRGMCGGQAI 158

Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D+   D+ ID   +  +  MKTGAL+  A E   I A+A ++E + +  F   +G+ FQ+
Sbjct: 159 DLASTDKLIDLKALTQLHNMKTGALISCAVELALIAANAPKDEYQTMIEFAHAVGLAFQV 218

Query: 224 ADDLLD 229
            DD+LD
Sbjct: 219 QDDILD 224


>gi|329888094|ref|ZP_08266692.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328846650|gb|EGF96212.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 303

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 120/195 (61%), Gaps = 1/195 (0%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA LG GK++R F   E   +  V    ALR   A+EC+H YSL+HDDLP+MD
Sbjct: 41  RLTEAMRYAALGPGKRLRPFFAIEAGRMLEVEERAALRAACALECVHAYSLVHDDLPAMD 100

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT+HI YDE TAI+AG+ L T AF+II    T     +R +L   L+   G 
Sbjct: 101 DDDVRRGRPTLHIAYDEATAILAGDALQTAAFDIILDEDTHDDAVVRCELARRLSFASGA 160

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +GM GGQM+D+     D   V  +Q++KTGAL  +A E   I+A A++     L  F  +
Sbjct: 161 RGMAGGQMIDLMGVRDDLGGVARMQRLKTGALFAYAFEIPLIIADANEAAWHALTSFAHD 220

Query: 217 LGIIFQLADDLLDCE 231
           +G+ +Q+ DD+LD E
Sbjct: 221 IGLAYQIVDDVLDAE 235


>gi|114048295|ref|YP_738845.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7]
 gi|113889737|gb|ABI43788.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7]
          Length = 293

 Score =  141 bits (355), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 2/212 (0%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DD L Q  S ++        +    ALLGGK+IR FLV     +F V+        AAI
Sbjct: 13  VDDQLKQRFSTLEDTAAQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVSLEKLDACAAAI 72

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           ECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFEI++     + 
Sbjct: 73  ECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGIS 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGA 197
                 ++ +L    G +GM GGQ +D+   D+ ID   +  +  MKTGAL+  A E   
Sbjct: 133 SEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKTGALISCAVELAL 192

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I A+A ++E + +  F   +G+ FQ+ DD+LD
Sbjct: 193 IAANAPKDEYQTMMEFAHAVGLAFQVQDDILD 224


>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
 gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
          Length = 294

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 124/200 (62%), Gaps = 6/200 (3%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +  +  ++Y L  GGK++R  L      LF  ++  A+    ++E IH YSL+HDDLP+M
Sbjct: 31  NSFIEMLKYPLDAGGKRLRPVLTLLACELFEGDYKKAVIPAVSLELIHTYSLVHDDLPAM 90

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRGKPT H++Y E  AI+ G+GLLT+AF+++S  K  +KD+   +L+  L++  G
Sbjct: 91  DNDDLRRGKPTTHVKYGEANAILVGDGLLTHAFQLLS--KADVKDSTLRKLLFELSYAAG 148

Query: 156 LQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + GM+ GQ +D+  +++ I+   + ++   KT A++  A   GAI +  + N+ E +  +
Sbjct: 149 INGMVMGQFIDLYYEEKEINFDMLKVLHAKKTAAMIRGAVRLGAISSE-NDNDIENITKY 207

Query: 214 GENLGIIFQLADDLLDCEED 233
           GE +G+ FQ+ DD+LD   D
Sbjct: 208 GEAIGLAFQIQDDILDVISD 227


>gi|190150135|ref|YP_001968660.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307263471|ref|ZP_07545086.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189915266|gb|ACE61518.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306871114|gb|EFN02843.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 297

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 125/201 (62%), Gaps = 6/201 (2%)

Query: 35  HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           ++  L+ A+ YA LLGGK++R FL+     + +V         AA+E IH YSL+HDDLP
Sbjct: 30  YDSALIEAMSYAVLLGGKRVRPFLIYATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLP 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT HI +DE TAI+AG+ L ++AFE+I+  ++ L D+ + + + SL   
Sbjct: 90  AMDDDKLRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDES-LTDSQKVRQIQSLAQA 148

Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KER 209
            G +GM  GQ LD+  +D  ++  ++ +I + KT AL+  +   G  ++  SQN   K+ 
Sbjct: 149 AGARGMCLGQSLDLLAEDTAVNLAELELIHRNKTSALIIASVLMGFNLSAHSQNLAIKQP 208

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  + + +G+ FQ+ DD+LD 
Sbjct: 209 LERYAQAIGLAFQVQDDILDV 229


>gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
 gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
          Length = 306

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 13/200 (6%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+RY A+LGGK++R +LV     +F ++ +      AAIECIH YSLIHDDLP+MDN
Sbjct: 39  LVEAMRYGAVLGGKRLRPYLVYATGQMFGLSLVNLDAPAAAIECIHAYSLIHDDLPAMDN 98

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT H+++ E  AI+AG+ L T AF I++    + + D  R  ++  L    G+
Sbjct: 99  DDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEADMSDVADKDRLAMVAELARASGV 158

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM GGQ LD++ E   I    +  I + KTGAL+  A   GA+ A     E+ R     
Sbjct: 159 AGMCGGQALDLEAEARQISLADLEQIHRHKTGALIRAAVRLGALAA----GERGRAALPF 214

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  + E +G+ FQ+ DD+LD
Sbjct: 215 LDRYAEAIGLAFQVQDDILD 234


>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
 gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
          Length = 313

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 14/201 (6%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   A          LR G A+E IH YSL+HDD+P MDN  +
Sbjct: 52  AMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTM 111

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+Q+ E +A++AG+ L   AFE++      +  +++++L   L    G QGM 
Sbjct: 112 RRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMA 171

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC------ 212
           GGQ +D+    + + E Q+  + ++KTGAL+      G+++  A+ N +   R       
Sbjct: 172 GGQAIDLASVGKQLSEAQLREMHRLKTGALLL-----GSVLMGAACNAQTDARALAALTD 226

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G+ LG+ FQ+ DD+LD   D
Sbjct: 227 YGQALGVAFQVVDDILDVVAD 247


>gi|89052580|ref|YP_508031.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
 gi|88862129|gb|ABD53006.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
          Length = 288

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 119/205 (58%), Gaps = 8/205 (3%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +D +   +RYA  GGK++R FL  E A+LF+V    AL    A+EC+H YSL+HDDLP M
Sbjct: 26  DDTIAQGMRYATGGGKRLRGFLALESAALFDVPPGQALYAAGAVECLHAYSLVHDDLPCM 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG+PTVH ++D+ TA++ G+ L T+AFE+IS       +  R  L  SL    G
Sbjct: 86  DDDDLRRGQPTVHKKWDDATAVLVGDALQTFAFELISREDAGTAEE-RVALTASLAKASG 144

Query: 156 LQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            QGM+ GQ  DI  E         ++  +Q  KTG L+ +   +GA++  A     +R  
Sbjct: 145 AQGMVLGQAQDIAAETAGRALTLQEITGLQANKTGRLIEWPAHAGAVLGGADPAPLQR-- 202

Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
            +   +G+ FQ+ADD+LD E D  K
Sbjct: 203 -YARAIGLAFQIADDILDVEGDAAK 226


>gi|262274770|ref|ZP_06052581.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Grimontia
           hollisae CIP 101886]
 gi|262221333|gb|EEY72647.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Grimontia
           hollisae CIP 101886]
          Length = 310

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/247 (37%), Positives = 130/247 (52%), Gaps = 25/247 (10%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRL--------------LSAIRY-ALLGGKKI 53
           L  N  +I  + D  L  T  H QT++ND+L              + A+++ ALLGGK++
Sbjct: 2   LPWNLLKIRAMSDTALTSTLLHYQTRNNDKLAYWLASLGHQEQPLIQAMKHGALLGGKRV 61

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           R FL      LF           AA+ECIH YSLIHDDLP+MDN  +RRG+PT H+ +DE
Sbjct: 62  RPFLTYMTGKLFGAPDEALDTPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHVAFDE 121

Query: 114 VTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +AI+AG+ L T AF I++    SP+ +     R Q++  L    G  GM  GQ LD+  
Sbjct: 122 ASAILAGDALQTLAFTILAEGDLSPEGE---AYRIQMVKELAAASGAAGMCLGQALDLSA 178

Query: 170 EF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADD 226
           E   +D   +  I + KTGAL+  A   GA+ A         +L  F   +G+ FQ+ DD
Sbjct: 179 EGKKVDVDTLETIHRNKTGALIRCAVRLGALAAGKKGATYLSQLDTFSNAIGLAFQVQDD 238

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 239 ILDIISD 245


>gi|332534969|ref|ZP_08410787.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035587|gb|EGI72079.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 295

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 122/197 (61%), Gaps = 4/197 (2%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +A +Y L  GGK++R FLV     +   N      + AAIECIH YSL+HDDLP+MD+  
Sbjct: 34  NATQYGLFNGGKRLRPFLVYATGKMLGANQQDLHVLAAAIECIHSYSLVHDDLPAMDDDD 93

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PT HI++ E  AI+AG+ L T AFE+I++ K       + +++ +L H  GL+GM
Sbjct: 94  LRRGRPTCHIEFGEANAILAGDALQTLAFELIANHKFTCSSQTQVKMIATLAHASGLEGM 153

Query: 160 LGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGEN 216
           +GGQ LDI   D+ I   ++  I K+KTGAL+  A   GA+ +  A Q   E L  FG  
Sbjct: 154 VGGQGLDIAATDKVITVQELARIHKLKTGALINCAITLGALCSEKADQQTLENLSIFGYA 213

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQ+ DD+LD E D
Sbjct: 214 IGLAFQVHDDILDVEGD 230


>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
 gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
          Length = 295

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 117/197 (59%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++RY++  GGK++R  L+            +AL    A+E IH YSLIHDDLP+MDN
Sbjct: 32  LHGSMRYSVFAGGKRVRPVLLLAACEAVGGELNSALPAACAMEMIHTYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG PT H  Y E TAI+AG+ LLT AF ++S     ++   R +++  + H  G +
Sbjct: 92  DDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSCNGEGMEPGARLRVIHEIAHASGSR 151

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           GM+GGQM+D++ E    ID   +  I   KTGAL+  +  +GAI+  A++   + L  + 
Sbjct: 152 GMVGGQMVDMESEGKHDIDMATLSYIHTHKTGALIRASVRAGAILGGANEETFDALTRYA 211

Query: 215 ENLGIIFQLADDLLDCE 231
           + +G+ FQ+ADD+LD E
Sbjct: 212 DAIGLAFQIADDVLDVE 228


>gi|229828869|ref|ZP_04454938.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM
           14600]
 gi|229792032|gb|EEP28146.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM
           14600]
          Length = 305

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 136/232 (58%), Gaps = 11/232 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +L+E +   + I+   L +   + +T     ++ A+ YAL+  GK++R  L+ ECA+ F+
Sbjct: 14  ELEERTLEAEGIIRRFLPREEGYQKT-----IMEAMSYALMSPGKRLRPILMRECAACFD 68

Query: 67  VNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                AL    AAIE IH YSL+HDDLP+MDN  +RRGKPT H ++ E   ++AG+ LL 
Sbjct: 69  QTSPQALPFFMAAIEMIHAYSLVHDDLPAMDNDLLRRGKPTTHARFGEAMGVLAGDALLN 128

Query: 126 YAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQ 181
           YAFE  + S +T   +    + ++ L    G+ GM+GGQ++D++ E I   D+ ++  I 
Sbjct: 129 YAFETALQSLETDGTNPAVHKSLILLARKAGIYGMIGGQVVDVESEHIQGMDKHRLDFIH 188

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++KTGAL+  A   GA++  A +++   +      +G+ FQ+ DD+LD   D
Sbjct: 189 ELKTGALIEAAMCIGALLGGADESQLLTVEQAAAKIGLAFQIEDDILDITGD 240


>gi|322514115|ref|ZP_08067184.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
 gi|322120026|gb|EFX92005.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
          Length = 297

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 135/235 (57%), Gaps = 11/235 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L + L    +RI+       L T       +   L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MSYSLSTDLTAIQQRIND-----FLATKLQAHQAYGSPLIDAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V+        AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGRMLGVSLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDETTAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
           G+ L ++AFE+I+  ++ L D+ +   + +L    G +GM  GQ LD+  +D+ ++  ++
Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVWQIQALAQAAGARGMCLGQSLDLLAEDKAVNLAEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDC 230
            +I + KTGAL+  +   G   +  SQN   K+ L  + + +G+ FQ+ DD+LD 
Sbjct: 175 ELIHRNKTGALIVASVLMGFNSSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDV 229


>gi|282876057|ref|ZP_06284924.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
 gi|281295082|gb|EFA87609.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
          Length = 298

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 35  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 95  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHW 153

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 154 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 213

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 214 HLGMMFQIKDDLLDVYGDESK 234


>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
 gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
          Length = 296

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 3/186 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L+    + F  +    L   AAIE +H YSLIHDDLPSMDN  +RRGKPT H
Sbjct: 44  GGKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDDLPSMDNDDLRRGKPTNH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             + E  AI+AG+ LLTY+F+ I+ +P        +  L+  L+   G +GM+GGQ  DI
Sbjct: 104 KVFGEAFAILAGDALLTYSFQTIAETPDEFASAETKLSLIKELSKASGAEGMVGGQAADI 163

Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + E   +    +  I   KTG L+  +  SGAI+A+ASQ   + L  F  +LG+ FQ+ D
Sbjct: 164 KGEGKQLGLEDLEYIHVHKTGKLLECSVVSGAILANASQETIQALSKFAYHLGLAFQIRD 223

Query: 226 DLLDCE 231
           D+LD E
Sbjct: 224 DILDLE 229


>gi|27468120|ref|NP_764757.1| geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
 gi|251810934|ref|ZP_04825407.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
 gi|27315666|gb|AAO04801.1|AE016748_35 geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
 gi|251805614|gb|EES58271.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
          Length = 293

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 30  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 90  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHW 148

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 149 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 209 HLGMMFQIKDDLLDVYGDESK 229


>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
 gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
          Length = 297

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 15/202 (7%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA LGG K++R  L      L          VG A+E IH YSL+HDDLP MD
Sbjct: 34  RLHEAMRYATLGGGKRVRPLLAHAAGELTGATPEALDIVGCAVEMIHAYSLVHDDLPCMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLSLT 151
           +  +RRG+PT H+++DE TA++ G+ L T AFE+++S     PK QL      +++  L 
Sbjct: 94  DDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFELLASQPLGEPKQQL------EIIALLA 147

Query: 152 HNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKE 208
           H  G +GM GGQ +D+    + + + ++ ++  +KTGAL+  A   GA+     S +E+ 
Sbjct: 148 HASGSRGMAGGQAIDLASVGKPLTQPELELMHALKTGALIRAAVLLGALAGQPLSADERT 207

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
            L  F +  G++FQ+ DD+LDC
Sbjct: 208 SLDRFAKRAGLLFQVVDDILDC 229


>gi|289663219|ref|ZP_06484800.1| polyprenyl synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668286|ref|ZP_06489361.1| polyprenyl synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 291

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 124/204 (60%), Gaps = 9/204 (4%)

Query: 33  TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T    RL +A+RYA+LGG K++R  LV    +LF            A+E IH YSL+HDD
Sbjct: 25  THAPQRLHAAMRYAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++  T  +  +R   M SL 
Sbjct: 85  LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASTSAE--LRVGWMQSLA 142

Query: 152 HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              G  GM GGQ LD+    Q + + + Q   +  +KTGAL+  A   GA+   A+ +++
Sbjct: 143 TAAGAAGMCGGQALDMDATGQLQPLQDLQ--RMHALKTGALIRAAVRMGALTGGAAADDQ 200

Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
           +RL  F + LG+ FQ+ DD+LD E
Sbjct: 201 QRLGAFADALGLAFQVRDDILDVE 224


>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
 gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
          Length = 382

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 7/205 (3%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +Q ++ +++  A+RY+LL GGK++R  L      L       A+    A+E IH  SLIH
Sbjct: 109 VQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGTEKLAMPTACAMEMIHTMSLIH 168

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLM 147
           DDLP MDN   RRGKPT H  + E TA++AG+ LL++AFE   +S+ K+   D I  +++
Sbjct: 169 DDLPCMDNDDFRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKSVGSDRIL-RVV 227

Query: 148 LSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             L   IG QG++GGQ+ DI  E    +D   +  I   KT  L+  +   GAI++ AS+
Sbjct: 228 SELGRTIGSQGLVGGQVADITSEGNASVDLDTLEWIHIHKTAVLLECSVVCGAIISGASE 287

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
           NE ER++ +  ++G++FQ+ DD+LD
Sbjct: 288 NEIERVKRYARSVGLLFQVVDDILD 312


>gi|253990912|ref|YP_003042268.1| Geranyltranstransferase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP
           synthase [Photorhabdus asymbiotica]
          Length = 305

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 138/232 (59%), Gaps = 14/232 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF- 65
           + ++  K     ++ +L+ T S + T  N  L+ A+++ ALLGGK++R FLV     +F 
Sbjct: 8   QFEQQLKTYQQRVNKVLISTLSSL-TFPNSPLVRAMQHGALLGGKRLRPFLVYAVGEMFG 66

Query: 66  -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            + N+L A    AA+ECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG+ L 
Sbjct: 67  LSANNLDA--PAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDALQ 124

Query: 125 TYAFEIISSPKTQLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
             AFEI+S  K ++ D     R +++  L    G+ GM GGQ LD++ E   ID   +  
Sbjct: 125 ALAFEILS--KREMPDVTTANRLEMLAELATASGIAGMCGGQSLDLEAEGKHIDLQALEQ 182

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230
           I + KTGAL+  A + GA  A  S ++    L  + + +G+ FQ+ DD+LD 
Sbjct: 183 IHRHKTGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQVQDDILDV 234


>gi|329737240|gb|EGG73494.1| geranyltranstransferase [Staphylococcus epidermidis VCU028]
          Length = 288

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 25  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 85  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHW 143

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 144 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 204 HLGMMFQIKDDLLDVYGDESK 224


>gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 294

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 119/195 (61%), Gaps = 7/195 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+LL GGK++R  L    A + +      +  G AIE IH YSLIHDDLP+MDN   
Sbjct: 35  AMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVINFGCAIEMIHTYSLIHDDLPAMDNDDY 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQG 158
           RRGKPT H  + E  AI+AG+GLL  A+EI+ +   + K  D +R+  +++     G  G
Sbjct: 95  RRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESKSIDKMRAAGIVA--KYAGSLG 152

Query: 159 MLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           M+GGQ++D+Q E   I+  ++  + ++KTGAL+    E+ A++  A + E E L  +  N
Sbjct: 153 MVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGYAAN 212

Query: 217 LGIIFQLADDLLDCE 231
           LG+ FQ+ DD+LD E
Sbjct: 213 LGLAFQIKDDILDIE 227


>gi|8272414|dbj|BAA96459.1| farnesyl diphosphate synthase [Rhodovulum sulfidophilum]
          Length = 289

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 141/234 (60%), Gaps = 14/234 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S L+  ++RI+T L + L   A    TQ       A+RYA+ GGK++R FLV E A+L++
Sbjct: 4   SSLKSAAERIETRLTEALAGAADQPVTQ-------AMRYAVSGGKRLRGFLVLESAALYD 56

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +    A+   AA+E +H YSL+HDD+P MD+  +RRG+PTVH+++D+ TA++ G+ L T 
Sbjct: 57  IAPEAAVDAAAAVEALHAYSLVHDDMPCMDDDDLRRGQPTVHVKWDDGTALLTGDALQTL 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQK 182
           AFE++S+P       +R  L+ SL    G+ GM+ GQ  DI  E    +    ++  +Q 
Sbjct: 117 AFELLSAPACHPDPAVRIDLVASLARASGIDGMVLGQAQDIAAETAGRSLTLDEITELQA 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KTGAL+ ++ E+GA +A A   +   L  +   LG+ FQ+ADD+LD E D  K
Sbjct: 177 NKTGALIRWSAEAGARLARA---DIAPLTAYSTALGLAFQIADDILDVEGDAAK 227


>gi|117921341|ref|YP_870533.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3]
 gi|117613673|gb|ABK49127.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3]
          Length = 293

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 123/212 (58%), Gaps = 2/212 (0%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DD L Q  S ++        +    ALLGGK+IR FLV     +F V         AAI
Sbjct: 13  VDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDASAAAI 72

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           ECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFEI++     + 
Sbjct: 73  ECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGIS 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGA 197
                 ++ +L    G +GM GGQ +D+   D+ ID   +  +  MKTGAL+  A E   
Sbjct: 133 SEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKTGALISCAVELAL 192

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I A+A ++E + +  F   +G+ FQ+ DD+LD
Sbjct: 193 IAANAPKDEYQTMMEFAHAVGLAFQVQDDILD 224


>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
 gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
          Length = 326

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 119/214 (55%), Gaps = 5/214 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D  L   S         L  ++RY+L+ GGK++R  L    A          + V  ++E
Sbjct: 45  DCFLDQVSPPTATPPTTLHESMRYSLMAGGKRVRPILTIAAAEAIGATPPGLMAVACSLE 104

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK--TQL 138
            IH YSLIHDDLPSMDN   RRGKPT H  Y E  AI+AG+ LLT AF++IS P+     
Sbjct: 105 FIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEAMAILAGDALLTMAFDLISRPELMKGC 164

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196
           +   + +++  L +  G  GM+GGQ+ DIQ E   ID   +  I K KTG L+  A   G
Sbjct: 165 EPTRQVRILQELAYGSGNMGMVGGQVFDIQAENQDIDLPTLQNIHKHKTGMLIRAAVRMG 224

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A+ A A+  + + +  + E++G+ FQ+ADD+L+ 
Sbjct: 225 AMAAGATDRQLDDMTGYAEDIGLAFQIADDVLNV 258


>gi|254797046|ref|YP_003081883.1| putative geranyltranstransferase [Neorickettsia risticii str.
           Illinois]
 gi|254590280|gb|ACT69642.1| putative geranyltranstransferase [Neorickettsia risticii str.
           Illinois]
          Length = 256

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 128/227 (56%), Gaps = 27/227 (11%)

Query: 8   KLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
           KLQ+ S+ I +T+ ++L L  +        D+L  AIRY+LL     IR FLV E  +LF
Sbjct: 6   KLQKASRLIHETLKENLSLFPS-------EDKLFQAIRYSLLAESSHIRGFLVLELGTLF 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N+ ++  + V AAIE IH +SLIHDDLP++DN   RR +P  HI + E TAI+AG+ LL 
Sbjct: 59  NIPYVDTIEVAAAIEMIHSFSLIHDDLPALDNSNERRNQPACHIAFQESTAILAGDALLV 118

Query: 126 YAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
            A++I+S   +P  Q       +++    H++     +G   L   DE         I K
Sbjct: 119 LAYQILSHYGAPLVQRTSKYVLEMITGQVHDV-----IGSSTL-TADE---------INK 163

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           MK+G+L   +C S   +A+++Q+E   L  FG  +GIIFQ  DD+ D
Sbjct: 164 MKSGSLFALSCSSVGHLANSAQSELTVLEAFGYEIGIIFQAVDDIKD 210


>gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
 gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
          Length = 295

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 123/199 (61%), Gaps = 6/199 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLP 93
           + RL  +++Y++  GGK+IR  L+    + F+    TA+ +  AA+E +H YSLIHDDLP
Sbjct: 26  DQRLFESMQYSIQAGGKRIRPLLLVATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN  +RRGKPT H  + E  AI+AG+GLLT AF++++    +++ N +  L+  L+  
Sbjct: 86  AMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM--AEIEANQKVLLLQQLSKA 143

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQ  DIQ E   +   ++  I + KTG L+ FA  +G ++A  ++     L 
Sbjct: 144 AGTQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELD 203

Query: 212 CFGENLGIIFQLADDLLDC 230
            F +++G+ FQ+ DDLLD 
Sbjct: 204 RFAQHIGLAFQIRDDLLDA 222


>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
           7420]
 gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
           7420]
          Length = 309

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+E   +++  LD         +   + +++  A+RY+LL GGK++R  L      
Sbjct: 19  LSTYLKERKAQVEAALD-------RSLPLGYPEKIYEAMRYSLLAGGKRLRPILCLATCE 71

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       A+    A+E +H  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+GL
Sbjct: 72  LMGGTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGDGL 131

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           L YAFE +++    +      Q++  L   +G  G++GGQ++D++ E    I E  +  I
Sbjct: 132 LAYAFEYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLHYI 191

Query: 181 QKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+  C  C  G I+A A+  + ERL  + +N+G+ FQ+ DD+LD
Sbjct: 192 HTHKTGALLETCVVC--GGILAGATDADIERLSRYAQNIGLAFQIIDDILD 240


>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 296

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 116/203 (57%), Gaps = 9/203 (4%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY LL GGK++R FLV     +  V         AA+ECIH YSL+HDDLP+MD
Sbjct: 31  RLRDAMRYGLLLGGKRVRPFLVYAVGEMLGVKRELLDGPAAAVECIHAYSLLHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHN 153
           N  +RRG+PTVH  +DE TAI+AG+ L T AF I++    P   L + +R  ++ +L   
Sbjct: 91  NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPLPDRLLANRVR--MLSTLARA 148

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERL 210
            G  GM GGQ LD+Q E   I   ++  + + KTGAL+  A   GA+  A         L
Sbjct: 149 SGYLGMCGGQALDLQAEGRQISLPELEQVHRHKTGALIECAVALGALCKADVDDTTLAAL 208

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           + +   +G+ FQ+ DD+LD   D
Sbjct: 209 QTYAAAIGLAFQVQDDILDITGD 231


>gi|293392564|ref|ZP_06636884.1| geranyltranstransferase [Serratia odorifera DSM 4582]
 gi|291424966|gb|EFE98175.1| geranyltranstransferase [Serratia odorifera DSM 4582]
          Length = 300

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 123/204 (60%), Gaps = 11/204 (5%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDL 92
           + D ++ A+R+ ALLGGK++R FLV     +F V+ L  L V  AAIECIH YSLIHDDL
Sbjct: 29  NKDAMVEAMRHGALLGGKRLRPFLVYATGEMFGVS-LNNLDVPAAAIECIHAYSLIHDDL 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLS 149
           P+MDN  +RRG+PT HI++ E  AI+AG+ L T AF I++    P   L+D  R  ++  
Sbjct: 88  PAMDNDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADADMPDVALRD--RLAMVSE 145

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNE 206
           L    G+ GM GGQ LD+  E   I+   +  I ++KTGAL+  A   GA+ A    +  
Sbjct: 146 LAGASGVAGMCGGQALDLAAEGRQINLEALEQIHRLKTGALIRAAVRLGALAAGEPGRAA 205

Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
             +L  +   +G+ FQ+ DD+LD 
Sbjct: 206 LVQLDRYAAAIGLAFQVQDDILDV 229


>gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
 gi|224956711|gb|EEG37920.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
          Length = 297

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 11/233 (4%)

Query: 5   LPSKLQENSKRIDTILD--DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
           +PS  ++ SK+I+ I    D  L     +Q      +LSA+ Y++  GGK++R  L+ E 
Sbjct: 1   MPSIKEQLSKKIEKIEQTIDFYLPEEKGLQKT----VLSAMNYSVKAGGKRLRPMLMAET 56

Query: 62  ASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             +F     + +    AAIE IH YSLIHDDLP++DN  +RRG PT HI++ E  AI+AG
Sbjct: 57  YEMFGGADSSVIEPFMAAIEMIHTYSLIHDDLPALDNDALRRGMPTAHIKFGEAMAILAG 116

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           + LL YAFE  +        +I++   L  LT   G+ GM+GGQ +D++ E   I    +
Sbjct: 117 DALLNYAFETAAKAFDGTNKDIQTAKALQILTRKPGIYGMIGGQTVDVEQENKAISFDTL 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             I   KT AL+  A   GA++A AS+ E   +      +GI FQ+ DD+LD 
Sbjct: 177 MYIHNNKTAALIECAMMIGAVLAGASEKEVSMIEQIANKVGIAFQIEDDILDV 229


>gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
           23834]
 gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
           23834]
          Length = 295

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  LV   A L       A    AA+E +H YSL+HDD+P+MD
Sbjct: 32  RLHQAMRYAVLGGGKRLRPLLVLAAAELGQSEAAAAEAALAAVELVHVYSLVHDDMPAMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H+QYDE TA++ G+ L T AF+++S P   L    + Q++ +L    G 
Sbjct: 92  NDSLRRGKPTCHVQYDEATALLVGDALQTLAFDVLSRPNG-LPAPRQLQMVHTLARASGS 150

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213
            GM GGQ +D+Q   + I + ++  + ++KTGAL+  A   GA+      +    RL  +
Sbjct: 151 LGMAGGQAIDLQSVGQRIGQAELETMHRLKTGALIRAAVALGALSCPDLDDAALARLDDY 210

Query: 214 GENLGIIFQLADDLLDCEED 233
              LG+ FQ+ DD+LDCE D
Sbjct: 211 AAKLGLAFQVIDDVLDCEAD 230


>gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739]
 gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
          Length = 299

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MDN  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDNDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
 gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
          Length = 294

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 4/207 (1%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           ++  +   L SA+ Y+   GGK++R  L+ E   L        L   AAIE IH YSLIH
Sbjct: 24  LEEGYQKTLFSAMNYSYKAGGKRLRPILIMESYKLCGGKGSEYLPYAAAIEMIHTYSLIH 83

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148
           DDLP++DN  +RRGK T H  + E  AI+AG+GLL YA+E+I +      D   + +   
Sbjct: 84  DDLPALDNDDLRRGKKTNHKVFGEAMAILAGDGLLNYAYEVILNHALNSSDQPSAIKACK 143

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           ++    G+ GM+GGQ++D++ E   ID   +  I   KT A++    +SGA +A A  + 
Sbjct: 144 AIADGAGIYGMVGGQVVDVESESKEIDLACLDFIHLNKTAAMIVACMKSGAYLAGADDDT 203

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
            E+L  +G  LG+ FQ+ADD+LD E D
Sbjct: 204 VEKLEAYGRYLGLAFQIADDILDIEGD 230


>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
           HRM2]
 gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
           HRM2]
          Length = 316

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 9/196 (4%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           + GGK++R  L        +     AL    A+E IH YSL+HDDLP+MDN  +RRG PT
Sbjct: 55  MAGGKRLRPILCLAACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPT 114

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK----DNIRSQLMLSLTHNIGLQGMLGG 162
            H  + E TAI+AG+GLLT+AF+I+S P+   K      +R +L+  ++   G+ GM+ G
Sbjct: 115 CHRAFGESTAILAGDGLLTHAFQILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEG 174

Query: 163 QMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           QMLD+  +  DET   +     I  +KTG ++  +  +GA+ A A     E L  + E +
Sbjct: 175 QMLDMLLQNADETVTSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKI 234

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LD E D
Sbjct: 235 GLAFQIVDDILDVEGD 250


>gi|83951988|ref|ZP_00960720.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM]
 gi|83836994|gb|EAP76291.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM]
          Length = 287

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L  A+RYA  GGK++R++LV E A L  V    A+    AIE +H YSL+HDD+P MD+ 
Sbjct: 28  LAQAMRYATEGGKRLRAYLVIEGARLHGVPAEQAIWPATAIEALHAYSLVHDDMPCMDDD 87

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG+PTVH ++DE TA++ G+ L + AFE ++ P+      +R++L L L    G QG
Sbjct: 88  DLRRGRPTVHRKWDEATAVLVGDALQSLAFECVADPRAG-SGEVRAELCLGLARAAGGQG 146

Query: 159 MLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LDI  E         ++  +Q  KTGAL+ ++  +GA+MA A      R   + 
Sbjct: 147 MVLGQALDIAAETAGTPLSLDEITTLQAGKTGALIIWSGIAGAVMAGADPAPLTR---YA 203

Query: 215 ENLGIIFQLADDLLDCE 231
           + +G+ FQ+ADD+LD E
Sbjct: 204 QAVGLAFQIADDILDVE 220


>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
 gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
 gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
 gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
          Length = 295

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 122/197 (61%), Gaps = 6/197 (3%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95
           RL  +++Y++  GGK+IR  L+    + F+    TA+ +  AA+E +H YSLIHDDLP+M
Sbjct: 28  RLFESMQYSIQAGGKRIRPLLLAATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLPAM 87

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRGKPT H  + E  AI+AG+GLLT AF++++    +++ N +  L+  L+   G
Sbjct: 88  DNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM--AEIEANQKVLLLQQLSKAAG 145

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            QGM+ GQ  DIQ E   +   ++  I + KTG L+ FA  +G ++A  ++     L  F
Sbjct: 146 TQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRF 205

Query: 214 GENLGIIFQLADDLLDC 230
            +++G+ FQ+ DDLLD 
Sbjct: 206 AQHIGLAFQIRDDLLDA 222


>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
           MBIC11017]
 gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
           MBIC11017]
          Length = 301

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 4/200 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +++  A+RY+LL GGK++R  L      L       A+    A+E IH  SLIHDDLP
Sbjct: 34  YPEKIYEAMRYSLLAGGKRLRPILCLAACELAGGTIEMAMPTACALEMIHTMSLIHDDLP 93

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRGKPT H +Y E  AI+AG+GLL YA+E ++    Q+      +++  L H 
Sbjct: 94  AMDNDDFRRGKPTNHKKYGEDIAILAGDGLLAYAYEHVAIETQQVPPEQVLKVVARLGHA 153

Query: 154 IGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           +   G++GGQ++D++ E  ++   + +  I   KTGAL+  +  SGA +A ASQ+   R 
Sbjct: 154 VAATGLVGGQVVDLESEGAEDVTLSTLNFIHAHKTGALLEASVLSGAELAGASQDLLNRC 213

Query: 211 RCFGENLGIIFQLADDLLDC 230
             F  N+G+ FQ+ DD+LD 
Sbjct: 214 SKFARNIGLAFQIIDDVLDV 233


>gi|290474684|ref|YP_003467564.1| geranyltranstransferase [Xenorhabdus bovienii SS-2004]
 gi|289173997|emb|CBJ80784.1| geranyltranstransferase (=farnesyldiphosphate synthase)
           [Xenorhabdus bovienii SS-2004]
          Length = 305

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 125/218 (57%), Gaps = 12/218 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++D L+ T S +    +    + +  A+LGGK++R FLV     +F ++  +      A+
Sbjct: 20  VNDKLMATFSSLPFLDSPLATAMLHGAVLGGKRLRPFLVYSVGEMFGLSRESLDAPALAL 79

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKT 136
           ECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG+ L + AFEI++    P  
Sbjct: 80  ECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGESLAILAGDALQSLAFEILAKQDMPNI 139

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L D  R  ++  L    GL GM GGQ LD++ E   ID   +  I + KTGAL+C A  
Sbjct: 140 ALSD--RLAMVAELATASGLAGMCGGQSLDLEAEGKQIDLATLEQIHRHKTGALICTAVR 197

Query: 195 SGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLD 229
            GA    A Q  +E L     + + +G+ FQ+ DD+LD
Sbjct: 198 LGAY--SAGQRGREVLPLLDQYSQAIGLAFQVHDDILD 233


>gi|219854470|ref|YP_002471592.1| hypothetical protein CKR_1127 [Clostridium kluyveri NBRC 12016]
 gi|219568194|dbj|BAH06178.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 298

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 6/212 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D+ L+     +  +N ++  ++ Y+L  GGK+IR  L      ++N ++   + + AAIE
Sbjct: 20  DIYLREYMKDRGTYNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYNKDYSKVMDIAAAIE 79

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+ G+ LL  A  I+        +
Sbjct: 80  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNEAMSIMFRHCIGKGE 139

Query: 141 N-IRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGA 197
           N IR+  ++S   + G +GM+GGQ +DI  E   I   +++ +   KTGA++  +  S A
Sbjct: 140 NAIRACSIIS--ESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRKTGAIIKASIVSAA 197

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A   + E ++L+C+GE LG+ FQ+ DD+LD
Sbjct: 198 VYASTGEEEIDKLKCYGEKLGLAFQIKDDILD 229


>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
 gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
          Length = 295

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 114/197 (57%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++RY++  GGK++R  L+             AL    A+E IH YSLIHDDLP+MDN
Sbjct: 32  LHGSMRYSVFAGGKRVRPVLLLAACEAVGGALKPALPAACAMEMIHTYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG PT H  Y E TAI+AG+ LLT AF ++S     +    R +++  + H  G +
Sbjct: 92  DDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSGNGEGVDPAARLRVIHEIAHASGSR 151

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           GM+GGQM+D++ E    ID   +  I   KTGAL+  +  +GAI+  A +   + L  + 
Sbjct: 152 GMVGGQMVDMESEGKHDIDMATLSYIHTHKTGALIRASVRAGAILGGADEEAFDALTRYA 211

Query: 215 ENLGIIFQLADDLLDCE 231
           + +G+ FQ+ADD+LD E
Sbjct: 212 DAIGLAFQIADDVLDVE 228


>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 298

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 133/228 (58%), Gaps = 11/228 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L +  + +D+ LD L+   ++  +T H      A+RY+L  GGK+IR  L  E A   + 
Sbjct: 12  LAQQQRLVDSELDRLVPPESAAPETIHR-----AMRYSLFAGGKRIRPILCIEAARTVSD 66

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +         ++E IH YSLIHDDLP++DN   RRGK T H  + +  AI+AG+ LLT A
Sbjct: 67  DCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDSLLTLA 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDE--FIDETQVFMIQKMK 184
           F++++  +    D  +++L+  L    G + GM+GGQ+ D++ E    D   +  I + K
Sbjct: 127 FQVLA--QLDAPDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLETIHRAK 184

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           TGAL+  +   GAI A A++ + E L C+G+++G+ FQ+ DD+LD EE
Sbjct: 185 TGALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEE 232


>gi|153953855|ref|YP_001394620.1| Fps [Clostridium kluyveri DSM 555]
 gi|146346736|gb|EDK33272.1| Fps [Clostridium kluyveri DSM 555]
          Length = 293

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 6/212 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D+ L+     +  +N ++  ++ Y+L  GGK+IR  L      ++N ++   + + AAIE
Sbjct: 15  DIYLREYMKDRGTYNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYNKDYSKVMDIAAAIE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+ G+ LL  A  I+        +
Sbjct: 75  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNEAMSIMFRHCIGKGE 134

Query: 141 N-IRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGA 197
           N IR+  ++S   + G +GM+GGQ +DI  E   I   +++ +   KTGA++  +  S A
Sbjct: 135 NAIRACSIIS--ESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRKTGAIIKASIVSAA 192

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A   + E ++L+C+GE LG+ FQ+ DD+LD
Sbjct: 193 VYASTGEEEIDKLKCYGEKLGLAFQIKDDILD 224


>gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N]
 gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N]
          Length = 303

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 11/205 (5%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNH-LTAL-----RVGAAIECIHCYSLIHD 90
           RL  A+RYA+LGG K++R+ LV        VN  L A+     R  AA+E IH YSL+HD
Sbjct: 36  RLHEAMRYAVLGGGKRVRAALVYAAGQACPVNSSLLAIEASMDRAAAAVELIHAYSLVHD 95

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP MD+  +RRG+PT H+Q+DE TA++AG+ L   AFE+++     +   +  Q    L
Sbjct: 96  DLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELLAG--MPIAPALVVQATQVL 153

Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G  GM GGQ +D+    + +   ++  +  MKTGA++  +   G ++A AS   ++
Sbjct: 154 ARAAGSLGMAGGQAIDLHSVGKRLTRDELQTMHSMKTGAMLAASVTLGGVVAGASSAVRQ 213

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  + + +G+ FQ+ DD+LD   D
Sbjct: 214 ALDAYAQAVGLAFQVVDDILDVTAD 238


>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
          Length = 383

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 121/202 (59%), Gaps = 7/202 (3%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ +R+  A+RY+LL GGK++R  L      L       A+    A+E IH  SLIHDDL
Sbjct: 113 RYPERIHEAMRYSLLAGGKRVRPVLCISACELVGGTEEVAMPTACAMEMIHTMSLIHDDL 172

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSL 150
           P MDN   RRGKPT H  + E TAI+AG+ LL++AFE   +S+ K+   D I  +++  L
Sbjct: 173 PCMDNDDFRRGKPTNHKVFGEGTAILAGDALLSFAFEHIAVSTSKSVGTDRIL-RVVSEL 231

Query: 151 THNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              IG QG++GGQ+ DI    D  +D   +  I   KT  L+  +   GAI++ AS NE 
Sbjct: 232 GRTIGSQGLVGGQVADITSEGDASVDLDTLEWIHIHKTAVLLECSVMCGAIISGASDNEI 291

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           ER++ +  ++G++FQ+ DD+LD
Sbjct: 292 ERIQRYARSVGLLFQVVDDILD 313


>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
 gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
 gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Geobacillus kaustophilus HTA426]
          Length = 297

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y+L  GGK+IR  L+         +    L V  AIE IH YSLIHDDLPSMDN
Sbjct: 34  LKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDN 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPT H  + E  AI+AG+ LLTYAF++I+     ++  ++R QL+  L    G 
Sbjct: 94  DDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGP 153

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+ GQ  D++ E   +   ++  I + KTG ++ ++  +GA++  A   +   L  F 
Sbjct: 154 EGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFA 213

Query: 215 ENLGIIFQLADDLLDCE 231
            +LG+ FQ+ DD+LD E
Sbjct: 214 AHLGLAFQIRDDILDIE 230


>gi|297621395|ref|YP_003709532.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044]
 gi|297376696|gb|ADI38526.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044]
          Length = 294

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/202 (44%), Positives = 125/202 (61%), Gaps = 4/202 (1%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A RYALLGG K+IR  L    A LFN +   AL    AIE IH YS+IHDDLP MD+
Sbjct: 33  LYEAARYALLGGGKRIRPILTLATAKLFNADIEAALVPACAIEMIHTYSVIHDDLPCMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGKP++H Q++E  A++ G+ LLT AFE+IS  + QL   ++  L+ ++    G +
Sbjct: 93  DDFRRGKPSLHKQFNEALAVLTGDFLLTRAFEVISEDR-QLNVEMQIDLIRTIACASGGK 151

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ++DI  E   +D  Q+  +   KTGAL+  A E G I+A AS  E++    F +
Sbjct: 152 GMIGGQVIDISSEGKGLDLKQLQHLHAKKTGALITAAVECGCIVASASDEERQPALQFAQ 211

Query: 216 NLGIIFQLADDLLDCEEDLPKK 237
           ++G+ FQ+ DDLLD    + K+
Sbjct: 212 DIGLAFQIVDDLLDITSGVKKR 233


>gi|329725410|gb|EGG61893.1| geranyltranstransferase [Staphylococcus epidermidis VCU144]
 gi|329735348|gb|EGG71640.1| geranyltranstransferase [Staphylococcus epidermidis VCU045]
          Length = 298

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 35  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 95  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHL 153

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 154 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 213

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 214 HLGMMFQIKDDLLDVYGDESK 234


>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
 gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
          Length = 316

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 130/231 (56%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L +  + ++  LD       + +   + +++  ++RY+L+ GGK++R  L      
Sbjct: 26  LSTYLSQKKELVEAALD-------AAIAVTYPEKIYESMRYSLMAGGKRLRPILCLATCE 78

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+GL
Sbjct: 79  LLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGL 138

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           L+YAFE +++    +      Q++  L   +G  G++GGQ++D+  E    I E  +  I
Sbjct: 139 LSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLTFI 198

Query: 181 QKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+  C  C  GAI+A A++ + ERL  + +N+G+ FQ+ DD+LD
Sbjct: 199 HTHKTGALLEACVVC--GAILAGANETDLERLSRYAKNIGLAFQIVDDILD 247


>gi|57867011|ref|YP_188659.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
 gi|293366522|ref|ZP_06613199.1| geranyltranstransferase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|57637669|gb|AAW54457.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
 gi|291319291|gb|EFE59660.1| geranyltranstransferase [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 293

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 30  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 90  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVSIIKRLSKASGHL 148

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 149 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 209 HLGMMFQIKDDLLDVYGDESK 229


>gi|285019214|ref|YP_003376925.1| geranylgeranyl pyrophosphate synthase [Xanthomonas albilineans GPE
           PC73]
 gi|283474432|emb|CBA16933.1| putative geranylgeranyl pyrophosphate synthase protein [Xanthomonas
           albilineans]
          Length = 293

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 121/221 (54%), Gaps = 9/221 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++  LD  L   A     Q   RL +A+R+A LGG K++R  LV    +LF  +    
Sbjct: 12  QRVEAGLDAHLPAIA-----QAPQRLHAAMRHATLGGGKRMRPLLVYASGALFGTDPARL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                A+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L + AFE+++
Sbjct: 67  DAPALAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQSLAFELLA 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMC 190
                    +R Q + +L    G  GM GGQ LDI    I +    +  +  +KTGAL+ 
Sbjct: 127 K-ADAADATLRVQWLQTLAEATGAAGMCGGQALDIDATGIVQPLADLQRMHALKTGALIR 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +   GA+   A       L  F   LG+ FQ+ DD+LD E
Sbjct: 186 ASVRLGALGGGADHAALNHLDAFASALGLAFQIRDDILDVE 226


>gi|225377100|ref|ZP_03754321.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
           16841]
 gi|225211005|gb|EEG93359.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
           16841]
          Length = 303

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 10/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +++Q     I+ I+   L +     +T     ++ A+ Y++L GGK++R  L++E   LF
Sbjct: 12  AEIQTRVDEIEQIIKRYLPEEEGWQKT-----IMEAMNYSILAGGKRLRPMLMSETYRLF 66

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                      AA+E IH YSL+HDDLP+MDN   RRGK T H  Y E   I+AG+ LL 
Sbjct: 67  GGKSKVIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLN 126

Query: 126 YAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQ 181
           YAFE  +       DN    + M  L    G+ GM+GGQ++D+Q E    I + ++  I 
Sbjct: 127 YAFETAAKAFDMEPDNRNIGKAMQILATKAGIYGMVGGQVVDVQSEDSGDITKEKLDFIY 186

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           ++KTGAL+  +   GA++A A++NE+  +      +G+ FQ+ DD+LD 
Sbjct: 187 RLKTGALIESSMLIGAVLAGATKNEQNTIEKAATEVGLAFQIQDDILDV 235


>gi|6016394|sp|O66126|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
          Length = 291

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/197 (44%), Positives = 117/197 (59%), Gaps = 5/197 (2%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  AI Y+L  GGK+IR  LV         N    L  G A+E IH YSLIHDDLP+MD
Sbjct: 30  RLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIHTYSLIHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGK T H ++DE TAI+AG+ LLT AF+ I +  TQL   I+  L+  L+   G 
Sbjct: 90  NDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCILN--TQLNAEIKLSLINLLSTASGS 147

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQMLD+Q E    T  ++  I   KTG L+  A  S  I+ + +  + E+L   G
Sbjct: 148 NGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGIIMNFNDAQIEQLNIIG 207

Query: 215 ENLGIIFQLADDLLDCE 231
           +N+G++FQ+ DD+LD E
Sbjct: 208 KNVGLMFQIKDDILDVE 224


>gi|316985189|gb|EFV64141.1| putative geranyltranstransferase [Neisseria meningitidis H44/76]
 gi|325135064|gb|EGC57692.1| geranyltranstransferase [Neisseria meningitidis M13399]
 gi|325141097|gb|EGC63600.1| geranyltranstransferase [Neisseria meningitidis CU385]
 gi|325199464|gb|ADY94919.1| geranyltranstransferase [Neisseria meningitidis H44/76]
          Length = 298

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 113/196 (57%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G +GM 
Sbjct: 99  RRGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMA 157

Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +      Q  + Q   +KTGAL+  A   GA      S  E   L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|257125255|ref|YP_003163369.1| polyprenyl synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049194|gb|ACV38378.1| Polyprenyl synthetase [Leptotrichia buccalis C-1013-b]
          Length = 296

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 140/243 (57%), Gaps = 15/243 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L   L++  K ++  L +LL     + + ++ ++L  A+ YA++ GGK+IR  L+     
Sbjct: 2   LREYLEDKKKIVEGNLKELL----GNYENKYPEKLSEAMEYAVMNGGKRIRPILMYMICD 57

Query: 64  LFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           LF  N+  +      + AA+E IHCYSL+HDDLP+MDN   RRGK TVH +Y+E   ++ 
Sbjct: 58  LFEKNNCKSYDKIKEIAAALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLV 117

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ LLT AF II++ K+ L D  + +++  L+   G  GM+GGQ +D++ E   ++   +
Sbjct: 118 GDVLLTEAFGIIANSKS-LGDKNKIEIISKLSEYAGFFGMVGGQFVDMESENKKVEIDTL 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTG L+  A E   I       ++E++  + + LGI FQ+ DD+LD E   E++
Sbjct: 177 KYIHAHKTGKLLTAAIELPMIALDIESEKREKMVEYSKLLGIAFQIKDDILDIEGNFEEI 236

Query: 235 PKK 237
            KK
Sbjct: 237 GKK 239


>gi|331091277|ref|ZP_08340118.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330404724|gb|EGG84263.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 296

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 5/201 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           H ++++ A+ Y L+ GGK+IR  L+ E   +F           AAIE IH YSLIHDDLP
Sbjct: 28  HQEKIMEAMEYNLMAGGKRIRPMLMKETYEMFGGTGKIIEPFMAAIEMIHTYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLT 151
           +MDN   RRG+ T HI Y E   I+AG+ LL YAFE  S      +DN  +  + +  L 
Sbjct: 88  AMDNDDYRRGRKTTHIVYGEAMGILAGDALLNYAFETASEAFDMDRDNGYLIGKALQILG 147

Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G+ GM+GGQ++D+    + +D+  +  I  +KTGAL+  +   GAI+A A++ E + 
Sbjct: 148 RKAGIYGMIGGQVVDVAASGKAVDKDVLDFIYDLKTGALIEASMMIGAILAGATEQEVKI 207

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           +    + +G+ FQ+ DD+LD 
Sbjct: 208 IESAAKKVGLAFQIQDDILDV 228


>gi|296313727|ref|ZP_06863668.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768]
 gi|296839651|gb|EFH23589.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768]
          Length = 298

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 118/199 (59%), Gaps = 5/199 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN
Sbjct: 36  LHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDN 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT H++Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G +
Sbjct: 96  DSLRRGKPTCHVKYGEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSR 154

Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFG 214
           GM GGQ +D+ +    + +  +  +  +KTGAL+  A   GA+   + S++    L  + 
Sbjct: 155 GMAGGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYA 214

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG+ FQ+ DD+LDCE D
Sbjct: 215 AKLGLAFQVIDDVLDCEAD 233


>gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
           15053]
 gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
           15053]
          Length = 300

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 20/231 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           K+QE    I+T+L D L +     Q  +   ++ A+ Y+LL GGK++R  L+ E   LFN
Sbjct: 14  KVQE----IETVLQDYLPR-----QKGYQSIIMEAMSYSLLAGGKRLRPMLMKETYDLFN 64

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                     AAIE IH YSL+HDDLP+MDN   RRG+ T H+ Y E   I+AG+ LL Y
Sbjct: 65  GRSKALKPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRRTTHVVYGEDMGILAGDALLNY 124

Query: 127 AFE-----IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179
           AFE      ++ P+  L   +  + +  L    G+ GM+GGQ++D+++   D ++  +  
Sbjct: 125 AFETAFKAFVTEPEDSL---LIGRALGVLGEKAGIYGMIGGQVIDVRETGRDISKEVLDT 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           I ++KT AL+  A   GAI+  AS+ E + +     N+GI FQ+ DD+LD 
Sbjct: 182 IYELKTAALIESAMMIGAILGGASEEEVKAVEQIAGNVGIAFQIQDDILDV 232


>gi|126736181|ref|ZP_01751924.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
 gi|126714347|gb|EBA11215.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
          Length = 302

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 128/201 (63%), Gaps = 17/201 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +A+ YA  GGK +R+FL  E A +  +N + A    AAIECIH YSL+HDDLP MD+  +
Sbjct: 46  AAMLYAASGGKALRAFLALETARMLGINPVAAAGAAAAIECIHAYSLVHDDLPCMDDDDL 105

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGL 156
           RRG+PTVH ++D+ TA++AG+GL   AFE++     +P+ +L       L++SL++  G+
Sbjct: 106 RRGQPTVHQKWDQATAVLAGDGLQALAFELLIQAECAPRAKLN------LLMSLSNAAGV 159

Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           +GM+GGQ  DI  E     +D  Q+  +Q  KTGAL+ ++   G  MA   + E+E L  
Sbjct: 160 RGMVGGQAADIAAETAAVPLDLEQIMDLQASKTGALISWSALVGPRMA---ETEREPLSI 216

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G NLG+ FQ+ADD+LD   D
Sbjct: 217 YGANLGLAFQIADDVLDATGD 237


>gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2]
 gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2]
          Length = 294

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 114/187 (60%), Gaps = 9/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+T   + F+ +  L   +  AA+E IH YSLIHDDLP+MD+  +RRGKPT 
Sbjct: 40  GGKRIRPLLLTATVASFHKSMTLGVYQTAAALEMIHTYSLIHDDLPAMDDDALRRGKPTN 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  Y E  AI+AG+GLLT AF+++S     L+ + +  L+  L+H  G  GM+ GQ  DI
Sbjct: 100 HKVYGEALAILAGDGLLTAAFQLLS--LADLEPDKKILLLQQLSHTAGTAGMVAGQAADI 157

Query: 168 QDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           Q E     +DE  +  I + KTG L+ FA  +G I+A  ++   + L  F  ++G+ FQ+
Sbjct: 158 QGENQQLTLDE--LISIHERKTGELIRFAVIAGGILADQTEEVIQLLDQFARHMGLAFQI 215

Query: 224 ADDLLDC 230
            DDLLD 
Sbjct: 216 RDDLLDV 222


>gi|238783627|ref|ZP_04627648.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
 gi|238715505|gb|EEQ07496.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
          Length = 306

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 7/197 (3%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMD 96
           L+ A+RY A+LGGK++R +LV     +F ++ LTAL    AAIECIH YSLIHDDLP+MD
Sbjct: 39  LVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTALDAPAAAIECIHAYSLIHDDLPAMD 97

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIG 155
           N  +RRG+PT HI++ E  AI+AG+ L T AF I++  +   + D  R  ++  L H  G
Sbjct: 98  NDDLRRGQPTCHIKFGEANAILAGDALQTLAFTILAEAEMPDVADKDRLAMVAELAHASG 157

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRC 212
           + GM GGQ LD++ E   I   ++  I + KTGAL+  A   GA+ A A        L  
Sbjct: 158 VAGMCGGQALDLEAEARQISLAELEQIHRHKTGALIRAAVRLGALAAGARGRAALPLLDR 217

Query: 213 FGENLGIIFQLADDLLD 229
           + E +G+ FQ+ DD+LD
Sbjct: 218 YAEAIGLAFQVQDDILD 234


>gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 305

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 128/226 (56%), Gaps = 15/226 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
           Q   + I+  L+ L  +  SHM  Q    L  A RY+LLGG K+IR  L           
Sbjct: 19  QAALQHIEACLEKLFPE--SHMPYQ---SLFDAARYSLLGGGKRIRPLLSLAVTQALTGT 73

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A++   A+E IH YSL+HDDLPSMDN   RRGKP++H  + E  AI+ G+ LLTYAF
Sbjct: 74  FTQAIQPACALELIHTYSLVHDDLPSMDNDDFRRGKPSLHKVFPEGHAILTGDFLLTYAF 133

Query: 129 EII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKM 183
           E++ SSP    +  +  +L+  L  + G  GM+ GQ++DI    Q   +D  Q   I + 
Sbjct: 134 EVLCSSPGLTAQQIV--ELVALLAKSAGGHGMIAGQIMDISAVNQTLTLDNLQ--HIHQT 189

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTGAL+  A E GAI++  +  E+  L+ FG  +G+ FQ+ DD+LD
Sbjct: 190 KTGALITCAVEFGAIVSGCAPVERALLQQFGNEIGLAFQIIDDVLD 235


>gi|116333612|ref|YP_795139.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
           367]
 gi|116098959|gb|ABJ64108.1| farnesyl-diphosphate synthase [Lactobacillus brevis ATCC 367]
          Length = 300

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 120/201 (59%), Gaps = 7/201 (3%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDD 91
           H+ +L +A+ Y++L GGK++R  L         V  +     R   A+E +H YSLIHDD
Sbjct: 31  HDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTYSLIHDD 90

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MDN  +RRG+PT H+++    A +AG+GLLT AF+ +++  T L   +++ L+ +L 
Sbjct: 91  LPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTA--TDLPATMQAALVQALA 148

Query: 152 HNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM+ GQ  DIQ E ++   +Q+ ++ K KTGAL+ +A ++G I+  A + +   
Sbjct: 149 TAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPA 208

Query: 210 LRCFGENLGIIFQLADDLLDC 230
              F +  G+ FQ+ DD+LD 
Sbjct: 209 YLQFADAFGLAFQIYDDILDV 229


>gi|254464346|ref|ZP_05077757.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I]
 gi|206685254|gb|EDZ45736.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I]
          Length = 294

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/223 (40%), Positives = 131/223 (58%), Gaps = 12/223 (5%)

Query: 20  LDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           L D   +  +HM+ +    D L +A+RYA+ GGK +R FLV E A L  V    A+    
Sbjct: 16  LKDAQARITAHMEARLAGGDDLHAAMRYAITGGKMLRGFLVLESARLHGVPAEAAIEAAL 75

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIECIH YSL+HDDLP MD+  +RRG+PTVH ++DE  A++AG+ L ++AFE+++ P   
Sbjct: 76  AIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQSFAFELLADPSVG 135

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFAC 193
                   L+  L  + G  GM+ GQMLDI  E   E     ++  +Q  KTG L+ ++ 
Sbjct: 136 PHALT---LIRGLAQSSGKDGMVSGQMLDIAAETATEPLTLKEITRLQGRKTGCLIEWSA 192

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +GA++A A   +   LR +   LG+ FQ+ADD+LD E D  K
Sbjct: 193 TAGAVLAGA---DPAPLRQYASALGLAFQIADDILDVEGDAAK 232


>gi|218660042|ref|ZP_03515972.1| geranyltranstransferase protein [Rhizobium etli IE4771]
          Length = 194

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/145 (50%), Positives = 108/145 (74%), Gaps = 1/145 (0%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L+ N++ I+ +L  LL   A   +    + L SA+ YA+L GGK++R FLV E A+L 
Sbjct: 10  TRLKNNAREIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVESAALL 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+ LLT
Sbjct: 70  GGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGDSLLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSL 150
           YAF+I+++P+T L D  ++ L+L+L
Sbjct: 130 YAFDIVAAPETALPDASKASLVLAL 154


>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
          Length = 296

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 118/197 (59%), Gaps = 5/197 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++ A+ Y+L+ GGK++R  L+ E   LF           AA+E IH YSL+HDDLP+MDN
Sbjct: 32  IMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFMAAMEMIHTYSLVHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDNIR-SQLMLSLTHNIG 155
              RRG+ T HI Y E   I+AG+ LL YAFE       Q  ++++R  Q M  L    G
Sbjct: 92  DEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFEQFPEESLRIGQAMRVLARKAG 151

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + GM+GGQ++D+++    IDE  +  I ++KTGAL+  A   GAI+A AS+ + + ++  
Sbjct: 152 IYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESAMMIGAILAGASKEDVKSMQKI 211

Query: 214 GENLGIIFQLADDLLDC 230
              +G+ FQ+ DD+LD 
Sbjct: 212 AGKIGMAFQIQDDILDV 228


>gi|153802298|ref|ZP_01956884.1| geranyltranstransferase [Vibrio cholerae MZO-3]
 gi|124122180|gb|EAY40923.1| geranyltranstransferase [Vibrio cholerae MZO-3]
          Length = 294

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 130/239 (54%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G+QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGDLSAAGETQRVAMIQALAEASGVQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|242242790|ref|ZP_04797235.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
 gi|242233926|gb|EES36238.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
 gi|319400858|gb|EFV89077.1| geranyltranstransferase [Staphylococcus epidermidis FRI909]
          Length = 288

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 25  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG+ T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 85  DDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSND-TTIEDSVKVNIIQRLSKASGHL 143

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I K KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 144 GMVGGQALDMESEGKSIRLETLESIHKTKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 204 HLGMMFQIKDDLLDVYGDESK 224


>gi|85058635|ref|YP_454337.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans']
 gi|84779155|dbj|BAE73932.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans']
          Length = 300

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 118/202 (58%), Gaps = 9/202 (4%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+R+ ALLGGK++R FLV +   LF +   +     AAIECIH YSLIHDDLP+MDN
Sbjct: 33  LIQAMRHGALLGGKRLRPFLVYQTGRLFGLTAASLDAPAAAIECIHAYSLIHDDLPAMDN 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154
             +RRG PT H+++ E TAI+AG+ L T AF I++    PK   +D  R Q++ +L    
Sbjct: 93  DALRRGLPTCHVKFGETTAILAGDALQTLAFSILADVEMPKVSPQD--RLQMISALAAAS 150

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LR 211
           G  GM  GQ LD++ E   +   ++  I + KTGAL+  A   G + A        R L 
Sbjct: 151 GADGMCLGQALDLEAEGQQVSAARLETIHRHKTGALIRSAVRMGVLAAGERGGPALRYLD 210

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            F   +G+ FQ+ DD+LD   D
Sbjct: 211 RFAAAIGLAFQVQDDILDVVGD 232


>gi|126730373|ref|ZP_01746184.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37]
 gi|126709106|gb|EBA08161.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37]
          Length = 302

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/199 (42%), Positives = 126/199 (63%), Gaps = 9/199 (4%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + +A+RYA+ GGK +R+F+V E A LF+++   A     AIE +H YSL+HDDLP MD+ 
Sbjct: 44  VAAAMRYAVEGGKALRAFMVIEGARLFDIDRQHAAPAAGAIEALHAYSLVHDDLPCMDDD 103

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRGKPTVH ++DE TA++AG+ L   AF++++   T    + R +L+  L    GL+G
Sbjct: 104 DMRRGKPTVHRKWDETTAVLAGDALQALAFQLVT--HTACPADRRLELVAGLATAAGLRG 161

Query: 159 MLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+GGQ  DI  E         ++  +Q  KTGAL+ ++C +GA+MA  S      LR +G
Sbjct: 162 MVGGQARDIAAESAQTPLTLEEITALQAGKTGALISWSCGAGAVMAGQSTGP---LRRYG 218

Query: 215 ENLGIIFQLADDLLDCEED 233
           + LG+ FQ+ DD+LD E D
Sbjct: 219 DCLGLAFQIWDDVLDVEGD 237


>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
 gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
          Length = 294

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 11/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L+E    ID++L      T    + +   +L  A++Y+L +GGK++R  L      
Sbjct: 3   LKAYLKERKALIDSVL-----LTYLPPEPEFGKKLYEAVKYSLTVGGKRLRPILCLAGCE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   N   AL    AIE IH YSLIHDDLP+MDN  +RRG PT  +++ E TAI+AG+ L
Sbjct: 58  IVGGNRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           L  AFE+++    +   N + +++  +    G+ GM+ GQ  D+  E    +   ++  I
Sbjct: 118 LNRAFEVLAD--WEFDCNRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLFI 175

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            K KTG L+  +  SG I    S  E + LR +G++LG+ FQ+ DD+LD   D  K
Sbjct: 176 HKHKTGRLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEK 231


>gi|310689999|pdb|3P8R|A Chain A, Crystal Structure Of Polyprenyl Synthase From Vibrio
           Cholerae
          Length = 302

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 12  ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 63  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 122

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 123 LQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELET 182

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 183 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 237


>gi|237756447|ref|ZP_04584985.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691395|gb|EEP60465.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 287

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/221 (41%), Positives = 132/221 (59%), Gaps = 15/221 (6%)

Query: 20  LDDLLLQTASHMQTQHN--------DRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVN 68
             D+L + AS +  Q +        + L +A+RY+L  GGK+IR  LV E A     +VN
Sbjct: 3   FKDILKEKASFINKQLDRFVPNCIPEELSNAMRYSLEAGGKRIRPILVIESAKAVKEDVN 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +  + E IH YSLIHDDLP+MD+  +RRGKPT H  + E  AI+AG+GLLTYAF
Sbjct: 63  VEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTYAF 122

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E+IS+ K    + I   + + L+HN+G+ GM+GGQ  DI   F D   V  I   KT   
Sbjct: 123 EVISNNKKLSAEKIVKVINI-LSHNVGIYGMVGGQAADILPNFKD---VEFIHLNKTAKF 178

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +   C+ G ++A A++ E  +L+ +G N+G+ FQ+ DD+LD
Sbjct: 179 LSACCQIGGVLADATEEEILKLKNYGINIGLAFQIWDDILD 219


>gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862]
          Length = 287

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 121/220 (55%), Gaps = 7/220 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           KL E S  +   ++D L    +H  +  N  +  A+ YA++ GGK++R  L    A  + 
Sbjct: 2   KLSEFSATVVPQIEDKLAAELAH--STSNQTMRDAMTYAVMAGGKRLRPLLTLAVAQSYG 59

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +     LR  +A+E IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ L   
Sbjct: 60  LGINGLLRAASALELIHTYSLIHDDLPAMDNDDMRRGKPTTHKAFGEDVAILAGDALQPL 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM 183
           A++ ++S    L    +++L L L    G  GM+ GQ++D+       I   QV  I   
Sbjct: 120 AYQWLASDPL-LTTPQKAELTLQLALASGADGMVAGQVMDMAATNAATISLDQVKAIHYR 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           KTGAL+ +A  +G IMAHAS   KE L  FG   G+ FQ+
Sbjct: 179 KTGALIAYAAIAGGIMAHASDEVKETLWNFGMAYGLAFQI 218


>gi|34498146|ref|NP_902361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
 gi|34104001|gb|AAQ60361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
          Length = 298

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 120/200 (60%), Gaps = 4/200 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA L GGK++R  LV     L         R+GAA+E +H YSL+HDD+P MD
Sbjct: 34  RLHEAMRYATLEGGKRVRPLLVFAAGELVGAQADNLARIGAALEMVHAYSLVHDDMPCMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT HI YD+ TA++ G+ L T AFE+IS P   +    + +++ +L H  G 
Sbjct: 94  NDVLRRGKPTCHIAYDDATALLVGDALQTRAFELISQPMPDIAPASQLEMVRALAHAAGH 153

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ +D+    +  T  ++  +  +KTGAL+  A  +G++     S  EKE L  F
Sbjct: 154 AGMAGGQAIDLASVGLPLTLPELEFMHMLKTGALIRAAVLAGSMAGRELSAAEKEALDAF 213

Query: 214 GENLGIIFQLADDLLDCEED 233
            + +G+ FQ+ DD+LDCE D
Sbjct: 214 AKRIGLAFQVVDDILDCEAD 233


>gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88]
 gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88]
          Length = 288

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 127/218 (58%), Gaps = 5/218 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D  L+     +  +N  +  A+ Y++ +GGK+IR  L      ++N N+  AL +  AIE
Sbjct: 11  DTWLKEYFKDKGTYNKSVYEAMSYSVNIGGKRIRPILALITYKIYNKNYKEALSIACAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP MD+  +RRGKPT H  + +  A++AG+GLL  AF II     Q K 
Sbjct: 71  MIHTYSLIHDDLPCMDDD-LRRGKPTNHKVFGDGLAVLAGDGLLNEAFNIILKNGCQ-KG 128

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198
               +    +    G++GM+GGQ++D+   ++ I+  ++  I + KT AL+  +  +GAI
Sbjct: 129 MTWVEAGYEIGKASGVEGMIGGQVVDVLNTNKSIEIEELDYIHEKKTAALITASIMTGAI 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  A++ +   L+ FG+ LG+ FQ+ DD+LD E D  K
Sbjct: 189 LGEANEKDTTILKEFGKKLGLAFQIKDDILDIESDTRK 226


>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L]
 gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L]
          Length = 309

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 124/227 (54%), Gaps = 15/227 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E    I++ LD  L +          D++  A+RY+LL GGK++R  L      L   
Sbjct: 23  LKERKALIESALDQALPR-------MEPDKIYEAMRYSLLAGGKRLRPILCLATCELMGG 75

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+    A+E IH  SLIHDDLP+MDN   RRGK T H  + E  AI+AG+GLL YA
Sbjct: 76  TVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYA 135

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184
           FE  ++    +      Q++  L   +G  G++GGQ+LD++ E    I E  +  I   K
Sbjct: 136 FEYAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSFIHTHK 195

Query: 185 TGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           TGAL+  C  C  G I+A A+    +RL  + +N+G+ FQ+ DD+LD
Sbjct: 196 TGALLEACVVC--GGILAGATAANLQRLSKYAQNIGLAFQIVDDILD 240


>gi|229530007|ref|ZP_04419397.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae 12129(1)]
 gi|229333781|gb|EEN99267.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae 12129(1)]
          Length = 294

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|153830561|ref|ZP_01983228.1| geranyltranstransferase [Vibrio cholerae 623-39]
 gi|148873959|gb|EDL72094.1| geranyltranstransferase [Vibrio cholerae 623-39]
          Length = 294

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|329298746|ref|ZP_08256082.1| polyprenyl synthetase [Plautia stali symbiont]
          Length = 299

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 118/200 (59%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A++Y ALLGGK++R FLV     +      +     AA+ECIH YSLIHDDLP+MD+
Sbjct: 32  LVNAMQYGALLGGKRLRPFLVYATGEMLRAEAASLDAPAAAVECIHAYSLIHDDLPAMDD 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI+Y E TAI+AG+ L T AF I++  P   +    R  ++  L    G+
Sbjct: 92  DALRRGQPTCHIKYGEDTAILAGDALQTLAFTILADQPMPGVSPQDRIAMISELAQASGV 151

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213
            GM  GQ LD+  E   +D  Q+  I + KTGAL+  A   GA+ A A+  +   +L  +
Sbjct: 152 AGMCCGQALDLAAEGKSVDLNQLEQIHRHKTGALIRAAVRLGALTAGAAGRDALPQLDIY 211

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 212 ANAIGLAFQVQDDILDVVGD 231


>gi|71892019|ref|YP_277749.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|71796125|gb|AAZ40876.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 306

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 131/240 (54%), Gaps = 11/240 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
             ++L+E+ +R+D  +   L+        Q    L+ AIRY+ LLGGK++R FLV +   
Sbjct: 6   FANELRESHQRVDEAISRYLIM----FLKQDVSLLMQAIRYSVLLGGKRLRPFLVYQTGK 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF +         AAIECIH YSLIHDDLP MDN  +RRG PT H+++ E  A++AG+ L
Sbjct: 62  LFGIRSSNLNAPAAAIECIHAYSLIHDDLPIMDNDKLRRGHPTCHVKFGESIAVLAGDAL 121

Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179
            T AF I+S      + D  R +++ +L    G  GM  GQ LD+    ++ I  TQ+  
Sbjct: 122 HTLAFTILSEAHMPTITDQDRLKMIATLASASGANGMCLGQSLDLINKNNKNISATQLET 181

Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           I + KTG+L+  A   GA+ A   +  +    L  +   +G+ FQ+ DD++D      +K
Sbjct: 182 IYQYKTGSLIRAAVRIGALAAGNKSCDDVLSFLDHYATTIGLAFQIQDDIIDISHAYDQK 241


>gi|317492932|ref|ZP_07951356.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919054|gb|EFV40389.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 301

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 5/206 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + +L++A+RY ALLGGK++R +LV     +F ++        AA+ECIH YSL+HDDLP+
Sbjct: 30  DGQLVAAMRYGALLGGKRLRPYLVYATGEMFGLSLDNLDAPAAAVECIHAYSLMHDDLPA 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT HI++ E  AI+AG+ L T AF I++ SP   +  + R  ++  L   
Sbjct: 90  MDDDNLRRGQPTSHIKFGEAHAILAGDALQTLAFSILADSPMPDVAVSDRLAMLSELAQA 149

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210
            G+ GM GGQ LD++ E  ++D   +  I   KTGAL+  A   GA+ A    +     L
Sbjct: 150 SGVAGMCGGQALDLEAEGKYVDLQSLERIHNHKTGALIRCAIRMGALAAGDTGRAALPLL 209

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
             +   +G+ FQ+ DD+LD   D  K
Sbjct: 210 DRYAAAIGLAFQVQDDILDVIGDSEK 235


>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
 gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
 gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
 gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
 gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
 gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
 gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
 gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
 gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
 gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
 gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
 gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile]
 gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
 gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
          Length = 295

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 131/233 (56%), Gaps = 11/233 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+E +  ++ +L + + +   + +T     ++ A+ Y+L  GGK++R  L  E   +   
Sbjct: 7   LKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEACKIVGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   A+    AIE IH YSLIHDDLP++DN  +RRG+PT H  Y E   I+AG+ LL YA
Sbjct: 62  NEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYA 121

Query: 128 FEIISSPKTQLKDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           FE++ +     K+N    L  +  +    G+ GM+GGQ++D++ E   I++ ++  I   
Sbjct: 122 FEVMLAGSIN-KENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KT A+M     +GA +  A+  + E +  + +N+G+ FQ+ DD+LD   D  K
Sbjct: 181 KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAK 233


>gi|153827049|ref|ZP_01979716.1| geranyltranstransferase [Vibrio cholerae MZO-2]
 gi|229513011|ref|ZP_04402477.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TMA 21]
 gi|229525505|ref|ZP_04414910.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae bv. albensis VL426]
 gi|254225115|ref|ZP_04918729.1| geranyltranstransferase [Vibrio cholerae V51]
 gi|262191492|ref|ZP_06049677.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae CT 5369-93]
 gi|297581274|ref|ZP_06943198.1| geranyltranstransferase [Vibrio cholerae RC385]
 gi|125622502|gb|EAZ50822.1| geranyltranstransferase [Vibrio cholerae V51]
 gi|149739090|gb|EDM53386.1| geranyltranstransferase [Vibrio cholerae MZO-2]
 gi|229339086|gb|EEO04103.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae bv. albensis VL426]
 gi|229349904|gb|EEO14858.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TMA 21]
 gi|262032640|gb|EEY51193.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae CT 5369-93]
 gi|297534590|gb|EFH73427.1| geranyltranstransferase [Vibrio cholerae RC385]
 gi|327483628|gb|AEA78035.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4]
          Length = 294

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|325920751|ref|ZP_08182657.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865]
 gi|325548803|gb|EGD19751.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865]
          Length = 291

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 123/197 (62%), Gaps = 5/197 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+R+A+LGG K++R  LV    +LF+ +  +      A+E IH YSL+HDDLP+MD
Sbjct: 30  RLHAAMRHAVLGGGKRMRPLLVYATGALFDADEDSLDTPAVAVELIHAYSLVHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVHI +DE TAI+AG+ L T AFE++++    +  ++R   + SL    G 
Sbjct: 90  DDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAA--ASVSADLRVGWLQSLASAAGA 147

Query: 157 QGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM GGQ LDI    +    + +  +  +KTGAL+  A   GA+   A+  +++RL  F 
Sbjct: 148 AGMCGGQALDIDATGQLQSLSDLERMHALKTGALIRAAVRMGALTGGAAHADQQRLDAFA 207

Query: 215 ENLGIIFQLADDLLDCE 231
           + LG+ FQ+ DD+LD E
Sbjct: 208 DALGLAFQVRDDILDVE 224


>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
 gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
          Length = 298

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 8/227 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
           T LD + ++    +       L  A+RY +L GGK++R  LV   A   + +   ALR  
Sbjct: 12  TALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALRAA 71

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E IH YSLIHDD+P MDN  +RRGKPTVH+QY E  A++AG+ +   AFE+++   T
Sbjct: 72  CAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPEDT 131

Query: 137 Q--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFA 192
              +   ++++L   L    G+ GM GGQ +D+    + +DE  +  +   KTGAL+  +
Sbjct: 132 DDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTGALLQAS 191

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
              GA     +  + + L  +G  +G+ FQ+ DD+LD   C E L K
Sbjct: 192 VLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQCAETLGK 238


>gi|229523313|ref|ZP_04412720.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TM 11079-80]
 gi|229339676|gb|EEO04691.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TM 11079-80]
          Length = 294

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
 gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
 gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
 gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
 gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
          Length = 295

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 131/233 (56%), Gaps = 11/233 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+E +  ++ +L + + +   + +T     ++ A+ Y+L  GGK++R  L  E   +   
Sbjct: 7   LKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEACKIVGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   A+    AIE IH YSLIHDDLP++DN  +RRG+PT H  Y E   I+AG+ LL YA
Sbjct: 62  NEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYA 121

Query: 128 FEIISSPKTQLKDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           FE++ +     K+N    L  +  +    G+ GM+GGQ++D++ E   I++ ++  I   
Sbjct: 122 FEVMLAGSIN-KENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMN 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KT A+M     +GA +  A+  + E +  + +N+G+ FQ+ DD+LD   D  K
Sbjct: 181 KTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESK 233


>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 288

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 4/200 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q+ +++  A+RY+LL GGK++R  L      L   N   ++    A+E +H  SLIHDDL
Sbjct: 19  QYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMPAACAMEMVHTMSLIHDDL 78

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E TA++AG+ LLTYAFE I+   T +  +   +++  L  
Sbjct: 79  PCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARDTTGVPADRVLRVIAHLGK 138

Query: 153 NIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            +G +G++ GQ++DI    D  +    +  +   KT  L+  +   GAI+  AS++E  R
Sbjct: 139 AVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLESSVVCGAILGGASEDEISR 198

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +  N+G++FQ+ DD+LD
Sbjct: 199 LSKYARNVGLLFQVVDDILD 218


>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
 gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
          Length = 309

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 131/233 (56%), Gaps = 17/233 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L+E  + ++  LD  L  T         +++  A+RY+LL GGK++R  L      
Sbjct: 19  LASYLKEKKQLVEAALDQSLPIT-------RPEKIYEAMRYSLLAGGKRLRPILCLTTCE 71

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       +L    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+ L
Sbjct: 72  LMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDAL 131

Query: 124 LTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           L+YAFE ++   TQ ++   + LM     L   +G  G++GGQ+LD++ E   +  V  +
Sbjct: 132 LSYAFEYVA---TQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTL 188

Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           + +   KTGAL+  +  SGAI+A A   + ERL  + +N+G+ FQ+ DD+LD 
Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDV 241


>gi|254285563|ref|ZP_04960527.1| geranyltranstransferase [Vibrio cholerae AM-19226]
 gi|150424425|gb|EDN16362.1| geranyltranstransferase [Vibrio cholerae AM-19226]
          Length = 294

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|149195157|ref|ZP_01872248.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134709|gb|EDM23194.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
          Length = 278

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 118/192 (61%), Gaps = 10/192 (5%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           L GGK+ R  L+      +N   +   +  A AIE IH YSLIHDDLP+MD+  +RRG P
Sbjct: 28  LAGGKRFRPKLLISVVKAYNPLLIDNAKYAAFAIELIHTYSLIHDDLPAMDDATLRRGHP 87

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+H  YDE TAI+ G+GL TYAFE++S  K  + ++I+ +L+  L+ N G+ GM+ GQ +
Sbjct: 88  TLHTTYDEATAILVGDGLNTYAFEVLS--KAPIHNDIKIELIKILSENAGVSGMVLGQAI 145

Query: 166 DIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D+  E     +DE +   I   KT  L+  + + GAI+ +   +  E+L  FG  LG++F
Sbjct: 146 DLYFENKKLNLDELKELHIN--KTAKLIAASLKMGAIIVN-KIDLAEKLYDFGIKLGLLF 202

Query: 222 QLADDLLDCEED 233
           Q+ DDLLD E++
Sbjct: 203 QIQDDLLDLEDE 214


>gi|56964228|ref|YP_175959.1| geranyltranstransferase [Bacillus clausii KSM-K16]
 gi|56910471|dbj|BAD64998.1| geranyltranstransferase [Bacillus clausii KSM-K16]
          Length = 295

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 131/218 (60%), Gaps = 5/218 (2%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           ++D  L +    ++ +H  RL  A+ Y+L  GGK++R  L+      +N   L  L    
Sbjct: 15  LVDKKLPEYVRELEAEH--RLKEAMLYSLEAGGKRVRPVLLLAVLEAYNQPILHGLDTAC 72

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +H YSL+HDDLP+MD+  +RRG+PT H  + E TAI+AG+ LLT +F +I++    
Sbjct: 73  AIEMVHTYSLVHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTQSFALIANADAP 132

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195
           L    +  ++ +L+   G  GM+GGQ+ D+  E    T  Q+  + K KTG L+ F+ E+
Sbjct: 133 LSAKTKVSIIAALSKAAGASGMVGGQLADMFAEGKQLTVEQLANVHKRKTGELLAFSIEA 192

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GA++A  S  E+ +L  FG+ +G++FQ+ DD+LD E D
Sbjct: 193 GALIAGVSNEERSKLNEFGQEIGLLFQIKDDILDVEGD 230


>gi|15640906|ref|NP_230537.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|153823688|ref|ZP_01976355.1| geranyltranstransferase [Vibrio cholerae B33]
 gi|229510825|ref|ZP_04400304.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae B33]
 gi|229517946|ref|ZP_04407390.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC9]
 gi|229608524|ref|YP_002879172.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae MJ-1236]
 gi|254848025|ref|ZP_05237375.1| geranyltranstransferase [Vibrio cholerae MO10]
 gi|255744681|ref|ZP_05418632.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholera CIRS 101]
 gi|262161186|ref|ZP_06030297.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae INDRE 91/1]
 gi|9655345|gb|AAF94052.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126518791|gb|EAZ76014.1| geranyltranstransferase [Vibrio cholerae B33]
 gi|229344661|gb|EEO09635.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC9]
 gi|229350790|gb|EEO15731.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae B33]
 gi|229371179|gb|ACQ61602.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae MJ-1236]
 gi|254843730|gb|EET22144.1| geranyltranstransferase [Vibrio cholerae MO10]
 gi|255737712|gb|EET93106.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholera CIRS 101]
 gi|262028936|gb|EEY47589.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae INDRE 91/1]
          Length = 294

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
           NIES-39]
          Length = 316

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L +  + ++  LD       + +   + +++  ++RY+L+ GGK++R  L      
Sbjct: 26  LSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCE 78

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y +  AI+AG+GL
Sbjct: 79  LLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGL 138

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           L+YAFE +++    +      Q++  L   +G  G++GGQ++DI  E    + E  +  I
Sbjct: 139 LSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLTFI 198

Query: 181 QKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+  C  C  GAI+A A++ + ERL  + +N+G+ FQ+ DD+LD
Sbjct: 199 HTHKTGALLEACVVC--GAILAGANETDLERLSRYAKNIGLAFQIVDDILD 247


>gi|153216011|ref|ZP_01950233.1| geranyltranstransferase [Vibrio cholerae 1587]
 gi|124114524|gb|EAY33344.1| geranyltranstransferase [Vibrio cholerae 1587]
          Length = 294

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|224373694|ref|YP_002608066.1| geranyltranstransferase [Nautilia profundicola AmH]
 gi|223588370|gb|ACM92106.1| geranyltranstransferase [Nautilia profundicola AmH]
          Length = 281

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 117/187 (62%), Gaps = 5/187 (2%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           L GGK+ R  L+      +    +   +  A AIE IH YSLIHDDLP+MDN  +RRG P
Sbjct: 28  LAGGKRFRPKLLLSVVKAYEPLLVENAKYAAYAIELIHTYSLIHDDLPTMDNADLRRGHP 87

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+H+ YDE+TA++AG+ L TYAFE++S  K+    +++ +L+  L+ N G  GM+ GQ +
Sbjct: 88  TLHVTYDEITALLAGDALNTYAFEVLS--KSPFSSDVKIELIKILSENAGAGGMVLGQAI 145

Query: 166 D--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D   +++ ++  ++  +   KT  L+  + + GA++ +  +  +E+L  FG +LGI+FQ+
Sbjct: 146 DCYFENKKLNLDELKFLHLNKTAKLIAASLQMGAVIVNLDKKLQEKLYNFGIDLGILFQV 205

Query: 224 ADDLLDC 230
            DD+LD 
Sbjct: 206 QDDILDV 212


>gi|121588137|ref|ZP_01677884.1| geranyltranstransferase [Vibrio cholerae 2740-80]
 gi|121728346|ref|ZP_01681376.1| geranyltranstransferase [Vibrio cholerae V52]
 gi|147674651|ref|YP_001216368.1| geranyltranstransferase [Vibrio cholerae O395]
 gi|153817233|ref|ZP_01969900.1| geranyltranstransferase [Vibrio cholerae NCTC 8457]
 gi|227081066|ref|YP_002809617.1| geranyltranstransferase [Vibrio cholerae M66-2]
 gi|229505505|ref|ZP_04395015.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae BX 330286]
 gi|262168689|ref|ZP_06036384.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC27]
 gi|298498988|ref|ZP_07008795.1| geranyltranstransferase [Vibrio cholerae MAK 757]
 gi|121547628|gb|EAX57727.1| geranyltranstransferase [Vibrio cholerae 2740-80]
 gi|121629401|gb|EAX61831.1| geranyltranstransferase [Vibrio cholerae V52]
 gi|126512267|gb|EAZ74861.1| geranyltranstransferase [Vibrio cholerae NCTC 8457]
 gi|146316534|gb|ABQ21073.1| geranyltranstransferase [Vibrio cholerae O395]
 gi|227008954|gb|ACP05166.1| geranyltranstransferase [Vibrio cholerae M66-2]
 gi|227012710|gb|ACP08920.1| geranyltranstransferase [Vibrio cholerae O395]
 gi|229357728|gb|EEO22645.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae BX 330286]
 gi|262022807|gb|EEY41513.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC27]
 gi|297543321|gb|EFH79371.1| geranyltranstransferase [Vibrio cholerae MAK 757]
          Length = 294

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 22/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ 
Sbjct: 55  QMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  I   ++  
Sbjct: 115 LQTLAFTILAEGDLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEELET 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISD 229


>gi|326803324|ref|YP_004321142.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650194|gb|AEA00377.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 299

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 124/213 (58%), Gaps = 3/213 (1%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
           +I  DL     +H+     D LL+++RY+L  GGK++R  L+    + FN ++   L   
Sbjct: 9   SIDKDLEAALIAHLGQDSQDSLLASMRYSLENGGKRLRPSLLLATLASFNYDYHLGLAPA 68

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E IH YSLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ LLT AFE++S  + 
Sbjct: 69  CAVEYIHTYSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDALLTLAFEVLSQSQE 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACE 194
           +    ++ +L+  L    G  GM+ GQ+LD+  E    T  ++  +   KTGAL+ FA  
Sbjct: 129 ETDPQLKLELVQLLAQAAGKSGMVDGQVLDMSSEEKHLTIEELKNLHGKKTGALIHFAIM 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           + A++    Q  ++ L  +  + GI +Q+ +DL
Sbjct: 189 AAALIMDLDQAAQDSLASYAHHFGIAYQIQNDL 221


>gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 295

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 123/199 (61%), Gaps = 8/199 (4%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RY  LLGGK+IR FLV     +   +        A++E +H YSLIHDDLP+MD+
Sbjct: 32  LAEAMRYGVLLGGKRIRPFLVYATGRMLGADLNQLDYAAASVEAVHAYSLIHDDLPAMDD 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
            ++RRG+PT HI +D  TAI+AG+ L  +AFEI++ +P  Q +  +   L+ +L+   G+
Sbjct: 92  DHLRRGQPTCHIAFDHATAILAGDALQAFAFEILTQAPALQAEQKLA--LVQTLSQAAGV 149

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRC 212
           +GM  GQ LD+  + + I   ++  I + KTGA++  A + G I +   +N+   ++L+ 
Sbjct: 150 KGMCLGQSLDLISEQKHISLIELEQIHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQLQR 209

Query: 213 FGENLGIIFQLADDLLDCE 231
           + E +G+ FQ+ DD+LD E
Sbjct: 210 YSEAIGLAFQVQDDILDIE 228


>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 293

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 19/234 (8%)

Query: 19  ILDDLLLQTASHMQTQHN---------DRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           + DD+L++   ++    N         + L  A+RY++  GGK++R  L      L   +
Sbjct: 1   MFDDILMEKIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGD 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+ LL Y F
Sbjct: 61  RDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLT----HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK 182
           E++        D+   Q +L  T    H  G  GM+GGQ++D+  +++ I E ++  +  
Sbjct: 121 EVLIH---HALDSANCQNILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHD 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KTGAL+  +  +GAIM  A     ++L  + E +G+ FQ+ DD+LD   D  K
Sbjct: 178 HKTGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESK 231


>gi|209694502|ref|YP_002262430.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238]
 gi|208008453|emb|CAQ78619.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238]
          Length = 298

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 5/200 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++YALL GGK+ R +LV   A++  ++   A    AA+ECIH YSLIHDDLP+MDN
Sbjct: 34  LTDAMKYALLLGGKRARPYLVYITANMLGIDSEHADAPAAAVECIHSYSLIHDDLPAMDN 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156
             +RRG  T HI++DE TAI+AG+ L T AFEI+++    +  ++ R  ++  L+   G 
Sbjct: 94  DDLRRGHATCHIKFDEATAILAGDALQTLAFEILANGTLAEEAESSRIDMIRVLSKASGA 153

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCF 213
            GM  GQ LD+Q E   +D   +  I   KTGALM  A + GA+ A     +   +L  +
Sbjct: 154 SGMCMGQSLDLQAEGKQVDLLSLEQIHANKTGALMKSAIQLGALCAGEKGKQILPQLEKY 213

Query: 214 GENLGIIFQLADDLLDCEED 233
            + +G+ FQ+ DD+LD   D
Sbjct: 214 ADAIGLAFQVQDDILDITSD 233


>gi|167645671|ref|YP_001683334.1| polyprenyl synthetase [Caulobacter sp. K31]
 gi|167348101|gb|ABZ70836.1| Polyprenyl synthetase [Caulobacter sp. K31]
          Length = 303

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 114/198 (57%), Gaps = 4/198 (2%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           DRL+ A+RY LL  GK+ R  +    A+       +AL    A E IH  SLI DDLP+M
Sbjct: 40  DRLVEAVRYCLLAPGKRFRPMVTLLAAAECGAPEGSALDAACAFEMIHAASLILDDLPAM 99

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG PT+H  +DE TAI+AG GLL  A+ +I++ +  L  ++R++L     H +G
Sbjct: 100 DDAGLRRGLPTIHRAFDEATAILAGVGLLNQAYAVIAADQG-LPGSLRAELTARAAHAVG 158

Query: 156 LQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             G++ GQ  D+  +D+  D   +  +   KTG L+  A + GA++A A +   E    F
Sbjct: 159 FSGLIAGQARDLFDRDQIRDPAALERLNHEKTGVLIIAAAQGGALVAGAPEATVEAFGTF 218

Query: 214 GENLGIIFQLADDLLDCE 231
             ++G+ FQ+ DDL+D +
Sbjct: 219 ARHIGLAFQIRDDLIDAQ 236


>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
 gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
          Length = 322

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 112/205 (54%), Gaps = 8/205 (3%)

Query: 37  DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           DRL  A+RYA+LGG K++R  LV     L   +         A+E IH YSL+HDD+P+M
Sbjct: 53  DRLHEAMRYAVLGGGKRVRPLLVYAAGELVGADARVLDGAACAVELIHVYSLVHDDMPAM 112

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP----KTQLKDNIRSQLMLSLT 151
           DN  +RRGKPTVH QY E  A++ G+ L   AFE++ +P      Q      + ++  L 
Sbjct: 113 DNDDMRRGKPTVHRQYGEAMAMLVGDALQALAFEVLVAPLVEADPQAARVPAATMVAVLA 172

Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKE 208
              G  GM GGQ LDI+     +   Q+  + + KTGA++  + E G +     S +  E
Sbjct: 173 RAAGSWGMAGGQALDIEGVGLRLSRPQLEAMHRAKTGAMLSVSVELGLLAGGQPSADLAE 232

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            ++ +G  +G+ FQ+ DD+LD   D
Sbjct: 233 AMQRYGRAIGLAFQVVDDILDVTAD 257


>gi|310814826|ref|YP_003962790.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare
           Y25]
 gi|308753561|gb|ADO41490.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare
           Y25]
          Length = 290

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 135/228 (59%), Gaps = 10/228 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +Q  S R+     D+    A+H+        + SA+ YA  GGK +R FLV E A L  +
Sbjct: 1   MQSLSTRMAAAAADVQALIAAHLSPLAAASPVASAMIYACTGGKGLRGFLVLESARLHGI 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +  AL V AA+E +H YSL+HDD+P+MD+  +RRG+PTVH Q+DE TA++AG+ L +  
Sbjct: 61  AYADALPVAAAVEAVHAYSLVHDDMPAMDDDDLRRGRPTVHRQWDEATALLAGDALQSLG 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKM 183
           FE+I++    L D+ R  L+       G+ GM+GGQ  DI  E         Q+  +Q+ 
Sbjct: 121 FELIAT--AALPDSARVTLLAGFARAAGIHGMVGGQEADIAAETAARPLSLDQIIALQRG 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           KTGAL+ ++  +GA+MA A   +   LR FG+ +G+ FQ+ DD+LD E
Sbjct: 179 KTGALITWSASAGAVMAGA---DAAPLRAFGDAIGLAFQITDDILDVE 223


>gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
 gi|6225572|sp|O66952|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
          Length = 262

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 12/221 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72
           +RI+T  + +  +    ++ +  + L+ A++Y  L  GK+IR       AS    N   A
Sbjct: 2   ERIETWKEKIEKRLNEILKPEGPEELIEAMKYYPLQKGKRIRPLFTVAVASALGGNEDDA 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + VG+ IE IH YSLIHDDLP MDN   RRG PT HI++ E  A++AG+ LLTY FE++S
Sbjct: 62  ITVGSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLS 121

Query: 133 SPKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM- 189
             +     +    L ++  +    G  GM+GGQ+LDI+        ++ +   KTGAL  
Sbjct: 122 QRENYKTLSCEEILEINKIIAQKAGSNGMVGGQVLDIK----GYEDLYEVSVKKTGALFE 177

Query: 190 -CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            CF C  GA++A   +  KE +   G  +G++FQ+ DD LD
Sbjct: 178 ACFMC--GAVVAKRREKLKE-MESIGRKVGLLFQMVDDYLD 215


>gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
          Length = 297

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 129/232 (55%), Gaps = 9/232 (3%)

Query: 6   PSK-LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           PS+ L+   +RI+T+LD  L        +  + RL+ A+RYA L GGK++R  LV    +
Sbjct: 6   PSEALKAYQRRIETVLDQRLAA-----DSAPDPRLIEAMRYATLSGGKRLRPVLVYAAGA 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                      + AA+E +H YSLIHDDLP+MDN  +RRG+PT H  +DE TAI+AG+ L
Sbjct: 61  TCGAPDDVLDAMAAAVEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAGDAL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
              AFEI+++    L        +  L H  GL GM GGQ +D+    + ID  ++  + 
Sbjct: 121 QACAFEIMTAGVRALPGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELERMH 180

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++KTGAL+  +   GAI      +    L  + E +G+ FQ+ DD+LD E D
Sbjct: 181 RLKTGALIRVSVRLGAIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGD 232


>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
 gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
 gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
 gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
 gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
 gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
          Length = 297

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y+L  GGK+IR  L+         +    L V  AIE IH YSLIHDDLPSMDN
Sbjct: 34  LKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDN 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPT H  + E  AI+AG+ LLTYAF++++     ++   +R QL+  L    G 
Sbjct: 94  DDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLMAEIDDDRVPPPVRLQLIEQLAKAAGP 153

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+ GQ  D++ E   +   ++  I + KTG ++ ++  +GA++  A   +   L  F 
Sbjct: 154 EGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFA 213

Query: 215 ENLGIIFQLADDLLDCE 231
            +LG+ FQ+ DD+LD E
Sbjct: 214 AHLGLAFQIRDDILDIE 230


>gi|188996777|ref|YP_001931028.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931844|gb|ACD66474.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 287

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 7/196 (3%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + L +A+RY+L  GGK+IR  LV ECA     +VN    + +  + E IH YSLIHDDLP
Sbjct: 28  EELSNAMRYSLEAGGKRIRPILVIECAKAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E  AI+AG+GLLT+AFE+IS+ K    + I   + + L+HN
Sbjct: 88  AMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTFAFELISNNKKLSAEKIVKVINI-LSHN 146

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G+ GM+GGQ  DI   F D   V  I   KT   +   C+ G ++A A++ E  +L+ +
Sbjct: 147 VGIYGMVGGQAADILPNFKD---VEFIHLNKTAKFLSACCQIGCVLADATEEEILKLKNY 203

Query: 214 GENLGIIFQLADDLLD 229
           G N+G+ FQ+ DD+LD
Sbjct: 204 GINIGLAFQIWDDILD 219


>gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
          Length = 295

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 5/214 (2%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           +LQT   +       L  A+RY+ L GGK++R  LV   + L N          AA+ECI
Sbjct: 18  ILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAACEAAMAAVECI 77

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H YSL+HDD+P+MDN  +RRGKPT H+Q+ E TA++ G+ L T AF+I+S+ +T+L    
Sbjct: 78  HVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLVGDALQTLAFDILST-ETELSTVR 136

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMA 200
           + +++  L    G  GM GGQ +D+ +   D  +T++  +  +KTGAL+  A   G +  
Sbjct: 137 QLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKTGALIRAAVALGGLSC 196

Query: 201 HASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
               +E+   L  +   LG+ FQ+ DD+LDCE D
Sbjct: 197 PDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEAD 230


>gi|15676185|ref|NP_273317.1| geranyltranstransferase [Neisseria meningitidis MC58]
 gi|7225485|gb|AAF40715.1| geranyltranstransferase [Neisseria meningitidis MC58]
          Length = 259

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 112/195 (57%), Gaps = 5/195 (2%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +R
Sbjct: 1   MRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGKPT HI+Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G +GM G
Sbjct: 61  RGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAG 119

Query: 162 GQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLG 218
           GQ +D+ +      Q  + Q   +KTGAL+  A   GA      S  E   L  +   LG
Sbjct: 120 GQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLG 179

Query: 219 IIFQLADDLLDCEED 233
           + FQ+ DD+LDCE D
Sbjct: 180 LAFQVIDDVLDCEAD 194


>gi|295698395|ref|YP_003603050.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA]
 gi|291157112|gb|ADD79557.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA]
          Length = 302

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 129/231 (55%), Gaps = 7/231 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
             + SK I   ++D+L+Q     Q  H + L++ IRY +  GKKIRS  +    S+  V+
Sbjct: 9   FHQKSKIIKKQVNDILMQKVRSFQKIHRN-LINVIRYIIFEGKKIRSCFIYSVGSMLKVS 67

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                ++ A++EC+H YSLIHDDLPSMDN  IRR K + HI + E  AI+AGN L   AF
Sbjct: 68  CKQISKIAASVECMHAYSLIHDDLPSMDNDDIRRNKKSCHIVFGEANAILAGNALQALAF 127

Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           E ++S  +  L      Q++  LT   G++G+ GGQ LDI  +      + ++  +    
Sbjct: 128 ELLLSLNRKNLDHKSHLQIIRELTIAGGIKGICGGQSLDISKKKRCHMNIELLNIIYFYK 187

Query: 188 LMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEED 233
            +     S  ++ +AS+   E+     L  + EN+G++FQ+ADDL+D ++D
Sbjct: 188 TVSLIRASIRMIFYASRYRYEKKLILILDDYSENIGLLFQIADDLIDFKKD 238


>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 295

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 126/216 (58%), Gaps = 4/216 (1%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+   +M+  +N  L+ +++Y+L  GGK++R  L      +F  +    +     IE IH
Sbjct: 18  LKDYFNMKEGYNQTLIESMKYSLFAGGKRLRPILSLASYQMFRDDIEEVMPYACGIEMIH 77

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP+MDN   RRGK T H  Y+E  AI+AG+GLL Y+FE++     +  D  +
Sbjct: 78  TYSLIHDDLPAMDNDDYRRGKLTNHKVYNEGVAILAGDGLLNYSFELMLENAIKQNDIYK 137

Query: 144 SQLML-SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA 200
             + +  ++++ G+ GM+GGQ++D++ E   ID+  +  I   KT AL+  + + GAI+A
Sbjct: 138 HIVAIKEISNSAGVHGMIGGQVVDLESENKIIDKEMLDYIHINKTAALITTSLKVGAIIA 197

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A + +   +   G NLG+ FQ+ DD+LD   D  K
Sbjct: 198 GAQEEDIRNMEKVGLNLGLAFQIKDDILDVVGDEAK 233


>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
 gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
          Length = 295

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 115/197 (58%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RY++  GGK++R  L+         +    +    A+E IH YSLIHDDLP+MDN
Sbjct: 32  LHGAMRYSVFAGGKRVRPVLMLAACEAVGGSPQAVMPAACAMEMIHTYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG PT H  Y E TAI+AG+ LLT AF ++S+         R +++  +    G +
Sbjct: 92  DDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSANGEGGDPAARLRVIQEIAVASGSR 151

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           GM+GGQ++D++ E    +D   +  I   KTGAL+  +  SGAIM  AS+ + + L  + 
Sbjct: 152 GMVGGQVVDMESEGRHDVDLATLSYIHTHKTGALIRASVRSGAIMGGASEEQFKALTRYA 211

Query: 215 ENLGIIFQLADDLLDCE 231
           + +G+ FQ+ADD+LD E
Sbjct: 212 DAIGLAFQIADDILDVE 228


>gi|220929321|ref|YP_002506230.1| polyprenyl synthetase [Clostridium cellulolyticum H10]
 gi|219999649|gb|ACL76250.1| Polyprenyl synthetase [Clostridium cellulolyticum H10]
          Length = 294

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 116/193 (60%), Gaps = 3/193 (1%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+LL GGK++R  L    A +F+      +  G AIE IH YSLIHDDLP+MDN   
Sbjct: 35  AMSYSLLAGGKRLRPVLALAVAEMFDKPFDEVINFGCAIEMIHTYSLIHDDLPAMDNDDY 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGK T H  + E  AI+AG+GLL  A+EI+ +   + ++  + +    +    G  GM+
Sbjct: 95  RRGKLTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESRNIEKMRAAGIVAKYAGALGMV 154

Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ++D+Q E   I+  ++  + ++KTGAL+    E+ A++  A + E E L  +  NLG
Sbjct: 155 GGQVIDLQSEEKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGYAANLG 214

Query: 219 IIFQLADDLLDCE 231
           + FQ+ DD+LD E
Sbjct: 215 LAFQIKDDILDIE 227


>gi|323144187|ref|ZP_08078822.1| geranyltranstransferase [Succinatimonas hippei YIT 12066]
 gi|322416028|gb|EFY06727.1| geranyltranstransferase [Succinatimonas hippei YIT 12066]
          Length = 294

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 3/194 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y L LGGK+ R  LV         +  +     AA+ECIH YSLIHDD+P MDN
Sbjct: 32  LKEAMSYGLILGGKRSRPLLVYATGKALGASDASLDYAAAAVECIHAYSLIHDDMPEMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG PTVH ++ + TA++AG+ L T  FE  S   + L   +R +L   L    G  
Sbjct: 92  DELRRGHPTVHKKFGQATALLAGDALQTLGFEFASDKNSGLSGELRGELCAVLAKGAGFS 151

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM GGQ +D+  E   I   ++ ++   KTGAL+  A   GA+ A A +  K  L  +  
Sbjct: 152 GMCGGQAMDLDAEGKHIPLERLRVLHSKKTGALIRVAVAMGAVCADADEKTKAVLDEYAA 211

Query: 216 NLGIIFQLADDLLD 229
             G+ FQ+ DD+LD
Sbjct: 212 LTGLAFQVWDDVLD 225


>gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
 gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
          Length = 313

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 10/221 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R+D  L + +    SH +     +L+ AIRY +L GGK+IR +LV     +F ++  + 
Sbjct: 19  RRVDEKLKNFIQPLPSHSR-----QLIEAIRYTVLCGGKRIRPYLVYATGKMFGLSPGSL 73

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+ECIH YSL+HDDLP+MD+  +RRG+P+ HI++ E  AI+AG+ L T AF +++
Sbjct: 74  DVAAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDALQTLAFSLLA 133

Query: 133 -SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
             P   +    R +++  L   IG  GM  GQ LD+  E   I    +  I + KTGAL+
Sbjct: 134 DQPMPNVTLENRLKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEKIHRHKTGALI 193

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229
             A   GA+ A   S+     L  + + +G+ FQ+ DD+LD
Sbjct: 194 RAAVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILD 234


>gi|88607980|ref|YP_506571.1| putative geranyltranstransferase [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600149|gb|ABD45617.1| putative geranyltranstransferase [Neorickettsia sennetsu str.
           Miyayama]
          Length = 256

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 25/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           KLQ+ S+ I   L + L    S       D+L  AIRY+LL     IR FLV E  +LFN
Sbjct: 6   KLQKASRLIRETLKENLSLFPSE------DKLFQAIRYSLLAESSHIRGFLVLELGTLFN 59

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           + ++  + V AAIE IH +SLIHDDLP++DN   RR +P  HI + E TAI+AG+ LL  
Sbjct: 60  IPYVDTIEVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVL 119

Query: 127 AFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           A++++S   +P  Q       +++    H++     +G   L   DE         I KM
Sbjct: 120 AYQMLSRYGTPLVQCTSKYVLEMITGQVHDV-----IGSSTL-TADE---------INKM 164

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K+G+L   +C S   +A++ Q+E   L  FG  +GIIFQ  DD+ D
Sbjct: 165 KSGSLFALSCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210


>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
           51196]
 gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
           51196]
          Length = 300

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 13/201 (6%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDN 97
           AIR++   GGK++R  L  E A     +      V   GAAIE +H YSLIHDDLP++DN
Sbjct: 39  AIRHSTFAGGKRLRPVLAMEAARTLRRDRALPAGVEDLGAAIEMLHTYSLIHDDLPALDN 98

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154
             +RRGKPT H+ + E  AI+AG+ L T A++ ++    P     + IR  L+   T  +
Sbjct: 99  DDLRRGKPTCHVVFGEAIAILAGDALQTLAYQTLAQLRCPAPATVEIIR--LIAEATGTV 156

Query: 155 GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             +GM+GGQ+LD++ E    T   V  I + KTGAL+  +  +G + A A+  + ERL  
Sbjct: 157 --EGMIGGQVLDLEGEGTRPTAESVDAIHRAKTGALIRVSIVTGGVYAGATPEDVERLTI 214

Query: 213 FGENLGIIFQLADDLLDCEED 233
           FG   G+ FQ+ DD+LD  +D
Sbjct: 215 FGRKAGLAFQIVDDVLDMTQD 235


>gi|221640630|ref|YP_002526892.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131]
 gi|221161411|gb|ACM02391.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131]
          Length = 289

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 127/202 (62%), Gaps = 8/202 (3%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           ++ A+RYA+ GGK++R FLV E A L  +    A+   A+IE +H YSL+HDD+P MD+ 
Sbjct: 30  VVHAMRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDD 89

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG PTVH ++DE TA++AG+ L T AFE+++ P       +R +L+ SL    G +G
Sbjct: 90  DLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-SAEVRIELVASLAKASGAEG 148

Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LDI  E     +   Q+  +Q  KTGAL+ ++ E+GAI+    Q ++  LR + 
Sbjct: 149 MVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAIL---GQADRVPLRRYA 205

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
             LG+ FQ+ADD+LD E D  K
Sbjct: 206 TALGLAFQIADDILDVEGDAEK 227


>gi|126463556|ref|YP_001044670.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|332559609|ref|ZP_08413931.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N]
 gi|126105220|gb|ABN77898.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029]
 gi|332277321|gb|EGJ22636.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N]
          Length = 289

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 127/202 (62%), Gaps = 8/202 (3%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           ++ A+RYA+ GGK++R FLV E A L  +    A+   A+IE +H YSL+HDD+P MD+ 
Sbjct: 30  VVHAMRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDD 89

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG PTVH ++DE TA++AG+ L T AFE+++ P       +R +L+ SL    G +G
Sbjct: 90  DLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAEVRIELVASLAKASGAEG 148

Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LDI  E     +   Q+  +Q  KTGAL+ ++ E+GAI+    Q ++  LR + 
Sbjct: 149 MVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAIL---GQADRVPLRRYA 205

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
             LG+ FQ+ADD+LD E D  K
Sbjct: 206 TALGLAFQIADDILDVEGDAEK 227


>gi|291520797|emb|CBK79090.1| Geranylgeranyl pyrophosphate synthase [Coprococcus catus GD/7]
          Length = 303

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 13/234 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L  +L+E +  I+ +L+ +L + A   +T     + SA+RY+L+ GGK+IR  L+ E   
Sbjct: 3   LEQELKEKTADIEKLLERMLPEEAGLQKT-----IFSAMRYSLMAGGKRIRPLLIAETYR 57

Query: 64  LFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F    +  A    AAIE IH YSLIHDDLP++DN   RRG+ T H  Y E  AI+AG+ 
Sbjct: 58  FFGGTDMALAEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRLTSHKVYGEAMAILAGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           LL YAFE  S      +D+     ++     L+   G+ GM+GGQ++D++   + I E  
Sbjct: 118 LLNYAFETASKAMDHARDDEELLRVMKAFRILSSKPGINGMIGGQVVDVELTGKPIPEKT 177

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +  I ++KTGAL+  A   GA +A AS  +   +     ++G+ FQ+ DD+LD 
Sbjct: 178 LRFIFELKTGALIEAAMMIGAQLAGASDEQIAAVEKAAGDIGMAFQIQDDVLDV 231


>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
 gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
          Length = 297

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 3/199 (1%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +R+  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP
Sbjct: 31  YPERIYEAMRYSLLAGGKRLRPILCLAACELAGGSVEQAMPTACALEMIHTMSLIHDDLP 90

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRGKPT H  + E  AI+AG+ LL YAFE I+S    +   +  Q++  + H 
Sbjct: 91  AMDNDDFRRGKPTNHKVFGEDIAILAGDALLAYAFEHIASQTRGVPPQLVLQVIARIGHA 150

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +   G++GGQ++D++ E   I    +  I   KTGAL+  +  SG I+A A +    RL 
Sbjct: 151 VAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGALLEASVVSGGILAGADEELLARLS 210

Query: 212 CFGENLGIIFQLADDLLDC 230
            +  ++G+ FQ+ DD+LD 
Sbjct: 211 HYARDIGLAFQIVDDILDV 229


>gi|121634131|ref|YP_974376.1| geranyltranstransferase [Neisseria meningitidis FAM18]
 gi|120865837|emb|CAM09569.1| geranyltranstransferase [Neisseria meningitidis FAM18]
 gi|325143100|gb|EGC65447.1| geranyltranstransferase [Neisseria meningitidis 961-5945]
 gi|325143170|gb|EGC65516.1| geranyltranstransferase [Neisseria meningitidis 961-5945]
 gi|325197545|gb|ADY93001.1| geranyltranstransferase [Neisseria meningitidis G2136]
          Length = 298

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 113/199 (56%), Gaps = 5/199 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN
Sbjct: 36  LHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDN 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT HI+Y E  A++ G+ L T AF+++S P T+L    +  ++  L    G +
Sbjct: 96  DSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSR 154

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFG 214
           GM GGQ +D+ +      Q  + Q   +KTGAL+  A   GA      S  E   L  + 
Sbjct: 155 GMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYA 214

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG+ FQ+ DD+LDCE D
Sbjct: 215 AKLGLAFQVIDDVLDCEAD 233


>gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
           16/4]
          Length = 305

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 6/198 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A++Y++  GGK++R  L+ E  +LF           AAIE IH YSL+HDDLP+MDN
Sbjct: 40  IFDAMQYSVTAGGKRLRPILMNETFTLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMDN 99

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156
             +RRGKPT H  Y E   ++AG+ LL YAFE   +      D +R ++ M  L    G+
Sbjct: 100 DSLRRGKPTTHAVYGEAMGVLAGDALLNYAFETALNAYDADIDTVRVTEAMRILARKAGV 159

Query: 157 QGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQ++D++ E     + + ++  I ++KTGAL+  A   GA++A A++ +   +  
Sbjct: 160 FGMIGGQVVDVESEKKQLEMTKEKIDFIYELKTGALIEAAMMIGAVLAGATEQQVTTVEN 219

Query: 213 FGENLGIIFQLADDLLDC 230
             + +G+ FQ+ DD+LD 
Sbjct: 220 VAKKIGLAFQIQDDILDV 237


>gi|188534651|ref|YP_001908448.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99]
 gi|188029693|emb|CAO97572.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99]
          Length = 299

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 118/202 (58%), Gaps = 9/202 (4%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++AI Y ALLGGK++R FLV    ++ + +        AA+ECIH YSLIHDDLP+MDN
Sbjct: 32  LVNAIEYGALLGGKRLRPFLVYATGNMLHADDAALDAPAAAVECIHAYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  AI+AG+ L T AF I++ +P   +    R  ++  L    G+
Sbjct: 92  DSLRRGQPTCHIKFGEDAAILAGDALQTLAFSILADAPMPGVTAESRVAMLSELAQASGV 151

Query: 157 QGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211
            GM GGQ LD+  E     +DE +   I + KTGAL+  A   GA+ A A        L 
Sbjct: 152 AGMCGGQALDLAAEGKRVTLDELE--QIHRHKTGALIRSAVRLGALSAGAPGRAALPALD 209

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            F + +G+ FQ+ DD+LD   D
Sbjct: 210 RFADAIGLAFQVQDDILDVIGD 231


>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
 gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
 gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
 gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
          Length = 309

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 132/242 (54%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L S L++  + ++  LD  L  T         + +  A+RY+LL GGK++R  L   
Sbjct: 16  NFDLASYLKDKQQLVEAALDRSLAIT-------RPETIYEAMRYSLLAGGKRLRPILCLT 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       AL    A+E IH  SLIHDDLP+MDN   RRGK T H +Y E  AI+AG
Sbjct: 69  TCELLGGTLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
           +GLL YAFE  ++    +  +    ++  L   +G  G++GGQ+LD++ E   +  V   
Sbjct: 129 DGLLAYAFEYAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDL 234
             I   KTGAL+  +  SGAI+A  S  + +RL  + +N+G+ FQ+ DD+LD    +E+L
Sbjct: 189 KFIHTHKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEEL 248

Query: 235 PK 236
            K
Sbjct: 249 GK 250


>gi|323705302|ref|ZP_08116877.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535204|gb|EGB24980.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 293

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 10/211 (4%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T   + L  A++Y++  GGK++R  L      L   N   AL V  AIE IH YSLIHDD
Sbjct: 24  TDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGGNKEDALPVACAIEFIHTYSLIHDD 83

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MDN  +RRGKPT H  Y E  AI+AG+ LL Y FE++     Q  ++ +SQ +L   
Sbjct: 84  LPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQ---QALNSNKSQNILKAA 140

Query: 152 HNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             I    G +GM+ GQ++D+  +++ I E  +  +   KTGAL+  +  +GAI+  A   
Sbjct: 141 DEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHKTGALIKASILAGAIIGGADAA 200

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             ++L  + E LG  FQ+ DD+LD + D  K
Sbjct: 201 TLKKLSSYAEYLGFAFQVKDDILDVQGDEAK 231


>gi|239637669|ref|ZP_04678641.1| geranyltranstransferase [Staphylococcus warneri L37603]
 gi|239596887|gb|EEQ79412.1| geranyltranstransferase [Staphylococcus warneri L37603]
          Length = 292

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/208 (41%), Positives = 124/208 (59%), Gaps = 7/208 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L  ++ Y+L  GGK+IR  L+     + N ++   ++   A+E IH YSLIHDDLP+
Sbjct: 26  NTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQGMQSALALEMIHTYSLIHDDLPA 85

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  Y E  AI+AG+ LLT AFE++S   + L D  + +++  L +  
Sbjct: 86  MDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSYD-SALCDAKKVKVLQRLAYAS 144

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ LD+Q  D+ ID + +  I + KTGAL+ FA  S   +A   ++    L  
Sbjct: 145 GHLGMVGGQTLDMQSEDKKIDISTLESIHRTKTGALLTFAIMSAVDIADTDEHTSAMLNE 204

Query: 213 FGENLGIIFQLADDLLDC---EEDLPKK 237
           F ++LG++FQ+ DDLLD    E+ L KK
Sbjct: 205 FSDHLGLMFQIKDDLLDIYGDEQKLGKK 232


>gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 289

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 12/192 (6%)

Query: 45  YAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           Y+L +GGK+IR  L++    ++  ++   + + AA+E IH YSLIHDDLP MDN  +RRG
Sbjct: 34  YSLNIGGKRIRPILLSLTYYIYKEDYRKVIPMAAAMEMIHTYSLIHDDLPCMDNDDLRRG 93

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGM 159
           KPT HI++ E  A++AG+ LL  A  I+     + ++N      L   H I    G +GM
Sbjct: 94  KPTNHIKFQENIAVLAGDALLNEAMIIMMDYALKSENN-----ALRAAHEIAVAAGAEGM 148

Query: 160 LGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ++DI  E   I + ++  +   KTGAL+  A  SGAI+A A +++   LR +GE L
Sbjct: 149 IGGQVVDIISEGKKISQDELEYMHAKKTGALIRAAIVSGAILAEAPEDDLRLLREYGEKL 208

Query: 218 GIIFQLADDLLD 229
           G++FQ+ DD+LD
Sbjct: 209 GLVFQIKDDILD 220


>gi|262165140|ref|ZP_06032877.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus VM223]
 gi|262024856|gb|EEY43524.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus VM223]
          Length = 294

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 28/242 (11%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ G+ 
Sbjct: 55  QMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDA 114

Query: 123 LLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           L T AF I++    SP  + +   R  ++ +L    G QGM  GQ LD+  ++  +   +
Sbjct: 115 LQTLAFTILAEGTLSPAGETQ---RVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCE 231
           +  I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAA----GEKGRAILPHLDRYAEAVGLAFQVQDDILDII 227

Query: 232 ED 233
            D
Sbjct: 228 SD 229


>gi|258624384|ref|ZP_05719332.1| geranyltranstransferase [Vibrio mimicus VM603]
 gi|258583346|gb|EEW08147.1| geranyltranstransferase [Vibrio mimicus VM603]
          Length = 294

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 28/242 (11%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ G+ 
Sbjct: 55  QMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDA 114

Query: 123 LLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           L T AF I++    SP  + +   R  ++ +L    G QGM  GQ LD+  ++  +   +
Sbjct: 115 LQTLAFTILAEGSLSPAGETQ---RVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCE 231
           +  I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAA----GEKGRTILPHLDRYAEAVGLAFQVQDDILDII 227

Query: 232 ED 233
            D
Sbjct: 228 SD 229


>gi|300071276|gb|ADJ60676.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 285

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 14/195 (7%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +Y+L+ GGK+IR  L       F++   TA  +V AA+E IH  SLIHDDLP+MDN   R
Sbjct: 30  KYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMDNDDYR 89

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQ 157
           RGK T H ++DE TAI+AG+ L    F ++SS       ++ +Q ++SLT  +    G  
Sbjct: 90  RGKLTNHKKFDEATAILAGDTLFFDPFYVLSS------SDLSAQTIVSLTRELAYASGSY 143

Query: 158 GMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+ GQ+LD+  E  D   TQ+  I ++KTG L+ F   +  I+A  +  E E+LR  G+
Sbjct: 144 GMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLRVVGQ 203

Query: 216 NLGIIFQLADDLLDC 230
            LG+ FQ+ DD+LD 
Sbjct: 204 ILGLAFQIRDDILDV 218


>gi|258621633|ref|ZP_05716665.1| geranyltranstransferase [Vibrio mimicus VM573]
 gi|258586105|gb|EEW10822.1| geranyltranstransferase [Vibrio mimicus VM573]
          Length = 294

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 28/242 (11%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ G+ 
Sbjct: 55  QMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDA 114

Query: 123 LLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           L T AF I++    SP  + +   R  ++ +L    G QGM  GQ LD+  ++  +   +
Sbjct: 115 LQTLAFTILAEGTLSPAGETQ---RVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCE 231
           +  I + KTGALM  A   GA+    S  EK R     L  + E +G+ FQ+ DD+LD  
Sbjct: 172 LETIHRNKTGALMRCAIRLGAL----SAGEKGRAILPHLDRYAEAVGLAFQVQDDILDII 227

Query: 232 ED 233
            D
Sbjct: 228 SD 229


>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
           16795]
 gi|164603021|gb|EDQ96486.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
           16795]
          Length = 295

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 129/225 (57%), Gaps = 5/225 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
            +E+ K     ++DLL Q     +  +   +  A+ Y+L  GGK++R  L  E A +   
Sbjct: 3   FKEDLKTKSAYIEDLLKQYMPK-EEGYQKTIFEAMNYSLSSGGKRLRPILTLESAKIIGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    +    AIE IH YSLIHDDLP+MDN   RRGKPT H  + +  A +AG+ LL YA
Sbjct: 62  DVKEVIPFCVAIEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGDGMATLAGDALLNYA 121

Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMK 184
           FEI+       ++ +IR + +  +    G+ GM+GGQ++DI+ E   I++ ++  I   K
Sbjct: 122 FEIMLKESLGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEKEKLDFIHMNK 181

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T A++     +GAIM +A +++ + +  + +N+G+ FQ+ DD+LD
Sbjct: 182 TAAMIIGCMRAGAIMGNACEDDLQNITKYAKNIGLAFQIVDDILD 226


>gi|118595179|ref|ZP_01552526.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Methylophilales bacterium HTCC2181]
 gi|118440957|gb|EAV47584.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Methylophilales bacterium HTCC2181]
          Length = 296

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 131/212 (61%), Gaps = 9/212 (4%)

Query: 29  SHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHC 84
           SH   + +  LL  +  YA+L GGK++RS L+   ++  +    H   L +  A+E IH 
Sbjct: 22  SHFFKEIDQSLLKNVCEYAVLNGGKRLRSLLIYAISNYSDGYDTHFNCLAL--AVEMIHA 79

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSL+HDDLPSMD+  +RRGKP+ HI+YDE  AI+ G+ L + AFE++SS K  ++D ++ 
Sbjct: 80  YSLVHDDLPSMDDDELRRGKPSCHIKYDEAQAILGGDALQSLAFELLSSDKFNVQDKVKI 139

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACE-SGAIMAH 201
           +++  L+ +IGL GM  GQ +DI   ++ ++   +  +Q +KTGAL+  +C  S  I   
Sbjct: 140 KVLNMLSQSIGLHGMALGQSIDIDSANKELNLKSLDHLQALKTGALIEASCVMSYVISDK 199

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +Q  ++ +   G+ +G I+Q+ DD+LD E D
Sbjct: 200 YNQKHEKDIASIGKLIGSIYQITDDILDFESD 231


>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
 gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
          Length = 299

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 112/197 (56%), Gaps = 4/197 (2%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL  A+RY+LL GGK++R  L  E ASLF       L   AAIE IH +SLIHDDLP+M
Sbjct: 35  ERLQEAMRYSLLAGGKRVRPLLCMESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPAM 94

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRGKPT H ++ E  AI+AG+     +  +I+  +    + + + ++  L H  G
Sbjct: 95  DNDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDHQEGSAEQVLA-VVRELAHATG 153

Query: 156 LQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           L G+ GGQ LD++         ++ +    KTGAL+  +   GAI+A A +   E +  +
Sbjct: 154 LAGLAGGQALDLEHTGRRAGPKELELTHHHKTGALIRASARIGAILAGAGEEGLEAISRY 213

Query: 214 GENLGIIFQLADDLLDC 230
              LG+ FQ+ DD+LD 
Sbjct: 214 ATELGLCFQIVDDVLDA 230


>gi|332704078|ref|ZP_08424166.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554227|gb|EGJ51271.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
          Length = 298

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 124/198 (62%), Gaps = 4/198 (2%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RLL+++ Y+LL GGK++R  L  + A L  ++   A+   A++E IH YSLIHDDLP+M
Sbjct: 32  ERLLTSMEYSLLAGGKRLRPVLCLKWAKLCGLDMEKAMPFAASLELIHTYSLIHDDLPAM 91

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRGKP+ H Q+DE TAI+AG+GLLT AF +++     L        M ++    G
Sbjct: 92  DNDDLRRGKPSNHKQFDEATAILAGDGLLTEAFSLMAQAAESLPAERVVCAMKAVAAAAG 151

Query: 156 LQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             GM+GGQ LD++      I   Q+  +  MKTGAL+  AC SGA++A +  +  E+   
Sbjct: 152 AGGMVGGQALDMEYTGKAGISLDQLQTMHAMKTGALIRVACLSGAMLAGSKASVLEKAST 211

Query: 213 FGENLGIIFQLADDLLDC 230
           +G  +G+ FQ+ADD+LD 
Sbjct: 212 YGAAIGVAFQIADDILDV 229


>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
 gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
          Length = 296

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 7/231 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   LQ     I+  L++LL  +   + T  ++ +L ++R    GGK++R  L    A  
Sbjct: 4   LEQSLQHAIPLINQRLEELLSPSDEPLLTTIHEAMLYSVRA---GGKRLRPLLCLLTAGA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +    L +  AIE IH YSLIHDDLP++DN  +RRGKPT H  Y E  AI+AG+ LL
Sbjct: 61  LRQDESRVLDIACAIEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILAGDALL 120

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182
             AFE++   +  L  ++  +++  +  + G  GM+GGQ++DIQ E   ID   +  I +
Sbjct: 121 NRAFEVLC--QLPLAPDLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTMRYIHE 178

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KTG ++     S AI   A+  + E    +G N+G+ FQ+ADD+LD E D
Sbjct: 179 NKTGRIIRSCLVSSAIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGD 229


>gi|294827621|ref|NP_710507.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293385465|gb|AAN47525.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 313

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 123/220 (55%), Gaps = 14/220 (6%)

Query: 26  QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           QT S +  Q    L  A++Y+L+ GGK++R  L               L +GA++ECIH 
Sbjct: 24  QTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHT 83

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLPSMDN   RRG PT+H ++ E TAI+AG+ L ++AF  IS  + +  D+   
Sbjct: 84  YSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHFLH 143

Query: 145 QLMLSLTH-NIGLQGMLGGQMLDIQ---------DEFIDETQVFMIQ---KMKTGALMCF 191
           + +L + H   G  GM+ GQ+ D+Q         D      ++ M+Q   ++KTGAL+  
Sbjct: 144 RNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDSTNQSDKIEMLQLTHRLKTGALIKS 203

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   G  +    +  +  L  +GE+LG++FQ+ DD+LD E
Sbjct: 204 ALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDILDVE 243


>gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565]
 gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565]
          Length = 296

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 116/203 (57%), Gaps = 9/203 (4%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+ Y LL GGK++R FLV     +  V         AA+ECIH YSL+HDDLP+MD
Sbjct: 31  RLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHN 153
           N  +RRG+PTVH  +DE TAI+AG+ L T AF I++    P + + + +R  ++ +L   
Sbjct: 91  NDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPMPDSLMANRVR--MLSTLARA 148

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERL 210
            G  GM GGQ LD+Q E   I   ++  + + KTGAL+  A   GA+  A         L
Sbjct: 149 SGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAVALGALCKADVDDATLAAL 208

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           + +   +G+ FQ+ DD+LD   D
Sbjct: 209 QTYAAAIGLAFQVQDDILDITGD 231


>gi|262172097|ref|ZP_06039775.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus MB-451]
 gi|261893173|gb|EEY39159.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus MB-451]
          Length = 294

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 28/242 (11%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ G+ 
Sbjct: 55  QMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTGDA 114

Query: 123 LLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           L T AF I++    SP  + +   R  ++ +L    G QGM  GQ LD+  ++  +   +
Sbjct: 115 LQTLAFTILAEGTLSPAGETQ---RVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCE 231
           +  I + KTGALM  A   GA+ A     EK R     L  + E +G+ FQ+ DD+LD  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAA----GEKGRAILLHLDRYAEAVGLAFQVQDDILDII 227

Query: 232 ED 233
            D
Sbjct: 228 SD 229


>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
 gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
          Length = 295

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 15/211 (7%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +D+L +++ Y+L+ GGK++R  L+   A    V+    +    A+E IH YSLIHDDLP+
Sbjct: 31  DDKLRASMAYSLMAGGKRLRPILLMAAADAVGVDGTKFITAACALEMIHTYSLIHDDLPA 90

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  YDE TAI+AG+ LLT AF +I   +     ++ ++ +L +    
Sbjct: 91  MDNDDYRRGKLTNHKVYDEGTAILAGDALLTLAFTVILRQQ-----DVPAERLLRVVDET 145

Query: 155 ----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G +GM+GGQMLD++ E   I   ++  +   KTGAL   A   GAI+A AS+ +  
Sbjct: 146 GRAAGAEGMVGGQMLDLEAENRRISMEELRRVHMGKTGALFRAALRCGAILAGASERQLA 205

Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            L  + ++ G+ FQ+ DD+LD     ED+ K
Sbjct: 206 ALTAYADHFGLAFQITDDILDVIGTAEDIGK 236


>gi|294054659|ref|YP_003548317.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 294

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 127/233 (54%), Gaps = 10/233 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     +KL +  +R++T +D LL       +  H  RL  A+RY++  GGK++R  LV 
Sbjct: 1   MEASFKAKLSQYQQRVETGIDTLLPS-----EDTHPVRLHRAMRYSMEAGGKRLRPVLVL 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             + L +      +    AIEC+H Y+LIHDDLPS+DN  +RRG+P+ H Q+DE TA++A
Sbjct: 56  ALSELADSGQ-DPIAAAVAIECLHTYTLIHDDLPSLDNSDLRRGRPSCHKQFDEPTAVLA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ LLT+AFE++S         +   L+  L    G + ++GGQ  DI +E   +D   +
Sbjct: 115 GDALLTFAFELLSREYAS-SPELAVGLIQDLADASGSRRLIGGQQEDIDNEGKPVDADTL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             I + KT AL+  A   G           + ++  G +LG+ FQ+ DD+LD 
Sbjct: 174 QYIHENKTAALLTAALSMGLRFTQPGAQALQLIQKVGFHLGMTFQIVDDILDA 226


>gi|300715575|ref|YP_003740378.1| Geranyltranstransferase [Erwinia billingiae Eb661]
 gi|299061411|emb|CAX58523.1| Geranyltranstransferase [Erwinia billingiae Eb661]
          Length = 299

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  L++A+ Y ALLGGK++R FLV     +   +        AA+ECIH YSLIHDDLP
Sbjct: 28  QNSPLVNAMEYGALLGGKRLRPFLVYATGEMLGADDAALDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+PT HI++ E TAI+AG+ L T AF I++ +P   +    R  ++  L  
Sbjct: 88  AMDDDSLRRGQPTCHIKFGEDTAILAGDALQTLAFSILADTPMPGVSAEYRVAMLSELAQ 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +D   +  I + KTGAL+  A   GA+ A     E+ R 
Sbjct: 148 ASGVAGMCGGQALDLAAEGQQVDLAALEQIHRHKTGALIRSAVRLGALAA----GERGRA 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  +   +G+ FQ+ DD+LD   D
Sbjct: 204 ALPALDRYANAIGLAFQVQDDILDVVGD 231


>gi|77464716|ref|YP_354220.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
 gi|77389134|gb|ABA80319.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 289

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 127/202 (62%), Gaps = 8/202 (3%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           ++ A+RYA+ GGK++R FLV E A L  +    A+   A+IE +H YSL+HDD+P MD+ 
Sbjct: 30  VVHAMRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDD 89

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG PTVH ++DE TA++AG+ L T AFE+++ P       +R +L+ SL    G +G
Sbjct: 90  DLRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAAVRIELVASLAKASGAEG 148

Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LDI  E     +   Q+  +Q  KTGAL+ ++ E+GAI+    Q ++  LR + 
Sbjct: 149 MVLGQALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAIL---GQADRVPLRRYA 205

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
             LG+ FQ+ADD+LD E D  K
Sbjct: 206 TALGLAFQIADDILDVEGDAEK 227


>gi|116511680|ref|YP_808896.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107334|gb|ABJ72474.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 301

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 14/195 (7%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +Y+L+ GGK+IR  L       F++   TA  +V AA+E IH  SLIHDDLP+MDN   R
Sbjct: 46  KYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMDNDDYR 105

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQ 157
           RGK T H ++DE TAI+AG+ L    F ++SS       ++ +Q ++SLT  +    G  
Sbjct: 106 RGKLTNHKKFDEATAILAGDTLFFDPFYVLSS------SDLSAQTIVSLTRELAYASGSY 159

Query: 158 GMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+ GQ+LD+  E  D   TQ+  I ++KTG L+ F   +  I+A  +  E E+LR  G+
Sbjct: 160 GMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLRVVGQ 219

Query: 216 NLGIIFQLADDLLDC 230
            LG+ FQ+ DD+LD 
Sbjct: 220 ILGLAFQIRDDILDV 234


>gi|125624487|ref|YP_001032970.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493295|emb|CAL98263.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
          Length = 301

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 14/195 (7%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +Y+L+ GGK+IR  L       F++   TA  +V AA+E IH  SLIHDDLP+MDN   R
Sbjct: 46  KYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAAALEMIHTGSLIHDDLPAMDNDDYR 105

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQ 157
           RGK T H ++DE TAI+AG+ L    F ++SS       ++ +Q ++SLT  +    G  
Sbjct: 106 RGKLTNHKKFDEATAILAGDTLFFDPFYVLSS------SDLSAQTIVSLTRELAYASGSY 159

Query: 158 GMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+ GQ+LD+  E  D   TQ+  I ++KTG L+ F   +  I+A  +  E E+LR  G+
Sbjct: 160 GMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVAAGIVAQKTNQEIEKLRVVGQ 219

Query: 216 NLGIIFQLADDLLDC 230
            LG+ FQ+ DD+LD 
Sbjct: 220 ILGLAFQIRDDILDV 234


>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
 gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
          Length = 292

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 12/203 (5%)

Query: 38  RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+  A+ Y AL GGK++R  L+   A          L + +A+E IH YSLIHDDLP MD
Sbjct: 30  RVDEAMAYSALAGGKRLRPILLMAAADAVGGKGTDFLPLASALEMIHTYSLIHDDLPEMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154
           N   RRG+ T H  + +  A++AG+GLLT AFE+++  K      +   LM+ + H I  
Sbjct: 90  NDDYRRGRLTNHKVFGQAMAVLAGDGLLTQAFEVMTEQK-----GVDPALMVEIIHLIAR 144

Query: 155 --GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+GGQ LDI  +++ ++  ++  + + KTGAL   A  SGA++   S++E   L
Sbjct: 145 CAGPEGMVGGQALDINAEEKHLEPAEMKQLHEAKTGALFIAAIRSGALLGGGSKDEVNAL 204

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             F    G+ FQ+ DD+LD E D
Sbjct: 205 TKFATFFGLAFQITDDILDVEGD 227


>gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
           27560]
 gi|149735562|gb|EDM51448.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
           27560]
          Length = 296

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 4/196 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++ A+ Y+L  GGK++R  LV E   LF  +   A    AA+E IH YSL+HDDLP+MDN
Sbjct: 33  IIEAMNYSLKAGGKRLRPMLVLETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAMDN 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156
              RRGK T H  Y E   I+AG+GLL  A+E +S    + K   R+ L ++ L +  G+
Sbjct: 93  DMYRRGKKTTHAVYGEDIGILAGDGLLNMAYETMSMAILKSKYPQRAALAMNILAYKAGI 152

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ +D+  +++  D   +  I K+KT AL+  A   GAI+A   +   E +    
Sbjct: 153 YGMIGGQTVDVINENKEKDIDTINFIHKLKTAALIEGAMMVGAILAGVDEQAVETVEEIA 212

Query: 215 ENLGIIFQLADDLLDC 230
            N+GI FQ+ DD+LD 
Sbjct: 213 TNVGIAFQIQDDILDV 228


>gi|269965070|ref|ZP_06179235.1| geranyltranstransferase [Vibrio alginolyticus 40B]
 gi|269830373|gb|EEZ84598.1| geranyltranstransferase [Vibrio alginolyticus 40B]
          Length = 294

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q N+++++  LD L  Q            L+ A++Y LL GGK++R FLV 
Sbjct: 1   MQQTLTSFQQRNNQQLNLWLDQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AAIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173
           G+ L T AF II+    SP  + +   R  ++ +L H+ G  GM  GQ LD+  ++  + 
Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQ---RINMIKALAHSSGASGMCVGQALDLGAENRQVS 168

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
             ++  I + KTGAL+  A + GA+ A     E    L  + + +G+ FQ+ DD+LD   
Sbjct: 169 LEEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|187735758|ref|YP_001877870.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 297

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 127/228 (55%), Gaps = 17/228 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + E    ID  LD LL       +T H      A+RY++  GGK++R  L    A     
Sbjct: 10  ITEQCALIDAALDRLLPAEDESPETIHK-----AMRYSIFAGGKRMRPVLCLAAAEACGG 64

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             + AL    A+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LLT A
Sbjct: 65  LAVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDALLTEA 124

Query: 128 FEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           F +I+    + +  ++D +R      L    G   ++GGQ+LD++ E   + E +V  + 
Sbjct: 125 FAVIAQVDDTERYTVRDYVR-----ELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTVY 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + KT AL+  A   G + A+A++++ E L  FG NLG+ FQ+ DD+LD
Sbjct: 180 EGKTAALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILD 227


>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
 gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
          Length = 316

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 114/199 (57%), Gaps = 4/199 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +++  A+RY+LL GGK++R  L      L   N   A+    A+E IH  SLIHDDLP
Sbjct: 49  YPEKIYEAMRYSLLAGGKRLRPILCLATCELSGGNIEMAMPTACALEMIHTMSLIHDDLP 108

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           SMDN   RRG+ T H  Y E  AI+AG+GLL+YAFE + +    +      Q++  L   
Sbjct: 109 SMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVVTQTKNVLPKQVLQVIARLGKA 168

Query: 154 IGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            G  G++GGQ++D+  E I    E  +  I   KTGAL+  +   GAI+A  SQ    RL
Sbjct: 169 SGAAGLVGGQVVDLASEGISQVSEKTLHFIHTHKTGALLEASVVCGAILADVSQANLYRL 228

Query: 211 RCFGENLGIIFQLADDLLD 229
             + +N+G+ FQ+ DD+LD
Sbjct: 229 ERYAQNIGLAFQIVDDILD 247


>gi|325131595|gb|EGC54302.1| geranyltranstransferase [Neisseria meningitidis M6190]
          Length = 298

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 116/199 (58%), Gaps = 5/199 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN
Sbjct: 36  LHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDN 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT HI+Y E  A++ G+ L T AF+++S P T+L    +  ++  L    G +
Sbjct: 96  DSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSR 154

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFG 214
           GM GGQ +D+ +      Q  + Q   +KTGAL+  A   GA+   + S++    L  + 
Sbjct: 155 GMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYA 214

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG+ FQ+ DD+LDCE D
Sbjct: 215 AKLGLAFQVIDDVLDCEAD 233


>gi|262402761|ref|ZP_06079322.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC586]
 gi|262351543|gb|EEZ00676.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC586]
          Length = 294

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/241 (37%), Positives = 132/241 (54%), Gaps = 26/241 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q NS+++D  L+ +  QT           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNSQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +    +N L      +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ G
Sbjct: 55  QMLGCELNELDT--PASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILTG 112

Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
           + L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  +   ++
Sbjct: 113 DALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEEL 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEE 232
             I + KTGALM  A   GA+ A     EK R     L  + + +G+ FQ+ DD+LD   
Sbjct: 173 ETIHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYADAVGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 297

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 7/212 (3%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + +   + YA+L GGK++R FL+     L N N    ++   A+E IH YSL+HD
Sbjct: 25  ELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H  + E   I+ G+ LLTYAF ++S    +L  + +   ++S 
Sbjct: 85  DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISK 144

Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T    G+ GM+GGQM+DIQ E   ID   +  I   KTG L+    E   I+A+  ++++
Sbjct: 145 TSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEKDKR 204

Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           E L  + + +G+ FQ+ DD+LD E   EDL K
Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236


>gi|45656187|ref|YP_000273.1| farnesyl-diphosphate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599421|gb|AAS68910.1| geranyltranstransferase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 332

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 14/220 (6%)

Query: 26  QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           QT S +  Q    L  A++Y+L+ GGK++R  L               L +GA++ECIH 
Sbjct: 43  QTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLECIHT 102

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLPSMDN   RRG PT+H ++ E TAI+AG+ L ++AF  IS  + +  D+   
Sbjct: 103 YSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDHFLH 162

Query: 145 QLMLSLTH-NIGLQGMLGGQMLDIQ--DEFIDET-------QVFMIQ---KMKTGALMCF 191
           + +L + H   G  GM+ GQ+ D+Q   E + E        ++ M+Q   ++KTGAL+  
Sbjct: 163 RNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGALIKS 222

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   G  +    +  +  L  +GE+LG++FQ+ DD+LD E
Sbjct: 223 ALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDILDVE 262


>gi|313683408|ref|YP_004061146.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994]
 gi|313156268|gb|ADR34946.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994]
          Length = 282

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 6/188 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L+      +N   + +A     AIE +H YSLIHDDLP+MDN  +RRG PT+
Sbjct: 33  GGKRFRPALLLGVVRAYNPLLIQSAYHAALAIELLHTYSLIHDDLPAMDNADLRRGIPTL 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDEV+AI+AG+ L TYAFE++S+      D +  +L+ SL HN G +GM+ GQ +D 
Sbjct: 93  HKTYDEVSAILAGDALNTYAFEVLSN--APFADRVIVKLIRSLAHNGGAEGMVLGQAIDC 150

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             ++  ++  QV M+   KTG L+  A + GA +     +  + L  FG +LG++FQ+ D
Sbjct: 151 HFENFRLELDQVKMLHIHKTGKLIAAALQMGAFIV-GRDDMAQELYDFGIDLGLLFQIQD 209

Query: 226 DLLDCEED 233
           D+LD  ++
Sbjct: 210 DILDVTQN 217


>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
           nagariensis]
 gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
           nagariensis]
          Length = 312

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 126/225 (56%), Gaps = 10/225 (4%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           + +K ++  LD+ + Q       ++ D L  ++RY+LL GGK++R  L      L   + 
Sbjct: 28  DRAKLVNKALDEAVPQ-------KYPDTLYESMRYSLLAGGKRVRPALCLAACELIGGDV 80

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             AL    A+E IH  SLIHDDLPSMDN   RRG+PT H  Y E  AI++G+ LLTYAFE
Sbjct: 81  QAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSGDALLTYAFE 140

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGA 187
            I+     +      ++++ L    G +G++ GQ++DIQ  D+ +    +  I   KT A
Sbjct: 141 HIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLKYIHLHKTAA 200

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +   GAI+  A +   E+LR +  N+G+ FQ+ DD+LD  +
Sbjct: 201 LLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQ 245


>gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 288

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 128/222 (57%), Gaps = 11/222 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           N  +ID +L + L +     +T    RL  A+RY++L GGK+IR  L+            
Sbjct: 5   NKYKIDEMLXNYLAK-----ETGECTRLQEAMRYSVLQGGKRIRPILMRLAYEAVGGTGN 59

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +  AIE +H YSLIHDDLP+MDN  +RRG PT H+++DE TAI+AG+GLLT AFEI
Sbjct: 60  IAPYM-CAIEFVHTYSLIHDDLPAMDNDALRRGLPTNHVKFDEATAILAGDGLLTLAFEI 118

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGA 187
           +        D  ++     L    G  GM+ GQM D+  E   E  + M++K+   KTGA
Sbjct: 119 MLQDLVSDMDPAKAIAANILATGAGASGMVLGQMYDMFYEG-KEISIEMLEKIQLNKTGA 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  A + GA++ + S++E   L  +G  LG +FQ+ DD+LD
Sbjct: 178 LIKSALKMGAVLGYGSESELFALELYGIYLGKVFQIIDDILD 219


>gi|91225061|ref|ZP_01260283.1| geranyltranstransferase [Vibrio alginolyticus 12G01]
 gi|91190004|gb|EAS76275.1| geranyltranstransferase [Vibrio alginolyticus 12G01]
          Length = 294

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q N+++++  LD L  Q            L+ A++Y LL GGK++R FLV 
Sbjct: 1   MQQTLTSFQQRNNQQLNLWLDQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AAIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173
           G+ L T AF II+    SP  + +   R  ++ +L H+ G  GM  GQ LD+  ++  + 
Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQ---RINMIKALAHSSGASGMCIGQALDLGAENRQVS 168

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
             ++  I + KTGAL+  A + GA+ A     E    L  + + +G+ FQ+ DD+LD   
Sbjct: 169 LEEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 302

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 8/212 (3%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q  + L  A+ Y+L+ GGK++R  LV   A     +   A+ V  A+E +H YSLIHDDL
Sbjct: 32  QVPETLSRAMDYSLMAGGKRLRPLLVVAAAEALGGSRDAAMPVACAVEMVHTYSLIHDDL 91

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSL 150
           P++DN   RRGKPT H  + E  AI+AG+GLLT+AF  +  +S K  +       ++  L
Sbjct: 92  PALDNDDFRRGKPTNHKVFGEAMAILAGDGLLTHAFYSVVQASRKQGVPAEASLAIVEEL 151

Query: 151 THNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           +   G  GM+GGQ+ D+Q E    D  Q+  I + KTG L+ F+  +G  +A  +  + E
Sbjct: 152 SRFAGPGGMVGGQVADMQGEQGVTDLDQLRYIHEHKTGDLIVFSVRAGGHIASGNAEQLE 211

Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
            L  +G  LG  FQ+ DD+LD    E  L KK
Sbjct: 212 ALERYGRALGHAFQIQDDILDLIGDESKLGKK 243


>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
 gi|125713574|gb|ABN52066.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
          Length = 295

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L SA+RY+L+ GGK++R  L      +   +    L    A+E IH YSLIHDDLP+MDN
Sbjct: 32  LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156
              RRG+PT H  Y E  AI+AG+GLL  AFEI+     +  D  R S+    +    G+
Sbjct: 92  DDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGM 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQ++D++ E   +D   +  + ++KTGAL+     S AI+  A  ++ ++L  F 
Sbjct: 152 NGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFA 211

Query: 215 ENLGIIFQLADDLLDCE---EDLPKK 237
           ENLG+ FQ+ DD+LD E   E L KK
Sbjct: 212 ENLGLAFQIKDDILDVEGSSEKLGKK 237


>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
 gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
          Length = 306

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 128/229 (55%), Gaps = 14/229 (6%)

Query: 9   LQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           LQ+  +RI+  L   L L TA          L+ A+RY  LLGGK+IR FLV     +  
Sbjct: 19  LQQVQERINAFLAQQLNLNTAP-------SPLIEAMRYGVLLGGKRIRPFLVYATGRMLG 71

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            + +      A +E IH YSLIHDDLP+MDN  +RRG+PT HI +DE TAI+AG+ L  +
Sbjct: 72  ADLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDALQAF 131

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           AFEI++     L    +  L+ +L    G +GM  GQ LD+  + + I   ++  I + K
Sbjct: 132 AFEILTQAPA-LSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIHRNK 190

Query: 185 TGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           TGAL+  A + G I +     +   ++L+ +   +G+ FQ+ DD+LD E
Sbjct: 191 TGALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIE 239


>gi|293652046|pdb|3M9U|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367
 gi|293652047|pdb|3M9U|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367
 gi|293652048|pdb|3M9U|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367
 gi|293652049|pdb|3M9U|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367
 gi|312208182|pdb|3PDE|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Isoprenyl Diphosphate And Magnesium
 gi|312208183|pdb|3PDE|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Isoprenyl Diphosphate And Magnesium
 gi|312208184|pdb|3PDE|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Isoprenyl Diphosphate And Magnesium
 gi|312208185|pdb|3PDE|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Isoprenyl Diphosphate And Magnesium
          Length = 309

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 7/198 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPS 94
           +L +A+ Y++L GGK++R  L         V  +     R   A+E +H YSLIHDDLP+
Sbjct: 35  QLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPA 94

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRG+PT H+++    A +AG+GLLT AF+ +++  T L   +++ L+ +L    
Sbjct: 95  MDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTA--TDLPATMQAALVQALATAA 152

Query: 155 GLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+ GQ  DIQ E ++   +Q+ ++ K KTGAL+ +A ++G I+  A + +      
Sbjct: 153 GPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQ 212

Query: 213 FGENLGIIFQLADDLLDC 230
           F +  G+ FQ+ DD+LD 
Sbjct: 213 FADAFGLAFQIYDDILDV 230


>gi|256027758|ref|ZP_05441592.1| dimethylallyltransferase [Fusobacterium sp. D11]
 gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11]
 gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11]
          Length = 297

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 7/212 (3%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + +   + YA+L GGK++R FL+     L N N    ++   A+E IH YSL+HD
Sbjct: 25  ELSYPETIAKGMEYAILNGGKRLRPFLLFVILELLNENINKGVKSAIALEMIHSYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H  + E   I+ G+ LLTYAF ++S    +L  + +   ++S 
Sbjct: 85  DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISK 144

Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T    G+ GM+GGQM+DI+ E   ID   +  I   KTG L+    E   I+A+  +++K
Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKK 204

Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           E L  + + +G+ FQ+ DD+LD E   EDL K
Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236


>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
 gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
 gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
          Length = 298

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L SA+RY+L+ GGK++R  L      +   +    L    A+E IH YSLIHDDLP+MDN
Sbjct: 35  LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDN 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156
              RRG+PT H  Y E  AI+AG+GLL  AFEI+     +  D  R S+    +    G+
Sbjct: 95  DDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGM 154

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQ++D++ E   +D   +  + ++KTGAL+     S AI+  A  ++ ++L  F 
Sbjct: 155 NGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFA 214

Query: 215 ENLGIIFQLADDLLDCE---EDLPKK 237
           ENLG+ FQ+ DD+LD E   E L KK
Sbjct: 215 ENLGLAFQIKDDILDVEGSSEKLGKK 240


>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
 gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
          Length = 298

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 7/206 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L SA+RY+L+ GGK++R  L      +   +    L    A+E IH YSLIHDDLP+MDN
Sbjct: 35  LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDN 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156
              RRG+PT H  Y E  AI+AG+GLL  AFEI+     +  D  R S+    +    G+
Sbjct: 95  DDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGM 154

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQ++D++ E   +D   +  + ++KTGAL+     S AI+  A  ++ ++L  F 
Sbjct: 155 NGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQKLDEFA 214

Query: 215 ENLGIIFQLADDLLDCE---EDLPKK 237
           ENLG+ FQ+ DD+LD E   E L KK
Sbjct: 215 ENLGLAFQIKDDILDVEGSSEKLGKK 240


>gi|330686046|gb|EGG97669.1| geranyltranstransferase [Staphylococcus epidermidis VCU121]
          Length = 288

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 122/208 (58%), Gaps = 7/208 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L  ++ Y+L  GGK+IR  L+     + N ++   ++   A+E IH YSLIHDDLP+
Sbjct: 22  NTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQGMQSALALEMIHTYSLIHDDLPA 81

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  Y E  AI+AG+ LL  AFE++S   + L D  + +++  L    
Sbjct: 82  MDNDDYRRGKLTNHKVYGEWKAILAGDALLPKAFELVSYD-SALSDTKKVKVIQRLAFAS 140

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ LD+Q  D+ ID + +  I + KTGAL+ FA  S   +A   ++    L  
Sbjct: 141 GHLGMVGGQTLDMQSEDKAIDISTLESIHRTKTGALLTFAIMSAVDIADTDEHTSAMLNE 200

Query: 213 FGENLGIIFQLADDLLDC---EEDLPKK 237
           F ++LG++FQ+ DDLLD    E+ L KK
Sbjct: 201 FSDHLGLMFQIKDDLLDIYGDEQKLGKK 228


>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
 gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
          Length = 309

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 11/233 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L S L+E  + ++  LD         +     +++  A+RY+LL GGK++R  L   
Sbjct: 16  NFELASYLKEKKQLVEAALD-------QSLHITRPEKIYEAMRYSLLAGGKRLRPILCLT 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       +L    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG
Sbjct: 69  TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--- 177
           + LL+YAFE +++    +       ++  L   +G  G++GGQ+LD++ E   +  V   
Sbjct: 129 DALLSYAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             I   KTGAL+  +  SGAI+A A   + ERL  + +N+G+ FQ+ DD+LD 
Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDV 241


>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 295

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 15/211 (7%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +D+L +++ Y+L+ GGK++R  L+   A     +    +    A+E IH YSLIHDDLP+
Sbjct: 31  DDKLRASMAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTYSLIHDDLPA 90

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  YDE TAI+AG+ LLT AF +I   +     ++ ++ +L +   I
Sbjct: 91  MDNDDYRRGKLTNHKAYDEGTAILAGDALLTLAFTVILRQQ-----DVPAERLLRIVDEI 145

Query: 155 ----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G +GM+GGQMLD++ E   I   ++  +   KTGAL   A  SGAI+A AS+ +  
Sbjct: 146 SRSAGAEGMVGGQMLDLEAENRRISMEELQRVHMGKTGALFRAALRSGAILAGASEQQLA 205

Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            L  + ++ G+ FQ+ DD+LD     ED+ K
Sbjct: 206 ALTTYADHFGLAFQITDDILDVVGTAEDIGK 236


>gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 300

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 123/217 (56%), Gaps = 15/217 (6%)

Query: 28  ASHMQTQ--HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           A+ + TQ   +  L+ A++Y  LLGGK+ R FL      +  V         AA+ECIH 
Sbjct: 23  ANWLATQPFADKALIKAMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVECIHA 82

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLP+MD+  +RRG+PT HI +DE TAI+AG+ L T AFEI+++ +     N + 
Sbjct: 83  YSLIHDDLPAMDDDALRRGQPTCHIAFDEATAILAGDALQTLAFEILANGQLSQDGNTQR 142

Query: 145 QLMLS-LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAH 201
             M+S L    G  GM  GQ LD++ E   +   Q+ +I + KTGAL+  A   GA+ A 
Sbjct: 143 IAMVSELAKASGAAGMCLGQTLDLEAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAA- 201

Query: 202 ASQNEK-----ERLRCFGENLGIIFQLADDLLDCEED 233
               EK      +L  + E +G+ FQ+ DD+LD   D
Sbjct: 202 ---GEKGIAILPQLDKYAEAIGLAFQVQDDILDVISD 235


>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
 gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
          Length = 298

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 114/204 (55%), Gaps = 14/204 (6%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++RY+L+ GGK++R  L+   A          L    A+E IH YSLIHDDLP+MD
Sbjct: 36  RLAESMRYSLMAGGKRLRPILLMAAADAVGAKGTDYLTTACALEMIHTYSLIHDDLPAMD 95

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-----SSPKTQLKDNIRSQLMLSLT 151
           N   RRGK T H  + +  A++AG+ LLT AFE+I     + P T L+       +  ++
Sbjct: 96  NDDYRRGKLTNHKVFGDGMAVLAGDALLTLAFEVIGRQQHTDPATLLR------TVQEIS 149

Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G+ GM+GGQ +D++ E   I   Q+  +   KTGAL   A  SGAI+A AS+ +   
Sbjct: 150 TAAGMNGMVGGQAIDLESEGHRISMEQLRKMHMGKTGALFRAALRSGAILAGASEKQLAA 209

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E  G+ FQ+ DD+LD   D
Sbjct: 210 LTAYAEGFGLAFQITDDILDVTGD 233


>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 294

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 126/227 (55%), Gaps = 7/227 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L+E  K    I+D  +L+    +      RL  A++Y+L +GGK++R  L      +  
Sbjct: 2   ELKEYLKERKAIIDREILKYLPSVPP-FGKRLYEAVKYSLTVGGKRLRPILCMAGCEVVG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N+  AL    AIE IH YSLIHDDLP+MDN  +RRG PT   ++DE TAI+AG+ LL  
Sbjct: 61  GNYEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDALLNR 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKM 183
           AFE++S         I+  ++  ++   G+ GM+ GQ  D+  E   +    ++  I + 
Sbjct: 121 AFEVLSQWNFDCDRKIK--VIEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRH 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTG L+  +  SG I    S+ E   L+ +G+++G+ FQ+ DD+LD 
Sbjct: 179 KTGRLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDV 225


>gi|304312212|ref|YP_003811810.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
 gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
          Length = 297

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 9/237 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L + LQ    R++T L+    +     Q     +L  A+ YA++ GGK++R  L  
Sbjct: 1   MTFDLHAYLQTAQFRVNTRLEYWFAK-----QNTTAAKLSEAMHYAVMNGGKRLRPVLAF 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   A     A+E +H YSL+HDDLP+MDN  +RRG PT HI +DE TAI+A
Sbjct: 56  AAAEACGTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           G+ L   AFE+++S +   +   I+ +++ SL    G  GM GGQ LD+    + +D   
Sbjct: 116 GDALQCLAFEVLASSELPSMTTPIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHG 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  I ++KTG L+  A   GA+ AHA ++    L  +   LG+ +Q+ DD+LD   D
Sbjct: 176 LETIHRLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGD 232


>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
           elongatus BP-1]
 gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
           elongatus BP-1]
          Length = 307

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 11/229 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+E    ++  L+       + +   + +++  A+RY+L+ GGK++R  L      
Sbjct: 17  LKAYLKERQALVEAALE-------ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCE 69

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       A+    A+E IH  SLIHDDLP+MDN   RRGKPT H  Y E  AI+AG+GL
Sbjct: 70  LMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGL 129

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           L YAFE +      +      +++  L H +   G++GGQ++D++ E    I    +  I
Sbjct: 130 LAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFI 189

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+  +  SGA++  A +++  RL  +  N+G+ FQ+ DD+LD
Sbjct: 190 HSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILD 238


>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
           elongatus]
          Length = 307

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 4/205 (1%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + +   + +++  A+RY+L+ GGK++R  L      L       A+    A+E IH  SL
Sbjct: 34  ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGTVEMAMPTACALEMIHTMSL 93

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP+MDN   RRGKPT H  Y E  AI+AG+GLL YAFE +      +      +++
Sbjct: 94  IHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVEQTKNVPAEYLLKIV 153

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             L H +   G++GGQ++D++ E    I    +  I   KTGAL+  +  SGA++  A +
Sbjct: 154 ARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHSHKTGALLEASVVSGALLTGAHE 213

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
           ++  RL  +  N+G+ FQ+ DD+LD
Sbjct: 214 SDVARLSRYAANIGLAFQIVDDILD 238


>gi|255284124|ref|ZP_05348679.1| geranyltranstransferase [Bryantella formatexigens DSM 14469]
 gi|255265298|gb|EET58503.1| geranyltranstransferase [Bryantella formatexigens DSM 14469]
          Length = 295

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL A+ Y++  GGK++R  L+ E   LF  N        AAIE IH +SL+HDDLP+MDN
Sbjct: 32  LLEAMNYSMTAGGKRLRPLLMQETYRLFGGNGKVVEPFMAAIEMIHTHSLVHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGL 156
              RRGK T H+ Y E  AI+AG+GLL YA+E           N    + M  LT   G+
Sbjct: 92  DEYRRGKKTTHVVYGEAMAILAGDGLLNYAYETACRAFALEPGNPHIGEAMTVLTTKTGV 151

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GMLGGQ +D+Q     +   ++  I ++KT AL+  +  +GAI+A AS+ E   +    
Sbjct: 152 YGMLGGQAVDVQSVGGTLSREKLDFIYRLKTSALIECSMMTGAILAGASEEEIRTIGQVA 211

Query: 215 ENLGIIFQLADDLLDC 230
            ++G+ FQ+ DD+LD 
Sbjct: 212 SDVGLAFQIQDDILDV 227


>gi|119474634|ref|ZP_01614987.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
 gi|119450837|gb|EAW32070.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
          Length = 309

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/245 (37%), Positives = 143/245 (58%), Gaps = 13/245 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN----DRLLSAIRYALL-GGKKIRS 55
           MN    + L +   R+D +L + L   +S      +     RL  A+ Y+L+ GGK+IR 
Sbjct: 1   MNHDFSAFLMQTKTRVDQLLGEHLGSFSSSYAAVDSGIYLTRLQQAMHYSLINGGKRIRP 60

Query: 56  FLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
            LV   A+    +    +     R+  +IE IH YSLIHDDLP+MD+  +RRG+PT H  
Sbjct: 61  VLVYATAAAITTDVSPVVTANLDRIACSIEMIHAYSLIHDDLPAMDDDDLRRGQPTCHRA 120

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-- 168
           +DE TAI+AG+ L   AFE+++   T+   +I   L+  LT   G +GM+GGQ++D++  
Sbjct: 121 FDEATAILAGDALQARAFELLTE-LTECPPHIHLNLLRILTQASGQRGMVGGQLIDLESV 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+ ID  Q+  I ++KTGAL+  +   GA +  A + + E+L C+G+ +G+ FQ+ DD+L
Sbjct: 180 DKPIDVQQLETIHRLKTGALIRASIAMGATLTGADRQQLEQLDCYGDAIGLAFQVHDDIL 239

Query: 229 DCEED 233
           D E D
Sbjct: 240 DIEAD 244


>gi|37527745|ref|NP_931090.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
           synthase) [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|36787181|emb|CAE16258.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
           synthase) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 305

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 14/232 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65
           ++ +E  K     ++++L+ T S +    N+ L+ A+++  LLGGK++R FLV     +F
Sbjct: 7   TQFKEQLKICQQRVNNVLISTLSSVAFA-NNPLVHAMQHGTLLGGKRLRPFLVYAVGEMF 65

Query: 66  --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             + N+L A    AA+ECIH +SLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG+ L
Sbjct: 66  GLSANNLDA--PAAAVECIHAFSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDAL 123

Query: 124 LTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178
              AFEI+S    P     D  R +++  L    G+ GM GGQ LD+  E   ID   + 
Sbjct: 124 QALAFEILSKREMPDVTTAD--RLEMVAELATASGIAGMCGGQALDLAAEGRHIDLHMLE 181

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLD 229
            I + KTGAL+  A   GA  A  S ++    L  + + +G+ FQ+ DD+LD
Sbjct: 182 QIHRHKTGALIRCAVRMGAYGAGQSGHDALPELDQYAQAIGLAFQVQDDILD 233


>gi|294789125|ref|ZP_06754364.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453]
 gi|294482866|gb|EFG30554.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453]
          Length = 297

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 123/216 (56%), Gaps = 5/216 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++LL+ A     Q  + L  A+RY  LGG K++R  LV   A L +           A+E
Sbjct: 18  EILLERALPSINQAPETLHEAMRYVTLGGGKRLRPLLVWAAAELGDSVQAACEAAAVAVE 77

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
           CIH YSL+HDD+P+MDN  +RRGKPT H+QYDE TA++ G+ L T AF+++S+  T L  
Sbjct: 78  CIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEPTALLVGDALQTLAFDVLST-ATALSP 136

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAI 198
             + +++  L    G  GM GGQ +D+ +  +D +Q+ + Q    KTGAL+  A   GA+
Sbjct: 137 ARQIRMINVLAKASGSMGMAGGQAIDLANVGVDLSQIQLEQMHGWKTGALIRAAVALGAL 196

Query: 199 M-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                  N    L  +   LG+ FQ+ DD+LDCE D
Sbjct: 197 SCPDLDDNALAALDNYATKLGLAFQVIDDVLDCEAD 232


>gi|260890388|ref|ZP_05901651.1| geranyltranstransferase [Leptotrichia hofstadii F0254]
 gi|260860008|gb|EEX74508.1| geranyltranstransferase [Leptotrichia hofstadii F0254]
          Length = 265

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 124/209 (59%), Gaps = 11/209 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLP 93
           +  A+ YA++ GGK+IR  L+     LF  N+  +      + AA+E IHCYSL+HDDLP
Sbjct: 1   MAEAMEYAVMNGGKRIRPVLMYMICDLFEKNNYKSYDKIKEIAAALEFIHCYSLVHDDLP 60

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRGK TVH +Y+E   ++ G+ LLT AF I+++ K+ L D  + +L+  L+  
Sbjct: 61  AMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIVANSKS-LGDKNKIELISKLSEY 119

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQ +D++ E   ++   +  I   KTG L+  A E   I  +    ++E++ 
Sbjct: 120 AGFFGMVGGQFVDMESENKKVEIDTLKYIHAHKTGKLLTAAIELPMIALNIESEKREKMV 179

Query: 212 CFGENLGIIFQLADDLLDCE---EDLPKK 237
            + + LGI FQ+ DD+LD E   E++ KK
Sbjct: 180 EYSKLLGIAFQIKDDILDIEGNFEEIGKK 208


>gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 297

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 7/212 (3%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + +   + YA+L GGK++R FL+     L N N    ++   A+E IH YSL+HD
Sbjct: 25  ELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNENINKGVKSAIALEMIHSYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H  + E   I+ G+ LLTYAF ++S    +L  + +   ++S 
Sbjct: 85  DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISK 144

Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T    G+ GM+GGQM+DIQ E   ID   +  I   KTG L+    E   I+A+  ++++
Sbjct: 145 TSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEKDKR 204

Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           E L  + + +G+ FQ+ DD+LD E   EDL K
Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236


>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
 gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
          Length = 365

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 113/200 (56%), Gaps = 3/200 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           QH  ++  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDL
Sbjct: 97  QHPQKINEAMRYSLLAGGKRVRPILCIASCELVGGDEGLAMPAACALEMIHTMSLIHDDL 156

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E TA++AG+ LL+ AFE ++     +  +   Q +  L  
Sbjct: 157 PCMDNDDLRRGKPTSHKIFGEDTAVLAGDALLSLAFEHVARNTKNVSSDRVVQAIAELGS 216

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G +G++ GQ++DI  E   +  + +  I   KT  L+  A   GAIM  A     ERL
Sbjct: 217 TVGSKGLVAGQIVDIDSEGKEVSLSTLEYIHVHKTAKLLEAAVVCGAIMGGADATSVERL 276

Query: 211 RCFGENLGIIFQLADDLLDC 230
           R +  ++G++FQ+ DD+LD 
Sbjct: 277 RKYARSIGLLFQVVDDILDV 296


>gi|222151415|ref|YP_002560571.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
 gi|222120540|dbj|BAH17875.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
          Length = 290

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 5/209 (2%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           +  S + +  + RL  ++ Y+L  GGK+IR   V         N +  L  G A+E IH 
Sbjct: 17  EVISGLYSAKDGRLFDSMHYSLSAGGKRIRPLFVLTTIDSLGGNAVDGLSFGVALEMIHT 76

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLP+MDN   RRGK T H  +DE TAI+AG+ LLT +F +I+  K     +I+ 
Sbjct: 77  YSLIHDDLPAMDNDDYRRGKLTNHKHFDEATAILAGDALLTDSFRMITEGK--FDADIKL 134

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            L+  L+   G +GM+ GQMLD++ E   ++  Q+  +   KTG L+  A  +  I+   
Sbjct: 135 PLISLLSEAAGSKGMVYGQMLDMEGEHQALELNQMEQVHSYKTGELIRAAFVAAGIIMKL 194

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +  + + L   G N+G++FQ+ DD+LD E
Sbjct: 195 TDEKIQLLDQIGRNVGLMFQIQDDILDVE 223


>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
 gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
          Length = 294

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 13/218 (5%)

Query: 31  MQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           ++ + N +++  A++Y++  GGK++R  L      LF  +   AL V  AIE IH YSLI
Sbjct: 21  LEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLI 80

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRGKPT H  Y E  AI+AG+GLL  AFE++   +  L++    Q +L
Sbjct: 81  HDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLI--RHALENPHDYQRIL 138

Query: 149 SLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
             T+ I    G +GM+GGQ++DI  Q+  +   ++  + + KTGAL+  +  +GA +A A
Sbjct: 139 KATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKTGALIEASVCAGAYIAGA 198

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
            + +   LR +   +G+ FQ+ DD+LD    EE L KK
Sbjct: 199 IEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKK 236


>gi|254228604|ref|ZP_04922028.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
 gi|262395026|ref|YP_003286880.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           Ex25]
 gi|151938783|gb|EDN57617.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
 gi|262338620|gb|ACY52415.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           Ex25]
          Length = 294

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 130/238 (54%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q N+++++  LD L  Q            L+ A++Y LL GGK++R FLV 
Sbjct: 1   MQQTLTSFQQRNNQQLNLWLDQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AAIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           G+ L T AF II+  +     +  R  ++ +L H+ G  GM  GQ LD+  ++  +   +
Sbjct: 112 GDALQTLAFTIIADGQLNPAAETQRINMIKALAHSSGANGMCVGQALDLGAENRQVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
           +  I + KTGAL+  A + GA+ A     E    L  + + +G+ FQ+ DD+LD   D
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISD 229


>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 364

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 124/226 (54%), Gaps = 11/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L E  K ++  LD+ +L        +  +++  A+RY+LL GGK++R  L    + L   
Sbjct: 77  LLEKGKSVNQALDNAIL-------IREPEKIHEAMRYSLLAGGKRVRPILCIAASELVGG 129

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ LL +A
Sbjct: 130 NESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFA 189

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMK 184
           FE +++    +  +   + +  L  +IG +G++ GQ++DI    +       +  I   K
Sbjct: 190 FEYVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHK 249

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           T AL+  +   GAI+   +  + ERLR F   +G++FQ+ DD+LD 
Sbjct: 250 TAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDV 295


>gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
 gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
          Length = 313

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 5/207 (2%)

Query: 32  QTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           + +H D +L  A+RYA+L GGK++R  LV             ALR   A E IH YSL+H
Sbjct: 32  EPEHLDVVLGLAMRYAVLDGGKRLRPLLVLAACEAVRGEADAALRAACATELIHAYSLVH 91

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLML 148
           DD+P MDN  +RRGKPTVH+Q+ E  A++AG+ L   AFE+++   +  +   ++++L  
Sbjct: 92  DDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDALQALAFELLTPDDEVAVPVGMQARLCR 151

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L    G  GM GGQ +D+    +  DE ++  + ++KTGAL+  +   GA   H +Q +
Sbjct: 152 LLARAAGSSGMAGGQAIDLASVGVKLDEERLRQMHRLKTGALLQASVMMGAACGHPTQAQ 211

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
           +  L  +G  +G+ FQ+ DD+LD   D
Sbjct: 212 QAALSDYGAAIGLAFQVVDDILDVTAD 238


>gi|311280690|ref|YP_003942921.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
 gi|308749885|gb|ADO49637.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
          Length = 299

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 13/211 (6%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   N  L+ A+ Y ALLGGK++R FLV    ++F V+  T     AA+ECIH YSL+HD
Sbjct: 25  QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGTMFGVSLTTLDAPAAAVECIHAYSLMHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MD+  +RRG+PT H+++ E  AI+AG+ L T AF I+S +P  ++ D  R  ++  
Sbjct: 85  DLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILSDAPMPEVADRDRIAMISE 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+ GM GGQ LD+Q E   +D   +  I + KTGAL+  A   GA+    S  EK
Sbjct: 145 LAQASGVAGMCGGQALDLQAEGQQVDLAALERIHRHKTGALIRAAVRLGAL----SAGEK 200

Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233
            R     L  + E++G+ FQ+ DD+LD   D
Sbjct: 201 GRAALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|260431854|ref|ZP_05785825.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415682|gb|EEX08941.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 288

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 8/199 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+ YA  GGK++R FLV E A L  ++   A+     IE +H YSL+HDDLP MD+  +R
Sbjct: 32  AMAYATQGGKRLRGFLVLESARLHGMDETCAIWPATGIEALHAYSLVHDDLPCMDDDDLR 91

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PTVH Q++E  A++AG+ L   AFE+ + P+    + IR+ L L+L    G +GM+ 
Sbjct: 92  RGRPTVHKQWNEGIAVLAGDALQALAFELCARPEVGPAE-IRADLALTLAQAAGARGMVL 150

Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ LDI  E   +      +  +Q  KTGAL+ ++  +GA +A       ER+R +   L
Sbjct: 151 GQALDIAAETAQQPLSLEDITRLQAGKTGALIEWSGCAGARLAG---ENPERMRLYSRAL 207

Query: 218 GIIFQLADDLLDCEEDLPK 236
           G+ FQ+ADD+LD E D+ K
Sbjct: 208 GLAFQIADDILDVEGDVQK 226


>gi|169350498|ref|ZP_02867436.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552]
 gi|169292818|gb|EDS74951.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552]
          Length = 282

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 122/203 (60%), Gaps = 15/203 (7%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            + ++  A++Y+LL GGK+IR  L+      + +N+   L    AIE IH YSLIHDDLP
Sbjct: 20  QDSKVKDAMKYSLLAGGKRIRPLLMLRIIQSYGLNYHDYLDAACAIEMIHTYSLIHDDLP 79

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN  +RRGKPT H Q+DE TAI+AG+GLL  A  +I      LK N  S+L ++L   
Sbjct: 80  GMDNDDLRRGKPTCHRQFDEATAILAGDGLLNEAANVI------LKANYNSELKIALLSI 133

Query: 154 I----GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +    G+ GM+ GQ LDI  +++  +  ++ +I   KTG L+  + + GA++A+   N+ 
Sbjct: 134 LYQASGVNGMILGQALDIKFENKKANRKELDLIHHHKTGDLISASMQMGALVANV--NDL 191

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           E  +  G  +G+ FQ+ DD+LD 
Sbjct: 192 ETFKEIGYKIGLAFQIQDDILDV 214


>gi|15234534|ref|NP_195399.1| GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|13432144|sp|P34802|GGPP1_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 1,
           chloroplastic; Short=GGPP synthase 1; Short=GGPS1;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1;
           AltName: Full=Dimethylallyltranstransferase 1; AltName:
           Full=Farnesyl diphosphate synthase 1; AltName:
           Full=Farnesyltranstransferase 1; AltName:
           Full=Geranyltranstransferase 1; Flags: Precursor
 gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
          Length = 371

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 8/196 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L      TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 106 AMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 165

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLSLTHNIGLQG 158
           RRGKPT H  + E  A++AG+ LL++AFE + S+  + +   +R  + +  L   IG +G
Sbjct: 166 RRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEG 225

Query: 159 MLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           ++ GQ++DI  E +D   V +     I   KT AL+  +   GAI+   S +E ERLR F
Sbjct: 226 LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKF 285

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 286 ARCIGLLFQVVDDILD 301


>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
 gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
          Length = 303

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 10/221 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR 74
           I+ +LD+ L    +  Q  H+     A+RY+LLGG K++R+ L    A L   N   A  
Sbjct: 25  IEIVLDEALPSETTAPQVLHD-----AMRYSLLGGGKRVRALLCYAAAELCATNATIADA 79

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSL+HDD+P MDN  +RRGKP+ H QYD+ TA++ G+ L + AF+++S+P
Sbjct: 80  AACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDATALLVGDALQSLAFDVLSTP 139

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFA 192
                 N +  ++  L    G  GM GGQ +D+    + + + ++  + K+KTGAL+  A
Sbjct: 140 TLCESANQQISMLNILAKASGSLGMAGGQAIDLASVGKALSQHELENMHKLKTGALIQAA 199

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              GA    A Q     +  + E++G+ FQ+ DD+LD E D
Sbjct: 200 ALLGASSGTAEQ--MSAVIVYAEHIGLAFQVVDDILDVEAD 238


>gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
 gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
          Length = 297

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 7/212 (3%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + + + + YA+L GGK++R FL+     L N +    ++   A+E IH YSL+HD
Sbjct: 25  ELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H  + E   I+ G+ LLTYAF ++S    +L  + +   ++S 
Sbjct: 85  DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNIISK 144

Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T    G+ GM+GGQM+DIQ E   ID   +  I   KTG L+    E   I+A+  ++++
Sbjct: 145 TSEYAGINGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKR 204

Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           E L  + + +G+ FQ+ DD+LD E   EDL K
Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236


>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 379

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 8/196 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L      TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 114 AMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 173

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLSLTHNIGLQG 158
           RRGKPT H  + E  A++AG+ LL++AFE + S+  + +   +R  + +  L   IG +G
Sbjct: 174 RRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAIGELAKAIGTEG 233

Query: 159 MLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           ++ GQ++DI  E +D   V +     I   KT AL+  +   GAI+   S +E ERLR F
Sbjct: 234 LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKF 293

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 294 ARCIGLLFQVVDDILD 309


>gi|292898693|ref|YP_003538062.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
 gi|291198541|emb|CBJ45649.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
 gi|312171554|emb|CBX79812.1| geranyltranstransferase [Erwinia amylovora ATCC BAA-2158]
          Length = 299

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 115/200 (57%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+ Y ALLGGK++R FLV     +   +        AAIECIH YSLIHDDLP+MDN
Sbjct: 32  LVNAMEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E +AI+AG+ L T AF I++ +P   +    R  ++  L    G+
Sbjct: 92  DSLRRGQPTCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGV 151

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213
            GM GGQ LD+  E    T  ++  I + KTGAL+  A   GA+ A  S       L  F
Sbjct: 152 AGMCGGQALDLAAEGKKVTLNELEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRF 211

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 212 ANAIGLAFQVQDDILDVTGD 231


>gi|260893255|ref|YP_003239352.1| Polyprenyl synthetase [Ammonifex degensii KC4]
 gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4]
          Length = 286

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 127/231 (54%), Gaps = 11/231 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L E ++ I+  LD  L    +     H      ++RY++LGG K++R  L+   A     
Sbjct: 7   LAEKARLIEEALDRYLPPEFAPPHPIHQ-----SMRYSVLGGGKRLRPALLLGAAEAVGA 61

Query: 68  NHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +    L + A  IE IHCYSL+HDDLP+MDN   RRG+PT H  + E  AI+ G+ LLT 
Sbjct: 62  DVAEDLLLAACGIELIHCYSLVHDDLPAMDNDDFRRGRPTSHRVFGEAIAILTGDALLTL 121

Query: 127 AFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQK 182
            FE+++      +    +  ++++ +    G +GM+GGQ+LD+      +  + +  I +
Sbjct: 122 GFELLARAALVARQGSEVGLRVIVEVARAAGSEGMVGGQVLDLGGSKNADPALLLEEIHR 181

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KTGAL   A  +GA++  A +   ++L  + E LG+ FQ+ DD+LD +E+
Sbjct: 182 KKTGALFVAAVRAGALLGGAQEEALQKLTLYAEELGLAFQIVDDILDLDEE 232


>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
           pyrophosphate synthetase [Syntrophus aciditrophicus SB]
 gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
           pyrophosphate synthetase [Syntrophus aciditrophicus SB]
          Length = 308

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 131/238 (55%), Gaps = 16/238 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + ++E   RID  +D  L       + +    L  A+RY+L  GGK+IR  L    A 
Sbjct: 13  LNAYIKEKKLRIDEAIDRYLPG-----EEESPGELFKAMRYSLFAGGKRIRPILCLAAAE 67

Query: 64  LF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               +V+    L V  A+E IH YSLIHDDLP+MDN   RRGKPT H  + +  AI+AG+
Sbjct: 68  AVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFIDET-- 175
            LLT AFE+++  +T     +  +++L +   I    G  GM+GGQ+ D++ E       
Sbjct: 128 ALLTEAFELMT--RTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLD 185

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +  I   KTGA++  +  +GAI++  S+     L  +G  +G++FQ+ADD+L+ E D
Sbjct: 186 TLNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGD 243


>gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
 gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
          Length = 294

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 124/242 (51%), Gaps = 17/242 (7%)

Query: 5   LPSKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
           LPS L E    ++  LD +L +  A         RL  A+RYA+L GGK++R  L     
Sbjct: 7   LPSYLDECRAAVNAALDAVLAMPEAGQPGADDPGRLREAMRYAVLQGGKRMRPVLTIAAC 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   AL    A+E IH YSL+HDDLP+MDN   RRGKPTVH+++    AI+ G+ 
Sbjct: 67  QAAGGDTAHALPAACALEMIHAYSLVHDDLPAMDNDLERRGKPTVHVEFGHANAILVGDA 126

Query: 123 LLTYAFEIISS-----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           LLT AFE+++      P+  + D +       L    G+ GM+GGQ LD+    +  D  
Sbjct: 127 LLTDAFEVLARGTEGVPRANIADAV-----TILARCAGINGMVGGQALDLIAGQDIADLE 181

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEEDL 234
            +  +  +KTG L   A   G + +  +  E   +L  +G   GI FQ ADD+LD  +D 
Sbjct: 182 TLERVHALKTGGLYAAAGALGGLSSPTAAPEAATQLERYGLAFGIAFQHADDVLD--DDQ 239

Query: 235 PK 236
           P 
Sbjct: 240 PS 241


>gi|8272410|dbj|BAA96457.1| farnesyl diphosphate synthase [Rhodobacter sphaeroides]
          Length = 256

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/198 (42%), Positives = 124/198 (62%), Gaps = 8/198 (4%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +RYA+ GGK++R FLV E A L  +    A+   A+IE +H YSL+HDD+P MD+  +RR
Sbjct: 1   MRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRR 60

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G PTVH ++DE TA++AG+ L T AFE+++ P       +R +L+ SL    G +GM+ G
Sbjct: 61  GLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAAVRIELVASLAKASGAEGMVLG 119

Query: 163 QMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           Q LDI  E     +   Q+  +Q  KTGAL+ ++ E+GAI+    Q ++  LR +   LG
Sbjct: 120 QALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAIL---GQADRVPLRRYATALG 176

Query: 219 IIFQLADDLLDCEEDLPK 236
           + FQ+ADD+LD E D  K
Sbjct: 177 LAFQIADDILDVEGDAEK 194


>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 307

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 7/198 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA L GGK++R  LV     L +          +A+E IH YSL+HDDLP MD
Sbjct: 44  RLHQAMRYASLDGGKRVRPLLVFAAGDLTDAARERLELAASAVELIHSYSLVHDDLPCMD 103

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIG 155
           +  +RRG+PT H++YDE TA++ G+ L + AFE+++  +    D  R   M+  L    G
Sbjct: 104 DDVLRRGRPTCHVEYDEATALLVGDSLQSLAFELLA--REDFGDGARQLEMVRLLARASG 161

Query: 156 LQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRC 212
             GM GGQ +D++   + +++ ++ ++  +KTGAL+  A   GA+     S  E+E L  
Sbjct: 162 SCGMAGGQSIDLESVGKTLNQPELELMHALKTGALIRAAVILGALCGTPLSTTEREALDR 221

Query: 213 FGENLGIIFQLADDLLDC 230
           F +  G++FQ+ DD+LDC
Sbjct: 222 FAKRAGLLFQVVDDILDC 239


>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
 gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
          Length = 308

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 8/207 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S +   + +++  A+RY+LL GGK++R  L      L       A+    A E  H  SL
Sbjct: 35  SAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCELLGGTVEMAMPTACAFEMSHTMSL 94

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP+MDN   RRGK T H  Y E  AI+AG+GLL YAFE I++    +      Q++
Sbjct: 95  IHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQVV 154

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM--CFACESGAIMAHA 202
             L   +G   ++GGQ++D++ E    + E  +  I   KTGAL+  C  C  GAI+A A
Sbjct: 155 ARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIHTHKTGALLEACVVC--GAILAGA 212

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229
              + +RL  + +N+G+ FQ+ DD+LD
Sbjct: 213 EPTDLQRLSRYAQNIGLAFQIVDDILD 239


>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
          Length = 373

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+  ++RY+LL GGK+IR  L      L   +  TA+    A+E IH  SL+HDDLP MD
Sbjct: 108 RIHESMRYSLLAGGKRIRPMLCIAACELVGGDEETAMPAACAVEMIHTMSLMHDDLPCMD 167

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  Y E  A++AG+ LL +AFE I++           +++  L  +IG 
Sbjct: 168 NDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIATATKGASSEKIVRVVGELAKSIGA 227

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E I       +  I   KT AL+  +   GAI+   ++ E  +LR F
Sbjct: 228 EGLVAGQVVDICSEGISNVGLEHLEFIHLHKTAALLEGSVVLGAILGGGTEEEIAKLRKF 287

Query: 214 GENLGIIFQLADDLLD 229
             N+G++FQ+ DD+LD
Sbjct: 288 ARNIGLLFQVVDDILD 303


>gi|114707337|ref|ZP_01440234.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Fulvimarina pelagi HTCC2506]
 gi|114537218|gb|EAU40345.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Fulvimarina pelagi HTCC2506]
          Length = 296

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 127/199 (63%), Gaps = 2/199 (1%)

Query: 37  DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RLL+A+R+  LGG K++R FL+ E A +F +     L +  A+E IHCYSL+HDDLP+M
Sbjct: 33  ERLLAAMRHGTLGGGKRLRPFLLIESARIFGIQDDAVLDIACALEAIHCYSLVHDDLPAM 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNI 154
           D+  +RRG+PTVH  YD+ TAI+AG+ LLT AF +++ + K   +  +R   +LS     
Sbjct: 93  DDDDLRRGRPTVHKAYDDATAILAGDSLLTLAFGLVAGASKIPPEARVRIAALLSADAGA 152

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G         L  +   + E ++  +Q MKTGAL+ FACE GAI A AS  ++ RLR FG
Sbjct: 153 GGMAGGQALDLAAEQSALSEDEIARMQAMKTGALIAFACEGGAIAAAASSEDQRRLRRFG 212

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G+ FQLADDLLD   D
Sbjct: 213 EIIGLAFQLADDLLDETAD 231


>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
 gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
          Length = 297

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 114/195 (58%), Gaps = 4/195 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           A+RY +L GGK++R  LV   A ++   +   ALR   ++E IH YSLIHDD+P MD+  
Sbjct: 36  AMRYGVLDGGKRLRPLLVLSAAEAVGATDSEAALRAACSVELIHAYSLIHDDMPCMDDDV 95

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKPTVH+++ +  A++AG+ +   AFE+++     +   ++++L   L    G  GM
Sbjct: 96  LRRGKPTVHVKFGQAQAMLAGDAMQALAFEVLTPEDDSVPLALQARLCGLLARAAGQDGM 155

Query: 160 LGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GGQ +D+      +DE  +  + + KTGAL+  +   GA    AS   ++ L  +G  L
Sbjct: 156 AGGQAIDLASIGRPLDEQSLSDMHRRKTGALLQASVMMGAACGDASPQARQALSEYGAAL 215

Query: 218 GIIFQLADDLLDCEE 232
           G+ FQ+ DD+LD  +
Sbjct: 216 GLAFQVVDDILDVTQ 230


>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
 gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
          Length = 296

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 137/224 (61%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF+I+ 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI+++A++ ++E+L  F +N+G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVE 229


>gi|325267227|ref|ZP_08133890.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
 gi|324981288|gb|EGC16937.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
          Length = 295

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 128/229 (55%), Gaps = 6/229 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           LQ   KR+    + +L Q    + +Q    L  A+RY AL GGK++R  LV   + L + 
Sbjct: 4   LQLWQKRVAAQTEIILQQKLPQI-SQEPVVLHEAMRYSALDGGKRLRPLLVWAASQLGDS 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+ECIH YSL+HDD+P MDN  +RRGKPT H+Q+ +  A++ G+ L T A
Sbjct: 63  VQAACEAAMAAVECIHVYSLVHDDMPEMDNDQLRRGKPTCHVQFGDAVALLTGDALQTLA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKT 185
           F+I+S+  T+L    + +++  L    G  GM GGQ +D+ +   D  Q  + Q   +KT
Sbjct: 123 FDILSA-ATELPAERQLKMVQVLAKASGSLGMAGGQAIDLANVGKDMKQPALEQMHGLKT 181

Query: 186 GALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  A + G +     + ++  RL  +   LG+ FQ+ DD+LDCE D
Sbjct: 182 GALIRAAVQLGGLSCPQITADQLARLDAYAAKLGLAFQVIDDVLDCEAD 230


>gi|37679053|ref|NP_933662.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
 gi|37197795|dbj|BAC93633.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
          Length = 298

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 130/241 (53%), Gaps = 28/241 (11%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L S  Q N+++++  LD L            N  L+ A+RY L LGGK+ R FLV     
Sbjct: 9   LASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVYATGE 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +        +AIECIH YSLIHDDLP+MD+  +RRG+PT H+++DE TAI+ G+ L
Sbjct: 60  MLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDAL 119

Query: 124 LTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
            T AF I++    SP  + +   R  ++ +L    G QGM  GQ LD+  ++  +   ++
Sbjct: 120 QTLAFTILAEGTLSPDGETQ---RVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEEL 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK-----ERLRCFGENLGIIFQLADDLLDCEE 232
             I + KTGAL+  A   GA+ A     EK      +L  F   +G+ FQ+ DD+LD   
Sbjct: 177 EEIHRNKTGALIRCAVRLGALAA----GEKGLAILPQLEKFSTAIGLAFQVQDDILDIIS 232

Query: 233 D 233
           D
Sbjct: 233 D 233


>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
 gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
 gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
 gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
 gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
 gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
          Length = 296

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 137/224 (61%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF+I+ 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI+++A++ ++E+L  F +N+G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVE 229


>gi|255262547|ref|ZP_05341889.1| geranyltranstransferase [Thalassiobium sp. R2A62]
 gi|255104882|gb|EET47556.1| geranyltranstransferase [Thalassiobium sp. R2A62]
          Length = 281

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 132/232 (56%), Gaps = 24/232 (10%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + + + RI+  +D +L           +D L+  + +AL GGK  R+FLV E + L  
Sbjct: 6   TAMADAASRIEARIDQVLTP---------DDPLIEPMGHALRGGKMFRAFLVLEGSRLHG 56

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V+   AL    AIECIH YSL+HDDLP MD+  +RRG+PTVH ++DE TA++ G+ L + 
Sbjct: 57  VDEAVALDAAMAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEATAVLVGDNLQSL 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQK 182
           AF++I+ P   L   I  +L       +  + M+ GQMLDI  E         Q+  +Q+
Sbjct: 117 AFQLITGPG--LGGAIAQRLA------VDARTMVKGQMLDIAAETAATPLTLDQIIELQQ 168

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            KTGAL+ +A  +G +MA A      R   + + LG+ FQ+ADDLLD E D+
Sbjct: 169 HKTGALIKWAAVAGPLMAGADIGPMSR---YADALGLAFQIADDLLDVEGDV 217


>gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 309

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 133/242 (54%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L S L+E    +++ LD       S +   +  ++  A+RY+LL GGK++R  L   
Sbjct: 16  NFSLASYLEEKRLIVESALD-------SSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLA 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   AL    A+E IH  SLIHDDLP+MDN   RRGK T H  + E  AI+AG
Sbjct: 69  TCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +GLL YAFE +++    +      +++  L   +G  G++GGQ+LD++ E    I    +
Sbjct: 129 DGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDL 234
             I   KTGAL+  +  SGA++A A   +  +L  + +N+G+ FQ+ DD+LD    +E+L
Sbjct: 189 GFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEEL 248

Query: 235 PK 236
            K
Sbjct: 249 GK 250


>gi|320540321|ref|ZP_08039973.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
 gi|320029641|gb|EFW11668.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
          Length = 306

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 13/201 (6%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSM 95
           L++++R+ ALLGGK++R FLV     +F +  N+L A    AA+ECIH YSLIHDDLP+M
Sbjct: 39  LVASMRHGALLGGKRLRPFLVYTTGQMFGIAQNNLDA--PAAAVECIHAYSLIHDDLPAM 96

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152
           DN  +RRG+PT HI++ E  AI+AG+ L + AF I++    P   L+D  R  ++  L  
Sbjct: 97  DNDDLRRGQPTCHIKFGEANAILAGDALQSLAFSILADAEMPDVALRD--RLAMVSELAA 154

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G+ GM GGQ +D+  E   I    +  I + KTGAL+  A   GA+ A +S       
Sbjct: 155 ASGVAGMCGGQSMDLDAEGKQIGLAALEQIHRHKTGALIRAAIRLGALAAGSSGRAALPL 214

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  +   +G+ FQ+ DD+LD 
Sbjct: 215 LDRYAAAIGLAFQVQDDILDV 235


>gi|301170227|emb|CBW29831.1| geranyltranstransferase [Haemophilus influenzae 10810]
          Length = 296

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 135/237 (56%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I +     Q  ++ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDQRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
 gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
          Length = 297

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 124/212 (58%), Gaps = 7/212 (3%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + + + + YA+L GGK++R FL+     L N +    ++   A+E IH YSL+HD
Sbjct: 25  ELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H  + E   I+ G+ LLTYAF ++S    +L  + +   ++S 
Sbjct: 85  DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNIISK 144

Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T    G+ GM+GGQM+DI+ E   ID   +  I   KTG L+  + E   I+A+  ++++
Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLSIEIACIIANVEKDKR 204

Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           E L  + + +G+ FQ+ DD+LD E   EDL K
Sbjct: 205 EVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236


>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 294

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 130/218 (59%), Gaps = 13/218 (5%)

Query: 31  MQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           ++ + N +++  A++Y++  GGK++R  L      LF  +   AL V  AIE IH YSLI
Sbjct: 21  LEVEENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDIKKALPVACAIELIHTYSLI 80

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRGKPT H  Y E  AI+AG+GLL  AFE++   +  L++    Q +L
Sbjct: 81  HDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLI--RHALENPHDYQRIL 138

Query: 149 SLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
             T  I    G +GM+GGQ++DI  Q+  +   ++  + + KTGAL+  +  +GA +A A
Sbjct: 139 KATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKTGALIEASVCAGAYIAGA 198

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
            + +   LR +   +G+ FQ+ DD+LD    EE L KK
Sbjct: 199 IEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKK 236


>gi|254439465|ref|ZP_05052959.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
 gi|198254911|gb|EDY79225.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
          Length = 299

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 117/196 (59%), Gaps = 9/196 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+ YA+ GGK +R FLV E A L  V    A  +  AIE +H YSLIHDDLP MD+  +R
Sbjct: 44  AMMYAVRGGKALRGFLVLEGARLHGVEERIAAPIAGAIEAMHAYSLIHDDLPCMDDDDVR 103

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGKPTVH ++D  TA++ G+ L   AFE+I S   + +  +    ML++  + G +GM+G
Sbjct: 104 RGKPTVHRKWDAATAVLTGDALQALAFELIMSADIKPEAKVVLAHMLAI--DAGERGMVG 161

Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ  DI  E  D      ++  +Q  KTGAL+ +AC +G  +A A +     +R +G+ L
Sbjct: 162 GQAADIAAETADAPLTLREIESLQAKKTGALIEWACAAGPRIAGADEMP---MRHYGQAL 218

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ADD+LD   D
Sbjct: 219 GRAFQIADDILDVTGD 234


>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
 gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 289

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 130/229 (56%), Gaps = 12/229 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L++ ++ +D+ L      T +         L  ++ Y+L  GGK+IR  L    A    
Sbjct: 5   ELEDYARLVDSYLAQFPWPTGT---------LAESMNYSLSAGGKRIRPVLALAAAHAVG 55

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    L    A+E IH YSLIHDDLP+MDN   RRG+   H  + E  AI+AG+ LLTY
Sbjct: 56  GDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDALLTY 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           AFE+I+ P + ++   + + +  +    G +GM+GGQMLD++ E   ++  ++  + ++K
Sbjct: 116 AFELIAQPMSGVEPQRQLRAIREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLK 175

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGA++  A   GAI+A  ++ + E L  + + +G+ FQ+ DD+LD E D
Sbjct: 176 TGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESD 224


>gi|332283715|ref|YP_004415626.1| geranyltranstransferase [Pusillimonas sp. T7-7]
 gi|330427668|gb|AEC19002.1| geranyltranstransferase [Pusillimonas sp. T7-7]
          Length = 304

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 134/239 (56%), Gaps = 17/239 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC-- 61
            P  L +  + I+ +LD +L Q     +T   + L  A+RYA+LGG K++R+ LV     
Sbjct: 8   FPIWLDDRVQHIEAVLDQVLPQ-----ETVVPESLHEAMRYAVLGGGKRVRAALVYAAGE 62

Query: 62  ASLFNVNHLTALRVG-----AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           A+L +    +A ++G     AA+E IH YSLIHDDLP MD+  +RRG+PTVH+++ E TA
Sbjct: 63  AALQSGTPASAQQIGLDHAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTVHVRFSEATA 122

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DE 174
           ++AG+ L   AFE++      +   +  Q    L  + G  GM+GGQ +D +   +   +
Sbjct: 123 MLAGDALQPLAFELLG--LMPIAPALIVQATQLLARSAGSLGMVGGQAIDCESVGVALSK 180

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            Q+  +  MKTGA++  +   G I+A A    ++ L  +   +G+ FQ+ DD+LD   D
Sbjct: 181 EQLQQMHSMKTGAMLEASVLLGGIVAGAGSAVRQGLEDYATAIGLAFQVVDDILDVTAD 239


>gi|261212060|ref|ZP_05926346.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC341]
 gi|260838668|gb|EEX65319.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC341]
          Length = 294

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 132/241 (54%), Gaps = 26/241 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  Q N++++D  L+ +  Q+           L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSYQQRNNQQLDLWLNRIPFQSLP---------LIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +    +N L      +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G
Sbjct: 55  QMLGCELNELDT--PASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTG 112

Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
           + L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  ++  +   ++
Sbjct: 113 DALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEEL 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLADDLLDCEE 232
             I + KTGALM  A   GA+ A     EK R     L  + + +G+ FQ+ DD+LD   
Sbjct: 173 ETIHRNKTGALMRCAIRLGALAA----GEKGRAMLPHLDRYADAVGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|186940997|dbj|BAG31127.1| geranyltranstransferase [Xanthomonas perforans 91-118]
          Length = 291

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 122/204 (59%), Gaps = 9/204 (4%)

Query: 33  TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T    RL +A+R+A+LGG K++R  LV    +LF            A+E IH YSL+HDD
Sbjct: 25  THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     +  +R   M SL 
Sbjct: 85  LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATASASAE--LRVSWMQSLA 142

Query: 152 HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              G  GM GGQ LDI    Q + + + Q   +  +KTGAL+  A   GA+   A+  ++
Sbjct: 143 TAAGAAGMCGGQALDIDATGQLQSLQDLQ--RMHALKTGALIRAAVRMGALTGCAAAADQ 200

Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
           +RL  F + LG+ FQ+ DD+LD E
Sbjct: 201 QRLDEFADALGLAFQVRDDILDVE 224


>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
          Length = 356

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 113/195 (57%), Gaps = 10/195 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L      TA+    A+E IH  SLIHDDLP MDN   
Sbjct: 94  AMRYSLLAGGKRVRPILCIAACELVGGEEATAMPAACAVEMIHTMSLIHDDLPCMDNDDF 153

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML-SLTHNIGLQGM 159
           RRGKPT H  Y E  A++AG+ LL +AFE +SS +T+     R    +  L  +IG +G+
Sbjct: 154 RRGKPTNHKVYGEDVAVLAGDSLLAFAFEYVSS-RTEGASPARVLAAIGELAKSIGTEGL 212

Query: 160 LGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           + GQ++DI     QD  +D+ +   I   KT AL+  +   GAI+   S  + E+LR F 
Sbjct: 213 VAGQVVDIASTGGQDIGLDQLEFIHIH--KTAALLEASVVLGAILGGGSDAQVEKLRTFA 270

Query: 215 ENLGIIFQLADDLLD 229
             +G++FQ+ DD+LD
Sbjct: 271 RCIGLLFQVVDDILD 285


>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
           [Deferribacter desulfuricans SSM1]
 gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
           [Deferribacter desulfuricans SSM1]
          Length = 300

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 137/235 (58%), Gaps = 14/235 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L + ++  ++R+D  + + L       + +    L+ ++RY++  GGK++R  L+  
Sbjct: 4   NFNLKNYIKFFAQRVDDWIRNYLT-----YENEQTIGLIESMRYSIFAGGKRLRPVLIYS 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F           AA+E +H YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG
Sbjct: 59  SYGIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDI--QDEFIDE 174
           + LLT AFEI+      +  +I ++ +L     L  + G +GM+GGQ  DI  +++ ID+
Sbjct: 119 DALLTLAFEIMLD--KDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDK 176

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +  I K KT AL+ + CE GAI+  A + +K+ L  FGE +G+ FQ+ DD+LD
Sbjct: 177 NTLDFIHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILD 231


>gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 297

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 121/203 (59%), Gaps = 6/203 (2%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+ YA LLGGK++R FL+     +  V         AA+E IH YSL+HDDLP+MD+
Sbjct: 34  LVEAMAYAVLLGGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDD 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT HI +DE TAI+AG+ L ++AFE++++    L D  +   +  L    G +
Sbjct: 94  DRLRRGKPTCHIAFDEATAILAGDALQSFAFELLAT-DPHLTDREKVAQVTELATASGAK 152

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCF 213
           GM  GQ LD+  +++ +   ++ +I + KTGAL+  +   G  ++  SQN   K+ L  +
Sbjct: 153 GMCLGQSLDLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEHSQNLAIKQPLVNY 212

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
            + +G+ FQ+ DD+LD   D  K
Sbjct: 213 AKAIGLAFQVQDDILDVIGDTDK 235


>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
          Length = 288

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 117/196 (59%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY++L GGK++R  L      L      TA+    A+E IH  SL+HDDLP MD
Sbjct: 23  KIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAACAVEMIHTMSLMHDDLPCMD 82

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H+ + E  A++AG+ LL +AFE+I++  T +  +   +++  L  +IG 
Sbjct: 83  NDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVPADRIVRVIGELAKSIGS 142

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + +     +  I   KT AL+  +   GAI+  A+  E E+LR F
Sbjct: 143 EGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGATDPEVEKLRKF 202

Query: 214 GENLGIIFQLADDLLD 229
              +G +FQ+ DD+LD
Sbjct: 203 ARCIGFLFQVVDDILD 218


>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
 gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
          Length = 296

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 4/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  L         V         +A+E IH YSL+HDDLPSMD
Sbjct: 32  RLHEAMRYAVLGGGKRLRPLLTYSAGMAVGVAEAALDAPASAVELIHAYSLVHDDLPSMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT H  + E TA++AG+ L   AF I++ P + +    +  ++  L    G 
Sbjct: 92  NDDLRRGQPTCHKAFGETTALLAGDALQALAFRILAEPASTIPAENQINMLKLLAEAAGS 151

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
           +GM GGQ +D+    I  T  ++  + ++KTGAL+  +   GA    A +Q+  E+L  F
Sbjct: 152 RGMAGGQAIDLDSVGIQLTLSEMETMHRLKTGALIRASVLLGAWCQPAITQDTIEKLDHF 211

Query: 214 GENLGIIFQLADDLLDCEED 233
            + +G+ FQ+ DD+LD E D
Sbjct: 212 AQCIGLAFQIQDDVLDVESD 231


>gi|16273345|ref|NP_439590.1| geranyltranstransferase [Haemophilus influenzae Rd KW20]
 gi|1170589|sp|P45204|ISPA_HAEIN RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|1574277|gb|AAC23087.1| geranyltranstransferase (ispA) [Haemophilus influenzae Rd KW20]
          Length = 295

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISTEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|260580726|ref|ZP_05848552.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           RdAW]
 gi|260092543|gb|EEW76480.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           RdAW]
          Length = 296

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISTEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|197334446|ref|YP_002155475.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
           fischeri MJ11]
 gi|197315936|gb|ACH65383.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
           fischeri MJ11]
          Length = 298

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 120/202 (59%), Gaps = 9/202 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++Y+LL GGK+ R +LV   A +  +    A    AAIEC+H YSLIHDDLP+MDN
Sbjct: 34  LTEAMKYSLLLGGKRARPYLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDN 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNI 154
             +RRG  T HI+YDE TAI+AG+ L T AFEI+++   QL D+    R  ++  L+   
Sbjct: 94  DDLRRGHATCHIKYDEATAILAGDALQTLAFEILAN--GQLSDDAETSRIDMIRVLSKAS 151

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211
           G  GM  GQ LD+Q E   +D T +  I   KTGAL+  A + GA+ A    +    +L 
Sbjct: 152 GASGMCMGQSLDLQAEGKKVDLTSLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLE 211

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + + +G+ FQ+ DD+LD   D
Sbjct: 212 VYADAIGLAFQVQDDILDIISD 233


>gi|240113852|ref|ZP_04728342.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
 gi|240126561|ref|ZP_04739447.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
 gi|254494609|ref|ZP_05107780.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
 gi|268599920|ref|ZP_06134087.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
 gi|268685141|ref|ZP_06152003.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
 gi|226513649|gb|EEH62994.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
 gi|268584051|gb|EEZ48727.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
 gi|268625425|gb|EEZ57825.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
          Length = 298

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L         +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKTGGSAGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +  +  +  +KTGAL+  A   GA      S  E   L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
 gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
          Length = 287

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 4/202 (1%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +N  L  +++Y++ +GGK+IR  L+    S++  N+   + +  AIE IH YSLIHD
Sbjct: 19  KGSYNKILYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIMPMACAIEMIHTYSLIHD 78

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP MDN  +RRGKPT H  + E  AI+AG+GLL  A  I+ +  +   D +       +
Sbjct: 79  DLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIMFNY-SLTHDKLALMASKVI 137

Query: 151 THNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           +   G +GM+GGQ++DI  + + I   ++  + K KTG L+  +  +GAI+  AS+ E E
Sbjct: 138 SEASGAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKSSIIAGAILGGASKEEIE 197

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
            L  FG  LG+ FQ+ DD+LD 
Sbjct: 198 ILDEFGSKLGLAFQIKDDILDV 219


>gi|206576602|ref|YP_002240111.1| geranyltranstransferase [Klebsiella pneumoniae 342]
 gi|288936860|ref|YP_003440919.1| polyprenyl synthetase [Klebsiella variicola At-22]
 gi|290510084|ref|ZP_06549454.1| geranyltranstransferase [Klebsiella sp. 1_1_55]
 gi|206565660|gb|ACI07436.1| geranyltranstransferase [Klebsiella pneumoniae 342]
 gi|288891569|gb|ADC59887.1| Polyprenyl synthetase [Klebsiella variicola At-22]
 gi|289776800|gb|EFD84798.1| geranyltranstransferase [Klebsiella sp. 1_1_55]
          Length = 299

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 124/211 (58%), Gaps = 13/211 (6%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   N  L+ A+ Y ALLGGK++R FLV    ++F V+  T     AA+ECIH YSL+HD
Sbjct: 25  QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGAMFGVSRTTLDAPAAAVECIHAYSLMHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MD+  +RRG PT HI++ E  AI+AG+ L T AF I+S +P   + D  R  ++  
Sbjct: 85  DLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMADVSDRDRLAMVSE 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+ GM GGQ LD++ E   +D   +  I + KTGAL+  A   GA+    S  E+
Sbjct: 145 LAQASGVAGMCGGQALDLEAEGQQVDLQALERIHRHKTGALIRAAVRMGAL----SAGER 200

Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233
            R     L  + EN+G+ FQ+ DD+LD   D
Sbjct: 201 GRAALPALDRYAENIGLAFQVQDDILDVVGD 231


>gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 297

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 9/211 (4%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           LQ  S+ +T     +   + YA+L GGK++R FL+     L N N    ++   A+E IH
Sbjct: 23  LQELSYPET-----IAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIH 77

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP++DN   RRGK T H  + E   I+ G+ LLTYAF I+S    +   + +
Sbjct: 78  SYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYILSQKNLKFLSSEQ 137

Query: 144 SQLMLSLTHNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA 200
              ++S T    G+ GM+GGQM+DI+ E   ID   +  I   KTG L+    E   I+A
Sbjct: 138 IVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLPIEIACIIA 197

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +  +++KE L  +   +G+ FQ+ DD+LD E
Sbjct: 198 NVEKDKKEVLEEYANLIGLAFQVKDDILDVE 228


>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
 gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
          Length = 300

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S +  +  + L  A+RY+LL GGK++R  L      L   +   AL    A+E IH  SL
Sbjct: 28  SSLGPERPESLREAMRYSLLAGGKRLRPILCLASCELAGGDASLALPTATALEMIHTMSL 87

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQ 145
           IHDDLP+MDN  +RRG+PT H  Y + TAI+AG+ LLT AFE+++  SP    +  ++  
Sbjct: 88  IHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGDALLTRAFEMVALRSPDVPAERLLKVI 147

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
             LSL    G  G++GGQ++D+  E   +D   +  I   KTGAL+  +  SGA++A A 
Sbjct: 148 GELSLA--AGAPGLVGGQIVDLASEGVEVDLDTLEYIHLHKTGALLQASVLSGALIAGAD 205

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
               E LR +   +G+ FQ+ DD+LD 
Sbjct: 206 DTLLEALRTYSRAIGLAFQIIDDILDV 232


>gi|257467862|ref|ZP_05631958.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317062151|ref|ZP_07926636.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|313687827|gb|EFS24662.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
          Length = 295

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 9/229 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L  N K I++ +D  L       +  + + +   ++YA+L GGK++R  L+     +   
Sbjct: 7   LDSNKKLIESSMDTYL------SELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILGC 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +   AAIE IH YSL+HDDLP++DN   RRGK T H ++ E   I+ G+ LLT+A
Sbjct: 61  EKENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F I++     L      +++   +   G+ GM+GGQM+DI  E   ID   +  I   KT
Sbjct: 121 FYILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIHSNKT 180

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           G LM    E   I+  A + EKE L  F + +G+ FQ+ DD+LD E D 
Sbjct: 181 GKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDF 229


>gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
 gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
 gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
 gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
          Length = 296

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NALLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|260583060|ref|ZP_05850842.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           NT127]
 gi|260093911|gb|EEW77817.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           NT127]
          Length = 296

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GNFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|261341013|ref|ZP_05968871.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
 gi|288316878|gb|EFC55816.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
          Length = 299

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 126/208 (60%), Gaps = 7/208 (3%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   N  L+ A+ Y ALLGGK++R FLV    ++F ++  T     AA+ECIH YSLIHD
Sbjct: 25  QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDATLDAPAAAVECIHAYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MD+  +RRG+PT HI++ E  AI+AG+ L T AF I+S +P  ++ D  R  ++  
Sbjct: 85  DLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMVEVSDRYRLAMVSE 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+ GM GGQ LD++ E   ++  Q+  I + KTGAL+  A   GA+ A   Q  K
Sbjct: 145 LAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGALSA-GEQGRK 203

Query: 208 ER--LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPILDRYAESIGLAFQVQDDILDVVGD 231


>gi|254458755|ref|ZP_05072179.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales
           bacterium GD 1]
 gi|207084521|gb|EDZ61809.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales
           bacterium GD 1]
          Length = 282

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 114/187 (60%), Gaps = 6/187 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L+    + +N   L   R  A A+E +H YSLIHDDLP+MD+  +RRG+PT+
Sbjct: 33  GGKRFRPALLLGVVAAYNSLMLDGARHAAYAVELLHTYSLIHDDLPAMDDSPLRRGEPTL 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H+ YDEVTAI+ G+ L TY+FE++S+      D  R +L+  L  N GL GM+ GQ +D 
Sbjct: 93  HVLYDEVTAILVGDALNTYSFEVLSN--APFSDYTRVKLIQELAKNGGLNGMVLGQAIDC 150

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +++ ++   + ++   KT  L+  + + GAI+    +   ++L  FG  LG++FQ+ D
Sbjct: 151 YFENKPLNVADIKILHTNKTAKLIAASLKMGAIIV-GQEELGDKLYAFGIKLGLLFQIQD 209

Query: 226 DLLDCEE 232
           D+LD  +
Sbjct: 210 DILDVTQ 216


>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
          Length = 370

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 123/228 (53%), Gaps = 11/228 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S + E + R++  LDD        +  +   ++  A+RY+LL GGK++R  L      L 
Sbjct: 81  SYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELV 133

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL 
Sbjct: 134 GGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLA 193

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQK 182
           +AFE I+     +      + +  L  +IG +G++ GQ++DI  E + +    Q+  I  
Sbjct: 194 FAFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLEFIHL 253

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            KT AL+  A   GAI+   S  + E+LR F   +G++FQ+ DD+LD 
Sbjct: 254 HKTAALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDV 301


>gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           R3021]
 gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           R3021]
          Length = 296

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
          Length = 386

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 5/207 (2%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +  ++  ++  ++RY+LL GGK++R  L      L       A+    AIE IH  SLIH
Sbjct: 113 IPPRYPQKIYESMRYSLLAGGKRVRPILCIAACELMGGTEELAMPTACAIEMIHTMSLIH 172

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLML 148
           DDLP +DN  +RRGKPT H  + E TAIIAG+ LL+ AFE ++ S    L  +I  +L+ 
Sbjct: 173 DDLPYIDNDDLRRGKPTNHKVFGEDTAIIAGDALLSLAFEHVAVSTSRTLGTDIILRLLS 232

Query: 149 SLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            +    G +G++GGQ++DI+   D  ID   +  +   KT  L+  +   GAIM  AS++
Sbjct: 233 EIGRATGSEGVMGGQVVDIESEGDPSIDLETLEWVHIHKTAVLLECSVVCGAIMGGASED 292

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
           + ER R +   +G++FQ+ DD+LD  +
Sbjct: 293 DIERARRYARCVGLLFQVVDDILDVSQ 319


>gi|329123445|ref|ZP_08252009.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
 gi|327471027|gb|EGF16482.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
          Length = 296

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 133/240 (55%), Gaps = 19/240 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A+ YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMEYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQDEF--IDET 175
            L ++AFEI++        NI S+  L+    L    G QGM  GQ LD+  E   I   
Sbjct: 117 ALQSFAFEILTKTP-----NISSEQKLALIKILAQGAGAQGMCLGQSLDLISEHKQISLN 171

Query: 176 QVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++ +I + KTGAL+  A + G I +   A +  ++ L  + E +G+ FQ+ DD+LD E D
Sbjct: 172 ELELIHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
 gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
 gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
 gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
          Length = 393

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 121/201 (60%), Gaps = 5/201 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ +++  ++RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDL
Sbjct: 123 EYPEKIHESMRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDL 182

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LT 151
           P MDN   RRGKPT H  + E TA++AG+ LL++AFE I+   ++   + R+  ++S L 
Sbjct: 183 PCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELG 242

Query: 152 HNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             IG QG++GGQ++DI    D  +D   +  I   KT  L+  +  SG I+  A+++E  
Sbjct: 243 KTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVSGGILGGATEDEIA 302

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           R+R +   +G++FQ+ DD+LD
Sbjct: 303 RIRRYARCVGLLFQVVDDILD 323


>gi|303239901|ref|ZP_07326424.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2]
 gi|302592611|gb|EFL62336.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2]
          Length = 297

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 133/243 (54%), Gaps = 20/243 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRL----LSAIRYALL-GGKKIRSFLVTECAS 63
            +EN +R   +++  L         + ND L     SA+RY+LL GGK++R  L      
Sbjct: 3   FKENQQRYADLVNAFL-----DNYVKENDLLEKSVYSAMRYSLLAGGKRLRPVLALAVCE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +    +    AIE +H YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+GL
Sbjct: 58  LLGGDINEVMPFACAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILAGDGL 117

Query: 124 LTYAFEI-ISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQV 177
           L  AFE+ I S  T   +N   + + M  +  + G+ GM+ GQ++D + E  +   ET  
Sbjct: 118 LNLAFELMIESTATDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAYETLE 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
           +M  K KTGAL+     S AI+ +AS+ +   L  +  NLG+ FQ+ DD+LD E   E L
Sbjct: 178 YM-HKCKTGALIKAPVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGSTEKL 236

Query: 235 PKK 237
            KK
Sbjct: 237 GKK 239


>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
          Length = 383

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 7/202 (3%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ +++  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDL
Sbjct: 113 RYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDL 172

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSL 150
           P MDN  +RRGKPT H  + E TA++AG+ LL++AFE   +S+ KT   D +  +++  L
Sbjct: 173 PPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKTVESDRVL-RVVSEL 231

Query: 151 THNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              IG +G+ GGQ+ DI  +    +    +  I   KT  L+  +  SGAI+  AS +E 
Sbjct: 232 GRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHKTAVLLECSVASGAIIGGASDDEI 291

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           ER+R +   +G++FQ+ DD+LD
Sbjct: 292 ERVRKYARCVGLLFQVVDDILD 313


>gi|260776529|ref|ZP_05885424.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607752|gb|EEX34017.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 294

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 130/241 (53%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L S  Q N+++++  L+ L               L+ A+RY LL GGK+ R FLV 
Sbjct: 1   MHEALTSLQQRNNRQLERWLNQL---------PHQEQPLIEAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKLEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FID 173
           G+ L T AF I++    SP+ +     R +++ +L    G  GM  GQ LD+  E   + 
Sbjct: 112 GDALQTLAFTILADGELSPEAE---TYRIKMVKALAEASGANGMCLGQALDLSAEGQKVS 168

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEE 232
             ++  I + KTGALM  A   GA+ A    +E   +L  F + +G+ FQ+ DD+LD   
Sbjct: 169 LAELENIHRNKTGALMKCAIRLGALAAGQKGSEILPQLDQFADAIGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|116331899|ref|YP_801617.1| geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116125588|gb|ABJ76859.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 313

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 14/220 (6%)

Query: 26  QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           QT S +  Q    L  A++Y+L+ GGK++R  LV              L +G+++ECIH 
Sbjct: 24  QTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGSSLECIHT 83

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLPSMDN   RRG PT+H ++ E TAI+ G+ L ++AF  IS  +   +D    
Sbjct: 84  YSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGDNEDYFLH 143

Query: 145 QLMLSLTHN-IGLQGMLGGQMLDIQDEF---------IDETQVFMIQ---KMKTGALMCF 191
           + +L + H   G  GM+ GQ+ D+Q E           ++ +V M+Q   ++KTGAL+  
Sbjct: 144 RDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLKTGALIKA 203

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   G  +    +  +  L  +GE+LG++FQ+ DD+LD E
Sbjct: 204 ALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDILDVE 243


>gi|116327487|ref|YP_797207.1| geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120231|gb|ABJ78274.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 313

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 14/220 (6%)

Query: 26  QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           QT S +  Q    L  A++Y+L+ GGK++R  LV              L +G+++ECIH 
Sbjct: 24  QTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGSSLECIHT 83

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLPSMDN   RRG PT+H ++ E TAI+ G+ L ++AF  IS  +   +D    
Sbjct: 84  YSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGDNEDYFLH 143

Query: 145 QLMLSLTHN-IGLQGMLGGQMLDIQDEF---------IDETQVFMIQ---KMKTGALMCF 191
           + +L + H   G  GM+ GQ+ D+Q E           ++ +V M+Q   ++KTGAL+  
Sbjct: 144 RDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLKTGALIKA 203

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   G  +    +  +  L  +GE+LG++FQ+ DD+LD E
Sbjct: 204 ALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDILDVE 243


>gi|91793921|ref|YP_563572.1| polyprenyl synthetase [Shewanella denitrificans OS217]
 gi|91715923|gb|ABE55849.1| farnesyl-diphosphate synthase [Shewanella denitrificans OS217]
          Length = 293

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 111/187 (59%), Gaps = 2/187 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           AL+GGK+IR FLV     +  V         AAIECIH YSLIHDDLP+MD+  +RRGKP
Sbjct: 39  ALMGGKRIRPFLVYAIGQMLKVPLEKLDNAAAAIECIHAYSLIHDDLPAMDDDDLRRGKP 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVHI ++E  AI+AG+ L + AFE+++  +       +  ++  L    G QGM GGQ +
Sbjct: 99  TVHIAFNEAQAILAGDALQSLAFELMTESQADTSPTQQLHMVKVLAKAAGYQGMCGGQAI 158

Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D+   ++ ID  Q+  +   KTGAL+  A E   I+A AS  E+  L  F   LG+ FQ+
Sbjct: 159 DLAATNKAIDLAQLTQLHNKKTGALISCAVELAIILADASPVERAHLAQFSHALGLAFQV 218

Query: 224 ADDLLDC 230
            DD+LD 
Sbjct: 219 QDDILDV 225


>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
          Length = 383

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 7/202 (3%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ +++  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDL
Sbjct: 113 RYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDL 172

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSL 150
           P MDN  +RRGKPT H  + E TA++AG+ LL++AFE   +S+ KT   D +  +++  L
Sbjct: 173 PPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKTVESDRVL-RVVSEL 231

Query: 151 THNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              IG +G+ GGQ+ DI  +    +    +  I   KT  L+  +  SGAI+  AS +E 
Sbjct: 232 GRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHKTAVLLECSVASGAIIGGASDDEI 291

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           ER+R +   +G++FQ+ DD+LD
Sbjct: 292 ERVRKYARCVGLLFQVVDDILD 313


>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
          Length = 345

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 114/195 (58%), Gaps = 3/195 (1%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK++R  L      L   + ++A+    A+E IH  SL+HDDLP MD
Sbjct: 81  KIHESMRYSLLAGGKRVRPILCLASCELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMD 140

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT HI Y E  A++AG+ LL++AFE +++    +      + +  L   IG 
Sbjct: 141 NDDFRRGKPTNHIVYGEEIAVLAGDALLSFAFEHVATATKDVSAERIVRAIGELAKCIGS 200

Query: 157 QGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++DI  E  D     +  I   KT AL+  +   GAIM   S  E ERLR F 
Sbjct: 201 EGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFV 260

Query: 215 ENLGIIFQLADDLLD 229
            ++G++FQ+ DD+LD
Sbjct: 261 RSIGLLFQVVDDILD 275


>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 300

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 125/227 (55%), Gaps = 14/227 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L +   R++  LD       + +  +   +L  A+RY+LL GGK++R  L      L   
Sbjct: 15  LAKEKIRVEAALD-------ASLGPERPKQLREAMRYSLLAGGKRLRPILCLAACELIAG 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              TAL    AIE IH  SLIHDDLPSMDN  +RRG+PT H  Y +  AI+AG+ LLT A
Sbjct: 68  ESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAGDALLTRA 127

Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           FE++S  SP    +  I+    LSL    G  G++GGQ+ D++ E   +D   +  I   
Sbjct: 128 FEMVSLRSPGISAERLIKVVGELSLVA--GAPGLVGGQVADLECEGKDVDIDTLEYIHIH 185

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTGAL+  +   GA++  A  +  + LR + E +G+ FQ+ DD+LD 
Sbjct: 186 KTGALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDV 232


>gi|148359869|ref|YP_001251076.1| geranyltranstransferase [Legionella pneumophila str. Corby]
 gi|296107919|ref|YP_003619620.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy]
 gi|148281642|gb|ABQ55730.1| geranyltranstransferase [Legionella pneumophila str. Corby]
 gi|295649821|gb|ADG25668.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy]
          Length = 298

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 24/207 (11%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++ SA+ YAL  GGK+IR  LV     L +V+      + AA+E  HCYSLIHDDLP+MD
Sbjct: 30  KIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154
           N  +RRGKP+ H  +DE TAI+ G+G+   A E++    T+L   + +  ++++T  +  
Sbjct: 90  NDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVV---LTRLSPLLPAAQVVAITQVLVN 146

Query: 155 --GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM--CFACESGAIMAHASQNE- 206
             G+ GM+ GQ LD+ +     + E Q+  I  +KTG L+  CF       M  A+QNE 
Sbjct: 147 ASGISGMVSGQSLDLSELAKLSVTEEQLREIHLLKTGKLILACFE------MVLAAQNEI 200

Query: 207 ----KERLRCFGENLGIIFQLADDLLD 229
               K  LR +G+++G++FQ+ DD LD
Sbjct: 201 SEQIKSALRTYGKHIGLVFQMQDDYLD 227


>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
 gi|156866965|gb|EDO60337.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
          Length = 293

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 5/200 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++ A+ Y+LL GGK+IR  L  E   +   +   A+    A+E IH YSLIHDDLP MDN
Sbjct: 29  VIEAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAAMPFACAVEMIHSYSLIHDDLPCMDN 88

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIR-SQLMLSLTHNIG 155
             +RRG+P  HIQY E  A++AG+GLLT AFE   SP++ +L    R ++    L    G
Sbjct: 89  SDLRRGRPANHIQYGEDIALLAGDGLLTLAFETALSPESIKLAGAQRGAEAARLLAKAAG 148

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +GM+GGQ++D+Q E        +++  + KTGAL+  A + G  +A A Q ++E    +
Sbjct: 149 AEGMVGGQVIDLQHENQRAPIEVLLEMDRKKTGALIQAAAQMGCAVAGADQKQREAAVEY 208

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 209 AACVGLAFQIRDDILDVISD 228


>gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
 gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
          Length = 297

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 119/197 (60%), Gaps = 6/197 (3%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+ YA LLGGK++R FL+     +  V         AA+E IH YSL+HDDLP+MD+
Sbjct: 34  LVEAMAYAVLLGGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDD 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT HI +DE TAI+AG+ L ++AFE++++    L D  +   +  L    G +
Sbjct: 94  DRLRRGKPTCHIAFDEATAILAGDALQSFAFELLAT-DPHLTDREKVVQVTELATASGAK 152

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KERLRCF 213
           GM  GQ LD+  +++ +   ++ +I + KTGAL+  +   G  ++  SQN   K+ L  +
Sbjct: 153 GMCLGQSLDLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNY 212

Query: 214 GENLGIIFQLADDLLDC 230
            + +G+ FQ+ DD+LD 
Sbjct: 213 AKAIGLAFQVQDDILDV 229


>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
 gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
 gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
          Length = 391

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           + T + +++  ++RY+LL GGK++R  L      L       A+    A+E IH  +LIH
Sbjct: 118 VPTHYPEKIHESMRYSLLAGGKRVRPTLCIAACELVGGTEDLAMPAACAMEMIHTMTLIH 177

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148
           DDLP MDN  +RRGKPT H  + E TA++AG+ LL++AFE I+   ++  ++ R  +++ 
Sbjct: 178 DDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGDALLSFAFEHIARSTSKTVESERVLRVIC 237

Query: 149 SLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L  ++G +G++ GQ++DI    D  +D   +  I   KT  L+  +  SGAI+  AS+ 
Sbjct: 238 ELGKSMGSEGLVAGQIVDIASEGDTSVDLKTLEYIHLHKTAVLLECSVVSGAIIGGASEE 297

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
           E ER R +   +G++FQ+ DD+LD
Sbjct: 298 EIERTRRYARCVGLLFQVVDDILD 321


>gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM
           17629]
 gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1]
          Length = 307

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 12/230 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +LQ+  + I+ +L+  L       +      +  A+ Y++  GGK++R  L+ E   +F 
Sbjct: 15  ELQQKVEHINDVLEKFLPAEEGQQRI-----IFEAMNYSVRAGGKRLRPILMEETYHMFG 69

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +        AAIE IH YSL+HDDLP+MDN   RRGK T H  Y E   I+AG+ LL  
Sbjct: 70  GSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNL 129

Query: 127 AFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-----MI 180
           A+E  +     ++ D   ++    L    G+ GM+GGQ++D++ E  D+  +       I
Sbjct: 130 AYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDFI 189

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ++KTGAL+  +   GAI+A AS +E  R+      LG+ FQ+ DD+LD 
Sbjct: 190 YRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDV 239


>gi|224476632|ref|YP_002634238.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222421239|emb|CAL28053.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 292

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 8/219 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVG 76
           +++LLLQ+        N  L  ++RY+L  GGK+IR  L+ E   +   N ++   L+  
Sbjct: 9   INELLLQSIPLSPLDTN--LEESMRYSLEAGGKRIRPLLLIETLKMLSNNSDYSKGLQTA 66

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E +H YSLIHDDLP+MDN   RRGK T H  Y E  A++AG+ LLT AF +IS+  +
Sbjct: 67  LALEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKALLAGDALLTKAFHLIST-DS 125

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L    R +L+  L+   G  GM+GGQ LD++ E   I    +  I K KTGAL+ +A  
Sbjct: 126 LLDAEARIKLVEGLSDASGHLGMIGGQTLDMESENKQIPLETLQQIHKEKTGALLTYAIM 185

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   +        + L  + E+LG+IFQ+ DDLLD   D
Sbjct: 186 AAVTIVKPPNEISDILNNYSEHLGLIFQIKDDLLDVYGD 224


>gi|148825981|ref|YP_001290734.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittEE]
 gi|229846704|ref|ZP_04466811.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           7P49H1]
 gi|148716141|gb|ABQ98351.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittEE]
 gi|229810193|gb|EEP45912.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           7P49H1]
          Length = 296

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GNFSEELQQVQIRINRFLEAQFDGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|269214464|ref|ZP_06158593.1| geranyltranstransferase [Neisseria lactamica ATCC 23970]
 gi|269209749|gb|EEZ76204.1| geranyltranstransferase [Neisseria lactamica ATCC 23970]
          Length = 292

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 117/196 (59%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   + L         +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 33  AMRYAVLDGGKRLRPMLVLAASELGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 92

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H++Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G +GM 
Sbjct: 93  RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMA 151

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +    + +  +  +  +KTGAL+  A   G++   + S++    L  +   L
Sbjct: 152 GGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGSMSCPNLSEDSLAILDDYAAKL 211

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 212 GLAFQVIDDVLDCEAD 227


>gi|259909275|ref|YP_002649631.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
 gi|224964897|emb|CAX56420.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
 gi|283479330|emb|CAY75246.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163]
          Length = 299

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 116/204 (56%), Gaps = 13/204 (6%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+ Y ALLGGK++R FLV     +   N        AAIECIH YSLIHDDLP+MDN
Sbjct: 32  LVNAMEYGALLGGKRLRPFLVYATGDMLRANDAALDAPAAAIECIHAYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  AI+AG+ L T AF I++ +P   +    R  ++  L    G+
Sbjct: 92  DSLRRGQPTCHIKFGEEAAILAGDALQTLAFSILADAPMPGVVAESRIAMLSELAQASGV 151

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM GGQ LD+  E    T  ++  I + KTGAL+  A   GA+ A     E+ R     
Sbjct: 152 AGMCGGQALDLAAEGKQVTLNELEQIHRHKTGALIRSAVRLGALTA----GERGRAALPA 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  F   +G+ FQ+ DD+LD   D
Sbjct: 208 LDRFANAIGLAFQVQDDILDVTGD 231


>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
 gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
 gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
 gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
 gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
 gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
          Length = 291

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 10/217 (4%)

Query: 19  ILDDLLLQTASHMQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RV 75
           ++DD L   A+H+    +  LL  ++ Y+LL GGK++R  L    A L        L R 
Sbjct: 11  VVDDYL---ATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRA 67

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E IH YSLIHDDLP+MDN  +RRGKPT H  Y    A +AG+GLLT AFE +S   
Sbjct: 68  ACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSD-- 125

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFAC 193
            QLK  +R +L+  L    G  GM+ GQ  D+    + +   Q+  + + KTGAL+ +A 
Sbjct: 126 NQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAV 185

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +G ++A       + L  FGE  G+ FQ+ DD+LD 
Sbjct: 186 LAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDV 222


>gi|319897071|ref|YP_004135266.1| geranyltranstransferase [Haemophilus influenzae F3031]
 gi|317432575|emb|CBY80935.1| geranyltranstransferase [Haemophilus influenzae F3031]
          Length = 296

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
 gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
          Length = 307

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 124/230 (53%), Gaps = 12/230 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +LQ+  + I+ +L+  L      ++      +  A+ Y++  GGK++R  L+ E   +F 
Sbjct: 15  ELQQKVEHINNVLEKFL-----PVEEGQQRIIFEAMNYSVRAGGKRLRPILMEETYHMFG 69

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +        AAIE IH YSL+HDDLP+MDN   RRGK T H  Y E   I+AG+ LL  
Sbjct: 70  GSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNL 129

Query: 127 AFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-----MI 180
           A+E  +     ++ D   ++    L    G+ GM+GGQ++D++ E  D+  +       I
Sbjct: 130 AYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDFI 189

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ++KTGAL+  +   GAI+A AS +E  R+      LG+ FQ+ DD+LD 
Sbjct: 190 YRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDV 239


>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
 gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
          Length = 296

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           L    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  LGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio vulnificus MO6-24/O]
 gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase [Vibrio
           vulnificus MO6-24/O]
          Length = 294

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 130/241 (53%), Gaps = 28/241 (11%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L S  Q N+++++  LD L            N  L+ A+RY L LGGK+ R FLV     
Sbjct: 5   LASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVYATGE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +        +AIECIH YSLIHDDLP+MD+  +RRG+PT H+++DE TAI+ G+ L
Sbjct: 56  MLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDAL 115

Query: 124 LTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
            T AF I++    SP  + +   R  ++ +L    G QGM  GQ LD+  ++  +   ++
Sbjct: 116 QTLAFTILAEGTLSPDGETQ---RVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEEL 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK-----ERLRCFGENLGIIFQLADDLLDCEE 232
             I + KTGAL+  A   GA+ A     EK      +L  +   +G+ FQ+ DD+LD   
Sbjct: 173 EEIHRNKTGALIRCAVRLGALAA----GEKGLAILPQLEKYSTAIGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|260424661|ref|ZP_05778957.1| geranyltranstransferase [Dialister invisus DSM 15470]
 gi|260402735|gb|EEW96282.1| geranyltranstransferase [Dialister invisus DSM 15470]
          Length = 287

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 123/201 (61%), Gaps = 12/201 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +D L ++++Y+L+ GGK+IR  L      +  V+    + V  A+EC+H YSLIHDDLP 
Sbjct: 23  HDSLYASMQYSLMAGGKRIRPCLFLVLLDILGVDSNLYINVACALECVHTYSLIHDDLPG 82

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI----RSQLMLSL 150
           MDN   RRGK   H +Y    A +AG+GLLTYAFE+++      ++NI    R  L+  L
Sbjct: 83  MDNDDYRRGKLANHKKYGVGIATMAGDGLLTYAFELLAC-----ENNISFFKRIALIKIL 137

Query: 151 THNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           T   G  GM+GGQ  D   + + +  +++  + + KTG L+C + +  + +A  S+N+KE
Sbjct: 138 TAAAGPAGMVGGQAHDKGAEGKTLSLSELMFLDQCKTGKLICASLDMASEIAGLSKNDKE 197

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            +  +G+++G++FQ+ DDLLD
Sbjct: 198 AIHTYGKHIGLLFQITDDLLD 218


>gi|238898686|ref|YP_002924367.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466445|gb|ACQ68219.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 312

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 130/230 (56%), Gaps = 16/230 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           +L +  KR++T L   L +  ++     N  LL  +RY+ L+GGK++R +LV     +  
Sbjct: 19  QLSKYQKRVETYLSSALDKLPAY-----NTVLLDVMRYSTLMGGKRLRPYLVYATGQMLG 73

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++        AAIECIH YSL+HDDLPSMDN  +RRG+ T H+++ E  AI+AG+ L + 
Sbjct: 74  LSLSNLDAPAAAIECIHSYSLLHDDLPSMDNDDLRRGELTGHVKFGEANAILAGDSLQSL 133

Query: 127 AFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMI 180
           AF I++    P    +D  R  ++  L    G  GM GGQ LD+  E++D   ET + +I
Sbjct: 134 AFSILADDRMPDVVTED--RLAMLSELARASGATGMCGGQALDMASEYLDISLET-LELI 190

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+  A   GA+ A    +     L  + +++G+ FQ+ DD+LD
Sbjct: 191 HHHKTGALLRAAVRLGALAAGETGRKALPWLDQYAKSIGLAFQVQDDILD 240


>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase,  (ggppsynthetase) (ggps)
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 295

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 24/217 (11%)

Query: 29  SHMQTQHNDRLL-SAIRYALL-GGKKIRSFL----VTECASLFNVNHLTALRVGAAIECI 82
           S+ QT     +L  ++ Y+L  GGK++R  L       C  + N+     +    AIE I
Sbjct: 22  SYFQTFPTPPILHDSVLYSLTAGGKRLRPILCIASYEACDGMENI-----VPYATAIEFI 76

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-- 140
           H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF I+S+     KD  
Sbjct: 77  HTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFTILSN-----KDYA 131

Query: 141 NIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           NI S  +L +   I    GL+GM+ GQ  D+  E    DE  V  I   KT A++  + +
Sbjct: 132 NISSNTLLKVISEISKAAGLRGMVAGQAYDLISEGKEPDERVVEFIHLYKTAAMIKASVK 191

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            GAI+A AS+ + + L  +G+++G+ FQ+ DD+LD E
Sbjct: 192 VGAILAEASEEKIKNLEIYGQSIGLAFQIVDDILDIE 228


>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
           8271]
          Length = 289

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 6/205 (2%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +  + ND L  ++ Y L+ GGK++R  L    A +        +     +E IH YSLIH
Sbjct: 20  LPWKANDVLSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCACGLEMIHTYSLIH 79

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLML 148
           DDLP++DN   RRG+PT H  + E TA++AG+GLLTY F++++S     L+  I+  ++ 
Sbjct: 80  DDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASDVPVPLERQIK--VIR 137

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
                +G QGM+ GQ+LD   E   +  +Q+  I  +KTGAL+  +   GAI+    + E
Sbjct: 138 ETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTASVRLGAILGGGLEEE 197

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
             +L  +   LG+ FQ+ DD+LD E
Sbjct: 198 IRQLSIYAAALGLAFQIKDDILDIE 222


>gi|325203376|gb|ADY98829.1| geranyltranstransferase [Neisseria meningitidis M01-240355]
          Length = 298

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E  A++ G+ L T AF++++ P + L  + +  ++  L    G +GM 
Sbjct: 99  RRGKPTCHIKYGEANALLTGDALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMA 157

Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +      Q  + Q   +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|224825912|ref|ZP_03699016.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
 gi|224602136|gb|EEG08315.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
          Length = 298

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 112/189 (59%), Gaps = 4/189 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY+ L GGK++R  LV     L + N     R+GAA+E IH YSL+HDD+P MD
Sbjct: 34  RLHEAMRYSTLDGGKRVRPLLVHAAGELVSANPEHLARIGAAVEMIHAYSLVHDDMPCMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPT H+ +D+ TA++ G+ L T AF+++++P   +    + +++ +L    G 
Sbjct: 94  DDVLRRGKPTCHVAFDDATALLVGDALQTLAFDVLATPLDGVAAAAQLEMVRTLARASGH 153

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ +D+    + +   ++  +  +KTGAL+  A   GA+     S  E ERL  F
Sbjct: 154 GGMAGGQAIDLASVGQTLSLPELEYMHCLKTGALIRAAVLLGALAGTPLSAEETERLDHF 213

Query: 214 GENLGIIFQ 222
            + +G+ FQ
Sbjct: 214 AKRIGLAFQ 222


>gi|55821223|ref|YP_139665.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus LMG 18311]
 gi|55823135|ref|YP_141576.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus CNRZ1066]
 gi|55737208|gb|AAV60850.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus LMG 18311]
 gi|55739120|gb|AAV62761.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus CNRZ1066]
          Length = 290

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 10/225 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K+ID  + D   +    + +     L+ AI Y++  GGK+IR  +  +    F +    +
Sbjct: 5   KKIDAAIRDFYQKKTPPVSSD----LIIAILYSVDSGGKRIRPLIFLDLLEGFGLELTPS 60

Query: 73  -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
              V A++E IH  SLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ L    F ++
Sbjct: 61  HFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFALV 120

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           +  +T+L   IR QL+ +L+H  G  GM+GGQMLD++ E   +D +Q+  I + KTG L+
Sbjct: 121 A--QTELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGKLL 178

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            F   +  I+A       E L+  G  +G+ FQ+ DD+LD   D 
Sbjct: 179 TFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADF 223


>gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
          Length = 311

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 121/217 (55%), Gaps = 10/217 (4%)

Query: 19  ILDDLLLQTASHMQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RV 75
           ++DD L   A+H+    +  LL  ++ Y+LL GGK++R  L    A L        L R 
Sbjct: 11  VVDDYL---ATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRA 67

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E IH YSLIHDDLP+MDN  +RRGKPT H  Y    A +AG+GLLT AFE +S   
Sbjct: 68  ACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSD-- 125

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFAC 193
            QLK  +R +L+  L    G  GM+ GQ  D+    + +   Q+  + + KTGAL+ +A 
Sbjct: 126 NQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAV 185

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +G ++A       + L  FGE  G+ FQ+ DD+LD 
Sbjct: 186 LAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDV 222


>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
 gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
          Length = 300

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 114/202 (56%), Gaps = 3/202 (1%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           + T+    L  A+RY+LL GGK++R  L      L   N   A+    A+E IH  SLIH
Sbjct: 30  LGTERPTSLSEAMRYSLLAGGKRLRPILCLAACELAGGNVAAAMPTAVALEMIHTMSLIH 89

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MDN  +RRG+PT H  Y E TAI+AG+ LLT AFEI++     +      +++  
Sbjct: 90  DDLPAMDNDDLRRGRPTNHKVYGEATAILAGDALLTRAFEIVALRSPGVSPECILKVIGE 149

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+   G  G++GGQM+D++ E   ++   +  I   KTGAL+      G ++  AS    
Sbjct: 150 LSLAAGAPGLVGGQMVDLESEGKEVNLDTLEYIHLHKTGALLSACVICGGLIGDASDELL 209

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           + LR +   +G+ FQ+ DD+LD
Sbjct: 210 QALRNYARGIGLAFQIIDDILD 231


>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 339

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 7/219 (3%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+ +   +    D++  ++ Y+L+ GGK+IR  L      +F  +   A+    A+E IH
Sbjct: 62  LEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIH 121

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SLIHDDLPSMDN  +RRGKPT H+ + E  AI+AG+ LL+ +FE ++     +     
Sbjct: 122 TMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLSTSFEHVARETKGVSAEKI 181

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMA 200
             ++  L  ++G +G+ GGQ++D++ E    T    +  I   KT  L+  A  SGA++ 
Sbjct: 182 VDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHIHKTATLLQVAVASGAVLG 241

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A+  E      F  N+G+ FQ+ADD+LD     EDL K
Sbjct: 242 GATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGK 280


>gi|292487451|ref|YP_003530323.1| geranyltranstransferase [Erwinia amylovora CFBP1430]
 gi|291552870|emb|CBA19915.1| geranyltranstransferase [Erwinia amylovora CFBP1430]
          Length = 264

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 109/192 (56%), Gaps = 4/192 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           ALLGGK++R FLV     +   +        AAIECIH YSLIHDDLP+MDN  +RRG+P
Sbjct: 5   ALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQP 64

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           T HI++ E +AI+AG+ L T AF I++ +P   +    R  ++  L    G+ GM GGQ 
Sbjct: 65  TCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAGMCGGQA 124

Query: 165 LDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIF 221
           LD+  E    T  ++  I + KTGAL+  A   GA+ A  S       L  F   +G+ F
Sbjct: 125 LDLAAEGKKVTLNELEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRFANAIGLAF 184

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 185 QVQDDILDVTGD 196


>gi|149377246|ref|ZP_01894993.1| geranyltranstransferase [Marinobacter algicola DG893]
 gi|149358434|gb|EDM46909.1| geranyltranstransferase [Marinobacter algicola DG893]
          Length = 299

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 5/204 (2%)

Query: 34  QHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q ++RL  A+RY++LGG K+IR  L    A+       +A+    ++E IH YSLIHDDL
Sbjct: 32  QGSERLQQAMRYSVLGGGKRIRPALCLAAATALGQPRESAIVPACSLELIHAYSLIHDDL 91

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN  +RRG+ T HI +DE TAI+AG+ L T AF  ++     + D +R  ++  L  
Sbjct: 92  PAMDNDDLRRGRATTHIAFDEATAILAGDALQTLAFGWLAEAPG-VDDQVRLAMIRELAT 150

Query: 153 NIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G QGM GGQ +D++   + +   Q+  + + KTGAL+  +   GA+ A   ++++   
Sbjct: 151 ASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATDVNEDQLAA 210

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + + LG+ FQ+ DDLLD E D
Sbjct: 211 LTVYSQTLGLAFQVQDDLLDIEGD 234


>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
 gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
          Length = 365

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 126/233 (54%), Gaps = 12/233 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQT--------QHNDRLLSAIRYALL-GGKKIRSFLVT 59
           LQE+ ++        +LQ A+ +          +   ++  ++RY+LL GGK++R  L  
Sbjct: 63  LQEDQRKPTFDFKSYMLQKANSVNKALDAAVSLKEPAKIHESMRYSLLAGGKRVRPVLCL 122

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   +   AL    A+E IH  SL+HDDLP MDN  +RRGKPT HI + E  A++A
Sbjct: 123 AACDLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLA 182

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---Q 176
           G+ LL++AFE I+     +      + +  L   IG +G++ GQ++DI  E + E    Q
Sbjct: 183 GDALLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQ 242

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  I   KT  L+  A   GAI+   +  E E+LR +  ++G++FQ+ DD+LD
Sbjct: 243 LEFIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILD 295


>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 306

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 122/222 (54%), Gaps = 10/222 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73
           R++  LD  L +  +H       RL  A+RY AL GGK++R  LV               
Sbjct: 23  RVEQALDYWLPEAQTHPA-----RLHQAMRYSALSGGKRLRPILVFATGQALGAAPTLLD 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
               A+ECIH YSLIHDDLP+MD+  +RRG+PT H  +DE TAI+AG+ L T AF I++ 
Sbjct: 78  GPACAVECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHILAH 137

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190
            P        R +++  L    G +GM GGQ +D+    + +D  Q+  +   KTGAL+ 
Sbjct: 138 DPGGVQNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGALIR 197

Query: 191 FACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCE 231
            + + GA+ A     E  +RL  +G+ +G+ FQ+ DD+LD E
Sbjct: 198 ASVQLGALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVE 239


>gi|323340824|ref|ZP_08081076.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644]
 gi|323091947|gb|EFZ34567.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644]
          Length = 299

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 11/212 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT-ECASLFNVNHLTALRVGAAI 79
           D+ LQ     +T H+     ++ Y++  GGK+IR  ++   C S         L V A++
Sbjct: 22  DVYLQQLDTRKTLHD-----SMSYSVDAGGKRIRPMIIMLVCDSFKKKIDQDVLDVCASL 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H YSLIHDDLP+MDN  +RRGK T H+ + E  AI+AG+GLLT AFE +   +T + 
Sbjct: 77  EFVHTYSLIHDDLPAMDNDELRRGKATNHVVFGESMAILAGDGLLTTAFECLG--QTSIS 134

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGA 197
              +  LM  L    G QGM+ GQ+ DI++E +  T  Q+  +   KTGAL+ +A ESG 
Sbjct: 135 AKTKCTLMSRLAFAAGPQGMVNGQVGDIENEGVKLTLPQLRNVHAQKTGALLRYAFESGG 194

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I+A  S      L+  G   G+ FQ+ DD++D
Sbjct: 195 ILAGVSDRALGELKELGNCFGLAFQIYDDIMD 226


>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 337

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 126/222 (56%), Gaps = 10/222 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-AL 73
           I+  LD+ ++ T      +  ++++ A++Y+L+ GGK+IR  L      +FN    T A+
Sbjct: 55  IEKALDESVVST-----EKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFNDGDSTPAM 109

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               ++E IH  SLIHDDLPSMDN  +RRGKPT H+ Y E  AI+AG+ LL+ +F  ++ 
Sbjct: 110 PAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLSDSFRHVAE 169

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
               +  +    +++ L  ++G +G+ GGQ++D++ E         +  I   KT  L+ 
Sbjct: 170 QTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHTHKTATLLQ 229

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A  SGAI+  AS  E +    F  N+G+ FQ+ADD+LD  +
Sbjct: 230 VAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQ 271


>gi|42520989|ref|NP_966904.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410730|gb|AAS14838.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 335

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 15/185 (8%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10  LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP MDN   RR + + H ++DE TA++AG+ LLT AFE++SS   +    
Sbjct: 70  VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK---- 125

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQKMKTG-------ALMC-FA 192
            R +++  L+  IG++GM+GGQ LDI  E ID   Q  +IQ   TG       ++ C   
Sbjct: 126 -RCEIIKVLSQAIGIRGMVGGQALDINSEHIDFSPQPSVIQVADTGIQKALPTSISCKKP 184

Query: 193 CESGA 197
           C+SGA
Sbjct: 185 CDSGA 189



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 10/76 (13%)

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GM  GQ   I++          I  MKT  L   +CE GAI+  A+  +++ L  +G NL
Sbjct: 220 GMTSGQADKIKE----------IHLMKTAKLFAASCEIGAIIGGATDKQRKALYNYGINL 269

Query: 218 GIIFQLADDLLDCEED 233
           G+IFQ  DD+ D E+D
Sbjct: 270 GLIFQAKDDIEDYEQD 285


>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 290

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L++ ++ +D+ L      T +         L  ++ Y+L  GGK+IR  L    A    
Sbjct: 6   ELEDYARLVDSYLAQFPWPTGT---------LAESMNYSLSAGGKRIRPVLALAAAHAVG 56

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    L    A+E IH YSLIHDDLP+MDN   RRG+   H  + E  AI+AG+ LLTY
Sbjct: 57  GDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDALLTY 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           AFE+++ P + +    + + +  +    G +GM+GGQMLD++ E   ++  ++  + ++K
Sbjct: 117 AFELLAQPMSGVDSQRQLRAVREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGA++  A   GAI+A  ++ + E L  + + +G+ FQ+ DD+LD E D
Sbjct: 177 TGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESD 225


>gi|78776538|ref|YP_392853.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497078|gb|ABB43618.1| farnesyl-diphosphate synthase [Sulfurimonas denitrificans DSM 1251]
          Length = 282

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 6/187 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L+    + +N   +  A     AIE +H YSLIHDDLP+MDN  +RRG+PT+
Sbjct: 33  GGKRFRPALLLGVVNAYNPLMIGGAYHAAYAIELLHTYSLIHDDLPAMDNSPLRRGEPTL 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H+ +DEVTAI+AG+ L TYAFE++S+      D  R +L+  L  N GL GM+ GQ +D 
Sbjct: 93  HVLFDEVTAILAGDALNTYAFEVLSN--APFSDFTRVELIRELATNGGLNGMVLGQAIDC 150

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             ++  +    V ++   KT  L+  + + GAI+    +   E L  FG  LG++FQ+ D
Sbjct: 151 YFENRVLSIDDVKILHTNKTAKLIAASLKMGAIIV-GEEKLAETLYDFGIKLGLLFQIQD 209

Query: 226 DLLDCEE 232
           D+LD  +
Sbjct: 210 DILDVTQ 216


>gi|167756949|ref|ZP_02429076.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402]
 gi|237734652|ref|ZP_04565133.1| geranyltranstransferase [Mollicutes bacterium D7]
 gi|167703124|gb|EDS17703.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402]
 gi|229382472|gb|EEO32563.1| geranyltranstransferase [Coprobacillus sp. D7]
          Length = 282

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 122/201 (60%), Gaps = 7/201 (3%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + ++  A++Y+L+ GGK+IR  ++ +    ++ N+   L +  AIE IH YSLIHDDLP 
Sbjct: 21  DSKVKEAMKYSLMAGGKRIRPVMMLQVIRSYDKNYQDYLDIACAIEMIHTYSLIHDDLPG 80

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRG+ T H Q+DE TAI+AG+ LL  A  +I   KT++ D ++  L+ +L    
Sbjct: 81  MDNDDLRRGRLTCHKQFDEATAILAGDALLNEAVNVI--IKTKVPDELKISLLATLYQAS 138

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G+ GM+ GQ LD++ E       Q+ +I   KTG L+  A + GA++A+   ++++    
Sbjct: 139 GINGMILGQALDMEYETKLATRDQLDLIHHHKTGDLISAAMKMGALIANP--DDQKTWVE 196

Query: 213 FGENLGIIFQLADDLLDCEED 233
            G  +G+ FQ+ DD+LD   D
Sbjct: 197 IGYKIGLAFQIQDDVLDVVGD 217


>gi|99035065|ref|ZP_01314856.1| hypothetical protein Wendoof_01000303 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 335

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 15/185 (8%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10  LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP MDN   RR + + H ++DE TA++AG+ LLT AFE++SS   +    
Sbjct: 70  VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSLNEK---- 125

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQKMKTG-------ALMC-FA 192
            R +++  L+  IG++GM+GGQ LDI  E ID   Q  +IQ   TG       ++ C   
Sbjct: 126 -RCEIIKVLSQAIGIRGMVGGQALDINSEHIDFSPQPSVIQVADTGIQKALPTSISCKKP 184

Query: 193 CESGA 197
           C+SGA
Sbjct: 185 CDSGA 189



 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 13/89 (14%)

Query: 148 LSLTHNIGL---QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           L L H+ G     GM  GQ   I++          I  MKT  L   +CE GAI+  A+ 
Sbjct: 207 LKLQHSYGCMYDAGMTSGQADKIKE----------IHLMKTAKLFAASCEIGAIIGGATD 256

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
            +++ L  +G NLG+IFQ  DD+ D E+D
Sbjct: 257 KQRKALYNYGINLGLIFQAKDDIEDYEQD 285


>gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
 gi|225208394|gb|EEG90748.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
          Length = 300

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 127/230 (55%), Gaps = 12/230 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
            +E  K    +++ LL++     +  +  +++ A+ Y+++ GGK++R  L+ E   LF  
Sbjct: 7   FKEEMKERTEVIEKLLVKYLPKAEG-YQSQIMEAMEYSVMAGGKRLRPMLMQETYRLFGG 65

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+E IH YSL+HDDLP+MDN   RRG+ T HI Y E   I+AG+ LL YA
Sbjct: 66  EGKEIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEAMGILAGDALLNYA 125

Query: 128 FEIIS-----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           FE        +P+  L   +  + +  L    G+ GM+GGQ++D+      +DE  +  I
Sbjct: 126 FETAVKAFEIAPEKSL---LIGKALKILAEKAGIYGMIGGQVVDVASCGVGLDEGMLNFI 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ++KTGAL+  +   GA++A A   E E+++     +GI FQ+ DD+LD 
Sbjct: 183 YELKTGALIESSMMIGALLAGAEDAELEKVQKIASGVGIAFQIQDDILDV 232


>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
 gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
          Length = 295

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 132/230 (57%), Gaps = 9/230 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L+E S  I+  ++  L +   + +T     +  A+ Y+L  GGK++R  L+ E   L  
Sbjct: 6   ELKERSIYIEDKIESYLPKEEGYQKT-----IFEAMNYSLRAGGKRLRPILLMEAYKLCQ 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 +    A+E IH YSLIHDDLP++DN  +RRGKPT HI + E  AI+AG+ LL  
Sbjct: 61  GQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHIVFGEAMAILAGDALLNT 120

Query: 127 AFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           A+E ++++     +  I  +    ++   G+ GM+GGQ++D++ E   ID+ ++  I   
Sbjct: 121 AYETMLNAAFKHSRPEISLRAAYEISRGAGIYGMIGGQVVDVESEDKKIDKDKLDYIHMN 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT A++  +  +GAI+A   ++  E L  + EN+G+ FQ+ DD+LD E D
Sbjct: 181 KTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDDILDIEGD 230


>gi|17481244|dbj|BAB79205.1| farnesyl diphosphate synthase [Rhodopseudomonas palustris]
          Length = 147

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 95/147 (64%), Gaps = 4/147 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P+MDN  +RRG+PT+H  YD+ TAI+AG+ LLT+AF+I++  +      +R  L  
Sbjct: 1   HDDMPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVRLLLTR 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            L    GL GM+GGQMLD+  E  F D     V  +Q+MKTGAL+ + C +GAI+  AS 
Sbjct: 61  VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASP 120

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
           ++   L  +G  LG  FQ+ADD+LD E
Sbjct: 121 DQYRALDDYGRALGEAFQIADDILDVE 147


>gi|75250205|sp|Q94ID7|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
           Short=GGPP synthase; Short=GGPS; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; Flags: Precursor
 gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
          Length = 370

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 4/201 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   ++  ++RY+LL GGK++R  L      L   N   A+    A+E IH  SLIHDDL
Sbjct: 101 QEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDL 160

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT HI + E  A++AG+ LL +AFE I+     +      + +  L  
Sbjct: 161 PCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAK 220

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            IG +G++ GQ++DI  E    +D  ++  I   KT  L+  A   GAI+   +  E E+
Sbjct: 221 AIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEK 280

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           LR +  ++G++FQ+ DD+LD 
Sbjct: 281 LRKYARDIGLLFQVVDDILDV 301


>gi|152968946|ref|YP_001334055.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238893358|ref|YP_002918092.1| geranyltranstransferase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042444|ref|ZP_06015604.1| geranyltranstransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|150953795|gb|ABR75825.1| geranyltranstransferase (farnesyldiphosphate synthase) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238545674|dbj|BAH62025.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259040219|gb|EEW41330.1| geranyltranstransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 299

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 13/211 (6%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   N  L+ A+ Y ALLGGK++R FLV     +F V   T     AA+ECIH YSL+HD
Sbjct: 25  QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGEMFGVCRTTLDAPAAAVECIHAYSLMHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MD+  +RRG PT HI++ E  AI+AG+ L T AF I+S +P   + D  R  ++  
Sbjct: 85  DLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMVDVPDRDRLAMVSE 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+ GM GGQ LD+Q E   +D   +  I + KTGAL+  A   GA+    S  E+
Sbjct: 145 LAQASGVAGMCGGQALDLQAEGQQVDLQALERIHRHKTGALIRAAVRMGAL----SAGER 200

Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233
            R     L  + EN+G+ FQ+ DD+LD   D
Sbjct: 201 GRAALPALDRYAENIGLAFQVQDDILDVVGD 231


>gi|24379060|ref|NP_721015.1| putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
 gi|24376957|gb|AAN58321.1|AE014902_9 putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
          Length = 289

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 6/205 (2%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSL 87
           + QT  +  L+ A+ Y++  GGK+IR  L+ E    F +    A  +V A++E IH  SL
Sbjct: 16  YAQTHVSQDLIEAVLYSVDAGGKRIRPLLLLEILQGFGLVLTEAHYQVAASLEMIHTGSL 75

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDDLP+MDN   RRG+ T H ++ E TAI+AG+ L    F +++  K  L+ +I+ +L+
Sbjct: 76  VHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLDPFGLLA--KADLRADIKIKLV 133

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             L+   G  GM+GGQMLDI+ E +  +  Q+  I   KTG L+ F   +  I+A  S+ 
Sbjct: 134 AELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLTFPFVAAGIIAELSEK 193

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
              RLR  GE +G+ FQ+ DD+LD 
Sbjct: 194 ALARLRQVGELVGLAFQVRDDILDV 218


>gi|310766823|gb|ADP11773.1| Geranyltranstransferase [Erwinia sp. Ejp617]
          Length = 299

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/201 (41%), Positives = 115/201 (57%), Gaps = 13/201 (6%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+ Y ALLGGK++R FLV     +   N        AAIECIH YSLIHDDLP+MDN
Sbjct: 32  LVNAMEYGALLGGKRLRPFLVYATGDMLRANDAALDAPAAAIECIHAYSLIHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  AI+AG+ L T AF I++ +P   +    R  ++  L    G+
Sbjct: 92  DSLRRGQPTCHIKFGEEAAILAGDALQTLAFSILADAPMPGVVAESRIAMLSELAQASGV 151

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM GGQ LD+  E    T  ++  I + KTGAL+  A   GA+ A     E+ R     
Sbjct: 152 AGMCGGQALDLAAEGKQVTLNELEQIHRHKTGALIRSAVRLGALTA----GERGRAALPA 207

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  F   +G+ FQ+ DD+LD 
Sbjct: 208 LDRFANAIGLAFQVQDDILDV 228


>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 299

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 115/207 (55%), Gaps = 5/207 (2%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T H  RL  A+RY AL GGK++R  LV        V          A+E IH YSLIHD
Sbjct: 28  ETTHPARLHEAMRYSALGGGKRVRPVLVYGAGQALGVAPERLDGPACAVELIHVYSLIHD 87

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
           DLP+MDN  +RRGKPT H  +DE  AI+AG+ +   AF+I+S     L D  R  ++M +
Sbjct: 88  DLPAMDNDDLRRGKPTCHKAFDEAMAILAGDAMQALAFQILSMDPDMLDDPARRLRMMET 147

Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNE 206
           L    G +GM GGQ +D+    + +D  Q+  +   KTGAL+  +   GA+ A    +  
Sbjct: 148 LARAAGSRGMAGGQAIDLGSVGKQLDIAQLEDMHVHKTGALIRASVLLGALSAPEVDKAH 207

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
            E L  F + +G+ FQ+ DD+LD E D
Sbjct: 208 LENLDRFAKCVGLAFQIRDDILDVEGD 234


>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
          Length = 316

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 11/223 (4%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           E S+ ++  L+D     A  ++  H  ++  A+RY+LL GGK++R  L      +   N 
Sbjct: 31  EKSRSVNQALND-----AVSLREPH--KIHEAMRYSLLAGGKRVRPVLCIAACEVVGGNE 83

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            TA+    +IE IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL +AFE
Sbjct: 84  STAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALLAFAFE 143

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTG 186
            I+   + +        +  L  +IG +G++ GQ++DI  E    I   ++  I   KT 
Sbjct: 144 HIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIHLHKTA 203

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AL+  +   GAI+      E E+LR F   +G++FQ+ DD+LD
Sbjct: 204 ALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLD 246


>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
          Length = 365

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 10/218 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           +++  LDD +         Q   ++  A+RY+LL GGK++R  L      +   +   A+
Sbjct: 85  KVNKALDDAI-------PMQEPIKIHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAI 137

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               ++E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++ G+ LL+ AFE ++S
Sbjct: 138 PAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGDALLSLAFEHVAS 197

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
               +      Q +  L   +G +G++ GQ++DI  E   +  T++  I   KTG L+  
Sbjct: 198 KTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEYIHNHKTGKLLEA 257

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A   GAI+   ++ E ER+R +   LG++FQ+ DD+LD
Sbjct: 258 AVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILD 295


>gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
          Length = 372

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 11/228 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S + E + R++  LDD        +  +   ++  A+RY+LL GGK++R  L      L 
Sbjct: 83  SYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELV 135

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL 
Sbjct: 136 GGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLA 195

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQK 182
           +AFE I+     +      + +  L  +IG +G++ GQ++DI  E + +    ++  I  
Sbjct: 196 FAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHL 255

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            KT AL+  A   GAI+   S  + E+LR F   +G++FQ+ DD+LD 
Sbjct: 256 HKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDV 303


>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 310

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 126/234 (53%), Gaps = 11/234 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+    + L E  K ++  LD+ +L        +  +++  A+RY+LL GGK++R  L  
Sbjct: 15  MDFDFKAYLLEKGKSVNQALDNAVL-------IREPEKIHEAMRYSLLAGGKRVRPILCI 67

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   N   A+    A+E IH  SL+HDDLP MDN  +RRGKPT H  Y E  A++A
Sbjct: 68  AACELVGGNESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 127

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---Q 176
           G+ LL +AFE +++    +  +   + +  L  +IG +G++ GQ++DI    +       
Sbjct: 128 GDALLAFAFEYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDH 187

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +  I   KT AL+  +   GAI+   +  + ERLR F   +G++FQ+ DD+LD 
Sbjct: 188 LEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDV 241


>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
 gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
          Length = 300

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 37  DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL  A+RYA+LGG K++R  LV    ++         R+  A+E IH YSL+HDD+P M
Sbjct: 36  ERLHEAMRYAVLGGGKRVRPLLVHAAGAIGGAQPERLDRIACAVELIHAYSLVHDDMPCM 95

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNI 154
           D+  +RRGKPTVH++YD+ TA++ G+ L T AF+++ S+P T +       + L L    
Sbjct: 96  DDDVLRRGKPTVHVEYDDATALLVGDALQTLAFQVLASAPVTDMPTRQLGMIGL-LAMAS 154

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +GM GGQ +D+      +D  ++  +   KTGAL+  +   GA          ERL  
Sbjct: 155 GSRGMAGGQAIDLAAVGRQLDLRELEFMHIHKTGALIRCSVLLGAQAGTVDGETLERLDR 214

Query: 213 FGENLGIIFQLADDLLDCEED 233
           + +  G++FQ+ DD+LD E D
Sbjct: 215 YAKLTGLLFQVVDDILDAEAD 235


>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
 gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
          Length = 309

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 127/229 (55%), Gaps = 11/229 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L+E  + ++  LD  +  T         +++  A+RY+LL GGK++R  L      
Sbjct: 19  LVSYLKEKKQLVEAALDASIPITCP-------EKIYEAMRYSLLAGGKRLRPILCLTTCE 71

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       AL    A+E IH  SLIHDDLP+MDN   RRG+ T H  Y E  AI+AG+ L
Sbjct: 72  LMGGTVEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDAL 131

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           L+YAFE +++    +       ++  L   +G  G++GGQ+LD++ E    I    +  I
Sbjct: 132 LSYAFEHVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILKFI 191

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+  +  SGAI+A A+  + ERL  + +N+G+ FQ+ DD+LD
Sbjct: 192 HVHKTGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILD 240


>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259366|gb|EDS73332.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
           17244]
          Length = 294

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 9/207 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  +  Y+L +GGK+IR  L+ E       +   AL + AA+E IH YSLIHDDLP MD+
Sbjct: 31  IFESFNYSLFVGGKRIRPILLMESCKCVGGDTNEALPLMAAMEMIHTYSLIHDDLPCMDD 90

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGL 156
             +RRGKPT H  Y E TA++AG+ LL  A+E +       KD N   + M  +  + G+
Sbjct: 91  DELRRGKPTNHTVYGEATALLAGDSLLNLAYETMLKGAKSSKDINRYVEAMNVIADSAGV 150

Query: 157 QGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +GM+ GQ++D++ E  +   ET  F I   KTGA++  +  SGA++  A+ +E + L  +
Sbjct: 151 KGMIAGQVMDMESEGKEPDGETLDF-IHDNKTGAILRASVISGAVVGGATDDELKNLSEY 209

Query: 214 GENLGIIFQLADDLLDC---EEDLPKK 237
              +G++FQ+ DD+LD    EE L KK
Sbjct: 210 ARAIGLMFQVVDDILDVVSDEETLGKK 236


>gi|296101542|ref|YP_003611688.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056001|gb|ADF60739.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 299

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 126/208 (60%), Gaps = 7/208 (3%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   N  L+ A+ Y ALLGGK++R FLV    ++F ++  T     AA+ECIH YSLIHD
Sbjct: 25  QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDTTLDAPAAAVECIHAYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MD+  +RRG+PT HI++ E  AI+AG+ L T AF I+S +P  ++ D  R  ++  
Sbjct: 85  DLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMAEVSDRDRLAMVSE 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+ GM GGQ LD++ E   ++  Q+  I + KTGAL+  A   GA+ A   Q  K
Sbjct: 145 LAMASGVAGMCGGQALDLEAEGRQVNLEQLERIHRHKTGALIRAAVRLGALSA-GVQGRK 203

Query: 208 ER--LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPILDRYAESIGLAFQVQDDILDVVGD 231


>gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
 gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
          Length = 289

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 126/213 (59%), Gaps = 6/213 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++ L      + ++N  +  A++Y++ +GGK+IR  L+    S++  N+   + +  AIE
Sbjct: 11  NVWLNNYFENKGRYNKMVYDAMKYSVEVGGKRIRPILMLCTYSVYKDNYKEIMPMACAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLL  A  I+ +    L +
Sbjct: 71  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFN--YSLNN 128

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGA 197
           +I++ +    ++   G++GM+GGQ++DI  E   I    +  + K KTG L+  +  +GA
Sbjct: 129 DIKALKASKIISEAAGVEGMIGGQVVDIISEGKKISIDNLRYMHKNKTGKLIKSSIIAGA 188

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           I+  A   +   L  FGE LG+ FQ+ DD+LD 
Sbjct: 189 ILGDAPNEDVNILDEFGEKLGLAFQIKDDILDV 221


>gi|328952416|ref|YP_004369750.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
 gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
          Length = 296

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/201 (42%), Positives = 125/201 (62%), Gaps = 5/201 (2%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
             R++ A+RY+LL GGK++R  L    A     N    + V  A+E IH YSLIHDDLP+
Sbjct: 29  GQRVVEAMRYSLLAGGKRLRPILCLAAAEAVAGNVEQVMPVAGALEMIHTYSLIHDDLPA 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTH 152
           MD+   RRG+PT H ++DE TAI+AG+GLLT AFE++++  T    + ++  +++ ++  
Sbjct: 89  MDDDDFRRGRPTCHKKFDEATAILAGDGLLTAAFEVLAAAATNHPAQASVYHEVVQTIAR 148

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G QGM+GGQM D+  E    T  QV  I ++KTGAL+  +  SGA++   S  +   L
Sbjct: 149 AAGYQGMVGGQMADLLAEGQPSTLEQVEAIHRLKTGALLTASVRSGALLGGGSARDILAL 208

Query: 211 RCFGENLGIIFQLADDLLDCE 231
             +GE  G+IFQ+ DDLLD E
Sbjct: 209 THYGEKFGLIFQITDDLLDVE 229


>gi|224437990|ref|ZP_03658929.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
 gi|313144436|ref|ZP_07806629.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
 gi|313129467|gb|EFR47084.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
          Length = 289

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 123/226 (54%), Gaps = 8/226 (3%)

Query: 14  KRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           + I  IL D    LL  A  + + H     +       GGK+ R  LV    +      +
Sbjct: 2   QHITEILHDFESFLLAQAPQIPSFHQHYEKAVWEMVQNGGKRFRPALVFSVLNALAPQLV 61

Query: 71  -TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A     +IECIH YSLIHDDLP MDN  +RRG PT+H +Y E  A++ G+GL TYAF 
Sbjct: 62  KNAFLPALSIECIHTYSLIHDDLPCMDNASLRRGHPTLHTKYGETLALLVGDGLNTYAFA 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGA 187
           +++  + +L   ++  L+ SL  N G+ GM+ GQMLD   +++ +   Q+  I   KT  
Sbjct: 122 LLA--QARLDSQLKLALIESLAINAGIGGMVLGQMLDCEFENQALALEQLQTIHTNKTAK 179

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  + E GAI+A+A    ++ L  FG  LG+ FQL DD++D  +D
Sbjct: 180 LIATSLEFGAIIANADSKLRKALYDFGLKLGVYFQLRDDIIDICQD 225


>gi|54298220|ref|YP_124589.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris]
 gi|53752005|emb|CAH13431.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris]
          Length = 298

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 24/207 (11%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++ SA+ YAL  GGK+IR  LV     L +V+      + AA+E  HCYSLIHDDLP+MD
Sbjct: 30  KIRSALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154
           N  +RRGKP+ H  +DE TAI+ G+G+   A E++    T+L   + +  ++++T  +  
Sbjct: 90  NDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVV---LTRLSPLLPAAQVVAITQVLVN 146

Query: 155 --GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM--CFACESGAIMAHASQNE- 206
             G+ GM+ GQ LD+ +     + E Q+  I  +KTG L+  CF       M  A+QNE 
Sbjct: 147 ASGISGMVSGQSLDLSELAKLSVTEEQLREIHLLKTGKLILACFE------MVLAAQNEV 200

Query: 207 ----KERLRCFGENLGIIFQLADDLLD 229
               K  L+ +G+++G++FQ+ DD LD
Sbjct: 201 SEQIKSALKTYGKHIGLVFQMQDDYLD 227


>gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
 gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
          Length = 295

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 4/200 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            +N  L+ A+RY+LL GGK++R  LV   A         A     AIE IH YSLIHDDL
Sbjct: 29  HYNTDLIEAMRYSLLLGGKRVRPVLVYAAAYATGGISAAADDCACAIEAIHTYSLIHDDL 88

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MD+  +RRG+PT HI Y E TAI+AG+ L   AFE +++ +  +  +   Q + +L  
Sbjct: 89  PAMDDDALRRGQPTCHIAYSEATAILAGDALQCQAFEWLANSQ-HMPASAALQAIAALAK 147

Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G  GM+ GQ +D+   D+ +D   +  + + KTGAL+  + E GAI A A+  +  +L
Sbjct: 148 ASGASGMVLGQAIDLAAVDKSVDLQHLETMHQHKTGALISASVEMGAIAAGATPTQTAQL 207

Query: 211 RCFGENLGIIFQLADDLLDC 230
           R +   +G+ FQ+ DD+LD 
Sbjct: 208 RQYASAIGLAFQVQDDILDV 227


>gi|323495108|ref|ZP_08100195.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio brasiliensis LMG 20546]
 gi|323310659|gb|EGA63836.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio brasiliensis LMG 20546]
          Length = 294

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 132/241 (54%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q N++++D       LQ+  H     N  L+ A+RY LL GGK+ R FLV 
Sbjct: 1   MQEALTSLQQRNNQQLDN-----WLQSLPH----QNLPLIEAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKLEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           G+ L T AF I++  +   + +N R +++  L    G  GM  GQ LD+  ++  +   +
Sbjct: 112 GDALQTLAFTILADGQLNPEAENYRIKMVKVLADASGANGMCMGQALDLAAENRNVSLQE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKER----LRCFGENLGIIFQLADDLLDCEE 232
           +  I + KTGALM  A   GA+   A+  + ER    L  + + +G+ FQ+ DD+LD   
Sbjct: 172 LEEIHRNKTGALMKSAIRLGAL---AAGEKGERVLPLLDQYADAIGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
           NIES-843]
 gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
           NIES-843]
          Length = 309

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 131/239 (54%), Gaps = 14/239 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L+E    +++ LD       S +   +  ++  A+RY+LL GGK++R  L      
Sbjct: 19  LASYLEEKRLIVESALD-------SSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCE 71

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   AL    A+E IH  SLIHDDLP+MDN   RRGK T H  + E  AI+AG+GL
Sbjct: 72  LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           L YAFE +++    +      +++  L   +G  G++GGQ+LD++      I    +  I
Sbjct: 132 LAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFI 191

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
              KTGAL+  +  SGA++A A   +  +L  + +N+G+ FQ+ DD+LD    +E+L K
Sbjct: 192 HTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGK 250


>gi|290580921|ref|YP_003485313.1| putative farnesyl diphosphate synthase [Streptococcus mutans
           NN2025]
 gi|254997820|dbj|BAH88421.1| putative farnesyl diphosphate synthase [Streptococcus mutans
           NN2025]
          Length = 289

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 6/205 (2%)

Query: 30  HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSL 87
           + QT  +  L+ A+ Y++  GGK+IR  L+ E    F +    A  +V A++E IH  SL
Sbjct: 16  YAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGLVLTEAHYQVAASLEMIHTGSL 75

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDDLP+MDN   RRG+ T H ++ E TAI+AG+ L    F +++  K  L+ +I+ +L+
Sbjct: 76  VHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLDPFGLLA--KADLRADIKIKLV 133

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             L+   G  GM+GGQMLDI+ E +  +  Q+  I   KTG L+ F   +  I+A  S+ 
Sbjct: 134 AELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANKTGKLLTFPFVAAGIIAELSEK 193

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
              RLR  GE +G+ FQ+ DD+LD 
Sbjct: 194 ALARLRQVGELVGLAFQVRDDILDV 218


>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 297

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 3/198 (1%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +R+  A+RY+LL GGK++R  L      L       AL    A+E IH  SLIHDDLP
Sbjct: 31  YPERIYEAMRYSLLAGGKRLRPILCLAACELAGGTVEQALPTACALEMIHTMSLIHDDLP 90

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRGKPT H  + E  AI+AG+ LL +AFE I+S    +   +  Q++  + H 
Sbjct: 91  AMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFAFEHIASQTQGVPPQLVLQVIARIGHA 150

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +   G++GGQ++D++ E   I    +  I   KTGAL+  +  SG I+A   +     L 
Sbjct: 151 VAATGLVGGQVVDLESEGKAISLETLEYIHSHKTGALLEVSVVSGGILAGGDEELLAHLS 210

Query: 212 CFGENLGIIFQLADDLLD 229
            +  ++G+ FQ+ DD+LD
Sbjct: 211 RYARDIGLAFQIVDDILD 228


>gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
           27755]
 gi|166029775|gb|EDR48532.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
           27755]
          Length = 300

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 122/211 (57%), Gaps = 5/211 (2%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           LQ     Q  +   ++ A+ Y+LL GGK++R  L+ E  +LF  +        AAIE +H
Sbjct: 22  LQNYLPKQKGYQKIIMEAMGYSLLAGGKRLRPMLMKETYTLFGGHSKVIEPFMAAIEMVH 81

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNI 142
            YSL+HDDLP+MDN   RRG+ T H+ Y E  AI+AG+ LL YAFE  + +   + +D++
Sbjct: 82  TYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILAGDALLNYAFETAVKAFVLEPEDSM 141

Query: 143 R-SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM 199
                +  L    G+ GMLGGQ++D+++    + +  +  I ++KTGAL+  A   GAI+
Sbjct: 142 TIGNAIRVLGEKAGIYGMLGGQVIDVKETGHAVSKDVLDTIYELKTGALIEAAMMIGAIL 201

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             ASQ E + +      +G+ FQ+ DD+LD 
Sbjct: 202 GGASQEEVKTVERIASLVGLAFQVQDDILDV 232


>gi|330006916|ref|ZP_08305788.1| polyprenyl synthetase [Klebsiella sp. MS 92-3]
 gi|328535670|gb|EGF62119.1| polyprenyl synthetase [Klebsiella sp. MS 92-3]
          Length = 299

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 13/211 (6%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   N  L+ A+ Y ALLGGK++R FLV     +F V   T     AA+ECIH YSL+HD
Sbjct: 25  QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGEMFGVCRTTLDAPAAAVECIHAYSLMHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MD+  +RRG PT HI++ E  AI+AG+ L T AF I+S +P   + D  R  ++  
Sbjct: 85  DLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFSILSDAPMVDVPDRDRLAMVSE 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+ GM GGQ LD+Q E   +D   +  I + KTGAL+  A   GA+    S  E+
Sbjct: 145 LAQASGVAGMCGGQALDLQAEGQQVDLQALERIHRHKTGALIRAAVRLGAL----SAGER 200

Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233
            R     L  + EN+G+ FQ+ DD+LD   D
Sbjct: 201 GRAALPALDRYAENIGLAFQVQDDILDVVGD 231


>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 296

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|227530530|ref|ZP_03960579.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
 gi|227349536|gb|EEJ39827.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
          Length = 290

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 111/196 (56%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L S++ Y++  GGK++R  L      +F    +   ++   AIE +H YSLIHDDLP+MD
Sbjct: 28  LASSMEYSVNAGGKRLRPALTLTTVQIFGGQLNQNVMKASTAIELLHTYSLIHDDLPAMD 87

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H ++    A +AG+GLLT AF+ ++    QL    +++L L+L    G 
Sbjct: 88  NDDLRRGKPTNHKKFGAGMATLAGDGLLTMAFQWLTD--NQLPTETQAELTLALAKAAGP 145

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQ  DI+ E  + T  Q+  + + KTG L+ +A  +G I+       K  L  FG
Sbjct: 146 AGMVAGQARDIEGEHQNLTLEQLRYLHRQKTGDLLSYAVLAGGIITKQDSTTKNLLADFG 205

Query: 215 ENLGIIFQLADDLLDC 230
              G+ FQ+ DDL+D 
Sbjct: 206 AQFGLAFQIYDDLMDV 221


>gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
 gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
          Length = 298

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 127/238 (53%), Gaps = 22/238 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L S  Q N+++++  LD L            N  L+ A+RY L LGGK+ R FLV     
Sbjct: 9   LASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVYATGE 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +        +AIECIH YSLIHDDLP+MD+  +RRG+PT H+++DE TAI+ G+ L
Sbjct: 60  MLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGDAL 119

Query: 124 LTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180
            T AF I++        +  R  ++ +L    G QGM  GQ LD+  ++  +   ++  I
Sbjct: 120 QTLAFTILAEGTLSADGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEELEEI 179

Query: 181 QKMKTGALMCFACESGAIMAHASQNEK-----ERLRCFGENLGIIFQLADDLLDCEED 233
            + KTGAL+  A   GA+ A     EK      +L  +   +G+ FQ+ DD+LD   D
Sbjct: 180 HRNKTGALIRCAVRLGALAA----GEKGLAILPQLEKYSTAIGLAFQVQDDILDIISD 233


>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
           pyrophosphate synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
 gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
 gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
 gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
 gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
 gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
 gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
 gi|74489206|gb|EAO52676.1| Dimethylallyltransferase  / Geranyltranstransferase /
           Geranylgeranyl pyrophosphate synthetase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
 gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
 gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
 gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
 gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
 gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
 gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
 gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 296

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|253583347|ref|ZP_04860545.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
 gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
          Length = 295

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 3/206 (1%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + +   ++YA+L GGK++R  L+     + + +    +   AAIE IH YSL+HD
Sbjct: 24  ELNYPEVIAEGMKYAVLNGGKRLRPILLFMVLDILDCDKEKGIASAAAIEMIHSYSLVHD 83

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H ++ E   I+ G+ LLT+AF I++     L      +++   
Sbjct: 84  DLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYILTEKNKHLPAEKIVEIVRLT 143

Query: 151 THNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           +   G+ GM+GGQM+DI  E   ID   +  +   KTG LM    E   I+  A + E+E
Sbjct: 144 SSYAGINGMIGGQMVDIASEGKKIDLETLKYMHSNKTGKLMKLPVELACIIGDADREERE 203

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDL 234
            L  F E +G+ FQ+ DD+LD E D 
Sbjct: 204 VLVKFSELIGLAFQIKDDILDIEGDF 229


>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
 gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
          Length = 298

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 6/202 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +A+ Y+L  GGK++R  LV         +  TAL    AIE +H YSLIHDDLP+MD+
Sbjct: 37  LKAAMSYSLSAGGKRLRPILVLLSCEACGGDQSTALPAACAIEMVHTYSLIHDDLPAMDD 96

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG PT HI++ E  AI+AG+ LLT AFE++++ + ++K +  +   + L +  G  
Sbjct: 97  DELRRGLPTSHIKFGEANAILAGDALLTRAFELLAN-QIEVK-SCAAACCVDLANAAGAV 154

Query: 158 GMLGGQMLDIQDEFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           GM+GGQ+ D++ E ++   + +   I K KTG L+C A   GA +  A     + L  +G
Sbjct: 155 GMVGGQVADLESEHLENPTLEILEAIHKRKTGRLICSALTMGARIGGADPATLKNLERYG 214

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
             +G+ FQ+ DDLLD   D  K
Sbjct: 215 TCIGLAFQITDDLLDLTGDEEK 236


>gi|59711319|ref|YP_204095.1| geranyltranstransferase [Vibrio fischeri ES114]
 gi|59479420|gb|AAW85207.1| geranyltranstransferase [Vibrio fischeri ES114]
          Length = 301

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 119/202 (58%), Gaps = 9/202 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++Y+LL GGK+ R +LV   A +  +    A    AAIEC+H YSLIHDDLP+MDN
Sbjct: 37  LTEAMKYSLLLGGKRARPYLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDN 96

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNI 154
             +RRG  T HI+YDE TAI+AG+ L T AFEI+++   QL D+    R  ++  L+   
Sbjct: 97  DDLRRGHATCHIKYDEATAILAGDALQTLAFEILAN--GQLSDDAETSRIDMIRVLSKAS 154

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211
           G  GM  GQ LD+Q E   +D   +  I   KTGAL+  A + GA+ A    +    +L 
Sbjct: 155 GASGMCMGQSLDLQAEGKKVDLASLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLE 214

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + + +G+ FQ+ DD+LD   D
Sbjct: 215 IYADAIGLAFQVQDDILDIISD 236


>gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 297

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 11/209 (5%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + N  +   +RY++L GGK++R  LV   A LF V     +    AIE +H YSLIHDDL
Sbjct: 27  KDNSVVSQGMRYSVLAGGKRLRPVLVILAAELFGVKAENVIPAACAIEYLHTYSLIHDDL 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN  +RRG    H ++ E  AI+ G+ LLT +F +I+  K+  K NI   + + L +
Sbjct: 87  PAMDNDDLRRGISANHKKFGEAAAILCGDALLTESFSLITKSKSSEK-NINEAVRI-LAY 144

Query: 153 NIGLQGMLGGQMLDI--------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             G +GM+ GQ  DI        +++ +   ++  IQ  KT ALM  + + GA++A A +
Sbjct: 145 YGGYKGMIAGQTEDILETGKWSKKNKILLGEKIKFIQIQKTAALMIASLKIGAVLAGADK 204

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
              + L  +G+N GI FQ+ DD+LD   D
Sbjct: 205 EGLKALEVYGKNAGIAFQIVDDILDVYAD 233


>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 291

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +D L  A+ Y+L+ GGK++R  L+   A     +    L V  A+E IH YSLIHDDLP+
Sbjct: 27  DDTLRQAMAYSLMAGGKRLRPVLLMAAADAVGGDGAKFLSVACALEMIHTYSLIHDDLPA 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  + +  AI+AG+GLLT AF +I   +    D +  +++  ++   
Sbjct: 87  MDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFTVILRQQDVSADTL-LRVVDEISRAA 145

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +GM+GGQ+LD++ E   I   ++  +   KTGAL   A  SGAI+  AS+ +   L  
Sbjct: 146 GAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLASLTT 205

Query: 213 FGENLGIIFQLADDLLDC---EEDLPK 236
           + E  G+ FQ+ DD+LD     ED+ K
Sbjct: 206 YAEQFGLAFQITDDILDVVGTAEDIGK 232


>gi|145629449|ref|ZP_01785247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
 gi|144978292|gb|EDJ88056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
          Length = 296

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       S+     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESY-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
          Length = 387

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 10/211 (4%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +  ++  ++RY+LL GGK++R  L      L       A+    A+E IH  SLIHDDLP
Sbjct: 118 YPQKIHESMRYSLLAGGKRVRPVLCIAACELVGGREELAMPTACAMEMIHTMSLIHDDLP 177

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLT 151
            MDN  +RRGKPT H  + + TA++AG+ L  +AFE  +  + K+   D I  + +  L 
Sbjct: 178 CMDNDDLRRGKPTNHKVFGQDTALLAGDALHAFAFEHIVAFTSKSVGSDGIL-RAVTELA 236

Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
              G QG++GGQ++DI   +D F+D   +  I   KT  L   A   GAI+  AS +E E
Sbjct: 237 RATGPQGIMGGQIVDIASERDAFVDLQTLEWIHIHKTAVLFECATVCGAIIGGASGDEIE 296

Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           R+R F   LG++FQ+ DD+LD     EDL K
Sbjct: 297 RIRRFARYLGLLFQVVDDILDVTKSSEDLGK 327


>gi|240145667|ref|ZP_04744268.1| geranyltranstransferase [Roseburia intestinalis L1-82]
 gi|257202256|gb|EEV00541.1| geranyltranstransferase [Roseburia intestinalis L1-82]
          Length = 296

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 5/201 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +   ++ A+ Y+ L GGK++R  L+ E   LF           AAIE IH YSL+HDDLP
Sbjct: 28  YQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGGKSKVIEPFMAAIEMIHTYSLVHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTH 152
           +MDN   RRGK T H+ Y E  AI+AG+ LLTYAFE  +     + ++    + +  L+ 
Sbjct: 88  AMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSA 147

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             G+ GM+GGQ +D++ E    + + ++  I ++KT AL+  +   GA++A A+ +E++ 
Sbjct: 148 KAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKI 207

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           +      +G+ FQ+ DD+LD 
Sbjct: 208 VEAVASKVGLAFQIQDDILDV 228


>gi|238022838|ref|ZP_04603264.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147]
 gi|237866041|gb|EEP67177.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147]
          Length = 295

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 120/221 (54%), Gaps = 10/221 (4%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           + +L  +L +TA   Q  H      A+RYA L GGK++R  LV   A L N         
Sbjct: 16  EAVLQQMLPETALAPQGLHE-----AMRYAALDGGKRLRPMLVLAAAELGNRVQAACEAA 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+ECIH YSL+HDD+P MDN  +RRGKPT H+ Y   TA++ G+ L T AFE++S  +
Sbjct: 71  LAAVECIHVYSLVHDDMPEMDNDTLRRGKPTCHVAYGAATALLVGDALQTLAFELLSR-Q 129

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFAC 193
           T L    + +++  L    G  GM GGQ +D+ +   D  Q  + Q   +KTGAL+  A 
Sbjct: 130 TDLPAARQLRMLNVLARASGSTGMAGGQAIDLANVGHDLPQDALEQMHSLKTGALIRAAV 189

Query: 194 ESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + GA+      +     L  +   LG+ FQ+ DD+LDC  D
Sbjct: 190 QLGALSCPDVDEAALAALDEYAAKLGLAFQVIDDVLDCAAD 230


>gi|152995175|ref|YP_001340010.1| polyprenyl synthetase [Marinomonas sp. MWYL1]
 gi|150836099|gb|ABR70075.1| Polyprenyl synthetase [Marinomonas sp. MWYL1]
          Length = 293

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/231 (41%), Positives = 138/231 (59%), Gaps = 17/231 (7%)

Query: 10  QENSKRIDTILDDLLLQ--TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           Q   +R+D  L   L Q   A+H+Q        +A+ Y+L  GGK++R  L    ASLF 
Sbjct: 8   QYARRRVDDYLTLNLGQYEPATHLQ--------NAMAYSLFNGGKRVRPMLTYAAASLFG 59

Query: 67  -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             N+LT     AAIE IH YSLIHDDLP+MD+  +RRGKPT HIQYDE TAI+AG+ L T
Sbjct: 60  EANNLTDASA-AAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQYDEATAILAGDALQT 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183
           +AFE++S+PK Q    ++ QL+  L H  G  GM+ GQM+D+ +    I+  ++  + + 
Sbjct: 119 FAFELLSNPKHQ-STKVQLQLIQELVHASGRHGMVTGQMIDLANVGNSINIDELEQMHQH 177

Query: 184 KTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  +   GAI   A S+ +   L  +   +G+ FQ+ DD++D   D
Sbjct: 178 KTGALIRASIRMGAISTGAKSEADFAALDAYAAAIGLAFQVQDDIIDITSD 228


>gi|291538771|emb|CBL11882.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
           XB6B4]
          Length = 296

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 5/201 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +   ++ A+ Y+ L GGK++R  L+ E   LF           AAIE IH YSL+HDDLP
Sbjct: 28  YQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGGRSKVIEPFMAAIEMIHTYSLVHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTH 152
           +MDN   RRGK T H+ Y E  AI+AG+ LLTYAFE  +     + ++    + +  L+ 
Sbjct: 88  AMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSA 147

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             G+ GM+GGQ +D++ E    + + ++  I ++KT AL+  +   GA++A A+ +E++ 
Sbjct: 148 KAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKI 207

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           +      +G+ FQ+ DD+LD 
Sbjct: 208 VEAVASKVGLAFQIQDDILDV 228


>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
 gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
          Length = 296

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 125/199 (62%), Gaps = 4/199 (2%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  ++ Y+L  GGK++R  +V      +  +    + VG A+E IH YSLIHDDLP M
Sbjct: 31  DSLKKSMLYSLEAGGKRLRPVVVLAILHAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCM 90

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNI 154
           D+  +RRGKPT H  + E TA++AG+GLLT +F++I+S  ++ +  + R +L+  L    
Sbjct: 91  DDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSEDVSADKRLRLVNELISAA 150

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +GM+GGQ+ D++ E   +   ++  I + KT  L+ F+  +GAI+A A +NE E LR 
Sbjct: 151 GTEGMVGGQIADMEAESKSVSLEELESIHERKTAKLLAFSVMAGAILADAPENEIETLRA 210

Query: 213 FGENLGIIFQLADDLLDCE 231
           F  ++GI FQ+ DD+LD E
Sbjct: 211 FSSHIGIGFQIRDDILDLE 229


>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
 gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
          Length = 310

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 126/230 (54%), Gaps = 12/230 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+E  K  D  LD         +   + +++  A+RY+LL GGK++R  L      
Sbjct: 19  LVAYLKERQKLCDNALD-------RAIPIIYPEKIYEAMRYSLLAGGKRVRPILCLATCE 71

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+GL
Sbjct: 72  MMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGL 131

Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           L  AFE+++      +   +  Q+++ L   +G  G++GGQ++D++ E    I    +  
Sbjct: 132 LALAFELVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLETLNF 191

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I + KT AL+     SG I+A AS  + +RL  + EN+G+ FQ+ DD+LD
Sbjct: 192 IHRHKTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILD 241


>gi|300722008|ref|YP_003711288.1| geranyltranstransferase [Xenorhabdus nematophila ATCC 19061]
 gi|297628505|emb|CBJ89072.1| geranyltranstransferase (=farnesyldiphosphate synthase)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 315

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 12/193 (6%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A+LGGK++R FLV     +F ++  +      A+ECIH YSLIHDDLP+MDN  +RRG+P
Sbjct: 56  AVLGGKRLRPFLVYSVGEMFGLSRKSLDAAALALECIHAYSLIHDDLPAMDNDDLRRGQP 115

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           T HI++ E  AI+AG+ L + AFE+++    P   L D  R  ++  L    G  GM GG
Sbjct: 116 TCHIKFGESQAILAGDALQSLAFELLAHYDMPDVALSD--RLAMVAELASASGFAGMCGG 173

Query: 163 QMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER---LRCFGENL 217
           Q LD++ E   ID   +  I + KTGAL+  A   GA    A Q  +E    L  + + +
Sbjct: 174 QSLDLEAEGKQIDLASLEQIHRHKTGALIRAAARLGAY--SAGQRGREVIPLLDQYTQAI 231

Query: 218 GIIFQLADDLLDC 230
           G+ FQ+ DD+LD 
Sbjct: 232 GLAFQVHDDILDV 244


>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
 gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
          Length = 289

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 118/206 (57%), Gaps = 12/206 (5%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +N  L  +++Y++ +GGK+IR  L+    S++  N+   + +  AIE IH YSLIHD
Sbjct: 21  KGSYNKVLYDSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIMPMACAIEMIHTYSLIHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP MDN  +RRGKPT H  + E  AI+AG+GLL  A  ++ +  +   D +       +
Sbjct: 81  DLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNVMFNY-SLTHDKVALMASKVI 139

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQ 204
           +   G +GM+GGQ++DI    I E Q   I K+      KTG L+  +  +GAI+  AS+
Sbjct: 140 SEAAGAEGMIGGQVVDI----ISEGQKISIDKLKYMHKNKTGQLIKSSIIAGAILGGASK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
              E L  FG  LG+ FQ+ DD+LD 
Sbjct: 196 ENLEILDEFGSKLGLAFQIKDDILDV 221


>gi|188990958|ref|YP_001902968.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167732718|emb|CAP50912.1| geranyltranstransferase [Xanthomonas campestris pv. campestris]
          Length = 291

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 117/199 (58%), Gaps = 9/199 (4%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+R+A+LGG K++R  LV    +LF     +      A+E IH YSL+HDDLP+MD
Sbjct: 30  RLHAAMRHAVLGGGKRMRPLLVYASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVHI +DE TAI+AG+ L   AFE+++         +R   + SL    G 
Sbjct: 90  DDALRRGRPTVHIAFDEATAILAGDALQARAFELLAEAPADAA--LRVGWLQSLASAAGA 147

Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM GGQ LDI    Q + +D  Q   +  +KTGAL+  A   G +   A   +++RL  
Sbjct: 148 AGMCGGQALDIDATGQVQALDALQ--RMHALKTGALIRAAVRMGVLTGGAGIADQQRLDA 205

Query: 213 FGENLGIIFQLADDLLDCE 231
           F + LG+ FQ+ DD+LD E
Sbjct: 206 FADALGLAFQVRDDILDVE 224


>gi|295096799|emb|CBK85889.1| farnesyl-diphosphate synthase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 299

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 13/211 (6%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   N  L+ A+ Y ALLGGK++R FLV    ++F ++  T     AA+ECIH YSLIHD
Sbjct: 25  QPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFGISDNTLDAPAAAVECIHAYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MD+  +RRG+PT HI++ E  AI+AG+ L T AF I+S +P  ++ D  R  ++  
Sbjct: 85  DLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMVEVSDRDRLAMVSE 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+ GM GGQ LD++ E    T  Q+  I + KTGAL+  A   GA+    S  E+
Sbjct: 145 LAMASGVAGMCGGQALDLEAEGRQVTLEQLERIHRHKTGALIRAAVRLGAL----SAGER 200

Query: 208 ER-----LRCFGENLGIIFQLADDLLDCEED 233
            R     L  + E++G+ FQ+ DD+LD   D
Sbjct: 201 GRKALPILDRYAESIGLAFQVQDDILDVVGD 231


>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
 gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
           [Aromatoleum aromaticum EbN1]
          Length = 298

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 4/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K+IR  LV     L         +V  A+E IH YSL+HDDLP MD
Sbjct: 34  RLHEAMRYAVLGGGKRIRPLLVHAAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPCMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPTVH++YD+ TA++ G+ L   AF+ +S        + +  ++  L    G 
Sbjct: 94  NDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSLSEHPLTEDPSEQLSMITQLARASGS 153

Query: 157 QGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCF 213
           +GM GGQ +D+    + +   ++  +   KTGAL+  +   GA   A    +  ERL  +
Sbjct: 154 RGMAGGQAIDLAAVGKQLSREELEYMHIHKTGALIRASVLLGAACGARLDSDRLERLDHY 213

Query: 214 GENLGIIFQLADDLLDCEED 233
           G+ +G++FQ+ DD+LD + D
Sbjct: 214 GKLVGLLFQVVDDILDTQSD 233


>gi|323498628|ref|ZP_08103620.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio sinaloensis DSM 21326]
 gi|323316326|gb|EGA69345.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio sinaloensis DSM 21326]
          Length = 294

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/241 (37%), Positives = 130/241 (53%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q N+ +++  L+     T  H Q      L+ A+RY LL GGK+ R FLV 
Sbjct: 1   MQEALTSLQQRNNAQLEAWLN-----TLPHQQQP----LIEAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCTLEELDTPAAAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           G+ L T AF I++    +P  Q +   R +++ +L    G  GM  GQ LD+  E  D +
Sbjct: 112 GDALQTLAFTILADGHLNPDAQAQ---RIKMVKALAEASGAAGMCMGQALDLAAENRDVS 168

Query: 176 --QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
             ++  I + KTGALM  A   GA+ A +   E    L  + + +G+ FQ+ DD+LD   
Sbjct: 169 LQELEEIHRNKTGALMKCAIRLGAMAAGSKGVEVLPLLDKYADAIGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|239582554|dbj|BAB61886.2| farnesyl diphosphate synthase [Rhodopseudomonas palustris]
          Length = 147

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 94/147 (63%), Gaps = 4/147 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +RRG+PT+H  YD+ TAI+AG+ LLT+AF+I++  +      +R  L  
Sbjct: 1   HDDLPGMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHKDPTVRLLLTR 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            L    GL GM+GGQMLD+  E  F D     V  +Q+MKTGAL+ + C +GAI+  A+ 
Sbjct: 61  VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQANA 120

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
           ++   L  +G  LG  FQ+ADD+LB E
Sbjct: 121 DQYRALDDYGRALGEAFQIADDILBVE 147


>gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 288

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 140/235 (59%), Gaps = 17/235 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN- 66
           L++ ++ I+T L +L+ +            L  A+ Y+L +GGK+IR  L+ E +   N 
Sbjct: 8   LKQKAELINTYLKNLIPKGTPK-------ELFDAMEYSLTVGGKRIRPILIIESSKAVNP 60

Query: 67  -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V+    + V  ++E IH YSLIHDDLP+MD+  +RRGKPT H  + E  AI+AG+GLLT
Sbjct: 61  DVDIEDFIDVALSVEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAGDGLLT 120

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
           YAFE+IS  +    D +  +++  +++++G+ GM+GGQ  DI + F D   +  I   KT
Sbjct: 121 YAFELISGNQKITPDKLL-KVINVISNSVGVYGMVGGQAGDILENFKD---IDFIHTHKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPKK 237
              +   C+ G I+A AS+ E E L+ +G  +GI FQ+ DD+LD    EE + KK
Sbjct: 177 AKFISGCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEEKVGKK 231


>gi|291287805|ref|YP_003504621.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 299

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 9/198 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+RY+L  GGK++R  LV     +F      A    AA+E +H YSLIHDDLP+MD+
Sbjct: 35  LVDAMRYSLFAGGKRLRPALVFSSYGVFEGYFDKATPFAAAVEMLHTYSLIHDDLPAMDD 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154
              RRGKPT H  Y E TAI+AG+GLLT AFE++ +   ++  ++    ML   + +   
Sbjct: 95  DDYRRGKPTNHKMYGEATAILAGDGLLTKAFEVMCN--AEINPDVEPAQMLEAAYKLADA 152

Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G +GM+GGQ  D+  +D   +   V  I   KT  L+ + CE GAI+   S+++K+R+R
Sbjct: 153 AGDRGMVGGQFTDMEAEDGVFNSATVDFIHMNKTSRLISYCCELGAILGFGSEDDKKRMR 212

Query: 212 CFGENLGIIFQLADDLLD 229
            +G  +G+ FQ+ DD+LD
Sbjct: 213 EYGIRIGLAFQIVDDILD 230


>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
 gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
          Length = 296

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q     R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPSVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|145636150|ref|ZP_01791820.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittHH]
 gi|145270672|gb|EDK10605.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittHH]
          Length = 296

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 135/237 (56%), Gaps = 13/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       S      N  LL A++YALL GGK++R FLV   
Sbjct: 2   GNFSEELQQVQTRINRFLEAQFEGIESR-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L ++AFEI++ +P    +  +   L+  L    G+QGM  GQ LD+  E   I  +++ 
Sbjct: 117 ALQSFAFEILTKTPNISAEQKLA--LIQILAQGAGVQGMCLGQSLDLISEHKQISLSELE 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
           +I + KTGAL+  A + G I + H +    E+ L  + E +G+ FQ+ DD+LD E D
Sbjct: 175 LIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGD 231


>gi|13431547|sp|Q43133|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
           chloroplastic/chromoplastic; Short=GGPP synthase;
           Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; Flags: Precursor
 gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
          Length = 366

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 110/196 (56%), Gaps = 7/196 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L       A+    A+E IH  SLIHDDLP MDN  +
Sbjct: 102 AMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDL 161

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGM 159
           RRGKPT H  Y E  A++AG+ LL++AFE ++S  +      R  + +  L   IG +G+
Sbjct: 162 RRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGL 221

Query: 160 LGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           + GQ++DI  E +D   V +     I   KT AL+  +   G I+   S  E ERLR F 
Sbjct: 222 VAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFA 281

Query: 215 ENLGIIFQLADDLLDC 230
             +G++FQ+ DD+LD 
Sbjct: 282 RCIGLLFQVVDDILDV 297


>gi|325917351|ref|ZP_08179568.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536438|gb|EGD08217.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937]
          Length = 287

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 119/198 (60%), Gaps = 7/198 (3%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+R+A+LGG K++R  LV    +LF            ++E IH YSL+HDDLP+MD
Sbjct: 26  RLHAAMRHAVLGGGKRMRPLLVYASGALFRAAEDLLDTPAVSVELIHAYSLVHDDLPAMD 85

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVHI +DE TAI+AG+ L T AFE+++S    +   +R   +  L    G 
Sbjct: 86  DDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAS--APVSAELRVGWLQHLASAAGA 143

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCF 213
            GM GGQ LDI D       +  +Q+M   KTGAL+  A   GA+   A+  +++R+  F
Sbjct: 144 GGMCGGQALDI-DATGQVQSLHALQRMHALKTGALIRAAVRMGALSGRAAPADQQRVDDF 202

Query: 214 GENLGIIFQLADDLLDCE 231
            + LG+ FQ+ DD+LD E
Sbjct: 203 ADALGLAFQVRDDILDVE 220


>gi|52080961|ref|YP_079752.1| polyprenyl synthetase,polyprenyl synthetase [Bacillus licheniformis
           ATCC 14580]
 gi|52786337|ref|YP_092166.1| YqiD [Bacillus licheniformis ATCC 14580]
 gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
 gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
           ATCC 14580]
 gi|52348839|gb|AAU41473.1| YqiD [Bacillus licheniformis ATCC 14580]
 gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
          Length = 296

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/188 (44%), Positives = 118/188 (62%), Gaps = 7/188 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV      +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H
Sbjct: 44  GGKRLRPILVLALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             Y E TAI+AG+ LLT +F++I+S   + +    R +L+  L    G +GM+GGQ+LD+
Sbjct: 104 KIYGEATAILAGDALLTESFKMITSNMPSDVSAEKRIRLVNELISAAGAEGMVGGQILDM 163

Query: 168 QDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           + E     +DE Q   I + KT  L+ F+  +GAI+A AS+ E E+LR F  ++GI FQ+
Sbjct: 164 EAESKSVSLDELQ--RIHEGKTAKLLSFSVIAGAILADASEKEIEKLREFSHHIGIGFQI 221

Query: 224 ADDLLDCE 231
            DD+LD E
Sbjct: 222 RDDILDLE 229


>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 372

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 8/194 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  L      L       A++   A+E IH  SLI DDLP MDN  +
Sbjct: 111 AMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDL 170

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  + E  AI++G  LL  AFE ++      K  +R  ++  L  +IG +G++
Sbjct: 171 RRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVR--VVKELAKSIGTKGLV 228

Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GQ +D+  E +D   V +     I   KTGAL+  +   GA++   S+ E E++R F  
Sbjct: 229 AGQAMDLSSEGLDPNDVGLEDLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRYFAR 288

Query: 216 NLGIIFQLADDLLD 229
            +G++FQ+ DD+LD
Sbjct: 289 CIGLLFQVVDDILD 302


>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
 gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
          Length = 366

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 12/230 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S LQ     ++  LD+ L         ++ D++  A+RY+LL GGK++R  L    + 
Sbjct: 74  LQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIAASE 126

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +        A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++AG+ 
Sbjct: 127 MIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDA 186

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179
           +L+ AFE I+     +      +++  L   +G QG++ GQ++DI     E +D   +  
Sbjct: 187 MLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDTLRY 246

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I   KTG L+  A   GAI   AS+ E  R+R + + +G++FQ+ DD+LD
Sbjct: 247 IHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILD 296


>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
           ATCC 824]
 gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
           acetobutylicum ATCC 824]
 gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
           EA 2018]
          Length = 289

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 124/202 (61%), Gaps = 6/202 (2%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +N R+  ++ Y+L  GGK++R  L+    +++N ++   + + AAIE IH YSLIHD
Sbjct: 21  KDNYNKRVYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKEVIDIAAAIEMIHTYSLIHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLS 149
           DLP MDN  +RRG+PT H  +    A++AG+GLL  A  I+      + ++ +++ LM+S
Sbjct: 81  DLPCMDNDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYCIGKGEEALKACLMIS 140

Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              +    GM+GGQ++DI  E   I+E ++  + K KTG L+  A  SGAI+  A  ++ 
Sbjct: 141 KAASS--DGMIGGQVVDILSEGKKINEDELRYMHKKKTGELIKAAVVSGAILGGAPLHDV 198

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           E L  +G+ LG+ FQ+ DD+LD
Sbjct: 199 ELLSQYGDKLGLAFQIEDDILD 220


>gi|332307431|ref|YP_004435282.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174760|gb|AEE24014.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 296

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 131/225 (58%), Gaps = 6/225 (2%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KR+   +D LL    S +  +H  RL  A++YALL GGK++R FLV        V+    
Sbjct: 8   KRVHQRVDALLQAQISDLD-EHAPRLKKAMQYALLMGGKRMRPFLVYAVGEALGVSESDL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-I 131
                AIECIH YSL+HDDLP+MD+  +RRG PT HIQ+DE  AI+AG+ L T AF+I +
Sbjct: 67  DAPALAIECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLAFDIVV 126

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALM 189
           + P +   +  R +L+  L+   G  GM GGQ +D+Q  +  I + Q+  +   KTGAL+
Sbjct: 127 NYPLSDFANQQRIELVRILSRASGYDGMCGGQGIDLQSTNTLISQRQLEQLHSKKTGALI 186

Query: 190 CFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
             A +  A ++ +  +E K  L  + + +G+ FQ+ DD+LD   D
Sbjct: 187 IAAVKMAATLSTSVSDESKALLSQYAKTIGLAFQVQDDILDVVGD 231


>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
 gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
          Length = 327

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 12/230 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S LQ     ++  LD+ L         ++ D++  A+RY+LL GGK++R  L    + 
Sbjct: 35  LQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIAASE 87

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +        A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++AG+ 
Sbjct: 88  MIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDA 147

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179
           +L+ AFE I+     +      +++  L   +G QG++ GQ++DI     E +D   +  
Sbjct: 148 MLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDMLRY 207

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I   KTG L+  A   GAI   AS+ E  R+R + + +G++FQ+ DD+LD
Sbjct: 208 IHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILD 257


>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
          Length = 382

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 5/197 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  ++RY++L GGK++R  L      L       A+ +  AIE IH  +L+HDD+P +D
Sbjct: 116 KLHESMRYSILSGGKRVRPVLCIAACELVGGTEELAMPIACAIEMIHVMTLLHDDMPCLD 175

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIG 155
           N  IRRGKPT H  + E TA+IAG  LL+ AFE I+   ++   N R   M+S L    G
Sbjct: 176 NDDIRRGKPTNHKVFGEGTALIAGVALLSVAFEHIAVSTSKTVGNDRILRMVSELGRTTG 235

Query: 156 LQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            QG++GGQ LD+    D  ++   +  I   KT  L+  +   GAI+  AS++E ER+R 
Sbjct: 236 SQGIMGGQFLDLVSEGDASVNLQTLQWIHAHKTAVLLESSVVCGAIIGGASEDEIERIRR 295

Query: 213 FGENLGIIFQLADDLLD 229
           +   +GI+FQ+ DD+LD
Sbjct: 296 YASCVGILFQVVDDILD 312


>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
 gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
          Length = 289

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 130/219 (59%), Gaps = 10/219 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++ L      +  +N  +  A++Y++ +GGK+IR  L+    +++  N+   + +  AIE
Sbjct: 11  NVWLNNYFENKGSYNKIVYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKDIMPMACAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLL  A  I+ +    L +
Sbjct: 71  MIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFN--YSLNN 128

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACES 195
           +IR+ +    ++   G++GM+GGQ++DI  E     ID  +   + K KTG L+     +
Sbjct: 129 DIRALKASKIISEASGVEGMIGGQVVDIISEGKKITIDNLKY--MHKNKTGKLIKSPIIA 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           GAI+ +A + + + L  FGE LG+ FQ+ DD+LD   D+
Sbjct: 187 GAILGNAPKEDIDILEEFGEKLGLAFQIKDDILDVIGDV 225


>gi|225430848|ref|XP_002273789.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 368

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 4/192 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++RY+LL GGK++R  L      L   +  TA+    A+E IH  SL+HDDLP MDN  +
Sbjct: 107 SMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDL 166

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  + E  AI+AG+ LL +AFE +++    +      + +  L  +IG +G++
Sbjct: 167 RRGKPTNHKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLV 226

Query: 161 GGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ++DI  E + +     +  I   KT AL+  A   GAI+   S  E E+LR F   +
Sbjct: 227 AGQVVDICSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCI 286

Query: 218 GIIFQLADDLLD 229
           G++FQ+ DD+LD
Sbjct: 287 GLLFQVVDDILD 298


>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
 gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
          Length = 296

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  IGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 229


>gi|32265833|ref|NP_859865.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449]
 gi|32261882|gb|AAP76931.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449]
          Length = 288

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/190 (42%), Positives = 112/190 (58%), Gaps = 15/190 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK+ R  LV  C     VN L       A     +IECIH YSLIHDDLP MDN  +RR
Sbjct: 39  GGKRFRPALVF-CV----VNALAPQLIKNAFLPALSIECIHTYSLIHDDLPCMDNAPLRR 93

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  T+H +YDE  A++ G+GL TYAF ++S  + +L   +R +L+ SL  N G+ GM+ G
Sbjct: 94  GHATLHTKYDETLALLVGDGLNTYAFALLS--QARLDAQVRLELIHSLALNAGIGGMVLG 151

Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           QMLD   +D+ +   ++ +I   KT  L+  + + GAI+++A  +    +  FG  LGI 
Sbjct: 152 QMLDCAFEDKKLSLQELQIIHTNKTAKLIATSLQFGAIISNAKAHFASSIYEFGLKLGIY 211

Query: 221 FQLADDLLDC 230
           FQL DDL+D 
Sbjct: 212 FQLRDDLIDA 221


>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
          Length = 308

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK++R  L      L   +  TA+    A+E IH  SL+HDDLP MD
Sbjct: 43  KVHESMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMD 102

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E  AI+AG+ LL +AFE +++    +      + +  L  +IG 
Sbjct: 103 NDDLRRGKPTNHKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGS 162

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + +     +  I   KT AL+  A   GAI+   S  E E+LR F
Sbjct: 163 EGLVAGQVVDICSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKF 222

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 223 ARCIGLLFQVVDDILD 238


>gi|54308001|ref|YP_129021.1| putative geranyltranstransferase [Photobacterium profundum SS9]
 gi|46912427|emb|CAG19219.1| putative geranyltranstransferase [Photobacterium profundum SS9]
          Length = 300

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 5/200 (2%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+  ++Y  LLGGK+ R FL      +            AA+ECIH YSLIHDDLP+MD+
Sbjct: 36  LVKTMKYGTLLGGKRARPFLTYITGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDD 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGL 156
             +RRG PT HI +DE  AI+AG+ L T AFEI++  K     N  R  ++  L    G 
Sbjct: 96  DELRRGHPTCHIAFDEALAILAGDALQTLAFEILADGKLNDDGNTQRIAMIKELAQASGA 155

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213
            GM  GQ LD++ E   +D  Q+  I K KTGAL+  A   GA+ A         +L  F
Sbjct: 156 AGMCVGQALDLEAEGKHVDLQQLETIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLNQF 215

Query: 214 GENLGIIFQLADDLLDCEED 233
            + +G+ FQ+ DD+LD   D
Sbjct: 216 ADAIGLAFQVQDDILDVTSD 235


>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
 gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
          Length = 296

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
 gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
          Length = 296

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
           29176]
 gi|197299223|gb|EDY33753.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
           29176]
          Length = 296

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 10/222 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           ++I+ IL   L +   + +T     ++ A+ Y+L+ GGK++R  L+ E   LF       
Sbjct: 12  EKIEKILKKYLPEKKGYQRT-----IMEAMEYSLMAGGKRLRPMLMWESYRLFGGEGAAI 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
               AAIE IH YSL+HDDLP+MDN   RRG+ T HI Y E   I+AG+ LL YAFE   
Sbjct: 67  EPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAC 126

Query: 132 SSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGAL 188
            + + + +  +R  + +  L    G+ GM+GGQ++D+Q+  + +    +  I ++KT AL
Sbjct: 127 RAFEEESEHALRIGKALKILADKAGIYGMIGGQVVDVQESGKAVSGEVLDFIYRLKTSAL 186

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +  +  +GA++A A + +  R+      +G+ FQ+ DD+LD 
Sbjct: 187 IEASMMAGAVLAGAEEGQVSRMEQIAGKIGLAFQIQDDILDV 228


>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
           subsp. sativus]
          Length = 365

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 117/201 (58%), Gaps = 4/201 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   ++  ++RY+LL GGK++R  L      LF  +   A+    A+E IH  SL+HDDL
Sbjct: 96  QEPVKIHESMRYSLLAGGKRVRPILSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDL 155

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  Y E  A++AG+ +L  AF ++++  + +  +   ++++ L  
Sbjct: 156 PFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAFHLVATETSGVSSSQVVRVIVELAK 215

Query: 153 NIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            IG +G++ GQ++D+    D  +    +  I + KT AL+  +   GAI+  A+  E E+
Sbjct: 216 AIGAEGLVAGQIVDVCSEGDPNLGLKDLEFIHRSKTAALLEGSVVMGAILGGANDEEVEK 275

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           +R +   +G++FQ+ DD+LD 
Sbjct: 276 VRKYARCIGLLFQVVDDILDV 296


>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 359

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 127/224 (56%), Gaps = 10/224 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + E ++R++  LDD        +  +H  ++  A+RY+LL GGK++R  L      L   
Sbjct: 73  MAEMAERVNQALDD-------SVPLRHPLKIHEAMRYSLLAGGKRVRPILCIASCELVGG 125

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           + + A  +  A+E IH  SLIHDDLP MDN   RRG PT H  + E TA++AG+ LL+ A
Sbjct: 126 DPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGDALLSLA 185

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
           FE +++  T +  +   +++  L   +G  G++GGQ++DI    + I+ +++  I   KT
Sbjct: 186 FEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEYIHLHKT 245

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L+  +   GAIM      + ERLR +   +G++FQ+ DD+LD
Sbjct: 246 AILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILD 289


>gi|255994613|ref|ZP_05427748.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
 gi|255993326|gb|EEU03415.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
          Length = 297

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 20/233 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLS----------AIRYALL-GGKKIRSFLVTECASLFNVN 68
           +DD+  +    + T+  + LLS          A+ Y+L  GGK++R  L+ E A     +
Sbjct: 1   MDDMFYKYKHDIDTKMREILLSKEEIAKPLREAMEYSLYAGGKRVRPVLLMEAARAVGGD 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             + L   AAIE IH YSLIHDDLP++D+   RRGK T H  + E  AI+AG+GL   A+
Sbjct: 61  PGSVLDYAAAIEFIHTYSLIHDDLPALDDDEYRRGKKTNHKVFGEAMAILAGDGLQALAY 120

Query: 129 EIISS---PKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK- 182
           E++ S       + D I  ++  +  +    G + M+ GQ++DI +   D+  + M++K 
Sbjct: 121 EVMLSCIAKSDNMGDEILKKIKAANEIVMAAGTEAMVSGQVMDI-NSCSDKDSLTMLEKM 179

Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             MKTGAL+  A   GAI+A A + +    R +GEN+G+ FQ+ DD LD   D
Sbjct: 180 HRMKTGALITAAVVVGAILAGADERQVAAFRKYGENIGLAFQMVDDKLDVSGD 232


>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
 gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
 gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
 gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
 gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
 gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
 gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
 gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
 gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
 gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
          Length = 296

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
 gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
          Length = 299

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 130/239 (54%), Gaps = 15/239 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+    + LQ     I+  L DLL       + Q  + L  A+RYA+L GGK+IR  LV 
Sbjct: 5   MSENFNAWLQSVQSAIEKSLSDLLPS-----EKQFPEPLHQAMRYAVLDGGKRIRPLLVF 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LF        +  +A+E IH YSLIHDD+P MDN  +RRGKPT+H+Q+ E  A++A
Sbjct: 60  ATGALFGAPVAVMTQTASAVEMIHAYSLIHDDMPCMDNDVLRRGKPTLHVQFGEAMALLA 119

Query: 120 GNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           G+ L   AF ++S    ++ D+ +  ++ +  L+   G  GM GGQ +D+    + +   
Sbjct: 120 GDALQAQAFIVLS----KIDDDAKLVAERLRILSEASGSLGMCGGQAIDLDSVGKNLSID 175

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
           Q+  + ++KTGAL+  +   GA  A     E+   L  + + +G+ FQ+ DD+LD   D
Sbjct: 176 QLEQMHRLKTGALLKASVMLGAFSAKRPDPEEITALDAYAKAIGLAFQVVDDILDVTAD 234


>gi|56695165|ref|YP_165512.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
 gi|56676902|gb|AAV93568.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
          Length = 288

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 8/199 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+ +   GGK++R FLV E A L +V+   A+    AIE +H YSL+HDDLP MD+  +R
Sbjct: 32  AMAWTTEGGKRLRGFLVLESARLHDVDEARAIWPATAIEALHAYSLVHDDLPCMDDDDLR 91

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PT H+++DE TA++AG+ L + AFE+ + P+    +  R+ L L+L    G +GM+ 
Sbjct: 92  RGRPTAHVKWDEGTAVLAGDALHSLAFELCTRPEVGTAET-RATLALTLAQAAGARGMVL 150

Query: 162 GQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ LDI  E   +     Q+  +Q  KTGAL+ +A  +    A  +  + + LR +   L
Sbjct: 151 GQALDIAAETAPKPLTLDQITRLQAGKTGALIEWAAAA---GAVLAGADPDPLRQYARAL 207

Query: 218 GIIFQLADDLLDCEEDLPK 236
           G+ FQ+ADD+LD E D  K
Sbjct: 208 GLAFQIADDILDVEGDAEK 226


>gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
 gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
          Length = 296

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 11/201 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
            ++ A+ Y+LL GGK++R  L+ E   LF  +        AAIE IH YSL+HDDLP+MD
Sbjct: 31  EIMEAMEYSLLAGGKRLRPMLMRETYVLFGGDEELIEPFMAAIEMIHTYSLVHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLSLT 151
           N   RRG+ T H+ Y E   I+AG+ LL +AFE         P+  ++     Q M  L+
Sbjct: 91  NDDYRRGRKTTHVVYGEAMGILAGDALLNFAFETAVKAFAMCPQKSIEIG---QAMRILS 147

Query: 152 HNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G+ GM+GGQ++D++   + + +  +  I ++KT AL+  A   GA++A AS+ E ++
Sbjct: 148 EKAGIYGMIGGQVVDVKSAGQAVSKEVLDFIYELKTSALIECAMMIGAVLAGASETEVQK 207

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           +    + +G+ FQ+ DD+LD 
Sbjct: 208 IEQIAKYVGVAFQIQDDILDV 228


>gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
 gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
          Length = 296

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 115/194 (59%), Gaps = 4/194 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY +L GGK++R  LV         +   ALR   A+E IH YSL+HDD+P MDN  +
Sbjct: 37  AMRYGVLDGGKRLRPLLVMAACEALGGSREAALRSACAVELIHAYSLVHDDMPCMDNDVL 96

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH++Y E  A++AG+ +   AFEI+ +P   ++  +++ L+  L    G  GM 
Sbjct: 97  RRGKPTVHVKYGEAQAMLAGDAMQALAFEIL-TPDEGVEPALQASLVRLLARAAGHAGMA 155

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ +D+ +    +DE  +  + + KTGAL+  + + GA     +    + L  +GE +G
Sbjct: 156 GGQAIDLANTGRLLDEATLREMHRKKTGALLLVSVQMGAACGSPAPATWQALSEYGEAIG 215

Query: 219 IIFQLADDLLDCEE 232
           + FQ+ DD+LDC +
Sbjct: 216 LAFQVVDDILDCTQ 229


>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
 gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
          Length = 296

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 229


>gi|322382773|ref|ZP_08056617.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153242|gb|EFX45688.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 298

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 129/241 (53%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G + + LQ  +++++  L+  L      +Q +    L  ++ Y+L+ GGK+IR  LV   
Sbjct: 2   GSIQAYLQTRARQVEEALEGSL-----PVQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
              F +     + V  AIE IH YSLIHDDLP+MDN   RRGKPT H ++ E  AI+AG+
Sbjct: 57  VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQ--DEFIDET 175
            LLT+AF  ++    Q      ++ +L++   I    G +GM+GGQ  D+Q         
Sbjct: 117 ALLTHAFYSVTQAARQ--GGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLE 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++  I   KT  L+  +  +GAI+A A + +   L  FG  +G+ FQ+ DD+LD   D  
Sbjct: 175 ELEYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEA 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|167464892|ref|ZP_02329981.1| Polyprenyl synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 303

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 129/241 (53%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G + + LQ  +++++  L+  L      +Q +    L  ++ Y+L+ GGK+IR  LV   
Sbjct: 7   GSIQAYLQTRARQVEEALEGSL-----PVQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
              F +     + V  AIE IH YSLIHDDLP+MDN   RRGKPT H ++ E  AI+AG+
Sbjct: 62  VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQ--DEFIDET 175
            LLT+AF  ++    Q      ++ +L++   I    G +GM+GGQ  D+Q         
Sbjct: 122 ALLTHAFYSVTQAARQ--GGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLE 179

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++  I   KT  L+  +  +GAI+A A + +   L  FG  +G+ FQ+ DD+LD   D  
Sbjct: 180 ELEYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEA 239

Query: 236 K 236
           K
Sbjct: 240 K 240


>gi|146310549|ref|YP_001175623.1| geranyltranstransferase [Enterobacter sp. 638]
 gi|145317425|gb|ABP59572.1| farnesyl-diphosphate synthase [Enterobacter sp. 638]
          Length = 299

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/207 (41%), Positives = 127/207 (61%), Gaps = 5/207 (2%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   N  L++A+ Y ALLGGK++R FLV    ++F ++  T     AA+ECIH YSLIHD
Sbjct: 25  QPFQNTPLVAAMHYGALLGGKRLRPFLVYATGNMFGISSNTLDAPAAAVECIHAYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           DLP+MD+  +RRG+PT HI++ E  AI+AG+ L T AF I+S +P  ++ D  R  ++  
Sbjct: 85  DLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMIEVADRDRLAMVSE 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+ GM GGQ LD++ E   ++  Q+  I + KTGAL+  A   GA+ A    ++ 
Sbjct: 145 LAMASGVAGMCGGQALDLEAEGHQVNLEQLERIHRHKTGALIRAAVRLGALSAGERGSKA 204

Query: 208 -ERLRCFGENLGIIFQLADDLLDCEED 233
              L  + E++G+ FQ+ DD+LD   D
Sbjct: 205 LPILDRYAESIGLAFQVQDDILDVVGD 231


>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
 gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
          Length = 317

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 125/226 (55%), Gaps = 14/226 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L    + ++  LDD        +  +  + L  A+RY+LL GGK++R  L      L   
Sbjct: 26  LGSQKQLVEAALDD-------SLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGG 78

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ LLT A
Sbjct: 79  DPALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 138

Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           FE++S  SP    +  ++    LSL    G  G++GGQ++D++ E   +D   +  I   
Sbjct: 139 FEMVSLRSPGVPAERLLKVVAELSLVA--GAPGLVGGQVVDLECEGKDVDLDTLEYIHLH 196

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTGAL+     +GA++  A + + + LR +   +G+ FQ+ DD+LD
Sbjct: 197 KTGALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILD 242


>gi|152990006|ref|YP_001355728.1| geranyltranstransferase [Nitratiruptor sp. SB155-2]
 gi|151421867|dbj|BAF69371.1| geranyltranstransferase [Nitratiruptor sp. SB155-2]
          Length = 290

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 126/215 (58%), Gaps = 7/215 (3%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76
           + +D L +   H+Q+ H      A+ Y L  GGK+ R  L+       N   + +AL V 
Sbjct: 6   LFEDHLQKNLPHVQSFH-PFYTDALGYMLQAGGKRFRPLLLLSIVQAKNPLLIPSALDVA 64

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H YSLIHDDLP MD+  +RRGK T+H +YDE+TA++ G+ L TYAF  I+  K+
Sbjct: 65  MAIEIFHTYSLIHDDLPVMDDADLRRGKETLHKKYDELTAVLVGDALNTYAFYCIA--KS 122

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACE 194
            L  + R++L   L  N G++GM+ GQ+LD   +++ +   Q+  +   KT  L+  + +
Sbjct: 123 ALSSDTRAKLTEILAQNGGIEGMVHGQILDCYFENQKLSLEQLQQLHINKTAKLIAASLQ 182

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GA++      E+ RL  FG +LG++FQ+ DD++D
Sbjct: 183 MGAVIVDLPFIEQNRLYNFGIDLGLLFQIQDDIID 217


>gi|254509029|ref|ZP_05121134.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
 gi|219548064|gb|EED25084.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
          Length = 294

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 130/241 (53%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q ++++++  LD     T  H Q      L+ A+RY LL GGK+ R FLV 
Sbjct: 1   MQEALTSLQQRSNQQLERWLD-----TLPHQQQP----LIDAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +   +        AAIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGSSLEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173
           G+ L T AF I++    SP+ + +   R  ++  L    G  GM  GQ LD+  ++  + 
Sbjct: 112 GDALQTLAFTILAEGQLSPEAEAQ---RIMMVKVLAEASGAAGMCMGQALDLAAENRIVS 168

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
             ++  I + KTGALM  A   GA+ A     E    L  + + +G+ FQ+ DD+LD   
Sbjct: 169 LQELEEIHRNKTGALMKCAIRMGALAAGEKGIEVLPLLDKYADAIGLAFQVQDDILDVIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 300

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 125/225 (55%), Gaps = 10/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L +   RI++ LD       + +  +  ++L  A+RY+LL GGK++R  L      L   
Sbjct: 15  LAKARTRIESALD-------ASLGPERPNQLREAMRYSLLAGGKRLRPILCLAACELTGS 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+    AIE IH  SLIHDDLPSMDN  +RRG+PT H  Y E  AI+AG+ LLT A
Sbjct: 68  DSENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGDALLTRA 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FE+++     +  +   +++  L+   G  G++GGQ+ D++ E   +D   +  I   KT
Sbjct: 128 FEMVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEFIHIHKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           GAL+  +   GA++  A ++    L  + + +G+ FQ+ DD+LD 
Sbjct: 188 GALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDV 232


>gi|260767267|ref|ZP_05876208.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           furnissii CIP 102972]
 gi|260617775|gb|EEX42953.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           furnissii CIP 102972]
 gi|315180898|gb|ADT87812.1| geranyltranstransferase [Vibrio furnissii NCTC 11218]
          Length = 294

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 14/235 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S    N++++D  L+ L            N  L+ A+RY LL GGK+ R +LV    
Sbjct: 4   ALSSFQHRNNEQLDLWLNRL---------PNQNLPLIEAMRYGLLLGGKRARPYLVYITG 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +            +AIECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ G+ 
Sbjct: 55  QMLGCEPSDLDTPASAIECIHAYSLIHDDLPAMDDDELRRGKPTCHIKFDEATAILTGDA 114

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AF I++    +   +  R +++ +L    G QGM  GQ LD+  ++  +   ++  
Sbjct: 115 LQTLAFTILAEGTLSDAGEMNRVKMIQALAEASGAQGMCLGQALDLAAENRLVALDELEN 174

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I + KTGALM  A   GA+ A H   +    L  + + +G+ FQ+ DD+LD   D
Sbjct: 175 IHRNKTGALMRCAIRMGAMAAGHKGLDVLPHLDRYADAVGLAFQVQDDILDIISD 229


>gi|325205345|gb|ADZ00798.1| geranyltranstransferase [Neisseria meningitidis M04-240196]
          Length = 298

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L         +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E TA++ G+ L T AF++++ P + L  + +  ++  L    G +GM 
Sbjct: 99  RRGKPTCHIKYGEATALLVGDALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMA 157

Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +      Q  + Q   +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 299

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 10/224 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L++  K I+  LD         +  ++ + L  ++RY+LL GGK+IR  L     SL   
Sbjct: 14  LKQTKKVIEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 66

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+    AIE IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ LLT A
Sbjct: 67  EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S     +  N    ++  L+   G  G++GGQ++D++ E   +D   +  I   KT
Sbjct: 127 FEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYIHLHKT 186

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GAL+     +GA++A A++   + L  + E +G+ FQ+ DD+LD
Sbjct: 187 GALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILD 230


>gi|254671578|emb|CBA09234.1| geranyltranstransferase [Neisseria meningitidis alpha153]
          Length = 298

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L         +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGGTVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E TA++ G+ L T AF++++ P + L  + +  ++  L    G +GM 
Sbjct: 99  RRGKPTCHIKYGEATALLVGDALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMA 157

Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +      Q  + Q   +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|312862780|ref|ZP_07723020.1| geranyltranstransferase [Streptococcus vestibularis F0396]
 gi|322516632|ref|ZP_08069546.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124]
 gi|311101640|gb|EFQ59843.1| geranyltranstransferase [Streptococcus vestibularis F0396]
 gi|322124902|gb|EFX96326.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124]
          Length = 290

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 6/200 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L++AI Y++  GGK+IR  +  +    F +    +   V A++E IH  SLIHDDLP+MD
Sbjct: 26  LITAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSHFDVAASLEMIHTGSLIHDDLPAMD 85

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG+ T H ++DE TAI+AG+ L    F +++  +T+L   IR QL+ +L++  G 
Sbjct: 86  NDDYRRGRLTNHKKFDEATAILAGDSLFLDPFALVA--QTELSAEIRVQLIQALSYASGT 143

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQMLD++ E   +D +Q+  I + KTG L+ F   +  I++       E L+  G
Sbjct: 144 FGMVGGQMLDMKGEDLELDLSQLAKIHENKTGKLLTFPFVAAGIVSQQEDRVMENLKEAG 203

Query: 215 ENLGIIFQLADDLLDCEEDL 234
             +G+ FQ+ DD+LD   D 
Sbjct: 204 RLIGLAFQVRDDILDVTADF 223


>gi|311693472|gb|ADP96345.1| geranyltranstransferase [marine bacterium HP15]
          Length = 298

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 11/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L+    R+D  LD  + + ++      + RL  A+RY++LGG K+IR  L    A     
Sbjct: 12  LETCRARVDAELDRCITRDSA------SGRLQEAMRYSVLGGGKRIRPALCLAAAKAMGQ 65

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL    ++E IH YSLIHDDLP+MD+  +RRG+PT HI +DE TAI+AG+ L   A
Sbjct: 66  TGDEALIPACSVELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQALA 125

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
           F  ++     L +++R  ++  L    G  GM+GGQ +D++   + +   Q+  + + KT
Sbjct: 126 FGWLAE-APGLSESVRLIMVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKT 184

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ A +   +    L  + + LG+ FQ+ DDLLD E D
Sbjct: 185 GALIETSVRIGALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGD 233


>gi|315125809|ref|YP_004067812.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas sp. SM9913]
 gi|315014323|gb|ADT67661.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas sp. SM9913]
          Length = 295

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + ++ +  A  Y+++ GGK++R FLV     +   +      + AAIECIH YSL+HDDL
Sbjct: 27  ESDNTIKEATHYSVMNGGKRLRPFLVYTTGKILGADKRDLDVLAAAIECIHSYSLVHDDL 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MD+  +RRG+PT HI Y E  AI+AG+ L T AFE+I+    +     + +++ +L H
Sbjct: 87  PAMDDDDLRRGRPTCHIVYGEAQAILAGDALQTLAFELIAKHTFKCSTEAQLKMIAALAH 146

Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             GLQGM+ GQ  DI   D+ I   ++  I K+KTGAL+  A   GA+ A + SQ   + 
Sbjct: 147 ASGLQGMVAGQGRDIAATDKVITVDELERIHKLKTGALINCAITLGALCAPNTSQQTLDN 206

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  FG  +G+ FQ+ DD+LD E D
Sbjct: 207 LSTFGYAIGLAFQVHDDILDVEGD 230


>gi|257455692|ref|ZP_05620921.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60]
 gi|257446975|gb|EEV21989.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60]
          Length = 319

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 15/202 (7%)

Query: 45  YALL-GGKKIRSFLVTEC-------ASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLP 93
           YA+  GGK++R  LV           SL N +H  +    R   A+EC+H YSL+HDDLP
Sbjct: 55  YAMTNGGKRVRPLLVAATFATVKTDNSLANPSHQLSNDVRRAMMAVECLHGYSLVHDDLP 114

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MD+  +RRG+PT HI Y E  A++AG+ L T AFE ++   T   +N      LS T  
Sbjct: 115 CMDDDALRRGRPTTHIAYGEAAAMLAGDVLQTLAFEALT--HTYFGENSEFATPLSATFA 172

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
              + M+ GQMLD+  E   + +T++  I + KTGAL+  +   GAI A+A+ +E++ L 
Sbjct: 173 PRARRMVMGQMLDLNGEHQQLSQTELEAIHRDKTGALIEASVLMGAICANATDSERQALS 232

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            F + +G+ FQ+ DD+LD   D
Sbjct: 233 SFAQQIGLAFQVQDDILDVTAD 254


>gi|241894940|ref|ZP_04782236.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
 gi|241871658|gb|EER75409.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
          Length = 290

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 133/223 (59%), Gaps = 14/223 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           +I+  L++ L ++AS  + Q       A+RYA++ GGK++R  L       + +     L
Sbjct: 13  QIEHTLENELAKSASVAELQE------AMRYAVMAGGKRLRPMLSLAVIQTYGLPVNEYL 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +V +AIE IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+ L   AFE ++ 
Sbjct: 67  KVASAIELIHTYSLIHDDLPAMDDDELRRGKPTTHRAFGEDTAILAGDALQPLAFEWLTD 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGAL 188
               L D  R QL++++    G  GM+ GQ+LDI+        + ETQ   I   KTGAL
Sbjct: 127 LDQPLNDAQRVQLVIAMAQAAGGAGMVAGQVLDIEAMKTSAVTLAETQA--IHYHKTGAL 184

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + +A ++GAIMA+A+++ +  L  FG   G+ FQ+ DD+ D +
Sbjct: 185 IAYALQAGAIMANANEDIQNILHDFGMAYGLAFQIKDDIDDYQ 227


>gi|62959201|gb|AAY23708.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-310]
          Length = 145

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 94/145 (64%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +R GKPT+H  +DE TA++AG+ L   AF+I++ P T     +R++L+ 
Sbjct: 1   HDDLPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60

Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G  GM GGQM+DI  +++  D  QV  +Q++KTGAL+  + E GA++   +   
Sbjct: 61  TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +  LR +  ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145


>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
 gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
          Length = 309

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 11/203 (5%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +++  ++RY+LL GGK++R  L    + +       A+    A+E IH  SLIHDDLP
Sbjct: 41  YPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGTIEIAMPTACAVEMIHTMSLIHDDLP 100

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLT 151
           +MDN   RRG  T H  Y E  AI+AG+GLL YAFE ++  +P++  +D +  Q++  L 
Sbjct: 101 AMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAFEFVAIRTPESVPRDRVL-QVVARLG 159

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALM--CFACESGAIMAHASQNE 206
             +G  G++GGQ++D+  E   +T    +  I   KT AL+  C  C  G I+A AS   
Sbjct: 160 RALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHKTAALLEACVVC--GGILAGASSEN 217

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            +RL  + +N+G+ FQ+ DD+LD
Sbjct: 218 VQRLSRYSQNIGLAFQIIDDILD 240


>gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
           M50/1]
          Length = 296

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 5/201 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +   ++ A+ Y+ L GGK++R  L+ E   LF           AAIE IH YSL+HDDLP
Sbjct: 28  YQKTVIEAMNYSFLAGGKRLRPILMLETYRLFGGKSKVIEPFMAAIEMIHTYSLVHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTH 152
           +MDN   RRGK T H+ Y E  AI+AG+ LLTYAFE  +     + ++    + +  L+ 
Sbjct: 88  AMDNDEYRRGKKTTHVVYGEAMAILAGDALLTYAFETAAKALDIEPQNPGIGKAIRILSA 147

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             G+ GM+GGQ +D++ E    + + ++  I ++KT AL+  +   GA++A A+ +E++ 
Sbjct: 148 KAGIYGMVGGQTVDVESENTCDMTKEKLDFIYRLKTSALIEASMMIGAVLAGATGSEQKI 207

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           +      +G+ FQ+ DD+LD 
Sbjct: 208 VEEVASKVGLAFQIQDDILDV 228


>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 372

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 114/199 (57%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q+  ++  A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDL
Sbjct: 104 QNPVKIHDAMRYSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAMEMIHTMSLIHDDL 163

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E TAI+AG+ LL+++FE ++     +  +   + +  L  
Sbjct: 164 PCMDNDDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVARSTKNVSPDRVVRAIAELGS 223

Query: 153 NIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G +G++ GQ++DI  E  D   + +  I   KT  L+  +   GAI+  A     ER+
Sbjct: 224 AVGSEGLVAGQIVDIDSEGKDVSVSDLEYIHIHKTAKLLEASVVCGAILGGADDESVERV 283

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +   +G++FQ+ DD+LD
Sbjct: 284 RKYARCIGLLFQVVDDILD 302


>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
          Length = 371

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 114/196 (58%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK+IR  L      L   +  TA+    A+E +H  SL+HDDLP MD
Sbjct: 106 KIQESMRYSLLAGGKRIRPMLCIAACELVGGDESTAMPAACAVEMVHTMSLMHDDLPCMD 165

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E  A++AG+ +L ++FE ++S    +      +++  L   +G 
Sbjct: 166 NDDLRRGKPTNHKVFTEDVAVLAGDAMLAFSFEHVASLTKGVCSERIVRVIYELAKCVGC 225

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E +DE     +  I   KT AL+  +   GAI+   S  E E+LR F
Sbjct: 226 EGLVAGQVVDICSEGMDEVGLEHLEFIHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNF 285

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 286 ARCIGLLFQVVDDILD 301


>gi|54295170|ref|YP_127585.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
 gi|53755002|emb|CAH16490.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
          Length = 298

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 14/199 (7%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           SA+ YAL  GGK+IR  LV     L +V+      + AA+E  HCYSLIHDDLP+MDN  
Sbjct: 33  SALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDIIAAALELTHCYSLIHDDLPAMDNDD 92

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----G 155
           +RRGKP+ H  +DE TAI+ G+G+   A E++     +L   + +  ++++T  +    G
Sbjct: 93  LRRGKPSCHKAFDEATAILVGDGMQALAIEVV---LMRLSPLLPAAQVVAITQVLVNASG 149

Query: 156 LQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERL 210
           + GM+ GQ LD+ +     + E Q+  I  +KTG L+  AC    + A    S+  K  L
Sbjct: 150 ISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLI-LACFEMVLAAQHEVSEQIKSAL 208

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +G+++G++FQ+ DD LD
Sbjct: 209 RTYGKHIGLVFQMQDDYLD 227


>gi|218282379|ref|ZP_03488661.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989]
 gi|218216665|gb|EEC90203.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989]
          Length = 280

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 9/205 (4%)

Query: 31  MQTQHND--RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           ++ Q ND  R   A+ Y+L+ GGK++R  L+      + ++         AIE IH YSL
Sbjct: 11  VRVQENDDSRTKDAMAYSLMNGGKRVRPMLLFSVLEGYGMDAHVGYPCACAIEMIHTYSL 70

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDDLP+MDN  +RRGKP+ H  YDE TAI+AG+GLLT AFE++   +   K  +   L+
Sbjct: 71  VHDDLPAMDNDDLRRGKPSCHKAYDEATAILAGDGLLTKAFEVVLDSECSAKQKV--ALV 128

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
            +L+   G+ GM+ GQ LD+Q E        ++Q++   KT  L+      G I+A+   
Sbjct: 129 KALSWYAGIDGMIYGQTLDLQAENDTNPTFALLQEIDHYKTSKLLTLPLVCGCILANKF- 187

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
           ++ +  R  G  LG+ FQ+ DD+LD
Sbjct: 188 DDIDHFRKIGLVLGLEFQMQDDILD 212


>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
          Length = 365

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 4/205 (1%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S +  +  +++  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SL
Sbjct: 91  SAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGGHESMAMPAACAVEMIHTMSL 150

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP MDN  +RRGKPT H  + E  A++AG+ LL +AFE I+     +      + +
Sbjct: 151 IHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFAFEHIAVSTVGVSTARIVRSI 210

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQ 204
             L  +IG +G++ GQ++DI  E + +    Q+  I   KT AL+  +   GAI+   S 
Sbjct: 211 GELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHKTAALLEASVVLGAILGGGSD 270

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
            E E+LR F   +G++FQ+ DD+LD
Sbjct: 271 IEIEKLRMFARYIGLLFQVVDDILD 295


>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
          Length = 383

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 5/201 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ +++  A+RY+LL GGK+IR  L      L   +   A+    A+E IH  SLIHDDL
Sbjct: 113 RYPEKIHEAMRYSLLAGGKRIRPILTIAACELVGGSEELAMPTACAMEMIHTMSLIHDDL 172

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLT 151
           PSMDN  +RRGK T H  + E TA++AG+ LL++AFE I+ S +  +  +   +++  L 
Sbjct: 173 PSMDNDDLRRGKLTNHKVFGEGTAVLAGDALLSFAFEHIAVSTRKTVASHRVLRVVSELG 232

Query: 152 HNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             IG QG+ GGQ+ DI    D  +    +  I   KT  L+  A  SGAI+  AS+NE E
Sbjct: 233 KAIGSQGVAGGQVADITSEGDPSVGLETLEWIHIHKTAVLLECAVVSGAIIGGASENEIE 292

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           R   +   +G++FQ+ DD+LD
Sbjct: 293 RTGRYARCVGLLFQVVDDILD 313


>gi|90579835|ref|ZP_01235643.1| putative geranyltranstransferase [Vibrio angustum S14]
 gi|90438720|gb|EAS63903.1| putative geranyltranstransferase [Vibrio angustum S14]
          Length = 300

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 121/217 (55%), Gaps = 15/217 (6%)

Query: 28  ASHMQTQ--HNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           A+ + TQ   +  LL A++Y  LLGGK+ R FL      +  V         AA+ECIH 
Sbjct: 23  ANWLSTQPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVECIHA 82

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLP+MD+  +RRG+PT HI +DE  AI+AG+ L T AF+I+++ +     N + 
Sbjct: 83  YSLIHDDLPAMDDDALRRGQPTCHIAFDEAIAILAGDALQTLAFDILANGQLSQDGNTQR 142

Query: 145 QLMLS-LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAH 201
             M+S L    G  GM  GQ LD+  E   +   Q+ +I + KTGAL+  A   GA+ A 
Sbjct: 143 IAMVSELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAA- 201

Query: 202 ASQNEK-----ERLRCFGENLGIIFQLADDLLDCEED 233
               +K      +L  + E +G+ FQ+ DD+LD   D
Sbjct: 202 ---GDKGVAILPQLDKYAEAIGLAFQVQDDILDVISD 235


>gi|218710368|ref|YP_002417989.1| geranyltranstransferase [Vibrio splendidus LGP32]
 gi|218323387|emb|CAV19564.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
           splendidus LGP32]
          Length = 294

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  L++A+RY LL GGK+ R FLV     +            +AIECIH YSLIHDDLP
Sbjct: 26  QNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTH 152
           +MD+  +RRG  T HI+YDE TAI+ G+ L T AF I++        ++ R +++  L  
Sbjct: 86  AMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRMIQRLAE 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209
             G QGM  GQ LDI+ E    T  ++  + + KTGALM  A   GA+ A     E   +
Sbjct: 146 ASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQ 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + + +G+ FQ+ DD+LD   D
Sbjct: 206 LDKYADAIGLAFQVQDDILDIISD 229


>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 295

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 7/204 (3%)

Query: 35  HNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           ++ +++ ++ Y+LLGG K++R  L  E   LF+++    L +   +E IH YSLIHDDLP
Sbjct: 28  YSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLNIACVLEMIHTYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLT 151
           +MDN  +RRGKPT HI Y E  AI+AG+ LL  ++E++     K    +NI +  ++S  
Sbjct: 88  AMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEVLFDFLYKNSSPNNILACRLIS-- 145

Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            N G+ GM+GGQ+ D+  +++ ID   +  I   KT  L+  +  S A ++  S+     
Sbjct: 146 KNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMASILSAAYISDCSKEYITY 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +  N+G+ FQ++DD+LD   D
Sbjct: 206 LESYAYNIGMAFQISDDILDVVGD 229


>gi|84394354|ref|ZP_00993075.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01]
 gi|84375013|gb|EAP91939.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01]
          Length = 294

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  L++A+RY LL GGK+ R FLV     +            +AIECIH YSLIHDDLP
Sbjct: 26  QNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTH 152
           +MD+  +RRG  T HI+YDE TAI+ G+ L T AF I++        ++ R +++  L  
Sbjct: 86  AMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRMIQRLAE 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209
             G QGM  GQ LDI+ E    T  ++  + + KTGALM  A   GA+ A     E   +
Sbjct: 146 ASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQ 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + + +G+ FQ+ DD+LD   D
Sbjct: 206 LDKYADAIGLAFQVQDDILDIISD 229


>gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO]
 gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
 gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
 gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
 gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
 gi|258615761|ref|ZP_05713531.1| geranyltranstransferase [Enterococcus faecium DO]
 gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68]
 gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6]
 gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
 gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039]
 gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162]
 gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071]
 gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636]
 gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679]
 gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317]
 gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
 gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C]
 gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082]
 gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A]
 gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B]
 gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
 gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO]
 gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
 gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
 gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
 gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
 gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68]
 gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6]
 gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
 gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071]
 gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636]
 gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679]
 gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317]
 gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039]
 gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162]
 gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
 gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B]
 gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A]
 gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C]
 gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
 gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082]
          Length = 296

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 29  SHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCY 85
           S +     DR L  A+ Y++  GGK+IR  L+ T  AS      +   +V AA+E +H Y
Sbjct: 20  SFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTY 79

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS     L ++ +  
Sbjct: 80  SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGNSPKLL 137

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  +G I+A   
Sbjct: 138 LLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQP 197

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
           +     L+   E+LG+ FQ+ DDLLD 
Sbjct: 198 EEILLLLQRLAEHLGLAFQIRDDLLDV 224


>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
 gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
 gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
 gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
 gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
 gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
 gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
 gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
          Length = 296

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I+++A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|307611173|emb|CBX00817.1| hypothetical protein LPW_25211 [Legionella pneumophila 130b]
          Length = 298

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 14/199 (7%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           SA+ YAL  GGK+IR  LV     L +V+      + AA+E  HCYSLIHDDLP+MDN  
Sbjct: 33  SALHYALFSGGKRIRPILVYLAGDLIDVDQEVLDIIAAALELTHCYSLIHDDLPAMDNDD 92

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----G 155
           +RRGKP+ H  +DE TAI+ G+G+   A E++     +L   + +  ++++T  +    G
Sbjct: 93  LRRGKPSCHKAFDEATAILVGDGMQALAIEVV---LMRLSPLLPAAQVVAITQVLVNASG 149

Query: 156 LQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERL 210
           + GM+ GQ LD+ +     + E Q+  I  +KTG L+  AC    + A    S+  K  L
Sbjct: 150 ISGMVSGQSLDLSELAKSSVTEEQLRGIHLLKTGKLI-LACFEMVLAAQHEVSEQIKSAL 208

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +G+++G++FQ+ DD LD
Sbjct: 209 RTYGKHIGLVFQMQDDYLD 227


>gi|229823205|ref|ZP_04449274.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271]
 gi|229787371|gb|EEP23485.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271]
          Length = 297

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 119/197 (60%), Gaps = 5/197 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSM 95
           RL+ A+RY+L  GGK++R  ++    ++ + + +   L+   A+E IH YSLIHDDLP+M
Sbjct: 29  RLIEAMRYSLKNGGKRLRPVMLLAVLAIQSEDLVKCGLKTAIALEYIHTYSLIHDDLPAM 88

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+ T H ++ E  AI+AG+ LLT AF+ + S    L D  +  L+  L+   G
Sbjct: 89  DNDDLRRGQATNHKRFGEGLAILAGDALLTDAFQFLVSDDL-LDDRTKLALIDQLSQASG 147

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+ GQ+ DI+ E   +D   +  I   KTGAL  FA E+GAI+  A  +  + LR F
Sbjct: 148 SWGMVAGQVGDIEAEQTPVDYQGLKQIHDQKTGALFRFALEAGAIIGGADASTCQALRQF 207

Query: 214 GENLGIIFQLADDLLDC 230
           G + G+ +Q+ +DL+D 
Sbjct: 208 GRHFGLAYQIHNDLMDV 224


>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
          Length = 361

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 114/195 (58%), Gaps = 3/195 (1%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK++R  L      L   + LTA+    A+E IH  SL+HDDLP MD
Sbjct: 97  KIHESMRYSLLAGGKRVRPVLCIAACELVGGDGLTAMPAACAVEMIHTMSLMHDDLPCMD 156

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT H+ Y E  A++ G+ +L++AFE +++    +  +   + +  L   IG 
Sbjct: 157 NDDFRRGKPTNHMVYGEEIAVLGGDAMLSFAFEHMATATKGVSSDRILRAIGELAKCIGS 216

Query: 157 QGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++DI  E  D     +  I   KT AL+  +   GAI+   S  E E+LR F 
Sbjct: 217 EGLVAGQVVDICSEGADVGLEHLEFIHLHKTAALLEGSVVLGAILGGGSDGEIEKLRKFA 276

Query: 215 ENLGIIFQLADDLLD 229
            ++G++FQ+ DD+LD
Sbjct: 277 RSIGLLFQVVDDILD 291


>gi|86147429|ref|ZP_01065741.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222]
 gi|85834722|gb|EAQ52868.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222]
          Length = 294

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  L++A+RY LL GGK+ R FLV     +            +AIECIH YSLIHDDLP
Sbjct: 26  QNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAIECIHAYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTH 152
           +MD+  +RRG  T HI+YDE TAI+ G+ L T AF I++        ++ R +++  L  
Sbjct: 86  AMDDDELRRGHQTCHIKYDEATAILTGDALQTLAFTILAEGTLSADGESNRVRMIQRLAE 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209
             G QGM  GQ LDI+ E    T  ++  + + KTGALM  A   GA+ A     E   +
Sbjct: 146 ASGAQGMCIGQALDIEAENRSVTLEELEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQ 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + + +G+ FQ+ DD+LD   D
Sbjct: 206 LDKYADAIGLAFQVQDDILDIISD 229


>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
 gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
 gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
          Length = 377

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 117/203 (57%), Gaps = 4/203 (1%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +Q +   ++  ++RY+LL GGK++R  L      L   +  TA+    A+E IH  SL+H
Sbjct: 105 VQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMH 164

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP MDN  +RRGKPT H+ + E  A++AG+ LL++AFE +++           +++  
Sbjct: 165 DDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGE 224

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           L  +IG +G++ GQ++D+  E + E     +  I   KT AL+  +   GAI+    + E
Sbjct: 225 LAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEE 284

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
             +LR F   +G++FQ+ DD+LD
Sbjct: 285 VAKLRKFANCIGLLFQVVDDILD 307


>gi|307265160|ref|ZP_07546719.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919782|gb|EFN49997.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 294

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 12/209 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+RY++  GGK++R  L      L   +   AL V  AIE IH YSLIHDDLP+MDN
Sbjct: 30  IYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154
             +RRGKPT H  Y E  AI+AG+GLL   +E++     +  ++   + +L  T+ I   
Sbjct: 90  DDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDY--ERILKATNEIATA 147

Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G +G++GGQ++DI  Q+  +   ++  + + KTGAL+  +  +GA +A A++ E   LR
Sbjct: 148 SGCKGIIGGQVVDILSQNTELTYEELKFMHEHKTGALIEASVCAGAYIASATEEEIHALR 207

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            +   +G  FQ+ DD+LD    EE L KK
Sbjct: 208 EYARLIGFAFQIKDDILDVIGEEEKLGKK 236


>gi|16763803|ref|NP_459418.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56414422|ref|YP_151497.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161615389|ref|YP_001589354.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167551766|ref|ZP_02345519.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167992273|ref|ZP_02573371.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168232396|ref|ZP_02657454.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237536|ref|ZP_02662594.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168261144|ref|ZP_02683117.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168465513|ref|ZP_02699395.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194471326|ref|ZP_03077310.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194737792|ref|YP_002113456.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197248755|ref|YP_002145405.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264786|ref|ZP_03164860.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197363342|ref|YP_002142979.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198246235|ref|YP_002214377.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204927283|ref|ZP_03218485.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|224582261|ref|YP_002636059.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911444|ref|ZP_04655281.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|16418928|gb|AAL19377.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56128679|gb|AAV78185.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161364753|gb|ABX68521.1| hypothetical protein SPAB_03160 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194457690|gb|EDX46529.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194713294|gb|ACF92515.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195631861|gb|EDX50381.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197094819|emb|CAR60352.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197212458|gb|ACH49855.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243041|gb|EDY25661.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289586|gb|EDY28949.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197940751|gb|ACH78084.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204323948|gb|EDZ09143.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323424|gb|EDZ11263.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205329490|gb|EDZ16254.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205333490|gb|EDZ20254.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205349921|gb|EDZ36552.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|224466788|gb|ACN44618.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245706|emb|CBG23502.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992135|gb|ACY87020.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157034|emb|CBW16517.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911456|dbj|BAJ35430.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225151|gb|EFX50212.1| Geranyltranstransferase farnesyldiphosphate synthase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322614703|gb|EFY11632.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618809|gb|EFY15697.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623516|gb|EFY20355.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629186|gb|EFY25965.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631906|gb|EFY28660.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637357|gb|EFY34059.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642042|gb|EFY38652.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647861|gb|EFY44336.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322652539|gb|EFY48893.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653299|gb|EFY49632.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660552|gb|EFY56788.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664704|gb|EFY60897.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669243|gb|EFY65393.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670788|gb|EFY66921.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678973|gb|EFY75028.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682001|gb|EFY78026.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685170|gb|EFY81167.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323128742|gb|ADX16172.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323194482|gb|EFZ79677.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196981|gb|EFZ82123.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323203966|gb|EFZ88983.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323206949|gb|EFZ91902.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210833|gb|EFZ95705.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214524|gb|EFZ99275.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223081|gb|EGA07424.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323227030|gb|EGA11211.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230152|gb|EGA14272.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233890|gb|EGA17979.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238416|gb|EGA22474.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244104|gb|EGA28113.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323246264|gb|EGA30247.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323251890|gb|EGA35753.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323257887|gb|EGA41566.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261100|gb|EGA44692.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264970|gb|EGA48469.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272533|gb|EGA55940.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326622125|gb|EGE28470.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332987371|gb|AEF06354.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 299

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELAN 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231


>gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
 gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
          Length = 296

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 29  SHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCY 85
           S +     DR L  A+ Y++  GGK+IR  L+ T  AS      +   +V AA+E +H Y
Sbjct: 20  SFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTY 79

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS     L ++ +  
Sbjct: 80  SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGNSPKLL 137

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  +G I+A   
Sbjct: 138 LLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQP 197

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
           +     L+   E+LG+ FQ+ DDLLD 
Sbjct: 198 EEIILLLQRLAEHLGLAFQIRDDLLDV 224


>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 300

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 3/202 (1%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +  ++ + L  ++RY+LL GGK+IR  L     SL       A+    AIE IH  SLIH
Sbjct: 30  LGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIH 89

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MDN   RRG+PT H  Y +  AI+AG+ LLT AFE++S     +  N    ++  
Sbjct: 90  DDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDSNRLLNVVGE 149

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+   G  G++GGQ++D++ E   +D   +  I   KTGAL+  +  +GA++A A++   
Sbjct: 150 LSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKASVRTGAMIAGANEELL 209

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
             L  + E +G+ FQ+ DD+LD
Sbjct: 210 NALTTYAEGIGLAFQIIDDILD 231


>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
          Length = 364

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 127/245 (51%), Gaps = 19/245 (7%)

Query: 4   GLPSKLQENSKRIDTILDD-------LLLQTASHMQTQHNDRLL--------SAIRYALL 48
           G+ + L     R+ T  DD        +++ A+H+    +D +          A+RY+LL
Sbjct: 50  GVSAVLTGEEARVSTQRDDAPFNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLL 109

Query: 49  -GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L      +       A+    A+E IH  SLIHDDLP MDN  +RRGKPT 
Sbjct: 110 AGGKRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 169

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  + E  A++AG+ LL +AFE +++  T +        +  L   IG +G++ GQ++D+
Sbjct: 170 HKVFGEDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDL 229

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D  +    +  I   KT AL+  +   GAI+   S ++ E+LR F   +G++FQ+ 
Sbjct: 230 NCTGDANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVV 289

Query: 225 DDLLD 229
           DD+LD
Sbjct: 290 DDILD 294


>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
           23K]
          Length = 290

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 112/196 (57%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L  ++ Y+++ GGK++R  L+     S       TA R   A+E IH YSLIHDDLP+MD
Sbjct: 31  LQKSMTYSVMAGGKRLRPLLLFAVLESTGQSIDETAFRAAGALELIHSYSLIHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT H  + E  AI+AG+GLLT AFE +++     +  I  +L+  L    G 
Sbjct: 91  NDDLRRGQPTNHKVFGEAEAILAGDGLLTLAFEWLATLNVTAEQRI--ELVRLLAQAAGA 148

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQ+ DI+ E    T  Q+  +  +KTG L+  A   GA++A   + E   LR F 
Sbjct: 149 NGMVAGQIEDIEGEHKTLTLAQLQQVHHLKTGCLIEVAVAMGAVLAQLGEVETTALRGFA 208

Query: 215 ENLGIIFQLADDLLDC 230
           +  G+ FQ+ DD+LD 
Sbjct: 209 QQFGLAFQIQDDILDV 224


>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 371

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 8/196 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+LL GGK++R  L      L      TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 106 AMSYSLLAGGKRVRPVLCIAACELVGGEESTAMPARCAVEMIHTMSLIHDDLPCMDNDDL 165

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLSLTHNIGLQG 158
           RRGKPT H  + E  A++AG+ LL+++FE + S+  + +   +R  + +  L   IG +G
Sbjct: 166 RRGKPTNHKVFGEDVAVLAGDALLSFSFEHLASATSSDVVSPVRVVRAVGELAKAIGTEG 225

Query: 159 MLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           ++ GQ++DI  E +D   V +     I   KT AL+  +   GAI+   S +E ERLR F
Sbjct: 226 LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKF 285

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 286 ARCIGLLFQVVDDILD 301


>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 296

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D+  E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMDAEGKRLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|168240246|ref|ZP_02665178.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194445849|ref|YP_002039665.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450485|ref|YP_002044458.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|200390075|ref|ZP_03216686.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|194404512|gb|ACF64734.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408789|gb|ACF69008.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|199602520|gb|EDZ01066.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205339956|gb|EDZ26720.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 299

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVTDRDRIAMIAELAN 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231


>gi|168818966|ref|ZP_02830966.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205344074|gb|EDZ30838.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320084699|emb|CBY94490.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 299

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELAN 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDHYAESIGLAFQVQDDILDVVGD 231


>gi|16759400|ref|NP_455017.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142828|ref|NP_806170.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213052895|ref|ZP_03345773.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213427858|ref|ZP_03360608.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213586122|ref|ZP_03367948.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213613222|ref|ZP_03371048.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647259|ref|ZP_03377312.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213855375|ref|ZP_03383615.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289825066|ref|ZP_06544418.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25315864|pir||AG0554 geranyltranstransferase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501691|emb|CAD08879.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138460|gb|AAO70030.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 299

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELAN 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231


>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium
 gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium
 gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp
 gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp
 gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
 gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
 gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (Ii)
 gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (Ii)
 gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
          Length = 295

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 117/203 (57%), Gaps = 4/203 (1%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +Q +   ++  ++RY+LL GGK++R  L      L   +  TA+    A+E IH  SL+H
Sbjct: 23  VQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMH 82

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP MDN  +RRGKPT H+ + E  A++AG+ LL++AFE +++           +++  
Sbjct: 83  DDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGE 142

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           L  +IG +G++ GQ++D+  E + E     +  I   KT AL+  +   GAI+    + E
Sbjct: 143 LAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEE 202

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
             +LR F   +G++FQ+ DD+LD
Sbjct: 203 VAKLRKFANCIGLLFQVVDDILD 225


>gi|307720223|ref|YP_003891363.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294]
 gi|306978316|gb|ADN08351.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294]
          Length = 283

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 6/185 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L+      +N   L + R  A A+E +H YSLIHDDLP+MD+  +RRGKPT+
Sbjct: 33  GGKRFRPALLLGVVKAYNPLMLESARHAALAVEFLHTYSLIHDDLPAMDDSPLRRGKPTL 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H+ +DEVTAI+ G+ L TY+FE++++      D  R +L+  L  N GL GM+ GQ +D 
Sbjct: 93  HVSFDEVTAILVGDALNTYSFEVLAN--APFSDETRVKLIRELASNGGLNGMVLGQAIDC 150

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +++ +    +  +   KT  L+  + + GA++     +  ++L  FG  LG++FQ+ D
Sbjct: 151 YFENKPLAVEDIKTLHTNKTAKLIAASLKMGALIV-GRDDAADKLYDFGIKLGLLFQIQD 209

Query: 226 DLLDC 230
           D+LD 
Sbjct: 210 DILDV 214


>gi|229916250|ref|YP_002884896.1| polyprenyl synthetase [Exiguobacterium sp. AT1b]
 gi|229467679|gb|ACQ69451.1| Polyprenyl synthetase [Exiguobacterium sp. AT1b]
          Length = 292

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 13/209 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+ Y+L  GGK+IR  LV      + ++      V A++E +H YSLIHDDLP+MD
Sbjct: 30  RLRDAMAYSLEAGGKRIRPALVYAVLETYGMSLERGREVAASLEMVHTYSLIHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT H Q+DE TAI+AG+ LLT AF I++       D +    +  L    G 
Sbjct: 90  DDDLRRGRPTNHRQFDEATAILAGDALLTDAFRILTQMPLSALDIVEIIRIFGLA--AGS 147

Query: 157 QGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            GM+GGQ+ D+      D  ++E Q   I + KTGAL+ +A E+GAI+A AS  ++  L+
Sbjct: 148 SGMVGGQLDDMLAEKRNDVTLEELQS--IHERKTGALLVYALEAGAILAGASVEDRMHLK 205

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            FG +LGI FQ+ DD+LD    EE + K+
Sbjct: 206 QFGRHLGIAFQIQDDILDVVGDEETIGKR 234


>gi|255022132|ref|ZP_05294135.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254968396|gb|EET25955.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 304

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 14/227 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
           Q   +RI+ +LD+LL   A  +      RL  A+RY+ LGG K++R  LV        + 
Sbjct: 15  QRRVERIEKVLDELL-PPADILPG----RLHEAMRYSTLGGGKRVRPLLVYAGGQCLGLA 69

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                R  AA+E IH YSL+HDDLP+MDN  +RRG+PT H  +DE TAI+ G+ LLT+AF
Sbjct: 70  DELLDRAAAALEMIHAYSLVHDDLPAMDNDDMRRGRPTCHKAFDEATAILVGDALLTHAF 129

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTG 186
           ++++ P   L    +  + L L    G +GM+GGQ +D+     +  Q  + Q    KTG
Sbjct: 130 QVLAEPVPGLAPAQQLAMALDLARAAGSRGMVGGQAIDLAAVGHELAQPALEQMHLQKTG 189

Query: 187 ALM-C---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            L+ C      ++ AI   AS      L  + + +G+ FQ+ DD+LD
Sbjct: 190 MLIRCALQLPLQAAAIAPDASVASA--LLRYADRIGLAFQVQDDILD 234


>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha haplocalyx
           var. piperascens]
          Length = 377

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 4/203 (1%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +Q +   ++  ++RY+LL GGK++R  L      L   +  TA+    A+E IH  SL+H
Sbjct: 105 VQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMH 164

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP MDN  +RRGKPT H+ + E  A++AG+ LL++AFE +++           +++  
Sbjct: 165 DDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGE 224

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           L  ++G +G++ GQ++D+  E + E     +  I   KT AL+  +   GAI+   ++ E
Sbjct: 225 LAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGNEEE 284

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
             +LR F   +G++FQ+ DD+LD
Sbjct: 285 VAKLRKFANCIGLLFQVVDDILD 307


>gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 296

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I+++A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|28378303|ref|NP_785195.1| geranyltranstransferase [Lactobacillus plantarum WCFS1]
 gi|254556510|ref|YP_003062927.1| geranyltranstransferase [Lactobacillus plantarum JDM1]
 gi|28271138|emb|CAD64043.1| geranyltranstransferase [Lactobacillus plantarum WCFS1]
 gi|254045437|gb|ACT62230.1| geranyltranstransferase [Lactobacillus plantarum JDM1]
          Length = 296

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L  A+RY++L GGK++R  L       F++    A LR   A+E +H YSLIHDDLP+MD
Sbjct: 34  LTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT H+++ E  AI+AG+ L    FE I+   + L  +I +   L+L    G 
Sbjct: 94  NDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGP 151

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+ GQ+ D+    + +    +  + + KTGAL+ +A ++G I A      +E L  + 
Sbjct: 152 RGMVAGQVADVLGAGQHLALPALQQLHREKTGALIHYAVQAGLIQAQVQPTVQELLLQYA 211

Query: 215 ENLGIIFQLADDLLDC 230
           +  G+ FQ+ DD+LD 
Sbjct: 212 DAYGLAFQIYDDILDV 227


>gi|62959187|gb|AAY23701.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-316]
          Length = 145

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 94/145 (64%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MD+  +R GKPT+H  +DE TA++AG+ L   AF+I++ P T     +R++L+ 
Sbjct: 1   HDDMPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60

Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G  GM GGQM+DI  +++  D  QV  +Q++KTGAL+  + E GA++   +   
Sbjct: 61  TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +  LR +  ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145


>gi|161504393|ref|YP_001571505.1| geranyltranstransferase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865740|gb|ABX22363.1| hypothetical protein SARI_02504 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 299

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDVPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELAN 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLAAEGHQISLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231


>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115928|ref|YP_004186087.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 294

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 12/209 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+RY++  GGK++R  L      L   +   AL V  AIE IH YSLIHDDLP+MDN
Sbjct: 30  IYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154
             +RRGKPT H  Y E  AI+AG+GLL   +E++     +  ++   + +L  T+ I   
Sbjct: 90  DDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDY--ERILKATNEIATA 147

Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G +G++GGQ++DI  Q+  +   ++  + + KTGAL+  +  +GA +A A++ E   LR
Sbjct: 148 SGCKGIIGGQVVDILSQNTELTYEELKFMHEHKTGALIEASVCAGAYIAGATEEEIHALR 207

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            +   +G  FQ+ DD+LD    EE L KK
Sbjct: 208 EYARLIGFAFQIKDDILDVIGEEEKLGKK 236


>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 300

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 125/224 (55%), Gaps = 10/224 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E  K ++  LD         +  ++ + L  ++RY+LL GGK+IR  L     SL   
Sbjct: 15  LKETKKIVEEALD-------LSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGG 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+    AIE IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ LLT A
Sbjct: 68  EPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRA 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S     +  N    ++  L+   G  G++GGQ++D++ E   +D   +  I   KT
Sbjct: 128 FEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GAL+     +GA++A A+    + L  + E +G+ FQ+ DD+LD
Sbjct: 188 GALLKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILD 231


>gi|270157822|ref|ZP_06186479.1| geranyltranstransferase [Legionella longbeachae D-4968]
 gi|289163911|ref|YP_003454049.1| geranyltranstransferase [Legionella longbeachae NSW150]
 gi|269989847|gb|EEZ96101.1| geranyltranstransferase [Legionella longbeachae D-4968]
 gi|288857084|emb|CBJ10899.1| geranyltranstransferase [Legionella longbeachae NSW150]
          Length = 293

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 7/195 (3%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           SAI Y+L  GGK+IR  LV    SL +V+      + AA+E  HCYSLIHDDLP+MDN  
Sbjct: 29  SAIDYSLFPGGKRIRPILVYLTGSLLDVDLNILDAIAAAVELTHCYSLIHDDLPAMDNDD 88

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQ 157
           +RRG+P+ H  +DE TAI+AG+G+   A +++ +  P     D I S +   L    G+ 
Sbjct: 89  LRRGRPSCHKAFDEATAILAGDGMQALAIDVLLTYLPHLVQPDRIIS-ITRELVQATGIS 147

Query: 158 GMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           GM+ GQ LD+ +     ID+ ++  I  +KTG L+    E    +    +  +  LR + 
Sbjct: 148 GMVSGQSLDLSELAKSSIDDERLKEIHHLKTGRLILACIEMVLRIQSTPEAYQSALRTYA 207

Query: 215 ENLGIIFQLADDLLD 229
            ++G++FQ+ DD LD
Sbjct: 208 NHIGLVFQMQDDYLD 222


>gi|52842540|ref|YP_096339.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52629651|gb|AAU28392.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 309

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 14/199 (7%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           SA+ YAL  GGK+IR  LV     L +V+      + AA+E  HCYSLIHDDLP+MDN  
Sbjct: 44  SALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDD 103

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----G 155
           +RRGKP+ H  +DE TAI+ G+G+   A E++     +L   + +  ++++T  +    G
Sbjct: 104 LRRGKPSCHKAFDEATAILVGDGMQALAIEVL---LMRLSPLLPAAQVVAITQVLVNASG 160

Query: 156 LQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERL 210
           + GM+ GQ LD+ +     + E Q+  I  +KTG L+  AC    + A    S+  K  L
Sbjct: 161 ISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLI-LACFEMVLAAQHEVSEQIKSAL 219

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +G+++G++FQ+ DD LD
Sbjct: 220 RTYGKHIGLVFQMQDDYLD 238


>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 297

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 121/197 (61%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y+L  GGK++R  L+      F       +    A+E IH YSLIHDDLP MD+
Sbjct: 34  LRDAMTYSLEAGGKRLRPLLLFATLHAFGKERELGIGAACALEMIHTYSLIHDDLPCMDD 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRGKPT H  + E  A++AG+GLLTYAF+++S+   + +   I+ +L L L    G 
Sbjct: 94  DDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVVSAYNYEGISSEIKLRLALELAKAAGP 153

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+ GQ+ D++ E   +   ++  I K KTG L+ FA  +GAI+A A++ E+E+L  F 
Sbjct: 154 EGMVAGQVADMEAEGKHLTLNELEYIHKHKTGRLLEFAVLAGAILAGATKEEEEKLLAFA 213

Query: 215 ENLGIIFQLADDLLDCE 231
           + +G+ FQ+ DD+LD E
Sbjct: 214 KYVGLAFQIRDDILDVE 230


>gi|288965921|pdb|3LOM|A Chain A, Crystal Structure Of Geranyltransferase From Legionella
           Pneumophila
 gi|288965922|pdb|3LOM|B Chain B, Crystal Structure Of Geranyltransferase From Legionella
           Pneumophila
          Length = 313

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 14/199 (7%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           SA+ YAL  GGK+IR  LV     L +V+      + AA+E  HCYSLIHDDLP+MDN  
Sbjct: 40  SALHYALFSGGKRIRPILVYLAGDLIDVDQGVLDIIAAALELTHCYSLIHDDLPAMDNDD 99

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----G 155
           +RRGKP+ H  +DE TAI+ G+G+   A E++     +L   + +  ++++T  +    G
Sbjct: 100 LRRGKPSCHKAFDEATAILVGDGMQALAIEVL---LMRLSPLLPAAQVVAITQVLVNASG 156

Query: 156 LQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERL 210
           + GM+ GQ LD+ +     + E Q+  I  +KTG L+  AC    + A    S+  K  L
Sbjct: 157 ISGMVSGQSLDLSELAKSSVTEEQLREIHLLKTGKLI-LACFEMVLAAQHEVSEQIKSAL 215

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +G+++G++FQ+ DD LD
Sbjct: 216 RTYGKHIGLVFQMQDDYLD 234


>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
 gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
 gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
          Length = 296

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F+      
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 133 SPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           + +  ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYRQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
 gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
 gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
          Length = 296

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 4/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  L         V+        +A+E IH YSL+HDDLPSMD
Sbjct: 32  RLHEAMRYAVLGGGKRLRPLLTYSAGIALGVSEAVLDAPASAVELIHAYSLVHDDLPSMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG PT H  + E TA++AG+ L   AF  ++ P + +    +  ++  L    G 
Sbjct: 92  NDSLRRGHPTCHKAFGETTALLAGDALQALAFRTLAEPTSAIPAKNQINMLELLAEAAGS 151

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAI-MAHASQNEKERLRCF 213
           +GM GGQ +D+    +  T  ++  + ++KTGAL+  +   GA      +Q+  E L  F
Sbjct: 152 RGMAGGQAIDLDSVGVQLTLSEMETMHRLKTGALIRASVLLGAWCHPEITQDTLENLDRF 211

Query: 214 GENLGIIFQLADDLLDCEED 233
            + +G+ FQ+ DD+LD E D
Sbjct: 212 AQCIGLAFQIQDDVLDVESD 231


>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
 gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
          Length = 297

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 16/205 (7%)

Query: 37  DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL  A+RY++LGG K++R  L      L   +      V AA+E IH YSL+HDDLP M
Sbjct: 32  ERLHKAMRYSVLGGGKRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLPCM 91

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------PKTQLKDNIRSQLMLS 149
           D+  +RRGKPT H++YDE TA++ G+ L T AFE+++       P+TQL      Q++  
Sbjct: 92  DDDILRRGKPTCHVEYDEATALLTGDSLQTLAFELLAEKPLADIPETQL------QMIAQ 145

Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G +GM GGQ  D+    + +   ++  +   KTGAL+  A   GA  +    +E+
Sbjct: 146 LALASGSRGMAGGQAFDLDSVGKMLSLPELEFMHIHKTGALIRAAVMLGARCSSCLNDEQ 205

Query: 208 -ERLRCFGENLGIIFQLADDLLDCE 231
             +L  F + +G+ FQ+ DDLLD E
Sbjct: 206 LAQLDHFAKCVGLAFQVVDDLLDTE 230


>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
 gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
 gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
 gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
          Length = 296

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F+      
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKKLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|319957682|ref|YP_004168945.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511]
 gi|319420086|gb|ADV47196.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511]
          Length = 294

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 122/216 (56%), Gaps = 9/216 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL---VTECASLFNVNHLTALRVG 76
            ++ L Q    + T H D   +     L GGK+ R  L   + E  +   V   +A+   
Sbjct: 4   FENFLTQNLPVVDTFHPDYNEALRAMVLAGGKRFRPRLLLGIVEAYAPLLVE--SAMTPA 61

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E  H YSLIHDDLP+MD+  +RRG+PT+H ++DE  AI+AG+ L T+AFE++S  ++
Sbjct: 62  LALEIFHTYSLIHDDLPAMDDADLRRGEPTLHTRFDEALAILAGDALNTHAFEMLS--RS 119

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACE 194
             + ++R +L+  L  N G  GM+ GQ +D++ E   +   QV  +   KT  L+  A E
Sbjct: 120 AFRADVRIELVRILAENGGSGGMVLGQAIDLEFEKSPLSLEQVVELHTNKTAKLIAAALE 179

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            GA++    +  +  L  FG +LG++FQ+ DD+LD 
Sbjct: 180 MGAVIVDLPKETRRALYRFGIDLGLLFQVQDDILDA 215


>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
 gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
          Length = 320

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 11/229 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L+E  + +D  L+         +   + +++  A+RY+L+ GGK++R  L      
Sbjct: 30  LVSYLKERQQWVDAALE-------QSISVTYPEKIYQAMRYSLMAGGKRLRPILCLATCE 82

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+GL
Sbjct: 83  MTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGL 142

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MI 180
           L YAFE ++     +      +++  L H +   G++GGQ++D++ E + +  V     I
Sbjct: 143 LAYAFEYVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLNFI 202

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTGAL+  +   GA +  AS    ++L  +  N+G+ FQ+ DD+LD
Sbjct: 203 HAHKTGALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLD 251


>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
 gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
 gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
 gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
           str. A2012]
 gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
           Hakam]
 gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
 gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
 gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
 gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
 gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
 gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I]
 gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
 gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
 gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
 gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
 gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
 gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
 gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
 gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
 gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
 gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
 gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
 gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus anthracis CI]
 gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
 gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
 gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
 gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
           Hakam]
 gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
 gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
 gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
 gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
 gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
 gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I]
 gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
 gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
 gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
 gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
 gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
 gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
 gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
 gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
          Length = 296

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F+      
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
 gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
          Length = 300

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 114/204 (55%), Gaps = 13/204 (6%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL A++Y  LLGGK+ R FL      +  +         AA+ECIH YSLIHDDLP+MD+
Sbjct: 36  LLKAMQYGTLLGGKRARPFLTYVTGEMLGLTQDDLDTPAAAVECIHAYSLIHDDLPAMDD 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156
              RRG+PT HI +DE  AI+AG+ L T AF+I++S +     N +   M+S L    G 
Sbjct: 96  DAFRRGQPTCHIAFDEAMAILAGDALQTLAFDILASGQLSQDGNTQRIAMVSELAKASGA 155

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-----ER 209
            GM  GQ LD+  E   +   Q+ +I + KTGAL+  A   GA+ A     +K      +
Sbjct: 156 AGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAA----GDKGVAILPQ 211

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E +G+ FQ+ DD+LD   D
Sbjct: 212 LDKYSEAIGLAFQVQDDILDVISD 235


>gi|259417470|ref|ZP_05741389.1| geranyltranstransferase [Silicibacter sp. TrichCH4B]
 gi|259346376|gb|EEW58190.1| geranyltranstransferase [Silicibacter sp. TrichCH4B]
          Length = 287

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 137/237 (57%), Gaps = 19/237 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M  G  + L +   +I   ++  L QT         D L  A+ YAL GGK +R FLV E
Sbjct: 1   MTAGFTAALSQAQAKISIHMEHRLPQT---------DLLHQAMLYALRGGKMLRGFLVLE 51

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L +V    AL    AIECIH YSL+HDDLP MD+  +RRG+PT+H ++DE TA++AG
Sbjct: 52  SARLHDVPETAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTLHRKWDEATAVLAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----Q 176
           + L T AFE+++  + ++  +  S L+ ++    G  GM+ GQMLDI  E  +      Q
Sbjct: 112 DSLQTLAFELLA--REEVGPHAIS-LIRTMAEAAGKDGMVSGQMLDIAAETAEAPLTLEQ 168

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +Q  KTG L+ ++  +GA +A A   +   LR + + LG+ FQ+ADD+LD E D
Sbjct: 169 ITTLQARKTGCLIEWSACAGARLAGA---DPAPLRHYAQALGLAFQIADDILDIEGD 222


>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
 gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
 gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
 gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
 gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 296

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
          Length = 302

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 139/233 (59%), Gaps = 13/233 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQ-----TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +S+++ TIL +   Q  +++Q          RL  A+ Y+LL GGK++R  L    A+LF
Sbjct: 6   DSQQVKTILAERGAQVEAYLQHCLDAIPMQGRLKEAMYYSLLAGGKRLRPVLCLSTAALF 65

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            ++    +   A++E IH YSLIHDDLP+MD+  +RRG+P+ H  +DE TAI+AG+ LLT
Sbjct: 66  GLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGRPSCHKAFDEATAILAGDALLT 125

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----I 180
            AF  ++S    L      + + S++   G  GM+GGQ+LD+  +   +T V +     +
Sbjct: 126 DAFGFMASTVKDLPAGRVLEALASVSSAAGSAGMVGGQILDM--DCTGKTNVPLETLQTL 183

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +KTGA+   AC SG ++A AS+++   LR +GE LG+ FQ+ DD+LD   D
Sbjct: 184 HALKTGAMFRVACVSGGLLAGASESDIASLRAYGEALGVTFQIVDDILDETAD 236


>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
 gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
          Length = 300

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 116/205 (56%), Gaps = 3/205 (1%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + +  +  + L  A+RY+LL GGK++R  L      L       AL    A+E IH  SL
Sbjct: 28  AALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEVALALPTAVALEMIHTMSL 87

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ LLT AFE+++     +      Q++
Sbjct: 88  IHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGDALLTRAFEMVALRSPGVPAERLLQVV 147

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             L+   G  G++GGQ++D++ E   +D   +  I   KTGAL+     +GA++A A + 
Sbjct: 148 GELSLAAGAPGLVGGQVVDLESEGKDVDLATLEYIHLHKTGALLQACVLTGAMIAGAPEP 207

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
             + LR +   +G+ FQ+ DD+LD 
Sbjct: 208 LLQGLRTYSRGIGLAFQIIDDILDV 232


>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
 gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
          Length = 297

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 109/197 (55%), Gaps = 5/197 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+L  GGK++R  LV              L    A+E IH YSLIHDDLP+MDN   
Sbjct: 38  AMHYSLFAGGKRLRPILVLAAGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDY 97

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRG+PT H  Y E  A++AG+ LLT AFE++S  P T   + I  +    L  + G QG+
Sbjct: 98  RRGRPTCHKVYGEAIALLAGDALLTLAFEVLSRIPATIPPERIL-RATRELAASAGSQGL 156

Query: 160 LGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ++D++ E    T  +V  I   KTG+L+      G I+  A + +   L  +GE L
Sbjct: 157 IGGQVVDMEAEGQPVTLEKVNYIHNHKTGSLIRACLRLGGILGGAGEEQLALLTRYGEAL 216

Query: 218 GIIFQLADDLLDCEEDL 234
           G+ FQ+ DD+LD   D 
Sbjct: 217 GLAFQITDDILDITGDF 233


>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
 gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
          Length = 296

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
          Length = 297

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 7/212 (3%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + +   + YA+L GGK++R FL+     L N N    ++   A+E IH YSL+HD
Sbjct: 25  ELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H  + E   I+ G+ LLTYAF ++S    +   + +   ++S 
Sbjct: 85  DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLEFLSSEQLVNIISK 144

Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T    G+ GM+GGQM+DI+ E   I    +  I   KTG L+    E   I+A+  ++++
Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKR 204

Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           + L  + + +G+ FQ+ DD+LD E   EDL K
Sbjct: 205 KVLEEYADLIGLAFQVKDDILDIEGTFEDLGK 236


>gi|313623887|gb|EFR94002.1| geranyltranstransferase [Listeria innocua FSL J1-023]
          Length = 293

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 114/190 (60%), Gaps = 3/190 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV       N+  +  L+   A+E IH YSLIHDDLP+MD+   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y + TAI+AG+ LLT AF I++  +  L    R  L+  ++++ G +GM+GGQ  D++
Sbjct: 103 KIYGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISYSSGAEGMVGGQQADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A A+  + +RLR F EN+GI FQ++DD
Sbjct: 162 AENKQVTLEELASIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQISDD 221

Query: 227 LLDCEEDLPK 236
           +LD   D  K
Sbjct: 222 ILDVIGDETK 231


>gi|308180453|ref|YP_003924581.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308045944|gb|ADN98487.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 296

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L  A+RY++L GGK++R  L       F++    A LR   A+E +H YSLIHDDLP+MD
Sbjct: 34  LTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT H+++ E  AI+AG+ L    FE I+   + L  +I +   L+L    G 
Sbjct: 94  NDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGP 151

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+ GQ+ D+    + +    +  + + KTGAL+ +A ++G I A      +E L  + 
Sbjct: 152 RGMVAGQIADVLGAGQHLALPALQQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYA 211

Query: 215 ENLGIIFQLADDLLDC 230
           +  G+ FQ+ DD+LD 
Sbjct: 212 DAYGLAFQIYDDILDV 227


>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
          Length = 385

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 116/200 (58%), Gaps = 4/200 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +H +++  A+RY+LL GGK++R  L      L   +  + +    A+E IH  SLIHDDL
Sbjct: 116 RHPEKIHEAMRYSLLAGGKRVRPILCIASCELVGGSEESVMPSACAVEMIHTMSLIHDDL 175

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E  A++AG+ LL +AFE I+     ++     +++  L  
Sbjct: 176 PCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIACSTKGVEAEKVLRVIWELGR 235

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKER 209
            IG +G++ GQ++D+    +    + +++ +   KT AL+  +   GAI+   S  E ER
Sbjct: 236 AIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHVHKTAALLEGSVVIGAIIGGGSDEEIER 295

Query: 210 LRCFGENLGIIFQLADDLLD 229
           LR F   +G++FQ+ DD+LD
Sbjct: 296 LRRFARCIGLMFQVVDDILD 315


>gi|300767239|ref|ZP_07077151.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300495058|gb|EFK30214.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 308

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L  A+RY++L GGK++R  L       F++    A LR   A+E +H YSLIHDDLP+MD
Sbjct: 46  LTDAMRYSVLAGGKRLRPLLTLAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMD 105

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT H+++ E  AI+AG+ L    FE I+   + L  +I +   L+L    G 
Sbjct: 106 NDQLRRGEPTNHVKFGEDVAILAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGP 163

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+ GQ+ D+    + +    +  + + KTGAL+ +A ++G I A      +E L  + 
Sbjct: 164 RGMVAGQIADVLGAGQHLALPALQQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYA 223

Query: 215 ENLGIIFQLADDLLDC 230
           +  G+ FQ+ DD+LD 
Sbjct: 224 DAYGLAFQIYDDILDV 239


>gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
 gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
          Length = 297

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 7/202 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
            + YA L GGK++R FL+     L N N    ++   A+E IH YSL+HDDLP++DN   
Sbjct: 35  GMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDY 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGM 159
           RRGK T H  + E   I+ G+ LLTYAF ++S    +L  + +   ++S T    G+ GM
Sbjct: 95  RRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGM 154

Query: 160 LGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQM+DI+ E   I    +  I   KTG L+    E   I+A+  +++++ L  + + +
Sbjct: 155 IGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLI 214

Query: 218 GIIFQLADDLLDCE---EDLPK 236
           G+ FQ+ DD+LD E   EDL K
Sbjct: 215 GLAFQVKDDILDVEGTFEDLGK 236


>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
 gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
          Length = 296

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 136/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F+      
Sbjct: 10  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMKAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
 gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
 gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
 gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
          Length = 293

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 4/201 (1%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +N ++  A+ Y+L  GGK+IR  L+     L+  +    L + +A+E IH YSLIHD
Sbjct: 25  KGSYNKKVYEAMEYSLGAGGKRIRPLLLLLTYMLYKDDFEKVLPIASAVEMIHTYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP MDN  +RRGKPT H  + E  A++AG+GLL     I+       + N        +
Sbjct: 85  DLPCMDNDDLRRGKPTNHKVFGEAVAVLAGDGLLNEGMSIMLKSCMNEQHNFIKACSF-I 143

Query: 151 THNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             + G +GM+GGQ +DI  ++  I   Q++ +   KTGA++  +  +GAI+  A + + E
Sbjct: 144 AESAGAEGMVGGQTVDILSENTKIPIDQLYYMHSKKTGAIIKASIIAGAILGEAPKRDIE 203

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  +G+ LG+ FQ+ DD+LD
Sbjct: 204 NLEYYGQKLGLAFQIKDDILD 224


>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 371

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 113/195 (57%), Gaps = 8/195 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L      TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 106 AMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 165

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLSLTHNIGLQG 158
           RRGKPT H  + E  A++AG+ LL++AFE + S+  + +   +R  + +  L   IG +G
Sbjct: 166 RRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEG 225

Query: 159 MLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           ++ GQ++DI  E +D   V +     I   KT AL+  +    AI+   S +E ERLR F
Sbjct: 226 LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLRAIVGGGSDDEIERLRKF 285

Query: 214 GENLGIIFQLADDLL 228
              +G++FQ+ DD+L
Sbjct: 286 ARCIGLLFQVVDDIL 300


>gi|90410905|ref|ZP_01218919.1| putative geranyltranstransferase [Photobacterium profundum 3TCK]
 gi|90328118|gb|EAS44429.1| putative geranyltranstransferase [Photobacterium profundum 3TCK]
          Length = 300

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 9/202 (4%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+  ++Y  LLGGK+ R FL      +            AA+ECIH YSLIHDDLP+MD+
Sbjct: 36  LVKTMKYGTLLGGKRARPFLTYITGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDD 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ---LMLSLTHNI 154
             +RRG PT HI +DE  AI+AG+ L T AFEI++    QL D+  +Q   ++  L    
Sbjct: 96  DELRRGHPTCHIAFDEALAILAGDALQTLAFEILAD--GQLSDDGNTQRIAMIKELAQAS 153

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211
           G  GM  GQ LD++ E   +D  ++  I K KTGAL+  A   GA+ A         +L 
Sbjct: 154 GAAGMCVGQALDLEAEGKRVDLQKLEAIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLN 213

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            F + +G+ FQ+ DD+LD   D
Sbjct: 214 QFADAIGLAFQVQDDILDVTSD 235


>gi|32490894|ref|NP_871148.1| hypothetical protein WGLp145 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166100|dbj|BAC24291.1| ispA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 300

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 132/214 (61%), Gaps = 7/214 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L+L+   ++ ++ N  L  A++YALL GGK++R+FLV     + NV+      + A+IE
Sbjct: 16  NLILKKYLNIFSKKNMNLTLAMKYALLNGGKRLRAFLVYCIGKMLNVSSNNLDCIAASIE 75

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLK 139
           CIH YSLIHDDLPSMDN   RRG+ + H++++E  AI+AG+ L + AF I+S+     + 
Sbjct: 76  CIHAYSLIHDDLPSMDNDRFRRGRESCHVKFNEYIAILAGDSLQSLAFNILSTVNMPDVS 135

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGA 197
            N R +++  L++  G +GM  GQ LD++++   I   Q+  I K KT  L+ +A     
Sbjct: 136 VNNRMKMISILSYASGAKGMCLGQSLDLENQGSLISIKQLEEIYKYKTSFLI-YAATRMT 194

Query: 198 IMAHASQNEKERLRC--FGENLGIIFQLADDLLD 229
           I++   +N+K  +    + +++G+ FQ+ DD+L+
Sbjct: 195 ILSSNIKNKKILINLIKYSKSIGLAFQIQDDILN 228


>gi|167770736|ref|ZP_02442789.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM
           17241]
 gi|167667331|gb|EDS11461.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM
           17241]
          Length = 293

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 4/198 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++ A+RY+LL  GK++R+ LV E A L +     A  +  AIE +H YSLIHDDLP MDN
Sbjct: 33  VVDAMRYSLLDAGKRLRAALVLEFARLASAPREGATALACAIEMLHAYSLIHDDLPCMDN 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGKP+ H ++ E TA++AG+ LLT AFE  +     L D  R + + +L+   G+ 
Sbjct: 93  DDFRRGKPSCHKEFGESTALLAGDALLTLAFETAAGAPL-LTDLQRVEAVCTLSKAGGVC 151

Query: 158 GMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ++D+  E   +DE  +  +  +KTGAL+  A   G +   A +   +    +  
Sbjct: 152 GMIGGQVIDLACEGNTVDEATLDTLCTLKTGALLRAAARLGCLAGKADKKMYDAADRYAA 211

Query: 216 NLGIIFQLADDLLDCEED 233
            +G+ FQ+ DD+LD   D
Sbjct: 212 AVGLAFQITDDILDVTGD 229


>gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
 gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
          Length = 296

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 116/201 (57%), Gaps = 6/201 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  LV         +        +A+E IH YSL+HDDLPSMD
Sbjct: 32  RLHEAMRYAVLGGGKRLRPLLVYSTGMALGASEAVLDAPASAVELIHAYSLVHDDLPSMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT H  +DE TA++ G+ L + AF I++   + L  + + ++++ L      
Sbjct: 92  NDDLRRGRPTCHKAFDEATALLVGDALQSLAFRILADSTSGLPASNQIKMLMLLAEAASS 151

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRC 212
           +GM GGQ +D++   + +   ++  + ++KTGAL+  +   GA   H + +    E L  
Sbjct: 152 RGMAGGQAIDLESVGQLLTLAELETMHRLKTGALIRASVLLGA-WCHPTIDPHTLENLDR 210

Query: 213 FGENLGIIFQLADDLLDCEED 233
           F + +G+ FQ+ DD+LD E D
Sbjct: 211 FAQCIGLAFQIQDDVLDVESD 231


>gi|225458370|ref|XP_002283364.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 371

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 16/222 (7%)

Query: 22  DLLLQTASHMQTQHND--------RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           D ++Q AS +    ++        ++  A+RY+LL GGK++R  L      L   +   A
Sbjct: 82  DYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRVRPALCLAACELVGGDESNA 141

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL +AFE ++
Sbjct: 142 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHLA 201

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGA 187
           +  + +  +     +  L  +IG +G++ GQ++DI      D  +D+ +   I   KT A
Sbjct: 202 TATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIH--KTAA 259

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  A   GA++   S  E E+LR +   +G++FQ+ DD+LD
Sbjct: 260 LLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILD 301


>gi|237737790|ref|ZP_04568271.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
 gi|229419670|gb|EEO34717.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
          Length = 300

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 3/196 (1%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
            ++YA+L GGK++R  L+     +        L   +AIE IH YSL+HDDLP++DN   
Sbjct: 39  GMKYAVLNGGKRLRPILLFMTLDILGCEREKGLATASAIEMIHSYSLVHDDLPALDNDDY 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGK T H ++ E   I+ G+ LLT+AF +++   + L      +++   +   G+ GM+
Sbjct: 99  RRGKLTTHKKFGEAEGILIGDALLTHAFYVLTEKNSHLSAEKIVEIVKLTSSYAGINGMI 158

Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQM+DI  E   ID   +  +   KTG L+    E   ++A AS  ++E L  + E +G
Sbjct: 159 GGQMVDIASEGKKIDLETLRYMHAHKTGKLIKLPVEVACVIADASIEDREVLTKYSELIG 218

Query: 219 IIFQLADDLLDCEEDL 234
           + FQ+ DD+LD E D 
Sbjct: 219 LAFQIKDDILDIEGDF 234


>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
 gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
          Length = 296

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANGLQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K K G 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDELE--YIHKHKAGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVE 229


>gi|315658203|ref|ZP_07911075.1| geranyltranstransferase [Staphylococcus lugdunensis M23590]
 gi|315496532|gb|EFU84855.1| geranyltranstransferase [Staphylococcus lugdunensis M23590]
          Length = 293

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 139/229 (60%), Gaps = 13/229 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           +++ +LDDL+       Q++    L  +++Y++  GGK++R  L+     + N ++   L
Sbjct: 12  QVNQVLDDLI------PQSKLGTNLEKSMQYSINAGGKRVRPLLLLLTLDMLNKDYQLGL 65

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              AA+E IH YSLIHDDLP+MD+   RRGK T H  + E  A++AG+ LLT AF++IS+
Sbjct: 66  ATAAALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVFGEWKAVLAGDALLTKAFDVISN 125

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
             TQL ++I+ +L+  L    G  GM+GGQ LD+Q E   +D + +  I + KTGAL+ F
Sbjct: 126 D-TQLDNDIKVKLIQRLAFASGHLGMVGGQALDMQSETQAVDISTLEQIHRAKTGALLTF 184

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           A  +   +A  +++  E L  F ++LG++FQ+ DDLLD    E  L KK
Sbjct: 185 AVMAATDIAQVNEHVAEHLNLFSQHLGLMFQIKDDLLDVYGEESKLGKK 233


>gi|16800468|ref|NP_470736.1| hypothetical protein lin1400 [Listeria innocua Clip11262]
 gi|16413873|emb|CAC96631.1| lin1400 [Listeria innocua Clip11262]
          Length = 293

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 114/190 (60%), Gaps = 3/190 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV       N+  +  L+   A+E IH YSLIHDDLP+MD+   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y + TAI+AG+ LLT AF I++  +  L    R  L+  ++++ G +GM+GGQ  D++
Sbjct: 103 KIYGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISYSSGAEGMVGGQQADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A A+  + +RLR F EN+GI FQ++DD
Sbjct: 162 AENKQVTLEELASIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFAENIGIGFQISDD 221

Query: 227 LLDCEEDLPK 236
           +LD   D  K
Sbjct: 222 ILDVIGDETK 231


>gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
 gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
          Length = 293

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 11/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++T LD  L   A+   T H      A+RYA+LGG K++R  L      L        
Sbjct: 12  ERVETALDHYLPGEATEPATLHE-----AMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  ++
Sbjct: 67  DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALT 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
           S    L    ++ L+  L    G  GM GGQ +D+      +  TQ+  + +MKTGAL+ 
Sbjct: 127 S--DVLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184

Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
            A   GA+          R L  +   +G+ FQ+ DD+LD   D
Sbjct: 185 AAVRMGALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTD 228


>gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330]
 gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
 gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12]
 gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1]
 gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330]
 gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
 gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12]
 gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1]
          Length = 296

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 29  SHMQTQHNDRLL-SAIRYAL-LGGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCY 85
           S +     DR L  A+ Y++  GGK+IR  L+ T  AS      +   +V AA+E +H Y
Sbjct: 20  SFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTY 79

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS     L  + +  
Sbjct: 80  SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGHSPKLL 137

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  +G I+A   
Sbjct: 138 LLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQP 197

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
           +     L+   E+LG+ FQ+ DDLLD 
Sbjct: 198 EEILLLLQRLAEHLGLAFQIRDDLLDV 224


>gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
 gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
          Length = 297

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 125/230 (54%), Gaps = 12/230 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L     R++ +L++   + A    +    +L  A+RY+LL GGK++R  L    A 
Sbjct: 6   LNSFLAAQQARVEALLNE---RVARLGPSGTPPQLAEAMRYSLLAGGKRLRPVLCLAFAD 62

Query: 64  LFNVNHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           L       +   G    A+E +H YSL+HDDLP+MDN   RRG+ T H  Y E  AI+AG
Sbjct: 63  LVARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAILAG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM- 179
           + LLT AF +++S      +++R+ L   L    G  GM+GGQ+LD  ++        + 
Sbjct: 123 DALLTEAFTLVASG----PESMRAALCRELAVASGAAGMVGGQVLDTAEDRPSALDYLIR 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + +MKTGAL+  AC  G + +    +   R   +G+ +G+ FQ+ADD+LD
Sbjct: 179 MHRMKTGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLD 228


>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
          Length = 365

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 115/199 (57%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   ++  A+RY+LL GGK++R  L      +   +   A+    A+E IH  SL+HDDL
Sbjct: 97  QEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDL 156

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E TA++AG+ LL+ AFE +++    +      Q +  L  
Sbjct: 157 PCMDNDDLRRGKPTNHKVFGENTAVLAGDALLSLAFEHVATKTQNVAPQRVVQAIGELGS 216

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G +G++ GQ++D+  E   +  T++  I + KT  L+  A   GAIM   ++ + ER+
Sbjct: 217 AVGSEGLVAGQIVDLASEGKQVSLTELEYIHQHKTAKLLEAAVVCGAIMGGGNEVDVERM 276

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +   +G++FQ+ DD+LD
Sbjct: 277 RSYARCIGLLFQVVDDILD 295


>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
 gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
          Length = 315

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + +  +  + L  ++RY+LL GGK++R  L      L   +   A+    A+E IH  SL
Sbjct: 43  AALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLAMPTAVALEMIHTMSL 102

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQ 145
           IHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ LL+ AFE++S  SP    +  ++  
Sbjct: 103 IHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFEMVSLRSPGVPPERLLKVV 162

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
             L+L    G  G++GGQ++D++ E   +D   +  I   KT AL+     +GA++  A 
Sbjct: 163 AELALVS--GAPGLVGGQVVDLESEGREVDLETLEYIHLHKTAALLRACVVTGALIGGAD 220

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
            N+ E +R +   +G+ FQ+ DD+LD 
Sbjct: 221 ANQVEAMRTYANGIGLAFQIVDDILDV 247


>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 295

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 3/199 (1%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+RY++L GGK++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 32  RLHAAMRYSVLEGGKRVRPLLAYAAGELAGAPIERVEIAAAAVELIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPT HI+YDE TA++ G+ L + AF+++S  +     + + Q++  L    G 
Sbjct: 92  DDVLRRGKPTCHIEYDEATALLVGDALQSLAFQLLSEHRLSDDPSRQLQMVRLLAAASGS 151

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM GGQ +D+    + +   ++  +   KTGAL+  A   GA      Q + ++L  +G
Sbjct: 152 RGMAGGQAIDLASVGKQLAMPELEQMHIYKTGALIRAAILLGAHCGKLDQAQLDKLDRYG 211

Query: 215 ENLGIIFQLADDLLDCEED 233
           + +G+ FQ+ DD+LD E D
Sbjct: 212 KCIGLAFQVVDDVLDSEAD 230


>gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. NRRL B-14911]
 gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. NRRL B-14911]
          Length = 298

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 120/197 (60%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y+L  GGK+IR  LV      F  +    L+  AA+E IH YSLIHDDLPSMD+
Sbjct: 35  LKKAMHYSLQAGGKRIRPLLVFATLKAFGEDTKKGLQAAAAVEMIHTYSLIHDDLPSMDD 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGL 156
             +RRGKPT H  + E  AI+AG+ LLTY+F++++    +  D  ++  L+  L    G 
Sbjct: 95  DDLRRGKPTSHKVFGEANAILAGDALLTYSFQLLAQMAPEDADAEVKLALINELARASGA 154

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+GGQ  DI  +D+ +D  ++  I   KTG L+ F+  +GA+++ A ++  + L  F 
Sbjct: 155 EGMVGGQTADIEGEDKDLDLEELEYIHVHKTGKLLAFSVAAGALLSRAEESRLKSLNEFA 214

Query: 215 ENLGIIFQLADDLLDCE 231
            +LG+ FQ+ DD+LD E
Sbjct: 215 HHLGLAFQIRDDILDLE 231


>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
 gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
          Length = 296

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E +H YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMVHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
           2396]
 gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
           2396]
          Length = 299

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 126/231 (54%), Gaps = 14/231 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
            Q N  +ID  L +LL +           RL  A+ Y +L GGK++R  L+         
Sbjct: 12  FQRNRAQIDQALANLLPEPEGP-----KARLNEAMGYCVLNGGKRVRPLLLLATTEALGG 66

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   AL    A+E IH YSL+HDDLP+MD+  +RRGKPT HI YDE TAI+ G+GL T A
Sbjct: 67  DLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVGDGLQTLA 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKM 183
           F  ++       +++  Q++  L    G QGM+GGQ +DI  E     ++E +   ++  
Sbjct: 127 FSALTESSGASAESVL-QMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELERMHLE-- 183

Query: 184 KTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  +   GA+ +  +  E  E LR F   +G+ FQ+ DD++D E D
Sbjct: 184 KTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESD 234


>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
          Length = 366

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 109/195 (55%), Gaps = 4/195 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP MDN
Sbjct: 102 IYEAMRYSLLAGGKRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDN 161

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             IRRGKPT H  Y E  A++AG+ LL +AFE I++    +  +     +  L  +IG +
Sbjct: 162 DDIRRGKPTNHKVYGEDVAVLAGDSLLAFAFEFIATATAGVSPSRILAAIGELAKSIGTE 221

Query: 158 GMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G++ GQ+ DI    +  +    +  I   KT AL+  +   GAI+   +  E E+LR F 
Sbjct: 222 GLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRRFA 281

Query: 215 ENLGIIFQLADDLLD 229
             +G++FQ+ DD+LD
Sbjct: 282 RCIGLLFQVVDDILD 296


>gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
 gi|149753830|gb|EDM63761.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
          Length = 300

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 129/228 (56%), Gaps = 10/228 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +++     I+ IL + L +   + +      ++ A+ Y+L+ GGK++R  L+ E + LF 
Sbjct: 10  QMKRKVAEIEEILKEYLPKPEGYQKV-----IMEAMEYSLMAGGKRLRPMLMRETSRLFG 64

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                     AA+E IH YSL+HDDLP+MDN   RRG+ T HI Y E   I+AG+ LL Y
Sbjct: 65  DETEALCPFMAALEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNY 124

Query: 127 AFEI-ISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           AFE    + +T  +++++    LS L    G+ GM+GGQ++D+++    + +  +  I +
Sbjct: 125 AFETAFRAFETAPQESLKIGRALSVLGRKAGVYGMIGGQVIDVKETGHAVPKDVLDTIYE 184

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +KTGAL+  A   GAI+  A + +  ++      +GI FQ+ DD+LD 
Sbjct: 185 LKTGALIECAMMIGAILGGAEEEDVRKVEKIAHYVGIAFQIQDDILDV 232


>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
          Length = 368

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 4/197 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP MD
Sbjct: 103 KIHESMRYSLLAGGKRVRPALCLAACELVGGDESMAMPAACAVEMIHTMSLIHDDLPCMD 162

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT HI + E  A++AG+ LL +AFE I+     +      + +  L   IG 
Sbjct: 163 NDDLRRGKPTNHIVFGENVAVLAGDALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGA 222

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + E    ++  I   KT  L+  A   GAIM   +  E E+LR +
Sbjct: 223 EGLVAGQVVDICSEGLSEVDLEKLEFIHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKY 282

Query: 214 GENLGIIFQLADDLLDC 230
             ++G++FQ+ DD+LD 
Sbjct: 283 ARDIGLLFQVVDDILDV 299


>gi|205351734|ref|YP_002225535.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207855904|ref|YP_002242555.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|205271515|emb|CAR36333.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206707707|emb|CAR31991.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326626769|gb|EGE33112.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 299

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L T AF I+S +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFAILSDAPMPEVTDRDRIAMIAELAN 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231


>gi|312869913|ref|ZP_07730052.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
 gi|311094498|gb|EFQ52803.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
          Length = 291

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 16/228 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALL-GGKKIRSFLVTECASLFN 66
           L++   R+ + LD       +H+    +   L+A ++Y++L GGK++R  L      +F 
Sbjct: 5   LEQLKARVTSYLD-------THLANDVDQSTLAASMQYSVLAGGKRLRPTLTLATVEIFG 57

Query: 67  VNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              LT   +R   A+E +H YSLIHDDLP+MDN  +RRG PT H ++    A +AG+GLL
Sbjct: 58  -GELTEDVVRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDGLL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQK 182
           T AF+ ++    QL   ++SQL L L    G  GM+ GQ  DI+      T  Q+  + +
Sbjct: 117 TLAFQWVTD--NQLPATMKSQLALELAKAAGPAGMVAGQARDIEGTGRRLTLDQLRYLHR 174

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            KTGAL+ +A  +G I+       +  L  FG + G+ FQ+ DDL+D 
Sbjct: 175 QKTGALLRYAVLAGGIITVQPAAVQRLLAQFGSSYGLAFQIYDDLMDV 222


>gi|323488929|ref|ZP_08094166.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
 gi|323397321|gb|EGA90130.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
          Length = 293

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/201 (41%), Positives = 128/201 (63%), Gaps = 11/201 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           D L  ++ Y+L  GGK+IR  L+      +    H  AL+V AAIE IH YSLIHDDLPS
Sbjct: 29  DSLKESMHYSLQAGGKRIRPILLLAVLHEMTGKEHPDALKVAAAIEMIHTYSLIHDDLPS 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG PT H  + E  AI+AG+ LLTY+F +++  +    D+ + +L+  ++ + 
Sbjct: 89  MDDDDLRRGMPTNHKVFGEAVAILAGDALLTYSFGVVARLEHVSSDD-KVRLIDLMSVSA 147

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKER 209
           G +GM+GGQ+LDI+ E   E Q+ +     + ++KTGAL+ F+  +G I+A A+ +E   
Sbjct: 148 GAEGMVGGQVLDIEGE---EKQLQLEELEQVHRLKTGALLTFSILAGGILAQATNDEIIA 204

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  FG++LG+ FQ+ DD+LD 
Sbjct: 205 LSQFGQHLGLAFQIQDDILDV 225


>gi|332160732|ref|YP_004297309.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664962|gb|ADZ41606.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330861141|emb|CBX71403.1| geranyltranstransferase [Yersinia enterocolitica W22703]
          Length = 306

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 123/204 (60%), Gaps = 7/204 (3%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLP 93
           N  L+ A+RY A+LGGK++R +LV     +F ++ LT+L    AAIECIH YSLIHDDLP
Sbjct: 36  NSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTSLDAPAAAIECIHAYSLIHDDLP 94

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+PT H+++ E  AI+AG+ L T AF I++ +P   + D  R  ++  L H
Sbjct: 95  AMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPDVADKDRLSMIAELAH 154

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G+ GM GGQ LD+  E    T   +  I + KTGAL+  A   GA+ A A   E    
Sbjct: 155 ASGVAGMCGGQALDLAAESRQTTLDDLEKIHRHKTGALIRAAVRLGALAAGAPGREALPL 214

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +   +G+ FQ+ DD+LD   D
Sbjct: 215 LDRYANAIGLAFQVQDDILDVIGD 238


>gi|299139494|ref|ZP_07032668.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598422|gb|EFI54586.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 324

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 33/220 (15%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLF------------NVNHLTAL-RVGAAIECIHCYSL 87
           A+R++   GGK++R  L  E A +                H   +  + AA+E +H YSL
Sbjct: 37  AMRHSTFAGGKRLRPILCMEAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEMLHTYSL 96

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRS 144
           IHDDLP++DN  +RRG+PT H+ + E TAI+AG+ L T AF+ I+S   P   +   +R 
Sbjct: 97  IHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIASLPAPPEAVVAILR- 155

Query: 145 QLMLSLTHNIG---------LQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFAC 193
           ++ LS+   IG           GM+GGQ++DI+ E    T   V  I + KTGAL+  + 
Sbjct: 156 KISLSIGTGIGRWGDHDTGIAPGMIGGQVVDIESEGTKPTPDLVEAIHRAKTGALITVSI 215

Query: 194 ESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLD 229
            +GAI   +      +  ER+R FGE  G+ FQ+ DD+LD
Sbjct: 216 VAGAIYGSSRHGLPSSYHERIRTFGEKAGLAFQIVDDVLD 255


>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
 gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
          Length = 296

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q  +  R   A+ Y+L  GGK++R  L+      F       
Sbjct: 10  KESKTFVEEKLVSYANELQCPNVLR--EAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGELLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ +++ L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGAILSDATEEQEKNLLTFAKYIGLAFQIRDDILDVE 229


>gi|213417843|ref|ZP_03350948.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 268

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/200 (43%), Positives = 121/200 (60%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP+MD+
Sbjct: 1   MVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDD 60

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG PT HI++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +  G+
Sbjct: 61  DDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGI 120

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213
            GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    L  +
Sbjct: 121 AGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRY 180

Query: 214 GENLGIIFQLADDLLDCEED 233
            E++G+ FQ+ DD+LD   D
Sbjct: 181 AESIGLAFQVQDDILDVVGD 200


>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
 gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
 gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
 gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
          Length = 297

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 134/224 (59%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 11  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLG 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 69  VGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+ GQ+ D++ E     I+E +   I K KTG 
Sbjct: 129 TYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELE--YIHKHKTGK 186

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 187 LLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 230


>gi|116872794|ref|YP_849575.1| geranyltranstransferase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741672|emb|CAK20796.1| geranyltranstransferase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 293

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/190 (42%), Positives = 114/190 (60%), Gaps = 3/190 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV       N + +  L+   A+E IH YSLIHDDLP+MD+   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALNKDPMIGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKKTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + + TAI+AG+ LLT AF I++  +  L    R  L+  ++++ G +GM+GGQ  DI+
Sbjct: 103 KVFGDATAILAGDALLTLAFSIVAEDE-NLSFETRIALINQISYSSGAEGMVGGQQADIE 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I   KTG L+ FA  S A +A A+  + +RLR F EN+G+ FQ++DD
Sbjct: 162 AENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEANSEQTKRLRIFAENIGVGFQISDD 221

Query: 227 LLDCEEDLPK 236
           +LD   D  K
Sbjct: 222 ILDVIGDETK 231


>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
 gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
          Length = 309

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 18/233 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+E  K  +  LD+ +          + +++  ++RY+LL GGK++R  L    + 
Sbjct: 18  LVAYLKERQKLCEAALDEAI-------PVIYPEKIYESMRYSLLAGGKRLRPILCLATSE 70

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +       A+    A+E IH  SLIHDDLP+MDN   RRG  T H  Y +  AI+AG+GL
Sbjct: 71  MMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGL 130

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
           L YAFE ++  +P++  +D +  Q++  L   +G  G++GGQ++D+  E    I    + 
Sbjct: 131 LAYAFEFVAIRTPESVPRDRVL-QVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLN 189

Query: 179 MIQKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            I   KT AL+  C  C  G I+A AS  + +RL  + +N+G+ FQ+ DD+LD
Sbjct: 190 FIHNHKTAALLEACVVC--GGILAGASSEDVQRLSRYSQNIGLAFQIIDDILD 240


>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 370

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 4/201 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   ++  ++RY+LL GGK++R  L      L   N   A+    A+  IH  SLIHDDL
Sbjct: 101 QEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVGMIHTMSLIHDDL 160

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT HI + E  A++AG+ LL +AFE I+     +      + +  L  
Sbjct: 161 PCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAK 220

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            IG +G++ GQ++DI  E    +D  ++  I   KT  L+  A   GAI+   +  E E+
Sbjct: 221 AIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEK 280

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           LR +   +G++FQ+ DD+LD 
Sbjct: 281 LRKYARGIGLLFQVVDDILDV 301


>gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
           WAL-14163]
 gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
           WAL-14163]
          Length = 294

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 113/201 (56%), Gaps = 6/201 (2%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           H   +  A+ Y++  GGK++R  L+ E   LF    +      AAIE IH  SLIHDDLP
Sbjct: 27  HQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGGTGIEIEPFMAAIEMIHTSSLIHDDLP 86

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLT 151
            MDN   RRGK T  + Y    A++AG+ LL YA E  ++   Q+ DN +   + +  L 
Sbjct: 87  CMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYAIE-TAARAFQMTDNAQRVGKCIGILA 145

Query: 152 HNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G+ GM+GGQ +D++  D+ I + ++  I ++KTGAL+  A   GA+MA AS  E E 
Sbjct: 146 QKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECET 205

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           +      +G+ FQ+ DD+LD 
Sbjct: 206 VERMAAAIGLAFQIQDDILDV 226


>gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
 gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
          Length = 295

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 112/196 (57%), Gaps = 5/196 (2%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y  LLGGK+IR +L    A L       AL    A+E IH YSLIHDDLP+MD+
Sbjct: 31  LKEAMAYGVLLGGKRIRPYLTMAVAELCGAETNDALDAACAVELIHAYSLIHDDLPAMDD 90

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGL 156
             +RRG PT HI++ E TA++AG+ L T AFE++S+  +T+L    R  ++  L    G 
Sbjct: 91  DELRRGHPTCHIKFGEATAVLAGDALQTLAFEVLSTNLETKLSSQRRIAMIQHLASASGA 150

Query: 157 QGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCF 213
           +GM  GQ LD+      IDE ++  I + KTGAL+  +   G +  +  SQ   +    F
Sbjct: 151 KGMCFGQALDLDATGRAIDELELEKIHRHKTGALIRASAALGVLAGNDESQQYLDHFCDF 210

Query: 214 GENLGIIFQLADDLLD 229
              +G+ +Q+ DD+LD
Sbjct: 211 ASWIGLAYQVYDDILD 226


>gi|21232031|ref|NP_637948.1| farnesyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767842|ref|YP_242604.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|21113769|gb|AAM41872.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66573174|gb|AAY48584.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
           campestris pv. campestris str. 8004]
          Length = 291

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 116/199 (58%), Gaps = 9/199 (4%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+R+A+LGG K++R  LV    +LF     +      A+E IH YSL+HDDLP+MD
Sbjct: 30  RLHAAMRHAVLGGGKRMRPLLVYASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG PTVHI +DE TAI+AG+ L   AFE+++         +R   + SL    G 
Sbjct: 90  DDALRRGHPTVHIAFDEATAILAGDALQARAFELLAEAPADAA--LRVGWLQSLASAAGA 147

Query: 157 QGMLGGQMLDIQDEFIDETQVF-MIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212
            GM GGQ LDI  +   + Q    +Q+M   KTGAL+  A   G +   A   +++RL  
Sbjct: 148 AGMCGGQALDI--DATGQVQALEALQRMHALKTGALIRAAVRMGVLTGGAGIADQQRLDA 205

Query: 213 FGENLGIIFQLADDLLDCE 231
           F + LG+ FQ+ DD+LD E
Sbjct: 206 FADALGLAFQVRDDILDVE 224


>gi|295099642|emb|CBK88731.1| Geranylgeranyl pyrophosphate synthase [Eubacterium cylindroides
           T2-87]
          Length = 282

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 7/196 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R   A+ Y+L+ GGK++R  L+      + ++         AIE IH YSLIHDDLP+MD
Sbjct: 22  RTKEAMCYSLMNGGKRVRPQLLFAALQHYGMDPKDGFACACAIEMIHTYSLIHDDLPAMD 81

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKP+ H  YDE  AI+AG+GLLT AFE++   +T   D  + +L+ +L+   G+
Sbjct: 82  NDDFRRGKPSCHKAYDEACAILAGDGLLTKAFEVVL--RTPCSDTNKVKLVEALSSYSGI 139

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            GM+ GQ LDIQ E         +  I + KT  L+       AI+A+  ++  E ++  
Sbjct: 140 DGMIYGQELDIQSENDPHATLDTLLKIDEYKTAKLLTLPLVCAAIIANKHED-IEIMKKI 198

Query: 214 GENLGIIFQLADDLLD 229
           G +LG+ FQ+ DD+LD
Sbjct: 199 GYDLGVQFQIQDDILD 214


>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
           9312]
          Length = 300

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 116/199 (58%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ + L  ++RY+LL GGK+IR  L     SL       A+    AIE IH  SLIHDDL
Sbjct: 33  ENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDL 92

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN  +RRG+PT H  Y +  AI+AG+ LLT AFE++S     +       ++  L+ 
Sbjct: 93  PAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSL 152

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G  G++GGQ++D++ E   +D   +  I   KTGAL+     +GA++A A++   + L
Sbjct: 153 VAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANEETLQAL 212

Query: 211 RCFGENLGIIFQLADDLLD 229
             + E +G+ FQ+ DD+LD
Sbjct: 213 TTYAEGIGLAFQIIDDILD 231


>gi|268592056|ref|ZP_06126277.1| geranyltranstransferase [Providencia rettgeri DSM 1131]
 gi|291312449|gb|EFE52902.1| geranyltranstransferase [Providencia rettgeri DSM 1131]
          Length = 305

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 119/200 (59%), Gaps = 5/200 (2%)

Query: 36  NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L  A+RY  LLGGK++R FL     S+F V+        AA+ECIH YSLIHDDLP+
Sbjct: 35  NLPLAQAMRYGTLLGGKRLRPFLTYAIGSMFGVSQENLDAPAAAVECIHAYSLIHDDLPA 94

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT HI+Y E  A++AG+ L T AF+++SS P   + D  R  ++  L++ 
Sbjct: 95  MDDDDLRRGQPTCHIKYGEGNAVLAGDALQTLAFQLLSSAPMPDVTDKDRIAMIAELSYA 154

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210
            GL GM GGQ LD+  E   +D   +  I + KTGAL+  A   GA  A    Q     L
Sbjct: 155 SGLAGMCGGQALDLDAEGKQVDLESLERIHQHKTGALIRAAIRLGAFAAGEKGQQLLPVL 214

Query: 211 RCFGENLGIIFQLADDLLDC 230
             + +++G+ FQ+ DD+LD 
Sbjct: 215 DKYAQSIGLAFQVQDDILDV 234


>gi|56461237|ref|YP_156518.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
 gi|56180247|gb|AAV82969.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
          Length = 295

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 5/200 (2%)

Query: 36  NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N RL  A+++  L+GGK+IR +L+   A +   N   AL+  AA+E IH YSLIHDDLP+
Sbjct: 28  NPRLNQAMQHGVLMGGKRIRPYLLVTVADICGANKNDALQAAAAVELIHAYSLIHDDLPA 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT HI YDE TAI+AG+ L T AFE+++  +  QL    + QL+  L   
Sbjct: 88  MDDDDLRRGQPTCHIAYDEATAILAGDALQTLAFEVLTENRMEQLPSERQLQLVQVLAKA 147

Query: 154 IGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERL 210
            G +GM  GQ +D+Q   + + E  +  +   KTGAL+  A   G +  +  +Q  +E+ 
Sbjct: 148 SGARGMCAGQAIDLQATAKIVTEDALEQMHLSKTGALITAAATMGVLCGNDNAQQWREKF 207

Query: 211 RCFGENLGIIFQLADDLLDC 230
             F   LG+ FQ+ DD+LD 
Sbjct: 208 EQFAHYLGLAFQVQDDILDV 227


>gi|121145|sp|P80042|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
           Short=GGPP synthase; Short=GGPS; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; Flags: Precursor
 gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
          Length = 369

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 121/225 (53%), Gaps = 11/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + E +  ++  LD+ ++    H+       +  A+RY+LL GGK++R  L      L   
Sbjct: 82  VTEKAISVNKALDEAIIVKEPHV-------IHEAMRYSLLAGGKRVRPMLCLAACELVGG 134

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ LL +A
Sbjct: 135 NQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFA 194

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMK 184
           FE I +    +  +     +  L  +IG +G++ GQ+ DI+   +  +    +  I   K
Sbjct: 195 FEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHK 254

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T AL+  +   GAI+   +  E E+LR F   +G++FQ+ DD+LD
Sbjct: 255 TAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILD 299


>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
 gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
          Length = 345

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ + L  ++RY+LL GGK++R  L      L   +   AL    A+E +H  SLIHDDL
Sbjct: 77  KYPETLNESMRYSLLAGGKRVRPALCLAACELVGGDIHAALPAACAMEMVHTMSLIHDDL 136

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           PSMDN   RRG+PT H  Y E  AI+AG+ LL+++FE I+     +      ++++ L  
Sbjct: 137 PSMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFSFEHIARATKGVPAERVLRVIMELGK 196

Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G  G++ GQ++DIQ  D+ +    +  I + KT AL+  +   GAI+  A ++  E+L
Sbjct: 197 AVGQDGLVAGQVVDIQSEDKEVGLDVLKYIHEHKTAALLEASVVCGAILGGADESTIEKL 256

Query: 211 RCFGENLGIIFQLADDLLDC 230
           R +  N+G+ FQ+ DD+LD 
Sbjct: 257 RKYSLNIGLAFQVIDDILDV 276


>gi|198283751|ref|YP_002220072.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665395|ref|YP_002426382.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248272|gb|ACH83865.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517608|gb|ACK78194.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 306

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 125/230 (54%), Gaps = 18/230 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +RI+ +L+ LL    +H+      RL  A+RY+ LGG K++R  LV    +   V     
Sbjct: 21  RRIEDVLETLL--PPAHLLPA---RLHDAMRYSTLGGGKRVRPLLVYAAGACLGVPLELL 75

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R  AA+E IH YSL+HDDLP+MDN  +RRG PT H  YDE TAI+ G+GL   AF +++
Sbjct: 76  DRPAAALEMIHAYSLVHDDLPAMDNDDLRRGLPTCHRAYDEATAILVGDGLQAQAFLVLA 135

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALM 189
            P   +    + Q++ SL    G +GM+GGQ +D+      E  +  +++M   KTG LM
Sbjct: 136 EPGWGMAAERQVQMLASLAQAAGSRGMVGGQAIDLA-AVGHELALPALEQMHLHKTGMLM 194

Query: 190 CFA-----CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             A     C +G     A +     L  + + +G+ FQ+ DD+LD   DL
Sbjct: 195 RCAIQLALCAAG---IDAQEARGAALLRYADRVGLAFQVQDDILDEIGDL 241


>gi|269962343|ref|ZP_06176693.1| geranyltranstransferase [Vibrio harveyi 1DA3]
 gi|269832839|gb|EEZ86948.1| geranyltranstransferase [Vibrio harveyi 1DA3]
          Length = 294

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 129/240 (53%), Gaps = 18/240 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q N+++++  L+ L               L+ A++Y LL GGK++R FLV 
Sbjct: 1   MQETLTSYQQRNNQQLNLWLEQL---------PHQEQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDI--QDEFIDE 174
           G+ L T AF I++  + +L  N  SQ   ++ +L    G  GM  GQ LD+  ++  +  
Sbjct: 112 GDALQTLAFTILA--EGELNPNAESQRIKMVQALAQASGASGMCLGQALDLGAENRRVSL 169

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
             +  I + KTGAL+  A + GA+ A     E    L  + + +G+ FQ+ DD+LD   D
Sbjct: 170 ADLEEIHRNKTGALINCAVKLGALAAGEKGLEVLPHLERYSKAIGLAFQVQDDILDIISD 229


>gi|161870803|ref|YP_001599976.1| geranyltranstransferase [Neisseria meningitidis 053442]
 gi|161596356|gb|ABX74016.1| geranyltranstransferase [Neisseria meningitidis 053442]
          Length = 298

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 116/196 (59%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L  V H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGGVVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H+QYDE TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +  +  +  +KTGAL+  A   GA      S  E   L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13]
 gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13]
          Length = 301

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 124/214 (57%), Gaps = 7/214 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D  L+   +   ++N  L  ++ Y++ +GGK+IR  L+     ++  ++   L    AIE
Sbjct: 22  DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 81

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLK 139
            IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +I +     + K
Sbjct: 82  MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGK 141

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196
             +++  +++     G  GM+GGQ++DI +E  +E  +  +  M   KTG L+  +  SG
Sbjct: 142 SALKATKIIA--DAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSG 199

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A++A AS+ + ++L  FG  LG+ FQ+ DD+LD 
Sbjct: 200 AVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDV 233


>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
 gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
          Length = 291

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 12/202 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +D L  A+ Y+L+ GGK++R  L+   A     +    L V  A+E IH YSLIHDDLP+
Sbjct: 27  DDTLRQAMAYSLMAGGKRLRPVLLMAAADAVGADGAKFLSVACALEMIHTYSLIHDDLPA 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  + +  AI+AG+GLLT AF +I   +     N+ +  +L +   I
Sbjct: 87  MDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFTVILRQQ-----NVSADTLLRVVDEI 141

Query: 155 ----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G +GM+GGQ+LD++ E   I   ++  +   KTGAL   A  SGAI+  AS+ +  
Sbjct: 142 SRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLA 201

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
            L  + E  G+ FQ+ DD+LD 
Sbjct: 202 ALTTYAEQFGLAFQITDDILDV 223


>gi|319892507|ref|YP_004149382.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162203|gb|ADV05746.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 293

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 129/220 (58%), Gaps = 10/220 (4%)

Query: 20  LDDLLLQTASHMQ-----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TA 72
           L++LL Q   H+      +Q    L  ++RY+L  GGK+IR  L+     + +   L + 
Sbjct: 5   LNELLEQFNGHLNHAIEDSQLGTSLEQSMRYSLEAGGKRIRPLLMLATIKMLDHQKLESG 64

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + V  A+E IH YSLIHDDLP+MD+  +RRGKPT H  Y E  AI+AG+ LLT AFE I 
Sbjct: 65  MHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAILAGDALLTKAFEKI- 123

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
           +  T +   I+  L+  ++   G QGM+GGQ LD+Q E   I   ++  I   KTGAL+ 
Sbjct: 124 ALTTHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEKLESIHIHKTGALIQ 183

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           FA E+  I+    Q   ++L  F ++LG+IFQ+ DDLLD 
Sbjct: 184 FAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDV 223


>gi|283784240|ref|YP_003364105.1| geranyltranstransferase [Citrobacter rodentium ICC168]
 gi|282947694|emb|CBG87249.1| geranyltranstransferase [Citrobacter rodentium ICC168]
          Length = 299

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 122/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGKMFGVSLSTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFTIISDAPMPEVTDRDRIAMISELAN 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLDAEGRQVPLAALEKIHRHKTGALIRAAVRLGALSAGEKGRNVLPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231


>gi|123443361|ref|YP_001007335.1| geranyltranstransferase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090322|emb|CAL13188.1| geranyltranstransferase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 306

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 127/203 (62%), Gaps = 11/203 (5%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMD 96
           L+ A+RY A+LGGK++R +LV     +F ++ LT+L    AAIEC+H YSLIHDDLP+MD
Sbjct: 39  LVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTSLDAPAAAIECVHAYSLIHDDLPAMD 97

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG 155
           +  +RRG+PT H+++ E  AI+AG+ L T AF I++ +P  ++ D  R  ++  L +  G
Sbjct: 98  DDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPEVADKDRLSMIAELAYASG 157

Query: 156 LQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210
           + GM GGQ LD++ E     +DE +   I + KTGAL+  A   GA+ A AS  E    L
Sbjct: 158 VAGMCGGQALDLEAEARQITLDELE--RIHRHKTGALIRAAVRLGALAAGASGREALPLL 215

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +   +G+ FQ+ DD+LD   D
Sbjct: 216 DRYANAIGLAFQVQDDILDVIGD 238


>gi|261822523|ref|YP_003260629.1| geranyltranstransferase [Pectobacterium wasabiae WPP163]
 gi|261606536|gb|ACX89022.1| Polyprenyl synthetase [Pectobacterium wasabiae WPP163]
          Length = 303

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 132/238 (55%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
            N  L +  Q  ++ +   + DL  Q++          L++A+ Y +LLGGK++R FLV 
Sbjct: 4   FNTQLNAHYQRTNRMLGHFIADLPFQSSP---------LVNAMEYGSLLGGKRLRPFLVY 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF +   +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+A
Sbjct: 55  TTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILA 114

Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++ +P  Q+ D  R  ++  L H  G+ GM GGQ  D++ E   +D   
Sbjct: 115 GDALQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQSFDLEAEGHQVDLVA 174

Query: 177 VFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  I + KTGAL+  A   GA  A  A +     L  +   +G+ FQ+ DD+LD   D
Sbjct: 175 LERIHRHKTGALIRAAVRLGAFAAGDAGRAALPHLDRYANAIGLAFQVQDDILDVVGD 232


>gi|154502459|ref|ZP_02039519.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
 gi|153796855|gb|EDN79275.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
          Length = 300

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +E + +I+ IL   L +   + +      ++ A+ Y++L GGK++R  L+ E   LF   
Sbjct: 12  KEKTAQIERILKAYLPRAQGYQEV-----IMDAMSYSMLAGGKRLRPMLMQETYRLFGGA 66

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                   AAIE IH YSL+HDDLP+MDN   RRG+ T H+ Y E   I+ G+ LL YAF
Sbjct: 67  DSVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMGILTGDALLNYAF 126

Query: 129 EIISS-----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
           E  +S     P+  L   +  + +  L    G+ GM+GGQ++D++   + ID  ++  I 
Sbjct: 127 ETAASAFETAPEKSL---LIGKAIRILGQKAGIYGMIGGQVVDVKSSGKKIDGEKLEFIY 183

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           ++KTGAL+  +   GA++A A     + +      +G+ FQ+ DD+LD 
Sbjct: 184 RLKTGALIEASMMIGAVLAGADDESVQVVEEIAAKVGMAFQIQDDILDV 232


>gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 300

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 10/203 (4%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+  A+ Y+L +GGK++R  L    A L        L +  A+E +H  SLIHDDLP+MD
Sbjct: 36  RMWDAMVYSLKVGGKRLRPVLCMAAAELLGGRSDLVLPMALALEMVHTASLIHDDLPAMD 95

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTH--- 152
           +  +RRG+PT H+ Y E  AI+AG+ LL  AFE+   P T+L   I R  ++ ++ H   
Sbjct: 96  DDVLRRGQPTNHVVYGEALAILAGDALLCQAFEL---PLTELPSEIPRGNVVKAVAHFAR 152

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERL 210
           +IG  G+ GGQ+LD++ E  +E       I  +KT AL+  +  +GAI++  S  + E L
Sbjct: 153 SIGPGGICGGQVLDMESEGSEEECSSPTEISTLKTAALIRTSLITGAILSGGSAEDLEAL 212

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +G  LG+ FQ+ADD+LD + D
Sbjct: 213 ESYGLELGVAFQIADDILDVKGD 235


>gi|254521204|ref|ZP_05133259.1| geranyltranstransferase [Stenotrophomonas sp. SKA14]
 gi|219718795|gb|EED37320.1| geranyltranstransferase [Stenotrophomonas sp. SKA14]
          Length = 292

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/222 (40%), Positives = 126/222 (56%), Gaps = 14/222 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN--VNHLT 71
           RI++ LD  L   A   Q     RL  A+RY++LGG K++R  LV     LF   + HL 
Sbjct: 13  RIESELDAALPSPAEAPQ-----RLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQLEHLD 67

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +  A+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+AG+ L   AF ++
Sbjct: 68  AAAM--AVELIHAYSLVHDDLPAMDDDDLRRGKPTTHIAFDEATAILAGDALQARAFGLL 125

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALM 189
           +     L   +R   + +L H  G  GM GGQ LDI      +T   +  +  +KTGAL+
Sbjct: 126 AD--APLPATLRVACLQTLAHASGAAGMCGGQALDIDATGQQQTLAALTRMHALKTGALI 183

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             A   GA+   A + +  +L  F + LG+ FQ+ DD+LD E
Sbjct: 184 RAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVE 225


>gi|50120071|ref|YP_049238.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
 gi|49610597|emb|CAG74042.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
          Length = 303

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 123/200 (61%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+ Y +LLGGK++R FLV     LF++   +     AA+ECIH YSLIHDDLP+MD+
Sbjct: 33  LVNAMEYGSLLGGKRLRPFLVYTTGELFDMPLESLDAPAAAVECIHAYSLIHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E TAI+AG+ L T AF I++ +P TQ+ D  R  ++  L    G+
Sbjct: 93  DDLRRGQPTCHIKFGEATAILAGDALQTLAFSILADAPMTQVSDRDRLAMISELAQASGV 152

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213
            GM GGQ  D++ E   ++   +  I + KTGAL+  A   GA+ A  A ++    L  +
Sbjct: 153 AGMCGGQAFDLEAEGHQVNLAALERIHRHKTGALIRAAVRLGALAAGDAGRDALPYLDRY 212

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 213 ANAIGLAFQVQDDILDVVGD 232


>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
          Length = 351

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 113/196 (57%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK++R  L      L   +  TA+    +IE IH  SL+HDDLP MD
Sbjct: 86  KIHESMRYSLLAGGKRVRPMLCLAACELVGGHPSTAMPAACSIEMIHTMSLMHDDLPCMD 145

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N ++RRG PT HI + E  A++AG+ LL Y+FE +++    +      +++  L   I  
Sbjct: 146 NDHLRRGHPTNHIVFGEDVAVLAGDALLAYSFEYLATATEGVLPERIVRVIAELAKCIRS 205

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G+L GQ++DI  E + E     +  I   KT AL+  +   GAI+   +  E ERLR F
Sbjct: 206 EGLLAGQVVDICSEGVSEIGLEHLEYIHLHKTAALLEGSVVLGAILGGGNDEEVERLRKF 265

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 266 ARCIGLLFQVVDDILD 281


>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
          Length = 372

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK++R  L      L      TA+    A+E IH  SLIHDDLP MD
Sbjct: 107 KIHESMRYSLLAGGKRVRPMLCIAACELVGGLESTAMPSACAVEMIHTMSLIHDDLPCMD 166

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  Y E  A++AG+ LL ++FE ++     +  +   +++  L   IG 
Sbjct: 167 NDDLRRGKPTNHKIYGEDVAVLAGDALLAFSFEHVAKSTKGVSSDRIVRVIGELAKCIGS 226

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + E     +  I   KT AL+  +   GAI+  A   + E+LR F
Sbjct: 227 EGLVAGQVVDISSEGMTEVGLEHLEFIHVHKTAALLEASVVLGAIVGGADDEDVEKLRKF 286

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 287 ARCIGLLFQVVDDILD 302


>gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
 gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
          Length = 297

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 7/212 (3%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + +   + YA L GGK++R FL+     L N N    ++   A+E IH YSL+HD
Sbjct: 25  ELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H  + E   I+ G+ LLTYAF ++S    +   + +   ++S 
Sbjct: 85  DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLEFLSSEQLVNIISK 144

Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T    G+ GM+GGQM+DI+ E   I    +  I   KTG L+    E   I+A+  ++++
Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIANVEKDKR 204

Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           + L  + + +G+ FQ+ DD+LD E   EDL K
Sbjct: 205 KVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236


>gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
          Length = 295

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 5/196 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y+LL GGK+IR  L               + V  A+EC+H YSLIHDDLP+MDN
Sbjct: 33  LYKAMNYSLLAGGKRIRPILFLAALEALGKESSVYMDVACALECVHSYSLIHDDLPAMDN 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT H  + E  AI+AG+GLLT+AFE+++  +    + I + + + L H  G  
Sbjct: 93  DDLRRGKPTNHRVFGEGMAILAGDGLLTFAFELLARQRVADAEKIGACIRV-LAHAAGPA 151

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           GM+GGQ  D+  E    I    + ++ + KTG +         I+A A    ++ L+ + 
Sbjct: 152 GMVGGQAYDLLSEGHGDIGTEGLKLMHRGKTGVIFEAVMSMAGILAAAPAAVRQVLQAYA 211

Query: 215 ENLGIIFQLADDLLDC 230
           E LG+ FQ+ DD+LD 
Sbjct: 212 EQLGLTFQITDDILDA 227


>gi|62179034|ref|YP_215451.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62126667|gb|AAX64370.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|322713495|gb|EFZ05066.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 299

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 121/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L   AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHIKFGEANAILAGDALQALAFAIISDAPMPEVADRDRIAMIAELAN 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDRYAESIGLAFQVQDDILDVVGD 231


>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
 gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
          Length = 309

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 18/233 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + LQ+  K  +T LD  +          + +++  ++RY+LL GGK++R  L      
Sbjct: 18  LAAYLQKRKKLCETALDQAI-------PVIYPEKIYESMRYSLLAGGKRLRPILCLAACE 70

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +       A+    A+E IH  SLIHDDLP+MDN   RRG+ T H  Y +  AI+AG+GL
Sbjct: 71  MIGGTISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGL 130

Query: 124 LTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           L YAFE ++   TQ  +N+      Q++  L   +G  G++GGQ++D+  E    I    
Sbjct: 131 LAYAFEFVA---TQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLET 187

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  I   KT AL+  +   G I+A AS    +RL  + +N+G+ FQ+ DD+LD
Sbjct: 188 LNFIHNHKTAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILD 240


>gi|260583700|ref|ZP_05851448.1| geranyltranstransferase [Granulicatella elegans ATCC 700633]
 gi|260158326|gb|EEW93394.1| geranyltranstransferase [Granulicatella elegans ATCC 700633]
          Length = 294

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 110/196 (56%), Gaps = 5/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+ YA   GGK+IR  LV   + L  V     L V A++E IH YSLIHDDLP MD
Sbjct: 29  RLKEAMLYACSSGGKRIRPLLVLLISHLEEVELQKVLPVAASLEMIHTYSLIHDDLPGMD 88

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGK TVH Q+DE TAI+AG+ LLT  FE ++  + QL D  + + +  L    G 
Sbjct: 89  NDDYRRGKLTVHKQFDEATAILAGDALLTLTFEELA--QCQLSDAKKVRAIQVLGSASGA 146

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQM DI  E  + T  Q+  I   KTG L+  A   G ++   +   +E L  FG
Sbjct: 147 SGMITGQMRDIASEHQEITLEQLKQIHADKTGQLLLAAIRLGLLVLEDATPYEEALLKFG 206

Query: 215 ENLGIIFQLADDLLDC 230
            + G+ FQ+ +DL D 
Sbjct: 207 VHFGLAFQIQNDLQDV 222


>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 296

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F+      
Sbjct: 10  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLG 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 68  VGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L      G +GM+GGQ+ D++ E     IDE +   I K KTG 
Sbjct: 128 AYGQKEISAEKKVRLVLEFAKAAGPEGMVGGQVADMEAEGKQLTIDELE--YIHKHKTGK 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 186 LLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229


>gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101]
 gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101]
          Length = 290

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 7/202 (3%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++N  L  ++ Y++ +GGK+IR  L+     ++  ++   L    AIE IH YSLIHDDL
Sbjct: 23  EYNKVLYDSMAYSVNVGGKRIRPILMLLSYYIYKSDYKKILTPAIAIEMIHTYSLIHDDL 82

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E  A++AG+ LL  A +I+      L++ I +     +  
Sbjct: 83  PCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVD--YSLEEGISALKATKIIA 140

Query: 153 N-IGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208
           +  G  GM+GGQ++DI +E  +E  +  +  M   KTG L+  +  SGAI+A AS+ + +
Sbjct: 141 DAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAILAEASERDIK 200

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
           +L  FG  LG+ FQ+ DD+LD 
Sbjct: 201 KLEDFGYKLGLAFQIKDDILDV 222


>gi|8272412|dbj|BAA96458.1| farnesyl diphosphate synthase [Rhodobacter capsulatus]
          Length = 288

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 130/227 (57%), Gaps = 12/227 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           S+R+  + D +    A+ +       L  A+ YA  GGK++R+FL  E A++  ++   A
Sbjct: 3   SERLKEVQDGVEAAMAAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAIHGISMEQA 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    A+E +H YSL+HDD+P MDN  +RRG PTVH ++DE TA++AG+ L T AFE+ +
Sbjct: 63  MPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHRKWDEATAVLAGDALQTLAFELCT 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTG 186
            P     +N R  L+ +L    G +GM+ GQ LDI  E       +DE  +  +Q  KTG
Sbjct: 123 DPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDE--IIRLQAGKTG 179

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AL+ FA ++    A  +  ++  L  +   LG+ FQ+ADD+LD E D
Sbjct: 180 ALISFAAQA---GAIIAGADRALLAAYATALGLAFQIADDILDVEGD 223


>gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
           lactis subsp. lactis CV56]
          Length = 285

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 16/219 (7%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77
           L+D L  T  +   +    L  + +Y+LL GGK+IR  L       F++    A   V A
Sbjct: 8   LEDFL--TEFYESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ L    F I+S+    
Sbjct: 66  ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTA--- 122

Query: 138 LKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCF 191
              ++ ++++++LT  +    G  GM+ GQ+LD+  E  + T  ++  I ++KTG L+ F
Sbjct: 123 ---DLSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTF 179

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +  I+A  S +E E+LR  G+ LG+ FQ+ DD+LD 
Sbjct: 180 PFVAAGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDV 218


>gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
 gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
 gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
 gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
 gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
 gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
          Length = 290

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 7/214 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D  L+   +   ++N  L  ++ Y++ +GGK+IR  L+     ++  ++   L    AIE
Sbjct: 11  DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +I+      L++
Sbjct: 71  MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVD--YSLEE 128

Query: 141 NIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196
            I + +    +    G  GM+GGQ++DI +E  +E  +  +  M   KTG L+  +  SG
Sbjct: 129 GISALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSG 188

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A++A AS+ + ++L  FG  LG+ FQ+ DD+LD 
Sbjct: 189 AVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDV 222


>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 293

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 9/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           K +D  L+ L+    +  Q  H      A+RY++  GGK++R  L    A +F V  L A
Sbjct: 10  KDVDEALERLIPAEDTFPQEIHR-----AVRYSVFAGGKRLRPLLTLAAAEIFGVPRLHA 64

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    AIE +H YSLIHDDLP++D+   RRG+ + H  + +  AI+AG+ LLT AFE ++
Sbjct: 65  LPAACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAFETLA 124

Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           +  T         +L  +L    G+ GM+GGQ++D+  E   ++   +  I + KTGAL 
Sbjct: 125 AEATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHKTGALF 184

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               +SGAIM  AS  E +RL  F +N+G+ FQ+ DD+LD   D
Sbjct: 185 TCCIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGD 228


>gi|281491351|ref|YP_003353331.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375092|gb|ADA64610.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus
           lactis subsp. lactis KF147]
          Length = 285

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 16/219 (7%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77
           L+D L  T  +   +    L  + +Y+LL GGK+IR  L       F++    A   V A
Sbjct: 8   LEDFL--TEFYESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ L    F I+S+    
Sbjct: 66  ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTA--- 122

Query: 138 LKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCF 191
              ++ ++++++LT  +    G  GM+ GQ+LD+  E  + T  ++  I ++KTG L+ F
Sbjct: 123 ---DLSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTF 179

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +  I+A  S +E E+LR  G+ LG+ FQ+ DD+LD 
Sbjct: 180 PFVAAGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDV 218


>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
           Complex With Ggpp
 gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
           Complex With Ggpp
          Length = 293

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 7/195 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A RY+LL GGK++R  L      L       A     A+E IH  SLIHDDLP  DN  +
Sbjct: 43  AXRYSLLAGGKRVRPVLCIAACELVGGEESLAXPAACAVEXIHTXSLIHDDLPCXDNDDL 102

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGM 159
           RRGKPT H  Y E  A++AG+ LL++AFE ++S  +      R  + +  L   IG +G+
Sbjct: 103 RRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGL 162

Query: 160 LGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           + GQ++DI  E +D   V +     I   KT AL+  +   G I+   S  E ERLR F 
Sbjct: 163 VAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFA 222

Query: 215 ENLGIIFQLADDLLD 229
             +G++FQ+ DD+LD
Sbjct: 223 RCIGLLFQVVDDILD 237


>gi|52425115|ref|YP_088252.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307167|gb|AAU37667.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 300

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 121/201 (60%), Gaps = 6/201 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++Y LL GGK+IR FLV     +   +        AAIE IH YSLIHDDLP+MDN
Sbjct: 37  LADAMKYGLLLGGKRIRPFLVYATGRMLGADTAQLDYAAAAIEAIHAYSLIHDDLPAMDN 96

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+PT HI +D  TAI+AG+ L  +AFEI++   T L    + +L+  L+HN G+ 
Sbjct: 97  DSLRRGQPTCHIAFDHATAILAGDALQAFAFEILTK-STALSAEQKLRLIQVLSHNSGVF 155

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKE-RLRCF 213
           GM  GQ LD+  E   I  +++  I + KTGAL+  A + G I  +H + N  E +L  +
Sbjct: 156 GMCLGQSLDLISEHKQISLSELEQIHRNKTGALLSAALKMGFICSSHFADNALEAKLDRY 215

Query: 214 GENLGIIFQLADDLLDCEEDL 234
              +G+ FQ+ DD+LD E DL
Sbjct: 216 AAAIGLAFQVQDDILDIEGDL 236


>gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980]
 gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980]
          Length = 296

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 29  SHMQTQHNDRLL-SAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCY 85
           S +     DR L  A+ Y++  GGK+IR  L+    + F+    +   +V AA+E +H Y
Sbjct: 20  SFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTY 79

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS     L  + +  
Sbjct: 80  SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGHSPKLL 137

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  +G I+A   
Sbjct: 138 LLQQLAVCAGAQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQP 197

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
           +     L+   E+LG+ FQ+ DDLLD 
Sbjct: 198 EEILLLLQRLAEHLGLAFQIRDDLLDV 224


>gi|227113448|ref|ZP_03827104.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 303

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 14/234 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L +  Q  ++ +   + DL  Q++          L++A+ Y +LLGGK++R FLV     
Sbjct: 8   LNAHYQRTNRMLGHFIADLPFQSSP---------LVNAMEYGSLLGGKRLRPFLVYTTGE 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF +   +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ L
Sbjct: 59  LFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDAL 118

Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            T AF I++ +P  Q+ D  R  ++  L H  G+ GM GGQ  D++ E   +D   +  I
Sbjct: 119 QTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQAFDLEAEGHQVDLAALERI 178

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + KTGAL+  A   GA+ A    ++    L  +   +G+ FQ+ DD+LD   D
Sbjct: 179 HRHKTGALIRAAVRLGALAAGETGRDALPHLDRYANAIGLAFQVQDDILDVVGD 232


>gi|152979918|ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
 gi|151279995|gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
          Length = 280

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 118/206 (57%), Gaps = 8/206 (3%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            Q   RL  A+ YA+L GGK++R  LV    +LF+ +     R  AA+E IH YSL+HDD
Sbjct: 13  AQTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDD 72

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +P MD+  +RRGKPTVH++YDE  A++ G+ L + AF++++       D +R   M+ L 
Sbjct: 73  MPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGL---DPVRQLAMVRLL 129

Query: 152 HNI-GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEK 207
               G  GM GGQ +D+    +  +  ++  + ++KTGAL+  +   GA+   A S  E 
Sbjct: 130 AKASGSLGMCGGQAIDLASVGLSLSLEELEQMHRLKTGALLRVSVLLGALAGKALSAEET 189

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           + L  +   +G+ FQ+ DD+LD   D
Sbjct: 190 QALDSYAAAIGLAFQVVDDVLDATAD 215


>gi|332992374|gb|AEF02429.1| geranyltranstransferase [Alteromonas sp. SN2]
          Length = 296

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 129/227 (56%), Gaps = 14/227 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           Q+    ++T++DDL              RL  A+R+ALL GGK++R  LV    +  +V 
Sbjct: 12  QQTDTSLNTLIDDL---------PHDAPRLKEAMRHALLVGGKRMRPLLVQVIGNTLDVP 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +  AIEC+H YSL+HDDLP+MD+  +RRG+PT HI +DE TAI+AG+ L   AF
Sbjct: 63  KGDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGQPTCHIAFDEATAILAGDALQALAF 122

Query: 129 EIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
             ++ +P +    N R +L+  L    G +GM GGQ +D+    E I   Q+  +  +KT
Sbjct: 123 STLADAPLSDFATNKRGELLSVLARAAGYRGMCGGQAIDLTSTGEEISLEQLKRLHNLKT 182

Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           GAL+    E  +I++     N K  L  + +++G+ FQ+ DD+LD E
Sbjct: 183 GALLRACVEMVSIVSQDLDSNSKADLLAYADDIGLAFQVQDDILDVE 229


>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
          Length = 310

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 124/227 (54%), Gaps = 14/227 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+ +  +++  LD         +  +  + L  ++RY+LL GGK++R  L      L   
Sbjct: 23  LEASRLKVEAALD-------GSLGPERPESLRESMRYSLLAGGKRLRPILCLAACELAGG 75

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+    A+E IH  SLIHDDLP+MDN  +RRG PT H  Y E  AI+AG+ LLT A
Sbjct: 76  DSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRA 135

Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           FE+++  SP    +  ++    LSL    G  G++GGQ++D++ E   +D   +  I   
Sbjct: 136 FEMVALRSPGVPAEQLLKVVGELSLAS--GAPGLVGGQVVDLECEGKNVDLETLEYIHLH 193

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTGAL+     +GA++A A     E LR +   +G+ FQ+ DD+LD 
Sbjct: 194 KTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDV 240


>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
          Length = 300

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 118/204 (57%), Gaps = 16/204 (7%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  L      +            AA+E IH YSL+HDDLP MD
Sbjct: 36  RLHQAMRYAVLGGGKRVRPLLCYAAGEVSGAELERLSTAAAALELIHVYSLVHDDLPCMD 95

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS------SPKTQLKDNIRSQLMLSL 150
           +  +RRGKPT H++YDE TA++AG+ L + AF++++      SP+TQL+      ++  L
Sbjct: 96  DDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEYRVADSPQTQLR------MLEHL 149

Query: 151 THNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEK 207
               G +GM GGQ +D++   + +   ++  +   KTGAL+  +   GA    A +  + 
Sbjct: 150 ARAAGSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVILGANCGRALASKDM 209

Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
           +RL  F + +G+ FQ+ DD+LD +
Sbjct: 210 DRLDHFAKRIGLAFQVVDDVLDAQ 233


>gi|322372793|ref|ZP_08047329.1| geranyltranstransferase [Streptococcus sp. C150]
 gi|321277835|gb|EFX54904.1| geranyltranstransferase [Streptococcus sp. C150]
          Length = 290

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 6/201 (2%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSM 95
            L+SAI Y++  GGK+IR  +  +    F +    +   V A++E IH  SLIHDDLP+M
Sbjct: 25  ELISAILYSVDGGGKRIRPLIFLDLLEGFGLELTDSHFDVAASLEMIHTGSLIHDDLPAM 84

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRG  T H ++DE TAI+AG+ L    F++++  +T+L   IR +L+ +L+H  G
Sbjct: 85  DNDDYRRGCLTNHKKFDEATAILAGDSLFLDPFDLLA--QTELSAEIRVELIQALSHASG 142

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+GGQMLD++ E   +D +Q+  I + KTG L+ F   +  I+A       + L+  
Sbjct: 143 TFGMVGGQMLDMKGEGQELDLSQLAQIHEHKTGKLLTFPFVAAGIVAQQGLEVLDNLQEA 202

Query: 214 GENLGIIFQLADDLLDCEEDL 234
           G+ +G+ FQ+ DD+LD   D 
Sbjct: 203 GQLIGLAFQVRDDILDVTADF 223


>gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
          Length = 365

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 114/199 (57%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   ++  A+RY+LL GGK++R  L      +   +   A+    A+E IH  SL+HDDL
Sbjct: 97  QEPIKVHEAMRYSLLAGGKRVRPILCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDL 156

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E TA++AG+ LL+ AFE +++    +      Q +  L  
Sbjct: 157 PCMDNDDLRRGKPTNHKIFGENTAVLAGDALLSLAFEHVATKTQNVPPQRVVQAIGELGS 216

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G +G++ GQ++D+  E   +  T++  I   KT  L+  A   GAIM   ++ + ER+
Sbjct: 217 AVGSEGLVAGQIVDLASEGKQVSLTELEYIHHHKTSKLLEAAVVCGAIMGGGNEVDVERM 276

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +   +G++FQ+ DD+LD
Sbjct: 277 RSYARCIGLLFQVVDDILD 295


>gi|62959233|gb|AAY23724.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-435]
          Length = 145

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 93/145 (64%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +R GKPT+H  +DE TA++AG+ L   AF+I++ P T      R++L+ 
Sbjct: 1   HDDLPGMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60

Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G +GM GGQM+DI  +++  D  QV  +Q++KTGAL+  + E GA++       
Sbjct: 61  TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPEG 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +  LR +  ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145


>gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
 gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
 gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
 gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
          Length = 290

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 124/214 (57%), Gaps = 7/214 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D  L+   +   ++N  L  ++ Y++ +GGK+IR  L+     ++  ++   L    AIE
Sbjct: 11  DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLK 139
            IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +I +     + K
Sbjct: 71  MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGK 130

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196
             +++  +++     G  GM+GGQ++DI +E  +E  +  +  M   KTG L+  +  SG
Sbjct: 131 SALKATKIIA--DAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSG 188

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A++A AS+ + ++L  FG  LG+ FQ+ DD+LD 
Sbjct: 189 AVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDV 222


>gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
 gi|167663987|gb|EDS08117.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
          Length = 314

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 128/234 (54%), Gaps = 16/234 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + ++++   ++I+ IL + L +     Q      ++ A+ Y+LL GGK++R  L+ E   
Sbjct: 21  MQAQMKHKVEKIEGILTEYLPR-----QEGFQSIIMEAMNYSLLAGGKRLRPMLMNETYR 75

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF           AAIE IH YSL+HDDLP+MDN   RRG+ T HI Y E   I+AG+ L
Sbjct: 76  LFGGESPLIRPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDAL 135

Query: 124 LTYAFE-----IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQ 176
           L YAFE      +  P+  L   +  + +  L    G+ GM+GGQ++D+++    I +  
Sbjct: 136 LNYAFETAFKAFVMEPEESL---LIGRALGVLGEKAGIYGMIGGQVIDVKETGHSIPKEV 192

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +  I ++KT AL+  +   GAI+  AS+ E + +      +GI FQ+ DD+LD 
Sbjct: 193 LDTIYELKTSALIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQDDILDV 246


>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
           str. MIT 9202]
 gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
           str. MIT 9202]
          Length = 300

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 116/199 (58%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ + L  ++RY+LL GGK+IR  L     SL       A+    AIE IH  SLIHDDL
Sbjct: 33  ENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGKPSLAVPTAVAIEMIHTMSLIHDDL 92

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN  +RRG+PT H  Y +  AI+AG+ LLT AFE++S     +       ++  L+ 
Sbjct: 93  PAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSL 152

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G  G++GGQ++D++ E   +D   +  I   KTGAL+     +GA++A A++   + L
Sbjct: 153 VAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANEKLLQAL 212

Query: 211 RCFGENLGIIFQLADDLLD 229
             + E +G+ FQ+ DD+LD
Sbjct: 213 TTYAEGIGLAFQIIDDILD 231


>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 300

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 116/199 (58%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ + L  ++RY+LL GGK+IR  L     SL       A+    AIE IH  SLIHDDL
Sbjct: 33  ENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDL 92

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN  +RRG+PT H  Y +  AI+AG+ LLT AFE++S     +       ++  L+ 
Sbjct: 93  PAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVIGELSL 152

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G  G++GGQ++D++ E   +D   +  I   KTGAL+     +GA++A A++   + L
Sbjct: 153 VAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGAMIAGANEKLLQAL 212

Query: 211 RCFGENLGIIFQLADDLLD 229
             + E +G+ FQ+ DD+LD
Sbjct: 213 TTYAEGIGLAFQIIDDILD 231


>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
 gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
          Length = 296

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L S++ Y+L  GGK++R  LV    + +  N    + VG A+E IH YSLIHDDLP MD+
Sbjct: 33  LKSSMLYSLKAGGKRLRPVLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPT H  Y E TA++AG+ LLT +F +I+S   + +  + + +++  L  + G 
Sbjct: 93  DDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGA 152

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ  D++ E   +   ++  I   KTG L+ F+  +GA++A AS ++ E+LR F 
Sbjct: 153 LGMVGGQFDDMEAEQKQVSLAELEYIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFS 212

Query: 215 ENLGIIFQLADDLLDCE 231
            ++GI FQ+ DD+LD E
Sbjct: 213 YHIGIAFQIRDDILDLE 229


>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
          Length = 366

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP MDN  +
Sbjct: 105 AMRYSLLAGGKRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDL 164

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  Y E  A++AG+ LL +AFE I++    +  +     +  L  +IG +G++
Sbjct: 165 RRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLV 224

Query: 161 GGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ+ DI    +  +    +  I   KT AL+  +   GAI+   +  E E+LR F   +
Sbjct: 225 AGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCI 284

Query: 218 GIIFQLADDLLD 229
           G++FQ+ DD+LD
Sbjct: 285 GLLFQVVDDILD 296


>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 306

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 124/230 (53%), Gaps = 14/230 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
            P+ L      ++  LDD        +  +  ++L  A+RY+LL GGK++R  L      
Sbjct: 17  FPAYLAAAKASVEEALDD-------SLGPERPEQLREAMRYSLLAGGKRLRPILCLAACE 69

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       AL    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ L
Sbjct: 70  LAGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDAL 129

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LT +FE+++  SP    +  ++    LSL    G  G++GGQ++D++ E   +D   +  
Sbjct: 130 LTRSFEMVALRSPGVPPERLLKVVGELSLVA--GAPGLVGGQVVDLECEGKEVDLETLEF 187

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I   KTGAL+      GA++  A  +  + LR +   +G+ FQ+ DD+LD
Sbjct: 188 IHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILD 237


>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
          Length = 367

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 10/224 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++ + K+I+  LD+ +         Q    +  A+RY+LL GGK++R  L      L   
Sbjct: 80  MKTSGKKINKALDEAV-------PVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGG 132

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+ +  A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E TAI+AG+ LL+ A
Sbjct: 133 LESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSLA 192

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185
           FE ++     +      + +  L   +G QG++ GQ++DI  Q + +D   +  I   KT
Sbjct: 193 FEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHVHKT 252

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L+  +   GAI+   +  E ERLR +   +G++FQ+ DD+LD
Sbjct: 253 SKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILD 296


>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Bacillus pumilus ATCC 7061]
 gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Bacillus pumilus ATCC 7061]
          Length = 296

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 4/197 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L S++ Y+L  GGK++R  LV    + +  N    + VG A+E IH YSLIHDDLP MD+
Sbjct: 33  LKSSMLYSLKAGGKRLRPVLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPT H  Y E TA++AG+ LLT +F +I+S   + +  + + +++  L  + G 
Sbjct: 93  DDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGA 152

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ  D++ E   +   ++  I   KTG L+ F+  +GA++A AS ++ E+LR F 
Sbjct: 153 LGMVGGQFDDMEAEQKQVSLAELESIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFS 212

Query: 215 ENLGIIFQLADDLLDCE 231
            ++GI FQ+ DD+LD E
Sbjct: 213 YHIGIAFQIRDDILDLE 229


>gi|296159644|ref|ZP_06842467.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1]
 gi|295890088|gb|EFG69883.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1]
          Length = 293

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 120/224 (53%), Gaps = 11/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++T L+  L   A+   T H      A+RYA+LGG K++R  L      L        
Sbjct: 12  ERVETALEHYLPGEATEPATLHE-----AMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  ++
Sbjct: 67  DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALT 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
           S    L    ++ L+  L    G  GM GGQ +D+      +  TQ+  + +MKTGAL+ 
Sbjct: 127 S--EVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184

Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
            A   GA+       +  R L  +   +G+ FQ+ DD+LD   D
Sbjct: 185 AAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTD 228


>gi|254191045|ref|ZP_04897550.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
 gi|254301703|ref|ZP_04969146.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
 gi|157811595|gb|EDO88765.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
 gi|157938718|gb|EDO94388.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
          Length = 362

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 9/199 (4%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +A+RYA+ GG K++R  L      L + +     +V A IE IH +SLI DDLP+MDN
Sbjct: 98  LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 157

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R G+ T+H QYD  TA++A +GL++ AF  +S  +  L  ++R  LM  L  +IG  
Sbjct: 158 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALS--EAPLPLDVRVALMRELASSIGPS 215

Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----KERLR 211
           G+ GGQ +D+      +D T++  + +MKTGAL+  A   G +       E       + 
Sbjct: 216 GLTGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVS 275

Query: 212 CFGENLGIIFQLADDLLDC 230
            +GE LG+ +Q+ DD+LD 
Sbjct: 276 EYGERLGLAYQVVDDILDS 294


>gi|292659826|pdb|3M0G|A Chain A, Crystal Structure Of Putative Farnesyl Diphosphate
           Synthase From Rhodobacter Capsulatus
 gi|292659827|pdb|3M0G|B Chain B, Crystal Structure Of Putative Farnesyl Diphosphate
           Synthase From Rhodobacter Capsulatus
          Length = 297

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 127/225 (56%), Gaps = 12/225 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           S+R+  + D +    A+ +       L  A  YA  GGK++R+FL  E A++  ++   A
Sbjct: 4   SERLKEVQDAVETAXAAAIGRLPAGDLRDAXAYAAQGGKRLRAFLAIESAAIHGISXAQA 63

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                A+E +H YSL+HDD P  DN  +RRG PTVH ++D+ TA++AG+ L T AFE+ +
Sbjct: 64  XPAALAVEALHAYSLVHDDXPCXDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCT 123

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE------FIDETQVFMIQKMKTG 186
            P     +N R  L+ +L    G +G + GQ LDI  E       +DE  +  +Q  KTG
Sbjct: 124 DPVLGSAEN-RVALVAALAQASGAEGXVYGQALDIAAETAAVPLTLDE--IIRLQAGKTG 180

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           AL+ FA ++GAI+A A +     L  +   LG+ FQ+ADD+LD E
Sbjct: 181 ALISFAAQAGAILAGADRGP---LTAYATALGLAFQIADDILDVE 222


>gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15]
 gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15]
          Length = 296

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 7/207 (3%)

Query: 29  SHMQTQHNDRLL-SAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCY 85
           S +     DR L  A+ Y++  GGK+IR  L+    + F+    +   +V AA+E +H Y
Sbjct: 20  SFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTY 79

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS     L  + +  
Sbjct: 80  SLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISM--AHLGHSPKLL 137

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  +G I+A   
Sbjct: 138 LLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQP 197

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
           +     L+   E+LG+ FQ+ DDLLD 
Sbjct: 198 EEILLLLQRLAEHLGLAFQIRDDLLDV 224


>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
           subsp. sativus]
          Length = 367

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 10/224 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++ + K+I+  LD+ +         Q    +  A+RY+LL GGK++R  L      L   
Sbjct: 80  MKTSGKKINKALDEAV-------PVQKPAIIHEAMRYSLLAGGKRVRPVLCIASCELVGG 132

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+ +  A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E TAI+AG+ LL+ A
Sbjct: 133 LESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSLA 192

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185
           FE ++     +      + +  L   +G QG++ GQ++DI  Q + +D   +  I   KT
Sbjct: 193 FEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHVHKT 252

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L+  +   GAI+   +  E ERLR +   +G++FQ+ DD+LD
Sbjct: 253 SKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILD 296


>gi|323464391|gb|ADX76544.1| geranyltranstransferase [Staphylococcus pseudintermedius ED99]
          Length = 296

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 134/230 (58%), Gaps = 18/230 (7%)

Query: 14  KRIDTILDDLLLQTASHMQ-----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           K ++  L++LL Q   H+      +Q    L  ++RY+L  GGK+IR  L+     + + 
Sbjct: 2   KVMNQNLNELLEQFNGHLNHAIEDSQLGTSLEQSMRYSLEAGGKRIRPLLMLATIKMLDH 61

Query: 68  NHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             L + + V  A+E IH YSLIHDDLP+MD+  +RRGKPT H  Y E  AI+AG+ LLT 
Sbjct: 62  QKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAILAGDALLTK 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF--IDETQVFMI 180
           AFE I+     L  +I +Q+ ++L   I    G QGM+GGQ LD+Q E   I   ++  I
Sbjct: 122 AFEKIA-----LTPHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEKLESI 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              KTGAL+ FA E+  I+    Q   ++L  F ++LG+IFQ+ DDLLD 
Sbjct: 177 HIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDV 226


>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
          Length = 299

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 124/226 (54%), Gaps = 14/226 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L++   R++  LD       + +  +  ++L  ++RY+LL GGK++R  L      L   
Sbjct: 14  LEKARTRVEDALD-------ASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGG 66

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL    A+E IH  SLIHDDLPSMDN  +RRG+PT H  Y +  AI+AG+ LLT A
Sbjct: 67  ELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRA 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185
           FE++S     +      +++  L+   G  G++GGQ++D+  + + +D   +  I   KT
Sbjct: 127 FEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKT 186

Query: 186 GALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GAL+  C  C  GA++  A +   E L  +   +G+ FQ+ DD+LD
Sbjct: 187 GALLKACVTC--GALIGGADEKLLEALSIYARGIGLAFQIIDDILD 230


>gi|327398343|ref|YP_004339212.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
 gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
          Length = 291

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 111/198 (56%), Gaps = 11/198 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR+ LV   A +F  +   +L + +AIE +H YSLIHDDLP MDN   RRGKP  H
Sbjct: 40  GGKRIRAMLVMCAADMFGADETKSLHIASAIELMHAYSLIHDDLPVMDNDDFRRGKPANH 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             Y E  A++ G+GL TY F +I+     + D  + +++  L++N G+ GM+ GQ++D+ 
Sbjct: 100 KVYGEDLALLVGDGLNTYTFNVIAD--APIDDARKVKIVKWLSNNAGIGGMVVGQVVDVL 157

Query: 168 --QDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             +D     +    V  I K KT  L+  +   GAI  +    + +RL  +G   G+ FQ
Sbjct: 158 SSRDRLKGHSHKKLVNFIHKHKTAKLIQASVVCGAICGNPDDVQLDRLAKYGLYAGVAFQ 217

Query: 223 LADDLLDC---EEDLPKK 237
           + DD LD    EE L KK
Sbjct: 218 IIDDYLDVVGDEEKLGKK 235


>gi|323700415|ref|ZP_08112327.1| Polyprenyl synthetase [Desulfovibrio sp. ND132]
 gi|323460347|gb|EGB16212.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
          Length = 297

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 124/196 (63%), Gaps = 14/196 (7%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RLL+++ Y+LL GGK++R  LV     L   +   A+   A++ECIH YSLIHDDLP+MD
Sbjct: 30  RLLASMEYSLLAGGKRLRPVLVLAWNGLLGGDADKAMPFAASMECIHTYSLIHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS----LTH 152
           +  +RRG+P+ H Q+DE TAI+AG+GLLT AF +++  +T L   + ++ +L     L  
Sbjct: 90  DDDLRRGRPSNHKQFDEATAILAGDGLLTEAFVLMT--ETCLVKGLPAERVLRAIAVLAR 147

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEK 207
             G  GM+GGQ +D+  E    T V +     +  MKTGAL+  ACE GAI+A A++++ 
Sbjct: 148 AAGSGGMVGGQAVDM--ELTGRTGVPLDELKKMHAMKTGALLTAACECGAILAGAAESDV 205

Query: 208 ERLRCFGENLGIIFQL 223
           +  R FG  +G+ FQ+
Sbjct: 206 DNARRFGRKIGVAFQI 221


>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
 gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
          Length = 299

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 119/215 (55%), Gaps = 10/215 (4%)

Query: 26  QTASHM-QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           Q A +M Q   + RL  A+RY LLGG K+IR  L    A         AL    A+E IH
Sbjct: 23  QLADYMDQASASQRLQDAMRYGLLGGGKRIRPALCLAAAEAVGGQRQIALAPACALEMIH 82

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP+MDN  +RRG+ T HI +DE +AI+AG+ L   AF ++++   +L   ++
Sbjct: 83  AYSLMHDDLPAMDNDDLRRGRATAHIAFDESSAILAGDALQAEAFRVLAT-APRLSAEVK 141

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIM 199
             ++ +L +  G  GM+GGQ +D+  E +  T    Q+  + + KTGAL+  +   GA+ 
Sbjct: 142 LAMVKALANACGANGMVGGQAIDL--ESVARTLTLDQLENMHRHKTGALIEASVHLGALA 199

Query: 200 AHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
                    + L  +   LG+ FQ+ DDLLD E D
Sbjct: 200 GGVKDPALLDALARYARALGLAFQVQDDLLDIEGD 234


>gi|73654130|gb|AAZ79360.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-378]
          Length = 145

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 60/145 (41%), Positives = 93/145 (64%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +R GKPT+H  +DE TA++AG+ L   AF+I++ P T      R++L+ 
Sbjct: 1   HDDLPWMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60

Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G +GM GGQM+DI  +++  D  QV  +Q++KTGAL+  + E GA++       
Sbjct: 61  TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPEG 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +  LR +  ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145


>gi|148976608|ref|ZP_01813295.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium
           SWAT-3]
 gi|145963959|gb|EDK29217.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium
           SWAT-3]
          Length = 294

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 5/200 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  L++A+RY LL GGK+ R FLV     +            +A+ECIH YSLIHDDLP
Sbjct: 26  QNQNLINAMRYGLLLGGKRARPFLVYITGEMLGCTAEELDTPASAVECIHAYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTH 152
           +MD+  +RRG  T HI++DE TAI+ G+ L T AF I++        ++ R +++  L  
Sbjct: 86  AMDDDELRRGHQTCHIKFDEATAILTGDALQTLAFTILAEGTLSADGESNRVRMIQRLAE 145

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G QGM  GQ LDI+ E   +   ++  + + KTGALM  A   GA+ A     E   +
Sbjct: 146 ASGAQGMCIGQALDIEAENRAVTLKELEEVHRNKTGALMKSAIRLGALAAGEKAFEVLPQ 205

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  + + +G+ FQ+ DD+LD
Sbjct: 206 LDKYADAIGLAFQVQDDILD 225


>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
           V4]
 gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
           V4]
          Length = 300

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 106/191 (55%), Gaps = 3/191 (1%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           AI Y L  GGK++R  L    A     N   AL +  A+ECIH YSL+HDDLPSMDN   
Sbjct: 41  AIDYCLFSGGKRLRPILCLAGAHAVCRNSDCALPMACAVECIHTYSLVHDDLPSMDNDDF 100

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKP++H  Y E  AI+ G+ LL  AFE+ S      +    SQ++  L    G + ++
Sbjct: 101 RRGKPSLHKIYGEALAILTGDALLALAFEVASLCSPLGRTYPVSQMIWELARTAGSRALV 160

Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
            GQ+ D++ E   I  TQ+  I   KT AL+  +   GA+ A A +   + +  +G  LG
Sbjct: 161 AGQVADLEAEGKEIGLTQLRYIHCRKTAALITTSLRLGAMAADADKKTLDLITRYGRALG 220

Query: 219 IIFQLADDLLD 229
           + FQ+ DD+LD
Sbjct: 221 LAFQIIDDILD 231


>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
          Length = 381

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 7/202 (3%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++  ++  ++RY+LL GGK++R  L      L       A+    AIE IH  SL+HDDL
Sbjct: 111 RYPQKIYESMRYSLLAGGKRVRPVLCIAACELVGGTEELAIPTACAIEMIHTMSLMHDDL 170

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSL 150
           P +DN  +RRGKPT H  + E TA+ AGN L +YAFE   +S+ KT   D I  +++  L
Sbjct: 171 PCIDNDDLRRGKPTNHKIFGEDTAVTAGNALHSYAFEHIAVSTSKTVGADRIL-RMVSEL 229

Query: 151 THNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
               G +G++GGQM+DI    D  ID   +  I   KT  L+  +   GAI+  AS+   
Sbjct: 230 GRATGSEGVMGGQMVDIASEGDPSIDLQTLEWIHIHKTAMLLECSVVCGAIIGGASEIVI 289

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           ER R +   +G++FQ+ DD+LD
Sbjct: 290 ERARRYARCVGLLFQVVDDILD 311


>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
 gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
 gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
 gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
 gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
 gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
          Length = 294

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 121/209 (57%), Gaps = 12/209 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+RY++  GGK++R  L      L   +   AL V  AIE IH YSLIHDDLP+MDN
Sbjct: 30  IYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154
             +RRGKPT H  Y E  AI+AG+GLL   +E++     +  ++   + +L  T+ I   
Sbjct: 90  DDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDY--ERILKATNEIATA 147

Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G +G++GGQ++DI  Q+  +   ++  I + KT AL+  +  +GA +A A++ +   LR
Sbjct: 148 SGCKGIIGGQVVDILSQNTKLTYEELKFIHEHKTAALIEASVCAGAYIAGATEEDVHALR 207

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            +   +G  FQ+ DD+LD    EE L KK
Sbjct: 208 EYARLIGFAFQIKDDILDVIGEEEKLGKK 236


>gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
 gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
          Length = 290

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 124/214 (57%), Gaps = 7/214 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D  L+   +   ++N  L  ++ Y++ +GGK+IR  L+     ++  ++   L    AIE
Sbjct: 11  DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLK 139
            IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A ++ +     + K
Sbjct: 71  MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLEEGK 130

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196
             +++  +++     G  GM+GGQ++DI +E  +E  +  +  M   KTG L+  +  SG
Sbjct: 131 SALKATKIIA--DAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSG 188

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A++A AS+ + ++L  FG  LG+ FQ+ DD+LD 
Sbjct: 189 AVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDV 222


>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
 gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
          Length = 309

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 114/200 (57%), Gaps = 5/200 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + +++  A+RY+LL GGK++R  L      +       A+    A+E IH  SLIHDDLP
Sbjct: 41  YPEKIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIGMAMPTACAMEMIHTMSLIHDDLP 100

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152
           +MDN   RRGK T H  Y E  AI+AG+GLL  +FE +++   Q     R+ Q++  +  
Sbjct: 101 AMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFEFVATQTPQTVPPDRTLQVIARMGS 160

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             G  G++GGQ++D+  E    I    +  I   KT AL+  +   G I+A AS  + ++
Sbjct: 161 ASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHKTAALLEASVVCGGIIAGASPQDIQK 220

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L C+ +N+G+ FQ+ DD+LD
Sbjct: 221 LTCYSQNIGLAFQIIDDILD 240


>gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 341

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 7/202 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           L+ A+RYA+L GGK++R  LV       A L +     ALR   A+E IH YSL+HDD+P
Sbjct: 74  LVDAMRYAVLDGGKRLRPLLVLAAHEAVAELGHGCDAAALRAACAVELIHAYSLVHDDMP 133

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN  +RRGKPTVH+Q+ E +A++AG+ L   AFE ++     +   ++++L   L   
Sbjct: 134 CMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFEFLTPLDGSVPCTVQARLCGLLARA 193

Query: 154 IGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM GGQ +D+    +   E Q+  + ++KTGAL+  +   GA  A  +      L 
Sbjct: 194 AGSSGMAGGQAIDLASVGLPLTENQLREMHQLKTGALLQGSVVMGAQCAQPTAQVLSGLE 253

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +G  +G+ FQ+ DD+LD   D
Sbjct: 254 AYGAAIGLAFQVVDDILDVTAD 275


>gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 266

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 123/223 (55%), Gaps = 25/223 (11%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           RI+  L +LL+        Q    L  A+ Y L   GK++R  L    AS    +   A+
Sbjct: 10  RIEDRLRELLV-------PQQPQELFEAMAYYLFQPGKRVRPLLTVAVASSLGGDEEDAI 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            VG AIE IH YSLIHDDLP+MDN   RRG P+ H ++ E  A++AG+ LLTYAFE++S 
Sbjct: 63  TVGCAIEMIHNYSLIHDDLPAMDNDDFRRGLPSCHRKFGEAMAVLAGDALLTYAFELMS- 121

Query: 134 PKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI-QDEFIDETQVFMIQKMKTGAL 188
            K  +   +  + ++ L + I    G+ GM+GGQ LDI  +E ++E  +      KT AL
Sbjct: 122 -KEGVFRTLSPEEVVKLINTIAVKSGIGGMVGGQALDIGGEENLEEVNL-----KKTAAL 175

Query: 189 M--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              CF   SG I++H     KE L   G   G++FQL DD+LD
Sbjct: 176 FEACFI--SGGIVSHRGDLFKE-LEEVGREFGLLFQLVDDILD 215


>gi|119472098|ref|ZP_01614329.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Alteromonadales bacterium TW-7]
 gi|119445118|gb|EAW26411.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Alteromonadales bacterium TW-7]
          Length = 295

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 4/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A  Y+L  GGK++R FLV     +          + AAIECIH YSL+HDDLP+MD+  +
Sbjct: 35  ATHYSLFNGGKRLRPFLVYAVGEMLGAKKSDLDVLAAAIECIHSYSLVHDDLPAMDDDDL 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG PT HI Y E  AI+AG+ L T AFE+I++         + +++ +L H  G++GM+
Sbjct: 95  RRGYPTCHIVYGEAQAILAGDALQTLAFELIATHNFNCSAQSQVKMIAALAHASGIEGMV 154

Query: 161 GGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENL 217
            GQ LDI   D+ +   ++  I K+KTGAL+  A   GA+ +  A +   E L  FG  +
Sbjct: 155 AGQGLDIAATDKVVSVQELERIHKLKTGALINCAITLGALCSEKADEQTLENLSVFGYAI 214

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LD E D
Sbjct: 215 GLAFQVHDDILDVEGD 230


>gi|73662542|ref|YP_301323.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72495057|dbj|BAE18378.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 295

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 112/206 (54%), Gaps = 6/206 (2%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L  ++RY+L  GGK+IR  L+     +    +        A+E IH YSLIHDDLP 
Sbjct: 27  NTNLEESMRYSLEAGGKRIRPVLLLLTLEMLTDQYKKGFSSALALEMIHTYSLIHDDLPP 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  + E  AI+AG+ LLT AF++I +  + L D  + +L+  L+   
Sbjct: 87  MDNDDYRRGKLTNHKVFGEWKAILAGDALLTKAFDMIVNDDS-LNDVAKVKLIKRLSFAS 145

Query: 155 GLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           G  GM+GGQ LD+Q E     ID   +  I   KTGAL+ FA  +   +A         L
Sbjct: 146 GHLGMVGGQTLDMQSEGAETNIDLDTLEKIHNAKTGALLKFAVMAAVDIAEPENEVSNAL 205

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
             + E+LG++FQ+ DDLLD   D  K
Sbjct: 206 ESYSEHLGLMFQIKDDLLDIYGDEAK 231


>gi|99082761|ref|YP_614915.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040]
 gi|99039041|gb|ABF65653.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040]
          Length = 287

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 133/223 (59%), Gaps = 22/223 (9%)

Query: 27  TASHMQTQ-----HNDRLLS-------AIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           TA+ +Q Q     H DR L        A+ YAL GGK +R FLV E A L +V    A+ 
Sbjct: 6   TAALLQAQTQILNHMDRRLPQADLLHQAMDYALRGGKMLRGFLVLESARLHDVPETAAIE 65

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIECIH YSL+HDDLP+MD+  +RRG+PT+H ++DE TA++AG+ L T AFE+++  
Sbjct: 66  AALAIECIHAYSLVHDDLPAMDDDDLRRGQPTLHRKWDEATAVLAGDSLQTLAFELLA-- 123

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMC 190
           +  +  N  S L+ +L    G  GM+ GQM+DI  E  +      ++  +Q  KTG L+ 
Sbjct: 124 RDSVGPNALS-LIRTLAQAAGKDGMVSGQMMDIAAETAETPLTLDEITTLQARKTGCLIE 182

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++  +GA +A A   +   LR + + LG+ FQ+ADD+LD E D
Sbjct: 183 WSACAGARLAGA---DPAPLRHYAQALGLAFQIADDILDVEGD 222


>gi|329116734|ref|ZP_08245451.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020]
 gi|326907139|gb|EGE54053.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020]
          Length = 289

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 124/224 (55%), Gaps = 18/224 (8%)

Query: 26  QTASHMQTQHN---DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAI 79
           QT SH   + N     L+ +I Y++  GGK+IR   + E    FN+  LT    +V AA+
Sbjct: 9   QTISHFYQKSNLVSQDLIDSIIYSVDSGGKRIRPLFLLESLEAFNIT-LTEDHFKVAAAL 67

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SLIHDDLP+MDN   RRG+ T H Q+DE TAI+AG+ L    F +I+  +T   
Sbjct: 68  EMVHTGSLIHDDLPAMDNDEYRRGRLTNHKQFDEATAILAGDSLFIDPFSLIA--ETNFL 125

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACES 195
             ++  L+  L++  G  GM+GGQMLD++ E     I+E Q   I   KTG L+ +   +
Sbjct: 126 PQVKVDLIAQLSNAAGTFGMVGGQMLDMRAEDQKLGIEELQ--GIHSHKTGKLLAYPFMA 183

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            AI+A    +    L   GE +G  FQ+ DD+LD     EDL K
Sbjct: 184 AAIIAQLPADMISDLTRAGELIGHAFQVRDDILDITAKFEDLGK 227


>gi|227327511|ref|ZP_03831535.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 303

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+ Y +LLGGK++R FLV     LF ++  +     AA+ECIH YSLIHDDLP+MD+
Sbjct: 33  LVNAMEYGSLLGGKRLRPFLVYTTGELFGMSLESLDAPAAAVECIHAYSLIHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  AI+AG+ L T AF I++ +P  Q+ D  R  ++  L H  G+
Sbjct: 93  DDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRLAMISELAHASGV 152

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213
            GM GGQ  D++ E   +D   +  I + KTGAL+  A   GA+ A    +     L  +
Sbjct: 153 AGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALAAGETGRAALPHLDRY 212

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 213 ANAIGLAFQVQDDILDVVGD 232


>gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3]
 gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3]
          Length = 296

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 124/229 (54%), Gaps = 18/229 (7%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRY---------------ALLGGKKIRSFLVTECASLFNV 67
           LLL+T S  Q++ + +L   I                 ALLGGK+IR FLV     +   
Sbjct: 3   LLLKTLSQYQSRTDQQLTKYIDLQSPLCLSLNKAMYHGALLGGKRIRPFLVYVVGDMLGS 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              T   +  A+EC+H YSLIHDDLP+MD+  +RRG+ T HI + E  AI+AG+ L + A
Sbjct: 63  QLSTLDPIACALECMHAYSLIHDDLPAMDDDALRRGQATCHIVFGEAQAILAGDALQSLA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185
           F+I+S    +L  + + +++  L    G +GM  GQ LD+  +++ +D T +  I + KT
Sbjct: 123 FDILSQENKELSCSAQLKMLNVLAKASGDKGMCAGQALDLAAENKRVDLTMLESIHRAKT 182

Query: 186 GALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  A E   +      ++ K+ L  +   +G+ FQ+ DD+LD   D
Sbjct: 183 GALIQAAVELATLTKVGLDSQHKQYLLTYARAIGLAFQVQDDILDITSD 231


>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 306

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 10/228 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
            P+ L      ++  LDD        +  +  ++L  A+RY+LL GGK++R  L      
Sbjct: 17  FPAYLAAAKASVEEALDD-------SLGPERPEQLREAMRYSLLAGGKRLRPILCIAACE 69

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       AL    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ L
Sbjct: 70  LAGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDAL 129

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT +FE+++     +      +++  L+   G  G++GGQ++D++ E   +D   +  I 
Sbjct: 130 LTRSFEMVALRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIH 189

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             KTGAL+      GA++  A  +  + LR +   +G+ FQ+ DD+LD
Sbjct: 190 LHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILD 237


>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
          Length = 369

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP MDN  +
Sbjct: 108 AMRYSLLAGGKRVRPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDL 167

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  + E  A++AG+ LL YAFE ++     +      + +  L  +IG +G++
Sbjct: 168 RRGKPTNHKVFGEDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLV 227

Query: 161 GGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ++DI  E +      Q+  I   KT AL+  +   GAI+   +  + E LR F   +
Sbjct: 228 AGQVVDIDSEGLANVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCI 287

Query: 218 GIIFQLADDLLD 229
           G++FQ  DD+LD
Sbjct: 288 GLLFQAVDDILD 299


>gi|154686692|ref|YP_001421853.1| YqiD [Bacillus amyloliquefaciens FZB42]
 gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42]
          Length = 296

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 117/186 (62%), Gaps = 3/186 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V    + +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H
Sbjct: 44  GGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             + E  A++AG+GLLT +F++I+S  ++ +    R +L+  L    G +GM+GGQ  D+
Sbjct: 104 KVFGEAAAVLAGDGLLTESFKLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADM 163

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + E   I   ++  I + KT  L+ F+  +GAI+A A ++E E+LR F  ++GI FQ+ D
Sbjct: 164 EAEQKRITLEELESIHERKTAKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRD 223

Query: 226 DLLDCE 231
           D+LD E
Sbjct: 224 DILDIE 229


>gi|238760656|ref|ZP_04621781.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236]
 gi|238701121|gb|EEP93713.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236]
          Length = 306

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 119/200 (59%), Gaps = 7/200 (3%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L+ A+RY A+LGGK++R +LV     +F ++        AAIECIH YSLIHDDLP+
Sbjct: 36  NSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLSPTNLDAPAAAIECIHAYSLIHDDLPA 95

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT H+++ E  AI+AG+ L T AF I++ +P   + D  R  ++  L H 
Sbjct: 96  MDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAQAPMPDVADKDRLSMIAELAHA 155

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE--R 209
            G+ GM GGQ LD++ E   I    +  I + KTGAL+  A   GA  A   Q  K    
Sbjct: 156 SGVAGMCGGQALDLEAEARQISLEDLERIHRHKTGALIRAAVRLGAFAA-GEQGRKALTL 214

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  + E +G+ FQ+ DD+LD
Sbjct: 215 LDRYSEAIGLAFQVQDDILD 234


>gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
           pyrophosphate synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
           pyrophosphate synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 297

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 4/204 (1%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  + + +   + YA L GGK++R FL+     L N N    ++   A+E IH YSL+HD
Sbjct: 25  ELSYPETIAKGMEYATLNGGKRLRPFLLFATLELLNENIKKGVKSAIALEMIHSYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP++DN   RRGK T H  + E   I+ G+ LLTYAF ++S    +L  + +   ++S 
Sbjct: 85  DLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNIISK 144

Query: 151 THNI-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T    G+ GM+GGQM+DI+ E   I    +  I   KTG L+    E   I+A   ++++
Sbjct: 145 TSEYAGINGMIGGQMIDIESENKKIGLETLKYIHSHKTGKLIKLPIEIACIIADLEKDKR 204

Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
           + L  + + +G+ FQ+ DD+LD E
Sbjct: 205 KVLEEYADLIGLAFQVKDDILDVE 228


>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
          Length = 373

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 110/196 (56%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A+RY+LL GGK++R  L      L       A+    ++E IH  SLIHDDLP MD
Sbjct: 108 KIHEAMRYSLLAGGKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMD 167

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E  A++AG+ LL ++FE I+     +      + +  L  +IG 
Sbjct: 168 NDDLRRGKPTNHKVFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGA 227

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + +     +  I   KT AL+  A   GAI+   S  E E+LR F
Sbjct: 228 EGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNF 287

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 288 ARYIGLLFQVVDDILD 303


>gi|226198039|ref|ZP_03793611.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
 gi|225929915|gb|EEH25930.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
          Length = 344

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 113/198 (57%), Gaps = 9/198 (4%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +A+RYA+ GG K++R  L      L + +     +V A IE IH +SLI DDLP+MDN
Sbjct: 80  LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 139

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R G+ T+H QYD  TA++A +GL++ AF  +S  +  L  ++R  LM  L  +IG  
Sbjct: 140 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALS--EAPLPLDVRVALMRELASSIGPS 197

Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----KERLR 211
           G+ GGQ +D+      +D T++  + +MKTGAL+  A   G +       E       + 
Sbjct: 198 GLTGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVS 257

Query: 212 CFGENLGIIFQLADDLLD 229
            +GE LG+ +Q+ DD+LD
Sbjct: 258 EYGERLGLAYQVVDDILD 275


>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
          Length = 369

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP MD
Sbjct: 104 KIHEAMRYSLLAGGKRVRPLLCIAACELVGGDVSVAMPAACAVEMIHTMSLIHDDLPCMD 163

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E  A++AG+ LL++AFE ++        +   + +  L   +G 
Sbjct: 164 NDDLRRGKPTNHKAFGEDIAVLAGDALLSFAFEHVAVSTVGASPDKIVRAVGELAKAVGK 223

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E +++     +  I   KT  L+  A   GAI+   +  E ERLR F
Sbjct: 224 EGLVAGQVVDITSEGLNDVGLDHLEYIHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKF 283

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 284 AICIGLLFQVVDDILD 299


>gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
           29799]
 gi|150273035|gb|EDN00192.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
           29799]
          Length = 312

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/233 (38%), Positives = 129/233 (55%), Gaps = 4/233 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
           G+   + +   R D  L +  LQ     +    D L  A+ Y+LL GGK+IR  L  E  
Sbjct: 16  GVSGMMYDEVLRADCALVEDYLQHCFAGRDSRAD-LYDAMLYSLLAGGKRIRPVLALETC 74

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +  TAL    A+E +H YSLIHDDLP MD+  +RRG+PT H  Y E TA++AG+ 
Sbjct: 75  RMCGGDVTTALPFACAVEMVHTYSLIHDDLPCMDDDDLRRGQPTNHKVYGEATAVLAGDA 134

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
           LLT AFE I+   T L           L    G +GM+GGQ LD+  E   +  +++  +
Sbjct: 135 LLTAAFETIAEHGTSLSPERALAASACLGRAAGARGMVGGQALDMAGEGHSLSLSELEEL 194

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           Q++KTGAL+  A E G I+A   + E+  +R + + LG+ FQ+ DD+LD E D
Sbjct: 195 QRLKTGALISAATEIGCIVAGGGEKERAAVRRYAQLLGLAFQIRDDMLDVEGD 247


>gi|76818772|ref|YP_335377.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
 gi|126458601|ref|YP_001075667.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
 gi|167725531|ref|ZP_02408767.1| polyprenyl synthetase [Burkholderia pseudomallei DM98]
 gi|167828246|ref|ZP_02459717.1| polyprenyl synthetase [Burkholderia pseudomallei 9]
 gi|167849704|ref|ZP_02475212.1| polyprenyl synthetase [Burkholderia pseudomallei B7210]
 gi|242313506|ref|ZP_04812523.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
 gi|254264895|ref|ZP_04955760.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
 gi|76583245|gb|ABA52719.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
 gi|126232369|gb|ABN95782.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
 gi|242136745|gb|EES23148.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
 gi|254215897|gb|EET05282.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
          Length = 322

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 9/199 (4%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +A+RYA+ GG K++R  L      L + +     +V A IE IH +SLI DDLP+MDN
Sbjct: 58  LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 117

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R G+ T+H QYD  TA++A +GL++ AF  +S     L  ++R  LM  L  +IG  
Sbjct: 118 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPL--DVRVALMRELASSIGPS 175

Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----KERLR 211
           G+ GGQ +D+      +D T++  + +MKTGAL+  A   G +       E       + 
Sbjct: 176 GLTGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGAELGAAWRAVS 235

Query: 212 CFGENLGIIFQLADDLLDC 230
            +GE LG+ +Q+ DD+LD 
Sbjct: 236 EYGERLGLAYQVVDDILDS 254


>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
          Length = 312

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 14/227 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+ + ++++  LD         +  +  + L  A+RY+LL GGK++R  L      L   
Sbjct: 25  LESSRQQVEQALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGG 77

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+    A+E IH  SLIHDDLP+MDN  +RRG PT H  Y E  AI+AG+ LLT A
Sbjct: 78  DAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRA 137

Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           FE+++  SP    +  I+    LSL    G  G++GGQ++D++ E   +D   +  I   
Sbjct: 138 FEMVALRSPGVPAEQLIKVVGELSLAS--GAPGLVGGQVVDLECEGKDVDLETLEYIHLH 195

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTGAL+     +GA++A AS+     L  +   +G+ FQ+ DD+LD 
Sbjct: 196 KTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDV 242


>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
 gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
          Length = 300

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 3/202 (1%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +  ++ + L  ++RY+LL GGK+IR  L     SL       A+    AIE IH  SLIH
Sbjct: 30  LGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAIEMIHTMSLIH 89

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MDN  +RRG+PT H  Y +  AI+AG+ LLT AFE++S     +       ++  
Sbjct: 90  DDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVDPTRLLNVVGE 149

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+   G  G++GGQ++D++ E   +D   +  I   KTGAL+     +GA++A A++   
Sbjct: 150 LSLVAGAPGLVGGQVVDLECEGKEVDLKTLEYIHLHKTGALLKACVRTGAMIAGANEKLL 209

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
             L  + E +G+ FQ+ DD+LD
Sbjct: 210 HALTTYAEGIGLAFQIIDDILD 231


>gi|261252274|ref|ZP_05944847.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           orientalis CIP 102891]
 gi|260935665|gb|EEX91654.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           orientalis CIP 102891]
          Length = 294

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q N+ +++     L LQ   H     N  L+ A+RY LL GGK+ R FLV 
Sbjct: 1   MQEALTSFQQRNNDQLN-----LWLQALPH----QNQPLIEAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +   +        +A+ECIH YSLIHDDLP+MD+  +RRG+ T HI++DE TAI+ 
Sbjct: 52  ITGQMLGCDKSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQTTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISS----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173
           G+ L T AF I++     P  ++    R +++  L    G  GM  GQ LD+  ++  + 
Sbjct: 112 GDALQTLAFTILADGDLHPNAEVN---RIKMIKVLADASGANGMCLGQALDLAAENRSVS 168

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEE 232
             ++  I + KTGALM  A   GA+ A     E   +L  + + +G+ FQ+ DD+LD   
Sbjct: 169 LEELEEIHRNKTGALMKSAIRLGALAAGEKGLEVMPQLDKYADAVGLAFQVQDDILDIVS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 403

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+RY +  GGK++R  L      L      +A+    ++E IH  SLI DDLP MDN
Sbjct: 139 IYKAMRYTIFAGGKRVRPILCLAACELVGGGERSAIPAACSVEMIHTMSLIKDDLPCMDN 198

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT H  + E  AI++G  LL  AFE ++      K  +R  ++  L  +IG +
Sbjct: 199 DDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVR--VVKELAKSIGTK 256

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQ +D+  E +D     +     I   KTGAL+  +   GA++   S+ E E++R 
Sbjct: 257 GLVAGQAMDLSSEGLDPNDFRLEDLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRS 316

Query: 213 FGENLGIIFQLADDLLD 229
           F   +G++FQ+ DD+LD
Sbjct: 317 FARCIGLLFQVVDDILD 333


>gi|187921415|ref|YP_001890447.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
 gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
          Length = 293

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 11/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++T L+  L   A+   T H      A+RYA+LGG K++R  L      L        
Sbjct: 12  ERVETALEYYLPTEATEPATLHE-----AMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  +S
Sbjct: 67  DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VS 124

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
                L    ++ L+  L    G  GM GGQ +D+      +  TQ+  + +MKTGAL+ 
Sbjct: 125 LTSDVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLR 184

Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
            A   GA+       +  R L  +   +G+ FQ+ DD+LD   D
Sbjct: 185 AAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTD 228


>gi|134093559|ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans]
 gi|133737462|emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Herminiimonas arsenicoxydans]
          Length = 294

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 8/201 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+ YA+L GGK++R  LV    +LF+ +     R  AA+E IH YSL+HDD+P MD
Sbjct: 32  RLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVEMIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIG 155
           +  +RRGKPTVH++YDE  A++ G+ L + AF++++       D +R   M+  L    G
Sbjct: 92  DDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGGI---DPVRQLAMVRLLAKASG 148

Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRC 212
             GM GGQ +D+    ++ +  ++  + ++KTGAL+  +   GA+   + S  E + L  
Sbjct: 149 SLGMCGGQAIDLASVGLNLSLEELEQMHRLKTGALLRVSVLLGALAGKSLSAEETQALDS 208

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +   +G+ FQ+ DD+LD   D
Sbjct: 209 YAAAIGLAFQVVDDVLDATAD 229


>gi|218768956|ref|YP_002343468.1| geranyltranstransferase [Neisseria meningitidis Z2491]
 gi|121052964|emb|CAM09318.1| geranyltranstransferase [Neisseria meningitidis Z2491]
 gi|319411254|emb|CBY91661.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
           synthase) [Neisseria meningitidis WUE 2594]
          Length = 298

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H++Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +T +  +  +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMAQTDLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
 gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
 gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
 gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
          Length = 296

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 124/199 (62%), Gaps = 4/199 (2%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L  ++ Y+L  GGK++R  +V    + +  +    + VG A+E IH YSLIHDDLP M
Sbjct: 31  ESLKKSMLYSLEAGGKRLRPLVVLAVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCM 90

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNI 154
           D+  +RRGKPT H  + E  A++AG+GLLT +F++I+S  + ++    R +L+  L    
Sbjct: 91  DDDDLRRGKPTNHKVFGEAAAVLAGDGLLTESFKLITSHVSEEVSAEKRLRLVDELISAA 150

Query: 155 GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +GM+GGQ  D++ E    T  ++  I + KT  L+ F+  +GAI+A A ++E E+LR 
Sbjct: 151 GTEGMVGGQAADMEAEQKQVTLKELESIHERKTAKLLGFSVTAGAILADAPEDEIEKLRL 210

Query: 213 FGENLGIIFQLADDLLDCE 231
           F  ++GI FQ+ DD+LD E
Sbjct: 211 FSSHIGIGFQIRDDILDIE 229


>gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125]
 gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125]
          Length = 294

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 135/223 (60%), Gaps = 7/223 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHN-DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           +D I D +  +  +H++  ++ D L +++ Y+L  GGK+IR  L+      F  +    +
Sbjct: 9   LDEIKDIIEERMPAHIERLNSPDMLKNSMLYSLKAGGKRIRPALLLATMKSFQKDISQGI 68

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +  AIE IH YSLIHDDLPSMD+  IRRGKPT H  + E  AI+AG+ LLTY+FEI++ 
Sbjct: 69  DLACAIEMIHTYSLIHDDLPSMDDDDIRRGKPTNHKVFGEAHAILAGDALLTYSFEIVA- 127

Query: 134 PKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190
            K +  D  ++  L+  L    G +GM+GGQ+ DI+ E    T   +  I   KTGAL+ 
Sbjct: 128 -KMKGVDPAKTLCLIEELARAAGPEGMVGGQVADIEGENQKLTVEGLEYIHHHKTGALLS 186

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           FA  +GA +A AS+ + E +R F   LG++FQ+ DD+LD E D
Sbjct: 187 FAIVAGARLADASEQDIENIRRFSRELGLLFQIKDDILDVEGD 229


>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
 gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
          Length = 297

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 8/200 (4%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+L GGK++R  L      L   +    +   AA+E IH YSL+HDDLP MD
Sbjct: 33  RLHEAMRYAVLNGGKRVRPLLSFAAGELSGADKTQVIAASAAVELIHAYSLVHDDLPCMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNI 154
           N  +RRGKPT HI+Y E TA++ G+ L + AF++++  ++ L ++ R+QL +   L    
Sbjct: 93  NDILRRGKPTCHIRYGEPTALLVGDSLQSLAFQLLA--ESALTEDPRTQLEMIRHLAFAA 150

Query: 155 GLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGA-IMAHASQNEKERLR 211
           G +GM GGQ +D+    + +   ++  +   KTGAL+  A   GA   +  ++++ ++L 
Sbjct: 151 GSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLD 210

Query: 212 CFGENLGIIFQLADDLLDCE 231
            F + +G+ FQ+ DD+LD E
Sbjct: 211 HFAKCIGLAFQVVDDILDAE 230


>gi|315635861|ref|ZP_07891123.1| geranyltranstransferase [Arcobacter butzleri JV22]
 gi|315479840|gb|EFU70511.1| geranyltranstransferase [Arcobacter butzleri JV22]
          Length = 286

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 115/193 (59%), Gaps = 13/193 (6%)

Query: 49  GGKKIRSFL----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+ R  L    V    SL   N   A+ V   +E +H YSLIHDDLP+MDN  +RRG 
Sbjct: 37  GGKRFRPMLLLSVVKSNKSLLVSN---AMSVALGVEFLHTYSLIHDDLPAMDNSDLRRGF 93

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T+H +YDEVTAI+ G+ L T AF +I++    L ++I+ +L+  L HN G+ GM+ GQ 
Sbjct: 94  QTLHKKYDEVTAILVGDALNTEAFNLIAN--ASLHNDIKVELIKCLAHNGGINGMIIGQA 151

Query: 165 LD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +D   + + I   Q+  +   KT  L+  + + GAI++      +E+L  FG +LG++FQ
Sbjct: 152 IDCHFEKQKIQLNQLEFLHIHKTARLIAASLKMGAIISEYDLQTQEKLYNFGIDLGLLFQ 211

Query: 223 LADDLLD--CEED 233
           + DD++D  C E+
Sbjct: 212 IQDDIIDETCTEE 224


>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
          Length = 373

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 8/194 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  L      L       A++   A+E IH  SLI DDLP MDN  +
Sbjct: 111 AMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDL 170

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  + E  AI++G  LL  AFE ++      K  +R+  +  L  +IG +G++
Sbjct: 171 RRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRA--VKELAKSIGTKGLV 228

Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GQ  D+  E +++  V +     I   KTG+L+  +   GA++   ++ E E++R F  
Sbjct: 229 AGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFAR 288

Query: 216 NLGIIFQLADDLLD 229
            +G++FQ+ DD+LD
Sbjct: 289 CIGLLFQVVDDILD 302


>gi|15224199|ref|NP_179454.1| GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|75266042|sp|Q9SLG2|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
           synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 4; AltName:
           Full=Dimethylallyltranstransferase 4; AltName:
           Full=Farnesyl diphosphate synthase 4; AltName:
           Full=Farnesyltranstransferase 4; AltName:
           Full=Geranyltranstransferase 4; Flags: Precursor
 gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
           synthetase/farnesyltranstransferase [Arabidopsis
           thaliana]
 gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
          Length = 372

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 8/194 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  L      L       A++   A+E IH  SLI DDLP MDN  +
Sbjct: 111 AMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDL 170

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  + E  AI++G  LL  AFE ++      K  +R+  +  L  +IG +G++
Sbjct: 171 RRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRA--VKELAKSIGTKGLV 228

Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GQ  D+  E +++  V +     I   KTG+L+  +   GA++   ++ E E++R F  
Sbjct: 229 AGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFAR 288

Query: 216 NLGIIFQLADDLLD 229
            +G++FQ+ DD+LD
Sbjct: 289 CIGLLFQVVDDILD 302


>gi|257459231|ref|ZP_05624350.1| geranyltranstransferase [Campylobacter gracilis RM3268]
 gi|257443616|gb|EEV18740.1| geranyltranstransferase [Campylobacter gracilis RM3268]
          Length = 357

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 6/196 (3%)

Query: 42  AIRYAL-LGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           A+ Y L  GGK  R+ L+    S  +      AL +  A+E IH YSLIHDDLP+MD+  
Sbjct: 102 ALNYMLQAGGKHFRAQLLLGVVSTVDERRFEGALAIAMALEMIHTYSLIHDDLPAMDDAD 161

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+P++H +YDEVTAI+ G+ L T AF I +S    L D I+ + + +L  N G  GM
Sbjct: 162 LRRGRPSLHKKYDEVTAILVGDALNTDAFLIAAS--ANLSDEIKIKCIKTLARNAGSGGM 219

Query: 160 LGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQ +D   ++  + ++++  +   KTGAL+  A E GAI+          L   G  L
Sbjct: 220 VLGQAIDCRFENSPLKQSELEFLHLHKTGALIAAAFELGAIIGGLKDELAHELYKIGLKL 279

Query: 218 GIIFQLADDLLDCEED 233
           G+IFQ+ DD++D   D
Sbjct: 280 GLIFQIEDDIIDATGD 295


>gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
 gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847735|gb|EDK24653.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
 gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 296

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 126/226 (55%), Gaps = 10/226 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           ++ +++I+ IL   L       QT H   +  A+ Y+L+ GGK++R  L+ E   LF   
Sbjct: 8   RKRTEKIEEILRKYLPD-----QTGHQQIIEEAMEYSLMAGGKRLRPMLMKETFDLFGGK 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                   AAIE IH YSL+HDDLP+MDN   RRG+ T H+ Y E   I+ G+ LL YAF
Sbjct: 63  GGVIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEDMGILTGDALLNYAF 122

Query: 129 EII-SSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           E   S+ +T  +++I   + +  L    G+ GM+GGQ++D++     I    +  I ++K
Sbjct: 123 ETACSAFETDPQNSILIGRALKILAGKAGIYGMIGGQVVDVRSAGCKISGELLAFIYRLK 182

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           TGAL+  +   GA++A A + E  ++      +G+ FQ+ DD+LD 
Sbjct: 183 TGALIEASVMIGAVLAGAKEEEIGKMEEIAGKIGLAFQIQDDILDV 228


>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
 gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
          Length = 297

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 133/224 (59%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 11  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 69  VGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+ GQ+ D++ E     I+E +   I   KTG 
Sbjct: 129 AYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELE--YIHNHKTGK 186

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 187 LLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 230


>gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
 gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
          Length = 294

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 112/201 (55%), Gaps = 6/201 (2%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           H   +  A+ Y++  GGK++R  L+ E   LF           AAIE IH  SLIHDDLP
Sbjct: 27  HQKTIFEAMNYSVKAGGKRLRPLLMREVYRLFGGTGKEIEPFMAAIEMIHTSSLIHDDLP 86

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLT 151
            MDN   RRGK T  + Y    A++AG+ LL YA E  ++   Q+ DN +   + +  L 
Sbjct: 87  CMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYAIE-TAARAFQMTDNSQRVGKCIGILA 145

Query: 152 HNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G+ GM+GGQ +D++  D+ I + ++  I ++KTGAL+  A   GA+MA AS  E E 
Sbjct: 146 QKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECET 205

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           +      +G+ FQ+ DD+LD 
Sbjct: 206 VERMAAAIGLAFQIQDDILDV 226


>gi|330719242|ref|ZP_08313842.1| geranyltranstransferase [Leuconostoc fallax KCTC 3537]
          Length = 292

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 123/213 (57%), Gaps = 14/213 (6%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLI 88
           Q   ++ L + ++YA+L GGK++R  L       F    +TA  L+  +A+E IH YSL+
Sbjct: 25  QATLDEDLNAMMKYAVLNGGKRLRPLLTLAVVQSFG-RTITADILKAASAVEWIHSYSLV 83

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRGKP+VH  + E   I+ G+ LLT AF I+S  ++      R  L+ 
Sbjct: 84  HDDLPAMDNDTMRRGKPSVHALFGEANGILVGDALLTGAFAILSDSRSNEDVQTRLDLIQ 143

Query: 149 SLTHNIGLQGMLGGQMLDIQ------DEFID---ETQVFMIQKMKTGALMCFACESGAIM 199
           +L+   G  GM+ GQ+ D++      D   D   +  +  + + KT AL+ +A E+GA++
Sbjct: 144 ALSALAGGYGMVYGQVNDMRNHNNTDDNNADIGVDWLLSAVHRPKTAALLTYASEAGAML 203

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A   ++ +  LR FG++ G+ +Q+ DD+ D  +
Sbjct: 204 AQ-QRSVQTHLRQFGDSFGVAYQIQDDIDDTAQ 235


>gi|157736691|ref|YP_001489374.1| geranyltranstransferase [Arcobacter butzleri RM4018]
 gi|157698545|gb|ABV66705.1| geranyltranstransferase [Arcobacter butzleri RM4018]
          Length = 286

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 115/193 (59%), Gaps = 13/193 (6%)

Query: 49  GGKKIRSFL----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+ R  L    V    SL   N   A+ V   +E +H YSLIHDDLP+MDN  +RRG 
Sbjct: 37  GGKRFRPMLLLSVVKSNKSLLVPN---AMSVALGVEFLHTYSLIHDDLPAMDNSDLRRGF 93

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T+H +YDEVTAI+ G+ L T AF +I++    L ++I+ +L+  L HN G+ GM+ GQ 
Sbjct: 94  QTLHKKYDEVTAILVGDALNTEAFNLIAN--ASLHNDIKVELIKCLAHNGGINGMIIGQA 151

Query: 165 LD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +D   + + I   Q+  +   KT  L+  + + GAI++      +E+L  FG +LG++FQ
Sbjct: 152 IDCHFEKQKIQLNQLEFLHIHKTARLIAASLKMGAIISEYDLQTQEKLYNFGIDLGLLFQ 211

Query: 223 LADDLLD--CEED 233
           + DD++D  C E+
Sbjct: 212 IQDDIIDETCTEE 224


>gi|109897645|ref|YP_660900.1| polyprenyl synthetase [Pseudoalteromonas atlantica T6c]
 gi|109699926|gb|ABG39846.1| farnesyl-diphosphate synthase [Pseudoalteromonas atlantica T6c]
          Length = 296

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 125/217 (57%), Gaps = 5/217 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D LLQ        H   L +A++YALL GGK++R FLV        +          A+E
Sbjct: 15  DALLQAQIGKLGDHAPTLKNAMQYALLMGGKRMRPFLVYAVGEALGIEQSDLDAPALALE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLK 139
           CIH YSL+HDDLP+MD+  +RRG PT HIQ+DE  AI+AG+ L T AFEII + P +   
Sbjct: 75  CIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLAFEIIVNYPLSDFA 134

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
           +  R +L+  L    G  GM GGQ +D+   ++ I +TQ+ ++   KTGAL+  A +  +
Sbjct: 135 NAQRIELVRILGQASGYDGMCGGQGIDLASTNKLITQTQLELLHSKKTGALITAAVKMAS 194

Query: 198 IMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
           ++  +  +E K  L+ +   +G+ FQ+ DD+LD   D
Sbjct: 195 VLCPSVSDESKSLLQQYASTIGLAFQVQDDILDVVGD 231


>gi|261391792|emb|CAX49247.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
           synthase) [Neisseria meningitidis 8013]
 gi|325139150|gb|EGC61696.1| geranyltranstransferase [Neisseria meningitidis ES14902]
          Length = 298

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 118/196 (60%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HIQYDE TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHIQYDEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +  +  +  +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
 gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
 gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
 gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
          Length = 297

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 133/224 (59%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 11  KESKTFVEEKLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 69  VGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+ GQ+ D++ E     I+E +   I   KTG 
Sbjct: 129 AYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELE--YIHNHKTGK 186

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 187 LLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 230


>gi|269138336|ref|YP_003295036.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202]
 gi|267983996|gb|ACY83825.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202]
 gi|304558368|gb|ADM41032.1| Geranyltranstransferase [Edwardsiella tarda FL6-60]
          Length = 301

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 118/203 (58%), Gaps = 5/203 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+RY ALLGGK++R +LV     LF  +        AA+ECIH YSL+HDDLP+MD+
Sbjct: 33  LVGAMRYGALLGGKRLRPYLVYATGGLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  AI+AG+ L T AF I++  P   + D  R Q++  L H  G+
Sbjct: 93  DDLRRGQPTCHIKFGEAHAILAGDALQTLAFSILADGPMPGVADRDRLQMLSELAHASGV 152

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCF 213
            GM GGQ LD++ E   +    +  I + KTGAL+  A   GA+    A +     L  +
Sbjct: 153 AGMCGGQALDLEAEGRHVALAALEQIHRHKTGALIRCAVRMGALAGGDAGRRALPALDRY 212

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
              +G+ FQ+ DD+LD   D  K
Sbjct: 213 AAAIGLAFQVQDDILDVVGDSSK 235


>gi|238918995|ref|YP_002932509.1| polyprenyl synthetase, [Edwardsiella ictaluri 93-146]
 gi|238868563|gb|ACR68274.1| polyprenyl synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 301

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 120/203 (59%), Gaps = 5/203 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+RY ALLGGK++R +LV    SLF  +        AA+ECIH YSL+HDDLP+MD+
Sbjct: 33  LVGAMRYGALLGGKRLRPYLVYATGSLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  AI+AG+ L T AF I++  +   + D  R Q++  L H  G+
Sbjct: 93  DDLRRGQPTCHIKFGEAHAILAGDALQTLAFSILADGQMPGVTDRDRLQMLSELAHASGV 152

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ LD++ E   +    +  I + KTGAL+  A   GA+   A  +N    L  +
Sbjct: 153 AGMCGGQALDLEAEGRHVALAALEQIHRHKTGALIRCAVRMGALAGGAPGRNALPVLDRY 212

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
              +G+ FQ+ DD+LD   D  K
Sbjct: 213 AAAIGLAFQVQDDILDVVGDSSK 235


>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
 gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
          Length = 291

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 15/211 (7%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ++ L  A+ Y+L+ GGK++R  L+   A     +    L    A+E IH YSLIHDDLP+
Sbjct: 27  DNTLREAMEYSLMAGGKRLRPILLMAAADAVGSDGTKLLPAACALEMIHTYSLIHDDLPA 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGK T H  Y +  AI+AG+ LLT AF ++   K     ++ +  +L +   I
Sbjct: 87  MDNDDYRRGKLTNHKVYGDGIAILAGDALLTLAFTVLLRQK-----DVPAVSLLRVVDEI 141

Query: 155 ----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G +GM+GGQ+LD+Q E   I   ++  +   KTGAL   A  SGAI+  AS+ +  
Sbjct: 142 SRAAGAEGMVGGQVLDLQAENKTISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLT 201

Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            L  + ++ G+ FQ+ DD+LD     ED+ K
Sbjct: 202 ALTAYADHFGLAFQITDDILDVVGNAEDIGK 232


>gi|261378523|ref|ZP_05983096.1| geranyltranstransferase [Neisseria cinerea ATCC 14685]
 gi|269145073|gb|EEZ71491.1| geranyltranstransferase [Neisseria cinerea ATCC 14685]
          Length = 298

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 118/196 (60%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H++Y E TA++ G+ L T AF++++ P + L  + +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHVKYGEATALLVGDALQTQAFDVLARPSS-LPASRQLAMLSVLAKAGGSSGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +T +  +  +KTGAL+  A   GA+   + S+N    L  +   L
Sbjct: 158 GGQAIDLANVGKQMAQTDLEQMHSLKTGALIRAAVLLGAMSCPNLSENSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|157146963|ref|YP_001454282.1| geranyltranstransferase [Citrobacter koseri ATCC BAA-895]
 gi|157084168|gb|ABV13846.1| hypothetical protein CKO_02740 [Citrobacter koseri ATCC BAA-895]
          Length = 299

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGRMFGVSLSTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVADRDRIAMISELAN 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLAAEGKQVPLEALERIHRHKTGALIRAAVRLGALSAGENGRNALPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231


>gi|126445573|ref|YP_001062715.1| polyprenyl synthetase [Burkholderia pseudomallei 668]
 gi|126225064|gb|ABN88569.1| geranyltranstransferase [Burkholderia pseudomallei 668]
          Length = 322

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 9/199 (4%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +A+RYA+ GG K++R  L      L + +     +V A IE IH +SLI DDLP+MDN
Sbjct: 58  LHAAMRYAVFGGGKRLRPLLCHAAGELVDASREALAQVSAVIEMIHVFSLIQDDLPAMDN 117

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R G+ T+H QYD  TA++A +GL++ AF  +S     L  ++R  LM  L  +IG  
Sbjct: 118 DDLRHGRLTLHKQYDVATALLASDGLISQAFLALSEAPLPL--DVRVALMRELASSIGPS 175

Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----KERLR 211
           G+ GGQ +D+      +D T++  + +MKTGAL+  A   G +       E       + 
Sbjct: 176 GLTGGQYIDLTSIGAHLDRTELEQMHRMKTGALIRAAVRMGVLCGTVPGVELGAAWRAVS 235

Query: 212 CFGENLGIIFQLADDLLDC 230
            +GE LG+ +Q+ DD+LD 
Sbjct: 236 EYGERLGLAYQVVDDILDS 254


>gi|261366961|ref|ZP_05979844.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176]
 gi|282571079|gb|EFB76614.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176]
          Length = 295

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 124/223 (55%), Gaps = 14/223 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
           Q + +R++ + D+ L Q A   Q         A RY+LLGG K+IR+ L      L    
Sbjct: 15  QMSEERLEKLCDEYLPQKAEIGQ---------AARYSLLGGGKRIRAVLALSACELAGKP 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL    A+E +HCYSLIHDD+P MDN   RRG+P+ H QY E TA++A + L+T AF
Sbjct: 66  AELALDYACALEMLHCYSLIHDDMPCMDNDDFRRGRPSCHKQYGEATALLAADALVTAAF 125

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
           E+I+  + +L    R +    L    G +GML GQ LD + E     E Q+  +   KTG
Sbjct: 126 EVIA--QAELSPESRCRAAAVLAKAGGARGMLYGQELDKKYEAQSATEQQLLELHAHKTG 183

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AL+  A E G I A A+   ++ L+ +   LG++FQ+ DD+LD
Sbjct: 184 ALILAAVELGCIAADAAPATRQALQRYAAELGLVFQIVDDILD 226


>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
 gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
          Length = 314

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           QH  ++  A+RY+LLG GK++   L      L   +   A+ +  A+E +H  SLIHDDL
Sbjct: 46  QHPIKIHEAMRYSLLGNGKRMCPILCIASCELVGGDEELAMPLACALEMVHAMSLIHDDL 105

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E  AI+AG+ LL+ AFE I+S    +  +   + +  L  
Sbjct: 106 PCMDNDDLRRGKPTNHKVFGECIAILAGDALLSLAFEHIASKTKNVSPDCVVRAIAELGS 165

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            IG +G++ GQ++DI  E   +    +  I   KT  L+  +   GAIM  A     ERL
Sbjct: 166 AIGSRGVVAGQIVDIDSEGKEVSMKTLEYIHVHKTAKLLEASAVCGAIMGGADDASIERL 225

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +  ++G+++Q+ DD+LD
Sbjct: 226 RKYARSIGLLYQVVDDILD 244


>gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1]
 gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
          Length = 295

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 128/224 (57%), Gaps = 10/224 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+DT L+ L +       T+  +RL +A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDTALEPLFIAP-----TKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQAN 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  +  
Sbjct: 67  GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLD 126

Query: 134 PK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
           P  +   DNIR  ++ +L    G  GM+GGQ +D+      +D+  +  + + KTGAL+ 
Sbjct: 127 PHLSPQADNIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHRHKTGALIE 186

Query: 191 FACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+  A A Q + + L+ + + +G+ FQ+ DD+LD E D
Sbjct: 187 ASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESD 230


>gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
 gi|167711696|gb|EDS22275.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
 gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
           SSC/2]
          Length = 297

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 128/232 (55%), Gaps = 11/232 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           ++++   +I+ ILD+ L       +T     +L+A+   +  GGK++R  L+ E   +F 
Sbjct: 6   EMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLINETYQMFG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                     AAIE IH YSLIHDDLP++DN   RRG+ T HI Y E  AI+AG+ LL Y
Sbjct: 61  GKEDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNY 120

Query: 127 AFEIISSP-KTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           A+E+ +       KD I +  + +  L    G+ GM+GGQ+ D++ E   +   Q+  I 
Sbjct: 121 AYEVATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSMEQILFIH 180

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K KT AL+      GA++A AS+ +  ++   GE +G+ FQ+ DD+LD   D
Sbjct: 181 KNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGD 232


>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 296

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 124/202 (61%), Gaps = 10/202 (4%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  ++ Y+L  GGK++R  +V    + +  +    + VG A+E IH YSLIHDDLP M
Sbjct: 31  DSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCM 90

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154
           D+  +RRGKPT H  + E TA++AG+GLLT +F++I+S    + D + ++  L L + + 
Sbjct: 91  DDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITS---HVSDEVSAEKRLRLVNELI 147

Query: 155 ---GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM+GGQ+ D++ E    T  ++  I + KT  L+ F   +GAI+A A + + E 
Sbjct: 148 SAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLSFCVIAGAILADAPEEDIET 207

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
           LR F  ++GI FQ+ DD+LD E
Sbjct: 208 LRTFSSHIGIGFQIRDDILDLE 229


>gi|104779861|ref|YP_606359.1| geranyltranstransferase [Pseudomonas entomophila L48]
 gi|95108848|emb|CAK13544.1| geranyltranstransferase [Pseudomonas entomophila L48]
          Length = 295

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 10/229 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           Q    R+D  L+ L    +  +     +RL +A+RY+++ GGK++R  L           
Sbjct: 7   QSAQARVDAALEPLFQAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEALGAP 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 62  AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
             +  P+ +   D IR Q++ +L    G  GM+GGQ +D+    +  D+  +  + + KT
Sbjct: 122 SALLDPRLSPQADGIRLQMVQALAKAAGPAGMVGGQAIDLGSVGVKLDQQALEYMHRHKT 181

Query: 186 GALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+  A A Q + + L+ + + +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASARAEQAQLDALQVYAQAIGLAFQVQDDILDVESD 230


>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
 gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
          Length = 312

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 125/225 (55%), Gaps = 10/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+ +  R++  LD       + M  +  + L  A+RY+LL GGK++R  L      L   
Sbjct: 27  LKLSRDRVEIALD-------ASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGG 79

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ +L+ A
Sbjct: 80  SSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRA 139

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FE+++     +  +   +++  L    G  G++GGQ++D++ E   +D   +  I   KT
Sbjct: 140 FEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKT 199

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AL+     +GA++  A+ ++ + +R +   +G+ FQ+ DD+LD 
Sbjct: 200 AALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDV 244


>gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 300

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 12/200 (6%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+LL GGK++R+ L    A+LF+++  + L   A IE IH YSLIHDDLP+MD+   
Sbjct: 39  AMNYSLLAGGKRLRAVLCISSAALFDLSPTSILPFAAGIEMIHTYSLIHDDLPAMDDDDF 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GL 156
           RRGKP+ H  ++E  AI+AG+ LLT AF  +S+    L   + S  +L   H I    G 
Sbjct: 99  RRGKPSCHKAFNEALAILAGDALLTDAFTFMST----LNSIVPSNNILVAIHEIAQAAGS 154

Query: 157 QGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            GM+ GQ +DI+   + +     + +I + KTGAL   +C +GA++A A+++    L+C+
Sbjct: 155 NGMVKGQSMDIEHTGVSDVSFNTLCIIHEYKTGALFRASCTTGAMLAGANESAIYALKCY 214

Query: 214 GENLGIIFQLADDLLDCEED 233
           GE LG  FQ+ DD+L+   D
Sbjct: 215 GEALGAAFQITDDILNVTAD 234


>gi|284051541|ref|ZP_06381751.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca]
          Length = 239

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 123/223 (55%), Gaps = 15/223 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L +  + ++  LD       + +   + +++  ++RY+L+ GGK++R  L      
Sbjct: 26  LSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCE 78

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y +  AI+AG+GL
Sbjct: 79  LLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGL 138

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           L+YAFE +++    +      Q++  L   +G  G++GGQ++DI  E    + E  +  I
Sbjct: 139 LSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLTFI 198

Query: 181 QKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              KTGAL+  C  C  GAI+A A++ + ERL  + +N+G+ F
Sbjct: 199 HTHKTGALLEACVVC--GAILAGANETDLERLSRYAKNIGLAF 239


>gi|294664721|ref|ZP_06730051.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292605499|gb|EFF48820.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 291

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 7/203 (3%)

Query: 33  TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T    RL +A+R+A+LGG K++R  LV    +LF            A+E IH YSL+HDD
Sbjct: 25  THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     +  +R   M SL 
Sbjct: 85  LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATAPASAE--LRVGWMQSLA 142

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208
           +  G  GM GGQ LDI D       +  +Q+M   KTGAL+  A   GA+   A+  +++
Sbjct: 143 NAAGAAGMCGGQALDI-DATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAAAADQQ 201

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
           RL  F + LG+ FQ+ DD+LD E
Sbjct: 202 RLDEFADALGLAFQVRDDILDVE 224


>gi|238787986|ref|ZP_04631782.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641]
 gi|238723934|gb|EEQ15578.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641]
          Length = 306

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 120/203 (59%), Gaps = 5/203 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L+ A+RY A+LGGK++R +LV     +F ++        AAIECIH YSL+HDDLP+
Sbjct: 36  NSDLVKAMRYGAVLGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLMHDDLPA 95

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT H+++ E  AI+AG+ L T AF I++ SP   + D  R  ++  L + 
Sbjct: 96  MDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAESPMPDVADKDRLSMIAELAYA 155

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210
            G+ GM GGQ LD++ E   I    +  I + KTGAL+  A   GA+ A A   E    L
Sbjct: 156 SGVAGMCGGQALDLEAEARQISLDDLEQIHRHKTGALIRAAVRLGALAAGAPGREALPLL 215

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +   +G+ FQ+ DD+LD   D
Sbjct: 216 DRYANAIGLAFQVQDDILDVIGD 238


>gi|224543278|ref|ZP_03683817.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523811|gb|EEF92916.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM
           15897]
          Length = 284

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 14/204 (6%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+++ GGK++R  L  +    ++V++   L +  AIE IH YSLIHDDLP MDN  +
Sbjct: 29  AMTYSVMAGGKRLRPLLFIQTLRAYSVDYHKYLDIACAIEMIHTYSLIHDDLPGMDNDDL 88

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H Q+DE TAI+AG+ LL  +  +I   +  L D ++ +++  L +  GL GM+
Sbjct: 89  RRGKPTCHKQFDEATAILAGDALLNESMNVI--IRMDLDDALKVEVLRYLYNASGLGGMI 146

Query: 161 GGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            GQ  D+  E     +DE Q   I   KTGAL+    +   ++  A + + ++L   G  
Sbjct: 147 YGQQQDMYFETHTATLDELQA--IHHDKTGALISVPMKIAGLI--AKKEDADKLENIGFK 202

Query: 217 LGIIFQLADDLLDC---EEDLPKK 237
           LG+ FQ+ DD+LD     E L KK
Sbjct: 203 LGLAFQIQDDILDVTSTTETLGKK 226


>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
 gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
          Length = 297

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 133/224 (59%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L+  A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 11  KESKTFVEENLVSYANELQCP--NVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLG 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII- 131
           +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF++I 
Sbjct: 69  VGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIM 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGA 187
           +  + ++    + +L+L L    G +GM+ GQ+ D++ E     I+E +   I   KTG 
Sbjct: 129 AYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELE--YIHNHKTGK 186

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 187 LLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVE 230


>gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
 gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
          Length = 290

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D  L+   +   ++N  L  ++ Y++ +GGK+IR  L+     ++  ++   L    AIE
Sbjct: 11  DQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +++     +   
Sbjct: 71  MIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLEEGT 130

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGA 197
           +      + +    G  GM+GGQ++DI +E  +E  +  +  M   KTG L+  +  SGA
Sbjct: 131 SALKATKI-IADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGA 189

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           ++A AS+ + ++L  FG  LG+ FQ+ DD+LD 
Sbjct: 190 VLAEASEGDIKKLEDFGYKLGLAFQIKDDILDV 222


>gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 314

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/230 (37%), Positives = 125/230 (54%), Gaps = 26/230 (11%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L  A+       DRL  A RY+LL GGK++R  LV   A   +      L    AIE +H
Sbjct: 19  LDRAAQFTADCPDRLSEASRYSLLAGGKRLRPLLVLLSAQACSGKPEPGLPAALAIEMVH 78

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP+MD+  +RRG+PT H Q+DE TAI+AG+GLLT AFE +++        +R
Sbjct: 79  TYSLIHDDLPAMDDDDLRRGRPTCHRQFDEATAILAGDGLLTRAFETLAAGIVDPATAVR 138

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD---------IQDEFIDET--------------QVFMI 180
              +L L+   G++GM+GGQ  D         I+ +  +ET              Q+  I
Sbjct: 139 --CVLELSRASGVEGMVGGQQADLDAEKRFEQIESKSSEETAENPAEPSDEAELQQLKAI 196

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            + KTG L+  A   GAI+  A   + + +  +G+ +G+ FQ+ DD+LDC
Sbjct: 197 HRRKTGKLITCAVRMGAILGGADDAQLDAITRYGDAIGLAFQVMDDILDC 246


>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
 gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 297

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 4/198 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY++LGG K++R  L      L   +   A   GAA+E IH YSL+HDDLP MD
Sbjct: 33  RLHDAMRYSVLGGGKRVRPLLSFAAGELSGADKTHATIAGAAVELIHVYSLVHDDLPCMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H++YDE TA++ G+ L + AF++++        +++ +++  L    G 
Sbjct: 93  NDTLRRGKPTCHVRYDEPTALLVGDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAAGS 152

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
           +GM GGQ +D+    + +   ++  +   KTGAL+  A   GA   +   + + + L  F
Sbjct: 153 RGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGNRLDETQFKLLDHF 212

Query: 214 GENLGIIFQLADDLLDCE 231
            + +G+ FQ+ DD+LD E
Sbjct: 213 AKCMGLAFQVIDDILDTE 230


>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
 gi|251757288|sp|P54383|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
          Length = 296

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 124/202 (61%), Gaps = 10/202 (4%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  ++ Y+L  GGK++R  +V    + +  +    + VG A+E IH YSLIHDDLP M
Sbjct: 31  DSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCM 90

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154
           D+  +RRGKPT H  + E TA++AG+GLLT +F++I+S    + D + ++  L L + + 
Sbjct: 91  DDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITS---HVSDEVSAEKRLRLVNELI 147

Query: 155 ---GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM+GGQ+ D++ E    T  ++  I + KT  L+ F   +GAI+A A + + E 
Sbjct: 148 SAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIET 207

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
           LR F  ++GI FQ+ DD+LD E
Sbjct: 208 LRTFSSHIGIGFQIRDDILDLE 229


>gi|145589885|ref|YP_001156482.1| polyprenyl synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048291|gb|ABP34918.1| farnesyl-diphosphate synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 304

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/233 (39%), Positives = 128/233 (54%), Gaps = 18/233 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV--- 67
           +S+R ++ LD LL    S     H  RL  A+RYA  GG K+IR  LV     L N    
Sbjct: 14  HSQRAESALDRLL---DSEKTIPH--RLHEAMRYAAQGGGKRIRPLLVYAAGQLGNSINE 68

Query: 68  -----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                 +        AIECIH YSL+HDDLP MD+  +RRG+PTVH  +DE TA++ G+ 
Sbjct: 69  QADQEKNAALDAAAVAIECIHAYSLVHDDLPCMDDDDLRRGRPTVHKAFDEATALLVGDA 128

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L T AFEI+++ K     NIR  ++ +L    G +GM GGQ +D++   + +D   +  +
Sbjct: 129 LQTRAFEILANAKCDA--NIRLAMISALAAASGSRGMAGGQAIDLESVGKKLDLDGLKQM 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             MKTGAL+  A   G I A  S  +  +L  + E LG+ FQ+ DD+LD   D
Sbjct: 187 HAMKTGALLSCATALGGIAAGLSPAQMTQLLVYSEALGLAFQVVDDVLDATAD 239


>gi|309379784|emb|CBX21560.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 298

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 117/196 (59%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAVLDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H++Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHVKYGEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +    + +  +  +  +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|84685990|ref|ZP_01013886.1| geranylgeranyl pyrophosphate synthetase [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666083|gb|EAQ12557.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
           HTCC2654]
          Length = 286

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/199 (42%), Positives = 120/199 (60%), Gaps = 8/199 (4%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L   + YA+ GGK +R FLV E ASLF+V+   +    AAIE +H  SL+HDDLP MD+ 
Sbjct: 27  LAEPMAYAVEGGKGLRGFLVIEGASLFDVSPDRSSYAAAAIEAVHASSLVHDDLPCMDDD 86

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG+PTVH+++DE T ++ G  L   AFE++  P     D IR++L  +L H  G  G
Sbjct: 87  DLRRGRPTVHVKWDEATGVLVGVALQFLAFELVGDPAVGSGD-IRAELARTLGHGAGGFG 145

Query: 159 MLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LD+  E         ++  +Q  KTGAL  ++  +GAI+  A   ++E LR +G
Sbjct: 146 MVMGQSLDLAAEVAPNPLTLDEIIALQAGKTGALFEWSAFAGAILGEA---DREPLRQYG 202

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG  FQ+ADD+LD E D
Sbjct: 203 AALGQAFQIADDILDIEGD 221


>gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 297

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 122/197 (61%), Gaps = 14/197 (7%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D LL A+ Y+LL GGK++R  L    A++   +    +   A++ECIH YSLIHDDLP+M
Sbjct: 29  DSLLQAMEYSLLAGGKRLRPVLTLAWATMLGGDAERVMPFAASLECIHTYSLIHDDLPAM 88

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS----LT 151
           D+  +RRG+P+ H +YDE TAI+AG+GLLT +F +++  +  L   + ++ +L     L 
Sbjct: 89  DDDDLRRGRPSNHKRYDEATAILAGDGLLTESFVLMT--EASLIRGLPAERVLRAVSVLA 146

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNE 206
              G  GM+GGQ +D+  EF    +V +     +  MKTGAL+  ACE GA++A AS+ +
Sbjct: 147 VAAGSGGMVGGQAVDM--EFTGRAEVALDELRAMHAMKTGALITAACECGAVLAGASERD 204

Query: 207 KERLRCFGENLGIIFQL 223
            E  R +G  +G+ FQ+
Sbjct: 205 VENAREYGRAVGVAFQI 221


>gi|313890735|ref|ZP_07824360.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120836|gb|EFR43950.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 289

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 6/203 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L++AIRY A  GGK+IR  L+ E    F+V    +   V AA+E IH  SLIHDDLP
Sbjct: 22  SEHLIAAIRYSAEAGGKRIRPLLLLELLEAFSVTLTDSHYDVAAALEMIHTGSLIHDDLP 81

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H ++DE TAI+AG+ L   AF +I+  +T L  NI+  LM  L+H+
Sbjct: 82  AMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDAFALIA--ETNLSANIKVDLMHCLSHS 139

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +  T +  I + KTG L+ +   + A +A   +     L 
Sbjct: 140 SGTFGMVGGQMLDMKAEGQELALTDLQEIHRHKTGCLLAYPFWAAAKIADVDEEILLDLY 199

Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
             G  +G  FQ+ DD+LD   D 
Sbjct: 200 QAGLKVGHAFQVRDDILDVTADF 222


>gi|317498984|ref|ZP_07957266.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893733|gb|EFV15933.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 297

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 131/234 (55%), Gaps = 15/234 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           ++++   +I+ ILD+ L       +T     +L+A+   +  GGK++R  L+ E   +F 
Sbjct: 6   EMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLINETYQMFG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                     AAIE IH YSLIHDDLP++DN   RRG+ T HI Y E  AI+AG+ LL Y
Sbjct: 61  GKGDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLNY 120

Query: 127 AFEIIS-----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           A+E+ +     + K Q+ + + +  +L+     G+ GM+GGQ+ D++ E   +   Q+  
Sbjct: 121 AYEVATKAFDLAEKDQIMNVVEAIKILA--SKPGIYGMIGGQVADVELEGTPLSMEQILF 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I K KT AL+      GA++A AS+ +  ++   GE +G+ FQ+ DD+LD   D
Sbjct: 179 IHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGD 232


>gi|229825480|ref|ZP_04451549.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC
           49176]
 gi|229790043|gb|EEP26157.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC
           49176]
          Length = 307

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 35  HNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDD 91
             D+LL  A+ Y+LL GGK++R  ++ E   LF       +R   AA+E IH YSLIHDD
Sbjct: 29  EEDKLLEEAMNYSLLAGGKRLRPLIMLEIFRLFGGKKEGLVRPFAAALEMIHTYSLIHDD 88

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP----KTQLKDNIRSQLM 147
           LP+MDN  +RRG+PT H  Y E  AI+AG+GLL  A E  S      +T  +     + +
Sbjct: 89  LPAMDNDDLRRGRPTNHKVYGEAVAILAGDGLLNLAAETSSKAFRYCETICEYKRVGEAL 148

Query: 148 LSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ--KMKTGALMCFACESGAIMAHAS 203
             L    G  GM+GGQ+LD+  E    ++T+ F +    +KTG L+  A   GA++A A 
Sbjct: 149 SRLFTYSGADGMIGGQILDMLSEEGKKEKTEDFFLTMYDLKTGGLIKAAFVIGALLAGAG 208

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++E + +   G ++G++FQL DD+LD   D  K
Sbjct: 209 EDEIDIIEKVGASVGLVFQLQDDILDISGDETK 241


>gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
 gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
 gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
 gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2]
 gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1]
 gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
 gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
 gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1]
 gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2]
 gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
          Length = 294

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  RLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTD-AAALSPVQQAALVRELALASGS 149

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ +D+    I  T  Q+  + +MKTGAL+  A   GA+     S +    L  +
Sbjct: 150 LGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAALDVY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 210 AGAVGLAFQVVDDILDVTTD 229


>gi|222823159|ref|YP_002574732.1| geranyltranstransferase [Campylobacter lari RM2100]
 gi|222538380|gb|ACM63481.1| geranyltranstransferase [Campylobacter lari RM2100]
          Length = 282

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 14/201 (6%)

Query: 41  SAIRYAL-LGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            A+++ L  GGK  R+ L+     T+  +LF      AL    A+E IH YSLIHDDLP+
Sbjct: 26  EALKWMLEAGGKHFRAQLLLGIVNTKNPALFE----KALNAALALEFIHTYSLIHDDLPA 81

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRGK T+H +YDE TAI+ G+ L T AF ++S  K  LK+NIR +L+ +L  N 
Sbjct: 82  MDNASLRRGKQTLHKKYDETTAILVGDALNTEAFLLLS--KLDLKENIRLKLIETLAFNA 139

Query: 155 GLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           GL GM+ GQ +D   +D  ++  QV  +   KT  L+  A + G  +    + E E++  
Sbjct: 140 GLGGMIIGQAIDCYFEDIPLNLEQVEFLHIHKTARLIAAALKMGCEICELDEKECEQIYD 199

Query: 213 FGENLGIIFQLADDLLDCEED 233
            G  +G+IFQ+ DD++D   D
Sbjct: 200 IGLLIGLIFQIKDDIIDATLD 220


>gi|294625513|ref|ZP_06704141.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600182|gb|EFF44291.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 291

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 7/203 (3%)

Query: 33  TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T    RL +A+R+A+LGG K++R  LV    +LF            A+E IH YSL+HDD
Sbjct: 25  THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAMAVELIHAYSLVHDD 84

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     +  +R   M SL 
Sbjct: 85  LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATAPASAE--LRVGWMQSLA 142

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208
           +  G  GM GGQ LDI D       +  +Q+M   KTGAL+  A   GA+   A+  +++
Sbjct: 143 NAAGAAGMCGGQALDI-DATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAAAADQQ 201

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
           RL  F + LG+ FQ+ DD+LD E
Sbjct: 202 RLDEFADALGLAFQVRDDILDVE 224


>gi|295397723|ref|ZP_06807795.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
 gi|294974052|gb|EFG49807.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
          Length = 297

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 3/212 (1%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           +LD+ +L++          +L  ++ Y+L  GGK+IR  L+       NV+    L    
Sbjct: 13  VLDEAILKSVDQFGHAQPGQLKESMVYSLNTGGKRIRPMLLLATLKALNVDIQIGLNTAV 72

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MDN   RRGK T H  +DE TAI+AG+ LLT +F +I++    
Sbjct: 73  ALEYIHTYSLIHDDLPAMDNDDYRRGKLTNHKAFDEATAILAGDSLLTDSFALIANDSKI 132

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
                +  L+  L+   G  GM+ GQ+LD+  E   I+   +  I K KTG L+ +A  +
Sbjct: 133 QNMQTKVNLIAELSKAAGSNGMIAGQILDVDSEGKQINLRTLQDIHKHKTGELIRYAVFA 192

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           G  +A AS      L  F    GI +Q+ +DL
Sbjct: 193 GGQIAQASSEVATLLDDFAWAYGIAYQIQNDL 224


>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
 gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
          Length = 302

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 8/202 (3%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  L     +L         R+  A+E IH YSL+HDDLP MD
Sbjct: 38  RLHEAMRYAVLGGGKRVRPLLAHAAGALAGAAAEDLDRIACAVELIHAYSLVHDDLPCMD 97

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNI 154
           +  +RRGKPTVH+++DE TA++AG+ L T AF++++  +  L  +  +QL +   L    
Sbjct: 98  DDVLRRGKPTVHVEFDEATALLAGDALQTLAFQVLA--ERPLGTDPANQLAMLNQLAIAS 155

Query: 155 GLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLR 211
           G +GM GGQ +D+    + +   ++  +   KTGAL+  A   GA        +E  RL 
Sbjct: 156 GSRGMAGGQAIDLASVGKRLGREELEFMHIHKTGALIRAAVLLGARAGGTLGADEHARLD 215

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + + +G++FQ+ DDLLD E D
Sbjct: 216 HYAKVVGLLFQVVDDLLDAEAD 237


>gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
 gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
          Length = 294

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  RLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVRELALASGS 149

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ +D+    I  T  Q+  + +MKTGAL+  A   GA+     S +    L  +
Sbjct: 150 LGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADTMAALDVY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 210 AGAVGLAFQVVDDILDVTTD 229


>gi|160897684|ref|YP_001563266.1| polyprenyl synthetase [Delftia acidovorans SPH-1]
 gi|160363268|gb|ABX34881.1| Polyprenyl synthetase [Delftia acidovorans SPH-1]
          Length = 316

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 17/204 (8%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   A   +     A+R G A+E IH YSL+HDD+P MDN  +
Sbjct: 52  AMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDVL 111

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQ 157
           RRGKPTVH+Q+ E +A++AG+ L   AFE++     Q   + D ++++L   L    G Q
Sbjct: 112 RRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQAGSMPDALQARLCRLLGRAAGAQ 171

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGA------LMCFACESGAIMAHASQNEKER 209
           GM GGQ +D+      + E Q+  + ++KTGA      LM  AC+ G + A A Q     
Sbjct: 172 GMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHASVLMGAACKEG-VDAQAWQA---- 226

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LG+ FQ+ DD+LD   D
Sbjct: 227 LSDYGQALGVAFQVVDDILDVVAD 250


>gi|237809244|ref|YP_002893684.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187]
 gi|237501505|gb|ACQ94098.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187]
          Length = 296

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 10/232 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           LQ  S+     +DDLLLQ    +    + RL +A+R+ L LGGK++R FLV    S+ ++
Sbjct: 3   LQTFSQHYRQRIDDLLLQKIETL-PDLSPRLKAAMRHGLVLGGKRVRPFLVYATGSMLDI 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AAIECIH YSLIHDDLP+MD+  +RRG PTVH  +DE TA++AG+ L T A
Sbjct: 62  DEALLDGPAAAIECIHAYSLIHDDLPAMDDDDLRRGHPTVHKAFDEATAVLAGDALQTLA 121

Query: 128 FEIISSPKTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182
           F I++       D +R+Q   ++ +L    G  GM GGQ LD+  E   +    + +I +
Sbjct: 122 FSILAD--HPFPDALRTQQVKMLSTLAQASGYAGMCGGQALDLAAEGQHVGLEALELIHR 179

Query: 183 MKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
            KTGAL+  A   GA+       E    L+ +   +G+ FQ+ DD+LD   D
Sbjct: 180 HKTGALIECAVMLGALCQQDVAAETVSALKKYAAAIGLAFQVQDDILDVVSD 231


>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
          Length = 364

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 126/245 (51%), Gaps = 19/245 (7%)

Query: 4   GLPSKLQENSKRIDTILDD-------LLLQTASHMQTQHNDRLL--------SAIRYALL 48
           G+ + L     R+ T  DD        +++ A+H+    +D +          A+RY+LL
Sbjct: 50  GVSAVLTGEEARVSTQRDDAPFNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLL 109

Query: 49  -GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L      +       A+    A+E IH  SLIHDDLP MDN  +RRGKPT 
Sbjct: 110 AGGKRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 169

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  + +  A++AG+ LL +AFE +++  T +        +  L   IG +G++ GQ++D+
Sbjct: 170 HKVFGKDVAVLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDL 229

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D  +    +  I   KT AL+  +   GAI+   S ++ E+LR F   +G++ Q+ 
Sbjct: 230 NCTGDANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVV 289

Query: 225 DDLLD 229
           DD+LD
Sbjct: 290 DDILD 294


>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           coahuilensis m4-4]
          Length = 294

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 114/185 (61%), Gaps = 3/185 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L+      F  +    ++   A+E +H YSLIHDDLPSMD+  +RRGKPT H
Sbjct: 44  GGKRIRPVLLLATIEAFGKSPALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + E TAI+AG+ LLTY+FE+I+S K  L    + +L+       G +GM+GGQ+ D++
Sbjct: 104 KVFGEATAILAGDALLTYSFEVIASMKDILPQT-KIELVRLFAKAAGPEGMVGGQVADME 162

Query: 169 DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    T  ++  I + KTG L+ +A  +GAI+  AS+ E    + + E++G+ FQ+ DD
Sbjct: 163 GERKTLTLEELEYIHRNKTGKLLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDD 222

Query: 227 LLDCE 231
           +LD E
Sbjct: 223 ILDIE 227


>gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma
           proteobacterium HTCC2148]
          Length = 303

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 13/228 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           R +  L +L    ASH +   +H   L +A  Y+L  GGK++R  ++   A      H  
Sbjct: 15  RCNQRLAELPFDIASHSEAAAEHISELQNAYLYSLASGGKRVRPAILYFAAQCVGGGHCE 74

Query: 72  AL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE- 129
           +L +   A+E +H YSLIHDDLP+MD+  +RRGKP++H  Y+E TAI+ G+GL   AFE 
Sbjct: 75  SLDQASCALELVHTYSLIHDDLPAMDDDDMRRGKPSLHKAYEESTAILVGDGLQARAFEL 134

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKT 185
           +I +P    +  IR  ++  L    GL+GM+GGQ +DIQ    D  +DE Q   +  MKT
Sbjct: 135 LIDAPNLTAEQKIR--MVKVLAEAAGLKGMVGGQYIDIQVTGADITLDELQA--MHSMKT 190

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   G I A+A++ +   L  +G ++G+ FQ+ADD+LD E D
Sbjct: 191 GALIRASLALGGIAANATEEQLAALDEYGTHIGLAFQVADDILDVEGD 238


>gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 292

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 4/195 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y+LL GGK+IR  L         V+         A+ECIH YSLIHDDLP+MD
Sbjct: 30  RLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHTYSLIHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG  T H  Y +  AI+AG+GLLTYAF++ S   T   +  + + +  L    G 
Sbjct: 90  NDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQLCSENTTASAEQ-KIKAIQCLATAAGP 148

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+GGQ  D+  E   I   ++ ++   KTGAL   A E G I+++A Q +      + 
Sbjct: 149 EGMVGGQAFDLLSEGKHIPLEELKVLHSGKTGALFNAAIELGLILSNADQAKYAAYMTYA 208

Query: 215 ENLGIIFQLADDLLD 229
             LG++FQ+ DD+LD
Sbjct: 209 NCLGLLFQITDDILD 223


>gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 292

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 4/195 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y+LL GGK+IR  L         V+         A+ECIH YSLIHDDLP+MD
Sbjct: 30  RLYESMNYSLLQGGKRIRPILTKAVLDAMKVDASLYKEFLCALECIHTYSLIHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG  T H  Y +  AI+AG+GLLTYAF++ S   T   +  + + +  L    G 
Sbjct: 90  NDDYRRGNLTNHKVYGDGMAILAGDGLLTYAFQLCSENTTASAEQ-KIKAIQCLATAAGP 148

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM+GGQ  D+  E   I   ++ ++   KTGAL   A E G I+++A Q +      + 
Sbjct: 149 EGMVGGQAFDLLSEGKHIPLEELKVLHSGKTGALFNAAIELGLILSNADQAKYAAYMTYA 208

Query: 215 ENLGIIFQLADDLLD 229
             LG++FQ+ DD+LD
Sbjct: 209 NCLGLLFQITDDILD 223


>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
          Length = 366

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 116/202 (57%), Gaps = 5/202 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   ++  ++RY+LL GGK++R  L      LF  +   A+    A+E IH  SL+HDDL
Sbjct: 96  QEPVKIHESMRYSLLAGGKRVRPLLSIAACELFGGHEAVAMPSACAVEMIHTMSLMHDDL 155

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY-AFEIISSPKTQLKDNIRSQLMLSLT 151
           P MDN  +RRGKPT H  Y E  A++AG+ +L   AF ++++    +  +   ++++ L 
Sbjct: 156 PFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALAAFHLVATETRGVSSDQVVRVIVELA 215

Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             IG +G++ GQ++D+    D  +    +  I + KT AL+  +   GAI+  A+  E E
Sbjct: 216 KAIGAEGLVAGQIVDVCSEGDPNLGLEDLEFIHRSKTAALLEGSVVMGAILGGANDEEVE 275

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
           ++R +   +G++FQ+ DD+LD 
Sbjct: 276 KVRKYARCIGLLFQVVDDILDV 297


>gi|187929506|ref|YP_001899993.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
 gi|309781717|ref|ZP_07676450.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA]
 gi|187726396|gb|ACD27561.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
 gi|308919358|gb|EFP65022.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA]
          Length = 303

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 4/215 (1%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++ L+ A   +T    RL +A+RYA LG GK++R  L     +L + +      V  A+E
Sbjct: 16  EVALERALPAETVSPQRLHAAMRYATLGAGKRVRPLLAHAAGALGDASPEALDGVSCAVE 75

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+ L T AF I+ + +  ++ 
Sbjct: 76  MIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGDALQTQAF-IVLAEQGAVRP 134

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
             R+ LM  L    G QGM GGQ +D+Q   I   + ++  + +MKTGAL+  +   GA+
Sbjct: 135 ATRAVLMGELARASGSQGMAGGQAIDLQSVGIALSQDELEAMHRMKTGALLRASLRMGAL 194

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A  +    E +  +   +G+ FQ+ DD+LD   D
Sbjct: 195 CAEVNAAALEHVDAYAGAVGLAFQVVDDILDVTAD 229


>gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
 gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
          Length = 300

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 20/208 (9%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDL 92
           +L SA+RY+++GG K++R  LV     +++ +     LTAL    A+EC+H YSLIHDDL
Sbjct: 33  KLHSAMRYSVIGGGKRVRPLLVYAVGQIYDADPENLDLTAL----AVECVHSYSLIHDDL 88

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +R GKPT H  + E  A++AG+ L   AF  +   +T+L    R +L+  L +
Sbjct: 89  PCMDNDILRHGKPTTHTAFGEAVAMLAGDALQPEAFLFLV--RTKLPAEQRIKLVELLAY 146

Query: 153 NIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQN 205
               +GM GGQ +D+     Q   I+E +  ++  MKTGAL+  +   GA       SQ+
Sbjct: 147 ASSTRGMCGGQAIDLSVVGNQKMTIEELR--LMHSMKTGALLKASVLLGAFAGKKTPSQH 204

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +L  +G  +G+ FQ+ DD+LD   D
Sbjct: 205 DLSQLEVYGNAIGLAFQIVDDILDVVGD 232


>gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
 gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
          Length = 296

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 121/204 (59%), Gaps = 4/204 (1%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  A+ Y+L  GGK++R  L+      FN        +  AIE IH YSLIHDDLP+M
Sbjct: 31  DTLKQAMTYSLKAGGKRVRPLLLLATLDGFNRPIEDGFDLACAIEMIHTYSLIHDDLPAM 90

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNI 154
           D+   RRG+PT H  Y E  AI+AG+ LLTY+FE+I+S     ++  ++  L+  L    
Sbjct: 91  DDDDTRRGQPTNHKVYGEAMAILAGDALLTYSFELITSMSAVREEPAKALTLVRELAKAS 150

Query: 155 GLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ+ DI+ E    T  ++  I   KTG L+ ++  +GA++A AS+ + E LR 
Sbjct: 151 GPCGMVGGQVADIEGENRSLTVQELADIHHHKTGDLLAYSIIAGAVLADASEEDLEHLRM 210

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           F   LG++FQ+ DD+LD E D  K
Sbjct: 211 FAIELGLLFQIKDDILDVEGDSDK 234


>gi|166711441|ref|ZP_02242648.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 291

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 9/212 (4%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+ A    T+   RL +A+R+A+LGG K++R  LV    +LF            A+E IH
Sbjct: 17  LEAALPSATRAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++        +R
Sbjct: 77  AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAA--ASASAELR 134

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
              M SL    G  GM GGQ LDI    Q + + + Q   +  +KTGAL+  +   GA+ 
Sbjct: 135 VGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQ--RMHALKTGALIRASVHMGALT 192

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             A+  +++RL  F + LG+ FQ+ DD+LD E
Sbjct: 193 GGAATADQQRLDEFADALGLAFQVRDDILDVE 224


>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
 gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
          Length = 295

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 16/215 (7%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +   ++ A+ Y+L  GGK++R  L  E   +   +   A+   AAIE IH YSLIHD
Sbjct: 25  EVGYQKTIMEAMNYSLSSGGKRLRPVLTLEACRIVGGDTDNAIPFAAAIEMIHTYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLM 147
           DLP++DN  +RRG+ T H  + E  AI+AG+ LL +A+E      T LK++I     +  
Sbjct: 85  DLPALDNDDLRRGRATNHKVFGEAMAILAGDALLNFAYE------TMLKESIGKENPERY 138

Query: 148 LSLTHNI----GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH 201
           L  T+ I    G+ GM+GGQ++D+Q E   I + ++  I + KT A+M     +GA +  
Sbjct: 139 LRATYEIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDYIHENKTAAMMVGCMRAGAAIGG 198

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A + + E +  +   +G+ FQ+ DD+LD   D  K
Sbjct: 199 ADEKQMELITDYANKIGLAFQIVDDILDIVGDEAK 233


>gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
 gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
          Length = 300

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 20/208 (9%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDL 92
           +L SA+RY+++GG K++R  LV     +++ +     LTAL    A+EC+H YSLIHDDL
Sbjct: 33  KLHSAMRYSVIGGGKRVRPLLVYAVGQIYDADPENLDLTAL----AVECVHSYSLIHDDL 88

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +R GKPT H  + E  A++AG+ L   AF  +   +T+L    R +L+  L +
Sbjct: 89  PCMDNDILRHGKPTTHAAFGEAVAMLAGDALQPEAFLFLV--RTKLPAEQRIKLVELLAY 146

Query: 153 NIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQN 205
               +GM GGQ +D+     Q   I+E +  ++  MKTGAL+  +   GA       SQ+
Sbjct: 147 ASSTRGMCGGQAIDLSVVGNQKMTIEELR--LMHSMKTGALLKASVLLGAFAGKKTPSQH 204

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +L  +G  +G+ FQ+ DD+LD   D
Sbjct: 205 DLSQLEVYGNAIGLAFQIVDDILDVVGD 232


>gi|85708529|ref|ZP_01039595.1| geranyltranstransferase [Erythrobacter sp. NAP1]
 gi|85690063|gb|EAQ30066.1| geranyltranstransferase [Erythrobacter sp. NAP1]
          Length = 304

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/240 (37%), Positives = 134/240 (55%), Gaps = 10/240 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
           N  L   L+     ID++ D  L      +    + RL+ A+RYA +GG K++R  L+  
Sbjct: 8   NDVLGDALKRVQGEIDSVFDAFL-----PVPHDTSARLVEAMRYAAMGGGKRVRPLLLVS 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L+ V+   AL   AA+E IH YSLIHDDLP MD+  +R GKPTVH  YD+ TA++AG
Sbjct: 63  TAELYGVDRTAALCAAAAVEAIHVYSLIHDDLPCMDDDDLRHGKPTVHKVYDDATAVLAG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDE---FIDETQ 176
           + L   AFEI++  +T     +RS+L+ +L   +       G  M  + DE     D   
Sbjct: 123 DALHALAFEILADSQTSADPFVRSELIATLGKASGMGGMAGGQMMDMVADEEGVEYDLRT 182

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +Q++KTGAL+  + E GAI+   +   +  LR +  ++G+ FQ+ADDLLD E D  K
Sbjct: 183 ITRLQQLKTGALLAASVEMGAILGKVAPEGRAHLRAYSRDIGLAFQIADDLLDVEGDADK 242


>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
 gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
          Length = 366

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 4/192 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP MDN  +
Sbjct: 105 SMRYSLLAGGKRVRPVLCLAACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDL 164

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGK T HI + E  A++AG+ LL +AFE I+     +      + +  L   IG +G++
Sbjct: 165 RRGKSTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSPLRIVRAVGELAKVIGAEGLV 224

Query: 161 GGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ++DI  E + E    Q+  I   KT  L+  A   GAI+   +  E E+LR +  ++
Sbjct: 225 AGQVVDICSEGLSEVGLEQLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSI 284

Query: 218 GIIFQLADDLLD 229
           G++FQ+ DD+LD
Sbjct: 285 GLLFQVVDDILD 296


>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
 gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
          Length = 297

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 131/235 (55%), Gaps = 15/235 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+E   R+D  LD  L +     +T+    L  A+RY++  GGK++R  L+     
Sbjct: 3   LKAYLKEQCARVDAALDSYLPR-----ETELPHSLHKAMRYSVFAGGKRVRPILMLAACQ 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +   A+    A+E IH YSLIHDDLP+MD+   RRG PT H  + E  AI+AG+ L
Sbjct: 58  AVGGDTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF---IDETQ 176
           LT AF+++S+P       + S+  L++ H I    G  GM+GGQ++D++ E    ID   
Sbjct: 118 LTEAFKLLSNPACAA--GVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPT 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           V  I   KTGAL+  A  +GA++  A + +   +  +G   G+ FQ+ADD+LD E
Sbjct: 176 VQYIHTHKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIE 230


>gi|289550707|ref|YP_003471611.1| Geranyltranstransferase (farnesyldiphosphate synthase)
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180239|gb|ADC87484.1| Geranyltranstransferase (farnesyldiphosphate synthase)
           [Staphylococcus lugdunensis HKU09-01]
          Length = 260

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 120/194 (61%), Gaps = 6/194 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+     + N ++   L   AA+E IH YSLIHDDLP+MD+   RRGK T H
Sbjct: 8   GGKRVRPLLLLLTLDMLNKDYQLGLATAAALEMIHTYSLIHDDLPAMDDDDYRRGKLTNH 67

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + E  A++AG+ LLT AF++IS+  TQL ++I+ +L+  L    G  GM+GGQ LD+Q
Sbjct: 68  KVFGEWKAVLAGDALLTKAFDVISND-TQLDNDIKVKLIQRLAFASGHLGMVGGQALDMQ 126

Query: 169 DEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E   +D + +  I + KTGAL+ FA  +   +A  +++  E L  F ++LG++FQ+ DD
Sbjct: 127 SETQAVDISTLEQIHRAKTGALLTFAVMAATDIAQVNEHVAEHLNLFSQHLGLMFQIKDD 186

Query: 227 LLDC---EEDLPKK 237
           LLD    E  L KK
Sbjct: 187 LLDVYGEESKLGKK 200


>gi|15224197|ref|NP_179452.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75268021|sp|Q9ZU77|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
           chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
           AltName: Full=Dimethylallyltranstransferase 7; AltName:
           Full=Farnesyl diphosphate synthase 7; AltName:
           Full=Farnesyltranstransferase 7; AltName:
           Full=Geranyltranstransferase 7; Flags: Precursor
 gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
           synthetase/farnesyltranstransferase [Arabidopsis
           thaliana]
 gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
          Length = 347

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 109/195 (55%), Gaps = 7/195 (3%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           AIRY+LL  GK++R  L      L       AL    A+E IH  SLIHDDLP MDN  +
Sbjct: 85  AIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDL 144

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  + E  A++AG+ L+++AFE +++  T +      + +  L   IG +G++
Sbjct: 145 RRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT-STAVSPARVVRAIGELAKAIGSKGLV 203

Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GQ++D+    +D+  V +     I   KT  L+  A   GAI+   S  E E+LR F  
Sbjct: 204 AGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFAR 263

Query: 216 NLGIIFQLADDLLDC 230
            +G++FQ+ DD+LD 
Sbjct: 264 CIGLLFQVVDDILDV 278


>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
          Length = 348

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 109/195 (55%), Gaps = 7/195 (3%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           AIRY+LL  GK++R  L      L       AL    A+E IH  SLIHDDLP MDN  +
Sbjct: 85  AIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDL 144

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  + E  A++AG+ L+++AFE +++  T +      + +  L   IG +G++
Sbjct: 145 RRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT-STAVSPARVVRAIGELAKAIGSKGLV 203

Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GQ++D+    +D+  V +     I   KT  L+  A   GAI+   S  E E+LR F  
Sbjct: 204 AGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFAR 263

Query: 216 NLGIIFQLADDLLDC 230
            +G++FQ+ DD+LD 
Sbjct: 264 CIGLLFQVVDDILDV 278


>gi|322434675|ref|YP_004216887.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 320

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 120/218 (55%), Gaps = 27/218 (12%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIEC-----IHCYSLIHDDLPS 94
           A+R++   GGK++R  L  E A + +   LT AL   AA        IH YSLIHDDLP+
Sbjct: 39  AMRHSTFAGGKRLRPILALEAARMVSGGTLTPALETAAAELGAALEMIHTYSLIHDDLPA 98

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLT 151
           +DN  +RRG+PT H+ + E TAI+AG+ L T AF+ I+   +P   +   +R ++  ++ 
Sbjct: 99  LDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIANLHAPAATVVSILR-EVSAAVA 157

Query: 152 HNIG---------LQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMA 200
             +G           GM+GGQ++DI+ E +  T   V  I + KTGAL+  +  +G ++ 
Sbjct: 158 TGVGSVGDLHTSLPPGMIGGQVMDIESEGVKPTAELVEAIHRAKTGALITVSVVAGGLLG 217

Query: 201 HASQNEK-----ERLRCFGENLGIIFQLADDLLDCEED 233
              Q         RLR FG+  G+ FQ+ DD+LD  +D
Sbjct: 218 LGDQPSTTHDTIARLRTFGQKAGLAFQIVDDVLDMTQD 255


>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
          Length = 370

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            H  ++ +A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDL
Sbjct: 102 NHPLKIHAAMRYSLLAGGKRVRPILCIAACELVGGDEAAAMPSACAMEMIHTMSLIHDDL 161

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H  + E TAI+AG+ +L+ AFE I+     +      +++  L  
Sbjct: 162 PCMDNDDLRRGKPTNHKMFGEETAILAGDAMLSLAFEHIARATKNVSPERVVRVITELGS 221

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G +G++ GQ++D+  E   ++   +  I   KT  L+  A   GAI   A     ER+
Sbjct: 222 AVGSEGLVAGQIVDVCSEGKEVNVKDLEYIHIHKTAKLLEAAVVCGAIAGGADDESIERV 281

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +   +G++FQ+ DD+LD
Sbjct: 282 RKYARCIGLLFQVIDDILD 300


>gi|78048472|ref|YP_364647.1| geranyltranstransferase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78036902|emb|CAJ24595.1| Geranyltranstransferase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 291

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 9/204 (4%)

Query: 33  TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T    RL +A+R+A+LGG K++R  LV    +LF            A+E IH YSL+HDD
Sbjct: 25  THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     +  +R   + SL 
Sbjct: 85  LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATASASAE--LRVSWIQSLA 142

Query: 152 HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              G  GM GGQ LDI    Q + + + Q   +  +KTGAL+  A   GA+   A+  ++
Sbjct: 143 TAAGAAGMCGGQALDIDATGQLQSLQDLQ--RMHALKTGALIRAAVRMGALTGGAAAADQ 200

Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
           +RL  F + LG+ FQ+ DD+LD E
Sbjct: 201 QRLDEFADALGLAFQVRDDILDVE 224


>gi|329118147|ref|ZP_08246859.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465807|gb|EGF12080.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 297

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 10/223 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTAL 73
           + +T+L++L+       Q  H      A+RYA+LGG K++R  LV   + L   +     
Sbjct: 16  QTETLLENLMPSENHAPQELHR-----AMRYAVLGGGKRLRPLLVLAASELGQADPDATA 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              AA+E IH YSL+HDD+P+MDN  +RRGKPT HI Y E  A++AG+ L T AF+II+ 
Sbjct: 71  HAMAAVELIHAYSLVHDDMPAMDNDSLRRGKPTCHIAYGEAAALLAGDALQTLAFDIITR 130

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCF 191
           P   L    R Q+  +L    G  GM GGQ +D+ +  + + ++++  + ++KTGAL+  
Sbjct: 131 PAA-LPAERRLQMAATLARASGSLGMAGGQAIDLANVGKTLTQSELEHMHRLKTGALIRA 189

Query: 192 ACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A   G +            L  +   LG+ FQ+ DD+LDC  D
Sbjct: 190 AVRLGGLACPDLDDTALHSLDSYAAALGLAFQVIDDVLDCAAD 232


>gi|238765452|ref|ZP_04626373.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638]
 gi|238696346|gb|EEP89142.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638]
          Length = 299

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 11/206 (5%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLP 93
           N  L+ A+RY A+LGGK++R +LV     +F ++ LT+L    AAIEC+H YSLIHDDLP
Sbjct: 29  NSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTSLDAPAAAIECVHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+PT H+++ E  AI+AG+ L T AF I++ +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPEVADKDRLSMIAELAY 147

Query: 153 NIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207
             G+ GM GGQ LD++ E     +DE +   I + KTGAL+  A   GA+ A     E  
Sbjct: 148 ASGVAGMCGGQALDLEAEARQITLDELE--RIHRHKTGALIRAAVRLGALAAGTPGREVL 205

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +   +G+ FQ+ DD+LD   D
Sbjct: 206 PLLDRYANAIGLAFQVQDDILDVIGD 231


>gi|302879474|ref|YP_003848038.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
 gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
          Length = 297

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 9/202 (4%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+L GGK++R  L      L   +      V A++E IH YSL+HDD+P MD
Sbjct: 34  RLHQAMRYAVLEGGKRVRPLLAFAAGELTGADIARVDIVAASVELIHAYSLVHDDMPCMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS--LTHNI 154
           +  +RRGKPT H+QYDE TA++ G+ L T AF++++  + +L D  + Q+ +   L    
Sbjct: 94  DDVLRRGKPTCHVQYDEATALLVGDSLQTLAFQLLT--EHRLSDGPQQQMAMIRLLASAS 151

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211
           G +GM GGQ +D+ D       +  ++ M   KTGAL+  A   GA     S  +   L 
Sbjct: 152 GSRGMAGGQAIDL-DSVGKSLTLPELENMHIHKTGALIRAAVLLGAQCGAVSPVQLACLD 210

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + + +G+ FQ+ DD+LD E D
Sbjct: 211 HYAKCVGLAFQVVDDVLDAEAD 232


>gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 298

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 132/244 (54%), Gaps = 23/244 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN     +L   +K I+  L+  L       + Q       A+ Y+L+ GGK++R  L  
Sbjct: 1   MNREFKQELASRAKEIEDYLESCLQFEGVPGELQQ------AMEYSLMAGGKRVRPVLCL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +        L   + +E IH YSL+HDDLP+MDN  +RRGKPT H ++ E  AI+A
Sbjct: 55  AWGEMTGACTKDILPFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQ---DEFI 172
           G+GLLT AF ++      LK +  ++ +L    ++    G  GM+GGQ +D++    E +
Sbjct: 115 GDGLLTQAFAMM------LKTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESM 168

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRC--FGENLGIIFQLADDLLD 229
           +   +  +  MKTGAL+  AC SGAI+A +  +N ++ L    +G N+G+ FQ+ DD+LD
Sbjct: 169 ELVDLKGMHAMKTGALLRAACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILD 228

Query: 230 CEED 233
              D
Sbjct: 229 VTGD 232


>gi|89069936|ref|ZP_01157269.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516]
 gi|89044490|gb|EAR50618.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516]
          Length = 289

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 116/202 (57%), Gaps = 15/202 (7%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L +A  YAL GGK +R+FLV E A L  +    AL   AAIEC+H YSL+HDDLP+MD+ 
Sbjct: 31  LEAASDYALEGGKGLRAFLVLEGARLCGLAPGAALGAAAAIECVHAYSLVHDDLPAMDDD 90

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIG 155
            IRRG+PTVH  +DE TAI+ G+ L   AFE +    +P  +L       L   L    G
Sbjct: 91  DIRRGRPTVHKAWDEATAILVGDALQALAFEEVLACDAPPERL-----VALARGLAEAAG 145

Query: 156 LQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            +GM+ GQMLDI  E     +    V  IQ  KTGAL+ ++  +GA +A A      R  
Sbjct: 146 ARGMVAGQMLDIAAESAVAPMTLADVERIQSHKTGALIVWSATAGAHLAGADPAPFAR-- 203

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +G  LG+ FQ+ADDLLD   D
Sbjct: 204 -YGAALGLAFQIADDLLDATGD 224


>gi|295100831|emb|CBK98376.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii L2-6]
          Length = 296

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 117/191 (61%), Gaps = 5/191 (2%)

Query: 42  AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A RY+LLGG K+IR+ LV     + + N   A +  AA+E +HCYSLIHDDLP MDN  +
Sbjct: 38  AARYSLLGGGKRIRAVLVLAVCDMLHGNAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDM 97

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKP+ H  + E TA++AG+ LLT AFE ++   T    ++      +L    G +GM+
Sbjct: 98  RRGKPSCHKAFGESTAMLAGDVLLTEAFEAVAGAPTPA--SVCVHAAQALGAGAGSRGMV 155

Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
            GQ LD++ E +   E Q+ +I + KTGAL+  A + G   A A + +++ L  +   +G
Sbjct: 156 YGQELDLKYEALAAAEEQLRLIHRHKTGALINAAIQMGGAAAQADEVQRKALEAYAYGIG 215

Query: 219 IIFQLADDLLD 229
           ++FQ+ DD+LD
Sbjct: 216 LVFQIVDDVLD 226


>gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
 gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
          Length = 291

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95
           L +++RY+ + GGK++R  L      +     L A  +R   A+E +H YSLIHDDLP+M
Sbjct: 29  LAASMRYSTMAGGKRLRPTLTLATVEILG-GQLDADVMRAATALELLHTYSLIHDDLPAM 87

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG PT H ++    A +AG+GLLT AF+ ++     L   ++S+L L L    G
Sbjct: 88  DNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTD--NHLPAAVKSRLALELAKAAG 145

Query: 156 LQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+ GQ  DI+   + +   Q+  + + KTGAL+ +A  +G I+    +  +  L  F
Sbjct: 146 PAGMVAGQARDIEGTGQQLSLDQLRYLHRQKTGALLRYAVLAGGIITAQPEKVQRLLAQF 205

Query: 214 GENLGIIFQLADDLLDC 230
           G + G+ FQ+ DDL+D 
Sbjct: 206 GASYGLAFQIYDDLMDV 222


>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
           [Acinetobacter sp. ATCC 27244]
 gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
           [Acinetobacter sp. ATCC 27244]
          Length = 303

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L +A+ +A +LGGK++R  L    ASL  N N     R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN----IRSQLMLSL 150
           MDN  +RRG+PT H+ + E TA++AG+ L + AFEI+ S   +L D     I SQ++L  
Sbjct: 94  MDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILGS---RLFDEQGQGIDSQIVLKQ 150

Query: 151 THNIGLQG--MLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
              +      M+ GQ+LD+Q E   +D+T++  I + KTGAL+  A   GA+   A  + 
Sbjct: 151 MQILATASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDP 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR FG+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQFGQTIGLAFQVQDDILD 234


>gi|226329091|ref|ZP_03804609.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198]
 gi|225202277|gb|EEG84631.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198]
          Length = 310

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/194 (43%), Positives = 115/194 (59%), Gaps = 5/194 (2%)

Query: 42  AIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y ALLGGK++R FLV     +F V  L      AAIECIH YSLIHDDLP+MD+  +
Sbjct: 43  AMHYGALLGGKRLRPFLVYAVGEMFKVPALNLDAPAAAIECIHAYSLIHDDLPAMDDDDL 102

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRGKPT HI++ E  AI+AG+ L   AFEI++ +P   +    R  ++  L    GL GM
Sbjct: 103 RRGKPTCHIEFGEANAILAGDALQALAFEILAKNPMPDVAITDRVAMIAELATASGLAGM 162

Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGEN 216
            GGQ LD+  +D+ ID   +  I   KTGAL+  A   GA  A +  ++    L  +  +
Sbjct: 163 CGGQALDLEAEDKSIDLASLEKIHLHKTGALIRAAVRLGAFSAGSKGHDVLPALDKYAHS 222

Query: 217 LGIIFQLADDLLDC 230
           +G+ FQ+ DD+LD 
Sbjct: 223 IGLAFQVQDDILDV 236


>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410699|gb|ABP67703.1| farnesyl-diphosphate synthase [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 298

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 16/233 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L   L+   ++ID  LD LL + +        D +  A+RY++  GGK++R  L      
Sbjct: 6   LTEYLKYAQEKIDKHLDSLLGKNSP-------DVIYEAMRYSVFAGGKRLRPILCLLSYE 58

Query: 64  LFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           L +        L +  AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+AG+
Sbjct: 59  LLSGKEADEKVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGD 118

Query: 122 GLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176
            LL  A E+  +   + + K+N   +    L    G +GM+GGQ++D+ +   E  +E  
Sbjct: 119 ALLNKAAEVCFNWILRNKAKENF-IKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENL 177

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++ +   KT  L+  +C  GA +A A +        +G+NLG+ FQ+ DD+LD
Sbjct: 178 LYEMHLKKTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILD 230


>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
          Length = 299

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 135/246 (54%), Gaps = 23/246 (9%)

Query: 5   LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +  KL+E    + K+++  LD +L + +  +  Q       A+RY++  GGK++R  L  
Sbjct: 2   ISRKLEEYINLSQKKVEKHLDGILKERSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54

Query: 60  ECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               +F+ +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  A
Sbjct: 55  LSYQMFSEDKEIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIA 114

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS---LTHNIGLQGMLGGQMLDIQD---E 170
           I+AG+ LL  A E+       L+   R  L+ +   L    G++GM+GGQ++DI +   +
Sbjct: 115 ILAGDALLNLAAEVCMD--WILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQD 172

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +E  +F +   KT  L+  +C  GA++A A       L  +G+NLG+ FQ+ DD+LD 
Sbjct: 173 IKNEELLFEMHLKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDV 232

Query: 231 EEDLPK 236
             D  K
Sbjct: 233 IGDSKK 238


>gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ]
 gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ]
 gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ]
 gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ]
          Length = 295

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 126/224 (56%), Gaps = 10/224 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  L+ LL    + +Q     RL  A+RY+++ GGK++R  LV             A 
Sbjct: 12  RVDAALEALLQPPRAELQ-----RLYQAMRYSVVNGGKRVRPLLVYAACEALGGTPERAE 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL   AFE+++ 
Sbjct: 67  GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGLQALAFEVLTD 126

Query: 134 PKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190
           P+   +D  +R ++  +L    G  GM+GGQ +D++     +D   +  + + KTGAL+ 
Sbjct: 127 PRRNPRDAGLRLEMSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETMHRHKTGALIE 186

Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+ +  A + +   L  +   +G+ FQ+ DD+LD E D
Sbjct: 187 ASVRLGALASGRADETDLAALAVYARAIGLAFQVQDDILDVESD 230


>gi|222871917|gb|EEF09048.1| predicted protein [Populus trichocarpa]
          Length = 254

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 120/204 (58%), Gaps = 17/204 (8%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   A   +     A+R G A+E IH YSL+HDD+P MDN  +
Sbjct: 17  AMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDVL 76

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQ 157
           RRGKPTVH+Q+ E +A++AG+ L   AFE++     Q   + D ++++L   L    G Q
Sbjct: 77  RRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQTGSMPDALQARLCRLLGRAAGAQ 136

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGA------LMCFACESGAIMAHASQNEKER 209
           GM GGQ +D+      + E Q+  + ++KTGA      LM  AC+ G + A A Q     
Sbjct: 137 GMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHASVLMGAACKEG-VDAQAWQA---- 191

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LG+ FQ+ DD+LD   D
Sbjct: 192 LSDYGQALGVAFQVVDDILDVVAD 215


>gi|21243489|ref|NP_643071.1| farnesyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21109048|gb|AAM37607.1| geranyltranstransferase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 291

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 33  TQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T    RL +A+R+A+LGG K++R  LV    +LF            A+E IH YSL+HDD
Sbjct: 25  THAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDD 84

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE+++         +R   M SL 
Sbjct: 85  LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLA--AASASAELRVGWMQSLA 142

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208
              G  GM GGQ LDI D       +  +Q+M   KTGAL+  A   GA+   A+  +++
Sbjct: 143 TAAGAAGMCGGQALDI-DATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAALADQQ 201

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
           RL  F + LG+ FQ+ DD+LD E
Sbjct: 202 RLDEFADALGLAFQVRDDILDVE 224


>gi|13431546|sp|Q42698|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
           Short=GGPP synthase; Short=GGPS; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; Flags: Precursor
 gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
          Length = 357

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK++R  L      LF      A+    A+E IH  SL+HDDLP MD
Sbjct: 92  KIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMD 151

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E  A++AG+ LL +AFE I++    +      +++  L   IG 
Sbjct: 152 NDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGS 211

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++D+  E I +     +  I   KT AL+  +   GAI+  A+  +  +LR F
Sbjct: 212 EGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKF 271

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 272 ARCIGLLFQVVDDILD 287


>gi|237730397|ref|ZP_04560878.1| geranyltranstransferase [Citrobacter sp. 30_2]
 gi|226905936|gb|EEH91854.1| geranyltranstransferase [Citrobacter sp. 30_2]
          Length = 299

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 123/208 (59%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSL+HDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGQMFGVSLSTLDAPAAAVECIHAYSLMHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAPMPEVTDRDRIAMISELAQ 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD++ E   ++   +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLEAEGHQVELDALERIHRHKTGALIRAAVRLGAL----SAGDKGRE 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 CLPILDKYAESIGLAFQVQDDILDVVGD 231


>gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
 gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
          Length = 294

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 5/206 (2%)

Query: 32  QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T   ++L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HD
Sbjct: 25  ETAVPEKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+P MD+  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L
Sbjct: 85  DMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTD-AAALSPVQQAALVREL 143

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207
               G  GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+       E  
Sbjct: 144 ALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETM 203

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +   +G+ FQ+ DD+LD   D
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDVTTD 229


>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
          Length = 361

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 5/197 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK+IR  +      +   N L A+    A+E IH  SL+HDDLP MD
Sbjct: 97  KIHESMRYSLLAGGKRIRPMMCIAACEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMD 156

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIG 155
           N   RRGKP  H  Y E  A++ G+ LL+ +FE I ++ K   KD I  + +  L  ++G
Sbjct: 157 NDDFRRGKPISHKVYGEEMAVLTGDALLSLSFEHIATATKGVSKDRI-VRAIGELARSVG 215

Query: 156 LQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +G++ GQ++DI  E  D     +  I   KT  L+  +   GAIM   S  + E+LR F
Sbjct: 216 SEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKF 275

Query: 214 GENLGIIFQLADDLLDC 230
             ++G++FQ+ DD+LD 
Sbjct: 276 ARSIGLLFQVVDDILDV 292


>gi|291277196|ref|YP_003516968.1| geranyltranstransferase [Helicobacter mustelae 12198]
 gi|290964390|emb|CBG40240.1| geranyltranstransferase [Helicobacter mustelae 12198]
          Length = 287

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 113/189 (59%), Gaps = 7/189 (3%)

Query: 49  GGKKIRSFLV--TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R  L+    C+  F++    A     A+EC+H YSLIHDDLP MD+  +RRG PT
Sbjct: 39  GGKRFRPALLFAVVCSQNFSLAK-NAFLPALALECLHTYSLIHDDLPCMDDASLRRGYPT 97

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDEVTA + G+GL T++F +++  K  L  + R +L+  L+H  G+ GM+ GQ +D
Sbjct: 98  LHRSYDEVTATLVGDGLNTFSFYLLT--KAHLDPSTRLRLIEMLSHYGGIGGMVIGQAMD 155

Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +++ ++  +++ I   KT  L+  +   G ++A+    E   L  FG +LGI FQ+ 
Sbjct: 156 CYFENQHLEIEKLYAIHLNKTAKLIATSLCMGGVIANLPDGELRNLWDFGMDLGIFFQVR 215

Query: 225 DDLLDCEED 233
           DD++D  E+
Sbjct: 216 DDIIDRVEN 224


>gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1]
 gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 311

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 112/207 (54%), Gaps = 11/207 (5%)

Query: 38  RLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY A+ GGK++R  LV     LF+       R  AA+E IH YSL+HDD+P MD
Sbjct: 40  RLHEAMRYTAMDGGKRVRPLLVYAAGELFDTPRALLERAAAAVEMIHVYSLVHDDMPCMD 99

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS------- 149
           +  +RRGKPTVHI+YDE TA++ G+ L   AF+ +++P      +  + L          
Sbjct: 100 DDALRRGKPTVHIRYDEATALLVGDALQAQAFDTLAAPLESEAGSADAGLPARQLRMVKL 159

Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNE 206
           L    G  GM GGQ +D+      +   ++  + ++KTGAL+  A   GA+   A +  E
Sbjct: 160 LAEAAGSVGMCGGQAIDLASVGMTLSLAELEQMHRLKTGALLRAAVLLGALGGKALTAAE 219

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
              L  +   +G+ FQ+ DD+LD   D
Sbjct: 220 SAALDDYARAIGLAFQVVDDILDATAD 246


>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
 gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
          Length = 307

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 132/232 (56%), Gaps = 14/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L + S +++  +D       + +   + +++  A+RY+LL GGK++R  L      
Sbjct: 14  LKSYLSDRSCQVEAAID-------AALPVVYPEQIYEAMRYSLLAGGKRLRPILCLATCE 66

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +   A+    A+E +H  SLIHDDLP+MD+   RRGK T H  Y E  A++AG+ L
Sbjct: 67  MLGASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAGDAL 126

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           LTYAFE I++   Q  D    Q +L     L   +G +G++GGQ++D+  E   +DE  +
Sbjct: 127 LTYAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDEETL 186

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I   KT AL+  +  SGA++A AS+   +RLR + + +G+ FQ+ DD+LD
Sbjct: 187 TFIHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLD 238


>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 295

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 115/202 (56%), Gaps = 10/202 (4%)

Query: 42  AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+L  GGK++R  L+        +     L     +EC+H YSLIHDDLP+MDN   
Sbjct: 35  AMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDLPAMDNDDF 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GL 156
           RRGKPT H  + E  AI+AG+ LLT AFE+ +     L+  I ++ ++ +   +    G 
Sbjct: 95  RRGKPTNHKVFGEAIAILAGDALLTKAFELTAK---TLEQGIPAERVVRVIQELAVASGS 151

Query: 157 QGMLGGQMLDI-QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++D+   E   + +V + I   KT  L+ ++  +G I+A A++ E + L  +G
Sbjct: 152 EGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYG 211

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
            +LG+ FQ+ DDLLD   D  K
Sbjct: 212 RHLGLAFQIVDDLLDVVGDFQK 233


>gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis]
          Length = 272

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 124/202 (61%), Gaps = 10/202 (4%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  ++ Y+L  GGK++R  +V    + +  +    + VG A+E IH YSLIHDDLP M
Sbjct: 31  DSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCM 90

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154
           D+  +RRGKPT H  + E TA++AG+GLLT +F++I+S    + D + ++  L L + + 
Sbjct: 91  DDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITS---HVSDEVSAEKRLRLVNELI 147

Query: 155 ---GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM+GGQ+ D++  +  +   ++  I + KT  L+ F   +GAI+A A + + E 
Sbjct: 148 SAAGTEGMVGGQVADMEAGNRQVTLEELESIHERKTSKLLGFCVIAGAILADAPEEDIET 207

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
           LR F  ++GI FQ+ DD+LD E
Sbjct: 208 LRTFSSHIGIGFQIRDDILDLE 229


>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
 gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
          Length = 293

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 129/235 (54%), Gaps = 9/235 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L    K ID  LD  L + +   +T H      A+RY+L  GGK++R  L    A 
Sbjct: 3   LKSYLTARGKLIDQALDRFLPRASVKPRTIHK-----AMRYSLFAGGKRLRPALTLAAAE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +     AL    A+ECIH YSLIHDDLP MD+  +RRG+PT H  + E  A++AG+ L
Sbjct: 58  ACDGEVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT AFEI++  K   +  + + L+  L    G Q ++GGQ+ D++ E   I   ++  I 
Sbjct: 118 LTIAFEILAQAKETSRYKMPA-LIGELAGASGSQWLIGGQVADLEGEGKKISGAELKYIH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KT AL+  +   G + A+AS    + L  FG++LG+ FQ+ DD+LD  +   K
Sbjct: 177 RCKTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEK 231


>gi|289192774|ref|YP_003458715.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939224|gb|ADC69979.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22]
          Length = 317

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 12/198 (6%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ND+L +A ++ L  GGK+IR +L      L   N    L   AA+E IH Y+LIHDD+  
Sbjct: 22  NDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDNIREVLPAAAAVELIHNYTLIHDDI-- 79

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGKPTVH+ Y E  AI+AG+ L   AFE +S    ++KDN ++  +L +    
Sbjct: 80  MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVS----RIKDNKKAHEVLKILSKA 135

Query: 155 GLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            ++ +  GQ +D++ E      E  + MI+K KTGAL+  + E GA+MA  ++ E+E L+
Sbjct: 136 CVE-VCEGQAMDMEFENYYPTMEEYLEMIRK-KTGALLEASVEIGAVMADCNEEEREALK 193

Query: 212 CFGENLGIIFQLADDLLD 229
            + + +G+ FQ+ DD+LD
Sbjct: 194 EYAKRIGLTFQIQDDVLD 211


>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 299

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + +  +  ++L  ++RY+LL GGK++R  L      L       AL    A+E IH  SL
Sbjct: 27  ASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGELEKALPTAVALEMIHTMSL 86

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLPSMDN  +RRG+PT H  Y +  AI+AG+ LLT AFE++S     +      +++
Sbjct: 87  IHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAFEMVSIRTEGIPSERLLKII 146

Query: 148 LSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALM--CFACESGAIMAHAS 203
             L+   G  G++GGQ++D+  + + +D   +  I   KTGAL+  C  C  GA++  A 
Sbjct: 147 GELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKTGALLKACVTC--GALIGGAD 204

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
           +   + L  +   +G+ FQ+ DD+LD
Sbjct: 205 EKLLDALSIYARGIGLAFQIIDDILD 230


>gi|116491232|ref|YP_810776.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1]
 gi|290890777|ref|ZP_06553844.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429]
 gi|116091957|gb|ABJ57111.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1]
 gi|290479549|gb|EFD88206.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429]
          Length = 275

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)

Query: 29  SHMQTQHNDRLLSAIRYALLG-GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYS 86
           S+     +D +   I YAL   GK++R  L +   A+  NV + + +    A+E +H YS
Sbjct: 19  SNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEAATAVEFVHAYS 78

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDDLP MD+   RR + +   ++    A++ G+GLLT AF+ IS+    L ++IR +L
Sbjct: 79  LVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISN--LSLPESIRLRL 136

Query: 147 MLSLTHNIGLQGMLGGQMLDI--QD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           + +L    G   M+ GQ  D+  QD  E ID+ +   I  MKTGALM +A  +G I+A  
Sbjct: 137 IYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLE--FIHLMKTGALMTYAATAGGILAGL 194

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           S ++   L  +G NLGI FQ+ DDL D ++D
Sbjct: 195 SDDKLRALNIYGANLGIAFQIKDDLRDIKQD 225


>gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1]
 gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1]
          Length = 294

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 5/196 (2%)

Query: 42  AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA++GG K++R  L      L   +   +    AA+E IH YSL+HDD+P MD+  +
Sbjct: 35  AMRYAVMGGGKRVRPLLCHAAGELTGASEAASNAASAALEMIHVYSLVHDDMPCMDDDAL 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L    G  GM 
Sbjct: 95  RRGKPTVHVQYDEPTALLVGDALQSQAFVALTD-AAALSPQQQAALVRELALASGSIGMA 153

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENL 217
           GGQ +D+    + +   Q+  + +MKTGAL+  +   GA+       +  R L  +   +
Sbjct: 154 GGQAIDLASVGQMLTREQLETMHRMKTGALLRASVRMGALAGETPTADTMRALDAYAAAV 213

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LD   D
Sbjct: 214 GLAFQVVDDILDVTTD 229


>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
          Length = 318

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 132/231 (57%), Gaps = 15/231 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           L+E  K+I+  +D  L  T    +      L  ++RY AL GGK++R  LV   +     
Sbjct: 28  LRELQKQIEMAMDTALSATPDVTRFVPPS-LFESMRYSALGGGKRLRPVLVLLASEACGA 86

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           + L A+    A+E IHCYSLIHDDLP+MD+  +RRG+PT HI Y E TAI+AG+GLLT A
Sbjct: 87  DPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGEATAILAGDGLLTRA 146

Query: 128 FEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           FE+++   T++ +    +L L+    L    G  GM+GGQ  D+  E    T +  ++++
Sbjct: 147 FEVLA---TEISNK---ELALACVADLASAAGWCGMVGGQAADLAAETTPVTTLAELEQI 200

Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              KTG L+  A   G  +  AS  + E L  +G  +G+ FQ+ADDLLD E
Sbjct: 201 HHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVE 251


>gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
 gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
          Length = 297

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 134/222 (60%), Gaps = 6/222 (2%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L++ A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 11  KESKTFVEEQLVRYANQLQCP--NVLREAMTYSLEAGGKRLRPLLLFATLQAFEKERELG 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+GLLT+AF++++
Sbjct: 69  IGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVT 128

Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +   Q +    + +L L L    G +GM+ GQ+ D++ E   ++ +++  I K KTG L+
Sbjct: 129 AYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLL 188

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +A  +GA++A A+  ++++L  F + +G+ FQ+ DD+LD E
Sbjct: 189 EYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVE 230


>gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054]
 gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424]
 gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
 gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054]
 gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424]
 gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
          Length = 294

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 5/206 (2%)

Query: 32  QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T    +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HD
Sbjct: 25  ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+P MD+  +RRGKPTVH+QYDE TA++ G+ L + AF  ++  +  L    ++ L+  L
Sbjct: 85  DMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAEA-LSPVQQAALVREL 143

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207
               G  GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+       E  
Sbjct: 144 ALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETM 203

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +   +G+ FQ+ DD+LD   D
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDVTTD 229


>gi|118586761|ref|ZP_01544198.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus
           oeni ATCC BAA-1163]
 gi|118432849|gb|EAV39578.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus
           oeni ATCC BAA-1163]
          Length = 278

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)

Query: 29  SHMQTQHNDRLLSAIRYALLG-GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYS 86
           S+     +D +   I YAL   GK++R  L +   A+  NV + + +    A+E +H YS
Sbjct: 22  SNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEAATAVEFVHAYS 81

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDDLP MD+   RR + +   ++    A++ G+GLLT AF+ IS+    L ++IR +L
Sbjct: 82  LVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISN--LSLPESIRLRL 139

Query: 147 MLSLTHNIGLQGMLGGQMLDI--QD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           + +L    G   M+ GQ  D+  QD  E ID+ +   I  MKTGALM +A  +G I+A  
Sbjct: 140 IYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLE--FIHLMKTGALMTYAATAGGILAGL 197

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           S ++   L  +G NLGI FQ+ DDL D ++D
Sbjct: 198 SDDKLRALNIYGANLGIAFQIKDDLRDIKQD 228


>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
 gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
          Length = 312

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 116/205 (56%), Gaps = 3/205 (1%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + +  +  + L  ++RY+LL GGK++R  L      L   +   A+    A+E IH  SL
Sbjct: 40  AALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGDASLAMPTAVALEMIHTMSL 99

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP+MDN  +RRG+PT H  Y +  AI+AG+ LL+ AFE+++     +      +++
Sbjct: 100 IHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAFEMVAVRSEGVPPERLLKVV 159

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             L+   G  G++GGQ++D++ E   +D   +  I   KT AL+     +GA++  A  +
Sbjct: 160 AELSLVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTAALLRACVVTGALIGGADAS 219

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
           + + +R +   +G+ FQ+ DD+LD 
Sbjct: 220 QVDAMRTYANGIGLAFQIVDDILDV 244


>gi|227513485|ref|ZP_03943534.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577]
 gi|227524627|ref|ZP_03954676.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290]
 gi|227083358|gb|EEI18670.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577]
 gi|227088111|gb|EEI23423.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290]
          Length = 307

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           ++E + RI+ +L+  + Q           +L  ++ Y++  GGK++R  L    A+L   
Sbjct: 12  IKEWTPRINQVLESKIEQDTDQQ------KLFESMSYSVNAGGKRLRPLLT--IATLITF 63

Query: 68  NHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           N     + L+   A+E +H YSLIHDDLP+MDN  +RRGKPT H  Y    A +AG+GL 
Sbjct: 64  NQAITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATLAGDGLQ 123

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183
             AF+ +      L  + R QL L+L    G +GM  GQ  DI+ E     ++  +QK+ 
Sbjct: 124 ALAFQWVVD--NDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGT-RLKLHELQKLD 180

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             KTGAL+ +A  +G IMA   +++K+ L  F  N G  FQ+ DD+LD   D
Sbjct: 181 RNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGD 232


>gi|304389087|ref|ZP_07371131.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091]
 gi|304336960|gb|EFM03150.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091]
          Length = 298

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 117/196 (59%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H++Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +  +  +  +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|297588519|ref|ZP_06947162.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516]
 gi|297573892|gb|EFH92613.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516]
          Length = 271

 Score =  124 bits (312), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 6/202 (2%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +D++  A+RY ++    K++R  L      +FN +   +L    AIE IH YSL+HDDL 
Sbjct: 23  DDKIGEAMRYTIVDDSAKRLRPLLFLLTYQMFNESITESLNYALAIELIHNYSLVHDDLE 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN   RRGK TVH +Y E  A++ G+ LL Y+FE++S     +K+   ++    +   
Sbjct: 83  CMDNDEYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSES---IKNEFDAKCANYIVKK 139

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            G  GM+ GQ+LDI  E I E  +  I   KT  L+  +  S  I++    N   +L  +
Sbjct: 140 SGCFGMIKGQLLDIDSE-ISEKNIIEIYDKKTCNLLKASTVSAGILSRVGDNTLLKLEDY 198

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
             NLG+ FQ+ DD++D E DL 
Sbjct: 199 AFNLGMAFQIIDDIMDYENDLK 220


>gi|154147947|ref|YP_001405809.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP
           synthase) [Campylobacter hominis ATCC BAA-381]
 gi|153803956|gb|ABS50963.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Campylobacter hominis ATCC BAA-381]
          Length = 284

 Score =  124 bits (312), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 6/193 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           A+ Y L  GGK  R+ L            L+ A+ +  AIE IH YSLIHDDLPS+DN  
Sbjct: 31  ALNYMLFAGGKHFRAQLCLGVVETMAPKKLSKAMPIALAIEMIHTYSLIHDDLPSVDNAD 90

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRG  T+H +YDEV+AI+ G+ L T AF  IS  +  L DNI+ + +  L+ N G  GM
Sbjct: 91  FRRGIATIHKKYDEVSAILVGDALNTEAFYRIS--RADLNDNIKIKCVEILSKNAGSAGM 148

Query: 160 LGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQ +D   + + ++ +QV  + ++KTGAL+  +   GA ++   + + +++   G  L
Sbjct: 149 VLGQAIDCFFEKKQLEISQVEFLHRLKTGALIGASLALGATISEIPKEKTDKIYEIGLKL 208

Query: 218 GIIFQLADDLLDC 230
           G+ FQ+ DDL+D 
Sbjct: 209 GLAFQINDDLIDA 221


>gi|34557991|ref|NP_907806.1| geranylgeranyl pyrophosphate synthase [Wolinella succinogenes DSM
           1740]
 gi|34483709|emb|CAE10706.1| GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Wolinella succinogenes]
          Length = 286

 Score =  124 bits (312), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 117/203 (57%), Gaps = 8/203 (3%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
               +N+ L   +R    GGK+ R   L+   ++L  +   +A     A+E +H YSLIH
Sbjct: 24  FHPHYNEYLWEMVRN---GGKRFRPRLLLGVVSALAPLLVKSAYAPALALEILHTYSLIH 80

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MDN   RRG PT+H++YDE +A++AG+ L T+AF +++  +  L  + +  L+  
Sbjct: 81  DDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHAFYLLA--QAPLGSDTKVALVRE 138

Query: 150 LTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G  GM+ GQ LD   + + ++  ++  I   KTG L+  + + GAI+A  S+ E+
Sbjct: 139 LASAGGAGGMVLGQALDCYFEHQKLEIEKLRFIHLHKTGRLIAASLKMGAIIAALSKEEQ 198

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
            RL   G  LG++FQ+ DD++D 
Sbjct: 199 ARLEEIGLKLGLLFQVQDDIIDA 221


>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 294

 Score =  124 bits (312), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 122/209 (58%), Gaps = 12/209 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+RY++  GGK++R  L      L   +   AL V  +IE IH YSLIHDDLP+MDN
Sbjct: 30  IYEAMRYSVFAGGKRLRPVLCLSACELLGGDLKKALPVACSIELIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154
             +RRGKPT H  + E  AI+AG+GLL   +E++   +  L++    + +L   + I   
Sbjct: 90  DDLRRGKPTNHKVFGEAIAILAGDGLLNLGYEVLI--RHALENPEDYEKILKAANEIATA 147

Query: 155 -GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G +G++GGQ+ DI  Q+  +   ++  I + KT AL+  +  +GA MA AS+ E E LR
Sbjct: 148 SGCKGIIGGQVEDILSQNTELTYEELKYIHEHKTAALIEASVCAGAHMAGASEKEVELLR 207

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            +   +G+ FQ+ DD+LD    E+ L KK
Sbjct: 208 EYAGLIGLAFQIKDDILDVIGDEKTLGKK 236


>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
           DSM 5476]
 gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
           DSM 5476]
          Length = 300

 Score =  124 bits (312), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 125/202 (61%), Gaps = 9/202 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++ A+RY++  GGK+IR  L  E   +   +   AL    A+E IH YSLIHDDLP MD+
Sbjct: 37  VVDAMRYSVTAGGKRIRPVLTLEVCRMLGGDPHKALPFACAVELIHSYSLIHDDLPCMDD 96

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQ---LKDNIRSQLMLSLTHN 153
             +RRGKP+ HI + E TA++AG+ LLT AFE  S +P+T     ++ +R+  +LS    
Sbjct: 97  DAMRRGKPSCHIAFGESTALLAGDALLTLAFETASHAPQTHGTGCEETLRAISILSRL-- 154

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G+ GM+GGQ++D++ E   I+   +  +  +KTGAL+  AC+ GA  A A + + +++ 
Sbjct: 155 AGVHGMIGGQVIDLESEGRGIEYPVLHQMHLLKTGALIKAACQMGAAAAGAQEEDLDKIG 214

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + + LG+ FQ+ DD+LD   D
Sbjct: 215 EYADALGLAFQICDDILDVVGD 236


>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
 gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
          Length = 302

 Score =  124 bits (312), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 132/235 (56%), Gaps = 20/235 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E   ++D  LD+   +    + T     L+ A+RY+L  GGK++R  L    A     
Sbjct: 13  LEEKRVQVDAALDEYFPK-GDGLTTA----LIKAMRYSLFAGGKRLRPILCIAGAEAVGG 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L V  A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+GLLT A
Sbjct: 68  VGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLAGDGLLTEA 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI-----QDEFIDETQVF 178
           F +++SPK    +NI    +L +   I    G +GM+GGQ++DI       EF  ET  F
Sbjct: 128 FSLMTSPKAT--ENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEF--ETVKF 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +    KTGA++  +  SGAI A A ++  +    +G  +G+ FQ++DD+LD E D
Sbjct: 184 L-HTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGD 237


>gi|227510476|ref|ZP_03940525.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190128|gb|EEI70195.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 307

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 126/232 (54%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           ++E + RI+ +L+  + Q           +L  ++ Y++  GGK++R  L    A+L   
Sbjct: 12  IKEWTPRINQVLESKIEQDTDQQ------KLFESMSYSVNAGGKRLRPLLT--IATLITF 63

Query: 68  NHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           N     + L+   A+E +H YSLIHDDLP+MDN  +RRGKPT H  Y    A +AG+GL 
Sbjct: 64  NQTITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATLAGDGLQ 123

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183
             AF+ +      L  + R QL L+L    G +GM  GQ  DI+ E     ++  +QK+ 
Sbjct: 124 ALAFQWVVD--NDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGT-RLKLHELQKLD 180

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             KTGAL+ +A  +G IMA   +++K+ L  F  N G  FQ+ DD+LD   D
Sbjct: 181 RNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGD 232


>gi|303326969|ref|ZP_07357411.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
 gi|302862957|gb|EFL85889.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
          Length = 297

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 117/202 (57%), Gaps = 10/202 (4%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y+L  GGK++R  L   CA+L  +    AL   AAIE IH YSLIHDDLP+MD
Sbjct: 34  RLKESMLYSLQAGGKRLRPVLCLSCAALCGLEPQKALPFAAAIEMIHTYSLIHDDLPAMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKP+ H  +DE TAI+AG+GLLT AF I+          +R+   L+L    G 
Sbjct: 94  DDDLRRGKPSNHKAFDEATAILAGDGLLTDAFVIMCRAPVPPDRLLRAVAELALA--AGA 151

Query: 157 QGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            GM+GGQ  D+   +   +QV +     +  MKTGAL+  +C  G ++A         + 
Sbjct: 152 SGMVGGQEWDMI--YTGRSQVSLEELRGMHAMKTGALLRASCVCGGLLAGVDDKALRAIS 209

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FG +LG+ FQ+ADD+LD   D
Sbjct: 210 NFGSSLGVAFQIADDILDVVAD 231


>gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
 gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
          Length = 294

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 5/206 (2%)

Query: 32  QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T    +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HD
Sbjct: 25  ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+P MD+  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L
Sbjct: 85  DMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVREL 143

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207
               G  GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+       E  
Sbjct: 144 ALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSTETM 203

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +   +G+ FQ+ DD+LD   D
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDVTTD 229


>gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
 gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
          Length = 296

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 8/205 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A++Y+L  GGK++R  L    A + + +  +ALRVGA+IE +H YSLIHDDLPSMD+
Sbjct: 36  LVKAMKYSLFSGGKRLRPILTLMVAEMLDGDRDSALRVGASIELVHTYSLIHDDLPSMDD 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGKP+ H  +   TAI+AG+ LLT+AF I+S  K  L  +   +++  ++   G  
Sbjct: 96  DDFRRGKPSNHKVFGTATAILAGDALLTFAFNILS--KLNLPPDKVLKIIEVISQGAGHN 153

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ+LD+  +D+ I   ++  I   KTGAL   +  +GA  A+  + E   L  +  
Sbjct: 154 GMVGGQVLDLEAEDKEISLEELKKIHSGKTGALFKSSILAGAYCANPDRTELTALERYAR 213

Query: 216 NLGIIFQLADDLLDC---EEDLPKK 237
            LG+ FQ+ DD+LD    EE L K+
Sbjct: 214 YLGLTFQIVDDILDVTGNEEVLGKR 238


>gi|294635305|ref|ZP_06713803.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685]
 gi|291091314|gb|EFE23875.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685]
          Length = 301

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 124/207 (59%), Gaps = 13/207 (6%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMD 96
           L+ A+RY ALLGGK++R +LV     LF  + L+AL    AAIECIH YSL+HDDLP+MD
Sbjct: 33  LVGAMRYGALLGGKRLRPYLVYATGRLFGCD-LSALDAPAAAIECIHAYSLLHDDLPAMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG 155
           +  +RRG+PT HI++ E  AI+AG+ L T AF +++ SP   + D  R  ++  L H  G
Sbjct: 92  DDDLRRGQPTCHIKFGEAHAILAGDALQTLAFTLLTDSPMPGVADRDRLCMLSELAHASG 151

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAI----MAHASQNEKER 209
           + GM GGQ LD+  E   +D   +  I + KTGAL+  A   GA+      HA+    +R
Sbjct: 152 VAGMCGGQALDLAAEGQRVDLAALEQIHRHKTGALIRCAVRLGALAGGNAGHAALTLLDR 211

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
              +   +G+ FQ+ DD+LD   D  K
Sbjct: 212 ---YANAIGLAFQVQDDILDVVGDSSK 235


>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 332

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 131/230 (56%), Gaps = 11/230 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L+  +K ++  LD         +  Q+ +++  A+RY+LL GGK++R  L      
Sbjct: 41  LDSYLRAKAKAVNVALD-------KAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACE 93

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   N   A+    A+E +H  SLIHDDLP MD+  +RRGKPT H  + E TA++AG+ L
Sbjct: 94  LVGGNEDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLAGDAL 153

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L YAFE I+   T +  +   +++  L   +G +G++ GQ++DI  E      + +++ +
Sbjct: 154 LAYAFEHIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEILEYV 213

Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              KT  L+  A  SGAI+  AS++E  RL  +  N+G++FQ+ DD+LD 
Sbjct: 214 HTHKTAVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDV 263


>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
 gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
          Length = 297

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 110/200 (55%), Gaps = 9/200 (4%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+ Y+LL GGK++R  L    A +      + L +  A E  H  SLIHDDLP MD
Sbjct: 32  RLREAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDDLPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS----LTH 152
           N  +RRGKPT H+ Y E  A++AG+ L   AFE  ++    LK+    Q  +        
Sbjct: 92  NDSLRRGKPTNHVVYGESLALLAGDALFLDAFE--TALAGLLKNGAEPQRCVRALALFAQ 149

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERL 210
            +G +G+ GGQ+LD       + + F++    MKT  L+  +  +GAI+A A      RL
Sbjct: 150 ALGPEGICGGQVLDTDRASQTDERDFVVDVASMKTMVLIRASLCAGAILAGADGEALRRL 209

Query: 211 RCFGENLGIIFQLADDLLDC 230
             +GEN+G+ FQ+ADDLLDC
Sbjct: 210 MKYGENVGLAFQIADDLLDC 229


>gi|329770468|ref|ZP_08261847.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325]
 gi|328836323|gb|EGF85989.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325]
          Length = 286

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 113/201 (56%), Gaps = 6/201 (2%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +I Y+L+  GKKIR          +N+++     V  AIE +H YSL+HDDLP MDN
Sbjct: 32  LKESIIYSLVNDGKKIRPLSFLYLLKFYNIDYKEYFDVALAIELVHTYSLVHDDLPEMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              R GKPT H  Y +  A++ G+ +LT AFE++S  K+ + D ++  L+    +  G  
Sbjct: 92  DDYRWGKPTNHRVYGQDIAVLTGDSMLTLAFEVLS--KSNINDTLKVNLIQQFANYSGAM 149

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+ GQ+ D++ +   +D   + ++  +KTG L+    +    +A   +++ + +R FG+
Sbjct: 150 GMIAGQVYDVKQKNYQVDANYLKLMHSLKTGRLIELPLDFACKIAR-KESDLDYIRSFGK 208

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
            LGI +Q+ DD+LD   +  K
Sbjct: 209 ELGIAYQIKDDILDYYGEFEK 229


>gi|295090870|emb|CBK76977.1| Geranylgeranyl pyrophosphate synthase [Clostridium cf.
           saccharolyticum K10]
          Length = 298

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 12/233 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  +L + ++  + I+   L Q   H +T     +  A+ Y++  GGK++R  L+ E   
Sbjct: 3   LKEQLLQYTRETEEIVYSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVYR 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF           AAIE IH  SLIHDDLP MDN   RRGK T  + Y    A++AG+ L
Sbjct: 58  LFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177
           L YA E  S       D + +    + +  L+   G+ GM+GGQ +D++  ++ +   ++
Sbjct: 118 LIYAVETASRAFLSGADAVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             I ++KTGAL+  +   GA++A AS+ E + +     N+G+ FQ+ DD+LD 
Sbjct: 178 DFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDV 230


>gi|261856267|ref|YP_003263550.1| polyprenyl synthetase [Halothiobacillus neapolitanus c2]
 gi|261836736|gb|ACX96503.1| Polyprenyl synthetase [Halothiobacillus neapolitanus c2]
          Length = 309

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 125/236 (52%), Gaps = 20/236 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL--- 64
            Q       T  D  L Q   +M  +   RL  AI +A++ GGK++R  LV   ASL   
Sbjct: 12  FQSWQSDFQTAFDIRLKQRLGNMLGESPQRLKDAIGHAVIDGGKRLRPILVVLGASLDST 71

Query: 65  ------FNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                  N   L  L   A AIE IH YSLIHDDLPSMDN  +RRGKPTVH  +DE TAI
Sbjct: 72  PGSLPDPNDPRLEQLWNAAVAIELIHGYSLIHDDLPSMDNDDLRRGKPTVHRVFDEATAI 131

Query: 118 IAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174
           +AG+ L + AF +++ +P+T +K  +    +LS     G   M+ GQ LD+    +    
Sbjct: 132 LAGDALQSLAFSLLADAPQTDVKTRLNWVSLLS----TGANRMVFGQQLDLNPPAQIPAL 187

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ++  + ++KTGAL+  A   GA    +S  ++  L  F   LG+ FQ+ DD+LD 
Sbjct: 188 AELTRMHELKTGALLYAALMMGA--NQSSAEDRAALEAFIRPLGLAFQIQDDILDA 241


>gi|295116024|emb|CBL36871.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
           SM4/1]
          Length = 298

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 12/233 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  +L + ++  + I+   L Q   H +T     +  A+ Y++  GGK++R  L+ E   
Sbjct: 3   LKEQLLQYTRETEEIVYSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVYR 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF           AAIE IH  SLIHDDLP MDN   RRGK T  + Y    A++AG+ L
Sbjct: 58  LFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177
           L YA E  S       D + +    + +  L+   G+ GM+GGQ +D++  ++ +   ++
Sbjct: 118 LIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             I ++KTGAL+  +   GA++A AS+ E + +     N+G+ FQ+ DD+LD 
Sbjct: 178 DFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDV 230


>gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
 gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
          Length = 293

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 6/206 (2%)

Query: 32  QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T    +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HD
Sbjct: 25  ETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  +S     L    ++ L+  L
Sbjct: 85  DMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF--VSLTSDVLAPAQQAALVREL 142

Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEK 207
               G  GM GGQ +D+      +   Q+  + +MKTGAL+  A   GA+   A   N  
Sbjct: 143 ALASGSIGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRMGALAGEAPDANAM 202

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +   +G+ FQ+ DD+LD   D
Sbjct: 203 RSLDAYSAAVGLAFQVVDDILDVTTD 228


>gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
           geranyltranstransferase [Melissococcus plutonius ATCC
           35311]
 gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
           geranyltranstransferase (farnesyldiphosphate synthase)/
           geranylgeranyl pyrophosphate synthetase [Melissococcus
           plutonius ATCC 35311]
          Length = 296

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 12/231 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLT 71
           K ID I  ++     SH   Q    L  A+ Y++  GGK++R  L+    + FN      
Sbjct: 10  KHIDRIEKEMANFIESHTSDQS---LKKAMLYSIQAGGKRLRPLLLLATINSFNCPIEQG 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A +  AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF+++
Sbjct: 67  AYQTAAALEMLHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEALAILAGDGLLTGAFQLL 126

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +    +    I    +L  T   G +GM+ GQ  D+Q E   ++  ++  + + KTGAL+
Sbjct: 127 ALSTIEAGKKILLTQLLGQT--AGTEGMVAGQSGDLQGEKKALNLQELSEVHRKKTGALI 184

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
            F+  +G I+A+ S+     L+      G+ FQ+ DDLLD    EE   KK
Sbjct: 185 EFSFMAGGILANQSEEIIYLLKQLANAFGLAFQIRDDLLDVIGSEEKQGKK 235


>gi|283797528|ref|ZP_06346681.1| geranyltranstransferase [Clostridium sp. M62/1]
 gi|291074897|gb|EFE12261.1| geranyltranstransferase [Clostridium sp. M62/1]
          Length = 298

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 12/233 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  +L + ++  + I+   L Q   H +T     +  A+ Y++  GGK++R  L+ E   
Sbjct: 3   LKEQLLQYTRETEEIVFSYLPQETGHQKT-----IFEAMNYSVRAGGKRLRPLLMREVYR 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF           AAIE IH  SLIHDDLP MDN   RRGK T  + Y    A++AG+ L
Sbjct: 58  LFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177
           L YA E  S       D + +    + +  L+   G+ GM+GGQ +D++  ++ +   ++
Sbjct: 118 LIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREKL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             I ++KTGAL+  +   GA++A AS+ E + +     N+G+ FQ+ DD+LD 
Sbjct: 178 DFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDV 230


>gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
 gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
          Length = 293

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 6/206 (2%)

Query: 32  QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T    +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HD
Sbjct: 25  ETIEPAKLHEAVRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  ++S    L    ++ L+  L
Sbjct: 85  DMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVALTS--DVLAPAQQAALVREL 142

Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEK 207
               G  GM GGQ +D+      +   Q+  + +MKTGAL+  A   GA+   A   N  
Sbjct: 143 ALASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTGALLRAAVRMGALAGEAPDANAM 202

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +   +G+ FQ+ DD+LD   D
Sbjct: 203 RSLDAYSAAVGLAFQVVDDILDVTTD 228


>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 295

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 130/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  LD L    A  +     DRL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALDGLFQAPAPEL-----DRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ + HA Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230


>gi|268680553|ref|YP_003304984.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618584|gb|ACZ12949.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 286

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 11/189 (5%)

Query: 48  LGGKKIRSFL----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           +GGK+ R  L    V   A L   N   AL V   +E +H YSLIHDDLP MDN  +RRG
Sbjct: 38  VGGKRFRPLLLLSVVEASAPLLFEN---ALHVSLGLEMMHTYSLIHDDLPCMDNAALRRG 94

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            PT+H+ YDE TA++ G+ L T+AF  I++    L   I+ +L+  L  + G+ GM+ GQ
Sbjct: 95  HPTLHVTYDETTAVLIGDALNTHAFYRIAN--APLSAEIKVRLVSILAGDAGIYGMVLGQ 152

Query: 164 MLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            LD   +D+ +D  Q+  +   KT  L+  +   GA++    +  +E +  FG  LG++F
Sbjct: 153 ALDCFFEDKRLDVEQLSFLHVHKTAKLIAASLLMGAVICELDKATQETVYAFGLRLGLLF 212

Query: 222 QLADDLLDC 230
           Q+ DD++D 
Sbjct: 213 QIQDDIIDA 221


>gi|172056944|ref|YP_001813404.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
 gi|171989465|gb|ACB60387.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
          Length = 289

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 125/204 (61%), Gaps = 6/204 (2%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           DRL  A+ Y+L  GGK++R  L+      + V+  T     AA+E IH YSLIHDDLP+M
Sbjct: 26  DRLREAMLYSLDAGGKRVRPALIYAVLDAYGVDRKTGDATAAALEMIHTYSLIHDDLPAM 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG+PT HI++DE TAI+AG+ LLT AF  +   +T     ++ +L+  L    G
Sbjct: 86  DDDDMRRGRPTNHIEFDEATAILAGDALLTNAFTCLL--ETMAAAEVKVKLLERLAAAAG 143

Query: 156 LQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             GM+GGQ+ D+  E     D  ++  I + KTGAL+ FA E+G I+A  +  + E+L+ 
Sbjct: 144 AAGMVGGQLDDMLGERGGISDAEELESIHRRKTGALLIFAVEAGGILAGVADEDLEQLKR 203

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           +G +LGI FQ+ DD+LD   D  K
Sbjct: 204 YGRHLGIAFQIQDDILDVTGDADK 227


>gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
 gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
          Length = 297

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 131/222 (59%), Gaps = 6/222 (2%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K     +++ L++ A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 11  KESKAFVEEQLVRYANQLQC--PNVLREAMIYSLEAGGKRLRPLLLFATLQAFEKERELG 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+GLLTYAF+ ++
Sbjct: 69  IGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQAVT 128

Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +   Q ++   + +L L L    G +GM+ GQ+ D++ E   ++   +  I K KTG L+
Sbjct: 129 AYDHQDVQAETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLEREGLEYIHKHKTGRLL 188

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +A  +GAI+A A+  ++E+L  F + +G+ FQ+ DD+LD E
Sbjct: 189 EYAVLAGAILAGATPEQEEKLLAFAKYIGLAFQIRDDILDVE 230


>gi|183219510|ref|YP_001837506.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909652|ref|YP_001961207.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774328|gb|ABZ92629.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777932|gb|ABZ96230.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 307

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 17/212 (8%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVT----ECASLFNV----NHLTALRVGAAIECIHCYSLI 88
           R+  A  Y+L  GGK++R   V     E   LF+      H +      A+ECIH YSLI
Sbjct: 33  RITEACLYSLHAGGKRVRPIFVINSFFEPNDLFSSEPFDTHQSVFLAALAVECIHTYSLI 92

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN   RRGKPT H Q+DE TAI+AG+ L + +F+++S       + +R  + +
Sbjct: 93  HDDLPAMDNDDTRRGKPTCHKQFDEATAILAGDTLNSLSFQLLSMMDANDPNLLRDSIQI 152

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            L    G+ GM+ GQM DI++E        E+++  I + KTGAL+  +   G  +  A 
Sbjct: 153 -LHQGAGMTGMILGQMEDIEEEKNPSSNARESKLESIHEKKTGALITSSFLLGNRL-RAD 210

Query: 204 QNEKE-RLRCFGENLGIIFQLADDLLDCEEDL 234
             E+E  L  + + +G++FQ+ DD+LD E +L
Sbjct: 211 WKEREFVLTRYAKEIGLLFQITDDILDVEGNL 242


>gi|84624779|ref|YP_452151.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188577762|ref|YP_001914691.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84368719|dbj|BAE69877.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188522214|gb|ACD60159.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 291

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/199 (41%), Positives = 120/199 (60%), Gaps = 9/199 (4%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+R+A+LGG K++R  LV    +LF            A+E IH YSL+HDDLP+MD
Sbjct: 30  RLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVHI +DE TAI+AG+ L T AFE++++        +R   M SL    G 
Sbjct: 90  DDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAA--ASASAELRVGWMQSLATAAGA 147

Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM GGQ LDI    Q + + + Q   +  +KTGAL+  +   GA+   A+  +++RL  
Sbjct: 148 AGMCGGQALDIDATGQLQPLQDLQ--RMHALKTGALIRASVHMGALTGGAATADQQRLDE 205

Query: 213 FGENLGIIFQLADDLLDCE 231
           F + LG+ FQ+ DD+LD E
Sbjct: 206 FADALGLAFQVRDDILDVE 224


>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 299

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 12/208 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPS 94
           +  A+RY++  GGK++R  L      + + + +     L + +AIE IH YSLIHDDLP+
Sbjct: 33  IYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQIVDEKILDIASAIELIHTYSLIHDDLPA 92

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS---LT 151
           MDN  +RRGKPT H+ + E  AI+AG+ LL  A E+       L+   R  L+ +   L 
Sbjct: 93  MDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMD--WILRYGCRENLIKAAKYLF 150

Query: 152 HNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
              G++GM+GGQ++DI +   D   E  +F +   KT  L+  +C  GA++A A  +   
Sbjct: 151 WASGVEGMIGGQVIDITNSGQDIKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVS 210

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L  +G+NLG+ FQ+ DD+LD   D  K
Sbjct: 211 DLEEYGKNLGLAFQIRDDVLDVIGDSKK 238


>gi|192362196|ref|YP_001983789.1| geranyltranstransferase [Cellvibrio japonicus Ueda107]
 gi|190688361|gb|ACE86039.1| geranyltranstransferase [Cellvibrio japonicus Ueda107]
          Length = 295

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 126/203 (62%), Gaps = 11/203 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR----VGAAIECIHCYSLIHDDL 92
           +L +A+RY+L  GGK++R  L    AS   +N   +L+    + AA+EC+H YSL+HDDL
Sbjct: 32  QLRAAMRYSLFNGGKRVRPILA--YASALAINPHISLKQVDPIAAAVECLHAYSLVHDDL 89

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MD+  +RRGKPT HI ++E TAI+AG+GL T AFE++ S   +   +IR QL+  L  
Sbjct: 90  PAMDDDDLRRGKPTCHIAFNEATAILAGDGLQTLAFELLGS--IEAPADIRIQLIQVLAK 147

Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G++GM+ GQ +D+   ++ +   Q+  + + KTGAL+  +   GA+ A A+  +   L
Sbjct: 148 GSGVEGMVLGQAIDLAAVEQQLTLEQLETMHRYKTGALIRASVTMGALFAGANNTQLAAL 207

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +   +G+ FQ+ DD+LD   D
Sbjct: 208 DQYASAIGLAFQVQDDILDVISD 230


>gi|183601043|ref|ZP_02962536.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827]
 gi|188019381|gb|EDU57421.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827]
          Length = 305

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 5/197 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +A+++ ALLGGK++R FL     S+  V+ +      AA+ECIH YSLIHDDLP+MD+
Sbjct: 38  LAAAMKHGALLGGKRLRPFLTYTVGSMLGVDSVNLDAPAAAVECIHAYSLIHDDLPAMDD 97

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  AI+AG+ L T AF+++SS +   + D  R  ++  L +  GL
Sbjct: 98  DDLRRGQPTCHIKFGEGNAILAGDALQTLAFQLLSSAEMPDVTDKDRIAMLSELAYASGL 157

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213
            GM GGQ LD++ E   +D   +  I + KTGAL+  A   GA  A    ++    L  +
Sbjct: 158 AGMCGGQALDLEAEGKRVDLAALERIHQHKTGALIRAAIRMGAYAAGIKGHKALPALDKY 217

Query: 214 GENLGIIFQLADDLLDC 230
            E++G+ FQ+ DD+LD 
Sbjct: 218 AESIGLAFQVQDDILDV 234


>gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
 gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
 gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
 gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
          Length = 297

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 133/222 (59%), Gaps = 6/222 (2%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K   T +++ L + A+ +Q    + L  A+ Y+L  GGK++R  L+      F       
Sbjct: 11  KESKTFVEEQLARYANQLQCP--NVLREAMTYSLEAGGKRLRPLLLFATLQAFEKERELG 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+GLLT+AF++++
Sbjct: 69  IGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVT 128

Query: 133 SPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +   Q +    + +L L L    G +GM+ GQ+ D++ E   ++ +++  I K KTG L+
Sbjct: 129 AYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLL 188

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +A  +GA++A A+  ++++L  F + +G+ FQ+ DD+LD E
Sbjct: 189 EYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVE 230


>gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
           PC184]
 gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
           PC184]
          Length = 294

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 5/206 (2%)

Query: 32  QTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T    +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HD
Sbjct: 25  ETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+P MD+  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L
Sbjct: 85  DMPCMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVREL 143

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK- 207
               G  GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+       E  
Sbjct: 144 ALASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSAETM 203

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +   +G+ FQ+ DD+LD   D
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDVTTD 229


>gi|237740341|ref|ZP_04570822.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
 gi|229422358|gb|EEO37405.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
          Length = 298

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 131/243 (53%), Gaps = 13/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + +   + YALL GGK++R FL+ 
Sbjct: 1   MNSDFQVYLKEKTNFFETELKKELKELS------YPETIAKGMEYALLNGGKRLRPFLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N +    ++    IE IH YSL+HDDLP++DN   RRGK T H  + E  AI+ 
Sbjct: 55  TTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDIQDE--FIDETQ 176
           G+ LLTYAF ++S     +    +   ++S T    G+ GM+GGQM+DI+ E   I+   
Sbjct: 115 GDALLTYAFYMLSEKNLNILSFEQITKIISKTSAYSGVNGMIGGQMIDIESENKKINLET 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I K KTG L+    E   I+A  S++++  L  + E +G+ FQ+ DD+LD E   ED
Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFED 234

Query: 234 LPK 236
           L K
Sbjct: 235 LGK 237


>gi|78485732|ref|YP_391657.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2]
 gi|78364018|gb|ABB41983.1| farnesyl-diphosphate synthase [Thiomicrospira crunogena XCL-2]
          Length = 291

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 11/221 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
           R++  L  LL Q     QT +   LL AI+YA L  GK++R  LV       N++ L  L
Sbjct: 11  RVNQKLKALLDQ-----QTSYPASLLEAIKYATLNNGKRLRPALVYAVGESMNIS-LDKL 64

Query: 74  RVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
              A A+E IH YSL+HDDLP+MD+  +RRG+PT HIQ+DE TAI+ G+   T AFE +S
Sbjct: 65  DAAACAVELIHSYSLVHDDLPAMDDDDLRRGQPTCHIQFDEATAILVGDAQQTLAFEALS 124

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
                L D+ + +L+  L+H  G  GM+GGQ++DIQ      + +Q+  + +MKTGAL+ 
Sbjct: 125 Q-DAFLADSDKVKLITLLSHASGGAGMIGGQIIDIQSNGHLPELSQLQKMHEMKTGALIT 183

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +   GA  +     ++  L   G+ +G+ FQ+ DD+LD E
Sbjct: 184 ASLLMGAAQSTHYPEKQPGLAKLGQKIGLAFQIHDDILDIE 224


>gi|163816790|ref|ZP_02208153.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759]
 gi|158448047|gb|EDP25042.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759]
          Length = 313

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 126/231 (54%), Gaps = 11/231 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   + E ++RID I+   L +     +T     +  A+ Y++  GGK++R  L+ E   
Sbjct: 21  LDKAIAERAERIDGIVAGYLPKVEGFPRT-----VCEAMAYSVEAGGKRLRPMLMEETYR 75

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +        AAIE IH YSLIHDDLP++DN   RRG+ T H+ + E  AI+AG+ L
Sbjct: 76  MLGGSTDVVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRQTSHVVFGEAMAILAGDAL 135

Query: 124 LTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179
           L YA+E  +     L ++ R  S+ +  L    G+ GMLGGQ++D++     +   Q+  
Sbjct: 136 LNYAYE-TACKAFDLDEDARKVSEALRILARKPGVYGMLGGQVVDVEMTGRTLTREQLEY 194

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           + + KTGAL+  +   GA++A A   + E +     ++G+ FQ+ DD+LD 
Sbjct: 195 VYENKTGALIEASMMIGAVLAGADSEQVEAVEKIASDIGMAFQVQDDILDV 245


>gi|260596789|ref|YP_003209360.1| geranyltranstransferase [Cronobacter turicensis z3032]
 gi|260215966|emb|CBA28595.1| Geranyltranstransferase [Cronobacter turicensis z3032]
          Length = 299

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 120/204 (58%), Gaps = 13/204 (6%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+ Y  LLGGK++R FLV     +F VN        AAIECIH YSL+HDDLP+MD+
Sbjct: 32  LVEAMLYGTLLGGKRLRPFLVYATGEMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDD 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E +AI+AG+ L T AF I+S +P   +    R  ++  L    G+
Sbjct: 92  DDLRRGQPTCHIRFGEASAILAGDALQTLAFSILSDAPMENVALRDRLAMVSELAKASGV 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM GGQ LD++ E   +D   +  I + KTGAL+  A   GA+ A     +K R     
Sbjct: 152 AGMCGGQALDLEAEGQQVDLDALERIHRHKTGALIRAAVRMGALCA----GDKGRDALVY 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDSYAESIGLAFQVQDDILDVVGD 231


>gi|320197141|gb|EFW71758.1| geranyltranstransferase [Escherichia coli WV_060327]
          Length = 299

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 119/204 (58%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  L+  ++Y ALLGGK++R FLV     +F+V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPLVETMQYGALLGGKRLRPFLVYATGHMFDVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPV 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231


>gi|58582922|ref|YP_201938.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|58427516|gb|AAW76553.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
           oryzae pv. oryzae KACC10331]
          Length = 291

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/199 (41%), Positives = 120/199 (60%), Gaps = 9/199 (4%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+R+A+LGG K++R  LV    +LF            A+E IH YSL+HDDLP+MD
Sbjct: 30  RLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIHTYSLVHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVHI +DE TAI+AG+ L T AFE++++        +R   M SL    G 
Sbjct: 90  DDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAA--ASASAELRVGWMQSLATAAGA 147

Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM GGQ LDI    Q + + + Q   +  +KTGAL+  +   GA+   A+  +++RL  
Sbjct: 148 AGMCGGQALDIDATGQLQPLQDLQ--RMHALKTGALIRASVHMGALTGGAATADQQRLDE 205

Query: 213 FGENLGIIFQLADDLLDCE 231
           F + LG+ FQ+ DD+LD E
Sbjct: 206 FADALGLAFQVRDDILDVE 224


>gi|238791414|ref|ZP_04635052.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909]
 gi|238729030|gb|EEQ20546.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909]
          Length = 306

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 9/202 (4%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+RY A+LGGK++R +LV     +F ++        AAIECIH YSLIHDDLP+MD+
Sbjct: 39  LVAAMRYGAVLGGKRLRPYLVYATGQMFGLSLTNLDAPAAAIECIHAYSLIHDDLPAMDD 98

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154
             +RRG+PT H+++ E  AI+AG+ L T AF I++    P    KD  R  ++  L    
Sbjct: 99  DDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEANMPDVANKD--RLSMIAELAKAS 156

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211
           G+ GM GGQ LD++ E   I  T +  I + KTGAL+  A   GA+ A A        L 
Sbjct: 157 GVAGMCGGQALDLEAEARQISLTNLEQIHRYKTGALIRAAVRLGALAAGAPGRRALPLLD 216

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + E +G+ FQ+ DD+LD   D
Sbjct: 217 RYSEAIGLAFQVQDDILDVIGD 238


>gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
 gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
          Length = 292

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 4/200 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q  ++L  ++ Y+L+ GGK+IR  L      + +           A+ECIH YSL+HDDL
Sbjct: 26  QEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDL 85

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN   RRG  T H  Y E  AI+AG+GLLTYAF++++S  T      +   +  +  
Sbjct: 86  PAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTS-NTVASAQQKLDAIKCVAT 144

Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+GGQ  D+  +D+ I   ++ ++   KTGAL   + E G I+  A++  +  L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANKTTRTAL 204

Query: 211 RCFGENLGIIFQLADDLLDC 230
             +   LG++FQ+ DD+LD 
Sbjct: 205 MEYSNCLGLLFQITDDILDV 224


>gi|254805697|ref|YP_003083918.1| geranyltranstransferase [Neisseria meningitidis alpha14]
 gi|254669239|emb|CBA08097.1| geranyltranstransferase [Neisseria meningitidis alpha14]
 gi|325145254|gb|EGC67533.1| geranyltranstransferase [Neisseria meningitidis M01-240013]
          Length = 298

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 116/196 (59%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L  V      +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGGVVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H+QYDE TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHVQYDEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157

Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +      Q  + Q   +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
           SS3/4]
          Length = 297

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 12/243 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M      +  +  K  +T++   L +   H +T     +  A+ Y++  GGK++R  L+ 
Sbjct: 1   MADNFKERFSQAVKETETVVYSYLPEETGHQKT-----IFEAMNYSVKAGGKRLRPLLMR 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   LF  N        AA+E IH  SLIHDDLP MDN   RRGK T    Y    A++A
Sbjct: 56  EVYRLFGGNGPEIKPFMAAMEMIHTSSLIHDDLPCMDNDEYRRGKLTTWKAYGYDMAVLA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           G+ L+ YAFE  S   +   D  ++   +  L    G+ GM+GGQ +D++   + +   +
Sbjct: 116 GDALMIYAFETASKAFSMGADPAKAGRAIGILAEKTGIYGMIGGQTVDVELTGKAVPREK 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EED 233
           +  I ++KTGAL+  +   GA++A A+  E + +      +G+ FQ+ DD+LD    +E+
Sbjct: 176 LDFIYRLKTGALLEASMMIGAVLAGATVEEIKEVETMASEVGLAFQIQDDILDVTSTQEE 235

Query: 234 LPK 236
           L K
Sbjct: 236 LGK 238


>gi|121610223|ref|YP_998030.1| polyprenyl synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121554863|gb|ABM59012.1| farnesyl-diphosphate synthase [Verminephrobacter eiseniae EF01-2]
          Length = 314

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 19/207 (9%)

Query: 42  AIRYALL-GGKKIRSFLV------------TECASLFNVNHLTALRVGAAIECIHCYSLI 88
           A+RYA+L GGK++R  LV              CA     +   ALR   A+E IH YSL+
Sbjct: 46  AMRYAVLDGGKRLRPLLVLAAYQAVCSGQPAPCA----WHDAAALRAACAVELIHAYSLV 101

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +RRGKPT H+++    A++AG+ L  +AFE+++     +    ++ L  
Sbjct: 102 HDDLPCMDNDVLRRGKPTAHVRFGPARALLAGDALQAFAFELLTPEDMPIPAATQAALCR 161

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L    G  GM GGQ +D+      + E Q+  + ++KTGAL+  +   GA+   A+   
Sbjct: 162 LLARAAGSTGMAGGQAIDLASVGLRLTEGQLRQMHRLKTGALLQASVLMGAVCGQAAPAA 221

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
              L  +G  LG+ FQ+ DD+LD   D
Sbjct: 222 YRALSDYGAALGLAFQVVDDILDVVAD 248


>gi|255321733|ref|ZP_05362888.1| geranyltranstransferase [Campylobacter showae RM3277]
 gi|255301213|gb|EET80475.1| geranyltranstransferase [Campylobacter showae RM3277]
          Length = 388

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 6/195 (3%)

Query: 42  AIRYAL-LGGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           A+ Y L  GGK  R+ LV    A++       A  V  A E +H YSLIHDDLP+MD+  
Sbjct: 134 ALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAAFHVALAFETMHSYSLIHDDLPAMDDSD 193

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+P++H+++DEVTAI+AG+ L T+AF  I+  K  L  ++R + +  L+ N G+ GM
Sbjct: 194 LRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA--KAPLDADVRIKCVEILSRNAGIYGM 251

Query: 160 LGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
             GQ +D   +++ +   ++  +   KT  L+  + ++G ++A   + E  R+   G +L
Sbjct: 252 ALGQAVDCYFENQKLGLEELKFLHIHKTARLIAASLQAGCVVAGLDEAEAARIYDIGLDL 311

Query: 218 GIIFQLADDLLDCEE 232
           G+ FQ+ADD++D  +
Sbjct: 312 GLAFQIADDIIDATQ 326


>gi|308388479|gb|ADO30799.1| geranyltranstransferase [Neisseria meningitidis alpha710]
 gi|325130987|gb|EGC53714.1| geranyltranstransferase [Neisseria meningitidis OX99.30304]
 gi|325137086|gb|EGC59682.1| geranyltranstransferase [Neisseria meningitidis M0579]
 gi|325202912|gb|ADY98366.1| geranyltranstransferase [Neisseria meningitidis M01-240149]
 gi|325207289|gb|ADZ02741.1| geranyltranstransferase [Neisseria meningitidis NZ-05/33]
          Length = 298

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAVLDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHIKYGEATALLVGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +  +  +  +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
 gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
          Length = 289

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 114/196 (58%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L+ AI Y++  GGK++R  +  E    F V    A   V AA+E IH  SLIHDDLP+MD
Sbjct: 25  LIEAILYSVDGGGKRVRPLIFLELLEGFGVALTDAHYDVAAALEMIHTGSLIHDDLPAMD 84

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG+ T H +++E TAI+AG+ L    ++++++   +L   ++  L+  L H  G 
Sbjct: 85  NDDYRRGRLTNHKKFNEATAILAGDSLFLDPYDLVAN--AELSAEVKVALIAELAHASGT 142

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQMLD++ E   +  +++ +I   KTG L+ F   +  I+A  +  +   LR  G
Sbjct: 143 YGMVGGQMLDMEGEERKLSLSELQLIHANKTGKLLTFPVVAAGIVAGLAGEDINNLRKAG 202

Query: 215 ENLGIIFQLADDLLDC 230
             +G+ FQ+ DD+LD 
Sbjct: 203 SLIGLAFQVRDDILDV 218


>gi|208434832|ref|YP_002266498.1| geranyltrans transferase [Helicobacter pylori G27]
 gi|208432761|gb|ACI27632.1| geranyltrans transferase [Helicobacter pylori G27]
          Length = 303

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 124/214 (57%), Gaps = 13/214 (6%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLQKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G ++A 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202

Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
             +NE+  + L+ FG   G+ FQ+ DD++D  +D
Sbjct: 203 GIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236


>gi|315652073|ref|ZP_07905074.1| geranyltranstransferase [Eubacterium saburreum DSM 3986]
 gi|315485720|gb|EFU76101.1| geranyltranstransferase [Eubacterium saburreum DSM 3986]
          Length = 297

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 10/220 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG---AAI 79
           L+++  + + + N  ++ A   A+  GGK++R  ++ E     + +  +   +    AAI
Sbjct: 13  LIESFFYNEDELNKNVIKASNEAIRNGGKRLRPLIMFETYKAISGDEYSEEIIAPFLAAI 72

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH +SLIHDDLP+MDN  +RRGKPT  + Y E  AI+AG+ L   AFEIIS    +  
Sbjct: 73  EMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLSVQAFEIISKKMQETD 132

Query: 140 D-NI---RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFAC 193
           D NI    S+ M +L    G  GM+GGQ +D++      T+  M     +KTGAL+  + 
Sbjct: 133 DFNILKRMSRAMYTLARATGAFGMIGGQCVDVEYSGKKMTEEVMKYTYALKTGALLAASF 192

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             G I+A AS+ E   L+  G  +G  FQ+ DD LD   D
Sbjct: 193 VVGGILAGASETEVRLLKKAGSYVGEAFQIRDDYLDIVAD 232


>gi|260588126|ref|ZP_05854039.1| geranyltranstransferase [Blautia hansenii DSM 20583]
 gi|331082306|ref|ZP_08331432.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541653|gb|EEX22222.1| geranyltranstransferase [Blautia hansenii DSM 20583]
 gi|330400792|gb|EGG80393.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 296

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 14/233 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
             ++LQE +   + +++  L +     +   + R+  A+ Y++  GGK++R   + E   
Sbjct: 3   FKTELQERTDFAEAVIEKYLPE-----EHGFSGRMAEAVNYSMRAGGKRLRPVFMREAYQ 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +            AA+E +H +SLIHDDLP++DN   RRGK T HI + E  AI+AG+ L
Sbjct: 58  ILGGEGEIIEPFMAALEMVHTHSLIHDDLPALDNDEFRRGKQTTHIVFGEAAAILAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           L YA+E   S     KD    Q +      L    G++GMLGGQ +D++++   +++  +
Sbjct: 118 LNYAYETAFSAFDMAKDEAELQRVAKALKVLAQKTGIKGMLGGQGVDVENDGKPLEKQLL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             I + KT AL+  A   G I+A A+  EK  L   G  +GI FQ+ DD+LD 
Sbjct: 178 DYIYENKTSALIEAALMVGGILAGATDIEK--LEQIGSKIGIAFQIQDDILDV 228


>gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
 gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
          Length = 293

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 108/200 (54%), Gaps = 6/200 (3%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  KLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH++YDE TA++ G+ L + AF  +S     L    ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHVKYDEATALLVGDALQSQAF--VSLTSDVLAPAQQAALVRELALASGS 148

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCF 213
            GM GGQ +D+      +   Q+  + +MKTGAL+  A   GA+   A   N    L  +
Sbjct: 149 VGMCGGQAIDLASVGHTLTRAQLETMHRMKTGALLRAAVRMGALAGEAPDANAMRSLDAY 208

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 209 SAAVGLAFQVVDDILDVTTD 228


>gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor)
           [Blastopirellula marina DSM 3645]
 gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor)
           [Blastopirellula marina DSM 3645]
          Length = 298

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 119/222 (53%), Gaps = 7/222 (3%)

Query: 17  DTILD--DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
           DT+ D  D  L   S       DRL  AIRY+LL  GK++R  L    A     +   A+
Sbjct: 14  DTLRDEVDQALNVYSSFGEGCPDRLQEAIRYSLLAPGKRLRPLLTLMAAETCGSDRTQAM 73

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSLIHDDLP+MD+  +RRG+PT H  +DE TAI+AG+ LL  A EI++ 
Sbjct: 74  PSACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHKAFDEATAILAGDALLARALEIVAD 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
                    RS     L    G   ++GGQ  D+ ++F   D   +  I + KTGA++C 
Sbjct: 134 GYQDPLVAARS--CRELAKAAGATALVGGQADDLNEQFGSGDVEMLKAIHRRKTGAMICV 191

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   GAI A A   +  +L  +GE +G+ FQ+ DDLLD   D
Sbjct: 192 SLRLGAIAAGADDQQVAQLNLYGEQIGLAFQIVDDLLDYAGD 233


>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
 gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
          Length = 297

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 126/231 (54%), Gaps = 15/231 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E    +D  L+  L +     Q+ H      A+RY++  GGK++R  L+         
Sbjct: 7   LKEKIALVDAALEQYLPKEEERPQSLHK-----AMRYSIFAGGKRVRPVLMLAACEAVGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+    A+E IH YSLIHDDLP+MD+   RRG+PT H  + E  AI+AG+GLLT A
Sbjct: 62  QIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLTEA 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDEF---IDETQVFMI 180
           F+++S P+      I     L + H I    G  GM+GGQ++D++ E    +D   V  I
Sbjct: 122 FKLMSDPR--FAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTVQYI 179

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              KTGAL+  +  +GA++  A   +   +R +GE  G+ FQ+ADD+LD E
Sbjct: 180 HAHKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIE 230


>gi|314933695|ref|ZP_07841060.1| geranyltranstransferase [Staphylococcus caprae C87]
 gi|313653845|gb|EFS17602.1| geranyltranstransferase [Staphylococcus caprae C87]
          Length = 288

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 125/210 (59%), Gaps = 6/210 (2%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           SH+ T   + ++ +++    GGK+IR  L+    ++ N ++   L+   A+E IH YSLI
Sbjct: 19  SHLNTDLEESMMYSLQ---AGGKRIRPVLLLLTLNMLNEDYHKGLQSALALEMIHTYSLI 75

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MD+   RRGK T H  Y E  AI+AG+ LLT AFE++S+    ++DN++ +++ 
Sbjct: 76  HDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDDL-IEDNVKVKVLQ 134

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L+   G  GM+GGQ LD+Q E   +D   +  I K KTGAL+ FA  +   +A   Q  
Sbjct: 135 RLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAVMAAVDIAQVDQKT 194

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              L  F E+LG++FQ+ DDLLD   D  K
Sbjct: 195 SHNLNEFSEHLGLMFQIKDDLLDVYGDEKK 224


>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 299

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 135/246 (54%), Gaps = 23/246 (9%)

Query: 5   LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +  KL+E    + K+++  L+ +L + +  +  Q       A+RY++  GGK++R  L  
Sbjct: 2   ISRKLEEYIYLSQKKVEENLEKILKERSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54

Query: 60  ECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               + + + +     L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  A
Sbjct: 55  LSYQMVSKDQIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114

Query: 117 IIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
           I+AG+ LL  A E+      +    K+ +++   L      G++GM+GGQ++DI +   D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCDKNLVKAAKYLFWAS--GVEGMIGGQVIDITNSGQD 172

Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              E  +F +   KT  L+  +C  GA++A A  +    L  +G+NLG+ FQ+ DD+LD 
Sbjct: 173 IKSEELLFEMHLKKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDV 232

Query: 231 EEDLPK 236
             D  K
Sbjct: 233 IGDSKK 238


>gi|311087355|gb|ADP67435.1| geranyltranstransferase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 282

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 120/207 (57%), Gaps = 13/207 (6%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL A++Y++  G K++RS L+     +F VN  T   +  AIE IH YSLIHDDLP MDN
Sbjct: 32  LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156
              RRGK + H++Y E T+++AG+ L + AF I+S+       N++   M+S L+++IG 
Sbjct: 92  DNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGS 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM  GQ LD++ E   ++ +++ +I   KT  LM     S   + + S N   +     
Sbjct: 152 SGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM----RSAVRLVYFSSNNFSKSILSI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           L  F  ++G+ FQ+ DD+LD ++D  K
Sbjct: 208 LDLFSISIGLAFQIQDDILDFKKDSVK 234


>gi|219682370|ref|YP_002468754.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622103|gb|ACL30259.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086767|gb|ADP66848.1| geranyltranstransferase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 282

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 13/204 (6%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL A++Y++  G K++RS L+     +F VN  T   +  AIE IH YSLIHDDLP MDN
Sbjct: 32  LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156
              RRGK + H++Y E T+++AG+ L + AF I+S+       N++   M+S L+++IG 
Sbjct: 92  DNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGS 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM  GQ LD++ E   ++ +++ +I   KT  LM     S   + + S N   +     
Sbjct: 152 SGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM----RSAVRLVYFSSNNFSKSILSI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  F  ++G+ FQ+ DD+LD ++D
Sbjct: 208 LDLFSISIGLAFQIQDDILDFKKD 231


>gi|315931387|gb|EFV10356.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 327]
          Length = 281

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 36  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 96  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNTGLNGMVIGQAIDC 153

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213

Query: 226 DLLDC 230
           D++D 
Sbjct: 214 DIIDV 218


>gi|317177716|dbj|BAJ55505.1| geranyltranstransferase [Helicobacter pylori F16]
          Length = 303

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 123/213 (57%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ+LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMVLGQVLDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|217033116|ref|ZP_03438579.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128]
 gi|298736116|ref|YP_003728641.1| geranyltranstransferase IspA [Helicobacter pylori B8]
 gi|216945159|gb|EEC23852.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128]
 gi|298355305|emb|CBI66177.1| geranyltranstransferase (IspA) [Helicobacter pylori B8]
          Length = 303

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 124/214 (57%), Gaps = 13/214 (6%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G ++A 
Sbjct: 144 VELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202

Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
             +NE+  + L+ FG   G+ FQ+ DD++D  +D
Sbjct: 203 GIKNEELLKWLQAFGLKTGLCFQVLDDIIDVTQD 236


>gi|256957073|ref|ZP_05561244.1| polyprenyl synthetase [Enterococcus faecalis DS5]
 gi|256947569|gb|EEU64201.1| polyprenyl synthetase [Enterococcus faecalis DS5]
 gi|315034211|gb|EFT46143.1| geranyltranstransferase [Enterococcus faecalis TX0027]
          Length = 293

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKT 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G I+A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGILANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|15617063|ref|NP_240276.1| geranyltranstransferase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681815|ref|YP_002468201.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471517|ref|ZP_05635516.1| geranyltranstransferase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11386920|sp|P57537|ISPA_BUCAI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|25403631|pir||B84984 geranyltranstransferase (EC 2.5.1.10) [imported] - Buchnera sp.
           (strain APS)
 gi|10039128|dbj|BAB13162.1| geranyltranstransferase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624658|gb|ACL30813.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 282

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 13/204 (6%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL A++Y++  G K++RS L+     +F VN  T   +  AIE IH YSLIHDDLP MDN
Sbjct: 32  LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156
              RRGK + H++Y E T+++AG+ L + AF I+S+       N++   M+S L+++IG 
Sbjct: 92  DNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGS 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM  GQ LD++ E   ++ +++ +I   KT  LM     S   + + S N   +     
Sbjct: 152 SGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM----RSAVRLVYFSSNNFSKSILSI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  F  ++G+ FQ+ DD+LD ++D
Sbjct: 208 LDLFSISIGLAFQIQDDILDFKKD 231


>gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
 gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
          Length = 292

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 111/195 (56%), Gaps = 4/195 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++ Y+L+ GGK+IR  L      + + +         A+ECIH YSL+HDDLP+MDN
Sbjct: 31  LYESMNYSLMQGGKRIRPILSKAVLEMLHKDPADYKEFLCAMECIHTYSLVHDDLPAMDN 90

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG  T H  Y E  AI+AG+GLLTYAF+++++ +T         +    T   G +
Sbjct: 91  DDYRRGNLTNHKVYGEGMAILAGDGLLTYAFQLMTANETATAQEKLDAIQCVAT-AAGPE 149

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ  D+  +D+ I   ++ ++ + KTGAL   + E G I+ +A    +  L  +  
Sbjct: 150 GMVGGQAFDMLSEDKHIPLEELKVLHRGKTGALFNASVELGLILGNADTATRTALMEYAN 209

Query: 216 NLGIIFQLADDLLDC 230
            LG++FQ+ DD+LD 
Sbjct: 210 CLGLLFQITDDILDV 224


>gi|315586874|gb|ADU41255.1| geranyltranstransferase [Helicobacter pylori 35A]
          Length = 303

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 129/229 (56%), Gaps = 15/229 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNV 67
           KR ++ L+   L    H+++ H     +     L GGK+ R   FL   CA +    ++ 
Sbjct: 14  KRFESFLNHHHL----HLESFHPYLKKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
           FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT
Sbjct: 130 FELLSN--SLLESHIIVELIKILSTNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
             L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|325276613|ref|ZP_08142352.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
 gi|324098253|gb|EGB96360.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
          Length = 295

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 128/225 (56%), Gaps = 10/225 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R+D  L+ L +       T+  +RL +A+RY+++ GGK++R  L              A
Sbjct: 11  RRVDAALEPLFVAP-----TKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQA 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  + 
Sbjct: 66  NGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALL 125

Query: 133 SPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
            P  +   D++R  ++ +L    G  GM+GGQ +D+      +D+  +  + + KTGAL+
Sbjct: 126 DPHLSPQADSVRLAMVQALATAAGPAGMVGGQAIDLGSVGLKLDQRALAFMHRHKTGALI 185

Query: 190 CFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   GA+  A A Q + + L+ + + +G+ FQ+ DD+LD E D
Sbjct: 186 EASVRLGALASARAGQQQLDALQTYAQAIGLAFQVQDDILDVEGD 230


>gi|254779530|ref|YP_003057636.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Helicobacter pylori B38]
 gi|254001442|emb|CAX29437.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Helicobacter pylori B38]
          Length = 303

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISTSLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|167627431|ref|YP_001677931.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597432|gb|ABZ87430.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 293

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 15/201 (7%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A++Y+   GGK+IR+  V      FN++     ++  AIECIH YSLIHDDLP+MD
Sbjct: 27  KLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIECIHTYSLIHDDLPAMD 86

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155
           N  +RRGKPT HI+++E TAI+AG+ L +  FEII++    + D  +  ++ +      G
Sbjct: 87  NDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINT--LDINDIYKLKKVNIVFAKCCG 144

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEKER 209
           L+GM+GGQ LDI      E Q   +Q +      KT  +   +     I++  + +E E 
Sbjct: 145 LEGMVGGQQLDID----GENQNLKLQDLEILHINKTAKMFRASIVLPYIVSKYNNDEFET 200

Query: 210 -LRCFGENLGIIFQLADDLLD 229
            L    + +G+ FQ+ DD+LD
Sbjct: 201 ILTKVSDLIGLCFQIKDDILD 221


>gi|188527752|ref|YP_001910439.1| geranyltranstransferase [Helicobacter pylori Shi470]
 gi|188143992|gb|ACD48409.1| geranyltranstransferase [Helicobacter pylori Shi470]
 gi|308063758|gb|ADO05645.1| geranyltranstransferase [Helicobacter pylori Sat464]
          Length = 303

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSSQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGFVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|160915116|ref|ZP_02077329.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
 gi|158432915|gb|EDP11204.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
          Length = 280

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 118/209 (56%), Gaps = 19/209 (9%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + ++  A+ Y+LL GGK+IR  L+      + +         AAIE IH YSLIHDDLP+
Sbjct: 17  DSKVKEAMLYSLLAGGKRIRPQLLFSALKAYGIAEEKGFPCAAAIEMIHTYSLIHDDLPA 76

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PT HIQ+DE TAI+AG+ LLT AF  +      LK +  +  ++SL   I
Sbjct: 77  MDDDTLRRGRPTCHIQFDEATAILAGDALLTQAFHEV------LKSDATASQLVSLESLI 130

Query: 155 ----GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEK 207
               G  GM+ GQ+ D++ E   +  +  +Q++   KTG L+       A++A+  + + 
Sbjct: 131 SSYSGANGMVLGQIYDLEAEGRCDVSIEALQRVHEYKTGKLITLPLLCAAVLAN-HEEDF 189

Query: 208 ERLRCFGENLGIIFQLADDLLD----CEE 232
           E  +  G  +G+ FQ+ DD+ D    CEE
Sbjct: 190 EVWKSIGYAMGLSFQIQDDVFDVTSTCEE 218


>gi|331701507|ref|YP_004398466.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929]
 gi|329128850|gb|AEB73403.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929]
          Length = 297

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 7/186 (3%)

Query: 49  GGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L     ASL +    T L+   A+E +H YSLIHDDLP+MDN  +RRGKPT 
Sbjct: 44  GGKRLRPLLTLAVLASLGDPIDQTVLKTSCALELMHSYSLIHDDLPAMDNDDLRRGKPTN 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H+++    A +AG+GL   AF+ +      L    +++L L+L    G  GM+ GQ  DI
Sbjct: 104 HVKFGAGMATLAGDGLQPLAFQWLVD--NDLDSQTQAELTLALAKAAGPHGMVSGQADDI 161

Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           + E      +  +QK+   KTGAL+ +A E+G IM      +++ L  F E  G  +Q+ 
Sbjct: 162 EFEGT-RLSLSGLQKLDRNKTGALIRYAVEAGLIMGRVIPEKRKSLLTFAEKFGEAYQIY 220

Query: 225 DDLLDC 230
           DD+LD 
Sbjct: 221 DDILDV 226


>gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319]
 gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319]
          Length = 298

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 131/222 (59%), Gaps = 12/222 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           R++T L +++   A H      + +L ++     GGK++R  L+      F  +    L 
Sbjct: 17  RVETRLPEVV--KALHAPVNLKESMLYSLTA---GGKRLRPVLLFATLHAFGKDESMGLE 71

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-S 133
              A+E IH YSLIHDDLPSMD+  +RRGKPT H  Y E TAI+AG+ LLT +F++IS +
Sbjct: 72  TACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEA 131

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALM 189
              ++  +++ QL+  L    G +GM+ GQ+ D++ E     +DE +   +   KTG L+
Sbjct: 132 AHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLH--KTGKLL 189

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            F  ++GAI+A A+  ++E L  F +++G+ FQ+ DD+LD E
Sbjct: 190 GFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVE 231


>gi|57168796|ref|ZP_00367927.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228]
 gi|305432462|ref|ZP_07401624.1| geranyltranstransferase [Campylobacter coli JV20]
 gi|57019843|gb|EAL56526.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228]
 gi|304444501|gb|EFM37152.1| geranyltranstransferase [Campylobacter coli JV20]
          Length = 279

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 7/185 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK  R+ L+          HL   AL    A+E IH YSLIHDDLP+MDN  +RRG PT
Sbjct: 34  GGKHFRAQLLLGVVQ-NKAPHLIPNALNAALALEFIHTYSLIHDDLPAMDNADLRRGTPT 92

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S+    LK++I+  L+ +L  N G+ GM+ GQ +D
Sbjct: 93  LHKSYDETTAILVGDALNTEAFLLLSN--LNLKESIKINLIRTLAFNAGINGMILGQAID 150

Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ ++  ++  +   KT  L+  A + G  +    + E E++   G  LG+IFQ+ 
Sbjct: 151 CYFEDKKLNLEELEFLHTHKTAKLIAAALKMGCEICELDEKESEKIYQIGLKLGLIFQIN 210

Query: 225 DDLLD 229
           DD++D
Sbjct: 211 DDIID 215


>gi|149928102|ref|ZP_01916349.1| geranyltranstransferase [Limnobacter sp. MED105]
 gi|149823188|gb|EDM82425.1| geranyltranstransferase [Limnobacter sp. MED105]
          Length = 300

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 9/202 (4%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDL 92
           +  L +A+ YALL GGK++R+ LV   A+ + V   T+    AA  IE +H YSL+HDDL
Sbjct: 34  SSELNAAMEYALLDGGKRLRAMLV--FAAGYAVETPTSQLNDAACSIEAMHAYSLVHDDL 91

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           PSMDN  +RRGKPT H+++ E  A++AG+ L T AF+ ++    Q    +R Q + +L  
Sbjct: 92  PSMDNDVLRRGKPTCHVKFGEAFALLAGDALQTAAFQWLAE-SNQGSVQVRMQQIAALAS 150

Query: 153 NIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKER 209
             GLQGM  GQ +D+    + +D   +  +   KTG L+  +   G +  A  S  EK  
Sbjct: 151 AAGLQGMAAGQAIDLAHVGKPMDLQSLATMHARKTGDLITASVRMGYVSNATLSAVEKNG 210

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
           L  +   LG+ +Q+ DD+LD E
Sbjct: 211 LEAYAHCLGLAYQVIDDILDVE 232


>gi|330962412|gb|EGH62672.1| CrtE [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 304

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY---ALLGGKKIRSFL 57
           ++ GL   L    +RI+  L+DLL           N+R L AI      L  GK++R  L
Sbjct: 12  LDSGLTEHLASVRERIEKRLNDLL-------PAGGNERDLVAIAMREGTLAPGKRVRPML 64

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           +   A     +   AL +G A+E IH  SL+ DD+P MD+  +RRG PTVH+++ +  AI
Sbjct: 65  LMLAADGLGHDSSAALELGCAVEMIHAASLVLDDMPCMDDARLRRGLPTVHLKFGQDVAI 124

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           +A   LL+ AF +++   +++   +R+QL+  L + +G+QG++ GQ  D+ D     D  
Sbjct: 125 LAAVALLSRAFGVVAG-ISEVPPAVRTQLVGVLANAVGMQGLVRGQFQDLHDGLHSRDAE 183

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q+    ++KTG L     +  ++++ A +  +  L+ F   LG  FQL DDL D   D  
Sbjct: 184 QIATTNRLKTGVLFSAIMDMASLVSGADEGTRAGLQDFATELGQAFQLYDDLQDKSADNA 243

Query: 236 K 236
           K
Sbjct: 244 K 244


>gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27]
 gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27]
          Length = 292

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 4/200 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q  ++L  ++ Y+L+ GGK+IR  L      + +           A+ECIH YSL+HDDL
Sbjct: 26  QEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDL 85

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN   RRG  T H  Y E  AI+AG+GLLTYAF++++S  T      +   +  +  
Sbjct: 86  PAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTS-NTVASAQQKLDAIKCVAT 144

Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+GGQ  D+  +D+ I   ++ ++   KTGAL   + E G I+  A+   +  L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANNTTRTAL 204

Query: 211 RCFGENLGIIFQLADDLLDC 230
             +   LG++FQ+ DD+LD 
Sbjct: 205 MEYSNCLGLLFQITDDILDV 224


>gi|283953738|ref|ZP_06371269.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794779|gb|EFC33517.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414]
          Length = 279

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 13/188 (6%)

Query: 49  GGKKIRSFLVTECA-----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK  R+ L+          L N     AL    A+E IH YSLIHDDLPSMDN   RRG
Sbjct: 34  GGKHFRAQLLLSVVQSNKPELIN----QALDAALALEFIHTYSLIHDDLPSMDNADFRRG 89

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            PT+H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ
Sbjct: 90  IPTLHKSYDETTAILVGDALNTEAFLVLSH--ANLKDEIKIKLIKTLAFNAGLNGMVIGQ 147

Query: 164 MLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +D   +D+ +   ++  +   KT  L+  A + G  +   S  E  ++   G  LG+IF
Sbjct: 148 AIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICQLSNEESNQIYKLGLKLGLIF 207

Query: 222 QLADDLLD 229
           Q+ DD++D
Sbjct: 208 QINDDIID 215


>gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160]
 gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160]
          Length = 293

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 11/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++T L+  L       +T     L  A+RYA+LGG K++R  L      L        
Sbjct: 12  ERVETALEHYL-----PAETTEPAGLHGAMRYAVLGGGKRVRPLLCHAAGELTGARAECL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF +++
Sbjct: 67  DAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAFVVLT 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
           S    +    ++ L+  L    G  GM GGQ +D+      +   Q+  + +MKTGAL+ 
Sbjct: 127 SDVLGVPQ--QASLVRELALASGSIGMCGGQAIDLASVGHTLTRPQLETMHRMKTGALLR 184

Query: 191 FACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
            A   GA+   A   +    L  +   +G+ FQ+ DD+LD   D
Sbjct: 185 AAVRMGALAGEAPDAKALASLDAYAAAVGLAFQVVDDILDVTTD 228


>gi|157415864|ref|YP_001483120.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386828|gb|ABV53143.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748501|gb|ADN91771.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni M1]
          Length = 281

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 36  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 96  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213

Query: 226 DLLDC 230
           D++D 
Sbjct: 214 DIIDV 218


>gi|57238655|ref|YP_179786.1| geranyltranstransferase [Campylobacter jejuni RM1221]
 gi|57167459|gb|AAW36238.1| geranyltranstransferase [Campylobacter jejuni RM1221]
 gi|315059094|gb|ADT73423.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 281

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 36  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 96  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213

Query: 226 DLLDC 230
           D++D 
Sbjct: 214 DIIDV 218


>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 372

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 16/198 (8%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L  GK++R  L      L       A+    A+E IH  SLI DDLP MDN  +
Sbjct: 111 AMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDL 170

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML----SLTHNIGL 156
           RRGKPT H  Y E  AI++G  LL+ AFE +++ +      I S+ M+     L  +IG 
Sbjct: 171 RRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAE------ISSERMVWAVRELARSIGT 224

Query: 157 QGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +G++ GQ +DI  E +D  +V +     I   KT  L+  A   GAI+   S  E E +R
Sbjct: 225 RGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVR 284

Query: 212 CFGENLGIIFQLADDLLD 229
            F   +G++FQ+ DD+LD
Sbjct: 285 KFARCIGLLFQVVDDILD 302


>gi|153952306|ref|YP_001398921.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939752|gb|ABS44493.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 281

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 36  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 96  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213

Query: 226 DLLDC 230
           D++D 
Sbjct: 214 DIIDV 218


>gi|311086191|gb|ADP66273.1| geranyltranstransferase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311087854|gb|ADP67933.1| geranyltranstransferase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 301

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 120/207 (57%), Gaps = 13/207 (6%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL A++Y++  G K++RS L+     +F VN  T   +  AIE IH YSLIHDDLP MDN
Sbjct: 32  LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156
              RRGK + H++Y E T+++AG+ L + AF I+S+       N++   M+S L+++IG 
Sbjct: 92  DNFRRGKISCHVKYGESTSLLAGDALQSLAFNILSNSFMPNVSNLKRIKMISELSYSIGS 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM  GQ LD++ E   ++ +++ +I   KT  LM     S   + + S N   +     
Sbjct: 152 SGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM----RSAVRLVYFSSNNFSKSILSI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           L  F  ++G+ FQ+ DD+LD ++D  K
Sbjct: 208 LDLFSISIGLAFQIQDDILDFKKDSVK 234


>gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551]
 gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551]
          Length = 298

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 131/222 (59%), Gaps = 12/222 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           R++T L +++   A H      + +L ++     GGK++R  L+      F  +    L 
Sbjct: 17  RVETRLPEVV--KALHAPVNLKESMLYSLTA---GGKRLRPVLLFATLHAFGKDESMGLE 71

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-S 133
              A+E IH YSLIHDDLPSMD+  +RRGKPT H  Y E TAI+AG+ LLT +F++IS +
Sbjct: 72  TACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQLISEA 131

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALM 189
              ++  +++ QL+  L    G +GM+ GQ+ D++ E     +DE +   +   KTG L+
Sbjct: 132 AHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLH--KTGKLL 189

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            F  ++GAI+A A+  ++E L  F +++G+ FQ+ DD+LD E
Sbjct: 190 GFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVE 231


>gi|260438375|ref|ZP_05792191.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876]
 gi|292808961|gb|EFF68166.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876]
          Length = 297

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 5/219 (2%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           RI T   D +++     +   N  L  A+ Y++  GGK++R  L+     LF  +     
Sbjct: 8   RIRTDYADNVVKEFLSKEEGFNKELCEAMNYSVNAGGKRLRPILLHTFYKLFGGDSDIVK 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IIS 132
              AA E +H YSL+HDDLP++DN   RRG PT H ++ E TAI+AG+GLL  A+E  I 
Sbjct: 68  PCMAAYEMLHTYSLVHDDLPAIDNDNYRRGMPTTHARFGEATAILAGDGLLHQAYETFIK 127

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMC 190
              T++       L +      G+ GMLGGQ  D+    E I +  ++ I + KTGAL+ 
Sbjct: 128 IFDTEISTRTVKALKI-FGDKTGINGMLGGQSADVLHTGEIISDELLYYIYEKKTGALIE 186

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A  +G+++A  +  +  +++  GE +G+ FQ+ DD+LD
Sbjct: 187 GAMLTGSVLAGCNDEDLAKIKRVGELVGLAFQIKDDILD 225


>gi|241668001|ref|ZP_04755579.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876535|ref|ZP_05249245.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842556|gb|EET20970.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 293

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 15/201 (7%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A++Y+   GGK+IR+  V      FN++     ++  AIECIH YSLIHDDLP+MD
Sbjct: 27  KLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIECIHTYSLIHDDLPAMD 86

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155
           N  +RRGKPT HI+++E TAI+AG+ L +  FEII++    + D  +  ++ +      G
Sbjct: 87  NDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINT--LDINDIYKLKKVNIVFAKCCG 144

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEKER 209
           L+GM+GGQ LDI      E Q   +Q +      KT  +   +     I++  + +E E 
Sbjct: 145 LEGMVGGQQLDID----GENQNLKLQDLEILHINKTAKMFRASIVLPYIVSKYNNDEFEA 200

Query: 210 -LRCFGENLGIIFQLADDLLD 229
            L    + +G+ FQ+ DD+LD
Sbjct: 201 ILTKVSDLIGLCFQIKDDILD 221


>gi|86149392|ref|ZP_01067623.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86153173|ref|ZP_01071378.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|88596676|ref|ZP_01099913.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|148925783|ref|ZP_01809471.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|218563233|ref|YP_002345013.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|85840174|gb|EAQ57432.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85844058|gb|EAQ61268.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|88191517|gb|EAQ95489.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360940|emb|CAL35741.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|145845793|gb|EDK22884.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|284926838|gb|ADC29190.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315927606|gb|EFV06937.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929482|gb|EFV08678.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni 305]
          Length = 281

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 36  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 96  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213

Query: 226 DLLDC 230
           D++D 
Sbjct: 214 DIIDV 218


>gi|315162955|gb|EFU06972.1| geranyltranstransferase [Enterococcus faecalis TX0645]
          Length = 293

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIYAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 LFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
 gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
          Length = 294

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 108/200 (54%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVRELALASGS 149

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCF 213
            GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+       E    L  +
Sbjct: 150 IGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLRAAVRMGALAGETPSAETLAALDVY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 210 AAAVGLAFQVVDDILDVTTD 229


>gi|239996638|ref|ZP_04717162.1| geranyltranstransferase [Alteromonas macleodii ATCC 27126]
          Length = 296

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 129/227 (56%), Gaps = 14/227 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           Q+    + T++D+L           +  RL  A+R+ALL GGK++R  LV    +  +V 
Sbjct: 12  QQTDASLLTLIDEL---------PDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVP 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +  AIEC+H YSL+HDDLP+MD+  +RRG PT HI +DE TAI+AG+ L   AF
Sbjct: 63  KKDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAF 122

Query: 129 EIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
            +++ +P +   +  RSQL+  L  + G  GM GGQ +D+    + I   ++  + ++KT
Sbjct: 123 TVLADAPLSTYAETKRSQLLSVLAKSAGYIGMCGGQAIDLASTGKTISLEELKQLHRLKT 182

Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCE 231
           GAL+    E  AI++       K  L  +  ++G+ FQ+ DD+LD E
Sbjct: 183 GALLKACVEMVAIVSEGLLPQTKIDLMAYAADIGLAFQVQDDILDVE 229


>gi|121613596|ref|YP_001001287.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167006181|ref|ZP_02271939.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249601|gb|EAQ72560.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 281

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 36  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 96  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 154 FFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213

Query: 226 DLLDC 230
           D++D 
Sbjct: 214 DIIDV 218


>gi|205355656|ref|ZP_03222426.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346433|gb|EDZ33066.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 250

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 5   GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 64

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 65  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 122

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 123 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 182

Query: 226 DLLDC 230
           D++D 
Sbjct: 183 DIIDV 187


>gi|297380126|gb|ADI35013.1| Geranyltranstransferase [Helicobacter pylori v225d]
          Length = 303

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|300859805|ref|ZP_07105893.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11]
 gi|300850623|gb|EFK78372.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11]
 gi|315144365|gb|EFT88381.1| geranyltranstransferase [Enterococcus faecalis TX2141]
          Length = 293

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 LFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|86152300|ref|ZP_01070511.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85840789|gb|EAQ58040.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 281

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 36  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 96  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 154 FFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIND 213

Query: 226 DLLDC 230
           D++D 
Sbjct: 214 DIIDV 218


>gi|167746999|ref|ZP_02419126.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662]
 gi|167653959|gb|EDR98088.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662]
          Length = 297

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 120/235 (51%), Gaps = 27/235 (11%)

Query: 10  QENSKRI---DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           QE  KRI   + ILD  L +     +T     +L A+   +  GGK++R  L+ E   +F
Sbjct: 6   QELKKRISHIEKILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLMEETYKMF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                      AAIE IH YSLIHDDLP++DN   RRG+ T HI Y E  AI+AG+ LL 
Sbjct: 61  GGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLN 120

Query: 126 YAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE 174
           YAFE  SS         PK        ++ +  L    G+ GM+GGQ  D++ E   +  
Sbjct: 121 YAFETASSAFALEDADLPKV-------AEAIRILARKPGIYGMIGGQAADVELEGTVLSM 173

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            Q+  I   KT AL+      GA++A AS  + + +   G  +G+ FQ+ DD+LD
Sbjct: 174 EQIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILD 228


>gi|317009586|gb|ADU80166.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Helicobacter pylori India7]
          Length = 303

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G +++ 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVVSG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG   G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236


>gi|256847381|ref|ZP_05552827.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256716045|gb|EEU31020.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 287

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 7/194 (3%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           S I   + GGK++R  L       F  ++N    LR   A+E +H YSLIHDDLP+MDN 
Sbjct: 29  STIYSLMAGGKRLRPALTLAICDAFQQSINQ-DVLRASCAVELLHTYSLIHDDLPAMDND 87

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG PT H ++    A +AG+GLLT AF+ +S     L    R  L+  L    G  G
Sbjct: 88  DLRRGLPTNHRRFGAGMATLAGDGLLTLAFQWLSD--NNLATTTRLSLVRELATAAGPAG 145

Query: 159 MLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           M+ GQ +DI +E   +    + ++ + KTGAL+ +A  +G I+ + +   K  L  FGE 
Sbjct: 146 MVAGQAMDIHNEGHHLALPDLQLLHEKKTGALIRYAVLAGGIITNQAPETKHLLARFGEY 205

Query: 217 LGIIFQLADDLLDC 230
            G+ FQ+ DDL+D 
Sbjct: 206 YGLAFQIYDDLMDV 219


>gi|39996864|ref|NP_952815.1| geranyltranstransferase [Geobacter sulfurreducens PCA]
 gi|39983752|gb|AAR35142.1| geranyltranstransferase [Geobacter sulfurreducens PCA]
 gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
           KN400]
          Length = 297

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 119/198 (60%), Gaps = 10/198 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY++  GGK++R  L+         +   AL    A+E IH YSLIHDDLP+MD+   
Sbjct: 35  AMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDF 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL---- 156
           RRG+PT H  + E  AI+AG+ LLT AF +ISSP       + S  +L + H I L    
Sbjct: 95  RRGRPTNHKVFGEAIAILAGDALLTEAFILISSP--SYAAAVGSDRLLPVIHEIALCAGS 152

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +GM+GGQ++D++ E    ID   V  I   KTGAL+  + ++GA++  A+ +  + +  +
Sbjct: 153 RGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANADAVKAVTRY 212

Query: 214 GENLGIIFQLADDLLDCE 231
           GE +G+ FQ+ADD+LD E
Sbjct: 213 GEAIGLAFQIADDILDIE 230


>gi|317471815|ref|ZP_07931152.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900706|gb|EFV22683.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 297

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 120/235 (51%), Gaps = 27/235 (11%)

Query: 10  QENSKRI---DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           QE  KRI   + ILD  L +     +T     +L A+   +  GGK++R  L+ E   +F
Sbjct: 6   QELKKRISHIEEILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLMEETYKMF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                      AAIE IH YSLIHDDLP++DN   RRG+ T HI Y E  AI+AG+ LL 
Sbjct: 61  GGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILAGDALLN 120

Query: 126 YAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE 174
           YAFE  SS         PK        ++ +  L    G+ GM+GGQ  D++ E   +  
Sbjct: 121 YAFETASSAFALEDADLPKV-------AEAIRILARKPGIYGMIGGQAADVELEGTVLSM 173

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            Q+  I   KT AL+      GA++A AS  + + +   G  +G+ FQ+ DD+LD
Sbjct: 174 EQIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILD 228


>gi|260577316|ref|ZP_05845289.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
 gi|259020497|gb|EEW23820.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
          Length = 289

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/224 (40%), Positives = 126/224 (56%), Gaps = 16/224 (7%)

Query: 22  DLLLQTASHMQTQ--------HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           D+LL  A+H+Q +         +  ++ A+RYA  GGK++R FLV E A L  +    A+
Sbjct: 5   DVLLTDAAHIQARLDAAMAGLSDQPVVQAMRYATQGGKRLRGFLVLESARLHGIAAENAV 64

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              AAIE +H YSL+HDDLP MD+  +RRG PT H+++DE TA++AG+ L T AFE++  
Sbjct: 65  SAAAAIEALHAYSLVHDDLPCMDDDDLRRGLPTCHVKWDEATAVLAGDALQTMAFELLCD 124

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALM 189
           P     +  R  L+ SL    G  GM+ GQ LDI  E   E     Q+  +Q  KTGAL+
Sbjct: 125 PALG-SEKARLALVASLARASGAAGMVYGQALDIAAETASEPLTLAQITELQAGKTGALI 183

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   S    A  +  +   L  F   LG+ FQ+ADD+LD E D
Sbjct: 184 SW---SAQAGALLAGADPAPLARFATALGLAFQIADDILDVEGD 224


>gi|149915300|ref|ZP_01903828.1| lipoyl synthase [Roseobacter sp. AzwK-3b]
 gi|149811021|gb|EDM70860.1| lipoyl synthase [Roseobacter sp. AzwK-3b]
          Length = 299

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 17/217 (7%)

Query: 26  QTASHMQTQHNDRLLSA---------IRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
           Q A+ +Q  H DR+L+A         +RYA  GGK+IR+ LV + A L ++    AL   
Sbjct: 18  QQAARVQ-DHLDRVLAAFGDGAVAQAMRYACSGGKRIRARLVLDGARLHDIPEARALWPA 76

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE +H YSL+HDDLP MD+  +RRG+PTVHI+++E TA++ G+ L   AFE+ + P  
Sbjct: 77  CAIEAMHAYSLVHDDLPCMDDDDLRRGQPTVHIRWNEATAVLTGDALQALAFELATHPDG 136

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFA 192
                 R+ L LSL    G QGM+ GQ LDI  E  D      ++  +Q  KTGAL+ +A
Sbjct: 137 AATAQARADLALSLARAAGGQGMVLGQALDIAAETADRPLTLDEITHLQAGKTGALIEWA 196

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +G  MA A   +   L  +   LG+ FQ+ DD++D
Sbjct: 197 ACAGPRMALA---DTAPLAAYAAALGLAFQIQDDVID 230


>gi|229546828|ref|ZP_04435553.1| geranyltranstransferase [Enterococcus faecalis TX1322]
 gi|256852634|ref|ZP_05558005.1| geranyltranstransferase [Enterococcus faecalis T8]
 gi|257077869|ref|ZP_05572230.1| polyprenyl synthetase [Enterococcus faecalis JH1]
 gi|294780571|ref|ZP_06745934.1| geranyltranstransferase [Enterococcus faecalis PC1.1]
 gi|307268062|ref|ZP_07549450.1| geranyltranstransferase [Enterococcus faecalis TX4248]
 gi|307289416|ref|ZP_07569370.1| geranyltranstransferase [Enterococcus faecalis TX0109]
 gi|307290056|ref|ZP_07569980.1| geranyltranstransferase [Enterococcus faecalis TX0411]
 gi|229307993|gb|EEN73980.1| geranyltranstransferase [Enterococcus faecalis TX1322]
 gi|256711979|gb|EEU27016.1| geranyltranstransferase [Enterococcus faecalis T8]
 gi|256985899|gb|EEU73201.1| polyprenyl synthetase [Enterococcus faecalis JH1]
 gi|294452398|gb|EFG20837.1| geranyltranstransferase [Enterococcus faecalis PC1.1]
 gi|306498898|gb|EFM68392.1| geranyltranstransferase [Enterococcus faecalis TX0411]
 gi|306499671|gb|EFM69034.1| geranyltranstransferase [Enterococcus faecalis TX0109]
 gi|306515703|gb|EFM84230.1| geranyltranstransferase [Enterococcus faecalis TX4248]
 gi|315029671|gb|EFT41603.1| geranyltranstransferase [Enterococcus faecalis TX4000]
 gi|315031732|gb|EFT43664.1| geranyltranstransferase [Enterococcus faecalis TX0017]
 gi|315147933|gb|EFT91949.1| geranyltranstransferase [Enterococcus faecalis TX4244]
 gi|315165153|gb|EFU09170.1| geranyltranstransferase [Enterococcus faecalis TX1302]
 gi|323480221|gb|ADX79660.1| Farnesyl-diphosphate synthase [Enterococcus faecalis 62]
 gi|327534568|gb|AEA93402.1| geranyltranstransferase [Enterococcus faecalis OG1RF]
          Length = 293

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G I+A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGILANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|253687426|ref|YP_003016616.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754004|gb|ACT12080.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 303

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 5/200 (2%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++A+ Y +LLGGK++R FLV     LF +   +     AA+ECIH YSLIHDDLP+MD+
Sbjct: 33  LVNAMEYGSLLGGKRLRPFLVYTTGELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  AI+AG+ L T AF I++ +P  Q+ D  R  ++  L    G+
Sbjct: 93  DDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAPMPQVSDRDRLAMISELAQASGV 152

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213
            GM GGQ  D++ E   +D   +  I + KTGAL+  A   GA+ +    +     L  +
Sbjct: 153 AGMCGGQAFDLEAEGHQVDLAALERIHRHKTGALIRAAVRLGALASGETGRAALPHLDRY 212

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 213 ANAIGLAFQVQDDILDVVGD 232


>gi|242373821|ref|ZP_04819395.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1]
 gi|242348375|gb|EES39977.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1]
          Length = 288

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L  ++ Y+L  GGK+IR  L+    ++   ++   ++   A+E IH YSLIHDDLP+
Sbjct: 22  NTDLEESMMYSLQAGGKRIRPVLLLLTLNMLKGDYDKGVQSALALEMIHTYSLIHDDLPA 81

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+   RRGK T H  Y E  AI+AG+ LLT AFE++S+ +  ++D ++ +L+  L+   
Sbjct: 82  MDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDEL-IEDKVKVKLVQRLSKAS 140

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ LD+Q E   +D T +  I K KTGAL+ FA  +   +A   Q   + L  
Sbjct: 141 GHLGMVGGQTLDMQSENKTVDLTTLEAIHKAKTGALLTFAVMAAVDIAQVDQETSDHLEK 200

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           F ++LG++FQ+ DDLLD   D  K
Sbjct: 201 FSQHLGLMFQIKDDLLDVYGDEEK 224


>gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1]
 gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1]
          Length = 295

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 128/225 (56%), Gaps = 12/225 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  L+ L +  +  +Q     RL +A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDAALEPLFIAPSKELQ-----RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQAN 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  +  
Sbjct: 67  GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLD 126

Query: 134 P--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189
           P    Q+ D+IR  ++  L    G  GM+GGQ +D+    + +D+  +  + + KTGAL+
Sbjct: 127 PCLSPQI-DSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALI 185

Query: 190 CFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   GA+  A A Q + + L+ + + +G+ FQ+ DD+LD E D
Sbjct: 186 EASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESD 230


>gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
           Pei191]
 gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
           Pei191]
          Length = 334

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 112/221 (50%), Gaps = 40/221 (18%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F       +    A+E +H YSLIHDDLPSMDN  +RRGKPT H
Sbjct: 44  GGKRVRPVLVMAAAEAFGKKAADVMPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSP---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             Y E  A++AG+ LLTYAFE+ +     K+    N    L L   + +G +GM+GGQ+ 
Sbjct: 104 KVYGEDLALLAGDALLTYAFEVFAQNGDVKSIGHKNTLKALQL-FANGVGSEGMVGGQVT 162

Query: 166 DIQDEFI------------------------------------DETQVFMIQKMKTGALM 189
           DI  E +                                     ET +  I   KTGAL+
Sbjct: 163 DIYAEGLIEGKFKRITAVKKESKALSKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALI 222

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             + E+GA++A AS+ ++  +R +G  +G+ FQ+ DD+LD 
Sbjct: 223 RSSIEAGAVLAGASEADRANMRKYGNAMGLAFQIVDDILDV 263


>gi|319937357|ref|ZP_08011764.1| geranyltranstransferase [Coprobacillus sp. 29_1]
 gi|319807723|gb|EFW04316.1| geranyltranstransferase [Coprobacillus sp. 29_1]
          Length = 282

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 117/208 (56%), Gaps = 10/208 (4%)

Query: 36  NDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  +  A+ Y+LL  GK++R  L       + +++   + +  AIE IH YSLIHDDLP 
Sbjct: 21  NGPVKEAMSYSLLAPGKRLRPLLFLSVLRSYQIDYHIYMDIACAIEMIHTYSLIHDDLPG 80

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRG+PT H Q+DE TAI+AG+ LL      I +    +  +++ +L+  L    
Sbjct: 81  MDNDDLRRGRPTCHKQFDEATAILAGDALLNLGVNTILN--ISIDSDLKVKLLNRLYEAS 138

Query: 155 GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G+ GM+ GQ  DI  + +  +  Q+  I K KTG L+  + + G+++A+ S  + +    
Sbjct: 139 GINGMIYGQQQDITFEKQLANLEQLKDIHKHKTGELIAVSMQLGSLIANPS--DYQYWTS 196

Query: 213 FGENLGIIFQLADDLLDC---EEDLPKK 237
            G +LG+ FQ+ DD+LD     E L KK
Sbjct: 197 IGFDLGLAFQIQDDILDVVGNTEQLGKK 224


>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
          Length = 303

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L +A+ +A +LGGK++R  L    ASL  N N     R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKAAVHHAVMLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFEI++S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILASRLFDEQGQGTDAAIVLKQVQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   +D+T++  I + KTGAL+  A   GA+   A  + 
Sbjct: 154 LATAS---SKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAGTDP 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR FG+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQFGQTIGLAFQVQDDILD 234


>gi|317178721|dbj|BAJ56509.1| geranyltranstransferase [Helicobacter pylori F30]
          Length = 303

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|114705301|ref|ZP_01438209.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506]
 gi|114540086|gb|EAU43206.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506]
          Length = 315

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 8/227 (3%)

Query: 6   PSKLQENS---KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           P++L+E +   KRI+  L ++L       Q Q  D + +++   L  GK++R  L    A
Sbjct: 3   PTRLEETTRLQKRIEQRLGEVL-PACLEGQEQLRDAIATSV---LAPGKRLRPLLAVLTA 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              N +   A+  G AIE IH  SL+ DDLP MD+  +RRG+P  H+ Y E TA++A   
Sbjct: 59  IDLNGDVEAAIEGGCAIELIHTASLVLDDLPCMDDATLRRGQPPTHVAYGEDTALLAVIA 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           +++ AFE++++  + L    R++ + +L   +G  G++ GQ  D++              
Sbjct: 119 MISRAFELLAAAPS-LNPEQRTRSVAALGKAVGTSGLVAGQFADLKGGSGSTDAAARTNA 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KTGAL   A E G I + A +  +  L  F   LG+ FQL DDLLD
Sbjct: 178 LKTGALFLAAVEIGMIGSGAPRETRRELEAFARELGLAFQLLDDLLD 224


>gi|312877544|ref|ZP_07737504.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795685|gb|EFR12054.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 299

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 135/246 (54%), Gaps = 23/246 (9%)

Query: 5   LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +  KL+E    + K+++  L+ +L + +  +  Q       A+RY++  GGK++R  L  
Sbjct: 2   ISRKLEEYINLSQKKVEEHLEKILAERSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54

Query: 60  ECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  A
Sbjct: 55  LSYQMLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114

Query: 117 IIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
           I+AG+ LL  A E+      +    K+ +++   L  +   G++GM+GGQ++DI +   D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRCGCEKNLVKAAKYLFWSS--GVEGMIGGQVIDITNSGQD 172

Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              E  +F +   KT  L+  +C  GA++A A  +    +  FG+NLG+ FQ+ DD+LD 
Sbjct: 173 IKSEELLFEMHLKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDV 232

Query: 231 EEDLPK 236
             D  K
Sbjct: 233 IGDSKK 238


>gi|283957030|ref|ZP_06374502.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791531|gb|EFC30328.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 281

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT+
Sbjct: 36  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTL 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D 
Sbjct: 96  HKSYDEPTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDC 153

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 154 FFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEENNQIYKLGLKLGLIFQIND 213

Query: 226 DLLDC 230
           D++D 
Sbjct: 214 DIIDV 218


>gi|21672714|ref|NP_660781.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25008653|sp|Q8K9A0|ISPA_BUCAP RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|21623357|gb|AAM67992.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 294

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 120/206 (58%), Gaps = 11/206 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++Y+ L GGK++R+ L+      F VN      + AA+E +H YSLIHDDLP +DN
Sbjct: 32  LFRAMKYSTLSGGKRLRACLIYATGETFQVNIAALDVISAAVELVHSYSLIHDDLPCIDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
            Y RRGK + HI+Y E  A++AG+ L   AF I+S+     + D+IR +++   ++ IG 
Sbjct: 92  DYFRRGKISCHIKYGENFALLAGDALQGLAFNILSNSNMPGVHDSIRLKMIAEFSNAIGY 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRC- 212
            GM  GQMLD++ E   I+ +++  I   KT  L+   C S  +   AS N  KE L   
Sbjct: 152 SGMCIGQMLDLEKERKKINISELEKINLYKTAFLI--RC-SIRLAYFASNNFSKEVLFIL 208

Query: 213 --FGENLGIIFQLADDLLDCEEDLPK 236
             F  ++G+ FQ+ DD+LD + D+ K
Sbjct: 209 DKFSVSIGLAFQIQDDILDLKNDIKK 234


>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 373

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 8/194 (4%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L  GK++R  L      L       A+    A+E IH  SLI DDLP MDN  +
Sbjct: 112 AMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDL 171

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  Y E  AI++G  LL+ AFE +++ +   +  + +  +  L  +IG +G++
Sbjct: 172 RRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWA--VRELARSIGTRGLV 229

Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GQ +DI  E +D  +V +     I   KT  L+  A   GAI+   S  E E +R F  
Sbjct: 230 AGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFAR 289

Query: 216 NLGIIFQLADDLLD 229
            +G++FQ+ DD+LD
Sbjct: 290 CIGLLFQVVDDILD 303


>gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8]
 gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8]
          Length = 298

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 128/223 (57%), Gaps = 11/223 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTAL 73
           ++D  LD  L + A+      ++RL   +RY++LGG K++R  L    A     +  TAL
Sbjct: 18  QVDRELDRCLARNAT------SERLQETMRYSVLGGGKRVRPALCMAAARAMGSDESTAL 71

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT HI +DE +AI+AG+ L T AF ++S 
Sbjct: 72  APACALELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASAILAGDALQTLAFALLSD 131

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCF 191
               L D  R  ++  L    G QGM+GGQ +D++   + +   Q+  + + KTGAL+  
Sbjct: 132 APA-LSDRQRVTMISELARASGHQGMVGGQAIDLESVGQQLSVAQLETMHRHKTGALIEA 190

Query: 192 ACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   GA+ +   ++ +   L  +   LG+ FQ+ DDLLD E D
Sbjct: 191 SVRLGALTSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGD 233


>gi|332141878|ref|YP_004427616.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551900|gb|AEA98618.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 296

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 128/226 (56%), Gaps = 14/226 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           Q+    + T++D+L           +  RL  A+R+ALL GGK++R  LV    +  +V 
Sbjct: 12  QQTDASLLTLIDEL---------PDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVP 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +  AIEC+H YSL+HDDLP+MD+  +RRG PT HI +DE TAI+AG+ L   AF
Sbjct: 63  KTDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAF 122

Query: 129 EIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
            +++ +P +   +  R QL+  L  + G  GM GGQ +D+    E I   ++  + K+KT
Sbjct: 123 TVLADAPLSTYAEAKRPQLLSVLAKSAGYVGMCGGQAIDLASTGESISLDELKRLHKLKT 182

Query: 186 GALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDC 230
           GAL+    E  AI++     E K  L  +  ++G+ FQ+ DD+LD 
Sbjct: 183 GALLRACVEMVAIVSEDLLPEAKVDLMAYAADIGLAFQVQDDILDV 228


>gi|256962594|ref|ZP_05566765.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
 gi|257086340|ref|ZP_05580701.1| polyprenyl synthetase [Enterococcus faecalis D6]
 gi|307271992|ref|ZP_07553259.1| geranyltranstransferase [Enterococcus faecalis TX0855]
 gi|256953090|gb|EEU69722.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
 gi|256994370|gb|EEU81672.1| polyprenyl synthetase [Enterococcus faecalis D6]
 gi|306511339|gb|EFM80342.1| geranyltranstransferase [Enterococcus faecalis TX0855]
 gi|315026958|gb|EFT38890.1| geranyltranstransferase [Enterococcus faecalis TX2137]
          Length = 293

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQKLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
 gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1]
          Length = 295

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 121/201 (60%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY+++ GGK++R  L              A     A+E IH YSL+HDDLP+MD
Sbjct: 30  RLYEAMRYSVMNGGKRVRPLLAYAACEALGGKAEQANGAACAVELIHAYSLVHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIG 155
           +  +RRG+PT H ++DE  AI+AG+GL + AF  +  P+ + L  +IR Q + +L H  G
Sbjct: 90  DDDLRRGQPTTHKKFDEACAILAGDGLQSLAFSALLDPRLSDLSADIRLQQVTALAHAAG 149

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRC 212
             GM+GGQ +D+      +D+  +  + + KTGAL+  + + GA+ +  A ++E + L+ 
Sbjct: 150 PAGMVGGQAIDLGSVGLKLDQKALEQMHRHKTGALIEVSVKLGALASGCAEKDELKSLQT 209

Query: 213 FGENLGIIFQLADDLLDCEED 233
           + + +G+ FQ+ DD+LD E D
Sbjct: 210 YAQAIGLAFQVQDDILDVESD 230


>gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
 gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
          Length = 294

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 109/200 (54%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA++GG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  KLHEAMRYAVMGGGKRVRPLLCHAAGELTGATEAARNAASAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVHIQYDE TA++ G+ L + AF +  +    L    ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHIQYDEPTALLVGDALQSQAF-VALTDAAALTAVQQAALVRELALASGS 149

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCF 213
            GM GGQ +D+      +   Q+  + + KTGAL+  A   GA+      ++  R L  +
Sbjct: 150 VGMAGGQAIDLASVGLMLTREQLETMHRKKTGALLRAAVRMGALAGETPSDDTMRALDVY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
            + +G+ FQ+ DD+LD   D
Sbjct: 210 ADAIGLAFQVVDDILDVTTD 229


>gi|329574366|gb|EGG55938.1| geranyltranstransferase [Enterococcus faecalis TX1467]
          Length = 286

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G I+A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGILANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|237750142|ref|ZP_04580622.1| geranyltranstransferase [Helicobacter bilis ATCC 43879]
 gi|229374329|gb|EEO24720.1| geranyltranstransferase [Helicobacter bilis ATCC 43879]
          Length = 293

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 9/190 (4%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R + L++   +        A  V  +IEC+H YSLIHDDLP+MDN  +RR  PT+
Sbjct: 40  GGKRFRPNLLLSVVCAEAKEQAKNAFDVCLSIECLHTYSLIHDDLPAMDNAALRRNHPTL 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +YDEV+AI+ G+GL TY+F ++++       ++ ++L+  L  N G+ GM+ GQ LD 
Sbjct: 100 HCKYDEVSAILIGDGLNTYSFYLLAN--AHFAPSVVAELISCLAENGGIGGMVLGQALDC 157

Query: 168 QDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             E     +D+ Q   I   KT  L+  + + GAI+A+ S + ++ L  FG  LG+ FQ+
Sbjct: 158 YFEHTTLPLDKLQ--FIHTHKTAKLIAASLKMGAIIANLSLDMQKFLYDFGLVLGLYFQI 215

Query: 224 ADDLLDCEED 233
            DD++D  +D
Sbjct: 216 RDDIIDSIQD 225


>gi|15224064|ref|NP_179960.1| GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|75218930|sp|O04046|GGPP2_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 2; Short=GGPP
           synthase 2; Short=GGPS2; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 2; AltName:
           Full=Dimethylallyltranstransferase 2; AltName:
           Full=Farnesyl diphosphate synthase 2; AltName:
           Full=Farnesyltranstransferase 2; AltName:
           Full=Geranyltranstransferase 2; Flags: Precursor
 gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
 gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
 gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
          Length = 376

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 8/194 (4%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L  GK++R  L      L       A+    A+E IH  SLI DDLP MDN  +
Sbjct: 115 AMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDL 174

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  Y E  AI++G  LL+ AFE +++ +   +  + +  +  L  +IG +G++
Sbjct: 175 RRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWA--VRELARSIGTRGLV 232

Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GQ +DI  E +D  +V +     I   KT  L+  A   GAI+   S  E E +R F  
Sbjct: 233 AGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFAR 292

Query: 216 NLGIIFQLADDLLD 229
            +G++FQ+ DD+LD
Sbjct: 293 CIGLLFQVVDDILD 306


>gi|315149503|gb|EFT93519.1| geranyltranstransferase [Enterococcus faecalis TX0012]
          Length = 293

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1]
 gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter sp. ADP1]
          Length = 302

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 7/198 (3%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L SA+ +  +LGGK++R  L    AS+  N N+  A R   A+E IHCYSL HDDLP MD
Sbjct: 36  LKSAVYHTVMLGGKRVRPALCYAVASMEKNPNYAAARRAAVAVELIHCYSLAHDDLPCMD 95

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT H+ + E TA++AG+ L + AFE++ S     ++++ + ++L     +  
Sbjct: 96  NDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQQNSVDASIVLRQMQILAT 155

Query: 157 QG--MLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211
               M+ GQ+LD+Q E   ID+ Q+  I + KTGAL+  A   GA+   +  ++    LR
Sbjct: 156 ASSKMVCGQVLDLQAEGKEIDQEQLENIHRNKTGALIQAALMMGAVTLFSGMDQAIPHLR 215

Query: 212 CFGENLGIIFQLADDLLD 229
            FG+ +G+ FQ+ DD+LD
Sbjct: 216 QFGQRIGLAFQVQDDILD 233


>gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
 gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
 gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1]
 gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229]
 gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
 gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20]
 gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
 gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH]
 gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU]
 gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280]
 gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
 gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1]
 gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
 gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH]
 gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU]
 gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280]
 gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
 gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
 gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20]
 gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229]
          Length = 294

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L   +        AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH++YDE TA++ G+ L + AF  ++     L  + ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALTD-AAALPADRQAALVRELALASGS 149

Query: 157 QGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKER-LRCF 213
            GM GGQ +D+    +  T+  +  + +MKTGAL+  +   GA+       +  R L  +
Sbjct: 150 IGMAGGQAIDLASVGVALTRDALEKMHRMKTGALLRASVRMGALAGETPSGDAMRALDAY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 210 AAAVGLAFQVVDDILDVTTD 229


>gi|78223142|ref|YP_384889.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15]
 gi|78194397|gb|ABB32164.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15]
          Length = 297

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 121/199 (60%), Gaps = 12/199 (6%)

Query: 42  AIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           A+RY++  GGK+IR  L +  C ++     L AL    A+E IH YSLIHDDLP+MD+  
Sbjct: 35  AMRYSVFAGGKRIRPVLMLAACEAVGGTPDL-ALPAACAMEMIHTYSLIHDDLPAMDDDD 93

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--- 156
            RRG+PT H  + E  AI+AG+ LLT AF ++SSP+   K       +L + H IG+   
Sbjct: 94  FRRGRPTNHKVFGEAIAILAGDALLTEAFILMSSPEYAAKAG--HARILPVIHEIGICAG 151

Query: 157 -QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            +GM+GGQ++D++ E    ID   V  I   KTGALM  + ++GAI+  A  +    +  
Sbjct: 152 SRGMVGGQVVDMESEGKKDIDLATVQYIHTHKTGALMKASVKAGAILGGAEGDALAAMTR 211

Query: 213 FGENLGIIFQLADDLLDCE 231
           +GE +G+ FQ+ADD+LD E
Sbjct: 212 YGEAIGLAFQIADDILDIE 230


>gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
 gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
 gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668]
 gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
 gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305]
 gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98]
 gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14]
 gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91]
 gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9]
 gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210]
 gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894]
 gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177]
 gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112]
 gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215]
 gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576]
 gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
 gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
 gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
 gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
 gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
 gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13]
 gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
 gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
 gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
 gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
 gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668]
 gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
 gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305]
 gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
 gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
 gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13]
 gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
 gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576]
 gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
 gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
 gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
 gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
          Length = 294

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L   +        AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH++YDE TA++ G+ L + AF  ++     L  + ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALTD-AAALPADRQAALVRELALASGS 149

Query: 157 QGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCF 213
            GM GGQ +D+    +  T+  +  + +MKTGAL+  +   GA+       +  R L  +
Sbjct: 150 IGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRASVRMGALAGETPSGDAMRALDAY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 210 AAAVGLAFQVVDDILDVTTD 229


>gi|313669268|ref|YP_004049552.1| geranyltranstransferase [Neisseria lactamica ST-640]
 gi|313006730|emb|CBN88200.1| geranyltranstransferase [Neisseria lactamica 020-06]
          Length = 298

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   + L         +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAVLDGGKRLRPMLVLAASELGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H++Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +    + +  +  +  +KTGAL+  A   GA+   +  +N    L  +   L
Sbjct: 158 GGQTIDLANVGRQMPQADLEQMHSLKTGALIRAAVVLGAMSCPNLPENSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
          Length = 294

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTD-AAALSPVQQAALVRELALASGS 149

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+     S +    L  +
Sbjct: 150 IGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSADAMAALDVY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 210 AGAVGLAFQVVDDILDVTTD 229


>gi|261402402|ref|YP_003246626.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7]
 gi|261369395|gb|ACX72144.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7]
          Length = 317

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 12/198 (6%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ND L +A ++ L  GGK++R +L     +L   N    L   AA+E IH Y+LIHDD+  
Sbjct: 22  NDELYNASKHLLFAGGKRLRPYLTVITYNLKKDNMEEILPAAAAVELIHNYTLIHDDI-- 79

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGKPTVH+ Y E  AI+AG+ L   AFE +S+    +KD+ ++  +L +    
Sbjct: 80  MDNDDERRGKPTVHVVYGEPIAILAGDLLYAKAFEAVSN----IKDSKKAHDVLKILSKA 135

Query: 155 GLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            ++ +  GQ +D++ E  +   E  + MI+K KTGAL+  + E GAIMA  S+ EK  L+
Sbjct: 136 CVE-VCEGQAMDMKFENYNPTMEEYLEMIRK-KTGALLEASVEIGAIMADCSEEEKTALK 193

Query: 212 CFGENLGIIFQLADDLLD 229
            + + +G+ FQ+ DD+LD
Sbjct: 194 EYAKRIGLTFQIQDDVLD 211


>gi|212709179|ref|ZP_03317307.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM
           30120]
 gi|212688091|gb|EEB47619.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM
           30120]
          Length = 305

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 115/197 (58%), Gaps = 5/197 (2%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++Y  LLGGK++R FL      +  V+        AA+ECIH YSLIHDDLP+MD+
Sbjct: 38  LAQAMKYGTLLGGKRLRPFLTYAVGEMLGVSLDNLDAPAAAVECIHAYSLIHDDLPAMDD 97

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  A++AG+ L T+AF+++SS     + D  R  ++  L +  GL
Sbjct: 98  DDLRRGQPTCHIKFGEGNAVLAGDALQTFAFQLLSSASMPDVSDKDRIAMIAELAYASGL 157

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCF 213
            GM GGQ LD+  E   +D   +  I + KTGAL+  A   GA  A H        L  +
Sbjct: 158 AGMCGGQALDLDAEGKRVDLVSLERIHQHKTGALIRAAIRLGAYAAGHKGYQALTNLDKY 217

Query: 214 GENLGIIFQLADDLLDC 230
            E++G+ FQ+ DD+LD 
Sbjct: 218 AESIGLAFQVQDDILDV 234


>gi|317014338|gb|ADU81774.1| geranyltranstransferase [Helicobacter pylori Gambia94/24]
          Length = 303

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 11/194 (5%)

Query: 49  GGKKIRS--FLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK+ R   FL   CA +   ++L       ++  +IEC+H YSLIHDDLP MDN  +RR
Sbjct: 45  GGKRFRPKLFLAVLCALVGKKDYLNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRR 104

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
             PT+H +YDE TA++ G+ L TY+FE++S+    L+  I  +L+  L+ N G++GM+ G
Sbjct: 105 NHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESRIIVELVKILSANGGIKGMILG 162

Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGI 219
           Q LD   ++  ++  Q+  + + KT  L+  +   G + +  +  E  + L+ FG  +G+
Sbjct: 163 QALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASGINDEELLKWLQAFGLKMGL 222

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD++D  +D
Sbjct: 223 CFQVLDDIIDVTQD 236


>gi|317011137|gb|ADU84884.1| geranyltranstransferase [Helicobacter pylori SouthAfrica7]
          Length = 303

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 123/216 (56%), Gaps = 17/216 (7%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASLFNVNHLTA----LRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA     ++L       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALAGKKDYLNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G +   
Sbjct: 144 VELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLV--- 200

Query: 202 ASQNEKER----LRCFGENLGIIFQLADDLLDCEED 233
           AS N+ E     L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 201 ASGNKDEELFRWLQDFGLKMGLCFQVLDDIIDVTQD 236


>gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
 gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
          Length = 294

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     L    ++ L+  L    G 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADA-LSPVQQAALVRELALASGS 149

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+     S +    L  +
Sbjct: 150 IGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADAMAALDVY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 210 AGAVGLAFQVVDDILDVTTD 229


>gi|257081234|ref|ZP_05575595.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
 gi|256989264|gb|EEU76566.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
          Length = 293

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
 gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
          Length = 294

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 109/205 (53%), Gaps = 15/205 (7%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     SP  Q      + L+  L 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDALSPVQQ------AALVRELA 144

Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-E 208
              G  GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+       E   
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGDTPSAETLA 204

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  +   +G+ FQ+ DD+LD   D
Sbjct: 205 ALDVYAAAVGLAFQVVDDILDVTTD 229


>gi|156935030|ref|YP_001438946.1| geranyltranstransferase [Cronobacter sakazakii ATCC BAA-894]
 gi|156533284|gb|ABU78110.1| hypothetical protein ESA_02881 [Cronobacter sakazakii ATCC BAA-894]
          Length = 299

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 13/204 (6%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+ Y  LLGGK++R FLV     +F VN        AAIECIH YSL+HDDLP+MD+
Sbjct: 32  LVEAMLYGTLLGGKRLRPFLVYATGEMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDD 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E +AI+AG+ L T AF I+S +P   +    R  ++  L    G+
Sbjct: 92  DDLRRGQPTCHIRFGEASAILAGDALQTLAFSILSDAPMENVALRDRLAMVSELAKASGV 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM GGQ LD++ E   +D   +  I + KTGAL+  A   GA+ A     +K R     
Sbjct: 152 AGMCGGQALDLEAEGQQVDLDALERIHRHKTGALIRAAVRMGALCA----GDKGRDALVY 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + +++G+ FQ+ DD+LD   D
Sbjct: 208 LDSYADSIGLAFQVQDDILDVVGD 231


>gi|257083890|ref|ZP_05578251.1| geranyltranstransferase [Enterococcus faecalis Fly1]
 gi|256991920|gb|EEU79222.1| geranyltranstransferase [Enterococcus faecalis Fly1]
          Length = 293

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|315173304|gb|EFU17321.1| geranyltranstransferase [Enterococcus faecalis TX1346]
          Length = 293

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|294782565|ref|ZP_06747891.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
 gi|294481206|gb|EFG28981.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
          Length = 298

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 7/209 (3%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + + +   + YALL GGK++R FL+     L N +    ++    +E IH YSL+HDDLP
Sbjct: 29  YPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKSAIGVEMIHSYSLVHDDLP 88

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           ++DN   RRGK T H  + E  AI+ G+ LLTYAF ++S     +    +   ++S T  
Sbjct: 89  ALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYMLSEKNLNILSFEQITNIISKTSA 148

Query: 154 I-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G+ GM+GGQM+DI+ E   I+   +  I K KTG L+    E   I+A  S++++  L
Sbjct: 149 YSGINGMIGGQMIDIESENKKINLETLKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVL 208

Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236
             + E +G+ FQ+ DD+LD E   EDL K
Sbjct: 209 EEYAELIGLAFQVKDDILDIEGTFEDLGK 237


>gi|251790664|ref|YP_003005385.1| geranyltranstransferase [Dickeya zeae Ech1591]
 gi|247539285|gb|ACT07906.1| Polyprenyl synthetase [Dickeya zeae Ech1591]
          Length = 303

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 129/230 (56%), Gaps = 16/230 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L  + +RID  L   +    S +  Q +  + +    ALLGGK++R FLV     LF +
Sbjct: 7   QLAAHHQRIDAALSHFI----SALPFQSSPLVAAMAHGALLGGKRLRPFLVYSTGRLFAI 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ L T A
Sbjct: 63  AQDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQTLA 122

Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F I++ +P   + D  R  ++  L    G+ GM GGQ LD++ E   +D   +  I + K
Sbjct: 123 FSILADAPMPGVSDRDRLAMISELARASGVAGMCGGQALDLEAEGLQVDLQTLERIHRHK 182

Query: 185 TGALMCFACESGAIMAHASQNEKERLRC-----FGENLGIIFQLADDLLD 229
           TGAL+  +   GA+ A     E+ RL       + + +G+ FQ+ DD+LD
Sbjct: 183 TGALIRASVRLGALAA----GERGRLALPCLDRYADAIGLAFQVQDDILD 228


>gi|227517904|ref|ZP_03947953.1| geranyltranstransferase [Enterococcus faecalis TX0104]
 gi|229548922|ref|ZP_04437647.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200]
 gi|255971435|ref|ZP_05422021.1| polyprenyl synthetase [Enterococcus faecalis T1]
 gi|255974048|ref|ZP_05424634.1| polyprenyl synthetase [Enterococcus faecalis T2]
 gi|256617904|ref|ZP_05474750.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761737|ref|ZP_05502317.1| polyprenyl synthetase [Enterococcus faecalis T3]
 gi|256960163|ref|ZP_05564334.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
 gi|257089390|ref|ZP_05583751.1| polyprenyl synthetase [Enterococcus faecalis CH188]
 gi|257415599|ref|ZP_05592593.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG]
 gi|257421230|ref|ZP_05598220.1| geranyltranstransferase [Enterococcus faecalis X98]
 gi|293382531|ref|ZP_06628465.1| geranyltranstransferase [Enterococcus faecalis R712]
 gi|293387869|ref|ZP_06632408.1| geranyltranstransferase [Enterococcus faecalis S613]
 gi|307275463|ref|ZP_07556605.1| geranyltranstransferase [Enterococcus faecalis TX2134]
 gi|307278969|ref|ZP_07560028.1| geranyltranstransferase [Enterococcus faecalis TX0860]
 gi|312900452|ref|ZP_07759759.1| geranyltranstransferase [Enterococcus faecalis TX0470]
 gi|312904544|ref|ZP_07763702.1| geranyltranstransferase [Enterococcus faecalis TX0635]
 gi|312906866|ref|ZP_07765863.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512]
 gi|312952746|ref|ZP_07771608.1| geranyltranstransferase [Enterococcus faecalis TX0102]
 gi|312978879|ref|ZP_07790605.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516]
 gi|227074658|gb|EEI12621.1| geranyltranstransferase [Enterococcus faecalis TX0104]
 gi|229305943|gb|EEN71939.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200]
 gi|255962453|gb|EET94929.1| polyprenyl synthetase [Enterococcus faecalis T1]
 gi|255966920|gb|EET97542.1| polyprenyl synthetase [Enterococcus faecalis T2]
 gi|256597431|gb|EEU16607.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682988|gb|EEU22683.1| polyprenyl synthetase [Enterococcus faecalis T3]
 gi|256950659|gb|EEU67291.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
 gi|256998202|gb|EEU84722.1| polyprenyl synthetase [Enterococcus faecalis CH188]
 gi|257157427|gb|EEU87387.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG]
 gi|257163054|gb|EEU93014.1| geranyltranstransferase [Enterococcus faecalis X98]
 gi|291080079|gb|EFE17443.1| geranyltranstransferase [Enterococcus faecalis R712]
 gi|291082716|gb|EFE19679.1| geranyltranstransferase [Enterococcus faecalis S613]
 gi|295113841|emb|CBL32478.1| farnesyl-diphosphate synthase [Enterococcus sp. 7L76]
 gi|306504356|gb|EFM73567.1| geranyltranstransferase [Enterococcus faecalis TX0860]
 gi|306507851|gb|EFM76979.1| geranyltranstransferase [Enterococcus faecalis TX2134]
 gi|310627120|gb|EFQ10403.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512]
 gi|310629262|gb|EFQ12545.1| geranyltranstransferase [Enterococcus faecalis TX0102]
 gi|310632057|gb|EFQ15340.1| geranyltranstransferase [Enterococcus faecalis TX0635]
 gi|311288316|gb|EFQ66872.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516]
 gi|311292428|gb|EFQ70984.1| geranyltranstransferase [Enterococcus faecalis TX0470]
 gi|315153058|gb|EFT97074.1| geranyltranstransferase [Enterococcus faecalis TX0031]
 gi|315156830|gb|EFU00847.1| geranyltranstransferase [Enterococcus faecalis TX0043]
 gi|315157617|gb|EFU01634.1| geranyltranstransferase [Enterococcus faecalis TX0312]
 gi|315171919|gb|EFU15936.1| geranyltranstransferase [Enterococcus faecalis TX1342]
 gi|315577402|gb|EFU89593.1| geranyltranstransferase [Enterococcus faecalis TX0630]
          Length = 293

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|332673768|gb|AEE70585.1| geranyltranstransferase [Helicobacter pylori 83]
          Length = 303

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++   IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALGIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|254451013|ref|ZP_05064450.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238]
 gi|198265419|gb|EDY89689.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238]
          Length = 301

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 116/200 (58%), Gaps = 17/200 (8%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+ YA+ GGK +R FLV E A L  V    A  +  AIE +H YSLIHDDLP MD+  +R
Sbjct: 46  AMMYAVRGGKSLRGFLVLEGARLHGVQERIAAPIAGAIEAMHAYSLIHDDLPCMDDDDLR 105

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RGKPTVH ++DE TA++ G+ L   AFE+I     +P+T++       L   L  + G +
Sbjct: 106 RGKPTVHRKWDEATAVLTGDALQALAFELIMLADITPETKV------VLAHMLAVDAGER 159

Query: 158 GMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           GM+GGQ  DI  E         ++  +Q  KTGAL+ +AC +G  +A A +     +R +
Sbjct: 160 GMVGGQAADIAAESAAAALTLGEIESLQAKKTGALVEWACAAGPRIAGADEMP---MRQY 216

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  LG  FQ+ADD+LD   D
Sbjct: 217 GRALGRAFQIADDILDVTGD 236


>gi|283769470|ref|ZP_06342366.1| putative geranyltranstransferase [Bulleidia extructa W1219]
 gi|283103738|gb|EFC05124.1| putative geranyltranstransferase [Bulleidia extructa W1219]
          Length = 276

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 118/199 (59%), Gaps = 11/199 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ YAL+  GK+IR  ++      F +          A+E IH YSLIHDDLP+MD+
Sbjct: 18  LKKAMEYALMTKGKRIRPQIIFHTLKAFGLQEELGYAYACALEYIHTYSLIHDDLPAMDD 77

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH+ + E  AI+AG+ LLT +F  ++      K N+++  +LS   + G  
Sbjct: 78  DVLRRGKPTVHVSFGEDLAILAGDALLTESFYQLTKNTLSDKQNLKALEVLS--SHAGAN 135

Query: 158 GMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF--- 213
           GM+ GQ++D++ ++F  +  +  + + KTG L+  + E GAI A    N+ E+L  F   
Sbjct: 136 GMVLGQVMDMRTNQFSTQEDIETMLEKKTGRLLESSFELGAIAA----NQLEQLMSFQEA 191

Query: 214 GENLGIIFQLADDLLDCEE 232
           G+ +G+ FQ+ DDLL+ E+
Sbjct: 192 GKWIGLAFQIQDDLLEVEK 210


>gi|215485502|ref|YP_002327933.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
 gi|312964557|ref|ZP_07778813.1| geranyltranstransferase [Escherichia coli 2362-75]
 gi|215263574|emb|CAS07904.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
 gi|312290791|gb|EFR18668.1| geranyltranstransferase [Escherichia coli 2362-75]
 gi|315299587|gb|EFU58835.1| polyprenyl synthetase [Escherichia coli MS 16-3]
 gi|323191339|gb|EFZ76602.1| geranyltranstransferase [Escherichia coli RN587/1]
          Length = 299

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPV 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231


>gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
 gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
          Length = 292

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 4/199 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q  ++L  ++ Y+L+ GGK+IR  L      + +           A+ECIH YSL+HDDL
Sbjct: 26  QEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDL 85

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN   RRG  T H  Y E  AI+AG+GLLTYAF++++S  T      +   +  +  
Sbjct: 86  PAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTS-NTVASAQQKLDAIQCVAT 144

Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+GGQ  D+  +D+ I   ++ ++   KTGAL   + E G I+  A+   +  L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHSGKTGALFNASVELGLILGCANNTTRTAL 204

Query: 211 RCFGENLGIIFQLADDLLD 229
             +   LG++FQ+ DD+LD
Sbjct: 205 MEYSNCLGLLFQITDDILD 223


>gi|317455530|pdb|3Q1O|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori Complexed With Magnesium And Isoprenyl
           Diphosphate
 gi|317455531|pdb|3Q1O|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori Complexed With Magnesium And Isoprenyl
           Diphosphate
 gi|317455532|pdb|3Q1O|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori Complexed With Magnesium And Isoprenyl
           Diphosphate
 gi|317455533|pdb|3Q1O|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori Complexed With Magnesium And Isoprenyl
           Diphosphate
          Length = 310

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 35  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 94

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 95  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 152

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 153 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASG 212

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 213 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 245


>gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 292

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 4/195 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++ Y+L+ GGK+IR  L      + +           A+ECIH YSL+HDDLP+MDN
Sbjct: 31  LYESMNYSLMQGGKRIRPILSKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDN 90

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG  T H  Y E  AI+AG+GLLTYAF+++++ KT         +    T   G +
Sbjct: 91  DDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTANKTATAQEKLDAIQCVAT-AAGPE 149

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ  D+  +++ I   ++ ++ + KTGAL   + E G I+ +A    +  L  +  
Sbjct: 150 GMVGGQAFDMLSENKHIPLEELQVLHRGKTGALFNASVELGLILGNADTATRTALMKYAN 209

Query: 216 NLGIIFQLADDLLDC 230
            LG++FQ+ DD+LD 
Sbjct: 210 CLGLLFQITDDILDV 224


>gi|262068286|ref|ZP_06027898.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
 gi|291378024|gb|EFE85542.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
          Length = 298

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 4/201 (1%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + + +   + YALL GGK++R FL+     L N +    ++    IE IH YSL+HDDLP
Sbjct: 29  YPETIAKGMEYALLNGGKRLRPFLLFTTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLP 88

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           ++DN   RRGK T H  + E  AI+ G+ LLTYAF ++S     L    +   ++S T  
Sbjct: 89  ALDNDDYRRGKLTTHKVFGEAEAILIGDALLTYAFYMLSQKNLNLLSFEQITNIISKTSA 148

Query: 154 I-GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G+ GM+GGQM+DI+ E   I+   +  I K KTG L+    E   I+A  S++++  L
Sbjct: 149 YAGINGMIGGQMIDIESENKKINLETLKYIHKHKTGKLIKLPIEIACIIAGVSEDKRLVL 208

Query: 211 RCFGENLGIIFQLADDLLDCE 231
             + E +G+ FQ+ DD+LD E
Sbjct: 209 EEYAELIGLAFQVKDDILDIE 229


>gi|217033990|ref|ZP_03439413.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10]
 gi|216943623|gb|EEC23071.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10]
          Length = 303

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 13/214 (6%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALMGKKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G ++A 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202

Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
             ++E   + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 203 GIKDEGLFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|170025469|ref|YP_001721974.1| geranyltranstransferase [Yersinia pseudotuberculosis YPIII]
 gi|169752003|gb|ACA69521.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 306

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 119/203 (58%), Gaps = 5/203 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L+ A+RY A++GGK++R +LV     +F ++        AAIECIH YSLIHDDLP+
Sbjct: 36  NSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGLSFANLDAPAAAIECIHAYSLIHDDLPA 95

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT H+++ E  AI+AG+ L T AF I++ +P   + D  R  +++ L   
Sbjct: 96  MDDDDLRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQA 155

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210
            G  GM  GQ LD++ E   +    +  I + KTGAL+  A   GA+ A  A +     L
Sbjct: 156 SGAAGMCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGALAAGEAGRKTLLSL 215

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             + E +G+ FQ+ DD+LD   D
Sbjct: 216 DRYAEAIGLAFQVQDDILDVIGD 238


>gi|251782890|ref|YP_002997193.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391520|dbj|BAH81979.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 290

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|146329907|ref|YP_001209557.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A]
 gi|146233377|gb|ABQ14355.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A]
          Length = 280

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 117/203 (57%), Gaps = 11/203 (5%)

Query: 35  HNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H++ LL+ A+RY+ L  GK++R+ L+   A  F++          A+ECIH YSLIHDDL
Sbjct: 20  HDESLLTKAMRYSTLNAGKRLRAALIYAVAEDFSLPLSLVDNAACALECIHAYSLIHDDL 79

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN  +RRGK + H  +DE TAI+AG+ L T AF +++  +      IR      L+ 
Sbjct: 80  PAMDNDDLRRGKASCHKAFDEATAILAGDALNTLAFALLARDEKNGLAQIR-----CLSA 134

Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G   M+ GQ LD+      ID  ++ +I + KTGAL+  A   GA+ +    + + +L
Sbjct: 135 AAG--AMVCGQSLDMIYTGTAIDVQKLQIIHQKKTGALLTAALHLGALPSPDYAHYQTQL 192

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
              GE++GI +Q+ DD+LD   D
Sbjct: 193 TAIGEHIGIAYQIIDDMLDATSD 215


>gi|15645545|ref|NP_207721.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695]
 gi|2314066|gb|AAD07974.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695]
          Length = 303

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|15675402|ref|NP_269576.1| putative geranyltranstransferase [Streptococcus pyogenes M1 GAS]
 gi|71911044|ref|YP_282594.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
           pyogenes MGAS5005]
 gi|13622588|gb|AAK34297.1| putative geranyltranstransferase (farnesyl diphosphate synthase)
           [Streptococcus pyogenes M1 GAS]
 gi|71853826|gb|AAZ51849.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
           pyogenes MGAS5005]
 gi|323127694|gb|ADX24991.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 290

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALITEQAMTVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002]
 gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002]
          Length = 293

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 11/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++T L+  L       +T    +L  A+RYA+LGG K++R  L      L        
Sbjct: 12  ERVETALEHYL-----PAETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGELTGARAERL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF +++
Sbjct: 67  DAAAAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQAFVVLT 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
           S    L    ++ L+  L    G  GM GGQ +D+      +   ++  + +MKTGAL+ 
Sbjct: 127 S--DVLGQPQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRPRLETMHRMKTGALLR 184

Query: 191 FACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
            A   GA+       +    L  +   +G+ FQ+ DD+LD   D
Sbjct: 185 AAVRMGALAGETPDAQALASLDAYAAAVGLAFQVVDDILDVTTD 228


>gi|29375563|ref|NP_814717.1| geranyltranstransferase [Enterococcus faecalis V583]
 gi|227555091|ref|ZP_03985138.1| geranyltranstransferase [Enterococcus faecalis HH22]
 gi|257418572|ref|ZP_05595566.1| polyprenyl synthetase [Enterococcus faecalis T11]
 gi|29343024|gb|AAO80787.1| geranyltranstransferase [Enterococcus faecalis V583]
 gi|227175759|gb|EEI56731.1| geranyltranstransferase [Enterococcus faecalis HH22]
 gi|257160400|gb|EEU90360.1| polyprenyl synthetase [Enterococcus faecalis T11]
 gi|315168053|gb|EFU12070.1| geranyltranstransferase [Enterococcus faecalis TX1341]
          Length = 293

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|299143832|ref|ZP_07036912.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518317|gb|EFI42056.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 290

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 12/214 (5%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHD 90
           ++  ++  ++ Y+L  GGK++R  L +    S+      T  L    AIE IH YSLIHD
Sbjct: 29  EYQKKVYESMSYSLSSGGKRVRPLLSLLAYKSVSGSEDFTKILPFATAIELIHTYSLIHD 88

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS------SPKTQLKDNIRS 144
           DLP+MDN  +RRGKPT H  Y E  AI+AG+GLL  + E++S          +LK  I++
Sbjct: 89  DLPAMDNDDLRRGKPTNHKVYSEAIAILAGDGLLNMSAEVMSRELDKYDEMDELKRAIKA 148

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKMKTGALMCFACESGAIMAHAS 203
             M  +    G+ GM+GGQ++D++  +     +   + K+KT AL+  A  SGAI+A AS
Sbjct: 149 --MKYIFTASGVHGMIGGQVIDMEYGYNMNLDICESMYKLKTAALIKAAIVSGAIIAGAS 206

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
             E      +   +GI +Q+ DD+LD E D  K+
Sbjct: 207 DEEIATFEEYANCIGIAYQIRDDILDLEADSKKE 240


>gi|170767787|ref|ZP_02902240.1| geranyltranstransferase [Escherichia albertii TW07627]
 gi|170123275|gb|EDS92206.1| geranyltranstransferase [Escherichia albertii TW07627]
          Length = 299

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYAIGQMFGVSLSTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRLAMISELAN 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLDAEGKQVPLEALERIHRHKTGALIRAAVRLGALSAGEKGRNALPI 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231


>gi|315574274|gb|EFU86465.1| geranyltranstransferase [Enterococcus faecalis TX0309B]
 gi|315581571|gb|EFU93762.1| geranyltranstransferase [Enterococcus faecalis TX0309A]
          Length = 293

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 26  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 86  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 143

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 144 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 203

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 204 QFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|242240309|ref|YP_002988490.1| geranyltranstransferase [Dickeya dadantii Ech703]
 gi|242132366|gb|ACS86668.1| Polyprenyl synthetase [Dickeya dadantii Ech703]
          Length = 303

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           +L  + +RI+T L   +    S +  Q    L+ A+ Y +LLGGK++R FLV     LFN
Sbjct: 7   QLHAHHQRINTTLRRFI----SALPFQQIP-LIEAMAYGSLLGGKRLRPFLVYSTGRLFN 61

Query: 67  VNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +  L +L V  AA+ECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ L T
Sbjct: 62  LP-LESLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDALQT 120

Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
            AF I++  +  ++ D  R  ++  L    G+ GM GGQ LD++ E   +D   +  I +
Sbjct: 121 LAFSILAGTEMPRVSDRDRLSMIAELASASGVGGMCGGQALDLEAEGRQVDLAALEQIHR 180

Query: 183 MKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KTGAL+  +   GA+ A  A +     L  +   +G+ FQ+ DD+LD   D
Sbjct: 181 HKTGALIRASVRLGALAAGEAGRQVMPSLDRYANAIGLAFQVQDDILDVIGD 232


>gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
           DSM 15981]
 gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
           DSM 15981]
          Length = 303

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 13/232 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           ++++  +K I+ I++  L +   H +T     +L A+ Y++  GGK++R  L+ E   LF
Sbjct: 9   AEMERRTKEIEQIIEPYLPEETGHQKT-----VLEAMNYSMKAGGKRLRPMLMQEVCRLF 63

Query: 66  NVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             + L   +   AA+E IH  SL+HDDLP MD+  +RRGKP+   +Y E   ++ G+ L+
Sbjct: 64  TGDVLDCVIPFMAAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTGDALM 123

Query: 125 TYAFEIISSP-KTQLKDNIRSQLMLS---LTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178
            YAFE  +   +T +  +  S +  S   L H  G  GM+GGQ +D++     I   ++ 
Sbjct: 124 MYAFETAARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPRDKLD 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            I ++KTGAL+  +   GA++  A++ + + +     ++G+ FQ+ DD+LD 
Sbjct: 184 FIYRLKTGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDV 235


>gi|83716251|ref|YP_438813.1| geranyltranstransferase [Burkholderia thailandensis E264]
 gi|167577162|ref|ZP_02370036.1| geranyltranstransferase [Burkholderia thailandensis TXDOH]
 gi|167615332|ref|ZP_02383967.1| geranyltranstransferase [Burkholderia thailandensis Bt4]
 gi|257141897|ref|ZP_05590159.1| geranyltranstransferase [Burkholderia thailandensis E264]
 gi|83650076|gb|ABC34140.1| geranyltranstransferase [Burkholderia thailandensis E264]
          Length = 294

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++T L   L       +T    +L  A+RYA+LGG K++R  L      L   +    
Sbjct: 12  ERVETALGHYL-----PAETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAAL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               +A+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  ++
Sbjct: 67  NAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALT 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMC 190
                L  + ++ L+  L    G  GM GGQ +D+    +  T+  +  + +MKTGAL+ 
Sbjct: 127 D-AAALPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLR 185

Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
            +   GA+      ++  R L  +   +G+ FQ+ DD+LD   D
Sbjct: 186 ASVRMGALAGETPSDDAMRALDAYAAAVGLAFQVVDDILDVTTD 229


>gi|13475328|ref|NP_106892.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
 gi|14026080|dbj|BAB52678.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
          Length = 321

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 16/241 (6%)

Query: 2   NGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
           +G LPS+  +Q+  +R++  L  LL       +      L++A+RYA L GGK+ R+ L 
Sbjct: 17  SGRLPSEIWMQDGVRRVEQALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLC 71

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               +L +        VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+
Sbjct: 72  LATGALADTPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAIL 131

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
            G+ L  +AF  ++S      DN R  L+  L   +  +G  GGQ +D+    + ++  +
Sbjct: 132 VGDALQAHAFLTLASLDAP-SDN-RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDR 189

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEE 232
           +  + +MK+GAL+  +   GA+ A A       L C    +    G+  Q+ DD+LD   
Sbjct: 190 IVAMHRMKSGALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATA 249

Query: 233 D 233
           D
Sbjct: 250 D 250


>gi|322412220|gb|EFY03128.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 290

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLIILEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPFKAAALVTEQTITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|310943001|pdb|3P8L|A Chain A, Crystal Structure Of Polyprenyl Synthase From Enterococcus
           Faecalis V583
 gi|310943002|pdb|3P8L|B Chain B, Crystal Structure Of Polyprenyl Synthase From Enterococcus
           Faecalis V583
          Length = 302

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 9/209 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           N+RL  A+ Y++  GGK++R  LV    + F     T   +V A++E IH YSLIHDDLP
Sbjct: 35  NERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLP 94

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H  + E TAI+AG+GLLT AF+++S  +  L + +   LM  L   
Sbjct: 95  AMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLGLSEKVL--LMQQLAKA 152

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G QGM+ GQM DI+ E +  T  ++  + + KTGAL+ FA  +G ++A+ ++     L 
Sbjct: 153 AGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLT 212

Query: 212 CFGENLGIIFQLADDLLDC---EEDLPKK 237
            F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 213 QFAHHYGLAFQIRDDLLDATSTEADLGKK 241


>gi|261416040|ref|YP_003249723.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 295

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 10/195 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY++  GGK++R  L      +F           +A+E +H +SLIHDDLP +D
Sbjct: 39  RLHEAMRYSMFAGGKRLRPGLAKATFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPCVD 98

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGK T H ++ E TA++AG+ L  +AFE++            ++ +  L H +G 
Sbjct: 99  NDDYRRGKLTSHKKFGEATAVMAGDALCIHAFEMMGKTGN-------AKAIELLAHLLGT 151

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GG+M DI+ E   +D   V  I   KT AL+  +   GA++A AS+ + E +R +G
Sbjct: 152 YGMIGGEMTDIECEGKTVDLEIVDYIHYHKTAALIEASLLVGAMLAKASEKDMEIIRNYG 211

Query: 215 ENLGIIFQLADDLLD 229
            ++G+ FQ+ DD+LD
Sbjct: 212 RSIGLAFQIVDDILD 226


>gi|218132228|ref|ZP_03461032.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992887|gb|EEC58887.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC
           43243]
          Length = 307

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 116/202 (57%), Gaps = 10/202 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV----GAAIECIHCYSLIHDDLPSMD 96
           A+ Y+++ GGK+IR  +++E   L   +   A +V     AA+E IH YSL+HDDLP+MD
Sbjct: 42  AMNYSVMAGGKRIRPLIMSEAYKLCGGSEECAAQVLHPFMAALEFIHTYSLVHDDLPAMD 101

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS---LTHN 153
           N   RRG+ T H  + E   I+AG+ LL YA+E +      + D  R + + +   +   
Sbjct: 102 NDMYRRGQLTTHAAFGEDMGILAGDALLNYAYETMLRAACDMTDTYRERSIRAASVIAGK 161

Query: 154 IGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G+ GM+GGQ LD++     ++  Q+  I ++KTGAL+  A  +GAI+A A      +L 
Sbjct: 162 AGIYGMVGGQTLDVKLTGMPMNAGQLDYIFRLKTGALIEAAFMAGAILAGAPDEVTAKLE 221

Query: 212 CFGENLGIIFQLADDLLDCEED 233
             G+ +G+ FQ+ DD+LD   D
Sbjct: 222 KAGDLVGVAFQIQDDILDVTGD 243


>gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
 gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
          Length = 294

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 109/205 (53%), Gaps = 15/205 (7%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     SP  Q      + L+  L 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDALSPVQQ------AALVRELA 144

Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-E 208
              G  GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+       E   
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLRAAVRMGALAGDTPSAETLA 204

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  +   +G+ FQ+ DD+LD   D
Sbjct: 205 ALDVYAAAVGLAFQVVDDILDVTTD 229


>gi|325265404|ref|ZP_08132128.1| geranyltranstransferase [Clostridium sp. D5]
 gi|324029405|gb|EGB90696.1| geranyltranstransferase [Clostridium sp. D5]
          Length = 296

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 11/200 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++ A+ YAL+ GGK++R  L+ E   LF           AAIE IH YSL+HDDLP+MDN
Sbjct: 32  IMEAMEYALMAGGKRLRPMLMQETYRLFGGCGTRIEPFMAAIEMIHTYSLVHDDLPAMDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLSLTH 152
              RRG+ T H+ Y E   I+ G+ LL  AFE  +      P+  L+     Q+   L  
Sbjct: 92  DDYRRGRKTTHVMYGEDIGILTGDALLNCAFETAAKAFDMEPEKSLQTGKALQI---LAG 148

Query: 153 NIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G+ GM+GGQ++D++   + I   ++  I K+KTGAL+  +   GA++A A++ +   +
Sbjct: 149 KAGIYGMIGGQVVDVKSTGDQISGEKLNFIYKLKTGALIEASMMIGAVLAGAAREQVNAV 208

Query: 211 RCFGENLGIIFQLADDLLDC 230
                 +G+ FQ+ DD+LD 
Sbjct: 209 EEIAGKVGLAFQIQDDILDV 228


>gi|292659743|pdb|3LLW|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori 26695
 gi|292659744|pdb|3LLW|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori 26695
 gi|292659745|pdb|3LLW|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori 26695
 gi|292659746|pdb|3LLW|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori 26695
          Length = 311

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 28  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 87

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 88  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 145

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 146 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASG 205

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 206 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 238


>gi|262375796|ref|ZP_06069028.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
 gi|262309399|gb|EEY90530.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
          Length = 302

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 115/204 (56%), Gaps = 7/204 (3%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    A+L  N N     R   AIE IHCYSL HDDLP 
Sbjct: 34  EPLRSAVHHAVMLGGKRVRPALCYATAALKPNQNSAAVRRAAVAIEFIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRG+PT H+ Y E TA++AG+ L + AFEI+ S        + + ++L     +
Sbjct: 94  MDNDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDQGPAVEASIVLKQMQIL 153

Query: 155 GLQG--MLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-EKER 209
                 M+ GQ+LD+Q E   ID+  +  I + KTGAL+  A    A+      +    +
Sbjct: 154 ATASSKMVNGQVLDLQSEGKKIDQQALETIHRNKTGALISAAIMMAAVTIFDGTDLAIPK 213

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           LR FG+ +G+ FQ+ DD+LD   D
Sbjct: 214 LREFGQAIGLAFQVQDDILDIISD 237


>gi|223038350|ref|ZP_03608644.1| geranyltranstransferase [Campylobacter rectus RM3267]
 gi|222880207|gb|EEF15294.1| geranyltranstransferase [Campylobacter rectus RM3267]
          Length = 659

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 116/195 (59%), Gaps = 6/195 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           A+ Y L  GGK  R+ LV    A++       A  V  A E +H YSLIHDDLP+MD+  
Sbjct: 405 ALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAAFHVALAFETMHSYSLIHDDLPAMDDSD 464

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+P++H+++DEVTAI+AG+ L T+AF  I+  +  L  + R + +  L+ N G+ GM
Sbjct: 465 LRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA--RAPLDADARIKCVEILSRNAGIYGM 522

Query: 160 LGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
             GQ +D   +++ +   ++  +   KT  L+  + ++G ++A   + E  R+   G +L
Sbjct: 523 ALGQAVDCYFENQKLGLEELKFLHIHKTARLIAASLQAGCVVAGLDETEAARIYDIGLDL 582

Query: 218 GIIFQLADDLLDCEE 232
           G+ FQ+ADD++D  +
Sbjct: 583 GLAFQIADDIIDATQ 597


>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 299

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 134/246 (54%), Gaps = 23/246 (9%)

Query: 5   LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +  KL+E    + K+++  L+ +L + +  +  Q       A+RY++  GGK++R  L  
Sbjct: 2   ISRKLEEYINLSQKKVEEHLEKILAERSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54

Query: 60  ECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  A
Sbjct: 55  LSYQMLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIA 114

Query: 117 IIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
           I+AG+ LL  A E+      +    K+ +++   L      G++GM+GGQ++DI +   D
Sbjct: 115 ILAGDALLNLAAEVCMDWILRYGCEKNLVKAAKYLFWAS--GVEGMIGGQVIDITNSGQD 172

Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              E  +F +   KT  L+  +C  GA++A A  +    +  FG+NLG+ FQ+ DD+LD 
Sbjct: 173 IKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDV 232

Query: 231 EEDLPK 236
             D  K
Sbjct: 233 IGDSKK 238


>gi|332523011|ref|ZP_08399263.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314275|gb|EGJ27260.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176]
          Length = 289

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 6/203 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           +++L++AIRY A  GGK+IR  L+ E    F+V    +   + AA+E IH  SLIHDDLP
Sbjct: 22  SEQLIAAIRYSAESGGKRIRPLLLLELLEAFSVTLTDSHYDIAAALEMIHTGSLIHDDLP 81

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG  T H ++DE TAI+AG+ L   AF +I+   T L  NI+  L+ SL+++
Sbjct: 82  AMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDAFALIAG--TNLSANIKVDLIESLSNS 139

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E  + T  ++  I   KTG L+ +   + A +A   +     + 
Sbjct: 140 SGTFGMVGGQMLDMKAEGQELTLAELQEIHSHKTGCLLAYPFWAAAKIAEVDEQILLEIY 199

Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
             G+ +G  FQ+ DD+LD   D 
Sbjct: 200 QAGQKVGHAFQVRDDILDVTADF 222


>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
          Length = 364

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A+RY++L GGK++R  L      L       A+    A+E IH  SLIHDD P MD
Sbjct: 99  KIHEAMRYSVLAGGKRVRPVLCIAACELVGGEESMAMPAACAVEMIHTMSLIHDDPPCMD 158

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E  A++AG+ LL ++FE ++     +      + +  L  +IG 
Sbjct: 159 NDDLRRGKPTNHKVFGEDIAVLAGDALLAFSFEHMTGSTVGVSPARIVRAVGELAKSIGS 218

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + +     +  I   KT AL+  +   GAI+   S  E E+LR F
Sbjct: 219 EGLVAGQVVDICSEGLTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKF 278

Query: 214 GENLGIIFQLADDLLD 229
              +G++FQ+ DD+LD
Sbjct: 279 ARCIGLLFQVVDDILD 294


>gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
 gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
          Length = 294

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 109/205 (53%), Gaps = 15/205 (7%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++     SP  Q      + L+  L 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDGDALSPVQQ------AALVRELA 144

Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-E 208
              G  GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+       E   
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLRAAVRMGALAGDPPSAETLA 204

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  +   +G+ FQ+ DD+LD   D
Sbjct: 205 ALDVYAGAVGLAFQVVDDILDVTTD 229


>gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
 gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
          Length = 295

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 132/224 (58%), Gaps = 10/224 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  L+ L     + +Q     RL  A+RY+++ GGK++R  LV       + N   A 
Sbjct: 12  RVDAALEPLFQPPRAELQ-----RLYEAMRYSVMNGGKRVRPLLVYAACEALDGNLDRAD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE +AI+AG+GL + AFE+++ 
Sbjct: 67  GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGLQSLAFEVLAD 126

Query: 134 PKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
            +   +D  +R Q++ +L+   G  GM+GGQ +D+    + +D+  +  + + KTGAL+ 
Sbjct: 127 RRRNPQDAEVRLQMIDALSSAAGPAGMVGGQAIDLGSVGQQLDQAALETMHRHKTGALIE 186

Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+ + +A +   + L  +   +G+ FQ+ DD+LD E D
Sbjct: 187 ASVLLGALASGNADELSLKALLQYARAVGLAFQVQDDILDVESD 230


>gi|42519419|ref|NP_965349.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533]
 gi|41583707|gb|AAS09315.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533]
          Length = 288

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 21/235 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLF 65
           KL++  ++    +D+ L +   H+ T+ ++   S I  Y+++ GGK++R  L    A+L 
Sbjct: 2   KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLF--LATLE 56

Query: 66  NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +NH      LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+G
Sbjct: 57  TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180
           LL    + I+           + L + ++  +G  GM+GGQ LDI     D  +    MI
Sbjct: 117 LLPLGIQWITEGSNS------AALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMI 170

Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +M   KTG L+  + +  AI A A+ +E  RL  F +  G  +Q+ DDL+D  E
Sbjct: 171 DQMEWLKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225


>gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 295

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  LD L       ++     RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALDGLFKAPGPELE-----RLYQAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHPTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ + HA Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230


>gi|317182228|dbj|BAJ60012.1| geranyltranstransferase [Helicobacter pylori F57]
          Length = 303

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H ++ H     +     L GGK+ R   FL   CA +    ++       ++   IEC+H
Sbjct: 26  HFESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALGIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|270263554|ref|ZP_06191823.1| geranyltranstransferase [Serratia odorifera 4Rx13]
 gi|270042438|gb|EFA15533.1| geranyltranstransferase [Serratia odorifera 4Rx13]
          Length = 306

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 123/200 (61%), Gaps = 11/200 (5%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMD 96
           +++A+R+ ALLGGK++R FLV     +F V+ L  L V  AA+ECIH YSLIHDDLP+MD
Sbjct: 39  MVAAMRHGALLGGKRLRPFLVYTTGQMFGVS-LNNLDVPAAAVECIHAYSLIHDDLPAMD 97

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHN 153
           +  +RRG+PT HI++ E +AI+AG+ L T AF I++    P   L+D  R  ++  L   
Sbjct: 98  DDDLRRGQPTCHIKFGEASAILAGDALQTLAFSILADADMPDVALRD--RLAMVSELATA 155

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210
            G  GM GGQ LD++ E   ID   + +I + KTGAL+  A   GA+ A    +    +L
Sbjct: 156 SGAAGMCGGQSLDLEAEGRQIDLPALELIHRHKTGALIRAAVRLGALAAGEPGRAALPQL 215

Query: 211 RCFGENLGIIFQLADDLLDC 230
             +   +G+ FQ+ DD+LD 
Sbjct: 216 DRYAAAIGLAFQVQDDILDV 235


>gi|19746452|ref|NP_607588.1| geranyltranstransferase [Streptococcus pyogenes MGAS8232]
 gi|306827052|ref|ZP_07460350.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782]
 gi|19748654|gb|AAL98087.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS8232]
 gi|304430798|gb|EFM33809.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782]
          Length = 290

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +  +Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLSQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|293400618|ref|ZP_06644763.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305644|gb|EFE46888.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 280

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 7/198 (3%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + ++  A++Y+L+ GGK+IR  ++      + +       V AAIE IH YSLIHDDLP+
Sbjct: 17  DSKVKDAMQYSLMAGGKRIRPQILLAALQCYGIEERVGYPVAAAIEMIHTYSLIHDDLPA 76

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKPT H+Q+DE TAI+AG+ LLT AF + +         +   ++ +L+   
Sbjct: 77  MDDDTLRRGKPTCHVQFDEATAILAGDALLTQAFLLGAMASEDAM--VNCAIVKALSRYA 134

Query: 155 GLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           G  GM+ GQ+ D++ E  ++    ++  I   KTG L+       A + H  + +     
Sbjct: 135 GADGMVLGQIKDLEGEVKEDLTLAELKDIHYYKTGRLLTLPLVCAAYLTH-HEEDIPAWE 193

Query: 212 CFGENLGIIFQLADDLLD 229
             G +LG+ FQ+ DD+LD
Sbjct: 194 QIGSDLGLSFQIQDDILD 211


>gi|308184713|ref|YP_003928846.1| geranyltranstransferase [Helicobacter pylori SJM180]
 gi|308060633|gb|ADO02529.1| geranyltranstransferase [Helicobacter pylori SJM180]
          Length = 303

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSVNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|268319202|ref|YP_003292858.1| geranyltranstransferase [Lactobacillus johnsonii FI9785]
 gi|262397577|emb|CAX66591.1| geranyltranstransferase [Lactobacillus johnsonii FI9785]
          Length = 288

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 21/235 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLF 65
           KL++  ++    +D+ L +   H+ T+ ++   S I  Y+++ GGK++R  L    A+L 
Sbjct: 2   KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLF--LATLE 56

Query: 66  NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +NH      LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+G
Sbjct: 57  TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180
           LL    + I+           + L + ++  +G  GM+GGQ LDI     D  +    MI
Sbjct: 117 LLPLGIQWITEGSNS------AALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMI 170

Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +M   KTG L+  + +  AI A A+ +E  RL  F +  G  +Q+ DDL+D  E
Sbjct: 171 DQMEWLKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225


>gi|224418966|ref|ZP_03656972.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
           98-5491]
 gi|253827914|ref|ZP_04870799.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491]
 gi|313142478|ref|ZP_07804671.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
           98-5491]
 gi|253511320|gb|EES89979.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491]
 gi|313131509|gb|EFR49126.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
           98-5491]
          Length = 288

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 5/190 (2%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           L GGK+ R  L+            + A     A+E +H YSLIHDDLP+MDN  +RRG P
Sbjct: 39  LSGGKRFRPKLLLSVVYANKAKFASKAFAPALALEILHTYSLIHDDLPAMDNALLRRGVP 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+H +YDE  AI+ G+GL T++F  I+  K++LK  I+++L+  L++N G+ GM+ GQ L
Sbjct: 99  TLHHKYDECGAILVGDGLNTHSFYCIA--KSKLKPKIKNKLIEILSYNGGIHGMVLGQAL 156

Query: 166 D--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D   + + +   ++  I   KT  L+  A + G I+A   +   ++L   G +LG+ FQ+
Sbjct: 157 DCYFEKQTLPLEKLRTIHLNKTAKLIAAALQMGGIIAKCDKKFCQKLYKIGLDLGLFFQI 216

Query: 224 ADDLLDCEED 233
            DD++D  + 
Sbjct: 217 RDDIIDATQS 226


>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
 gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
          Length = 302

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 104/177 (58%), Gaps = 15/177 (8%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL V  AIE IH YSL+HDDLP+MDN   RRGK T H  + E  AI+AG+ LLT+AF +I
Sbjct: 71  ALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALLTHAFHLI 130

Query: 132 SSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE----FIDETQVFMIQKM 183
             PK      I +++ L +  ++    G +GM+GGQ  D+Q E     I+E +   +   
Sbjct: 131 --PKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGITSIEELEYIHLH-- 186

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           KT  L+ F+  +G  +  AS  + E LR +G N+G+ FQ+ DD+LD    E+ L KK
Sbjct: 187 KTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIGDEKKLGKK 243


>gi|89255952|ref|YP_513314.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314435|ref|YP_763158.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|167009142|ref|ZP_02274073.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|169656540|ref|YP_001428011.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|254367309|ref|ZP_04983335.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           257]
 gi|254368783|ref|ZP_04984796.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954603|ref|ZP_06559224.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295311946|ref|ZP_06802770.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89143783|emb|CAJ78986.1| Geranyltranstransferase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129334|gb|ABI82521.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253125|gb|EBA52219.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           257]
 gi|157121704|gb|EDO65874.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551608|gb|ABU61055.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 293

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 109/198 (55%), Gaps = 11/198 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LLSA+ Y+   GGK+IR+  V        ++     ++  A+E IH YSLIHDDLP+MDN
Sbjct: 28  LLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDN 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT HI+++E TAI+AG+ L   AFEI+        D ++    L      G  
Sbjct: 88  DTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKL-FAQYCGAS 146

Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLR 211
           GM+GGQ LDI+ E     I+E Q+  I K    A M  AC     +   +QN +  + L 
Sbjct: 147 GMVGGQQLDIEGENKKLKIEELQILHINKT---AKMFRACIVLPYILSQNQNSQIEDLLV 203

Query: 212 CFGENLGIIFQLADDLLD 229
              + +G+ FQ+ DD+LD
Sbjct: 204 RLSDLIGLCFQIKDDILD 221


>gi|302872147|ref|YP_003840783.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 299

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 23/246 (9%)

Query: 5   LPSKLQE----NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +  KL+E    + K ++  LD +L + +  +  Q       A+RY++  GGK++R  L  
Sbjct: 2   ISRKLEEYINLSQKNVEEHLDKILKEKSPEIIYQ-------AMRYSVFAGGKRLRPLLCL 54

Query: 60  ECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  A
Sbjct: 55  LSYQMVSKDKEIDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIA 114

Query: 117 IIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
           I+AG+ LL  A E+  +        K+ +++   L      G++GM+GGQ++DI +   D
Sbjct: 115 ILAGDALLNLAAEVCLNWILNYGCEKNLVKAAKYLFWAS--GVEGMIGGQVIDITNSGQD 172

Query: 174 ---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              E  +F +   KT  L+  +C  GA++A A  +    L  +G+NLG+ FQ+ DD+LD 
Sbjct: 173 IKSEELLFEMHLKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDV 232

Query: 231 EEDLPK 236
             D  K
Sbjct: 233 IGDSKK 238


>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
           12885]
 gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
           12885]
          Length = 308

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 8/204 (3%)

Query: 38  RLLSAIRY-ALLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           R+  A+RY AL GGK +R  LV     C            R  AA+E +H YSLIHDDLP
Sbjct: 40  RIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVELVHTYSLIHDDLP 99

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+P  H+ + E  AI+AG+ LLT AFE+++  P+      +   +   L  
Sbjct: 100 AMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALAVAEELAR 159

Query: 153 NIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             G  G++GGQ+ D   +Q   +D  ++  I + KTGAL       GA +A A + E E 
Sbjct: 160 AAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGARLAGAGEGELEA 219

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +    G  FQ+ DD+LD   D
Sbjct: 220 LTAYATAFGEAFQIVDDILDVTGD 243


>gi|26246427|ref|NP_752466.1| geranyltranstransferase [Escherichia coli CFT073]
 gi|227884571|ref|ZP_04002376.1| geranyltranstransferase [Escherichia coli 83972]
 gi|300988027|ref|ZP_07178507.1| polyprenyl synthetase [Escherichia coli MS 45-1]
 gi|301049622|ref|ZP_07196573.1| polyprenyl synthetase [Escherichia coli MS 185-1]
 gi|26106825|gb|AAN79010.1|AE016756_193 Geranyltranstransferase [Escherichia coli CFT073]
 gi|227838657|gb|EEJ49123.1| geranyltranstransferase [Escherichia coli 83972]
 gi|300298615|gb|EFJ55000.1| polyprenyl synthetase [Escherichia coli MS 185-1]
 gi|300407579|gb|EFJ91117.1| polyprenyl synthetase [Escherichia coli MS 45-1]
 gi|307552326|gb|ADN45101.1| geranyltranstransferase [Escherichia coli ABU 83972]
 gi|315294200|gb|EFU53551.1| polyprenyl synthetase [Escherichia coli MS 153-1]
          Length = 299

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSINTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+ A    +N    
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRNALPV 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231


>gi|295093395|emb|CBK82486.1| Geranylgeranyl pyrophosphate synthase [Coprococcus sp. ART55/1]
          Length = 294

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 123/226 (54%), Gaps = 9/226 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + E + RI+ I++  L       +T     +  A+ Y++  GGK++R  L+ E   LF  
Sbjct: 6   IAEKAARINDIVESYLPPADGFNRT-----VCEAMAYSVEAGGKRLRPMLMEETYRLFGG 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AAIE IH YSLIHDDLP++DN   RRG+ T H+ + E  AI+AG+ LL YA
Sbjct: 61  KSEVIKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRKTSHVVFGEAMAILAGDALLNYA 120

Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           +E         +D +  +  M  L    G+ GM+GGQ++D++   + + + Q+  + + K
Sbjct: 121 YETACKAFGMGEDIHAVASAMCVLAQKPGINGMIGGQVVDVEMTGKELSKEQLEYVYENK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           TGAL+  +   GAI+A A + +   +     ++G+ FQ+ DD+LD 
Sbjct: 181 TGALIEASMMIGAILAGADEAKVAAVHKIASDVGMAFQIQDDILDV 226


>gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
          Length = 294

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++T L   L       +T    +L  A+RYA+LGG K++R  L      L   +    
Sbjct: 12  ERVETALGHYL-----PAETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGELTGASEAAL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               +A+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  ++
Sbjct: 67  NAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAFVALT 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMC 190
                L  + ++ L+  L    G  GM GGQ +D+    +  T+  +  + +MKTGAL+ 
Sbjct: 127 D-AAALPADRQAALVCELALASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLR 185

Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
            +   GA+       +  R L  +   +G+ FQ+ DD+LD   D
Sbjct: 186 ASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTD 229


>gi|320103326|ref|YP_004178917.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644]
 gi|319750608|gb|ADV62368.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644]
          Length = 336

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 124/237 (52%), Gaps = 17/237 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHN-----DRLLSAIRYALLGGKKI-RSFLVTECASLFNV 67
           +RI+T LD LL     H            RL  A RY+ LGG K+ R  L    A     
Sbjct: 41  QRIETALDALLPPVEEHPNAAGPYGVCPARLARAARYSTLGGGKLLRPKLTLLAAEAVGG 100

Query: 68  NHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +     AL    A+E +H YSL+HDDLP+MD+  +RRG+PT H+++DE TAI+AG+GLLT
Sbjct: 101 DDAIENALAAACAVELVHAYSLVHDDLPAMDDDDLRRGRPTTHVEFDEATAILAGDGLLT 160

Query: 126 YAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179
            AF  + +    ++   R+   +  L    G +GM+GGQM D+Q E I   Q     +  
Sbjct: 161 LAFGAVVA---GVRPAERAAACVGILAEAAGFRGMVGGQMADLQAESIPREQGSVELLEA 217

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTGAL+  +   GA  + A+      L  +G  LG+ FQ+ DDLLD   D  K
Sbjct: 218 IHLRKTGALLRASLTMGAAASGANAELTTALDEYGRALGLAFQIQDDLLDATGDPAK 274


>gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44]
 gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44]
          Length = 292

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 4/199 (2%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q  ++L  ++ Y+L+ GGK+IR  L      + +           A+ECIH YSL+HDDL
Sbjct: 26  QEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDL 85

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN   RRG  T H  Y E  AI+AG+GLLTYAF++++S  T      +   +  +  
Sbjct: 86  PAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTS-NTVASAQQKLDAIQCVAT 144

Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+GGQ  D+  +D+ I   ++ ++   KTGAL   + E G I+  A+   +  L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGCANNTTRTFL 204

Query: 211 RCFGENLGIIFQLADDLLD 229
             +   LG++FQ+ DD+LD
Sbjct: 205 MEYSNCLGLLFQITDDILD 223


>gi|108563335|ref|YP_627651.1| geranyltranstransferase [Helicobacter pylori HPAG1]
 gi|107837108|gb|ABF84977.1| geranyltranstransferase [Helicobacter pylori HPAG1]
          Length = 303

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG   G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236


>gi|322378507|ref|ZP_08052957.1| geranyltranstransferase [Helicobacter suis HS1]
 gi|321149068|gb|EFX43518.1| geranyltranstransferase [Helicobacter suis HS1]
          Length = 296

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 11/190 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+ R  L+    S F  +HL    A  +  A+E +H YSLIHDDLP MDN  +RR  P
Sbjct: 45  GGKRFRPKLLLAVLSSFMRSHLMIKNAFPIALALEVLHTYSLIHDDLPCMDNAPLRRYHP 104

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+H+ Y    A + G+GL TYAFE++SS   +L + ++  L+ +L H  G+ GM+ GQ +
Sbjct: 105 TLHVSYGVTVATLVGDGLNTYAFELLSS--ARLPNALKVSLISTLAHCGGVFGMVLGQAI 162

Query: 166 D--IQDEFIDETQVFMIQKMKTGALMCFACESGAIM----AHASQNEKERLRCFGENLGI 219
           D   + + +   Q+ ++  +KT  L+  + + GA++    A    N    L  FG  LG+
Sbjct: 163 DCYFEHKPLLREQLEILHTLKTAKLIAASLKMGALIAKKYARTPTNLPTTLFNFGLKLGL 222

Query: 220 IFQLADDLLD 229
            FQ+ DD++D
Sbjct: 223 FFQVRDDIID 232


>gi|58337602|ref|YP_194187.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus
           acidophilus NCFM]
 gi|227904242|ref|ZP_04022047.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796]
 gi|58254919|gb|AAV43156.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus
           acidophilus NCFM]
 gi|227867890|gb|EEJ75311.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796]
          Length = 289

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 19/223 (8%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRS--FLVTECASLFNVNHLTALR 74
           ++D+ L   A H+ ++ +D+ +S I  Y+++ GGK++R   FL T  A    +   + +R
Sbjct: 14  VIDNYL---AKHLASEIDDQKISQIMSYSVMAGGKRLRPLLFLATLNALGKKIEE-SEIR 69

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+  
Sbjct: 70  LACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGVQWIAEG 129

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKTGALM 189
                    S+L++ +T  IG  GM+GGQ LDI          DE  +  ++ +KTG L+
Sbjct: 130 SNS------SELVIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINKMEWLKTGCLI 183

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 184 QASVEMAAVYAKASDIEQVKLVDFAKTFGRSYQIYDDLVDVVE 226


>gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
 gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
          Length = 301

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 131/230 (56%), Gaps = 17/230 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  L+D L Q  +       D L  A+RY+L  GGK++R  LV   A LF+ ++    
Sbjct: 13  RVDRYLNDQLTQYDA------ADYLHEAMRYSLFNGGKRVRPMLVYATAELFSESNRLTD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              AAIE IH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ L T+AFE++S+
Sbjct: 67  ASAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILTGDALQTFAFELLSA 126

Query: 134 PKTQL-KDNIRS------QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
              ++  DN+        +L+ SL+   G  GM+ GQM+D+   D  I    +  + + K
Sbjct: 127 SYNEIDTDNLADCKTRQLRLIRSLSRASGRFGMVTGQMIDLNNVDRSITLETLEKMHQHK 186

Query: 185 TGALMCFACESGA-IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+  +   GA  +    Q    +L  +   +G+ FQ+ DD++D   D
Sbjct: 187 TGALIRASVLMGAQSVGIEDQKILSQLDKYASAIGLAFQVQDDIIDITSD 236


>gi|317012738|gb|ADU83346.1| geranyltranstransferase IspA [Helicobacter pylori Lithuania75]
          Length = 303

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 123/214 (57%), Gaps = 13/214 (6%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   C+ +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+  I 
Sbjct: 86  TYSLIHDDLPCMDNATLRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESPII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G ++A 
Sbjct: 144 VELVKILSTNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202

Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
             +NE+  + L+ FG   G+ FQ+ DD++D  +D
Sbjct: 203 GIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236


>gi|271499581|ref|YP_003332606.1| polyprenyl synthetase [Dickeya dadantii Ech586]
 gi|270343136|gb|ACZ75901.1| Polyprenyl synthetase [Dickeya dadantii Ech586]
          Length = 303

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 130/234 (55%), Gaps = 16/234 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L  + +RID  L+  +    S +  Q +  + +    ALLGGK++R FLV     LF V
Sbjct: 7   QLAAHHQRIDAALNHFI----STLPFQSSPLVEAMAHGALLGGKRLRPFLVYTTGQLFAV 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +  +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ L T A
Sbjct: 63  SPDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQTLA 122

Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F I++ +P   + D  R  ++  L    G+ GM GGQ LD+  E   +D   +  I + K
Sbjct: 123 FSILADAPMPHVSDRDRLAMISELASASGVAGMCGGQALDLAAEGHQVDLQTLERIHRHK 182

Query: 185 TGALMCFACESGAIMAHASQNEKERLRC-----FGENLGIIFQLADDLLDCEED 233
           TGAL+  +   GA+ A     E+ RL       +   +G+ FQ+ DD+LD   D
Sbjct: 183 TGALIRASVRLGALAA----GERGRLALPYLDRYANAVGLAFQVQDDILDVIGD 232


>gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619]
 gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619]
          Length = 295

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 127/227 (55%), Gaps = 10/227 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           +  R+D  L+ L +       T+  +RL +A+RY+++ GGK++R  L             
Sbjct: 9   SQARVDAALEPLFIAP-----TKELERLYAAMRYSVMNGGKRVRPLLAYAACQALGAPAE 63

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  
Sbjct: 64  QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSA 123

Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187
           +  P+ +   D IR  ++ +L    G  GM+ GQ +D+    +  D+  +  + + KTGA
Sbjct: 124 LLDPRLSPQPDAIRLAMVQALAKAAGPAGMVAGQAIDLGSVGVKLDQQALEFMHRHKTGA 183

Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  +   GA+ +  A Q + + L+ + + +G+ FQ+ DD+LD E D
Sbjct: 184 LIEASVRLGALASGRAEQAQLDALQTYAQAIGLAFQVQDDILDVESD 230


>gi|118475576|ref|YP_891278.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414802|gb|ABK83222.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40]
          Length = 277

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 120/215 (55%), Gaps = 8/215 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIE 80
           +L L          ND L   ++    GGK  R+ L+         +  +A   V AA+E
Sbjct: 8   ELNLPKVDSFHPHFNDSLSWVLK---AGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVE 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H YSLIHDDLP MDN  +RRG  T+H++YDEV+A++AG+ L T+AF ++SS    L  
Sbjct: 65  MLHTYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHAFYMLSS--ANLPA 122

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
               + + +L  N G+ GM+ GQ +D   +++ ++  ++  +   KTGAL+  + + GAI
Sbjct: 123 EAVVKCVQTLAENGGIYGMVIGQAIDCYFENKHLNLDELKFLHLHKTGALIAASMKMGAI 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++  S  + E++   G  LG+ FQ+ DD++D   D
Sbjct: 183 ISAQSDKQCEKIYNIGLKLGLAFQIHDDIIDATSD 217


>gi|307637619|gb|ADN80069.1| Octa prenyl-diphosphate synthase/Dimethyl allyl transferase/Geranyl
           trans transferase /farnesyl diphosphate synthase/Geranyl
           geranyl pyrophosphate synthetase [Helicobacter pylori
           908]
 gi|325996213|gb|ADZ51618.1| Octaprenyl-diphosphate
           synthase/Dimethylallyltransferase/Geranyltranstransferas
           e/farnesyldiphosphate synthase/Geranylgeranyl
           pyrophosphate synthetase [Helicobacter pylori 2018]
 gi|325997807|gb|ADZ50015.1| Geranyltranstransferase [Helicobacter pylori 2017]
          Length = 303

 Score =  121 bits (303), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 115/194 (59%), Gaps = 11/194 (5%)

Query: 49  GGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK+ R   FL   CA +    ++       ++  +IEC+H YSLIHDDLP MDN  +RR
Sbjct: 45  GGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNASLRR 104

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
             PT+H +YDE TA++ G+ L TY+FE++S+  + L+  I  +L+  L+ N G++GM+ G
Sbjct: 105 NHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESRIIVELVKILSANGGIKGMILG 162

Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGI 219
           Q LD   ++  ++  Q+  + + KT  L+  +   G + +  +  E  + L+ FG  +G+
Sbjct: 163 QALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGL 222

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD++D  +D
Sbjct: 223 CFQVLDDIIDVTQD 236


>gi|83746515|ref|ZP_00943566.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
           pyrophosphate synthetase [Ralstonia solanacearum UW551]
 gi|207743826|ref|YP_002260218.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Ralstonia solanacearum IPO1609]
 gi|83726846|gb|EAP73973.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
           pyrophosphate synthetase [Ralstonia solanacearum UW551]
 gi|206595226|emb|CAQ62153.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Ralstonia solanacearum IPO1609]
          Length = 299

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 14/204 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+RYA LG GK++R  LV    +L   +     RV  A+E IH YSL+HDD+P MD
Sbjct: 32  RLHAAMRYATLGAGKRVRPLLVHAAGALGEASPEALDRVSCAVEMIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151
           +  +RRG+PTVH  YDE TA++ G+ L T AF +++     SP T      R+ L+  L 
Sbjct: 92  DDDLRRGRPTVHRAYDEATALLVGDALQTQAFVVLAELGAVSPVT------RAALVGELA 145

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM GGQ +D+Q   +  +Q  +  + +MKTGAL+  +   GA+ A  +    E+
Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  +   +G+ FQ+ DD+LD   D
Sbjct: 206 VDAYAGAVGLAFQVVDDILDVTAD 229


>gi|308062245|gb|ADO04133.1| geranyltranstransferase [Helicobacter pylori Cuz20]
          Length = 303

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNRQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQD 236


>gi|329667056|gb|AEB93004.1| geranyltranstransferase [Lactobacillus johnsonii DPC 6026]
          Length = 288

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 126/235 (53%), Gaps = 21/235 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLF 65
           KL++  ++    +D+ L +   H+ T+ ++   S I  Y+++ GGK++R  L    A+L 
Sbjct: 2   KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLF--LATLE 56

Query: 66  NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +NH      LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+G
Sbjct: 57  TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180
           LL    + I+           + L + ++  +G  GM+GGQ LDI     D  +    MI
Sbjct: 117 LLPLGIQWITEGSNS------AALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMI 170

Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +M   KTG L+  +    AI A A+ +E  RL  F +  G  +Q+ DDL+D  E
Sbjct: 171 DQMEWLKTGCLIEASVRMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225


>gi|194432565|ref|ZP_03064851.1| geranyltranstransferase [Shigella dysenteriae 1012]
 gi|194419126|gb|EDX35209.1| geranyltranstransferase [Shigella dysenteriae 1012]
 gi|332086043|gb|EGI91207.1| geranyltranstransferase [Shigella dysenteriae 155-74]
 gi|332094575|gb|EGI99621.1| geranyltranstransferase [Shigella boydii 5216-82]
          Length = 299

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S S   ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDSDMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|283781730|ref|YP_003372485.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
 gi|283440183|gb|ADB18625.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
          Length = 296

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 6/230 (2%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
           +  +E SK + + +DD L+ T  +        L  AIR++LL   K++R  LV       
Sbjct: 5   ADFRELSKTLRSEVDDALVATTEY-GPDVPTHLAEAIRHSLLAPAKRLRPLLVLIACEAC 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   A+    A+E IH YSLIHDDLP+MD+  +RRG+P+ H ++ E T I+AG+ LL 
Sbjct: 64  GYDRSKAMPAAVAVELIHTYSLIHDDLPAMDDDDMRRGRPSCHAKFGESTGILAGDALLA 123

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKM 183
            AFE++++    L   + ++ +  L    G   ++GGQ  D+  EF D     +  I + 
Sbjct: 124 QAFEVLAA--DHLPGPVVAKCVKELAVAAGAANLVGGQHDDLGAEFADLGLASLEAIHRR 181

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGA++C +   GAI+A AS      L  +GE LG+ FQ+ DDLLD E D
Sbjct: 182 KTGAMICVSLRLGAIIAGASSEVLTALSQYGERLGLAFQIVDDLLDLEGD 231


>gi|51595290|ref|YP_069481.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 32953]
 gi|153948033|ref|YP_001402071.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758]
 gi|186894307|ref|YP_001871419.1| geranyltranstransferase [Yersinia pseudotuberculosis PB1/+]
 gi|51588572|emb|CAH20180.1| geranyltranstransferase (farnesyldiphosphate synthase) [Yersinia
           pseudotuberculosis IP 32953]
 gi|152959528|gb|ABS46989.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758]
 gi|186697333|gb|ACC87962.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 306

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 119/203 (58%), Gaps = 5/203 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L+ A+RY A++GGK++R +LV     +F ++        AAIECIH YSLIHDDLP+
Sbjct: 36  NSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPA 95

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT H+++ E  AI+AG+ L T AF I++ +P   + D  R  +++ L   
Sbjct: 96  MDDDDLRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQA 155

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210
            G  GM  GQ LD++ E   +    +  I + KTGAL+  A   GA+ A  A +     L
Sbjct: 156 SGAAGMCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGALAAGEAGRKTLLSL 215

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             + E +G+ FQ+ DD+LD   D
Sbjct: 216 DRYAEAIGLAFQVQDDILDVIGD 238


>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 295

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  LD L       ++     RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALDGLFKAPGPELE-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ + HA Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230


>gi|160871987|ref|ZP_02062119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Rickettsiella grylli]
 gi|159120786|gb|EDP46124.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Rickettsiella grylli]
          Length = 294

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 9/199 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ YA+L GGK++R   V    ++  ++      +  AIE IH YSLIHDDLP MDN
Sbjct: 30  LYDAMIYAVLNGGKRLRPLYVYTLGNVLGLSLQDLDHIACAIEFIHAYSLIHDDLPCMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGL 156
              RRGKP+ H Q+ E  A++AG+ L   AF+ ++ +P   LK     +++  LT  +G 
Sbjct: 90  DDWRRGKPSCHKQFGEAMALLAGDALQALAFDTLLKAPFQSLK---VIKMLSVLTEAVGA 146

Query: 157 QGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           QGM+ GQ +D +D       D +    I  +KTG+L   A +  AI A   Q+    L+ 
Sbjct: 147 QGMVAGQAMDFKDFNALGRSDRSNAENIHALKTGSLFGAAFQLPAIAADLPQDHSLTLKN 206

Query: 213 FGENLGIIFQLADDLLDCE 231
            G  +G++FQ+ DD+ D E
Sbjct: 207 VGHQVGLVFQIQDDICDDE 225


>gi|20803894|emb|CAD31472.1| PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN [Mesorhizobium loti
           R7A]
          Length = 324

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 16/241 (6%)

Query: 2   NGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
           +G LP +  +Q+ ++R++  L  LL       +      L++A+RYA L GGK+ R+ L 
Sbjct: 20  SGRLPPEIWMQDGARRVEQALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLC 74

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               +L +        VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+
Sbjct: 75  LATGALADTPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAIL 134

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
            G+ L  +AF  ++S      DN R  L+  L   +  +G  GGQ +D+    + ++  +
Sbjct: 135 VGDALQAHAFLTLASLDAP-GDN-RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDR 192

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEE 232
           +  + +MK+GAL+  +   GA+ A A       L C    +    G+  Q+ DD+LD   
Sbjct: 193 IVAMHRMKSGALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATA 252

Query: 233 D 233
           D
Sbjct: 253 D 253


>gi|94990756|ref|YP_598856.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus
           pyogenes MGAS10270]
 gi|94544264|gb|ABF34312.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           pyogenes MGAS10270]
          Length = 290

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|63254579|gb|AAY35675.1| Polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 295

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  LD L       ++     RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALDGLFKAPGPELE-----RLYQAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ + HA Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230


>gi|320528396|ref|ZP_08029558.1| putative geranyltranstransferase [Solobacterium moorei F0204]
 gi|320131310|gb|EFW23878.1| putative geranyltranstransferase [Solobacterium moorei F0204]
          Length = 278

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/194 (39%), Positives = 110/194 (56%), Gaps = 6/194 (3%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           SA+ Y+L  GGK+IR  L+      ++V+         A+E IH YSLIHDDLP+MDN  
Sbjct: 21  SAMLYSLTAGGKRIRPQLLYTVLKGYSVDPEIGNPFACALEMIHTYSLIHDDLPAMDNDD 80

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PT H Q++E TAI+AG+GLLTYAFEI +         ++   +LS     G  GM
Sbjct: 81  LRRGLPTCHKQFNEATAILAGDGLLTYAFEIAAGSNENSGTVLKCISILS--KMAGPSGM 138

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQ LD++ E+  ID   +  I + KTG L+         +A   + +    +  G +L
Sbjct: 139 VYGQQLDLEAEYKEIDWDMLQRIHEHKTGCLLTAPLLIACTLAK-HEEDISAWKKIGFSL 197

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ DD+LD E
Sbjct: 198 GLAFQIQDDILDIE 211


>gi|227890284|ref|ZP_04008089.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200]
 gi|227849098|gb|EEJ59184.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200]
          Length = 288

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 21/235 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLF 65
           KL++  ++    +D+ L +   H+ T+ ++   S I  Y+++ GGK++R  L    A+L 
Sbjct: 2   KLKDFQEKYTPQIDNFLKE---HLVTEIDNLTFSKIMSYSVMAGGKRLRPLLF--LATLE 56

Query: 66  NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +NH      LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+G
Sbjct: 57  TLNHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDG 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMI 180
           LL    + I+           + L + ++  +G  GM+GGQ LDI     D  +    MI
Sbjct: 117 LLPLGIQWITEGSNS------AALAIVISQAVGPNGMVGGQYLDIDTTNNDSAKENAKMI 170

Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +M   KTG L+  + +  AI A A+ +E  RL  F +  G  +Q+ DDL+D  E
Sbjct: 171 DQMEWLKTGCLIEASVKMAAIYAGATDSEFNRLDNFSKRFGRSYQIYDDLVDVVE 225


>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
 gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
          Length = 311

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 114/195 (58%), Gaps = 4/195 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV   +         ALR   A+E IH YSL+HDD+P MDN  +
Sbjct: 52  AMRYAVLDGGKRLRPLLVLAASHAVGGQPEAALRAACAVELIHAYSLVHDDMPCMDNDVM 111

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+++ E  A++AG+ L   AFE++ +P+  +   ++++L   L    G  GM 
Sbjct: 112 RRGKPTVHVRFGEARALLAGDALQALAFELL-TPEDGVPLAMQARLCRELAQAAGAAGMA 170

Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ +D+      + E Q+  +  +KTGAL+  +   GA+    +    + L  +G  +G
Sbjct: 171 GGQAIDLASVGLQLSEDQLRHMHSLKTGALLQASVVMGAVCGQPTGAALQALTDYGAAMG 230

Query: 219 IIFQLADDLLDCEED 233
           + FQ+ DD+LD  +D
Sbjct: 231 LAFQVVDDVLDVTQD 245


>gi|50914597|ref|YP_060569.1| dimethylallyltransferase [Streptococcus pyogenes MGAS10394]
 gi|50903671|gb|AAT87386.1| Dimethylallyltransferase [Streptococcus pyogenes MGAS10394]
          Length = 290

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|331002440|ref|ZP_08325958.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410256|gb|EGG89690.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 296

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 17/235 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +E  K+ID+I++        + +   N ++++A   A+  GGK++R  ++ E        
Sbjct: 3   KEKIKKIDSIIESFF-----YAEDGLNKKVITASNEAIKNGGKRLRPLIMFEIYRAVAGE 57

Query: 69  HLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 +    AAIE IH +SLIHDDLP+MDN  +RRGKPT  + Y E  AI+AG+ L  
Sbjct: 58  EYREEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLCV 117

Query: 126 YAFEIISSPKTQLKDNIR-----SQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178
            AFEIIS  K Q  D+I      S+ + +L +  G  GM+GGQ +D++   + + E  + 
Sbjct: 118 QAFEIISK-KMQDVDDINILKRMSKALYTLANATGALGMIGGQCVDVEYCGKRMSEDVLR 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              ++KTGAL+  +   G I+A A+  E   L+  G  +G  FQ+ DD LD   D
Sbjct: 177 YTYELKTGALLQASFVIGGILAGANDKETRLLKKAGSYIGEAFQIRDDYLDIVAD 231


>gi|71903832|ref|YP_280635.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180]
 gi|94994734|ref|YP_602832.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           pyogenes MGAS10750]
 gi|71802927|gb|AAX72280.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180]
 gi|94548242|gb|ABF38288.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           pyogenes MGAS10750]
          Length = 290

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|169824537|ref|YP_001692148.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328]
 gi|167831342|dbj|BAG08258.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328]
          Length = 269

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 6/202 (2%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           ND++  A++Y L+  G K++R  L      +FN +    +    +IE IH YSL+HDDL 
Sbjct: 21  NDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYSLVHDDLE 80

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN   RRGK TVH +Y E  A++ G+ LL Y+FE++S     +K+ + +     +   
Sbjct: 81  CMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSES---IKNEVDAMCANYIVKK 137

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            G  GM+ GQ+LDI D  I E  +  I   KT  L+  +  S  I++        +L  +
Sbjct: 138 SGCFGMIRGQLLDI-DSKISEDNIIEIYDKKTCNLLKASTVSAGILSKVDHTTLLKLENY 196

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
             NLG+ FQ+ DD++D E D+ 
Sbjct: 197 AFNLGMAFQIIDDIMDYENDIK 218


>gi|330899928|gb|EGH31347.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 281

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  LD L       ++     RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALDGLFKAPGPELE-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ + HA Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230


>gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 295

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  LD L       ++     RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALDGLFKAPGPELE-----RLYQAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLTPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ + HA Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230


>gi|293408568|ref|ZP_06652407.1| geranyltranstransferase [Escherichia coli B354]
 gi|291471746|gb|EFF14229.1| geranyltranstransferase [Escherichia coli B354]
          Length = 299

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 17/210 (8%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSL 150
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S    PK   +D I   ++  L
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPKVSDRDRI--SMISEL 145

Query: 151 THNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K 
Sbjct: 146 ASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKG 201

Query: 209 R-----LRCFGENLGIIFQLADDLLDCEED 233
           R     L  + E++G+ FQ+ DD+LD   D
Sbjct: 202 RRALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4]
 gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4]
 gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1]
          Length = 299

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 122/196 (62%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL SA+ Y+LL GGK++R  L    A +  ++ ++ +   AAIE IH YSLIHDDLP+MD
Sbjct: 34  RLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+P+ H Q+DE TAI+AG+GLLT AF++++S    +        +  ++   G 
Sbjct: 94  DDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGS 153

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            GM+GGQ LD+     + ID   +  +  MKTGAL+  +C +GA++  A  +  E++  +
Sbjct: 154 SGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVAGALLGGAPASAVEQVAGY 213

Query: 214 GENLGIIFQLADDLLD 229
           G  +G  FQ+ DD+LD
Sbjct: 214 GAAIGAAFQIVDDILD 229


>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 299

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 130/235 (55%), Gaps = 19/235 (8%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-- 68
           + K+I+  L+ +L + +  +  Q       A+RY++  GGK++R  L      + + +  
Sbjct: 13  SQKKIEEHLEKILKERSPEIIYQ-------AMRYSVFAGGKRLRPLLCLLSYQMLSKDQE 65

Query: 69  -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +   L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+AG+ LL  A
Sbjct: 66  INQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILAGDALLNLA 125

Query: 128 FEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQ 181
            E+      +    K+ +++   L      G++GM+GGQ++DI +   D   E  +F + 
Sbjct: 126 AEVCMDWILRYGCDKNLVKAAKYLFWAS--GVEGMIGGQVIDITNSGQDIKSEELLFEMH 183

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KT  L+  +C  GA++A A  +    L  +G+NLG+ FQ+ DD+LD   D  K
Sbjct: 184 LKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKK 238


>gi|302380702|ref|ZP_07269167.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3]
 gi|302311645|gb|EFK93661.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3]
          Length = 269

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 6/202 (2%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           ND++  A++Y L+  G K++R  L      +FN +    +    +IE IH YSL+HDDL 
Sbjct: 21  NDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYSLVHDDLE 80

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN   RRGK TVH +Y E  A++ G+ LL Y+FE++S     +K+ + +     +   
Sbjct: 81  CMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSES---IKNEVDAMCANYIVKK 137

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            G  GM+ GQ+LDI D  I E  +  I   KT  L+  +  S  I++        +L  +
Sbjct: 138 SGCFGMIRGQLLDI-DSKISEDNIIEIYDKKTCNLLKASTVSAGILSKVDHTTLLKLENY 196

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
             NLG+ FQ+ DD++D E D+ 
Sbjct: 197 AFNLGMAFQIIDDIMDYENDIK 218


>gi|170717621|ref|YP_001784702.1| polyprenyl synthetase [Haemophilus somnus 2336]
 gi|168825750|gb|ACA31121.1| Polyprenyl synthetase [Haemophilus somnus 2336]
          Length = 296

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 11/228 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           LQE+ +RI+       L+            L  A++Y LL GGK+IR FLV     +   
Sbjct: 8   LQESKQRIN-----FFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N +      AAIE IH YSLIHDDLP+MDN  +RRG PT HI +D  TAI+AG+ L  +A
Sbjct: 63  NLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDALQPFA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185
           FE+++     L    +  L+ +L +  G++GM  GQ LD+  +++ I+ + +  I + KT
Sbjct: 123 FELLTQ-TPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHRNKT 181

Query: 186 GALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCE 231
           GAL+  A + G I +    N K  E+L  +   +G+ FQ+ DD+LD E
Sbjct: 182 GALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIE 229


>gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
 gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
          Length = 296

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 11/228 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           LQE+ +RI+       L+            L  A++Y LL GGK+IR FLV     +   
Sbjct: 8   LQESKQRIN-----FFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N +      AAIE IH YSLIHDDLP+MDN  +RRG PT HI +D  TAI+AG+ L  +A
Sbjct: 63  NLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDALQPFA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKT 185
           FE+++     L    +  L+ +L +  G++GM  GQ LD+  +++ I+ + +  I + KT
Sbjct: 123 FELLTQ-TPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIHRNKT 181

Query: 186 GALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCE 231
           GAL+  A + G I +    N K  E+L  +   +G+ FQ+ DD+LD E
Sbjct: 182 GALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIE 229


>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
          Length = 359

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 11/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++E ++R++  LD  + Q            +  ++RY+LL GGK++R  L      L   
Sbjct: 72  MKEKAERVNRALDAAVAQREPRW-------IHESMRYSLLAGGKRVRPLLCIASCELVGG 124

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +  TA+    A E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ LL  A
Sbjct: 125 DERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLALA 184

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---K 184
           FE +++    +      + ++     IG +G++GGQ++DI  E + E  V  ++ +   K
Sbjct: 185 FEHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQLEYIHLHK 244

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T AL+  A   GAI+  A     E+LR F   +G++FQ+ DD+LD
Sbjct: 245 TAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILD 289


>gi|329908093|ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546763|gb|EGF31699.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 294

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 8/201 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+RYA+L GGK++R  LV   A LF+       R  +A+E IH YSL+HDD+P MD
Sbjct: 32  RLHAAMRYAVLDGGKRVRPLLVQAAAELFDAAPANVARAASAVEMIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IG 155
           +  +RRGKPTVH+ YDE TA++ G+ L   AF +++    +     R+  ML L  +  G
Sbjct: 92  DDALRRGKPTVHVAYDEATALLVGDALQAQAFFVLAGMDIE---PARAVAMLRLLADAAG 148

Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRC 212
             GM GGQ +D+    +D +  ++  + ++KTGAL+  +   GA             L  
Sbjct: 149 SIGMCGGQAIDLASVGMDLSLAELEQMHRLKTGALLRASVLLGAWCGTTPDAAATAALEA 208

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +   +G+ FQ+ DD+LD   D
Sbjct: 209 YAAAIGLAFQVIDDVLDATAD 229


>gi|56808396|ref|ZP_00366148.1| COG0142: Geranylgeranyl pyrophosphate synthase [Streptococcus
           pyogenes M49 591]
          Length = 290

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|109947621|ref|YP_664849.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba]
 gi|109714842|emb|CAJ99850.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba]
          Length = 303

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 17/216 (7%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASLFNVNHLTA----LRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +   ++L       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +Y+E +A++ G+ L TY+FE++S+    L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYNETSAVLIGDALNTYSFELLSN--ASLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G +   
Sbjct: 144 VELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLVSASLIMGLV--- 200

Query: 202 ASQNEKER----LRCFGENLGIIFQLADDLLDCEED 233
           AS N+ E     L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 201 ASGNKDEELSKWLQDFGLKIGLCFQVLDDIIDVTQD 236


>gi|94988855|ref|YP_596956.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429]
 gi|94992746|ref|YP_600845.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus
           pyogenes MGAS2096]
 gi|94542363|gb|ABF32412.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429]
 gi|94546254|gb|ABF36301.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           pyogenes MGAS2096]
          Length = 290

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|88799582|ref|ZP_01115158.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Reinekea sp. MED297]
 gi|88777667|gb|EAR08866.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Reinekea sp. MED297]
          Length = 293

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 7/200 (3%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +D L SAI Y+LL GGK++R  LV   + L        L    A+E IH YSL+HDDLP+
Sbjct: 27  SDELTSAIHYSLLNGGKRLRPSLVRAASDLVRAPDGLWLIPAQALEMIHVYSLVHDDLPA 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKPT H Q+ E TAI+AG+ L + AF +I+  +      IR  + L L  + 
Sbjct: 87  MDDDDLRRGKPTCHRQFSEATAILAGDALQSEAFALIAGAEALSPRQIRDMVRL-LAQSA 145

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERL 210
           G +GM+GGQM+D+  E   +   ++  + ++KTGAL+  + + GA + H S + +   RL
Sbjct: 146 GARGMVGGQMIDLASEQKTLTLNELSDLHRLKTGALISASLQLGA-LCHDSVDVEILARL 204

Query: 211 RCFGENLGIIFQLADDLLDC 230
             +G+ +G+ FQ+ADD+LD 
Sbjct: 205 ARYGDAIGLAFQIADDILDV 224


>gi|320173761|gb|EFW48944.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112]
          Length = 299

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLNALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|317180223|dbj|BAJ58009.1| geranyltranstransferase [Helicobacter pylori F32]
          Length = 303

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+  I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESRII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQD 236


>gi|152991761|ref|YP_001357482.1| geranyltranstransferase [Sulfurovum sp. NBC37-1]
 gi|151423622|dbj|BAF71125.1| geranyltranstransferase [Sulfurovum sp. NBC37-1]
          Length = 284

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 115/186 (61%), Gaps = 9/186 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L+      +  + + +AL V  A+E  H YSLIHDDLP+MD+  +RRG  T+
Sbjct: 33  GGKRFRPMLLLSIVDTYEPMLYDSALPVALALEMFHTYSLIHDDLPAMDDADLRRGHQTL 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++DEVTAI+AG+ L + AF +I+  K  L+++++ +L+  L  + G +GM+ GQ +D 
Sbjct: 93  HKRFDEVTAILAGDALNSDAFYLIA--KAPLREDVKIKLVELLARDGGSRGMVLGQAIDC 150

Query: 168 QDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             E     IDE +V  +   KT  L+  + + GA++   + + ++ L  FG +LG++FQ+
Sbjct: 151 YFENRPLTIDEVKV--LHTNKTAKLIAVSLQMGAVIVRLAPDVQKALYDFGIDLGLLFQI 208

Query: 224 ADDLLD 229
            DD++D
Sbjct: 209 QDDIID 214


>gi|88193100|pdb|2FOR|A Chain A, Crystal Structure Of The Shigella Flexneri Farnesyl
           Pyrophosphate Synthase Complex With An Isopentenyl
           Pyrophosphate
 gi|88193101|pdb|2FOR|B Chain B, Crystal Structure Of The Shigella Flexneri Farnesyl
           Pyrophosphate Synthase Complex With An Isopentenyl
           Pyrophosphate
          Length = 323

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 52  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 111

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 112 AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 171

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 172 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 227

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 228 ALPVLDKYAESIGLAFQVQDDILDVVGD 255


>gi|223043139|ref|ZP_03613186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Staphylococcus capitis SK14]
 gi|222443350|gb|EEE49448.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Staphylococcus capitis SK14]
          Length = 288

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 124/210 (59%), Gaps = 6/210 (2%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           SH+ T   + ++ +++    GGK+IR  L+    ++ N ++    +   A+E IH YSLI
Sbjct: 19  SHLNTDLEESMMYSLQ---AGGKRIRPVLLLLTLNMLNEDYHKGFQSALALEMIHTYSLI 75

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MD+   RRGK T H  Y E  AI+AG+ LLT AFE++S+    ++DN++ +++ 
Sbjct: 76  HDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDDL-IEDNVKVKVLQ 134

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L+   G  GM+GGQ LD+Q E   +D   +  I K KTGAL+ FA  +   +A   Q  
Sbjct: 135 RLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAVMAAVDIAQVDQKT 194

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              L  F ++LG++FQ+ DDLLD   D  K
Sbjct: 195 SHNLNEFSKHLGLMFQIKDDLLDVYGDEKK 224


>gi|21910690|ref|NP_664958.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315]
 gi|28895620|ref|NP_801970.1| geranyltranstransferase (farnesyl diphosphate synthase)
           [Streptococcus pyogenes SSI-1]
 gi|21904893|gb|AAM79761.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315]
 gi|28810869|dbj|BAC63803.1| putative geranyltranstransferase (farnesyl diphosphate synthase)
           [Streptococcus pyogenes SSI-1]
          Length = 290

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTDQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
          Length = 295

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  LD L       ++     RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALDALFKAPGPELE-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ + HA Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESD 230


>gi|307129906|ref|YP_003881922.1| geranyltranstransferase [Dickeya dadantii 3937]
 gi|306527435|gb|ADM97365.1| geranyltranstransferase [Dickeya dadantii 3937]
          Length = 303

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 16/230 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L  + +RI+  L+  +    S +  Q +  + +    ALLGGK++R FLV     LF +
Sbjct: 7   QLTAHHQRINATLNQFI----STLPFQSSPLVEAMAHGALLGGKRLRPFLVYTTGQLFGI 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AA+ECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ L T A
Sbjct: 63  SQNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAGDALQTLA 122

Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F I++ +P  ++ D  R  ++  L    G+ GM GGQ LD++ E   +D   +  I + K
Sbjct: 123 FSILADAPMPEVSDRDRLAMISELASASGVAGMCGGQALDLEAEGHQVDLLALERIHRHK 182

Query: 185 TGALMCFACESGAIMAHASQNEKERLRC-----FGENLGIIFQLADDLLD 229
           TGAL+  +   GA+ A     E+ RL       +   +G+ FQ+ DD+LD
Sbjct: 183 TGALIRASVRLGALAA----GERGRLALPCLDRYANAVGLAFQVQDDILD 228


>gi|207091726|ref|ZP_03239513.1| geranyltranstransferase [Helicobacter pylori HPKX_438_AG0C1]
 gi|207108226|ref|ZP_03242388.1| geranyltranstransferase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 303

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 113/194 (58%), Gaps = 11/194 (5%)

Query: 49  GGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK+ R   FL   CA +    ++       ++  +IEC+H YSLIHDDLP MDN  +RR
Sbjct: 45  GGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNASLRR 104

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
             PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I  +L+  L+ N G++GM+ G
Sbjct: 105 NHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHIIVELVKILSANGGIKGMILG 162

Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGI 219
           Q LD   ++  ++  Q+  + + KT  L+  +   G + +     E  + L+ FG   G+
Sbjct: 163 QALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKTGL 222

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD++D  +D
Sbjct: 223 CFQVLDDIIDVTQD 236


>gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
 gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
 gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 297

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 12/208 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLP 93
           RL  A+RY+LL GGK++R  L    A   +     A  V     A+E IH YSL+HDDLP
Sbjct: 36  RLAEAMRYSLLAGGKRLRPVLCLTFADTTSRQSTAAAPVEDAACAVEYIHTYSLVHDDLP 95

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           SMDN  +RRG+PT H  Y E  A++AG+ LLT AF ++ S      + +R  L   L   
Sbjct: 96  SMDNDDLRRGRPTNHKVYGEGMALLAGDALLTEAFALVGSG----PEPVRGLLCGELARA 151

Query: 154 IGLQGMLGGQMLDI-QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            G  GM+GGQ+LD+ +D       +  + +MKTGAL+  AC  G + A        R   
Sbjct: 152 AGAAGMVGGQVLDVAEDRPAHLDYLVRLHRMKTGALLRAACRMGVLGAGGDAETLARATT 211

Query: 213 FGENLGIIFQLADDLLDC---EEDLPKK 237
           +G+ +G+ FQ+ADD+LD     EDL K 
Sbjct: 212 YGDAIGLAFQIADDILDVTATAEDLGKP 239


>gi|46579760|ref|YP_010568.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449175|gb|AAS95827.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 287

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 122/196 (62%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL SA+ Y+LL GGK++R  L    A +  ++ ++ +   AAIE IH YSLIHDDLP+MD
Sbjct: 22  RLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMD 81

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+P+ H Q+DE TAI+AG+GLLT AF++++S    +        +  ++   G 
Sbjct: 82  DDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGS 141

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            GM+GGQ LD+     + ID   +  +  MKTGAL+  +C +GA++  A  +  E++  +
Sbjct: 142 SGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVAGALLGGAPASAVEQVAGY 201

Query: 214 GENLGIIFQLADDLLD 229
           G  +G  FQ+ DD+LD
Sbjct: 202 GAAIGAAFQIVDDILD 217


>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
           IAM 14863]
 gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
           IAM 14863]
          Length = 297

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 116/203 (57%), Gaps = 9/203 (4%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL+ A+RY+LL GGK++R  L    + LF +     +    A+E IH YSLIHDDLP MD
Sbjct: 32  RLVEAMRYSLLAGGKRLRPILTIAASELFGLEAADVMPGACALEMIHTYSLIHDDLPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDNIRSQLMLSLTH 152
           +  +RRG+PT H  Y E  A++AG+ LLT AF +++     P+      +R+   L+   
Sbjct: 92  DDDLRRGRPTCHKVYGEAMAVLAGDALLTQAFALMAEQAAVPRVGPARAVRAAAELAHAA 151

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
               +GM+GGQ+ D+  E    DE Q+  I  +KTGAL   A   G I+A A + + +RL
Sbjct: 152 GA--EGMVGGQVEDLAWEGRQADEPQLRRIHSLKTGALFRAAVRMGGILAGAGEEDLDRL 209

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +  + G+ FQ+ DD+LD   D
Sbjct: 210 GRYATHFGLAFQIWDDVLDVTGD 232


>gi|24111799|ref|NP_706309.1| geranyltranstransferase [Shigella flexneri 2a str. 301]
 gi|30061915|ref|NP_836086.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
 gi|24050587|gb|AAN42016.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
           flexneri 2a str. 301]
 gi|30040159|gb|AAP15892.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
           flexneri 2a str. 2457T]
 gi|281599753|gb|ADA72737.1| Geranyltranstransferase [Shigella flexneri 2002017]
 gi|313646962|gb|EFS11419.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
 gi|332760701|gb|EGJ90989.1| geranyltranstransferase [Shigella flexneri 4343-70]
 gi|332761685|gb|EGJ91964.1| geranyltranstransferase [Shigella flexneri 2747-71]
 gi|332764298|gb|EGJ94534.1| geranyltranstransferase [Shigella flexneri K-671]
 gi|332768526|gb|EGJ98709.1| geranyltranstransferase [Shigella flexneri 2930-71]
 gi|333007813|gb|EGK27289.1| geranyltranstransferase [Shigella flexneri K-218]
 gi|333021995|gb|EGK41240.1| geranyltranstransferase [Shigella flexneri K-304]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|110804443|ref|YP_687963.1| geranyltranstransferase [Shigella flexneri 5 str. 8401]
 gi|110613991|gb|ABF02658.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
           flexneri 5 str. 8401]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|318604611|emb|CBY26109.1| octaprenyl-diphosphate synthase; Dimethylallyltransferase;
           Geranyltranstransferase (farnesyldiphosphate synthase);
           Geranylgeranyl pyrophosphate synthetase [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 306

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 123/204 (60%), Gaps = 7/204 (3%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLP 93
           N  L+ A+RY A+LGGK++R +LV     +F ++ LT+L    AAIECIH YSLIHDDLP
Sbjct: 36  NSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLS-LTSLDAPAAAIECIHAYSLIHDDLP 94

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+PT H+++ E  AI+AG+ L T AF I++ +P   + D  R  ++  L H
Sbjct: 95  AMDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEAPMPDVADKDRLSMIAELAH 154

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A A   E    
Sbjct: 155 ASGVAGMCGGQALDLAAESRQITLDDLEKIHRHKTGALIRAAVRLGALAAGALGREALPL 214

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +   +G+ FQ+ DD+LD   D
Sbjct: 215 LDRYANAIGLAFQVQDDILDVIGD 238


>gi|116629411|ref|YP_814583.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
           33323]
 gi|282850888|ref|ZP_06260262.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
 gi|116094993|gb|ABJ60145.1| farnesyl-diphosphate synthase [Lactobacillus gasseri ATCC 33323]
 gi|282557840|gb|EFB63428.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
          Length = 288

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 25/230 (10%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL 70
           + +ID  L+D       H+ ++ ++ + S I  Y+++ GGK++R  L    A+L  +N+ 
Sbjct: 11  TPQIDKFLED-------HLASEVDNPIFSKIMSYSVMAGGKRLRPLLF--LATLETLNYK 61

Query: 71  ---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              + LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL   
Sbjct: 62  ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ--VFMIQK 182
            + I+           + L + ++  +G  GM+GGQ LDI    ++ + E    +  ++ 
Sbjct: 122 IQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENAKVIDQMEW 175

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTG L+  + +  A+ A AS +E +RL  F +  G  +Q+ DDL+D  E
Sbjct: 176 LKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVE 225


>gi|157155867|ref|YP_001461603.1| geranyltranstransferase [Escherichia coli E24377A]
 gi|157159942|ref|YP_001457260.1| geranyltranstransferase [Escherichia coli HS]
 gi|193065191|ref|ZP_03046264.1| geranyltranstransferase [Escherichia coli E22]
 gi|193068605|ref|ZP_03049566.1| geranyltranstransferase [Escherichia coli E110019]
 gi|194428795|ref|ZP_03061330.1| geranyltranstransferase [Escherichia coli B171]
 gi|218552984|ref|YP_002385897.1| geranyltranstransferase [Escherichia coli IAI1]
 gi|218693881|ref|YP_002401548.1| geranyltranstransferase [Escherichia coli 55989]
 gi|260842619|ref|YP_003220397.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
 gi|260853641|ref|YP_003227532.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
 gi|260866579|ref|YP_003232981.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
 gi|300818254|ref|ZP_07098465.1| polyprenyl synthetase [Escherichia coli MS 107-1]
 gi|300820340|ref|ZP_07100492.1| polyprenyl synthetase [Escherichia coli MS 119-7]
 gi|300903314|ref|ZP_07121242.1| polyprenyl synthetase [Escherichia coli MS 84-1]
 gi|300924142|ref|ZP_07140134.1| polyprenyl synthetase [Escherichia coli MS 182-1]
 gi|301301569|ref|ZP_07207704.1| polyprenyl synthetase [Escherichia coli MS 124-1]
 gi|301330717|ref|ZP_07223319.1| polyprenyl synthetase [Escherichia coli MS 78-1]
 gi|307312204|ref|ZP_07591840.1| Polyprenyl synthetase [Escherichia coli W]
 gi|331666770|ref|ZP_08367644.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA271]
 gi|331676088|ref|ZP_08376800.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H591]
 gi|157065622|gb|ABV04877.1| geranyltranstransferase [Escherichia coli HS]
 gi|157077897|gb|ABV17605.1| geranyltranstransferase [Escherichia coli E24377A]
 gi|192927165|gb|EDV81786.1| geranyltranstransferase [Escherichia coli E22]
 gi|192957968|gb|EDV88410.1| geranyltranstransferase [Escherichia coli E110019]
 gi|194413098|gb|EDX29385.1| geranyltranstransferase [Escherichia coli B171]
 gi|218350613|emb|CAU96305.1| geranyltranstransferase [Escherichia coli 55989]
 gi|218359752|emb|CAQ97293.1| geranyltranstransferase [Escherichia coli IAI1]
 gi|257752290|dbj|BAI23792.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
 gi|257757766|dbj|BAI29263.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
 gi|257762935|dbj|BAI34430.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
 gi|300404609|gb|EFJ88147.1| polyprenyl synthetase [Escherichia coli MS 84-1]
 gi|300419595|gb|EFK02906.1| polyprenyl synthetase [Escherichia coli MS 182-1]
 gi|300527125|gb|EFK48194.1| polyprenyl synthetase [Escherichia coli MS 119-7]
 gi|300529145|gb|EFK50207.1| polyprenyl synthetase [Escherichia coli MS 107-1]
 gi|300843066|gb|EFK70826.1| polyprenyl synthetase [Escherichia coli MS 124-1]
 gi|300843378|gb|EFK71138.1| polyprenyl synthetase [Escherichia coli MS 78-1]
 gi|306907706|gb|EFN38208.1| Polyprenyl synthetase [Escherichia coli W]
 gi|315059698|gb|ADT74025.1| geranyltranstransferase [Escherichia coli W]
 gi|315256246|gb|EFU36214.1| polyprenyl synthetase [Escherichia coli MS 85-1]
 gi|323152111|gb|EFZ38404.1| geranyltranstransferase [Escherichia coli EPECa14]
 gi|323160472|gb|EFZ46420.1| geranyltranstransferase [Escherichia coli E128010]
 gi|323178316|gb|EFZ63894.1| geranyltranstransferase [Escherichia coli 1180]
 gi|323379736|gb|ADX52004.1| Polyprenyl synthetase [Escherichia coli KO11]
 gi|323945322|gb|EGB41378.1| polyprenyl synthetase [Escherichia coli H120]
 gi|324116905|gb|EGC10818.1| polyprenyl synthetase [Escherichia coli E1167]
 gi|331065994|gb|EGI37878.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA271]
 gi|331076146|gb|EGI47428.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H591]
 gi|333010863|gb|EGK30289.1| geranyltranstransferase [Shigella flexneri K-272]
 gi|333021362|gb|EGK40615.1| geranyltranstransferase [Shigella flexneri K-227]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|325128970|gb|EGC51821.1| geranyltranstransferase [Neisseria meningitidis N1568]
          Length = 249

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 116/196 (59%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E  A++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHIKYGEANALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +  +  +  +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDAYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDC+ D
Sbjct: 218 GLAFQVIDDVLDCDAD 233


>gi|300937031|ref|ZP_07151897.1| polyprenyl synthetase [Escherichia coli MS 21-1]
 gi|300457862|gb|EFK21355.1| polyprenyl synthetase [Escherichia coli MS 21-1]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLEALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|333008616|gb|EGK28084.1| geranyltranstransferase [Shigella flexneri VA-6]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|319787810|ref|YP_004147285.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466322|gb|ADV28054.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 291

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 122/230 (53%), Gaps = 12/230 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
           P      + R +  LD LL        T    RL +A+R+A LGG K++R  LV    + 
Sbjct: 3   PEVFTRWAARTEATLDRLL-----PADTAEPRRLHAAMRHATLGGGKRMRPLLVYAAGTA 57

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +  +     AA+E +H YSL+HDDLP+MD+  +RRG+PTVH+ +DE TAI+AG+ L 
Sbjct: 58  LGADEASLDLPAAAVELVHAYSLVHDDLPAMDDDDMRRGRPTVHVAFDEATAILAGDALQ 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183
           T      +         +R+  M SL    G  GM GGQ LDI D    +  +  +Q+M 
Sbjct: 118 T--LAFEALADAAAPAELRAGWMQSLARASGAGGMCGGQALDI-DATGSQLPLEALQRMH 174

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             KTGAL+  A   GA+ A A +    +L  + + LG+ FQ+ DDLLD E
Sbjct: 175 SLKTGALIRAAVRMGALGAGADEARLRQLDRYADALGLAFQVRDDLLDIE 224


>gi|293418488|ref|ZP_06660923.1| geranyltranstransferase [Escherichia coli B088]
 gi|291325016|gb|EFE64431.1| geranyltranstransferase [Escherichia coli B088]
 gi|323184753|gb|EFZ70124.1| geranyltranstransferase [Escherichia coli 1357]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDANMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|82542909|ref|YP_406856.1| geranyltranstransferase [Shigella boydii Sb227]
 gi|81244320|gb|ABB65028.1| geranyltranstransferase [Shigella boydii Sb227]
 gi|320186050|gb|EFW60795.1| geranyltranstransferase [Shigella flexneri CDC 796-83]
 gi|332098531|gb|EGJ03497.1| geranyltranstransferase [Shigella boydii 3594-74]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|16128406|ref|NP_414955.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
 gi|74310990|ref|YP_309409.1| geranyltranstransferase [Shigella sonnei Ss046]
 gi|82775670|ref|YP_402017.1| geranyltranstransferase [Shigella dysenteriae Sd197]
 gi|89107291|ref|AP_001071.1| geranyltranstransferase [Escherichia coli str. K-12 substr. W3110]
 gi|170080007|ref|YP_001729327.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
 gi|170683582|ref|YP_001742558.1| geranyltranstransferase [Escherichia coli SMS-3-5]
 gi|187730884|ref|YP_001879130.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
 gi|188492835|ref|ZP_03000105.1| geranyltranstransferase [Escherichia coli 53638]
 gi|191166720|ref|ZP_03028547.1| geranyltranstransferase [Escherichia coli B7A]
 gi|194438870|ref|ZP_03070955.1| geranyltranstransferase [Escherichia coli 101-1]
 gi|209917634|ref|YP_002291718.1| geranyltranstransferase [Escherichia coli SE11]
 gi|218698670|ref|YP_002406299.1| geranyltranstransferase [Escherichia coli IAI39]
 gi|218703704|ref|YP_002411223.1| geranyltranstransferase [Escherichia coli UMN026]
 gi|238899709|ref|YP_002925505.1| geranyltranstransferase [Escherichia coli BW2952]
 gi|253774594|ref|YP_003037425.1| geranyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160487|ref|YP_003043595.1| geranyltranstransferase [Escherichia coli B str. REL606]
 gi|256020388|ref|ZP_05434253.1| geranyltranstransferase [Shigella sp. D9]
 gi|256023962|ref|ZP_05437827.1| geranyltranstransferase [Escherichia sp. 4_1_40B]
 gi|293403541|ref|ZP_06647632.1| geranyltranstransferase [Escherichia coli FVEC1412]
 gi|293413676|ref|ZP_06656325.1| geranyltranstransferase [Escherichia coli B185]
 gi|297518956|ref|ZP_06937342.1| geranyltranstransferase [Escherichia coli OP50]
 gi|298379153|ref|ZP_06989034.1| geranyltranstransferase [Escherichia coli FVEC1302]
 gi|300900489|ref|ZP_07118656.1| polyprenyl synthetase [Escherichia coli MS 198-1]
 gi|300918198|ref|ZP_07134805.1| polyprenyl synthetase [Escherichia coli MS 115-1]
 gi|300930283|ref|ZP_07145696.1| polyprenyl synthetase [Escherichia coli MS 187-1]
 gi|300947928|ref|ZP_07162076.1| polyprenyl synthetase [Escherichia coli MS 116-1]
 gi|300957986|ref|ZP_07170151.1| polyprenyl synthetase [Escherichia coli MS 175-1]
 gi|301022588|ref|ZP_07186460.1| polyprenyl synthetase [Escherichia coli MS 69-1]
 gi|301025692|ref|ZP_07189208.1| polyprenyl synthetase [Escherichia coli MS 196-1]
 gi|301647344|ref|ZP_07247156.1| polyprenyl synthetase [Escherichia coli MS 146-1]
 gi|307137064|ref|ZP_07496420.1| geranyltranstransferase [Escherichia coli H736]
 gi|309787014|ref|ZP_07681626.1| geranyltranstransferase [Shigella dysenteriae 1617]
 gi|309794853|ref|ZP_07689274.1| polyprenyl synthetase [Escherichia coli MS 145-7]
 gi|312970516|ref|ZP_07784697.1| geranyltranstransferase [Escherichia coli 1827-70]
 gi|331640938|ref|ZP_08342073.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H736]
 gi|331651356|ref|ZP_08352381.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli M718]
 gi|331661799|ref|ZP_08362722.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA143]
 gi|331671966|ref|ZP_08372762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA280]
 gi|332281567|ref|ZP_08393980.1| geranyltranstransferase [Shigella sp. D9]
 gi|124931|sp|P22939|ISPA_ECOLI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
           Bound To Isopentyl Pyrophosphate And Risedronate
 gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
           Bound To Isopentyl Pyrophosphate And Risedronate
 gi|216584|dbj|BAA00599.1| farnesyl diphosphate synthase [Escherichia coli]
 gi|1773105|gb|AAB40177.1| geranyltransperase [Escherichia coli]
 gi|1786623|gb|AAC73524.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
 gi|73854467|gb|AAZ87174.1| geranyltranstransferase [Shigella sonnei Ss046]
 gi|81239818|gb|ABB60528.1| geranyltranstransferase [Shigella dysenteriae Sd197]
 gi|85674561|dbj|BAE76201.1| geranyltranstransferase [Escherichia coli str. K12 substr. W3110]
 gi|169887842|gb|ACB01549.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
 gi|170521300|gb|ACB19478.1| geranyltranstransferase [Escherichia coli SMS-3-5]
 gi|187427876|gb|ACD07150.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
 gi|188488034|gb|EDU63137.1| geranyltranstransferase [Escherichia coli 53638]
 gi|190903231|gb|EDV62953.1| geranyltranstransferase [Escherichia coli B7A]
 gi|194422164|gb|EDX38166.1| geranyltranstransferase [Escherichia coli 101-1]
 gi|209910893|dbj|BAG75967.1| geranyltranstransferase [Escherichia coli SE11]
 gi|218368656|emb|CAR16395.1| geranyltranstransferase [Escherichia coli IAI39]
 gi|218430801|emb|CAR11675.1| geranyltranstransferase [Escherichia coli UMN026]
 gi|238861298|gb|ACR63296.1| geranyltranstransferase [Escherichia coli BW2952]
 gi|242376199|emb|CAQ30890.1| farnesyl diphosphate synthase / geranyl diphosphate synthase
           [Escherichia coli BL21(DE3)]
 gi|253325638|gb|ACT30240.1| Polyprenyl synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972388|gb|ACT38059.1| geranyltranstransferase [Escherichia coli B str. REL606]
 gi|253976598|gb|ACT42268.1| geranyltranstransferase [Escherichia coli BL21(DE3)]
 gi|260450392|gb|ACX40814.1| Polyprenyl synthetase [Escherichia coli DH1]
 gi|284920231|emb|CBG33290.1| geranyltranstransferase [Escherichia coli 042]
 gi|291429394|gb|EFF02414.1| geranyltranstransferase [Escherichia coli FVEC1412]
 gi|291433734|gb|EFF06707.1| geranyltranstransferase [Escherichia coli B185]
 gi|298280266|gb|EFI21770.1| geranyltranstransferase [Escherichia coli FVEC1302]
 gi|299880004|gb|EFI88215.1| polyprenyl synthetase [Escherichia coli MS 196-1]
 gi|300315322|gb|EFJ65106.1| polyprenyl synthetase [Escherichia coli MS 175-1]
 gi|300355970|gb|EFJ71840.1| polyprenyl synthetase [Escherichia coli MS 198-1]
 gi|300397469|gb|EFJ81007.1| polyprenyl synthetase [Escherichia coli MS 69-1]
 gi|300414649|gb|EFJ97959.1| polyprenyl synthetase [Escherichia coli MS 115-1]
 gi|300452528|gb|EFK16148.1| polyprenyl synthetase [Escherichia coli MS 116-1]
 gi|300461855|gb|EFK25348.1| polyprenyl synthetase [Escherichia coli MS 187-1]
 gi|301074489|gb|EFK89295.1| polyprenyl synthetase [Escherichia coli MS 146-1]
 gi|308121506|gb|EFO58768.1| polyprenyl synthetase [Escherichia coli MS 145-7]
 gi|308924592|gb|EFP70087.1| geranyltranstransferase [Shigella dysenteriae 1617]
 gi|309700683|emb|CBI99979.1| geranyltranstransferase [Escherichia coli ETEC H10407]
 gi|310337165|gb|EFQ02303.1| geranyltranstransferase [Escherichia coli 1827-70]
 gi|315135103|dbj|BAJ42262.1| geranyltranstransferase [Escherichia coli DH1]
 gi|320201662|gb|EFW76238.1| geranyltranstransferase [Escherichia coli EC4100B]
 gi|323164212|gb|EFZ50019.1| geranyltranstransferase [Shigella sonnei 53G]
 gi|323170503|gb|EFZ56153.1| geranyltranstransferase [Escherichia coli LT-68]
 gi|323943227|gb|EGB39383.1| polyprenyl synthetase [Escherichia coli E482]
 gi|323963407|gb|EGB58969.1| polyprenyl synthetase [Escherichia coli H489]
 gi|323972271|gb|EGB67481.1| polyprenyl synthetase [Escherichia coli TA007]
 gi|324016723|gb|EGB85942.1| polyprenyl synthetase [Escherichia coli MS 117-3]
 gi|331037736|gb|EGI09956.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H736]
 gi|331051097|gb|EGI23149.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli M718]
 gi|331060221|gb|EGI32185.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA143]
 gi|331070955|gb|EGI42314.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA280]
 gi|332103919|gb|EGJ07265.1| geranyltranstransferase [Shigella sp. D9]
 gi|332341784|gb|AEE55118.1| geranyltranstransferase IspA [Escherichia coli UMNK88]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|46015525|pdb|1RQI|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
           Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
           Thiolodiphosphate
 gi|46015526|pdb|1RQI|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
           Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
           Thiolodiphosphate
          Length = 300

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 29  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 88

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 89  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 148

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 149 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 204

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 205 ALPVLDKYAESIGLAFQVQDDILDVVGD 232


>gi|306813113|ref|ZP_07447306.1| geranyltranstransferase [Escherichia coli NC101]
 gi|331645594|ref|ZP_08346698.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli M605]
 gi|331656475|ref|ZP_08357437.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA206]
 gi|331681814|ref|ZP_08382447.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H299]
 gi|305853876|gb|EFM54315.1| geranyltranstransferase [Escherichia coli NC101]
 gi|324010099|gb|EGB79318.1| polyprenyl synthetase [Escherichia coli MS 57-2]
 gi|331045756|gb|EGI17882.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli M605]
 gi|331054723|gb|EGI26732.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA206]
 gi|331081016|gb|EGI52181.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H299]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 295

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 120/198 (60%), Gaps = 5/198 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++++ Y+L+ GGK++R  L    A L   +    L    AIECIH YSLIHDDLP+MD+
Sbjct: 34  LVASMEYSLMAGGKRLRPVLCLAWAELAGGSVHAVLDFACAIECIHTYSLIHDDLPAMDD 93

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKP+ H ++DE TAI+AG+GLLT AF + SS   +L+     + +  L+   G +
Sbjct: 94  DDLRRGKPSNHKRFDEATAILAGDGLLTEAFTLASS--LELRPERILKAVFHLSTAAGPR 151

Query: 158 GMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ+LD  +  +     Q+  +   KTGAL+  +C +G ++     +E+ +   +G 
Sbjct: 152 GMVGGQVLDMGLTGKSASLPQLREMHAKKTGALIETSCVTGCVLGGGDDSEQAKASEYGR 211

Query: 216 NLGIIFQLADDLLDCEED 233
            +G+ FQ+ DD+LD   D
Sbjct: 212 AIGLAFQVTDDILDVIGD 229


>gi|15611931|ref|NP_223582.1| geranyltranstransferase [Helicobacter pylori J99]
 gi|4155442|gb|AAD06447.1| GERANYLTRANSTRANSFERASE [Helicobacter pylori J99]
          Length = 303

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 115/194 (59%), Gaps = 11/194 (5%)

Query: 49  GGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK+ R   FL   C+ +    ++       ++  +IEC+H YSLIHDDLP MDN  +RR
Sbjct: 45  GGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRR 104

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
             PT+H +YDE TA++ G+ L TY+FE++S+  + L+  I  +L+  L+ N G++GM+ G
Sbjct: 105 NHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESRIIVELVKILSANGGIKGMILG 162

Query: 163 QMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGI 219
           Q LD   ++  ++  Q+  + + KT  L+  +   G + +  +  E  + L+ FG  +G+
Sbjct: 163 QALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGL 222

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD++D  +D
Sbjct: 223 CFQVLDDIIDVTQD 236


>gi|218688284|ref|YP_002396496.1| geranyltranstransferase [Escherichia coli ED1a]
 gi|218425848|emb|CAR06654.1| geranyltranstransferase [Escherichia coli ED1a]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|15800151|ref|NP_286163.1| geranyltranstransferase [Escherichia coli O157:H7 EDL933]
 gi|15829729|ref|NP_308502.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
 gi|168749882|ref|ZP_02774904.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
 gi|168756962|ref|ZP_02781969.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
 gi|168761626|ref|ZP_02786633.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
 gi|168768371|ref|ZP_02793378.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
 gi|168776274|ref|ZP_02801281.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
 gi|168783286|ref|ZP_02808293.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
 gi|168786267|ref|ZP_02811274.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
 gi|168800303|ref|ZP_02825310.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
 gi|195938512|ref|ZP_03083894.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4024]
 gi|208807604|ref|ZP_03249941.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
 gi|208815942|ref|ZP_03257121.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
 gi|208822955|ref|ZP_03263273.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
 gi|209397720|ref|YP_002269066.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
 gi|217326244|ref|ZP_03442328.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
 gi|254791605|ref|YP_003076442.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
 gi|261223902|ref|ZP_05938183.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256384|ref|ZP_05948917.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281328|ref|YP_003498146.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
 gi|12513277|gb|AAG54771.1|AE005221_8 geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
           coli O157:H7 str. EDL933]
 gi|13359932|dbj|BAB33898.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
 gi|187768276|gb|EDU32120.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
 gi|188015849|gb|EDU53971.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
 gi|188999339|gb|EDU68325.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
 gi|189356028|gb|EDU74447.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
 gi|189362401|gb|EDU80820.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
 gi|189367958|gb|EDU86374.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
 gi|189373540|gb|EDU91956.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
 gi|189377422|gb|EDU95838.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
 gi|208727405|gb|EDZ77006.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
 gi|208732590|gb|EDZ81278.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
 gi|208737148|gb|EDZ84832.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
 gi|209159120|gb|ACI36553.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
 gi|209744014|gb|ACI70314.1| geranyltranstransferase [Escherichia coli]
 gi|209744016|gb|ACI70315.1| geranyltranstransferase [Escherichia coli]
 gi|209744018|gb|ACI70316.1| geranyltranstransferase [Escherichia coli]
 gi|209744020|gb|ACI70317.1| geranyltranstransferase [Escherichia coli]
 gi|209744022|gb|ACI70318.1| geranyltranstransferase [Escherichia coli]
 gi|217322465|gb|EEC30889.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
 gi|254591005|gb|ACT70366.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
 gi|290761201|gb|ADD55162.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
 gi|320192835|gb|EFW67475.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212]
 gi|320638415|gb|EFX08129.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101]
 gi|320643795|gb|EFX12918.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89]
 gi|320649146|gb|EFX17724.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687]
 gi|320656039|gb|EFX23955.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320661189|gb|EFX28620.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665165|gb|EFX32258.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61]
 gi|326341183|gb|EGD64975.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044]
 gi|326346042|gb|EGD69781.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601]
 gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601]
          Length = 297

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 121/197 (61%), Gaps = 6/197 (3%)

Query: 41  SAIRYALL-GGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           +A+RYA+L GGK++R  LV   C ++  +    ALR   A+E IH YSL+HDD+P MDN 
Sbjct: 37  AAMRYAVLDGGKRLRPLLVLAACEAVGGLGQ-AALRAACAVELIHAYSLVHDDMPCMDND 95

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRGKPTVH+++ +  A++AG+ L   AFE++ +P+  +   ++++L   L    G  G
Sbjct: 96  VLRRGKPTVHVRFGQAQALLAGDALQALAFELL-TPEDGVPPAMQARLCRLLAQAAGADG 154

Query: 159 MLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           M GGQ +D+    + + + Q+  + ++KTGAL+  +   GA     ++  ++ L  +G  
Sbjct: 155 MAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGAACGEPARVAEQALAQYGAA 214

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQ+ DD+LD  +D
Sbjct: 215 IGLAFQVVDDVLDVTQD 231


>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
 gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
          Length = 297

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 127/226 (56%), Gaps = 12/226 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           + R++T LD +L        +    RL  A+RY +L GGK+IR  L         ++   
Sbjct: 14  AARVETALDQILPPV-----SVQPSRLHEAMRYTVLAGGKRIRPLLAYAAGEALGLDAAL 68

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                 A+E IH YSLIHDDLP+MD+  +RRG+PT H  +DE TAI+AG+ L T AF+ +
Sbjct: 69  LDHPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTLAFQAL 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +     L    R  ++ +L    G +GM+GGQ +D++ E   +D  Q+  I   KTGAL+
Sbjct: 129 AE-APGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLENIHIHKTGALI 187

Query: 190 CFACESGAIMAHAS--QNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + + G ++AH     ++ ERL  + + LG+ FQ+ DD+LD E D
Sbjct: 188 RVSVQMG-VLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGD 232


>gi|210135119|ref|YP_002301558.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12]
 gi|210133087|gb|ACJ08078.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12]
          Length = 303

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   C+ +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+    L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--ALLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG   G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236


>gi|261838303|gb|ACX98069.1| geranyltranstransferase [Helicobacter pylori 51]
          Length = 303

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 11/213 (5%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYFEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+  I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESPII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G + + 
Sbjct: 144 VELIKILSVNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASG 203

Query: 202 ASQNE-KERLRCFGENLGIIFQLADDLLDCEED 233
               E  + L+ FG   G+ FQ+ DD++D  +D
Sbjct: 204 IKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQD 236


>gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
 gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
          Length = 309

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 129/244 (52%), Gaps = 21/244 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+  +   D  L+ LL  +     + H      ++RY++  GGK++R  L  E   +   
Sbjct: 12  LKSGAAATDAALERLLPGSEIAPHSIHR-----SMRYSVFAGGKRLRPILCMEAGRMVAG 66

Query: 68  NHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                +  +G+A+E +H YSLIHDDLPS D+  +RRGKPT HI + E  AI+ G+ L T+
Sbjct: 67  KLPAGIADLGSALEMLHTYSLIHDDLPSFDDDDLRRGKPTSHIVFGEAIAILTGDALQTF 126

Query: 127 AFEIISS---PKTQLKDNIR-----SQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDET-- 175
           A+E +S    P       IR     +   +  T   GL  GM+GGQ+LDI+ E    T  
Sbjct: 127 AYETLSRLSCPAEATVQIIREIAIATGTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPTAE 186

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEE 232
           QV  I + KTGAL+  +  +G I A AS    E LR FG+  G+ FQ+ DD+LD     E
Sbjct: 187 QVDRIHRAKTGALITTSIVTGGIFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQSSE 246

Query: 233 DLPK 236
           DL K
Sbjct: 247 DLGK 250


>gi|238852560|ref|ZP_04642970.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
 gi|238834706|gb|EEQ26933.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
          Length = 288

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 25/230 (10%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL 70
           + +ID  L+D       H+ ++ ++ + S I  Y+++ GGK++R  L    A+L  +N+ 
Sbjct: 11  TPQIDKFLED-------HLASEVDNPIFSKIMSYSVMAGGKRLRPLLF--LATLETLNYK 61

Query: 71  ---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              + LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL   
Sbjct: 62  ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHRKWGEAEAILAGDALLPLG 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ--VFMIQK 182
            + I+           + L + ++  +G  GM+GGQ LDI    ++ + E    +  ++ 
Sbjct: 122 IQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKENAKVIDQMEW 175

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTG L+  + +  A+ A AS +E +RL  F +  G  +Q+ DDL+D  E
Sbjct: 176 LKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVE 225


>gi|323976098|gb|EGB71191.1| polyprenyl synthetase [Escherichia coli TW10509]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLNALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPILDKYAESIGLAFQVQDDILDVVGD 231


>gi|281177591|dbj|BAI53921.1| geranyltranstransferase [Escherichia coli SE15]
          Length = 299

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
 gi|212673609|gb|EEB34092.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
          Length = 298

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 131/234 (55%), Gaps = 14/234 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECA 62
           + S L+E  K +++ L       A+ +  Q    RL  ++ Y+L  GGK++R  L   CA
Sbjct: 8   MKSLLKERGKLVESYL-------ATCLDGQEMPPRLRESMLYSLQAGGKRLRPVLCLSCA 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L  +     L   +AIE +H YSLIHDDLP+MD+  +RRGKP+ H  +DE TAI+AG+ 
Sbjct: 61  ALCGLKAEDVLPFASAIEMVHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDA 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LLT AF  +   + +L      + M       G  GM+GGQ  D+    +    +  +++
Sbjct: 121 LLTDAFAHMC--RVELPAGQVLRAMAEFARAAGSSGMVGGQEWDMLYTGLPPVSMAELRR 178

Query: 183 ---MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              MKTGAL+  +C  GA++A A+ +  ER+  +G  LG+ FQ+ADD+LD   D
Sbjct: 179 MHAMKTGALLRASCVCGALLAGAADDVCERIGRYGAALGVAFQIADDILDVVSD 232


>gi|261839715|gb|ACX99480.1| geranyltranstransferase (ispA) [Helicobacter pylori 52]
          Length = 303

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 123/214 (57%), Gaps = 13/214 (6%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  +   Q+  + + KT  L+  +   G ++A 
Sbjct: 144 VELIKILSANGGIKGMILGQALDCYFENTPLSLEQLTFLHEHKTAKLISASLMMG-LVAS 202

Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
             ++E   + L+ FG   G+ FQ+ DD++D  +D
Sbjct: 203 GIKDEGLFKWLQAFGLKTGLCFQVLDDIIDVTQD 236


>gi|332201672|gb|EGJ15742.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA47368]
          Length = 291

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVATALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|308183081|ref|YP_003927208.1| geranyltranstransferase [Helicobacter pylori PeCan4]
 gi|308065266|gb|ADO07158.1| geranyltranstransferase [Helicobacter pylori PeCan4]
          Length = 303

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 13/214 (6%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASL----FNVNHLTALRVGAAIECIH 83
           H+++ H     +     L GGK+ R   FL   CA +    ++       ++  +IEC+H
Sbjct: 26  HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLH 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++S+  + L+ +I 
Sbjct: 86  TYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSN--SLLESHII 143

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            +L+  L+ N G++GM+ GQ LD   ++  ++  Q+  + + KT  L+  +   G ++A 
Sbjct: 144 VELVKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMG-LVAS 202

Query: 202 ASQNEK--ERLRCFGENLGIIFQLADDLLDCEED 233
             ++E   + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 203 GIKDEGLFKWLQDFGLKMGLCFQVLDDIIDVTQD 236


>gi|56708589|ref|YP_170485.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110671060|ref|YP_667617.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301456|ref|YP_001121424.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|224457771|ref|ZP_03666244.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254371220|ref|ZP_04987222.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875451|ref|ZP_05248161.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56605081|emb|CAG46195.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321393|emb|CAL09578.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049233|gb|ABO46304.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151569460|gb|EDN35114.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841450|gb|EET19886.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159817|gb|ADA79208.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 293

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 11/198 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LLSA+ Y+   GGK+IR+  V        ++     ++  A+E IH YSLIHDDLP+MDN
Sbjct: 28  LLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDN 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT HI+++E TAI+AG+ L   AFEI+        D ++    L      G  
Sbjct: 88  DTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKL-FAQYCGAS 146

Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLR 211
           GM+GGQ LDI+ E     I+E Q+    K    A M  AC     +   +QN +  + L 
Sbjct: 147 GMVGGQQLDIEGENKKLKIEELQILHTNKT---AKMFRACIVLPYILSQNQNSQIEDLLV 203

Query: 212 CFGENLGIIFQLADDLLD 229
              + +G+ FQ+ DD+LD
Sbjct: 204 RLSDLIGLCFQIKDDILD 221


>gi|238854801|ref|ZP_04645131.1| geranyltranstransferase [Lactobacillus jensenii 269-3]
 gi|260664032|ref|ZP_05864885.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           SJ-7A-US]
 gi|282933879|ref|ZP_06339227.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
 gi|238832591|gb|EEQ24898.1| geranyltranstransferase [Lactobacillus jensenii 269-3]
 gi|260561918|gb|EEX27887.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           SJ-7A-US]
 gi|281301968|gb|EFA94222.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
          Length = 288

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 123/226 (54%), Gaps = 20/226 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRS--FLVTECASLFNVNH 69
           K+   I+D  L Q   H+ ++  D+  S I  Y+++ GGK++R   FL T  +    +N 
Sbjct: 9   KKYQPIIDHYLEQ---HLASEIEDKKFSQIMAYSVMAGGKRLRPLLFLATLISLGKEINE 65

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +RV   IE IH YSLIHDDLP+MDN   RRG  T H ++ E  AI+AG+ LL    E
Sbjct: 66  -KEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDALLPMGLE 124

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM--IQKMK 184
            I+S K        ++++  + + IG  GM GGQ LDI    +E + E   F+  ++ +K
Sbjct: 125 WIASAKN-------AEMVAVMANAIGPNGMAGGQYLDIDSTNNEAVKEDNNFINRMEWLK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           TG L+  + E   I A+A+   ++ L  F  N G  +Q+ DDL+D 
Sbjct: 178 TGCLIKASVELATIYANANDLLRKNLVDFSANFGRAYQIYDDLVDV 223


>gi|91209490|ref|YP_539476.1| geranyltranstransferase [Escherichia coli UTI89]
 gi|218557330|ref|YP_002390243.1| geranyltranstransferase [Escherichia coli S88]
 gi|237707585|ref|ZP_04538066.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
 gi|91071064|gb|ABE05945.1| geranyltranstransferase [Escherichia coli UTI89]
 gi|218364099|emb|CAR01764.1| geranyltranstransferase [Escherichia coli S88]
 gi|222032216|emb|CAP74955.1| Geranyltranstransferase [Escherichia coli LF82]
 gi|226898795|gb|EEH85054.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
 gi|294493422|gb|ADE92178.1| geranyltranstransferase [Escherichia coli IHE3034]
 gi|307628110|gb|ADN72414.1| geranyltranstransferase [Escherichia coli UM146]
 gi|312944998|gb|ADR25825.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315289864|gb|EFU49254.1| polyprenyl synthetase [Escherichia coli MS 110-3]
 gi|323952967|gb|EGB48835.1| polyprenyl synthetase [Escherichia coli H252]
 gi|323958614|gb|EGB54317.1| polyprenyl synthetase [Escherichia coli H263]
          Length = 299

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|324114640|gb|EGC08608.1| polyprenyl synthetase [Escherichia fergusonii B253]
          Length = 299

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPILDKYAESIGLAFQVQDDILDVVGD 231


>gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7]
 gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7]
          Length = 297

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 7/197 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMD 96
           +L A+ Y+L  GGK++R  LV E   +     +  + +V  ++E IH YSLIHDDLP MD
Sbjct: 34  VLEAMEYSLTAGGKRLRPILVLEFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPCMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNI 154
           N   RRGKP+ H  + E  A++AG+ L T AFE+I+    +   +  + +ML   L+  I
Sbjct: 94  NDDFRRGKPSCHKAFSEDIALLAGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSKAI 153

Query: 155 GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ++D+  ++E ID   +  +Q  KTGAL+  AC  G +++   +        
Sbjct: 154 GTDGMIGGQVIDLETENEVIDIETLNRLQSCKTGALIEAACVMGVVLSGKMEYIPAAAD- 212

Query: 213 FGENLGIIFQLADDLLD 229
           + + +G  FQ+ DD+LD
Sbjct: 213 YAQAMGRAFQIVDDILD 229


>gi|218549919|ref|YP_002383710.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
 gi|218357460|emb|CAQ90099.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
          Length = 299

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|110640682|ref|YP_668410.1| geranyltranstransferase [Escherichia coli 536]
 gi|191173497|ref|ZP_03035024.1| geranyltranstransferase [Escherichia coli F11]
 gi|300997392|ref|ZP_07181732.1| polyprenyl synthetase [Escherichia coli MS 200-1]
 gi|110342274|gb|ABG68511.1| geranyltranstransferase [Escherichia coli 536]
 gi|190906206|gb|EDV65818.1| geranyltranstransferase [Escherichia coli F11]
 gi|300304211|gb|EFJ58731.1| polyprenyl synthetase [Escherichia coli MS 200-1]
 gi|324010681|gb|EGB79900.1| polyprenyl synthetase [Escherichia coli MS 60-1]
          Length = 299

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
           Ice1]
 gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
           Ice1]
          Length = 296

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 120/207 (57%), Gaps = 18/207 (8%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+L  GGK++R  LV         +  + +    A+E IH YSLIHDDLP+MD+  +
Sbjct: 35  AMRYSLFAGGKRLRPVLVLAGCRAVGGDEESVMAAACALEMIHTYSLIHDDLPAMDDDDL 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--------SPKTQLKDNIRSQLMLSLTH 152
           RRG PT H+ + E TAI+AG+GLLT AF +++        SP   L      Q++  L  
Sbjct: 95  RRGMPTNHVVFGEATAILAGDGLLTRAFGVLAEEGLRCGRSPALVL------QVIAELAD 148

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G  GM+GGQ++D++ E   ID   +  I   KTGAL+  +   GA++   S  + E L
Sbjct: 149 AAGSMGMIGGQVMDMESENKQIDVATMAYIHAHKTGALIRASLRIGALLGGGSVEQVEAL 208

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPKK 237
             +G++LG+ FQ+ DDLLD + D P+K
Sbjct: 209 SRYGDHLGLAFQITDDLLDIQGD-PEK 234


>gi|312112946|ref|YP_004010542.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218075|gb|ADP69443.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 308

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 5/197 (2%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  ++R++LL   K++R+ L    A         AL +  A+E IH  SLI DDLP M
Sbjct: 30  DPLQGSLRHSLLAPAKRVRAVLTLVAARELGGRESDALDLACAVEMIHTSSLILDDLPCM 89

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRG P+ H  + E TAI+A  GL+  A+  +++   +L  + R++ +  L  ++G
Sbjct: 90  DNAATRRGIPSNHRVFGEATAILASIGLMNRAYG-VAAASAKLSADQRAEAVGVLEWSVG 148

Query: 156 LQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           L+G++ GQ  D+ D    ++E Q+  +   KTGAL   A E GAI+A+ +Q  +  +R F
Sbjct: 149 LEGLVRGQHDDLADYRATMNEAQLETMYAQKTGALFAAAAECGAIVAN-NQAARPAMRKF 207

Query: 214 GENLGIIFQLADDLLDC 230
           G +LG+ FQ+ DD+LD 
Sbjct: 208 GLDLGVGFQILDDVLDA 224


>gi|238917015|ref|YP_002930532.1| geranyltranstransferase [Eubacterium eligens ATCC 27750]
 gi|238872375|gb|ACR72085.1| geranyltranstransferase [Eubacterium eligens ATCC 27750]
          Length = 297

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 126/225 (56%), Gaps = 7/225 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR-V 75
             ++D++L+     +T  + ++  ++ Y++  GGK++R  L+ E   L   N    +   
Sbjct: 13  VFINDIILRYLPE-ETGLDKKIRESMNYSVNAGGKRVRPMLMLEVYKLCGGNDCQVVYPF 71

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+ECIH YSL+HDDLP+MDN   RRG+ T H  + E   I+AG+GLL  A+EI++   
Sbjct: 72  MAALECIHSYSLVHDDLPAMDNDDYRRGRLTTHKVFGEDFGILAGDGLLNLAYEIMAEAL 131

Query: 136 TQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCF 191
              + +I  +++ M  +    G++GM+GGQ +D++     + E Q+  I ++KTGAL+  
Sbjct: 132 VSGEGDIETKAKAMEVIARKAGIKGMVGGQAVDVELTGRTLSEEQLDFIFRLKTGALIEA 191

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A  +GA +A       ++L      +G  FQ+ DD+LD    L +
Sbjct: 192 AFLAGAYLAGCDDETADKLCRAASLIGFAFQIRDDILDVTSSLEE 236


>gi|160947156|ref|ZP_02094323.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270]
 gi|158446290|gb|EDP23285.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270]
          Length = 282

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 111/192 (57%), Gaps = 4/192 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           +GGK+IR+ L+ E   +       A+    A+E IH YSL+HDDLP MD+   RRG  +V
Sbjct: 39  VGGKRIRAILLLEAFKICRDISDIAIDFSVALELIHNYSLVHDDLPEMDDDKFRRGVLSV 98

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLS--LTHNIGLQGMLGGQ 163
           + +Y +  A++ G+ LL  A  I+     QL+  D I++ +  S  + ++ G+ GM+ GQ
Sbjct: 99  YGKYGQSNAVLVGDELLNNANLIMFKAIKQLENIDEIKNAISASEIILNSSGINGMVYGQ 158

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            LD+++   + + +  I  +KTG L   A  +GA +  AS N+   L  + +NLG++FQL
Sbjct: 159 FLDLENNVENLSDIEKINSLKTGELFKAAILAGAKLGGASDNDLAHLEIYAKNLGLVFQL 218

Query: 224 ADDLLDCEEDLP 235
            DDL D +ED+ 
Sbjct: 219 QDDLFDYDEDVE 230


>gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
 gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
          Length = 294

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           SH+   +N  L  ++ Y+L  GGK++R  L+     ++       +    AIE IH YSL
Sbjct: 25  SHLDIPNN--LKESMLYSLNAGGKRLRPILILASYEVYGKTLDKVMSSAVAIEMIHTYSL 82

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP+MD+   RRGK T H Q++E TAI+AG+ LLTY+F++ISS      D  + +L+
Sbjct: 83  IHDDLPAMDDDDYRRGKLTNHKQFNEATAILAGDALLTYSFQLISSDDLLTSDE-KVELI 141

Query: 148 LSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             L+   G  GM+ GQ+LD++ E   +   ++  I  +KTG L+ FA  +GA +  A+ N
Sbjct: 142 RILSEASGPAGMVAGQILDMEAEKQAVTLEEMEEIHALKTGELIRFAIIAGAYLGGATDN 201

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + L  +   LG+IFQ+ DD+LD   D  K
Sbjct: 202 QLKHLTDYAYYLGLIFQVQDDILDITGDASK 232


>gi|22124916|ref|NP_668339.1| geranyltranstransferase [Yersinia pestis KIM 10]
 gi|45440604|ref|NP_992143.1| geranyltranstransferase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108808661|ref|YP_652577.1| geranyltranstransferase [Yersinia pestis Antiqua]
 gi|108811077|ref|YP_646844.1| geranyltranstransferase [Yersinia pestis Nepal516]
 gi|145600070|ref|YP_001164146.1| geranyltranstransferase [Yersinia pestis Pestoides F]
 gi|149364978|ref|ZP_01887013.1| geranyltranstransferase [Yersinia pestis CA88-4125]
 gi|162421705|ref|YP_001607439.1| geranyltranstransferase [Yersinia pestis Angola]
 gi|165926609|ref|ZP_02222441.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165935882|ref|ZP_02224452.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011123|ref|ZP_02232021.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213125|ref|ZP_02239160.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398812|ref|ZP_02304336.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421520|ref|ZP_02313273.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423513|ref|ZP_02315266.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470229|ref|ZP_02334933.1| geranyltranstransferase [Yersinia pestis FV-1]
 gi|218930206|ref|YP_002348081.1| geranyltranstransferase [Yersinia pestis CO92]
 gi|229838781|ref|ZP_04458940.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896065|ref|ZP_04511235.1| geranyltranstransferase [Yersinia pestis Pestoides A]
 gi|229899349|ref|ZP_04514492.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901304|ref|ZP_04516426.1| geranyltranstransferase [Yersinia pestis Nepal516]
 gi|270489496|ref|ZP_06206570.1| polyprenyl synthetase [Yersinia pestis KIM D27]
 gi|294504904|ref|YP_003568966.1| geranyltranstransferase [Yersinia pestis Z176003]
 gi|21957753|gb|AAM84590.1|AE013704_7 geranyltranstransferase [Yersinia pestis KIM 10]
 gi|45435461|gb|AAS61020.1| geranyltranstransferase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774725|gb|ABG17244.1| farnesyl-diphosphate synthase [Yersinia pestis Nepal516]
 gi|108780574|gb|ABG14632.1| farnesyl-diphosphate synthase [Yersinia pestis Antiqua]
 gi|115348817|emb|CAL21771.1| geranyltranstransferase [Yersinia pestis CO92]
 gi|145211766|gb|ABP41173.1| farnesyl-diphosphate synthase [Yersinia pestis Pestoides F]
 gi|149291391|gb|EDM41465.1| geranyltranstransferase [Yersinia pestis CA88-4125]
 gi|162354520|gb|ABX88468.1| geranyltranstransferase [Yersinia pestis Angola]
 gi|165916027|gb|EDR34634.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921537|gb|EDR38734.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990123|gb|EDR42424.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205912|gb|EDR50392.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960439|gb|EDR56460.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051316|gb|EDR62724.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057683|gb|EDR67429.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229681233|gb|EEO77327.1| geranyltranstransferase [Yersinia pestis Nepal516]
 gi|229687751|gb|EEO79824.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695147|gb|EEO85194.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700988|gb|EEO89017.1| geranyltranstransferase [Yersinia pestis Pestoides A]
 gi|262362970|gb|ACY59691.1| geranyltranstransferase [Yersinia pestis D106004]
 gi|262366890|gb|ACY63447.1| geranyltranstransferase [Yersinia pestis D182038]
 gi|270338000|gb|EFA48777.1| polyprenyl synthetase [Yersinia pestis KIM D27]
 gi|294355363|gb|ADE65704.1| geranyltranstransferase [Yersinia pestis Z176003]
 gi|320016363|gb|ADV99934.1| geranyltranstransferase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 306

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 5/203 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L+ A+RY A++GGK++R +LV     +F ++        AAIECIH YSLIHDDLP+
Sbjct: 36  NSNLIEAMRYGAVIGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPA 95

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT H+++ E  AI+AG+ L T AF I++ +P   + D  R  +++ L   
Sbjct: 96  MDDDDLRRGQPTCHVKFGEAHAILAGDALQTLAFSILAEAPMPDVADKDRLSMIIELAQA 155

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210
            G  GM  GQ LD++ E   +    +  I + KTGAL+  A   GA  A  A +     L
Sbjct: 156 SGAAGMCAGQALDLEAETRPVLLGDLEQIHRHKTGALIRAAVRLGAQAAGEAGRKTLLSL 215

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             + E +G+ FQ+ DD+LD   D
Sbjct: 216 DRYAEAIGLAFQVQDDILDVIGD 238


>gi|320181597|gb|EFW56512.1| geranyltranstransferase [Shigella boydii ATCC 9905]
          Length = 299

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T      A+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPATAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S S   ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDSDMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|160880644|ref|YP_001559612.1| polyprenyl synthetase [Clostridium phytofermentans ISDg]
 gi|160429310|gb|ABX42873.1| Polyprenyl synthetase [Clostridium phytofermentans ISDg]
          Length = 335

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 40/232 (17%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECA--------------------------SLFNVNHLT 71
           +  A+ Y+LL GGK+IR  ++ E                            S F      
Sbjct: 36  IFDALSYSLLAGGKRIRPIILLETYQALKEQEKGGALRASQLDIINENADFSWFKTLDDI 95

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +   A+E IH YSL+HDDLP+MDN   RRGK T H +Y E   I+AG+ LL  AFE++
Sbjct: 96  VTKFSVALEMIHTYSLVHDDLPAMDNDEYRRGKLTTHAKYGEDMGILAGDALLNGAFELV 155

Query: 132 SSPKTQLKDNIRSQLMLSLTHNI-----------GLQGMLGGQMLDIQ--DEFIDETQVF 178
           +     +KD   S   ++L   +           G+ GM+GGQ++D++     + + ++ 
Sbjct: 156 AEAFANIKDIENSTDAITLYDRVSRAYQMLSSRSGMYGMIGGQVVDVERTGSVLSKEELL 215

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            I ++KTGAL+  +   GAI++ A+Q E  R     + +G+ FQ+ DD+LD 
Sbjct: 216 FIYELKTGALLEASFLIGAILSGANQEELIRFTKIAKKVGLAFQIQDDILDV 267


>gi|326693827|ref|ZP_08230832.1| geranylgeranyl pyrophosphate synthase [Leuconostoc argentinum KCTC
           3773]
          Length = 299

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 17/196 (8%)

Query: 45  YALL-GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           YA+L GGK++R  L     S F       AL++  A+E +H YSL+HDDLP+MDN  +RR
Sbjct: 38  YAVLNGGKRLRPLLTLAVISSFQQATTPQALKLATAVEWVHSYSLVHDDLPAMDNDLLRR 97

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP------KTQLKDNIRSQLMLSLTHNIGL 156
           G+P+VH ++ E  AI+ G+ LLT AFE++++       +T++ D     ++  L H  G 
Sbjct: 98  GQPSVHAKFGEAAAILVGDALLTGAFEVVTTANALAPDETKIPDQTIVTIVQDLAHFSGA 157

Query: 157 QGMLGGQMLDIQD---EFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNE----K 207
            GM+ GQM D+ +       ET   +  I   KT AL+ FA + GA +A   Q +     
Sbjct: 158 AGMVIGQMHDMGNHGQNLQTETDWLLQEIYTPKTAALIQFAAKLGAQLATLQQTQVPEAT 217

Query: 208 ERLRCFGENLGIIFQL 223
           + +  FG + G+ FQ+
Sbjct: 218 QAMTQFGLDFGLAFQI 233


>gi|187931182|ref|YP_001891166.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
           [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187712091|gb|ACD30388.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
           [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 293

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 104/196 (53%), Gaps = 7/196 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LLSA+ Y+   GGK+IR+  V        ++     ++  A+E IH YSLIHDDLP+MDN
Sbjct: 28  LLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDN 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT HI+++E TAI+AG+ L   AFEI+        D ++    L      G  
Sbjct: 88  DTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKL-FAQYCGAS 146

Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           GM+GGQ LDI+ E     I+E Q+    K      +C            SQ E   +R  
Sbjct: 147 GMVGGQQLDIEGENKKLKIEELQILHTNKTAKMFRVCIVLPYILSQNQNSQIEDLLVR-L 205

Query: 214 GENLGIIFQLADDLLD 229
            + +G+ FQ+ DD+LD
Sbjct: 206 SDLIGLCFQIKDDILD 221


>gi|229543903|ref|ZP_04432962.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
 gi|229325042|gb|EEN90718.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
          Length = 289

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 121/203 (59%), Gaps = 8/203 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y+L  GGK+IR  L+    S         ++   A+E +H YSLIHDDLP+MD+
Sbjct: 28  LKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRGMQTACAVEMLHTYSLIHDDLPAMDD 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT H  + E  AI+AG+GLLT++F +I+     L D ++ +L+  L  + G +
Sbjct: 88  DDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIAE-DPGLDDALKVKLIALLAKSAGPE 146

Query: 158 GMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           GM+ GQ+ D++ E     ++E Q   I   KTG L+ F+  +GA++  AS  + E+   F
Sbjct: 147 GMVAGQVADMEGENKTLTLEELQY--IHAHKTGKLLRFSVLAGAMIGGASTEQLEKFGQF 204

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
            ++LG+ FQ+ DD+LD E +  K
Sbjct: 205 ADHLGLAFQIRDDILDIEGEQEK 227


>gi|28897461|ref|NP_797066.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260876421|ref|ZP_05888776.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034]
 gi|28805673|dbj|BAC58950.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308092915|gb|EFO42610.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034]
          Length = 294

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  + N+++++  L+ L  Q            L+ A++Y LL GGK++R FLV 
Sbjct: 1   MQQTLTSFQERNNQQLNLWLEQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           G+ L T AF II+  P +   +N R  ++ +L H+ G  GM  GQ LD+  ++  +   +
Sbjct: 112 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
           +  I + KTGAL+  A + GA+ A     E    L  + + +G+ FQ+ DD+LD   D
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISD 229


>gi|284048214|ref|YP_003398553.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 291

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 103/191 (53%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A          + V A +E IH YSLIHDDLPSMDN   RRG+ T H
Sbjct: 41  GGKRLRPILLMAAADAVGAKGSDFVAVAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQM 164
             + +  A++AG+GLLT AFE++   +      +  +++L +   +    G  GM+GGQ 
Sbjct: 101 KVFGDAMALLAGDGLLTQAFEVMLEQR-----GVDPKVLLEVVRLVAKCAGPTGMVGGQA 155

Query: 165 LDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           LDI  +D+ +   Q+  + + KTGA+   A   GA++  A       +  F    G+ FQ
Sbjct: 156 LDITSEDQQLTLEQMKKLHEAKTGAMFVAAVRGGAMLGGADPETLRIMTHFANLFGLAFQ 215

Query: 223 LADDLLDCEED 233
           + DD+LD E D
Sbjct: 216 ITDDILDVEGD 226


>gi|90420014|ref|ZP_01227923.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336055|gb|EAS49803.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 318

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 4/191 (2%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           AIR ++L  GK++R  +    A     +   A+  G A+E +H  SLI DDLP MD+  +
Sbjct: 41  AIRESVLAPGKRLRPMMAALTAGDLGGDEDVAVDAGCAVEMVHAASLILDDLPCMDDATM 100

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+P  H+ + E  A+++   +L+ A+E+++  +  L    R + +  LT  +G++G++
Sbjct: 101 RRGRPAAHVTHGEDVAVLSAIAILSGAYEMLARVE-GLSPAARLEAVTVLTRAVGVEGLV 159

Query: 161 GGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ  D++    +    ++      KTGAL   A E+GAI A A +  +  LR F   LG
Sbjct: 160 GGQFADLRGGRAERPLHEIAATNGRKTGALFLAAVETGAIAAGAGETTRAHLRGFATELG 219

Query: 219 IIFQLADDLLD 229
             FQL DDLLD
Sbjct: 220 HAFQLLDDLLD 230


>gi|92430262|gb|ABE77350.1| CrtE [Pantoea sp. C1B1Y]
          Length = 303

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 5/195 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A     N   A  L +  A+E +H  SLI DD+P MD+  +RRG
Sbjct: 49  ALATGKRIRPLLLLLAARDLGCNATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRG 108

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT+H QY E  AI+A   LL+ AF ++++ +  L    R+  +  L+H +G+QG++ GQ
Sbjct: 109 RPTIHCQYGEHVAILAAVALLSKAFGVVAAAEG-LTATTRADAVAELSHAVGMQGLVQGQ 167

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             D+   D+      + M    KT  L C + +  +I+A AS   +E+L  F  NLG  F
Sbjct: 168 FKDLSEGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASGEAREQLHRFSLNLGQAF 227

Query: 222 QLADDLLDCEEDLPK 236
           QL DDL D   D  K
Sbjct: 228 QLLDDLTDGMADTGK 242


>gi|261346381|ref|ZP_05974025.1| geranyltranstransferase [Providencia rustigianii DSM 4541]
 gi|282565699|gb|EFB71234.1| geranyltranstransferase [Providencia rustigianii DSM 4541]
          Length = 305

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 116/201 (57%), Gaps = 13/201 (6%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++Y  LLGGK++R FL      +  V+        AA+ECIH YSLIHDDLP+MD+
Sbjct: 38  LAQAMKYGTLLGGKRLRPFLTYAVGEMLGVSQDNLDAPAAAVECIHAYSLIHDDLPAMDD 97

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PT HI++ E  A++AG+ L T+AF+++SS    ++ D  R  ++  L +  GL
Sbjct: 98  DDLRRGQPTCHIKFGEGNAVLAGDALQTFAFQLLSSAAMPEVSDKDRIAMISELAYASGL 157

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER----- 209
            GM GGQ LD+  E   +D   +  I + KTGAL+  A   GA  A     EK R     
Sbjct: 158 AGMCGGQALDLDAEGKRVDLAALERIHQHKTGALIRAAIRLGAYAA----GEKGRQSIAI 213

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  +   +G+ FQ+ DD+LD 
Sbjct: 214 LDQYANAIGLAFQVQDDILDV 234


>gi|325498296|gb|EGC96155.1| geranyltranstransferase [Escherichia fergusonii ECD227]
          Length = 299

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAG 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|323965104|gb|EGB60563.1| polyprenyl synthetase [Escherichia coli M863]
 gi|327254743|gb|EGE66359.1| geranyltranstransferase [Escherichia coli STEC_7v]
          Length = 299

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+EC+H YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECVHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIGGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPILDKYAESIGLAFQVQDDILDVVGD 231


>gi|308095603|ref|ZP_05907188.2| geranyltranstransferase [Vibrio parahaemolyticus Peru-466]
 gi|308125727|ref|ZP_05776964.2| geranyltranstransferase [Vibrio parahaemolyticus K5030]
 gi|308086887|gb|EFO36582.1| geranyltranstransferase [Vibrio parahaemolyticus Peru-466]
 gi|308113754|gb|EFO51294.1| geranyltranstransferase [Vibrio parahaemolyticus K5030]
          Length = 295

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  + N+++++  L+ L  Q            L+ A++Y LL GGK++R FLV 
Sbjct: 2   MQQTLTSFQERNNQQLNLWLEQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 53  ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 112

Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           G+ L T AF II+  P +   +N R  ++ +L H+ G  GM  GQ LD+  ++  +   +
Sbjct: 113 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
           +  I + KTGAL+  A + GA+ A     E    L  + + +G+ FQ+ DD+LD   D
Sbjct: 173 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISD 230


>gi|313496894|gb|ADR58260.1| IspA [Pseudomonas putida BIRD-1]
          Length = 295

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 127/225 (56%), Gaps = 12/225 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  L+ L +  +  +     +RL +A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQAN 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  +  
Sbjct: 67  GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLD 126

Query: 134 P--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189
           P    Q+ D+IR  ++  L    G  GM+GGQ +D+    + +D+  +  + + KTGAL+
Sbjct: 127 PCLSPQI-DSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALI 185

Query: 190 CFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   GA+  A A   + + L+ + + +G+ FQ+ DD+LD E D
Sbjct: 186 EASVRLGALASARAEPAQLDALQTYAQAIGLAFQVQDDILDVESD 230


>gi|258511741|ref|YP_003185175.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 291

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 3/195 (1%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+ Y+L+  GK++R  LV   A  F V     L   AA+E IHCYSLIHDDLP MD
Sbjct: 28  RLKEAMNYSLMADGKRLRPALVIATAETFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMD 87

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT H+ + E  A++AG+ LLT AF +++ P   +    +  ++ +L    G+
Sbjct: 88  DDDLRRGQPTNHVVFGEAMALLAGDALLTEAFHLLARPLEGVPAERQLAMIRTLASRAGV 147

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ +DI+      T   V  I   KT  L+    E G   A      +  L C+G
Sbjct: 148 DGMVGGQAVDIERTGGQGTLQDVEFIHLHKTARLIQACVEIGGYFADLDDQVRWALSCYG 207

Query: 215 ENLGIIFQLADDLLD 229
           E LG+ FQ+ DD+LD
Sbjct: 208 ECLGLAFQMIDDVLD 222


>gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 291

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           L+   + ++ +L  L   T  H       RL  A+ Y+L+  GK++R  LV   A  F V
Sbjct: 5   LEACKEAVNALLARLFEPTGLHA------RLKEAMNYSLMADGKRLRPALVIATAETFGV 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L   AA+E IHCYSLIHDDLP MD+  +RRG+PT H+ + E  A++AG+ LLT A
Sbjct: 59  PRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDALLTEA 118

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKT 185
           F +++ P   +    +  ++ +L    G+ GM+GGQ +DI+      T   V  I   KT
Sbjct: 119 FHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVDFIHLHKT 178

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L+    E G   A      +  L C+GE LG+ FQ+ DD+LD
Sbjct: 179 ARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLD 222


>gi|227878890|ref|ZP_03996795.1| geranyltranstransferase [Lactobacillus crispatus JV-V01]
 gi|256849774|ref|ZP_05555205.1| geranylgeranyl diphosphate  synthase [Lactobacillus crispatus
           MV-1A-US]
 gi|262046527|ref|ZP_06019488.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
           MV-3A-US]
 gi|227861524|gb|EEJ69138.1| geranyltranstransferase [Lactobacillus crispatus JV-V01]
 gi|256713263|gb|EEU28253.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
           MV-1A-US]
 gi|260572976|gb|EEX29535.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
           MV-3A-US]
          Length = 289

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 27/227 (11%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFL-VTECASLFNVNHLTALRV 75
           I+DD L   A H+ ++  D+ +S I  Y+++ GGK++R  L +    +L        +R+
Sbjct: 14  IIDDYL---AKHLASEVKDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKKIEEPEVRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMIQKMKT 185
                   +QL+  +T  +G  GM+GGQ LDI            +FI++     ++ +KT
Sbjct: 131 NS------AQLVELITKAVGPNGMVGGQYLDIDSTNNASVSGDAKFINK-----MEWLKT 179

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+  + E  AI A AS  EK +L  F +  G  +Q+ DDL+D  E
Sbjct: 180 GCLIQASVEMAAIFAKASDIEKVKLIDFAKVFGRSYQIYDDLVDVVE 226


>gi|18143445|dbj|BAB79600.1| crtE [Pantoea agglomerans pv. milletiae]
          Length = 303

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 5/195 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A     N   A  L +  A+E +H  SLI DD+P MD+  +RRG
Sbjct: 49  ALAPGKRIRPLLLLLAARDLGCNATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRG 108

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT+H QY E  AI+A   LL+ AF ++++ +  L    R+  +  L+H +G+QG++ GQ
Sbjct: 109 RPTIHCQYGEHVAILAAVALLSKAFGVVAAAEG-LTATARADAVAELSHAVGMQGLVQGQ 167

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             D+   D+      + M    KT  L C + +  +I+A AS   +E+L  F  NLG  F
Sbjct: 168 FKDLSEGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASGEAREQLHRFSLNLGQAF 227

Query: 222 QLADDLLDCEEDLPK 236
           QL DDL D   D  K
Sbjct: 228 QLLDDLTDGMADTGK 242


>gi|15669051|ref|NP_247855.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
           [Methanocaldococcus jannaschii DSM 2661]
 gi|2497457|sp|Q58270|IDSA_METJA RecName: Full=Bifunctional short chain isoprenyl diphosphate
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyl pyrophosphate synthase; Short=FPP
           synthase; AltName: Full=Geranyltranstransferase
 gi|1591545|gb|AAB98865.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 327

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 120/203 (59%), Gaps = 22/203 (10%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +D+L +A ++ L  GGK+IR +L      L   +    L   AA+E IH Y+LIHDD+  
Sbjct: 32  DDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDDIEEVLPAAAAVELIHNYTLIHDDI-- 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN   RRGKPTVH+ Y E  AI+AG+ L   AFE +S    ++KDN ++  +L +    
Sbjct: 90  MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVS----RIKDNKKAHEVLKILSKA 145

Query: 155 GLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            ++ +  GQ +D++        +E++D     MI+K KTGAL+  +   GA+MA  ++ E
Sbjct: 146 CVE-VCEGQAMDMEFENYYPTMEEYLD-----MIRK-KTGALLEASVGIGAVMADCNEEE 198

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
           +E L+ + + +G+ FQ+ DD+LD
Sbjct: 199 REALKEYAKRIGLTFQIQDDVLD 221


>gi|77409329|ref|ZP_00786032.1| geranyltranstransferase [Streptococcus agalactiae COH1]
 gi|77172061|gb|EAO75227.1| geranyltranstransferase [Streptococcus agalactiae COH1]
          Length = 290

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 10/198 (5%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L+ AI Y++  GGK+IR  ++ E    F V  +     V AA+E IH  SLIHDDLP+MD
Sbjct: 26  LIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAAALEMIHTGSLIHDDLPAMD 85

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG+ T H ++DE TA++AG+ L    F+++   K   K ++  +L+  L+ + G 
Sbjct: 86  NDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVV--KAGFKADVTVRLIELLSMSAGS 143

Query: 157 QGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQMLD++ E     ID+  +  I   KTG L+ +   +  I+A  S+  K +L  
Sbjct: 144 FGMVGGQMLDMKGENKVLSIDDLSLIHIN--KTGRLLAYPFXAAGILAEKSEEVKGKLHQ 201

Query: 213 FGENLGIIFQLADDLLDC 230
            G  +G  FQ+ DD+LD 
Sbjct: 202 AGLLIGHAFQVRDDILDV 219


>gi|266620367|ref|ZP_06113302.1| geranyltranstransferase [Clostridium hathewayi DSM 13479]
 gi|288868039|gb|EFD00338.1| geranyltranstransferase [Clostridium hathewayi DSM 13479]
          Length = 295

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 122/226 (53%), Gaps = 9/226 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+  ++ ++ +++  L     + +T     +L A+ Y++  GGK++R  L+ E   LF  
Sbjct: 7   LETRTREVEAVVERYLPAADGYQKT-----VLDAMNYSVRAGGKRLRPMLMEETYRLFGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AAIE IH  SLIHDDLP MDN  +RRG PT  ++Y    A++AG+ LL YA
Sbjct: 62  SGTVVEPFMAAIEMIHTSSLIHDDLPCMDNDELRRGLPTTWVKYGYDMAVLAGDSLLIYA 121

Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
            E  +      +D  +  + +  L    G+ GM+GGQ +D++  ++ +   ++  I  +K
Sbjct: 122 VETAAKAFALTEDAAVVGRCIGILAQKTGIYGMIGGQTVDVELTNKPVPHEKLDFIYHLK 181

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           TGAL+  +   GA++A A + E   +      +G+ FQ+ DD+LD 
Sbjct: 182 TGALLESSMMIGALLAGADEEETRLVEQMAAAIGLAFQIQDDILDV 227


>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
 gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
          Length = 297

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 128/233 (54%), Gaps = 11/233 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+E    +D  LD  L +      + H      ++RY++  GGK+IR  L+     
Sbjct: 3   LKAYLKERCTLVDEALDRFLPKADELPFSLHK-----SMRYSVFAGGKRIRPILMLAACD 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +   A+    A+E IH YSLIHDDLP+MD+   RRG PT H  + E  AI+AG+ L
Sbjct: 58  AVGGDISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDAL 117

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
           LT AF ++S   P   L      +++  ++H  G  GM+GGQ++D++ E   E  +  +Q
Sbjct: 118 LTEAFILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATVQ 177

Query: 182 KM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +   KTGAL+  + ++GAI+  A +     L  +GE +G+ FQ+ADD+LD E
Sbjct: 178 YIHTHKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIE 230


>gi|229552482|ref|ZP_04441207.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
 gi|258539852|ref|YP_003174351.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
 gi|229314219|gb|EEN80192.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
 gi|257151528|emb|CAR90500.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
          Length = 283

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 110/204 (53%), Gaps = 7/204 (3%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            + T  N  L +A+ Y++  GGK++R  L+    ++++     AL    A+E +H YSLI
Sbjct: 19  QLATVANPHLRAAMAYSVDAGGKRLRPLLLLSIVAMYDGVVAEALPAATALEFVHTYSLI 78

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRG+PT H Q+ E  AI+AG+ LLT AF I+S    Q      + L+ 
Sbjct: 79  HDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDAFAILS----QHYPEKGAALVQ 134

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L    G  GM+ GQ+LD+  E    D   +  + + KTGAL+      G++     + +
Sbjct: 135 ILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEAD 194

Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
           +  L  F    G+ FQ+ DD+ D 
Sbjct: 195 QVALADFAAAFGLGFQIKDDINDV 218


>gi|291544838|emb|CBL17947.1| farnesyl-diphosphate synthase [Ruminococcus sp. 18P13]
          Length = 297

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 117/202 (57%), Gaps = 5/202 (2%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T    ++L A+RY+L  GGK+IR  LV         +   AL+   AIE IH YSLIHD
Sbjct: 29  ETNPQAKVLEAMRYSLEAGGKRIRPLLVLAFCRACGGDVQKALKPALAIEMIHTYSLIHD 88

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MD+   RRG+ + H  +DE TAI+AG+ L    FE++S+  T L    R  L+  L
Sbjct: 89  DLPAMDDDDYRRGRLSCHKAFDEATAILAGDALNVLPFELLST-DTTLPAETRVSLIAEL 147

Query: 151 THNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            +  G +GM+GGQ++DI +E    +D+  +  +   KTGAL+  AC  G ++A A+    
Sbjct: 148 ANAAGAEGMIGGQVIDIANETRTDVDQNNLVNMYAHKTGALIRVACTMGCMVAGANDKML 207

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
                + + LG+ FQ+ DD+LD
Sbjct: 208 TAATEYAQRLGLAFQIVDDILD 229


>gi|300508789|pdb|3NPK|A Chain A, The Crystal Structure Of Geranyltranstransferase From
           Campylobacter Jejuni
 gi|300508790|pdb|3NPK|B Chain B, The Crystal Structure Of Geranyltranstransferase From
           Campylobacter Jejuni
          Length = 291

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+ DN   RRG PT+
Sbjct: 38  GGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAXDNADFRRGIPTL 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL G + GQ +D 
Sbjct: 98  HKSYDETTAILVGDALNTEAFLVLSH--AHLKDEIKIKLIKTLAFNAGLNGXVIGQAIDC 155

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ D
Sbjct: 156 FFEDKRLSLNELEFLHTHKTARLIAAALKXGCEICELNNEESNQIYKLGLKLGLIFQIND 215

Query: 226 DLLDC 230
           D++D 
Sbjct: 216 DIIDV 220


>gi|302387567|ref|YP_003823389.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
 gi|302198195|gb|ADL05766.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
          Length = 298

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 124/225 (55%), Gaps = 9/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L   +K +  +++  L     +  T     +L+A+ Y++  GGK++R  L+ E   LF  
Sbjct: 10  LSARTKEVGLVVETYLPPVEGYQST-----VLAAMDYSVRAGGKRLRPMLMEETYRLFGG 64

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N        AA+E IH  SLIHDDLP MDN  +RRG PT  +++    A++AG+GLL Y+
Sbjct: 65  NGKEIEPFMAAMEMIHTSSLIHDDLPCMDNDTLRRGLPTAWVKFGYDMAVLAGDGLLIYS 124

Query: 128 FEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
            E  +   +   + ++ ++ M  L    G+ GM+GGQ +D++   + I + ++  I ++K
Sbjct: 125 METAAKALSMTDRPDLVARCMGILAEKTGIHGMIGGQTVDVELAGKPIPKEKLHFIYRLK 184

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           TGAL+  +   GA++  A + + + +      LG+ FQ+ DD+LD
Sbjct: 185 TGALLEASMMIGALLGGADERQLKLVENMASCLGMAFQIQDDILD 229


>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
 gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
          Length = 297

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 120/197 (60%), Gaps = 6/197 (3%)

Query: 41  SAIRYALL-GGKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           +A+RYA+L GGK++R  LV   C ++  +    ALR   A+E IH YSL+HDD+P MDN 
Sbjct: 37  AAMRYAVLDGGKRLRPLLVLAACEAVGGLGQ-AALRAACAVELIHAYSLVHDDMPCMDND 95

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRGKPTVH+++ +  A++AG+ L   AFE++ +P+  +   ++++L   L    G  G
Sbjct: 96  VLRRGKPTVHVRFGQAQALLAGDALQALAFELL-TPEDGVPPAMQARLCRLLAQAAGADG 154

Query: 159 MLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           M GGQ +D+    + + + Q+  + ++KTGAL+  +   GA     +   ++ L  +G  
Sbjct: 155 MAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGAACGEPAGVAEQALAQYGAA 214

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQ+ DD+LD  +D
Sbjct: 215 IGLAFQVVDDVLDVTQD 231


>gi|291545449|emb|CBL18557.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus sp. SR1/5]
          Length = 301

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 6/197 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+ Y++  GGK++R  L+ E   LF           AA+E IH +SLIHDDLP++DN
Sbjct: 38  MAEAMNYSMTAGGKRLRPILIRETYELFGGKDKLCEPFMAAMEMIHTHSLIHDDLPALDN 97

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIG 155
              RRG+ T H  Y E   +++G  LL  A+E++ S    T  KD + + + + +    G
Sbjct: 98  DDYRRGRLTTHKVYGEAMGVLSGVALLNRAYEVMLSAFDLTGDKDRVIAAMRI-IADKTG 156

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + GMLGGQ +D++++   ++   +  I K KT AL+  +  +GA++A AS+ E + +   
Sbjct: 157 INGMLGGQSVDVENDGKPLEHKMLDYIYKNKTSALIEASMMTGAVLAGASEKELKVVEQA 216

Query: 214 GENLGIIFQLADDLLDC 230
            EN+G+ FQ+ DD+LD 
Sbjct: 217 AENIGLAFQIQDDILDV 233


>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
 gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
          Length = 295

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 137/237 (57%), Gaps = 20/237 (8%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA-SLFNVNH 69
            ++ ++  LDD L       + +   +L  ++RY+ L+GGK++R  L    A SLF V  
Sbjct: 10  KAEAVNKALDDYL-----PAEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVANSLFGVEE 64

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +   AA+E +H YSLIHDDLP MD+   RRG+   H  + +  A+++G+ LLTYAFE
Sbjct: 65  ERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGDALLTYAFE 124

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDI--QDEFIDETQVFMIQKM 183
           ++    T+L+ +  ++ +L ++  +    G +GM+GGQ  D+  + + +++  +  I + 
Sbjct: 125 LL----TKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIHRY 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           KTGAL+  A  +GAI+  A + E   L  + EN+G+ FQ+ DD+LD    EE L K+
Sbjct: 181 KTGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEKLGKE 237


>gi|67633340|gb|AAY78591.1| predicted geranyltranstransferase [uncultured bacterium
           MedeBAC82F10]
          Length = 299

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 6/199 (3%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           S + +   GGK+IR FL+T   SL  +          A+EC+H +SLIHDDLP+MDN   
Sbjct: 40  SMVYFVKTGGKRIRPFLITTMGSLIGIKSQILNDFALAVECVHLHSLIHDDLPAMDNDDY 99

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGK TVH ++DE TA++AG+     + + +   K+ L  N + + +  L+   GL+G++
Sbjct: 100 RRGKLTVHKKFDEATAVLAGDMFQVLSVKTLVDSKS-LSANQKVEAIQMLSKANGLEGLI 158

Query: 161 GGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ LDI  +   ++ V  I+ M   KTGAL          +   +  + + L+  G+ +
Sbjct: 159 AGQSLDIYMK--KKSSVKDIETMYLLKTGALFSLCFNLLLTVKKLNAQKAKDLKIIGDTI 216

Query: 218 GIIFQLADDLLDCEEDLPK 236
           G IFQ+ DD+LD   D  K
Sbjct: 217 GKIFQVTDDMLDRWGDEKK 235


>gi|26987266|ref|NP_742691.1| polyprenyl synthetase [Pseudomonas putida KT2440]
 gi|24981909|gb|AAN66155.1|AE016243_7 geranyltranstransferase [Pseudomonas putida KT2440]
          Length = 295

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 127/225 (56%), Gaps = 12/225 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  L+ L +  +  +     +RL +A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQAN 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  +  
Sbjct: 67  GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLD 126

Query: 134 P--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189
           P    Q+ D+IR  ++  L    G  GM+GGQ +D+    + +D+  +  + + KTGAL+
Sbjct: 127 PCLSPQI-DSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGALI 185

Query: 190 CFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   GA+  A A   + + L+ + + +G+ FQ+ DD+LD E D
Sbjct: 186 EASVRLGALASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESD 230


>gi|209559666|ref|YP_002286138.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase / Geranylgeranyl pyrophosphate
           synthetase [Streptococcus pyogenes NZ131]
 gi|209540867|gb|ACI61443.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase / Geranylgeranyl pyrophosphate
           synthetase [Streptococcus pyogenes NZ131]
          Length = 221

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 116/199 (58%), Gaps = 6/199 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +   Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDC 230
             G  +G  FQ+ DD+LD 
Sbjct: 201 QAGMLIGHAFQIRDDILDV 219


>gi|315616639|gb|EFU97256.1| geranyltranstransferase [Escherichia coli 3431]
          Length = 299

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 119/208 (57%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ +  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGKANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|118498042|ref|YP_899092.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
           [Francisella tularensis subsp. novicida U112]
 gi|194323267|ref|ZP_03057051.1| geranyltranstransferase [Francisella tularensis subsp. novicida
           FTE]
 gi|208779548|ref|ZP_03246893.1| geranyltranstransferase [Francisella novicida FTG]
 gi|254373397|ref|ZP_04988885.1| geranyltranstransferase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254374860|ref|ZP_04990341.1| geranyltranstransferase [Francisella novicida GA99-3548]
 gi|118423948|gb|ABK90338.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
           [Francisella novicida U112]
 gi|151571123|gb|EDN36777.1| geranyltranstransferase [Francisella novicida GA99-3549]
 gi|151572579|gb|EDN38233.1| geranyltranstransferase [Francisella novicida GA99-3548]
 gi|194322631|gb|EDX20111.1| geranyltranstransferase [Francisella tularensis subsp. novicida
           FTE]
 gi|208744509|gb|EDZ90808.1| geranyltranstransferase [Francisella novicida FTG]
 gi|332678764|gb|AEE87893.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Francisella cf.
           novicida Fx1]
          Length = 293

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 108/198 (54%), Gaps = 11/198 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LLSA+ Y+   GGK+IR+  V        ++     ++  A+E IH YSLIHDDLP+MDN
Sbjct: 28  LLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCDKIAFAVESIHTYSLIHDDLPAMDN 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPT HI+++E TAI+AG+ L   AFEI+        D ++    L      G  
Sbjct: 88  DTLRRGKPTCHIKFNEATAILAGDALQALAFEILQDINYSDIDKLKKINKL-FAQYCGAS 146

Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLR 211
           GM+GGQ LDI+ E     ++E Q+    K    A M  AC     +   +QN +  + L 
Sbjct: 147 GMVGGQQLDIEGENKKLKLEELQILHTNKT---AKMFRACIVLPYILSQNQNSQIEDLLV 203

Query: 212 CFGENLGIIFQLADDLLD 229
              + +G+ FQ+ DD+LD
Sbjct: 204 RLSDLIGLCFQIKDDILD 221


>gi|220904228|ref|YP_002479540.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 298

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 117/200 (58%), Gaps = 6/200 (3%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y+L  GGK++R  L    A+L  +    AL   +AIE IH YSL+HDDLP+MD
Sbjct: 35  RLKDSMLYSLQAGGKRLRPVLCLSAAALCGLPLRDALPFASAIEMIHTYSLVHDDLPAMD 94

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKP+ H  +DE TAI+AG+GLLT AF ++          +R+   L+L    G 
Sbjct: 95  DDDLRRGKPSNHKAFDEATAILAGDGLLTDAFLMMCRSPLAPPRVLRAISELALAA--GS 152

Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            GM+GGQ  D+     + +    +  I  MKTGAL+  +C  GA++A AS  +   +  +
Sbjct: 153 SGMVGGQEWDMIFTGKDLVSIEDLRGIHAMKTGALLRASCVCGAMLAGASDEDLAAIGSY 212

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  LG+ FQ+ADD+LD   D
Sbjct: 213 GAALGVAFQIADDILDVVAD 232


>gi|89901647|ref|YP_524118.1| polyprenyl synthetase [Rhodoferax ferrireducens T118]
 gi|89346384|gb|ABD70587.1| farnesyl-diphosphate synthase [Rhodoferax ferrireducens T118]
          Length = 314

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 117/206 (56%), Gaps = 12/206 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLV---TECAS-----LFNVNHLTALRVGAAIECIHCYSLIH 89
           L++A+RYA+L GGK++R  LV   +E AS       N   + ALR   A+E IH YSL+H
Sbjct: 44  LMAAMRYAVLDGGKRLRPLLVLAASEAASGERPAAANTPEI-ALRAACAVELIHAYSLVH 102

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP MDN  +RRGK TVH+++ E +A++AG+ L   AFE+++     +    ++ L   
Sbjct: 103 DDLPCMDNDVLRRGKATVHVKFGEASAMLAGDALQAMAFELLTPDDDAIPARQQAALCRL 162

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G  GM GGQ +D+    +   E Q+  + ++KTGAL+  +   GA     S   +
Sbjct: 163 LARAAGSAGMAGGQAIDLASVGVALTERQLRQMHRLKTGALLQASVMMGAACGDVSAQAE 222

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +G  +G+ FQ+ DD+LD   D
Sbjct: 223 AALMSYGAAIGLAFQVVDDMLDVTAD 248


>gi|300361959|ref|ZP_07058136.1| geranyltranstransferase [Lactobacillus gasseri JV-V03]
 gi|300354578|gb|EFJ70449.1| geranyltranstransferase [Lactobacillus gasseri JV-V03]
          Length = 288

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 27/231 (11%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL 70
           + +ID  L+D       H+ ++ ++ + S I  Y+++ GGK++R  L    A+L  +N+ 
Sbjct: 11  TPQIDKFLED-------HLASEVDNPIFSKIMSYSVMAGGKRLRPLLF--LATLETLNYK 61

Query: 71  ---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              + LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL   
Sbjct: 62  ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM- 183
            + I+           + L + ++  +G  GM+GGQ LDI    ++ + E  V +I +M 
Sbjct: 122 IQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKEN-VKVIDQME 174

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KTG L+  + +  A+ A AS ++ +RL  F +  G  +Q+ DDL+D  E
Sbjct: 175 WLKTGCLIEASVKMAAVYAGASTDQVDRLDNFSKQFGRSYQIYDDLVDVVE 225


>gi|313897461|ref|ZP_07831004.1| geranyltranstransferase [Clostridium sp. HGF2]
 gi|312957831|gb|EFR39456.1| geranyltranstransferase [Clostridium sp. HGF2]
          Length = 280

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%)

Query: 29  SH-MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           SH + T  + R+  A++Y+L+ GGK+IR  L+      +         V AAIE IH YS
Sbjct: 9   SHCLDTLEHSRVREAMQYSLMAGGKRIRPRLLLAVLRAYGFEETIGYPVAAAIEMIHTYS 68

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDDLP+MDN  +RRG PT H+++ E  AI+AG+ LLT AF   ++     +  +  ++
Sbjct: 69  LIHDDLPAMDNDTLRRGMPTCHVKFGEDVAILAGDALLTQAF--YTAAACTCRAEVLVEI 126

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           +  L+   G  GM+ GQ+ D++ E    ID   + +I   KTG L+       A++A   
Sbjct: 127 LKLLSEFSGANGMILGQIKDLEGEANPGIDHAGLQVIHYYKTGRLLSLPLVCAALLAGHR 186

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
           ++     R  G + G+ FQ+ DD+LD
Sbjct: 187 EDAAVWER-IGADTGLSFQIQDDILD 211


>gi|116618696|ref|YP_819067.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097543|gb|ABJ62694.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 304

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 114/204 (55%), Gaps = 22/204 (10%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L++ ++YA+L GGK++R  L     + F  +   + L+V  AIE +H YSL+HDDLP+MD
Sbjct: 32  LVAMMKYAVLNGGKRLRPLLTLAVVTSFGESITPSILKVATAIEWVHSYSLVHDDLPAMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNI 154
           N   RRGKP+VH  Y E  AI+ G+ LLT AF +I++  +   ++D + ++ +L +T N+
Sbjct: 92  NDMFRRGKPSVHALYGEANAILVGDALLTGAFGVIATANSSCSVEDCLPTEELLLITQNL 151

Query: 155 ----GLQGMLGGQMLDIQDEFIDETQVFM------IQKMKTGALMCFACESGAIMAHASQ 204
               G  GM+ GQ+ D+ D   +E           +  MKT AL+ +    GAI+ H + 
Sbjct: 152 AREAGGSGMVLGQLHDM-DNHTEEQNASTNWLLNDVYSMKTAALIRYTTTLGAILTHQNV 210

Query: 205 N-------EKERLRCFGENLGIIF 221
           N        K+ +  FGE  G+ F
Sbjct: 211 NVEDNHFDPKKAMYDFGEKFGLAF 234


>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
           chinensis]
          Length = 207

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 4/157 (2%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP MDN   RRGKPT H  + E TA++AG+ LL++AFE I+   ++
Sbjct: 2   AMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSK 61

Query: 138 LKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFAC 193
              + R+  ++S L   IG QG++GGQ++DI    D  +D   +  I   KT  L+  + 
Sbjct: 62  TVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSV 121

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            SG I+  A+++E  R+R +   +G++FQ+ DD+LD 
Sbjct: 122 VSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDV 158


>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 309

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 5/200 (2%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + + +  A+RY+LL GGK++R  L      +       A+    A+E IH  SLIHDDLP
Sbjct: 41  YPETIYEAMRYSLLAGGKRVRPILCLATCEMIGGTIEMAMPTACAMEMIHTMSLIHDDLP 100

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152
           +MDN   RRGK T H  Y E  AI+AG+GLL  +F+++++   Q     R+ +++  +  
Sbjct: 101 AMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALSFQLVATQTPQTVPPERTLRVIARMGS 160

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             G  G++GGQ++D+  E    I    +  I   KT AL+  +   G I+A A+  + ++
Sbjct: 161 ASGAPGLVGGQVVDLASEGQSNISLETLNFIHNHKTAALLEASVVCGGIIAGAAPQDIQK 220

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  + +N+G+ FQ+ DD+LD
Sbjct: 221 LTRYSQNIGLAFQIIDDILD 240


>gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205]
 gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205]
          Length = 303

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 123/204 (60%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L +A+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKAAVHHAVMLGGKRVRPALCYAAASLQANQNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFEI+ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDDQAQGTDAAIVLKQMQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   + + ++  I + KTGAL+  A   GA+  ++  ++
Sbjct: 154 LATAS---SKMVCGQVLDLQAEGKHVAQDELENIHRNKTGALIQAAIMMGAVTIYSGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR FG+++G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQFGQSIGLAFQVQDDILD 234


>gi|157165525|ref|YP_001467681.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
           synthase) [Campylobacter concisus 13826]
 gi|112800771|gb|EAT98115.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Campylobacter concisus 13826]
          Length = 299

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 26/207 (12%)

Query: 49  GGKKIRSFLVTECASLFNVNH-LT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK  R+ L+       NV+  LT  A+RV   +E +H YSLIHDDLPSMDN  +RRG P
Sbjct: 36  GGKHFRALLLLGVVE--NVDKSLTQKAMRVALGLEMMHTYSLIHDDLPSMDNASLRRGTP 93

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+H+ YDE TAI+AG+ L T+AF  IS  +  L  + R + +  L+ N G+ GM+ GQ L
Sbjct: 94  TLHVTYDETTAILAGDALNTHAFYEIS--RADLPADTRIKCVEILSQNAGVSGMVLGQAL 151

Query: 166 D-------------------IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           D                   +  + +   ++  +   KT  L+  + + GA++ +  + E
Sbjct: 152 DCFFENTNKEDIKRAKAKFGLSGKMLSLDELVFLHIHKTAKLIAASLKMGAVIVNLDEKE 211

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
            +++   G  LG+ FQ+ DD++D   D
Sbjct: 212 CDKIYDIGLKLGLAFQIQDDIIDLTSD 238


>gi|304384740|ref|ZP_07367086.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284]
 gi|304328934|gb|EFL96154.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284]
          Length = 297

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 123/230 (53%), Gaps = 9/230 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +  E  +R   +++D   +    ++ +H  +L   + Y+   GGK++R  ++     +  
Sbjct: 7   EFNEFVRRSTPLINDHFAELMEKVE-KHQPQLARMMAYSFNAGGKRVRPLILLAILEVLG 65

Query: 67  --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             +N    L V  A+E +H YSLIHDDLP+MDN  +RRG+PT H Q+ E  AI+ G+ LL
Sbjct: 66  EPINP-DVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAILTGDALL 124

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQK 182
           T AF+ +++  T     +++ ++  L    G +GM+ GQ+ DI+      T  Q+  + +
Sbjct: 125 TIAFQWLAA--TGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQLKKLHE 182

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTG ++ F  ++   +A         +  F +N G+ FQ+ DD++D  E
Sbjct: 183 LKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTE 232


>gi|311110938|ref|ZP_07712335.1| farnesyltranstransferase [Lactobacillus gasseri MV-22]
 gi|311066092|gb|EFQ46432.1| farnesyltranstransferase [Lactobacillus gasseri MV-22]
          Length = 288

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 126/230 (54%), Gaps = 25/230 (10%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL 70
           + +ID  L+D       H+ ++ ++ + S I  Y+++ GGK++R  L    A+L  +N+ 
Sbjct: 11  TPQIDKFLED-------HLASEVDNPIFSKIMSYSVMAGGKRLRPLLF--LATLETLNYK 61

Query: 71  ---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              + LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL   
Sbjct: 62  ISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLG 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ--VFMIQK 182
            + I+           + L + ++  +G  GM GGQ LDI    ++ + E    +  ++ 
Sbjct: 122 IQWITEGSNS------AALAIIISQAVGPNGMGGGQYLDIDSTNNDLVKENAKVIDQMEW 175

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTG L+  + +  A+ A AS +E +RL  F +  G  +Q+ DDL+D  E
Sbjct: 176 LKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVE 225


>gi|289522987|ref|ZP_06439841.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503530|gb|EFD24694.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 298

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 121/231 (52%), Gaps = 21/231 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDR----LLSAIRYALL-GGKKIRSFLVTECAS 63
            +   ++IDT L+++L          +ND     L   I Y+LL GGK+IR  L    A 
Sbjct: 10  FESKKEKIDTYLENIL----------NNDEIPEVLCQCIAYSLLNGGKRIRPVLCQITAE 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              ++    L + AAIE  H  SLIHDDLP MDN   RRGK T H  Y E  A++AG+ L
Sbjct: 60  KLGIDPDGVLPLAAAIEMAHTASLIHDDLPCMDNDDYRRGKLTNHKVYGEAMAVLAGDSL 119

Query: 124 LTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           L Y FE+      +L   + NI + L +  +H IG  G+ GGQ LDI  E  +  + F+ 
Sbjct: 120 LAYGFELCLQELPRLGFTQSNILNALKI-FSHAIGPCGICGGQALDITQEGHEGEEEFLW 178

Query: 181 Q--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  ++KT  L+  +  + A +  A +     L  +G +LGI FQ+ DD+LD
Sbjct: 179 KMCELKTATLLRASITASAALVGAGEKTMSCLHNYGTHLGISFQIIDDILD 229


>gi|229592837|ref|YP_002874956.1| geranyltranstransferase [Pseudomonas fluorescens SBW25]
 gi|229364703|emb|CAY52662.1| geranyltranstransferase [Pseudomonas fluorescens SBW25]
          Length = 295

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 10/227 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           +  R++  L+ L +  +  M+     RL  A+RY+++ GGK++R  L             
Sbjct: 9   SQARVNAALEPLFVAPSPEMK-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAE 63

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  
Sbjct: 64  QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGLQSLAFSA 123

Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +  P  + +   +R +++ +L H  G  GM+GGQ +D+      +D+  +  + + KTGA
Sbjct: 124 LLDPALSSVNAELRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQQALEHMHRHKTGA 183

Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  A   GA+ +  A   +   L+ +   +G+ FQ+ DD+LD E D
Sbjct: 184 LIEAAVHLGALASGRAEAPQLAALKTYALAIGLAFQVQDDILDVESD 230


>gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu]
          Length = 294

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 106/200 (53%), Gaps = 5/200 (2%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 31  QLHEAMRYAVLGGGKRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMPCMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH+QYDE TA++ G+ L + AF  ++           + +   L    G 
Sbjct: 91  DDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALAPAQQAALVR-ELALASGS 149

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ +D+    +  T  Q+  + +MKTGAL+  A   GA+     S +    L  +
Sbjct: 150 IGMAGGQAIDLASVGMKLTREQLETMHRMKTGALLRAAVRMGALAGETPSADAMAALDVY 209

Query: 214 GENLGIIFQLADDLLDCEED 233
              +G+ FQ+ DD+LD   D
Sbjct: 210 AAAVGLAFQVVDDILDVTTD 229


>gi|256821709|ref|YP_003145672.1| polyprenyl synthetase [Kangiella koreensis DSM 16069]
 gi|256795248|gb|ACV25904.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069]
          Length = 296

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 10/231 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           +L+    R+  IL+  L    ++ Q+ H      A+RY AL GGK+IR  LV        
Sbjct: 6   QLEHWQDRVFKILNTRLPSDDTNPQSLHQ-----AMRYGALNGGKRIRPTLVYMTGQALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
              +       A+E IHCYSL+HDDLP+MD+  +RRGKPT HIQ+ E TAI+AG+ L T 
Sbjct: 61  AELIDLDSPALAVELIHCYSLVHDDLPAMDDDDLRRGKPTCHIQFGEATAILAGDALHTQ 120

Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183
           AFE ++S P +      + Q++  L    G  GM GGQ +D++   + ID   +  + +M
Sbjct: 121 AFEELASHPFSAKAQPQQLQMIQLLAQASGSLGMGGGQAIDLESTSKIIDLATLEQMHRM 180

Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  +   GA+ A   +Q E++ L  + + +G+ FQ+ DD+LD E D
Sbjct: 181 KTGALIKASVLLGALCAGKLNQLEQDALERYADAIGLAFQVKDDILDIESD 231


>gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13]
          Length = 298

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 4/202 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL ++ Y+L  GGK++R  LV      F       + V  A+E IH YSL+HDDLPSMD+
Sbjct: 35  LLESMNYSLKAGGKRLRPLLVLATLKSFGKPEELGMPVACAVEMIHTYSLVHDDLPSMDD 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
              RRGKPT H  + E  AI+AG+ LLT++FE++       +K      LM  L    G 
Sbjct: 95  DDFRRGKPTNHKVFGEAMAILAGDALLTHSFEVMEDLLNFDVKPMKVVTLMKELAKAAGP 154

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ+ D++ E   +    +  I + KTG L+ F+  +GAI+  A++ +  +L  F 
Sbjct: 155 TGMVGGQVADMEGEGAQLSLQDLEYIHRNKTGKLLGFSIVAGAILGDATEEQISKLEQFA 214

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
           ++LG+ FQ+ DD+LD E D  K
Sbjct: 215 DHLGLAFQIRDDILDIEGDAAK 236


>gi|270290381|ref|ZP_06196606.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4]
 gi|270281162|gb|EFA26995.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4]
          Length = 294

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 123/230 (53%), Gaps = 9/230 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +  E  +R   +++D   +    ++ +H  +L   + Y+   GGK++R  ++     +  
Sbjct: 4   EFNEFVRRSTPLINDHFAELMEKVE-KHQPQLARMMAYSFNAGGKRVRPLILLAILEVLG 62

Query: 67  --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             +N    L V  A+E +H YSLIHDDLP+MDN  +RRG+PT H Q+ E  AI+ G+ LL
Sbjct: 63  EPINP-DVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAILTGDALL 121

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQK 182
           T AF+ +++  T     +++ ++  L    G +GM+ GQ+ DI+      T  Q+  + +
Sbjct: 122 TIAFQWLAA--TGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQLKKLHE 179

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTG ++ F  ++   +A         +  F +N G+ FQ+ DD++D  E
Sbjct: 180 LKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTE 229


>gi|22536677|ref|NP_687528.1| geranyltranstransferase [Streptococcus agalactiae 2603V/R]
 gi|25010613|ref|NP_735008.1| hypothetical protein gbs0544 [Streptococcus agalactiae NEM316]
 gi|76787307|ref|YP_329231.1| geranyltranstransferase [Streptococcus agalactiae A909]
 gi|76799070|ref|ZP_00781262.1| geranyltranstransferase [Streptococcus agalactiae 18RS21]
 gi|77405325|ref|ZP_00782421.1| geranyltranstransferase [Streptococcus agalactiae H36B]
 gi|77412376|ref|ZP_00788686.1| geranyltranstransferase [Streptococcus agalactiae CJB111]
 gi|77414020|ref|ZP_00790192.1| geranyltranstransferase [Streptococcus agalactiae 515]
 gi|22533517|gb|AAM99400.1|AE014214_14 geranyltranstransferase, putative [Streptococcus agalactiae
           2603V/R]
 gi|23094967|emb|CAD46188.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76562364|gb|ABA44948.1| geranyltranstransferase [Streptococcus agalactiae A909]
 gi|76585585|gb|EAO62151.1| geranyltranstransferase [Streptococcus agalactiae 18RS21]
 gi|77159946|gb|EAO71085.1| geranyltranstransferase [Streptococcus agalactiae 515]
 gi|77161564|gb|EAO72565.1| geranyltranstransferase [Streptococcus agalactiae CJB111]
 gi|77176120|gb|EAO78893.1| geranyltranstransferase [Streptococcus agalactiae H36B]
 gi|319744560|gb|EFV96913.1| geranyltranstransferase [Streptococcus agalactiae ATCC 13813]
          Length = 290

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 10/198 (5%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L+ AI Y++  GGK+IR  ++ E    F V  +     V AA+E IH  SLIHDDLP+MD
Sbjct: 26  LIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAAALEMIHTGSLIHDDLPAMD 85

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG+ T H ++DE TA++AG+ L    F+++   K   K ++  +L+  L+ + G 
Sbjct: 86  NDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVV--KAGFKADVTVRLIELLSMSAGS 143

Query: 157 QGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            GM+GGQMLD++ E     ID+  +  I   KTG L+ +   +  I+A  S+  K +L  
Sbjct: 144 FGMVGGQMLDMKGENKVLSIDDLSLIHIN--KTGRLLAYPFVAAGILAEKSEEVKGKLHQ 201

Query: 213 FGENLGIIFQLADDLLDC 230
            G  +G  FQ+ DD+LD 
Sbjct: 202 AGLLIGHAFQVRDDILDV 219


>gi|59802056|ref|YP_208768.1| hypothetical protein NGO1735 [Neisseria gonorrhoeae FA 1090]
 gi|240014983|ref|ZP_04721896.1| hypothetical protein NgonD_10150 [Neisseria gonorrhoeae DGI18]
 gi|240116586|ref|ZP_04730648.1| hypothetical protein NgonPID1_10193 [Neisseria gonorrhoeae PID18]
 gi|240122052|ref|ZP_04735014.1| hypothetical protein NgonPI_09860 [Neisseria gonorrhoeae PID24-1]
 gi|260439653|ref|ZP_05793469.1| hypothetical protein NgonDG_00928 [Neisseria gonorrhoeae DGI2]
 gi|268602255|ref|ZP_06136422.1| geranyltranstransferase [Neisseria gonorrhoeae PID18]
 gi|291042894|ref|ZP_06568635.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2]
 gi|293398096|ref|ZP_06642301.1| geranyltranstransferase [Neisseria gonorrhoeae F62]
 gi|59718951|gb|AAW90356.1| putative geranyltranstransferase [Neisseria gonorrhoeae FA 1090]
 gi|268586386|gb|EEZ51062.1| geranyltranstransferase [Neisseria gonorrhoeae PID18]
 gi|291013328|gb|EFE05294.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2]
 gi|291611359|gb|EFF40429.1| geranyltranstransferase [Neisseria gonorrhoeae F62]
          Length = 298

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L         +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGGAMADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +  +  +  +KTGAL+  A   GA      S  E   L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|313118274|sp|Q9LRR0|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
           chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
           AltName: Full=Dimethylallyltranstransferase 8; AltName:
           Full=Farnesyl diphosphate synthase 8; AltName:
           Full=Farnesyltranstransferase 8; AltName:
           Full=Geranyltranstransferase 8; Flags: Precursor
          Length = 361

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 11/197 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 97  AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 156

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  + E  A++AG+ LL  AFE   ++SS     +  IR+  ++ L   IG +
Sbjct: 157 RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRA--VVELARAIGTK 214

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQ++D+  E ++   V +     I   KT AL+  A   GAIM   ++ E E+LR 
Sbjct: 215 GLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRK 274

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 275 YARCIGLLFQVVDDILD 291


>gi|257466439|ref|ZP_05630750.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917595|ref|ZP_07913835.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691470|gb|EFS28305.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 290

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 6/205 (2%)

Query: 33  TQHNDRLLSA--IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           TQ+N  +  A  ++YA L GGK+IR  L+    SL            AA+E IH YSL+H
Sbjct: 17  TQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAALEMIHSYSLVH 76

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLML 148
           DDLP+MDN   RRG+ T H ++ E   I+ G+ LLT AF + I     ++      +++ 
Sbjct: 77  DDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMIRGSMGKVAAEKILEIVA 136

Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             +   G+ GM+GGQ +D+    + I    +  I + KTG L+        I+  AS  +
Sbjct: 137 LFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLLLPILVACILGDASLEQ 196

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +E L  +G+ +G+ FQ+ DD+LD E
Sbjct: 197 REALESYGKKIGLAFQIKDDILDVE 221


>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
           thaliana]
          Length = 306

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 11/197 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 42  AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 101

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  + E  A++AG+ LL  AFE   ++SS     +  IR+  ++ L   IG +
Sbjct: 102 RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRA--VVELARAIGTK 159

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQ++D+  E ++   V +     I   KT AL+  A   GAIM   ++ E E+LR 
Sbjct: 160 GLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRK 219

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 220 YARCIGLLFQVVDDILD 236


>gi|194099628|ref|YP_002002759.1| IspA [Neisseria gonorrhoeae NCCP11945]
 gi|239999827|ref|ZP_04719751.1| hypothetical protein Ngon3_10168 [Neisseria gonorrhoeae 35/02]
 gi|240017431|ref|ZP_04723971.1| hypothetical protein NgonFA_09768 [Neisseria gonorrhoeae FA6140]
 gi|240081573|ref|ZP_04726116.1| hypothetical protein NgonF_09730 [Neisseria gonorrhoeae FA19]
 gi|240118810|ref|ZP_04732872.1| hypothetical protein NgonPID_10204 [Neisseria gonorrhoeae PID1]
 gi|240124349|ref|ZP_04737305.1| hypothetical protein NgonP_10505 [Neisseria gonorrhoeae PID332]
 gi|240129023|ref|ZP_04741684.1| hypothetical protein NgonS_10439 [Neisseria gonorrhoeae SK-93-1035]
 gi|268595637|ref|ZP_06129804.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02]
 gi|268597669|ref|ZP_06131836.1| geranyltranstransferase [Neisseria gonorrhoeae FA19]
 gi|268604521|ref|ZP_06138688.1| geranyltranstransferase [Neisseria gonorrhoeae PID1]
 gi|268682976|ref|ZP_06149838.1| geranyltranstransferase [Neisseria gonorrhoeae PID332]
 gi|268687403|ref|ZP_06154265.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035]
 gi|193934918|gb|ACF30742.1| IspA [Neisseria gonorrhoeae NCCP11945]
 gi|268549026|gb|EEZ44444.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02]
 gi|268551457|gb|EEZ46476.1| geranyltranstransferase [Neisseria gonorrhoeae FA19]
 gi|268588652|gb|EEZ53328.1| geranyltranstransferase [Neisseria gonorrhoeae PID1]
 gi|268623260|gb|EEZ55660.1| geranyltranstransferase [Neisseria gonorrhoeae PID332]
 gi|268627687|gb|EEZ60087.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035]
 gi|317165116|gb|ADV08657.1| IspA [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 298

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L         +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI+Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +  + + +  +  +  +KTGAL+  A   GA      S  E   L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|257462419|ref|ZP_05626833.1| dimethylallyltransferase [Fusobacterium sp. D12]
 gi|317060083|ref|ZP_07924568.1| geranyltranstransferase [Fusobacterium sp. D12]
 gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12]
          Length = 290

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 6/210 (2%)

Query: 33  TQHNDRLLSA--IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
            Q+N  +  A  ++YA L GGK+IR  L+    +L        L    A+E IH YSL+H
Sbjct: 17  AQYNTPVWIAEGMQYACLQGGKRIRPQLLFMSLALLGKEIALGLPFALALEMIHSYSLVH 76

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLML 148
           DDLP+MDN   RRG+ T H ++ E  AI+ G+ LLT AF + +     ++      +++ 
Sbjct: 77  DDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNAFSVMVRGSMGKVSSEKILEIVA 136

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             +   G+ GM+GGQ +D+  E   I    +  I + KTG L+        I+  AS  +
Sbjct: 137 LFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHKTGRLLLLPILVACILGDASLEQ 196

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++ L  +G N+G+ FQ+ DD+LD E D  +
Sbjct: 197 RKALEIYGRNIGLAFQIKDDILDVEGDFTQ 226


>gi|88704428|ref|ZP_01102142.1| Geranyltranstransferase [Congregibacter litoralis KT71]
 gi|88701479|gb|EAQ98584.1| Geranyltranstransferase [Congregibacter litoralis KT71]
          Length = 269

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 118/203 (58%), Gaps = 10/203 (4%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHCYSLIHDDLPS 94
           RL  A  Y+L + GK++R  L+   A     +   AL      AIE IH YSLIHDDLP+
Sbjct: 5   RLNDARSYSLNIPGKRLRPQLLEASARATGNDRAEALAGPSAEAIELIHTYSLIHDDLPA 64

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PT+H+ +DE TAI+ G+GL   AFE+I++   +L    R +L+  L    
Sbjct: 65  MDDDDLRRGRPTLHVAFDEATAILVGDGLQAKAFELIANDD-ELSTEQRVRLIARLAKAA 123

Query: 155 GLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           G  GM+GGQ LDI+    D  +D+ +   I  +KTGAL+  A   G I+ +A+  +   L
Sbjct: 124 GFDGMVGGQGLDIEATNKDLSLDDLK--NIHALKTGALITAALVMGGIVGNATDAQLATL 181

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
              GE +G+ FQ+ DD++D   D
Sbjct: 182 ETVGEKIGLAFQIIDDVIDVRSD 204


>gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 301

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 128/232 (55%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L +    ++  + + +    ++ Q  H      A+ YA+  GGK++R  LV E A +  
Sbjct: 11  ELADKKAYVEKFMREFMPPENAYPQVIHR-----AMHYAVFNGGKRLRPILVLESAQVVG 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   AL V  A+E IH YSL+HDDLP+MD+  +RRGKPT H  + E  AI+ G+ LLT 
Sbjct: 66  KDLTRALPVACAMEMIHSYSLVHDDLPAMDDDDLRRGKPTCHKVFGEANAILTGDALLTL 125

Query: 127 AFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183
           AFEI++  +    ++    ++++      +G  GM+GGQ+LD++ E  D T  F ++ + 
Sbjct: 126 AFEIMTACAELPGMEPRYVAKVVRETARAVGSLGMVGGQVLDLELEGKD-TDFFTLKTLH 184

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             KTGAL      +GA++        + L  + EN G+ FQ+ DD+LD E D
Sbjct: 185 SKKTGALFRACLRAGALLFGVEDERLQALTRYAENFGLAFQITDDILDVEGD 236


>gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS]
 gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS]
          Length = 296

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 133/223 (59%), Gaps = 10/223 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R+++ LD  L  T   +Q  H   L  A+RY++  GGK++R  LV    +  NVN ++ 
Sbjct: 12  QRVESALDTWLPMTT--IQPIH---LHEAMRYSVFNGGKRVRPLLVYLTGAALNVNPISL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               +A+E IH YSL+HDDLP+MD+  +RRGKPT H  +DE TAI+AG+ L T AF ++S
Sbjct: 67  DAPASAVELIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFYVLS 126

Query: 133 SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189
                Q  D  R +++ +L    G +GM GGQ +D++     ++  ++  +   KTGAL+
Sbjct: 127 HDNNLQNSDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELENMHIHKTGALI 186

Query: 190 CFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCE 231
             + + GA+  +  + N+ E+L  + + +G+ FQ+ DD+LD E
Sbjct: 187 RASVKMGALACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVE 229


>gi|117622682|ref|YP_851595.1| geranyltranstransferase [Escherichia coli APEC O1]
 gi|115511806|gb|ABI99880.1| geranyltranstransferase [Escherichia coli APEC O1]
          Length = 299

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 118/208 (56%), Gaps = 13/208 (6%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER- 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+      GA+    S  +K R 
Sbjct: 148 ASGIAGMCGGQALDLDAEGKRVPLDALERIHRHKTGALIRATVRLGAL----SAGDKGRR 203

Query: 210 ----LRCFGENLGIIFQLADDLLDCEED 233
               L  + E++G+ FQ+ DD+LD   D
Sbjct: 204 ALPVLDKYAESIGLAFQVQDDILDVVGD 231


>gi|15231869|ref|NP_188069.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
          Length = 284

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 115/197 (58%), Gaps = 11/197 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 20  AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 79

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  + E  A++AG+ LL  AFE   ++SS     +  IR+  ++ L   IG +
Sbjct: 80  RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRA--VVELARAIGTK 137

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQ++D+  E ++   V +     I   KT AL+  A   GAIM   ++ E E+LR 
Sbjct: 138 GLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRK 197

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 198 YARCIGLLFQVVDDILD 214


>gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 295

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEGLFQAPSPEL-----TRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ + HA Q     L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESD 230


>gi|300690860|ref|YP_003751855.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum PSI07]
 gi|299077920|emb|CBJ50559.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum PSI07]
          Length = 299

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 14/204 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+RYA LG GK++R  LV    +L   +      V  A+E IH YSL+HDD+P MD
Sbjct: 32  RLHAAMRYASLGAGKRVRPLLVHAAGALGEASPDALDGVSCAVEMIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151
           +  +RRG+PTVH  YDE TA++AG+ L T AF +++     SP T      R+ L+  L 
Sbjct: 92  DDDLRRGRPTVHRAYDEATALLAGDALQTQAFIMLAELGAVSPAT------RAVLVGELA 145

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM GGQ +D+Q   +  +Q  +  + +MKTGAL+  +   GA+ A  +    E+
Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQEALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  +   +G+ FQ+ DD+LD   D
Sbjct: 206 VDAYAGAVGLAFQVVDDILDVTAD 229


>gi|257452580|ref|ZP_05617879.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317059120|ref|ZP_07923605.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684796|gb|EFS21631.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 290

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 6/205 (2%)

Query: 33  TQHNDRLLSA--IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           TQ+N  +  A  ++YA L GGK+IR  L+    SL            AA+E IH YSL+H
Sbjct: 17  TQYNTPVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGKERDLGFPFAAALEMIHSYSLVH 76

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLML 148
           DDLP+MDN   RRG+ T H ++ E   I+ G+ LLT AF + +     ++      +++ 
Sbjct: 77  DDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNAFSVMVRGSIGKVPSEKILEIVA 136

Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             +   G+ GM+GGQ +D+    + I    +  I + KTG L+        I+  AS  +
Sbjct: 137 LFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHKTGRLLLLPILVACILGDASLEQ 196

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +E L  +G+ +G+ FQ+ DD+LD E
Sbjct: 197 REALESYGKKIGLAFQIKDDILDVE 221


>gi|241663625|ref|YP_002981985.1| polyprenyl synthetase [Ralstonia pickettii 12D]
 gi|240865652|gb|ACS63313.1| Polyprenyl synthetase [Ralstonia pickettii 12D]
          Length = 303

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 116/205 (56%), Gaps = 4/205 (1%)

Query: 32  QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T    RL +A+RYA LG GK++R  L     +L + +      V  A+E IH YSL+HD
Sbjct: 26  ETVAPQRLHAAMRYATLGAGKRVRPLLAHAAGALGDASPAALDGVSCAVEMIHAYSLVHD 85

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+P MD+  +RRG+PTVH  YDE TA++ G+ L T AF I+ +    +    R+QL+  L
Sbjct: 86  DMPCMDDDDLRRGRPTVHRAYDEATALLVGDALQTQAF-ILLAELGAVSAPTRAQLVGEL 144

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G  GM GGQ +D+Q   +  +Q  +  + +MKTGAL+  +   GA+ A  +    E
Sbjct: 145 ARASGSLGMAGGQAIDLQSVGVALSQDALEAMHRMKTGALLRASLRMGALCAGLNAAALE 204

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            +  +   +G+ FQ+ DD+LD   D
Sbjct: 205 HVDTYAGAVGLAFQVVDDILDVTAD 229


>gi|323938606|gb|EGB34855.1| polyprenyl synthetase [Escherichia coli E1520]
          Length = 299

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 5/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++  ++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT H+++ E  AI+AG+ L T AF I+S     ++ D  R  ++  L  
Sbjct: 88  AMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELAS 147

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G+ GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+ A          
Sbjct: 148 ASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGCRALPV 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  + E++G+ FQ+ DD+LD   D
Sbjct: 208 LDKYAESIGLAFQVQDDILDVVGD 231


>gi|254262303|emb|CAZ90627.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter pulveris]
          Length = 312

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 12/227 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +LQ   K I+  LD LL       QT+ ND +  A+R A L  GK+IR  L+   A    
Sbjct: 14  ELQSMRKTIENRLDSLL------PQTEENDLVTQAMRDATLAPGKRIRPLLMLLAARDLG 67

Query: 67  VN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               H   L +  A+E IH  SL  DD+P MDN  +RRG+PT+H ++ E  AI+A   LL
Sbjct: 68  CAPAHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGRPTIHRKFGENVAILAAVALL 127

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           + AF ++SS +  L D  R+Q +  L+  +G QG++ GQ  D+++  E      +     
Sbjct: 128 SKAFGVVSSAEG-LSDAGRAQAVSELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTND 186

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KTG L   + +  AI A+AS   + RLR F  + G  FQL DDL+D
Sbjct: 187 LKTGVLFSASLQLAAIAANASVAARNRLRSFALDFGQAFQLLDDLID 233


>gi|242278215|ref|YP_002990344.1| polyprenyl synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121109|gb|ACS78805.1| Polyprenyl synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 296

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 121/196 (61%), Gaps = 13/196 (6%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + LL ++ Y+L+ GGK++R  LV   A +  V     +   A++E IH YSLIHDDLP+M
Sbjct: 29  ENLLESMEYSLMAGGKRLRPVLVLVWAQMLGVKKEAVMPFAASLEMIHTYSLIHDDLPAM 88

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRGKP+ H ++DE TAI+AG+GLLT AF  ++      +  + +  +++   + G
Sbjct: 89  DDDDLRRGKPSNHKKFDEATAILAGDGLLTEAFGFMAKADAPAEYVVEAISLMA--KSAG 146

Query: 156 LQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTGALMCFACESGAIMAH---ASQNEK 207
             GM+GGQ++D+         +DE +V  +  MKTGAL+  AC+SGAI+A    AS+++ 
Sbjct: 147 SPGMVGGQVVDMSYTGRDGVTLDELKV--MHSMKTGALILSACKSGAILAKGAGASEDDV 204

Query: 208 ERLRCFGENLGIIFQL 223
            R   +G  +G+ FQ+
Sbjct: 205 RRAEEYGRLIGVAFQI 220


>gi|238752774|ref|ZP_04614243.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380]
 gi|238709032|gb|EEQ01281.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380]
          Length = 306

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/203 (41%), Positives = 121/203 (59%), Gaps = 5/203 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L+ A+RY A+LGGK++R +LV     +F ++        AAIECIH YSLIHDDLP+
Sbjct: 36  NSDLVKAMRYGAVLGGKRLRPYLVYATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPA 95

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG+PT H+++ E  AI+AG+ L T AF I+S +    + D  R  ++  L H 
Sbjct: 96  MDDDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILSEAAMPDVADKDRLSMIAELAHA 155

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-L 210
            G+ GM GGQ LD++ E   I  T +  I + KTGAL+  A   GA+ A A+  E    L
Sbjct: 156 SGVAGMCGGQALDLEAEARQISLTDLEQIHRHKTGALIRAAVRLGALAAGAAGREALPLL 215

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +   +G+ FQ+ DD+LD   D
Sbjct: 216 DRYANAIGLAFQVQDDILDVIGD 238


>gi|207723747|ref|YP_002254145.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Ralstonia solanacearum MolK2]
 gi|206588951|emb|CAQ35913.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Ralstonia solanacearum MolK2]
          Length = 299

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 14/204 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+RYA LG GK++R  LV    +L   +      V  A+E IH YSL+HDD+P MD
Sbjct: 32  RLHAAMRYATLGAGKRVRPLLVHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151
           +  +RRG+PTVH  YDE TA++ G+ L T AF +++     SP T      R+ L+  L 
Sbjct: 92  DDDLRRGRPTVHRAYDEATALLVGDALQTQAFVVLAELGAVSPVT------RAALVGELA 145

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM GGQ +D+Q   +  +Q  +  + +MKTGAL+  +   GA+ A  +    E+
Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  +   +G+ FQ+ DD+LD   D
Sbjct: 206 VDTYAGAVGLAFQVVDDILDVTAD 229


>gi|300703492|ref|YP_003745094.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum CFBP2957]
 gi|299071155|emb|CBJ42469.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum CFBP2957]
          Length = 299

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 4/199 (2%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+RYA LG GK++R  LV    +L   +      V  A+E IH YSL+HDD+P MD
Sbjct: 32  RLHAAMRYATLGAGKRVRPLLVHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PTVH  YDE TA++ G+ L T AF +++     +    R+ L+  L    G 
Sbjct: 92  DDDLRRGRPTVHRAYDEATALLVGDALQTQAFVVLAELGA-VSSVTRAALVGELARASGS 150

Query: 157 QGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM GGQ +D+Q   +  +Q  +  + +MKTGAL+  +   GA+ A  +    E++  + 
Sbjct: 151 LGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNATALEQVDAYA 210

Query: 215 ENLGIIFQLADDLLDCEED 233
             +G+ FQ+ DD+LD   D
Sbjct: 211 GAVGLAFQVVDDILDVTAD 229


>gi|309800468|ref|ZP_07694624.1| geranyltranstransferase [Streptococcus infantis SK1302]
 gi|308115909|gb|EFO53429.1| geranyltranstransferase [Streptococcus infantis SK1302]
          Length = 291

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 12/225 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  +I Y++  GGK+IR +L+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESILYSVHAGGKRIRPYLLLEVLDSLQVP 57

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 +V AA+E IH  SLIHDDLP+MDN   RRG+ T H  Y E  AI+AG+ L    
Sbjct: 58  ITQEHAQVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKVYGEALAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           + +I+  +  L    +  L+ +L+   G  GM+ GQ+LD++ E   ++  ++  I   KT
Sbjct: 118 YALIA--QADLPSQTKVDLIANLSLASGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           G L+ F  ++  I+A   +N +++L+  GE +G+ FQ+ DD+LD 
Sbjct: 176 GKLLSFPFQAAGIIAGLDENHQKQLKTVGELIGLAFQVRDDVLDV 220


>gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 303

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 123/215 (57%), Gaps = 8/215 (3%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL-TALRVGAAIEC 81
           L++T    ++ H   +L A+ Y+++ GGK++R  L+ E   LF    L + +   AA+E 
Sbjct: 21  LIKTYLPEESGHQKTILEAMNYSMMTGGKRLRPMLMQEMCRLFTGCLLESVIPFMAAVEM 80

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKD 140
           IH  SL+HDDLP MD+  +RRGKP+   ++ E   ++ G+ L+ YAFE  +S  +T +  
Sbjct: 81  IHTSSLVHDDLPCMDDDMMRRGKPSTWAEFGEDIGVLTGDALMMYAFETAASAFETSIDP 140

Query: 141 NIRSQL---MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACES 195
           +  S++   M  L    G+ GM+GGQ +D++     I + ++  I ++KTGAL+  +   
Sbjct: 141 DELSRIGKAMGILARKTGVYGMIGGQTVDVELAGGPIPKDKLDFIYRLKTGALIEASMLI 200

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           GA++  A+  + + +      +G+ FQ+ DD+LD 
Sbjct: 201 GAVLGGAADEDCKIVESLARKIGMAFQIQDDILDV 235


>gi|258543735|ref|ZP_05703969.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826]
 gi|258521019|gb|EEV89878.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826]
          Length = 315

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 123/229 (53%), Gaps = 13/229 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
            L     RI+T L   L    +        RL  A+RYA LGG K++R+ L+   A  F 
Sbjct: 32  PLARYQTRIETALSRALPPAGA--------RLADAMRYATLGGGKRLRAALLYATADDFG 83

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V   +      A+E IH YSLIHDDLP+MD+  +RRG+P+ H  +DE TAI+AG+ L T 
Sbjct: 84  VPPDSVDAAACAVEAIHAYSLIHDDLPAMDDDDLRRGRPSTHRAFDEATAILAGDALNTL 143

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           AF ++++  + L    R   + +L    G  GM+GGQM D+    + +   Q+  I + K
Sbjct: 144 AFALLAN--SPLPPATRLAQIQTLADAAGWAGMIGGQMGDMAATGKTLTLPQLQAIHRGK 201

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+  A   GA+ A         L   GE+LGI +Q+ADD+LD   +
Sbjct: 202 TGALIRAALHLGALPAADYAAHAATLDELGEHLGIAYQIADDILDATAN 250


>gi|227432104|ref|ZP_03914116.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352131|gb|EEJ42345.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 304

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 22/204 (10%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L++ ++YA+L GGK++R  L     + F  +   + L+V  AIE +H YSL+HDDLP MD
Sbjct: 32  LVAMMKYAVLNGGKRLRPLLTLAVVTSFGESITPSILKVATAIEWVHSYSLVHDDLPVMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNI 154
           N   RRGKP+VH  Y E  AI+ G+ LLT AF +I++  +   ++D + ++ +L +T N+
Sbjct: 92  NDMFRRGKPSVHALYGEANAILVGDALLTGAFGVIATANSSCSVEDCLPTEELLLITQNL 151

Query: 155 ----GLQGMLGGQMLDIQDEFIDETQVFM------IQKMKTGALMCFACESGAIMAHASQ 204
               G  GM+ GQ+ D+ D   +E           +  MKT AL+ +    GAI+ H + 
Sbjct: 152 AREAGGSGMVLGQLHDM-DNHTEEQNASTNRLLNDVYSMKTAALIRYTTTLGAILTHQNV 210

Query: 205 N-------EKERLRCFGENLGIIF 221
           N        K+ +  FGE  G+ F
Sbjct: 211 NVEDNHFDPKKAMYDFGEKFGLAF 234


>gi|254518734|ref|ZP_05130790.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912483|gb|EEH97684.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA]
          Length = 291

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 6/209 (2%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +N  +  +  Y+L +GGK+IR  L      L+  N+   + + +AIE IH YSLIHD
Sbjct: 23  KGSYNKIIYDSASYSLNIGGKRIRPILFLLTYGLYKENYKDVIEMASAIEMIHTYSLIHD 82

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LS 149
           DLP MDN  +RRG PT H ++ E  A++AG+ LL  A  ++   K  +K+  ++ L    
Sbjct: 83  DLPCMDNDDLRRGMPTNHKKFGENIAVLAGDMLLNEAMSLM--IKFSIKNGAKALLASRE 140

Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +    G +GM+GGQ++D+ +E   I + ++  +   KTG L+  +  + AI+A A + + 
Sbjct: 141 IAEAAGPEGMIGGQIVDVINEGKLISKEELLYMHSKKTGELIRVSIIAAAILADAPKKDI 200

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           E L  FG  LG+ FQ+ DD+LD   D+ K
Sbjct: 201 EILNDFGLKLGLAFQIKDDILDITGDISK 229


>gi|294101849|ref|YP_003553707.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
 gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
          Length = 300

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 105/200 (52%), Gaps = 9/200 (4%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y+L  GGK++R  L  + A          L +  A+E +H  SLIHDDLP+MD
Sbjct: 35  RLWESMTYSLQAGGKRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLPAMD 94

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS----QLMLSLTH 152
           N  +RRGKPT H+ Y +  AI+AG+ LL +AFE   S K  +   +      Q +     
Sbjct: 95  NDSLRRGKPTNHMIYGDALAILAGDALLAWAFEY--SLKGLMDRGVPPSSIVQALSIFAQ 152

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G  G+ GGQ+LD        +  F+  I   KT  L+  +  +GAI+  ASQ      
Sbjct: 153 AVGPSGICGGQVLDTDPASFTSSLSFVANIALQKTAVLLQASLVTGAILGGASQEIAGAF 212

Query: 211 RCFGENLGIIFQLADDLLDC 230
             +G +LG+ FQ+ DD+LD 
Sbjct: 213 GKYGRHLGLAFQIVDDILDV 232


>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
 gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
          Length = 295

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 127/225 (56%), Gaps = 10/225 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R+D  L+ L +     ++     RL  A+RY+++ GGK++R  LV       N +  +A
Sbjct: 11  QRVDGCLEALFVPPLPQLE-----RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASA 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AFE ++
Sbjct: 66  DGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA 125

Query: 133 SPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
             +   +D  +R ++   L    G  GM+GGQ +D+      +D   + ++ + KTGAL+
Sbjct: 126 QERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALI 185

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + + GA+ +  A  +    L  +   +G+ FQ+ DD+LD E D
Sbjct: 186 EASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESD 230


>gi|254674120|emb|CBA09904.1| geranyltranstransferase [Neisseria meningitidis alpha275]
          Length = 298

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 5/196 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA L GGK++R  LV   + L         +  AAIE IH YSL+HDD+P+MDN  +
Sbjct: 39  AMRYAALDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H++Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G  GM 
Sbjct: 99  RRGKPTCHVKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSAGMA 157

Query: 161 GGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENL 217
           GGQ +D+ +      Q  + Q   +KTGAL+  A   GA+   + S++    L  +   L
Sbjct: 158 GGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKL 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LDCE D
Sbjct: 218 GLAFQVIDDVLDCEAD 233


>gi|86136864|ref|ZP_01055442.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193]
 gi|85826188|gb|EAQ46385.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193]
          Length = 287

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 10/196 (5%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +A+LGGK +R FLV E A L  V+   AL    AIECIH YSL+HDDLP MD+  +RRG 
Sbjct: 36  HAVLGGKMLRGFLVLESARLHGVDAEAALDAAVAIECIHAYSLVHDDLPCMDDDDLRRGL 95

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PT+H ++DE TA++ G+ L T AF++++  K     N   +L+  L    G  GM+ GQM
Sbjct: 96  PTIHKKWDEATAVLTGDALQTLAFDLLADSK--FGPNAL-ELIRLLARAAGRSGMVQGQM 152

Query: 165 LDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           LDI  E         Q+  +Q  KTG L+ ++   G ++A    ++   L  +   LG+ 
Sbjct: 153 LDIDAETASTPLTLEQITRLQDRKTGCLINWSATVGPVIAG---DDSRALWQYATALGLA 209

Query: 221 FQLADDLLDCEEDLPK 236
           FQ+ADD+LD E D  K
Sbjct: 210 FQIADDILDIEGDAEK 225


>gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
 gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
          Length = 300

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 115/203 (56%), Gaps = 6/203 (2%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L  +++Y+L+ GGK++R  LV       +      +    A+E IH YSLIHDDLP+M
Sbjct: 33  ENLYESMKYSLMAGGKRLRPMLVLAVLEALDKPIERGVAFAVALEMIHTYSLIHDDLPAM 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP---KTQLKDNIRSQLMLSLTH 152
           D+  +RRGKPT H  + E TAI+AG+ LLT AF  I+     +T +       L+  L  
Sbjct: 93  DDDDLRRGKPTNHKVFGEATAILAGDALLTRAFAYIAEAYMDRTDVSAATTVNLIAELGK 152

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G  GM+GGQM DI+ E   ++  Q+  I + KTG L+  A   G  +A AS+ + E L
Sbjct: 153 RAGATGMVGGQMADIEGESKRLNLDQLEFIHRHKTGDLLIAALRGGGYLAEASEGQMEAL 212

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +G  +G+ FQ+ DD+L+ E D
Sbjct: 213 TRYGVCIGLAFQIQDDILNVEGD 235


>gi|302670346|ref|YP_003830306.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio
           proteoclasticus B316]
 gi|302394819|gb|ADL33724.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio
           proteoclasticus B316]
          Length = 313

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 125/251 (49%), Gaps = 29/251 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M      +L + +  I+ IL   L +   + +T     ++ A+ Y+LL GGK++R  ++ 
Sbjct: 1   MGNDFNKRLADKAAHIEDILKAFLPKEEGYART-----VIEAMNYSLLAGGKRLRPMMIL 55

Query: 60  ECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           E   LF   + +        AA+E IH YSL+HDDLP+MDN   RRG+ T H  Y    A
Sbjct: 56  EAYKLFAGNDADEKVVYPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHAVYGAGMA 115

Query: 117 IIAGNGLLTYAFEII---SSPKTQLK--DNIRSQLMLS----LTHNIGLQGMLGGQMLDI 167
            +AG+GLL  A+E     +   T L   D   S   L+    L    G+ GM+GGQ  DI
Sbjct: 116 TLAGDGLLNLAYETAINGAMRGTTLSDYDGDNSNRYLAALDILAGKAGIYGMVGGQCADI 175

Query: 168 ---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
                    +DE  D   +  I + KTGAL+  +   GA++  AS  +   +   G N+G
Sbjct: 176 CAENATEIPEDEMKD--TLHYIDENKTGALIEASLMIGAVIGGASAQQVSMMEKIGSNVG 233

Query: 219 IIFQLADDLLD 229
           I FQ+ DD+LD
Sbjct: 234 IAFQIQDDILD 244


>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 378

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 8/194 (4%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L  GK++R  L      L        +    A+E IH  SLI DDLP MDN  +
Sbjct: 117 AMRYAILAAGKRVRPILCLASCELVGGQENATIPAACAVEMIHTMSLIKDDLPCMDNDDL 176

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT    Y E  AI++G  LL+ AFE +++ +   +  + +  +  L  +IG +G++
Sbjct: 177 RRGKPTTDKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWA--VRELARSIGTRGLV 234

Query: 161 GGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GQ +DI  E +D  +V +     I   KT  L+  A   GAI+   S  E E +R F  
Sbjct: 235 AGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFAR 294

Query: 216 NLGIIFQLADDLLD 229
            +G++FQ+ DD+LD
Sbjct: 295 CIGLLFQVVDDILD 308


>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 307

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 117/204 (57%), Gaps = 6/204 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+  A+R++L  GGK++R  L    A     N    + V AA+E IH YSLIHDDLP++D
Sbjct: 42  RVTQAMRHSLFAGGKRLRPILCMTSAEAVGGNKDHVMDVAAALEFIHTYSLIHDDLPALD 101

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNI 154
           +   RRG PT H  +DE TAI+AG+GLLT AFEI+S       L       ++  ++H  
Sbjct: 102 DDDYRRGTPTCHKAFDEATAILAGDGLLTSAFEILSHAADDGLLPAEKVLTIIAGISHAA 161

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+ GQMLDI+ E   +   ++  I   KTGA++  +  SGA +   +  +   L  
Sbjct: 162 GCNGMILGQMLDIEGEHESLTREELEDIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDV 221

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           + +N+G+ FQ+ DD+L+   D PK
Sbjct: 222 YAKNVGLAFQVIDDILNVIGD-PK 244


>gi|237752529|ref|ZP_04583009.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376018|gb|EEO26109.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 287

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 114/187 (60%), Gaps = 5/187 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L+    + + V ++  A     A+E +H YSLIHDDLP+MDN   RRG  T+
Sbjct: 40  GGKRFRPKLLLSIVASYKVENVKLAFAPALALEILHTYSLIHDDLPAMDNAPFRRGCVTL 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H +YDE  AI+AG+GL T AF +I++  ++LK  I+ +L+ SL++N G+ GM+ GQ LD 
Sbjct: 100 HKKYDEALAILAGDGLNTQAFYLIAT--SKLKPKIKIKLIESLSYNGGIYGMVLGQALDC 157

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             + E +   Q+ +I   KT  L+  + E GA++A   +  +  L   G +LG+ FQ+ D
Sbjct: 158 HFEGEKLPLEQLRVIHLNKTAKLIAASFEMGAMIAECDKKTRRSLYQLGLDLGLFFQIRD 217

Query: 226 DLLDCEE 232
           D++D  +
Sbjct: 218 DVIDSTQ 224


>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
          Length = 297

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 16/205 (7%)

Query: 37  DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL  A+RY +LGG K++R  L      L   N         A+E IH YSL+HDDLP M
Sbjct: 32  ERLHEAMRYTVLGGGKRVRPLLAFAAGELNKANEERVTIAAIAVELIHVYSLVHDDLPCM 91

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS------SPKTQLKDNIRSQLMLS 149
           D+  +RRGKPT HI+Y E  A++ G+ L + AF++++      +PK QL      +++  
Sbjct: 92  DDDVLRRGKPTCHIEYGEAIALLTGDSLQSLAFQLLAEYSLADTPKMQL------EMIRR 145

Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNE 206
           L    G +GM GGQ +D+      +   ++  +   KTGAL+  A   GA   +   + +
Sbjct: 146 LAQAAGSRGMAGGQAVDLASVGRTLSLPELEFMHIHKTGALIRAAVMLGAYCGSRLDEAQ 205

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
              L  F + +G+ FQ+ DD+LD E
Sbjct: 206 LAALDHFAKCIGLAFQVVDDVLDAE 230


>gi|149909332|ref|ZP_01897988.1| geranyltranstransferase [Moritella sp. PE36]
 gi|149807649|gb|EDM67597.1| geranyltranstransferase [Moritella sp. PE36]
          Length = 296

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 131/234 (55%), Gaps = 12/234 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L  +  R    ++D L Q  + + T H+ +L +A+ Y LL GGK+IR  +V     +  
Sbjct: 2   QLSNSITRYQGRINDYLQQQINLLPT-HDTQLAAAMEYGLLQGGKRIRPVIVYAVGEMLG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           VN        AAIE IH YSLIHDDLP+MD+  +RRG+PT HI++D  TAI+AG+ L  +
Sbjct: 61  VNLRDLDGPAAAIESIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDHATAILAGDALQPF 120

Query: 127 AFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
           AFE++     +P+ +     R  ++ SLT   G  GM GGQ +D+   D+ I  TQ+  I
Sbjct: 121 AFEMLLDCALAPEAEKN---RFAMLKSLTQASGYSGMCGGQAMDLAATDKQISLTQLEAI 177

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTGAL+  A + G + + H S      L  +   +G+ FQ+ DD+LD   D
Sbjct: 178 HNNKTGALINCAAKLGCLASPHCSIELLAALDKWSNAIGLAFQVQDDILDIISD 231


>gi|222055717|ref|YP_002538079.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
 gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
          Length = 297

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 11/233 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L S L+E  + +D  L+  L        + H      ++RY++  GGK+IR  L+     
Sbjct: 3   LKSYLKERCQLVDDALNRFLPLADDLPASLHK-----SMRYSIFAGGKRIRPILMLAACE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A+    A+E IH YSLIHDDLP+MD+   RRG PT H  + E  AI+AG+ L
Sbjct: 58  AVGGNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
           LT AF ++S+          +  Q++  ++   G +GM+GGQ++D++ E    ID   V 
Sbjct: 118 LTEAFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATVQ 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I   KTGAL+  + +SGA++  AS  + E L  +GE +G+ FQ+ADD+LD E
Sbjct: 178 YIHTHKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIE 230


>gi|254173046|ref|ZP_04879720.1| bifunctional short chain isoprenyl diphosphate synthase
           [Thermococcus sp. AM4]
 gi|214033202|gb|EEB74030.1| bifunctional short chain isoprenyl diphosphate synthase
           [Thermococcus sp. AM4]
          Length = 343

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 125/239 (52%), Gaps = 20/239 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63
           L ++++  +K +D I+ +L+ +       +   +L  A R Y L GGK++R F+V   A 
Sbjct: 7   LFTRIKNLAKDVDKIILELVPE-------KDPKKLYEAARHYPLAGGKRVRPFVVLRAAE 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +   AL   AA+E IH YSL+HDD+  MD   +RRG+PTVH  +    AI+AG+ L
Sbjct: 60  AVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGVNMAILAGDLL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AFE I+  +   +   R   +L  T N     +  GQ LDI+ E  DE  V    KM
Sbjct: 118 FSKAFEAIAKAEVSPEKKARILEVLVKTSN----ELCEGQALDIEFETKDEVTVDEYLKM 173

Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              KTGAL   +   GAI+   ++     L  +G N+GI FQ+ DD+LD    EE L K
Sbjct: 174 ISGKTGALFDGSATIGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEKLGK 232


>gi|302874811|ref|YP_003843444.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
 gi|307690572|ref|ZP_07633018.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
 gi|302577668|gb|ADL51680.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
          Length = 290

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 127/228 (55%), Gaps = 11/228 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ID  L++  +    + +T ++     ++ Y+L +GGK+IR  L     SLF       L 
Sbjct: 10  IDKWLENYFISKDGYEKTIYD-----SMSYSLNIGGKRIRPLLFLYTYSLFKDEIDDVLD 64

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +  AIE IH YSLIHDDLP+MD+  +RRG PT HI+Y +  AI+AG+GLL  A  I+   
Sbjct: 65  IAGAIEMIHTYSLIHDDLPAMDDDDLRRGMPTNHIKYGDAIAILAGDGLLNEAMNIMFQY 124

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFA 192
             + +  +  +    ++ + G  GM+ GQ++DI+ E   I   ++  +   KTGAL+  A
Sbjct: 125 CIESESQLAVKACSYISKSAGAAGMIAGQIVDIESEGKKISIEKLKYMHSKKTGALINAA 184

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
             S AI+A A   E E+L  +G  LG+ FQ+ DD+LD    E  L KK
Sbjct: 185 IVSAAILAGADSTEIEKLSEYGTKLGLAFQIKDDVLDVIGDESKLGKK 232


>gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10]
 gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10]
          Length = 297

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 118/198 (59%), Gaps = 4/198 (2%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  ++ Y+L  GGK+IR  L+               R  AA+E IH YSLIHDDLP+M
Sbjct: 33  DILKESMLYSLNAGGKRIRPVLLLSVLHAAGKPLEAGYRTAAALELIHTYSLIHDDLPAM 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRGKPT H  Y E  AI+AG+GLLT++F +IS  +  L  +++  L+  +T   G
Sbjct: 93  DDDDLRRGKPTNHKVYGEDIAILAGDGLLTHSFNLISKDE-HLSADLKVALIADITDAAG 151

Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +GM+GGQ+ D+Q E  + T  ++  I   KTG L+  +  +G  +A  ++ + + L   
Sbjct: 152 PEGMVGGQVSDMQGEGKELTAEELEAIHHRKTGDLLSVSLMAGGKIAGLNEEDNKYLSLL 211

Query: 214 GENLGIIFQLADDLLDCE 231
           G++LG+ FQ+ DDLLD E
Sbjct: 212 GKHLGLAFQIKDDLLDIE 229


>gi|124003018|ref|ZP_01687869.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
           [Microscilla marina ATCC 23134]
 gi|123991668|gb|EAY31076.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
           [Microscilla marina ATCC 23134]
          Length = 323

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 12/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I T+  D+    A     +H   L   IRY + LGGK++R  LV    SLF+ NH  A+ 
Sbjct: 3   IKTLQTDIHTALAGLQYGEHPVELYEPIRYIMSLGGKRMRPLLVLLGYSLFDDNHQKAMN 62

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              ++E  H ++L+HDD+  MD   +RRGKPT+H +++  T I++G+ +L  A+E++   
Sbjct: 63  AALSVEVFHNFTLVHDDI--MDEAPLRRGKPTIHQKWNTNTGILSGDVMLVQAYELLLDI 120

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCF 191
            +     +  +       N     +  GQ LD+  E ID   E     + ++KT  L+ +
Sbjct: 121 DSAHLKRVIGKF------NRCAAEVCEGQQLDMNFEHIDAVPEADYLNMIRLKTAVLLGY 174

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + E G I+A+A++   + L  FG N+G+ FQL DDLLD   D  K
Sbjct: 175 SLELGGIVANANKVAADLLNGFGVNIGVGFQLMDDLLDVYADAAK 219


>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
 gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
          Length = 287

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 3/199 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           QH  ++  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDL
Sbjct: 19  QHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMPTACALEMIHTMSLIHDDL 78

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRG PT H  + E TA++AG+ LL  AFE ++     +  +   Q +  L  
Sbjct: 79  PCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARNTKNVSSDRVVQALAELGS 138

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G +G++ GQ++DI+ E   +  + +  I   KT  L+  A   GAIM  A     ERL
Sbjct: 139 AVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEAAVVCGAIMGGADATSVERL 198

Query: 211 RCFGENLGIIFQLADDLLD 229
           R +  ++G++FQ+ DD+LD
Sbjct: 199 RKYARSIGLLFQVVDDILD 217


>gi|332295830|ref|YP_004437753.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178933|gb|AEE14622.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 276

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 112/192 (58%), Gaps = 6/192 (3%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPS 94
           D+    I Y++L GGK+IR   +    S  N + +  L+    A+E +HC SLIHDDLP+
Sbjct: 25  DKTKELIIYSVLSGGKRIRPIFLINVVSESNYDTMLGLKEAILALELMHCASLIHDDLPA 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +DN   RRGK T+H +Y E  AI+AG+ L    F I+S+ +     N+  +L+  L+   
Sbjct: 85  IDNDDFRRGKLTLHKKYGEGPAILAGDALQIMPFNILSNIEDT---NLAVKLIKILSDKA 141

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G++GM+GGQ+LDI +   +  Q++ I  +KTGAL   +   G ++      + + L   G
Sbjct: 142 GVKGMIGGQILDISN-IENFEQIYNIMALKTGALFEASLMMGGVVGRLEDKQIKNLEEIG 200

Query: 215 ENLGIIFQLADD 226
           +++G++FQ+ DD
Sbjct: 201 KSIGLLFQILDD 212


>gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786]
          Length = 294

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 10/224 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R++T L   L       +T    +L  A+RYA LGG K++R  L      L   +    
Sbjct: 12  ERVETALGHYL-----PAETVAPAQLHEAMRYAALGGGKRVRPLLCHAAGELTGASEAAL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  ++
Sbjct: 67  NAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDALQSQAFVALT 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
                L  + +  L+  L    G  GM GGQ +D+      +    +  + +MKTGAL+ 
Sbjct: 127 D-AAALPLDRQPALVRELALASGSIGMAGGQAIDLASVGHALSRDALETMHRMKTGALLR 185

Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
            +   GA+       +  R L  +   +G+ FQ+ DD+LD   D
Sbjct: 186 ASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTD 229


>gi|16519830|ref|NP_443950.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
           NGR234]
 gi|2497460|sp|P55539|ISPA_RHISN RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Geranyltranstransferase
 gi|2182498|gb|AAB91752.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
           NGR234]
          Length = 332

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 125/232 (53%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q  +KR++  L  LL     H +T+    L++A+RYA L GGK+ R+ L     +L + 
Sbjct: 37  MQNGAKRVEQALARLLCAE-DHGETE----LMAAMRYATLHGGKRTRALLCLAAGALADT 91

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+ G+ L  +A
Sbjct: 92  PAHILDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHA 151

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185
           F  ++S      DN R  L+  L   +  +G  GGQ +D+    + ++  ++  + +MK 
Sbjct: 152 FLTLASLDAP-GDN-RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMKC 209

Query: 186 GALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ A A       L C    +    G+  Q+ DD+LD   D
Sbjct: 210 GALVRASVRMGALCAIAEDAADATLYCALDHYSACFGLALQVVDDILDATAD 261


>gi|84500607|ref|ZP_00998856.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597]
 gi|84391560|gb|EAQ03892.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597]
          Length = 286

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 119/196 (60%), Gaps = 9/196 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+R+A  GGK++R+FLV E A+L  V    AL   AAIE +H YSL+HDDLP+MD+  +R
Sbjct: 31  AMRHATSGGKRLRAFLVCEGAALHGVAPGPALDAAAAIEAMHAYSLVHDDLPAMDDDDLR 90

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PTVH++++E TAI+ G+ L + AF+++S     L  +    L   +    G  GM+ 
Sbjct: 91  RGQPTVHVKWNEATAILVGDALQSLAFDLLS--HAALPADRVVTLTAGMARAAGGMGMVH 148

Query: 162 GQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ LDI  E   E     Q+  +Q  KTGAL+ ++ ++G IMA A       +  +   L
Sbjct: 149 GQALDIAAETAPEPLSLPQITELQARKTGALIEWSAQAGPIMADADPGP---MGAYARAL 205

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ADD+LD E D
Sbjct: 206 GLAFQIADDILDVEGD 221


>gi|328472529|gb|EGF43392.1| geranyltranstransferase [Vibrio parahaemolyticus 10329]
          Length = 294

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  + N+++++  L+ L  Q            L+ A++Y LL GGK++R FLV 
Sbjct: 1   MQQTLTSFQERNNQQLNLWLEQLPYQ---------EQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFID 173
           G+ L T AF II+    SP     +N R  ++ +L H+ G  GM  GQ LD+  ++  + 
Sbjct: 112 GDALQTLAFTIIADGTLSPSA---ENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVS 168

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
             ++  I + KTGAL+  A + GA+ A     E    L  + + +G+ FQ+ DD+LD   
Sbjct: 169 LAEMEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIIS 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
 gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
          Length = 306

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 113/195 (57%), Gaps = 4/195 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+L GGK++R  LV         N   ALR   A+E IH YSL+HDD+P MDN  +
Sbjct: 47  AMRYAVLDGGKRLRPLLVLAACEAVGGNAQAALRAACAVELIHAYSLVHDDMPCMDNDVM 106

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+ + E  A++AG+ L   AFE++ +P+  +   ++++L   L    G  GM 
Sbjct: 107 RRGKPTVHVPFGEARALLAGDALQALAFELL-TPEDGVPPAMQARLCRELARAAGADGMA 165

Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ +D+      + E Q+  + ++KTGAL+  +   GA+     +     L  +G  +G
Sbjct: 166 GGQAIDLASVGLQLSEDQLRQMHRLKTGALLQASVVMGAVCGQTPEGTLRALSDYGAAMG 225

Query: 219 IIFQLADDLLDCEED 233
           + FQ+ DD+LD  +D
Sbjct: 226 LAFQVVDDVLDVTQD 240


>gi|139473477|ref|YP_001128193.1| geranyltranstransferase [Streptococcus pyogenes str. Manfredo]
 gi|134271724|emb|CAM29957.1| putative geranyltranstransferase [Streptococcus pyogenes str.
           Manfredo]
          Length = 290

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   + AA+E IH  SLIHDDLP
Sbjct: 23  SEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDLAAALEMIHTGSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+  + +L   ++  L+  L+  
Sbjct: 83  AMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIA--QAELNSEVKVALIQELSLA 140

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +  +Q+ +I   KTG L+ F  ++ A++   +   +++L 
Sbjct: 141 SGTFGMVGGQMLDMKGENQSLSLSQLSLIHLNKTGKLLTFPFKAAALVTEQAITVRQQLE 200

Query: 212 CFGENLGIIFQLADDLLDCE---EDL---PKK 237
             G  +G  FQ+ DD+LD     EDL   PKK
Sbjct: 201 QAGMLIGHAFQIRDDILDVTASFEDLGKTPKK 232


>gi|29654557|ref|NP_820249.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493]
 gi|29541825|gb|AAO90763.1| dimethylallyltransferase [Coxiella burnetii RSA 493]
          Length = 267

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 11/200 (5%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   RL  A+ YA++ GGK+IR          F V+         AIE +HCYSL+HDDL
Sbjct: 24  QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+++  K     NIR  L+  L +
Sbjct: 84  PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDK-----NIR--LINVLAN 136

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G  GM GGQ LD++ +  + T  Q+ ++ ++KTGAL   A E GA+ A     ++ ++
Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196

Query: 210 LRCFGENLGIIFQLADDLLD 229
           LR  G  +G+IFQ  DDL D
Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216


>gi|296272236|ref|YP_003654867.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096411|gb|ADG92361.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 286

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 114/184 (61%), Gaps = 5/184 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L+    +  N   + +AL V   +E +H YSL+HDDLP+MD+  +RRG  T+
Sbjct: 37  GGKRFRPMLLLSVVNSKNSLLIKSALPVALGLEMLHTYSLVHDDLPAMDDATLRRGFETL 96

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H +YDEVTAI+ G+ L T AF  I++    L  +++ + +  L+ + G+ GM+ GQ +D 
Sbjct: 97  HKKYDEVTAILVGDALNTEAFNKIAN--APLSSDVKIECIKVLSSDGGIDGMIIGQAIDC 154

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +++ ++ +Q+  +   KT  L+  + + GAI+A+     +E+L  FG ++G++FQ+ D
Sbjct: 155 FFENQKLELSQLEFLHIHKTAKLIAGSLKMGAIIANYDLAIQEKLYNFGIDIGLLFQIQD 214

Query: 226 DLLD 229
           D+LD
Sbjct: 215 DILD 218


>gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
 gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
          Length = 303

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQSNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+   +  ++
Sbjct: 154 LATAS---SKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILD 234


>gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2]
 gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2]
          Length = 303

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 126/228 (55%), Gaps = 13/228 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           D +   L  Q  +H      D L  ++ Y+L  GGK++R  LV   A  F  +   AL V
Sbjct: 18  DAVSSALTEQFPAHWDIP--DVLRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPV 75

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSP 134
             A+E +H YSLIHDDLP+MD+   RRGK T H  Y E  A++AG+ LLT+AF  I+ + 
Sbjct: 76  ACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYCIVQAG 135

Query: 135 KTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGAL 188
           +      + S  +LS+  ++    G +GM+GGQ+ D+  E       ++  I   KT  L
Sbjct: 136 RLH---GVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYIHLHKTADL 192

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + F+  +G  +A A +++ E LRCFG +LG+ FQ+ DD+LD   D  K
Sbjct: 193 IIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESK 240


>gi|258405879|ref|YP_003198621.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 292

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 115/199 (57%), Gaps = 6/199 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++RY+LL GGK++R  L    A L   +    L   + +ECIH YSL+HDDLP+MD+
Sbjct: 30  LYESMRYSLLAGGKRVRPVLCLVWAELLGGDRQAVLPFASGLECIHTYSLVHDDLPAMDD 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKP+ H Q+ E  AI+AG+GLLT+AFE++       +  +R+  +++        
Sbjct: 90  DDLRRGKPSNHKQFGEAMAILAGDGLLTHAFELMLHADLPAERLVRAAGLVAGAAGASGM 149

Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                Q+ DIQ      T V     +  MKTGAL+  AC SGA++A A + + +R   +G
Sbjct: 150 IGG--QVTDIQLTGSGATNVEDLRAMHGMKTGALLQVACTSGAVLAGAIEEDIQRAATYG 207

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG+ FQ+ADD+LD   D
Sbjct: 208 GALGLAFQVADDILDVVGD 226


>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
 gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
          Length = 309

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 14/203 (6%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +++  A+RY+LL GGK++R  L      L       +L    A+E IH  SLIHDDLP+M
Sbjct: 44  EKIYEAMRYSLLAGGKRLRPILCLTTCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAM 103

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTH 152
           D+   RRGK T H  Y E  AI+AG+ LL+YAFE ++   TQ ++   + LM     L  
Sbjct: 104 DDDDYRRGKLTNHKVYGEDIAILAGDALLSYAFEYVA---TQTRNVDLANLMNVIARLGR 160

Query: 153 NIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            +G  G++GGQ+LD++ E      +D  +   I   KTGAL+  +  SGAI+A A Q + 
Sbjct: 161 TVGAAGLVGGQVLDLESEGKLDVTVDTLKFIHIH--KTGALLETSVVSGAILAGAKQEDV 218

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           ERL  + +N+G+ FQ+ DD+LD 
Sbjct: 219 ERLSRYAQNIGLAFQIIDDILDV 241


>gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
 gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
          Length = 295

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 124/224 (55%), Gaps = 10/224 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL   AFE+++ 
Sbjct: 67  AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
            +   +++     ML+ L    G  GM+GGQ +D+    +  D+  + ++ + KTGAL+ 
Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186

Query: 191 FACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+ +  +++     L  + E +G+ FQ+ DD+LD E D
Sbjct: 187 ASVRLGALASGRAESASLAALERYAEAIGLAFQVQDDILDVESD 230


>gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
          Length = 303

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+   +  ++
Sbjct: 154 LATAS---SKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILD 234


>gi|300173625|ref|YP_003772791.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888004|emb|CBL91972.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811]
          Length = 309

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 25/206 (12%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           + YA+L GGK++R  L     + F      + L+V  A+E +H YSL+HDDLP+MDN   
Sbjct: 36  MSYAVLNGGKRLRPMLTLAVVASFGQKITPSILKVATAVEWVHAYSLVHDDLPAMDNDLF 95

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN----IRSQLMLS--LTHNI 154
           RRGKP+VH +Y E  AI+ G+ LLT AF ++SS  +   +N     +  L+LS  L+++ 
Sbjct: 96  RRGKPSVHARYGEAEAILVGDALLTGAFHVVSSANSTDTENENIAAKELLLLSQMLSYHA 155

Query: 155 GLQGMLGGQMLDI----QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNE--- 206
           G  GM+ GQ+ D+    Q+  ID   +   +   KT AL+ F+  +G+ ++H + N    
Sbjct: 156 GAFGMVIGQVEDMKNHRQEAKIDVNWLLNDVYAPKTAALLGFSAIAGSRLSHVNSNSVAD 215

Query: 207 ---------KERLRCFGENLGIIFQL 223
                       L  FG + G+ FQ+
Sbjct: 216 NSEIAISTTNSALLTFGTDFGMAFQI 241


>gi|162448166|ref|YP_001621298.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A]
 gi|161986273|gb|ABX81922.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A]
          Length = 278

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 121/205 (59%), Gaps = 8/205 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           ++++T    +L +A+ YALLGG K+IR  L         V+    +    A+E IH YSL
Sbjct: 10  AYIETLPESKLKAAMAYALLGGGKRIRPMLGMTLLESKGVDPTPYIEAFLAVEMIHTYSL 69

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP+MD+  +RRGKPTVHI +DE  AI+AG+ LLT +F +++  K  L    + +++
Sbjct: 70  IHDDLPAMDDDTLRRGKPTVHIAFDEAIAILAGDALLTDSFRLVTQNK-YLSTLQKVEII 128

Query: 148 LSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACE-SGAIMAHASQ 204
             ++   G  GM+ GQ+ DI  +D+ +    + ++ ++KT  L+  +   +G I+   S 
Sbjct: 129 DIISSKAGSTGMVFGQIKDIESEDKMVTIEDLNLMYELKTANLIQASLMIAGVIL---SD 185

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
           ++ +     G  +G+IFQ+ DD+L+
Sbjct: 186 HDIKSYEDLGYYIGLIFQIQDDILE 210


>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 303

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQMQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+   +  ++
Sbjct: 154 LATAS---SKMVSGQVLDLQAEGKKITQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILD 234


>gi|49086036|gb|AAT51323.1| PA4043 [synthetic construct]
          Length = 296

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 10/224 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL   AFE+++ 
Sbjct: 67  AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
            +   +++     ML+ L    G  GM+GGQ +D+    +  D+  + ++ + KTGAL+ 
Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186

Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+ +  A       L  + E +G+ FQ+ DD+LD E D
Sbjct: 187 ASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESD 230


>gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1]
 gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2]
 gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
 gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1]
 gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
          Length = 295

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 10/224 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL   AFE+++ 
Sbjct: 67  AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
            +   +++     ML+ L    G  GM+GGQ +D+    +  D+  + ++ + KTGAL+ 
Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186

Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+ +  A       L  + E +G+ FQ+ DD+LD E D
Sbjct: 187 ASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESD 230


>gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
           [Stigmatella aurantiaca DW4/3-1]
 gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase,   (ggppsynthetase) (ggps)
           [Stigmatella aurantiaca DW4/3-1]
 gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 312

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +L E  + +   LD+     A H        L +AIR ALL  GK++R  L  E      
Sbjct: 22  RLHERQQLVARALDEHFPPGAGH--------LTAAIREALLADGKRLRPILCLEACEWVG 73

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   AL    A+E IH  +L+HDDLP+MD+   R G+P +H  + E  AI+AG+ LL +
Sbjct: 74  GSVKAALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDALLVH 133

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           AF +++S +    + + +  +  L   +G  G+ GGQ LD+  Q E +   ++  +   K
Sbjct: 134 AFGLLASTRGVPAERV-TVAIRRLCQALGTTGLAGGQALDVLSQTEGVTPEKLDHVHTWK 192

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T +    A   GA M  A  ++ E L  +G  LG  FQ++DDLLD  ++  K
Sbjct: 193 TASFFEVAIVIGAEMGGADASQVEALARYGMLLGRAFQISDDLLDARDEKGK 244


>gi|72536059|gb|AAZ73127.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
           DC260]
          Length = 301

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 8/202 (3%)

Query: 34  QHNDRLLSAIRYALLG-GKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHD 90
           Q +DR+ +A+R   L  GK+IR  L+   A      +     L +  A+E +H  SLI D
Sbjct: 34  QQSDRVRAAMRAGTLAQGKRIRPLLLLLAARDMGCELTQNGVLDLACAVEMVHAASLILD 93

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           D+PSMDN  +RRG+PTVH ++ E  AI+A   LL+ AFE+I+ +P   L    +S+ +  
Sbjct: 94  DIPSMDNAQMRRGRPTVHREFGENVAILAAIALLSRAFEVIAIAPG--LPAIHKSEAIAE 151

Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+  +GLQG++ GQ  D+ D  +      + M  ++KT  L     +  AI A AS   +
Sbjct: 152 LSAAVGLQGLVQGQFQDLHDGTQSRSPEAIAMTNELKTSVLFRATLQMAAIAADASPQVR 211

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           +RL  F ++LG  FQL DDL D
Sbjct: 212 QRLSFFAQDLGQAFQLLDDLAD 233


>gi|15835530|ref|NP_297289.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum Nigg]
 gi|270285718|ref|ZP_06195112.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum Nigg]
 gi|270289727|ref|ZP_06196029.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum Weiss]
 gi|301337112|ref|ZP_07225314.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum MopnTet14]
 gi|7190945|gb|AAF39709.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum Nigg]
          Length = 292

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 11/205 (5%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L + I YALLGG K++R  LV   A          L    A+E IH  +LI DDLP MDN
Sbjct: 29  LRNPIEYALLGGGKRVRPLLVCLFADSIQ-KRRDVLDTAIAVEYIHTSTLIADDLPCMDN 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH----- 152
             +RRGKP+VH  +DE +A++A   L+  A+  I      LK+ +  Q  +   +     
Sbjct: 88  DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKEVVSVQREIEDAYEDVLD 147

Query: 153 ----NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                 G++G+LGGQ  D+  +   E  V  I   KT AL   AC SG +    ++ +  
Sbjct: 148 LIELRFGVEGVLGGQYEDVFFQSFTEESVINIINKKTSALFEIACVSGWLFGGGAREKTP 207

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            +  F  N GI+FQ+ DDL D  +D
Sbjct: 208 LVIEFARNFGILFQIGDDLADLSQD 232


>gi|253998309|ref|YP_003050372.1| polyprenyl synthetase [Methylovorus sp. SIP3-4]
 gi|253984988|gb|ACT49845.1| Polyprenyl synthetase [Methylovorus sp. SIP3-4]
          Length = 295

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 132/226 (58%), Gaps = 15/226 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL- 73
           R++ +LDD+L   A+++      RL  A+RYA+LGG K    L+   A  F    ++A+ 
Sbjct: 13  RMERVLDDIL--PAANIIPS---RLHGAMRYAVLGGGKRVRALLAHAAGEFCQAPISAVE 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +  AA+E IH YSL+HDD+P MD+  +RRGKP+ H QYD+ TA++ G+ L T AF++++ 
Sbjct: 68  QSAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQTLAFKVLAE 127

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMC 190
           P   L+D  R   M+  L    G +GM GGQ +D+    +D TQ  + Q    KTGAL+ 
Sbjct: 128 PGL-LRDAARQLHMVHILAMASGSRGMAGGQAIDLASVGLDLTQTELEQMHIHKTGALIR 186

Query: 191 FACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEED 233
            A   GA    A   + +R++    + + +G+ FQ+ DD+LD E D
Sbjct: 187 AAALLGA--ESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEAD 230


>gi|154707047|ref|YP_001424692.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111]
 gi|154356333|gb|ABS77795.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111]
          Length = 267

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 116/200 (58%), Gaps = 11/200 (5%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   RL  A+ YA++ GGK+IR          F V+         AIE +HCYSL+HDDL
Sbjct: 24  QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+++      +DN  ++L+  L +
Sbjct: 84  PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA------RDN-NTRLINVLAN 136

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G  GM GGQ LD++ +  + T  Q+ ++ ++KTGAL   A E GA+ A     ++ ++
Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196

Query: 210 LRCFGENLGIIFQLADDLLD 229
           LR  G  +G+IFQ  DDL D
Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216


>gi|161830715|ref|YP_001597105.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
 gi|212212363|ref|YP_002303299.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212]
 gi|161762582|gb|ABX78224.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
 gi|212010773|gb|ACJ18154.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212]
          Length = 267

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 114/200 (57%), Gaps = 11/200 (5%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   RL  A+ YA++ GGK+IR          F V+         AIE +HCYSL+HDDL
Sbjct: 24  QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+++  K        ++L+  L +
Sbjct: 84  PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKN-------TRLINVLAN 136

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G  GM GGQ LD++ +  + T  Q+ ++ ++KTGAL   A E GA+ A     ++ ++
Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196

Query: 210 LRCFGENLGIIFQLADDLLD 229
           LR  G  +G+IFQ  DDL D
Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216


>gi|165921444|ref|ZP_02219632.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
 gi|165916759|gb|EDR35363.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
          Length = 267

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 116/200 (58%), Gaps = 11/200 (5%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   RL  A+ YA++ GGK+IR          F V+         AIE +HCYSL+HDDL
Sbjct: 24  QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+++      +DN  ++L+  L +
Sbjct: 84  PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA------RDN-NTRLINVLAN 136

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G  GM GGQ LD++ +  + T  Q+ ++ ++KTGAL   A E GA+ A     ++ ++
Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196

Query: 210 LRCFGENLGIIFQLADDLLD 229
           LR  G  +G+IFQ  DDL D
Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216


>gi|237749332|ref|ZP_04579812.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
 gi|229380694|gb|EEO30785.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
          Length = 297

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 117/196 (59%), Gaps = 6/196 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++RYA+L GGK+IR  LV     LF+   L   R  AA+E IH YSL+HDD+P MDN  +
Sbjct: 39  SMRYAVLDGGKRIRPLLVFATGYLFDAEKLALARAAAAVEMIHAYSLVHDDMPCMDNDVL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+++ E TA++AG+ L   AF ++S+   Q    +  ++M  L+   G  GM 
Sbjct: 99  RRGKPTVHVRFGEATALLAGDALQAQAFVVLSN--QQCDPVLTVEMMRLLSEAAGAAGMC 156

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENL 217
           GGQ +D+    + +   ++  + ++KTGAL+  +   GA  +   ++ EK  L  + + +
Sbjct: 157 GGQAIDLASVGKSLTVNELENMHRLKTGALLTASVFLGAYCSKIPTEQEKNALNAYAKAI 216

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LD   D
Sbjct: 217 GLAFQVVDDILDVTAD 232


>gi|74316898|ref|YP_314638.1| farnesyl-diphosphate synthase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056393|gb|AAZ96833.1| polyprenyl synthetase [Thiobacillus denitrificans ATCC 25259]
          Length = 296

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 3/197 (1%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  L      +            AA+E IH YSL+HDD+P+MD
Sbjct: 33  RLHEAMRYAVLGGGKRVRPLLAFAAGDVTGAAVEQVQHAAAAVELIHAYSLVHDDMPAMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPTVH+++DE TA++ G+ L + AF+I++SP      + +  ++  L    G 
Sbjct: 93  DDALRRGKPTVHVEFDEPTALLVGDALQSLAFDILASPGLAQAASTQLAMVQLLARASGS 152

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +GM GGQ +D+ +  + +D T++  +   KTGAL+  +   GA     S+  +  L  + 
Sbjct: 153 RGMAGGQAIDLANVGKSLDLTELEFMHIHKTGALIRASVLLGAECGTLSEPARTALDHYA 212

Query: 215 ENLGIIFQLADDLLDCE 231
           + +G+ FQ+ DD+LD E
Sbjct: 213 KCIGLAFQVVDDVLDAE 229


>gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
          Length = 295

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 126/225 (56%), Gaps = 10/225 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R+D  L+ L +     ++     RL  A+RY+++ GGK++R  LV       N +   A
Sbjct: 11  QRVDGCLEALFVPPLPQLE-----RLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTDA 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AFE ++
Sbjct: 66  DGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA 125

Query: 133 SPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
             +   +D  +R ++   L    G  GM+GGQ +D+      +D   + ++ + KTGAL+
Sbjct: 126 QAEHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALI 185

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + + GA+ +  A  +    L  +   +G+ FQ+ DD+LD E D
Sbjct: 186 EASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESD 230


>gi|256851326|ref|ZP_05556715.1| geranylgeranyl diphosphate  synthase [Lactobacillus jensenii
           27-2-CHN]
 gi|260660750|ref|ZP_05861665.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           115-3-CHN]
 gi|282933229|ref|ZP_06338616.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
 gi|297206196|ref|ZP_06923591.1| geranyltranstransferase [Lactobacillus jensenii JV-V16]
 gi|256616388|gb|EEU21576.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           27-2-CHN]
 gi|260548472|gb|EEX24447.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           115-3-CHN]
 gi|281302733|gb|EFA94948.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
 gi|297149322|gb|EFH29620.1| geranyltranstransferase [Lactobacillus jensenii JV-V16]
          Length = 288

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 122/227 (53%), Gaps = 22/227 (9%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLT 71
           ++   I+D  L Q   H+ ++  D+  S I  Y+++ GGK++R  L    A+L ++    
Sbjct: 9   QKYQPIIDHYLEQ---HLSSEIEDKKFSQIMAYSVMAGGKRLRPLLF--LATLISLGKEI 63

Query: 72  A---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +RV   IE IH YSLIHDDLP+MDN   RRG  T H ++ E  AI+AG+ LL    
Sbjct: 64  TEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDALLPMGL 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM--IQKM 183
           E I+S +        ++++  + + IG  GM GGQ LDI    ++ + E   F+  ++ +
Sbjct: 124 EWIASAEN-------AEMVAVMANAIGPNGMAGGQYLDIDSTNNDAVKEDNNFINRMEWL 176

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTG L+  + E   I A A    +++L  F  N G  +Q+ DDL+D 
Sbjct: 177 KTGCLIKASVEIATIYAKADDLSRKKLVDFSANFGRAYQIYDDLVDV 223


>gi|157369322|ref|YP_001477311.1| geranyltranstransferase [Serratia proteamaculans 568]
 gi|157321086|gb|ABV40183.1| Polyprenyl synthetase [Serratia proteamaculans 568]
          Length = 306

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/201 (41%), Positives = 120/201 (59%), Gaps = 13/201 (6%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +++A+R+ ALLGGK++R FLV     +F V  N+L A    AA+ECIH YSLIHDDLP+M
Sbjct: 39  MVAAMRHGALLGGKRLRPFLVYTTGQMFGVSLNNLDA--PAAAVECIHAYSLIHDDLPAM 96

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152
           D+  +RRG+PT HI++ E  AI+AG+ L T AF I++    P   L D  R  ++  L  
Sbjct: 97  DDDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILADAEMPDVALCD--RLAMVSELAT 154

Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER 209
             G+ GM GGQ LD+  +D  I    +  I + KTGAL+  A   GA+ A    +    +
Sbjct: 155 ASGVAGMCGGQSLDLEAEDRQIGLEALEQIHRHKTGALIRAAVRLGALAAGEPGRAALVQ 214

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  +   +G+ FQ+ DD+LD 
Sbjct: 215 LDRYAAAIGLAFQVQDDILDV 235


>gi|169794893|ref|YP_001712686.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii AYE]
 gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
 gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB307-0294]
 gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB056]
 gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB058]
 gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB059]
 gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
 gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
 gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii AYE]
 gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
 gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
 gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB307-0294]
 gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
 gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
          Length = 303

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+   +  ++
Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234


>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
 gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
          Length = 315

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 117/205 (57%), Gaps = 3/205 (1%)

Query: 29  SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + +  +  + L  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SL
Sbjct: 39  ASLPPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDPALAMPTAVALEMIHTMSL 98

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP+MD+  +RRG+PT H  Y E  AI+AG+ LLT AFE+++     +      Q++
Sbjct: 99  IHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLQVV 158

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             L+   G  G++GGQ++D++ E   +D   +  I   KTGAL+     +GA++A A  +
Sbjct: 159 AELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGALLRACVITGALIAGADAS 218

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
             + LR +   +G+ FQ+ DD+LD 
Sbjct: 219 RIDSLRTYARGIGLAFQIVDDILDV 243


>gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           ACICU]
 gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
 gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           ACICU]
 gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2]
 gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
          Length = 303

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+   +  ++
Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234


>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
 gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
 gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 303

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+   +  ++
Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234


>gi|309775474|ref|ZP_07670476.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916770|gb|EFP62508.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 282

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 110/196 (56%), Gaps = 7/196 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+  A++Y+L+ GGK++R  L+    + +         + AAIE IH YSLIHDDLP+MD
Sbjct: 21  RVRDAMQYSLMAGGKRVRPKLLLAVLNAYAQEEAIGYPLAAAIEMIHTYSLIHDDLPAMD 80

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG  T H++Y E  AI+AG+GLLTYAF    + KT    +   ++   L+   G 
Sbjct: 81  NDTLRRGMATCHVKYGEDVAILAGDGLLTYAFA--QAMKTACPADELVEICRLLSDYSGA 138

Query: 157 QGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            GM+ GQ+ D++ E    ID   +  I   KTG L+      GA++A   + +       
Sbjct: 139 GGMILGQIKDLEGEANPHIDLQSLQDIHFYKTGKLLTLPLLCGALLA-GHKADLPVWEMI 197

Query: 214 GENLGIIFQLADDLLD 229
           G ++G+ FQ+ DD+LD
Sbjct: 198 GADIGLSFQIQDDILD 213


>gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
 gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
 gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
 gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
          Length = 302

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 117/200 (58%), Gaps = 7/200 (3%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    A+L  N N     R   AIE IHCYSL HDDLP 
Sbjct: 34  EPLKSAVYHAVMLGGKRVRPALCYATAALQPNSNFAAVRRAAVAIEMIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S        +   ++L     +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGVAVDQAVVLRQMQIL 153

Query: 155 GLQG--MLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKER 209
                 M+ GQ++D+Q E   +D++Q+  I + KTGAL+  A    A+ + + +     +
Sbjct: 154 ATASSKMVCGQVMDLQAEGKQVDQSQLENIHRNKTGALIQAAIMMAAVTIFNGTDQAIPQ 213

Query: 210 LRCFGENLGIIFQLADDLLD 229
           LR +G+ +G+ FQ+ DD+LD
Sbjct: 214 LRQYGQAIGLAFQVQDDILD 233


>gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4]
 gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis RH4]
 gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169]
 gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1]
 gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1]
 gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7]
 gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E]
 gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72]
          Length = 348

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 124/239 (51%), Gaps = 23/239 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNV 67
           Q  SK +  +LD +L  ++        + L  A RYA+  GGK++R  LV +   +L   
Sbjct: 54  QWQSKNLPNLLDIILTHSSL------PEPLNKACRYAMSNGGKRVRPLLVLSTFLTLIKT 107

Query: 68  NHLT---------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            H T           R   A+E IH YSLIHDDLP MD+  +RRG+PT HI Y E  A++
Sbjct: 108 GHQTDDLTKKIQMLFRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALL 167

Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE 174
           AG+ L + AFE++     K    D I  +L   L+     + M+ GQMLDI+ E   + +
Sbjct: 168 AGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLS--CRARRMVSGQMLDIKGENQMLSQ 225

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++  I + KTGAL+  A   GAI A    +    L+ +   +G+ FQ+ DD+LD   D
Sbjct: 226 DKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITAD 284


>gi|254516865|ref|ZP_05128923.1| polyprenyl synthetase [gamma proteobacterium NOR5-3]
 gi|219674370|gb|EED30738.1| polyprenyl synthetase [gamma proteobacterium NOR5-3]
          Length = 269

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/154 (43%), Positives = 99/154 (64%), Gaps = 3/154 (1%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP+MD+  +RRG+PT+H+ +DE TAI+ G+GL   AFE+I+S + QL   
Sbjct: 52  IHTYSLIHDDLPAMDDDDMRRGRPTLHVAFDEATAILVGDGLQAKAFELIASEE-QLSAQ 110

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            R  L+  L    G +GM+GGQ LDI+  +  +   Q+  I  +KTGAL+  A   G I+
Sbjct: 111 QRIDLVACLAKAAGFEGMVGGQGLDIEATERTLSVEQLKNIHALKTGALITAALVMGGIV 170

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A+ ++K  L+  G+ +G+ FQ+ DD++D   D
Sbjct: 171 GQANPDQKHILKAVGDKIGLAFQIIDDVIDVRSD 204


>gi|116627949|ref|YP_820568.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus LMD-9]
 gi|116101226|gb|ABJ66372.1| farnesyl-diphosphate synthase [Streptococcus thermophilus LMD-9]
 gi|312278537|gb|ADQ63194.1| Geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus ND03]
          Length = 290

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 10/225 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K+ID  + D   +    + +     L+SAI Y++  GGK+IR  +  +    F +    +
Sbjct: 5   KKIDAAIRDFYQKKTPPVSSD----LISAILYSVDSGGKRIRPLIFLDLLEGFGLELTPS 60

Query: 73  -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
              + A++E IH  SLIHDDLP+MD+   RRG+ T H ++DE TAI+AG+ L    F ++
Sbjct: 61  HFDIAASLEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFALV 120

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           +  +T+L   IR QL+ +L+H  G  GM+GGQMLD++ E   +D +Q+  I + KTG L+
Sbjct: 121 A--QTELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGKLL 178

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            F   +  I+A       E L+  G  +G+ FQ+ DD+LD   D 
Sbjct: 179 TFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADF 223


>gi|315452919|ref|YP_004073189.1| geranyltranstransferase [Helicobacter felis ATCC 49179]
 gi|315131971|emb|CBY82599.1| geranyltranstransferase [Helicobacter felis ATCC 49179]
          Length = 296

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 9/188 (4%)

Query: 49  GGKKIRS--FLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+ R   FL   CA    +  + A   +  A+E +H YSLIHDDLP MDN   RR  P
Sbjct: 47  GGKRFRPKLFLAVLCAFEEKIETIHACFPIALALEVLHTYSLIHDDLPCMDNADTRRYHP 106

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+H  YDE TA + G+GL TYAFE++++    L D ++  L+ +L    G+ GM+ GQ L
Sbjct: 107 TLHKSYDETTATLVGDGLNTYAFELLAT--NSLPDRLKISLITTLAQCGGIGGMVLGQAL 164

Query: 166 D--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLGIIF 221
           D   + + ++  Q+  +  +KT  L+  + + GA++   S   +    L  FG  LG+ F
Sbjct: 165 DCHFEHQTLNLQQLETLHTLKTAKLIAASLKMGALIVCDSLETDISHSLFTFGLKLGLFF 224

Query: 222 QLADDLLD 229
           Q+ DD++D
Sbjct: 225 QVRDDIID 232


>gi|241889564|ref|ZP_04776862.1| geranyltranstransferase [Gemella haemolysans ATCC 10379]
 gi|241863186|gb|EER67570.1| geranyltranstransferase [Gemella haemolysans ATCC 10379]
          Length = 286

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 6/203 (2%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  +I Y+L+  GKKIR          + + +     +  AIE +H YSL+HDDLP M
Sbjct: 30  DILKESITYSLVNDGKKIRPLSFLYLLKFYGIEYSKYFDIALAIELVHTYSLVHDDLPEM 89

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   R GK T H  Y +  A++ G+ +LT AFE++S     +K +++ +L+    +  G
Sbjct: 90  DNDDYRWGKYTNHKVYGQDVAVLTGDAMLTLAFEVLSD--ADVKPDLKVRLIKQFANYSG 147

Query: 156 LQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+ GQ+ D++ +  D    ++  +  +KTG L+    +   ++A+  + + + ++ F
Sbjct: 148 AMGMIAGQIYDVKQKNYDVDADYLRKMHSLKTGRLIELPLDFACLVANKLE-DYDDVKEF 206

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
           G+ LGI +Q+ DD+LD   D  K
Sbjct: 207 GQQLGIAYQIKDDILDYYGDFEK 229


>gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 295

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEGLFQPPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESD 230


>gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 294

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230


>gi|258515780|ref|YP_003192002.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 296

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 133/235 (56%), Gaps = 10/235 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++L++ + ++D  L+  LL  +S  +  H      A+RY++  GGK++R  ++   A   
Sbjct: 5   NELKKIAGQVDAALNRYLLPESSCPEIIHR-----AMRYSIFAGGKRLRPAMLIAAAEAV 59

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +    +    A+E IH YSLIHDDLPSMD+   RRGKPT H  + E  AI+AG+ LLT
Sbjct: 60  GGSADKVMPAACALELIHTYSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDALLT 119

Query: 126 YAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ 181
            +F++++  S +  +      +++  ++   G  G++GGQ++DI   ++ ID   +  I 
Sbjct: 120 MSFQLLAGLSGRNGIAPADVVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLEYIH 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KTGAL   A  SGA+++ A   E + L  + E+ G+ FQ+ DD+LD   D+ K
Sbjct: 180 TKKTGALFRAAIRSGAVLSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQK 234


>gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 295

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230


>gi|163790196|ref|ZP_02184629.1| geranyltranstransferase [Carnobacterium sp. AT7]
 gi|159874471|gb|EDP68542.1| geranyltranstransferase [Carnobacterium sp. AT7]
          Length = 299

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 119/202 (58%), Gaps = 5/202 (2%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            ++L  A+ Y++  GGK+IR  L+         +        AA+E IH YSLIHDDLP+
Sbjct: 29  KEKLHEAMSYSIAAGGKRIRPLLLLATIQSLGGDIKKGYAASAALEFIHTYSLIHDDLPA 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKPT HI Y E  AI+AG+ LLT AFEII+      +  ++  L+ +L  + 
Sbjct: 89  MDDDDLRRGKPTSHIVYGEDIAILAGDALLTQAFEIIADSDESSEKKVK--LISALAKSA 146

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +GM+ GQM DIQ E   ++  ++  I + KTG L+ F   +  ++A  +   +E+L  
Sbjct: 147 GPKGMILGQMADIQGEKKSLNLEELQFIHRNKTGELLKFPIYAACVIADTTTEIEEQLMG 206

Query: 213 FGENLGIIFQLADDLLDCEEDL 234
           + E++G+ +Q+ DD+LD   D+
Sbjct: 207 YAEHIGLAYQIRDDILDVIGDV 228


>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 295

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230


>gi|299768927|ref|YP_003730953.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter sp. DR1]
 gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter sp. DR1]
          Length = 303

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T       M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+   +  ++
Sbjct: 154 LAT---ATSKMVCGQVLDLQAEAKQIAQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQTIGLAFQVLDDILD 234


>gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 295

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEGLFQAPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLSSRDAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESD 230


>gi|312132100|ref|YP_003999440.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908646|gb|ADQ19087.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
          Length = 319

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 15/208 (7%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +H   L   I Y L LGGK+IR  L    A+LF  +  TA+    ++E  H ++L+HDD+
Sbjct: 21  EHPAELYEPIHYILSLGGKRIRPLLTLLSANLFTKSWETAIEPAMSVEVFHNFTLMHDDI 80

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLT 151
             MD   +RRGKPTVH ++D   AI++G+ +L  A+E++S  +  L K  I       L 
Sbjct: 81  --MDQAPLRRGKPTVHHKWDTNRAILSGDVMLVEAYELLSKLEASLLKKAI-------LR 131

Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            N     +  GQ LD+   + E + + +   + ++KT  L+ ++ E G I+A AS +  E
Sbjct: 132 FNKVAAEVCEGQQLDMLFAEREEVSKEEYLEMIRLKTSVLVGYSMELGGIVAGASPDACE 191

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L   GENLG+ FQ+ DD+LD   D PK
Sbjct: 192 LLYEVGENLGLGFQMTDDILDVYAD-PK 218


>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|298484883|ref|ZP_07002982.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 295

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230


>gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii AB900]
          Length = 303

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+      ++
Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234


>gi|323466278|gb|ADX69965.1| Geranyltranstransferase [Lactobacillus helveticus H10]
          Length = 289

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 37/232 (15%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL------ 70
           ++DD L   A H+ ++ +++ +S I  Y+++ GGK++R  L      L  +N L      
Sbjct: 14  VIDDYL---AKHLASEVDNQKISQIMAYSVMAGGKRLRPLLF-----LATLNTLGRKIDE 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +R+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + 
Sbjct: 66  PEIRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQW 125

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMI 180
           I+           +QL+  +T  +G  GM+GGQ LDI            +FI++     +
Sbjct: 126 IAEGSQS------AQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQ-----M 174

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +KTG L+  + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 175 EWLKTGCLIQASVEMAAVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVE 226


>gi|322834065|ref|YP_004214092.1| Polyprenyl synthetase [Rahnella sp. Y9602]
 gi|321169266|gb|ADW74965.1| Polyprenyl synthetase [Rahnella sp. Y9602]
          Length = 309

 Score =  114 bits (286), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 118/206 (57%), Gaps = 17/206 (8%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+RY ALLGGK++R +LV     LF+++        AA+ECIH YSLIHDDLP+MD+
Sbjct: 42  LVEAMRYGALLGGKRLRPYLVYASGQLFSLDLKNLDAPAAAVECIHAYSLIHDDLPAMDD 101

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154
             +RRG+PT HI++ E  AI++G+ L T AF I++    P   +KD  R  ++  L    
Sbjct: 102 DDLRRGQPTCHIKFGEANAILSGDALQTLAFSILADSEMPDVAVKD--RLAMISELALAS 159

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER--- 209
           G  GM GGQ LD+  E   +    +  I + KTGAL+  A   GA+ A     E  R   
Sbjct: 160 GSSGMCGGQALDLAAEGQQVGLDALEQIHRHKTGALIRAAVRMGALAA----GETGRAVL 215

Query: 210 --LRCFGENLGIIFQLADDLLDCEED 233
             L  + + +G+ FQ+ DD+LD   D
Sbjct: 216 PILDNYAQAIGLAFQVQDDILDVVGD 241


>gi|212223283|ref|YP_002306519.1| bifunctional short-chain isoprenyl diphosphate synthase
           [Thermococcus onnurineus NA1]
 gi|212008240|gb|ACJ15622.1| bifunctional short-chain isoprenyl diphosphate synthase
           [Thermococcus onnurineus NA1]
          Length = 342

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 16/230 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTA 72
           K++   +DD+L +     + +   +L  A R Y L GGK++R F+V   A     +   A
Sbjct: 12  KKMAKSVDDVLFKLIPEREPR---KLYDAARHYPLAGGKRVRPFVVLRAAEAVGGDPSKA 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L   AA+E IH YSL+HDD+  MD   +RRG+PTVH  +    AI+AG+ L + AFE ++
Sbjct: 69  LYPAAAVELIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGINMAILAGDLLFSKAFEAVA 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALM 189
             +   +   R   +L  T N     +  GQ LDI+ E  +E  V    +M   KTGAL 
Sbjct: 127 RAEISPEKKARILEVLVQTSN----ELCEGQALDIEFETREEVTVDEYLQMISGKTGALF 182

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             +   GAI+   ++   + L  +G N+GI FQ+ DD+LD    EE L K
Sbjct: 183 DGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEEKLGK 232


>gi|169632576|ref|YP_001706312.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii SDF]
 gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii]
          Length = 303

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 14/204 (6%)

Query: 37  DRLLSAIRYA-LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L SA+ +A +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP 
Sbjct: 34  EPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPC 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLML 148
           MDN  +RRG+PT H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +
Sbjct: 94  MDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQI 153

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             T +     M+ GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+      ++
Sbjct: 154 LATAS---SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQ 210

Query: 207 K-ERLRCFGENLGIIFQLADDLLD 229
              +LR +G+ +G+ FQ+ DD+LD
Sbjct: 211 AIPKLRQYGQAIGLAFQVQDDILD 234


>gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75274215|sp|Q9LUE1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
           chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
           AltName: Full=Dimethylallyltranstransferase 9; AltName:
           Full=Farnesyl diphosphate synthase 9; AltName:
           Full=Farnesyltranstransferase 9; AltName:
           Full=Geranyltranstransferase 9; Flags: Precursor
 gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
 gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
          Length = 360

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 11/197 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 96  AVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  Y E  A++AG+ LL  AFE   ++SS     +  IR+  ++ L   IG  
Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPEKMIRA--VVELARAIGTT 213

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQM+D+  E ++  +V +     I   KT AL+  A   G IM   ++ E E+LR 
Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRK 273

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 274 YARCIGLLFQVVDDILD 290


>gi|222153401|ref|YP_002562578.1| geranyltranstransferase [Streptococcus uberis 0140J]
 gi|222114214|emb|CAR42776.1| putative geranyltranstransferase [Streptococcus uberis 0140J]
          Length = 289

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 116/212 (54%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLP 93
           +++L  A+ Y++  GGK+IR  L  E      +    +  +  AA+E IH  SLIHDDLP
Sbjct: 22  SEKLNEAVLYSINAGGKRIRPILFLEVIEALQIPLTESHFKAAAALEMIHTGSLIHDDLP 81

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H ++DE TAI+AG+ L   AF +++  +T    ++   L+ SL+  
Sbjct: 82  AMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGMLA--ETDFPTDVTVDLVRSLSSA 139

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD+  E   ++   + +I + KTG L+ +   + A +A   +N      
Sbjct: 140 SGTFGMVGGQMLDMAAEGKKLNLKNLQLIHRHKTGQLLAYPFWAAARVAQLDENLLATFL 199

Query: 212 CFGENLGIIFQLADDLLDCEEDL------PKK 237
             G  +G+ FQ+ DD+LD   +       PKK
Sbjct: 200 EIGMIIGLAFQVRDDILDITANFEEIGKTPKK 231


>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 295

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 129/229 (56%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 230


>gi|228476852|ref|ZP_04061497.1| geranyltranstransferase [Streptococcus salivarius SK126]
 gi|228251426|gb|EEK10571.1| geranyltranstransferase [Streptococcus salivarius SK126]
          Length = 290

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 6/200 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L++AI Y++  GGK+IR  +  +    F +    +   V A++E IH  SLIHDDLP+MD
Sbjct: 26  LITAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSHFDVAASLEMIHTGSLIHDDLPAMD 85

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +   RRG+ T H ++DE TAI+AG+ L    F++++  +T L   IR QL+  L+H+ G 
Sbjct: 86  DDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLLA--QTDLSAEIRVQLIQVLSHSSGT 143

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQMLD++ E   +D +Q+  I + KTG L+ F   +  I+A   Q   E L+  G
Sbjct: 144 FGMVGGQMLDMKGEGQELDLSQLAKIHEHKTGKLLTFPFVAAGIVAQKDQQVLENLQEAG 203

Query: 215 ENLGIIFQLADDLLDCEEDL 234
             +G+ FQ+ DD+LD   D 
Sbjct: 204 HLIGLAFQVRDDILDVTADF 223


>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
           thaliana]
          Length = 360

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 11/197 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 96  AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  Y E  A++AG+ LL  AFE   ++SS     +  IR+  ++ L   IG  
Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRA--VVELARTIGTT 213

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQM+D+  E ++  +V +     I   KT AL+  A   G IM   ++ E E+LR 
Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 274 YARCIGLLFQVVDDILD 290


>gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 295

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEGLFQAPSPEL-----GRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESD 230


>gi|240103885|ref|YP_002960194.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Thermococcus gammatolerans EJ3]
 gi|239911439|gb|ACS34330.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Thermococcus gammatolerans EJ3]
          Length = 343

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 9/192 (4%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +A  Y L GGK++R F+V         +   AL   AA+E IH YSL+HDD+  MD   +
Sbjct: 37  AARHYPLAGGKRVRPFVVLRATEAVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--L 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+PTVH  +    AI+AG+ L + AFE ++  K       R   +L  T N     + 
Sbjct: 95  RRGRPTVHKVWGINMAILAGDLLFSKAFEAVAKAKVDPDKKARILEVLVKTSN----ELC 150

Query: 161 GGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ LDI+ E  DE  V    KM   KTGAL   +   GAI+   ++   + L  +G N+
Sbjct: 151 EGQALDIEFETRDEVTVDEYLKMISGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNV 210

Query: 218 GIIFQLADDLLD 229
           GI FQ+ DD+LD
Sbjct: 211 GIAFQIWDDVLD 222


>gi|149278033|ref|ZP_01884172.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter
           sp. BAL39]
 gi|149231231|gb|EDM36611.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter
           sp. BAL39]
          Length = 322

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 25/237 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
           P++LQE    ID  + +++            +RL   I Y + LGGK+IR  LV   A L
Sbjct: 4   PTQLQE---FIDQAIQNIIYPA-------QPERLYLPISYIMSLGGKRIRPALVLMSADL 53

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F  +    +    AIE  H ++LIHDD+  MDN  +RRGK TVH ++    AI++G+ ++
Sbjct: 54  FAADVHQVMPAALAIETFHNFTLIHDDI--MDNAPLRRGKATVHEKWGVNNAILSGDVMM 111

Query: 125 TYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMI 180
             A + ++      LKD +        T N   QG+  GQ LD++ E  D+  +     +
Sbjct: 112 VEANKHLAMLDAAVLKDALE-------TFNSTAQGVCEGQQLDMEFESRDQVSIPEYINM 164

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
            ++KT  L+  A + GA +A A++++ E+L  FGENLGI FQL DD+LD   D P+K
Sbjct: 165 IRLKTAVLLGGAMKLGAQVARATKSQAEQLYAFGENLGIAFQLQDDILDVYGD-PEK 220


>gi|332184586|gb|AEE26840.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Francisella cf.
           novicida 3523]
          Length = 293

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 110/202 (54%), Gaps = 19/202 (9%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A+ Y+   GGK+IR+  V        ++     +V  AIE IH YSLIHDDLP+MDN
Sbjct: 28  LIKAMHYSFFSGGKRIRAQFVYAIGEALAIDKADCDKVAFAIESIHTYSLIHDDLPAMDN 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHN 153
             +RRGKPT HI+++E TAI+AG+ L + AFEI+     S   +LK     ++       
Sbjct: 88  DTLRRGKPTCHIKFNEATAILAGDALQSLAFEILQDINCSDIARLK-----KINKFFAQC 142

Query: 154 IGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE--K 207
            G  GM+GGQ LDI+ E     ++E Q+    K    A M  AC     +   +QN+  +
Sbjct: 143 CGADGMVGGQQLDIEGENKKLNLEELQILHTNKT---AKMFRACIVLPYILSQNQNDEIE 199

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
             L    + +G+ FQ+ DD+LD
Sbjct: 200 NLLVKLADLIGLCFQIKDDILD 221


>gi|17546941|ref|NP_520343.1| geranyltranstransferase [Ralstonia solanacearum GMI1000]
 gi|17429241|emb|CAD15929.1| probable geranyltranstransferase (farnesyl-diphosphate synthase)
           protein [Ralstonia solanacearum GMI1000]
          Length = 299

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 14/204 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+RYA LG GK++R  L     +L   +      V  A+E IH YSL+HDD+P MD
Sbjct: 32  RLHAAMRYATLGAGKRVRPLLAHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151
           +  +RRG+PTVH  YDE TA++ G+ L T AF  ++     SP T      R+ L+  L 
Sbjct: 92  DDDLRRGRPTVHRAYDEATALLVGDALQTQAFIALAELGAVSPAT------RAGLVGELA 145

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM GGQ +D+Q   +  +Q  +  + +MKTGAL+  +   GA+ A  +    E+
Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  +   +G+ FQ+ DD+LD   D
Sbjct: 206 VDAYAGAVGLAFQVVDDILDVTAD 229


>gi|255531531|ref|YP_003091903.1| polyprenyl synthetase [Pedobacter heparinus DSM 2366]
 gi|255344515|gb|ACU03841.1| Polyprenyl synthetase [Pedobacter heparinus DSM 2366]
          Length = 322

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 15/206 (7%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ++L + IRY + +GGK+IR  L    A LF  + L A+    AIE  H ++L+HDD+  M
Sbjct: 25  EKLYAPIRYIMSMGGKRIRPVLTLMAADLFEADILKAIPAALAIETFHNFTLVHDDI--M 82

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNI 154
           DN  +RRGK TVH ++    AI++G+ ++  A + +S   +  LKD +        T N 
Sbjct: 83  DNAPLRRGKQTVHEKWGINNAILSGDVMMVEANKQLSMLHSAILKDALE-------TFNA 135

Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
             +G+  GQ LD+   Q   +   +   + ++KT  L+  A + GA +A A  NE E+L 
Sbjct: 136 TARGVCEGQQLDMEFEQQAIVSIPEYINMIRLKTAVLLGGAMKLGAQVAGADHNEAEQLY 195

Query: 212 CFGENLGIIFQLADDLLDCEEDLPKK 237
            FG NLGI FQL DD+LD   D P+K
Sbjct: 196 QFGLNLGIAFQLQDDILDVYGD-PEK 220


>gi|254468449|ref|ZP_05081855.1| geranyltranstransferase [beta proteobacterium KB13]
 gi|207087259|gb|EDZ64542.1| geranyltranstransferase [beta proteobacterium KB13]
          Length = 290

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 3/204 (1%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ND    AI+YA+  GGK+IR++L+      F ++      +GA+IE IH YSL+HDDLP 
Sbjct: 26  NDINHKAIKYAISNGGKRIRAYLLFTLGKHFGISKNVLNILGASIEMIHAYSLVHDDLPC 85

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGK T H ++DE  A++ G+ L + AFE++SS K ++   ++ + +  L  +I
Sbjct: 86  MDDDDLRRGKLTCHKKFDEAQALLVGDALQSLAFELLSSNKLKIDPELKLECINLLASSI 145

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +GM+ GQ LD+  E    T+  +  I + KTG L+       +I++    +  + L+ 
Sbjct: 146 GSKGMVLGQSLDMIYEKKKPTKKIIEKIHRNKTGMLISTCILIPSIISRQRNSTHKNLKI 205

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
             ENLG+++Q+ DD LD   D+ K
Sbjct: 206 LSENLGLLYQMVDDYLDATSDVEK 229


>gi|295695407|ref|YP_003588645.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912]
 gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912]
          Length = 295

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 123/230 (53%), Gaps = 13/230 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
            +  ++ +D  LD L+         +   RL  A+RY+L  GGK++R  L          
Sbjct: 9   WEAGARAVDDALDALI------PPGKGAGRLHEAMRYSLFAGGKRLRPLLAMAACEGAGG 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   AL    A+E +H YSLIHDDLP+MD+   RRG+PT H  + E  A++AG+ LLT A
Sbjct: 63  SLREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLAGDALLTLA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKM 183
           F +++  K  L    R +L+  L    G  GM+GGQ LDI+    D   D   +  + + 
Sbjct: 123 FGVLA--KAPLPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPELLRDLHRK 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  +   G + A A ++  +RL  +G+ +G+ +Q+ DDLLD   D
Sbjct: 181 KTGALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGD 230


>gi|90415578|ref|ZP_01223512.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
 gi|90332901|gb|EAS48071.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
          Length = 295

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 128/223 (57%), Gaps = 10/223 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           S ++D  L+ +L        T   + L +A+RY++  GGK++R  L    A     +   
Sbjct: 12  SAQVDAQLEAML-----PAATGPAEPLFAAMRYSVFNGGKRLRPALCFAAADAVAGSDAN 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V AA+E IH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+AG+GL + AF+ +
Sbjct: 67  TAKVAAALEMIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILAGDGLQSLAFQQL 126

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALM 189
               ++L   I  +L+ +L+   G  GM+ GQ +D+      ++   + ++   KTGAL+
Sbjct: 127 CE-LSELDPTIVVELVSTLSRLGGCSGMVAGQAIDLAATGSVLELDALKVMHAHKTGALI 185

Query: 190 CFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +   GA+    ASQ +   L+ F   +G+ FQ+ DD+LD E
Sbjct: 186 EASVLMGALATGQASQEQLGALKDFARAIGLAFQIQDDILDVE 228


>gi|313114145|ref|ZP_07799697.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623554|gb|EFQ06957.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 293

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 121/208 (58%), Gaps = 5/208 (2%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+TA          +  A RY+L+GG K+IR+ LV     +   +   A +  AA+E +H
Sbjct: 18  LETACGRFLPEESEVCRAARYSLMGGGKRIRAVLVLSVCDMLGGSMQAAQQFAAAVEMLH 77

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
           CYSLIHDDLP MDN  +RRG+P+ H  + E TA++AG+ LLT AFE +++       ++ 
Sbjct: 78  CYSLIHDDLPCMDNDDLRRGRPSCHKAFSEATAMLAGDVLLTEAFETVANAPADA--SVC 135

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAH 201
            Q   +L    G +GM+ GQ LD++ E +   E Q+ +I + KTGAL+  A + GA  A 
Sbjct: 136 VQAARALGAGAGSRGMVYGQELDLKYEALAATEDQLRLIHRNKTGALINAAIQMGAAAAK 195

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           A + +   L  +   LG++FQ+ DD+LD
Sbjct: 196 ADEAQCRVLEQYAYGLGLVFQIVDDVLD 223


>gi|153208848|ref|ZP_01947072.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212218667|ref|YP_002305454.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154]
 gi|120575699|gb|EAX32323.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212012929|gb|ACJ20309.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154]
          Length = 267

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 11/200 (5%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q   RL  A+ YA+  GGK+IR          F V+         AIE +HCYSL+HDDL
Sbjct: 24  QTPQRLHEAMTYAVRSGGKRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDL 83

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+++      +DN  ++L+  L +
Sbjct: 84  PAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLA------RDN-NTRLINVLAN 136

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ER 209
             G  GM GGQ LD++ +  + T  Q+ ++ ++KTGAL   A E GA+ A     ++ ++
Sbjct: 137 ACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQK 196

Query: 210 LRCFGENLGIIFQLADDLLD 229
           LR  G  +G+IFQ  DDL D
Sbjct: 197 LRKLGATVGLIFQWQDDLAD 216


>gi|313905343|ref|ZP_07838709.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6]
 gi|313469813|gb|EFR65149.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6]
          Length = 298

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 13/203 (6%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+ Y++L GGK+IR  L+ E   +   +        AAIE IH +SL+HDDLP++D
Sbjct: 31  KLTEAMNYSMLAGGKRIRPVLMLESYRMCGGDAAVVEPFMAAIEMIHTHSLVHDDLPAID 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155
           +   RRGK T H  +     ++AG+ LL YA+E   +     +D  + ++ +  L    G
Sbjct: 91  DDEFRRGKKTTHAAFGAALGVLAGDALLNYAYETAMTAFDCCQDPAKVARALRVLAQKTG 150

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM--------KTGALMCFACESGAIMAHASQNEK 207
           + GMLGGQ +D+++E   +  VF +++         KT AL+      GAI+A A +   
Sbjct: 151 IGGMLGGQSVDVENE---KNGVFQLERKTIDYIYVNKTAALLEAPLMIGAILAGADEKTV 207

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
             ++  G   G+ FQ+ADD+LD 
Sbjct: 208 SAMQEIGHRAGLAFQIADDVLDV 230


>gi|299066176|emb|CBJ37360.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum CMR15]
          Length = 299

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 14/204 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+RYA LG GK++R  L     +L   +      V  A+E IH YSL+HDD+P MD
Sbjct: 32  RLHAAMRYATLGAGKRVRPLLAHAAGALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLT 151
           +  +RRG+PTVH  YDE TA++ G+ L T AF  ++     SP T      R+ L+  L 
Sbjct: 92  DDDLRRGRPTVHRAYDEATALLVGDALQTQAFIALAELGAVSPAT------RAGLVGELA 145

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM GGQ +D+Q   +  +Q  +  + +MKTGAL+  +   GA+ A  +    E+
Sbjct: 146 RASGSLGMAGGQAIDLQSVGVALSQDALETMHRMKTGALLRASLRMGALCAGVNAAALEQ 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  +   +G+ FQ+ DD+LD   D
Sbjct: 206 VDAYAGAVGLAFQVVDDILDVTAD 229


>gi|72536066|gb|AAZ73133.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
           DC404]
          Length = 301

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 113/199 (56%), Gaps = 6/199 (3%)

Query: 36  NDRLLSAIRYALLG-GKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDL 92
            DR+ SA+R  +L  GK+IR  L+   A     + +H   L +  A+E +H  SLI DD+
Sbjct: 36  RDRVSSAMREGVLAPGKRIRPLLLILAARDLGCDRDHPGLLDMACAVEMVHASSLILDDI 95

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRG+PT+H QY E  AI+A   LL+ AF ++ + +  L    RSQ +  L+ 
Sbjct: 96  PCMDNAALRRGRPTIHRQYGEDVAILAAVALLSSAFGVMVAAQG-LSPECRSQAVAELSM 154

Query: 153 NIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G QG++ GQ  D+++     +  ++    ++KT  L     +  A+ A AS   ++++
Sbjct: 155 AVGTQGLVQGQYKDLREGTAPRSAEEIATTNELKTSVLFGATLQIAALAAGASPAARQKM 214

Query: 211 RCFGENLGIIFQLADDLLD 229
           RCF ++LG  FQL DDL D
Sbjct: 215 RCFAQDLGQAFQLLDDLAD 233


>gi|257439493|ref|ZP_05615248.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165]
 gi|257198065|gb|EEU96349.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165]
          Length = 227

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 124/209 (59%), Gaps = 7/209 (3%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+ A          +  A RY+LLGG K+IR+ LV     + N +   A +  AA+E +H
Sbjct: 18  LEKACETFLPEESEVCRAARYSLLGGGKRIRAVLVLAVCDMLNGSAEAAEQFAAAVEMLH 77

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNI 142
           CYSLIHDDLP MDN  +RRGKP+ H  + E TA++AG+ LLT AF +++ +P + +   +
Sbjct: 78  CYSLIHDDLPCMDNDDLRRGKPSCHKAFGESTAMLAGDVLLTEAFNVVANAPASPI---V 134

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMA 200
             Q   +L    G  GM+ GQ LD++ E +   E Q+ +I + KTGAL+  A + GA  A
Sbjct: 135 SVQAAKALGAGAGSHGMVYGQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAA 194

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
            A++ + + L  +   +G++FQ+ DD+LD
Sbjct: 195 QANETQCKELEDYAFGIGLVFQIVDDVLD 223


>gi|313200383|ref|YP_004039041.1| polyprenyl synthetase [Methylovorus sp. MP688]
 gi|312439699|gb|ADQ83805.1| Polyprenyl synthetase [Methylovorus sp. MP688]
          Length = 295

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 15/226 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL- 73
           R++ +LDD+L   A+++      RL  A+RYA+LGG K    L+   A  F    ++A+ 
Sbjct: 13  RMERVLDDIL--PAANIIPS---RLHGAMRYAVLGGGKRVRALLAHAAGEFCQAPISAVE 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +  AA+E IH YSL+HDD+P MD+  +RRGKP+ H QYD+ TA++ G+ L   AF++++ 
Sbjct: 68  QSAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQALAFKVLAE 127

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMC 190
           P   L+D  R   M+  L    G +GM GGQ +D+    +D TQ  + Q    KTGAL+ 
Sbjct: 128 PGL-LRDAARQMHMVHILAVASGSRGMAGGQAIDLASVGLDLTQTELEQMHIHKTGALIR 186

Query: 191 FACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEED 233
            A   GA    A   + +R++    + + +G+ FQ+ DD+LD E D
Sbjct: 187 AAALLGA--ESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEAD 230


>gi|297537809|ref|YP_003673578.1| polyprenyl synthetase [Methylotenera sp. 301]
 gi|297257156|gb|ADI29001.1| Polyprenyl synthetase [Methylotenera sp. 301]
          Length = 304

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 125/222 (56%), Gaps = 10/222 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73
           RI+ +L++ L  T    Q     RL SA+RY AL GGK++R+ L    + L   +   A 
Sbjct: 25  RIEDVLNNALPSTNVAPQ-----RLHSAMRYSALEGGKRVRALLCYAASELCKTDAKVAD 79

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDD+P MD+  +RRGKP+ H QYD+ TA++ G+ L + AFE++S 
Sbjct: 80  AAACAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQSLAFEVLSQ 139

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCF 191
                + N +  ++  L    G  GM GGQ +D+    + + +T +  + ++KTGAL+  
Sbjct: 140 ANLCTQTNHQVSMLNILAKASGSTGMAGGQAIDLASVGKMLSQTDLEQMHQLKTGALIQA 199

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A   G I  +    +   +  + +N+G+ FQ+ DD+LD E D
Sbjct: 200 AVLLGGI--NGEIEKTAAISTYAKNIGLAFQVIDDILDVEAD 239


>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 295

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 114/201 (56%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RY+++ GGK++R  L              A     A+E IH YSL+HDDLP+MD
Sbjct: 30  RLYDAMRYSVMNGGKRVRPLLAYAACEALGGEARDADGAACAVELIHAYSLVHDDLPAMD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIG 155
           +  +RRG+PT H  +DE  AI+AG+GL + AF  + +P    +D   R Q++ +L    G
Sbjct: 90  DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFTALLAPHLTSRDAETRLQMVSTLAAAAG 149

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRC 212
             GM+GGQ +D+      +D+  +  + + KTGAL+  +   GA+ +  A Q   + L+ 
Sbjct: 150 PAGMVGGQAIDLGSVGLKLDQAALEYMHRHKTGALIEASVRLGALASGQADQPRLDSLQV 209

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +   +G+ FQ+ DD+LD E D
Sbjct: 210 YARAVGLAFQVQDDILDVESD 230


>gi|75274213|sp|Q9LUD9|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
           chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
           AltName: Full=Dimethylallyltranstransferase 3; AltName:
           Full=Farnesyl diphosphate synthase 3; AltName:
           Full=Farnesyltranstransferase 3; AltName:
           Full=Geranyltranstransferase 3; Flags: Precursor
 gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 360

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 11/197 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 96  AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  Y E  A++AG+ LL  AFE   ++SS     +  IR+  ++ L   IG  
Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRA--VVELARAIGTT 213

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQM+D+  E ++  +V +     I   KT AL+  A   G IM   ++ E E+LR 
Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 274 YARCIGLLFQVVDDILD 290


>gi|317053956|ref|YP_004117981.1| Polyprenyl synthetase [Pantoea sp. At-9b]
 gi|316951951|gb|ADU71425.1| Polyprenyl synthetase [Pantoea sp. At-9b]
          Length = 301

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 8/202 (3%)

Query: 34  QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHD 90
           Q  D++ +A+R   L  GK+IR  L+   A     +      L +  A+E +H  SLI D
Sbjct: 34  QQADQVRAAMRAGTLAPGKRIRPLLLLLAAHDMGCDSQQPGLLDLACAVEMVHAASLILD 93

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           D+PSMDN  +RRG+PTVH ++    AI+A   LL+ AFE+I+ +P   L    +S  +  
Sbjct: 94  DIPSMDNAQMRRGRPTVHREFGANVAILAAIALLSRAFEVIALAPG--LAAQRKSDAIAE 151

Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+  +GLQG++ GQ  D+ D         + +  ++KT  L     +  AI A+AS   +
Sbjct: 152 LSAAVGLQGLVQGQFQDLHDGAHARSAEAIELTNELKTSVLFRATLQMAAIAANASPTVR 211

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           + L  F ++LG+ FQL DDL D
Sbjct: 212 QNLSAFAQDLGLAFQLLDDLTD 233


>gi|154174645|ref|YP_001409121.1| geranyltranstransferase [Campylobacter curvus 525.92]
 gi|153793122|gb|EAU00317.2| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Campylobacter curvus 525.92]
          Length = 300

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 24/206 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK  R+ L+           LT  A+RV   +E +H YSLIHDDLP+MD+  +RRG PT
Sbjct: 36  GGKHFRAQLLLGVVDALR-PQLTQNAMRVALGLEMMHTYSLIHDDLPAMDDAPLRRGVPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H +YDEVTAI+AG+ L T AF  IS  +  L+  +  + +  L+ N G  GM+ GQ LD
Sbjct: 95  LHTRYDEVTAILAGDALNTQAFYEIS--RADLEAPVVVKCVEILSANAGASGMVLGQALD 152

Query: 167 IQDEFIDETQVF-------MIQKM------------KTGALMCFACESGAIMAHASQNEK 207
              E  D+  V        + QK             KT  L+  + E GA++A     + 
Sbjct: 153 CFFENSDKADVKNAKNRLGLAQKRLNLDELEFLHIHKTAKLIAASLEMGAVIAALDAAQC 212

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           ER+   G +LG+ FQ+ DDL+D   D
Sbjct: 213 ERIYGIGLDLGLAFQIEDDLIDATSD 238


>gi|72536073|gb|AAZ73139.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
           DC416]
          Length = 301

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 112/202 (55%), Gaps = 8/202 (3%)

Query: 34  QHNDRLLSAIRYALLG-GKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHD 90
           Q  DR+ +A+R   L  GK+IR  L+   A     +V     L +  A+E +H  SLI D
Sbjct: 34  QQADRVRAAMRAGTLAPGKRIRPLLLLLAARDMGCDVAQQGILDLACAVEMVHAASLILD 93

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLS 149
           D+PSMDN  +RRG+P +H +Y E  AI+A   LL+ AFE+I+ +P   L    +++ +  
Sbjct: 94  DIPSMDNARMRRGRPAIHCEYGENVAILAAVALLSRAFEVIALAPG--LPATHKAEAIAE 151

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+  +GLQG++ GQ  D+ D     +   + +  ++KT  L     +  AI A AS   +
Sbjct: 152 LSSAVGLQGLVQGQFQDLHDGAHSRSPEAITLTNELKTSVLFRATLQMAAIAADASVQVR 211

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           +RL  F ++LG  FQL DDL D
Sbjct: 212 QRLSYFAQDLGQAFQLLDDLAD 233


>gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896]
          Length = 296

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 120/193 (62%), Gaps = 3/193 (1%)

Query: 40  LSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + ++ Y+LL GGK+IR  L  + A L+++++   L   +A+E IH YSLIHDDLP+MD+ 
Sbjct: 37  MESMNYSLLAGGKRIRPILCLQSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDD 96

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRGKPT H  Y E  AI+AG+GLL  A+EI+ +       + + + +  +    G+ G
Sbjct: 97  DLRRGKPTNHKVYGEAIAILAGDGLLNLAYEIMLNDLLHGYTDGKLKAVHYIAKAAGIHG 156

Query: 159 MLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           M+ GQ+LD+Q  ++  D   +  I + KTG L+  +  +GA++  AS+ +      + ++
Sbjct: 157 MVAGQVLDLQMENQRCDADLLKKIHRNKTGELLKASILAGALVGGASEEDCYYWEQYADH 216

Query: 217 LGIIFQLADDLLD 229
           LG++FQ+ DD+LD
Sbjct: 217 LGLVFQITDDMLD 229


>gi|121534498|ref|ZP_01666321.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306991|gb|EAX47910.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
          Length = 221

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 105/188 (55%), Gaps = 9/188 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L +  Q+ +  +D  L  L+ + A +++T +      A+RY+L  GGK++R  L+   A 
Sbjct: 4   LKAYCQQKAALVDEALARLVPRQAGYLETVYE-----AMRYSLFAGGKRLRPILLMAAAD 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    L V   +E IH YSLIHDDLP+MDN   RRGKPT H  + E  AI+AG+GL
Sbjct: 59  AVGGRGSQYLHVACGLEMIHTYSLIHDDLPAMDNDDFRRGKPTSHRVFGEGMAILAGDGL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT AFE++ S +  ++  +  +++  +    G  GM+GGQ +D+  E   +D   +  + 
Sbjct: 119 LTAAFEVMLS-QPGVEPGVLLKVVREIAQAAGPAGMVGGQAVDLAAEGKVLDADALKFMH 177

Query: 182 KMKTGALM 189
           + KTGAL 
Sbjct: 178 QAKTGALF 185


>gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1]
 gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1]
          Length = 351

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 125/242 (51%), Gaps = 26/242 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF--- 65
           Q  SK +  +LD +L  ++        + L  A RYA+  GGK++R  LV     +    
Sbjct: 54  QWQSKNLPNLLDIILTHSSL------PEPLNKACRYAMSNGGKRVRPLLVLSTFLMLIQT 107

Query: 66  -----NVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
                + N+LT       R   A+E IH YSLIHDDLP MD+  +RRG+PT HI Y E  
Sbjct: 108 GDHKNHKNNLTKKIQMLFRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDV 167

Query: 116 AIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--F 171
           A++AG+ L + AFE++     K    D I  +L   L+     + M+ GQMLDI+ E   
Sbjct: 168 ALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLS--CRARRMVSGQMLDIKGENQM 225

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + + ++  I + KTGAL+  A   GAI A    +    L+ +   +G+ FQ+ DD+LD  
Sbjct: 226 LSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDIT 285

Query: 232 ED 233
            D
Sbjct: 286 AD 287


>gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
          Length = 298

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 124/227 (54%), Gaps = 10/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E +K ++  L + + + A   +T     L  A+ Y+LL GGK++R  L    A     
Sbjct: 8   LKEKAKSVEARLKEYMERPAGIPET-----LREAMAYSLLAGGKRLRPVLTLATAEALGG 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   AL    A+E IH YSLIHDDLP+MD+   RRG PT H  Y E  AI+AG+ LLT A
Sbjct: 63  DEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLTRA 122

Query: 128 FEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           F++++      +L       L+       G +GM+GGQ+ DIQ E   +   ++  I + 
Sbjct: 123 FDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEELQDIHRS 182

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTG L+  +   GA++  + ++E + L  + E LG+ FQ+ DD+LD 
Sbjct: 183 KTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDV 229


>gi|14624998|dbj|BAB61879.1| farnesyl diphosphate synthase [Rhodobacter blasticus]
          Length = 138

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 8/142 (5%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRG PTVH+++DE TA++AG+ L T AFE++  P     + +R  L+ 
Sbjct: 1   HDDMPCMDNDDLRRGLPTVHVKWDEATAVLAGDALQTLAFELLCDPVAGPAE-VRIGLVQ 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +L    G +GM+ GQ LDI  E         ++  +Q  KTGAL+ F+ E+GAI+A   Q
Sbjct: 60  ALAQASGAEGMVLGQALDIAAETAGRPLTLDEITALQAGKTGALIRFSAEAGAILA---Q 116

Query: 205 NEKERLRCFGENLGIIFQLADD 226
            ++  LR +   LG+ FQ+ADD
Sbjct: 117 ADRAPLRTYATALGLAFQIADD 138


>gi|291459864|ref|ZP_06599254.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291417654|gb|EFE91373.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 317

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 22/208 (10%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNH---------LTALRVGAAIECIHCYSLIHDD 91
           A+ Y+LL GGK++R  L+ E   LF+            L A   G  +E IH +SL HDD
Sbjct: 37  AMNYSLLSGGKRLRPILILESYELFSPKEERDRLLRPLLYAFMAG--MEMIHSFSLCHDD 94

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIR------ 143
           LP MD    RRG+ +   +Y E    +AG+GL  YAF+++S    +  LK          
Sbjct: 95  LPCMDGDRYRRGRKSTWYRYGEAMGTLAGDGLSLYAFQLVSKTAAEGFLKPGFSRYASDV 154

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           ++ +  L+ + G+ GMLGGQ  D++   + + E ++ +I + KT AL+  A   GA++A 
Sbjct: 155 NEAVRLLSSSAGIHGMLGGQAADVRKTGQEMGEEELLLIYERKTAALISGALSIGALLAG 214

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           AS      LR   + LG+ FQ+ DD+LD
Sbjct: 215 ASAESIALLREISKALGLAFQIRDDILD 242


>gi|315639120|ref|ZP_07894287.1| geranyltranstransferase [Campylobacter upsaliensis JV21]
 gi|315480824|gb|EFU71461.1| geranyltranstransferase [Campylobacter upsaliensis JV21]
          Length = 277

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+      +       AL    A+E IH YSLIHDDLP+MDN   RR  PT+
Sbjct: 34  GGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYSLIHDDLPAMDNADFRRSTPTL 93

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S  +  L   I  +L+ +L  N GL GM+ GQ +D 
Sbjct: 94  HKSYDETTAILVGDALNTEAFLLLS--RLNLSATISLKLVETLAFNAGLNGMIIGQAIDC 151

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ ++  ++  +   KT  L+  + + G  +    +   ++L   G  LG+IFQ+ D
Sbjct: 152 YFEDQKLNLKELEFLHTHKTAKLIAASLKMGCQICELDETITKQLYELGLKLGLIFQIND 211

Query: 226 DLLDC 230
           D++D 
Sbjct: 212 DIIDA 216


>gi|295693200|ref|YP_003601810.1| geranyltranstransferase [Lactobacillus crispatus ST1]
 gi|295031306|emb|CBL50785.1| Geranyltranstransferase [Lactobacillus crispatus ST1]
          Length = 289

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 29/228 (12%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRS--FLVTECASLFNVNHLTALR 74
           ++DD L   A H+ ++  D+ +S I  Y+++ GGK++R   FL T  A    +     +R
Sbjct: 14  VIDDYL---AKHLASEVEDQKISQIMAYSVMAGGKRLRPLLFLATLNALGRKIEE-PEIR 69

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+  
Sbjct: 70  IACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEG 129

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMIQKMK 184
               K      L+  +T  +G  GM+GGQ LDI            +FI++     ++ +K
Sbjct: 130 SKSAK------LVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-----MEWLK 178

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           TG L+  + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 179 TGCLIQASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVE 226


>gi|256843404|ref|ZP_05548892.1| geranylgeranyl diphosphate  synthase [Lactobacillus crispatus
           125-2-CHN]
 gi|293380304|ref|ZP_06626378.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
 gi|256614824|gb|EEU20025.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
           125-2-CHN]
 gi|290923119|gb|EFE00048.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
          Length = 289

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 29/228 (12%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAI-RYALLGG-KKIRS--FLVTECASLFNVNHLTALR 74
           ++DD L   A H+ ++  D+ +S I  Y+++GG K++R   FL T  A    +     +R
Sbjct: 14  VIDDYL---AKHLASEVEDQKISQIMAYSVMGGGKRLRPLLFLATLNALGRKIEE-PEIR 69

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+  
Sbjct: 70  IACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEG 129

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMIQKMK 184
               K      L+  +T  +G  GM+GGQ LDI            +FI++     ++ +K
Sbjct: 130 SKSAK------LVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-----MEWLK 178

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           TG L+  + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 179 TGCLIQASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVE 226


>gi|71066490|ref|YP_265217.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4]
 gi|71039475|gb|AAZ19783.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4]
          Length = 335

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 115/219 (52%), Gaps = 29/219 (13%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTA-------------------LRVGA 77
           LL A RY + G GK +R  LV    AS ++ N   A                    R   
Sbjct: 48  LLDACRYVMTGTGKLVRPLLVASAFASTYSHNDTIADKDNALATLLENDSDYDMSRRAAL 107

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PK 135
           A+E +H YSL+HDDLP MD+  +RRG+PT HI + E TA++AG+ L T AFE++++  P 
Sbjct: 108 AVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFAEATALLAGDVLQTLAFEVLTAEMPT 167

Query: 136 -TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
                 +I SQL          + M+ GQMLD+  E    I ++ +  I + KTGAL+  
Sbjct: 168 FAPFDSDIASQLFAIFAPRA--RRMVSGQMLDLNAEATTGISQSDLEAIHRDKTGALIEA 225

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A   G I A A+  ++  L+   +++G+ FQ+ DD+LD 
Sbjct: 226 AMLMGGICAGATATQRMALQECAQHIGLAFQVQDDILDV 264


>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 369

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 111/196 (56%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  ++RY+LL GGK++R  L      L   N   A+    A+E IH  SLIHDDLP MD
Sbjct: 104 KIHESMRYSLLAGGKRVRPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMD 163

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT HI + E  A++AG+ LL  AFE I+     +      + +  L   IG 
Sbjct: 164 NDDLRRGKPTNHIVFGEDVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGA 223

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + E    ++  I   KT  L+  A   GAIM   +  E E+LR +
Sbjct: 224 EGLVAGQVVDICSEGLSEVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKY 283

Query: 214 GENLGIIFQLADDLLD 229
             ++G++FQ+ DD+LD
Sbjct: 284 ARDIGLLFQVVDDILD 299


>gi|126727249|ref|ZP_01743085.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
           HTCC2150]
 gi|126703458|gb|EBA02555.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
           HTCC2150]
          Length = 287

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 124/200 (62%), Gaps = 9/200 (4%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +A+ +A+ GGK++R FLV E ASL  V    AL   AA+E +H YSL+HDDLP MD+  +
Sbjct: 31  AAMAHAVTGGKRLRGFLVLEGASLHGVAANDALNAAAAVEALHAYSLVHDDLPCMDDDDL 90

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+PTVH+++D  TA++AG+ L T AF++++   T +  + +  L+  +    G  GM+
Sbjct: 91  RRGQPTVHVKWDYATAVLAGDALQTLAFDLLAD--TPVSADRQISLIKGMAVASGAAGMV 148

Query: 161 GGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            GQ +DI  E     +D   + ++Q  KTGAL+ ++ E+G I+A    ++   +  +   
Sbjct: 149 LGQAMDIAAETAETPLDLNAITLLQANKTGALIRWSAEAGPILAG---DDPTPMCDYATA 205

Query: 217 LGIIFQLADDLLDCEEDLPK 236
           LG+ FQ+ADD+LD E D  K
Sbjct: 206 LGLAFQIADDILDIEGDAAK 225


>gi|78357244|ref|YP_388693.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219649|gb|ABB38998.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 304

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 121/195 (62%), Gaps = 4/195 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL A+ Y+LL GGK++R  L    A LF +     L   AAIE IH YSL+HDDLP+MD+
Sbjct: 40  LLKAMDYSLLAGGKRLRPVLCLTTAGLFGLARDAVLPFAAAIELIHTYSLVHDDLPAMDD 99

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P+ H ++ E TAI+AG+GLLT AF +++S    ++ +     +  +    G  
Sbjct: 100 DDLRRGMPSNHKKFGEATAILAGDGLLTEAFCLMASAGAAVEASRVLSALSVVAAAAGAG 159

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQ---KMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           GM+GGQMLD++     +  + M++    MKTGAL+  +C +GA++A A   + ER+  +G
Sbjct: 160 GMVGGQMLDMEYTGRADVSLDMLRGMHAMKTGALIRCSCLAGALLAGAPHEDAERISHYG 219

Query: 215 ENLGIIFQLADDLLD 229
           E +G  FQ+ DD+LD
Sbjct: 220 EAIGAAFQIVDDILD 234


>gi|260101429|ref|ZP_05751666.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM
           20075]
 gi|260084769|gb|EEW68889.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM
           20075]
 gi|328465627|gb|EGF36850.1| Geranyltranstransferase [Lactobacillus helveticus MTCC 5463]
          Length = 289

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 37/232 (15%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL------ 70
           ++DD L   A H+ ++ +++ +S I  Y+++ GGK++R  L      L  +N L      
Sbjct: 14  VIDDYL---AKHLASEVDNQKISQIMAYSVMAGGKRLRPLLF-----LATLNTLGRKIDE 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +R+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + 
Sbjct: 66  PEIRIVCGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQW 125

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMI 180
           I+           +QL+  +T  +G  GM+GGQ LDI            +FI++     +
Sbjct: 126 IAEGSQS------AQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQ-----M 174

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +KTG L+  + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 175 EWLKTGCLIQASVEMAAVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVE 226


>gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700]
 gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Aggregatibacter aphrophilus NJ8700]
          Length = 296

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 117/198 (59%), Gaps = 6/198 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ A++Y LL GGK+IR FLV     +   N        AAIE IH YSLIHDDLP+MD+
Sbjct: 33  LVEAMKYGLLLGGKRIRPFLVYATGRILGANLAHLDYAAAAIEAIHAYSLIHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  T HI +DE TAI+AG+ L ++AFEI++     L    +  L+ +L+   G++
Sbjct: 93  DELRRGHKTCHIAFDEATAILAGDALQSFAFEILTD-IPDLSAQQKLALIKTLSAAAGVK 151

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCF 213
           GM  GQ LD+  + + I  T++  I   KTGAL+  A + G I +    +E   ++L  +
Sbjct: 152 GMCLGQSLDLISEQKAISLTELEHIHLNKTGALLTAALKLGFICSPHFADEALLQQLERY 211

Query: 214 GENLGIIFQLADDLLDCE 231
              +G+ FQ+ DD+LD E
Sbjct: 212 ATAIGLAFQVQDDILDIE 229


>gi|242310626|ref|ZP_04809781.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT
           98-5489]
 gi|239523024|gb|EEQ62890.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT
           98-5489]
          Length = 288

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 106/187 (56%), Gaps = 5/187 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L+      +    +  A     A+E +H YSLIHDDLP+MDN  +RRG  T+
Sbjct: 41  GGKRFRPKLLLSIVDAYKPKSIQKAFSSALALEILHTYSLIHDDLPAMDNADLRRGAQTL 100

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H +YDE  AI+ G+ L T++F  I++ K  LK  I+++L+  L++N G+ GM+ GQ LD 
Sbjct: 101 HCKYDECGAILIGDALNTHSFYCIATSK--LKPKIKNKLIKILSYNGGIYGMVLGQALDC 158

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             + + +    +  I   KT  L+  + + G I+A   +   + L   G +LG+ FQ+ D
Sbjct: 159 YFEKQTLPLKDLRTIHLNKTAKLIAASLQMGGIIAKCDKTTCKTLYKIGLDLGLFFQIRD 218

Query: 226 DLLDCEE 232
           D++D  +
Sbjct: 219 DIIDATQ 225


>gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
           BAA-613]
          Length = 305

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 8/215 (3%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIEC 81
           L+ T    +T H   +  A+ Y++  GGK++R  L+ E   LF    L A +   AA+E 
Sbjct: 23  LIGTYLPEETGHQKTIFEAMNYSMKAGGKRLRPMLMQEMCRLFTGTLLEAVIPFMAAVEM 82

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKD 140
           IH  SL+HDDLP MD+  +RRGK +   +Y E   ++ G+ L+ YAFE  ++  +T +  
Sbjct: 83  IHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTGDALMMYAFETAANAFETSIDP 142

Query: 141 NIRSQL---MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACES 195
           +  S++   M  L    G+ GM+GGQ +D++     I   ++  I ++KTGAL+  +   
Sbjct: 143 DELSRIGRAMGILARKTGVYGMIGGQTVDVELAGGPIPGDKLEFIYRLKTGALIEASMLI 202

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           GA++  A++ + + +      +G+ FQ+ DD+LD 
Sbjct: 203 GAVLGGAAEEDCKIVESLAAKIGMAFQIQDDILDV 237


>gi|227893300|ref|ZP_04011105.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047]
 gi|227864880|gb|EEJ72301.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047]
          Length = 289

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 27/227 (11%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVN-HLTALRV 75
           ++DD L   A H+  +  D  +S I  Y+++ GGK++R  L     ++         +R+
Sbjct: 14  VIDDYL---AKHLADEVEDPKISQIMAYSVMAGGKRLRPLLFLATLNVLGKKIEEPEIRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----------EFIDETQVFMIQKMKT 185
              K      L   +T  +G  GM+GGQ LDI            +FI++     ++ +KT
Sbjct: 131 NSAK------LAAMITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINK-----MEWLKT 179

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+  + E  A+ A A+  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 180 GCLIQASVEMAAVYARATDIEQVKLVDFAKAFGRSYQIYDDLVDVVE 226


>gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
           (FPP synthase) [NC10 bacterium 'Dutch sediment']
          Length = 312

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 123/244 (50%), Gaps = 23/244 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L E    +D  L+  L Q +   +  H      A+RY++  GGK++R  L+         
Sbjct: 10  LDERRLLVDEALEQYLPQASDPPKEIHE-----AVRYSVFAGGKRLRPILILAATEAAGG 64

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL   AAIE IH YSLIHDDLP+MD+   RRG+ T H  Y E  AI+AG+ LLT A
Sbjct: 65  QMEQALGAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRLTCHKVYGEAMAILAGDALLTQA 124

Query: 128 FEIISSP---------------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDE 170
           F ++S+                K       R  ++  +    G +GM+GGQ++D+  +D 
Sbjct: 125 FILLSAENPPCPPLAKGGWGDLKGVYDSEARLMVIREIAEAAGSKGMVGGQVVDMLQEDR 184

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ID   +  + + KTGAL+      G I+A A   + E L  +GE +G+ FQ+ DD+LD 
Sbjct: 185 EIDLPTLTYLHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGERIGLAFQIVDDILDL 244

Query: 231 EEDL 234
           E  L
Sbjct: 245 EGSL 248


>gi|119945899|ref|YP_943579.1| geranyltranstransferase [Psychromonas ingrahamii 37]
 gi|119864503|gb|ABM03980.1| farnesyl-diphosphate synthase [Psychromonas ingrahamii 37]
          Length = 296

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 113/187 (60%), Gaps = 3/187 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           ALLGGK++R FLV     +   +  +   + AA+ECIH YSLIHDDLP+MD+  +RRG+ 
Sbjct: 41  ALLGGKRVRPFLVYAVGDMLGCSLQSLDPLAAAVECIHAYSLIHDDLPAMDDDDLRRGQM 100

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T H ++DE TAI+AG+ L T AF+IIS P   +    + +++  L    G  GM  GQ L
Sbjct: 101 TCHKKFDEATAILAGDALQTLAFDIISMPNKAITAQAQLKMVNFLAKAAGDHGMCAGQAL 160

Query: 166 DI--QDEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQ 222
           D+  +++ ++   +  I + KTGAL+  A +  A+  +   ++  + L  F + +G+ FQ
Sbjct: 161 DLVAENQSVNLVTLQKIHQAKTGALIKVAIQLAAMTKSDLHEDHFQLLNTFADAIGLAFQ 220

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 221 VQDDILD 227


>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
 gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
          Length = 296

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 124/226 (54%), Gaps = 14/226 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L +  +R++  LD         +  +  + L  A+RY+LL GGK++R  L      L   
Sbjct: 11  LGKAKERVEAALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGG 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+ LLT A
Sbjct: 64  EATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRA 123

Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           FE+++  SP    +  ++    LSL    G  G++GGQ++D++ E   +D   +  I   
Sbjct: 124 FEMVALRSPDVPAERLLKVVGELSLVA--GAPGLVGGQVVDLESEGKEVDLETLEYIHLH 181

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTGAL+     +GAI+  A +   + LR +   +G+ FQ+ DD+LD
Sbjct: 182 KTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILD 227


>gi|57505616|ref|ZP_00371543.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195]
 gi|57016163|gb|EAL52950.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195]
          Length = 268

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 5/184 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK  R+ L+      +       AL    A+E IH YSLIHDDLP+MDN   RR  PT+
Sbjct: 25  GGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYSLIHDDLPAMDNADFRRSTPTL 84

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           H  YDE TAI+ G+ L T AF ++S  +  L   I  +L+ +L  N GL GM+ GQ +D 
Sbjct: 85  HKSYDETTAILVGDALNTEAFLLLS--RLNLSATISLKLVETLAFNAGLNGMIIGQAIDC 142

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D+ ++  ++  +   KT  L+  + + G  +    +   ++L   G  LG+IFQ+ D
Sbjct: 143 YFEDQKLNLKELEFLHTHKTAKLIAASLKMGCQICELDETITKQLYELGLKLGLIFQIND 202

Query: 226 DLLD 229
           D++D
Sbjct: 203 DIID 206


>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
 gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
 gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
 gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
          Length = 295

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 128/229 (55%), Gaps = 12/229 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEGLFQAPSPEL-----SRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             + +P    ++   R Q++ +L    G  GM+GGQ +D+      +D+  +  + + KT
Sbjct: 122 TALLAPHLSSRNAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESD 230


>gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
 gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
          Length = 296

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 130/235 (55%), Gaps = 15/235 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +  E+ + +   ++  L +  +H+ +     L  A++Y LL GGK+IR FLV     +  
Sbjct: 3   QFSEDLQHVQQRINHFLAEQFAHLDSAPAP-LADAMKYGLLLGGKRIRPFLVYATGRMLG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +        AAIE IH YSLIHDDLP+MD+  +RRG  T HI +DE TAI+AG+ L  +
Sbjct: 62  ADLAQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQAF 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--- 183
           AFEI++   T L    +  L+ +L+   G++GM  GQ LD+    I E +V  +Q++   
Sbjct: 122 AFEILTDIPT-LSAEQKLALIKTLSAASGVKGMCLGQSLDL----ISEHKVISLQELEHI 176

Query: 184 ---KTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTGAL+  A   G I +   A +   ++L  +   +G+ FQ+ DD+LD E D
Sbjct: 177 HLNKTGALLTAALMMGFICSPHFAEKALAQQLERYATAIGLAFQVQDDILDIEGD 231


>gi|32471772|ref|NP_864766.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula
           baltica SH 1]
 gi|32397143|emb|CAD72450.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula
           baltica SH 1]
          Length = 317

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 13/217 (5%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           LQ A   +    +RL +AIRYA+L  GK++R  L    A     +  +A+    A+E IH
Sbjct: 35  LQAACEDRPGVPERLAAAIRYAVLAPGKRLRPMLTIMAAEACGGDAESAMPSAVAVEMIH 94

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+AG+ L + AF  +    +    +  
Sbjct: 95  AYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAGDALQSMAFAHLHHSTSDATKS-- 152

Query: 144 SQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDE--------TQVFMIQKMKTGALMCFAC 193
           + L+ +L    G  G++GGQ   LD +   +++          +  I   KTGAL     
Sbjct: 153 AALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGADAALKHLEAIHHRKTGALFTACA 212

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             GAI A A  N    L  + +  G+ FQ+ DDLLDC
Sbjct: 213 AMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDC 249


>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5]
 gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5]
          Length = 295

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 123/227 (54%), Gaps = 10/227 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           +  R+D  +  L    +  +      RL  A+RY+++ GGK++R  L             
Sbjct: 9   SQARVDAAMHTLFTAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPE 63

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  
Sbjct: 64  QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSA 123

Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +  P  +     IR +++ +L    G  GM+GGQ +D+      +D+  +  + + KTGA
Sbjct: 124 LLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGA 183

Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  +   GA+ +  A + E + L+ + + +G+ FQ+ DD+LD E D
Sbjct: 184 LIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESD 230


>gi|256545252|ref|ZP_05472617.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170]
 gi|256399079|gb|EEU12691.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170]
          Length = 277

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 121/231 (52%), Gaps = 22/231 (9%)

Query: 12  NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---- 65
           N ++ D IL  D  ++  A   +   ++ L  ++ YA   GK+IR  +  E   +     
Sbjct: 2   NKEKFDKILIADKNIIDMAMIKKFDEDNPLSESLIYASDSGKRIRPVVFLETIKMLLGEG 61

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +V+    + +  A+E +H YSL+HDD+P MDN   RRGK TVH +Y E  AI+ G+ LL+
Sbjct: 62  SVDE-KLIDLSLALEMVHAYSLVHDDMPCMDNDDYRRGKLTVHKKYGEDLAILVGDSLLS 120

Query: 126 YAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDI---QDEFIDETQVF 178
           YAFEII      L  +I  Q  L     L    G  GM+ GQ+ DI   +DE I+   + 
Sbjct: 121 YAFEII------LDLSIYDQRFLEAGKYLAKACGKDGMIKGQVFDIKSKKDENIE--YIL 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + K KT  L   A    A+ A+  +++ E+L  +   LG+ FQL DD+LD
Sbjct: 173 DVYKNKTARLFMAAIMMAALYANVEKDKLEKLENYAYYLGLAFQLQDDILD 223


>gi|186510058|ref|NP_188073.2| GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
          Length = 360

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 113/197 (57%), Gaps = 11/197 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 96  AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  Y E  A++AG+ LL  AFE    +SS     +  IR+  ++ L   IG  
Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLVAPERMIRA--VVELARAIGTT 213

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQM+D+  E ++  +V +     I   KT AL+  A   G IM   ++ E E+LR 
Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 274 YARCIGLLFQVVDDILD 290


>gi|291514401|emb|CBK63611.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301]
          Length = 323

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 114/201 (56%), Gaps = 16/201 (7%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L + I Y+L GG K++R  L+T    +F+ +   AL   AA+E  H ++L+HDD+  MDN
Sbjct: 27  LYAPIGYSLAGGGKRLRPMLLTLSCGIFSDDVKQALPAAAAVEVFHNFTLLHDDI--MDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKP+VH ++ +  AI++G+ ++ YA+ ++SS    L   +     LS  + + L+
Sbjct: 85  AAVRRGKPSVHAKWGQNVAILSGDAMMIYAYRLLSSVPANLLPQV-----LSTFNTMALE 139

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRC 212
            +  GQ  D+  +F  + +V +++ M     KT  L+  +   GA++  AS  +  RLR 
Sbjct: 140 -VCEGQQYDM--DFEQKPKVSVVEYMHMIELKTSVLLAGSVVIGAMLGGASDEDCRRLRR 196

Query: 213 FGENLGIIFQLADDLLDCEED 233
           F   LG+ FQL DDLLD   D
Sbjct: 197 FAVELGLAFQLQDDLLDSYGD 217


>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 356

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 117/231 (50%), Gaps = 14/231 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S +   SK ++ +LD+ +      ++ +       A+RY LL GGK++R  L      L 
Sbjct: 62  SYMIRKSKSVNEVLDEAVPLCEPVLKIRE------AMRYTLLSGGKRVRPMLCLAACELV 115

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                TA+    A+E IH  SLI DDLP MD+  +RRGKPT H  + E  AI+A + L+ 
Sbjct: 116 GGQESTAMPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVDALIA 175

Query: 126 YAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET---QVF 178
            A +  + S    +        +L +   +G +G++ GQ  D+  E   F ++T    + 
Sbjct: 176 LAIKHTVESTSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGLKHLE 235

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            I   KT AL+  A   GAIM   S  E ER+R +   +G++FQ+ DD+LD
Sbjct: 236 FIHIHKTAALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLD 286


>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 360

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 11/200 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   N  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 96  AVRYSLLAGGKRVRPMLCIASCELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDNADL 155

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  + E  A++AG+ LL  AFE   ++SS     +  IR+  +  L   IG  
Sbjct: 156 RRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVPPERMIRA--VAELARAIGTT 213

Query: 158 GMLGGQMLDIQDEFIDE-----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQM+D+  E ++       ++  I   KT AL+  A   G IM   ++ E E+LR 
Sbjct: 214 GLVAGQMIDLASERLNPHDAGLERLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +   +G++FQ+ DD+LD  E
Sbjct: 274 YARCIGLLFQVVDDILDVTE 293


>gi|116052080|ref|YP_789076.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254242726|ref|ZP_04936048.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
 gi|313109486|ref|ZP_07795442.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
 gi|115587301|gb|ABJ13316.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126196104|gb|EAZ60167.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
 gi|310881944|gb|EFQ40538.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
          Length = 295

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 10/224 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL   AFE+++ 
Sbjct: 67  AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
            +   +++     ML+ L    G  GM+GGQ +D+    +  D+  + ++ + KTGAL+ 
Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186

Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+ +  A       L  + E +G+ FQ+ DD+LD E D
Sbjct: 187 ASVRLGALASGRAEPAALAALERYAEAIGLAFQVQDDILDVESD 230


>gi|62959239|gb|AAY23727.1| farnesyl diphosphate synthase [Nocardia sp. JL-538]
          Length = 145

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 90/146 (61%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLPSMDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|327541916|gb|EGF28424.1| Polyprenyl synthetase [Rhodopirellula baltica WH47]
          Length = 315

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 16/215 (7%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL +A+RYA+L  GK++R  L    A     +  +A+    A+E IH YSLIHDDLP+M
Sbjct: 45  ERLAAAVRYAVLAPGKRLRPMLTIMAAEACGGDAESAMPSAVAVEMIHAYSLIHDDLPAM 104

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG+PT HI++DE TAI+AG+ L + AF  +    +    +  + L+ +L    G
Sbjct: 105 DDDDLRRGRPTTHIEFDEATAILAGDALQSMAFAHLHHSTSDATKS--AALIGTLATAAG 162

Query: 156 LQGMLGGQM--LDIQDEFIDE--------TQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             G++GGQ   LD +   +++          +  I   KTGAL       GAI A A  N
Sbjct: 163 PAGLVGGQADDLDAEKYTVEDFGGADAALKHLEAIHHRKTGALFTACAAMGAISAGADTN 222

Query: 206 EKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
               L  + +  G+ FQ+ DDLLDC   +E L K+
Sbjct: 223 AVSALTDYAKAFGLAFQITDDLLDCTSTDEQLGKR 257


>gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 301

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 126/231 (54%), Gaps = 10/231 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           ++++  + +D  L   LL   S     H      A+ YA+  GGK++R  +V E A +  
Sbjct: 11  EIRQRKEFVDNCLIGCLLSPDSDPPLIHQ-----AMHYAIFNGGKRLRPIMVLEGAKIAG 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+ V  A+E IH YSL+HDDLP MD+   RRG+PT H  + E  A++ G+ LLT 
Sbjct: 66  GEAEQAIPVACALEMIHSYSLVHDDLPCMDDDDFRRGQPTCHRVFGEANAVLTGDALLTA 125

Query: 127 AFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182
           AFE++S     + +K +   +++  +    G +GM+GGQ+LD++ E   ID   +  +  
Sbjct: 126 AFELLSEKNSVSGIKPDTTLRVIAEIARASGSRGMIGGQILDLEAEGKIIDYESLRKLHC 185

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +KTG L   A  +GAI+    +     L  + +N G+ FQ++DD+LD + D
Sbjct: 186 LKTGQLFRAALRTGAIVGGIGEKGLLALSDYADNFGLAFQISDDILDVQGD 236


>gi|326572218|gb|EGE22213.1| geranyltranstransferase [Moraxella catarrhalis BC8]
          Length = 328

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 122/246 (49%), Gaps = 36/246 (14%)

Query: 24  LLQTASHM------QTQHNDRLL--------------SAIRYALL-GGKKIRSFLVTECA 62
            +Q A H+      QT+H  +LL              +A RYA+  GGK++R  L     
Sbjct: 17  FIQNAKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKRVRPLLALSTF 76

Query: 63  SLF-----NVNHLTAL--------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
            +      + NH   L        R   A+E IH YSLIHDDLP MD+  +RRG+PT HI
Sbjct: 77  LMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHI 136

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y E  A++AG+ L + AFE++S    +   +      L+   +   + M+ GQMLDI+ 
Sbjct: 137 VYGEDIALLAGDALQSIAFEVLSEYYEEAPADEAVAYRLTQILSTRARRMVSGQMLDIKG 196

Query: 170 E--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           E   + + ++  I + KTGAL+  +   GA+ A A       L+ +   +G+ FQ+ DD+
Sbjct: 197 ENQVLTQDELEAIHRDKTGALIEASVMMGAVCAGAQTAALGHLKRYARAIGLAFQVQDDV 256

Query: 228 LDCEED 233
           LD   D
Sbjct: 257 LDITTD 262


>gi|126642791|ref|YP_001085775.1| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
          Length = 259

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 114/193 (59%), Gaps = 13/193 (6%)

Query: 47  LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP MDN  +RRG+P
Sbjct: 1   MLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQP 60

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDN--IRSQLMLSLTHNIGLQGM 159
           T H+ + E TA++AG+ L + AFE++ S     + Q  D   +  Q+ +  T +     M
Sbjct: 61  TCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATAS---SKM 117

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGEN 216
           + GQ+LD+Q E   I + ++  I + KTGAL+  A   GA+   +  ++   +LR +G+ 
Sbjct: 118 VCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQA 177

Query: 217 LGIIFQLADDLLD 229
           +G+ FQ+ DD+LD
Sbjct: 178 IGLAFQVQDDILD 190


>gi|194290326|ref|YP_002006233.1| geranyltranstransferase (=farnesyldiphosphate synthase)
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224161|emb|CAQ70170.1| geranyltranstransferase (=farnesyldiphosphate synthase)
           [Cupriavidus taiwanensis LMG 19424]
          Length = 294

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 114/228 (50%), Gaps = 9/228 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q    R +  L   L    +   T H      A+RYA L GGK++R  LV     +   
Sbjct: 8   MQAQGARTEAALQAALPDAGTVPHTLHE-----AMRYAALSGGKRVRPLLVHAAGEVSGA 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                     A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+ L T A
Sbjct: 63  APAACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQTQA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
           F +++  +  +   +R QL+  L    G  GM GGQ +D+Q+    +    +  + +MKT
Sbjct: 123 FIVLAGAEP-IAPAVRLQLVAELARASGSAGMAGGQAIDLQNVGRAMTRDALEAMHRMKT 181

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+           L  +   +G+ FQ+ DD+LD   D
Sbjct: 182 GALLRASVRMGALCGEIDAAGLAALDRYAAAVGLAFQVVDDILDVTAD 229


>gi|27228290|gb|AAN85596.1| Geranylgeranyl Pyrophosphate Synthase [Pantoea stewartii]
          Length = 303

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 12/226 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN--VNHLTA 72
           ID+ LD LL      +Q +  D + +A+R   L  GK+IR  L+   A      ++H   
Sbjct: 23  IDSRLDQLL-----PVQGE-RDCVGAAMREGTLAPGKRIRPMLLLLTARDLGCAISHGGL 76

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +  A+E +H  SLI DD+P MD+  +RRG+PT+H QY E  AI+A   LL+ AF +I+
Sbjct: 77  LDLACAVEMVHAASLILDDMPCMDDAQMRRGRPTIHTQYGEHVAILAAVALLSKAFGVIA 136

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190
             +  L    +++ +  L+  IG+QG++ GQ  D+   D+      + +  + KT  L C
Sbjct: 137 EAEG-LTPIAKTRAVSELSTAIGMQGLVQGQFKDLSEGDKPRSADAILLTNQFKTSTLFC 195

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + +  +I A+AS   +E L  F  +LG  FQL DDL D   D  K
Sbjct: 196 ASTQMASIAANASCEARENLHRFSLDLGQAFQLLDDLTDGMTDTGK 241


>gi|91776484|ref|YP_546240.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT]
 gi|91710471|gb|ABE50399.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT]
          Length = 296

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 133/234 (56%), Gaps = 15/234 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
           S  +   +R++  LD+LL   AS++      RL  A+RYA+LGG K++R+ L      L 
Sbjct: 6   SWARHTQQRMEHTLDNLL--PASYIAPT---RLHEAMRYAVLGGGKRVRALLAHAAGELC 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                      AA+E IH YSL+HDD+P MD+  +RRGKP+ H QYD+ TA++ G+ L T
Sbjct: 61  GAAPEKVDIAAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDALQT 120

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183
            AF+ +++P        + +++  L    G +GM GGQ +D+    + ++++++  +   
Sbjct: 121 LAFQSLATPGLCTDPGRQLEMVSLLAIASGSRGMAGGQAIDLDSVGKALEQSELEYMHIH 180

Query: 184 KTGALMCFACESGAIMAHASQN-EKERLRC---FGENLGIIFQLADDLLDCEED 233
           KTGAL+  A   G   AH + + ++ERL     + + +G+ FQ+ DD+LD E D
Sbjct: 181 KTGALIRAAALLG---AHCANDLDQERLHAIDHYAQAIGLAFQVVDDILDAEAD 231


>gi|218264432|ref|ZP_03478283.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222005|gb|EEC94655.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
           DSM 18315]
          Length = 324

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  LV    +L+  N   A++    +E  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPALVLMACNLYKENVDIAIKPALGLEVFHNFTLLHDDL--MDE 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
              RR KPTVH  +++ TAI++G+ +L  A+++I   K++ LK+      +L L     L
Sbjct: 85  ADKRRNKPTVHKVWNDNTAILSGDAMLIAAYQLIGETKSESLKE------ILDLFTRTAL 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + + GGQ  D++ E    + E +   + ++KT  L+  A + GAIM +A + + E L  F
Sbjct: 139 E-ICGGQQYDMEFESRTDVTEAEYIEMIRLKTAVLLACALKMGAIMGNAPEADAEALYQF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217


>gi|2497459|sp|Q45220|ISPA_BRAJA RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Geranyltranstransferase
 gi|529967|gb|AAC28894.1| putative dimethylallyltranstransferase; ORF6; similar to E. coli
           dimethylallyltranstransferase, Swiss-Prot Accession
           Number P22939 (Fujisaki et al., J. Biochem.
           108:995-1000(1990) [Bradyrhizobium japonicum USDA 110]
          Length = 332

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q+ +KR++  L  LL       +      L++A+RYA L GGK+ R+ L     +L + 
Sbjct: 37  MQDGAKRVEEALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLCLAAGALADT 91

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+ G+ L  +A
Sbjct: 92  PAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHA 151

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185
           F  ++S        I   L+  L   +  +G  GGQ +D+    + ++  ++  + +MK+
Sbjct: 152 FLTLASLNAPGDSPI--ALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKS 209

Query: 186 GALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ A         L C    +    G+  Q+ DD+LD   D
Sbjct: 210 GALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTAD 261


>gi|27377259|ref|NP_768788.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
 gi|27350402|dbj|BAC47413.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
          Length = 335

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 121/232 (52%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q+ +KR++  L  LL       +      L++A+RYA L GGK+ R+ L     +L + 
Sbjct: 40  MQDGAKRVEEALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLCLAAGALADT 94

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+ G+ L  +A
Sbjct: 95  PAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHA 154

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185
           F  ++S        I   L+  L   +  +G  GGQ +D+    + ++  ++  + +MK+
Sbjct: 155 FLTLASLNAPGDSPI--ALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKS 212

Query: 186 GALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ A         L C    +    G+  Q+ DD+LD   D
Sbjct: 213 GALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTAD 264


>gi|313887972|ref|ZP_07821650.1| putative geranyltranstransferase [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845927|gb|EFR33310.1| putative geranyltranstransferase [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 285

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 135/235 (57%), Gaps = 28/235 (11%)

Query: 20  LDDLLLQTASHMQT--------QHNDRLLSAIRYALL-GGKKIRSFL--VTECASLFNVN 68
           LD+LL +  +++ +        QH  +++ +++Y+L  GGK+IR  L  +T C   F+ +
Sbjct: 4   LDNLLEKFNNYLSSLLEYDNSPQH--KVIDSMKYSLFSGGKRIRPLLSLITFCE--FSED 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            L   L   AAIE IH YSLIHDDLP+MD+   RR KPT H  Y E  AI+AG+GLL  +
Sbjct: 60  SLDKILPFAAAIEMIHTYSLIHDDLPAMDDDDFRREKPTNHKVYSEGIAILAGDGLLNMS 119

Query: 128 FEI-------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VF 178
            EI       I  P+  LK  +R+  M  + +  G+ GM+GGQ +DI  +  D T+    
Sbjct: 120 MEILLRHIENIEDPE-DLKRAMRA--MKYIYNATGVNGMIGGQTIDISRDVSDYTEDDCE 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + K+KTGAL+  +   G I+A    +   +L  FGE++GI +Q  DDLLD E+D
Sbjct: 177 NMYKLKTGALIKASVVVGGIIAGLDPDNITKLARFGESIGIAYQFEDDLLDEEKD 231


>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
          Length = 352

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 16/208 (7%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T     ++ ++RY+LL GGK++R  +      +F      A+    AIE IH  SLIHDD
Sbjct: 81  TPETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAIEMIHTMSLIHDD 140

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISS-----PKTQLKDNIRS 144
           LP+MDN  +RRG PT H+ Y +  AI+AG+ LL+ +FE   + S     P  ++ + IR 
Sbjct: 141 LPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGSTAEGIPAERIVETIR- 199

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAH 201
                L   +G  G+ GGQ++D++ E    +   ++  I   KT  L+  +  +GA++A 
Sbjct: 200 ----RLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKLLEVSVAAGAVLAG 255

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           A++++  +   +  ++GI FQ+ADD+LD
Sbjct: 256 AAKDDVRQCETYANDIGIAFQVADDILD 283


>gi|218960663|ref|YP_001740438.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase)
           (Farnesyltranstransferase) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729320|emb|CAO80231.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase)
           (Farnesyltranstransferase) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 296

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 130/230 (56%), Gaps = 10/230 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L   ++E  + ++ ILD  L +   + +  H      A+RY++  GGK++R +L      
Sbjct: 7   LKKDMKEKQELVNIILDRFLPRKDEYPKDLHK-----AMRYSVFAGGKRLRPYLTMTAFE 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +FN N      V A IE IH YSLIHDDLP +DN   RRGK + H  + E  A++AG+ L
Sbjct: 62  MFNSNIELITPVAAGIEMIHTYSLIHDDLPDIDNDDFRRGKKSCHTIFGEGVALLAGDAL 121

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           L  AFE+I+    +L   +R Q +  L   +G++G++ GQM+DI+ E   +D+  +  I 
Sbjct: 122 LLSAFELITL--AELDAKLRVQFVHELAKEVGIKGLIAGQMVDIESEGKKVDKKTLHYIH 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + KT  L+  +   GA+   A + E + L  +G+ +G++FQ+ DDLLD E
Sbjct: 180 ENKTARLINLSLRFGALAGEAKEEELKILDEYGKLIGLVFQIVDDLLDIE 229


>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
          Length = 369

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 119/221 (53%), Gaps = 7/221 (3%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTAL 73
           +++  ++  +    +  ++ +++  ++RY++L  K  R      +  C ++       AL
Sbjct: 85  NSVRKEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGGSKQ-QAL 143

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E +H  SLIHDDLP MD+  IRRG+P+ H  +    A++AG+ L    FE I S
Sbjct: 144 PTACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAGDALFPLGFEYIVS 203

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC 190
             + +  +   +++  +   +G QGM+ GQ +D+    +   D + V  I + K G +  
Sbjct: 204 STSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSLVEFIHERKFGIMAE 263

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +  +G I+  A+  E ERLR +G ++G+++Q+ADD+L+ E
Sbjct: 264 CSAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDILEEE 304


>gi|293392228|ref|ZP_06636562.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952762|gb|EFE02881.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 296

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 14/204 (6%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++Y LL GGK+IR FLV     +   +        AAIE IH YSLIHDDLP+MD+
Sbjct: 33  LAEAMKYGLLLGGKRIRPFLVYATGKMLGADMAHLDYAAAAIEAIHAYSLIHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  T HI +DE TAI+AG+ L T AFEI++     L    +  L+ +L+   G++
Sbjct: 93  DELRRGHQTCHIAFDEATAILAGDALQTLAFEILTDIP-HLSAEQKLMLIKTLSAAAGVK 151

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMA--HASQNEKER 209
           GM  GQ LD+    I E ++  +Q++      KTGAL+  A + G I +   A     ++
Sbjct: 152 GMCLGQSLDL----ISEQKIISLQELEQIHLNKTGALLTAALKMGFICSPHFADAALAQQ 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +   +G+ FQ+ DD+LD E D
Sbjct: 208 LERYATAIGLAFQVQDDILDIEGD 231


>gi|261867966|ref|YP_003255888.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413298|gb|ACX82669.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 296

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 14/204 (6%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A++Y LL GGK+IR FLV     +   +        AAIE IH YSLIHDDLP+MD+
Sbjct: 33  LAEAMKYGLLLGGKRIRPFLVYATGKMLGADMAHLDYAAAAIEAIHAYSLIHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  T HI +DE TAI+AG+ L T AFEI++     L    +  L+ +L+   G++
Sbjct: 93  DELRRGHQTCHIAFDEATAILAGDALQTLAFEILTDIP-HLSAEQKLMLIKTLSAAAGVK 151

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMA--HASQNEKER 209
           GM  GQ LD+    I E ++  +Q++      KTGAL+  A + G I +   A     ++
Sbjct: 152 GMCLGQSLDL----ISEQKIISLQELEQIHLNKTGALLTAALKMGFICSPHFADAALAQQ 207

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +   +G+ FQ+ DD+LD E D
Sbjct: 208 LERYATAIGLAFQVQDDILDIEGD 231


>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
           acetoxidans DSM 684]
 gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
           acetoxidans DSM 684]
          Length = 297

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 129/220 (58%), Gaps = 7/220 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++ L QT    Q QH  +L  A+ Y++  GGK++R  L+         +    L    A
Sbjct: 14  VEEALAQTLPPKQ-QHPTQLHEAMHYSVFAGGKRLRPILMMAACEAVGGDIENVLPAACA 72

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP--KT 136
           +E IH YSLIHDDLP+MD+  +RRG+PT H  + E TAI+AG+ LLT AF ++S+P    
Sbjct: 73  MEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTEAFVVLSAPSDSV 132

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193
           Q+ D  R +++  L    G  GM+GGQ++D++ E +++     V  I   KTGAL+  + 
Sbjct: 133 QINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATVDYIHAHKTGALILASI 192

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +GA++  A+  + E L  FG+  G+ FQ+ADD+LD   D
Sbjct: 193 RAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGD 232


>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
           thaliana]
          Length = 360

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 11/197 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 96  AVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADL 155

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  Y E  A++AG+ LL  AFE   ++SS     +  IR+  ++ L   IG  
Sbjct: 156 RRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRA--VVELARAIGTT 213

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQM+D+  E ++  +V +     I   KT AL+  A   G IM   ++ E E+LR 
Sbjct: 214 GLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRK 273

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+ D
Sbjct: 274 YARCIGLLFQVVDDIPD 290


>gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
          Length = 297

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 111/200 (55%), Gaps = 5/200 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +L A+RY+L  GGK++R  L    A     +   A+    A+E IH YSLIHDDLP+MD+
Sbjct: 33  ILKAMRYSLFAGGKRLRPILCLAGAEAVGGDPRRAMFCACALEMIHTYSLIHDDLPAMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIG 155
              RRG PT H  + +  A++AG+GLLT A  +++       L      Q    +    G
Sbjct: 93  DDYRRGVPTNHKVFGQGMAVLAGDGLLTQAMVLLTDAAAVGDLPAERARQAANVVMRAAG 152

Query: 156 LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+GGQ  D+  E +  D   V  I   KTGAL+C + E+G I+A A ++   RL  +
Sbjct: 153 HLGMVGGQAADLLAETMEPDLAMVDYIHARKTGALICASLEAGGILAGADRDRLSRLVRY 212

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  +G+ FQ+ADDLLD E D
Sbjct: 213 GRRIGLAFQIADDLLDLEGD 232


>gi|195953616|ref|YP_002121906.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933228|gb|ACG57928.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 258

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 7/185 (3%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y    GK+IR  L        +++   A+ +G A+E IH YSLIHDD+P +DN   RRGK
Sbjct: 33  YVFQEGKRIRPVLCVIGGYACDLDEEDAITLGCAVEFIHNYSLIHDDMPELDNDDERRGK 92

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PT H  + +  A++AG+GLL+ AF+I+S+          ++++  ++ N G++GM+ GQ+
Sbjct: 93  PTCHKIFGQDIALLAGDGLLSLAFDILSNESLYKNPKNLAKVVNYVSKNAGIEGMVAGQV 152

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            DI+     E     +  +KT AL+  +    +I+     +  E+L   G N+G++FQL 
Sbjct: 153 YDIK----GEKDFLKVASLKTAALIKTSLVIPSILKGVDFSLYEKL---GHNIGVLFQLT 205

Query: 225 DDLLD 229
           DD  D
Sbjct: 206 DDYYD 210


>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
          Length = 345

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 10/201 (4%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A+RY LL  GK++R  L      L      TA+    AIE +H  SLI DDLP MD
Sbjct: 77  KIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMD 136

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-G 155
           N  +RRGKPT HI + E  AI+A   L+  A +  +S  +   D    +++ ++   +  
Sbjct: 137 NDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTS--STFADVPPERILKTVQEMVKA 194

Query: 156 LQGMLGGQMLDIQDE---FIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           ++G++ GQ  D+  E   F  +T    +  I   KT AL+  A   GAIM   S  E ER
Sbjct: 195 VEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIER 254

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           LR +   +G++FQ+ DD+LD 
Sbjct: 255 LRSYARCIGLMFQVVDDVLDV 275


>gi|325269799|ref|ZP_08136409.1| polyprenyl synthetase [Prevotella multiformis DSM 16608]
 gi|324987772|gb|EGC19745.1| polyprenyl synthetase [Prevotella multiformis DSM 16608]
          Length = 324

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 113/203 (55%), Gaps = 15/203 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   IRY L LGGK+IR  L+    +LF  +  T L    A+E  H Y+L+HDDL  MD+
Sbjct: 27  LYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSPACALETYHNYTLLHDDL--MDD 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+ TVH+++D  TAI++G+ +L  AFE +       L+D +R   + +L   IG 
Sbjct: 85  APLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCDDRHLRDVLRLFTVTAL--EIG- 141

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
                GQ  D++ E    + E +   + ++KT  L+  A + GAI+A A   + + L  F
Sbjct: 142 ----EGQQYDMEFEHRNDVTEAEYIEMIRLKTSVLLACAMKIGAILADAPSEDMDNLYKF 197

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
           GE +G+ FQL DD LD   D PK
Sbjct: 198 GEQIGLAFQLQDDYLDVYGD-PK 219


>gi|269123398|ref|YP_003305975.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314724|gb|ACZ01098.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 282

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 8/194 (4%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            LLGGK+IR  ++   A+++  +         +IE IH YSLIHDDLP MDN   RRG  
Sbjct: 37  VLLGGKRIRPSIMYILANVYKKDKKCIENEAVSIELIHAYSLIHDDLPCMDNDNYRRGNL 96

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +Y E  A++ G+ LLT AF +++  +   K +I     ++L++  G +GM+ GQ L
Sbjct: 97  TVHKKYGEANAVLVGDALLTLAFSVLAESEYSNKYSI-----VALSYYSGHKGMILGQYL 151

Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+ +E    I+  ++  I   KT  L+  + E  AI    +   +  LR +   LG+ +Q
Sbjct: 152 DLLNENKADINFDELMEIHLNKTAMLLMASVEIAAISLSINTEARNALRKYILYLGLAYQ 211

Query: 223 LADDLLDCEEDLPK 236
           + DD+L+ E    K
Sbjct: 212 IQDDILEMESSFEK 225


>gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75273683|sp|Q9LJY2|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
           mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
           AltName: Full=Dimethylallyltranstransferase 10; AltName:
           Full=Farnesyl diphosphate synthase 10; AltName:
           Full=Farnesyltranstransferase 10; AltName:
           Full=Geranyltranstransferase 10; Flags: Precursor
 gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
           synthetase/farnesyltranstransferase [Arabidopsis
           thaliana]
 gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
          Length = 344

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 10/201 (4%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A+RY LL  GK++R  L      L      TA+    AIE +H  SLI DDLP MD
Sbjct: 77  KIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMD 136

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-G 155
           N  +RRGKPT HI + E  AI+A   L+  A +  +S  +   D    +++ ++   +  
Sbjct: 137 NDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTS--STFADVPPERILKTVQEMVKA 194

Query: 156 LQGMLGGQMLDIQDE---FIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           ++G++ GQ  D+  E   F  +T    +  I   KT AL+  A   GAIM   S  E ER
Sbjct: 195 VEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIER 254

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           LR +   +G++FQ+ DD+LD 
Sbjct: 255 LRSYARCIGLMFQVVDDVLDV 275


>gi|73540584|ref|YP_295104.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134]
 gi|72117997|gb|AAZ60260.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134]
          Length = 294

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 120/232 (51%), Gaps = 9/232 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
             S ++    R +  LD  L    +   T H      A+RYA+LGG K++R  LV     
Sbjct: 4   FASWMRAQGARTEAALDQTLPNADTVPHTLHE-----AMRYAVLGGGKRVRPLLVHAAGE 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +         A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+ L
Sbjct: 59  VTGASAEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            T AF +++  ++ ++   R +L+  L    G  GM GGQ +D+Q+  + +    +  + 
Sbjct: 119 QTQAFIVLAQAQS-VQAEARLKLVAELAVASGSVGMAGGQAIDLQNVGKAMSRDALEAMH 177

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +MKTGAL+  +   GA+           L  +   +G+ FQ+ DD+LD   D
Sbjct: 178 RMKTGALLRASVRMGALCGEIDAQGLSALDRYAAAVGLAFQVVDDILDVTAD 229


>gi|325957123|ref|YP_004292535.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
 gi|325333688|gb|ADZ07596.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
 gi|327183847|gb|AEA32294.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1118]
          Length = 289

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 17/222 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRV 75
           ++DD L   A H+  + + + +S  + Y+++ GGK++R  L +    +L        +R+
Sbjct: 14  VIDDYL---AKHLADEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFI--DETQVFMIQKMKTGALMC 190
                   ++L+  +T  +G  GM+GGQ LDI    +E +  D   +  ++ +KTG L+ 
Sbjct: 131 NS------AELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQ 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + E  A+ A A+  E+ +L  + +  G  +Q+ DDL+D  E
Sbjct: 185 ASVEMAAVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDVVE 226


>gi|305665579|ref|YP_003861866.1| putative isoprenoid biosynthesis related protein [Maribacter sp.
           HTCC2170]
 gi|88710335|gb|EAR02567.1| putative isoprenoid biosynthesis related protein [Maribacter sp.
           HTCC2170]
          Length = 334

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 13/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ID    + +     + +T+    L   + Y L LGGK++R  L      +F  +H+ A+ 
Sbjct: 14  IDFYRTEFISYLEKNAKTREPLNLYKPMSYILGLGGKRLRPVLTLMTTEVFGKDHINAMD 73

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE  H +SL+HDD+  MD+  +RRGKPTVH ++D  T I++G+ +L  A+++  + 
Sbjct: 74  AALAIEIFHNFSLVHDDI--MDDAPLRRGKPTVHEKWDLNTGILSGDAMLIRAYQLFENY 131

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCF 191
           ++   D  R   +  L     L+ +  GQ  DI  E  ++  V    KM   KT  L+  
Sbjct: 132 ES---DTFRE--LAQLFSKTALE-VCEGQQYDIDFETREDVTVPEYLKMIEYKTAVLVAA 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A + G I+A+AS  +++ +  FG+NLG+ FQL DD LD   D PK
Sbjct: 186 AMKMGGIIANASSTDQDCIYDFGKNLGLAFQLQDDYLDAFGD-PK 229


>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
          Length = 360

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 110/192 (57%), Gaps = 4/192 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++RY+LL GGK+IR  L      L      TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 99  SMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 158

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  Y E  A++AG+ LL  AFE I++    +  +   +++  L   IG +G++
Sbjct: 159 RRGKPTNHKIYGEDVAVLAGDALLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLV 218

Query: 161 GGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ++DI  E I   D   +  I   KT AL+  +   GAI+  A   + E+LR F   +
Sbjct: 219 AGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCI 278

Query: 218 GIIFQLADDLLD 229
           G++FQ+ DD+LD
Sbjct: 279 GLLFQVVDDILD 290


>gi|15233848|ref|NP_195558.1| GGR (geranylgeranyl reductase); farnesyltranstransferase
           [Arabidopsis thaliana]
 gi|85680919|sp|Q39108|GGR_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase-related
           protein, chloroplastic; Flags: Precursor
 gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
           [Arabidopsis thaliana]
 gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
           [Arabidopsis thaliana]
 gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
 gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
           thaliana]
 gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
           thaliana]
 gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
 gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
           thaliana]
 gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
          Length = 326

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%)

Query: 31  MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +  +H   +  A+RY++L  G K+    +      LF  + L A     A+E +H  SLI
Sbjct: 66  IPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLI 125

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146
           HDDLP MD+  +RRGKP+ H  Y    AI+AG+ L   AF+ I S  P   +      +L
Sbjct: 126 HDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRL 185

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +  +   +G  GM  GQ +D++        +  +Q+ K GA+   +   G ++  A+++E
Sbjct: 186 ITEIARTVGSTGMAAGQYVDLEG---GPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDE 242

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            + LR +G  +G+++Q+ DD+ +
Sbjct: 243 LQSLRRYGRAVGMLYQVVDDITE 265


>gi|255037310|ref|YP_003087931.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950066|gb|ACT94766.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
          Length = 324

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 14/203 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y + LGGK+ R  L    AS+F+ +   A++   A+E  H ++L+HDD+  MD 
Sbjct: 27  LYEPISYIMSLGGKRFRPLLTLLAASIFDTDIDKAIKPAMAVEVFHNFTLMHDDI--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG PTVH ++D  TAI++G+ +L  A++++   PK QL    RS L      N   
Sbjct: 85  APLRRGMPTVHEKWDANTAILSGDVMLIRAYDLLLDIPKEQL----RSVLA---RFNRTA 137

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD+  E    + E +   + ++KT  L+ FA E G I+A A     + L   
Sbjct: 138 AEVCEGQQLDMNFEKRWDVTEAEYIGMIRLKTSVLLGFALELGGIIAGADDETVQLLYSA 197

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
           GEN+GI FQL DDLLD   D  K
Sbjct: 198 GENMGIGFQLKDDLLDVYGDPAK 220


>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
          Length = 326

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%)

Query: 31  MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +  +H   +  A+RY++L  G K+    +      LF  + L A     A+E +H  SLI
Sbjct: 66  IPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLI 125

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146
           HDDLP MD+  +RRGKP+ H  Y    AI+AG+ L   AF+ I S  P   +      +L
Sbjct: 126 HDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRL 185

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +  +   +G  GM  GQ +D++        +  +Q+ K GA+   +   G ++  A+++E
Sbjct: 186 ITEIARTVGSTGMAAGQYVDLEG---GPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDE 242

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            + LR +G  +G+++Q+ DD+ +
Sbjct: 243 LQSLRRYGRAVGMLYQVVDDITE 265


>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
 gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
          Length = 314

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 7/202 (3%)

Query: 34  QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           Q+ D++  A+RY++L  G K+    +      LF  N   A     A+E +H  SLIHDD
Sbjct: 43  QYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFPTACALEMVHSASLIHDD 102

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLS 149
           LP MD+   RRG+P+ H  Y    AI+AG+ L    F  I+S   + L    R   ++  
Sbjct: 103 LPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAE 162

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +   +G  GM  GQ LD++        V  +Q+ K G +   +   G ++A A  +E +R
Sbjct: 163 IARAVGSTGMAAGQFLDLEG---GPNSVEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQR 219

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
           LR +G  +G+++Q+ DD+L+ +
Sbjct: 220 LRRYGRAVGVLYQVVDDILEAK 241


>gi|160945195|ref|ZP_02092421.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442926|gb|EDP19931.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105573|emb|CBL03117.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii SL3/3]
          Length = 293

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 114/191 (59%), Gaps = 5/191 (2%)

Query: 42  AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A RY+LLGG K+IR+ L      +       A +  AA+E +HCYSLIHDDLP MDN  +
Sbjct: 35  AARYSLLGGGKRIRAILTLSVCDMLGGEMQVAAQFAAAVEMLHCYSLIHDDLPCMDNDDL 94

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+P+ H  + E TA++AG+ LLT AFE+I++        I      +L    G +GM+
Sbjct: 95  RRGRPSCHKAFSESTAMLAGDVLLTEAFEVIANASA--TPQICVAAARALGAGAGSRGMV 152

Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
            GQ LD++ E +   E Q+ +I + KTGAL+  A + GA  A A+  + + L  +   LG
Sbjct: 153 YGQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAAGATPQQCKILASYAYGLG 212

Query: 219 IIFQLADDLLD 229
           ++FQ+ DD+LD
Sbjct: 213 LVFQIVDDVLD 223


>gi|323344513|ref|ZP_08084738.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
 gi|323094640|gb|EFZ37216.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
          Length = 323

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L LGGK+IR  L+    +L+  +  + L    AIE  H Y+L+HDDL  MDN
Sbjct: 26  LYEPIKYVLSLGGKRIRPTLMLLAYNLYKDDPQSILSSACAIETYHNYTLLHDDL--MDN 83

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             IRRG+PTVH ++D  TAI++G+ +L  A+  ++    ++LK+ I   L       IG 
Sbjct: 84  AAIRRGRPTVHKKWDANTAILSGDSMLVLAYHYMAQCDGSKLKEVI--DLFTETALEIG- 140

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
                GQ LD+  E    + E +   + ++KT  L+  + + GAI+A +S  + + L  F
Sbjct: 141 ----EGQQLDMDFETRNDVTEAEYIEMIRLKTSVLLACSLKIGAILAGSSAEDADYLYRF 196

Query: 214 GENLGIIFQLADDLLDCEED 233
           GE +G+ FQL DD LD   D
Sbjct: 197 GEQIGLAFQLQDDFLDVYGD 216


>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
 gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
          Length = 301

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 130/235 (55%), Gaps = 14/235 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + E   R+D+ L +L   +    +T H      ++ Y+L+ GGK++R  LV         
Sbjct: 11  MNEICDRLDSELTNLFPPSWKVPETLHK-----SMSYSLMAGGKRMRPLLVIAACEAGGG 65

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+ V  A+E +H YSL+HDDLP+MD+   RRGKPT H  + E +AI+AG+ LLT+A
Sbjct: 66  SRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHA 125

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           F  I     Q    + ++ +LS+  ++    G +GM+GGQ+ D++ E       Q+  I 
Sbjct: 126 FYSIIQASRQF--GVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTTLEQLEYIH 183

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KT  L+ F+  +G  +A  ++ + E LR FG ++G+ FQ+ DD+LD   D  K
Sbjct: 184 LHKTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQDDILDLVGDESK 238


>gi|259046628|ref|ZP_05737029.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175]
 gi|259036793|gb|EEW38048.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175]
          Length = 301

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 11/231 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHM-----QTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           K + +S  +  ++  L    A+H+     +     RL  A+ YA+  GGK+IR  L    
Sbjct: 3   KEKRHSPMVKAVIQQLQQDVANHLTKLIEERPTEARLKEAMLYAVQSGGKRIRPLLTLAV 62

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            S     +  AL +  A+E IH YSLIHDDLP MD+  +RRG+PTVH  +DE TAI+AG+
Sbjct: 63  GSAGTSTNKAALDLACALEMIHTYSLIHDDLPGMDDDDMRRGRPTVHKAFDEATAILAGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179
            LLT AFE+ ++   + +  + +  +LS     G+ GM+ GQM DI  E +  T   M  
Sbjct: 123 ALLTLAFEVAANANLEARQLVEAVKILSSAS--GMSGMISGQMKDIASEEVTITLERMKE 180

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           I + KTG L+  A   G +    ++  KE    +  + G+ FQ+ +DL D 
Sbjct: 181 IHREKTGELLLAAVRLGNLFVDDAKM-KEAFVSYATHFGLAFQIQNDLQDV 230


>gi|315038641|ref|YP_004032209.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
 gi|312276774|gb|ADQ59414.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
          Length = 289

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 17/222 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRV 75
           ++DD L   A H+  + + + +S  + Y+++ GGK++R  L +    +L        +R+
Sbjct: 14  VIDDYL---ARHLADEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFI--DETQVFMIQKMKTGALMC 190
                   ++L+  +T  +G  GM+GGQ LDI    +E +  D   +  ++ +KTG L+ 
Sbjct: 131 NS------AELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQ 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + E  A+ A A+  E+ +L  + +  G  +Q+ DDL+D  E
Sbjct: 185 ASVEMAAVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDVVE 226


>gi|325858516|ref|ZP_08172620.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
 gi|325483013|gb|EGC86002.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
          Length = 324

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 120/225 (53%), Gaps = 15/225 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D ILD +     +    +    L   IRY L LGGK+IR  L+    +LF  +  T L  
Sbjct: 5   DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
             A+E  H Y+L+HDDL  MD+  +RRG+ TVH+++D  TAI++G+ +L  AFE +    
Sbjct: 65  ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
              L+D +R   + +L   IG      GQ  D++ E    + E +   + ++KT  L+  
Sbjct: 123 DRHLRDVLRLFTVTAL--EIG-----EGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A + GA++A A   + E L  FGE +G+ FQL DD LD   D PK
Sbjct: 176 AVKLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGD-PK 219


>gi|62959193|gb|AAY23704.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-25]
          Length = 145

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTTGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|327314324|ref|YP_004329761.1| polyprenyl synthetase [Prevotella denticola F0289]
 gi|326945935|gb|AEA21820.1| polyprenyl synthetase [Prevotella denticola F0289]
          Length = 324

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 120/225 (53%), Gaps = 15/225 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D ILD +     +    +    L   IRY L LGGK+IR  L+    +LF  +  T L  
Sbjct: 5   DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
             A+E  H Y+L+HDDL  MD+  +RRG+ TVH+++D  TAI++G+ +L  AFE +    
Sbjct: 65  ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
              L+D +R   + +L   IG      GQ  D++ E    + E +   + ++KT  L+  
Sbjct: 123 DRHLRDVLRLFTVTAL--EIG-----EGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A + GA++A A   + E L  FGE +G+ FQL DD LD   D PK
Sbjct: 176 AVKLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGD-PK 219


>gi|319947470|ref|ZP_08021702.1| geranyltranstransferase [Streptococcus australis ATCC 700641]
 gi|319746410|gb|EFV98671.1| geranyltranstransferase [Streptococcus australis ATCC 700641]
          Length = 295

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 6/201 (2%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSM 95
           RL+ +I Y++  GGK+IR  L+ E    F+   L A  +V AA+E IH  SLIHDDLP+M
Sbjct: 26  RLVESILYSVRAGGKRIRPLLLLELLEAFHAPILEAHFQVAAALEMIHTGSLIHDDLPAM 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRG+ T H ++ E  AI+AG+ L   AF  ++  +  L  +I+ QL+  L+   G
Sbjct: 86  DNDDYRRGQLTNHKKFGEDLAILAGDSLFLDAFGCVA--EADLPASIQVQLIALLSDASG 143

Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+ GQ+LD++ E    T  Q+ +I   KTG L+ +  ++  I+          L   
Sbjct: 144 TAGMVAGQVLDMEGEGASLTLDQLQVIHANKTGRLLAYPFQAAGILLELEPAVATLLEEI 203

Query: 214 GENLGIIFQLADDLLDCEEDL 234
           G +LG+ FQ+ DD+LD   D 
Sbjct: 204 GIHLGLAFQIRDDILDVTADF 224


>gi|288928474|ref|ZP_06422321.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331308|gb|EFC69892.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 324

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 12/199 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   IRY L +GGK+IR  L     +LF  +  + L     +E  H Y+L+HDDL  MDN
Sbjct: 27  LYEPIRYVLSIGGKRIRPALALLAYNLFKDDPESILAPACGLETYHNYTLLHDDL--MDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH ++D  TAI++G+ +L  A+++++       D  + + ++ L     L+
Sbjct: 85  AALRRGKPTVHKRWDANTAILSGDSMLVLAYQLVAQC-----DAAKLKPVMELFTETALE 139

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ  D+  E    + E +   + ++KT  L+  A + GA++A A Q + + L  FG
Sbjct: 140 -IGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACAMKMGALLADAPQRDADLLYKFG 198

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G+ FQL DD LD   D
Sbjct: 199 EQIGLAFQLQDDFLDVYGD 217


>gi|57641403|ref|YP_183881.1| bifunctional short-chain isoprenyl diphosphate synthase
           [Thermococcus kodakarensis KOD1]
 gi|37999032|dbj|BAD00093.1| isoprenyl diphosphate synthase [Thermococcus kodakaraensis]
 gi|57159727|dbj|BAD85657.1| bifunctional short-chain isoprenyl diphosphate synthase
           [Thermococcus kodakarensis KOD1]
          Length = 343

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 20/239 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63
           L ++++E +K +D ++ +L+ +       +    L  A R Y L GGK++R F+V   A 
Sbjct: 7   LFARIKEKAKDVDRVILELVPE-------KEPLELYKAARHYPLAGGKRVRPFVVLRAAE 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +   AL   A++E IH YSL+HDD+  MD   +RRG+PTVH  +    AI+AG+ L
Sbjct: 60  AVGGDPEKALYPAASVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKLWGVNMAILAGDLL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AFE I+  +   +   R   +L  T N+    +  GQ LDI+ E  +E  V    KM
Sbjct: 118 FSKAFEAIAKAEVPAEKKARILDVLVRTSNL----LCEGQALDIEFETKEEVTVEEYLKM 173

Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              KTGAL   + E GAI+    +     L  +G N+GI FQ+ DD+LD    EE L K
Sbjct: 174 ISGKTGALFQGSAEIGAIVGTEDEEYIGALSKWGMNVGIAFQIWDDVLDLIADEEKLGK 232


>gi|62959235|gb|AAY23725.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-475]
          Length = 147

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 84/136 (61%), Gaps = 4/136 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +R GKPTVH  YDE TA++AG+ L   AFEI++ P T     +RS+L+ +L    G+ GM
Sbjct: 12  LRHGKPTVHKVYDEATAVLAGDALHALAFEILADPGTCSDPFVRSELITTLGTASGMNGM 71

Query: 160 LGGQMLD-IQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GGQM+D + DE     D   +  +Q++KTGAL+  + E GAI+       +  LR +  
Sbjct: 72  AGGQMMDMVADEEGVEYDLHTITRLQQLKTGALLAASVEMGAILGRVPPEGRAHLRAYAR 131

Query: 216 NLGIIFQLADDLLDCE 231
           ++G+ FQ+ADD+LD E
Sbjct: 132 DIGLAFQIADDILDVE 147


>gi|296109469|ref|YP_003616418.1| Polyprenyl synthetase [Methanocaldococcus infernus ME]
 gi|295434283|gb|ADG13454.1| Polyprenyl synthetase [Methanocaldococcus infernus ME]
          Length = 317

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 9/199 (4%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + N+   +A      GGK+IR +L     +L   N    L    ++E IH Y+LIHDD+ 
Sbjct: 22  KDNNLYKAAKHLTFAGGKRIRPYLSILTYNLKKDNINEILPAAVSVELIHNYTLIHDDI- 80

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MDN  +RRGKPTVHI Y E  AI+AG+ L   AFE I +    +KD  ++  +L +   
Sbjct: 81  -MDNDELRRGKPTVHIAYGEEMAILAGDLLYAKAFEAIGN----IKDEKKAYKVLKVLSK 135

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
             +  +  GQ +D++ E    T  +   + K KTGAL+  + E G IMA  ++ E + ++
Sbjct: 136 ACVD-VCEGQAMDMEFESYWPTLEEYLEMIKKKTGALLEASAEIGGIMAEFNEEEMKAIK 194

Query: 212 CFGENLGIIFQLADDLLDC 230
            + E +G+ FQ+ DD+LD 
Sbjct: 195 SYAEKIGLTFQIQDDILDI 213


>gi|312884946|ref|ZP_07744636.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367423|gb|EFP94985.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 294

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 127/239 (53%), Gaps = 16/239 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALLG-GKKIRSFLV 58
           MN    S  Q NS  ++  L+ L           H D  L+ A++Y+LL  GK++R FLV
Sbjct: 1   MNEVFTSLKQRNSLELEKWLETL----------GHPDLSLVQAMKYSLLSEGKRVRPFLV 50

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                +            AAIECIH YSLIHDDLP+MD+  +RRG PT H+Q+DE TAI+
Sbjct: 51  YATGQILGSAVEDLDTAAAAIECIHTYSLIHDDLPAMDDDDLRRGHPTCHMQFDEATAIL 110

Query: 119 AGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDET 175
           AG+ L T AF I+S  K   K +  R +++  L +  G +GM  GQ LD+  E   +   
Sbjct: 111 AGDALQTLAFTILSEGKLSPKAEKNRIKMVQVLANASGARGMCLGQALDLNAEGKSVSLN 170

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEED 233
           Q+  I   KTG L+  A + GA+   +  +     L  + E +G+ FQ+ DD+LD   D
Sbjct: 171 QLEAIHVNKTGELIKAAVKLGALSCGSLDDVTATHLDRYAEAIGLAFQVQDDILDLVSD 229


>gi|213026630|ref|ZP_03341077.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 162

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 99/158 (62%), Gaps = 4/158 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP+
Sbjct: 3   NTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPA 62

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHN 153
           MD+  +RRG PT HI++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L + 
Sbjct: 63  MDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANA 122

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
            G+ GM GGQ LD+  E   I    +  I + KTGAL+
Sbjct: 123 SGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALI 160


>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
           thaliana]
          Length = 326

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 7/203 (3%)

Query: 31  MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +  +H   +  A+RY++L  G K+    +      LF  + L A     A+E +H  SLI
Sbjct: 66  IPVKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLI 125

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146
           HDDLP MD+  +RRGKP+ H  Y    AI+AG+ L   AF+ I S  P   +      +L
Sbjct: 126 HDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRL 185

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +  +   +G  GM  GQ +D++        +  +Q+ K GA+   +   G ++  A+++E
Sbjct: 186 ITEIARTVGSTGMAAGQYVDLEG---GPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDE 242

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            + LR +G  +G+++Q+ DD+ +
Sbjct: 243 LQSLRRYGRAVGMLYQVVDDITE 265


>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
           E681]
 gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           [Paenibacillus polymyxa E681]
          Length = 307

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 15/208 (7%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++ Y+L  GGK++R  LV   A  F  +   AL V  A+E +H YSLIHDDLP+MD+
Sbjct: 42  LRESMNYSLTAGGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDD 101

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNI-- 154
              RRGK T H  Y E  A++AG+ LLT+AF  I+ + +   +  + S  +LS+  ++  
Sbjct: 102 DDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSIVQAGR---RHGVSSDALLSIVEDLSE 158

Query: 155 --GLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             G +GM+GGQ+ D+  E     I+E +   I   KT  L+ F+  +G  +  A +++ E
Sbjct: 159 MSGARGMVGGQVADMSGEQGMTGIEELE--FIHLHKTADLIIFSLLAGGRIGGADKSQLE 216

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236
            LR FG +LG+ FQ+ DD+LD   D  K
Sbjct: 217 ALRRFGRDLGLAFQIQDDILDLIGDESK 244


>gi|223986292|ref|ZP_03636304.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
           12042]
 gi|223961731|gb|EEF66231.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
           12042]
          Length = 280

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 9/194 (4%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+L+G GK++R  L+   A  + ++         A+E +H YSLIHDDLP+MDN   
Sbjct: 24  AMEYSLMGKGKRLRPQLLFAVAEGYGLSAQAGFMAAGALEMMHTYSLIHDDLPAMDNDDY 83

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGM 159
           RRG+ T H Q++E TAI+AG+GLLT AF + ++      D +++ +++  L    G +GM
Sbjct: 84  RRGRKTCHKQFNEATAILAGDGLLTQAFVLAANSS---DDPVKALKIVKELASAGGAEGM 140

Query: 160 LGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + GQ+ D++ E    +   Q+  +   KTG L       GAI+A        + R  G  
Sbjct: 141 ILGQIKDLEAENSQAVTLEQLKEVHLYKTGCLFTAPLVMGAILA-GQDAAIPQWRRIGAL 199

Query: 217 LGIIFQLADDLLDC 230
           +G+ FQ+ DD+LD 
Sbjct: 200 MGLAFQIQDDILDV 213


>gi|332519159|ref|ZP_08395626.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045007|gb|EGI81200.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 324

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 14/210 (6%)

Query: 25  LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+T S ++   N  L   I Y L LGGK++R  L    A +FN ++  AL    +IE  H
Sbjct: 15  LETFSKIREPKN--LYQPIDYILKLGGKRLRPVLTLMTAEVFNYDYKKALDAALSIEVFH 72

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            +SL+HDD+  MD+  +RRG+ TVH ++D  TAI++G+ +L  A+++  +      D+  
Sbjct: 73  NFSLVHDDI--MDDAPLRRGEQTVHEKWDVNTAILSGDAMLIMAYQLFENY-----DSKT 125

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMA 200
            Q +  L     L+ +  GQ  D+  E  D+  +    KM   KT  L+  A + GAI+A
Sbjct: 126 FQALAKLFSKTALE-VCEGQQYDVDFETRDDVTISEYLKMIEYKTAVLVGAAMKMGAIVA 184

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AS  +++ +  FG  LGI FQL DD LD 
Sbjct: 185 KASNEDQDGIYNFGRLLGIAFQLQDDYLDA 214


>gi|304395256|ref|ZP_07377140.1| Polyprenyl synthetase [Pantoea sp. aB]
 gi|304357509|gb|EFM21872.1| Polyprenyl synthetase [Pantoea sp. aB]
          Length = 303

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 105/195 (53%), Gaps = 5/195 (2%)

Query: 46  ALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A     +V     L +  A+E +H  SLI DD+P MD+  +RRG
Sbjct: 49  ALAPGKRIRPLLLLLAARDLGCDVTPTGLLDLACAVEMVHAASLILDDMPCMDDAQLRRG 108

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT+H QY E  AI+A   LL+ AF +++  +  L    R+  +  L+H +G+QG++ GQ
Sbjct: 109 RPTIHCQYGEHVAILAAVALLSKAFGVVAMAEG-LTAAARADAVAELSHAVGMQGLVQGQ 167

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             D+   D+      + M    KT  L C + +  +I+A AS   +E+L  F  NLG  F
Sbjct: 168 FKDLSEGDKPRSADAILMTNHYKTSTLFCASMQMASIVAEASAETREQLHRFSLNLGQAF 227

Query: 222 QLADDLLDCEEDLPK 236
           QL DDL D   D  K
Sbjct: 228 QLLDDLTDGMADTGK 242


>gi|146343288|ref|YP_001208336.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278]
 gi|8650415|gb|AAF78199.1|AF218415_1 geranylgeranyl synthase [Bradyrhizobium sp. ORS278]
 gi|146196094|emb|CAL80121.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           (Farnesyltranstransferase) [Bradyrhizobium sp. ORS278]
          Length = 316

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 2/188 (1%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+ R  LV    S   V     L    AIE IH  SL+ DDLP MD+   RR +P 
Sbjct: 51  LAGGKRYRGMLVLALGSDLGVPEEQLLSSAVAIETIHAASLVVDDLPCMDDARRRRSQPA 110

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            H+ + E TAI++   L+  A E+++  + QL    RS ++ +L+H IG Q + GGQ  D
Sbjct: 111 THVAFGEATAILSSIALIARAMEVVARDR-QLSPASRSSIVDTLSHAIGPQALCGGQYDD 169

Query: 167 IQDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +   +    Q  + + + KT AL   A    A++A        R+   G+ LG+ FQ+ D
Sbjct: 170 LYPPYYATEQDLIHRYQRKTSALFVAAFRCPALLAEVDPETLLRIARAGQRLGVAFQIFD 229

Query: 226 DLLDCEED 233
           DLLD   D
Sbjct: 230 DLLDLTGD 237


>gi|14521122|ref|NP_126597.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Pyrococcus abyssi GE5]
 gi|5458339|emb|CAB49828.1| idsA-like multifunctional short chain isoprenyl diphosphate
           synthase [Pyrococcus abyssi GE5]
          Length = 346

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 125/238 (52%), Gaps = 18/238 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L ++++E +K +D  L +L+ +    +  +      +A  Y L GGK+IR F+V      
Sbjct: 11  LFNRIKERAKLVDEKLFELIPEKEPKVLYE------AARHYPLAGGKRIRPFVVLTATEA 64

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              N L A+    AIE IH YSL+HDD+  MD    RRGKPTVH  +    AI+AG+ L 
Sbjct: 65  VGGNALKAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHKVWGINMAILAGDLLF 122

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183
           + AFE IS  + ++    +++++ ++        +  GQ LD++ E  +   +    +M 
Sbjct: 123 SKAFEAIS--RAEISPEKKAKVLETIVK--ASNELCEGQALDLEFENREMVSIEEYMRMI 178

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             KTGAL   + + G I+   ++   E L  +G N+G+ FQ+ DD+LD    EE L K
Sbjct: 179 SGKTGALFDASAKVGGIVGTENEEYIEALSRWGRNVGMAFQIWDDVLDLIADEEKLGK 236


>gi|300770896|ref|ZP_07080773.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762169|gb|EFK58988.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 325

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 15/206 (7%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDD 91
           Q    +   IRY L L GK++R  L    A LF    +  +   A AIE  H +SLIHDD
Sbjct: 22  QEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFSLIHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150
           +  MD   +RRG+ TVH ++D+  AI++G+GLL  A+E ++  PK  L D       L  
Sbjct: 82  I--MDKAPLRRGQLTVHEKWDDSVAILSGDGLLVKAYEQVAKCPKENLLD-------LLT 132

Query: 151 THNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T N     +  GQ LD+  E ++   E Q   + ++KT  L+  A   GAI+  AS  ++
Sbjct: 133 TFNKVATEVCEGQQLDMDFESLNQVTEAQYLHMIRLKTSVLLGGALRMGAIIGQASVEQQ 192

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E +  FG N+GI FQL DD+LD   D
Sbjct: 193 ELIYDFGVNVGIAFQLQDDILDVYGD 218


>gi|154491788|ref|ZP_02031414.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC
           43184]
 gi|154088029|gb|EDN87074.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC
           43184]
          Length = 324

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  LV    +L+  N  TA+     +E  H ++L+HDDL  MD+
Sbjct: 27  LYDPIEYILSLGGKRIRPALVLMACNLYKENVDTAVNPALGLEVFHNFTLLHDDL--MDD 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
              RR KPTVH  ++  TAI++G+ +L  A+++I   +++ LK+      +L L     L
Sbjct: 85  ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGETESESLKE------ILDLFTRTAL 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + + GGQ  D++ E    + E +   + ++KT  L+  A + GAIM +A + + E L  F
Sbjct: 139 E-ICGGQQYDMEFESRTDVTEEEYIEMIRLKTAVLLACALKMGAIMGNAPKADAETLYQF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217


>gi|303237329|ref|ZP_07323899.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
 gi|302482716|gb|EFL45741.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
          Length = 324

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 18/202 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L LGGK+IR  L+    +L+  N  T L    A+E  H Y+L+HDDL  MD 
Sbjct: 27  LYEPIKYVLDLGGKRIRPILMMLSYNLYKENPKTILSSACALETYHNYTLLHDDL--MDE 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+ TVH +++   AI++G+ +L  A+E ++   T+       Q +L+L     LQ
Sbjct: 85  APLRRGQQTVHTKWNNNQAILSGDSMLVLAYERLAQVDTK-----HLQAVLNLFTETALQ 139

Query: 158 GMLG-GQMLDIQ-----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
             +G GQ  D++     D  +DE  + MI ++KT  L+  A + GA++A AS  + E L 
Sbjct: 140 --IGEGQQYDMEFEHRNDVTVDEY-IEMI-RLKTSVLLACATKMGALLADASAEDAENLY 195

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FGE +G+ FQL DD LD   D
Sbjct: 196 KFGEQIGLAFQLQDDYLDVYGD 217


>gi|288818510|ref|YP_003432858.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
           TK-6]
 gi|288787910|dbj|BAI69657.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
           TK-6]
 gi|308752100|gb|ADO45583.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 264

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 7/187 (3%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y    GK+IR   +   ++    N   A+ VG AIE IH YSL+HDDLP++DN   RRGK
Sbjct: 32  YVFQEGKRIRPLFLCAVSNALGGNLQDAITVGCAIEFIHNYSLVHDDLPALDNDDFRRGK 91

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGG 162
           P+ H+ + E  AI+AG+ LL  AFE +S+ +    L +     ++  ++ + G QGM+GG
Sbjct: 92  PSCHVLFGEDMAILAGDALLNLAFETLSNRENFISLSEKDLIYIIRLVSESSGFQGMVGG 151

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q++D++   + +     ++K  +     FAC  G I++   +   E L   G  +G++FQ
Sbjct: 152 QVMDVKK--LGDPWSISLKKTASMFSAVFAC--GGIISKKYER-VEYLSKAGTQVGLLFQ 206

Query: 223 LADDLLD 229
           L DD  D
Sbjct: 207 LIDDYKD 213


>gi|262199070|ref|YP_003270279.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365]
 gi|262082417|gb|ACY18386.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365]
          Length = 291

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 119/232 (51%), Gaps = 16/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           L E    ID  LD   LQ      T+   RLL A+RYA LG GK++R  L          
Sbjct: 29  LAEVRPEIDAYLD-ACLQIPGSAATE---RLLEAMRYAALGPGKRLRPALTLAACEAVGG 84

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +  +AL   AA+E +H Y+L+HDDLP MD+   RRG+PTVH+ YDE  A++AG+ LL+ A
Sbjct: 85  DRASALPAAAAVELLHTYTLVHDDLPCMDDDDERRGRPTVHVAYDEALAVLAGDALLSEA 144

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----MIQKM 183
           F +++    +  D +       L    G   +L GQ+ D+  E  +E   F     +   
Sbjct: 145 FGVLAKLGPRAGDAV-----AVLARRAGTAELLAGQVHDLVIEAREEAPSFEELEALHAA 199

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KTGAL   A E GAI   AS  ++  L  +G  +G+ FQ ADD  D   D P
Sbjct: 200 KTGALFAAAVELGAIAGGASAEDRANLARYGLAIGVAFQHADDRDDG--DFP 249


>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
          Length = 180

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 5/174 (2%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP MDN   R
Sbjct: 1   MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGML 160
           RGKPT H  + E TA++AG+ LL++AFE I+   ++   + R+  ++S L   I  QG++
Sbjct: 61  RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120

Query: 161 GGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           GGQ++DI    D  +D   +  I   KT  L+  +  +G I+  A+++E  R+R
Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIR 174


>gi|117509|sp|P21684|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; AltName: Full=Farnesyltranstransferase
 gi|216682|dbj|BAA14124.1| crtE [Pantoea ananatis]
 gi|325559605|gb|ADZ30887.1| geranylgeranyl pyrophosphate synthase [MoClo level 2 destination
           vector pL2-1]
 gi|325559616|gb|ADZ30895.1| geranylgeranyl pyrophosphate synthase [MoClo end-linker vector
           pELR-1]
          Length = 302

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A      V+H   L +  A+E +H  SLI DD+P MD+  +RRG
Sbjct: 48  ALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRG 107

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT+H  Y E  AI+A   LL+ AF +I+     L    +++ +  L++ IG+QG++ GQ
Sbjct: 108 RPTIHSHYGEHVAILAAVALLSKAFGVIADADG-LTPLAKNRAVSELSNAIGMQGLVQGQ 166

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             D+   D+      + M    KT  L C + +  +I+A+AS   ++ L  F  +LG  F
Sbjct: 167 FKDLSEGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAF 226

Query: 222 QLADDLLDCEEDLPK 236
           QL DDL D   D  K
Sbjct: 227 QLLDDLTDGMTDTGK 241


>gi|282859641|ref|ZP_06268743.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
 gi|282587559|gb|EFB92762.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
          Length = 324

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 12/221 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           + ILD +    A+    +    L   I+Y L LGGK+IR  L+    +L+  N    L  
Sbjct: 5   EEILDKVNQYIANLAYEREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNLYKDNPEDILAQ 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E  H Y+L+HDDL  MDN  +RRG  TVH +++   AI++G+ +L  AFE I+S  
Sbjct: 65  ACGLETYHNYTLLHDDL--MDNAPLRRGHQTVHEKWNANAAILSGDTMLVLAFERIASG- 121

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
               D  + + +L+L     L+ +  GQ LD++ E    + E +   + ++KT  L+  A
Sbjct: 122 ----DPAQLKALLNLFTVTALE-IGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSVLLACA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GAI+A AS+ +   L  FGE +G+ FQL DD LD   D
Sbjct: 177 LKMGAILAEASEEDARNLYIFGEKIGLAFQLQDDYLDVYGD 217


>gi|260599331|ref|YP_003211902.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis
           z3032]
 gi|260218508|emb|CBA33693.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis
           z3032]
          Length = 338

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLV--TECASL 64
           +LQ     + T LD+LL         Q  D + +A+R  AL  GK++R  L+  T C   
Sbjct: 51  ELQALHDALQTRLDELL------PPGQERDLVCAAMREGALTPGKRVRPLLLILTACDLG 104

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            + +    + +  A+E +H  SL+ DD+P MDN  +RRGKPT+H QY E  AI+A   LL
Sbjct: 105 CDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAILAAVALL 164

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           + AF +I+   + L D+ ++Q +  L+  +GLQG++ GQ  D+ +  +      +     
Sbjct: 165 SRAFGVIAQ-ASPLSDSCKTQAVSELSSAVGLQGLVQGQFRDLSEGNQARSAEAILATND 223

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KT  L     +  AI A AS + + +LR F  +LG  FQL DDL D
Sbjct: 224 LKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQLLDDLAD 270


>gi|327402903|ref|YP_004343741.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
 gi|327318411|gb|AEA42903.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
          Length = 322

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 14/201 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L   +RY L LGGK++R  L      LF +++  +L     IE  H +SLIHDD+  MD
Sbjct: 26  KLYDPLRYFLSLGGKRMRPILTLISGELFQISNEESLSAALTIELFHNFSLIHDDI--MD 83

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              +RRGKPTVHI+++   AI++G+ L    ++ ++    +     R  ++L   +   +
Sbjct: 84  EAPVRRGKPTVHIKWNSSVAILSGDVLFVEGYQQLAKYTDK-----RLPILLKRFNETAI 138

Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           + +  GQ LD+    +D+  +E  + MI ++KT  L+  A E GAI+ + S+  +  L  
Sbjct: 139 E-VCQGQQLDMDFESRDDVTEEAYIEMI-RLKTSVLLGCALEFGAILGNQSEETRNHLYH 196

Query: 213 FGENLGIIFQLADDLLDCEED 233
           FG +LGI FQ+ DD+LD   D
Sbjct: 197 FGVSLGIAFQIQDDILDLYGD 217


>gi|62959179|gb|AAY23697.1| farnesyl diphosphate synthase [Bacillus sp. JL-39]
 gi|62959189|gb|AAY23702.1| farnesyl diphosphate synthase [Kocuria sp. JL-51]
 gi|62959199|gb|AAY23707.1| farnesyl diphosphate synthase [Rhodococcus sp. JL-61]
 gi|73811207|gb|AAY23722.1| farnesyl diphosphate synthase [Sagittula sp. JL-351]
          Length = 145

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDLPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68]
 gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
 gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
          Length = 289

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCY 85
           A   Q Q  +RL  ++ Y+L  GGK+IR  L+      F +    A  +V A +E IH  
Sbjct: 14  ADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAACVELIHTG 73

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN   RRG+ T H  YDE TAI+AG+ L    F  ++  +  L       
Sbjct: 74  SLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--QVDLPAETILA 131

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+  L+   G  GM+ GQ+LD+  E  + T  Q+  I   KTG L+ F   +  ++A  S
Sbjct: 132 LVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQS 191

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
                 LR  G+ +G+ FQ+ DD+LD 
Sbjct: 192 DVVINHLRQAGQLIGLAFQVRDDILDV 218


>gi|295425229|ref|ZP_06817932.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664]
 gi|295065005|gb|EFG55910.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664]
          Length = 289

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 24/216 (11%)

Query: 30  HMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHL------TALRVGAAIEC 81
           H+  + +D+ +S I  Y+++ GGK++R  L      L  +N L        +R+   IE 
Sbjct: 22  HLANEVDDQKISQIMAYSVMAGGKRLRPLLF-----LATLNTLGKEITEDEIRIACGIEL 76

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP+MDN   RRGK T H ++ E  +I+AG+ LL    + I+         
Sbjct: 77  IHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAESILAGDALLPMGIQWIAEGSKS---- 132

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESG 196
             ++L+  +T  +G  GM+GGQ LDI     Q    D   +  ++ +KTG L+  + +  
Sbjct: 133 --AELVQIITQAVGPNGMVGGQYLDIDSTNNQSVAGDAKFINRMEWLKTGCLIEASVKMA 190

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A++  ASQ E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 191 AVLVGASQIEEVKLVDFAKVFGRSYQIYDDLVDVVE 226


>gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
 gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
          Length = 289

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCY 85
           A   Q Q  +RL  ++ Y+L  GGK+IR  L+      F +    A  +V A +E IH  
Sbjct: 14  ADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAACVELIHTG 73

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN   RRG+ T H  YDE TAI+AG+ L    F  ++  +  L       
Sbjct: 74  SLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--QVDLPAETILA 131

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+  L+   G  GM+ GQ+LD+  E  + T  Q+  I   KTG L+ F   +  ++A  S
Sbjct: 132 LVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQS 191

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
                 LR  G+ +G+ FQ+ DD+LD 
Sbjct: 192 DVVINHLRQAGQLIGLAFQVRDDILDV 218


>gi|153810474|ref|ZP_01963142.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174]
 gi|149833653|gb|EDM88734.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174]
          Length = 263

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 112/197 (56%), Gaps = 6/197 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+ Y++  GGK++R  L+ E   LF  +   A    A IE IH +SLIHDDLP++DN
Sbjct: 36  MAQAMNYSMCAGGKRLRPILLLETLRLFGGDEKLAEPFMAGIEMIHTHSLIHDDLPAIDN 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIG 155
              RRG+ T H  Y E   +++G  LL YA+E +  +   T  KD +   + + +    G
Sbjct: 96  DDYRRGRLTTHKVYGEAMGVLSGVTLLNYAYETMFRAFELTDDKDRVIRAVRI-MAEKTG 154

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + GMLGGQ +D++++   +++  +  I + KT AL+  +  +GA++A A + +   +   
Sbjct: 155 IYGMLGGQSVDVENDGKPLEKDLLDYIYEHKTSALIEASMMAGAVLAGADEEQTSMIEQA 214

Query: 214 GENLGIIFQLADDLLDC 230
             ++G+ FQ+ DD+LD 
Sbjct: 215 ASDIGLAFQIQDDILDV 231


>gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
 gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
          Length = 295

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 127/227 (55%), Gaps = 16/227 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+DT L+ L     + +     +RL  A+RY+++ GGK++R  LV         +   A 
Sbjct: 12  RVDTALEQLFQAPRTEL-----ERLYQAMRYSVMNGGKRVRPLLVYAACEALEGDIERAD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE +AI+AG+ L + AF +++ 
Sbjct: 67  GAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDALQSLAFGVLAD 126

Query: 134 PKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
            +   ++   R Q++  L+   G  GM+GGQ +D+      +D+  + ++ + KTGAL+ 
Sbjct: 127 RRRNPQNTETRLQMVELLSQAAGPAGMVGGQAIDLGSVGLQLDQQALEIMHRHKTGALIE 186

Query: 191 FACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEED 233
            +   GA+   AS N  E  R     +   +G+ FQ+ DD+LD E D
Sbjct: 187 ASVALGAL---ASGNTDELARKALLQYSRAIGLAFQVQDDILDVESD 230


>gi|327396572|dbj|BAK13993.1| geranylgeranyl pyrophosphate synthetase CrtE [Pantoea ananatis
           AJ13355]
          Length = 302

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A      V+H   L +  A+E +H  SLI DD+P MD+  +RRG
Sbjct: 48  ALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRG 107

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT+H  Y E  AI+A   LL+ AF +I+     L    +++ +  L++ IG+QG++ GQ
Sbjct: 108 RPTIHSHYGEHVAILAAVALLSKAFGVIADADG-LTPLAKNRAVSELSNAIGMQGLVQGQ 166

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             D+   D+      + M    KT  L C + +  +I+A+AS   ++ L  F  +LG  F
Sbjct: 167 FKDLSEGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAF 226

Query: 222 QLADDLLDCEEDLPK 236
           QL DDL D   D  K
Sbjct: 227 QLLDDLTDGMTDTGK 241


>gi|227537499|ref|ZP_03967548.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227242636|gb|EEI92651.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 325

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 111/206 (53%), Gaps = 15/206 (7%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDD 91
           Q    +   IRY L L GK++R  L    A LF    +  +   A AIE  H +SLIHDD
Sbjct: 22  QEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFSLIHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150
           +  MD   +RRG+ TVH ++++  AI++G+GLL  A+E ++  PK  L D       L  
Sbjct: 82  I--MDKAPLRRGQLTVHEKWNDSVAILSGDGLLVKAYEQVAKCPKENLLD-------LLT 132

Query: 151 THNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T N     +  GQ LD+  E +D   E +   + ++KT  L+  A   GAI+A AS  ++
Sbjct: 133 TFNKVATEVCEGQQLDMDFESLDQVTEDEYLHMIRLKTSVLLGGALRMGAIIAQASLEQQ 192

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E +  FG N+GI FQL DD+LD   D
Sbjct: 193 EFIYDFGVNVGIAFQLQDDILDVYGD 218


>gi|120610694|ref|YP_970372.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1]
 gi|120589158|gb|ABM32598.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1]
          Length = 306

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 109/184 (59%), Gaps = 4/184 (2%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+LG GK++R  LV   A   + +   ALR   ++E IH YSL+HDD+P MDN  +
Sbjct: 47  AMRYAVLGAGKRLRPLLVLAAAEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDVL 106

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+Q+ +  A++AG+ L   AFE++ +P+  + + ++++L   L    G  GM 
Sbjct: 107 RRGKPTVHVQFGQAQALLAGDALQALAFELL-TPEDDVPEAMQARLCRLLARAAGADGMA 165

Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ +D+    +   E ++  + ++KTGAL+  +   GA     +    + L  +G  LG
Sbjct: 166 GGQAIDLASVGVALSEDELRRMHRLKTGALLQSSVLMGAACGAVAPAAWDALSRYGAALG 225

Query: 219 IIFQ 222
           + FQ
Sbjct: 226 LAFQ 229


>gi|291619711|ref|YP_003522453.1| CrtE [Pantoea ananatis LMG 20103]
 gi|291154741|gb|ADD79325.1| CrtE [Pantoea ananatis LMG 20103]
          Length = 311

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A      V+H   L +  A+E +H  SLI DD+P MD+  +RRG
Sbjct: 57  ALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRG 116

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT+H  Y E  AI+A   LL+ AF +I+     L    +++ +  L++ IG+QG++ GQ
Sbjct: 117 RPTIHSHYGEHVAILAAVALLSKAFGVIADADG-LTPLAKNRAVSELSNAIGMQGLVQGQ 175

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             D+   D+      + M    KT  L C + +  +I+A+AS   ++ L  F  +LG  F
Sbjct: 176 FKDLSEGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAF 235

Query: 222 QLADDLLDCEEDLPK 236
           QL DDL D   D  K
Sbjct: 236 QLLDDLTDGMTDTGK 250


>gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
 gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
 gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84]
 gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7]
 gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407]
 gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
 gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
 gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84]
 gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407]
 gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7]
 gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1]
 gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
          Length = 289

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCY 85
           A   Q Q  +RL  ++ Y+L  GGK+IR  L+      F +    A  +V A +E IH  
Sbjct: 14  ADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAACVELIHTG 73

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN   RRG+ T H  YDE TAI+AG+ L    F  ++  +  L       
Sbjct: 74  SLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLA--QVDLPAETILA 131

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+  L+   G  GM+ GQ+LD+  E  + T  Q+  I   KTG L+ F   +  ++A  S
Sbjct: 132 LVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFPFVAAGLIAGQS 191

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
                 LR  G+ +G+ FQ+ DD+LD 
Sbjct: 192 DVVINHLRQAGQLIGLAFQVRDDILDV 218


>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
 gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
          Length = 296

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 116/204 (56%), Gaps = 7/204 (3%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +  +  + L  A+RY+LL GGK++R  L      L       AL    A+E IH  SLIH
Sbjct: 26  LGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGEATQALPTAVALEMIHTMSLIH 85

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLM 147
           DDLP+MD+  +RRG+PT H  Y E  AI+AG+ LLT AFE+++  SP    +  ++    
Sbjct: 86  DDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPAERLLKVVGE 145

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           LSL    G  G++GGQ++D++ E   +D   +  I   KTGAL+     +GA++  A + 
Sbjct: 146 LSLVA--GAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADEA 203

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
             + LR +   +G+ FQ+ DD+LD
Sbjct: 204 LIKALRTYARGIGLAFQIIDDILD 227


>gi|319953302|ref|YP_004164569.1| geranyltranstransferase [Cellulophaga algicola DSM 14237]
 gi|319421962|gb|ADV49071.1| Geranyltranstransferase [Cellulophaga algicola DSM 14237]
          Length = 324

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 116/229 (50%), Gaps = 17/229 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           +RI+   ++ +       + +    L   I Y L LGGK++R  L    A +F  ++  A
Sbjct: 2   QRIEDYREEFIAYLEEKSKLKEPINLYEPITYILSLGGKRLRPILTLMTADIFGADYKKA 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E  H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+    
Sbjct: 62  LDAALAVEVFHNFSLVHDDI--MDDAPLRRGKATVHEKWDINTGILSGDAMLITAY---- 115

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLDIQDEFIDETQVFMIQKM---KTGA 187
               QL +N   ++  SL        +    GQ  D+  E  D+  +    KM   KT  
Sbjct: 116 ----QLFENYEGEVFRSLAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAV 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  A + GAI+A+AS   ++ +  FG NLGI FQL DD LD   D PK
Sbjct: 172 LVGAAMKMGAIIANASTEGQDSIYEFGRNLGIAFQLQDDYLDAFGD-PK 219


>gi|166709970|ref|ZP_02241177.1| farnesyl diphosphate synthase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 332

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 118/233 (50%), Gaps = 14/233 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q  ++R++ +L   L         + +  L++A+RYA L GGK+ R+ L     +L + 
Sbjct: 29  MQAGAQRVEQVLARRLCAG-----NEESTELMTAMRYATLQGGKRTRALLCLAAGALADT 83

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  +GAAIE +H  +L+HDDLP+MDN  +RRG PTVH+++ E TAI+ G+ L  +A
Sbjct: 84  PAHVLDDIGAAIEMMHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAHA 143

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185
           F  ++         IR  L+  L H +   G  GGQ +D+    + +    +  + +MK+
Sbjct: 144 FLTLAG--VDASGEIRIALVRELAHAVSADGAAGGQAMDMALVGQSVGLDTIMAMHRMKS 201

Query: 186 GALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEEDL 234
           GAL+  +   G + A         L      +    G+  Q+ DD+LD   D+
Sbjct: 202 GALVRASVRMGTLCALPEGGVHAELAAALDRYSACFGLALQVVDDILDATADV 254


>gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091]
 gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091]
          Length = 327

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 118/231 (51%), Gaps = 18/231 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L+  ++ ID ++DD L +       + ++ L+ A      GGKK R  L           
Sbjct: 7   LKAYAEEIDVVIDDSLSKLEPESLYESSEYLIKA------GGKKFRPALTLLSCQAVGGK 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL+  AAIE  H +SLIHDD+  MDN   RRGKP VH  + E  AI+AG+ L   +F
Sbjct: 61  PEKALKAAAAIELTHTFSLIHDDI--MDNDDTRRGKPAVHKVWGEPLAILAGDSLFAKSF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQ--GMLGGQMLDI--QDEF--IDETQVFMIQK 182
           E++S      +DNI  + ++     +      +  GQ LD+  +D F    +  + MI K
Sbjct: 119 ELLSQ---SAEDNIAYERVVDALQVLTNSCINICEGQALDMAFEDTFNVTKDEYMNMIYK 175

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KTG L+  +   GAIM  AS NE + LR +G+ +G+ FQ+ DD +D   D
Sbjct: 176 -KTGDLITASTTIGAIMGGASSNEIQALRTYGKQIGLAFQIQDDYIDLTGD 225


>gi|312864464|ref|ZP_07724695.1| geranyltranstransferase [Streptococcus downei F0415]
 gi|311099591|gb|EFQ57804.1| geranyltranstransferase [Streptococcus downei F0415]
          Length = 288

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 123/221 (55%), Gaps = 12/221 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           ++ID  L +       + Q+Q + RL+ AI Y++  GGK+IR  L+ E    F +    A
Sbjct: 5   EKIDAALKEF------YEQSQVSPRLMEAILYSVHAGGKRIRPLLLLETLEGFGIELTKA 58

Query: 73  -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V AA+E IH  SLIHDDLP+MD+   RRG+ T H Q+DE TAI+AG+ L    + +I
Sbjct: 59  HYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKQFDEATAILAGDSLFLDPYGLI 118

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALM 189
           +  +T L  +I   L+  L+   G  GM+ GQMLDI+ E    T  QV+ I   KTG L+
Sbjct: 119 A--QTDLHPSIALALIADLSQASGSFGMVAGQMLDIEGEEQTLTLDQVYTIHSHKTGKLL 176

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            F  ++  ++A        +L   G  +G  FQ+ DD+LD 
Sbjct: 177 AFPFKAAGLLAQQDSAILAQLEEVGLLVGTAFQVRDDILDV 217


>gi|93007052|ref|YP_581489.1| polyprenyl synthetase [Psychrobacter cryohalolentis K5]
 gi|92394730|gb|ABE76005.1| farnesyl-diphosphate synthase [Psychrobacter cryohalolentis K5]
          Length = 360

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 118/221 (53%), Gaps = 35/221 (15%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNV------------NHLTAL-----------R 74
           LL A RY + G GK +R  LV   AS F+             N L +L           R
Sbjct: 73  LLDACRYVMTGTGKLVRPLLV---ASAFSSTYSHNDTIADKDNALASLLENDSDYDMCRR 129

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS- 133
              A+E +H YSL+HDDLP MD+  +RRG+PT HI ++E TA++AG+ L T AFE++++ 
Sbjct: 130 AALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFEESTALLAGDVLQTLAFEVLTAD 189

Query: 134 -PKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188
            P     D+ I SQL          + M+ GQMLD+  E    I +  +  I + KTGAL
Sbjct: 190 LPTFAPFDSAIASQLFAIFAPRA--RRMVSGQMLDLNAEATTGISQNDLEAIHRDKTGAL 247

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  A   G I A A+  ++  L+   +++G+ FQ+ DD+LD
Sbjct: 248 IEAAMLMGGICAGATAPQRMALQECAQHIGLAFQVQDDILD 288


>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
 gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
          Length = 307

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 120/207 (57%), Gaps = 9/207 (4%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L  ++ Y+L+ GGK++R  LV         +   A+ V  A+E +H YSLIHDDLP+M
Sbjct: 40  ETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPAM 99

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154
           D+   RRGKPT H  + E +AI+AG+ LLT+AF   S  +   K  + ++ +LS+  ++ 
Sbjct: 100 DDDDYRRGKPTNHKVFGEASAILAGDALLTHAF--YSVIQAARKHGVPAERVLSIVEDLA 157

Query: 155 ---GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM+GGQ+ D++ E       Q+  I   KT  L+ F+  +G  +A  S ++ E 
Sbjct: 158 VYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDSQIES 217

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           LR FG ++G+ FQ+ DD+LD   D  K
Sbjct: 218 LRTFGHHIGLAFQIQDDILDLVGDESK 244


>gi|148394|gb|AAA21260.1| CrtE [Pantoea agglomerans]
          Length = 302

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 104/197 (52%), Gaps = 9/197 (4%)

Query: 46  ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A      V+H   L +  A+E +H  SLI DD+P MD+  I  G
Sbjct: 48  ALAPGKRIRPMLLLLTARDLGCAVSHEGLLDIACAVEMVHAASLILDDMPCMDDAQIVGG 107

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLG 161
           +PTVH QY E  AI+A   LL+ AF +I+     T L  N   + +  L++ IG+QG++ 
Sbjct: 108 RPTVHCQYGEHVAILAAVALLSKAFGVIADADGLTALAKN---RAVSELSNAIGMQGLVQ 164

Query: 162 GQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           GQ  D+   D+      + M    KT  L C + +  +I+A+AS   ++ L  F  +LG 
Sbjct: 165 GQFKDLSEGDKRRSAEAILMTNHFKTSTLFCASMQMASIVANASSERRDYLHRFSLDLGQ 224

Query: 220 IFQLADDLLDCEEDLPK 236
            FQL DDL D   D  K
Sbjct: 225 AFQLLDDLTDGMADTGK 241


>gi|62959169|gb|AAY23692.1| farnesyl diphosphate synthase [Erythrobacter litoralis]
          Length = 145

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQLVDLESEGKTDASVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|306833003|ref|ZP_07466135.1| geranyltranstransferase [Streptococcus bovis ATCC 700338]
 gi|304424902|gb|EFM28036.1| geranyltranstransferase [Streptococcus bovis ATCC 700338]
          Length = 289

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 119/197 (60%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95
           L+ AI Y++  GGK+IR  +  E    F +  LT     V AA+E IH  SLIHDDLP+M
Sbjct: 25  LIEAILYSVEAGGKRIRPLIFLEILEGFGI-ELTEGHFDVAAALEMIHTGSLIHDDLPAM 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRG+ T H ++DE TAI+AG+ L    F +++   T L  +I+ +L+  L+   G
Sbjct: 84  DDDDYRRGRLTSHKKFDEATAILAGDSLFLDPFGLVAD--TALSADIKVRLIAELSQASG 141

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+GGQMLD++ E   ++ +++ +I   KTG L+ F   +  I+A+ + N+ + LR  
Sbjct: 142 TYGMVGGQMLDMKGEERKLNLSELQLIHTNKTGKLLTFPVVAAGIVANLAANDLKSLREA 201

Query: 214 GENLGIIFQLADDLLDC 230
           G  +G+ FQ+ DD+LD 
Sbjct: 202 GSLVGLAFQVRDDILDV 218


>gi|289547882|ref|YP_003472870.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
 gi|289181499|gb|ADC88743.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
          Length = 264

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 9/188 (4%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y L GGK+IR  L+         N   A+ VG AIE IH YSLIHDDLP++DN   RRG 
Sbjct: 34  YPLQGGKRIRPLLLCGVCDALGGNVEDAVVVGCAIELIHNYSLIHDDLPALDNDPQRRGL 93

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML---SLTHNIGLQGMLG 161
           P+ HI + E  A++AG+ LLT AF+++S   +Q      S L+L    ++   G +GM+G
Sbjct: 94  PSCHIAFGEDIALLAGDALLTLAFQVLSD-VSQFNQVEPSDLLLIIHEISRRAGSEGMVG 152

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           GQ++DI+   I + +   ++K       CF   S  I+A      K+ L   G   G++F
Sbjct: 153 GQVMDIRG--IGDRREINLKKTAQLFAACFV--SAGIIAKKKSMLKD-LEKVGIRTGLLF 207

Query: 222 QLADDLLD 229
           Q+ DD  D
Sbjct: 208 QMCDDWKD 215


>gi|62959211|gb|AAY23713.1| farnesyl diphosphate synthase [Synechococcus cf. elongatus
           CCMP1379]
          Length = 145

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDMPWMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDVPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|254497873|ref|ZP_05110638.1| geranyltranstransferase [Legionella drancourtii LLAP12]
 gi|254352871|gb|EET11641.1| geranyltranstransferase [Legionella drancourtii LLAP12]
          Length = 294

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 126/226 (55%), Gaps = 19/226 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KR + +L+ ++ +++   Q  H      A+ Y+L  GGK+IR  LV     L +V+    
Sbjct: 7   KRHEHVLEQIINESSVPAQQIH-----LAMNYSLFPGGKRIRPILVYLTGHLIDVDPQVL 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             + AA+E  HCYSLIHDDLP+MD+  +RRGKP+ H  +DE TAI+ G+G+   A E++ 
Sbjct: 62  DVIAAAVELTHCYSLIHDDLPAMDDDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVL- 120

Query: 133 SPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQD---EFIDETQVFMIQKMKT 185
              T L   +    ++++T  +    G+ GM+ GQ LD+ +     I E Q+  I  +KT
Sbjct: 121 --LTHLSPLVHPVQVIAITQELVKASGISGMVSGQSLDLSELAKSSITEEQLREIHHLKT 178

Query: 186 GALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLD 229
           G L+  AC    + A    S+  K  LR +  ++G++FQ+ DD LD
Sbjct: 179 GRLIS-ACIEMVLAAKDTVSEQTKAALRTYASHIGLVFQMQDDYLD 223


>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
 gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
          Length = 321

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 124/230 (53%), Gaps = 14/230 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
            P+ L+    R++  LD       + +  +  + L  A+RY+LL GGK++R  L      
Sbjct: 30  FPAYLEAARLRVEAALD-------AALGPERPESLREAMRYSLLAGGKRLRPILCLAACE 82

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       A+    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+ L
Sbjct: 83  LAGGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGDAL 142

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT AFE+++   + +       ++  L+   G  G++GGQ++D++ E   +D   +  I 
Sbjct: 143 LTRAFEMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEYIH 202

Query: 182 KMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             KTGAL+  C  C  GA++A A       LR +   +G+ FQ+ DD+LD
Sbjct: 203 LHKTGALLRACVLC--GALIAGAPDALLTALRTYARGIGLAFQIIDDILD 250


>gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1]
          Length = 326

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 123/248 (49%), Gaps = 40/248 (16%)

Query: 24  LLQTASHM------QTQHNDRLL--------------SAIRYALL-GGKKIRSFLVTECA 62
            +Q A H+      QT+H  +LL              +A RYA+  GGK +R  L     
Sbjct: 17  FIQNAKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKHVRPLLALSTF 76

Query: 63  SLF--------NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
            +         + N+LT       R   A+E IH YSLIHDDLP MD+  +RRG+PT HI
Sbjct: 77  LMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTCHI 136

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            Y E  A++AG+ L + AFE++     K    D I  +L   L+     + M+ GQMLDI
Sbjct: 137 VYGEDIALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLS--CRARRMVSGQMLDI 194

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + E   + + ++  I + KTGAL+  A   GAI A    +    L+ +   +G+ FQ+ D
Sbjct: 195 KGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQD 254

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 255 DVLDITAD 262


>gi|317495197|ref|ZP_07953567.1| polyprenyl synthetase [Gemella moribillum M424]
 gi|316914619|gb|EFV36095.1| polyprenyl synthetase [Gemella moribillum M424]
          Length = 286

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 14/210 (6%)

Query: 32  QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +T   + L  +I Y+L+  GKKIR          +  +      V  AIE +H YSL+HD
Sbjct: 25  KTDMPELLKKSISYSLVNDGKKIRPLSFLYLLKYYGEDFAEYFDVALAIELVHTYSLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP MDN   R GK T H  + +  A++ G+ +LT AFE++S+  + +K +++ +L+   
Sbjct: 85  DLPEMDNDDYRWGKLTNHKVFGQDVAVLTGDAMLTLAFEVLSN--SNIKPDLKVKLISQF 142

Query: 151 THNIGLQGMLGGQMLDI-QDEF-IDETQVFMIQKMKTGAL----MCFACESGAIMAHASQ 204
            +  G  GM+ GQ+ DI Q E+ ++   +  +  +KTG L    + FAC+    +   S 
Sbjct: 143 ANYSGAMGMIAGQIYDIKQKEYEVNADYLRRMHSLKTGKLIELPLDFACQIAGKVEELSD 202

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                +  FG+ LGI +Q+ DD+LD   D 
Sbjct: 203 -----INSFGKELGIAYQIKDDILDYYGDF 227


>gi|62959177|gb|AAY23696.1| farnesyl diphosphate synthase [Bacillus sp. JL-34]
 gi|62959197|gb|AAY23706.1| farnesyl diphosphate synthase [Bacillus sp. JL-29]
 gi|73811209|gb|AAY23723.1| farnesyl diphosphate synthase [Citromicrobium bathyomarinum JL354]
          Length = 145

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|310779233|ref|YP_003967566.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748556|gb|ADO83218.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926]
          Length = 294

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 3/198 (1%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
            ++YA+L GGK++R  L+     L        +    AIE IH YSL+HDDLP++D+   
Sbjct: 33  GMKYAVLNGGKRLRPILLLMTLKLLGEREEKGIPAAVAIEMIHSYSLVHDDLPALDDDDY 92

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGK T H +Y E   I+ G+ LLT+AF +++S   ++       ++   +   G+ GM+
Sbjct: 93  RRGKLTTHKKYGEAQGILIGDALLTHAFNVLTSKDQEIDAQKIVDIVRLTSQYAGVNGMI 152

Query: 161 GGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQM+DI+ E   ID   +  I   KTG ++    E   I+A     +KE+L  + E +G
Sbjct: 153 GGQMVDIESEGKSIDLPVLQYIHTHKTGKMISLPVEVACIIAGIEGEKKEKLIEYSELIG 212

Query: 219 IIFQLADDLLDCEEDLPK 236
           + FQ+ DD+LD E D  K
Sbjct: 213 LAFQIKDDILDIEGDFEK 230


>gi|304382638|ref|ZP_07365132.1| geranyltranstransferase [Prevotella marshii DSM 16973]
 gi|304336263|gb|EFM02505.1| geranyltranstransferase [Prevotella marshii DSM 16973]
          Length = 324

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 23/218 (10%)

Query: 30  HMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           +++ Q+ DR    L   I+Y L +GGK+IR  L+    +L+  +  + L    AIE  H 
Sbjct: 14  YLEGQNYDRSPKSLYEPIKYVLSMGGKRIRPTLMLLAYNLYKDDPESILSTACAIETYHN 73

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIR 143
           Y+L+HDDL  MD+  +RRG+ TVH ++   TAI++G+ +L  A+E ++  +  +LKD   
Sbjct: 74  YTLLHDDL--MDHADVRRGRATVHKRWGANTAILSGDSMLVLAYERLARCRADKLKD--- 128

Query: 144 SQLMLSLTHNIGLQGMLG-GQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              +L L     L+  +G GQ  D+    +D+  +E  + MI ++KT  L+  A + GAI
Sbjct: 129 ---ILDLFTETALE--IGEGQEFDMSFEQRDDVKEEEYIEMI-RLKTSVLLACAMKMGAI 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +A A   + E L  FGE +G+ FQL DD LD   D PK
Sbjct: 183 LADAPPADAENLYKFGEQIGLAFQLQDDFLDVYGD-PK 219


>gi|288801181|ref|ZP_06406636.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331792|gb|EFC70275.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 325

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 16/201 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y+L +GGK+IR  L+     L+  +  + L V +A+E  H Y+L+HDDL  MDN
Sbjct: 27  LYEPIKYSLSMGGKRIRPMLMLLTYQLYKNDPQSILPVASALETYHNYTLLHDDL--MDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTH-NIG 155
             +RRG+PTVH +++  TAI++G+ +L +A+++++       D ++  L + ++T   IG
Sbjct: 85  ALLRRGQPTVHKKWNANTAILSGDSMLVFAYKLLAECNV---DKLKEVLDLFTITALEIG 141

Query: 156 LQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
                 GQ  D+  E    + E++   + ++KT  L+  + + GAI+A A   +   L  
Sbjct: 142 -----EGQQYDMDFELRNDVAESEYIEMIRLKTSVLLACSMKIGAILAGAPSEDANNLYR 196

Query: 213 FGENLGIIFQLADDLLDCEED 233
           FGE +G+ FQL DD LD   D
Sbjct: 197 FGELIGLAFQLQDDYLDVYGD 217


>gi|256820671|ref|YP_003141950.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582254|gb|ACU93389.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 321

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 12/196 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L LGGK+IR  L      +F  ++  AL    AIE  H +SLIHDD+  MDN
Sbjct: 27  LYEPIQYILNLGGKRIRPLLTLIATDIFGKDYCKALNAATAIEVFHNFSLIHDDI--MDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH ++D    I++G+ +L  A++++    ++    I  +L+ +L+    L+
Sbjct: 85  ASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDYPSE----IFQELVKTLSET-ALK 139

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ +D+  E + E  +    +M   KT  L+  A + G+I++  ++  +  +  FG
Sbjct: 140 -VCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGAALQMGSIISETTKENQMNMYNFG 198

Query: 215 ENLGIIFQLADDLLDC 230
            NLGI FQL DD LD 
Sbjct: 199 LNLGIAFQLQDDYLDT 214


>gi|322385057|ref|ZP_08058707.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100]
 gi|321270967|gb|EFX53877.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100]
          Length = 291

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDDLP+MDN   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELLEGFGLELTPAHFQVAAALEMIHTGSLIHDDLPAMDNDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++    +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLVA--MVELPSQVKVDLIAELSLAAGSFGMVAGQVLDM 155

Query: 168 QDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E    T  Q+  I   KTG L+ +   +  I+A  SQ+   +LR  GE LG+ FQ+ D
Sbjct: 156 QGEGRKLTMDQLQTIHANKTGKLLAYPFVAAGIIAQTSQSVLGKLRQAGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|260590834|ref|ZP_05856292.1| polyprenyl synthetase [Prevotella veroralis F0319]
 gi|260537185|gb|EEX19802.1| polyprenyl synthetase [Prevotella veroralis F0319]
          Length = 324

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 123/222 (55%), Gaps = 13/222 (5%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D++L +   ++     +R    L   I+Y L LGGK+IR  L+    +LF  +  + L  
Sbjct: 5   DEILYKVNDYINNISYNRKPWSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKEDPESILSP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MD+  +RRG+ TVH+++D  TAI++G+ +L  AF+ ++   
Sbjct: 65  ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFDRMAKCS 122

Query: 136 TQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            +    +R  L L  T  + + +G       + +++  +E  + MI ++KT  L+  A +
Sbjct: 123 DKY---LREVLKLFTTTALEIGEGQQYDMEFETRNDVKEEEYIEMI-RLKTSVLLACAMK 178

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            GA++A A + + E L  FGE +G+ FQL DD LD   D PK
Sbjct: 179 IGALLADAPEEDAESLYKFGEQVGLAFQLQDDYLDVYGD-PK 219


>gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 157

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 7/158 (4%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H  SLI DDLP MDN  +RRGKPT H  + E  AI++G  LL  AFE ++     
Sbjct: 1   AVEMMHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVS 60

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFA 192
            K  +R+  +  L  +IG +G++ GQ  D+  E +++  V +     I   KTG+L+  +
Sbjct: 61  SKKMVRA--VKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEAS 118

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              GA++   ++ E E++R F   +G++FQ+ DD+LD 
Sbjct: 119 AVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDV 156


>gi|62959173|gb|AAY23694.1| farnesyl diphosphate synthase [Roseobacter denitrificans OCh 114]
          Length = 145

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRGKP  H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDLPAMDNDDLRRGKPANHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|289449928|ref|YP_003475509.1| geranyltranstransferase family protein [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289184475|gb|ADC90900.1| geranyltranstransferase family protein [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 336

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 25/206 (12%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLT--------ALR-VGAAIECIHCYSLIHDD 91
           AI YA+L GGK++R  L      + +   L         AL+ +  A+E IH YSLIHDD
Sbjct: 74  AITYAMLAGGKRLRPTLAVLVYEMLSRQTLPTKSETWPDALKYLIRAVESIHIYSLIHDD 133

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MDN  +R G+PT+H  + E  AI+ G+ LL+ A++  +       DN+ + ++L+  
Sbjct: 134 LPAMDNDSLRHGRPTLHTFFSEGQAILVGDALLSEAWQYATK-----TDNVEAGMILAQ- 187

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM----IQKMKTGALMCFACESGAIMAHASQNEK 207
                  M+ GQ  D+   F D+   +     + K KT AL+     + A +  A    K
Sbjct: 188 ---NALAMVHGQWRDLA--FTDQKVTYQDLCEMVKRKTAALIAAPVLAAATLTEADAPTK 242

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
            +L  F ENLGI FQ+ DD+LD E +
Sbjct: 243 RQLSQFAENLGIAFQIRDDILDVEAE 268


>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 7/218 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS--LFNVNHLTALRV 75
           T++ ++  +    +  Q+ + +  A+RY++L  +  R+  V   A+  LF  N L A   
Sbjct: 20  TLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGGNRLAAFPT 79

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSP 134
             A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG+ L    F  I+S+ 
Sbjct: 80  ACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLGFRHIVSNT 139

Query: 135 KTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            + L    R  +++  +   +G  GM  GQ LD++           +Q+ K G +   + 
Sbjct: 140 PSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGSL---NSAEFVQEKKYGEMGECSA 196

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             G ++A A  +E +RLR +G  +G+++++ DD+L+ +
Sbjct: 197 VCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLEAK 234


>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
 gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
          Length = 296

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 123/226 (54%), Gaps = 14/226 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L +  + ++  LDD        +  +  + L  A+RY+LL GGK++R  L      L   
Sbjct: 11  LGKAKETVEAALDD-------SLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGG 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+ LLT A
Sbjct: 64  DAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRA 123

Query: 128 FEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
           FE+++  SP       ++    LSL    G  G++GGQ++D++ E   +D   +  I   
Sbjct: 124 FEMVALRSPGVPADQLLKVVGELSLV--AGAPGLVGGQVVDLESEGKQVDLETLEYIHLH 181

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTGAL+     +GA++ +A       LR +   +G+ FQ+ DD+LD
Sbjct: 182 KTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILD 227


>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
 gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
          Length = 304

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 9/207 (4%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L  ++ Y+L+ GGK++R  LV         +   A+ V  A+E +H YSLIHDDLP+M
Sbjct: 37  ETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPAM 96

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154
           D+   RRGKPT H  + E +AI+AG+ LLT+AF   S  +   K  + ++ +LS+  ++ 
Sbjct: 97  DDDDYRRGKPTNHKVFGEASAILAGDALLTHAF--YSVIQAARKHGVPAERVLSIVEDLA 154

Query: 155 ---GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM+GGQ+ D++ E       Q+  I   KT  L+ F+  +G  +A  S  + E 
Sbjct: 155 EYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDAQIES 214

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           LR FG ++G+ FQ+ DD+LD   D  K
Sbjct: 215 LRTFGHHIGLAFQIQDDILDLVGDESK 241


>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
 gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
           Japonica Group]
 gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
           Japonica Group]
 gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
          Length = 376

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 9/222 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           S R D + D L       M     +RL  ++RY++L GGK++R  L      L   +   
Sbjct: 89  SARADAVHDAL----DRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAA 144

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  V  A+E IH  SLIHDD+P MD+  +RRG+P+ H+ + E TA++AG+ L   AFE +
Sbjct: 145 ATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHV 204

Query: 132 SS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGA 187
           +       +  +   + +  L    G  G+  GQ+ D + E +  +   +  I   KT  
Sbjct: 205 ARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTAR 264

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  A  SGAI+   +  E ER+R +   +G++FQ+ DD+LD
Sbjct: 265 LLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLD 306


>gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
          Length = 363

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 4/196 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A+RY+LL GGK++R  L      L   N   A+    A+E IH  SLIHDDLP MD
Sbjct: 98  KIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMD 157

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKPT H  Y E  A++AG+ LL +AFE +++  T +  +     +  L  ++G 
Sbjct: 158 DDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATTGVPPSRILVAVAELAKSVGT 217

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ+ D+    +  +    +  I   KT AL+  +   GAI+   +  E ++LR F
Sbjct: 218 EGLVAGQVADLACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRF 277

Query: 214 GENLGIIFQLADDLLD 229
            + +G++FQ+ DD+LD
Sbjct: 278 AQCIGLLFQVVDDILD 293


>gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
 gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
          Length = 297

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 34  QHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q  + L SA+ Y A  GGK++R  L    A     +        AA+E IH YSL+HDDL
Sbjct: 27  QAPEALHSAMHYSATGGGKRVRPLLCYATAEALGQSAEQVDGAAAALELIHAYSLVHDDL 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLT 151
           P+MD+  +RRG+ T HI +DE TAI+AG+ L T AF+I++S +    D  R  + +  L 
Sbjct: 87  PAMDDDDLRRGQATCHIAFDEATAILAGDALQTLAFDILASDQALTDDPARRLRAVKVLA 146

Query: 152 HNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQN--EK 207
              G+ GM+GGQ +DI  E    T  Q+  +  +KTGAL+  + +  A +A  ++N    
Sbjct: 147 SASGVDGMVGGQAIDIAAEGQQLTLDQLKRMHALKTGALIRASVQISAALAGEAENGDTY 206

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           +RL  + E +G+ FQ+ DD+LD   D
Sbjct: 207 QRLSRYAECIGLAFQIRDDILDVISD 232


>gi|163745285|ref|ZP_02152645.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45]
 gi|161382103|gb|EDQ06512.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45]
          Length = 294

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 9/205 (4%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + H   +  A+RYA  GGK +R FLV E A L  +    A     AIE +H YSL+HDDL
Sbjct: 30  SAHKGPVAEAMRYACTGGKGLRGFLVIESARLHGIAPGMAAPAAGAIEALHAYSLVHDDL 89

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MD+  +RRG+PTVH ++DE TA++AG+ L T  FE+I           R  LM SL  
Sbjct: 90  PCMDDDDLRRGQPTVHRKWDEATAVLAGDALQTLTFELIG--HLPCSAEARLSLMTSLAG 147

Query: 153 NIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             G+ GM+GGQ LDI  E         ++  +Q  KTGAL+ ++  +G  MA A   +  
Sbjct: 148 AAGVGGMVGGQALDIAAETAPAPLSLAEITALQAGKTGALIEWSAMAGPRMAGA---DAT 204

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  + ++LG+ FQ+ADD+LD E D
Sbjct: 205 ALGQYAKHLGLAFQIADDILDVEGD 229


>gi|124027425|ref|YP_001012745.1| geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM
           5456]
 gi|123978119|gb|ABM80400.1| Geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM
           5456]
          Length = 336

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 118/242 (48%), Gaps = 12/242 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G LP  +    KR+ +++D  +         +  D  L  IR    GGK++R  +V  
Sbjct: 1   MTGQLPESVVAYLKRVASLVDGYIYAKVKGEPKEVYDAGLHLIR---AGGKRLRPAIVVA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A         AL   AA+E +H ++LIHDD+  MD    RRG PTVH  + E  AI AG
Sbjct: 58  IAEALGEPAERALPFAAAVELVHNFTLIHDDI--MDRDEFRRGVPTVHKVWGEPLAITAG 115

Query: 121 NGLLTYAFEIISSP--KTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + L   AFE ++    K    D + R+  +LS    +  +G     M + +DE   +  +
Sbjct: 116 DLLFAKAFETLTDALDKGIPPDRVARATRVLSRASAVIAEGQAMDLMFEEEDEVSIDEYL 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
            MI K KTGAL   +   G ++A       E+L  FG+NLGI FQ+ DD+L     EE+L
Sbjct: 176 IMIYK-KTGALFEASAVLGGLVATGDDATLEKLAEFGKNLGIAFQIRDDILGIVGKEEEL 234

Query: 235 PK 236
            K
Sbjct: 235 GK 236


>gi|117508|sp|P22873|CRTE_ESCVU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; AltName: Full=Farnesyltranstransferase
 gi|148400|gb|AAA24819.1| phytoene synthase [Pantoea agglomerans]
 gi|148408|gb|AAA64977.1| pyrophosphate synthase [Pantoea agglomerans]
          Length = 307

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 6/203 (2%)

Query: 32  QTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS--LFNVNHLTALRVGAAIECIHCYSLI 88
           +T   D +  A+R  ++  GK+IR  L+   A    +  +  T L +  A+E  H  SL+
Sbjct: 32  ETDSQDIVSLAMREGVMAPGKRIRPLLMLLAARDLRYQGSMPTLLDLACAVELTHTASLM 91

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
            DD+P MDN  +RRG+PT H ++ E  AI+A  GLL+ AF +I++    L    R+Q + 
Sbjct: 92  LDDMPCMDNAELRRGQPTTHKKFGESVAILASVGLLSKAFGLIAA-TGDLPGERRAQAVN 150

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L+  +G+QG++ GQ  D+ D  +D T   +     +KTG L     +  AI + +S + 
Sbjct: 151 ELSTAVGVQGLVLGQFRDLNDAALDRTPDAILSTNHLKTGILFSAMLQIVAIASASSPST 210

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
           +E L  F  + G  FQL DDL D
Sbjct: 211 RETLHAFALDFGQAFQLLDDLRD 233


>gi|62959221|gb|AAY23718.1| farnesyl diphosphate synthase [Synechococcus elongatus CCMP1630]
          Length = 145

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P+MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDMPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL      +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALPEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|315223793|ref|ZP_07865642.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
 gi|314946239|gb|EFS98239.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
          Length = 321

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 110/196 (56%), Gaps = 12/196 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L LGGK+IR  L     ++F  ++  AL    AIE  H +SLIHDD+  MDN
Sbjct: 27  LYEPIQYILNLGGKRIRPILTLIATNIFGKDYRKALNAATAIEVFHNFSLIHDDI--MDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH ++D    I++G+ +L  A++++    ++    I  +L+ +L+    L+
Sbjct: 85  ASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDCPSK----IFQELVKTLSET-ALK 139

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ +D+  E + E  +    +M   KT  L+  A + G+I++  ++  +  +  FG
Sbjct: 140 -VCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGAALQMGSIISETTKENQINMYNFG 198

Query: 215 ENLGIIFQLADDLLDC 230
            NLGI FQL DD LD 
Sbjct: 199 LNLGIAFQLQDDYLDT 214


>gi|298717274|ref|YP_003729916.1| geranyltranstransferase [Pantoea vagans C9-1]
 gi|298361463|gb|ADI78244.1| geranyltranstransferase [Pantoea vagans C9-1]
          Length = 303

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 5/195 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A     +   A  L +  A+E +H  SLI DD+P MD+  +RRG
Sbjct: 49  ALAPGKRIRPLLLLLAARDLGCSATPAGLLDLACAVEMVHAASLILDDMPCMDDAQLRRG 108

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT+H QY E  AI+A   LL+ AF +++  +  L    R+  +  L+H +G+QG++ GQ
Sbjct: 109 RPTIHCQYGEHVAILAAVALLSKAFGVVAMAEG-LTAAARADAVAELSHAVGMQGLVQGQ 167

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             D+   D+      + M    KT  L C + +  +I+A   +  +E+L  F  NLG  F
Sbjct: 168 FKDLSEGDKPRSADAILMTNHYKTSTLFCASMQMASIVAETPKEAREQLHRFSLNLGQAF 227

Query: 222 QLADDLLDCEEDLPK 236
           QL DDL D   D  K
Sbjct: 228 QLLDDLTDGMADTGK 242


>gi|255635048|gb|ACU17882.1| unknown [Glycine max]
          Length = 342

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 7/203 (3%)

Query: 31  MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +  Q   ++  A+RY++L  G K+    +      LF  + L A     A+E +H  SLI
Sbjct: 69  IPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRLAAFPTACALEMVHAASLI 128

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146
           HDDLP MD+   RRG+P+ H  Y    AI+AG+ L    F  I S  P   + ++   ++
Sbjct: 129 HDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLVPESHLLRV 188

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +  +  ++G  GM  GQ LD++        V  IQ+ K G +   +   G  +A A  +E
Sbjct: 189 IAEIARSVGSTGMAAGQFLDLEG---GPNAVGFIQEKKFGEMGESSAVCGGFLAGAEDDE 245

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            ERLR +G  +G+++ + DD+++
Sbjct: 246 IERLRRYGRAVGVLYAVVDDIIE 268


>gi|262368900|ref|ZP_06062229.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
 gi|262316578|gb|EEY97616.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
          Length = 303

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 7/198 (3%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L SA+ +A +LGGK++R  L    A L  N N     R   A+E IHCYSL HDDLP MD
Sbjct: 36  LKSAVHHAVMLGGKRVRPALCYATAHLNPNNNAAAVRRAAVAVELIHCYSLAHDDLPCMD 95

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG+PT H+ Y E TA++AG+ L + AFEI+ S        +   ++L     +  
Sbjct: 96  NDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDAGPVVDQGIVLKQMQILAT 155

Query: 157 QG--MLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLR 211
               M+ GQ+LD+Q E   +D+T +  I + KTGAL+  A    A+      ++   +LR
Sbjct: 156 ASSKMVCGQVLDLQAEGKRVDQTALENIHRNKTGALISAAVMMAAVTVFDGCDQAIPKLR 215

Query: 212 CFGENLGIIFQLADDLLD 229
            + + +G+ FQ+ DD+LD
Sbjct: 216 EYAQAIGLAFQVQDDILD 233


>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 345

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 31  MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +  Q  +++  A+RY+ L  G K+    +      LF  N L A     A+E +H  SLI
Sbjct: 73  IPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHTASLI 132

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQL 146
           HDDLP MD+   RRG+P+ H  Y    AI+AG+ L    +  I+S   T L    R  ++
Sbjct: 133 HDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPTGLVPEPRLLRV 192

Query: 147 MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +  +   +G  GM  GQ LD++    F++  Q     +M   + +C     G ++A A  
Sbjct: 193 IAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEKKYGEMSECSAVC-----GGLLAGAED 247

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
           +E +RLR +G  +G+++Q+ DD+L+ +
Sbjct: 248 DEIQRLRRYGRAVGVLYQVIDDVLEAK 274


>gi|281421201|ref|ZP_06252200.1| polyprenyl synthetase [Prevotella copri DSM 18205]
 gi|281404736|gb|EFB35416.1| polyprenyl synthetase [Prevotella copri DSM 18205]
          Length = 324

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 14/197 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   IRY L +GGK+IR  L+    +LF  N    L    A+E  H Y+L+HDDL  MDN
Sbjct: 27  LYEPIRYVLSMGGKRIRPTLMLLGYNLFKDNPEKILMNAVALETYHNYTLLHDDL--MDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  TVH ++D  TAI++G+ +L  A+E ++       D      +L L     L+
Sbjct: 85  ADLRRGHETVHKKWDANTAILSGDSMLVLAYERMAQC-----DEKHLAKVLKLFTTTALE 139

Query: 158 GMLG-GQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +G GQ  D++ E    + E +   + ++KT  L+  A + GAI+A AS  + E L  F
Sbjct: 140 --IGEGQQFDMEFENRNDVKEEEYIEMIRLKTSVLLACALKMGAILADASDEDAENLYKF 197

Query: 214 GENLGIIFQLADDLLDC 230
           GE +G+ FQL DD LD 
Sbjct: 198 GEQIGLAFQLQDDYLDV 214


>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
 gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
          Length = 296

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 14/219 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           ++  LDD        +  +  + L  A+RY+LL GGK++R  L      L       A+ 
Sbjct: 18  VEAALDD-------SLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGEAKHAVP 70

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-- 132
              A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+ LLT AFE+++  
Sbjct: 71  TAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALR 130

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
           SP    +  ++    LSL    G  G++GGQ++D++ E   +D   +  I   KTGAL+ 
Sbjct: 131 SPGVPAERLLKVVGELSLV--AGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTGALLS 188

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               +GA++ +A       LR +   +G+ FQ+ DD+LD
Sbjct: 189 ACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILD 227


>gi|163735452|ref|ZP_02142885.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och
           149]
 gi|161391265|gb|EDQ15601.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och
           149]
          Length = 294

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 13/200 (6%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPS 94
           RL SA+ YA   GG +IR  ++T  A     +   LT     AA+E IHC SL+HDDLP 
Sbjct: 27  RLSSALGYATAPGGARIRPTILTSVAMACGDDQPKLTDA-AAAALELIHCASLVHDDLPC 85

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            D+  +RRGKP+VH  Y E  A++AG+ L+  AFEI++       D + +Q++L L+   
Sbjct: 86  FDDADMRRGKPSVHKAYSEPLAVLAGDSLIVLAFEILARESGLAPDRV-AQMILILSQRT 144

Query: 155 GLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           G+  G+  GQ  + + E      +    + KTGAL   A + GA+   A+  + E     
Sbjct: 145 GMPGGICAGQGWESEAEI----DLSAYHQAKTGALFIAATQMGAV---AAGQDAEPWFEL 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  +G  FQ+ADDL D   D
Sbjct: 198 GARIGEAFQVADDLRDALYD 217


>gi|312795723|ref|YP_004028645.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
           pyrophosphate synthetase [Burkholderia rhizoxinica HKI
           454]
 gi|312167498|emb|CBW74501.1| Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (EC
           2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC
           2.5.1.29) [Burkholderia rhizoxinica HKI 454]
          Length = 298

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 111/196 (56%), Gaps = 6/196 (3%)

Query: 42  AIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+LGG K++R  L                    A+E IH YSL+HDDLPSMD+  +
Sbjct: 40  AMRYAVLGGGKRVRPMLCHAAGQALGAPGQRLDAAACALELIHVYSLVHDDLPSMDDDDM 99

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+QYDE T ++ G+ L + AF  ++S    L+ + ++ LM  L    G  GM 
Sbjct: 100 RRGKPTVHVQYDEATGLLVGDALQSQAFIALAS--DALEAHRQAALMRELACASGSLGMA 157

Query: 161 GGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENL 217
           GGQ +D+      +  TQ+  + +MKTGAL+  A + GA+     S + +  L  + + +
Sbjct: 158 GGQAIDLASVGTRLSRTQLETMHRMKTGALLRAAVKMGALCGDGLSADIEAGLDAYAKAV 217

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LD   D
Sbjct: 218 GLAFQVVDDILDVTAD 233


>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
          Length = 314

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 9/222 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           S R D + D L       M     +RL  ++RY++L GGK++R  L      L   +   
Sbjct: 27  SARADAVNDAL----DRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGDAAA 82

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  V  A+E IH  SLIHDD+P MD+  +RRG+P+ H+ + E TA++AG+ L   AFE +
Sbjct: 83  ATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHV 142

Query: 132 SS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGA 187
           +       +  +   + +  L    G  G+  GQ+ D + E +  +   +  I   KT  
Sbjct: 143 ARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTAR 202

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  A  SGAI+   +  E ER+R +   +G++FQ+ DD+LD
Sbjct: 203 LLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLD 244


>gi|294340091|emb|CAZ88459.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Thiomonas sp. 3As]
          Length = 326

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 12/205 (5%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+ YA  +GGK++R  LV         +     R   A+E +H YSL+HDDLP MD
Sbjct: 56  QLHEAMHYAAAMGGKRVRPLLVWAAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMD 115

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT H+++ E  A++AG+ L   A+E++ +P+  +   ++++L   L    G 
Sbjct: 116 DDVLRRGQPTTHVRFGEALALLAGDALQALAYEVL-TPEADIAPALQARLCALLARASGA 174

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA------LMCFACESGAIMAHASQNEKE 208
            GM GGQ LDI      +    +  +   KTGA      LM  AC  G   AH +Q    
Sbjct: 175 DGMAGGQTLDILATGGAVSGDDLMHMHSRKTGALLKASVLMGAAC-GGFDTAHPAQTYTA 233

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  +G+ +G+ FQ+ DD+LD   D
Sbjct: 234 -LETYGDAVGLAFQVVDDILDVTAD 257


>gi|171778673|ref|ZP_02919769.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282630|gb|EDT48054.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 289

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 116/196 (59%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L+ +I Y++  GGK+IR  +  E    F ++   A   V AA+E IH  SLIHDDLP+MD
Sbjct: 25  LIESILYSVDAGGKRIRPLIFLELLEGFGISLTDAHYDVAAALEMIHTGSLIHDDLPAMD 84

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +   RRG+ T H ++DE TAI+AG+ L    F+++++    L  +I+ +L+  L+H  G 
Sbjct: 85  DDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLLAN--AALTADIKIRLIAELSHASGT 142

Query: 157 QGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQMLD++ E   +  +++ +I   KTG L+ F   +  I+A     E   LR  G
Sbjct: 143 YGMVGGQMLDMKGEERKLSLSELQLIHSNKTGKLLTFPVVAAGIVAGVEDEELANLRKTG 202

Query: 215 ENLGIIFQLADDLLDC 230
             +G+ FQ+ DD+LD 
Sbjct: 203 SLIGLAFQVRDDILDV 218


>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
 gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
          Length = 309

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 114/201 (56%), Gaps = 7/201 (3%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +  + L  A+RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDL
Sbjct: 42  ERPESLREAMRYSLLAGGKRLRPILCLAACELAGGDAAQAMPTAVALEMIHTMSLIHDDL 101

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSL 150
           P+MD+  +RRG+PT H  Y E  AI+AG+ LLT AFE+++  SP    +  ++    LSL
Sbjct: 102 PAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAFEMVALRSPGVPPERLLKVVGELSL 161

Query: 151 THNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G  G++GGQ++D++ E   +D   +  I   KTGAL+     +GA++  A      
Sbjct: 162 VA--GAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADDELIA 219

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            LR +   +G+ FQ+ DD+LD
Sbjct: 220 ALRVYARGIGLAFQIIDDILD 240


>gi|288802129|ref|ZP_06407570.1| polyprenyl synthetase [Prevotella melaninogenica D18]
 gi|302346894|ref|YP_003815192.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
 gi|288335564|gb|EFC73998.1| polyprenyl synthetase [Prevotella melaninogenica D18]
 gi|302150740|gb|ADK97001.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
          Length = 324

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 115/203 (56%), Gaps = 15/203 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L LGGK+IR  L+    +LF  +  T L    A+E  H Y+L+HDDL  MD+
Sbjct: 27  LYEPIKYVLSLGGKRIRPTLMLLSYNLFKDDPETILSPACALETYHNYTLLHDDL--MDD 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRG+ TVH+++D  TAI++G+ +L  AFE ++   ++ L + +R   + +L   IG 
Sbjct: 85  APLRRGQQTVHVRWDANTAILSGDSMLVLAFERMAQCDSRHLSEVLRLFTVTAL--EIG- 141

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
                GQ  D++ E    + E +   + ++KT  L+  A + GAI+A A   + E L  F
Sbjct: 142 ----EGQQYDMEFENRNDVKEEEYIEMIRLKTSVLLACAMKIGAILADAPAEDVENLYKF 197

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
           GE +G+ FQL DD LD   D PK
Sbjct: 198 GEQIGLAFQLQDDYLDVYGD-PK 219


>gi|251777602|ref|ZP_04820522.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243081917|gb|EES47807.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 289

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 9/212 (4%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +N  +  +  Y++ +GGK+IR  L+    SL+  N    + + AAIE IH YSLIHD
Sbjct: 21  RNSYNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEKIMPMAAAIEMIHTYSLIHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLS 149
           DLP MD+  +RRGKPT H  + E  A++AG+ LL  A  ++     +L ++ +R+   +S
Sbjct: 81  DLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGESALRASYEIS 140

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
                G +GM+GGQ++D+  E   I + ++  + + KTG L+  +  +G I+A+    + 
Sbjct: 141 --KAAGPEGMIGGQIVDVLSEVREISKEELEYMHEKKTGELIRVSIVAGGILANVPSGDI 198

Query: 208 ERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           E L  +G+ LG+ FQ+ DD+LD    EE L K
Sbjct: 199 EALNEYGKKLGLAFQIKDDILDVIGTEETLGK 230


>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
          Length = 334

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 7/219 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
           T++ D+  +    +  ++ +++  A+RY++L  G K+    +      LF  N L A   
Sbjct: 49  TLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPT 108

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E +H  SLIHDDLP MD+   RRG P  H  +    AI+AG+ L    F+ I S  
Sbjct: 109 ACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHT 168

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           P   + ++   +++  +   +G  GM  GQ LD++        V  +Q+ K G +   + 
Sbjct: 169 PSDLVPEDRILRVITEIARAVGSTGMAAGQFLDLEG---GPNAVDFVQEKKYGEMGECSA 225

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             GA++A AS  E + +R +G  +G+++++ DD+L+ ++
Sbjct: 226 VCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKK 264


>gi|303243472|ref|ZP_07329814.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1]
 gi|302486033|gb|EFL48955.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1]
          Length = 319

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 15/203 (7%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            + ++ L +A ++ L  GGK+IR +L T    L   N    L    A+E IH Y+LIHDD
Sbjct: 20  VEKDNTLYNASKHLLFAGGKRIRPYLATLTYMLKKDNLDEILPPAVAVELIHNYTLIHDD 79

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MDN   RRG+ TVH++Y E  AI+AG+ L   AFE IS+    +KD  ++  +L   
Sbjct: 80  I--MDNDDERRGRTTVHVEYGEPIAILAGDLLYAKAFEAISN----IKDPKKAHEVLKAL 133

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFACESGAIMAHASQNE 206
               ++ +  GQ +D+  EF D  ++     F +   KTGAL+    E GAIMA  +  E
Sbjct: 134 SKACVE-VCEGQAMDM--EFEDRDKISLDDYFEMISKKTGALIIAPIEIGAIMAECTDEE 190

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
           +  L  + + +G+ FQ+ DD+LD
Sbjct: 191 RNALYEYAKRIGMTFQIQDDVLD 213


>gi|188590181|ref|YP_001921548.1| geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500462|gb|ACD53598.1| putative geranyltranstransferase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 289

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +N  +  +  Y++ +GGK+IR  L+    SL+  N    + + AAIE IH YSLIHD
Sbjct: 21  RNSYNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEKIMPIAAAIEMIHTYSLIHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS- 149
           DLP MD+  +RRGKPT H  + E  A++AG+ LL  A  ++     +L +   S L  S 
Sbjct: 81  DLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGE---SALKASY 137

Query: 150 -LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            ++   G +GM+GGQ++D+  E   I + ++  + + KTG L+  +  +G I+A+    +
Sbjct: 138 EISKAAGPEGMIGGQVVDVLSEVREISKEELEYMHEKKTGELIRVSIVAGGILANVPSGD 197

Query: 207 KERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            E L  +G+ LG+ FQ+ DD+LD    EE L K
Sbjct: 198 IEALNEYGKKLGLAFQIKDDILDVIGTEETLGK 230


>gi|156973484|ref|YP_001444391.1| geranyltranstransferase [Vibrio harveyi ATCC BAA-1116]
 gi|156525078|gb|ABU70164.1| hypothetical protein VIBHAR_01174 [Vibrio harveyi ATCC BAA-1116]
          Length = 294

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 12/211 (5%)

Query: 32  QTQHNDR-LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           Q  H ++ L+ A++Y LL GGK++R FLV     +            +AIECIH YSLIH
Sbjct: 22  QLPHQEQPLIQAMKYGLLLGGKRVRPFLVYITGQMLGCKPEDLDTPASAIECIHAYSLIH 81

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQ 145
           DDLP+MD+  +RRG+PT HI++DE TAI+ G+ L T AF I++    +P     +N R +
Sbjct: 82  DDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTILAEGALNPNA---ENQRIK 138

Query: 146 LMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           ++ +L    G  GM  GQ LD+  ++  +    +  I + KTGAL+  A + GA+ A   
Sbjct: 139 MVQALAQASGAGGMCLGQALDLGAENRRVSLADLEEIHRNKTGALINCAVKLGALAAGEK 198

Query: 204 QNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
             E    L  + + +G+ FQ+ DD+LD   D
Sbjct: 199 GLEVLPHLERYSKAIGLAFQVQDDILDIISD 229


>gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group]
 gi|255671156|dbj|BAF09598.2| Os02g0668100 [Oryza sativa Japonica Group]
          Length = 349

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  +  +R+ SA+RYA+L G       K+    L      L      
Sbjct: 55  SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 114

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL    A+E +H  SL+HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+  
Sbjct: 115 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 174

Query: 131 ISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKT 185
           + +  T   D +   ++L     L   +G  GM  GQ LD+     + E +V  +   K 
Sbjct: 175 VIA-HTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKF 233

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           G +   +   GA++  A  +E+  LR +G  +G+++QL DD+
Sbjct: 234 GEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 275


>gi|255691323|ref|ZP_05414998.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
 gi|260622965|gb|EEX45836.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
          Length = 324

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 18/202 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   + Y L LGGK+IR  L+    +L+  +  +     AAIE  H ++L+HDDL  MD 
Sbjct: 27  LYEPVEYTLSLGGKRIRPVLMLMAYNLYREDVASIYEPAAAIEVYHNHTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKD--NIRSQLMLSLTHNI 154
             +RRGKPTVH  +++ TA+++G+ +L  AF  +++ P   LK+  ++ S  ML +    
Sbjct: 85  SDMRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTACPAEHLKEVMDLFSLTMLEICE-- 142

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
                  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A A+  + E L 
Sbjct: 143 -------GQQLDMEFESRGDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLY 195

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FG  +G+ FQL DDLLD   D
Sbjct: 196 KFGMQIGVAFQLQDDLLDVYGD 217


>gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
          Length = 344

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  +  +R+ SA+RYA+L G       K+    L      L      
Sbjct: 50  SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 109

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL    A+E +H  SL+HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+  
Sbjct: 110 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 169

Query: 131 ISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKT 185
           + +  T   D +   ++L     L   +G  GM  GQ LD+     + E +V  +   K 
Sbjct: 170 VIA-HTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKF 228

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           G +   +   GA++  A  +E+  LR +G  +G+++QL DD+
Sbjct: 229 GEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 270


>gi|62959213|gb|AAY23714.1| farnesyl diphosphate synthase [Synechococcus sp. WH 5701]
          Length = 145

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +R+GKPT H  Y E  AI+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDLPGMDNDDLRQGKPTNHKVYGEDIAILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQVVDDILDVE 145


>gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 342

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  +  +R+ SA+RYA+L G       K+    L      L      
Sbjct: 48  SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL    A+E +H  SL+HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+  
Sbjct: 108 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 167

Query: 131 ISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKT 185
           + +  T   D +   ++L     L   +G  GM  GQ LD+     + E +V  +   K 
Sbjct: 168 VIA-HTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKF 226

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           G +   +   GA++  A  +E+  LR +G  +G+++QL DD+
Sbjct: 227 GEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268


>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 310

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 7/203 (3%)

Query: 31  MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +  +H   +  A+RY++L  G K+    +      LF  + L A     A+E +H  SLI
Sbjct: 55  IPVKHPAGIYEAMRYSVLAQGAKRASPVMCVAACELFGGDRLAAFPTACALEMVHAASLI 114

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146
           HDDLP MD+  +RRGKP+ H  Y    A++AG+ L    F  I S  P   +      ++
Sbjct: 115 HDDLPCMDDDPVRRGKPSNHTVYGSGIALLAGDALFPLGFHHIVSHTPPELVPRATILRV 174

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +  +   +G  GM  GQ +D++      +    +Q+ K GA+   +   G ++  A+++E
Sbjct: 175 IAEIARTVGSTGMAAGQYVDLEGGPFPPS---FVQEKKFGAMGECSAVCGGLLGGATEDE 231

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            E LR +G  +G+++Q  DD+ +
Sbjct: 232 LESLRRYGRAVGMLYQAVDDITE 254


>gi|329295597|ref|ZP_08252933.1| Polyprenyl synthetase [Plautia stali symbiont]
          Length = 259

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 5/160 (3%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +  A+E +H  SLI DD+PSMDN  +RRG+P +H +Y E  AI+A   LL+ AFE+I+
Sbjct: 34  LDLACAVEMVHAASLILDDIPSMDNARMRRGRPAIHCEYGENVAILAAVALLSRAFEVIA 93

Query: 133 -SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALM 189
            +P   L    +++ +  L+  +GLQG++ GQ  D+ D     +   + +  ++KT  L 
Sbjct: 94  LAPG--LPATHKAEAIAELSSAVGLQGLVQGQFQDLHDGAHSRSPEAITLTNELKTSVLF 151

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               +  AI A AS   ++RL  F ++LG  FQL DDL D
Sbjct: 152 RATLQMAAIAADASVQVRQRLSYFAQDLGQAFQLLDDLAD 191


>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
          Length = 214

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 3/154 (1%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL+++FE ++     + 
Sbjct: 1   EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESG 196
            +   + +  L  +IG +G++ GQ++DI  E + +     +  I   KT AL+  A   G
Sbjct: 61  PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AI+   +  E E+LR F   +G++FQ+ DD+LD 
Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDV 154


>gi|15553717|gb|AAL01998.1|AF408847_1 geranylgeranyl diphosphate synthase [Xanthobacter autotrophicus
           Py2]
          Length = 359

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 110/217 (50%), Gaps = 8/217 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR 74
           ID  L  L+   ASH    H     +A+R+ LL  GK++R  L    A   N +    L 
Sbjct: 75  IDRRLGLLVPPAASHPAVLH-----AAMRHILLSPGKRLRPLLTLAAAIQLNASEHAVLD 129

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            G A+E IH  SLI DDLP MD+  +RR +PT H+QY E  A++A  GLL+ AF + ++ 
Sbjct: 130 FGCALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFGVAAA- 188

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFMIQKMKTGALMCFAC 193
              + +  R + +  L+  +G  G+ GGQ  D++       +    + + KTG L   A 
Sbjct: 189 APGVSERARLEAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATEDVNRRKTGVLFSAAV 248

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           E    +A A + +   L+    ++G  +Q+ DD+LD 
Sbjct: 249 EIAGHVAAADETQMGHLKALAGHVGRAYQILDDILDA 285


>gi|154248054|ref|YP_001419012.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
 gi|154162139|gb|ABS69355.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
          Length = 310

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 12/219 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR 74
           ID  L  L+   ASH    H     +A+R+ LL  GK++R  L    A   N +    L 
Sbjct: 26  IDRRLGLLVPPAASHPAVLH-----AAMRHILLSPGKRLRPLLTLAAAIQLNASEHAVLD 80

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            G A+E IH  SLI DDLP MD+  +RR +PT H+QY E  A++A  GLL+ AF + ++ 
Sbjct: 81  FGCALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFGVAAA- 139

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCF 191
              + +  R + +  L+  +G  G+ GGQ  D++      +  T+   + + KTG L   
Sbjct: 140 APGVSERARLEAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATE--DVNRRKTGVLFSA 197

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A E    +A A + +   L+    ++G  +Q+ DD+LD 
Sbjct: 198 AVEIAGHVAAADETQMGHLKALAGHVGRAYQILDDILDA 236


>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
           7421]
 gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
           7421]
          Length = 295

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 10/228 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L++   +++  LD  L Q       Q+ D+L  A+RY+LL GGK++R  L      
Sbjct: 6   LDAYLRQCRSQVEAALDRYLPQ-------QYPDKLYEAMRYSLLAGGKRLRPILCLTSCR 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +   A+    A+E +H  SLIHDDLP+MD+   RRGK T H  Y E  AI+AG+ L
Sbjct: 59  MSGGSADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           L YAF++I+      +     +++  L       G++GGQ++D++ E   I    +  I 
Sbjct: 119 LAYAFQLIAEKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEYIH 178

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             KTGAL+  +  SGAI+A A     ERL  +   +G+ FQ+ DDLLD
Sbjct: 179 THKTGALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLD 226


>gi|325661672|ref|ZP_08150295.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471925|gb|EGC75140.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 296

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 126/224 (56%), Gaps = 5/224 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           + KR  T   + +L+    +Q      ++ A+ Y+L+ GGK++R  L+ E   +F     
Sbjct: 5   DEKRKKTEEIEQILKAYLPVQEGKQQVIMEAMEYSLMAGGKRLRPMLLWETFQMFGGAAK 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T     AAIE IH YSL+HDDLP+MD+   RRG+ T HI Y E   I+AG+ LL YAFE 
Sbjct: 65  TVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILAGDALLNYAFET 124

Query: 131 I-SSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186
             ++ +   ++ IR  + +  L    G+ GM+GGQ++D+    + I E  +  I ++KTG
Sbjct: 125 ACTAFEEAPEEAIRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITEDILSFIYELKTG 184

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AL+  A   GAI+A A + E   +    + +GI FQ+ DD+LD 
Sbjct: 185 ALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDV 228


>gi|153808868|ref|ZP_01961536.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185]
 gi|149128694|gb|EDM19912.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185]
          Length = 324

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 14/206 (6%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T+    L   I Y L LGGK+IR  L+    +L+  +  +     AAIE  H ++L+HDD
Sbjct: 21  TREPKGLYEPIEYILSLGGKRIRPVLMLMAYNLYREDVASIYDPAAAIEVYHNHTLLHDD 80

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150
           L  MD   +RRGKPTVH  +++ TAI++G+ +L  AF ++++ P   LK+ +    + +L
Sbjct: 81  L--MDRSDMRRGKPTVHKVWNDNTAILSGDAMLILAFRLMTAAPSEHLKEVMELFGLTTL 138

Query: 151 THNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
                   +  GQ LD++ E  D   E +   + ++KT  L+  + + GAI+A A+  + 
Sbjct: 139 E-------ICEGQQLDMEFESRDNVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDA 191

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E L  FG  +G+ FQL DDLLD   D
Sbjct: 192 ENLYNFGMQIGVAFQLQDDLLDVYGD 217


>gi|62959207|gb|AAY23711.1| farnesyl diphosphate synthase [Roseobacter sp. JL-135]
          Length = 144

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 7/136 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH ++DE TA++ G+ L T  FE++ SP+      +R+ L LSL   +G +GM
Sbjct: 12  LRRGLPTVHKKWDEGTAVLVGDALQTLGFELVLSPECHPDPAVRTDLALSLAKAVGAKGM 71

Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LDI  E  D+     ++  +Q  KTGAL+ ++ E+GA +A   Q +   L  + +
Sbjct: 72  VLGQALDIAAETADQPLTLDEIIALQNGKTGALIRWSAEAGARLA---QADAAPLTAYAD 128

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ADD+LD E
Sbjct: 129 ALGLAFQIADDILDVE 144


>gi|71278749|ref|YP_267833.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
 gi|71144489|gb|AAZ24962.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
          Length = 300

 Score =  108 bits (269), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 131/222 (59%), Gaps = 24/222 (10%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           T ++ +L+ A+RY LL GGK++R +L  +T  A   ++N + A  V  A+ECIH YSL+H
Sbjct: 26  TINDPKLIEAMRYGLLIGGKRMRPYLAYITGEAVSADLNDIDA--VAGALECIHAYSLLH 83

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-----IRS 144
           DDLP+MD+  +RRGKPT H  +DE TAI+AG+ L T AF+I+++    +  +     I+ 
Sbjct: 84  DDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTFSMNQSTAGMPIQV 143

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           +L+  L    G QGM GGQ LD+    + I   ++ ++  +KTGAL+    E+  +M   
Sbjct: 144 KLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALL----EASVLMPAM 199

Query: 203 SQNEKER-----LRCFGENLGIIFQLADDLLD---CEEDLPK 236
              +  R     L  + + +G+ +Q+ DD++D    EE+L K
Sbjct: 200 CSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGK 241


>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
          Length = 341

 Score =  108 bits (269), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 7/215 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
           T++ ++  +    +  ++  ++  A+RY++L  GGK+    +      LF  + L A   
Sbjct: 56  TLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPT 115

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG+ L    F  I S  
Sbjct: 116 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHT 175

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           P   + +    +++  +  ++G  GM  GQ LD++        V  +Q+ K G +   + 
Sbjct: 176 PSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNSVDFVQRKKFGEMAECSA 232

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             G  +  A+ ++  RLR +G  +G+++Q+ DD+L
Sbjct: 233 VCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDML 267


>gi|300726785|ref|ZP_07060215.1| polyprenyl synthetase [Prevotella bryantii B14]
 gi|299775898|gb|EFI72478.1| polyprenyl synthetase [Prevotella bryantii B14]
          Length = 324

 Score =  108 bits (269), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 15/203 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   IRY L +GGK+IR  L+    +LF  +  + L    A+E  H Y+L+HDDL  MD 
Sbjct: 27  LYEPIRYVLSIGGKRIRPTLMLLAYNLFKEDPESILMSACALETYHNYTLLHDDL--MDQ 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGK TVH +++  TAI++G+ +L  A++ + + K + +  +  +L       IG  
Sbjct: 85  ADLRRGKETVHKKWNANTAILSGDSMLVLAYQRMLNCKPEYQGKVL-KLFTETALEIG-- 141

Query: 158 GMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
               GQ  D++ E     ++E  + MI ++KT  L+  A + GAI+A AS  + + L  F
Sbjct: 142 ---EGQQYDMEFETRMDVVEEEYIEMI-RLKTSVLLACAMKIGAILADASDEDADNLYKF 197

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
           GE +G+ FQL DD LD   D PK
Sbjct: 198 GEQIGLAFQLQDDYLDVYGD-PK 219


>gi|61653256|gb|AAX48209.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium
           DelRiverFos06H03]
          Length = 304

 Score =  108 bits (269), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 13/205 (6%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIH 89
           T    RL++A+R+A+  GG +IR  L    A+    N  HLT      A+E +HC SL+H
Sbjct: 21  TGAPPRLVAAMRHAVFSGGARIRPQLCMAVATACGDNAPHLTD-AAAVALELMHCASLVH 79

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+P+ DN   RRG PTVH  + E  A++AG+GL+  A+ ++     Q  D + + LM +
Sbjct: 80  DDMPAFDNADTRRGLPTVHKAFSEPLALLAGDGLIVMAYRVLLQAGVQQPDRLVA-LMDN 138

Query: 150 LTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           LT  +GL  G++ GQ  + +        +   Q+ KTGAL   A  +GA+   +     E
Sbjct: 139 LTAGVGLPHGIVAGQAWECE----TSADLGQYQRAKTGALFVSATCAGAL---SCGVAPE 191

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
                G+ LG  +Q+ADD+ D   D
Sbjct: 192 PWAFLGQYLGEAYQVADDIRDVIAD 216


>gi|212693605|ref|ZP_03301733.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855]
 gi|237708764|ref|ZP_04539245.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724205|ref|ZP_04554686.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265755969|ref|ZP_06090436.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212663858|gb|EEB24432.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855]
 gi|229437393|gb|EEO47470.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229457190|gb|EEO62911.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263234047|gb|EEZ19648.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 325

 Score =  108 bits (269), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 20/213 (9%)

Query: 25  LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L T  +M+      L + I Y L LGGK+IR  L+     L+  N    L   A IE  H
Sbjct: 16  LATMPYMREPKG--LYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILSQAAGIETYH 73

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKD-- 140
            Y+L+HDDL  MD   +RR KPTVH  +DE TAI++G+ +L  A+ ++++ P + LK   
Sbjct: 74  NYTLLHDDL--MDRADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCPDSYLKQVM 131

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA 197
           +I SQ  L +           GQ  D++ E    +  ++   + ++KT  L+  A + GA
Sbjct: 132 DIFSQTALEICE---------GQQWDMEFETRSDVTVSEYIEMIRLKTSVLLSAALKIGA 182

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           ++  AS+ + ++L  FG  +G+ FQL DD LD 
Sbjct: 183 VLGDASEEDAQKLYDFGIKMGLAFQLQDDFLDV 215


>gi|94311552|ref|YP_584762.1| farnesyl-diphosphate synthase [Cupriavidus metallidurans CH34]
 gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
          Length = 294

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 119/230 (51%), Gaps = 9/230 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
           + ++    R +  L+  L  T +   T H      A+RYA+LGG K++R  LV     + 
Sbjct: 6   TWMRAQGARTEAALEAALPSTDTIPYTLHE-----AMRYAVLGGGKRVRPLLVHAAGEVV 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                       A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+ L +
Sbjct: 61  GATPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQS 120

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183
            AF I+ +    L    R +++  L    G  GM GGQ +D+Q+  + +    +  + +M
Sbjct: 121 QAF-IVLAQTPALAAEARLKVVAELAVASGSIGMCGGQAIDLQNVGKAMTREALEGMHRM 179

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  +   GA+  +  Q     L  +   +G+ FQ+ DD+LD   D
Sbjct: 180 KTGALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTAD 229


>gi|62959167|gb|AAY23691.1| farnesyl diphosphate synthase [Roseobacter litoralis Och 149]
          Length = 144

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 86/137 (62%), Gaps = 11/137 (8%)

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+PTVH ++D+ TA++AG+ L T AFE+++ P       +R+ L LSL    G QGM+
Sbjct: 13  RRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASPSAEVRADLALSLARASGAQGMV 72

Query: 161 GGQMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GQ LDI  E       +DE  +  +Q+ KTGAL+ ++ ++GA +A   Q +   L+ + 
Sbjct: 73  LGQALDIAAETAHTPLSLDE--ITRLQQGKTGALIGWSAQAGARLA---QADTGALKRYA 127

Query: 215 ENLGIIFQLADDLLDCE 231
           + LG+ FQ+ADD+LD E
Sbjct: 128 QALGLAFQIADDILDVE 144


>gi|225428131|ref|XP_002281076.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|225467464|ref|XP_002264102.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 341

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 7/215 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
           T++ ++  +    +  ++  ++  A+RY++L  GGK+    +      LF  + L A   
Sbjct: 56  TLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPT 115

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG+ L    F  I S  
Sbjct: 116 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHT 175

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           P   + +    +++  +  ++G  GM  GQ LD++        V  +Q+ K G +   + 
Sbjct: 176 PSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNSVDFVQRKKFGEMAECSA 232

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             G  +  A+ ++  RLR +G  +G+++Q+ DD+L
Sbjct: 233 VCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVL 267


>gi|320161454|ref|YP_004174678.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
 gi|319995307|dbj|BAJ64078.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
          Length = 338

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 13/190 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  LV   A         AL   AA+E +H +SLIHDD+   D   +RRG+PTV +
Sbjct: 54  GKRIRPLLVLLSAQAVGGKWEQALPAAAAVELVHNFSLIHDDI--QDQSTLRRGRPTVWV 111

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLD 166
           ++    AI AG+ + T AF  ++    +L+  I SQ  L  +   H + L+ +  GQ LD
Sbjct: 112 KWGIAQAINAGDAMFTQAFWALN----RLEQTISSQTALEASRILHQVCLR-LTEGQYLD 166

Query: 167 IQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +  E +D   +     M   KT AL+    E G + +HAS  ++  LR FGENLG+ FQ+
Sbjct: 167 LAYEKVDTLPLEAYWPMVGGKTAALLGGCVELGGLCSHASPEQRTALREFGENLGLAFQV 226

Query: 224 ADDLLDCEED 233
            DD L    D
Sbjct: 227 LDDWLGIWGD 236


>gi|331084735|ref|ZP_08333823.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410829|gb|EGG90251.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 296

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 5/224 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           + KR  T   + +L+    +Q      ++ A+ Y+L+ GGK++R  L+ E   +F     
Sbjct: 5   DEKRKKTEEIEQILKAYLPVQEGKQQVIMEAMEYSLMAGGKRLRPMLLWETFQMFGSAAK 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T     AAIE IH YSL+HDDLP+MD+   RRG+ T HI Y E   I+AG+ LL YAFE 
Sbjct: 65  TVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILAGDALLNYAFET 124

Query: 131 ISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186
             +   +  +      + +  L    G+ GM+GGQ++D+    + I E  +  I ++KTG
Sbjct: 125 ACTAFEEAPEEATRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITEDILSFIYELKTG 184

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AL+  A   GAI+A A + E   +    + +GI FQ+ DD+LD 
Sbjct: 185 ALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDV 228


>gi|84043358|gb|ABC50110.1| geranylgeranyl pyrophosphate synthase [Brevundimonas vesicularis]
          Length = 298

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 109/215 (50%), Gaps = 8/215 (3%)

Query: 21  DDLLLQTASHMQ---TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
           DDL LQ  + +      H+  L +A R ALLG GK++R  L    A+    +   AL   
Sbjct: 20  DDLRLQVQARLAEVAPAHDGLLSTAAREALLGRGKRVRPVLAMLAAAHVGGDPEDALEYA 79

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E +H  SL+ DDLP MD+  +RRG+PT+H ++ E TA++A   LL  A  ++   +T
Sbjct: 80  CALEMVHAASLVLDDLPCMDDASLRRGQPTLHHRHGEDTAVLAAVALLNQATRLVL--QT 137

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                 R   +  LT  IG  G+  GQM  L       DE+ +  I  +KTGAL      
Sbjct: 138 AAPAETRLAALDLLTQAIGFDGLSEGQMRDLRDDARDRDESALRQINDLKTGALFVATVR 197

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            G ++      +  RL  FGE +G  FQL DDLLD
Sbjct: 198 GGGLLGGGDAQDLARLSIFGEAIGFAFQLCDDLLD 232


>gi|72536080|gb|AAZ73145.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
           DC413]
          Length = 302

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 17/201 (8%)

Query: 46  ALLGGKKIRSFLVTECA-SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           AL  GK+IR  L+   A  L   + L+ L     A+E +H  SLI DD+P MD+  +RRG
Sbjct: 48  ALAPGKRIRPVLLMLAAHDLGYRDELSGLLDFACAVEMVHAASLILDDIPCMDDAELRRG 107

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI----RSQLMLSLTHNIGLQGM 159
           +PT+H Q+ E  AI+A   LL+ AF +I+     L D I    ++Q +  L+H++G+QG+
Sbjct: 108 RPTIHRQFGEPVAILAAVALLSRAFGVIA-----LADGISSQAKTQAVAELSHSVGIQGL 162

Query: 160 LGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LD+    Q    D  Q  +    KT AL   A +  AI+A A    +E+L  F  
Sbjct: 163 VQGQFLDLTEGGQPRSADAIQ--LTNHFKTSALFSAAMQMAAIIAGAPLASREKLHRFAR 220

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG  FQL DDL D + D  K
Sbjct: 221 DLGQAFQLLDDLTDGQSDTGK 241


>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
          Length = 215

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL +AFE ++     +   
Sbjct: 1   IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAA 60

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAI 198
              + +  L  +IG +G++ GQ++DI  E +      Q+  I   KTGAL+  +   GAI
Sbjct: 61  KIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLGAI 120

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   +  E E+LR F   +G++FQ+  D+LD 
Sbjct: 121 LGGGTDEEVEKLRSFARCIGLLFQVVGDILDV 152


>gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 304

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 96/164 (58%), Gaps = 8/164 (4%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKT 136
           IE IH YSLIHDDLP+MDN   RRGK T H  + +  AI+AG+ LLT+AF  I  S+ + 
Sbjct: 80  IEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDAMAILAGDALLTHAFHAIVQSTRQH 139

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFA 192
            +   +  +++  L+   G  GM+GGQ  D+  E     ID  Q+  I   KT  L+ F+
Sbjct: 140 GVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQGVTSID--QLRYIHLHKTSDLIVFS 197

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +GA++  A++ + E++  FG  +G+ FQ+ DD+LD   D  K
Sbjct: 198 LRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDLVGDEAK 241


>gi|294674496|ref|YP_003575112.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola
           23]
 gi|294472118|gb|ADE81507.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola
           23]
          Length = 324

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 119/226 (52%), Gaps = 23/226 (10%)

Query: 14  KRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           K+++  LD+L+   Q AS         L   I+Y L +GGK++R  L     +L+  + L
Sbjct: 9   KKVNEALDNLVYDRQPAS---------LYDPIKYVLSIGGKRVRPVLTMLAYNLYKDDPL 59

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           + +     +E  H ++L+HDDL  MD+  +RRG  TVH ++D   AI++G+ +L  AFE 
Sbjct: 60  SIMSQALGLETYHNFTLLHDDL--MDHADMRRGHETVHKKWDANRAILSGDTMLLQAFER 117

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187
           +       K     ++ +  T  IG      GQ LD++ E    + E +   + ++KT  
Sbjct: 118 VEDCDPA-KLPAVFKVFIQTTLEIG-----EGQQLDVEFEQRNDVTEDEYIEMIRLKTSV 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  AC+ GAIMA A   + E +  FGE LG+ FQL DDLLD   D
Sbjct: 172 LLACACKVGAIMADAPAEDIENMYKFGEKLGLAFQLQDDLLDVYGD 217


>gi|303247299|ref|ZP_07333573.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491458|gb|EFL51346.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ]
          Length = 299

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LLSA+ Y+L+ GGK++R  L    A LF     + +   A  E IH YSLIHDDLP+MD+
Sbjct: 35  LLSAMEYSLMAGGKRLRPCLCLSFAELFGAPRASVMPFAAGFELIHTYSLIHDDLPAMDD 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+P+ H  + E  AI+AG+ LLT AF  +S     +   +    +       G  
Sbjct: 95  DDLRRGRPSNHKVFGEAGAILAGDALLTEAFGCMSRSWPAVAAELVLPALAEAGRAAGAA 154

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           GM+GGQMLD+  EF     V +     +Q +KTGAL+  +C  GAI+A A+++   R R 
Sbjct: 155 GMVGGQMLDM--EFTARQGVTLAELAHMQALKTGALITASCVCGAILAGAAEDGISRARE 212

Query: 213 FGENLGIIFQLADDLLD 229
           +GE +G  FQ+ DD+LD
Sbjct: 213 YGEAVGAAFQIVDDILD 229


>gi|326317942|ref|YP_004235614.1| geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374778|gb|ADX47047.1| Geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 306

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 4/184 (2%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYA+LG GK++R  LV   A   + +   ALR   ++E IH YSL+HDD+P MDN  +
Sbjct: 47  AMRYAVLGAGKRLRPLLVLAAAEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDVL 106

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPTVH+Q+ +  A++AG+ L   AFE++ +P+  + + ++++L   L    G  GM 
Sbjct: 107 RRGKPTVHVQFGQAQALLAGDALQALAFELL-TPEDDVPEAMQARLCRLLARAAGADGMA 165

Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQ +D+    I   E ++  + ++KTGAL+  +   GA    A+    + L  +G  LG
Sbjct: 166 GGQAIDLASVGIALSEDELRRMHRLKTGALLQSSVLMGAACGAAAPAAWDALSRYGAALG 225

Query: 219 IIFQ 222
           + FQ
Sbjct: 226 LAFQ 229


>gi|156932566|ref|YP_001436482.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894]
 gi|112702897|emb|CAL34117.1| geranylgeranyl pyrophosphate synthase CRTE [Cronobacter sakazakii]
 gi|156530820|gb|ABU75646.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894]
          Length = 301

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 119/227 (52%), Gaps = 12/227 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF- 65
           +LQ     + T LD+LL         Q  D + +A+R  AL  GK++R  L+   A    
Sbjct: 14  ELQALRDALQTRLDELL------PPGQERDLVCAAMREGALTPGKRVRPLLLILAARDLG 67

Query: 66  -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            + +    + +  A+E +H  SL+ DD+P MDN  +RRGKPT+H QY E  AI+A   LL
Sbjct: 68  CDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAILAAVALL 127

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           + AF +++     L D+ ++Q +  L+  +GLQG++ GQ  D+ +  +      +     
Sbjct: 128 SRAFGVVAQANP-LSDSCKTQAVSELSSAVGLQGLVQGQFRDLSEGNQARSAEAILATND 186

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KT  L     +  AI A AS + + +LR F  +LG  FQL DDL D
Sbjct: 187 LKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQLLDDLAD 233


>gi|221135092|ref|ZP_03561395.1| polyprenyl synthetase [Glaciecola sp. HTCC2999]
          Length = 294

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 8/216 (3%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           LL Q   H  T   D LL+A+ YALLG GK++R  L++    +  V+      +  AIEC
Sbjct: 17  LLSQCIRHYPTLPCD-LLAAMEYALLGQGKRMRPLLISLVGDVLGVSKEKLAPLMVAIEC 75

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSL+HDDLP MD+  +RRG PT HIQY   TAI+ G+ L + AFE ++     L  +
Sbjct: 76  IHAYSLVHDDLPDMDDDDLRRGMPTCHIQYTPGTAILVGDALQSLAFEHLAQHPV-LSAS 134

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            +  ++  L    G +GM GGQ +D+   ++ ID   +  + ++KTGAL+  AC    I 
Sbjct: 135 EKVAVIQILAKASGYEGMCGGQAIDLHFTNQDIDLETLTQLHRLKTGALLG-ACVDMVIA 193

Query: 200 AHASQNEKER--LRCFGENLGIIFQLADDLLDCEED 233
              S + + +  L  F  +LG+ FQ+ DD+LD   D
Sbjct: 194 LVPSLDVEHQALLHTFSRSLGLAFQVQDDILDITSD 229


>gi|260912495|ref|ZP_05919030.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633374|gb|EEX51529.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 324

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 12/199 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   IRY L +GGK+IR  L     +LF  +  + L     +E  H Y+L+HDDL  MDN
Sbjct: 27  LYEPIRYVLSIGGKRIRPTLALLAYNLFKDDPESILAPACGLETYHNYTLLHDDL--MDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG PTVH ++D  TAI++G+ +L  A+++++       D+ + + ++ L     L+
Sbjct: 85  AALRRGMPTVHKRWDANTAILSGDSMLVLAYQLVAQC-----DSSKLKPVMELFTETALE 139

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ  D+  E    + E +   + ++KT  L+    + GA++A A Q + + L  FG
Sbjct: 140 -IGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACGMKMGALLADAPQQDADLLYKFG 198

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G+ FQL DD LD   D
Sbjct: 199 EQIGLAFQLQDDFLDVYGD 217


>gi|187932330|ref|YP_001886591.1| geranyltranstransferase [Clostridium botulinum B str. Eklund 17B]
 gi|187720483|gb|ACD21704.1| putative geranyltranstransferase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 289

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 117/204 (57%), Gaps = 8/204 (3%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +  +N  +  +  Y++ +GGK+IR  L+    SL+  N    + + AAIE IH YSLIHD
Sbjct: 21  RNSYNKVVYESAGYSVNIGGKRIRPILLILTYSLYKDNIEKIMPMAAAIEMIHTYSLIHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS- 149
           DLP MD+  +RRGKPT H  + E  A++AG+ LL  A  ++     +L +   S L  S 
Sbjct: 81  DLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKSSLELGE---SALKASY 137

Query: 150 -LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            ++   G +GM+GGQ++D+  E   I + ++  + + KTG L+  +  +G I+A     +
Sbjct: 138 EISKAAGPEGMIGGQVVDVLSEVSEISKEELEYMHEKKTGELIRVSIVAGGILARVPSGD 197

Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
            E L  +G+ LG+ FQ+ DD+LD 
Sbjct: 198 IEALNEYGKKLGLAFQIKDDILDV 221


>gi|254262249|emb|CAZ90576.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter
           helveticus]
          Length = 313

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +LQ   K I+  LD LL       QT+ +D +  A+R A L  GK+IR  L+   A    
Sbjct: 15  ELQSMRKNIEHRLDSLL------PQTEESDLVTQAMRDATLAPGKRIRPLLMLLTARDLG 68

Query: 67  V--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +H   L +  A+E IH  SL  DD+P MDN  +RRG PT+H ++ E  AI+A   LL
Sbjct: 69  CEPSHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGLPTIHRKFGENVAILAAVALL 128

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           + AF ++S+ +  L D  R+  +  L+  +G QG++ GQ  D+++  E      +     
Sbjct: 129 SKAFGVVSAAEG-LTDAGRAIAVGELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTND 187

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KTG L   + +  AI A+AS   + RLR F  + G  FQL DDL+D
Sbjct: 188 LKTGVLFSASLQMAAIAANASGAARARLRSFALDFGQAFQLLDDLID 234


>gi|284044529|ref|YP_003394869.1| polyprenyl synthetase [Conexibacter woesei DSM 14684]
 gi|283948750|gb|ADB51494.1| Polyprenyl synthetase [Conexibacter woesei DSM 14684]
          Length = 296

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 115/225 (51%), Gaps = 12/225 (5%)

Query: 17  DTILDDLLLQTASHM--------QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           D   DDL  Q   ++        +T   D L  A+RY+LL GGK+IR  L    A     
Sbjct: 4   DAYPDDLRRQVEEYLAAIRFVAAETAGADGLEEAMRYSLLAGGKRIRPVLALATARAIER 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   AL + AA+E IH YSLIHDDLP+MD+  +RRG+PT H  + E  AI+AG+GL   A
Sbjct: 64  DPAEALPIAAALELIHTYSLIHDDLPAMDDDDLRRGRPTCHKAFGENVAILAGDGLYAEA 123

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKMKTG 186
           F  +   +      I + +   L    G+ GM+GGQ LD+ D    D   +  +  +KTG
Sbjct: 124 FRHVLERQAGEPAAILAAVR-ELASATGVNGMVGGQYLDVTDSAPRDAAGLRHLHSLKTG 182

Query: 187 ALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230
            L+  +     ++A        +  R F   LG++FQ+ DD+LD 
Sbjct: 183 RLIGASIMCPLLLAPDQPRATIDSFRSFASELGVLFQIVDDILDV 227


>gi|303233683|ref|ZP_07320337.1| polyprenyl synthetase [Finegoldia magna BVS033A4]
 gi|302495117|gb|EFL54869.1| polyprenyl synthetase [Finegoldia magna BVS033A4]
          Length = 269

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 6/202 (2%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           ND++  A++Y L+  G K++R  L      +FN +    +    +IE IH YSL+HDDL 
Sbjct: 21  NDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNESISEPMNYALSIELIHNYSLVHDDLE 80

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MD+   RRGK TVH +Y E  A++ G+ LL Y+FE++S     +K+ + +     +   
Sbjct: 81  CMDDDDYRRGKLTVHKKYGEDIAVLVGDALLNYSFEVLSES---IKNEVDAMCANYIVKK 137

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            G  GM+ GQ+LDI  E I E  +  I   KT  L+  +  S  I++        +L  +
Sbjct: 138 SGCFGMIRGQLLDIDSE-ISEDNIIEIYDKKTCNLLKASTVSAGILSKVDDETLLKLENY 196

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
             NLG+ FQ+ DDL+D E D+ 
Sbjct: 197 AFNLGMAFQIIDDLMDYENDIK 218


>gi|254490429|ref|ZP_05103615.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010]
 gi|224464173|gb|EEF80436.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010]
          Length = 288

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 126/230 (54%), Gaps = 12/230 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           +Q++  +I+  LD  L    +  +   + RL+ A+RYA LGG K++R+ LV         
Sbjct: 1   MQQHQAQIELALDKRL----TAQKQPGSQRLVEAMRYATLGGGKRLRALLVYATGEAMGA 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N +      AA+E IH YSL+HDD+P MD+  +RRG+PT H  +DE TA++ G+ L T A
Sbjct: 57  NPVALDAAAAAVEMIHAYSLVHDDMPIMDDDDLRRGRPTCHKAFDEATALLVGDALQTMA 116

Query: 128 FEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMK 184
           FE +          +   LM+  L    G  GM GGQ +D++   + +D   +  + K+K
Sbjct: 117 FETLCDNSLTAAQQV---LMIKRLAQASGAFGMAGGQAVDLESVGKKLDLNALQSMHKLK 173

Query: 185 TGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+  +   GA+ A    +E  +RL  + + +G+ FQ+ DD+LD   D
Sbjct: 174 TGALIRASVLLGALAASDYDDETLQRLERYADCIGLAFQVQDDVLDVIAD 223


>gi|83589030|ref|YP_429039.1| polyprenyl synthetase [Moorella thermoacetica ATCC 39073]
 gi|83571944|gb|ABC18496.1| Polyprenyl synthetase [Moorella thermoacetica ATCC 39073]
          Length = 320

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 12/194 (6%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + RL   + YAL GGK +R  LV  CA     + L A RV AAIE +H  SL+HDD+  +
Sbjct: 18  DPRLQELLDYALEGGKGLRPTLVFLCARFGIYDALEAGRVAAAIELVHLASLVHDDI--L 75

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RR +P ++  Y  V A++ G+ L   AF +++  K          ++ ++T  I 
Sbjct: 76  DGAAVRRNRPALYRAYGTVPAVLTGDYLFATAFGLLAKGK--------KAVLYTVTEAI- 126

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            + M  G++  ++         F     KT AL+  AC  GAI+    +N++E L  FG 
Sbjct: 127 -RSMCSGEIGQLKGGLAGPEAYFTYIGQKTAALISAACRCGAILGRVKRNQQECLAQFGW 185

Query: 216 NLGIIFQLADDLLD 229
           +LG+ +Q+ DD LD
Sbjct: 186 HLGLAYQIVDDCLD 199


>gi|326800486|ref|YP_004318305.1| geranyltranstransferase [Sphingobacterium sp. 21]
 gi|326551250|gb|ADZ79635.1| Geranyltranstransferase [Sphingobacterium sp. 21]
          Length = 324

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 12/202 (5%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L +GGK++R  L    A LF       L    AIE  H ++L+HDD+  MD 
Sbjct: 27  LYEPIKYFLAIGGKRLRPVLTLLAAELFGATIKEGLPAALAIEMFHNFTLMHDDI--MDE 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+ T+H ++D  TAI++G+  L  A+++++  K +L   +          N   Q
Sbjct: 85  APLRRGRETIHKKWDINTAILSGDATLIRAYQLLAECKPELLAELLK------VFNKMAQ 138

Query: 158 GMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ LD+  E    + E +   + ++KT  L+  A E GAI+  A + ++  L  FG
Sbjct: 139 EVCEGQQLDMDFEKLATVTEEEYLHMIRLKTSVLLGAALEIGAILGGADKQDRSNLYTFG 198

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
            N+GI FQL DD+LD   D  K
Sbjct: 199 VNIGIAFQLQDDILDVYGDPSK 220


>gi|294778249|ref|ZP_06743675.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
 gi|294447877|gb|EFG16451.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
          Length = 325

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 22/224 (9%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D LL +  +++ T    R    L + I Y L LGGK+IR  L+     L+  N    L  
Sbjct: 6   DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
            A IE  H Y+L+HDDL  MD   +RR KPTVH  +DE TAI++G+ +L  A+ ++++ P
Sbjct: 66  AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123

Query: 135 KTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM-IQKMKTGALM 189
           +  LK   +I SQ  L +           GQ  D++ E  ++  V  +M + ++KT  L+
Sbjct: 124 ERYLKQVMDIFSQTALEICE---------GQQWDMEFETRNDVTVPEYMEMIRLKTSVLL 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + GA++  AS+++  +L  FG  +G+ FQL DD LD   D
Sbjct: 175 SAALKIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGD 218


>gi|110677528|ref|YP_680535.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans
           OCh 114]
 gi|109453644|gb|ABG29849.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans
           OCh 114]
          Length = 294

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 103/199 (51%), Gaps = 11/199 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSM 95
           RL SA+ YA   GG +IR  ++T  A     +        A A+E IHC SL+HDDLP  
Sbjct: 27  RLSSALGYATAPGGARIRPTILTSVALACGDDQPKLTDAAASALELIHCASLVHDDLPCF 86

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRGKP+VH  Y E  A++ G+ L+  AFEI++       D + +Q++L L+   G
Sbjct: 87  DDADTRRGKPSVHKAYSEPLAVLTGDSLIVLAFEILARQSGLAPDRV-AQMILILSQRTG 145

Query: 156 LQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  G+  GQ  + + E      +    + KTGAL   A + GA+   A+  E E     G
Sbjct: 146 MPGGICAGQGWESEAEI----DLSAYHQAKTGALFIAATQMGAV---AAGQEAEPWFELG 198

Query: 215 ENLGIIFQLADDLLDCEED 233
             +G  FQ+ADDL D   D
Sbjct: 199 ARIGEAFQVADDLRDALYD 217


>gi|88812690|ref|ZP_01127937.1| geranyltranstransferase [Nitrococcus mobilis Nb-231]
 gi|88790106|gb|EAR21226.1| geranyltranstransferase [Nitrococcus mobilis Nb-231]
          Length = 298

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 13/228 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L E   R++  L+  L    +H       RL  A+RYA+LGG K++R  LV        +
Sbjct: 8   LPEYQARVEAALERWLPPAQTH-----PARLHEAMRYAVLGGGKRMRPLLVYATGDALRL 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                     A+E IHCYSL+HDDLP+MD+  +RRG+PT H  YDEVTAI+ G+ L + A
Sbjct: 63  PRQVLDAPACAVELIHCYSLVHDDLPAMDDDDLRRGRPTCHRAYDEVTAILVGDALQSLA 122

Query: 128 FEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-- 183
           F ++S  +      ++ +L +   L+   G +GM GGQ LD +     +  V  ++ M  
Sbjct: 123 FRVLSHCRDGEAGPVQGRLRMIEVLSLAAGSRGMAGGQSLDYE-AVGRQVTVAELEDMHI 181

Query: 184 -KTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KTGAL+  +   GA+    A+    ERL  + + +G+ FQ+ DD+LD
Sbjct: 182 HKTGALIRASVMLGALADTTANTTCTERLDHYAKCVGLAFQVQDDVLD 229


>gi|296136077|ref|YP_003643319.1| Polyprenyl synthetase [Thiomonas intermedia K12]
 gi|295796199|gb|ADG30989.1| Polyprenyl synthetase [Thiomonas intermedia K12]
          Length = 324

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 12/205 (5%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+ YA  +GGK++R  LV         +     R   A+E +H YSL+HDDLP MD
Sbjct: 54  QLHEAMHYAAAMGGKRVRPLLVWAAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMD 113

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT H+Q+ E  A++AG+ L   A+E++ +P+  +   ++++L   L    G 
Sbjct: 114 DDVLRRGQPTTHVQFGEALALLAGDALQALAYEVL-TPEADIAPALQARLCALLARASGA 172

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA------LMCFACESGAIMAHASQNEKE 208
            GM GGQ LDI      +    +  +   KTGA      LM  AC  G   A  +Q    
Sbjct: 173 DGMAGGQTLDILATGGAVSGDDLMHMHSRKTGALLKASVLMGAAC-GGFDTARPAQTYTA 231

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  +G+ +G+ FQ+ DD+LD   D
Sbjct: 232 -LETYGDAVGLAFQVVDDILDVTAD 255


>gi|150399805|ref|YP_001323572.1| polyprenyl synthetase [Methanococcus vannielii SB]
 gi|150012508|gb|ABR54960.1| Polyprenyl synthetase [Methanococcus vannielii SB]
          Length = 317

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 114/201 (56%), Gaps = 12/201 (5%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            + +  L +A ++ L  GGK+IR +L      L   +    L    ++E IH Y+LIHDD
Sbjct: 19  VEKDTNLYNASKHLLFAGGKRIRPYLSVLTYLLKRDDISEVLAPAISVELIHNYTLIHDD 78

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MDN   RRGKPTVHI Y E TAI+AG+ L   AFE +S+    + D+ ++  +L + 
Sbjct: 79  I--MDNDDERRGKPTVHIVYGEPTAILAGDLLYAKAFEALSN----IGDSKKALEVLKVL 132

Query: 152 HNIGLQGMLGGQM--LDIQDEFID-ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               ++ +  GQ   ++ ++EF   E  + MI K KTGAL+    E GAIMA  S  E+E
Sbjct: 133 SKACVE-VCEGQTDDMEFENEFPTLEEYLSMISK-KTGALIVAPIEIGAIMAECSSEERE 190

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  + + +G+ FQ+ DD+LD
Sbjct: 191 ALYNYAKRIGMTFQIQDDVLD 211


>gi|301308384|ref|ZP_07214338.1| polyprenyl synthetase [Bacteroides sp. 20_3]
 gi|300833854|gb|EFK64470.1| polyprenyl synthetase [Bacteroides sp. 20_3]
          Length = 324

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L     +++N +   A++    +E  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALGLEVFHNFTLLHDDL--MDE 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGL 156
              RR KPTVH  ++  TAI++G+ +L  A+++I S+    LK     Q++   T     
Sbjct: 85  ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK-----QVLDLFTQTAA- 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             + GGQ  D++ E    + E +   + ++KT  L+  A ++GA++  ASQ + + L  F
Sbjct: 139 -EICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACALKTGALLGGASQKDADHLYAF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217


>gi|325913420|ref|ZP_08175786.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B]
 gi|325477189|gb|EGC80335.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B]
          Length = 288

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%)

Query: 36  NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90
           ND   S I  Y++L GGK++R  L    A+L  ++H  +   +++   IE IH YSLIHD
Sbjct: 27  NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+            +L+  +
Sbjct: 85  DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138

Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           T  IG  GM GGQ +DI           + FID+ +      +KTG L+  + +  A  A
Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++S   +  L  F E  G  +Q+ DD++D
Sbjct: 194 NSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222


>gi|312871899|ref|ZP_07731983.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a]
 gi|312872399|ref|ZP_07732468.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091981|gb|EFQ50356.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092621|gb|EFQ50981.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a]
          Length = 288

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%)

Query: 36  NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90
           ND   S I  Y++L GGK++R  L    A+L  ++H  +   +++   IE IH YSLIHD
Sbjct: 27  NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+            +L+  +
Sbjct: 85  DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138

Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           T  IG  GM GGQ +DI           + FID+ +      +KTG L+  + +  A  A
Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++S   +  L  F E  G  +Q+ DD++D
Sbjct: 194 NSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222


>gi|331006565|ref|ZP_08329857.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
 gi|330419634|gb|EGG94008.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
          Length = 224

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 14/164 (8%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-----S 132
           A+E IH YSLIHDDLP+MD+  +RRGKPT HI +DE TAI+AG+ L  +AF I+     +
Sbjct: 2   AVEAIHAYSLIHDDLPAMDDDDLRRGKPTCHIAFDEATAILAGDALQAFAFNILCEAVDA 61

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190
            P  QLK      ++ +L+H  G  GM+GGQ +D+    + +   Q+  + ++KTGAL+ 
Sbjct: 62  DPSIQLK------MLHTLSHASGANGMVGGQSIDLAAVQQTLTLNQLETMHRLKTGALIS 115

Query: 191 FACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+    AS+++ + L  +   +G+ FQ+ DD+LD   D
Sbjct: 116 ASTRLGALSTGIASESQLQALHEYANAIGLAFQVQDDILDVTSD 159


>gi|309805530|ref|ZP_07699575.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c]
 gi|308165181|gb|EFO67419.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c]
          Length = 288

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%)

Query: 36  NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90
           ND   S I  Y++L GGK++R  L    A+L  ++H  +   +++   IE IH YSLIHD
Sbjct: 27  NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+            +L+  +
Sbjct: 85  DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138

Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           T  IG  GM GGQ +DI           + FID+ +      +KTG L+  + +  A  A
Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++S   +  L  F E  G  +Q+ DD++D
Sbjct: 194 NSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222


>gi|259501558|ref|ZP_05744460.1| geranyltranstransferase [Lactobacillus iners DSM 13335]
 gi|302191468|ref|ZP_07267722.1| geranyltranstransferase [Lactobacillus iners AB-1]
 gi|309804209|ref|ZP_07698286.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d]
 gi|309806895|ref|ZP_07700881.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b]
 gi|309808828|ref|ZP_07702713.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a]
 gi|312874432|ref|ZP_07734462.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d]
 gi|325911777|ref|ZP_08174181.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D]
 gi|329919888|ref|ZP_08276826.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G]
 gi|259167076|gb|EEW51571.1| geranyltranstransferase [Lactobacillus iners DSM 13335]
 gi|308163612|gb|EFO65882.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d]
 gi|308166713|gb|EFO68906.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b]
 gi|308167954|gb|EFO70087.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a]
 gi|311090044|gb|EFQ48458.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d]
 gi|325476283|gb|EGC79445.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D]
 gi|328936978|gb|EGG33408.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G]
          Length = 288

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%)

Query: 36  NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90
           ND   S I  Y++L GGK++R  L    A+L  ++H  +   +++   IE IH YSLIHD
Sbjct: 27  NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+            +L+  +
Sbjct: 85  DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138

Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           T  IG  GM GGQ +DI           + FID+ +      +KTG L+  + +  A  A
Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++S   +  L  F E  G  +Q+ DD++D
Sbjct: 194 NSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222


>gi|15618657|ref|NP_224943.1| geranyl transtransferase [Chlamydophila pneumoniae CWL029]
 gi|15836281|ref|NP_300805.1| geranyl transtransferase [Chlamydophila pneumoniae J138]
 gi|16752293|ref|NP_445662.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila
           pneumoniae AR39]
 gi|33242107|ref|NP_877048.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae
           TW-183]
 gi|4377054|gb|AAD18886.1| Geranyl Transtransferase [Chlamydophila pneumoniae CWL029]
 gi|7190037|gb|AAF38891.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila
           pneumoniae AR39]
 gi|8979121|dbj|BAA98956.1| geranyl transtransferase [Chlamydophila pneumoniae J138]
 gi|33236617|gb|AAP98705.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae
           TW-183]
 gi|269302537|gb|ACZ32637.1| polyprenyl synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 289

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 11/203 (5%)

Query: 41  SAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           S + YAL GG K++R  LV   A    +NH   +    A+E +H  +LI DDLP MDN  
Sbjct: 32  SPVEYALQGGGKRLRPGLVCMMAQGLGLNH-DVMDSALAVEFVHTSTLIADDLPCMDNDD 90

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151
            RRG+PTVH  +DE TA++A   L+  A+  +     +LK+        +I   ++  +T
Sbjct: 91  ERRGRPTVHKAFDEATALLASYALIPAAYSHLRLNAKKLKEQGCDPREIDIAYNIIGDIT 150

Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             NIG  G+LGGQ  D+      +  V  I   KTG+L   AC SG +           +
Sbjct: 151 DKNIGCSGVLGGQYDDMFFSNRGQEHVQSIMIKKTGSLFEIACISGWLFGGGDPQFAPII 210

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             F  N G++FQ+ DD  D ++D
Sbjct: 211 TSFSNNFGLLFQIKDDFSDLQKD 233


>gi|150401609|ref|YP_001325375.1| polyprenyl synthetase [Methanococcus aeolicus Nankai-3]
 gi|150014312|gb|ABR56763.1| Polyprenyl synthetase [Methanococcus aeolicus Nankai-3]
          Length = 320

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 118/220 (53%), Gaps = 26/220 (11%)

Query: 23  LLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +LL+    +  Q N   +L  A ++ L  GGK+IR +L      L   +    L    ++
Sbjct: 8   ILLKIEEELNRQVNKEGKLYEASKHLLFAGGKRIRPYLSVLTYLLKKDDIDEVLTPAVSV 67

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH YSLIHDD+  MDN   RRGKPTVHI Y E  AI+AG+ L T AF  IS    Q++
Sbjct: 68  ELIHGYSLIHDDI--MDNDSERRGKPTVHIVYGEPIAILAGDLLNTLAFNAIS----QME 121

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALM 189
           +  ++  +L +     ++ +  GQ  D++          DE+ D     MI K KTGAL+
Sbjct: 122 NLEKAHEILKIVSKASVK-VCEGQATDMEFEEREVIPTIDEYFD-----MISK-KTGALI 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E GA+MA  ++ E++ +  + + +G+ FQ+ DD+LD
Sbjct: 175 VAPIEIGAVMADFTEEERKAICEYAKRIGMTFQIQDDVLD 214


>gi|325103979|ref|YP_004273633.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
 gi|324972827|gb|ADY51811.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
          Length = 324

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 127/223 (56%), Gaps = 15/223 (6%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           +L D  + T S+  +  N  L   + Y L LGGK++R  L+     LF  +   A++   
Sbjct: 9   LLLDQEINTYSYPSSPRN--LYEPVSYLLGLGGKRLRPALLLLATDLFGGDVEKAVKPAM 66

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE  H +SL+HDD+  MD   +RRGKPTVH ++ + TAI++G+ +L  A+++I   +  
Sbjct: 67  AIEFFHNFSLMHDDI--MDKAPLRRGKPTVHEKWSDSTAILSGDIMLIEAYKLICEVEA- 123

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACE 194
               ++    L + + I  + +  GQ +D+   ++EF+   +   + ++KT  L+  A +
Sbjct: 124 ----VKLPACLKIFNTISTE-VCEGQQMDMNFEKEEFVSIEEYIEMIRLKTAVLLGGALK 178

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
            GA++A AS+N++E +  FG  LG+ FQL DD+LD   D P+K
Sbjct: 179 IGAVIADASENDQELINDFGTKLGVAFQLQDDILDVYGD-PEK 220


>gi|146299023|ref|YP_001193614.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101]
 gi|146153441|gb|ABQ04295.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101]
          Length = 324

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 12/196 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L    A +F+ N+ TAL    A+E  H +SL+HDD+  MD+
Sbjct: 27  LYEPIEYILGLGGKRMRPVLTLMAAEVFDTNYKTALPAAMAVEVFHNFSLVHDDI--MDD 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+ TVH ++D  T I++G+ +L  A++     + ++  ++       L     L+
Sbjct: 85  APLRRGQVTVHEKWDLNTGILSGDAMLILAYQYFEQYEPEVFRDLA-----KLFSKTALE 139

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ  D+  E  +   +    KM   KT  L+  A + GAI+A  S+ E + +  FG
Sbjct: 140 -VCEGQQWDVDFEQRNNVTIPEYLKMIEYKTAVLVAAAMKMGAIVAKTSEKEGDLIYDFG 198

Query: 215 ENLGIIFQLADDLLDC 230
            NLG+ FQL DD LD 
Sbjct: 199 LNLGLAFQLQDDYLDA 214


>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
 gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
          Length = 367

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 115/202 (56%), Gaps = 16/202 (7%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYALL GGK++R  L     ++       A+   AA+E +H  SL+HDDLP MD+  +
Sbjct: 98  AMRYALLAGGKRVRPALCLAACAVVGGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDL 157

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLT 151
           RRGKPT H+ Y E  A++AG+ LL+ +F  ++S         P+      +R+  +  L 
Sbjct: 158 RRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPDVDPEKHPARVVRA--IGELA 215

Query: 152 HNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
             IG +G++ GQ++D++     ET    ++  I   KT AL+  +   GAI+   +  + 
Sbjct: 216 RCIGSEGLVAGQVVDLEMTGTSETVPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQI 275

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           ERLR +  ++G++FQ+ DD+LD
Sbjct: 276 ERLRKYARSIGLLFQVVDDILD 297


>gi|110835026|ref|YP_693885.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
           SK2]
 gi|110648137|emb|CAL17613.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
           SK2]
          Length = 302

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 111/197 (56%), Gaps = 7/197 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA L GGK+IR  LV   A L       A     A+E IH YSL+HDDLP+MD
Sbjct: 39  RLSHAMRYAALSGGKRIRPLLVYGAAQLAGAPLAKADVPAVAVELIHAYSLVHDDLPAMD 98

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG+PT H  +DE TAI+AG+ L T AFE+++      +D  R  L+  L    G+
Sbjct: 99  DDDLRRGQPTCHKAFDEATAILAGDTLHTRAFELLAC-HGDYRDGSRISLIQHLCQAAGV 157

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNE-KERLRC 212
            GM  GQM D+  +   +T V  +++M   KTG L+  + + G  +A          L  
Sbjct: 158 DGMAAGQMQDMLAQGQQQT-VAALEEMHYLKTGRLITASLQLGYFVAEKDDPSLLANLTE 216

Query: 213 FGENLGIIFQLADDLLD 229
           FG+ +G+ FQ+ DD+LD
Sbjct: 217 FGDAIGLAFQIQDDILD 233


>gi|150004490|ref|YP_001299234.1| putative isoprenoid biosynthesis related protein [Bacteroides
           vulgatus ATCC 8482]
 gi|149932914|gb|ABR39612.1| putative isoprenoid biosynthesis related protein [Bacteroides
           vulgatus ATCC 8482]
          Length = 325

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 22/224 (9%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D LL +  +++ T    R    L + I Y L LGGK+IR  L+     L+  N    L  
Sbjct: 6   DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
            A IE  H Y+L+HDDL  MD   +RR KPTVH  +DE TAI++G+ +L  A+ ++++ P
Sbjct: 66  AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123

Query: 135 KTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM-IQKMKTGALM 189
           +  L+   +I SQ  L +           GQ  D++ E  ++  V  +M + ++KT  L+
Sbjct: 124 ERYLRQVMDIFSQTALEICE---------GQQWDMEFETRNDVTVPEYMEMIRLKTSVLL 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + GA++  AS+++  +L  FG  +G+ FQL DD LD   D
Sbjct: 175 SAALKIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGD 218


>gi|21328644|gb|AAM48650.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
           proteobacterium]
          Length = 295

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 118/224 (52%), Gaps = 20/224 (8%)

Query: 13  SKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNVN 68
           S RI+  + D   L QTA         +L SA+RYA+  GG +IR + L++  A+  +  
Sbjct: 4   STRIEAAISDAVNLGQTAPSPA-----KLASALRYAVSPGGARIRPTILMSVAAACGDDR 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                   AA+ECIHC SL+HDDLP  D+   RRGKP++H  Y E  A++AG+ L+  AF
Sbjct: 59  PELTNAAAAALECIHCASLVHDDLPCFDDAETRRGKPSLHRAYSEPLAVLAGDSLIVMAF 118

Query: 129 EIISSPKTQLKDNIRS-QLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +I++  +    D  R+  LM  L    G+  G+  GQ  +  ++ ID   +    + KTG
Sbjct: 119 QILT--RHASIDPQRAIGLMNILAEQTGMPNGICAGQGWE-SEQKID---LRAYHRAKTG 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AL   A + GAI A     + + L   G  +G  FQ+ADDL D 
Sbjct: 173 ALFVAATQMGAIAAGQDGAQWDEL---GSRIGEAFQVADDLRDA 213


>gi|218885233|ref|YP_002434554.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756187|gb|ACL07086.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 313

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 22/212 (10%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +++ Y+L  GGK++R  L    A+LF +     +   AAIE IH YSLIHDDLP+MD
Sbjct: 34  RLRASMEYSLNAGGKRVRPVLCLTTAALFGLPTERVMPFAAAIEMIHTYSLIHDDLPAMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----------- 145
           +  +RRGKP+ H  +DE TAI+AG+GLLT AF+ ++     +      +           
Sbjct: 94  DDDLRRGKPSNHKMFDEATAILAGDGLLTDAFDFMAGVGAGVGAAAGDENGGNAAIPAAN 153

Query: 146 ---LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGA 197
               + ++    G  GM+GGQ LD+  E+   T V +     +  MKTGAL+  +C SGA
Sbjct: 154 VLAALRAVARAAGAPGMVGGQALDM--EYTGRTGVTLEEMAAMHAMKTGALLRASCLSGA 211

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  +   R+  +G ++G  FQ+ DD+LD
Sbjct: 212 LLAGADADALARIADYGAHIGAAFQIVDDILD 243


>gi|256422682|ref|YP_003123335.1| polyprenyl synthetase [Chitinophaga pinensis DSM 2588]
 gi|256037590|gb|ACU61134.1| Polyprenyl synthetase [Chitinophaga pinensis DSM 2588]
          Length = 323

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 117/226 (51%), Gaps = 19/226 (8%)

Query: 22  DLLLQTASHMQTQH----NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           DL +Q   H   +H      +L  A  + L +GGK+IR  L      LF+  H  A  VG
Sbjct: 6   DLTIQFGEHFSKEHFPKEPKKLYDAASHILNIGGKRIRPILSIMGNELFDDIHPDAFHVG 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E  H ++L+HDD+  MD   +RR +PTVH  Y +  AI+AG+ +L   +E ++  + 
Sbjct: 66  TAVELFHNFTLVHDDI--MDKAPLRRNQPTVHTLYGDTAAILAGDVMLIKVYEYLNKVQP 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCF 191
             K     Q +++  +   ++ +  GQ +D+  E ++  QV       +  +KT  L+  
Sbjct: 124 HYK-----QKLITAFNKAAIE-VCEGQQIDMDFEDMEPEQVKYDDYVKMIALKTSVLLAA 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           + + GAI+   S   ++ +  FG+N+GI FQ+ DD LD   D P+K
Sbjct: 178 SLQMGAIIGGGSDYNQQHIYEFGKNIGIAFQIQDDYLDAFGD-PEK 222


>gi|225573687|ref|ZP_03782442.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038980|gb|EEG49226.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM
           10507]
          Length = 295

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 7/205 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ Y++L GGK++R  ++ E   +F            A+E IH +SLIHDDLP++DN
Sbjct: 32  LARAMNYSMLAGGKRLRPLMMQEVYRMFGGTQRVIEPFMVAMEMIHTHSLIHDDLPALDN 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGL 156
              RRG+ T    + E   +I+G  LL YA+E+  S         R  L L  L    G+
Sbjct: 92  DEYRRGRETTWKVFGEDMGVISGAALLNYAYEVALSGFELTDRTERVVLALRVLAAKTGM 151

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GMLGGQ +D++++   +D   +  I + KT ALM  +   GAI+A A   +  ++    
Sbjct: 152 YGMLGGQSVDVENDRKPLDLQLLDYIYENKTSALMEASMMVGAILAGAENTKIRQVEKAA 211

Query: 215 ENLGIIFQLADDLLDC---EEDLPK 236
             +G+ FQ+ DD+LD    +E+L K
Sbjct: 212 GCVGLAFQIEDDILDVTSTQEELGK 236


>gi|186472776|ref|YP_001860118.1| polyprenyl synthetase [Burkholderia phymatum STM815]
 gi|184195108|gb|ACC73072.1| Polyprenyl synthetase [Burkholderia phymatum STM815]
          Length = 291

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 18/208 (8%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+RYA+LGG K++R  L      L            AA+E IH YSL+HDD+P MD
Sbjct: 25  RLHEAMRYAVLGGGKRVRPLLCHAAGELAGAKAECLDAASAALEMIHVYSLVHDDMPCMD 84

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTH 152
           +  +RRGKPTVH++YDE TA++ G+ L + AF  ++    SP  Q      + L+  L  
Sbjct: 85  DDDLRRGKPTVHVKYDEATALLVGDALQSQAFVALTSDVFSPAQQ------AALVRELAL 138

Query: 153 NIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--- 207
             G  GM GGQ +D+      +   Q+  + ++KTGAL+  A   GA+            
Sbjct: 139 ASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKTGALLRAAVRMGALTGQVDNGGPDAK 198

Query: 208 --ERLRCFGENLGIIFQLADDLLDCEED 233
             + L  +   +G+ FQ+ DD+LD   D
Sbjct: 199 ALQALDAYSAAVGLAFQVVDDILDVTTD 226


>gi|126662951|ref|ZP_01733949.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38]
 gi|126624609|gb|EAZ95299.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38]
          Length = 324

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 16/198 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L    + +FNV+   A+    AIE  H +SLIHDD+  MD+
Sbjct: 27  LYEPIEYILSLGGKRMRPVLTLMASEVFNVDCEKAVPAATAIEVFHNFSLIHDDI--MDD 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIG 155
             +RRG  TVH ++D  T I++G+ +L  A++   +  PKT        Q +  L     
Sbjct: 85  APLRRGNQTVHEKWDLNTGILSGDAMLILAYQFFENYEPKT-------FQKLAKLFSKTA 137

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212
           L+ +  GQ  D+  E  D+  +    KM   KT  L+  A + GAI+A  S    + +  
Sbjct: 138 LE-VCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAAMKMGAIVAETSDENADLIYD 196

Query: 213 FGENLGIIFQLADDLLDC 230
           FG NLGI FQL DD LD 
Sbjct: 197 FGLNLGIAFQLQDDYLDA 214


>gi|149914252|ref|ZP_01902783.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b]
 gi|149811771|gb|EDM71604.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b]
          Length = 260

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 12/185 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG +IR  ++   A     +        A A+E IHC SL+HDDLP  D+  IRRGKP+V
Sbjct: 8   GGARIRPTILLSVAMACGDDRPDVSDAAASALELIHCASLVHDDLPCFDDADIRRGKPSV 67

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQ-GMLGGQML 165
           H  + E  A++AG+ L+  AFE+++  +  + D  R ++LM SL    G+  G+  GQ  
Sbjct: 68  HRAFSEPLAVLAGDSLIVLAFEVLA--RQAITDPARAARLMTSLAERTGMPGGICAGQGW 125

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + + E      +    + KTGAL   A E GAI   A+ ++ +  R  G  +G  FQ+AD
Sbjct: 126 ESEPEV----DLAAYHRSKTGALFIAATEMGAI---AAGHDPDNWRDLGALIGEAFQVAD 178

Query: 226 DLLDC 230
           DL D 
Sbjct: 179 DLRDA 183


>gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Pyrococcus sp. NA2]
 gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Pyrococcus sp. NA2]
          Length = 341

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 19/230 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L  +++E +K +D  L +++ +    +  +      +A  Y L GGK++R F+V      
Sbjct: 6   LFERIREKAKFVDEKLFEIIPEKEPKVLYE------AARHYPLAGGKRVRPFVVLTSTEA 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +   AL    AIE IH YSL+HDD+  MD    RRGKPTVH  +    AI+AG+ L 
Sbjct: 60  VGGDWRKALYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHRVWGINMAILAGDLLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183
           + AFE IS  + ++    +++++ ++   +    +  GQ +D+  EF +   V + + M 
Sbjct: 118 SKAFEAIS--RAEVPPEKKAKILETIV--LASNELCEGQAMDL--EFENREAVTIEEYMN 171

Query: 184 ----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               KTGAL   + + G I+   S+     L  +G N+GI FQ+ DD+LD
Sbjct: 172 MVSGKTGALFEASAKIGGIVGSESEEYINALARWGRNVGIAFQIWDDVLD 221


>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
          Length = 363

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   N   A+    A+E IH  SLIHDDLP MD+  +
Sbjct: 102 AMRYSLLAGGKRVRPMLCFAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDL 161

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  Y E  A++AG+ LL +AFE +++    +  +     +  L  ++G +G++
Sbjct: 162 RRGKPTNHKVYGEDVAVLAGDALLAFAFEYLATATIGVPPSRILVAVAELAKSVGTEGLV 221

Query: 161 GGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ+ D+    +  +    +  I   KT AL+  +   GAI+   +  E ++LR F   +
Sbjct: 222 AGQVADLACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFARCI 281

Query: 218 GIIFQLADDLLD 229
           G++FQ+ DD+LD
Sbjct: 282 GLLFQVVDDILD 293


>gi|299141403|ref|ZP_07034540.1| polyprenyl synthetase [Prevotella oris C735]
 gi|298577363|gb|EFI49232.1| polyprenyl synthetase [Prevotella oris C735]
          Length = 323

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 19/225 (8%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           ++LL++    +     DR    L + ++Y L +GGK+IR  L+     LF  +  + L  
Sbjct: 4   EELLVKVNDFLDNLKYDRKPSGLYAPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMP 63

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
             A+E  H Y+L+HDDL  MDN  +RRG  TVH ++D  TAI++G+ +L  A+E ++   
Sbjct: 64  ACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAYERMAKCN 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
              L D + +    +L   IG      GQ  D++ E    + E +   + ++KT  L+  
Sbjct: 122 PVYLSDVLHTFTETAL--EIG-----EGQQYDMEFETRNDVTEDEYIEMIRLKTSVLLAC 174

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A + GAI+A AS+ +++ L  FGE +G+ FQL DD LD   D PK
Sbjct: 175 AQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGD-PK 218


>gi|86140814|ref|ZP_01059373.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella
           blandensis MED217]
 gi|85832756|gb|EAQ51205.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella
           blandensis MED217]
          Length = 324

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 111/228 (48%), Gaps = 17/228 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           RID   +  +      +  +    L   I Y L LGGK++R  L      +F  +H  AL
Sbjct: 3   RIDQYTEVFVAYLNDKLAIKEPANLYEPIHYILQLGGKRLRPVLTLMATDIFESDHQKAL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E  H +SL+HDD+  MD+  +RRG+ TVH ++D  T I++G+ +L  A+     
Sbjct: 63  DAALAVEVFHNFSLVHDDI--MDDAPLRRGEETVHEKWDVNTGILSGDAMLIRAY----- 115

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLDIQDEFIDETQVFMIQKM---KTGAL 188
              QL +N   +   +L        +    GQ  D+  E  D+  +    KM   KT  L
Sbjct: 116 ---QLFENYEGETFRALAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  A + GAI+A+AS     R+  +G +LGI FQL DD LD   D PK
Sbjct: 173 VGAALKMGAIVANASAENANRIYEYGRDLGIAFQLQDDYLDAFGD-PK 219


>gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
 gi|167656169|gb|EDS00299.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
          Length = 302

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 15/233 (6%)

Query: 2   NGGLPSKLQEN----SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSF 56
           +GG  +  +E      K++ T+ D      A +        L  A  Y+L  GGK+IR  
Sbjct: 12  DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYKA------LYDAASYSLEAGGKRIRPV 65

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L  E   +   +   A+    A+E IH +SLIHDDLP MDN  +RRG+P+ H  + E  A
Sbjct: 66  LAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDNDDMRRGRPSCHKAHGEAVA 125

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++AG+ L  YA + I       +   +   M+   ++  L GM+ GQ +D   +F     
Sbjct: 126 LLAGDALSAYAGKYICDSDLSAE---KKTAMIKELYDRTL-GMIEGQTIDTDGKFDTLDG 181

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  + +MKT  L+  A   G I A A + +    R +  ++G+ FQ+ DD+LD
Sbjct: 182 LLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILD 234


>gi|113868691|ref|YP_727180.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16]
 gi|113527467|emb|CAJ93812.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16]
          Length = 294

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 4/198 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYA L GGK++R  LV     +             A+E IH YSL+HDD+P MD+
Sbjct: 33  LHEAMRYAALSGGKRVRPLLVHAAGEVSGAAPAACDAAACAVEMIHAYSLVHDDMPCMDD 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+PTVH  YDE TA++ G+ L T AF I+ +    +    R QL+  L    G  
Sbjct: 93  DDLRRGRPTVHKAYDEATALLVGDALQTQAF-IVLAGAGAIAPAARLQLVAELALASGST 151

Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM GGQ +D+Q+    +    +  + +MKTGAL+  +   GA+           L  +  
Sbjct: 152 GMAGGQAIDLQNVGRAMTREALEAMHRMKTGALLRASVRMGALCGEIDAEGLAALDRYAA 211

Query: 216 NLGIIFQLADDLLDCEED 233
            +G+ FQ+ DD+LD   D
Sbjct: 212 AVGLAFQVVDDILDVTAD 229


>gi|309809474|ref|ZP_07703332.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170146|gb|EFO72181.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D]
          Length = 288

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 28/209 (13%)

Query: 36  NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90
           ND   S I  Y++L GGK++R  L    A+L  ++H  +   +++   IE IH YSLIHD
Sbjct: 27  NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+            +L+  +
Sbjct: 85  DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138

Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           T  IG  GM GGQ +DI           + FID+ +      +KTG L+  + +  A  A
Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAEYA 193

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
            +S   +  L  F E  G  +Q+ DD++D
Sbjct: 194 SSSDKVQMNLLHFAEAFGRAYQIYDDIVD 222


>gi|254882776|ref|ZP_05255486.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319643916|ref|ZP_07998491.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A]
 gi|254835569|gb|EET15878.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317384440|gb|EFV65407.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A]
          Length = 325

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 120/224 (53%), Gaps = 22/224 (9%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D LL +  +++ T    R    L + I Y L LGGK+IR  L+     L+  N    L  
Sbjct: 6   DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
            A IE  H Y+L+HDDL  MD   +RR KPTVH  +DE TAI++G+ +L  A+ ++++ P
Sbjct: 66  AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNCP 123

Query: 135 KTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FM-IQKMKTGALM 189
           +  LK   +I SQ  L +           GQ  D++ E  ++  V  +M + ++KT  L+
Sbjct: 124 ERYLKQVMDIFSQTALEICE---------GQQWDMEFETRNDVTVPEYMEMIRLKTSVLL 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + GA++   S+++  +L  FG  +G+ FQL DD LD   D
Sbjct: 175 SAALKIGAVLGGGSEDDARKLYDFGIKMGLAFQLQDDYLDVYGD 218


>gi|62959205|gb|AAY23710.1| farnesyl diphosphate synthase [Roseobacter sp. JL-129]
          Length = 144

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 7/136 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH ++DE TA++ G+ L T  FE++ SP+   +  +RS L L+L    G +GM
Sbjct: 12  LRRGLPTVHKKWDEGTAVLVGDALQTLGFELVLSPECHPEPAVRSDLALTLAKAAGAKGM 71

Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LDI  E  D+     ++  +Q  KTGAL+ ++ E+GA +A A   +   L  + +
Sbjct: 72  VLGQALDIAAETADQPLTLDEIIALQNGKTGALIRWSAEAGARLAKA---DIAPLTAYAD 128

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ADD+LD E
Sbjct: 129 ALGLAFQIADDILDVE 144


>gi|152986216|ref|YP_001346444.1| geranyltranstransferase [Pseudomonas aeruginosa PA7]
 gi|150961374|gb|ABR83399.1| geranyltranstransferase [Pseudomonas aeruginosa PA7]
          Length = 295

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 10/224 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  LD L +     +      RL  A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDGALDALFVAPREELH-----RLYQAMRYSVMNGGKRVRPLLAYAACEALQGEAQRAD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL   AFE+++ 
Sbjct: 67  AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
            +   ++      ML+ L    G  GM+GGQ +D+    +  D+  + ++ + KTGAL+ 
Sbjct: 127 GRRNPQEPTVCLEMLTHLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186

Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA+ +  A       L  + + +G+ FQ+ DD+LD E D
Sbjct: 187 ASVRLGALASGRAEAATLAALERYAQAIGLAFQVQDDILDVESD 230


>gi|89093477|ref|ZP_01166425.1| dimethylallyltransferase [Oceanospirillum sp. MED92]
 gi|89082167|gb|EAR61391.1| dimethylallyltransferase [Oceanospirillum sp. MED92]
          Length = 293

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 13/231 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLF 65
           +L+    R+D  L++ L        ++  D LL  ++RY+L  GGK++R  LV     + 
Sbjct: 6   QLKHYQSRVDNHLENCL-------PSESIDPLLQESMRYSLFNGGKRVRPALVYLVNQIL 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A    AAIECIH YSL+HDDLP+MD+  +RRGKPT HI YDE TAI+AG+ L  
Sbjct: 59  GGTDEAADNAAAAIECIHSYSLVHDDLPAMDDDDLRRGKPTCHIAYDEATAILAGDALQC 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKM 183
            AFE++++ + Q  D+ + +L+  L+   G  GM+ GQ  D++   + +   Q+  + + 
Sbjct: 119 LAFELLANDQQQSADS-KIKLIQLLSQASGHGGMVVGQSFDLRHVGKPLTLEQLEAMHQH 177

Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  A   GA      S+ + + L  +   +G+ FQ+ DD+LD E D
Sbjct: 178 KTGALLLCAVHMGAACGPRVSKEQLDALTRYALAIGLAFQVQDDILDIEGD 228


>gi|167566511|ref|ZP_02359427.1| geranyltranstransferase [Burkholderia oklahomensis EO147]
          Length = 248

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 4/155 (2%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + AF  ++     L  +
Sbjct: 30  IHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDALQSQAFVALTD-AAALPLD 88

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM 199
            +  L+  L    G  GM GGQ +D+      +    +  + +MKTGAL+  +   GA+ 
Sbjct: 89  RQPALVRELALASGSIGMAGGQAIDLASVGHALSRDALETMHRMKTGALLRASVRMGALA 148

Query: 200 AHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
                 +  R L  +   +G+ FQ+ DD+LD   D
Sbjct: 149 GETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTD 183


>gi|307543672|ref|YP_003896151.1| polyprenyl synthetase [Halomonas elongata DSM 2581]
 gi|307215696|emb|CBV40966.1| polyprenyl synthetase [Halomonas elongata DSM 2581]
          Length = 292

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 125/232 (53%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +  + +R+D  L+ L  +     ++  +++L +A+R+ +L GGK++R  L+         
Sbjct: 7   MAADRRRVDECLETLFARG----ESAPSEQLDAAMRHGVLVGGKRLRPVLLYATGRALGA 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +         A+E +H YSL+HDDLP+MD+  +RRG+PTVH  YDE TAI+AG+ L T A
Sbjct: 63  SDEALDGPAMAVELVHAYSLVHDDLPAMDDDDVRRGRPTVHRAYDEATAILAGDALQTLA 122

Query: 128 FEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQK 182
           FE+++    P+        + ++ +L    G  GM  GQ LD+       D T +  + +
Sbjct: 123 FEVLADTGHPRL-------AAMVGTLARAAGRDGMAAGQALDLDAVGGHPDLTALATMHR 175

Query: 183 MKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
            KTGAL+  A   G ++A    +E+   L  +   +G+ FQ+ DD+LD   D
Sbjct: 176 HKTGALIHAAVRLGGLVAVPEDDERLLALERYAAAIGLAFQIRDDVLDVTGD 227


>gi|295084865|emb|CBK66388.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens
           XB1A]
          Length = 324

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L+    +L+  +  +      AIE  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPTVH  +++ TA+++G+ +L  AF  ++  P+  LK+ +    + SLT     
Sbjct: 85  SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMD---LFSLT----T 137

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A A+  + E L  F
Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDSENLYHF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G+ FQL DDLLD   D
Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217


>gi|306830872|ref|ZP_07464034.1| geranyltranstransferase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426895|gb|EFM30005.1| geranyltranstransferase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 289

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95
           L+ AI Y++  GGK+IR  +  E    F +  LT     V AA+E IH  SLIHDDLP+M
Sbjct: 25  LIEAILYSVEAGGKRIRPLIFLEILEGFGI-ELTEGHFDVAAALEMIHTGSLIHDDLPAM 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRG+ T H ++DE TAI+AG+ L    F ++++    L  + + +L+  L+   G
Sbjct: 84  DDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFGLVAN--AALSADTKVRLIAELSQASG 141

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+GGQMLD++ E   ++ +++ MI   KTG L+ F   +  I+A+ + ++ + LR  
Sbjct: 142 TYGMVGGQMLDMKGEERKLNLSELQMIHANKTGKLLTFPVVAAGIVANLAADDLKSLREA 201

Query: 214 GENLGIIFQLADDLLDC 230
           G  +G+ FQ+ DD+LD 
Sbjct: 202 GSLVGLAFQVRDDILDV 218


>gi|325286587|ref|YP_004262377.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489]
 gi|324322041|gb|ADY29506.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489]
          Length = 324

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 13/202 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L    A +F  +   A+    A+E  H +SL+HDD+  MD+
Sbjct: 27  LYEPINYILQLGGKRLRPILALMTADVFETDFKKAIPAAMAVEVFHNFSLVHDDI--MDD 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGK TVH ++D  T I++G+ +L  A+ ++        D  + + +  L     LQ
Sbjct: 85  APLRRGKATVHEKWDINTGILSGDAMLIEAYRLLEQ-----YDGEQYKKLNVLFSTTALQ 139

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ  D+  E  D+  +    KM   KT  L+  A + GAI+A  +   ++ +  FG
Sbjct: 140 -VCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVAAAMKMGAIIAETTVENEDLIYDFG 198

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
           +NLGI FQL DD LD   D PK
Sbjct: 199 KNLGIAFQLQDDYLDAFGD-PK 219


>gi|312874544|ref|ZP_07734569.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b]
 gi|315653403|ref|ZP_07906325.1| geranyltranstransferase [Lactobacillus iners ATCC 55195]
 gi|311089935|gb|EFQ48354.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b]
 gi|315489328|gb|EFU78968.1| geranyltranstransferase [Lactobacillus iners ATCC 55195]
          Length = 288

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 28/209 (13%)

Query: 36  NDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90
           ND   S I  Y++L GGK++R  L    A+L  ++H  +   +++   IE IH YSLIHD
Sbjct: 27  NDHKFSEIMSYSVLAGGKRLRPLLF--LATLEILSHPISEKEIKIACGIELIHTYSLIHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+            +L+  +
Sbjct: 85  DLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEASNSY------ELIKVI 138

Query: 151 THNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           T  IG  GM GGQ +DI           + FID+ +      +KTG L+  + +  A  A
Sbjct: 139 TRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEF-----LKTGCLIVASVQMAAKYA 193

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
           +++   +  L  F E  G  +Q+ DD++D
Sbjct: 194 NSNDKVQMNLLHFAEAFGRAYQIYDDIVD 222


>gi|298479711|ref|ZP_06997911.1| polyprenyl synthetase [Bacteroides sp. D22]
 gi|298274101|gb|EFI15662.1| polyprenyl synthetase [Bacteroides sp. D22]
          Length = 324

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L+    +L+  +  +      AIE  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPTVH  +++ TA+++G+ +L  AF  ++  P+  LK+ +    + SLT     
Sbjct: 85  SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMD---LFSLT----T 137

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A A+  + E L  F
Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDAENLYHF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G+ FQL DDLLD   D
Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217


>gi|182418006|ref|ZP_02949312.1| geranyltranstransferase [Clostridium butyricum 5521]
 gi|237668434|ref|ZP_04528418.1| putative geranyltranstransferase [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182378177|gb|EDT75712.1| geranyltranstransferase [Clostridium butyricum 5521]
 gi|237656782|gb|EEP54338.1| putative geranyltranstransferase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 288

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 118/203 (58%), Gaps = 6/203 (2%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +N  +  A  Y++ +GGK+IR  L      ++   +   L +  +IE IH YSLIHDDLP
Sbjct: 23  YNKVIYDASGYSINIGGKRIRPILFALSYYIYKNEYKNILPMACSIEMIHTYSLIHDDLP 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152
            MD+  +RRGKPT H  + E  A++AG+ LL  A  +I      LK+   S +    +  
Sbjct: 83  CMDDDDLRRGKPTNHKVFGENIAVLAGDNLLNEA--MILMMDYSLKNGGNSLKAAYEIAS 140

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           + G +GM+GGQ++D+  E   I + ++  +   KTGAL+  +   GA++A A +++ + L
Sbjct: 141 SAGAEGMIGGQVVDVISEGKKISKDELEYMHAKKTGALIRASIVGGAVLAGACESDVKIL 200

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           R +GE LG++FQ+ DD+LD   D
Sbjct: 201 RTYGEKLGLVFQIKDDILDVVGD 223


>gi|237713977|ref|ZP_04544458.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262407029|ref|ZP_06083578.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646605|ref|ZP_06724237.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
 gi|294809763|ref|ZP_06768447.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
 gi|229445801|gb|EEO51592.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355732|gb|EEZ04823.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638047|gb|EFF56433.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
 gi|294443003|gb|EFG11786.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
          Length = 324

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L+    +L+  +  +      AIE  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPTVH  +++ TA+++G+ +L  AF  ++  P+  LK+ +    + SLT     
Sbjct: 85  SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQEHLKEVMD---LFSLT----T 137

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A A+  + E L  F
Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASLKIGAILAGATAEDAENLYHF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G+ FQL DDLLD   D
Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217


>gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
           furiosus DSM 3638]
 gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
           furiosus DSM 3638]
          Length = 340

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 121/242 (50%), Gaps = 18/242 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L  K++E +K +D  L  L+ +    +  +      +A  Y L GGK++R F+V  
Sbjct: 1   MYDELFKKIKEKAKFVDEKLLSLIPEKEPKILYE------AARHYPLAGGKRVRPFVVLT 54

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                      A+    AIE IH YSL+HDD+  MD    RRG+PTVH  +    AI+AG
Sbjct: 55  ATEAVGGEWEKAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGRPTVHKVWGINMAILAG 112

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L + AFE IS  + ++    +++++ ++        +  GQ +D++ E  D   +   
Sbjct: 113 DLLFSKAFEAIS--RAEIPPEKKARVLETVVK--ASNELCEGQAMDLEFEKRDTVTIEEY 168

Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
            +M   KTGAL   + + G I+   ++     L  +G N+GI FQ+ DD+LD    EE L
Sbjct: 169 MRMISGKTGALFDASAKVGGIVGTDNEEYINALSTWGRNVGIAFQIWDDVLDLIADEEKL 228

Query: 235 PK 236
            K
Sbjct: 229 GK 230


>gi|317503704|ref|ZP_07961721.1| geranyltranstransferase [Prevotella salivae DSM 15606]
 gi|315665225|gb|EFV04875.1| geranyltranstransferase [Prevotella salivae DSM 15606]
          Length = 323

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 121/227 (53%), Gaps = 23/227 (10%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D+LL++    +     DR    L   ++Y L +GGK+IR  L+     LF  +  + L  
Sbjct: 4   DELLVKVNDFLSKLRYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLAYGLFKDDVESILMP 63

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E  H Y+L+HDDL  MDN  +RRG  TVH +++  TAI++G+ +L  A+E I+   
Sbjct: 64  ACGLETYHNYTLLHDDL--MDNAEMRRGHETVHRKWNANTAILSGDSMLVLAYERIAQC- 120

Query: 136 TQLKDNIRSQLMLS-LTHNIGLQGM-LG-GQMLDIQDEF---IDETQVFMIQKMKTGALM 189
                   SQ+ LS + H      + +G GQ  D+  E    + E +   + ++KT  L+
Sbjct: 121 --------SQIYLSDVLHTFTETALEIGEGQQYDMDFETRNDVTEAEYIEMIRLKTSVLL 172

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A + GAI+A AS+ +++ L  FGE +G+ FQL DD LD   D PK
Sbjct: 173 ACALKIGAILAGASKQDQDYLYKFGEQIGLAFQLQDDYLDVYGD-PK 218


>gi|14590908|ref|NP_142981.1| geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3]
 gi|90108478|pdb|1WY0|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate
           Synthetase From Pyrococcus Horikoshii Ot3
 gi|3257488|dbj|BAA30171.1| 342aa long hypothetical geranylgeranyl pyrophosphate synthetase
           [Pyrococcus horikoshii OT3]
          Length = 342

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 119/230 (51%), Gaps = 23/230 (10%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLL--SAIRYALLGGKKIRSFLVTECASL 64
           ++++E +K ID  + +L+         + + R+L  +A  Y L GGK++R F+V      
Sbjct: 9   ARIKEKAKLIDEKIFELI--------PEKDPRVLYEAARHYPLAGGKRVRPFVVLTSTEA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              + L A+    AIE IH YSL+HDD+  MD    RRGKPTVH  +    AI+AG+ L 
Sbjct: 61  VGGDPLRAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHRIWGVNMAILAGDLLF 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183
           + AFE ++  +   +   R   ++    N     +  GQ  D+  EF  ++ V + + M 
Sbjct: 119 SKAFEAVARAEIPPEKKARVLEVIVKASN----ELCEGQARDL--EFEKKSTVTIEEYME 172

Query: 184 ----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               KTGAL   + + G I+   ++   + L  +G N+GI FQ+ DD+LD
Sbjct: 173 MISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLD 222


>gi|296110654|ref|YP_003621035.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154]
 gi|295832185|gb|ADG40066.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154]
          Length = 306

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 28/204 (13%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++YA+L GGK++R  L     + F      + L+   A+E +H YSL+HDDLP+MDN  +
Sbjct: 36  MKYAVLNGGKRLRPMLSLAAMACFGQKITPSFLKAATAVEWVHSYSLVHDDLPAMDNDLV 95

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQ- 157
           RRGKP+VH Q+ E  AI+ G+ LLT AF ++++    + ++  I +  +L L+  + +Q 
Sbjct: 96  RRGKPSVHAQFGEAEAILVGDALLTGAFHVLATANDSVVEDEMISAVELLKLSQILSVQS 155

Query: 158 ---GMLGGQMLDI----QDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHA---S 203
              GM+ GQ+ D+    +   IDET    +V+M    KTGAL+ F+  +G  +++     
Sbjct: 156 GSLGMVIGQVHDMYNHGKQSKIDETWLIDEVYMP---KTGALLGFSALAGTRLSNQQDID 212

Query: 204 QNEKER------LRCFGENLGIIF 221
           Q  ++R      +  FG + GI F
Sbjct: 213 QIGQDRFDTNLAMLTFGYDFGIAF 236


>gi|262282720|ref|ZP_06060488.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA]
 gi|262262011|gb|EEY80709.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA]
          Length = 291

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 12/225 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E  ++ID  + D   + A       +D L+ +I Y++  GGK+IR  L+ E    F + 
Sbjct: 4   EEKIRQIDQTIIDYYSKKAV------SDSLVESILYSVQAGGKRIRPLLLLELVEAFGLP 57

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             +A  +V +A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  LQSAHFQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+    +L   ++  L++ L+   G  GM+GGQ LD++ E   +D  ++  I   KT
Sbjct: 118 YGLIAV--AELPSQVKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELQAIHAHKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           G L+ F   +  ++    +  + +LR  GE +G+ FQ+ DD+LD 
Sbjct: 176 GKLLAFPFVAAGLLVQVEEGVQAKLRKIGELIGLAFQVRDDILDV 220


>gi|62959227|gb|AAY23721.1| farnesyl diphosphate synthase [Microbulbifer sp. JL-463]
          Length = 142

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 5/145 (3%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLPSMD+  +RRGKPT H+ Y E TAI+ G+ L   AFE ++   T  +    + L  
Sbjct: 1   HDDLPSMDDDSLRRGKPTCHVAYGEATAILVGDALQCSAFEALA---TLSEPEFVAPLTR 57

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G +GM+ GQ LDI+ E   ++E Q+  + ++KTGAL+  +    A++A+ +++E
Sbjct: 58  ALARASGSRGMILGQTLDIEAEGSLLNEHQLEQMHRLKTGALIDASVAMPALLANVTKDE 117

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
              L  +   LG+ FQ+ DD+LD E
Sbjct: 118 VSALTKYSRALGLAFQIQDDILDVE 142


>gi|281423539|ref|ZP_06254452.1| polyprenyl synthetase [Prevotella oris F0302]
 gi|281402359|gb|EFB33190.1| polyprenyl synthetase [Prevotella oris F0302]
          Length = 323

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 19/225 (8%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           ++LL++    +     DR    L   ++Y L +GGK+IR  L+     LF  +  + L  
Sbjct: 4   EELLVKVNDFLDNLKYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLSYGLFKDDVESVLMP 63

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
             A+E  H Y+L+HDDL  MDN  +RRG  TVH ++D  TAI++G+ +L  A+E ++   
Sbjct: 64  ACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAYERMAKCN 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
              L D + +    +L   IG      GQ  D++ E    + E +   + ++KT  L+  
Sbjct: 122 PVYLSDVLHTFTETAL--EIG-----EGQQYDMEFETRNDVTEDEYIEMIRLKTSVLLAC 174

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A + GAI+A AS+ +++ L  FGE +G+ FQL DD LD   D PK
Sbjct: 175 AQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGD-PK 218


>gi|126734161|ref|ZP_01749908.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
 gi|126717027|gb|EBA13891.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
          Length = 283

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 13/200 (6%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSM 95
           +L +A+ YA+  GG +IR  ++T  A     +        G A+E IHC SL+HDDLP  
Sbjct: 16  KLAAALEYAVTPGGARIRPTILTSVAMACGDDRPELTNAAGVALEVIHCASLVHDDLPCF 75

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRGKP VH  Y E  A++AG+ L+   F+I++   + + D    +L+  L    G
Sbjct: 76  DDADMRRGKPAVHRAYSEPLAVLAGDSLIIMGFQILARAASDMPDRAL-RLIDILGTRTG 134

Query: 156 LQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  G+  GQ  + +D+      +    + KTGAL   A + GA+   A+  E E     G
Sbjct: 135 MPFGICAGQGWESEDQI----DLSAYHQAKTGALFIAATQMGAV---AAGQEAEPWEELG 187

Query: 215 ENLGIIFQLADDLLD--CEE 232
             +G  FQ+ADDL D  C+E
Sbjct: 188 ARIGEAFQVADDLRDALCDE 207


>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
          Length = 1187

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 10/239 (4%)

Query: 6   PSKLQENSKR--IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTEC 61
           PSK  +   R    T++ ++  +    +  ++  ++  A+RY++L  GGK+    +    
Sbjct: 299 PSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAV 358

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LF  + L A     A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG+
Sbjct: 359 CELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGD 418

Query: 122 GLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
            L    F  I S  P   + +    +++  +  ++G  GM  GQ LD++        V  
Sbjct: 419 ALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNSVDF 475

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD-LLDCEEDLPKK 237
           +Q+ K G +   +   G  +  A+ ++  RLR +G  +G+++Q+ DD  ++  E+L  K
Sbjct: 476 VQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDKAMEVAEELRAK 534


>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 337

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 9/197 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY LL GGK++R  L      L      TA+    A+E IH  SLI DDLP MD+  +
Sbjct: 71  AMRYTLLSGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSL 130

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRGKPT H  + E TAI+A N L++ A E  ++S    +      + +  +   +G++G+
Sbjct: 131 RRGKPTNHKVFGEKTAILAANALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGL 190

Query: 160 LGGQMLDIQD-----EFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           + GQ  D+       E  DE   ++  I   KT  L+  A   GAIM   S  E ERL+ 
Sbjct: 191 VAGQAADLAGGRMSFETEDEGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKS 250

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 251 YARCVGLMFQVMDDVLD 267


>gi|329765808|ref|ZP_08257374.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137651|gb|EGG41921.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 326

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 22/190 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R ++V +   +   N  TA+   +A+E IH ++L+HDD+  MDN  +R G PTVH
Sbjct: 40  GGKRLRPYMVIKSCQILGGNTATAMPAASAVEMIHNFTLVHDDI--MDNDEMRHGVPTVH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
            ++    AI+AG+ L + A++IIS  ++ +  +   QL+  L        +  GQ+LD+ 
Sbjct: 98  KKFGMPIAILAGDVLFSKAYQIIS--ESNISKDSTVQLVSRLAK--ACVDVCEGQLLDVK 153

Query: 168 ---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
                    Q E+I      MI K KT AL   +C  GAI A  +Q +   L  FG+NLG
Sbjct: 154 MAEGKRIPTQKEYI-----AMIGK-KTAALFDVSCSMGAICATNNQKDILNLSNFGKNLG 207

Query: 219 IIFQLADDLL 228
           I FQ+ DDL+
Sbjct: 208 IAFQITDDLI 217


>gi|262382413|ref|ZP_06075550.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295291|gb|EEY83222.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 324

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L     +++N +   A++    +E  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALGLEVFHNFTLLHDDL--MDE 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156
              RR KPTVH  ++  TAI++G+ +L  A+++I S +   LK     Q++   T     
Sbjct: 85  ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK-----QVLDLFTQTAA- 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             + GGQ  D++ E    + E +   + ++KT  L+  + ++GA++  ASQ +   L  F
Sbjct: 139 -EICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACSLKTGALLGGASQEDASNLYAF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217


>gi|62959217|gb|AAY23716.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP839]
          Length = 145

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +RRG+PT HI +DE TAI+AG+ L T AF  ++     L D +R  ++ 
Sbjct: 1   HDDLPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLAEAPG-LDDQVRLAMVR 59

Query: 149 SLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQN 205
            L    G QGM GGQ +D++   + +   Q+  + + KTGAL+  +   GA+ A   +++
Sbjct: 60  ELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATEVNED 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           +   L  + + LG+ FQ+ DD+LD E
Sbjct: 120 QLAALTVYSQTLGLAFQVHDDILDVE 145


>gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
 gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
          Length = 280

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 103/200 (51%), Gaps = 10/200 (5%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A+ Y+L  GGK+IR  L  E A L  V       +  A+E +H  SLIHDDLP MD
Sbjct: 15  RLWEAMCYSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHDDLPCMD 74

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----EIISSPKTQLKDNIRSQLMLSLTH 152
           N  +RRGKPT H  + E  A++AG+ LL + F    E + + K + K  +R+  M     
Sbjct: 75  NDSLRRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRA--MELFAS 132

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF-ACE--SGAIMAHASQNEKER 209
            +G QGM GGQ LD   +      +  +Q M +G  M    C    G  +        ER
Sbjct: 133 ALGPQGMCGGQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLGERGDALTER 192

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G  LG+ FQ+ADDLLD
Sbjct: 193 LDEYGRRLGLAFQIADDLLD 212


>gi|256839153|ref|ZP_05544663.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256740072|gb|EEU53396.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 324

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L     +++N +   A++    +E  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALGLEVFHNFTLLHDDL--MDE 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156
              RR KPTVH  ++  TAI++G+ +L  A+++I S +   LK     Q++   T     
Sbjct: 85  ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK-----QVLDLFTQTAA- 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             + GGQ  D++ E    ++E +   + ++KT  L+  + ++GA++  ASQ +   L  F
Sbjct: 139 -EICGGQQFDMEFESRMDVNEEEYIEMIRLKTAVLLACSLKTGALLGGASQEDAGNLYAF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217


>gi|170016839|ref|YP_001727758.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
 gi|169803696|gb|ACA82314.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
          Length = 304

 Score =  104 bits (260), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 14/166 (8%)

Query: 45  YALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           YA+L GGK++R  L     S FNV+     L++  A+E +H YSL+HDDLP+MDN   RR
Sbjct: 38  YAVLNGGKRLRPLLTLAVLSSFNVSVTPNLLKLATAVEWVHSYSLVHDDLPAMDNDLWRR 97

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT------QLKDNIRSQLMLSLTHNIGL 156
           G+P+VH ++ E +AI+ G+ LLT AF+++S          ++ D     ++  L+   G 
Sbjct: 98  GQPSVHAKFGESSAILVGDALLTGAFQVVSEANALAANVQKVSDEQVITIIRQLSRYAGA 157

Query: 157 QGMLGGQMLDIQD---EFIDETQVFMIQKM---KTGALMCFACESG 196
            GM+ GQ+ D+Q+   +  D T  +++  +   KT AL+ +A + G
Sbjct: 158 NGMVIGQIHDMQNHGHQKSDVTYDWLLNDVYAPKTAALISYATDIG 203


>gi|86134740|ref|ZP_01053322.1| polyprenyl synthetase [Polaribacter sp. MED152]
 gi|85821603|gb|EAQ42750.1| polyprenyl synthetase [Polaribacter sp. MED152]
          Length = 323

 Score =  104 bits (260), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 14/210 (6%)

Query: 25  LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L++   +Q   N  L   + Y L LGGK+IR  L    A +F  ++  AL    A+E  H
Sbjct: 14  LESKDWVQEPKN--LYEPVDYILKLGGKRIRPVLTLMAADIFGADYNKALPAALAVEVFH 71

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            ++L+HDD+  MD+  +RRGK TVH ++D  TAI++G+ +L  A++   + K ++     
Sbjct: 72  NFTLVHDDI--MDDAPLRRGKATVHEKWDINTAILSGDAMLILAYKYFENYKPEV----- 124

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMA 200
            Q +  L     L+ +  GQ LD+  E   +  +     M   KT  L+  A + GAI+A
Sbjct: 125 FQKLAKLFSKTALE-VCDGQQLDVDFETRKKVTIDEYLNMICLKTSVLVAAALKMGAIVA 183

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +     + +  FG NLG+ FQL DD LD 
Sbjct: 184 ESDDKNADLIYDFGLNLGLAFQLQDDYLDT 213


>gi|260174038|ref|ZP_05760450.1| putative isoprenyl synthetase [Bacteroides sp. D2]
 gi|315922307|ref|ZP_07918547.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696182|gb|EFS33017.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 324

 Score =  104 bits (260), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L+    +L+  +  +      AIE  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPTVH  +++ TA+++G+ +L  AF  ++  P   LK+ +    + SLT     
Sbjct: 85  SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMD---LFSLT----T 137

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A A+  + E L  F
Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G+ FQL DDLLD   D
Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217


>gi|4490594|emb|CAB38744.1| geranylgeranyl pyrophosphate synthase [Rhodobacter sphaeroides]
          Length = 288

 Score =  104 bits (260), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 13/202 (6%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89
           ++   +L +A+ YA+  GG +IR  L+   A+    +   AL   AA+  E IHC SL+H
Sbjct: 21  SEAPSKLATALDYAVTPGGARIRPTLLLSVATRCG-DSRPALSDAAAVALELIHCASLVH 79

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++      +     QL+ +
Sbjct: 80  DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLAGAAAD-RPQRALQLVTA 138

Query: 150 LTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           L    G+  G+  GQ  + + +      +    + KTGAL   A + GAI   A+  E E
Sbjct: 139 LAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEAE 191

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
                G  +G  FQ+ADDL D 
Sbjct: 192 PWEELGARIGEAFQVADDLRDA 213


>gi|237720117|ref|ZP_04550598.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450669|gb|EEO56460.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 324

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L+    +L+  +  +      AIE  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPTVH  +++ TA+++G+ +L  AF  ++  P   LK+ +    + SLT     
Sbjct: 85  SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMD---LFSLT----T 137

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A A+  + E L  F
Sbjct: 138 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G+ FQL DDLLD   D
Sbjct: 198 GMHIGVAFQLQDDLLDVYGD 217


>gi|317132180|ref|YP_004091494.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470159|gb|ADU26763.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 296

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 126/233 (54%), Gaps = 22/233 (9%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           ++++ +KR++  L+  L  TA   Q     RL  A+RY A+ GGK++R  LV E   +  
Sbjct: 6   RIEDIAKRVNEALNRFL-PTAEGPQ----KRLFEAMRYSAMAGGKRVRPMLVLEFCRMCG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                AL    A+E IH YSLIHDDLP MD+   RRG+P+ H+QYDE TA++AG+ LL+ 
Sbjct: 61  GKEEQALPFACAVEMIHTYSLIHDDLPCMDDDDFRRGRPSCHVQYDEATALLAGDALLSL 120

Query: 127 AFEIISSPKTQLKDNIRSQLML-SLTHNIGLQGMLGGQMLDIQDEFID---ETQ------ 176
           AFE      T L +N++S ++  +    +GL     G    +  + ID   E Q      
Sbjct: 121 AFE------TGLCNNMQSGVLAQNALRAMGLLAKASGGQGMVGGQMIDLLSEGQHIPLEL 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  + + KTGA++  A   G I+A A +   +    +   LG+ FQ+ DD+LD
Sbjct: 175 LETMHRGKTGAMIRAAAAGGCILAGADETRVQAADAYAAKLGLAFQIVDDILD 227


>gi|157150564|ref|YP_001449997.1| geranyltranstransferase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075358|gb|ABV10041.1| geranyltranstransferase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 291

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 12/225 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E  ++ID  + D   Q A       +D L+ +I Y++  GGK+IR  L+ E    F++ 
Sbjct: 4   EEKIRQIDQTIIDYYSQQAV------SDSLVESILYSVQAGGKRIRPLLLLELVEAFDLP 57

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  LQPAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             +I+    +L    +  L++ L+   G  GM+GGQ LD++ E   +D  ++  I   KT
Sbjct: 118 CGLIAV--AELPSQAKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELKAIHAHKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           G L+ F   +  ++A   +  + +LR  GE +G+ FQ+ DD+LD 
Sbjct: 176 GKLLAFPFVAAGLLAQVDEGVQAKLRRIGELIGLAFQVRDDILDV 220


>gi|283850298|ref|ZP_06367587.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B]
 gi|283574324|gb|EFC22295.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B]
          Length = 299

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 112/197 (56%), Gaps = 4/197 (2%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + LL+A+ Y+LL GGK++R  L    A LF      A+   A  E IH YSLIHDDLP+M
Sbjct: 33  ESLLAAMEYSLLAGGKRLRPALCLSFAELFGAARARAMPFAAGFEIIHTYSLIHDDLPAM 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG+P+ H  + E  AI+AG+GLLT AF  +      +  ++    +       G
Sbjct: 93  DDDDLRRGRPSNHKVFGEAAAILAGDGLLTEAFGCMGRAWPGIAADLVLPALAEAARAAG 152

Query: 156 LQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             GM GGQ LD+     + +   ++  +Q +KTGAL+  +C  GAI+A A +    R R 
Sbjct: 153 AAGMGGGQALDMDYTARQGVTLAELARMQALKTGALITASCVCGAILAGAGEEGVARARE 212

Query: 213 FGENLGIIFQLADDLLD 229
           +GE +G  FQ+ DD+LD
Sbjct: 213 YGEAVGAAFQIVDDILD 229


>gi|221639691|ref|YP_002525953.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
           sphaeroides KD131]
 gi|332558710|ref|ZP_08413032.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
           sphaeroides WS8N]
 gi|221160472|gb|ACM01452.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
           sphaeroides KD131]
 gi|332276422|gb|EGJ21737.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
           sphaeroides WS8N]
          Length = 278

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 15/202 (7%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89
           ++   +L +A+ YA+  GG +IR  L+   A+    +   AL   AA+  E IHC SL+H
Sbjct: 11  SEAPSKLATALDYAVTPGGARIRPTLLLSVATACG-DDRPALSDAAAVALELIHCASLVH 69

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148
           DDLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++  +       R+ QL+ 
Sbjct: 70  DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLA--RAAADQPQRALQLVT 127

Query: 149 SLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +L    G+  G+  GQ  + + +      +    + KTGAL   A + GAI   A+  E 
Sbjct: 128 ALAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEA 180

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           E     G  +G  FQ+ADDL D
Sbjct: 181 EPWEELGARIGEAFQVADDLRD 202


>gi|225432262|ref|XP_002275812.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 361

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 6/194 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK+I   +      L      TA+ V  A+E +H  SL+ DDLP MDN  I
Sbjct: 98  AMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDI 157

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQG 158
           RRGKP+ H  + E   I+A + LL  AFE +++  T   +   +    +  L  +IG QG
Sbjct: 158 RRGKPSNHKAFGESVTILAVDALLALAFEHVATMSTVGVVPPMVTVHAIQELARSIGSQG 217

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           ++ GQ LD+  E   E  +  ++ +   K G L+  +   GA++   S  + E LR FG 
Sbjct: 218 LVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGR 277

Query: 216 NLGIIFQLADDLLD 229
            +G+++Q+ DD+LD
Sbjct: 278 CVGLLYQVVDDILD 291


>gi|62959215|gb|AAY23715.1| farnesyl diphosphate synthase [Synechococcus sp. WH 6501]
          Length = 145

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRG+PT HI +DE TAI+AG+ L T AF  ++     L D +R  ++ 
Sbjct: 1   HDDMPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLAEAPG-LDDQVRLAMVR 59

Query: 149 SLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQN 205
            L    G QGM GGQ +D++   + +   Q+  + + KTGAL+  +   GA+ A   +++
Sbjct: 60  ELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATEVNED 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           +   L  + + LG+ FQ+ DD+LD E
Sbjct: 120 QLAALTVYSQTLGLAFQVQDDILDVE 145


>gi|126462671|ref|YP_001043785.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104335|gb|ABN77013.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029]
          Length = 292

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 15/203 (7%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89
           ++   +L +A+ YA+  GG +IR  L+   A+    +   AL   AA+  E IHC SL+H
Sbjct: 25  SEAPSKLATALDYAVTPGGARIRPTLLLSVATACG-DDRPALSDAAAVALELIHCASLVH 83

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148
           DDLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++  +       R+ QL+ 
Sbjct: 84  DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLA--RAAADQPQRALQLVT 141

Query: 149 SLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +L    G+  G+  GQ  + + +      +    + KTGAL   A + GAI   A+  E 
Sbjct: 142 ALAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEA 194

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           E     G  +G  FQ+ADDL D 
Sbjct: 195 EPWEELGARIGEAFQVADDLRDA 217


>gi|77463836|ref|YP_353340.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
 gi|85683255|sp|P54976|CRTE_RHOS4 RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; AltName: Full=Farnesyltranstransferase
 gi|77388254|gb|ABA79439.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 288

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 15/203 (7%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89
           ++   +L +A+ YA+  GG +IR  L+   A+    +   AL   AA+  E IHC SL+H
Sbjct: 21  SEAPSKLATALDYAVTPGGARIRPTLLLSVATACG-DDRPALSDAAAVALELIHCASLVH 79

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148
           DDLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++  +       R+ QL+ 
Sbjct: 80  DDLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLA--RAAADQPQRALQLVT 137

Query: 149 SLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +L    G+  G+  GQ  + + +      +    + KTGAL   A + GAI   A+  E 
Sbjct: 138 ALAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEA 190

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           E     G  +G  FQ+ADDL D 
Sbjct: 191 EPWEELGARIGEAFQVADDLRDA 213


>gi|146278076|ref|YP_001168235.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556317|gb|ABP70930.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025]
          Length = 288

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 25/212 (11%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIH 89
           ++   +L SA+ YA+  GG +IR  L+   A+    +   AL   AA+  E IHC SL+H
Sbjct: 21  SEAPSKLASALDYAVTPGGARIRPTLLLSVATACG-DDRPALSDAAAVALELIHCASLVH 79

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRS 144
           DDLP  D+  IRRGKPT H  Y E  AI+ G+ L+   FE+++      P+  L      
Sbjct: 80  DDLPCFDDAEIRRGKPTTHRAYSEPLAILTGDSLIVMGFEVLARAAGDQPQRAL------ 133

Query: 145 QLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           QL+ +L    G+  G+  GQ  + + +      +    + KTGAL   A + GAI   A+
Sbjct: 134 QLVTALAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AA 186

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD--CEED 233
             E E     G  +G  FQ+ADDL D  C+ D
Sbjct: 187 GYEAEPWEELGARIGEAFQVADDLRDALCDAD 218


>gi|160882687|ref|ZP_02063690.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483]
 gi|299147995|ref|ZP_07041058.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
 gi|156111857|gb|EDO13602.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483]
 gi|298514178|gb|EFI38064.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
          Length = 342

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L+    +L+  +  +      AIE  H ++L+HDDL  MD 
Sbjct: 45  LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 102

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPTVH  +++ TA+++G+ +L  AF  ++  P   LK+ +    + SLT     
Sbjct: 103 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMD---LFSLT----T 155

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A A+  + E L  F
Sbjct: 156 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNF 215

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G+ FQL DDLLD   D
Sbjct: 216 GMHIGVAFQLQDDLLDVYGD 235


>gi|150010302|ref|YP_001305045.1| putative isoprenoid biosynthesis related protein [Parabacteroides
           distasonis ATCC 8503]
 gi|255012432|ref|ZP_05284558.1| putative isoprenoid biosynthesis related protein [Bacteroides sp.
           2_1_7]
 gi|298374699|ref|ZP_06984657.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
 gi|149938726|gb|ABR45423.1| putative isoprenoid biosynthesis related protein [Parabacteroides
           distasonis ATCC 8503]
 gi|298269067|gb|EFI10722.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
          Length = 324

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L     +++N +   A++    +E  H ++L+HDDL  MD 
Sbjct: 27  LYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIKPALGLEVFHNFTLLHDDL--MDE 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGL 156
              RR KPTVH  ++  TAI++G+ +L  A+++I S +   LK     Q++   T     
Sbjct: 85  ADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGSTEHGHLK-----QVLDLFTQTAA- 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             + GGQ  D++ E    + E +   + ++KT  L+  + ++GA++  ASQ +   L  F
Sbjct: 139 -EICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLACSLKTGALLGGASQEDAGNLYAF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GINIGLAFQLQDDLLDVYGD 217


>gi|325977772|ref|YP_004287488.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177700|emb|CBZ47744.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 289

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95
           L+ AI Y++  GGK+IR  +  E    F +  LT     V AA+E IH  SLIHDDLP+M
Sbjct: 25  LIEAILYSVEAGGKRIRPLIFLEILEGFGI-ELTEGHFDVAAALEMIHTGSLIHDDLPAM 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRG+ T H ++DE TAI+AG+ L    F ++++    L  + + +L+  L+   G
Sbjct: 84  DDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFGLVAN--AALSADTKVRLIAELSQASG 141

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+GGQMLD++ E   ++ +++ +I   KTG L+ F   +  I+A+ + ++ + LR  
Sbjct: 142 TYGMVGGQMLDMKGEERKLNLSELQLIHANKTGKLLTFPVVAAGIVANLAADDLKSLREA 201

Query: 214 GENLGIIFQLADDLLDC 230
           G  +G+ FQ+ DD+LD 
Sbjct: 202 GSLVGLAFQVRDDILDV 218


>gi|293373955|ref|ZP_06620297.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
 gi|292631176|gb|EFF49812.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
          Length = 342

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L+    +L+  +  +      AIE  H ++L+HDDL  MD 
Sbjct: 45  LYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPATAIEVYHNHTLLHDDL--MDR 102

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPTVH  +++ TA+++G+ +L  AF  ++  P   LK+ +    + SLT     
Sbjct: 103 SDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPPEHLKEVMD---LFSLT----T 155

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A A+  + E L  F
Sbjct: 156 LEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSLKIGAILAGATAEDAENLYNF 215

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G+ FQL DDLLD   D
Sbjct: 216 GMHIGVAFQLQDDLLDVYGD 235


>gi|313148980|ref|ZP_07811173.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137747|gb|EFR55107.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 324

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 112/199 (56%), Gaps = 12/199 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   ++Y L +GGK+IR  L+    +L+  +  +      AIE  H Y+L+HDDL  MD 
Sbjct: 27  LYDPVKYVLSMGGKRIRPVLMLMAYNLYKEDVTSVYDPATAIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGK TVH  +++ TAI++G+ ++  A++ ++S  ++    +    + SLT    L+
Sbjct: 85  ADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCSSEYLKEVMD--LFSLT---ALE 139

Query: 158 GMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
              G QM    + +D+  +E  + MI ++KT  L+  + + GAI+  AS+ + E L  FG
Sbjct: 140 ICEGQQMDMGFESRDDVKEEEYLEMI-RLKTAVLLAASLKIGAILGGASREDAENLYDFG 198

Query: 215 ENLGIIFQLADDLLDCEED 233
             +G+ FQL DDLLD   D
Sbjct: 199 MQIGVAFQLQDDLLDVYGD 217


>gi|330834019|ref|YP_004408747.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
 gi|329566158|gb|AEB94263.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
          Length = 327

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 8/199 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A RY L  GGK++R  +V   + L   +   A+  GAAIE +H ++LIHDD+  MD 
Sbjct: 29  LYEASRYLLKAGGKRLRPLMVVLSSELLGGSRDRAILAGAAIEVLHNFTLIHDDI--MDQ 86

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG PTVH+++   TAI+AG+ L   AFE+I+     L  ++  + +   + +I + 
Sbjct: 87  DTTRRGLPTVHVKWGIPTAILAGDLLHAKAFELITESIKGLPIDLAYRALNCFSRSIVI- 145

Query: 158 GMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACES--GAIMAHASQNEKERLRCFG 214
            +  GQ +D++ +   D T+   ++ ++      FAC +  G ++A+ +  E   L  FG
Sbjct: 146 -VSEGQAMDMEFERRWDVTENLYLEMIRKKTAQLFACSAHLGGLLANGTNEEVNSLYDFG 204

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +GI FQ+ DD+L    D
Sbjct: 205 EKIGIAFQIMDDILGITAD 223


>gi|149369615|ref|ZP_01889467.1| putative isoprenoid biosynthesis related protein [unidentified
           eubacterium SCB49]
 gi|149357042|gb|EDM45597.1| putative isoprenoid biosynthesis related protein [unidentified
           eubacterium SCB49]
          Length = 324

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 11/186 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           LGGK++R  L    A  F      A+    A+E  H +SLIHDD+  MD+  +RRGK TV
Sbjct: 37  LGGKRLRPVLTLMTAEFFGSTIEKAMNAALAVELFHNFSLIHDDI--MDDAPLRRGKVTV 94

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++D  T I++G+ +L  A+++    + +     + Q +  L     L+ +  GQ  D+
Sbjct: 95  HEKWDLNTGILSGDAMLILAYQLFEGYEAE-----KFQQLAKLFSKTALE-VCEGQQYDV 148

Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             E  D+  +    KM   KT  L+  A + GAI+A AS   K+ +  FG NLGI FQL 
Sbjct: 149 DFETRDDVTIPEYIKMIDFKTAVLIGAAMKMGAIVAEASDACKDNIYEFGRNLGIAFQLQ 208

Query: 225 DDLLDC 230
           DD LD 
Sbjct: 209 DDYLDA 214


>gi|260461762|ref|ZP_05810008.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
 gi|319785307|ref|YP_004144783.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|259032403|gb|EEW33668.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
 gi|317171195|gb|ADV14733.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 332

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 18/223 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q+ +K ++  L  LL       +      L++A+RYA L GGK+ R+ L     +L + 
Sbjct: 37  MQDGAKGVEQALARLLCA-----EDDGETELMAAMRYATLHGGKRTRALLCLAAGALADT 91

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  VGAAIE IH  +L+HDDLP+MDN  +RRG PTVH+++ E TAI+ G+ L  +A
Sbjct: 92  PAHVLEDVGAAIEMIHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAHA 151

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185
           F  ++S      DN R  L+  L   +  +G  GGQ  D+    + ++  ++  + +MK+
Sbjct: 152 FLTLASLDAP-GDN-RIALVRELAQAVSAEGAAGGQAKDLSLVGKHVELDRIVAMHRMKS 209

Query: 186 GALMCFACESGAI------MAHAS-QNEKERLR-CFGENLGII 220
           GAL+  +   GA+       AHA+  +  +R   CFG  L ++
Sbjct: 210 GALVRASVRMGALCAITEDAAHAALYSALDRYSACFGLALQVV 252


>gi|27362941|gb|AAN86974.1| multifunctional geranylgeranyl pyrophosphate synthase [Sulfolobus
           shibatae B12]
          Length = 331

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68
           S  + +  +D++     H++   + N R L    + L   GGK++R  ++   + L   +
Sbjct: 2   SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG+ L   AF
Sbjct: 62  RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187
           E ++     L  N   +      ++I +  +  GQ +D+  E  +D T+   +Q +K   
Sbjct: 120 EALNEALKGLDGNTFYKAFSVFINSIEI--ISEGQAMDMSFENRVDVTEEEYMQMIKGKT 177

Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            M F+C +  G I+  AS +  + L  +G NLGI FQ+ DD+L
Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDIL 220


>gi|20089495|ref|NP_615570.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanosarcina acetivorans C2A]
 gi|19914402|gb|AAM04050.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanosarcina acetivorans C2A]
          Length = 324

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 19/230 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  ++++ S  +D  +++LL  T       H + L  A RY +  GGK++R  ++   A 
Sbjct: 6   LIDEIKKRSSHVDAAINELLPVT-------HPEELYKASRYLVDAGGKRLRPAVLILAAE 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +  + L    A+E +H ++LIHDD+   DN  IRRG P VH+++ E  AI+AG+ L
Sbjct: 59  AVGSDLKSVLPAAVAVELVHNFTLIHDDIMDKDN--IRRGMPAVHVKWGEAGAILAGDTL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFM 179
            + AFEI+S  +      ++   +LS T       +  GQ LD+    +D   +   + M
Sbjct: 117 YSKAFEILSKVENDPVRILKCMDVLSKT----CTEICEGQWLDMDFEKRDRVTELEYLEM 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++K KT  L   A + GA++  AS    E L  +G  +GI FQ+ DD+LD
Sbjct: 173 VEK-KTSVLYAAAAKIGALLGGASDEVAESLSEYGRLIGIGFQMYDDVLD 221


>gi|92112233|ref|YP_572161.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM
           3043]
 gi|91795323|gb|ABE57462.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM
           3043]
          Length = 285

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 10/198 (5%)

Query: 41  SAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +A+RY++LGG K++R  LV                  AA+E IH YSL+HDDLP+MD+  
Sbjct: 28  AAMRYSVLGGGKRLRPILVYAAGHALGAEDKALDAPAAAVELIHAYSLVHDDLPAMDDDD 87

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQG 158
           +RRG+PTVH  Y E  AI+AG+ L T AFE+++  +  +L   +R     +L +  G +G
Sbjct: 88  MRRGRPTVHRAYSEAMAILAGDALQTLAFEVLAETRHPRLGAMVR-----ALANASGREG 142

Query: 159 MLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGE 215
           M  GQ LD+      +D   +  +   KTGAL+  A   GA+ A    + +   L  +  
Sbjct: 143 MAAGQALDLSAVGGRLDVDALATMHGYKTGALIRAAVRLGALAAADEDDPRVAALDTYAA 202

Query: 216 NLGIIFQLADDLLDCEED 233
            +G+ FQ+ DD+LD   D
Sbjct: 203 AIGLAFQIQDDILDVAGD 220


>gi|53804815|ref|YP_113317.1| geranyltranstransferase [Methylococcus capsulatus str. Bath]
 gi|53758576|gb|AAU92867.1| geranyltranstransferase [Methylococcus capsulatus str. Bath]
          Length = 300

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 123/230 (53%), Gaps = 10/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           ++ + +R++  LD   L  A  M     +RL  A+RY++LGG K++R  L         V
Sbjct: 11  MRSSQERVERALD-ARLPAADRMP----ERLHQAMRYSVLGGGKRMRPLLTYATGQTIGV 65

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                     A+E IH YSLIHDDLP+MD+  +RRGKPT H  YDE TAI+AG+GL   A
Sbjct: 66  AADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDEATAILAGDGLQALA 125

Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMK 184
           F +++  P   +    R  ++ +L    G  GM+GGQ +D+    + +D   +  +   K
Sbjct: 126 FHVLAQDPSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLASVGKKLDLPGLENMHIRK 185

Query: 185 TGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+  +     +       E+ +RL  + + +G+ FQ+ DD+LD E D
Sbjct: 186 TGALIRASVRLACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEESD 235


>gi|50952782|gb|AAT90315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured
           proteobacterium eBACred25D05]
          Length = 308

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 111/202 (54%), Gaps = 15/202 (7%)

Query: 38  RLLSAIRYALL-GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L  AI+Y++  GG +IR + L++   +  + N   A    AA+E IHC SL+HDDLP  
Sbjct: 45  KLDDAIQYSVFPGGARIRPTILLSVAVACGDDNPSLANASAAALEMIHCASLVHDDLPCF 104

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNI 154
           DN   RRGKP+VH +Y E TA++ G+ L+  AF +I+  +   KD +R ++L+  L+   
Sbjct: 105 DNAETRRGKPSVHNKYGEPTAVLVGDSLIANAFGVIA--RAADKDAVRAAKLIALLSKYT 162

Query: 155 GL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           G  +G+  GQ  + +        +    + KTGAL   A + GA  A    ++ E     
Sbjct: 163 GFPKGICAGQAWEAE----ISVDLSAYHQTKTGALFIAATQMGAASA---GHDPEPWFEL 215

Query: 214 GENLGIIFQLADDLLD--CEED 233
           G  +G  FQ+ADDLLD  C ED
Sbjct: 216 GARIGEAFQVADDLLDVLCSED 237


>gi|326790848|ref|YP_004308669.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
 gi|326541612|gb|ADZ83471.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
          Length = 291

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 10/199 (5%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVT-ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L  A+ Y+LL GGK+IR  L+     ++     + A   G  IE IH YSLIHDDLP+
Sbjct: 28  ENLYKAMNYSLLAGGKRIRPVLMQLAYEAVGGKAEIDAYLCG--IEMIHTYSLIHDDLPA 85

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTH 152
           MD+   RRGK T H  + E TAI+AG+ LL  AF ++   + K+   + +R+  +LS+  
Sbjct: 86  MDDDDYRRGKLTNHKVFGEATAILAGDALLNDAFCLMLEDALKSDSMEKVRAIHVLSMAS 145

Query: 153 NIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G  GM+GGQ+LD++ E   ID+  + +I   KTGAL+  A + GAI+   S  E   L
Sbjct: 146 --GSAGMIGGQILDMESENKAIDQDTLDLIHLNKTGALISAATKMGAILGGGSPREVSLL 203

Query: 211 RCFGENLGIIFQLADDLLD 229
             +G+ +G +FQ+ DD+LD
Sbjct: 204 EAYGKYIGKVFQIVDDILD 222


>gi|282882106|ref|ZP_06290747.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B]
 gi|281298136|gb|EFA90591.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B]
          Length = 289

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 13/236 (5%)

Query: 11  ENSKRIDTI---LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL--VTECASL 64
           +N + ++TI   LD  L  T +++  +   ++  +++Y+L  GGK+IR  L  +T     
Sbjct: 2   KNLEELNTIIGELDSYLSNTFTYVD-ESLAKIYESMKYSLFSGGKRIRPLLCMITYNELA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            N      L   A +E IH YSLIHDDLP+MD+  +RR KPT H  Y E  AI+AG+GLL
Sbjct: 61  ENPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLL 120

Query: 125 TYAFEIISSPKTQLK--DNIRSQL-MLSLTHNI-GLQGMLGGQMLDIQ--DEFIDETQVF 178
             + E+IS     L   D ++  +  L   +N  G+ GM+GGQ+LDI   +E  +E    
Sbjct: 121 NMSMEVISKYMESLDDIDELKKCIKALKFIYNCSGVLGMIGGQLLDIDYLNEQYNEELCE 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            +  +KT AL+  +  +GAIMA        +L+ FG+ +G+ +Q  DDLLD  +DL
Sbjct: 181 DMYSLKTAALLKASIVTGAIMAGCEGEIITKLKEFGQYIGLAYQYKDDLLDMNKDL 236


>gi|225868943|ref|YP_002744891.1| geranyltranstransferase [Streptococcus equi subsp. zooepidemicus]
 gi|225702219|emb|CAW99956.1| putative geranyltranstransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 289

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 106/208 (50%), Gaps = 13/208 (6%)

Query: 34  QHNDR-------LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHC 84
           Q+ DR       L  AI Y++ GG K    L+           LT     + AAIE IH 
Sbjct: 13  QYYDRQSTVSADLEEAILYSVDGGGKRLRPLILLELLEGFGLALTDAHYAIAAAIEMIHT 72

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SLIHDDLP+MDN   RRG+ T H Q+DE TAI+AG+ L    F +I+     L  ++  
Sbjct: 73  GSLIHDDLPAMDNDDYRRGRLTSHKQFDEATAILAGDSLFLDPFALIAG--ADLPADLLV 130

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           QL+   +   G  GM+GGQ+LD++ E   +D  ++  I   KTG L+     +  I+A  
Sbjct: 131 QLIQQFSLASGTFGMVGGQLLDMKGEQQLLDIQELSDIHANKTGKLLTLPFVAAGIIAEQ 190

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
           S +    L   G  +G  FQ+ DD+LD 
Sbjct: 191 SADVLSCLWEAGRLVGQAFQIRDDILDV 218


>gi|6690726|gb|AAF24294.1| CrtE [Rhodobacter sphaeroides]
          Length = 288

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 13/202 (6%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHD 90
           ++   +L +A+ YA+  GG +IR  L+   A+    +        A A+E IHC SL+HD
Sbjct: 21  SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPVLSDAAAVALELIHCASLVHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
           DLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++  +       R+ QL+ +
Sbjct: 81  DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLA--RAAADQPQRALQLVTA 138

Query: 150 LTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           L    G+  G+  GQ  + + +      +    + KTGAL   A + GAI   A+  E E
Sbjct: 139 LAVRTGMPMGICAGQGWESESQI----NLSAYHRAKTGALFIAATQMGAI---AAGYEAE 191

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
                G  +G  FQ+ADDL D 
Sbjct: 192 PWEELGARIGEAFQVADDLRDA 213


>gi|312963291|ref|ZP_07777774.1| geranyltranstransferase [Pseudomonas fluorescens WH6]
 gi|311282371|gb|EFQ60969.1| geranyltranstransferase [Pseudomonas fluorescens WH6]
          Length = 295

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 125/227 (55%), Gaps = 10/227 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           +  R++  L+ L +  +  M+     RL  A+RY+++ GGK++R  L             
Sbjct: 9   SQARVNAALEPLFVAPSPQMK-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGAPAE 63

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  
Sbjct: 64  QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGLQSLAFSA 123

Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +  P  + +   IR +++ +L    G  GM+GGQ +D+      +D+  +  + + KTGA
Sbjct: 124 LLDPGLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDMGSVSLKLDQQALEHMHRHKTGA 183

Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  A + GA+ +  A   +   L+ +   +G+ FQ+ DD+LD E D
Sbjct: 184 LIEAAVQLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESD 230


>gi|213962451|ref|ZP_03390713.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
 gi|213954777|gb|EEB66097.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
          Length = 322

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 20/200 (10%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   +RY L LGGK++R  L      LF+ ++  AL    AIE  H +SL+HDD+  MD 
Sbjct: 27  LYEPMRYILQLGGKRLRPILTLIATDLFDADYHKALNAAMAIEMFHNFSLVHDDI--MDK 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+ TVH +++   AI++G+ +L  A+        QL D+  S +   LT  +   
Sbjct: 85  ASLRRGETTVHKKWNTNIAILSGDAMLVKAY--------QLLDDYPSDVFSLLTKILSRT 136

Query: 158 GML--GGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +    GQ  D+  +F  +T+V       + + KT  L+  A + G I+A+AS   +  +
Sbjct: 137 ALKVCEGQQWDM--DFETQTEVSIPDYLQMIRYKTAVLIGAALQMGVIIANASPENQMPI 194

Query: 211 RCFGENLGIIFQLADDLLDC 230
             FGE LG+ FQL DD LD 
Sbjct: 195 YTFGEELGLAFQLQDDYLDA 214


>gi|189184004|ref|YP_001937789.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda]
 gi|189180775|dbj|BAG40555.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda]
          Length = 338

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    + LFN + L+   + AA+E IH  +L+HDD+  +D   +RR  PTVH
Sbjct: 54  GGKRIRPMLTIIISKLFNYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVH 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +++D  T+I+ G+ L + +F+++      +K N IR+    SL+ N  + G +  Q+  +
Sbjct: 112 LKWDTKTSILIGDFLFSQSFKLM------IKSNSIRALKSFSLSFNTIITGEVK-QLTQL 164

Query: 168 QDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++  I E + F + + KT  L   +CE  AI+++ S      ++ FG  LG+IFQ+ DD
Sbjct: 165 HNQKIITEDEYFRVIQAKTAELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDD 224

Query: 227 LLD 229
           +LD
Sbjct: 225 ILD 227


>gi|148284169|ref|YP_001248259.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str.
           Boryong]
 gi|146739608|emb|CAM79381.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str.
           Boryong]
          Length = 338

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    + LFN + L+   + AA+E IH  +L+HDD+  +D   +RR  PTVH
Sbjct: 54  GGKRIRPMLTIIISKLFNYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVH 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +++D  T+I+ G+ L + +F+++      +K N IR+    SL+ N  + G +  Q+  +
Sbjct: 112 LKWDTKTSILIGDFLFSQSFKLM------IKSNSIRALKSFSLSFNTIITGEVK-QLTQL 164

Query: 168 QDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++  I E + F + + KT  L   +CE  AI+++ S      ++ FG  LG+IFQ+ DD
Sbjct: 165 HNQKIITEDEYFRVIQAKTAELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDD 224

Query: 227 LLD 229
           +LD
Sbjct: 225 ILD 227


>gi|260899213|ref|ZP_05907608.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037]
 gi|308106680|gb|EFO44220.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037]
          Length = 234

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 4/162 (2%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SP 134
            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ G+ L T AF II+  P
Sbjct: 8   ASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAFTIIADGP 67

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFA 192
            +   +N R  ++ +L H+ G  GM  GQ LD+  ++  +   ++  I + KTGAL+  A
Sbjct: 68  LSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAEMEEIHRKKTGALIDCA 127

Query: 193 CESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
            + GA+ A     E    L  + + +G+ FQ+ DD+LD   D
Sbjct: 128 VKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISD 169


>gi|306825094|ref|ZP_07458436.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432530|gb|EFM35504.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 291

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 128/229 (55%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLF 65
           K QE    +++ L+D       +   Q    L  A+ Y++  GGK+IR FL+ E   SL 
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLQ 55

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V      +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VVIRPAYAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L + I+  L+++L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPNQIKVDLIVNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
          Length = 367

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 6/194 (3%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L       ++    A+E IH  SLIHDDLP      +
Sbjct: 104 AMRYSLLAGGKRVRPILCIAACELVGGEESNSVPAACAVEMIHTMSLIHDDLPCYGQRDL 163

Query: 101 RRGKPTVHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRGK     +   E  A++AG+ LL ++FE I++    +           ++ +IG +G+
Sbjct: 164 RRGKAHETTKSSCEDVAVLAGDSLLAFSFEYIATATKNVSPAKNFSRSRRISKSIGTEGL 223

Query: 160 LGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ+ D     +++     Q+  I   KT AL+  A   GAI+   +  E E+LR F  
Sbjct: 224 VAGQVADFVINGENQMFGLDQLEFIHIHKTAALLEAAVVLGAILGGGNPEEVEKLRRFAR 283

Query: 216 NLGIIFQLADDLLD 229
            +G++FQ+ DD+LD
Sbjct: 284 CIGLLFQVVDDILD 297


>gi|118576797|ref|YP_876540.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
           [Cenarchaeum symbiosum A]
 gi|118195318|gb|ABK78236.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
           [Cenarchaeum symbiosum A]
          Length = 321

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 97/194 (50%), Gaps = 15/194 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R +++ +           A+    AIE IH ++L+HDD+  MDN  IR G PTVH
Sbjct: 35  GGKRFRPYMLIKSCQALGGKKSDAMPAATAIEMIHNFTLLHDDI--MDNDSIRHGVPTVH 92

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGG 162
            ++    AI+AG+ L + A+++IS P+   K   R    L+       +G      M  G
Sbjct: 93  KKFGVPVAILAGDVLFSKAYQVISGPRVPEKRAARLTSRLAAACVDVCEGQLYDMDMAEG 152

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             L  + E+I      MI K KT +L   AC  GAI + A + +  R   FG  LG+ FQ
Sbjct: 153 AKLPTRSEYI-----MMIGK-KTASLFGAACAMGAICSGADEKDARRFAAFGTGLGVAFQ 206

Query: 223 LADDLLDCEEDLPK 236
           + DDL+    D PK
Sbjct: 207 ITDDLIGITGD-PK 219


>gi|239907069|ref|YP_002953810.1| geranyltranstransferase [Desulfovibrio magneticus RS-1]
 gi|239796935|dbj|BAH75924.1| geranyltranstransferase [Desulfovibrio magneticus RS-1]
          Length = 299

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 118/201 (58%), Gaps = 12/201 (5%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + LL+A+ Y+LL GGK++R  L    A LF+ +    +   A  E IH YSLIHDDLP+M
Sbjct: 33  ENLLAAMEYSLLAGGKRLRPVLCLVFAELFDADRARVMPFAAGFEIIHTYSLIHDDLPAM 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS----LT 151
           D+  +RRG+P+ H  + E  AI+AG+ LLT AF  +     ++   + ++L+L       
Sbjct: 93  DDDDLRRGRPSNHKVFGEAGAILAGDALLTEAFGCMG----RVWPGVAAELVLPALAEAA 148

Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
              G  GM+GGQ+LD+     E +   ++  +Q +KTGAL+  +C  GAI+A A +    
Sbjct: 149 KAAGAAGMVGGQVLDMDYTAREGVTLAELARMQALKTGALLTASCVCGAILAGAGEEGVA 208

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           R R +GE +G  FQ+ DD+LD
Sbjct: 209 RAREYGEAVGAAFQIVDDILD 229


>gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 295

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 124/227 (54%), Gaps = 10/227 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           +  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L             
Sbjct: 9   SQARVNAALETLFSAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAE 63

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A     A+E IH YSL+HDDLP+MD+  +RRG+PT H Q+DE  AI+AG+GL + AF  
Sbjct: 64  QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFTA 123

Query: 131 ISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +  P  +     +R  ++ +L    G  GM+GGQ +D+      +D++ +  + + KTGA
Sbjct: 124 LLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKTGA 183

Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  +   GA+ +  A+  + + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 184 LIEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESD 230


>gi|70605942|ref|YP_254812.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
           DSM 639]
 gi|729570|sp|P39464|GGPS_SULAC RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase
 gi|506371|dbj|BAA43200.1| geranylgeranyl diphosphate synthase [Sulfolobus acidocaldarius]
 gi|68566590|gb|AAY79519.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
           DSM 639]
          Length = 330

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 101/188 (53%), Gaps = 7/188 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++T  + LF      A   GAAIE +H ++L+HDD+   DN  IRRG PTVH
Sbjct: 41  GGKRLRPLILTISSDLFGGQRERAYYAGAAIEVLHTFTLVHDDIMDQDN--IRRGLPTVH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++Y    AI+AG+ L   AF++++     L      +     T +I +  +  GQ +D++
Sbjct: 99  VKYGLPLAILAGDLLHAKAFQLLTQALRGLPSETIIKAFDIFTRSIII--ISEGQAVDME 156

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    I E +   +   KT AL   +   GA++A A+ N+   +  FG NLGI FQ+ D
Sbjct: 157 FEDRIDIKEQEYLDMISRKTAALFSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVD 216

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 217 DILGLTAD 224


>gi|300811648|ref|ZP_07092124.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497349|gb|EFK32395.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 287

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 17/233 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASL 64
           +  +E   +   I++D L      +  + +D R    + Y+++ GGK++R  L       
Sbjct: 2   TTFKEFQAKYTPIINDFL---EGQLAKESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDA 58

Query: 65  FNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             V  +T   V AA  IE IH YSLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ 
Sbjct: 59  LGV-EITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179
           L     + I+  +   K      L+  +T  +G +GM+ GQ LDI    +E   E  +  
Sbjct: 118 LQPLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDH 171

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ +KTG L+  + +    +A     + ++   F ++ G  +QL DDL+D  E
Sbjct: 172 MEWLKTGCLILASVQMATALAACPNQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224


>gi|62959175|gb|AAY23695.1| farnesyl diphosphate synthase [Planococcus sp. JL-69]
          Length = 144

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 7/136 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH ++DE TA++AG+ L T  FE+++ P       +R+ L LSL    G +GM
Sbjct: 12  MRRGMPTVHRKWDEATAVLAGDALQTLGFELVACPDCHPDAVVRADLALSLARAAGARGM 71

Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LD+  E  D      Q+  +Q  KTGAL  ++ E+GA MA A       L  +  
Sbjct: 72  VLGQALDMAAEQSDTPLSLDQITALQAGKTGALFGWSAEAGARMARADITP---LTGYAR 128

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ADD+LD E
Sbjct: 129 ALGLAFQIADDILDVE 144


>gi|260773301|ref|ZP_05882217.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           metschnikovii CIP 69.14]
 gi|260612440|gb|EEX37643.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           metschnikovii CIP 69.14]
          Length = 261

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 113/199 (56%), Gaps = 11/199 (5%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYI 100
           +RY LL GGK+ R +LV     +     LT L   A A+EC+H YSLIHDDLP+MD+  +
Sbjct: 1   MRYGLLLGGKRARPYLVYITGQMLGCQ-LTDLDTPACAVECVHAYSLIHDDLPAMDDDDL 59

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGM 159
           RRGKPT HI++DE TAI+ G+ L T AF I++  + +   +  R +++ +L    G QGM
Sbjct: 60  RRGKPTCHIKFDEATAILTGDALQTLAFTILAEGQLSTHGETNRIKMVQALAEASGAQGM 119

Query: 160 LGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFG 214
             GQ LD+  E     +DE +   I   KTGALM  A   GA+ A         +L  + 
Sbjct: 120 CLGQALDLAAENRRITLDELET--IHHNKTGALMRCAIRMGAMAAGQKGLAILPQLDRYA 177

Query: 215 ENLGIIFQLADDLLDCEED 233
             +G+ FQ+ DD+LD   D
Sbjct: 178 AAVGLAFQVQDDILDIISD 196


>gi|300814962|ref|ZP_07095190.1| geranyltranstransferase family protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300510932|gb|EFK38204.1| geranyltranstransferase family protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 289

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 132/236 (55%), Gaps = 13/236 (5%)

Query: 11  ENSKRIDTI---LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL--VTECASL 64
           +N + ++TI   LD  L  T +++      ++  +++Y+L  GGK+IR  L  +T     
Sbjct: 2   KNLEELNTIIGELDSYLSNTFTYVDDSLA-KIYESMKYSLFSGGKRIRPLLCMITYNELA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            N      L   A +E IH YSLIHDDLP+MD+  +RR KPT H  Y E  AI+AG+GLL
Sbjct: 61  ENPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLL 120

Query: 125 TYAFEIISSPKTQLK--DNIRS--QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178
             + E+IS     L   D ++   + +  + ++ G+ GM+GGQ+LDI   +E  +E    
Sbjct: 121 NMSMEVISKYMESLDDIDELKKCIKALKFIYNSSGVLGMIGGQLLDIDYLNEQYNEELCE 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            +  +KT AL+  +  +GAIMA        +L+ FG+ +G+ +Q  DDLLD  +DL
Sbjct: 181 DMYSLKTAALLKASIVTGAIMAGCDGEIITKLKEFGQYIGLAYQYKDDLLDMNKDL 236


>gi|148993815|ref|ZP_01823217.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae
           SP9-BS68]
 gi|168489033|ref|ZP_02713232.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae SP195]
 gi|147927640|gb|EDK78665.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae
           SP9-BS68]
 gi|183572405|gb|EDT92933.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae SP195]
 gi|332073546|gb|EGI84025.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA17570]
          Length = 291

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    ++++L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESVLEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ SL+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIASLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|62959171|gb|AAY23693.1| farnesyl diphosphate synthase [Erythrobacter longus]
          Length = 147

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 82/136 (60%), Gaps = 4/136 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +R GK T+H  YDE TA++AG+ L   AFEI++   T     +RS+L+ +L    G+ GM
Sbjct: 12  LRHGKATLHHVYDEATAVLAGDALHALAFEILADHGTSSDPFVRSELIATLGTASGMNGM 71

Query: 160 LGGQMLD-IQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GGQM+D + DE     D   +  +Q++KTGAL+  A E GA++       +  LR +  
Sbjct: 72  AGGQMMDMVADEEGVTYDLQAITRLQQLKTGALLSCAVEMGAVLGKVPVEGRAHLRAYSR 131

Query: 216 NLGIIFQLADDLLDCE 231
           ++G+ FQ+ADD+LD E
Sbjct: 132 DIGLAFQIADDILDVE 147


>gi|104774286|ref|YP_619266.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116514371|ref|YP_813277.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|103423367|emb|CAI98223.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116093686|gb|ABJ58839.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325126073|gb|ADY85403.1| Geranylgeranyl diphosphate synthase [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 287

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 17/233 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASL 64
           +  +E   +   I++D L      +  + +D R    + Y+++ GGK++R  L       
Sbjct: 2   TTFKEFQAKYTPIINDFL---EGQLAKESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDA 58

Query: 65  FNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             V  +T   V AA  IE IH YSLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ 
Sbjct: 59  LGVE-ITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179
           L     + I+  +   K      L+  +T  +G +GM+ GQ LDI    +E   E  +  
Sbjct: 118 LQPLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDH 171

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ +KTG L+  + +    +A     + ++   F ++ G  +QL DDL+D  E
Sbjct: 172 MEWLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224


>gi|325685896|gb|EGD27962.1| farnesyltranstransferase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 296

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 13/203 (6%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDL 92
           + R    + Y+++ GGK++R  L         V  +T   V AA  IE IH YSLIHDDL
Sbjct: 38  DSRFAEIMAYSVMAGGKRLRPLLFLATLDALGVE-ITEKEVQAACGIELIHTYSLIHDDL 96

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN   RRG+ T H ++ E  AI+AG+ L     + I+  +   K      L+  +T 
Sbjct: 97  PAMDNDDYRRGELTSHKKWGEAEAILAGDALQPLGIQWIAQAEHNWK------LIEIITE 150

Query: 153 NIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            +G +GM+ GQ LDI    +E   E  +  ++ +KTG L+  + +    +A     + ++
Sbjct: 151 AVGPKGMVAGQYLDIDTTNNEDSSEEVIDHMEWLKTGCLILASVQMATALAACPDQQAQK 210

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              F ++ G  +QL DDL+D  E
Sbjct: 211 YLAFAKHFGRSYQLYDDLVDIVE 233


>gi|254262158|emb|CAZ90487.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter
           turicensis]
          Length = 224

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 3/154 (1%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H  SLI DD+P MDN  +RRG+PT+H QY E  AI+A   LL+ AF ++ + +  
Sbjct: 4   AVEMVHASSLILDDIPCMDNAALRRGRPTIHRQYGEDVAILAAVALLSSAFGVMVAAQG- 62

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACES 195
           L    RSQ +  L+  +G QG++ GQ  D+++     +  ++    ++KT  L     + 
Sbjct: 63  LSPECRSQAVAELSMAVGTQGLVQGQYKDLREGTAPRSAEEIATTNELKTSVLFGATLQI 122

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A+ A AS   ++++RCF ++LG  FQL DDL D
Sbjct: 123 AALAAGASPAARQKMRCFAQDLGQAFQLLDDLAD 156


>gi|313124102|ref|YP_004034361.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280665|gb|ADQ61384.1| Farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 287

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 17/233 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASL 64
           +  +E   +   I++D L      +  + +D R    + Y+++ GGK++R  L       
Sbjct: 2   TTFKEFQAKYTPIINDFL---EGQLAKESDDSRFAEIMAYSVMAGGKRLRPLLFLATLDA 58

Query: 65  FNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             V  +T   V AA  IE IH YSLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ 
Sbjct: 59  LGVE-ITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179
           L     + I+  +   K      L+  +T  +G +GM+ GQ LDI    +E   E  +  
Sbjct: 118 LQPLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDH 171

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ +KTG L+  + +    +A     + ++   F ++ G  +QL DDL+D  E
Sbjct: 172 MEWLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224


>gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase
           [Thermococcus sibiricus MM 739]
 gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase
           [Thermococcus sibiricus MM 739]
          Length = 341

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 20/235 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67
           L+E  K +D ++ +L+ +    +       +  A R Y L GGK+IR F+V         
Sbjct: 10  LKEKIKIVDEVIFELIPEKEPKI-------IYDAARHYPLAGGKRIRPFIVLTSTEAVGG 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   A+   AA+E +H YSL+HDD+  MD    RRG+PTVH  +    AI+AG+ L +  
Sbjct: 63  NPEKAVYAAAAVELLHNYSLVHDDIMDMDEK--RRGRPTVHKVWGVNMAILAGDLLFSKV 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---K 184
           FE ++    + +  ++   ++S T N     +  GQ  D++ E  +   +    KM   K
Sbjct: 121 FEAVAKIPVEAEKVVKVLDVISKTSN----ELCEGQARDLEFENKETVTIDEYMKMISGK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           TGAL+  +   G ++   +    + L  +G N+GI FQ+ DD+LD    EE L K
Sbjct: 177 TGALIDASATIGGLIGTENNEYIQALSKYGRNVGIAFQIWDDVLDLIADEEKLGK 231


>gi|17481240|dbj|BAB79204.1| farnesyl diphosphate synthase [Rhodobacter sp. AP-10]
          Length = 137

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 8/130 (6%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PTVH+++DEVTA++AG+ L T AFE+   P     D  R +L+ +L    G++GM
Sbjct: 12  LRRGQPTVHVKWDEVTAVLAGDALQTLAFELCCDPAMGPADR-RIELVAALARASGVEGM 70

Query: 160 LGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LDI  E         ++  +Q  KTGAL+ FA E+GAI+A A   ++  LR + +
Sbjct: 71  VHGQALDIAAESAGRPLTLEEITALQAGKTGALIVFAAEAGAILAGA---DRAPLRRYAQ 127

Query: 216 NLGIIFQLAD 225
            LG+ FQ+AD
Sbjct: 128 ALGLAFQIAD 137


>gi|313886949|ref|ZP_07820652.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923646|gb|EFR34452.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 334

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)

Query: 39  LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L + IRY L   G K++R  L     +        A     A+E  H ++L+HDD+  MD
Sbjct: 34  LYAPIRYTLEQEGAKRVRPVLALLMQAYLRPEAPLAASPIVALEVFHNFTLLHDDV--MD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKP+V+ +Y    AI++G+ +L  A+++++       + +  +++  L  N   
Sbjct: 92  NSPVRRGKPSVYAKYGLTPAILSGDAMLILAYQMLT-------EGVSPEMLPDLIQNFNK 144

Query: 157 QGML--GGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
              L   GQ LD++ E   ++ + Q   +   KT  L+  A   GAI++  S  E E   
Sbjct: 145 MATLIMEGQQLDLEYEQLDYVSKEQYLEMIGYKTAVLIATATRFGAILSKGSATELESSY 204

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FG NLG+ FQL DD LD   D
Sbjct: 205 AFGWNLGLAFQLQDDYLDLYGD 226


>gi|146304882|ref|YP_001192198.1| geranyltranstransferase [Metallosphaera sedula DSM 5348]
 gi|145703132|gb|ABP96274.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Metallosphaera sedula DSM 5348]
          Length = 327

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 121/227 (53%), Gaps = 15/227 (6%)

Query: 16  IDTILDDLLLQTASHMQT-QHND--RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
           +D   ++++ +  + M +  H D   L  A RY +  GGK++R  +V   + L       
Sbjct: 3   LDQYFEEIVAKVNATMDSFLHGDTRELYEASRYLISAGGKRLRPLVVVLSSDLLGGERHR 62

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+  GAA+E +H ++LIHDD+  MD    RRG PTVH+++   TAI+AG+ L   AF+I+
Sbjct: 63  AILAGAAVEVLHNFTLIHDDI--MDQDTTRRGIPTVHVKWGIPTAILAGDLLHAKAFQIL 120

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188
           +     L  ++  +++   + ++ +  +  GQ +D++ E    I E     + + KT  L
Sbjct: 121 TESIKGLSGDVAYKVLDCFSRSVIV--VSEGQAMDMEFEKRWDIREKDYLEMIRRKTAQL 178

Query: 189 MCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             FAC +  G ++A  S+ E   L  FGE +GI FQ+ DD+L    D
Sbjct: 179 --FACSAYLGGVLAGGSEEEVNNLYEFGEKMGIAFQIVDDILGITAD 223


>gi|209965378|ref|YP_002298293.1| geranyltranstransferase [Rhodospirillum centenum SW]
 gi|209958844|gb|ACI99480.1| geranyltranstransferase [Rhodospirillum centenum SW]
          Length = 289

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 13/200 (6%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           RL  A+RY++  GG ++R  L    A     +   LT     A+IE +HC SL+HDDLP 
Sbjct: 26  RLAEAMRYSVFPGGHRLRPRLCVAVARACGDDAPELTDA-AAASIELLHCASLVHDDLPC 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            D+  IRR KP+VH  + E  A++AG+GL+  AF++++    Q  D +   LM  ++ ++
Sbjct: 85  FDDASIRRSKPSVHKAFGEPLAVLAGDGLIVLAFDLLARAAAQRPDRL-IPLMGVVSRSV 143

Query: 155 GL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           G+  G++ GQ  + +     E  +    + KTGAL   A  +    A A+  +    R  
Sbjct: 144 GVPSGIIAGQAWECE----PEADLSEYHRAKTGALFAGATMA---GAAAAGADPTPWRFL 196

Query: 214 GENLGIIFQLADDLLDCEED 233
           GE LG  +Q+ADDL D   D
Sbjct: 197 GERLGEAYQVADDLRDVAAD 216


>gi|167764761|ref|ZP_02436882.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC
           43183]
 gi|167697430|gb|EDS14009.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC
           43183]
          Length = 324

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 18/221 (8%)

Query: 22  DLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           +LL +  SH+     +R    L   + Y L +GGK+IR  L+    +L+  +        
Sbjct: 6   ELLDKINSHIADLQFERTPKGLYDPVAYVLSMGGKRIRPVLMLMAYNLYKEDVRPVFSPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PK 135
             IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A++ ++  P 
Sbjct: 66  TGIEVYHNYTLLHDDL--MDRADKRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAQCPA 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFA 192
             LK  +    + SLT    L+ +  GQ +D+   Q   + E +   + ++KT  L+  +
Sbjct: 124 EHLKAVMD---LFSLT---ALE-ICEGQQMDMDFEQRSDVKEEEYLEMIRLKTSVLLAAS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GA++  AS  + ERL  FG N+G+ FQL DDLLD   D
Sbjct: 177 LKIGALLGGASAEDAERLYDFGMNMGVAFQLKDDLLDVYGD 217


>gi|29347468|ref|NP_810971.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29339368|gb|AAO77165.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 324

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 16/207 (7%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T+  + L   I Y L LGGK+IR  L+    +L+  +  +       IE  H ++L+HDD
Sbjct: 21  TRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPATGIEVYHNHTLLHDD 80

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLS 149
           L  MD   +RRGKPTVH  +++ TAI++G+ +L  AF  ++  +P+  LK+ I    + S
Sbjct: 81  L--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPE-HLKEVID---LFS 134

Query: 150 LTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           LT    L+ +  GQ LD++ E    + E +   + ++KT  L+  + + GAI+A AS  +
Sbjct: 135 LT---ALE-ICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASLKIGAILAGASAAD 190

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
            E L  FG  +G+ FQL DDLLD   D
Sbjct: 191 AENLYNFGMQIGVAFQLQDDLLDVYGD 217


>gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21]
 gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21]
          Length = 328

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 17/198 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIR  +V   A         AL+  AA+E IH +SLIHDD+  MD   +RRG+P+VH
Sbjct: 41  GGKKIRPSMVVLSAIAVGGAPEEALKTAAAVELIHTFSLIHDDI--MDEDDMRRGEPSVH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQML 165
           + + E  AI+AG+ L + AFE ++ +P     DN+  + ++     +      +  GQ  
Sbjct: 99  VLWGEPMAILAGDTLFSKAFETVLETP----IDNVSYERVVGALKTVVDSCIKICEGQAS 154

Query: 166 DI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D+      E  +E  + MI K KTGAL+  + +SGAI+   +  + E L  +G  +G+ F
Sbjct: 155 DMCFEGNFEVSEEAYMNMIYK-KTGALIAASTKSGAIIGGGTPEQVELLSEYGRLVGLAF 213

Query: 222 QLADDLLDC---EEDLPK 236
           Q+ DD LD    E+DL K
Sbjct: 214 QIQDDYLDVMSDEQDLGK 231


>gi|229579956|ref|YP_002838355.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14]
 gi|228010671|gb|ACP46433.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14]
          Length = 331

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68
           S  + +  +D++     H++   + N R L    + L   GGK++R  ++   + L   +
Sbjct: 2   SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG+ L   AF
Sbjct: 62  RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187
           E ++     L  +   +      ++I +  +  GQ +D+  E  +D T+   +Q +K   
Sbjct: 120 EALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKT 177

Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            M F+C +  G I+  AS +  + L  +G NLGI FQ+ DD+L
Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDIL 220


>gi|227831075|ref|YP_002832855.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15]
 gi|229581383|ref|YP_002839782.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51]
 gi|238620509|ref|YP_002915335.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4]
 gi|284998571|ref|YP_003420339.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5]
 gi|227457523|gb|ACP36210.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15]
 gi|228012099|gb|ACP47860.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51]
 gi|238381579|gb|ACR42667.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4]
 gi|284446467|gb|ADB87969.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5]
          Length = 331

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68
           S  + +  +D++     H++   + N R L    + L   GGK++R  ++   + L   +
Sbjct: 2   SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG+ L   AF
Sbjct: 62  RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187
           E ++     L  +   +      ++I +  +  GQ +D+  E  +D T+   +Q +K   
Sbjct: 120 EALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKT 177

Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            M F+C +  G I+  AS +  + L  +G NLGI FQ+ DD+L
Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDIL 220


>gi|111073607|emb|CAL29452.1| geranyltranstransferase [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 243

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 14/225 (6%)

Query: 16  IDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKK--IRSFLVTECASLFNVNHLTA 72
           +D ++  LL+ +T   +     ++ + A+ Y L    K  IR  L+T  + +FN     A
Sbjct: 2   LDKLIKSLLIAETDKILSKVSQNKHILAMHYVLFAPTKHIIRPLLITALSQVFNSE---A 58

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNG--YIRRGKPTVHIQYDEVTAI-IAGNGLLTYAFE 129
           + +  A++C+H +SLI DDLP +DN     +      + ++DE TA+ +A +  LT A E
Sbjct: 59  ISIAVAVKCVHTHSLIQDDLPYIDNSNNNSKNQLSCCYKKFDEATAVLVAEDAPLTLASE 118

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I+SSP      N R +++ S +   G +GM+G Q+LD    F    ++  +  MKT  L+
Sbjct: 119 ILSSPNKD--SNKRHEIIKSPSQMRGTKGMVGEQVLDSDKNF---GKIKKMHLMKTAKLL 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
              C+ GAI+      ++  L  +  NLG+IFQ  DD  + E+ L
Sbjct: 174 AAPCKIGAIVGDTPDKQRRALYNYRINLGLIFQAEDDTENYEQAL 218


>gi|322376511|ref|ZP_08051004.1| geranyltranstransferase [Streptococcus sp. M334]
 gi|321282318|gb|EFX59325.1| geranyltranstransferase [Streptococcus sp. M334]
          Length = 291

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    + + L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVQSALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  +   +E+L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEMQEKLKTVGELIGLAFQVRDDVLDV 220


>gi|15228704|ref|NP_189589.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75335025|sp|Q9LIA0|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
           chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
           AltName: Full=Dimethylallyltranstransferase 11; AltName:
           Full=Farnesyl diphosphate synthase 11; AltName:
           Full=Farnesyltranstransferase 11; AltName:
           Full=Geranyltranstransferase 11; Flags: Precursor
 gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
          Length = 357

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 11/200 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MD+  +
Sbjct: 93  AVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADL 152

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H ++ E  A++AG+ LL  AFE    +S+     +  IR+  ++ L   IG +
Sbjct: 153 RRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRA--VMELAKAIGTK 210

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQ+ D+  + ++   V +     I   KT AL+  A   GAIM   ++ E E+LR 
Sbjct: 211 GLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRK 270

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +   +G++FQ+ DD+LD  E
Sbjct: 271 YARCIGLLFQVVDDILDVTE 290


>gi|199597161|ref|ZP_03210593.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
 gi|258508675|ref|YP_003171426.1| geranyltranstransferase [Lactobacillus rhamnosus GG]
 gi|199591965|gb|EDZ00040.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
 gi|257148602|emb|CAR87575.1| Geranyltranstransferase [Lactobacillus rhamnosus GG]
 gi|259649981|dbj|BAI42143.1| geranyltranstransferase [Lactobacillus rhamnosus GG]
          Length = 283

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 7/200 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L +A+ Y++  GGK++R  L+    ++++     AL   AA+E +H YSLIHDDLP+
Sbjct: 25  NPHLRAAMAYSVDAGGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPA 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRG+PT H Q+ E  AI+AG+ LLT AF I+S    Q      ++L+  L    
Sbjct: 85  MDNDDLRRGQPTNHKQFGEALAILAGDALLTDAFAILS----QHYPGKGAELVQILAEAA 140

Query: 155 GLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+ GQ+LD+  E    D   +  + + KTGAL+      G++     + ++  L  
Sbjct: 141 GSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALAD 200

Query: 213 FGENLGIIFQLADDLLDCEE 232
           F    G+ FQ+ DD+ D  +
Sbjct: 201 FAAAFGLGFQIKDDINDVTK 220


>gi|307708727|ref|ZP_07645190.1| geranyltranstransferase [Streptococcus mitis NCTC 12261]
 gi|307615301|gb|EFN94511.1| geranyltranstransferase [Streptococcus mitis NCTC 12261]
          Length = 291

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|298385074|ref|ZP_06994633.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
 gi|298262218|gb|EFI05083.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
          Length = 324

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 16/221 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           +LD +    + +  T+  + L   I Y L LGGK+IR  L+    +L+  +  +      
Sbjct: 7   LLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPAT 66

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPK 135
            IE  H ++L+HDDL  MD   +RRGKPTVH  +++ TAI++G+ +L  AF  ++  +P+
Sbjct: 67  GIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPE 124

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             LK+ I    + SLT    L+ +  GQ LD++ E    + E +   + ++KT  L+  +
Sbjct: 125 -HLKEVID---LFSLT---ALE-ICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAAS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GAI+A AS  + E L  FG  +G+ FQL DDLLD   D
Sbjct: 177 LKIGAILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGD 217


>gi|60682991|ref|YP_213135.1| putative isoprenoid biosynthesis-like protein [Bacteroides fragilis
           NCTC 9343]
 gi|60494425|emb|CAH09221.1| putative isoprenoid biosynthesis related protein [Bacteroides
           fragilis NCTC 9343]
          Length = 324

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L +GGK+IR  L+    +L+  +  +      AIE  H Y+L+HDDL  MD 
Sbjct: 27  LYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATAIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRGK TVH  +++ TAI++G+ +L  A++ +++  ++ LK+ +    + SLT    L
Sbjct: 85  ADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMD---LFSLT---AL 138

Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ +D+     E + E +   + ++KT  L+  + + GAI+  AS  + E L  F
Sbjct: 139 E-ICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  +G+ FQL DDLLD   D
Sbjct: 198 GMQIGVAFQLQDDLLDVYGD 217


>gi|282881608|ref|ZP_06290277.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
 gi|281304594|gb|EFA96685.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
          Length = 324

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 16/201 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L+    +L+  +    L    AIE  H Y+L+HDDL  MD 
Sbjct: 27  LYEPIEYVLSLGGKRIRPILMMLAYNLYQEHPEEILMPACAIETYHNYTLLHDDL--MDC 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRG  TVH ++D  TAI++G+ +L  A++ +++ +   LK+ I   L       IG 
Sbjct: 85  ADLRRGCATVHKRWDANTAILSGDSMLVLAYQRMATCRADYLKEVI--DLFTQTALEIG- 141

Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
                GQ  D+    +D+  ++  + MI ++KT  L+  A + GAI+  ASQ + E L  
Sbjct: 142 ----EGQQYDMDFEKRDDVTEDEYIEMI-RLKTSVLLACALKIGAILGGASQEDAENLYR 196

Query: 213 FGENLGIIFQLADDLLDCEED 233
           FGE +G+ FQL DD LD   D
Sbjct: 197 FGEKIGLAFQLQDDYLDVYGD 217


>gi|227828317|ref|YP_002830097.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25]
 gi|229585547|ref|YP_002844049.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27]
 gi|227460113|gb|ACP38799.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25]
 gi|228020597|gb|ACP56004.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27]
          Length = 331

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68
           S  + +  +D++     H++   + N R L    + L   GGK++R  ++   + L   +
Sbjct: 2   SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG+ L   AF
Sbjct: 62  RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187
           E ++     L  +   +      ++I +  +  GQ +D+  E  +D T+   +Q +K   
Sbjct: 120 EALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKT 177

Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            M F+C +  G I+  AS +  + L  +G NLGI FQ+ DD+L
Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDIL 220


>gi|323478112|gb|ADX83350.1| Farnesyltranstransferase [Sulfolobus islandicus HVE10/4]
          Length = 331

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 11/223 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVN 68
           S  + +  +D++     H++   + N R L    + L   GGK++R  ++   + L   +
Sbjct: 2   SDELSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGD 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG+ L   AF
Sbjct: 62  RQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAF 119

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGA 187
           E ++     L  +   +      ++I +  +  GQ +D+  E  +D T+   +Q +K   
Sbjct: 120 EALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKT 177

Query: 188 LMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            M F+C +  G I+  AS +  + L  +G NLGI FQ+ DD+L
Sbjct: 178 AMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDIL 220


>gi|319903089|ref|YP_004162817.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
 gi|319418120|gb|ADV45231.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
          Length = 324

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 121/221 (54%), Gaps = 18/221 (8%)

Query: 22  DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           ++L +  SH+     T+    L + + Y L +GGK+IR  L+    +L+  + + A    
Sbjct: 6   EILKKINSHIADLKFTRTPQGLYAPVSYVLSMGGKRIRPVLMLMSYNLYKEDIVRAYGPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PK 135
             IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A++ ++  P 
Sbjct: 66  IGIEVYHNYTLLHDDL--MDCADRRRGKKTVHKVWNDNTAILSGDAMLVLAYQYMAQCPA 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             LK+ +    + SLT    L+ +  GQ +D++ E    + E +   + ++KT  L+  +
Sbjct: 124 GYLKEVMD---LFSLT---ALE-ICEGQQMDMEFELRKDVKEGEYLEMIRLKTSVLLAAS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GA++  AS  + E L  FG NLGI FQL DDLLD   D
Sbjct: 177 LKIGALLGGASAEDAEHLYNFGMNLGIAFQLKDDLLDVYGD 217


>gi|329957776|ref|ZP_08298251.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
 gi|328522653|gb|EGF49762.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
          Length = 324

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L +GGK+IR  L+    +L+  N   A      IE  H Y+L+HDDL  MD 
Sbjct: 27  LYDPITYVLSMGGKRIRPVLMLMAYNLYKENVEPAFSSATGIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
              RRGK TVH  +++  AI++G+ +L  A++ ++  P   LK+ +    + SLT     
Sbjct: 85  ADKRRGKETVHKVWNDNAAILSGDAMLVLAYQFMAQCPVKHLKEVMD---LFSLTAF--- 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ +D++ E    + E +   + ++KT  L+  + + GA++  AS ++  RL  F
Sbjct: 139 -EICEGQQMDMEFEQRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASADDAARLYDF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GMNMGVAFQLKDDLLDVYGD 217


>gi|1842242|gb|AAC44848.1| geranylgeranyl synthase [Flavobacterium sp. ATCC 21588]
          Length = 295

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 2/188 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           AL  GK+ R+ L+   A          +    A+E +H  SLI DD+P MD+   RRG+P
Sbjct: 39  ALSPGKRFRAVLMLMVAESSGGVCDAMVDAACAVEMVHAASLIFDDMPCMDDARTRRGQP 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             H+ + E  A++AG  L+T A  I+   +    D  R++L+ S++  +G  G+  GQ L
Sbjct: 99  ATHVAHGEGRAVLAGIALITEAMRILGEARGATPDQ-RARLVASMSRAMGPVGLCAGQDL 157

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+     D   +   Q +KTG L     E  +I+    + E E+L  FG  LG +FQ  D
Sbjct: 158 DLHAPK-DAAGIEREQDLKTGVLFVAGLEMLSIIKGLDKAETEQLMAFGRQLGRVFQSYD 216

Query: 226 DLLDCEED 233
           DLLD   D
Sbjct: 217 DLLDVIGD 224


>gi|253570683|ref|ZP_04848091.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251839632|gb|EES67715.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 324

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 16/221 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           +LD +    + +  T+  + L   I Y L LGGK+IR  L+    +L+  +  +      
Sbjct: 7   LLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPAT 66

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPK 135
            IE  H ++L+HDDL  MD   +RRGKPTVH  +++ TAI++G+ +L  AF  ++  +P+
Sbjct: 67  GIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAPE 124

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             LK+ I    + SLT    L+ +  GQ LD++ E    + E +   + ++KT  L+  +
Sbjct: 125 -HLKEVID---LFSLT---ALE-ICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAAS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GAI+A AS  + E L  FG  +G+ FQL DDLLD   D
Sbjct: 177 LKIGAILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGD 217


>gi|195977755|ref|YP_002122999.1| geranyltranstransferase LepA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195974460|gb|ACG61986.1| geranyltranstransferase LepA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 289

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 103/200 (51%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHCYSLIHDDLPSMD 96
           L  AI Y++ GG K    L+           LT     + AAIE IH  SLIHDDLP+MD
Sbjct: 25  LEEAILYSVDGGGKRLRPLILLELLEGFGLALTDAHYAIAAAIEMIHTGSLIHDDLPAMD 84

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG+ T H Q+DE TAI+AG+ L    F +I+     L  ++  QL+   +   G 
Sbjct: 85  NDDYRRGRLTSHKQFDEATAILAGDSLFLDPFALIAG--ADLPADLLVQLIQQFSLASGT 142

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEKERL 210
            GM+GGQ+LD++     E Q+  IQ++      KTG L+     +  I+A  S +    L
Sbjct: 143 FGMVGGQLLDMK----GEQQLLNIQELSDIHANKTGKLLTLPFVAAGIIAEQSADVLSCL 198

Query: 211 RCFGENLGIIFQLADDLLDC 230
              G  +G  FQ+ DD+LD 
Sbjct: 199 WEAGRLVGQAFQIRDDILDV 218


>gi|265766878|ref|ZP_06094707.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263253255|gb|EEZ24731.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 324

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L +GGK+IR  L+    +L+  +  +      AIE  H Y+L+HDDL  MD 
Sbjct: 27  LYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATAIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRGK TVH  +++ TAI++G+ +L  A++ +++  ++ LK+ +    + SLT    L
Sbjct: 85  ADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMD---LFSLT---AL 138

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ +D+     E + E +   + ++KT  L+  + + GAI+  AS  + E L  F
Sbjct: 139 E-ICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  +G+ FQL DDLLD   D
Sbjct: 198 GMQIGVAFQLQDDLLDVYGD 217


>gi|253566127|ref|ZP_04843581.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945231|gb|EES85669.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 324

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L +GGK+IR  L+    +L+  +  +      AIE  H Y+L+HDDL  MD 
Sbjct: 27  LYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATAIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRGK TVH  +++ TAI++G+ +L  A++ +++  ++ LK+ +    + SLT    L
Sbjct: 85  ADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMD---LFSLT---AL 138

Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ +D+     E + E +   + ++KT  L+  + + GAI+  AS  + E L  F
Sbjct: 139 E-ICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  +G+ FQL DDLLD   D
Sbjct: 198 GMQIGVAFQLQDDLLDVYGD 217


>gi|53715029|ref|YP_101021.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46]
 gi|52217894|dbj|BAD50487.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46]
 gi|301164456|emb|CBW24014.1| putative isoprenoid biosynthesis related protein [Bacteroides
           fragilis 638R]
          Length = 324

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y L +GGK+IR  L+    +L+  +  +      AIE  H Y+L+HDDL  MD 
Sbjct: 27  LYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPATAIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGL 156
             +RRGK TVH  +++ TAI++G+ +L  A++ +++  ++ LK+ +    + SLT    L
Sbjct: 85  ADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSSEHLKEVMD---LFSLT---AL 138

Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ +D+     E + E +   + ++KT  L+  + + GAI+  AS  + E L  F
Sbjct: 139 E-ICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASLKIGAILGGASPEDAENLYDF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  +G+ FQL DDLLD   D
Sbjct: 198 GMQIGVAFQLQDDLLDVYGD 217


>gi|332300739|ref|YP_004442660.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177802|gb|AEE13492.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 334

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)

Query: 39  LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L + IRY L   G K++R  L     +        A     A+E  H ++L+HDD+  MD
Sbjct: 34  LYAPIRYTLEQEGAKRVRPVLALLMQAYLRPEAPLAASPIVALEVFHNFTLLHDDV--MD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKP+V+ +Y    AI++G+ +L  A+++++       + +  +++  L  N   
Sbjct: 92  NSPVRRGKPSVYAKYGLTPAILSGDAMLILAYQMLT-------EGVSPEMLPDLIQNFNK 144

Query: 157 QGML--GGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
              L   GQ LD++ E   ++ + Q   +   KT  L+  A   GAI++  S  E E   
Sbjct: 145 MATLIMEGQQLDLEYEQLDYVSKEQYLEMIGYKTAVLIATATRFGAILSKGSVTELESSY 204

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FG NLG+ FQL DD LD   D
Sbjct: 205 AFGWNLGLAFQLQDDYLDLYGD 226


>gi|188994672|ref|YP_001928924.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188594352|dbj|BAG33327.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 325

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 12/201 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   I Y L LGGK++R  L      +F  ++  AL V  AIE  H ++L+HDDL  M
Sbjct: 26  DGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVAMAIETYHNFTLLHDDL--M 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRGK TVH ++ + TAI++G+ +   A+E ++   ++L       ++L L + + 
Sbjct: 84  DKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDSRL-----LPVLLPLFNRMA 138

Query: 156 LQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           ++ +  GQ  D+  E   F+ E +   + ++KT  L+  A + GAI   A   + + L  
Sbjct: 139 ME-ICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATALKMGAIAGGADIEKADILYR 197

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G ++G+ FQL DDLLD   D
Sbjct: 198 YGIHIGLSFQLEDDLLDVYGD 218


>gi|160901676|ref|YP_001567257.1| polyprenyl synthetase [Petrotoga mobilis SJ95]
 gi|160359320|gb|ABX30934.1| Polyprenyl synthetase [Petrotoga mobilis SJ95]
          Length = 288

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 15/198 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R +++     + ++N    + +  A+E +H  SLIHDDLP++DN  +RRG  T H
Sbjct: 41  GGKRLRPWIIYNFGQIISINKKNLIDIAIAVEILHSSSLIHDDLPALDNAKLRRGALTTH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLD 166
           +++ E  AI+AG+   T   +I++       DNI+  ++L+L       +  +  G+M D
Sbjct: 101 LKFGEYKAILAGDYGFTLPLQIVAGL-----DNIKEGNKLLLVDYFIKTILKLFQGEMED 155

Query: 167 I----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +    +D+ + E ++  +   KTGA+  F   S  +MA  ++  KE +   G + G+ FQ
Sbjct: 156 LIFEKEDKNVGEKEILEMYSKKTGAVFGFCFASPFLMAGEAELAKE-MNKIGTDFGVSFQ 214

Query: 223 LADDLLDC---EEDLPKK 237
           + DDL D    EED+ K+
Sbjct: 215 IFDDLKDIFTKEEDIGKE 232


>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 23/200 (11%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A+RY+LL GGK++R  L      L       AL    A+E IH  SLIHDDLP   
Sbjct: 77  KIHEAMRYSLLAGGKRVRPVLCIAACELVGGEEFLALPAACAVEMIHTMSLIHDDLPF-- 134

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155
                         + E  A++AG+ LL++AFE +++   ++    R  + +  L   IG
Sbjct: 135 --------------FGEDVAVLAGDALLSFAFEHLATETPEIISPARVVRAIGELAKAIG 180

Query: 156 LQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +G++ GQ++D+  E +D+  V +     I   KT  L+  A   GAI    +  E ERL
Sbjct: 181 SEGLVAGQVVDLTSEGMDQNDVGLELLEFIHLHKTAVLLEAATVLGAIFGGGTNEEIERL 240

Query: 211 RCFGENLGIIFQLADDLLDC 230
           R F   +G++FQ+ DD+LD 
Sbjct: 241 RKFARCIGLLFQVVDDILDV 260


>gi|77919267|ref|YP_357082.1| geranyltranstransferase [Pelobacter carbinolicus DSM 2380]
 gi|77545350|gb|ABA88912.1| farnesyl-diphosphate synthase [Pelobacter carbinolicus DSM 2380]
          Length = 296

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 10/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           L + L+E   ++D  LD  L        + H      A+RY+    GK+IR  L+     
Sbjct: 3   LNAYLKERRAQVDKALDTYLPGEDVLPISLHK-----AMRYSTFAAGKRIRPILMMAACE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    +    A+E IH YSLIHDDLP+MD+   RRG+PT H  Y +  AI+AG+ L
Sbjct: 58  AVGGTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LT AF ++S        ++ +   +S  +    G  GM+GGQ++D+  E   ID   +  
Sbjct: 118 LTEAFILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLEY 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KTGAL+  + +SGA++  AS  + + L  + +  G+ FQ+ADD+LD   D
Sbjct: 178 IHTRKTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGD 231


>gi|34540567|ref|NP_905046.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
 gi|34396880|gb|AAQ65945.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
          Length = 325

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 12/201 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   I Y L LGGK++R  L      +F  ++  AL V  AIE  H ++L+HDDL  M
Sbjct: 26  DGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVAMAIETYHNFTLLHDDL--M 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRGK TVH ++ + TAI++G+ +   A+E ++   ++L       ++L L + + 
Sbjct: 84  DKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDSRL-----LPVLLPLFNRMA 138

Query: 156 LQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           ++ +  GQ  D+  E   F+ E +   + ++KT  L+  A + GAI   A   + + L  
Sbjct: 139 ME-ICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATALKMGAIAGGADIEKADILYR 197

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G ++G+ FQL DDLLD   D
Sbjct: 198 YGIHIGLSFQLEDDLLDVYGD 218


>gi|47531118|gb|AAT35222.1| fusion of carotene synthesis proteins [synthetic construct]
          Length = 1798

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 2/194 (1%)

Query: 40  LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           L A   AL  GK+ R  L+   A        T +    A+E +H  SLI DDLP MD+  
Sbjct: 355 LGAAMAALSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAG 414

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+P  H+ + E  A++ G  L+T A  +++  +      +R+QL+  L+ ++G QG+
Sbjct: 415 LRRGQPATHVAHGESRAVLGGIALITEAMALLAGARGA-SGTVRAQLVRILSRSLGPQGL 473

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             GQ LD+     +   V   Q +KTG L     E  A++      E+ ++  FG  LG 
Sbjct: 474 CAGQDLDLHAA-KNGAGVEQEQDLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGR 532

Query: 220 IFQLADDLLDCEED 233
           +FQ  DDLL+   D
Sbjct: 533 VFQSYDDLLEVVGD 546


>gi|228474123|ref|ZP_04058864.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274637|gb|EEK13478.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
          Length = 323

 Score =  101 bits (252), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 16/208 (7%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
            H++ +    L   I Y L +GGK++R  L    A +F  ++  AL    A+E  H +SL
Sbjct: 17  EHLKERDPKNLYDPIHYILNVGGKRLRPTLTMLSADIFGTDYHKALYAALAVEIFHNFSL 76

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  MD   +RRG PTVH +++  T I++G+ +L  A++       Q + NI  +L 
Sbjct: 77  VHDDI--MDAAPLRRGHPTVHTKWNLNTGILSGDTMLILAYQYFE----QYEPNIFQELA 130

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK-----TGALMCFACESGAIMAHA 202
             +     ++ +  GQ  D+  +F  + QV   Q +K     T  L+  A + GAI+A  
Sbjct: 131 -KIFSKTAIE-VCEGQQYDV--DFEQQAQVSTDQYLKMIAYKTAVLVGAALQMGAIIAQT 186

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
           ++  K+++  FG  LGI +QL DD LD 
Sbjct: 187 TEENKQKIYDFGLALGIAYQLQDDYLDT 214


>gi|326335315|ref|ZP_08201510.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692586|gb|EGD34530.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 323

 Score =  101 bits (252), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 16/220 (7%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++ L     H   +    L   I Y L +GGK++R  L    A++F  ++  AL    A+
Sbjct: 9   NEFLAFMKEHFVEREPKSLYDPIHYILNVGGKRLRPTLTMLSANIFGEDYHKALYAALAV 68

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H +SL+HDD+  MD   +RRG+PTVH +++  T I++G+ +L  A++       Q +
Sbjct: 69  EIFHNFSLVHDDI--MDEASLRRGQPTVHTKWNLNTGILSGDTMLILAYQYFE----QYE 122

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK-----TGALMCFACE 194
            NI  +L   +     ++ +  GQ  D+  +F  E QV   Q +K     T  L+  A +
Sbjct: 123 PNIFQELA-KIFSKTAIE-VCEGQQYDV--DFEKEVQVSTDQYLKMIAYKTAVLIGAALK 178

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            GAI+A  ++  K+++  FG  LGI +QL DD LD   D+
Sbjct: 179 MGAIIAQTTEENKQQIYDFGLALGIAYQLQDDYLDTFGDV 218


>gi|323140954|ref|ZP_08075866.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067]
 gi|322414557|gb|EFY05364.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067]
          Length = 291

 Score =  101 bits (252), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 12/197 (6%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+L+ GGK+IR  L+   A          L V   +E IH YSLIHDDLP MD+   
Sbjct: 33  AMEYSLMAGGKRIRPILLMAAAEAVGSKGYNYLPVACGLEMIHTYSLIHDDLPCMDDDDY 92

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GL 156
           RRG+ T H  + E  A++AG+GLLT AFE++   K     N+  ++++     +    G 
Sbjct: 93  RRGRLTNHKVFGEAMAVLAGDGLLTLAFEVMLEQK-----NVDPKVLIETVREMAMCAGN 147

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ LD++ E   I   ++  +   KTGAL   A   GA +A A+  +   L  F 
Sbjct: 148 FGMVGGQGLDLEFEGKKITPEELRKLHAGKTGALFIAAIRGGAHLAGANDQQLLALTKFA 207

Query: 215 ENLGIIFQLADDLLDCE 231
           + LG+ FQ+ DD+LD E
Sbjct: 208 DLLGLAFQITDDILDVE 224


>gi|298372651|ref|ZP_06982641.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275555|gb|EFI17106.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 318

 Score =  101 bits (252), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 107/195 (54%), Gaps = 12/195 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L  GGK++R  LV     +F  +  T      AIE  H ++L+HDDL  MD+
Sbjct: 21  LYKPIEYTLDSGGKRLRPMLVAIACEMFGKSSETVENAAVAIEIFHNFTLLHDDL--MDD 78

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RR KPTVH++++  TAI++G+ +L  A+E ++    ++ +   ++++   T    L+
Sbjct: 79  SPTRRNKPTVHVKWNANTAILSGDAMLIKAYEFLA----KIPEKYWAKVLPVFTQT-ALE 133

Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ  D+  E  D   +   F + ++KT  L+  + ++GAI+A AS+ ++  +   G
Sbjct: 134 -VCEGQQFDMDFETKDNVTIDEYFRMIRLKTAVLLACSLKTGAIIADASERDQRLIYDLG 192

Query: 215 ENLGIIFQLADDLLD 229
             +G+ FQL DD LD
Sbjct: 193 IAIGMAFQLKDDYLD 207


>gi|148653898|ref|YP_001280991.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1]
 gi|148572982|gb|ABQ95041.1| farnesyl-diphosphate synthase [Psychrobacter sp. PRwf-1]
          Length = 311

 Score =  101 bits (252), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 24/209 (11%)

Query: 42  AIRYALLG-GKKIRSFLV-----TECAS----------LFNVNHLTALRVGAAIECIHCY 85
           A  YA+ G GKK+R  LV     T  AS          LF+ N     R   A+E +H Y
Sbjct: 39  ACHYAMTGQGKKVRPLLVASSYLTVLASSQAATIDTLPLFDDN---CRRAMLAVEFLHTY 95

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIR 143
           SLIHDDLP MD+  +RRG+PT HI++ E TA++AG+ L T AFE +S+  P      N +
Sbjct: 96  SLIHDDLPCMDDDDLRRGRPTCHIKFGEATALLAGDVLQTLAFEALSADLPGFAPISNDK 155

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +  +L+L      + M+ GQMLD+  +++ + + Q+  I + KTGAL+  A   GA  A 
Sbjct: 156 AASLLTLFAPRA-RRMVSGQMLDLNAENKQVSQPQLEAIHRDKTGALIEAAVLMGAACAD 214

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A+  + + +  F  N+G+ FQ+ DD+LD 
Sbjct: 215 ANDTQYQAITSFASNVGLAFQVQDDILDV 243


>gi|168484957|ref|ZP_02709902.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC1873-00]
 gi|168493127|ref|ZP_02717270.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC3059-06]
 gi|221231906|ref|YP_002511058.1| geranyltranstransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225854677|ref|YP_002736189.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae JJA]
 gi|172041911|gb|EDT49957.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC1873-00]
 gi|183576658|gb|EDT97186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC3059-06]
 gi|220674366|emb|CAR68915.1| putative geranyltranstransferase [Streptococcus pneumoniae ATCC
           700669]
 gi|225722931|gb|ACO18784.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae JJA]
          Length = 291

 Score =  101 bits (252), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q+  I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQI--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|171702409|dbj|BAG16276.1| geranylgeranyl diphosphate synthase [Nocardia brasiliensis]
          Length = 332

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 17/202 (8%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            DRL +  RYA+   GK +R  L+ E A+    +    + +  A+E +H  +L+HDD+  
Sbjct: 31  GDRLDAVTRYAVQPPGKLVRPVLLVESAAAVGADPADLVPIAVALEYLHVATLVHDDI-- 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------PKTQLKDNIR--SQL 146
           +D   +RRG+PTVH +Y    AI+AG+ LL   F  ++       P   + + +R  +  
Sbjct: 89  IDGDLLRRGRPTVHARYGRDEAIVAGDALLLDTFRTLTEAAELGFPPAAVLEAVRIVAVA 148

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L L     ++  L G      D +    +   +  +KTGAL   AC +GA++   S  E
Sbjct: 149 GLDLCRGQAMEAGLAG------DLYCGMARYRTMAGLKTGALFIAACAAGAVLGGGSGEE 202

Query: 207 KERLRCFGENLGIIFQLADDLL 228
              LR F ++LG  FQ+ DDLL
Sbjct: 203 VRALRSFADHLGCAFQMRDDLL 224


>gi|161527820|ref|YP_001581646.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339121|gb|ABX12208.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
          Length = 326

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 11/192 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R ++V     +       A+   +A+E +H ++L+HDD+  MDN  +R G PT H
Sbjct: 40  GGKRLRPYMVIRSCQILGGKSSNAMPAASAVEMVHNFTLVHDDI--MDNDEMRHGVPTTH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
            +Y    AI+AG+ L + A+++IS   T+L     + L+  L        +  GQ+LD+ 
Sbjct: 98  RKYGMPIAILAGDVLFSKAYQVISD--TKLSPTATTHLISRLAK--ACVDVCEGQLLDVK 153

Query: 168 ---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              + +   ++Q   +   KT AL   +C  GAI A     +   L  FG NLGI FQ+ 
Sbjct: 154 MAEEKKIPTQSQYITMIGKKTAALFDVSCAMGAICATNKGKDISNLSSFGRNLGIAFQIT 213

Query: 225 DDLLDCEEDLPK 236
           DDL+    D PK
Sbjct: 214 DDLIGVMGD-PK 224


>gi|313204536|ref|YP_004043193.1| polyprenyl synthetase [Paludibacter propionicigenes WB4]
 gi|312443852|gb|ADQ80208.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4]
          Length = 325

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 109/200 (54%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L     +LF+ +  +A+     IE  H ++L+HDD+  MD 
Sbjct: 27  LYEPIGYVLSLGGKRIRPALTLMACNLFSDDVQSAMNTALGIEIFHNFTLLHDDI--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+PTVH ++D+ TAI++G+ +   +++ ++ +P+  LK        L L      
Sbjct: 85  ADVRRGRPTVHKKWDDNTAILSGDVMQIASYQFVTKTPEKYLKKT------LDLFSKTAA 138

Query: 157 QGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ  D+  E  D+ +      + ++KT  L+  A ++GA +  A + + + L  F
Sbjct: 139 E-ICEGQQYDVDFESRDDVKADEYLEMIRLKTAVLLGAALQTGAWIGGAGEEDAQLLYDF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GINIGLAFQLKDDLLDVYGD 217


>gi|225870049|ref|YP_002745996.1| geranyltranstransferase [Streptococcus equi subsp. equi 4047]
 gi|225699453|emb|CAW92957.1| putative geranyltranstransferase [Streptococcus equi subsp. equi
           4047]
          Length = 289

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 6/192 (3%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHCYSLIHDDLPSMDNGY 99
           AI Y++ GG K    L+           LT     V AA+E IH  SLIHDDLP+MDN  
Sbjct: 28  AILYSVDGGGKRLRPLMLLELLEGFGLALTDAHYAVAAAVEMIHTGSLIHDDLPAMDNDD 87

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRG+ T H Q++E TAI+AG+ L    F +I+     L  ++  QL+   +   G  GM
Sbjct: 88  YRRGRLTSHKQFNEATAILAGDSLFLDPFALIAG--ADLPADLLVQLIQQFSLASGTFGM 145

Query: 160 LGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ+LD++ E   +D  ++  I   KTG L+     +  I+A  S +    L   G  +
Sbjct: 146 VGGQLLDMKGEHQLLDIQELSDIHANKTGKLLTLPFVAAGIIAEQSADVLSCLWEAGRLV 205

Query: 218 GIIFQLADDLLD 229
           G  FQ+ DD+LD
Sbjct: 206 GQAFQIRDDILD 217


>gi|307709372|ref|ZP_07645830.1| putative geranyltranstransferase [Streptococcus mitis SK564]
 gi|307619955|gb|EFN99073.1| putative geranyltranstransferase [Streptococcus mitis SK564]
          Length = 291

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 126/229 (55%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E     +
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALH 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYVMIA--QADLPSQIKVDLIANLSFASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEVQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|327400499|ref|YP_004341338.1| polyprenyl synthetase [Archaeoglobus veneficus SNP6]
 gi|327316007|gb|AEA46623.1| Polyprenyl synthetase [Archaeoglobus veneficus SNP6]
          Length = 319

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 114/206 (55%), Gaps = 11/206 (5%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           + ++  +  + L +A R+ +  GGK++R  +    A     +  + +    AIE IH ++
Sbjct: 19  SEYLPVKEPEGLYNAARHLINAGGKRLRPVMCLISAEAVGGDVESVIPAAVAIETIHNFT 78

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDD+  MD   +RRG PTVH+ YDE TAI+AG+ L   AF+I+SS   + ++ +++  
Sbjct: 79  LIHDDI--MDRDELRRGVPTVHVAYDEPTAILAGDTLFAEAFKILSSCNVEAENLVKASR 136

Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           ML+   ++ ++ +  GQ LD+   + E I E++   + + KT  L+  AC   A++    
Sbjct: 137 MLA---DVCIE-ICEGQYLDMSFEKREKISESEYLEMVRKKTAVLIASACAMPAVLFGMD 192

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
              K  L  FG   GI FQ+ DD+LD
Sbjct: 193 SYAK-ALWNFGIYSGIGFQIHDDVLD 217


>gi|254501471|ref|ZP_05113622.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
 gi|222437542|gb|EEE44221.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
          Length = 289

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 18/226 (7%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALL-GGKKIRSFLVTECA-SLFNVN 68
           S RI+T +     QTA    T +    +L  A++YA+  GG +IR  L    + +  + +
Sbjct: 4   SDRIETGM-----QTAIRYATANGCPQKLGKALKYAVFPGGARIRPRLCLAVSQACGDKD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     AIE +HC SL+HDDLP  DN   RRGKP+VH +Y E  A++ G+GL+  AF
Sbjct: 59  PRVANACATAIELLHCASLVHDDLPCFDNAATRRGKPSVHKEYGEEIALLVGDGLIVTAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           E ++       +   ++L+ ++ + +G   G++ GQ  + +++      +    + KT +
Sbjct: 119 ETLARETLHAPEQT-ARLVATIANAVGSPYGIVAGQAWESEEKI----NITAYHRAKTAS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A  +GA+ ++ +  +        + LG  +Q+ADDL D  +D
Sbjct: 174 LFTGAVSAGALSSYGNPLD---WYALADALGAAYQVADDLYDAMDD 216


>gi|62959237|gb|AAY23726.1| farnesyl diphosphate synthase [Bacillus sp. JL-537]
          Length = 145

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP++    +RRGKPT H  Y E   I+AG+ LL+YAFE ++       + +  Q+++
Sbjct: 1   HDDLPALQVDDLRRGKPTNHKVYGEDITILAGDALLSYAFEYVARTPDIPAERLL-QVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ+ D++ E   +  V     I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVADLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|323475387|gb|ADX85993.1| farnesyltranstransferase [Sulfolobus islandicus REY15A]
          Length = 331

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 117/220 (53%), Gaps = 11/220 (5%)

Query: 16  IDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT 71
           + +  +D++     H++   + N R L    + L   GGK++R  ++   + L   +   
Sbjct: 5   LSSYFNDIVNNVNFHIKNFVKSNVRTLEEASFHLFTAGGKRLRPLILVSSSDLIGGDRQR 64

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG+ L   AFE +
Sbjct: 65  AYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAGDYLHAKAFEAL 122

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMC 190
           +     L  +   +      ++I +  +  GQ +D+  E  +D T+   +Q +K    M 
Sbjct: 123 NEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEYVQMIKGKTAML 180

Query: 191 FACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           F+C +  G I+  AS +  + L  +G NLGI FQ+ DD+L
Sbjct: 181 FSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDIL 220


>gi|307706648|ref|ZP_07643455.1| geranyltranstransferase [Streptococcus mitis SK321]
 gi|307618103|gb|EFN97263.1| geranyltranstransferase [Streptococcus mitis SK321]
          Length = 291

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLALEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|315613297|ref|ZP_07888206.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296]
 gi|315314532|gb|EFU62575.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296]
          Length = 291

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYSLIA--QADLPSQIKVNLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|255520793|ref|ZP_05388030.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
           J1-175]
          Length = 157

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 4/147 (2%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           ++D+ L +  S    +   RL  ++ Y++  GGK+IR  LV        VN L  ++   
Sbjct: 14  VIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTAT 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I++  +  
Sbjct: 72  ALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDE-N 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           L    R  L+  ++ + G +GM+GGQ+
Sbjct: 131 LSFETRIALINQISFSSGAEGMVGGQL 157


>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
 gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
          Length = 361

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 16/206 (7%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RYALL GGK++R  L     ++       A+   AA+E +H  SL+HDDLP MD+  +
Sbjct: 92  AMRYALLAGGKRVRPALCLAACAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDL 151

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLT 151
           RRGKPT H+ Y E  A++AG+ LL+ +F  ++S         P+      +R+  +  L 
Sbjct: 152 RRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPAVDPEKHPARVVRA--IGELA 209

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEK 207
             IG +G++ GQ++D++     +T        I   KT AL+  +   GAI+   +  + 
Sbjct: 210 RCIGSEGLVAGQVVDLEMTGTSQTVPLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQI 269

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E LR +  ++G++FQ+ DD+LD  + 
Sbjct: 270 EALRKYARSIGLLFQVVDDILDVTKS 295


>gi|218128733|ref|ZP_03457537.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697]
 gi|217989188|gb|EEC55503.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697]
          Length = 324

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   + Y L +GGK+IR  L+    +L+  +  +       IE  H Y+L+HDDL  MD 
Sbjct: 27  LYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPATGIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
              RRGK TVH  +++  AI++G+ +L  A++ ++  P   LK+ +    + SLT    L
Sbjct: 85  ADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPVGHLKEVMD---LFSLT---AL 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ +D++ E    + E +   + ++KT  L+  + + GA++  AS  + ERL  F
Sbjct: 139 E-ICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASAEDAERLYDF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GVNMGVAFQLKDDLLDVYGD 217


>gi|15232010|ref|NP_189747.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75263903|sp|Q9LHR4|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
           chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
           AltName: Full=Dimethylallyltranstransferase 12; AltName:
           Full=Farnesyl diphosphate synthase 12; AltName:
           Full=Farnesyltranstransferase 12; AltName:
           Full=Geranyltranstransferase 12; Flags: Precursor
 gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
 gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
          Length = 360

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 11/200 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MD+  +
Sbjct: 96  AVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADL 155

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  + E  A++AG+ LL  AFE   ++SS     +  IRS  +  L   IG +
Sbjct: 156 RRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRS--VTELAKAIGTK 213

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQ+ D+  + ++   V +     I   KT AL+  A   GAI+   ++ E ++LR 
Sbjct: 214 GLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRK 273

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +G  +G++FQ+ DD++D  E
Sbjct: 274 YGRCIGLLFQVVDDIIDVTE 293


>gi|15901068|ref|NP_345672.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4]
 gi|111657819|ref|ZP_01408536.1| hypothetical protein SpneT_02001001 [Streptococcus pneumoniae
           TIGR4]
 gi|148998635|ref|ZP_01826074.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70]
 gi|168577215|ref|ZP_02723024.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae MLV-016]
 gi|182684065|ref|YP_001835812.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14]
 gi|225860956|ref|YP_002742465.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230892|ref|ZP_06964573.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254303|ref|ZP_06977889.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502796|ref|YP_003724736.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|303254296|ref|ZP_07340405.1| geranyltranstransferase [Streptococcus pneumoniae BS455]
 gi|303258839|ref|ZP_07344818.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293]
 gi|303261523|ref|ZP_07347470.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292]
 gi|303264193|ref|ZP_07350113.1| geranyltranstransferase [Streptococcus pneumoniae BS397]
 gi|303266176|ref|ZP_07352069.1| geranyltranstransferase [Streptococcus pneumoniae BS457]
 gi|303268097|ref|ZP_07353897.1| geranyltranstransferase [Streptococcus pneumoniae BS458]
 gi|307067855|ref|YP_003876821.1| geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae
           AP200]
 gi|14972686|gb|AAK75312.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4]
 gi|147755472|gb|EDK62520.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70]
 gi|182629399|gb|ACB90347.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14]
 gi|183577213|gb|EDT97741.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae MLV-016]
 gi|225727927|gb|ACO23778.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238391|gb|ADI69522.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|301801934|emb|CBW34659.1| putative geranyltranstransferase [Streptococcus pneumoniae INV200]
 gi|302598790|gb|EFL65827.1| geranyltranstransferase [Streptococcus pneumoniae BS455]
 gi|302637103|gb|EFL67591.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292]
 gi|302639782|gb|EFL70238.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293]
 gi|302642314|gb|EFL72661.1| geranyltranstransferase [Streptococcus pneumoniae BS458]
 gi|302644346|gb|EFL74600.1| geranyltranstransferase [Streptococcus pneumoniae BS457]
 gi|302646005|gb|EFL76232.1| geranyltranstransferase [Streptococcus pneumoniae BS397]
 gi|306409392|gb|ADM84819.1| Geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae
           AP200]
 gi|327389445|gb|EGE87790.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA04375]
          Length = 291

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
            ++ +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DSYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|317475481|ref|ZP_07934744.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908312|gb|EFV30003.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 324

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   + Y L +GGK+IR  L+    +L+  +  +       IE  H Y+L+HDDL  MD 
Sbjct: 27  LYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPATGIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
              RRGK TVH  +++  AI++G+ +L  A++ ++  P   LK+ +    + SLT    L
Sbjct: 85  ADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPVGHLKEVMD---LFSLT---AL 138

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ +D++ E    + E +   + ++KT  L+  + + GA++  AS  + ERL  F
Sbjct: 139 E-ICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASLKIGALLGGASAEDAERLYDF 197

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 198 GVNMGVAFQLKDDLLDVYGD 217


>gi|15222767|ref|NP_175376.1| GGPS6 (geranylgeranyl pyrophosphate synthase 6);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|85540951|sp|O22043|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
           mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
           AltName: Full=Dimethylallyltranstransferase 6; AltName:
           Full=Farnesyl diphosphate synthase 6; AltName:
           Full=Farnesyltranstransferase 6; AltName:
           Full=Geranyltranstransferase 6; Flags: Precursor
 gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
 gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
 gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
          Length = 336

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 9/197 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY LL GGK++R  L      L      TA+    A+E IH  SLI DDLP MD+  +
Sbjct: 70  AMRYTLLPGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSL 129

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRGKPT H  + E T+I+A N L + A  + ++S    +      + +  +   +G +G+
Sbjct: 130 RRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGL 189

Query: 160 LGGQMLDIQDEFI------DETQVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           + GQ  D+  E +      DE +   ++   KT  L+  A   GAIM   S  E ERL+ 
Sbjct: 190 VAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKS 249

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 250 YARCVGLMFQVMDDVLD 266


>gi|307565038|ref|ZP_07627551.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
 gi|307346207|gb|EFN91531.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
          Length = 324

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 15/226 (6%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +S +I +I+++ +   A   + +    L   I+Y L LGGK+IR  L+    +++  +  
Sbjct: 3   SSDKIFSIINNYIATLAYDREPK---SLYEPIKYVLSLGGKRIRPVLMLLAYNMYKDDPE 59

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           + L     +E  H Y+L+HDDL  MD+  +RRG  TVH +++  TAI++G+ +L  AFE 
Sbjct: 60  SILNQACGLETYHNYTLLHDDL--MDSAPLRRGHQTVHEKWNANTAILSGDTMLVLAFER 117

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187
           I+            + +L L     L+ +  GQ LD++ E    + E +   + ++KT  
Sbjct: 118 ITRGNPSC-----LKALLDLFTVTALE-IGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSV 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  A + GA++ +AS+ +   L  FGE +G+ FQL DD LD   D
Sbjct: 172 LLACALKMGAMLGNASEKDANNLYLFGEKIGLAFQLQDDYLDVYGD 217


>gi|194396799|ref|YP_002037809.1| geranyltranstransferase [Streptococcus pneumoniae G54]
 gi|194356466|gb|ACF54914.1| geranyltranstransferase [Streptococcus pneumoniae G54]
          Length = 291

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
            ++ +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DSYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQXLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|153004002|ref|YP_001378327.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027575|gb|ABS25343.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 299

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 124/232 (53%), Gaps = 17/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN- 66
           +Q   + +   L+  L   A   + Q  +RL+ AIRYALLGG K++R  LV         
Sbjct: 13  IQSYLRSVTERLEPRLAALADERRGQGPERLVEAIRYALLGGGKRLRPALVLAACEAHGG 72

Query: 67  --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +   A+R   A+E +H YSL+HDDLP+MD+  +RRG+PTVH  YDE TA++ G+ L 
Sbjct: 73  DASDGSLAMRFAVALEAVHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEATAVLVGDALQ 132

Query: 125 TYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           + AF  ++++P+        + L   L  N  L  M+ GQ  DIQ E   + E +V  + 
Sbjct: 133 SLAFRHLLAAPQPTA-----AALARLLAENAYL--MVEGQARDIQGEHARLAEAEVLELM 185

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KTGAL+  A   GA  A A+          G  LG+ FQ+ADDLLD   D
Sbjct: 186 RTKTGALLASAVAGGAACAGAAVEAVY---PIGLKLGLAFQIADDLLDLTAD 234


>gi|298206983|ref|YP_003715162.1| putative isoprenoid biosynthesis related protein [Croceibacter
           atlanticus HTCC2559]
 gi|83849617|gb|EAP87485.1| putative isoprenoid biosynthesis related protein [Croceibacter
           atlanticus HTCC2559]
          Length = 324

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 13/227 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + I +  +  +    S +  +  + L   I Y L LGGK++R  LV     +F  ++   
Sbjct: 2   QEISSYREAFIAHMNSKVSVKEPENLYEPISYILNLGGKRLRPILVLMATEIFGEDYTKG 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E  H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++  
Sbjct: 62  LDAALAVEVFHNFSLVHDDI--MDDAPLRRGKDTVHEKWDLNTGILSGDAMLINAYQLFE 119

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALM 189
           +      D    + +  L     ++ +  GQ  DI  E  D+  +    KM   KT  L+
Sbjct: 120 N-----YDGSTFKELAKLFTKTAIE-VCEGQQYDIDFETRDDVTIPEYLKMIEFKTAVLV 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A + GAI+A+A  + K+++  FG  LG+ FQL DD LD   D PK
Sbjct: 174 GAALQMGAIVANAEDSCKDKIYEFGCLLGLAFQLQDDYLDAFGD-PK 219


>gi|332200654|gb|EGJ14726.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA41317]
          Length = 291

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
            ++ +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DSYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|149008192|ref|ZP_01831697.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74]
 gi|225858990|ref|YP_002740500.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae 70585]
 gi|307127203|ref|YP_003879234.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B]
 gi|147760373|gb|EDK67353.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74]
 gi|225720031|gb|ACO15885.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae 70585]
 gi|306484265|gb|ADM91134.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B]
 gi|332074540|gb|EGI85014.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA17545]
          Length = 291

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
            ++ +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DSYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 360

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 11/200 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK++R  L      L   +  TA+    A+E IH  SLIHDDLP MD+  +
Sbjct: 96  AVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADL 155

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRGKPT H  + E  A++AG+ LL  AFE   ++SS     +  IRS  +  L   IG +
Sbjct: 156 RRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRS--VTELAKAIGTK 213

Query: 158 GMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G++ GQ+ D+  + ++   V +     I   KT AL+  A   GAI+   ++ E ++LR 
Sbjct: 214 GLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRK 273

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +G  +G++FQ+ DD++D  E
Sbjct: 274 YGRCIGLLFQVVDDIIDVTE 293


>gi|332829987|gb|EGK02615.1| hypothetical protein HMPREF9455_00865 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 326

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 111/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L     +L+  +    + +  AIE  H ++L+HDDL  MD 
Sbjct: 31  LFDPITYILSLGGKRVRPALALMSYNLYKEDVERVIPIALAIEVFHNFTLLHDDL--MDR 88

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGKPTVHI++++ TA+++G+ +L  A+ EI  +   QL        +L L      
Sbjct: 89  ADMRRGKPTVHIRWNDNTAVLSGDAMLIEAYKEIAKTDSEQL------PRVLDLFSETAT 142

Query: 157 QGMLGGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ  D++ ++ +D T  +   + ++KT  L+  A + GAI+A A   + + L  F
Sbjct: 143 E-ICCGQQYDMEFEQRLDVTIPEYLEMIRLKTAVLLGCALKEGAIVAGAPDADADNLYEF 201

Query: 214 GENLGIIFQLADDLLDCEED 233
           G N+G+ FQL DDLLD   D
Sbjct: 202 GINVGLGFQLKDDLLDVYGD 221


>gi|331266229|ref|YP_004325859.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5]
 gi|326682901|emb|CBZ00518.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5]
          Length = 291

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 14/205 (6%)

Query: 36  NDRLLSAIRYALL-----GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIH 89
           + +  S++R A+L     GGK+IR FL+ E     +V    A  +V AA+E IH  SLIH
Sbjct: 20  DQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLHVTIRPAHAQVAAALEMIHTGSLIH 79

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MD+   RRG+ T H ++ E  AI+AG+ L    + +I+  +  L   I+  L+ +
Sbjct: 80  DDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIA--QADLPSQIKVDLIAN 137

Query: 150 LTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           L+   G  GM+ GQ+LD++ E     ++E Q   I   KTG L+ +  ++ AI+A  +  
Sbjct: 138 LSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IHANKTGKLLAYPFQAAAIIAELAPE 195

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
            + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 196 IQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|270339768|ref|ZP_06005968.2| polyprenyl synthetase [Prevotella bergensis DSM 17361]
 gi|270333767|gb|EFA44553.1| polyprenyl synthetase [Prevotella bergensis DSM 17361]
          Length = 325

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 120/222 (54%), Gaps = 18/222 (8%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D++L +  S ++    DR    L   ++Y L +GGK+IR  L+    +L+  +  + L  
Sbjct: 6   DEILQKINSFIEQLPYDRTPAALYEPVKYVLSMGGKRIRPTLMLLGYNLYKDDPESILMQ 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSP 134
              +E  H Y+L+HDDL  MDN  +RRG  TVH +++   A+++G+ +L  A++ ++  P
Sbjct: 66  AVGLETYHNYTLLHDDL--MDNADLRRGHETVHKKWNANQAVLSGDSMLVLAYQRMMDCP 123

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
             +L      + +L L     L+ +  GQ  DI  E    + E +   + ++KT  L+  
Sbjct: 124 VDKL------EKVLGLFTETALE-IGEGQQYDIDFEMRNDVSEDEYIEMIRLKTSVLLAC 176

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A + GAI+A AS ++ ++L  FGE +G+ FQL DD LD   D
Sbjct: 177 ALKIGAILAGASPSDADKLYKFGEKMGLAFQLQDDYLDVYGD 218


>gi|45357608|ref|NP_987165.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanococcus maripaludis S2]
 gi|45047168|emb|CAF29601.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanococcus maripaludis S2]
          Length = 317

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 116/206 (56%), Gaps = 24/206 (11%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDD 91
           + + +L  A ++ LL GGK++R +L      L   + LT +   A ++E IH Y+L+HDD
Sbjct: 20  EKDTKLYGASKHLLLAGGKRVRPYLSI-LTYLLKKDELTEIMAPALSVELIHNYTLVHDD 78

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MDN   RRG PTVH  Y E  AI+AG+ L   AFE +S+    ++D+ ++  +L + 
Sbjct: 79  I--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAFEALSN----IEDSNKAHEVLKVL 132

Query: 152 HNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               ++ +  GQ  D++        DE+++     MI K KTGAL+    E GA+MA  +
Sbjct: 133 SKACVE-VCEGQTEDMEFEERFPTLDEYLE-----MISK-KTGALIVAPVEIGAVMADCT 185

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
             E+E L  + + +G+ FQ+ DD+LD
Sbjct: 186 PEEREALCNYAKRIGMTFQIQDDVLD 211


>gi|322375371|ref|ZP_08049884.1| geranyltranstransferase [Streptococcus sp. C300]
 gi|321279634|gb|EFX56674.1| geranyltranstransferase [Streptococcus sp. C300]
          Length = 291

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|307703537|ref|ZP_07640479.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
 gi|307622944|gb|EFO01939.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
          Length = 291

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLF 65
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E   SL 
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLK 55

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V      +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VVIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQA--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A      + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|253578524|ref|ZP_04855796.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850842|gb|EES78800.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 295

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 115/197 (58%), Gaps = 6/197 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+ Y++L GGK++R  L+ E   LF+          A +E IH +SLIHDDLP++D+
Sbjct: 32  MAQAMNYSMLAGGKRLRPMLIRETYRLFDGKEEVVKPFMAGMEMIHTHSLIHDDLPALDD 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIG 155
              RRG+ T H  Y E   +++G  LL YA+E +  +   T+ +D +   L + ++   G
Sbjct: 92  DDYRRGRLTTHKVYGEAMGVLSGVALLNYAYETMFQAFALTKEQDRVIHALRV-VSQKTG 150

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + GMLGGQ +D++++   +++  +  I + KT AL+  +  +GAI+A A++ E   +   
Sbjct: 151 IHGMLGGQSVDVENDGKPLEKEMLDYIYRNKTSALIEASMMTGAILAGANEQEVSAVEKA 210

Query: 214 GENLGIIFQLADDLLDC 230
             N+G+ FQ+ DD+LD 
Sbjct: 211 AGNIGLAFQIQDDILDV 227


>gi|148257671|ref|YP_001242256.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|146409844|gb|ABQ38350.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 289

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 108/199 (54%), Gaps = 11/199 (5%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95
           RL +A++ A+   G ++R  L    A+    +   A    G+AIE +HC SL+HDDLP  
Sbjct: 26  RLSAAMQAAVFPKGARVRPRLCHAVAAACGDDEPAATDAAGSAIELLHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+P+VH  + E  A++AG+ L+  AF+ ++  K++      +QL+ ++   +G
Sbjct: 86  DNAKLRRGRPSVHAAFGEPLAVLAGDALIVLAFQTLA--KSRCSPLRLAQLIATIGDAVG 143

Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  G+  GQ  + + E ID +      + KTGAL  FA  + +  A A     E  R  G
Sbjct: 144 VPHGIAAGQAWECEPE-IDLSH---YHRSKTGAL--FAAATVSGAAAAGHANPEAWRSLG 197

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G  +Q+ADD+ D   D
Sbjct: 198 EKIGEAYQVADDIRDAASD 216


>gi|293365584|ref|ZP_06612293.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
 gi|291315952|gb|EFE56396.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
          Length = 291

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLF 65
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E   SL 
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLK 55

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V      +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VVIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A      + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|312867098|ref|ZP_07727308.1| geranyltranstransferase [Streptococcus parasanguinis F0405]
 gi|311097227|gb|EFQ55461.1| geranyltranstransferase [Streptococcus parasanguinis F0405]
          Length = 291

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 94/164 (57%), Gaps = 4/164 (2%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            +V  A+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L    F +I+
Sbjct: 63  FQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDALFLDPFGMIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190
           +  + L D ++  L+L L+   G +GM+ GQ+LD++ E    T  ++  I   KTG L+ 
Sbjct: 123 A--SALPDVVKVSLILELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGRLLA 180

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +   +  ++     +  + L+  G+ LG+ FQ+ DD+LD   D 
Sbjct: 181 YPFIAAGLILELQADIAQLLKKIGKKLGLAFQVRDDILDLVADF 224


>gi|325846498|ref|ZP_08169413.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481256|gb|EGC84297.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 279

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 15/227 (6%)

Query: 12  NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           N K  D IL  D  ++  A   +   ++ L  A+ YA   GK+IR  +  E   +   + 
Sbjct: 5   NKKEFDRILNTDKKIIDQAMKEKFVGDNPLNEALVYASDSGKRIRPIVFLETCRMLLGDK 64

Query: 70  L--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           L    +    ++E +H YSL+HDD+P MDN   RRGK TVH ++ E  AI+ G+ LL++A
Sbjct: 65  LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124

Query: 128 FEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQK 182
           FE I      L  +I  Q  L     L    G  GM+ GQ+ DI+ ++  + + +  + K
Sbjct: 125 FENI------LNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYK 178

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   A     +       + E+L  +   LG+ FQL DD+LD
Sbjct: 179 NKTSRLFMAALMMAGLYCQLDDEKLEKLENYAYYLGMAFQLQDDILD 225


>gi|163753596|ref|ZP_02160719.1| putative isoprenyl synthetase [Kordia algicida OT-1]
 gi|161325810|gb|EDP97136.1| putative isoprenyl synthetase [Kordia algicida OT-1]
          Length = 324

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 16/201 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L    A +F  +   AL    A+E  H +SL+HDD+  MD+
Sbjct: 27  LYEPIIYILQLGGKRLRPVLTLMTAEIFGASPQKALDAALAVEVFHNFSLVHDDI--MDD 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGK TVH ++D  T I++G+ +L  A+        QL +N + +   +L       
Sbjct: 85  APLRRGKETVHEKWDINTGILSGDAMLILAY--------QLFENYKGKTFRALAELFSKT 136

Query: 158 GM--LGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212
            +    GQ  DI  E  ++  +    KM   KT  L+  A + GA++A AS+ + + +  
Sbjct: 137 AIEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVGAAMKMGALVAEASEKDAQGIYD 196

Query: 213 FGENLGIIFQLADDLLDCEED 233
           FG  LG+ FQL DD LD   D
Sbjct: 197 FGRYLGLAFQLQDDYLDAYGD 217


>gi|88801902|ref|ZP_01117430.1| putative isoprenoid biosynthesis related protein [Polaribacter
           irgensii 23-P]
 gi|88782560|gb|EAR13737.1| putative isoprenoid biosynthesis related protein [Polaribacter
           irgensii 23-P]
          Length = 340

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 17/204 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK+IR  L    + +F+ +   AL    A+E  H ++L+HDD+  MD 
Sbjct: 43  LYEPIDYILKLGGKRIRPVLTLMVSDIFSGDFKKALPAALAVEVFHNFTLVHDDI--MDA 100

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH ++D    I++G+ +L  A++   +      D+I    +  L     L+
Sbjct: 101 APLRRGKPTVHEKWDTNRGILSGDAMLILAYQYFEN-----YDSIVFLKLAKLFSKTALE 155

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQNEKERLRC 212
            +  GQ LD+  +F   + V + +     ++KT  L+  A + GAI+A  S    + +  
Sbjct: 156 -VCDGQQLDV--DFETRSNVTIPEYINMIRLKTSVLVAAALKMGAIVAETSDENAQLIYD 212

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           FG NLG+ FQL DD LD   D PK
Sbjct: 213 FGLNLGLAFQLQDDYLDTFGD-PK 235


>gi|148989224|ref|ZP_01820604.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73]
 gi|147925202|gb|EDK76281.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73]
          Length = 291

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|63034220|gb|AAY28422.1| geranylgeranyl diphosphate synthase [Paracoccus haeundaensis]
          Length = 293

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 2/188 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           AL  G++ R  L+   A        T +    A+E +H  SLI DDLP MD+  +RRG+P
Sbjct: 39  ALSSGRRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAGLRRGRP 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             H+ + E  A++ G  L+T A  +++  +      +R+QL+  L+ ++G QG+  GQ L
Sbjct: 99  ATHVAHGESRAVLGGIALITEAMALLAGARGA-SGTVRAQLVRILSRSLGPQGLCAGQDL 157

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+     +   V   Q +KTG L     E  A++      E+ ++  FG  LG +FQ  D
Sbjct: 158 DLH-AAKNGAGVEQEQDLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGRVFQSYD 216

Query: 226 DLLDCEED 233
           DLLD   D
Sbjct: 217 DLLDVVGD 224


>gi|78187619|ref|YP_375662.1| geranyltranstransferase [Chlorobium luteolum DSM 273]
 gi|78167521|gb|ABB24619.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Chlorobium luteolum DSM 273]
          Length = 330

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 16/197 (8%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +  RY L G GK+IR FL    +   + N   AL+V  A+E +H ++L+HDD+  MD 
Sbjct: 35  LYAPARYILEGKGKRIRPFLTLLASEAVSGNSENALKVALAVEVLHNFTLMHDDI--MDE 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGL 156
             +R  +PTVH +++   AI++G+ ++ YA+E+    ++        +L+  L H NI +
Sbjct: 93  AELRHNRPTVHREWNANVAILSGDMMIAYAYELALEAESHR----HCELIHILNHANITI 148

Query: 157 QGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
                GQ LD++ E   +  +     MI K KTG L+  A E+G + A A++ + + L  
Sbjct: 149 ---CEGQALDMELEEKQDATIADYLDMISK-KTGRLISAALEAGGVSADATREQLQSLVL 204

Query: 213 FGENLGIIFQLADDLLD 229
           FGE +G  FQ+ DD LD
Sbjct: 205 FGEKIGRAFQIQDDYLD 221


>gi|222099500|ref|YP_002534068.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359]
 gi|221571890|gb|ACM22702.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359]
          Length = 272

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 17/195 (8%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           SA++Y++  GGK+IR  LV        V     + V  A+E  H  SL+HDDLP +DN  
Sbjct: 24  SAMQYSVTAGGKRIRPLLVLTVGEDIGVEEERLVDVAVAVELFHTASLVHDDLPPIDNAD 83

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRGKP+ H  Y E  A++AG+GL   AF  I+         +R   +         + +
Sbjct: 84  FRRGKPSCHRAYGEGIALLAGDGLFFLAFSQIA--------KVREPKLFEEFSETAYK-L 134

Query: 160 LGGQMLDIQDEFID-ETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           L G+ +D++ E  + E  V M++KM   KTGAL  F C S   +     +    ++  GE
Sbjct: 135 LLGEAMDVEFERQEKEISVEMVEKMYSFKTGALFAF-CFSAPFLLKGLDH--TFVKKLGE 191

Query: 216 NLGIIFQLADDLLDC 230
             G+ FQ+ DDL D 
Sbjct: 192 KFGVAFQIYDDLKDV 206


>gi|212550849|ref|YP_002309166.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549087|dbj|BAG83755.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 321

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + GK+IR         LF  N   A+ V  A E  H ++L+HDD+  +DN ++RRG+ TV
Sbjct: 36  MKGKRIRPIFTLMACRLFQENIKCAIDVALAWEIFHNFTLMHDDI--IDNAFLRRGQSTV 93

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++++  A++AG+ +L  A++ I+    Q +D     ++L L  +I  + +  GQ  D+
Sbjct: 94  HTKWNKTIALLAGDSMLILAYKYIAKSPLQYRD-----ILLHLFSSIAAK-VCEGQAYDM 147

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             E    + + +   + ++KT  L+     SGAI+  AS  + + L+ FG NLGI FQ+ 
Sbjct: 148 LLENRLDVRKKEYLELVRLKTATLLSACLYSGAIVGGASGQDAKFLQDFGINLGIAFQIQ 207

Query: 225 DDLLD 229
           DD+LD
Sbjct: 208 DDMLD 212


>gi|149202083|ref|ZP_01879056.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035]
 gi|149144181|gb|EDM32212.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035]
          Length = 304

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 13/200 (6%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           Q   RL  A+ Y+   GG +IR  ++   A +  +     +    AA+E +HC SL+HDD
Sbjct: 37  QTPARLADALDYSTSPGGARIRPTILMSVALACGDDRPELSDAAAAALEIMHCASLVHDD 96

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ-LMLSL 150
           LP  D+  +RRGKP+VH  Y E  A++AG+ L+  +FEI++  +    D  R+  L+L+L
Sbjct: 97  LPCFDDADLRRGKPSVHRAYSEPLAVLAGDALIIMSFEILA--RVAECDAARANALILAL 154

Query: 151 THNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               G+  G+  GQ    + E   + + +   + KTGAL   A + GAI   A+ +E E 
Sbjct: 155 ARRSGMPNGICAGQ--GWESEPTVDLEAY--HRSKTGALFIAATQMGAI---AAGHEPEP 207

Query: 210 LRCFGENLGIIFQLADDLLD 229
               G  +G  FQ+ADDL D
Sbjct: 208 WYELGARIGAAFQVADDLRD 227


>gi|301794294|emb|CBW36718.1| putative geranyltranstransferase [Streptococcus pneumoniae INV104]
          Length = 291

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|192361220|ref|YP_001981260.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107]
 gi|190687385|gb|ACE85063.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107]
          Length = 320

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A          L + A IE IH  +L+HDD+  M    +RRG+PT +
Sbjct: 41  GGKRLRPLLVMLAAKSLGYTGKQHLDLAAIIEFIHTATLLHDDVVDMSQ--LRRGRPTAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+    +++ G+ L + AF+++ +  +     +    +LS T N   +G +  Q+++ +
Sbjct: 99  AQWGNAPSVLVGDFLYSRAFQMMVAIGS-----MDVMAILSDTTNTIAEGEVQ-QLVNAK 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E   F +   KT  L   ACE G ++A A+  ++E LR +G ++GI FQL DD L
Sbjct: 153 DPNVTEENYFQVIDKKTAILFSAACEVGGVIAGANTRQREALRHYGSHVGIAFQLVDDAL 212

Query: 229 DCEED 233
           D   D
Sbjct: 213 DYTGD 217


>gi|189461913|ref|ZP_03010698.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136]
 gi|189431307|gb|EDV00292.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136]
          Length = 327

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 19/203 (9%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L+    +LF  +        AAIE  H ++L+HDDL  MD 
Sbjct: 29  LYDPIEYVLGLGGKRLRPVLMLLAYNLFKEDVQAIFSQAAAIETYHNFTLLHDDL--MDK 86

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHN 153
             +RRGKPTVH ++DE TAI++G+ +L  +F+ +        T    +I S+  L +   
Sbjct: 87  ADMRRGKPTVHKKWDENTAILSGDAMLILSFQFMMQGCPVEYTHQVMDIFSRTALEVC-- 144

Query: 154 IGLQGMLGGQMLDIQDEFIDETQV--FM-IQKMKTGALMCFACESGAIMAHASQNEKERL 210
                   GQ  D++ E  ++  V  +M + ++KT  L+  A + GA++  AS+ + + L
Sbjct: 145 -------DGQQWDMEFESREDVTVDEYMEMIRLKTSVLLAGALKIGAVLGGASEKDAQLL 197

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             FG  +G+ FQL DD LD   D
Sbjct: 198 YDFGIQIGLAFQLQDDYLDVYGD 220


>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
           DSM 4136]
          Length = 295

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 11/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L S L +    +D  LD  +    +   T H      A+R++L  GGK++R  L  
Sbjct: 1   MSADLKSYLTQRVAFVDAALDRFVAAAETRPVTIHK-----AMRHSLFAGGKRLRPILCL 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   AL    A+EC+H YSLIHDDLP MD+  +RRG PT H  + E  A++A
Sbjct: 56  AAAEACGGSLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLA 115

Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L   +FE+++ +P T       + ++L L    G   ++GGQ+ D++ E   +    
Sbjct: 116 GDALQALSFELVAQTPVTHRHSP--AAMVLELARTAGSLHLVGGQVADLEGEGKKLGIED 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I + KT AL+  + + G + A A  ++ + L  FG   G+ FQ+ DD+LD  +   K
Sbjct: 174 LRYIHESKTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEK 233


>gi|15897028|ref|NP_341633.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
           solfataricus P2]
 gi|284173372|ref|ZP_06387341.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
           solfataricus 98/2]
 gi|14423727|sp|P95999|GGPS_SULSO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase
 gi|13813193|gb|AAK40423.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
           solfataricus P2]
 gi|261601682|gb|ACX91285.1| Dimethylallyltranstransferase [Sulfolobus solfataricus 98/2]
          Length = 332

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 7/183 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   + L   +   A +  AA+E +H ++L+HDD+  MDN  +RRG PTVH
Sbjct: 43  GGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +++ E  AI+AG+ L   AFE ++     L  N   +       +I +  +  GQ +D+ 
Sbjct: 101 VKWGEPMAILAGDYLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEI--ISEGQAMDMS 158

Query: 169 DE-FIDETQVFMIQKMKTGALMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +D T+   IQ +K    M F+C +  G I+  A+ +  ++L  +G NLGI FQ+ D
Sbjct: 159 FENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVD 218

Query: 226 DLL 228
           D+L
Sbjct: 219 DIL 221


>gi|5912297|emb|CAB56064.1| geranylgeranyl pyrophosphate synthase [Paracoccus marcusii]
          Length = 291

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 2/194 (1%)

Query: 40  LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           L A   AL  GK+ R  L+   A        T +    A+E +H  SLI DDLP MD+  
Sbjct: 31  LGAAMAALSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAG 90

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+P  H+ + E  A++ G  L+T A  +++  +      +R+QL+  L+ ++G QG+
Sbjct: 91  LRRGQPATHVAHGESRAVLGGIALITEAMALLAGARGA-SGTVRAQLVRILSRSLGPQGL 149

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             GQ LD+     +   V   Q +KTG L     E  A++      E+ ++  FG  LG 
Sbjct: 150 CAGQDLDLH-AAKNGAGVEQEQDLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGR 208

Query: 220 IFQLADDLLDCEED 233
           +FQ  DDLL+   D
Sbjct: 209 VFQSYDDLLEVVGD 222


>gi|89889496|ref|ZP_01201007.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
 gi|89517769|gb|EAS20425.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
          Length = 327

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 18/209 (8%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S +  Q    L   + Y L LGGK++R  L    A ++      A+    A+E  H ++L
Sbjct: 17  SRVTAQEPASLYDPVHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAIAVEVFHNFTL 76

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRS 144
           +HDD+  MD+  +RRGK TVH+++D  T I++G+ +L  A+++ +S  P+T    + + S
Sbjct: 77  LHDDI--MDDADLRRGKETVHVKWDVNTGILSGDAMLIMAYQLFNSYDPETFYWLNQVFS 134

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAH 201
           +  L +           GQ  D+  E  D+   ++   + K+KT  L+  A + GAI+A 
Sbjct: 135 KTALEVCE---------GQQYDVDFETRDDVTISEYINMIKLKTSVLVGCALQMGAIIAG 185

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ++ E++ +  +G N+G+ FQL DD LD 
Sbjct: 186 VNKKEQQLIYDYGINIGLAFQLMDDYLDA 214


>gi|260431561|ref|ZP_05785532.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415389|gb|EEX08648.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 332

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 9/206 (4%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + M ++H  R+     + +  GGK++R  L    A LF       +R+ A +E IH  +L
Sbjct: 30  TRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLFGYGGDHHIRLAATVEFIHTATL 89

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D    RRG+PT ++ +D  ++++ G+ L + +F+++    +    +I +   
Sbjct: 90  LHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANAS 147

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            ++     LQ      M    D   DE     + + KT AL   A E G ++A AS+ + 
Sbjct: 148 ATIAEGEVLQ------MTAATDLRTDEAVYLQVVRGKTAALFSAATEVGGVIAGASEEQV 201

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +G+ LGI FQ+ADDLLD + D
Sbjct: 202 RALFAYGDALGIAFQIADDLLDYQGD 227


>gi|333023935|ref|ZP_08451999.1| PlaT4 [Streptomyces sp. Tu6071]
 gi|81250709|gb|ABB69754.1| PlaT4 [Streptomyces sp. Tu6071]
 gi|332743787|gb|EGJ74228.1| PlaT4 [Streptomyces sp. Tu6071]
          Length = 359

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 108/226 (47%), Gaps = 20/226 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-- 75
           T  DD L    +H    H     S +  A   GK +R+ L       F  +     RV  
Sbjct: 44  TRFDDRLRPMVAH----HFGWPSSDLPTATTSGKMVRATLTVLTGECFTTDAEAISRVTA 99

Query: 76  -GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            GAA+E IH +SLIHDD+  MD    RRG+P V  +Y    AI+ G+ LL  A  ++  P
Sbjct: 100 AGAAVEMIHNFSLIHDDV--MDGDRERRGRPAVWHEYGIPAAILTGDLLLAQAPLMLDGP 157

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCF 191
                 + R+  +L+      +  +  GQM D+  E   E    +   +   KTGAL+  
Sbjct: 158 WAA---DPRATRLLAE----AVARLAAGQMADLSLEGRPEASPDEALAVAADKTGALLAC 210

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           ACE GA++A AS+    R   FG  LG+ FQ+ADD+L    D P++
Sbjct: 211 ACELGALLAGASEEATRRFSRFGLRLGLAFQIADDILGIWGD-PRR 255


>gi|149002571|ref|ZP_01827503.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69]
 gi|237649510|ref|ZP_04523762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CCRI 1974]
 gi|237822542|ref|ZP_04598387.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CCRI 1974M2]
 gi|147759182|gb|EDK66175.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69]
          Length = 291

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPKMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|256752864|ref|ZP_05493702.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748241|gb|EEU61307.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 168

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 7/134 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A+RY++  GGK++R  L      L   +   AL V  AIE IH YSLIHDDLP+MDN
Sbjct: 30  IYEAMRYSVFAGGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--- 154
             +RRGKPT H  Y E  AI+AG+GLL   +E++   +  L+     + +L  T+ I   
Sbjct: 90  DDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLV--RHALEHPEDYERILKATNEIATA 147

Query: 155 -GLQGMLGGQMLDI 167
            G +G++GGQ++DI
Sbjct: 148 SGCKGIIGGQVVDI 161


>gi|148985099|ref|ZP_01818338.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71]
 gi|147922544|gb|EDK73662.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71]
 gi|301800132|emb|CBW32736.1| putative geranyltranstransferase [Streptococcus pneumoniae OXC141]
          Length = 291

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VTIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVGLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|332877798|ref|ZP_08445537.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684263|gb|EGJ57121.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 327

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 15/201 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L + IRY L +GGK+IR  L+    +L+            AIE  H Y+L+HDDL  MD 
Sbjct: 27  LYAPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEVIGSQAMAIEIYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIG 155
             +RRG  TVH ++D+  AI++G+ +L  A+  +    P  QL + +   L       IG
Sbjct: 85  ADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCPVEQLGNVM--GLFTETALEIG 142

Query: 156 LQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
                 GQ  DI+ E    + E +   + ++KT  L+  A + GA +  A + + E L  
Sbjct: 143 -----EGQQYDIEFETRADVSEEEYIEMIRLKTSVLLACALKIGAWLGDAPRQDAELLYR 197

Query: 213 FGENLGIIFQLADDLLDCEED 233
           FGENLG+ FQL DD LD   D
Sbjct: 198 FGENLGLAFQLQDDYLDVYGD 218


>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
 gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
          Length = 261

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 7/197 (3%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+RYA+ GG++           L       A+    A+E I     + DDLPS+D+  +R
Sbjct: 4   AMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSELR 63

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
            GKPTVH  +   TA+ AG  LL   FE +++   +   +  ++++  ++  IG  G+L 
Sbjct: 64  HGKPTVHRAFGIPTALFAGTALLALGFEHLAA---RYSGDTAARMVAEVSRAIGSTGLLA 120

Query: 162 GQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ +D+     D  ++   +  +   KT AL+  +  +GAI   AS+ E E LR +G   
Sbjct: 121 GQAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVT 180

Query: 218 GIIFQLADDLLDCEEDL 234
           G+++Q+ DD+ D  + +
Sbjct: 181 GLLYQIVDDVADATKTM 197


>gi|270641252|ref|ZP_06222125.1| geranyltranstransferase [Haemophilus influenzae HK1212]
 gi|270317343|gb|EFA28880.1| geranyltranstransferase [Haemophilus influenzae HK1212]
          Length = 220

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 7/151 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           + G    +L+E  +++ T ++  L      +++ HN  LL A+ YALL GGK++R FLV 
Sbjct: 75  LTGEQVDRLKEELQQVQTRINRFLEAQFEGIES-HNAPLLEAMEYALLLGGKRVRPFLVY 133

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+A
Sbjct: 134 ATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILA 193

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           G+ L ++AFEI++        NI S+  L+L
Sbjct: 194 GDALQSFAFEILTKTP-----NISSEQKLAL 219


>gi|15903130|ref|NP_358680.1| geranyltranstransferase [Streptococcus pneumoniae R6]
 gi|116516004|ref|YP_816536.1| geranyltranstransferase [Streptococcus pneumoniae D39]
 gi|169833983|ref|YP_001694642.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae Hungary19A-6]
 gi|225856878|ref|YP_002738389.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae P1031]
 gi|15458710|gb|AAK99890.1| Farnesyl diphosphate synthase [Streptococcus pneumoniae R6]
 gi|116076580|gb|ABJ54300.1| geranyltranstransferase [Streptococcus pneumoniae D39]
 gi|168996485|gb|ACA37097.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae Hungary19A-6]
 gi|225724667|gb|ACO20519.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae P1031]
          Length = 291

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|296876934|ref|ZP_06900979.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912]
 gi|296432065|gb|EFH17867.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912]
          Length = 291

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 4/164 (2%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            +V  A+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L    F +I 
Sbjct: 63  FQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEALAILAGDALFLDPFGMIV 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190
           +  + L D ++  L+L L+   G +GM+ GQ+LD++ E    T  ++  I   KTG L+ 
Sbjct: 123 A--SALPDAVKVSLILELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGRLLA 180

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +   +  ++     +  + L   G+ LG+ FQ+ DD+LD   D 
Sbjct: 181 YPFIAAGLILELQADIGQLLEKIGKKLGLAFQVRDDILDLVADF 224


>gi|332074819|gb|EGI85291.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA41301]
          Length = 291

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|148269899|ref|YP_001244359.1| polyprenyl synthetase [Thermotoga petrophila RKU-1]
 gi|281412220|ref|YP_003346299.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
 gi|61657360|emb|CAI44277.1| geranyltranstransferase [Thermotoga naphthophila RKU-10]
 gi|147735443|gb|ABQ46783.1| farnesyl-diphosphate synthase [Thermotoga petrophila RKU-1]
 gi|281373323|gb|ADA66885.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
          Length = 272

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 91/189 (48%), Gaps = 16/189 (8%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A +GGK+IR  LV        V     L V  A+E  H  SLIHDDLP +DN   RRGKP
Sbjct: 30  ATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKP 89

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + H  Y E  A++AG+GL   AF  IS           S++    +       +L G+ +
Sbjct: 90  SCHRTYGEDIALLAGDGLFFLAFSQISKIGN-------SKIFEEFSETA--YKLLLGEAM 140

Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D++ E     I +  V  +   KTGAL  F   +  I+    + +  +++  GE  G+ F
Sbjct: 141 DVEFERRKMEISQEMVERMYAFKTGALFAFCFSAPFIL---KEKDHTKMKLLGEKFGVAF 197

Query: 222 QLADDLLDC 230
           Q+ DDL D 
Sbjct: 198 QIYDDLKDI 206


>gi|149012256|ref|ZP_01833325.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75]
 gi|149019197|ref|ZP_01834559.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72]
 gi|168486528|ref|ZP_02711036.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC1087-00]
 gi|168491126|ref|ZP_02715269.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC0288-04]
 gi|147763582|gb|EDK70517.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75]
 gi|147931067|gb|EDK82046.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72]
 gi|183570476|gb|EDT91004.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC1087-00]
 gi|183574440|gb|EDT94968.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC0288-04]
          Length = 291

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|121998392|ref|YP_001003179.1| polyprenyl synthetase [Halorhodospira halophila SL1]
 gi|121589797|gb|ABM62377.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1]
          Length = 291

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 12/223 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           E SKRI++ L+  + +  +            A+R+A+  GG ++R  L    A+    +H
Sbjct: 2   EPSKRIESALEAAVARATAAPAPPQL---AHAVRHAVFAGGARVRPRLCLTVAAACGDDH 58

Query: 70  LT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     AIE +HC SL+HDDLP  D+   RRG+P+VH  Y E  A++AG+ L+ +A 
Sbjct: 59  PELADAAATAIELMHCASLVHDDLPCFDDAATRRGQPSVHAAYGERLAVLAGDALIVHAL 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           E ++    Q        L+ ++T   G+  G+  GQ  + + E      V    + KTG+
Sbjct: 119 ETLALTVPQAPQRA-GALLTTVTRATGMPYGITAGQAWESEPEI----PVAEYHQAKTGS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           L   A  +   +A  ++++ +R R  GE LG  +Q+ADDL D 
Sbjct: 174 LFAAATVA-GAIAAGAEDQADRWRIVGERLGEAYQVADDLRDA 215


>gi|160889241|ref|ZP_02070244.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492]
 gi|156861248|gb|EDO54679.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492]
          Length = 346

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 18/231 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           NS+       +LL +  SH+     T+    L + + Y L +GGK+IR  L+    +L+ 
Sbjct: 18  NSENAMFTASELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQ 77

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +          IE  H Y+L+HDDL  MD    RRGK TVH  +D+  AI++G+ +L  
Sbjct: 78  EDITRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVL 135

Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182
           A++ ++  P   LK+ +    + SLT    L+ +  GQ LD++ E    +   +   + +
Sbjct: 136 AYQFMAQCPVEHLKEVMD---IFSLT---ALE-ICEGQQLDMEFEHRKDVKAEEYLEMIR 188

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +KT  L+  + + GA++  AS  + E+L  FG NLG+ FQL DD LD   D
Sbjct: 189 LKTSVLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGD 239


>gi|15642935|ref|NP_227976.1| geranyltranstransferase [Thermotoga maritima MSB8]
 gi|4980655|gb|AAD35254.1|AE001701_7 geranyltranstransferase [Thermotoga maritima MSB8]
          Length = 272

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 16/188 (8%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A +GGK+IR  LV        V     L V  A+E  H  SLIHDDLP +DN   RRGKP
Sbjct: 30  ATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKP 89

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + H  Y E  A++AG+GL   AF  IS           S++    +       +L G+ +
Sbjct: 90  SCHRTYGEDIALLAGDGLFFLAFSQISKIGN-------SKIFEEFSETA--YKLLLGEAM 140

Query: 166 DIQDEFID-ETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D++ E    E    M+++M   KTGAL  F C S   +     + K  ++  GE  G+ F
Sbjct: 141 DVEFERRKMEVSQEMVERMYAFKTGALFAF-CFSAPFILKGKDHTK--MKLLGEKFGVAF 197

Query: 222 QLADDLLD 229
           Q+ DDL D
Sbjct: 198 QIYDDLKD 205


>gi|317479594|ref|ZP_07938721.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
 gi|316904256|gb|EFV26083.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
          Length = 346

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 18/231 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           NS+       +LL +  SH+     T+    L + + Y L +GGK+IR  L+    +L+ 
Sbjct: 18  NSENAMFTASELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQ 77

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +          IE  H Y+L+HDDL  MD    RRGK TVH  +D+  AI++G+ +L  
Sbjct: 78  EDITRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVL 135

Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182
           A++ ++  P   LK+ +    + SLT    L+ +  GQ LD++ E    +   +   + +
Sbjct: 136 AYQFMAQCPVEHLKEVMD---IFSLT---ALE-ICEGQQLDMEFEHRKDVKAEEYLEMIR 188

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +KT  L+  + + GA++  AS  + E+L  FG NLG+ FQL DD LD   D
Sbjct: 189 LKTSVLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGD 239


>gi|256811061|ref|YP_003128430.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86]
 gi|256794261|gb|ACV24930.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86]
          Length = 317

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 22/203 (10%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +D+L +A ++ L  GGK+IR +L      L   +    L   AA+E IH Y+LIHDD+  
Sbjct: 22  DDKLYNASKHLLFAGGKRIRPYLAVVTYMLKKDDIEEVLPAAAAVELIHNYTLIHDDIMD 81

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            D+   RRGKPTVH+ + E  AI+AG+ L   AFE +S    ++KDN ++  +L +    
Sbjct: 82  HDDE--RRGKPTVHVVFGEPMAILAGDLLYAKAFEAVS----KIKDNKKAHEVLKILSKA 135

Query: 155 GLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            ++ +  GQ +D++        DE+++     MI+K KTGAL+  + E GA+MA  ++ E
Sbjct: 136 CVE-VCEGQAMDMEFENYYPTMDEYLE-----MIRK-KTGALLEASVEIGAVMADCNEEE 188

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
           +  L+ + + +G+ FQ+ DD+LD
Sbjct: 189 RNALKEYAKRIGLTFQIQDDVLD 211


>gi|1707833|emb|CAA69541.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus solfataricus
           P2]
          Length = 332

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 7/183 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   + L   +   A +  AA+E +H ++L+HDD+  MDN  +RRG PTVH
Sbjct: 43  GGKRLRPLVLVSSSDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +++ E  AI+AG+ L   AFE ++     L  N   +       +I +  +  GQ +D+ 
Sbjct: 101 VKWGEPMAILAGDYLHAKAFESLNESLKGLDGNTFYKAFSIFITSIEI--ISEGQAMDMS 158

Query: 169 DE-FIDETQVFMIQKMKTGALMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +D T+   IQ +K    M F+C +  G I+  A+ +  ++L  +G NLGI FQ+ D
Sbjct: 159 FENRLDVTEEEYIQMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVD 218

Query: 226 DLL 228
           D+L
Sbjct: 219 DIL 221


>gi|288904840|ref|YP_003430062.1| farnesyl diphosphate synthase [Streptococcus gallolyticus UCN34]
 gi|288731566|emb|CBI13121.1| putative farnesyl diphosphate synthase [Streptococcus gallolyticus
           UCN34]
          Length = 289

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 116/197 (58%), Gaps = 8/197 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSM 95
           L+ AI Y++  GGK IR  +  E    F +  LT     V AA+E IH  SLIHDDLP+M
Sbjct: 25  LIEAILYSVEAGGKLIRPLIFLEILEGFGI-ELTEGHFDVAAALEMIHTGSLIHDDLPAM 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRG+ T H ++DE TAI+AG+ L    F ++++    L  + +  L+  L+   G
Sbjct: 84  DDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFGLVAN--AALSADTKVCLIAELSQASG 141

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+GGQMLD++ E   ++ +++ +I   KTG L+ F   +  I+A+ + ++ + LR  
Sbjct: 142 TYGMVGGQMLDMKGEERKLNLSELQLIHANKTGKLLTFPVVAAGIVANLAPDDLKSLREA 201

Query: 214 GENLGIIFQLADDLLDC 230
           G  +G+ FQ+ DD+LD 
Sbjct: 202 GSLVGLAFQVRDDILDV 218


>gi|222480459|ref|YP_002566696.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453361|gb|ACM57626.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 348

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 28/221 (12%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA----------------SLFNVNHLTA 72
            +  QH +RL  A RY L  GGK++R  + T  A                +  + N +  
Sbjct: 28  ELPVQHPERLYEATRYILEAGGKRLRPTVTTLAAEAVTGTDPLSADFREFAALDGNTVDV 87

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R   AIE I  ++LIHDD+  MD   +RRG P VH QYD  TAI+AG+ L + AFE ++
Sbjct: 88  MRAAVAIEVIQSFTLIHDDI--MDEDDLRRGVPAVHEQYDISTAILAGDTLYSKAFEFMT 145

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGAL 188
              +   + + +  ML+ T       +  GQ LD+    +D+ + E  + M++ +KT  L
Sbjct: 146 ETGSDPANGLEAMRMLATT----CTEICEGQSLDVSFESRDDILPEEYLEMVE-LKTAVL 200

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              +  + A++  A     + L  +G + G  FQ+ DD+LD
Sbjct: 201 YGASAATPAVLLGADDEVVDALYQYGIDSGRAFQIQDDVLD 241


>gi|324993385|gb|EGC25305.1| geranyltranstransferase [Streptococcus sanguinis SK405]
          Length = 291

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 6/201 (2%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91
           Q +  L   I Y++  GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDD
Sbjct: 22  QVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+   RRG+ T H ++ E  AI+AG+ L    + +++  + +L   I+  L+  L+
Sbjct: 82  LPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQIKVDLISELS 139

Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM+ GQ+LD+Q E   I    +  I   KTG L+ +   +  ++A A Q+ +++
Sbjct: 140 LAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLIAEAQQSVQDK 199

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           LR  GE LG+ FQ+ DD+LD 
Sbjct: 200 LRRIGELLGLAFQVRDDILDV 220


>gi|68304991|gb|AAY90002.1| predicted dimethylallyltransferase FN1327 [uncultured bacterium
           BAC13K9BAC]
          Length = 274

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 10/199 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N +L   + Y++  GGK++R  ++ E A   ++N    L+   AIE +H YSLIHDDLP 
Sbjct: 28  NTKLYKVMCYSMKNGGKRLRPIIIKEVAKSLSLNKNQFLKSMIAIELVHSYSLIHDDLPC 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+   RRG+ + H +YDE  AI+AGN LLT AF +++             L+  L+   
Sbjct: 88  MDDDDYRRGRLSTHKKYDEAQAILAGNSLLTMAFNLLAQDSN-------PSLVELLSLLS 140

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +G+ GGQ LD+   ++ ++   +  I + KT  L  F   +  I+++ SQ E    R 
Sbjct: 141 GHEGLAGGQSLDVDTTEKKLNFKIIKKIHEQKTAKLFEFCLAAPFIISNKSQKEINMSRK 200

Query: 213 FGENLGIIFQLADDLLDCE 231
           +G+ +G +FQ+ DD+ D E
Sbjct: 201 YGKIIGTVFQIIDDVHDYE 219


>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 343

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 9/197 (4%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY LL GGK++R  L      L      TA+    A+E IH  SLI DDLP MD+  +
Sbjct: 77  AMRYTLLSGGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSL 136

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRG PT H  + E T+I+A N L++ A  + ++S    +      + +  +   +G +G+
Sbjct: 137 RRGIPTNHKVFGEKTSILASNALMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGL 196

Query: 160 LGGQMLDIQDEFI------DETQVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           + GQ  D+  E +      DE +   ++   KT  L+  A   GAIM   S  E ERL+ 
Sbjct: 197 VAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKS 256

Query: 213 FGENLGIIFQLADDLLD 229
           +   +G++FQ+ DD+LD
Sbjct: 257 YARCVGLMFQVMDDVLD 273


>gi|134046661|ref|YP_001098146.1| dimethylallyltranstransferase [Methanococcus maripaludis C5]
 gi|132664286|gb|ABO35932.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Methanococcus maripaludis C5]
          Length = 317

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 116/206 (56%), Gaps = 24/206 (11%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDD 91
           + + +L  A ++ LL GGK++R +L      L   + +T +   A ++E IH Y+L+HDD
Sbjct: 20  EKDTKLYGASKHLLLAGGKRVRPYLSI-ITYLLKKDDITEILAPALSVELIHNYTLVHDD 78

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MDN   RRG PTVH  Y E  AI+AG+ L   AFE +S+    ++D+ ++  +L + 
Sbjct: 79  I--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSN----IEDSKKAHEVLKVL 132

Query: 152 HNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               ++ +  GQ  D++        DE+ D     MI K KTGAL+    E GA+MA+ +
Sbjct: 133 SKACVE-VCEGQTDDMEFEERFPTLDEYFD-----MISK-KTGALIVAPVEIGAVMANCT 185

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
             E++ L  + + +G+ FQ+ DD+LD
Sbjct: 186 PEERKALCNYAKRIGMTFQIQDDVLD 211


>gi|170288584|ref|YP_001738822.1| polyprenyl synthetase [Thermotoga sp. RQ2]
 gi|61657510|emb|CAI44421.1| geranyltranstransferase [Thermotoga sp. RQ2]
 gi|170176087|gb|ACB09139.1| Polyprenyl synthetase [Thermotoga sp. RQ2]
          Length = 272

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 90/188 (47%), Gaps = 16/188 (8%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A +GGK+IR  LV        V     L V  A+E  H  SLIHDDLP +DN   RRGKP
Sbjct: 30  ATVGGKRIRPLLVLTLGEDLGVEEEKLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKP 89

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + H  Y E  A++AG+GL   AF  IS           S++    +       +L G+ +
Sbjct: 90  SCHRTYGEDIALLAGDGLFFLAFSQISKIGN-------SKIFEEFSETA--YKLLLGEAM 140

Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D++ E     I +  V  +   KTGAL  F C S   +     + K  ++  GE  G+ F
Sbjct: 141 DVEFERRKMEISQEMVERMYAFKTGALFAF-CFSAPFILKGKDHTK--MKLLGEKFGVAF 197

Query: 222 QLADDLLD 229
           Q+ DDL D
Sbjct: 198 QIYDDLKD 205


>gi|86130739|ref|ZP_01049338.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
 gi|85818150|gb|EAQ39310.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
          Length = 324

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 12/205 (5%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           H   +    L   I Y L LGGK++R  L      LF  ++  AL    A+E  H +SL+
Sbjct: 18  HALEKEPKNLYEPINYILQLGGKRLRPVLTLMACELFEKDYKDALDAALAVEIFHNFSLV 77

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  MD+  +RRG+ TVH ++D  T I++G+ +L  A+++  +      +    + + 
Sbjct: 78  HDDI--MDDAPLRRGEETVHEKWDINTGILSGDAMLIRAYQLFEN-----YEGATFKELA 130

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQN 205
            L     ++ +  GQ  D+  E  D+  +    KM   KT  L+  A + GAI+A AS++
Sbjct: 131 KLFSKTAIE-VCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAIVAGASKS 189

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
            +E +  +G +LG+ FQL DD LD 
Sbjct: 190 CQEGIYNYGRDLGLAFQLQDDYLDA 214


>gi|14625002|dbj|BAB61881.1| farnesyl diphosphate synthase [Agrobacterium ferrugineum]
          Length = 141

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 10/147 (6%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P+MDN  +RRG PTVH ++DE  A++AG+ L T +FE+++     L  N R  L+ 
Sbjct: 1   HDDMPAMDNDDLRRGLPTVHRKWDEGVAVLAGDALQTLSFELLT--DATLGPN-RLALIS 57

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           S+    G +GM+ GQ  DI  E     +   Q+  +Q  KTGAL  ++  +G ++A A  
Sbjct: 58  SMARAAGARGMVLGQARDIAAETAATPLTLPQITRLQAGKTGALFEWSATAGPVLAGADT 117

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
               R   F   +G+ FQ+ADD+LD E
Sbjct: 118 GPLGR---FAAAIGLAFQIADDILDVE 141


>gi|150402965|ref|YP_001330259.1| polyprenyl synthetase [Methanococcus maripaludis C7]
 gi|150033995|gb|ABR66108.1| Polyprenyl synthetase [Methanococcus maripaludis C7]
          Length = 317

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 28/222 (12%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL--VTECASLFNVNHLTALRV 75
           IL  +  +   +M+   N  L SA ++ LL GGK++R +L  +T      ++N + A   
Sbjct: 7   ILSKIDSELKKYMEKDTN--LYSASKHLLLAGGKRVRPYLSIITYLLKKDDINEIMA--P 62

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             ++E IH Y+L+HDD+  MDN   RRG PTVH  Y E  AI+AG+ L   AFE +S+  
Sbjct: 63  ALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSN-- 118

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGA 187
             + D+ ++  +L +     ++ +  GQ  D++        DE+ D     MI K KTGA
Sbjct: 119 --IGDSKKAHEVLKVLSKACVE-VCEGQTDDMEFEERFPTLDEYFD-----MISK-KTGA 169

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+    E GAIMA  +  E+  L  + + +G+ FQ+ DD+LD
Sbjct: 170 LIVAPVEIGAIMAECTPEERNALCNYAKRIGMTFQIQDDVLD 211


>gi|110597592|ref|ZP_01385877.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
 gi|110340712|gb|EAT59189.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
          Length = 366

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 110/200 (55%), Gaps = 14/200 (7%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L    RY L G GK+IR FL    +   + +   AL V  A+E +H ++L+HDD+  MD 
Sbjct: 71  LYEPARYILEGKGKRIRPFLTLLASEAVSGSSENALNVALAVEVLHNFTLMHDDI--MDQ 128

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R G+PTVH++++   AI++G+ ++ YA+E+    K+      R   ++ + ++  + 
Sbjct: 129 ADLRHGRPTVHLEWNVNAAILSGDMMIAYAYELALQAKSS-----RHAELVHILNDANIT 183

Query: 158 GMLGGQMLDIQ-DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +  GQ LD++ +E  D T    + MI K KTG L+  A E+G +  +A+  +   L  F
Sbjct: 184 -ICEGQALDMELEEKKDATIADYLDMIAK-KTGRLISAALEAGGVAGNATDEQLRSLVLF 241

Query: 214 GENLGIIFQLADDLLDCEED 233
           GE +G  FQ+ DD LD   D
Sbjct: 242 GEKIGRAFQIQDDYLDIMAD 261


>gi|332203057|gb|EGJ17125.1| ispA protein [Streptococcus pneumoniae GA47901]
          Length = 291

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDV 220


>gi|159905289|ref|YP_001548951.1| polyprenyl synthetase [Methanococcus maripaludis C6]
 gi|159886782|gb|ABX01719.1| Polyprenyl synthetase [Methanococcus maripaludis C6]
          Length = 317

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 12/201 (5%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHD 90
            + + +L  A ++ LL GGK++R +L      L   + +T +   A ++E IH Y+L+HD
Sbjct: 19  VEKDTKLYGASKHLLLAGGKRVRPYLSI-ITYLLKKDDITEILAPALSVELIHNYTLVHD 77

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MDN   RRG PTVH  Y E  AI+AG+ L   AFE +S+    ++D+ ++  +L +
Sbjct: 78  DI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAFEALSN----IEDSNKAHEVLKV 131

Query: 151 THNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                ++ +  GQ   ++ ++ F    + F +   KTGAL+    E GA+MA  +  E+E
Sbjct: 132 LSKACVE-VCEGQTDDMEFEERFPTLYEYFDMISKKTGALIVAPVEIGAVMADCTPEERE 190

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  + + +G+ FQ+ DD+LD
Sbjct: 191 ALCNYAKRIGMTFQIQDDVLD 211


>gi|332362900|gb|EGJ40693.1| geranyltranstransferase [Streptococcus sanguinis SK49]
          Length = 291

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 6/201 (2%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91
           Q +  L   I Y++  GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDD
Sbjct: 22  QVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+   RRG+ T H ++ E  AI+AG+ L    + +++  + +L   I+  L+  L+
Sbjct: 82  LPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQIKVDLISELS 139

Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM+ GQ+LD+Q E   I    +  I   KTG L+ +   +  ++A A Q+ +++
Sbjct: 140 LAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLIAEAQQSVQDK 199

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           LR  GE LG+ FQ+ DD+LD 
Sbjct: 200 LRRIGELLGLAFQVRDDILDV 220


>gi|218460669|ref|ZP_03500760.1| farnesyltranstransferase protein [Rhizobium etli Kim 5]
          Length = 297

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 10/183 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG ++R  L  + + +    H   A R  AAIE +HC SL+HDDLP  DN  +RRG+PTV
Sbjct: 48  GGSRMRPKLCLKVSYVCGEKHPELATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTV 107

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLD 166
           H  + E  A++AG+ L+  AF+ +S  +  L   +  +++  +   +G   G++ GQ + 
Sbjct: 108 HRLFGEPIAVLAGDALIVMAFKYLSL-QAALTPELGGRMIEVVAEAVGPSHGLIAGQSM- 165

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              E +    +      KTG+L   A   GA+++ A      ++   GE LG  +Q+ADD
Sbjct: 166 ---EAMTHVAIDRYHHYKTGSLFVAAATCGALVSGADPAPWSKV---GELLGHAYQIADD 219

Query: 227 LLD 229
           + D
Sbjct: 220 IAD 222


>gi|330998275|ref|ZP_08322100.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841]
 gi|329568664|gb|EGG50465.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841]
          Length = 327

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 105/202 (51%), Gaps = 17/202 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   IRY L +GGK+IR  L+    +L+            AIE  H Y+L+HDDL  MD 
Sbjct: 27  LYEPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEEIGFQAVAIEIYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIG 155
             +RRG  TVH ++D+  AI++G+ +L  A+  +    P   L D      ++SL     
Sbjct: 85  ADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQGCPAEHLGD------VMSLFTETA 138

Query: 156 LQGMLG-GQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           L+  +G GQ  D++ E    + E +   + ++KT  L+  A + GA +  A + + E L 
Sbjct: 139 LE--IGEGQQYDMEFEARADVSEEEYIEMIRLKTSVLLACALKIGAWLGGAPRQDAELLY 196

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FGENLG+ FQL DD LD   D
Sbjct: 197 RFGENLGLAFQLQDDYLDVYGD 218


>gi|145641598|ref|ZP_01797175.1| geranyltranstransferase [Haemophilus influenzae R3021]
 gi|145273645|gb|EDK13514.1| geranyltranstransferase [Haemophilus influenzae 22.4-21]
          Length = 163

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIIS 132
            L ++AFEI++
Sbjct: 117 ALQSFAFEILT 127


>gi|189499392|ref|YP_001958862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
 gi|189494833|gb|ACE03381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
          Length = 332

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 14/196 (7%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L    RY L G GK+IR FL    A     +   A++   A+E +H ++L+HDD+  MD 
Sbjct: 37  LYGPARYILDGTGKRIRPFLTLLAAEAVCGSSENAIKTALAVEILHNFTLVHDDI--MDQ 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R G+PTVH+++D   AI++G+ ++ +A+E     KT   D +   L      N    
Sbjct: 95  ADLRHGRPTVHVKWDSTAAILSGDMMIAFAYECALQTKTARHDELVHIL------NDANI 148

Query: 158 GMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +  GQ +D++ E   +  +     MI K KTG L+  + E+G I+  A   + E+L  F
Sbjct: 149 TICEGQAIDMELEQRQDATIADYLDMIAK-KTGRLISASLEAGGIVGDADSEQIEKLMLF 207

Query: 214 GENLGIIFQLADDLLD 229
           G+ +G  FQ+ DD LD
Sbjct: 208 GDKIGRAFQVQDDYLD 223


>gi|297619910|ref|YP_003708015.1| Dimethylallyltranstransferase [Methanococcus voltae A3]
 gi|297378887|gb|ADI37042.1| Dimethylallyltranstransferase [Methanococcus voltae A3]
          Length = 316

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 110/200 (55%), Gaps = 12/200 (6%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + +  L +A ++ LL GGK+IR +L     +L        +    ++E IH Y+L+HDD+
Sbjct: 19  EKDSNLYNASKHLLLAGGKRIRPYLSIMAYNLKKDGLDEIMAPALSVELIHNYTLVHDDI 78

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             MDN   RRGKPTVH  Y E  AI+AG+ L   AFE +S+    + D+I++  +L +  
Sbjct: 79  --MDNDDERRGKPTVHKVYGEPIAILAGDLLYAKAFEALST----IDDSIKAHKVLKILS 132

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              ++ +  GQ  D++ E    T    V MI K KTGAL+      GAIMA  +  E E 
Sbjct: 133 KACVE-VCEGQTDDMEFETTFPTMEQYVNMISK-KTGALIEAPILIGAIMADCTMEETEA 190

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  + + +GI FQ+ DD+LD
Sbjct: 191 LYQYSKRIGINFQIQDDILD 210


>gi|332882802|ref|ZP_08450413.1| heptaprenyl diphosphate synthase component 2 family protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679304|gb|EGJ52290.1| heptaprenyl diphosphate synthase component 2 family protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 322

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 111/218 (50%), Gaps = 20/218 (9%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++ L    + +  +    L   I Y L LGGK++R  L    A LF  ++  AL   AA+
Sbjct: 9   EEFLAHLKTSIAVKEPRNLYEPIDYILQLGGKRLRPVLTLIAADLFGGDYRKALPAAAAV 68

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQ 137
           E  H +SL+HDD+  MDN  +RRGK TVH +++   AI++G+ +L  A+ ++ S  P T 
Sbjct: 69  EVFHNFSLVHDDI--MDNASLRRGKATVHQKWNSNIAILSGDAMLISAYCLLDSYPPDT- 125

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFA 192
                    +  L     L+ +  GQ  D+  +F  + QV + Q     + KT  L+  A
Sbjct: 126 ------FAALAKLFSKTALE-VCEGQQWDM--DFETQAQVSIPQYLQMIRYKTAVLVGAA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            + GAI+A AS   +  +  FG  +G+ FQL DD LD 
Sbjct: 177 LQMGAIIAGASIENQRLIYDFGVTIGLAFQLQDDYLDT 214


>gi|62959203|gb|AAY23709.1| farnesyl diphosphate synthase [Roseobacter sp. JL-126]
          Length = 147

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 14/152 (9%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLM 147
           HDD+P MDN  +RRG+PT HI +DE TAI+AG+ L T AFE++S SP   LK   +  ++
Sbjct: 1   HDDMPGMDNDDLRRGQPTCHIAFDEATAILAGDALQTLAFELLSESPLGGLKAERQLSMV 60

Query: 148 LSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            +L    G  GM  GQ +D+Q   + +++ ++  + + KTGAL+  A   G +       
Sbjct: 61  NALARASGSAGMCAGQAIDLQATGQHVNDHELEHMHRHKTGALIEAAATIGVLC-----G 115

Query: 206 EKERLRC------FGENLGIIFQLADDLLDCE 231
           E+E L+       F  +LG+ FQ+ DD+LD E
Sbjct: 116 EEEALKWQPHFKEFATHLGLAFQVHDDILDVE 147


>gi|20094211|ref|NP_614058.1| geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19]
 gi|19887236|gb|AAM01988.1| Geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19]
          Length = 324

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 26/190 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L  +   +   +    L    A+E IH ++LIHDD+  MD    RRG P VH
Sbjct: 43  GGKRIRPLLAIKSCLMLGGSEEDVLPEAVAVELIHTFTLIHDDI--MDEDDERRGVPAVH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
           +++    AI+AG+ L + AFE+ +            +L  + T       +  GQ +DI 
Sbjct: 101 VKWGVPVAILAGDTLFSKAFEVAAEGGDV---EAVKELARACTE------ICEGQAMDIG 151

Query: 168 --------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                   +DEF++     MI+K KT AL+  +C  G + A A++ + E LR +GENLGI
Sbjct: 152 FENRTEVTEDEFLE-----MIRK-KTAALIRTSCVVGGLKAGANREQLEALREYGENLGI 205

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 206 AFQIQDDVLD 215


>gi|306829639|ref|ZP_07462829.1| geranyltranstransferase [Streptococcus mitis ATCC 6249]
 gi|304428725|gb|EFM31815.1| geranyltranstransferase [Streptococcus mitis ATCC 6249]
          Length = 291

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLF 65
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E   SL 
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQ 55

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V      +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VVIQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+   +   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIITELAPEIQAKLKTVGELIGLAFQVRDDVLDV 220


>gi|239617815|ref|YP_002941137.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506646|gb|ACR80133.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 285

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 13/203 (6%)

Query: 35  HNDRLL------SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H +RL+      S I Y  L GGK++R +L+   +    +     +++G A+E  H  SL
Sbjct: 22  HLERLMVCSSFSSIINYTPLTGGKRLRPYLIALFSQAIGLPSELYMKLGVAVELFHSGSL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDDLP++DN   RRGKP++H  +DE +AI+AG+ L+ Y  +++     +L  N   + +
Sbjct: 82  IHDDLPAIDNDDFRRGKPSLHKAFDEASAILAGDFLMLYPVKVLQ----ELTINEHLKFL 137

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNE 206
           L          ++ G+ LD+  E    T+ V  I ++KT  L  F C S   +      E
Sbjct: 138 LINEWIRTALSIIEGEYLDVTYEPSSNTKDVNRIHRLKTAELFGF-CFSSPFICADRMEE 196

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            ++++  G   G IFQ+ DD+ D
Sbjct: 197 AKKMKETGLRFGHIFQVLDDIKD 219


>gi|126179759|ref|YP_001047724.1| geranyltranstransferase [Methanoculleus marisnigri JR1]
 gi|125862553|gb|ABN57742.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Methanoculleus marisnigri JR1]
          Length = 321

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 110/229 (48%), Gaps = 17/229 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   L+ N++RID +L         +    H D   ++    L GGK++R  +V   A  
Sbjct: 4   LEDYLEMNAERIDKVLH-------RYFGDVHGDLFRASAHLLLAGGKRLRPAVVILAADA 56

Query: 65  FNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   L   A ++E  H ++LIHDD+  MD    RRG PTVH  +DE TAI+AG+ L
Sbjct: 57  VRKGSSDDLIPAALSLELTHNFTLIHDDI--MDGDAARRGVPTVHTIWDEPTAILAGDVL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
              AFE I   +      IR+  ML+ T       +  GQ +D+  E    + E +   +
Sbjct: 115 YAKAFEFICFSEAADAAKIRAVKMLART----CTDICEGQSMDMAFEKRHDVSEVEYLEM 170

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KTG L   +   G I+A AS  + + L  +G N GI FQ+ DDL+D
Sbjct: 171 VSKKTGVLYGASAAIGGILAGASPVQADALYQYGVNSGIAFQIQDDLID 219


>gi|270295967|ref|ZP_06202167.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273371|gb|EFA19233.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 324

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 116/217 (53%), Gaps = 18/217 (8%)

Query: 22  DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           +LL +  SH+     T+    L + + Y L +GGK+IR  L+    +L+  +        
Sbjct: 6   ELLERINSHIAELQFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDITRIFNPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PK 135
             IE  H Y+L+HDDL  MD    RRGK TVH  +D+  AI++G+ +L  A++ ++  P 
Sbjct: 66  TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQFMAQCPV 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             LK+ +    + SLT    L+ +  GQ LD++ E    +   +   + ++KT  L+  +
Sbjct: 124 EHLKEVMD---IFSLT---ALE-ICEGQQLDMEFEHRKDVKAEEYLEMIRLKTSVLLAAS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + GA++  AS  + E+L  FG NLG+ FQL DD LD
Sbjct: 177 LKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLD 213


>gi|146338683|ref|YP_001203731.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278]
 gi|41018904|gb|AAR98495.1| geranyl geranyl synthase [Bradyrhizobium sp. ORS278]
 gi|146191489|emb|CAL75494.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           (Farnesyltranstransferase) [Bradyrhizobium sp. ORS278]
          Length = 289

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 11/199 (5%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95
           RL +A++ A+   G ++R  L    A+    +   A    G+AIE +HC SL+HDDLP  
Sbjct: 26  RLSAAMQAAVFPKGARVRPRLCHAVAAACGDDEPAATDAAGSAIELLHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+P+VH  + E  A++AG+ L+  AF+ ++  K++      ++L+ ++   +G
Sbjct: 86  DNAKLRRGRPSVHAAFGEPLAVLAGDALIVLAFQTLA--KSRCSPLRLARLIETIGDAVG 143

Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  G+  GQ  + + E ID +      + KTGAL  FA  + +  A A   + E  R  G
Sbjct: 144 VPHGIAAGQAWECEPE-IDLSH---YHRSKTGAL--FAAATISGAAAAGHADPEAWRSLG 197

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G  +Q+ADD+ D   D
Sbjct: 198 EKIGEAYQVADDIRDAASD 216


>gi|304316531|ref|YP_003851676.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778033|gb|ADL68592.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 319

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 121/226 (53%), Gaps = 21/226 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           ++++ K+ID  L   +   +  ++    D +LS       GGK++R  LV   A L   N
Sbjct: 8   VKDDMKKIDDFLLSNIKTNSPTIKKAVEDLVLS-------GGKRVRPLLVIAIARLGEYN 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + + A+IE +H  +L+HDD+  +D+  +RRG+ +V  +Y + TA+  G+ L + AF
Sbjct: 61  EDKIIPIAASIEIMHMATLVHDDI--IDDSKMRRGRESVQSKYGKETAVFTGDFLFSQAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KT 185
            +I+        +I S+  L L    G++ +  G++    + + +D + +  ++++  KT
Sbjct: 119 NVIA--------DIISKENLKLIAR-GVKAICEGEIEQFDNRYNLDISVLRYLKRIYRKT 169

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             L   +CESGA  A  S+     +R FG N+G+ FQ+ADD+LD E
Sbjct: 170 ALLFAISCESGATQAGLSKELTRAMRRFGLNVGMAFQIADDILDYE 215


>gi|311748420|ref|ZP_07722205.1| polyprenyl synthetase [Algoriphagus sp. PR1]
 gi|126576932|gb|EAZ81180.1| polyprenyl synthetase [Algoriphagus sp. PR1]
          Length = 328

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 12/203 (5%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
            L   I Y L +GGK+IR  L      ++  N    L   +AIE  H ++L+HDD+  MD
Sbjct: 29  ELYEPINYILNIGGKRIRPLLSLLAYGMYAENPGKILSQASAIEVFHNFTLMHDDI--MD 86

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              +RRG  TVH ++D   AI++G+ +L  A++++   +  L   I          N   
Sbjct: 87  QAPLRRGNATVHEKWDANIAILSGDVMLVKAYDLLMETEPALLPEIIRLF------NKTA 140

Query: 157 QGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ  D+  E    ++E     + ++KT  L+  A + GAI+  AS +E  RL  F
Sbjct: 141 ADVCEGQQFDMNFENQDHVNEKDYLNMIRLKTAVLLGCALKMGAILGGASSDEAHRLYEF 200

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
           G N+GI FQL DDLLD   D  K
Sbjct: 201 GVNVGIGFQLKDDLLDVFADQEK 223


>gi|282877390|ref|ZP_06286213.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
 gi|281300442|gb|EFA92788.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
          Length = 324

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 21/229 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE  K ++  LD L    A   Q +H   L   I Y L LGGK+IR  L+    +L+  +
Sbjct: 5   QEILKLVNNHLDSL----ADERQPRH---LYEPIEYVLSLGGKRIRPTLMLLAYNLYREH 57

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L     IE  H Y+L+HDDL  MD   +RRG  TVH ++D  TAI++G+ +L  A+
Sbjct: 58  PEDILMPACGIETYHNYTLLHDDL--MDQADLRRGHETVHKRWDANTAILSGDSMLVLAY 115

Query: 129 EIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184
           + ++  +  +LK+ I   L       IG      GQ  D+  E    + E +   + ++K
Sbjct: 116 QRMAQCRPDKLKEVI--DLFTQTALEIG-----EGQQYDMDFEHRNDVTEDEYIEMIRLK 168

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L+  A + GAI+  AS  +   L  FGE +G+ FQL DD LD   D
Sbjct: 169 TSVLLACALKIGAILGDASAEDANNLYRFGEKIGLAFQLQDDFLDVYGD 217


>gi|163786604|ref|ZP_02181052.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878464|gb|EDP72520.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1]
          Length = 330

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 101/200 (50%), Gaps = 16/200 (8%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L + I Y L LGGK++R  L    A +F      A+    ++E  H +SL+HDD+  M
Sbjct: 31  NNLYAPINYILKLGGKRLRPVLTLMTAEVFGEEAKNAMNAALSVEVFHNFSLVHDDI--M 88

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRGK TVH +++  T I++G+ +L  A+        QL +N   +  L+L     
Sbjct: 89  DEAPLRRGKKTVHEKWNLNTGILSGDAMLILAY--------QLFENYEPETFLALAKLFS 140

Query: 156 LQGM--LGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERL 210
              +    GQ  DI  E  ++  +    KM   KT  L+  A + GAI+A AS  ++  +
Sbjct: 141 KTALEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVGAAMKMGAIVAKASAEDQNAI 200

Query: 211 RCFGENLGIIFQLADDLLDC 230
             FG  LG+ FQL DD LD 
Sbjct: 201 YDFGSYLGVAFQLQDDYLDA 220


>gi|332662624|ref|YP_004445412.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331438|gb|AEE48539.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100]
          Length = 323

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 11/196 (5%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L + + Y + LGGK++R  L      LF  ++  AL +  AIE  H +SL+HDD+  MD 
Sbjct: 25  LYAPVNYIMELGGKRLRPILALMGYELFKADYRPALPLAYAIEIFHNFSLVHDDV--MDA 82

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+ TVH +++   AI++G+ +L YA++ +     +L    R   ++ + + +  +
Sbjct: 83  APLRRGQATVHTKWNLNAAILSGDVMLIYAYDYL----LRLDAPNRIAEIVKVFNRVARE 138

Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ LDI  E   +  +     + ++KT  L+  A E   + A AS ++ + L  FG
Sbjct: 139 -VCEGQQLDIDFETRSDVSIPEYLRMIELKTSVLIAGALEMAGLAAGASMDDVQHLYEFG 197

Query: 215 ENLGIIFQLADDLLDC 230
            N+GI FQL DD+LD 
Sbjct: 198 RNVGIAFQLQDDILDT 213


>gi|270292608|ref|ZP_06198819.1| geranyltranstransferase [Streptococcus sp. M143]
 gi|270278587|gb|EFA24433.1| geranyltranstransferase [Streptococcus sp. M143]
          Length = 291

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 10/203 (4%)

Query: 36  NDRLLSAIRYALL-----GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIH 89
           + +  S++R ++L     GGK+IR FL+ E      V    A  +V AA+E IH  SLIH
Sbjct: 20  DQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVAIKPAHAQVAAALEMIHTGSLIH 79

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MD+   RRG+ T H ++ E  AI+AG+ L    + +I+  +  L   I+  L+ +
Sbjct: 80  DDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDPYALIA--QADLPSQIKVDLIAN 137

Query: 150 LTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+   G  GM+ GQ+LD++ E   +   ++  I   KTG L+ +  ++ AI+A  +   +
Sbjct: 138 LSLASGSLGMVAGQVLDMEGEHQHLSLKELQTIHANKTGKLLAYPFQAAAIIAELAPEMQ 197

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
            +L+  GE +G+ FQ+ DD+LD 
Sbjct: 198 AKLKTVGELIGLAFQVRDDVLDV 220


>gi|120437409|ref|YP_863095.1| isoprenyl synthetase [Gramella forsetii KT0803]
 gi|117579559|emb|CAL68028.1| isoprenyl synthetase [Gramella forsetii KT0803]
          Length = 324

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 96/185 (51%), Gaps = 11/185 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV     +F+ N+  AL    AIE  H +SL+HDD+  MD+  +RRGK TVH
Sbjct: 38  GGKRLRPVLVLMATEIFDCNYKKALDAALAIEIFHNFSLVHDDI--MDDAPLRRGKETVH 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D  T I++G+ +L  A+++  S +    D  +    LS         +  GQ  DI 
Sbjct: 96  EKWDINTGILSGDAMLINAYQLFESYEG---DTFKE---LSKLFTKTAIEVCEGQQYDID 149

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   +    KM   KT  L+  + + GAI+A  S   KE +  +G  LGI FQL D
Sbjct: 150 FETRDNVSIENYLKMIEYKTAVLVGASLQMGAIVAQTSTACKEAIYQYGRLLGIAFQLQD 209

Query: 226 DLLDC 230
           D LD 
Sbjct: 210 DYLDA 214


>gi|194333227|ref|YP_002015087.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311045|gb|ACF45440.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 337

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 121/234 (51%), Gaps = 21/234 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           + +K +E  KRI+  L     ++         + L +  RY L G GK+IR FL    A 
Sbjct: 15  VETKYKEYHKRINDALAGCFTKSTP-------ETLYAPARYILEGKGKRIRPFLTLLAAE 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +   AL     +E +H ++L+HDD+  MD   +R G+PTVH+++DE  AI++G+ +
Sbjct: 68  SVCNSSDDALNAALGVEILHNFTLMHDDI--MDQADLRHGRPTVHLKWDENAAILSGDMM 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----M 179
           + +A+E   + KT      R   ++ + ++  +  +  GQ LD++ E   E  +     M
Sbjct: 126 IAFAYECALNTKTD-----RHAELVHILNDANIT-ICEGQALDMELEQRAEATIADYLDM 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I K KTG L+  A E+G ++ +A   + + L  FGE +G  FQ+ DD LD   D
Sbjct: 180 ISK-KTGRLISAALEAGGVVGNADALQLQALVTFGEKIGRAFQVQDDYLDIMAD 232


>gi|291298290|ref|YP_003509568.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290567510|gb|ADD40475.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 346

 Score = 98.6 bits (244), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 13/183 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV  CA     + + AL    A+E +H +SL+HDD+  +D    RR +PT   
Sbjct: 62  GKAIRPALVLLCARAVGSSDIEALPAAVAVELVHNFSLVHDDV--IDRDVTRRHRPTAWS 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            + +  AI+AG+ + T A  +++ S      D I+         N  +Q ++ GQ  D+ 
Sbjct: 120 VFGDGAAILAGDAMSTLACAVLADSGHPAAMDGIK-------LVNRAIQELIDGQHADVS 172

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E ID  +   +   KTGAL+  AC  GA     S ++ ERLR FG +LG+ FQ  D
Sbjct: 173 FETREQIDPQECRAMAAAKTGALLGCACAIGARFGGGSPHQVERLRAFGTDLGLAFQHVD 232

Query: 226 DLL 228
           DLL
Sbjct: 233 DLL 235


>gi|289167859|ref|YP_003446128.1| farnesyl diphosphate synthase [Streptococcus mitis B6]
 gi|288907426|emb|CBJ22263.1| farnesyl diphosphate synthase [Streptococcus mitis B6]
          Length = 291

 Score = 98.6 bits (244), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 16/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E     +
Sbjct: 2   KKQEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALH 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  IAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQ 181
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E     ++E Q   I 
Sbjct: 116 DPYVLIA--QADLPSQIKVDLISNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQT--IH 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 172 ANKTGKLLAYPFQAAAIIAELAPEMQVKLKIVGELIGLAFQVRDDVLDV 220


>gi|312891447|ref|ZP_07750964.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603]
 gi|311296141|gb|EFQ73293.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603]
          Length = 324

 Score = 98.6 bits (244), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 17/206 (8%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
            L   I Y + LGGK++R  L+     +F  +   AL    AIE  H ++L+HDD+  MD
Sbjct: 26  ELYEPIYYIMALGGKRLRPCLLLMACDMFGGDVQQALAPALAIEVFHNFTLMHDDI--MD 83

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              +RRGKPTVH +++   AI++G+ ++  A ++I     Q+ D I   + L + ++  +
Sbjct: 84  KAPLRRGKPTVHEKWNANVAILSGDVMMVEANKLI----MQVDDRILRPV-LDVFNDTAV 138

Query: 157 QGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G+  GQ +D+  E      IDE  + MI ++KT  L+  A + GA++  A   E   L 
Sbjct: 139 -GVCEGQQIDMNFETLTHVTIDEY-INMI-RLKTAVLVAGALKMGALVGGADDAEASLLY 195

Query: 212 CFGENLGIIFQLADDLLDCEEDLPKK 237
            FGE LGI FQL DD+LD   D PKK
Sbjct: 196 SFGEQLGIAFQLQDDILDVYGD-PKK 220


>gi|329961528|ref|ZP_08299609.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
 gi|328531740|gb|EGF58569.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
          Length = 324

 Score = 98.6 bits (244), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 18/222 (8%)

Query: 22  DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           +LL +  SH+     T+    L   + Y L +GGK+IR  L+    +L+  +        
Sbjct: 6   ELLEKINSHIADLKFTRTPQGLYDPVSYVLSMGGKRIRPVLMLMAYNLYKEDLARIYGPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PK 135
             IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A+  ++  P 
Sbjct: 66  TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYRFMAQCPV 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             LK+ +    + SLT    L+ +  GQ +D++ E    + E +   + ++KTG L+  +
Sbjct: 124 DCLKEVME---LFSLT---ALE-ICEGQQMDMEFELRKDVREEEYLEMIRLKTGVLLAAS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            + GA++  AS  +   L  FG NLG+ FQL DDLLD   D+
Sbjct: 177 LKIGALLGGASAEDAGHLYDFGMNLGVAFQLKDDLLDVYGDV 218


>gi|319938731|ref|ZP_08013095.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
 gi|319811781|gb|EFW08047.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
          Length = 300

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 116/196 (59%), Gaps = 6/196 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L+ AI Y++  GGK+IR  L+ E      +    A  +V AA+E IH  SLIHDDLP+MD
Sbjct: 27  LIEAILYSVNAGGKRIRPLLLLELLEGLGLELTEAHFQVAAALEMIHTGSLIHDDLPAMD 86

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +   RRG+ T H ++ E  AI+AG+ L   ++ +I+  +  L   I+  L+  L+   G 
Sbjct: 87  DDDYRRGRLTSHKKFGEAMAILAGDSLFLDSYALIA--EAALPSQIKVNLIAELSLAAGT 144

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ+LD+Q E  D +  ++  I   KTG L+ +   +  ++A  +Q ++E+LR  G
Sbjct: 145 FGMVGGQVLDMQGEGKDISLAELQNIHANKTGKLLTYPFIAAGLIAEVAQPQQEKLRKIG 204

Query: 215 ENLGIIFQLADDLLDC 230
           + LG+ FQ+ DD+LD 
Sbjct: 205 QLLGLAFQVRDDILDI 220


>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
 gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
          Length = 371

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 16/205 (7%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYALL GGK++R  L     ++       A+   AA+E +H  SL+HDDLP MD+
Sbjct: 99  LHDAMRYALLAGGKRVRPALCLAACAVVGGPEAWAMPAAAAVEMVHTMSLVHDDLPCMDD 158

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---------PKTQLKDNIRSQLML 148
             +RRGKPT H+ Y E  A++AG+ LL+ +F  ++S         P+      +R+  + 
Sbjct: 159 DDLRRGKPTCHVVYGEPIAVLAGDALLSLSFHHMASVGSYPPDVDPEKHPARVVRA--IG 216

Query: 149 SLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            L   IG +G++ GQ++D++     E +   ++  I   KT AL+  +   GAI+   + 
Sbjct: 217 ELARCIGSEGLVAGQVVDLEMTGTSEPVPLERLEYIHLHKTAALLEASVVIGAIIGGGTD 276

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
            + ERLR +  ++G++FQ+ DD+LD
Sbjct: 277 EQIERLRKYARSIGLLFQVVDDILD 301


>gi|295136374|ref|YP_003587050.1| isoprenyl synthetase [Zunongwangia profunda SM-A87]
 gi|294984389|gb|ADF54854.1| isoprenyl synthetase [Zunongwangia profunda SM-A87]
          Length = 324

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 101/192 (52%), Gaps = 12/192 (6%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           LGGK++R  LV     +F+ ++  AL    AIE  H +SL+HDD+  MD+  +RRGK TV
Sbjct: 37  LGGKRLRPVLVLMATEIFDKDYKKALDASLAIEIFHNFSLVHDDI--MDDAPLRRGKATV 94

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++D  T I++G+ +L  A+++  + +    D  +    L     I +     GQ  DI
Sbjct: 95  HEKWDVNTGILSGDAMLINAYQLFENYEG---DTFKELAQLFTKTAIEV---CEGQQYDI 148

Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             E  D+  +    KM   KT  L+  + + GAI+A   +  K+ +  FG  LGI FQL 
Sbjct: 149 DFETRDDVSIDDYLKMIEYKTAVLVGASLQMGAIVAEVDEECKKAIYQFGRLLGIAFQLQ 208

Query: 225 DDLLDCEEDLPK 236
           DD LD   D PK
Sbjct: 209 DDFLDAFGD-PK 219


>gi|119356223|ref|YP_910867.1| polyprenyl synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119353572|gb|ABL64443.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Chlorobium phaeobacteroides DSM 266]
          Length = 332

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 16/201 (7%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +  +Y L G GK+IR FL    +     +   AL+V  A+E +H ++L+HDD+  MD 
Sbjct: 37  LYAPAKYILDGKGKRIRPFLTLLASEAVCGSSEHALKVALAVEILHNFTLMHDDI--MDQ 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGL 156
             +R G+PTVH Q++   AI++G+ ++ YA+E+ + SP ++       Q+ L    N   
Sbjct: 95  AELRHGRPTVHKQWNANVAILSGDMMIAYAYELALQSPSSR-------QIELVHILNDAN 147

Query: 157 QGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             +  GQ LDI+ E      +     MI K K+G L+  A E+G +  +A+  +   L  
Sbjct: 148 ITICEGQALDIELEEKKHATIADYLDMIAK-KSGRLISAALEAGGVAGNATDEQLNNLVT 206

Query: 213 FGENLGIIFQLADDLLDCEED 233
           FGE +G  FQ+ DD LD   D
Sbjct: 207 FGEKIGRAFQIQDDFLDIMAD 227


>gi|91215079|ref|ZP_01252051.1| putative isoprenoid biosynthesis related protein [Psychroflexus
           torquis ATCC 700755]
 gi|91186684|gb|EAS73055.1| putative isoprenoid biosynthesis related protein [Psychroflexus
           torquis ATCC 700755]
          Length = 324

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 14/197 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  LV   A +F      A+    AIE  H +SL+HDD+  MD+
Sbjct: 27  LYEPIEYILGLGGKRLRPVLVLMSADIFGGGREKAMDAALAIEIFHNFSLVHDDI--MDD 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG+ TVH +++  T I++G+ +L  A+++  + P    K       +  L     +
Sbjct: 85  APLRRGQQTVHEKWNINTGILSGDAMLINAYQLFENYPAEHFKP------LAELFTKTAI 138

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCF 213
           + +  GQ  D+  E  D+  +    KM   KT  L+  A + GAI++  SQN + ++  F
Sbjct: 139 E-VCEGQQYDVDFEERDDVTIEEYLKMIEYKTAVLVGAALKMGAILSDVSQNVQNKIYEF 197

Query: 214 GENLGIIFQLADDLLDC 230
           G  LGI FQ+ DD LD 
Sbjct: 198 GRLLGIAFQIQDDYLDT 214


>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
 gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
          Length = 261

 Score = 98.2 bits (243), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 9/198 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+RYA+ GG++           L       A+    A+E I     + DDLPS+D+  +R
Sbjct: 4   AMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDSELR 63

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
            GKPTVH  +   TA+ AG  LL   FE +++   +   +  ++++  +   IG  G+L 
Sbjct: 64  HGKPTVHRAFGIPTALFAGTALLALGFEHLAA---RYSGDTAARMVAEVGRAIGSTGLLA 120

Query: 162 GQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           GQ +D+  E  D     ET  F +   KT AL+  +  +GAI   AS+ E E LR +G  
Sbjct: 121 GQAVDLGIENPDRGVELETLEF-VHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRV 179

Query: 217 LGIIFQLADDLLDCEEDL 234
            G+++Q+ DD+ D  + +
Sbjct: 180 TGLLYQIVDDVADATKTM 197


>gi|212696081|ref|ZP_03304209.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676710|gb|EEB36317.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 279

 Score = 98.2 bits (243), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 15/227 (6%)

Query: 12  NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           N K  D IL  D  ++  A   +   ++ L  A+ YA   GK+IR  +  E   +   + 
Sbjct: 5   NKKEFDRILNTDKKIIDQAMKEKFVDDNPLNEALIYASDSGKRIRPIVFLETCRMLLGDK 64

Query: 70  L--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           L    +    ++E +H YSL+HDD+P MDN   RRGK TVH ++ E  AI+ G+ LL++A
Sbjct: 65  LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124

Query: 128 FEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQK 182
           FE I      L  +I  Q  L     L    G  GM+ GQ+ DI+ ++  + + +  + K
Sbjct: 125 FENI------LNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYK 178

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   A     +       +  +L  +   LG+ FQL DD+LD
Sbjct: 179 NKTSRLFMAALMMAGLYCQLDDEKLTKLENYAYYLGMAFQLQDDILD 225


>gi|294676241|ref|YP_003576856.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003]
 gi|117510|sp|P17060|CRTE_RHOCA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; AltName: Full=Farnesyltranstransferase
 gi|46003|emb|CAA36538.1| unnamed protein product [Rhodobacter capsulatus SB 1003]
 gi|46128|emb|CAA77545.1| 289 aa (30 kD) phytoene synthase [Rhodobacter capsulatus]
 gi|294475061|gb|ADE84449.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003]
 gi|227044|prf||1613414G crtE gene
          Length = 289

 Score = 98.2 bits (243), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 108/221 (48%), Gaps = 16/221 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KRI++ L   L   A     +    L +A+ Y +  GG +IR  ++   A L   +   A
Sbjct: 5   KRIESALVKALSPEA---LGESPPLLAAALPYGVFPGGARIRPTILVSVA-LACGDDCPA 60

Query: 73  LRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           +   AA+  E +HC SL+HDDLP+ DN  IRRGKP++H  Y+E  A++AG+ LL   FE+
Sbjct: 61  VTDAAAVALELMHCASLVHDDLPAFDNADIRRGKPSLHKAYNEPLAVLAGDSLLIRGFEV 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++         +     L L   +G L G  GG       E   +  +    + KTGAL 
Sbjct: 121 LAD-----VGAVNPDRALKLISKLGQLSGARGGICAGQAWESESKVDLAAYHQAKTGALF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             A + GAI   A+  E E     G  +G  FQ+ADDL D 
Sbjct: 176 IAATQMGAI---AAGYEAEPWFDLGMRIGSAFQIADDLKDA 213


>gi|322389034|ref|ZP_08062602.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903]
 gi|321144257|gb|EFX39667.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903]
          Length = 291

 Score = 98.2 bits (243), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 4/164 (2%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            +V  A+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L    F +I+
Sbjct: 63  FQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDALFLDPFGMIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMC 190
           +  + L D ++  L+  L+   G +GM+ GQ+LD++ E    T  ++  I   KTG L+ 
Sbjct: 123 A--SALPDAVKVSLIFELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHANKTGRLLA 180

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +   +  ++     +  + L   G+ LG+ FQ+ DD+LD   D 
Sbjct: 181 YPFIAAGLILELQADIGQLLEKIGKKLGLAFQVRDDILDLVADF 224


>gi|327469005|gb|EGF14477.1| geranyltranstransferase [Streptococcus sanguinis SK330]
          Length = 291

 Score = 98.2 bits (243), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 5/191 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++A A Q  +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIAEAEQPVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDCEEDLPK 236
           D+LD      K
Sbjct: 216 DILDVTASFEK 226


>gi|167565893|ref|ZP_02358809.1| polyprenyl synthetase [Burkholderia oklahomensis EO147]
 gi|167572980|ref|ZP_02365854.1| polyprenyl synthetase [Burkholderia oklahomensis C6786]
          Length = 222

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 8/159 (5%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH +SLI DDLP+MDN   R GKP++H +YD  TA++A +GL++ AF  +S  +  L  +
Sbjct: 2   IHVFSLIQDDLPAMDNDDTRHGKPSLHTKYDVATALLACDGLISQAFLTLS--EIPLPTD 59

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM 199
            R  L   L  +IG  G+ GGQ +D+      ++  ++  + +MKTGAL+  +   G + 
Sbjct: 60  GRVALAHELASSIGSSGLTGGQYIDLTSVGTHLNREELERMHRMKTGALIRASVRMGVLC 119

Query: 200 AHASQNEKE----RLRCFGENLGIIFQLADDLLDCEEDL 234
               + E       +  +G  LG+ +Q+ DD+LD   DL
Sbjct: 120 GSGCRTESSAAWNAMGEYGNLLGLAYQVVDDILDSTSDL 158


>gi|328479791|gb|EGF48907.1| Geranyltranstransferase [Lactobacillus rhamnosus MTCC 5462]
          Length = 252

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 6/186 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+    ++++     AL   AA+E +H YSLIHDDLP+MDN  +RRG+PT H
Sbjct: 8   GGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPAMDNDDLRRGQPTNH 67

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+ E  AI+AG+ LLT AF I+S    Q      + L+  L    G  GM+ GQ+LD+ 
Sbjct: 68  KQFGEALAILAGDALLTDAFAILS----QHYPEKGAALVQILAEAAGSSGMVAGQVLDMD 123

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            E    D   +  + + KTGAL+      G++     + ++  L  F    G+ FQ+ DD
Sbjct: 124 GEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALADFAAAFGLGFQIKDD 183

Query: 227 LLDCEE 232
           + D  +
Sbjct: 184 INDVTK 189


>gi|125717531|ref|YP_001034664.1| farnesyl diphosphate synthase [Streptococcus sanguinis SK36]
 gi|125497448|gb|ABN44114.1| Farnesyl diphosphate synthase, putative [Streptococcus sanguinis
           SK36]
          Length = 291

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 114/201 (56%), Gaps = 6/201 (2%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91
           Q +  L   I Y++  GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDD
Sbjct: 22  QVSSDLAEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+   RRG+ T H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+
Sbjct: 82  LPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELS 139

Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM+ GQ+LD+Q E   I    + +I   KTG L+ +   +  ++  A Q+ +++
Sbjct: 140 LAAGSFGMVAGQVLDMQGEGQAISLEDLKIIHANKTGKLLTYPFVAAGLIVQAQQSVQDK 199

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           LR  GE LG+ FQ+ DD+LD 
Sbjct: 200 LRRIGELLGLAFQVRDDILDV 220


>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
          Length = 147

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 2/146 (1%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SL+HDDLP +DN   RRGKPT H  Y E  A++ G+ LL+ +FE I++    +  +
Sbjct: 2   IHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKGVSKD 61

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIM 199
              +++  L  ++G +G++ GQ++DI  E  D     +  I   KT  L+  +   GAIM
Sbjct: 62  RIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAIM 121

Query: 200 AHASQNEKERLRCFGENLGIIFQLAD 225
              S  + E+LR F  ++G++FQ+ D
Sbjct: 122 GGGSDQQIEKLRKFARSIGLLFQVVD 147


>gi|325688242|gb|EGD30261.1| geranyltranstransferase [Streptococcus sanguinis SK72]
          Length = 291

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  +++L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RSELPSQVKVDLIYELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++A   Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIAEVEQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|307297796|ref|ZP_07577602.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917056|gb|EFN47438.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 279

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 10/187 (5%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            L GGK++R++L+ E +         AL+ G A+E  H  SLIHDDLP++DN  IRRG P
Sbjct: 35  PLAGGKRLRAYLIWELSRYTGFGEENALKAGIAVELFHSGSLIHDDLPAIDNDTIRRGLP 94

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + HI++ E  AI+AG+ L+ +   + SS   + +       +L L     L+ ++ G+  
Sbjct: 95  SSHIKFGESKAILAGDFLMLFPGRVFSSLDLETR---YIHPILELWQETSLK-VVEGEFD 150

Query: 166 DIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D+  E     Q+  I   KTGAL   CFA    A      + + + +   G   G ++Q+
Sbjct: 151 DVFPEDESREQMERIHAAKTGALFGFCFA----APFIREKREKIDEMYKLGVRFGKLYQM 206

Query: 224 ADDLLDC 230
            DD+ D 
Sbjct: 207 MDDIKDV 213


>gi|307822417|ref|ZP_07652649.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
 gi|307736983|gb|EFO07828.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
          Length = 298

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 115/202 (56%), Gaps = 7/202 (3%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RY+ L GGK++R  L         +          A+E IH YSLIHDDLP+MD
Sbjct: 33  KLHRAMRYSTLDGGKRMRPMLTYCTGKTLGIAPEALDGPACAVEFIHVYSLIHDDLPAMD 92

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIG 155
           +  +RRGK T H+ +DE TAI+ G+ L   AFEI+++ P        R +++++LT   G
Sbjct: 93  DDDLRRGKATCHVAFDEATAILTGDALQALAFEILANDPSITATAEGRLKMIIALTKASG 152

Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLR 211
            QGM+GGQ +D++      T  ++  +   KTGAL+  A  + A +A A    +  ++L 
Sbjct: 153 SQGMVGGQAIDLESVGTKLTLPELENMHIHKTGALI-RASVNMATLAKADIDPDVAKKLD 211

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            + + +G+ FQ+ DD+LD E D
Sbjct: 212 NYAKCIGLSFQVKDDILDEESD 233


>gi|332968796|gb|EGK07844.1| geranyltranstransferase [Psychrobacter sp. 1501(2011)]
          Length = 315

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 26/214 (12%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGA-----------------AIE 80
           L  A  YA+ G GK++R  L+  CA    +   TA+  GA                 A+E
Sbjct: 36  LKEACHYAMTGQGKRVRP-LMAACAYHTVIYSNTAVDSGAETLSDSVLTDNCRRAMLAVE 94

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT---Q 137
            +H YSLIHDDLP MD+  +RRG+PT HI++DE TA++ G+ L T AFEI+++       
Sbjct: 95  FLHTYSLIHDDLPCMDDDDLRRGRPTCHIKFDEATAMLTGDVLQTLAFEILTADIEGFQP 154

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACES 195
           + D   ++L+         + M+ GQMLD+  E  + TQ  +  I + KTGAL+  A   
Sbjct: 155 ISDEQAAKLLTVFAPRA--RRMVSGQMLDLNAENKEITQAELEAIHRDKTGALIEAAVLM 212

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           G + A AS  +   +  F  N+G+ FQ+ DD+LD
Sbjct: 213 GGVCAEASAEQLAAMTQFATNIGLAFQVQDDILD 246


>gi|224025695|ref|ZP_03644061.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM
           18228]
 gi|224018931|gb|EEF76929.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM
           18228]
          Length = 327

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 108/198 (54%), Gaps = 15/198 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L+    +L+  +  +     A IE  H ++L+HDDL  MDN
Sbjct: 29  LYDPIEYVLALGGKRLRPVLMLLAYNLYREDVESIFSQAAGIETYHNFTLLHDDL--MDN 86

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
             +RRGKP VH +++E TAI++G+ +L  +Y F +   P   +++      ++ +     
Sbjct: 87  ADMRRGKPVVHKKWNENTAILSGDAMLILSYQFMMNQCPPEHVQE------VMEIFGRTA 140

Query: 156 LQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           L+ +  GQ  D++ E  ++  V     + ++KT  L+  A + GA++  AS  + ++L  
Sbjct: 141 LE-VCEGQQWDMEFESRNDVTVGEYIEMIRLKTSVLLAAALKIGAVLGGASSADAQKLYD 199

Query: 213 FGENLGIIFQLADDLLDC 230
           FG  +G+ FQL DD LD 
Sbjct: 200 FGIRMGLAFQLQDDYLDV 217


>gi|219852944|ref|YP_002467376.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c]
 gi|219547203|gb|ACL17653.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c]
          Length = 320

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 12/186 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  ++   A          L   A A+E  H ++LIHDD+  MD   +RRG PTV
Sbjct: 40  GGKRLRPAVMMLAADAVRKGSSDDLMPAAIALELTHSFTLIHDDI--MDGDEVRRGVPTV 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++DE TAI+AG+ L   AF  I          +R+  ML++T     + +  GQ LD+
Sbjct: 98  NKKWDEPTAILAGDVLYARAFAFICQALAMDAAKLRAVSMLAVT----CEEICAGQHLDM 153

Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               +D+  +E  + M+ K KTGAL   +   G ++A  SQ + + L  +G N+G+ FQ+
Sbjct: 154 AFEDRDDVSEEEYLEMVGK-KTGALYAASTAMGGVLAGGSQPQVDALYRYGMNIGVAFQI 212

Query: 224 ADDLLD 229
            DDL+D
Sbjct: 213 QDDLID 218


>gi|313901601|ref|ZP_07835040.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM
           13965]
 gi|313468131|gb|EFR63606.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM
           13965]
          Length = 328

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 8/209 (3%)

Query: 33  TQHNDRLLSAIRYA-LLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLI 88
           T    R+  A+RY+ L GGK +R  L+     C     V      R  AA+E +H YSLI
Sbjct: 55  TAPPSRIHEAMRYSTLAGGKALRPVLLMAAARCVGGPQVVTPAVERAAAAVELVHTYSLI 114

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLM 147
           HDDLP+MD+  +RRG+P  H+ + E  AI+AG+ LLT AFE+++  P+      +   ++
Sbjct: 115 HDDLPAMDDDDMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADPAVALAVV 174

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             L    G  G++GGQ+ D+       +D   +  I + KTGAL       GA +A A+ 
Sbjct: 175 EELAVAAGTAGLIGGQVDDLAATTAAGLDLAGLQSIHRRKTGALFRACVRMGARLAGATA 234

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
            E E L  F    G  FQ+ DD+LD   D
Sbjct: 235 TELEALTAFATAFGEAFQIVDDILDVTGD 263


>gi|304393689|ref|ZP_07375617.1| geranyltranstransferase [Ahrensia sp. R2A130]
 gi|303294696|gb|EFL89068.1| geranyltranstransferase [Ahrensia sp. R2A130]
          Length = 289

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 16/223 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +N+ RI+  L+  L + A+        +L +A+  A+  GG ++R  L    A     +H
Sbjct: 2   DNAARIEECLERSLSRAAN---ADCPPKLRAAVHSAVFPGGARVRPQLTLAVAEACG-DH 57

Query: 70  LTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              L  GAA  IE +HC SL+HDDLP  D+  +RRGKPT+H  Y E  A++ G+ L+  A
Sbjct: 58  EIELVDGAAAAIELLHCASLVHDDLPCFDDADLRRGKPTIHSLYGEEIAVLTGDALIIEA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           F  + +   Q    + + L+ ++    G+  G+  GQ  + +D  +D   V      KTG
Sbjct: 118 FNTLCASSAQHPSRLPA-LVAAVCAATGMTTGITAGQAWESED-VVD---VERYHCAKTG 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +L   A  +GA+   A  ++    R  G  +G  +QLADDLLD
Sbjct: 173 SLFVGAVCAGAL---AVGSDPLPWRSLGSRIGAAYQLADDLLD 212


>gi|167042947|gb|ABZ07661.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote
           HF4000_ANIW137N18]
          Length = 273

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 15/164 (9%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+   +A+E IH ++L+HDD+  MDN  +R G PT H ++D   AI+AG+ L + A+  I
Sbjct: 9   AIAAASAVEMIHNFTLVHDDI--MDNDEMRHGVPTTHKKFDMPLAILAGDVLYSKAYHTI 66

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQKMK 184
           SS K++L  N  +QL+  L+       +  GQ+ DI+  F +  ++        MI+K K
Sbjct: 67  SS-KSKLSSNYTTQLVSKLSKT--CVEICEGQVGDIK--FAENKRIPTGKEYIKMIEK-K 120

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           T  L   +C  GAI A   Q + + L  FG+NLGI+FQ+ DDLL
Sbjct: 121 TAVLFEVSCAMGAICAKRKQKDVKNLSSFGKNLGIVFQITDDLL 164


>gi|288926232|ref|ZP_06420158.1| polyprenyl synthetase [Prevotella buccae D17]
 gi|288337011|gb|EFC75371.1| polyprenyl synthetase [Prevotella buccae D17]
          Length = 323

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 120/221 (54%), Gaps = 17/221 (7%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D+LL     ++ +   DR    L + I+Y L +GGK+IR  L+    +LF  +    L  
Sbjct: 5   DELLQLINRYLDSLPYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSS 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MDN  +RRG+PTVH +++   A+++G+ +L  A++ ++   
Sbjct: 65  ACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAYQRMTECD 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
           + L + +R  L       IG      GQ +D++ E    + E +   + ++KT  L+  A
Sbjct: 123 SHLAEVLR--LFTETALEIG-----EGQQMDMEFETRNDVREEEYIEMIRLKTSVLLACA 175

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GA++A A  ++ + L  FGE +G+ FQL DD LD   D
Sbjct: 176 MKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGD 216


>gi|323352717|ref|ZP_08087687.1| geranyltranstransferase [Streptococcus sanguinis VMC66]
 gi|322121753|gb|EFX93499.1| geranyltranstransferase [Streptococcus sanguinis VMC66]
          Length = 291

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLASGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    + +I   KTG L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKIIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|172057807|ref|YP_001814267.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990328|gb|ACB61250.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
          Length = 320

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   +     +    +RV A++E +H  SL+HDD+  +D+  +RRGKPTV 
Sbjct: 43  GGKRIRPAFVLLASKFGQADRDELVRVAASLELVHMASLVHDDV--IDDAELRRGKPTVM 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +DE  A+ +GN L   A ++I           + +L+  + H   ++ +  G++  I 
Sbjct: 101 QHFDEEVALYSGNFLFGEAVKLIGEVG-------KPELVQVMVH--AMREICEGEIEQIY 151

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  E  +    K    KT  L+  +C  GAI+A+ S  + + LR FG ++G+ FQ+AD
Sbjct: 152 DQYDWEQSIKRYIKRIERKTAILIEASCHLGAIVANCSPEDTKALRQFGRDIGLAFQIAD 211

Query: 226 DLLD 229
           DLLD
Sbjct: 212 DLLD 215


>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 39/219 (17%)

Query: 20  LDDLLLQTASHMQTQHND--------RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
             D ++Q AS +    ++        ++  A+RY+LL G K  + +   CA         
Sbjct: 70  FKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRSNAMPAACA--------- 120

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                  +E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL +AFE +
Sbjct: 121 -------VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEHL 173

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTG 186
           ++  + +  +     +  L  +IG +G++ GQ++DI      D  +D+ +   I   KT 
Sbjct: 174 ATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIH--KTA 231

Query: 187 ALMCFACESGAIMAHASQNEK--------ERLRCFGENL 217
           AL+  A   GA++   S  E         E+ R F ENL
Sbjct: 232 ALLEAAVVLGALLGGGSDEEATYPKLMGLEKSREFAENL 270


>gi|296387401|ref|ZP_06876900.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1]
          Length = 207

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 104/188 (55%), Gaps = 9/188 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L              A 
Sbjct: 12  RVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRAD 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL   AFE+++ 
Sbjct: 67  AAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLAD 126

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
            +   +++     ML+ L    G  GM+GGQ +D+    +  D+  + ++ + KTGAL+ 
Sbjct: 127 TRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIE 186

Query: 191 FACESGAI 198
            +   GA+
Sbjct: 187 ASVRLGAL 194


>gi|315606371|ref|ZP_07881386.1| geranyltranstransferase [Prevotella buccae ATCC 33574]
 gi|315251777|gb|EFU31751.1| geranyltranstransferase [Prevotella buccae ATCC 33574]
          Length = 323

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 120/221 (54%), Gaps = 17/221 (7%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D+LL     ++ +   DR    L + I+Y L +GGK+IR  L+    +LF  +    L  
Sbjct: 5   DELLQLINRYLDSLPYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDDPEKILSS 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MDN  +RRG+PTVH +++   A+++G+ +L  A++ ++   
Sbjct: 65  ACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAYQRMTECD 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
           + L + +R  L       IG      GQ +D++ E    + E +   + ++KT  L+  A
Sbjct: 123 SHLAEVLR--LFTETALEIG-----EGQQMDMEFETRNDVREEEYIEMIRLKTSVLLACA 175

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GA++A A  ++ + L  FGE +G+ FQL DD LD   D
Sbjct: 176 MKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGD 216


>gi|73668941|ref|YP_304956.1| dimethylallyltranstransferase / geranyltranstransferase
           [Methanosarcina barkeri str. Fusaro]
 gi|72396103|gb|AAZ70376.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Methanosarcina barkeri str. Fusaro]
          Length = 321

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 17/229 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  ++++ S  +D  +D+LL          H + L  A RY +  GGK++R  ++   A 
Sbjct: 3   LVDEIKKRSVHVDAAIDELL-------PVAHPEELYKASRYLVDAGGKRLRPAVLILAAE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +  + L    A+E +H ++LIHDD+  MD   IRRG P VH  + +  AI+AG+ L
Sbjct: 56  ATGSDLKSVLPAAVAVELVHNFTLIHDDI--MDKDDIRRGMPAVHTIWGDAGAILAGDTL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180
            + AFEI+S  + +    ++   ++S T       +  GQ LD+   + E + + +   +
Sbjct: 114 YSKAFEILSKVQNEPARILKCMDVISKT----CTEICEGQWLDMDFEKREKVSKAEYIEM 169

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + KT  L   A + GA++  AS      L  +G  +GI FQ+ DD+LD
Sbjct: 170 VEKKTSVLYAAAAKIGALLGGASDEIAAALSEYGRFIGIGFQMYDDVLD 218


>gi|91774308|ref|YP_567000.1| farnesyltranstransferase [Methanococcoides burtonii DSM 6242]
 gi|91713323|gb|ABE53250.1| Bifunctional short chain isoprenyl diphosphate synthase
           [Methanococcoides burtonii DSM 6242]
          Length = 322

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 12/204 (5%)

Query: 31  MQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +   H + L  A RY    GGK++R  ++         + ++ +    A+E +H ++L+H
Sbjct: 22  LPISHPEELYRASRYLPDAGGKRLRPAVLMLSTEAVGGDPMSVIPAAVALELVHNFTLVH 81

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  MDN  +RRG P VH+++    AI+AG+ L + AFEI+S  +   +  ++   +LS
Sbjct: 82  DDI--MDNDDVRRGMPAVHVKWGSEGAILAGDTLYSKAFEILSVMEKDPERILKCVALLS 139

Query: 150 LTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            T       +  GQ +DI+    D   +E  + M++K KT  L   A + GA++  AS  
Sbjct: 140 RT----CTEICEGQWMDIEFENRDTVSEEEYLEMVEK-KTSVLYGAAAKVGALLGGASDE 194

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
             + +  FG  +GI FQ+ DD++D
Sbjct: 195 VADAMYEFGRLVGISFQIQDDVID 218


>gi|134100514|ref|YP_001106175.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291005007|ref|ZP_06562980.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133913137|emb|CAM03250.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 345

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 17/191 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR  LV   A     +  TAL    A+E +H +SL+HDD+  MD    RR + T  
Sbjct: 60  GGKAIRPALVVLAAEAVGGSPATALPAAVAVELVHNFSLLHDDV--MDGDLTRRHRATAW 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +    AI+AG+ LLT A +++++   P  Q    +R       T N  +  ++ GQ+ 
Sbjct: 118 RVFGNGPAILAGDALLTLASDVLAASGHPAAQA--GVR-------TLNTAVLELVDGQVA 168

Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  E  D+  V   Q M   KTGAL+  AC  GA     S  + E LR FGE LG+ FQ
Sbjct: 169 DLAFEKRDDVGVAECQTMVAGKTGALLGCACAVGADFGGGSTEQVEHLRRFGELLGLAFQ 228

Query: 223 LADDLLDCEED 233
             DDLL    D
Sbjct: 229 HVDDLLGIWGD 239


>gi|227485061|ref|ZP_03915377.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236894|gb|EEI86909.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 276

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 113/200 (56%), Gaps = 14/200 (7%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ++L  A+ YA  GGK+IR+FL  E   +F  N++ L   ++  +IE IH YSL+HDDLP+
Sbjct: 30  NKLEEAMVYATDGGKRIRAFLYLETKKMFSQNISELD-YKLAMSIEFIHAYSLVHDDLPA 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA----FEIISSPKTQLKDNIRSQLMLSL 150
           MD+   RRG+ +VH ++ E   I+ G+ LL  A    F+I     + LK    S  +L  
Sbjct: 89  MDDDDYRRGQESVHKKFGEDIGILTGDALLNEAALILFDIGIKDSSYLK---ASSYILER 145

Query: 151 THNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
                  GM+ GQ++D++ E   D + +  + K KT  L   AC + A+ ++ ++    +
Sbjct: 146 ASRF---GMIEGQVMDLRRESTYDLSYLLEVYKKKTSDLFKAACLAAALTSNQTEYTYRK 202

Query: 210 LRCFGENLGIIFQLADDLLD 229
           +  F ENLG+ FQ+ DDLL+
Sbjct: 203 IEVFAENLGLAFQIQDDLLE 222


>gi|37528167|ref|NP_931512.1| hypothetical protein plu4337 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787604|emb|CAE16709.1| crtE [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 300

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 7/192 (3%)

Query: 36  NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDL 92
           +D++ +A+R + L+ GK+IR  L+         N      L++ +AIE +H  SLI DDL
Sbjct: 36  DDKVCAAMRESTLVSGKRIRPLLLLLIVLDLGENPWKTDFLQLASAIEIVHAASLILDDL 95

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN   RRG+P +H QY E  AI+A   LL+ AF +I   +T L +  +S  +  L+H
Sbjct: 96  PCMDNAEYRRGRPAIHRQYGESVAILAAVALLSRAFGLIV--ETNLSEYDKSAAVAILSH 153

Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +GL G++ GQ  D+ +     +   +     +KTG L     +  AI  +A    ++ L
Sbjct: 154 TVGLNGLVQGQFRDLNNTLCAGNYHAIATTNDLKTGLLFDTTFQLAAIAVNAPDIIRQAL 213

Query: 211 RCFGENLGIIFQ 222
           R   ++LG  FQ
Sbjct: 214 RHVSQHLGQAFQ 225


>gi|78483936|dbj|BAE47470.1| GGPP synthase [Paracoccus sp. N81106]
          Length = 293

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 2/188 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           AL  GK+ R  L+   A        T +    A+E +H  SLI DDLP MD+  +RRG+ 
Sbjct: 39  ALSSGKRFRGMLMLLAAEASGGVCDTIVDAACAVEMVHAASLIFDDLPCMDDAGLRRGQS 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             H+ + E  A++ G  L+T A  +++  +      +R+QL+  L+ ++G QG+  GQ L
Sbjct: 99  ATHVAHGESRAVLGGIALITEAMALLAGARGA-SGTVRAQLVRILSRSLGPQGLCAGQDL 157

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+     +   V   Q +KTG L     E  A++      E+ ++  FG  LG +FQ  D
Sbjct: 158 DLH-AAKNGAGVEQEQDLKTGVLFIAGLEMLAVIKEFDAEEQTQMIDFGRQLGRVFQSYD 216

Query: 226 DLLDCEED 233
           DLLD   D
Sbjct: 217 DLLDVVGD 224


>gi|189345859|ref|YP_001942388.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
 gi|189340006|gb|ACD89409.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
          Length = 332

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 19/227 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           ++E  +R    ++D L   A        + L +  RY + G GK+IR FL    +     
Sbjct: 10  VEEKYRRYHKRINDAL---AGCFSADKPETLYAPARYIIEGKGKRIRPFLTLLASESVCG 66

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   AL    A+E +H ++L+HDD+  MD   +R G+P VH Q++   AI++G+ ++ YA
Sbjct: 67  SSENALNAALAVEILHNFTLMHDDI--MDAADLRHGRPAVHKQWNTNVAILSGDMMIAYA 124

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDETQVF----MIQK 182
           +E+    KT+       +L+  L H NI +     GQ LD++ E      +     MI K
Sbjct: 125 YELALQSKTER----HRELIHILNHANITI---CEGQALDMELELKKNATISDYLDMIAK 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KTG L+  A E+G +  + +Q +   L  FGE +G  FQ+ DD LD
Sbjct: 178 -KTGRLISAALEAGGVAGNGTQEQLNALVTFGEKIGRAFQIQDDFLD 223


>gi|325300424|ref|YP_004260341.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319977|gb|ADY37868.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170]
          Length = 327

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 20/206 (9%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   + Y L +GGK+IR  L+    +LF  +    L    A+E  H ++L+HDDL  MD 
Sbjct: 29  LYKPVEYVLGIGGKRIRPTLMLLAYNLFKEDVHAVLSQAMALETYHNFTLLHDDL--MDK 86

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGL--LTYAFEIISSPKTQLKD--NIRSQLMLSLTHN 153
              RRGKPTVH Q+DE  AI++G+ +  L+Y F +   P   ++    + SQ  L +   
Sbjct: 87  ADRRRGKPTVHKQWDENAAILSGDAMVMLSYQFMMKDCPAMYVRPVMEVFSQTALEICE- 145

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                   GQ  D++ E    +   +   + ++KT  L+  A + GAI+  AS+ + ++L
Sbjct: 146 --------GQQWDMEFERRQDVTAGEYMEMIRLKTSVLLAGALKIGAILGGASEADAQKL 197

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
              G  +G+ FQL DD LD   D PK
Sbjct: 198 YDLGIRIGLAFQLQDDYLDVYGD-PK 222


>gi|167043490|gb|ABZ08187.1| putative Polyprenyl synthetase [uncultured marine microorganism
           HF4000_APKG2H5]
          Length = 575

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 122/231 (52%), Gaps = 30/231 (12%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSF---LVTECASLFNVNH 69
           KR++ I+ D L      MQ    +RL  A+ +   GG K++R+    LV E     +  H
Sbjct: 261 KRVEGIIMDSL----GKMQ---QERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDGH 313

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            T   +GA+IE IH ++L+HDD+  +D   IRRG   VH+ YD+ TAI AG+ +L   FE
Sbjct: 314 YT---LGASIEIIHNFTLVHDDI--IDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFE 368

Query: 130 IIS-SPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDE----FIDETQVFMIQK 182
           I++ SP+      I +  +  L   IG  ++ +  GQ  DI+ E      +E  + MI  
Sbjct: 369 ILAESPE------IDADKLAFLVSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITG 422

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT A+      +GAI+A AS    + +  +G NLG+ FQL DDL+D   D
Sbjct: 423 -KTSAMFETCATTGAILAGASDEIVDNMAIWGLNLGLCFQLMDDLIDITGD 472


>gi|294501072|ref|YP_003564772.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
           QM B1551]
 gi|294351009|gb|ADE71338.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
           QM B1551]
          Length = 321

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 24/216 (11%)

Query: 32  QTQHNDRLL---SAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYS 86
           QT H D  L   +++     GGK+IR   V   A    +N++ +    V  A+E IH  S
Sbjct: 23  QTVHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIK--HVAVALELIHMAS 80

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+  +D+   RRGKPT+  ++D   A+  G+ +   A E++S  K      I S  
Sbjct: 81  LVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVKDVEAHKILSNT 138

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHAS 203
           M+ LT          G++  I+D++      +V++ + K KT  L+  +C+ GAI A A 
Sbjct: 139 MVELTL---------GEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGAIAAGAP 189

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           ++  +RL  FG  +G+ FQ+ DD+LD    EE L K
Sbjct: 190 EDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGK 225


>gi|118602494|ref|YP_903709.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567433|gb|ABL02238.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 284

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 9/206 (4%)

Query: 30  HMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           H+  Q +  L  AIRY+ L  GK+ R  L    A++FN N         A+E IH YSLI
Sbjct: 17  HLSAQGS--LAKAIRYSTLANGKRFRPILAYCVANIFNTNLNLVDSSSCAVEFIHTYSLI 74

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MD+  IR  +P  H ++ E  AI+AG+GL   AFE++ +    +  +I+ +L+ 
Sbjct: 75  HDDLPAMDDDDIRHNQPVCHKRFGEAQAILAGDGLQALAFEVLVNDDL-ISADIKIELLK 133

Query: 149 SLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           SLTH      M+ GQ +D+    + ++   +  + + KTGAL+  A   GAI++    N+
Sbjct: 134 SLTH--ASFEMVEGQAIDLSIIAKQVNIATLETMHRKKTGALLSCAVNLGAIVSKMCNNK 191

Query: 207 KER-LRCFGENLGIIFQLADDLLDCE 231
               L  F +++G+ +Q+ DD+LD E
Sbjct: 192 DSVILNTFSKDIGLAYQIQDDVLDIE 217


>gi|325697091|gb|EGD38978.1| geranyltranstransferase [Streptococcus sanguinis SK160]
          Length = 291

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 113/201 (56%), Gaps = 6/201 (2%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91
           Q +  L   I Y++  GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDD
Sbjct: 22  QVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+   RRG+ T H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+
Sbjct: 82  LPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELS 139

Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM+ GQ+LD+Q E   I    +  I   KTG L+ +   +  ++  A Q+ +++
Sbjct: 140 LAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSVQDK 199

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           LR  GE LG+ FQ+ DD+LD 
Sbjct: 200 LRRIGELLGLAFQVRDDILDV 220


>gi|193213417|ref|YP_001999370.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086894|gb|ACF12170.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 332

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 22/211 (10%)

Query: 28  ASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           A+    Q  + L +  RY L G GK+IR FL    +   + +   AL V   IE +H ++
Sbjct: 26  AACFPKQSPETLYAPARYILEGKGKRIRPFLTLLASEAVSGSSENALGVALGIEVLHNFT 85

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI----ISSPKTQLKDNI 142
           L+HDD+  MD   +R G+PTVH Q+D   AI++G+ ++ YA+E+    ISS         
Sbjct: 86  LMHDDI--MDAADLRHGRPTVHKQWDVNAAILSGDMMIAYAYELALKAISS--------- 134

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAI 198
           R   M+ + ++  +  +  GQ LD++ E   +  +     MI K KTG L+  A E+G +
Sbjct: 135 RHAEMIHIFNDANIT-ICEGQALDMELEQRKDVTIADYLDMISK-KTGRLISAALEAGGV 192

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             + +  +   L  FGE +G  FQ+ DD LD
Sbjct: 193 AGNGTPEQIAALVTFGEKIGRAFQIQDDYLD 223


>gi|328945558|gb|EGG39709.1| geranyltranstransferase [Streptococcus sanguinis SK1087]
          Length = 291

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|145220349|ref|YP_001131058.1| geranyltranstransferase [Prosthecochloris vibrioformis DSM 265]
 gi|145206513|gb|ABP37556.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Chlorobium phaeovibrioides DSM 265]
          Length = 335

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 20/199 (10%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +  RY L G GK+IR FL    +   + +    ++V  A+E +H ++L+HDD+  MD 
Sbjct: 40  LYAPARYILEGKGKRIRPFLTLLASEAVSGSSDNTMKVALAVEVLHNFTLMHDDI--MDE 97

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGL 156
             +R  +PTVH ++D+  AI++G+ ++ Y++E+      Q + +   +L+  L H NI +
Sbjct: 98  ADLRHNRPTVHRKWDDNVAILSGDMMIAYSYEL----ALQAESHRHCELIHILNHANITI 153

Query: 157 QGMLGGQMLDIQDEFIDETQVF------MIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                GQ LD+  E  D+T         MI K KTG L+  A E+G + A A++ +   L
Sbjct: 154 ---CEGQALDM--ELEDKTDATIADYLDMISK-KTGRLISAALEAGGVAADATKEQLMSL 207

Query: 211 RCFGENLGIIFQLADDLLD 229
             FGE +G  FQ+ DD LD
Sbjct: 208 VTFGEKIGRAFQIQDDYLD 226


>gi|332884305|gb|EGK04573.1| hypothetical protein HMPREF9456_00900 [Dysgonomonas mossii DSM
           22836]
          Length = 325

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 12/199 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L     +L+  +    + +   IE  H ++L+HDDL  MD 
Sbjct: 30  LFEPISYILSLGGKRVRPALSLMSYNLYKEDVERVIPIALGIEIFHNFTLLHDDL--MDR 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG PTVHI++++ TA+++G+ +L  A++ I+   +Q    +      + T      
Sbjct: 88  ADMRRGNPTVHIKWNDNTAVLSGDAMLIEAYKEIAKIDSQYLKPVLDLFSTTATE----- 142

Query: 158 GMLGGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ  D++ ++ +D T  +   + ++KT  L+  + + GAI+A AS  + E L  +G
Sbjct: 143 -ICCGQQYDMEFEQRMDVTIAEYLEMIRLKTAVLLACSLKEGAIVAGASAEDAENLYNYG 201

Query: 215 ENLGIIFQLADDLLDCEED 233
            ++G+ FQL DDLLD   D
Sbjct: 202 IHVGLGFQLMDDLLDVYGD 220


>gi|295706420|ref|YP_003599495.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
           DSM 319]
 gi|294804079|gb|ADF41145.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
           DSM 319]
          Length = 321

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 24/216 (11%)

Query: 32  QTQHNDRLL---SAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYS 86
           QT H D  L   +++     GGK+IR   V   A    +N++ +    V  A+E IH  S
Sbjct: 23  QTVHTDETLITDASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIK--HVAVALELIHMAS 80

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+  +D+   RRGKPT+  ++D   A+  G+ +   A E++S  K      I S  
Sbjct: 81  LVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVKDVEAHKILSNT 138

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHAS 203
           M+ LT          G++  I+D++      +V++ + K KT  L+  +C+ GAI A A 
Sbjct: 139 MVELTL---------GEIEQIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGAIAAGAP 189

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           ++  +RL  FG  +G+ FQ+ DD+LD    EE L K
Sbjct: 190 EDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGK 225


>gi|332363439|gb|EGJ41222.1| geranyltranstransferase [Streptococcus sanguinis SK355]
          Length = 291

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELTEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|315223294|ref|ZP_07865155.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
 gi|315187726|gb|EFU21480.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
          Length = 300

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 119/205 (58%), Gaps = 9/205 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMD 96
           L+ AI Y++  GGK+IR  L+ E      +    A  +V AA+E IH  SLIHDDLP+MD
Sbjct: 27  LIEAILYSVNAGGKRIRPLLLLELLEGLGMELTEAHFQVAAALEMIHTGSLIHDDLPAMD 86

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +   RRG+   H ++ E  AI+AG+ L   ++ +I+  +  L   I+  L+  L+   G 
Sbjct: 87  DDDYRRGRLPSHKKFGEAMAILAGDSLFLDSYALIA--EAALPSQIKVNLIAELSLAAGT 144

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+GGQ+LD+Q E  D +  ++  I   KTG L+ +   +  ++A   ++++E+L+  G
Sbjct: 145 FGMVGGQVLDMQGEGKDISLAELQTIHANKTGKLLTYPFIAAGLIAEVGESQQEKLKAIG 204

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
           + LG+ FQ+ DD+LD     EDL K
Sbjct: 205 QLLGLAFQVRDDILDITANFEDLGK 229


>gi|260061041|ref|YP_003194121.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501]
 gi|88785173|gb|EAR16342.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501]
          Length = 325

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 103/196 (52%), Gaps = 12/196 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y + LGGK++R  LV   A LF      AL   AA+E  H +SL+HDD+  MD 
Sbjct: 28  LYEPIGYIMDLGGKRMRPVLVLLSAELFGAPAENALPAAAAVEIFHNFSLVHDDI--MDA 85

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+PTVH ++D  TAI++G+ +L  A++ +     +L      Q +  L     L+
Sbjct: 86  APLRRGRPTVHRKWDPNTAILSGDAMLIRAYQQLDGYPPEL-----FQPLTRLFSRTALE 140

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ  D+  E  D+  +    +M   KT  L+  A + GAI+  A   E+E +  FG
Sbjct: 141 -VCEGQQYDMDFESRDDVGIPEYLRMIEFKTAVLLGCALQMGAIIGGAEVAEQEAVYDFG 199

Query: 215 ENLGIIFQLADDLLDC 230
             LG+ FQL DD LD 
Sbjct: 200 IRLGLAFQLQDDYLDV 215


>gi|327458743|gb|EGF05091.1| geranyltranstransferase [Streptococcus sanguinis SK1057]
          Length = 291

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|325955638|ref|YP_004239298.1| polyprenyl synthetase [Weeksella virosa DSM 16922]
 gi|323438256|gb|ADX68720.1| Polyprenyl synthetase [Weeksella virosa DSM 16922]
          Length = 323

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 14/197 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L +GGK+IR  +V     +FN     A++   A+E  H ++L+HDD+  MD+
Sbjct: 27  LYEPIEYILGIGGKRIRPLIVLMGNQMFNGLIEDAVKPAIAMEYFHNFTLMHDDI--MDS 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRGK  VHI+Y   +AI++G+ +L  A+E++   P    K+ IR      L +   +
Sbjct: 85  APLRRGKEAVHIKYGINSAILSGDTMLIRAYELLEDLPNDVFKEAIR------LFNKTAI 138

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTG--ALMCFAC-ESGAIMAHASQNEKERLRCF 213
           + +  GQ  D+  E   E       KM  G  A++  AC + GA++A A + E +RL   
Sbjct: 139 E-LCEGQQYDVNYETQKEISFEDYYKMIKGKTAVLVGACLKLGALIAGAPKEEADRLYEI 197

Query: 214 GENLGIIFQLADDLLDC 230
           G NLGI +QL DD LD 
Sbjct: 198 GLNLGIAYQLKDDYLDV 214


>gi|332291452|ref|YP_004430061.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169538|gb|AEE18793.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 324

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 107/206 (51%), Gaps = 12/206 (5%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
            H   +    L   I Y L LGGK++R  L      LF  +H  AL    AIE  H +SL
Sbjct: 17  KHTLEKEPKNLYDPINYILGLGGKRLRPVLTLMACELFEKDHAIALDAALAIEIFHNFSL 76

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++  + +    D  +   +
Sbjct: 77  VHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLIRAYQLFENYEG---DTFKE--L 129

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
             L     ++ +  GQ  D+  E  D+  +    KM   KT  L+  A + GAI+A AS+
Sbjct: 130 AKLFSKTAIE-VCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAIVAGASK 188

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
             +E +  +G +LG+ FQL DD LD 
Sbjct: 189 TCQEAIYNYGRDLGLAFQLQDDYLDA 214


>gi|325680723|ref|ZP_08160261.1| polyprenyl synthetase [Ruminococcus albus 8]
 gi|324107503|gb|EGC01781.1| polyprenyl synthetase [Ruminococcus albus 8]
          Length = 297

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 112/203 (55%), Gaps = 19/203 (9%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMD 96
           +L A+ Y+L  GGK++R  L+ E   +     L   L++  ++E IH YSLIHDDLP MD
Sbjct: 34  VLEAMEYSLTAGGKRLRPMLMLEFYRMCGGEDLDKMLKLACSVELIHTYSLIHDDLPCMD 93

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNI 154
           +   RRGKP+ H  + E  A++AG+ L T AFE+IS    +   +    +ML   L+  I
Sbjct: 94  DDDYRRGKPSCHKAFPENIALLAGDALNTLAFEVISECAMEGTISADKAVMLISVLSKAI 153

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ++D+Q  +E I    +  +Q  KTGAL+  AC  G I A        RL  
Sbjct: 154 GTDGMIGGQVIDLQTENEEISIETLNTLQSCKTGALIEAACVMGVIAAG-------RLDL 206

Query: 213 ------FGENLGIIFQLADDLLD 229
                 + + +G  FQ+ DD+LD
Sbjct: 207 IPAAADYAQAMGRAFQIVDDILD 229


>gi|254427009|ref|ZP_05040716.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
 gi|196193178|gb|EDX88137.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
          Length = 307

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 22/232 (9%)

Query: 8   KLQENSK-RIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
           +L E +K R++  LD  L  Q+A+        RL  A+RYA L GGK+IR  LV   A L
Sbjct: 19  QLTETAKARLEQALDHYLPAQSAA-------SRLSQAMRYAALSGGKRIRPLLVYGAAQL 71

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +   A     A+E IH YSL+HDDLP+MD+  +RRG+ T H  +DE TAI+AG+ L 
Sbjct: 72  AGASAAQADVPAVAVELIHAYSLVHDDLPAMDDDDLRRGQATCHKAFDEATAILAGDTLH 131

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM- 183
           T AFE+++      + + R  L+  L    G+ GM  GQM D+  +   +T V  +++M 
Sbjct: 132 TRAFELLAC-HGDYRSDSRIALIQHLCQAAGVDGMAAGQMQDMLAQGQQQT-VAALEEMH 189

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLD 229
             KTG L+  + + G     A++N+   L      FG+ +G+ FQ+ DD+LD
Sbjct: 190 YLKTGRLITASLQLGYF---AAENDDPALLSNLTDFGDAIGLAFQIQDDILD 238


>gi|333029215|ref|ZP_08457276.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
 gi|332739812|gb|EGJ70294.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
          Length = 324

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 17/204 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L +GGK+IR  L+     L+  +    L    AIE  H ++L+HDDL  MD 
Sbjct: 27  LYEPIHYVLSIGGKRIRPILMLLAYQLYKDDLEKTLPAACAIEVYHNFTLLHDDL--MDK 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
             +RR KPTVH  ++  TAI++G+ +L  ++ +++ +P+  L        +L+  + + L
Sbjct: 85  SDLRRNKPTVHNVWNANTAILSGDAMLILSYHLLAKAPQENL------SAVLNEFNKVTL 138

Query: 157 QGMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           + +  GQ  DI+ E  +    E  + MI ++KT  L+  + + GAI+A AS  +   L  
Sbjct: 139 E-ICEGQQYDIEFETKNSVKAEDYLDMI-RLKTAVLLASSIKMGAIIAGASDEDTNLLYD 196

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           FG N+G+ FQL DD LD   D PK
Sbjct: 197 FGLNVGLAFQLQDDYLDVYGD-PK 219


>gi|145588381|ref|YP_001154978.1| farnesyltranstransferase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046787|gb|ABP33414.1| Farnesyltranstransferase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 334

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 101/183 (55%), Gaps = 10/183 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  L+   A        +A  L + A +E IH  +L+HDD+  +D   +RRG+ T
Sbjct: 50  GGKRVRPALLMLVAKALANGKESAHTLEMAAVVEFIHTATLLHDDV--VDESTLRRGRET 107

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +    +++ G+ L + AF+++ +P     +++R   +LS   N   +G +  Q+L+
Sbjct: 108 ANAAFGNAASVLVGDFLYSRAFQMMVAP-----NDLRVMQILSDATNTIAEGEVL-QLLN 161

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + D  +DE     + + KT  L   + E GAI+A A+ +++E+   FG ++G  FQL DD
Sbjct: 162 MNDPEVDEASYLQVIRYKTAKLFEASTELGAILASATDSQREQAAAFGRHIGTAFQLMDD 221

Query: 227 LLD 229
           LLD
Sbjct: 222 LLD 224


>gi|315229911|ref|YP_004070347.1| dimethylallyltransferase [Thermococcus barophilus MP]
 gi|315182939|gb|ADT83124.1| dimethylallyltransferase [Thermococcus barophilus MP]
          Length = 342

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 13/197 (6%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y L GGK++R F+V   A     +   AL   AAIE +H Y+LIHDD+  MD    RRG+
Sbjct: 41  YPLAGGKRVRPFVVLTAAEAVGGDWRKALYPAAAIEILHTYTLIHDDIMDMDE--TRRGR 98

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--MLGG 162
            TVH  +    AI+AG+ + +  F+  +      K  + ++ ++ +   I   G  +  G
Sbjct: 99  ATVHKVWGINMAILAGDLMYSVVFDAAT------KAPVSAEKIVEIVRAIARAGIEICEG 152

Query: 163 QMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           Q LD++ E  D   +    KM   KT AL   + + G I+   +Q   + L  +G N+G+
Sbjct: 153 QALDLEFETRDTVTIEEYLKMIDGKTAALFDASAKIGGIIGTDNQEYIQALSKYGRNVGM 212

Query: 220 IFQLADDLLDCEEDLPK 236
            FQ+ DD+LD   D  K
Sbjct: 213 AFQIWDDVLDLIADEKK 229


>gi|15922378|ref|NP_378047.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str.
           7]
 gi|15623167|dbj|BAB67156.1| 329aa long hypothetical geranylgeranyl pyrophosphate synthetase
           [Sulfolobus tokodaii str. 7]
          Length = 329

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 7/183 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A L   +   A   GA++E +H ++LIHDD+  MD    RRG PTVH
Sbjct: 40  GGKRLRPLILVSSADLLGGDLNRAYLAGASVEVLHTFTLIHDDI--MDEDTTRRGMPTVH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +++    AI+AG+ L   AFEI++     +  N  ++     T  I +  +  GQ LD+Q
Sbjct: 98  VKWGIPMAILAGDLLHAKAFEILNEAFRGMSSNKITRAFEIFTKAIII--ISEGQALDMQ 155

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    + E +   + K KT  L   +   G ++A  ++ E + L  +G NLGI FQ+ D
Sbjct: 156 FEDKVTVSEEEYLDMIKRKTAMLFSSSAALGGLIATDNEKEIQALADYGLNLGISFQIVD 215

Query: 226 DLL 228
           D+L
Sbjct: 216 DIL 218


>gi|254475222|ref|ZP_05088608.1| decaprenyl diphosphate synthase [Ruegeria sp. R11]
 gi|214029465|gb|EEB70300.1| decaprenyl diphosphate synthase [Ruegeria sp. R11]
          Length = 406

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 16/230 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L E    ++T++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 87  LAATLSEEMAAVNTLIR-------TRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 139

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +    +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 140 LCGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 197

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +F+++    +    +I +    ++     LQ      M    D   DE     + + 
Sbjct: 198 FARSFQLMVETGSLRVLDILANASATIAEGEVLQ------MTAASDLATDEDIYLQVVRG 251

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT AL   A ++G ++A AS+ E + L  +G+ LGI FQ+ADDLLD + D
Sbjct: 252 KTAALFSAATQAGGVIAEASEAEVDALYAYGDALGIAFQIADDLLDYQGD 301


>gi|167043397|gb|ABZ08099.1| putative Polyprenyl synthetase [uncultured marine microorganism
           HF4000_APKG1C9]
          Length = 575

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 22/195 (11%)

Query: 49  GGKKIRSF---LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R+    LV E     +  H T   +GA+IE IH ++L+HDD+  +D   IRRG  
Sbjct: 290 GGKRLRAIIPRLVGEAVGEAHDGHYT---LGASIEIIHNFTLVHDDI--IDQDPIRRGLD 344

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG--LQGMLGG 162
            VH+ YD+ TAI AG+ +L   FEI++ SP+      I +  +  L   IG  ++ +  G
Sbjct: 345 AVHVAYDDATAINAGDAMLAVGFEILAESPE------IDADKLAFLVSTIGEMVRKVAEG 398

Query: 163 QMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           Q  DI+ E      +E  + MI   KT A+      +GAI+A AS    + +  +G NLG
Sbjct: 399 QQDDIEFEQRNTVTEEDYIAMITG-KTSAMFETCATTGAILAGASDEIVDNMAIWGLNLG 457

Query: 219 IIFQLADDLLDCEED 233
           + FQL DDL+D   D
Sbjct: 458 LCFQLMDDLIDITGD 472


>gi|167647338|ref|YP_001685001.1| polyprenyl synthetase [Caulobacter sp. K31]
 gi|167349768|gb|ABZ72503.1| Polyprenyl synthetase [Caulobacter sp. K31]
          Length = 322

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   ++   L++ AA+E IH  +L+HDD+  +D   +RRGK   H
Sbjct: 41  GGKRLRPLLTVATARLAGSDNAACLKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L   AFE++    +     +R+  +L+    +  +G +  Q+    
Sbjct: 99  LIWGAAQSVLVGDFLFARAFELMVETSS-----MRALEILAKASRVIAEGEVL-QLTRSH 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + +     I   KT  L   A E+G + A  S ++ E LR +G NLG+ FQLADD L
Sbjct: 153 DLNLSQALYLEIIAAKTAELFAAASEAGGVSAGVSADKSEALRAYGMNLGLAFQLADDAL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|327461660|gb|EGF07991.1| geranyltranstransferase [Streptococcus sanguinis SK1]
 gi|327489513|gb|EGF21306.1| geranyltranstransferase [Streptococcus sanguinis SK1058]
          Length = 291

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V +A+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|67008257|emb|CAJ00342.1| putative geranylgerannylpyrophosphate synthase [Andrographis
           paniculata]
          Length = 141

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 87/141 (61%), Gaps = 6/141 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKPT H  Y E  A++AG+ LL +AFE +++    +  N+    +  L+  IG +G+
Sbjct: 1   LRRGKPTNHKVYGEDVAVLAGDALLAFAFEHLATATEDVPTNMVVSAIGELSRCIGAEGL 60

Query: 160 LGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + GQ++DI  E I E  + +++ +   KT AL+  +   GAI+  A+++E ERLR F   
Sbjct: 61  VAGQVVDICSEGISEVGLELLEFIHLHKTAALLEGSVVLGAILGGATESEVERLRKFARC 120

Query: 217 LGIIFQLADDLLD---CEEDL 234
           +G++FQ+ DD+LD   C E+L
Sbjct: 121 IGLLFQVVDDILDVTKCSEEL 141


>gi|121998764|ref|YP_001003551.1| polyprenyl synthetase [Halorhodospira halophila SL1]
 gi|121590169|gb|ABM62749.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1]
          Length = 307

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 126/242 (52%), Gaps = 21/242 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           +   LP  L+E ++R         L+ A      H   +  A+RYA+LGG K++R  LV 
Sbjct: 13  LEAALP-PLRERAERA--------LEAALPAADAHPTGIHEAMRYAVLGGGKRMRPILVY 63

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                 +           A+E IH YSL+HDDLP+MD+  +RRG+PT H  YDE TAI+ 
Sbjct: 64  ATGQALDHTGRALDAPACAVEMIHAYSLVHDDLPAMDDDDLRRGQPTCHRAYDEPTAILV 123

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQ--DEFIDET 175
           G+ L   AFE+++  + +      ++  +  +L    G  GM+GGQ +D+      +D  
Sbjct: 124 GDALQARAFELLADGEREGAPAPAARAGMVHALARAAGSGGMVGGQAIDLAAVGRQLDAA 183

Query: 176 QVFMIQKMKTGALMCFACESGAIMA----HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           ++  +   KTGAL+  + + GA+ +     A+ N  +R   + + +G+ FQ+ DD+LD E
Sbjct: 184 ELEDMHIHKTGALIRASVQLGALASGPTCAATLNALDR---YAKCVGLAFQIHDDVLDVE 240

Query: 232 ED 233
            D
Sbjct: 241 GD 242


>gi|62959181|gb|AAY23698.1| farnesyl diphosphate synthase [Halomonas sp. JL-104]
 gi|62959191|gb|AAY23703.1| farnesyl diphosphate synthase [Paracoccus sp. JL-65]
          Length = 143

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 85/135 (62%), Gaps = 6/135 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQG 158
           +RRG PT H  Y E  AI++G+ LLT +FE+++ SP     D  + +++  L+   G +G
Sbjct: 12  LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSP---FDDRSKVKIISMLSKAAGAEG 68

Query: 159 MLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           M+GGQ+ DI+ E +  +  Q+  + K KTG L+ FA  +G +++   ++E  +LR F E+
Sbjct: 69  MVGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEH 128

Query: 217 LGIIFQLADDLLDCE 231
           +G+ FQ+ DD+LD E
Sbjct: 129 IGLAFQIRDDILDVE 143


>gi|62959185|gb|AAY23700.1| farnesyl diphosphate synthase [Bacillus sp. JL-26]
          Length = 143

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 85/135 (62%), Gaps = 6/135 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQG 158
           +RRG PT H  Y E  AI++G+ LLT +FE+++ SP     D  + +++  L+   G +G
Sbjct: 12  LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSP---FDDRSKVKIISMLSKAAGAEG 68

Query: 159 MLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           M+GGQ+ DI+ E +  +  Q+  + K KTG L+ FA  +G +++   ++E  +LR F E+
Sbjct: 69  MVGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEH 128

Query: 217 LGIIFQLADDLLDCE 231
           +G+ FQ+ DD+LD E
Sbjct: 129 IGLAFQIRDDILDVE 143


>gi|62959195|gb|AAY23705.1| farnesyl diphosphate synthase [Micrococcus sp. JL-76]
          Length = 143

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 85/135 (62%), Gaps = 6/135 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQG 158
           +RRG PT H  Y E  AI++G+ LLT +FE+++ SP     D  + +++  L+   G +G
Sbjct: 12  LRRGLPTNHKVYGEAVAILSGDALLTKSFELVADSP---FDDRSKVKIISMLSKAAGAEG 68

Query: 159 MLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           M+GGQ+ DI+ E +  +  Q+  + K KTG L+ FA  +G +++   ++E  +LR F E+
Sbjct: 69  MVGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEH 128

Query: 217 LGIIFQLADDLLDCE 231
           +G+ FQ+ DD+LD E
Sbjct: 129 IGLAFQIRDDILDVE 143


>gi|327473380|gb|EGF18800.1| geranyltranstransferase [Streptococcus sanguinis SK408]
          Length = 291

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V +A+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|268608471|ref|ZP_06142198.1| Polyprenyl synthetase [Ruminococcus flavefaciens FD-1]
          Length = 297

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 123/222 (55%), Gaps = 6/222 (2%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
           S+ I  + ++L    A   +T+    L+ A+ Y+L  GGK+IR  LV    +    +   
Sbjct: 9   SEYISLVEENLRKYNAHSPETEAQKDLIEAMNYSLEAGGKRIRPVLVYAFCNALGGDTGN 68

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A    AAIE IH +SLIHDDLP+MD+   RRG+ + H  + E  AI+AG+ L    F +I
Sbjct: 69  AAAPAAAIEMIHTFSLIHDDLPAMDDDDYRRGRLSCHKAHGEAMAILAGDALSVLPFGLI 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188
           +  + +L    + +++  L   +G  GM+GGQ++D+Q+E    +DE  +  + + KTG L
Sbjct: 129 ADDE-KLSPEQKIRIISELARAVGKNGMIGGQVIDMQNEQRNDVDEANLRNMYRHKTGEL 187

Query: 189 MCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLD 229
           +  +C  G I A  + +   E  + +G  LG+ FQ+ DD+LD
Sbjct: 188 ISVSCIMGCICAGCTDSTIIEAAKEYGYKLGLAFQIIDDILD 229


>gi|62959219|gb|AAY23717.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP1768]
          Length = 145

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 86/145 (59%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+PSMDN  +RRG+PT H  Y +  AI+AG+ +L+ AFE+++     +  +   +++ 
Sbjct: 1   HDDMPSMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPADRLLRVVG 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L    G  G++GGQ++D++ E   +D   +  I   KT AL+     +GA++  A+  +
Sbjct: 61  ELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKTAALLRACVVTGALIGGANDEQ 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
            + +R +   +G+ FQ+ DD+LD E
Sbjct: 121 LQAMRTYANGIGLAFQIIDDILDVE 145


>gi|194335564|ref|YP_002017358.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308041|gb|ACF42741.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 337

 Score = 95.5 bits (236), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 14/196 (7%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L +  RY L G GK+IR FL    +     +   AL V  A+E +H ++LIHDD+  MD 
Sbjct: 42  LYAPARYILEGKGKRIRPFLTLLASEAVCGSSEHALNVALAVEILHNFTLIHDDI--MDQ 99

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R G+PTVH +++   AI+ G+ ++ YA+E+    +++     R   ++ + ++  + 
Sbjct: 100 AELRHGRPTVHRRWNTNAAILTGDMMIAYAYELALEAQSE-----RHGELVHILNDANIT 154

Query: 158 GMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +  GQ LDI+ E  ++  +     MI K KTG L+  A E+G +   A+  +   L  F
Sbjct: 155 -ICEGQALDIELEEKNDATIADYLDMIAK-KTGRLISAALEAGGVAGDATDEQLRSLVLF 212

Query: 214 GENLGIIFQLADDLLD 229
           GE +G  FQ+ DD LD
Sbjct: 213 GEKIGQAFQIQDDYLD 228


>gi|289806419|ref|ZP_06537048.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 153

 Score = 95.5 bits (236), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 2/126 (1%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 28  QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L T AF IIS +P  ++ D  R  ++  L +
Sbjct: 88  AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELAN 147

Query: 153 NIGLQG 158
             G+ G
Sbjct: 148 ASGIAG 153


>gi|258647197|ref|ZP_05734666.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
           51259]
 gi|260853026|gb|EEX72895.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
           51259]
          Length = 321

 Score = 95.5 bits (236), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 18/202 (8%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I YAL GG K++R  L     SL++ +   A+    ++E  H ++L+HDDL  MD 
Sbjct: 24  LYEPIAYALSGGGKRVRPHLTLLACSLYSDDPEKAIPAALSVETYHNHTLLHDDL--MDG 81

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNI 154
             +RRG+PTV  ++D  TAI++G+ +L  AF  +     P         ++L+  L    
Sbjct: 82  ADLRRGRPTVFRKWDANTAILSGDTMLILAFNHLLEGGYPNA-------AELLQLLARTA 134

Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
             + +  GQ  D+   Q   + E +   + ++KT  L+  A + GA++A A  ++ + L 
Sbjct: 135 --REVCEGQQYDMNFEQRNDVTEAEYIEMIRLKTSVLLACALKMGALVAGAPADQADLLY 192

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FGE +G+ FQL DD LDC  D
Sbjct: 193 HFGEQIGLAFQLQDDYLDCYGD 214


>gi|224536141|ref|ZP_03676680.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522223|gb|EEF91328.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 324

 Score = 95.5 bits (236), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 14/197 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L + + Y L +GGK+IR  L+    +L+  +          IE  H Y+L+HDDL  MD 
Sbjct: 27  LYAPVEYVLSMGGKRIRPVLMLLAYNLYKEDVTRIYAPATGIEVYHNYTLLHDDL--MDR 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
              RRGK TVH  +++ TAI++G+ +L  A++ ++  P T LK+ +    + SLT    L
Sbjct: 85  ADRRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAECPSTFLKEVMD---LFSLT---AL 138

Query: 157 QGMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +   G QM    + +++   E  + MI ++KT  L+  + + GA +  AS  + +RL  F
Sbjct: 139 EICEGQQMDMEFEQRNDVTAEEYLEMI-RLKTAVLLAASLKIGARLGGASVEDADRLYDF 197

Query: 214 GENLGIIFQLADDLLDC 230
           G ++G+ FQL DDLLD 
Sbjct: 198 GMHIGVAFQLKDDLLDV 214


>gi|329848574|ref|ZP_08263602.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
           C19]
 gi|328843637|gb|EGF93206.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
           C19]
          Length = 339

 Score = 95.5 bits (236), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L  V +    ++ AA+E IH  +L+HDD+  +D+  +RRGK   H
Sbjct: 58  GGKRLRPLLCVAAARLCEVRNDNHHKLSAAVEFIHTATLLHDDV--VDSSSLRRGKVAAH 115

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +   ++++ G+ L   AFE++    +    +I S+    +T    LQ M    +   Q
Sbjct: 116 LIWGAPSSVLVGDFLFARAFELMVETGSLRALDILSKASAVITQGEVLQLMKAFDLNLSQ 175

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            ++I+      I   KT AL   A ESGA+ A AS+++   L  +G NLG+ FQ+ DD+L
Sbjct: 176 ADYIE------IISSKTAALFSAASESGAVAAGASEDKITALYSYGLNLGLAFQIQDDVL 229

Query: 229 DCEED 233
           D + D
Sbjct: 230 DYQGD 234


>gi|149183310|ref|ZP_01861750.1| HepT [Bacillus sp. SG-1]
 gi|148848968|gb|EDL63178.1| HepT [Bacillus sp. SG-1]
          Length = 320

 Score = 95.5 bits (236), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A   + N  +   V  A+E IH  SL+HDD+  +D+  +RRGKPT+ 
Sbjct: 43  GGKRIRPVFVLLSAKFGDYNINSIKNVAVALELIHSASLVHDDV--IDDADLRRGKPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+D  TA+  G+ +   + E ++    +    I S  ++ LT          G++  I+
Sbjct: 101 SQWDNKTAMYTGDYIFARSLEYMTKIDNEDAHKILSNAIVELT---------VGEIEQIK 151

Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  E  +  ++ + K KT  L+  +C+ GAI A A     ++L  FG N+G+ FQ+ D
Sbjct: 152 DKYRFEQDLKDYLRRIKRKTALLIAVSCQLGAIAAGAPPEIHKKLYRFGYNVGMSFQITD 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    EE+L K
Sbjct: 212 DILDFTASEEELGK 225


>gi|163745677|ref|ZP_02153037.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45]
 gi|161382495|gb|EDQ06904.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45]
          Length = 334

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A +        + + A +E IH  +L+H
Sbjct: 34  MASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYGGPYHVHLAATVEFIHTATLLH 93

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++ P +     I S    +
Sbjct: 94  DDV--VDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMTEPGSMPVMRILSNAAAT 151

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   Q+   DE     + + KT AL   A E G ++A AS ++ + 
Sbjct: 152 IAEGEVLQ------LTAAQNLATDEAVYLQVVRGKTAALFSAATEVGGVIAGASTDQVKA 205

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LGI FQ+ DDLLD + D
Sbjct: 206 LYDYGDALGIAFQIVDDLLDYQGD 229


>gi|302383413|ref|YP_003819236.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194041|gb|ADL01613.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 346

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 92/186 (49%), Gaps = 13/186 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK++R  L    A     +        AL++ A++E IH  +L+HDD+  +D    RRG
Sbjct: 60  GGKRLRPLLTIAAARSATADRPDADLTAALKLAASVEFIHTATLLHDDV--VDGSERRRG 117

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           K   H+ +   T+++ G+ L   AFE++        D IR+  +L+   ++  QG +  Q
Sbjct: 118 KVAAHLIWGSATSVLVGDFLFARAFELMVE-----TDQIRALGILAQASSVIAQGEVL-Q 171

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +    D  +D+     I   KT  L   A ESGA+   A       LR +G NLG+ FQL
Sbjct: 172 LTRAHDLNLDQETYLRIISAKTAELFAAAAESGAVGVGADPKTTSALRSYGLNLGLAFQL 231

Query: 224 ADDLLD 229
           ADD LD
Sbjct: 232 ADDALD 237


>gi|269792514|ref|YP_003317418.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100149|gb|ACZ19136.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 305

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 11/221 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
           + +++ L +  S    +   RL SA+ Y+L  GGK++R  L    A  F +     + + 
Sbjct: 19  SWVEEALERLCSSRPKRVPSRLWSAMVYSLTAGGKRLRPVLCLMAAEAFGLEGQRVMPLA 78

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A E IH  SLIHDDLP MD+  +RRGKPT H+ + E  A++AG+ LL  AFE  S+ + 
Sbjct: 79  LAFEMIHTASLIHDDLPCMDDDDLRRGKPTNHVVFGEAMALLAGDALLALAFE--SAIEG 136

Query: 137 QLKDNIRSQLM----LSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGAL 188
            + ++   +L+    +SL    G  G+ GGQ +D+  E + +     +V  + + KTG L
Sbjct: 137 LMANHFSGELISLAVMSLAKATGPSGICGGQSMDMGFEDMGQLGPDRRVMEVARSKTGVL 196

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  + E GAIMA A ++    +R +G  LG  FQ+ADD+LD
Sbjct: 197 IASSLEGGAIMAGADEDALSNVRGYGMALGKAFQVADDILD 237


>gi|88704338|ref|ZP_01102052.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71]
 gi|88701389|gb|EAQ98494.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71]
          Length = 320

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVT-ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  LV    A+L +++ L  +R  A +E IH  +L+HDD+  +D   +RRG+PT 
Sbjct: 41  GGKRLRPVLVLLSSAALGSISELQ-IRFAAVVEFIHTATLLHDDV--VDVSELRRGRPTA 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +   ++++ G+ L T AF+++ +    L ++   ++M   T+ I    +L  Q++  
Sbjct: 98  NSAFGNASSVLVGDFLYTRAFQLMVT----LGNHDVLKMMADTTNTIAAGEVL--QLIRA 151

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E Q + +   KT AL    C+  A++A A       L  +G N+GI FQ+ DDL
Sbjct: 152 GDSSTSEDQYYDVIDRKTAALFAAGCQGAALLAGADSGNVRDLNIYGRNVGIAFQIVDDL 211

Query: 228 LDCEED 233
           LD + D
Sbjct: 212 LDYQGD 217


>gi|320540162|ref|ZP_08039817.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str.
           Tucson]
 gi|320029828|gb|EFW11852.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str.
           Tucson]
          Length = 333

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 115/211 (54%), Gaps = 11/211 (5%)

Query: 22  DLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           D++   A+ ++  H+D  L++ + Y ++  GGK+IR  +    A   N      + V A 
Sbjct: 23  DMMAVNAAILEQLHSDVTLINQLCYYIISGGGKRIRPMIAVLAARALNYEGNKHVTVAAL 82

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T AF++++S K+  
Sbjct: 83  IEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLKS-- 138

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              +R   ++S   N+  +G +  Q++++ D  I E     +   KT  L   A +S AI
Sbjct: 139 ---LRVLALMSEAVNVIAEGEVL-QLMNVHDPDITEESYMQVIYSKTARLFEAAAQSSAI 194

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++ A+Q E++ L+ +G  LG  FQL DDLLD
Sbjct: 195 LSGANQAEEKALQDYGRYLGTAFQLIDDLLD 225


>gi|150026434|ref|YP_001297260.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772975|emb|CAL44459.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
          Length = 324

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 12/202 (5%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T+    L + I Y L LGGK++R  L      +F+V+   +L    AIE  H +SL+HDD
Sbjct: 21  TKEPKNLYNPIDYILSLGGKRMRPILTLMATEVFDVDCKKSLAAATAIEIFHNFSLVHDD 80

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MD+  +RRG  TVH +++  T I++G+ +L  A++     + ++  +     +  L 
Sbjct: 81  I--MDDAPLRRGNETVHEKWNINTGILSGDAMLILAYQHFEEYEPKIFRD-----LAKLF 133

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208
               L+ +  GQ  D+  E  D+  +    KM   KT  L+  A + GAI+A  S     
Sbjct: 134 SKTALE-VCEGQQYDVDFETRDDVIIAEYLKMIEYKTAVLVGAAMKMGAIVAQTSTENAN 192

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
            +  FG NLGI FQL DD LD 
Sbjct: 193 LIYDFGLNLGIAFQLQDDYLDA 214


>gi|307704839|ref|ZP_07641733.1| farnesyl diphosphate synthase [Streptococcus mitis SK597]
 gi|307621615|gb|EFO00658.1| farnesyl diphosphate synthase [Streptococcus mitis SK597]
          Length = 291

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 12/227 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K QE    ++  L+D       +   Q    L  ++ Y++  GGK+IR FL+        
Sbjct: 2   KKQEKLALVELALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLGVLEALQ 55

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           V    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  VAIKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
             + +I+  +  L   I+  L+ +L+   G  GM+ GQ+LD++ E  ++   ++  I   
Sbjct: 116 DPYALIA--QADLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQYLSLEELQTIHAN 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTG L+ +  ++ AI+A  +   + +L+  G  +G+ FQ+ DD+LD 
Sbjct: 174 KTGKLLAYPFQAAAIIAELAPEIQAKLKTVGALIGLAFQVRDDVLDV 220


>gi|324990647|gb|EGC22583.1| geranyltranstransferase [Streptococcus sanguinis SK353]
          Length = 291

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++  A Q+ +++LR  G+ LG+ FQ+ D
Sbjct: 156 QGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLIVQAQQSVQDKLRRIGDLLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|297620258|ref|YP_003708395.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044]
 gi|297375559|gb|ADI37389.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044]
          Length = 315

 Score = 95.1 bits (235), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 18/210 (8%)

Query: 42  AIRYAL-LGGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           A  YAL  GGK++R   + +V +         L+AL    +IE  H  SL+ DD+PSMDN
Sbjct: 60  ACAYALSTGGKRVRPSITLMVADALGGMGDVTLSAL----SIEYFHTASLVVDDMPSMDN 115

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD---------NIRSQLML 148
              RR +P+VH ++ E  A++   GL+   + +I+     L D         ++R +L L
Sbjct: 116 DDERRSQPSVHKKFGEAAALLVSYGLIGAGYGMIAENGRLLLDQNIFFADSVDLRCRLAL 175

Query: 149 -SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            + + N GL G  GGQ LDI+   +    +  I  MKT +L   A  +G +    +  + 
Sbjct: 176 ENASFNTGLNGATGGQFLDIRPPDLSTETLKKIIHMKTSSLFEVAFVNGWLFGGGALEKL 235

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           ++++    + G+ FQ+ADDL D E+DL  K
Sbjct: 236 DQVKQAAAHFGLAFQIADDLGDMEQDLRNK 265


>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
 gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
          Length = 328

 Score = 95.1 bits (235), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 7/197 (3%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +L  A+RYAL  G+ + + +      L   +   A+    A+E I   + + DDLPS+DN
Sbjct: 63  QLHEAMRYALSQGRLMCAIVCIAACELVGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDN 122

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R GKPTVH  +   TA+ AG  LL   FE +++     + +  ++++  ++  +G  
Sbjct: 123 AELRDGKPTVHCAFGIPTALFAGTALLVLGFEHLAA---HYRGDTAARMVGEVSRAVGST 179

Query: 158 GMLGGQMLD--IQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           G+L GQ +D  IQ+    ++   +  +   KT AL+  +   GAI   AS  + E LR +
Sbjct: 180 GLLAGQAVDMGIQNAGRAVELETLEFVHLHKTSALLEASLVIGAIAGGASDQDIEALRAY 239

Query: 214 GENLGIIFQLADDLLDC 230
           G   G+++Q+ DD+ D 
Sbjct: 240 GRVTGLLYQIVDDIADA 256


>gi|171463010|ref|YP_001797123.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192548|gb|ACB43509.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 334

 Score = 95.1 bits (235), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 10/183 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  L+   A        T   L + A +E IH  +L+HDD+  +D   +RRG+ T
Sbjct: 50  GGKRVRPALLMLVAKALANGKQTPHILEMSAVVEFIHTATLLHDDV--VDESTLRRGRKT 107

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +    +++ G+ L + AF+++  P     +++R   +LS   N   +G +  Q+L+
Sbjct: 108 ANAAFGNAASVLVGDFLYSRAFQMMVDP-----NDLRVMQILSDATNTIAEGEVL-QLLN 161

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + D  +DE     + + KT  L   + E GAI+A+A+  ++E+   FG ++G  FQL DD
Sbjct: 162 MNDPEVDEESYLQVIRYKTAKLFEASTELGAILANATNAQREQAAAFGRHIGTAFQLMDD 221

Query: 227 LLD 229
           LLD
Sbjct: 222 LLD 224


>gi|229495533|ref|ZP_04389266.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229317516|gb|EEN83416.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 334

 Score = 95.1 bits (235), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 16/231 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
           + +Q+N   I+T L  L+    +H +TQ ++ L + + YA  GG K++R  LV   A ++
Sbjct: 7   TTIQDNLSYIETELQTLV----AHCRTQISEPLYAPMAYAFEGGGKRVRPLLVLMVADMY 62

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +    ++   A+E  H ++L+HDD+  MD+  +RR +P+V  Q+    AI+ G+ +L+
Sbjct: 63  GKDRADFIKAALALEIYHNFTLLHDDV--MDHSEMRRNRPSVPAQFGIAQAILTGDAMLS 120

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-- 183
            A+++       L+  I          N   Q ++ GQ +D+  E   +  +   ++M  
Sbjct: 121 LAYKLTQEYPLALQPAIMG------VFNRMSQDIMVGQQMDMDFETRSDVTLAEYERMIR 174

Query: 184 -KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT  L+  A E GA +A     ++  L   G N G+ FQL DD LD   D
Sbjct: 175 KKTAVLLSAALEIGAYIADTGMRDRSYLIRAGINAGMAFQLRDDYLDVYGD 225


>gi|324995302|gb|EGC27214.1| geranyltranstransferase [Streptococcus sanguinis SK678]
 gi|332366064|gb|EGJ43820.1| geranyltranstransferase [Streptococcus sanguinis SK1059]
          Length = 291

 Score = 95.1 bits (235), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V +A+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++A   Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLIAGVEQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|255262881|ref|ZP_05342223.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62]
 gi|255105216|gb|EET47890.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62]
          Length = 295

 Score = 95.1 bits (235), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 107/224 (47%), Gaps = 14/224 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           + RI+T +   +   A         +L SA+ YA+  GG +IR  ++   AS    +   
Sbjct: 4   TARIETAIQSAI---AGGQTAPSPGKLASALHYAVTPGGARIRPTILLSVASACGDDMPK 60

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A    AA+E IHC SL+HDDLP  D+   RRGKP VH  + E  A++ G+ L+  AF +
Sbjct: 61  LADAAAAALELIHCASLVHDDLPCFDDADTRRGKPAVHRAFGEPLAVLTGDSLIVMAFTV 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++     L      +LM  L    G+  G+  GQ  + +D+      +    + KTGAL 
Sbjct: 121 LTQ-SAHLHPTRAIELMKVLAERTGMPNGICAGQGWESEDQI----DLSAYHRAKTGALF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + GAI A       + L   G  +G  FQ+ADDL D   D
Sbjct: 176 IAATQMGAIAAGQDGAPWDEL---GARIGEAFQVADDLRDALYD 216


>gi|240139478|ref|YP_002963953.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
           AM1]
 gi|240009450|gb|ACS40676.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
           AM1]
          Length = 288

 Score = 95.1 bits (235), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 112/219 (51%), Gaps = 14/219 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70
           +RI+T+LD+ +    SH +      LL+ AIRYA+  GG +IR  L    A +  + +  
Sbjct: 5   RRIETVLDNAV----SHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T+    AAIE +HC SL+HDDLP  D+  +RR KP+VH  +    A++ G+ L+  AFE 
Sbjct: 61  TSEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++   T+    +   + L         G++ GQ  +  + ++D  +    Q+ KTGAL  
Sbjct: 121 LARGVTRSPTRLAGLVGLIARAAGSPAGIVAGQAWE-SEPYVDLVE---YQQAKTGALF- 175

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               +    A A+       R  GE LG  +Q+ADDL D
Sbjct: 176 --AAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRD 212


>gi|89052978|ref|YP_508429.1| trans-hexaprenyltranstransferase [Jannaschia sp. CCS1]
 gi|88862527|gb|ABD53404.1| Trans-hexaprenyltranstransferase [Jannaschia sp. CCS1]
          Length = 335

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 9/203 (4%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + M ++H  R+     + +  GGK+IR  L   CA L   +    +++ A +E IH  +L
Sbjct: 31  ARMASKHAPRIPEVTAHLVEAGGKRIRPMLTLACARLCGYSGDDHVKLAATVEFIHTATL 90

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D    RRG+PT ++ +D  ++++ G+ L   AF+++  P      +I S   
Sbjct: 91  LHDDV--VDESEQRRGRPTANLLWDNQSSVLVGDYLFARAFQLMVEPGNLRVLDILSNAA 148

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            ++     LQ  +   +     E  +ET + +I + KT AL   ACE G ++A       
Sbjct: 149 ATIAEGEVLQLTVASNI-----ETPEETYLQVI-RGKTAALFEAACEVGGVIAGRDTFII 202

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           + L  +G+ LG+ FQ+ADDLLD 
Sbjct: 203 QALATYGDGLGVAFQMADDLLDW 225


>gi|163760432|ref|ZP_02167514.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
 gi|162282383|gb|EDQ32672.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
          Length = 289

 Score = 94.7 bits (234), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 16/220 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLL-SAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           KRID  L+    Q  +      N  ++  A+RY++  GG +IR  L    A        +
Sbjct: 5   KRIDRNLE----QAITFATAGGNPSIICDALRYSVFPGGARIRPRLCLAVALAEGDEAPS 60

Query: 72  ALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           A    A AIE +HC SL+HDDLP  D+   RRGKP+VH  + E TA++AG+ L+  AFE 
Sbjct: 61  ASNAAATAIELLHCASLVHDDLPCFDDAATRRGKPSVHTAFGETTAVLAGDALIVLAFET 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I+       D I + L+  +   +G+  G++ GQ  +  ++ ID   + +  + KT +L 
Sbjct: 121 IARECLATPDRI-APLIGVIGRAVGMPHGIIAGQAWE-SEKSID---LKVYHRAKTSSLF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +  +GAI A A      RL   GE LG  FQ+ADDL D
Sbjct: 176 IGSTTAGAIAAGADPQNWYRL---GEALGDAFQVADDLRD 212


>gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa]
 gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa]
          Length = 258

 Score = 94.7 bits (234), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 7/180 (3%)

Query: 34  QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           Q+ D++  A+RY++L  G K+    +      LF  N L A     A+E +H  SLIHDD
Sbjct: 76  QYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVHAASLIHDD 135

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIR-SQLMLS 149
           LP MD+   RRG+P+ H  Y    AI+AG+ L    F  I+S   + L    R  +++  
Sbjct: 136 LPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFSHIVSQTPSDLVPEPRLLRVIAE 195

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +   +G +GM  GQ LD++        V  +Q+ K G +   +   G ++A A+ +E  R
Sbjct: 196 IARAVGSRGMAAGQFLDLEG---GPNAVEFVQEKKYGEMGECSAVCGGLLAGATDDEIRR 252


>gi|51473666|ref|YP_067423.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
 gi|51459978|gb|AAU03941.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
          Length = 327

 Score = 94.7 bits (234), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 122/227 (53%), Gaps = 20/227 (8%)

Query: 8   KLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           K+Q++ K   T L+DL+   L++ + +  +    LL A      GGK+IR  L    A +
Sbjct: 6   KIQQDLKEEVTQLNDLIISCLKSDTELIEKVGKYLLEA------GGKRIRPLLTIITAKM 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F+      +++ +A+E IH  +L+HDD+  +D+  +RR KPTV++ +   T+I+ G+ L 
Sbjct: 60  FDYKGDNHIKLASAVEFIHAATLLHDDV--VDDSTLRRFKPTVNVIWGSKTSILVGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           + +F+++ +       N+  R+ +++S    + L  +   +++ I     DE Q   I K
Sbjct: 118 SQSFKLMIASGCIKAMNVLARASVIISEGEVVQLVKLNERRIITI-----DEYQ--QIVK 170

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   ACE GAI+A       E ++ FG  LG IFQ+ DDLLD
Sbjct: 171 SKTAELFGAACEVGAIIAEQVDRVSEDVQDFGMLLGTIFQVIDDLLD 217


>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
          Length = 268

 Score = 94.7 bits (234), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 22/195 (11%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A+RY+LL GGK++R  L      L       A+    A+E IH  SLIHDD+    
Sbjct: 39  KIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPAACAVEMIHTMSLIHDDV---- 94

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIG 155
                         Y E  A++AG+ LL++AFE ++S  +      R  + +  L   IG
Sbjct: 95  --------------YGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIG 140

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            +G++ GQ++DI +  ++  +   I   KT AL+  +   G I+   S  E ERLR F  
Sbjct: 141 TEGLVAGQVVDISNVGLEHLK--FIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFAR 198

Query: 216 NLGIIFQLADDLLDC 230
            +G++FQ+ DD+LD 
Sbjct: 199 CIGLLFQVVDDILDV 213


>gi|182415631|ref|YP_001820697.1| polyprenyl synthetase [Opitutus terrae PB90-1]
 gi|177842845|gb|ACB77097.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
          Length = 325

 Score = 94.7 bits (234), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 120/237 (50%), Gaps = 48/237 (20%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNH--------------------LTALRV 75
           RL  A+RY+L  GGK++R  L+   A L     H                    +TAL +
Sbjct: 31  RLHEAMRYSLQAGGKRLRPVLLLASAELCGGSGHSPSLQQSATPEPPAGRRGDLVTALAL 90

Query: 76  GAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            AA  IEC+H YSLIHDDLP MD+  +RRG+PT H  +DE TA++AG+ LLT+AF +   
Sbjct: 91  PAAVAIECLHTYSLIHDDLPCMDDDDLRRGRPTAHKAFDEATALLAGDALLTHAFAL--- 147

Query: 134 PKTQLKDNIRSQLMLS------LTHNIGLQGMLGGQMLD-IQDEFIDET--QVFMIQKMK 184
               L +N  SQ  L+      L    G + ++GGQM D + ++  D T  ++  I   K
Sbjct: 148 ----LAENYASQPALAMALIRELADAAGSRRLIGGQMEDLLAEKKADATAEELEFIHLNK 203

Query: 185 TGALMCFACESGAIMAHASQN--------EKERLRCFGENLGIIFQLADDLLDCEED 233
           T A++  +   G  +   +Q         E   LR  G +LG+ FQ+ DD+LD   D
Sbjct: 204 TAAMIEASLVMGGWIGLHAQTAAPGALPPEITALRAAGRHLGLAFQIIDDVLDATAD 260


>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
 gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
 gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 366

 Score = 94.7 bits (234), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 115/205 (56%), Gaps = 16/205 (7%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYALL GGK++R  L     ++       A+   AA+E +H  SL+HDDLP MD+
Sbjct: 94  LHEAMRYALLAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDD 153

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLS---L 150
             +RRGKPT H+ Y E  A++ G+ LL+ +F  +    S P     D   ++++ +   L
Sbjct: 154 DDLRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGEL 213

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQ 204
              IG +G++ GQ++D+  E    T+   ++++      KT AL+  +   GAI+   S 
Sbjct: 214 ARCIGSEGLVAGQVVDL--EMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSD 271

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
            + E LR +  ++G++FQ+ DD+LD
Sbjct: 272 EQIESLRMYARSIGLLFQVVDDILD 296


>gi|325694101|gb|EGD36019.1| geranyltranstransferase [Streptococcus sanguinis SK150]
          Length = 291

 Score = 94.7 bits (234), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+      F +    A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLGLIQAFGLELTEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++A   Q+ +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQVIRLEDLKTIHANKTGKLLTYPFVAAGLIAEVEQSVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|319892460|ref|YP_004149335.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162156|gb|ADV05699.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464437|gb|ADX76590.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           pseudintermedius ED99]
          Length = 318

 Score = 94.7 bits (234), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 22/225 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNV 67
           L +  K+I+  L  L+    S +Q+   D LLS+      GGK++R   V   + +  N 
Sbjct: 6   LNQEIKKIENTLKQLIQSEDSTLQSA-ADHLLSS------GGKRVRPLFVILSSYVGENP 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +  A RV  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL  A
Sbjct: 59  ANDAAYRVATALELIHMATLVHDDV--IDFSDKRRGKLTIEKKWDQPTAILTGNFLLARA 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMK 184
            E +S     ++D   S++  +L+H I    +  G++   QD+F  E   T        K
Sbjct: 117 LEHLSY----IQD---SRIHQTLSHAII--EVCRGELFQFQDQFRAEQSITNYLRRINRK 167

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T  LM  A E GA+ +H       ++R  G ++G+ FQ+ DD+LD
Sbjct: 168 TALLMQLATEVGAMSSHTDDPTIRKMRDIGHHIGMSFQIVDDVLD 212


>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
          Length = 338

 Score = 94.7 bits (234), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 5/197 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  A+RY LL GGK++R  +      L   +  T +    A E IH  S++ DDLP MD
Sbjct: 72  KLHEAMRYTLLSGGKRVRPIVCIAACELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMD 131

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGK + H  Y E   ++A   L   A + + +    +      + +  +    G 
Sbjct: 132 NDDFRRGKLSNHRVYGEKITLLAVRSLQALAVDHVVTATRGVPPERLVRALTEMAILTGS 191

Query: 157 QGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           +G   GQ+ D+    +D  +   Q+  I   KTG L   +  SGAI+  AS+ E E+LR 
Sbjct: 192 KGAAAGQIADLCSSGEDFNVSIEQLEHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRK 251

Query: 213 FGENLGIIFQLADDLLD 229
           F + +G++FQ+ DD+LD
Sbjct: 252 FSKCIGLMFQIVDDVLD 268


>gi|284040578|ref|YP_003390508.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74]
 gi|283819871|gb|ADB41709.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74]
          Length = 323

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 116/225 (51%), Gaps = 15/225 (6%)

Query: 18  TILDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
            I  D L Q    +Q  Q+   L + IRY + LGGK++R  L    A LF  +   A+R 
Sbjct: 4   AIFIDALQQELQSIQYGQNPPELYNPIRYIMSLGGKRMRPLLTLMGAYLFTDDWRKAVRP 63

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E  H ++L+HDD+  MD   +RRG+PTVH +++   AI++G+ +L  A++++ + +
Sbjct: 64  ALGVEVFHNFTLMHDDI--MDQAPLRRGQPTVHEKWNGNIAILSGDVMLVNAYQLMLNVE 121

Query: 136 TQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
                    +L ++L   +     +  GQ +D+  E    + E +   + ++KT  L+ +
Sbjct: 122 A-------DKLAVALARFSRTAAEVCEGQQMDMNFETRWDVSEAEYIDMIRLKTSVLLGY 174

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + E G ++  A +     L   G N+G+ FQL DDLLD   D  K
Sbjct: 175 SLELGGLIGGADEETNLHLYEGGMNIGVGFQLKDDLLDVYGDPAK 219


>gi|149923736|ref|ZP_01912130.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica
           SIR-1]
 gi|149815420|gb|EDM74960.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica
           SIR-1]
          Length = 262

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 18/160 (11%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS- 133
           V AA+E +HC SL+HDDLP  D+  +RRG+P+VH  + E  A++AG+GL+  A+E+I+  
Sbjct: 19  VAAAMELMHCASLVHDDLPCFDDAPLRRGRPSVHAAFGEELAVLAGDGLIILAYEVIAET 78

Query: 134 --PKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
             P + +   IR  S+ + +    +  Q     + + +Q             + KTGAL 
Sbjct: 79  NLPPSAVPKLIRCISRGVGAGGGLVAGQAWESERSVGLQ----------TYHQAKTGALF 128

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                +GAI+A A Q    +   FG +LG  +Q+ADDL D
Sbjct: 129 EAGARAGAILAGAPQEPWAK---FGAHLGEAYQVADDLRD 165


>gi|254512243|ref|ZP_05124310.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
           KLH11]
 gi|221535954|gb|EEE38942.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
           KLH11]
          Length = 332

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 9/206 (4%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + M + H  R+     + +  GGK++R  L    A LF+ +    +R+ A +E IH  +L
Sbjct: 30  TRMASDHAPRIPEVTAHLVEAGGKRLRPMLTLAAAQLFDYSGDHHIRLAATVEFIHTATL 89

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D    RRG+PT ++ +D  ++++ G+ L + +F+++    +    +I +   
Sbjct: 90  LHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANAS 147

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            ++     LQ M     LD       E     + + KT AL   A E G ++A AS  + 
Sbjct: 148 ATIAEGEVLQ-MTAATDLDTS-----EAIYLQVVRGKTAALFSAATEVGGVIAGASDEQV 201

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +G+ LGI FQ+ADDLLD + D
Sbjct: 202 RALYDYGDALGIAFQIADDLLDYQGD 227


>gi|62959183|gb|AAY23699.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-24]
          Length = 144

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 7/136 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PT H  + E  AI+AG+GLLT++F++++  +  L D  + +L+  L    G +GM
Sbjct: 12  LRRGNPTNHKVFGEAMAILAGDGLLTFSFQLLAEDE-HLPDEKKVELIALLARCAGPEGM 70

Query: 160 LGGQMLDIQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           +GGQ+ DI+ E     ++E Q   ++  KTG L+ F+  +GAIM+ AS  E   L  F  
Sbjct: 71  VGGQVADIEGENGELTVEELQSIHVR--KTGKLLMFSVMAGAIMSDASPGELASLEEFAY 128

Query: 216 NLGIIFQLADDLLDCE 231
           ++G+ FQ+ DD+LD E
Sbjct: 129 HVGLAFQIQDDILDVE 144


>gi|159046054|ref|YP_001534848.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL
           12]
 gi|157913814|gb|ABV95247.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL
           12]
          Length = 292

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 116/233 (49%), Gaps = 25/233 (10%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLT 71
           RI+T LD  L+++ +        +L SA+ YA+  GG +IR  +    A     +   LT
Sbjct: 6   RIETALDIALIRSRAG---SCPPKLASALEYAVKPGGARIRPTICLNVARACGDDAPGLT 62

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                AAIE IHC SL+HDDLP+ DN  +RRGKPTVH  + E  A++ G+ L+  AFE I
Sbjct: 63  DAAC-AAIELIHCGSLVHDDLPAFDNADVRRGKPTVHKAWSEPLAVLTGDTLIIMAFEQI 121

Query: 132 SSPKTQLKDNIRSQ-LMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFM--IQKMKTGA 187
           +       D +R+  L L L    G+  G+  GQ  +       E QV +    + KTGA
Sbjct: 122 A--LAARSDALRAATLTLELARYSGMPHGICAGQAWE------SEAQVDLSAYHRAKTGA 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           L      +  + A A+  + E     G  +G  FQ+ADDL D    EE L K 
Sbjct: 174 LFTA---ATRMGAAAAGADPEAWTELGARIGEAFQVADDLRDALYDEETLGKP 223


>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
          Length = 366

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 115/205 (56%), Gaps = 16/205 (7%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYALL GGK++R  L     ++       A+   AA+E +H  SL+HDDLP MD+
Sbjct: 94  LHEAMRYALLAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDD 153

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLS---L 150
             +RRGKPT H+ Y E  A++ G+ LL+ +F  +    S P     D   ++++ +   L
Sbjct: 154 DDLRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGEL 213

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQ 204
              IG +G++ GQ++D+  E    T+   ++++      KT AL+  +   GAI+   S 
Sbjct: 214 ARCIGSEGLVAGQVVDL--EMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSD 271

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
            + E LR +  ++G++FQ+ DD+LD
Sbjct: 272 EQIESLRMYARSIGLLFQVVDDILD 296


>gi|157825829|ref|YP_001493549.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford]
 gi|157799787|gb|ABV75041.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford]
          Length = 327

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 123/226 (54%), Gaps = 18/226 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           K+Q++ K   T L+DL++        + ++ L+  +   LL  GGK+IR  L    A +F
Sbjct: 6   KIQQDLKDEVTKLNDLIISCL-----KSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 61  DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118

Query: 126 YAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            +F+++ +  +    N+  ++  ++S+   I L  +   +++ I+       + + I K 
Sbjct: 119 QSFKLMVASGSIKAMNVLAKASAIISVGEVIQLVKLNERRIITIE-------EYYQIVKS 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT  L   +CE GAI+A    +  + +R FG  LG IFQ+ DDLLD
Sbjct: 172 KTAELFGASCEVGAIIAEQVDHISKDIRYFGTLLGTIFQVIDDLLD 217


>gi|313159079|gb|EFR58454.1| putative geranyltranstransferase [Alistipes sp. HGB5]
          Length = 324

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 16/203 (7%)

Query: 37  DRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL + I Y+L GG K++R  L+     +F      AL   AA+E  H ++L+HDD+  M
Sbjct: 26  ERLYAPIGYSLAGGGKRLRPMLLMLAHGIFTDRFQAALPAAAAVEVFHNFTLLHDDI--M 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRGKP+V+ ++    AI++G+ ++  A+ ++S    +L   I     L   + + 
Sbjct: 84  DNAAVRRGKPSVYAKWGPSVAILSGDAMMICAYRLLSEVPAELLPRI-----LGTFNTMA 138

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERL 210
           L+ +  GQ  D+  +F  + +V +++ M     KT  L+  +   GA++  AS+ +  +L
Sbjct: 139 LE-VCEGQQYDM--DFESKRKVSVVEYMHMIELKTSVLLAGSITIGAMLGGASEEDCRKL 195

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           R F   LG+ FQL DDLLD   D
Sbjct: 196 RRFAIELGLAFQLQDDLLDSYGD 218


>gi|28493021|ref|NP_787182.1| heptaprenyl diphosphate synthase component II [Tropheryma whipplei
           str. Twist]
 gi|28476061|gb|AAO44151.1| probable heptaprenyl diphosphate synthase component II [Tropheryma
           whipplei str. Twist]
          Length = 338

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 24/214 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++DLLL+T        +  L+S       GGK+ R  LV   + + +  +   +R  A I
Sbjct: 29  VEDLLLETVGDCHEIVSHLLVS-------GGKRARPLLVLLTSCMGSGINDAVIRAAAGI 81

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL HDD+  MDN YIR G  T H  + +  AI+AG+ L   A          L 
Sbjct: 82  ELIHLGSLYHDDV--MDNAYIRHGSITAHRLWGKSAAILAGDFLFAKA--------GVLG 131

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFM-IQKMKTGALMCFACES 195
            N+  + +   T     Q M+ GQ+   L I D  +D  + ++ + + KTG+L+  + + 
Sbjct: 132 LNLDKRAIAVQTE--AFQRMISGQLSETLGISDS-LDPLEAYIEVSRGKTGSLIAASAQV 188

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GAI+  AS +  E LR FGE++G+ FQL DD++D
Sbjct: 189 GAILGDASPSTLEPLRDFGESIGVAFQLVDDVID 222


>gi|146284189|ref|YP_001174342.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri
           A1501]
 gi|145572394|gb|ABP81500.1| Geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri
           A1501]
          Length = 296

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D +  A+R   L  GK++R  L+       + +    L    A+E IH  SL  DD+P M
Sbjct: 39  DTVTQALREGTLAPGKRLRPLLLLLALGDLDADPAIGLDPACALEMIHAASLFLDDMPCM 98

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+PT+H+++ E  A++A   LL++A+ I +   + L    R+  +  L   +G
Sbjct: 99  DNASLRRGQPTIHLRFGEDVAVLASVALLSHAYGITAMAPS-LSPRQRNDAVALLARAVG 157

Query: 156 LQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            QG++ GQ  D+    Q + +D   V    ++KTG+L   A E  A++  A +     LR
Sbjct: 158 AQGLVRGQFRDLHGTGQSQQLDA--VIATNQLKTGSLFTAALELAALLVGADRALTAHLR 215

Query: 212 CFGENLGIIFQLADDLLD 229
            F   LG+ FQL DD+ D
Sbjct: 216 GFASELGMAFQLLDDIAD 233


>gi|312137122|ref|YP_004004459.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Methanothermus fervidus DSM 2088]
 gi|311224841|gb|ADP77697.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Methanothermus fervidus DSM 2088]
          Length = 322

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV             AL    AIE IH +SLIHDD+  MD   +RRG+ TVH
Sbjct: 38  GGKRIRPSLVLLSTESVGGKIEDALNAATAIELIHTFSLIHDDI--MDKDEVRRGRATVH 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQMLD 166
           + + E  AI+AG+ L + AFE++      LK NI  + ++ +          +  GQ  D
Sbjct: 96  VIWGEPLAILAGDVLFSKAFEVM------LKSNIDEKRLVKVLDVMTKACVNLCKGQAYD 149

Query: 167 I--QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +  +  F + E +   +   KT +L+  + + GAI+ + S+ E   L  +G+ LG+ FQ+
Sbjct: 150 MLFEKNFEVKEKEYLEMIYYKTASLIAASTKIGAIIGNGSKEEINALYNYGKFLGLAFQI 209

Query: 224 ADDLLDCEED 233
            DD LD   D
Sbjct: 210 HDDYLDIAGD 219


>gi|237749261|ref|ZP_04579741.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13]
 gi|229380623|gb|EEO30714.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13]
          Length = 329

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A  F         + A IE IH  +L+HDD+  +D   +RRGK + +
Sbjct: 50  GGKRIRPALVLLMARAFGYQGTQHQMLAAMIEFIHTATLLHDDV--VDEADLRRGKSSAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF++I +      +++R   +LS   N+  +G +  Q+++++
Sbjct: 108 ALFGNAASVLVGDFLYTRAFQMIVAV-----NDMRILPVLSDATNLIAEGEVM-QLVNVR 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  IDE +   +   KT  L   +   GA++AHAS+ E E    +G +LGI FQL DDLL
Sbjct: 162 NPAIDEKRYMEVIYAKTARLFEVSAVLGALIAHASEKEIEAAAAYGRSLGIAFQLVDDLL 221

Query: 229 D 229
           D
Sbjct: 222 D 222


>gi|84500217|ref|ZP_00998483.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
 gi|84392151|gb|EAQ04419.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
          Length = 331

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 9/201 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK+IR  L    A L   +    + + A +E IH  +L+H
Sbjct: 31  MASRHAPRIPEVTAHLVEAGGKRIRPMLTLAAARLCGYDGPYHIHLAATVEFIHTATLLH 90

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   AF+++  P      N+R   +LS
Sbjct: 91  DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPG-----NLRVLSILS 143

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
                  +G +  Q+   QD    E     + + KT AL   A E+G  +A AS  +   
Sbjct: 144 DAAATIAEGEVL-QLSAAQDLKTTEETYLQVIRGKTAALFSAATEAGGEIAGASPAQVRA 202

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L  +G+ LGI FQ+ADDLLD 
Sbjct: 203 LFDYGDALGIAFQMADDLLDW 223


>gi|327193306|gb|EGE60211.1| farnesyltranstransferase protein [Rhizobium etli CNPAF512]
          Length = 309

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  + E  A++ G+ L+  AF+ +
Sbjct: 72  ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 131

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           S  +  L   + ++++  +   +G   G++ GQ +    E +    +      KTG+L  
Sbjct: 132 SL-QAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFV 186

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A   GA+ + A      ++   GE LG  +Q+ADD+ D
Sbjct: 187 AAATCGALASGADPAPWSKV---GELLGHAYQIADDIAD 222


>gi|319778271|ref|YP_004129184.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
 gi|317108295|gb|ADU91041.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
          Length = 303

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 133/243 (54%), Gaps = 24/243 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQ----TQHN--DRLLSAIRYALLG-GKKIRSFLVTEC 61
           L   +   D+ L++++  +  H++    + H+   +LL  +RYA LG GK++R+ LV   
Sbjct: 3   LVSKTSHFDSWLEEVVKFSNRHLEEIFSSLHDVPPKLLEVMRYATLGPGKRLRAALVLAT 62

Query: 62  ASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
             +F      +      RV  +IE IH YSL+HDDLP MD+  +RRG+PT H++Y E  A
Sbjct: 63  YEVFQTTSPDSYDDYISRVVCSIELIHAYSLVHDDLPCMDDDDLRRGRPTCHVKYGEAMA 122

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQD--E 170
           ++A + L   ++E +      L  +I S+L++S T  +    G  GM+GGQ++DI +   
Sbjct: 123 LLAADALQPLSYEHL------LGSHIDSKLLVSSTKELLRATGATGMVGGQVIDILNISN 176

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +D   +  +   KTGAL+    E  +I+   S    E L+ + E +GI +Q+ DD+LD 
Sbjct: 177 HMDLEALKDMHSRKTGALIQACVEVVSILFKDSSLYYEELKRYSEYIGIAYQVVDDILDA 236

Query: 231 EED 233
            +D
Sbjct: 237 TQD 239


>gi|21492720|ref|NP_659794.1| farnesyltranstransferase protein [Rhizobium etli CFN 42]
 gi|218515967|ref|ZP_03512807.1| farnesyltranstransferase protein [Rhizobium etli 8C-3]
 gi|21467145|gb|AAM54808.1| farnesyltranstransferase protein [Rhizobium etli CFN 42]
          Length = 309

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  + E  A++ G+ L+  AF+ +
Sbjct: 72  ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 131

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           S  +  L   + ++++  +   +G   G++ GQ +    E +    +      KTG+L  
Sbjct: 132 SL-QAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFV 186

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A   GA+ + A      ++   GE LG  +Q+ADD+ D
Sbjct: 187 AAATCGALASGADPAPWSKV---GELLGHAYQIADDIAD 222


>gi|190894247|ref|YP_001984541.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652]
 gi|190699908|gb|ACE93991.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652]
          Length = 328

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  + E  A++ G+ L+  AF+ +
Sbjct: 91  ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 150

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           S  +  L   + ++++  +   +G   G++ GQ +    E +    +      KTG+L  
Sbjct: 151 SL-QAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFV 205

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A   GA+ + A      ++   GE LG  +Q+ADD+ D
Sbjct: 206 AAATCGALASGADPAPWSKV---GELLGHAYQIADDIAD 241


>gi|229918708|ref|YP_002887354.1| trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b]
 gi|229470137|gb|ACQ71909.1| Trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b]
          Length = 320

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A       +   +V +++E IH  SL+HDD+  +D+  +RRGKPTV 
Sbjct: 43  GGKRIRPAFVLLSAGFGETKDIRLTKVASSLELIHMASLVHDDV--IDDAMLRRGKPTVM 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +YDE  A+  GN L   A  ++S         I S  ++ +  +  ++ +  G++  IQ
Sbjct: 101 ERYDETVAMYTGNTLFGEAIRLVS--------EIDSPEVMRIMADT-MERICVGEINQIQ 151

Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++   ++    + ++  KT  L+  +C +GA+++ AS    ++L  FG ++G+ FQ+ D
Sbjct: 152 DQYEWGQSPKRYLDRIARKTALLIETSCAAGAVISGASPQTVKQLSLFGYDIGMAFQMTD 211

Query: 226 DLLD 229
           DLLD
Sbjct: 212 DLLD 215


>gi|218677523|ref|ZP_03525420.1| farnesyltranstransferase protein [Rhizobium etli CIAT 894]
          Length = 195

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  + E  A++ G+ L+  AF+ +
Sbjct: 21  ATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYL 80

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           S  +  L   + ++++  +   +G   G++ GQ +    E +    +      KTG+L  
Sbjct: 81  SL-QAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFV 135

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A   GA+ + A      ++   GE LG  +Q+ADD+ D
Sbjct: 136 AAATCGALASGADPAPWSKV---GELLGHAYQIADDIAD 171


>gi|281424797|ref|ZP_06255710.1| octylprenyl diphosphate synthase [Prevotella oris F0302]
 gi|281401167|gb|EFB31998.1| octylprenyl diphosphate synthase [Prevotella oris F0302]
          Length = 325

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 10/197 (5%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H++ LLS +   +   GGK++R  L+   A  F             +E +H  SL+HDD+
Sbjct: 28  HDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFGRVSSVTQHAAVGLELLHTASLVHDDV 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG+ +V+  YD   +++ G+ +L+ A   +S   +++     S+L  +L+ 
Sbjct: 88  --VDESSERRGQASVNALYDNKVSVLVGDFILSTALLYVSKTHSEVIVRYLSELGRTLSD 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              LQ      + +IQ+E I ET  + I K KT AL       GA  A AS ++ E  R 
Sbjct: 146 GEILQ------LTNIQNEAITETAYYEIIKRKTAALFEACAAIGAESAGASHDDVEAARK 199

Query: 213 FGENLGIIFQLADDLLD 229
           FG+NLGIIFQ+ DD+ D
Sbjct: 200 FGQNLGIIFQIRDDIFD 216


>gi|332977217|gb|EGK14013.1| heptaprenyl diphosphate synthase [Desmospora sp. 8437]
          Length = 323

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 18/208 (8%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLI 88
           ++T H D   SA      GGK++R   V        ++V+ L   +V   +E IH  +L+
Sbjct: 25  IRTDHRDLNRSAAHLLEAGGKRMRPVFVLLSGKFGEYDVDKLK--QVAVPLELIHMATLV 82

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D+   RRG+PTV  ++D   A+  G+ +L  +  I+S    Q++D    +++ 
Sbjct: 83  HDDV--IDDASTRRGRPTVKAKWDNRVAMYTGDYILGRSLAIVS----QIEDPKIHRVLS 136

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ---KMKTGALMCFACESGAIMAHASQN 205
              +      M  G++  I+D F  +  +       K KT  LM  +CE GA+++ A+  
Sbjct: 137 PAIYQ-----MCRGEIEQIRDFFATDPSLIRYLHRIKRKTALLMSVSCELGALVSGAAPA 191

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
           E  RLR FG  +G+ FQ+ DD+LD   D
Sbjct: 192 EVRRLRLFGYFVGMAFQITDDILDLTGD 219


>gi|326505838|dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326514464|dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 342

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 13/209 (6%)

Query: 31  MQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           M  +  + + +A+R+A+L G       K+    L      L       AL   AA+E +H
Sbjct: 61  MPIRPPESIHNAMRHAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPTAAALEMLH 120

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+  + S +T   D + 
Sbjct: 121 GASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIS-RTPSPDPVS 179

Query: 144 SQLML----SLTHNIGLQGMLGGQMLDIQD-EFIDETQVFMIQKMKTGALMCFACESGAI 198
             ++L     L   +G  GM  GQ LD+     + E +V  +   K G +   +   GA+
Sbjct: 180 HAVLLRVLAELARTVGSTGMAAGQFLDLAGASALGEAEVMQVLTKKFGEMAECSAACGAM 239

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227
           +  A  +E+  LR +G  +G++++L DD+
Sbjct: 240 LGGAGPDEEAALRRYGRAIGVLYELVDDM 268


>gi|163741857|ref|ZP_02149247.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
 gi|161385030|gb|EDQ09409.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
          Length = 332

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 11/211 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L+QT   M ++H  R+     + +  GGK++R  L    A L   +    +++ A +E I
Sbjct: 27  LIQT--RMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSGDNHVKLAATVEFI 84

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I
Sbjct: 85  HTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDI 142

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            +    ++     LQ      M    D   DE     + + KT AL   A ++G ++A+A
Sbjct: 143 LANASATIAEGEVLQ------MTAASDLATDEEIYLQVVRGKTAALFSAATQAGGVVANA 196

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + + + L  +G+ LGI FQ+ADDLLD + D
Sbjct: 197 PETQIDALFAYGDALGIAFQIADDLLDYQGD 227


>gi|299142039|ref|ZP_07035173.1| octylprenyl diphosphate synthase [Prevotella oris C735]
 gi|298576501|gb|EFI48373.1| octylprenyl diphosphate synthase [Prevotella oris C735]
          Length = 325

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 10/197 (5%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H++ LLS +   +   GGK++R  L+   A  F             +E +H  SL+HDD+
Sbjct: 28  HDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNFGRVSSVTQHAAVGLELLHTASLVHDDV 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG+ +V+  YD   +++ G+ +L+ A   +S   +++     S+L  +L+ 
Sbjct: 88  --VDESSERRGQASVNALYDNKVSVLVGDFILSTALLYVSKTHSEVIVRYLSELGRTLSD 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              LQ      + +IQ+E I ET  + I K KT AL       GA  A AS ++ E  R 
Sbjct: 146 GEILQ------LTNIQNEAITETAYYEIIKRKTAALFEACAAIGAESAGASHDDVEAARK 199

Query: 213 FGENLGIIFQLADDLLD 229
           FG+NLGIIFQ+ DD+ D
Sbjct: 200 FGQNLGIIFQIRDDIFD 216


>gi|157363190|ref|YP_001469957.1| polyprenyl synthetase [Thermotoga lettingae TMO]
 gi|157313794|gb|ABV32893.1| Polyprenyl synthetase [Thermotoga lettingae TMO]
          Length = 276

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 14/194 (7%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+LL  GK+IR  L+        V          A+E  H  SLIHDDLP +D+  +
Sbjct: 27  AMAYSLLSAGKRIRPVLIKLICEDMGVQEDLIWNPAMAVELFHTASLIHDDLPQIDDSPL 86

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRG+P+ H+ +    AI+AG+GL+  AF +++ +P   +  ++   L    T+++     
Sbjct: 87  RRGRPSCHVVFGNDMAILAGDGLMLMAFCVLNQTPADPVSKSMLFDLFSKSTYDV----- 141

Query: 160 LGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           L G+ +D+  EF     D   V  + + KTGAL  F    GAI+    +   E+L   G 
Sbjct: 142 LIGEAMDV--EFTGKEKDINDVIEMYRKKTGALFSFCFAIGAILMKKLE-YLEKLINVGS 198

Query: 216 NLGIIFQLADDLLD 229
             G+ FQ+ DDL D
Sbjct: 199 TFGVWFQIVDDLKD 212


>gi|170749228|ref|YP_001755488.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170655750|gb|ACB24805.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 289

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 114/226 (50%), Gaps = 22/226 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNV 67
           E+ +RI+  LD    +  +H +      LL+ A+RYA+  GG +IR  L    A +  + 
Sbjct: 2   ESGQRIEMALD----RAVAHAEAPGAPPLLAEALRYAVFPGGHRIRPRLCLSVARACGDD 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   ++   AAIE +HC SL+HDDLP  D+  +RR KP+VH+ + E  A++ G+ L+  A
Sbjct: 58  DPAGSVAAAAAIEFLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIAVLTGDALIVLA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM----IQKM 183
           FE ++  ++  +   R      L   +GL G   G    I      E++  +     Q+ 
Sbjct: 118 FETLA--RSVGRHPAR------LGRLVGLLGRAAGSPSGIAAGQAWESEAHISLSDYQQA 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTGAL      +    A A+  E E  R  GE LG  +Q+ADDL D
Sbjct: 170 KTGALF---AAATVAGAAAAGAEPEPWRRLGECLGEAYQVADDLRD 212


>gi|284162658|ref|YP_003401281.1| dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
 gi|284012655|gb|ADB58608.1| Dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
          Length = 327

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 10/184 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L          +    L    AIE IH ++LIHDD+  MD    RRG PTVH
Sbjct: 49  GGKRLRPVLTLLSCEAIGRDWKPILPSAIAIELIHNFTLIHDDI--MDKDEYRRGVPTVH 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + E TAI+AG+ L   AFEI+S    + ++ IR+   + +  ++ ++ +  GQ +D++
Sbjct: 107 RLFGEATAILAGDTLFAKAFEILSKCNVEAENVIRA---VEVIADVCVK-ICEGQYMDME 162

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D+  V    KM   KTG L+  +C   A++ +  +   + L  FG N GI FQ+ D
Sbjct: 163 FEKRDDVSVEDYLKMVEKKTGVLIACSCSIPAVL-YGEEKYVKPLWDFGLNCGIGFQIHD 221

Query: 226 DLLD 229
           D+LD
Sbjct: 222 DVLD 225


>gi|28572234|ref|NP_789014.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27]
 gi|28410365|emb|CAD66751.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei
           TW08/27]
          Length = 338

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 24/214 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++DLLL+T        +  L+S       GGK+ R  LV   + + +  +   +R  A I
Sbjct: 29  VEDLLLETVGDCHEIVSHLLVS-------GGKRARPLLVLLTSCMGSGINDAVIRAAAGI 81

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL HDD+  MDN YIR G  T H  + +  AI+AG+ L   A          L 
Sbjct: 82  ELIHLGSLYHDDV--MDNAYIRHGSITAHRLWGKSAAILAGDFLFAKA--------GVLG 131

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFM-IQKMKTGALMCFACES 195
            N+  + +   T     Q M+ GQ+   L I D  +D  + ++ + + KTG+L+  + + 
Sbjct: 132 LNLDKRAIAVQTE--AFQRMISGQLSETLGISDS-LDPLEAYIEVSRGKTGSLIAASAQV 188

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GAI+  AS +  E LR FGE++G+ FQL DD++D
Sbjct: 189 GAILGDASLSTLEPLRDFGESIGVAFQLVDDVID 222


>gi|260574939|ref|ZP_05842941.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
 gi|259022944|gb|EEW26238.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
          Length = 295

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 21/201 (10%)

Query: 38  RLLSAIRYALL-GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RL  A+ YA+  GG +IR + L++   +  +     +    AA+E IHC SL+HDDLPS 
Sbjct: 26  RLAQALPYAVTPGGARIRPTILLSVAIACGDDRPGLSNAAAAALELIHCASLVHDDLPSF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSL 150
           D+  IRRGKPT+H  ++E  A++ G+ L+  AF++++     +P   L       L+ +L
Sbjct: 86  DDADIRRGKPTIHKAFNEPLAVLTGDSLIILAFDVLARAAEDAPGRGLG------LIRTL 139

Query: 151 THNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               G+  G+  GQ  + +        +    + KTGAL   A   G   A A+  E E 
Sbjct: 140 AKRSGMPDGICAGQGWESEPTV----NLSAYHRSKTGALFIAATCMG---AQAAGQEPEP 192

Query: 210 LRCFGENLGIIFQLADDLLDC 230
               G  +G  FQ+ADDL D 
Sbjct: 193 WVELGSRIGEAFQVADDLRDA 213


>gi|163738897|ref|ZP_02146310.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
 gi|161387702|gb|EDQ12058.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
          Length = 332

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 11/211 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L+QT   M ++H  R+     + +  GGK++R  L    A L   +    +++ A +E I
Sbjct: 27  LIQT--RMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYSGDNHVKLAATVEFI 84

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I
Sbjct: 85  HTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDI 142

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            +    ++     LQ      M    D   DE     + + KT AL   A ++G ++A+A
Sbjct: 143 LANASATIAEGEVLQ------MTAASDLATDEGIYLQVVRGKTAALFSAATQAGGVVANA 196

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + + + L  +G+ LGI FQ+ADDLLD + D
Sbjct: 197 PETQIDALFAYGDALGIAFQIADDLLDYQGD 227


>gi|51891328|ref|YP_074019.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51855017|dbj|BAD39175.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 331

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 11/215 (5%)

Query: 18  TILDDLL-LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALR 74
           +I DDL  ++TA        + +L  +   LL  GGK+IR  LV   +    V     + 
Sbjct: 18  SIADDLRQVETAIEAALSTQETMLEEVSTHLLRSGGKRIRPALVILASRFPGVELKQVID 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V  A+E IH  +L+HDD+  +DN  +RRG+PTV+  ++   +++ G+ L   AF +++  
Sbjct: 78  VAVAVELIHMATLVHDDV--VDNADLRRGRPTVNALWNNQVSVLTGDYLFAKAFTLLADT 135

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  + S+++  ++     QG L  QM    D    E   +     KTG L+  AC 
Sbjct: 136 GNNRVVRLMSEVVREMS-----QGELA-QMASYFDVEQTEEDYYRRIARKTGYLIAEACR 189

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GA+MA   + + + +  +G  +G+ FQ+ADDLLD
Sbjct: 190 LGAVMAGVGEEQVQAVYDYGMGVGLSFQIADDLLD 224


>gi|327482515|gb|AEA85825.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri DSM
           4166]
          Length = 307

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D +  A+R   L  GK++R  L+       + +    L    A+E IH  SL  DD+P M
Sbjct: 50  DTVTQALREGTLAPGKRLRPLLLLLALGDLDADPAIGLDPACALEMIHAASLFLDDMPCM 109

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+PT+H+++ E  A++A   LL++A+ I +   + L    R+  +  L   +G
Sbjct: 110 DNASLRRGQPTIHLRFGEDVAVLASVALLSHAYGITAMAPS-LSPRQRNDAVALLARAVG 168

Query: 156 LQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            QG++ GQ  D+    Q + +D   V    ++KTG+L   A E  A++  A +     LR
Sbjct: 169 AQGLVRGQFRDLHGTGQAQQLDA--VIATNQLKTGSLFTAALELAALLVGADRALTAHLR 226

Query: 212 CFGENLGIIFQLADDLLD 229
            F   LG+ FQL DD+ D
Sbjct: 227 GFASELGMAFQLLDDIAD 244


>gi|223043259|ref|ZP_03613306.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit
           2) (spore germination protein c3) [Staphylococcus
           capitis SK14]
 gi|314933652|ref|ZP_07841017.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           caprae C87]
 gi|222443470|gb|EEE49568.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit
           2) (spore germination protein c3) [Staphylococcus
           capitis SK14]
 gi|313653802|gb|EFS17559.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           caprae C87]
          Length = 319

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 20/204 (9%)

Query: 34  QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLI 88
           Q  D+ L    + LL  GGK++R   V   +S F  +  T+    RV  A+E IH  +L+
Sbjct: 22  QSTDQTLEEASFHLLSSGGKRVRPVFVI-LSSQFGTSEGTSEDTYRVAVALELIHMATLV 80

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG+PT+  ++D+ TAI+ GN LL    + +S  K     +I S  ++
Sbjct: 81  HDDV--IDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHLSEIKDARVHSIISNSIV 138

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            +           G++   QD+F  E   T        KT  L+  A E GAI + AS+ 
Sbjct: 139 DVCR---------GELFQFQDQFNSEQNITNYLRRINRKTALLIQLATEVGAITSGASKE 189

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
              +L+  G  +G+ FQ+ DD+LD
Sbjct: 190 TIRKLKLIGHYIGMSFQIIDDVLD 213


>gi|15604342|ref|NP_220858.1| octaprenyl-diphosphate synthase (ispB) [Rickettsia prowazekii str.
           Madrid E]
 gi|3861034|emb|CAA14934.1| OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB) [Rickettsia prowazekii]
 gi|292572096|gb|ADE30011.1| Octaprenyl-diphosphate synthase [Rickettsia prowazekii Rp22]
          Length = 327

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 20/227 (8%)

Query: 8   KLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           K+Q+N K   T L+DL+   L++ + +  +    L+ A      GGK+IR  L    A +
Sbjct: 6   KIQQNLKDEVTQLNDLIISCLKSDAELIEKVGKYLVEA------GGKRIRPLLTIITAKM 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F+      +++ +A+E IH  +L+HDD+  +DN  +RR KPT ++ +   T+I+ G+ L 
Sbjct: 60  FDYKGNNHIKLASAVEFIHAATLLHDDV--VDNSTLRRFKPTANVIWGSKTSILVGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           + +F+++ +       N+  ++ +++S    + L  +   +++ I     DE Q   I K
Sbjct: 118 SQSFKLMVASGCIKAMNVLAKASVIISEGEVVQLVKLNERRIITI-----DEYQ--QIVK 170

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   ACE GAI+A       + ++ FG  LG IFQ+ DDLLD
Sbjct: 171 SKTAELFGAACEVGAIIAEQVDRVSKDVQNFGRLLGTIFQVIDDLLD 217


>gi|254488187|ref|ZP_05101392.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101]
 gi|214045056|gb|EEB85694.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101]
          Length = 332

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L   +    + + A +E IH  +L+H
Sbjct: 32  MASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPYHVHLAATVEFIHTATLLH 91

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++       +N+R   +LS
Sbjct: 92  DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTE-----TNNMRVLAILS 144

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
                  +G +  Q+   Q+   DE+    + + KT AL   A E G ++A A   + + 
Sbjct: 145 NASATIAEGEVL-QLTAAQNLATDESVYLQVVRGKTAALFSAATEVGGVIAGAPDAQVQA 203

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  FG+ LGI FQ+ DDLLD + D
Sbjct: 204 LFDFGDALGIAFQIVDDLLDYQGD 227


>gi|78189407|ref|YP_379745.1| isoprenyl synthetase [Chlorobium chlorochromatii CaD3]
 gi|78171606|gb|ABB28702.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Chlorobium chlorochromatii CaD3]
          Length = 331

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 34  QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q    L +  RY L G GK+IR FL          +   AL V  A+E +H ++LIHDD+
Sbjct: 31  QTPQTLYAPARYILEGKGKRIRPFLTLLACEAICGSPDDALDVALAVEILHNFTLIHDDI 90

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             MD   +R G+PTVH  ++   AI+ G+ ++ YA+E+      Q K + +++L+  L  
Sbjct: 91  --MDQAELRHGRPTVHKTWNVSAAILTGDMMIAYAYEL----ALQSKGSRQTELVHILND 144

Query: 153 -NIGLQGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEK 207
            NI +     GQ LD++ E + +  +     MI K KTG L+  A E+G +  +A+  + 
Sbjct: 145 ANITI---CEGQALDMELEEMPDASMSDYLDMIAK-KTGRLISAALEAGGVAGNATDEQL 200

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
             L  FGE +G  FQ+ DD LD
Sbjct: 201 RSLVLFGEKIGQAFQIQDDYLD 222


>gi|85705714|ref|ZP_01036811.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Roseovarius sp. 217]
 gi|85669704|gb|EAQ24568.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Roseovarius sp. 217]
          Length = 333

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 9/205 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  LV   A L   +    + + A +E IH  +L+H
Sbjct: 33  MASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYDGPFDVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   AF+++  P +    +I S    +
Sbjct: 93  DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGSLRVLDILSNASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   QD    E     + + KT AL   A E G ++A A ++  + 
Sbjct: 151 IAEGEVLQ------LSAAQDLATTEDIYLQVVRGKTAALFSAATEVGGVIAGAPEDHVKA 204

Query: 210 LRCFGENLGIIFQLADDLLDCEEDL 234
           L  +G+ LGI FQ+ DDLLD + D+
Sbjct: 205 LFEYGDALGIAFQIVDDLLDYQGDV 229


>gi|317123859|ref|YP_004097971.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043]
 gi|315587947|gb|ADU47244.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043]
          Length = 336

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 111/241 (46%), Gaps = 29/241 (12%)

Query: 1   MNGGLP---SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR--YALLGGKKIRS 55
           + G  P   + LQ+   R+D +L  ++          H D  ++A     A  GGK+ R 
Sbjct: 12  LPGATPELMAHLQDGLARVDALLRTVV---------DHEDPFIAAASSHLAQAGGKRFRP 62

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L    A L        +R  A +E  H  SL HDD+  MD   +RRG P+ +  YD  T
Sbjct: 63  LLTLLSAELGEGVTDDVVRAAAGVELTHLASLYHDDV--MDEAEVRRGVPSANAVYDNST 120

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFID 173
           AI+ G+ L   A E+I+    +    I++Q  + L           GQ+ D +     +D
Sbjct: 121 AILVGDLLFGKASELIAGLGAEAV-LIQAQTFVRLCS---------GQIRDDRPCPPDVD 170

Query: 174 ETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               ++ +   KTG+L   AC  GA+ +  S    E +R +GE +G+ FQLADDL+D   
Sbjct: 171 PIDYYLGVLADKTGSLTATACRYGAMFSGGSPELVETMRSYGEKVGMTFQLADDLIDIAS 230

Query: 233 D 233
           D
Sbjct: 231 D 231


>gi|254561892|ref|YP_003068987.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
           DM4]
 gi|254269170|emb|CAX25136.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
           DM4]
          Length = 288

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 14/219 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70
           +RI+T+LD+ +    SH +      LL+ AIRYA+  GG +IR  L    A +  + +  
Sbjct: 5   RRIETVLDNAI----SHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T+    AAIE +HC SL+HDDLP  D+  +RR KP+VH  +    A++ G+ L+  AFE 
Sbjct: 61  TSEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++    +    +   + L         G++ GQ  +  + ++D  +    Q+ KTGAL  
Sbjct: 121 LARGVVRSPTRLAGLVGLIARAAGSPSGIVAGQAWE-SEPYVDLVE---YQQAKTGALF- 175

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               +    A A+       R  GE LG  +Q+ADDL D
Sbjct: 176 --AAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRD 212


>gi|260429621|ref|ZP_05783598.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45]
 gi|260420244|gb|EEX13497.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45]
          Length = 333

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 33  MASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYEGPYHVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++  P      NI S    +
Sbjct: 93  DDV--VDESSQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVEPGNLRVLNILSNAAAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   QD    E     + + KT AL   A E G ++A   + + + 
Sbjct: 151 IAEGEVLQ------LTAAQDLKTTEDIYLQVVRGKTAALFSAATEVGGVIAGVPEEQVQA 204

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LGI FQ+ADDLLD + D
Sbjct: 205 LFTYGDALGIAFQIADDLLDYQGD 228


>gi|323489688|ref|ZP_08094915.1| heptaprenyl diphosphate synthase component II [Planococcus
           donghaensis MPA1U2]
 gi|323396819|gb|EGA89638.1| heptaprenyl diphosphate synthase component II [Planococcus
           donghaensis MPA1U2]
          Length = 324

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V       N N     +V   +E IH  SL+HDD+  +D+  IRRG+PTV 
Sbjct: 46  GGKRIRPVFVLLAGKFGNYNVDVMKQVAVPLELIHMASLVHDDV--IDDSEIRRGQPTVK 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q++   A+  G+ +L  A E I+  ++     I S+ ++ +           G+++ IQ
Sbjct: 104 AQWNNSVAMYTGDFILARALEHITEIESPRVHEILSKTLIEVCR---------GEIIQIQ 154

Query: 169 DEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++ +D+     F   K KT  L+  +CE GA+++   +     LR FG  +G+ FQ+ D
Sbjct: 155 DKYRLDQNLRDYFRRIKRKTALLISSSCELGALVSGTDEKTAAHLRRFGYFIGMSFQIID 214

Query: 226 DLLD 229
           D+LD
Sbjct: 215 DILD 218


>gi|149202965|ref|ZP_01879936.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Roseovarius sp. TM1035]
 gi|149143511|gb|EDM31547.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Roseovarius sp. TM1035]
          Length = 333

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  LV   A L   +    + + A +E IH  +L+H
Sbjct: 33  MASRHAPRIPQVTAHLVEAGGKRLRPMLVLATADLCGYDGPFDVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   AF+++  P +    +I S    +
Sbjct: 93  DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGSLRVLDILSNASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   QD    E     + + KT AL   A E G ++A A + + + 
Sbjct: 151 IAEGEVLQ------LSAAQDLATTEDIYLQVVRGKTAALFSAATEVGGVIAGAPETQIKA 204

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LGI FQ+ DDLLD + D
Sbjct: 205 LFEYGDALGIAFQIVDDLLDYQGD 228


>gi|67459231|ref|YP_246855.1| octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2]
 gi|67004764|gb|AAY61690.1| Octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2]
          Length = 327

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 125/227 (55%), Gaps = 20/227 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           K+Q++ K   T L+DL++        + ++ L+  +   LL  GGK+IR  L    A +F
Sbjct: 6   KIQQDLKDEVTKLNDLIISCL-----KSDEELIETVGKYLLEAGGKRIRPLLTIITAKMF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 61  DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182
            +F+++ +  +     I++  +L+    I  +G +  Q++ + +     IDE Q   I K
Sbjct: 119 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVI-QLVKLNERRIITIDEYQ--QIVK 170

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   +CE GAI+A    +  + +R FG+ LG IFQ+ DDLLD
Sbjct: 171 SKTAELFGASCEVGAIIAEQVDHISKDMRDFGKLLGTIFQVIDDLLD 217


>gi|304314300|ref|YP_003849447.1| geranyl pyrophosphate synthase [Methanothermobacter marburgensis
           str. Marburg]
 gi|2497458|sp|Q53479|IDSA_METTM RecName: Full=Bifunctional short chain isoprenyl diphosphate
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyl pyrophosphate synthase; Short=FPP
           synthase; AltName: Full=Geranyltranstransferase
 gi|11279236|pir||T45152 bifunctional short chain isoprenyl diphosphate synthase [imported]
           - Methanobacterium thermoautotrophicum
 gi|913252|gb|AAB32421.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanothermobacter thermautotrophicus]
 gi|302587759|gb|ADL58134.1| predicted geranyl pyrophosphate synthase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 325

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 27/227 (11%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           I  I  D LL+ + H+ T               GGKKIR  L          N   A  V
Sbjct: 23  ISDITPDTLLKASEHLITA--------------GGKKIRPSLALLSCEAVGGNPEDAAGV 68

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AAIE IH +SLIHDD+  MD+  +RRG+P+VH+ + E  AI+AG+ L + AFE +    
Sbjct: 69  AAAIELIHTFSLIHDDI--MDDDEMRRGEPSVHVIWGEPMAILAGDVLFSKAFEAV---- 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKM--KTGALMCFA 192
            +  D+ R +  L++  +  ++ +  GQ LD+  +E +D T+   ++ +  KT AL+  A
Sbjct: 123 IRNGDSERVKDALAVVVDSCVK-ICEGQALDMGFEERLDVTEDEYMEMIYKKTAALIAAA 181

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            ++GAIM  AS+ E E L  +G+ +G+ FQ+ DD LD    EE L K
Sbjct: 182 TKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGK 228


>gi|149913258|ref|ZP_01901792.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
 gi|149813664|gb|EDM73490.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
          Length = 333

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A +        + + A +E IH  +L+H
Sbjct: 33  MASRHAPRIPEVTAHLVEAGGKRLRPMLTLATADMCGYGGAFDVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   AF+++  P      N+R   +LS
Sbjct: 93  DDV--VDESQQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPG-----NLRVLDILS 145

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               +  +G +  Q+   +D   DE     + + KT AL   A E G ++A A + + + 
Sbjct: 146 NAAAVIAEGEVL-QLSAARDLKTDENIYLQVVRGKTAALFSAATEVGGVIADAPEAQIKA 204

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LGI FQ+ DDLLD + D
Sbjct: 205 LFDYGDALGIAFQIVDDLLDYQGD 228


>gi|330886861|gb|EGH20296.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020]
          Length = 296

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 23/235 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV-TECASLFNVN 68
           ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L    C +L  V 
Sbjct: 8   QSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACEALGGVA 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF
Sbjct: 63  E-DANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121

Query: 129 EIISSPKTQLKD-NIRSQLMLSLTHNIGLQGM--------LGGQMLDIQDEFIDETQVFM 179
             + +P    +D   R Q++  L    G  G         LG   L      +D+  +  
Sbjct: 122 TALLAPHLTSRDAETRLQMVNPLAAAAGPAGYGGAGQAIDLGSVGLK-----LDQAALEY 176

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D
Sbjct: 177 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESD 231


>gi|61653218|gb|AAX48172.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium
           DelRiverFos13D03]
          Length = 293

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSM 95
           +L  A+ YA+  GG +IR  ++   A     +       GA A+E IHC SL+HDDLP  
Sbjct: 26  QLAQALHYAVTPGGARIRPTILLSVAMACGDDRPALSDAGAVALEMIHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNI 154
           D+   RRGK TVH  + E  A++ G+ L+  AF+I++  +    D  R+ Q++  L+   
Sbjct: 86  DDADTRRGKATVHKAFSEPLAVLTGDSLIVLAFDILA--EAAGDDAKRALQMIRVLSRRT 143

Query: 155 GLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           G+  G+  GQ  + + E      +    + KTGAL   A + GA+ A       E L   
Sbjct: 144 GMPDGICAGQGWESEAEV----NLSAYHRAKTGALFIAATQMGALAAGQDCEPWEEL--- 196

Query: 214 GENLGIIFQLADDLLDC 230
           G  +G  FQ+ADDL D 
Sbjct: 197 GARIGEAFQVADDLRDA 213


>gi|126740547|ref|ZP_01756234.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
 gi|126718348|gb|EBA15063.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
          Length = 332

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 112/212 (52%), Gaps = 13/212 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L+QT   M ++H  R+     + +  GGK++R  L    A L        +++ A +E I
Sbjct: 27  LIQT--RMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYEGEHHIKLAATVEFI 84

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDN 141
           H  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L + +F++ + +   ++ D 
Sbjct: 85  HTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLKVLD- 141

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
               ++ + +  I    +L  QM    +   DE     + + KT AL   A E G ++A 
Sbjct: 142 ----ILANASATIAEGEVL--QMTAASNLATDEAVYLQVVRGKTAALFSAATEVGGVIAG 195

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AS+ E + L  +G+ LGI FQ+ADDLLD + D
Sbjct: 196 ASETEIKALFDYGDALGIAFQIADDLLDYQGD 227


>gi|183220059|ref|YP_001838055.1| octoprenyl-diphosphate synthase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910179|ref|YP_001961734.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774855|gb|ABZ93156.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778481|gb|ABZ96779.1| Octoprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase; OPP synthetase) [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 317

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR F         NV  ++ L VG+  E IH  SL+HDD+  +DN  IRRGKPT+ 
Sbjct: 40  GGKRIRPFSHYLFCQFMNVKDVSWLDVGSVAELIHAASLLHDDV--VDNAPIRRGKPTIG 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   TAI+AG+ LL      ++S        I SQ++  L+ +  LQ M   +  +I 
Sbjct: 98  ASFGNKTAILAGDYLLACGISRLNSLGNPDLMEIFSQVLRDLSVSELLQ-MEWEKNPNIT 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +  D+     I   KT +L     E+ AI+A+ S+ +++  R FG  LG +FQ  DD L
Sbjct: 157 LKIYDQ-----IIYGKTASLFGVCTEAAAILANQSKEKRKEFRQFGVRLGKLFQKKDDCL 211

Query: 229 DCEED 233
           D  ED
Sbjct: 212 DYFED 216


>gi|260460355|ref|ZP_05808607.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034000|gb|EEW35259.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 338

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 22/240 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHM---------QTQHNDRLLSAIRYALL--GGKKIRSFLVT 59
           EN KR    + DL+  TA+ M         +   +  ++  +   L+  GGK++R  L  
Sbjct: 8   ENGKREPASIKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTL 67

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +F  +    +++  A+E +H  +L+HDD+  +D   +RRGK T  + +    +++ 
Sbjct: 68  AAAQMFGYSGEGHVKLATAVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLV 125

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  AF ++    +     + +  +LS   +I  +G +  Q+   ++    E + F 
Sbjct: 126 GDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAKNLETTEDEHFA 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           + K KT AL   A E G ++A A++N++  LR +G NLG+ FQL DD LD     +DL K
Sbjct: 180 VIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239


>gi|163761016|ref|ZP_02168094.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica
           DFL-43]
 gi|162281797|gb|EDQ32090.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica
           DFL-43]
          Length = 338

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A++F  +    +++  ++E +H  +L+HDD+  +D   +RRG+ T  
Sbjct: 57  GGKRLRPMLTLASATMFGYSGDFHIKLATSVEFMHTATLLHDDV--VDESDLRRGRSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFKMMVEVGSLEALDVLSTAAAVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   ACE G I+A  S+ E+  LR +G NLG+ FQL DD+L
Sbjct: 175 DDYLS------VIRAKTAALFSAACEVGPIIAETSKAERSALRSYGINLGLAFQLIDDVL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|268316794|ref|YP_003290513.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
 gi|262334328|gb|ACY48125.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
          Length = 330

 Score = 92.4 bits (228), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 12/208 (5%)

Query: 33  TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T+    L   +RY L G GK++R  L+   A L+     + L    A+E  H ++L+HDD
Sbjct: 30  TREPAELYEPVRYVLSGTGKRMRPVLLMLAAELYGRPAESVLPAALAVEVFHAFTLVHDD 89

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MD+   RRG+PTVH+Q+DE TA++ G+ L+  ++ ++        +N     +L++ 
Sbjct: 90  I--MDHAAERRGRPTVHVQWDEATALLCGDYLMGLSYALLGQ-----VENAPLARVLAMF 142

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKE 208
           H + ++ +  GQ LD   E      V    +M   KT AL+    + G ++  A + + +
Sbjct: 143 HRM-VERLCEGQALDKAFETRAHVSVAEYLQMVDGKTSALLELCLQLGGLLGGAGEADLQ 201

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L   G NLG  FQ+ DDLLD     P+
Sbjct: 202 ALEQLGRNLGRAFQIQDDLLDLTATSPQ 229


>gi|82702937|ref|YP_412503.1| farnesyltranstransferase [Nitrosospira multiformis ATCC 25196]
 gi|82411002|gb|ABB75111.1| Farnesyltranstransferase [Nitrosospira multiformis ATCC 25196]
          Length = 322

 Score = 92.4 bits (228), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F         + A +E IH  +L+HDD+  +D   +RR K T +
Sbjct: 43  GGKRLRPALVILSAGAFGYTGQYHYNLAAIVEFIHTATLLHDDV--VDASELRRSKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        DN+R   +L+   N   +G +  Q+L+++
Sbjct: 101 ALFGNAASVLVGDFLYSRAFQMMVE-----VDNMRVMRVLADATNTIAEGEVL-QLLNVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   A   GAI+ +AS  E+E +  +G +LG  FQL DD+L
Sbjct: 155 DPDVDEENYLRVIRYKTAKLFEAATRLGAILGNASPAEEEAMAVYGMHLGTAFQLTDDML 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSGD 219


>gi|325690177|gb|EGD32181.1| geranyltranstransferase [Streptococcus sanguinis SK115]
          Length = 291

 Score = 92.4 bits (228), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F++    A  +V +A+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFDLELTEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++A      +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLIAEVEYFVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|330444019|ref|YP_004377005.1| geranyl transtransferase [Chlamydophila pecorum E58]
 gi|328807129|gb|AEB41302.1| geranyl transtransferase [Chlamydophila pecorum E58]
          Length = 293

 Score = 92.4 bits (228), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 41  SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + + YAL  GGK+IR  LV   A      H   +    A+E  H  +LI DDLP MDN  
Sbjct: 34  APVEYALKTGGKRIRPLLVCMLAHGIG-KHCDVMDSALAVEFAHTSTLIADDLPCMDNDD 92

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151
            RRG+PTVH  + E  A++A   L+  A+        +LK         ++   ++L +T
Sbjct: 93  ERRGRPTVHKVFGEALALLASYALIPAAYSHFHKNAKKLKKQGYNPQAIDVAYDIILEVT 152

Query: 152 H-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           + NIG  G+LGGQ  D+         V  I   KTGAL   A  SG +    S N   ++
Sbjct: 153 NRNIGCAGVLGGQYDDMFFSNKGREHVQSIMVKKTGALFEIASVSGWLFGGGSPNLLPQI 212

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             F  + G++FQ+ DD LD E+D
Sbjct: 213 IEFSRHFGLLFQIKDDFLDYEKD 235


>gi|332796336|ref|YP_004457836.1| farnesyltranstransferase [Acidianus hospitalis W1]
 gi|332694071|gb|AEE93538.1| farnesyltranstransferase [Acidianus hospitalis W1]
          Length = 326

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 126/230 (54%), Gaps = 15/230 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  K  D I+ ++  +   +++ +  +   ++I     GGK++R  +    + LF+ +  
Sbjct: 2   ELDKYFDEIIKNVNEEIEKYIKGEPKELYDASIYLLKAGGKRLRPLITVASSDLFSGDRK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A +  AA+E +H ++LIHDD+  MD   +RRG PTVH+++    AI+AG+ L   AFE+
Sbjct: 62  RAYKAAAAVEILHNFTLIHDDI--MDEDTLRRGMPTVHVKWGVPMAILAGDLLHAKAFEV 119

Query: 131 ISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKT 185
           +S     L D+ R  + LS  + ++ +  +  GQ +D++ E      +E  + MI+K KT
Sbjct: 120 LSEALEGL-DSKRFYMGLSEFSKSVII--IAEGQAMDMEFENRQDVTEEEYLEMIKK-KT 175

Query: 186 GALMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L  F+C +  G +++ A   + E L+ FG NLGI FQ+ DD+L    D
Sbjct: 176 AQL--FSCSAFLGGLVSGAEDKDLELLKEFGLNLGIAFQIIDDILGLTAD 223


>gi|89052673|ref|YP_508124.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
 gi|88862222|gb|ABD53099.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
          Length = 290

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 16/210 (7%)

Query: 27  TASHMQTQHN---DRLLSAIRYALL-GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIEC 81
           +A+  Q Q N    +L SA+ Y++  GG +IR  +    A +  +     A     AIE 
Sbjct: 12  SAAITQAQGNVAPTKLASALEYSVTPGGARIRPTICLSVALACGDPQPAMADAAATAIEL 71

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IHC SL+HDD+P  D+  +RRGKP+VH  Y E  A++AG+ L+  +FE+++  +    D 
Sbjct: 72  IHCASLVHDDMPCFDDADVRRGKPSVHKAYSEPLALLAGDSLIIASFEVLT--RVAHHDP 129

Query: 142 IRS-QLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           +R+ +LM  L  + G+  G+  GQ  + +D+      +    + KTGAL   A       
Sbjct: 130 LRAIELMKILGQSTGMPGGICAGQGWESEDKI----DLSAYHRAKTGALFTAATRM---G 182

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A A+  + E     G  +G  FQ+ADDL D
Sbjct: 183 AAAAGEDPEPWTELGARIGEAFQVADDLRD 212


>gi|76789367|ref|YP_328453.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13]
 gi|76167897|gb|AAX50905.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13]
          Length = 291

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 11/205 (5%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I YALLGG K++R  LV   A   +      L    AIE IH  +LI DDLP MD+
Sbjct: 29  LRDPIEYALLGGGKRVRPLLVGLFAEGVH-KERDVLDTAIAIEYIHTSTLIADDLPCMDD 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLML 148
             +RRGKP+VH  +DE +A++A   L+  A+  I      LK         +     ++ 
Sbjct: 88  DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKAVVSCEQDVEEAYEDILE 147

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            +    G+ G+LGGQ  DI      +  V  I K KTGAL   AC SG +     +    
Sbjct: 148 LIELRFGIGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESST 207

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            +  F E+ G++FQ+ DDL D  +D
Sbjct: 208 LVAEFAEHFGLLFQIRDDLADLSQD 232


>gi|2644975|emb|CAA05825.1| IspA protein; partial [Wolinella succinogenes]
          Length = 163

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 6/137 (4%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
               +N+ L   +R    GGK+ R   L+   ++L  +   +A     A+E +H YSLIH
Sbjct: 24  FHPHYNEYLWEMVRN---GGKRFRPRLLLGVVSALAPLLVKSAYAPALALEILHTYSLIH 80

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MDN   RRG PT+H++YDE +A++AG+ L T+AF +++  +  L  + +  L+  
Sbjct: 81  DDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHAFYLLA--QAPLGSDTKVALVRE 138

Query: 150 LTHNIGLQGMLGGQMLD 166
           L    G  GM+ GQ LD
Sbjct: 139 LASAGGAGGMVLGQALD 155


>gi|317504363|ref|ZP_07962347.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606]
 gi|315664485|gb|EFV04168.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606]
          Length = 325

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A  F             +E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  GGKRMRPILILLMAKNFGCVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             YD   +++ G+ +L+ A   +S   +++     S+L  +L+    LQ      + +IQ
Sbjct: 102 ALYDNKVSVLVGDFILSTALLYVSKTHSEVIVRRLSELGRTLSDGEILQ------LTNIQ 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E I ET  + I K KT AL       GA  A AS ++ E  R FG+NLGIIFQ+ DD+ 
Sbjct: 156 KEAISETAYYEIIKRKTAALFESCAAIGAESAGASDDDVEAARLFGQNLGIIFQIRDDIF 215

Query: 229 D 229
           D
Sbjct: 216 D 216


>gi|15605359|ref|NP_220145.1| dimethylallyltransferase [Chlamydia trachomatis D/UW-3/CX]
 gi|237803057|ref|YP_002888251.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804978|ref|YP_002889132.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311451|ref|ZP_05354021.1| dimethylallyltransferase [Chlamydia trachomatis 6276]
 gi|255317752|ref|ZP_05358998.1| dimethylallyltransferase [Chlamydia trachomatis 6276s]
 gi|3329075|gb|AAC68232.1| Geranylgeranyl pyrophosphate synthase [Chlamydia trachomatis
           D/UW-3/CX]
 gi|231273278|emb|CAX10193.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274291|emb|CAX11086.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436165|gb|ADH18339.1| dimethylallyltransferase [Chlamydia trachomatis G/9768]
 gi|296437093|gb|ADH19263.1| dimethylallyltransferase [Chlamydia trachomatis G/11222]
 gi|296438025|gb|ADH20186.1| dimethylallyltransferase [Chlamydia trachomatis G/11074]
 gi|297140527|gb|ADH97285.1| dimethylallyltransferase [Chlamydia trachomatis G/9301]
 gi|297748758|gb|ADI51304.1| Dimethylallyltransferase [Chlamydia trachomatis D-EC]
 gi|297749638|gb|ADI52316.1| Dimethylallyltransferase [Chlamydia trachomatis D-LC]
          Length = 291

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 11/205 (5%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I YALLGG K++R  LV   A   +      L    AIE IH  +LI DDLP MD+
Sbjct: 29  LRDPIEYALLGGGKRVRPLLVGLFAEGVH-KERDVLDTAIAIEYIHTSTLIADDLPCMDD 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLML 148
             +RRGKP+VH  +DE +A++A   L+  A+  I      LK         +     ++ 
Sbjct: 88  DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKAVVSCEQDVEEAYEDILE 147

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            +    G+ G+LGGQ  DI      +  V  I K KTGAL   AC SG +     +    
Sbjct: 148 LIELRFGVGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESST 207

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            +  F E+ G++FQ+ DDL D  +D
Sbjct: 208 LVAEFAEHFGLLFQIRDDLADLSQD 232


>gi|270265042|ref|ZP_06193305.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13]
 gi|270040976|gb|EFA14077.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13]
          Length = 310

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 30  GGKRIRPMIAVLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S      +++R   ++S   N+  +G +  Q++++ 
Sbjct: 88  AAFGNAASVLVGDFIYTRAFQMMTS-----LESLRVLALMSEAVNVIAEGEVL-QLMNVN 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI++ AS+ E++ L+ +G  LG  FQL DDLL
Sbjct: 142 DPDITEESYMRVIYSKTARLFEAAAQSSAILSEASEAEEKALQDYGRYLGTAFQLIDDLL 201

Query: 229 DCEED 233
           D   D
Sbjct: 202 DYSAD 206


>gi|255349012|ref|ZP_05381019.1| dimethylallyltransferase [Chlamydia trachomatis 70]
 gi|255503551|ref|ZP_05381941.1| dimethylallyltransferase [Chlamydia trachomatis 70s]
 gi|255507230|ref|ZP_05382869.1| dimethylallyltransferase [Chlamydia trachomatis D(s)2923]
 gi|289525671|emb|CBJ15152.1| dimethylallyltransferase [Chlamydia trachomatis Sweden2]
 gi|296435238|gb|ADH17416.1| dimethylallyltransferase [Chlamydia trachomatis E/150]
 gi|296438957|gb|ADH21110.1| dimethylallyltransferase [Chlamydia trachomatis E/11023]
          Length = 291

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 11/205 (5%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I YALLGG K++R  LV   A   +      L    AIE IH  +LI DDLP MD+
Sbjct: 29  LRDPIEYALLGGGKRVRPLLVGLFAEGVH-KERDVLDTAIAIEYIHTSTLIADDLPCMDD 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLML 148
             +RRGKP+VH  +DE +A++A   L+  A+  I      LK         +     ++ 
Sbjct: 88  DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKAVVSCEQDVEEAYEDILE 147

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            +    G+ G+LGGQ  DI      +  V  I K KTGAL   AC SG +     +    
Sbjct: 148 LIELRFGVGGILGGQYEDIFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESST 207

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            +  F E+ G++FQ+ DDL D  +D
Sbjct: 208 LVAEFAEHFGLLFQIRDDLADLSQD 232


>gi|302526347|ref|ZP_07278689.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4]
 gi|302435242|gb|EFL07058.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4]
          Length = 343

 Score = 92.0 bits (227), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 17/191 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L    A          +    A+E +H +SL+HDDL  MD    RR +PTV 
Sbjct: 63  GGKAVRSALAVVSAQAAGAPVEVGVPGAVAVELVHNFSLVHDDL--MDGDTERRHRPTVW 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +   +AI+ G+ +L  A E++    SP       + ++    L H         GQ L
Sbjct: 121 ALWGSASAILTGDAMLALAQEVVLDSGSPHAVAAGRLLTETTRRLIH---------GQFL 171

Query: 166 DIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  E  D+    +   +   KTGAL+  +   GA++A A     + L  FGE +G+ FQ
Sbjct: 172 DVAFEQRDDVGLAECVTMAAGKTGALLSASAAIGAVLAGAPAEVVDALSVFGEEIGLAFQ 231

Query: 223 LADDLLDCEED 233
           L DD+L    D
Sbjct: 232 LVDDVLGIWGD 242


>gi|239631997|ref|ZP_04675028.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066682|ref|YP_003788705.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
 gi|239526462|gb|EEQ65463.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439089|gb|ADK18855.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
          Length = 283

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L +A+ Y++  GGK++R  L+    ++++     AL   AA+E +H YSLIHDDLP+
Sbjct: 25  NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPA 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKPT H Q+ E  AI+AG+ LLT AF I+S    + K     Q+   L    
Sbjct: 85  MDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSRQYPE-KGAACVQI---LAEAA 140

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211
           G  GM+GGQ+LD+  E  ++  +  +++M   KTGAL+  A   G ++    + ++  L 
Sbjct: 141 GSNGMVGGQVLDMDGEN-EQYHLETLKRMHEAKTGALIQAAIAMGGLLVTIPETDQTALA 199

Query: 212 CFGENLGIIFQLADDLLDC 230
            F    G+ FQ+ DD+ D 
Sbjct: 200 DFSAAFGLGFQIKDDINDV 218


>gi|157827248|ref|YP_001496312.1| octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389]
 gi|157802552|gb|ABV79275.1| Octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389]
          Length = 327

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 105/183 (57%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A +F+ N  + +++ +A+E IH  +L+HDD+  +D+  +RR KPT +
Sbjct: 44  GGKRIRPLLTIITAKMFDYNGDSHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLD 166
           + +   T+I+ G+ L + +F+++ +  +    N+  ++  ++S    + L  +   ++++
Sbjct: 102 VIWGSKTSILVGDFLFSQSFKLMVASGSIKAMNVLAKASAIISKGEVVQLVKLNERRLIN 161

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           I+     E Q   I K KT  L   +C  GAI+A+ S +  + +  FG+ LG IFQ+ DD
Sbjct: 162 IE-----EYQ--QIVKSKTAELFGASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDD 214

Query: 227 LLD 229
           LLD
Sbjct: 215 LLD 217


>gi|84683979|ref|ZP_01011881.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84667732|gb|EAQ14200.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Rhodobacterales bacterium HTCC2654]
          Length = 331

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 13/230 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQT----ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           L  K  +  +R+   L D L Q      + M ++H  R+     + +  GGK++R  L  
Sbjct: 2   LDQKAHKPHERLAAHLKDDLSQVDEMIRARMASEHAPRIPEVTAHLVDAGGKRLRPMLTL 61

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L        + +  A+E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ 
Sbjct: 62  ASARLCGYEGGHHIHLATAVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLV 119

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   +F++++       D++R   +LS       +G +  Q+   QD    E   F 
Sbjct: 120 GDYLFARSFQLMTEA-----DSLRVLQVLSNASATITEGEVL-QLTAAQDLGTTEDTYFK 173

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + + KT AL   A E G I+A  S++  + L  +G+ LGI FQ+ DDLLD
Sbjct: 174 VVRGKTAALFAAATEVGGILAGVSEDRIKALHDYGDALGIAFQVVDDLLD 223


>gi|327382666|gb|AEA54142.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei LC2W]
 gi|327385860|gb|AEA57334.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei BD-II]
          Length = 283

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L +A+ Y++  GGK++R  L+    ++++     AL   AA+E +H YSLIHDDLP+
Sbjct: 25  NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPA 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKPT H Q+ E  AI+AG+ LLT AF I+S    Q ++   + + + L    
Sbjct: 85  MDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSR---QYREKGAACVQI-LAEAA 140

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211
           G  GM+GGQ+LD+  E  ++  +  +++M   KTGAL+  A   G +     + ++  L 
Sbjct: 141 GSNGMVGGQVLDMDGEN-EQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALA 199

Query: 212 CFGENLGIIFQLADDLLDC 230
            F    G+ FQ+ DD+ D 
Sbjct: 200 DFSAAFGLGFQIKDDINDV 218


>gi|327405188|ref|YP_004346026.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
 gi|327320696|gb|AEA45188.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
          Length = 329

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 11/186 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L GK++R  +V   A  F V    A+    AIE  H ++L+HDD+  MD   +RRG  TV
Sbjct: 45  LEGKRLRPIMVLMAAQGFGVTTEAAMSAAIAIEVFHNFTLVHDDI--MDKALVRRGTITV 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    AI+ G+ +L ++  ++    T+ K  +  +  L +      Q ++ GQ  D+
Sbjct: 103 HEKYGVDKAIVTGDAMLPHSMGLLIKG-TEEKSAVLMKSFLKMA-----QEVMEGQQYDM 156

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +    E +   +   + ++KT  L   ACE GAI+ +AS  ++++L  FG   G+ FQ+ 
Sbjct: 157 EFETQEIVTVEEYMNMIRLKTSVLFGCACEIGAILGNASIEDQKKLYDFGLYTGLAFQIM 216

Query: 225 DDLLDC 230
           DD LD 
Sbjct: 217 DDYLDT 222


>gi|114766799|ref|ZP_01445733.1| decaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601]
 gi|114540993|gb|EAU44051.1| decaprenyl diphosphate synthase [Roseovarius sp. HTCC2601]
          Length = 331

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 31  MASKHAPRIPEVTAHLVEAGGKRLRPLLTLASARLCGYEGPFHVHLAATVEFIHTATLLH 90

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   AF+++  P      NI S    +
Sbjct: 91  DDV--VDESKQRRGRPTANLLWDNKSSVLVGDYLFARAFQLMVEPGNLRVLNILSNAAAT 148

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   QD   +E     + + KT AL   A E G ++A   + + + 
Sbjct: 149 IAEGEVLQ------LTAAQDLRTNEDIYLQVVRGKTAALFSAATEVGGVIAGVEEEQVQA 202

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LGI FQ+ DDLLD + D
Sbjct: 203 LFDYGDALGIAFQIVDDLLDYQGD 226


>gi|50954065|ref|YP_061353.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950547|gb|AAT88248.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 353

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 21/226 (9%)

Query: 12  NSKRIDTILDD--LLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLVTECASLFNV 67
            ++++ T +DD   L++ A H + +  D L     RY L  GGK++R  L    A L   
Sbjct: 22  EARQVATAVDDGLALVEEALHREVRFADNLADVTTRYLLEAGGKRVRPMLTLLTAQLGKG 81

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N    L+   A+E  H  SL HDD+  MD+  +RRG PT    +    A++ G+ L   A
Sbjct: 82  NTPEVLQAAQAVEITHLASLYHDDV--MDDSQMRRGVPTAQFVWGNSVAVLTGDLLFARA 139

Query: 128 FEIISS---PKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            +++SS      QL+ +   +L L   H  IG Q        D +D      +V    + 
Sbjct: 140 SKLVSSLGERAIQLQADTFERLCLGQLHETIGPQ--------DGEDAVAHYIRVL---ED 188

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTG+L+  A + G + + A  + +E +  FGE +G+ FQL DD++D
Sbjct: 189 KTGSLIAVAAQMGIVFSGADSSYEEPVVTFGEKIGVAFQLIDDVID 234


>gi|166154843|ref|YP_001654961.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu]
 gi|166155718|ref|YP_001653973.1| dimethylallyltransferase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336124|ref|ZP_07224368.1| dimethylallyltransferase [Chlamydia trachomatis L2tet1]
 gi|165930831|emb|CAP04329.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu]
 gi|165931706|emb|CAP07283.1| dimethylallyltransferase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 291

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 101/205 (49%), Gaps = 11/205 (5%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I YALLGG K++R  LV   A   +      L    AIE IH  +LI DDLP MD+
Sbjct: 29  LRDPIEYALLGGGKRVRPLLVGLFAEGIH-KERDVLDTAIAIEYIHTSTLIADDLPCMDD 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLML 148
             +RRGKP+VH  +DE +A++A   L+  A+  I      LK         +     ++ 
Sbjct: 88  DDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKAVVSCEQDVEEAYEDILE 147

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            +    G+ G+LGGQ  D+      +  V  I K KTGAL   AC SG +     +    
Sbjct: 148 LIELRFGVGGILGGQYEDVFFHDFSKENVLGIIKKKTGALFEIACVSGWLFGGGERESST 207

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            +  F E+ G++FQ+ DDL D  +D
Sbjct: 208 LVAEFAEHFGLLFQIRDDLADLSQD 232


>gi|162448856|ref|YP_001611223.1| farnesyltranstransferase [Sorangium cellulosum 'So ce 56']
 gi|161159438|emb|CAN90743.1| Farnesyltranstransferase [Sorangium cellulosum 'So ce 56']
          Length = 303

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 16/200 (8%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMD 96
           LL+A ++A+  GG +IR  L    AS +      A    AA +E IHC SL+HDDLP  D
Sbjct: 27  LLAATQHAVFPGGARIRPRLCLAVASAYGDPAPEAADAAAAAVELIHCASLVHDDLPCFD 86

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRS-QLMLSL 150
           +  IRRG+P+VH  + E  A++AG+ L+  AFE ++     +  + + D  R+ +    L
Sbjct: 87  DAPIRRGRPSVHRAFGEPIAVLAGDQLIVLAFEALARGAFHAMASGVTDARRAVRFFEVL 146

Query: 151 THNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              +G+ QG++ GQ  + +     +  +   ++ KTGAL   A   GA+ A     +   
Sbjct: 147 GGGVGMPQGIIAGQAWESE----AKVPLSAYRRAKTGALFEAAATLGALSAG---QDGAA 199

Query: 210 LRCFGENLGIIFQLADDLLD 229
               G+ +G  +Q+ADD+LD
Sbjct: 200 WGDLGQRIGEAYQVADDVLD 219


>gi|329767036|ref|ZP_08258564.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341]
 gi|328837761|gb|EGF87386.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341]
          Length = 170

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L  +I Y+L+  GKKIR          + V++     +  AIE +H YSL+HDDLP M
Sbjct: 30  DILKESITYSLVNDGKKIRPLSFLYLLKYYEVDYTNYFDIALAIELVHTYSLVHDDLPEM 89

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   R GK T H  + +  A++ G+ +LT AFE++S  ++ +K +++ +L+    +  G
Sbjct: 90  DNDDYRWGKLTNHKVFGQDLAVLTGDAMLTLAFEVLS--ESNVKSDLKVRLIKQFANYSG 147

Query: 156 LQGMLGGQMLDIQ 168
             GM+ GQ+ D++
Sbjct: 148 AMGMIAGQVYDVK 160


>gi|222475573|ref|YP_002563990.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Florida]
 gi|255003563|ref|ZP_05278527.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Puerto Rico]
 gi|222419711|gb|ACM49734.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Florida]
          Length = 327

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 10/184 (5%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+IR  L+     +  +     +R+ AAIE IH  +L+HDD+  +D   +RRG  T
Sbjct: 47  LSGGKRIRPILLLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKT 104

Query: 107 VHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +  +    +I+ G+ LL  AF+ I+S    +L   +       +   I  Q M+  + L
Sbjct: 105 SNSLWGNKASILVGDFLLAAAFQWIVSCGNFELLTVLSGASRTIVAGEI--QQMVYSKNL 162

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           DI  E     +   I   KT AL    CES  +++ +    +E LR FG N GI FQ+ D
Sbjct: 163 DITRE-----KYIEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVD 217

Query: 226 DLLD 229
           DLLD
Sbjct: 218 DLLD 221


>gi|298346132|ref|YP_003718819.1| putative trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC
           43063]
 gi|304390108|ref|ZP_07372062.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315657365|ref|ZP_07910247.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|298236193|gb|ADI67325.1| possible trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC
           43063]
 gi|304326590|gb|EFL93834.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315491837|gb|EFU81446.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 350

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 22/220 (10%)

Query: 20  LDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-- 75
           LDD+  +L   +  Q +    L+S +R A  GGK++R  L    + L   N   + +V  
Sbjct: 32  LDDIEQMLVQETQTQREKTSALVSHLRAA--GGKRMRPLLTLLVSQLGAPNQPVSSQVKQ 89

Query: 76  -GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E  H  SL HDDL  MD   +RRG P  H+Q++   A++AG+ + + A  ++S  
Sbjct: 90  GAVAVELTHLASLYHDDL--MDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRASLLVSG- 146

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM-IQKMKTGALMCF 191
              L   I +Q      H+   + +  GQM DI   D   D  + ++ + + KTGAL+  
Sbjct: 147 ---LNPTIVAQ------HSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGALIGC 197

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   GA ++         +  FGE+LG+ FQ+ADD+LD +
Sbjct: 198 AALYGAELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQ 237


>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 38/192 (19%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+RY+LL GGK+I   +      L      TA+ V  A+E +H  SL+ DDLP MDN  I
Sbjct: 27  AMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDI 86

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKP+ H  + E                                    L  +IG QG++
Sbjct: 87  RRGKPSNHKAFGES----------------------------------ELARSIGSQGLV 112

Query: 161 GGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ LD+  E   E  +  ++ +   K G L+  +   GA++   S  + E LR FG  +
Sbjct: 113 AGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRCV 172

Query: 218 GIIFQLADDLLD 229
           G+++Q+ DD+LD
Sbjct: 173 GLLYQVVDDILD 184


>gi|191638624|ref|YP_001987790.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23]
 gi|190712926|emb|CAQ66932.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23]
          Length = 280

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L +A+ Y++  GGK++R  L+    ++++     AL   AA+E +H YSLIHDDLP+
Sbjct: 22  NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPA 81

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKPT H Q+ E  AI+AG+ LLT AF I+S    Q ++   + + + L    
Sbjct: 82  MDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSR---QYREKGAACVQI-LAEAA 137

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211
           G  GM+GGQ+LD+  E  ++  +  +++M   KTGAL+  A   G +     + ++  L 
Sbjct: 138 GSNGMVGGQVLDMDGEN-EQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALA 196

Query: 212 CFGENLGIIFQLADDLLDC 230
            F    G+ FQ+ DD+ D 
Sbjct: 197 DFSAAFGLGFQIKDDINDV 215


>gi|158523240|ref|YP_001531110.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
 gi|158512066|gb|ABW69033.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
          Length = 327

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 23/237 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           + G + S++  + + I+T L D L        T + D++     + L  GGK++R  L+ 
Sbjct: 5   LRGYIFSRVAGDMEAIETALADNL--------TPYFDKVREIAGHILFTGGKRVRPLLMV 56

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            CA L   +     RV    E +H  +L+HDD+  +D   +RRG P  H+ +D  +A++ 
Sbjct: 57  LCARLCRYDGSDDKRVSVMFEYLHTATLLHDDI--VDGAAMRRGSPAAHVVWDPASAVLV 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           G+ LL  +  I         D  R  LM  L     L+ M  G++  +  +    + E +
Sbjct: 115 GDFLLARSASIAV-------DTGRIALMKILADI--LEDMSQGEIHQLARKGNVNLSEAE 165

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              I   KT  LM  AC SGAI+A AS      L  +G NLG+ FQ+ DDLLD   D
Sbjct: 166 YRTIILHKTAVLMEGACRSGAILAGASDAHARALADYGRNLGMAFQMIDDLLDYTAD 222


>gi|307323924|ref|ZP_07603133.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306890373|gb|EFN21350.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 342

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 19/223 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL+          +RL    RYALL  GK +R  L+ E A          +    ++E
Sbjct: 23  ELLLRELDRRWPPEAERLHQISRYALLPAGKLLRPLLLMESAEAVGGGGPAVVPAALSVE 82

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------- 133
            +H  SL+HDD+  +D    RRG+P+V  +Y    AI+ G+ L+   F +++        
Sbjct: 83  YLHVGSLVHDDV--IDGDATRRGRPSVVARYGTADAIVTGDALMLGMFGVLTDGAEEAGG 140

Query: 134 -PKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
            P  ++   +R  ++  + L     ++G L G +    D ++       +  +KTGAL  
Sbjct: 141 LPPGRVLGAVRVFARAGVDLCRGQSMEGELRGDLGCGLDRYL------TMSSLKTGALFR 194

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            AC  GAI+   S  ++  L  + E+LG+ FQ+ DDLL    D
Sbjct: 195 AACRGGAILGGGSPAQQHALTAYAEHLGLAFQMHDDLLPYTSD 237


>gi|91205532|ref|YP_537887.1| octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C]
 gi|91069076|gb|ABE04798.1| Octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C]
          Length = 334

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 105/183 (57%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A +F+ N  + +++ +A+E IH  +L+HDD+  +D+  +RR KPT +
Sbjct: 51  GGKRIRPLLTIITAKMFDYNGDSHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLD 166
           + +   T+I+ G+ L + +F+++ +  +    N+  ++  ++S    + L  +   ++++
Sbjct: 109 VIWGSKTSILVGDFLFSQSFKLMVASGSIKAMNVLAKASAIISEGEVVQLVKLNERRLIN 168

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           I+     E Q   I K KT  L   +C  GAI+A+ S +  + +  FG+ LG IFQ+ DD
Sbjct: 169 IE-----EYQ--QIVKSKTAELFGASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDD 221

Query: 227 LLD 229
           LLD
Sbjct: 222 LLD 224


>gi|73671769|gb|AAZ80290.1| farnesyl diphosphate synthase [Vibrio sp. JL-73]
          Length = 147

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 12/151 (7%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLM 147
           HDDLP MD+  +RRG+ T HI +DE +AI+AG+ L T AF I++  K   + +I R  ++
Sbjct: 1   HDDLPGMDDDSLRRGQATCHIAFDEASAILAGDALQTLAFGILAEGKLSAEGDIYRIHMV 60

Query: 148 LSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             L    G  GM  GQ LD+  E   +D   +  I + KTGAL+  A   GA  A     
Sbjct: 61  KELAAASGAMGMCLGQALDLAAEGKRVDLEALETIHRNKTGALIRCAVRLGAYAA----G 116

Query: 206 EK-----ERLRCFGENLGIIFQLADDLLDCE 231
           EK     +RL  F   +G+ FQ+ DD+LD E
Sbjct: 117 EKGVACLKRLDTFSNAIGLAFQVQDDILDVE 147


>gi|308080718|ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
 gi|148535925|gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
          Length = 343

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 15/224 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  Q  + +  A+RYA+L G       K+    L      L      
Sbjct: 47  SLIADVESELDAAMPMQPPESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRA 106

Query: 71  TALRVGAAIECIHCYSLI--HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            AL   AA+E +H  SL+  HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+
Sbjct: 107 AALPAAAALEMLHAASLVLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAY 166

Query: 129 EIISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKM 183
             + S  T   D +   ++L     L   +G  GM  GQ LD+     + E +V  +   
Sbjct: 167 THVIS-HTPSPDPVPHAVLLRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVMQVLTK 225

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G +   +   GA++  A  +E+  LR +G  +G++++L DD+
Sbjct: 226 KFGEMAECSAACGAMLGGAGPDEEAELRRYGRTIGVLYELVDDI 269


>gi|218530905|ref|YP_002421721.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
 gi|218523208|gb|ACK83793.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
          Length = 288

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 14/219 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70
           +RI+T+LD  +    SH +      LL+ AIRYA+  GG +IR  L    A +  + +  
Sbjct: 5   RRIETVLDIAV----SHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T+    AAIE +HC SL+HDDLP  D+  +RR KP+VH  +    A++ G+ L+  AFE 
Sbjct: 61  TSEAAAAAIELLHCASLVHDDLPCFDDAAMRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++   T     +   + L         G++ GQ  +  + ++D  +    Q+ KTGAL  
Sbjct: 121 LARGVTCSPTRLAGLVGLIARAAGSPSGIVAGQAWE-SEPYVDLVE---YQQAKTGALF- 175

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               +    A A+       R  GE LG  +Q+ADDL D
Sbjct: 176 --AAATVAGAAAAGAPPLPWRLLGECLGAAYQVADDLRD 212


>gi|254995376|ref|ZP_05277566.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Mississippi]
 gi|255004689|ref|ZP_05279490.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Virginia]
          Length = 327

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 10/184 (5%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+IR  L+     +  +     +R+ AAIE IH  +L+HDD+  +D   +RRG  T
Sbjct: 47  LSGGKRIRPILLLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKT 104

Query: 107 VHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +  +    +I+ G+ LL  AF+ I+S    +L   +       +   I  Q M+  + L
Sbjct: 105 SNSLWGNKASILVGDFLLAAAFQWIVSCGNFELLTVLSGASRTIVAGEI--QQMVYSKNL 162

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           DI  E     +   I   KT AL    CES  +++ +    +E LR FG N GI FQ+ D
Sbjct: 163 DITRE-----KYIEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVD 217

Query: 226 DLLD 229
           DLLD
Sbjct: 218 DLLD 221


>gi|56417209|ref|YP_154283.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St.
           Maries]
 gi|56388441|gb|AAV87028.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St.
           Maries]
          Length = 327

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 10/184 (5%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+IR  L+     +  +     +R+ AAIE IH  +L+HDD+  +D   +RRG  T
Sbjct: 47  LSGGKRIRPILLLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKT 104

Query: 107 VHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +  +    +I+ G+ LL  AF+ I+S    +L   +       +   I  Q M+  + L
Sbjct: 105 SNSLWGNKASILVGDFLLAAAFQWIVSCGNFELLTVLSGASRTIVAGEI--QQMVYSKNL 162

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           DI  E     +   I   KT AL    CES  +++ +    +E LR FG N GI FQ+ D
Sbjct: 163 DITRE-----KYIEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVD 217

Query: 226 DLLD 229
           DLLD
Sbjct: 218 DLLD 221


>gi|189463880|ref|ZP_03012665.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM
           17393]
 gi|189438453|gb|EDV07438.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM
           17393]
          Length = 324

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 20/219 (9%)

Query: 22  DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALR 74
           +LL +  SH+     T+    L + + Y L +GGK+IR  L+    +L+  +V  + A  
Sbjct: 6   ELLEKINSHITDLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLMAYNLYQEDVTRIYAPA 65

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A++ ++  
Sbjct: 66  IG--IEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLILAYQFMAEC 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCF 191
                  +    + SLT    L+   G QM    + +++   E  + MI ++KT  L+  
Sbjct: 122 SPSFLKEVMD--LFSLT---ALEICEGQQMDMEFEQRNDVAAEEYLEMI-RLKTAVLLAA 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   GA +  AS  + +RL  FG  +G+ FQL DDLLD 
Sbjct: 176 SLRIGARLGGASVEDADRLYDFGMQIGVAFQLKDDLLDV 214


>gi|332361748|gb|EGJ39552.1| geranyltranstransferase [Streptococcus sanguinis SK1056]
          Length = 291

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  L+ E    F +    A  +V +A+E IH  SLIHDDLP+MD+   RRG+ T 
Sbjct: 38  GGKRIRPLLLLELIQAFGLELAEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTS 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H ++ E  AI+AG+ L    + +++  + +L   ++  L+  L+   G  GM+ GQ+LD+
Sbjct: 98  HKKFGEDMAILAGDSLFLDPYGLLA--RAELPSQVKVDLISELSLAAGSFGMVAGQVLDM 155

Query: 168 QDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           Q E   I    +  I   KTG L+ +   +  ++A      +++LR  GE LG+ FQ+ D
Sbjct: 156 QGEGQAISLEDLKTIHANKTGKLLMYPFVAAGLIAEVEYFVQDKLRRIGELLGLAFQVRD 215

Query: 226 DLLDC 230
           D+LD 
Sbjct: 216 DILDV 220


>gi|313619081|gb|EFR90887.1| geranyltranstransferase [Listeria innocua FSL S4-378]
          Length = 188

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 3/147 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV       N+  +  L+   A+E IH YSLIHDDLP+MD+   RRGK T H
Sbjct: 43  GGKRIRPMLVFATLQALNIEPMRGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKWTNH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y + TAI+AG+ LLT AF I++  +  L    R  L+  ++++ G +GM+GGQ  D++
Sbjct: 103 KIYGDATAILAGDALLTLAFSILAEDE-NLSFETRIALINQISYSSGAEGMVGGQQADME 161

Query: 169 DEFIDET--QVFMIQKMKTGALMCFAC 193
            E    T  ++  I   KTG L+ FA 
Sbjct: 162 AENKQVTLEELASIHARKTGELLIFAV 188


>gi|21673095|ref|NP_661160.1| isoprenyl synthetase [Chlorobium tepidum TLS]
 gi|21646167|gb|AAM71502.1| isoprenyl synthetase [Chlorobium tepidum TLS]
          Length = 332

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 22/200 (11%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L    RY L G GK+IR FL    A   +     AL V   IE +H ++L+HDD+  MD 
Sbjct: 37  LYDPARYILEGKGKRIRPFLTLLAAEAVSGKSDNALGVALGIEVLHNFTLMHDDI--MDQ 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI----ISSPKTQLKDNIRSQLMLSLTHN 153
             +R G+PTVH Q++   AI++G+ ++ YA+E+    ISS         R   ++ + ++
Sbjct: 95  ADLRHGRPTVHKQWNVNAAILSGDMMIAYAYELALKAISS---------RHAEIIHIFND 145

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKER 209
             +  +  GQ LD++ E   +  +     MI K KTG L+  A E+G +    +  +   
Sbjct: 146 ANIT-ICEGQALDMELEQRKDVTIADYLDMISK-KTGRLISAALEAGGVAGDGTPEQIAA 203

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  FGE +G  FQ+ DD LD
Sbjct: 204 LVTFGEKIGRAFQIQDDYLD 223


>gi|313675607|ref|YP_004053603.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126]
 gi|312942305|gb|ADR21495.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126]
          Length = 326

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 15/205 (7%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
            L   IRY + LGGK++R  L      L+  N    +    A+E  H ++L+HDD+  MD
Sbjct: 27  ELYEPIRYIMSLGGKRMRPLLSLLSYQLYKDNIKEVIPASIAVEIFHNFTLMHDDI--MD 84

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHNI 154
           N  +RRG+ TVH +++   AI++G+ +L  A++  I +SP  +L +      +L   +  
Sbjct: 85  NAPLRRGQQTVHEKWNSPVAILSGDVMLVKAYQQLIANSPTEKLTE------ILEKFNRC 138

Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            ++ +  GQ +D+   + E + E     + ++KT  L+ F+ E G I+A  ++ ++  L 
Sbjct: 139 AIE-VCEGQQIDMNFEEQEQVQEADYIEMIRLKTAVLLGFSLEFGGILAMDNEADQALLY 197

Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
             G N GI FQL DDLLD   D  K
Sbjct: 198 QMGVNAGIGFQLMDDLLDVYADQDK 222


>gi|17481248|dbj|BAB79206.1| farnesyl diphosphate synthase [Rhodovulum sp. CP-10]
          Length = 144

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 7/135 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PTVH+++D+ TA++ G+ L T AF++++ P       +R  L+ SL    G+ GM
Sbjct: 12  LRRGQPTVHVKWDDGTALLVGDALQTLAFDLLADPACHPDPGVRIDLVASLARASGIDGM 71

Query: 160 LGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ  DI  E         ++  +Q  KTGAL+ ++ E+GA +  A   +   L  +  
Sbjct: 72  VLGQAQDIAAETAGRPLTLAEITELQANKTGALIRWSAEAGARLGRA---DIAPLSSYAT 128

Query: 216 NLGIIFQLADDLLDC 230
            LG+ FQ+ADD+LD 
Sbjct: 129 ALGLAFQIADDILDA 143


>gi|116495118|ref|YP_806852.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
 gi|227534867|ref|ZP_03964916.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|116105268|gb|ABJ70410.1| farnesyl-diphosphate synthase [Lactobacillus casei ATCC 334]
 gi|227187623|gb|EEI67690.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 283

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L +A+ Y++  GGK++R  L+    ++++     AL   AA+E +H YSLIHDDLP+
Sbjct: 25  NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDGVIADALPAAAALEYVHTYSLIHDDLPA 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKPT H Q+ E  AI+AG+ LLT AF I+S    + K     Q+   L    
Sbjct: 85  MDDDDLRRGKPTNHKQFGEALAILAGDALLTDAFAILSREYPE-KGAACVQI---LAEAA 140

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLR 211
           G  GM+GGQ+LD+  E  ++  +  +++M   KTGAL+  A   G +     + ++  L 
Sbjct: 141 GSNGMVGGQVLDMDGEN-EQYHLETLKRMHEAKTGALIQAAIAMGGLFVTIPETDQTALA 199

Query: 212 CFGENLGIIFQLADDLLDC 230
            F    G+ FQ+ DD+ D 
Sbjct: 200 DFSAAFGLGFQIKDDINDV 218


>gi|217978204|ref|YP_002362351.1| Polyprenyl synthetase [Methylocella silvestris BL2]
 gi|217503580|gb|ACK50989.1| Polyprenyl synthetase [Methylocella silvestris BL2]
          Length = 289

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 101/195 (51%), Gaps = 11/195 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSM 95
           RL +AIRYA+  GG +IR  L    ++     +L A    A  IE +HC SL HDDLP  
Sbjct: 26  RLAAAIRYAIFPGGARIRPRLCLAVSAACGAQNLGASAAAAGAIELLHCASLAHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRGKP+VH  + E  A++AG+ ++  AFE I+      + ++   L+ ++    G
Sbjct: 86  DDAPTRRGKPSVHAAFGEALAVLAGDAMIVMAFEAIAR-AFMDRPHLLPPLVQTIARAAG 144

Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  G+  GQ  + + +          Q+ KTG+L   A  +GA+ A A        R  G
Sbjct: 145 MPSGIAAGQGYESEPQLARS----QYQRAKTGSLFVAATVAGALAAGADGAP---WRMLG 197

Query: 215 ENLGIIFQLADDLLD 229
           E LG  +Q+ADD+ D
Sbjct: 198 EGLGEAYQIADDIRD 212


>gi|304321788|ref|YP_003855431.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis
           HTCC2503]
 gi|303300690|gb|ADM10289.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis
           HTCC2503]
          Length = 316

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 5/182 (2%)

Query: 42  AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A R++LL  GK+IR+ L    A     +   AL    A+E IH  SL+ DDLP+MD+  +
Sbjct: 48  AARHSLLAPGKRIRAVLTLLAARECGGSLERALDTACAVEMIHTASLVIDDLPAMDDADL 107

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+PT H  + E TAI+A  GLL  A+ ++ + +  L    ++++   L+  +G +G++
Sbjct: 108 RRGRPTCHRAFGESTAILAAIGLLNGAYGVVMAAE-PLSAAEKTKIASILSSAVGWRGLV 166

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            GQ LD+       T +  IQ  KTG L   A  +G   A     +   L  F   LG  
Sbjct: 167 QGQALDLNP---GTTSLETIQDGKTGVLFEAAVLAGEQTAGWVSEKSVALAAFATALGRA 223

Query: 221 FQ 222
           +Q
Sbjct: 224 YQ 225


>gi|222085054|ref|YP_002543583.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter
           K84]
 gi|221722502|gb|ACM25658.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter
           K84]
          Length = 455

 Score = 91.3 bits (225), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L+N      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 174 GGKRLRPMLTIASAALYNYQGDNHIKLATSVEFLHTATLLHDDV--VDESDLRRGKSTAR 231

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 232 MIWGNQASVLVGDFLLGQAFRMMVEVGSLEALDVLSSAACVIAEGEVLQLSVSKNMETTE 291

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A+A + E+  L+ +G NLG+ FQL DD L
Sbjct: 292 DDYLS------VIRAKTAALFSAAAEVGPIVANAGKAERNALKSYGTNLGLAFQLVDDAL 345

Query: 229 D 229
           D
Sbjct: 346 D 346


>gi|288560181|ref|YP_003423667.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
           [Methanobrevibacter ruminantium M1]
 gi|288542891|gb|ADC46775.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
           [Methanobrevibacter ruminantium M1]
          Length = 331

 Score = 91.3 bits (225), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 100/194 (51%), Gaps = 9/194 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L          N   AL+  AAIE IH +SLIH     MD+  +RRG P+VH
Sbjct: 42  GGKMLRPALTLISCEAVGGNKEDALKTAAAIELIHTFSLIH--DDIMDDDDMRRGMPSVH 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +DE  AI+AG+ L + AFE+I S K +          L+   +  ++ +  GQ  D+ 
Sbjct: 100 KVWDEPLAILAGDTLFSKAFEMIISSKEENAHPEHVANALATVADACVK-ICEGQASDMS 158

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D  + E +   +   KTGAL+  A ++GAIM  A + E   L  +G  +GI FQ+ D
Sbjct: 159 FEGDFDVKEAEYSEMIYKKTGALIAAATKAGAIMGGADEKEVTALYEYGRMIGIAFQIQD 218

Query: 226 DLLDC---EEDLPK 236
           D LD    E+DL K
Sbjct: 219 DYLDVISDEKDLGK 232


>gi|148244594|ref|YP_001219288.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326421|dbj|BAF61564.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA]
          Length = 284

 Score = 91.3 bits (225), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 9/198 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMD 96
           L  A+RY+ L  GK+ R  L    A++F+  HL  +   + AIE IH YSLIHDDLP+MD
Sbjct: 24  LTKAMRYSTLTNGKRFRPILTYSVANIFST-HLDLVDSSSCAIEFIHAYSLIHDDLPAMD 82

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  IR  +PT H  + E  AI+ G+GL T AF+++ +    +  + + +L+ SLTH    
Sbjct: 83  DDDIRHNQPTCHKLFGEAQAILVGDGLQTLAFKVLVNDNL-IGSDTKIELIKSLTH--AS 139

Query: 157 QGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-LRCF 213
             M  GQ +D  I  + ++ T +  + + KTGAL+  A   GAI++    N+ +  L  F
Sbjct: 140 FEMAEGQAIDLSIIAKQVNITTLETMHRKKTGALLNCAVNLGAIVSKNCNNKDQTILNIF 199

Query: 214 GENLGIIFQLADDLLDCE 231
            +++G+ +Q+ DD+LD E
Sbjct: 200 SKDIGLAYQIQDDVLDIE 217


>gi|119384763|ref|YP_915819.1| trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222]
 gi|119374530|gb|ABL70123.1| Trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222]
          Length = 333

 Score = 91.3 bits (225), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 9/201 (4%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            M ++H  R+     + +  GGK++R  LV   A L      + + + AA+E IH  +L+
Sbjct: 32  RMASRHAPRIPEVTAHLVEAGGKRLRPMLVLAAARLCGYAGESHILLAAAVEFIHTATLL 91

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++  ++     I +    
Sbjct: 92  HDDV--VDESQQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMADTESMQVMRILANASA 149

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           ++     LQ      +   QD    E     I + KT AL   A E+GA++A A    + 
Sbjct: 150 TIAEGEVLQ------LTAAQDVSTTEDTYIQIVRGKTAALFSAATEAGAVVAGADPAVQR 203

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  +G+ LGI FQ+ DDLLD
Sbjct: 204 ALFDYGDALGIAFQIVDDLLD 224


>gi|85703528|ref|ZP_01034632.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217]
 gi|85672456|gb|EAQ27313.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217]
          Length = 289

 Score = 91.3 bits (225), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 13/201 (6%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDD 91
           Q   RL  A+ YA   GG +IR  ++   A     +    +    AA+E +HC SL+HDD
Sbjct: 22  QTPARLADALDYATSPGGARIRPTILMSVAMACGDDRPDLSDAAAAALEIMHCASLVHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSL 150
           LP  D+  +RRGK +VH  Y E  A++ G+ L+  +FEI++  +    D  R+  L+L+L
Sbjct: 82  LPCFDDADLRRGKASVHRAYSEPLAVLTGDALIIMSFEILA--RVAHHDAGRATALILAL 139

Query: 151 THNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               G+  G+  GQ  + + +   E       + KTGAL   A + GAI   A+ +E E 
Sbjct: 140 ARRSGMPNGICAGQGWESEPKVDLEA----YHRSKTGALFIAATQMGAI---AAGHEPEP 192

Query: 210 LRCFGENLGIIFQLADDLLDC 230
               G  +G  FQ+ADDL D 
Sbjct: 193 WYELGARIGAAFQVADDLRDA 213


>gi|327440778|dbj|BAK17143.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
           StLB046]
          Length = 324

 Score = 91.3 bits (225), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 109/208 (52%), Gaps = 20/208 (9%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           L ++SH+    +  LL A      GGK+IR       A   + N      +   +E IH 
Sbjct: 28  LNSSSHLLNDASVHLLQA------GGKRIRPVFTLLSAKFGDYNIDRMKNIAVPLELIHM 81

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+HDD+  +DN  +RRG+ TV  Q++   A+  GN +   A + ++S      +N R+
Sbjct: 82  GSLVHDDV--IDNSDMRRGRETVKAQWNNRVAMYTGNFIFARALQYVTSI-----ENPRA 134

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAH 201
             +L+ T    +  ++ G+++ I+D+F +D++    F   K KT  L+  +CE GA+++ 
Sbjct: 135 HQILAKT----MVELVNGEVIQIEDKFRLDQSLKDYFRRIKRKTALLIESSCELGAVVSG 190

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           A +     L+ +G  +G+ FQ+ DD+LD
Sbjct: 191 ADEKTARHLKRYGYFVGMSFQIVDDILD 218


>gi|167754003|ref|ZP_02426130.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216]
 gi|167658628|gb|EDS02758.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216]
          Length = 337

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 14/201 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL + I Y+L + GK++R  L+     +F+     A+   AA+E  H ++L+HDD+  MD
Sbjct: 40  RLYAPISYSLTMSGKRLRPMLLMLTCGIFSDQPQAAMPAAAAVEVFHNFTLLHDDI--MD 97

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG P+V  ++ +  AI++G+ +L  A+ ++S    Q+   I     L+  + + +
Sbjct: 98  NAAMRRGNPSVFAKWGQNVAILSGDAMLISAYRLLSEYPPQVLPQI-----LARFNTMAI 152

Query: 157 QGMLGGQMLDIQDEFIDETQV----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           + +  GQ  D+  E  +   V     MI+ +KT AL+  A   GAI+  A + + +RL  
Sbjct: 153 E-VCEGQQYDMDFETRESVSVEEYLHMIE-LKTSALLSGATVIGAIIGGAGEEDCQRLYR 210

Query: 213 FGENLGIIFQLADDLLDCEED 233
           F   LG+ FQL DDLLD   D
Sbjct: 211 FATELGLAFQLQDDLLDSYGD 231


>gi|157964658|ref|YP_001499482.1| octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5]
 gi|157844434|gb|ABV84935.1| Octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5]
          Length = 363

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 125/227 (55%), Gaps = 20/227 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           K+Q++ K   T L++L++        + ++ L+  +   LL  GGK+IR  L    A +F
Sbjct: 42  KIQQDLKDAVTKLNNLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 96

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 97  DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 154

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182
            +F+++ +  +     I++  +L+    I  +G +  Q++ + +     IDE Q   I K
Sbjct: 155 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVV-QLVKLNERRIITIDEYQ--QIVK 206

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   ACE GAI+A    +  + ++ FG+ LG IFQ+ DDLLD
Sbjct: 207 SKTAELFGAACEVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLD 253


>gi|258406530|ref|YP_003199272.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692]
 gi|257798757|gb|ACV69694.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692]
          Length = 322

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 28/213 (13%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           LD L++  ASH+        L A      GGK++R  L    A  F         +  A+
Sbjct: 26  LDPLIVPVASHV--------LGA------GGKRLRPILCVLTAEAFGYRDKEVYPLATAL 71

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D   +RRG+P+ H+ +     ++AG+ LL  A + I+       
Sbjct: 72  ELLHSATLIHDDI--LDGAALRRGQPSAHLAFGVQETVLAGDALLAMANKCIAGYGQPEL 129

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESG 196
             I S+ +++  +         G++++I   ++  + E   F I   KT  L+  +CE G
Sbjct: 130 MRIASEAIMATAN---------GEIMEIAQLREPRLSEEDYFQIITGKTAVLIQASCECG 180

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A++A A   +++  +  G NLGI FQL DD LD
Sbjct: 181 AVLAGAKGPQRQAAQDLGRNLGIAFQLVDDALD 213


>gi|198276974|ref|ZP_03209505.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135]
 gi|198270499|gb|EDY94769.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135]
          Length = 327

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I Y L LGGK++R  L+    +L+  +        A IE  H ++L+HDDL  MD 
Sbjct: 29  LYDPIEYVLGLGGKRLRPVLMLLAYNLYKEDVTRIFSQAAGIETYHNFTLLHDDL--MDK 86

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGL--LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
             +RR KPTVH ++DE TAI++G+ +  L Y F +   P   ++  +      +L    G
Sbjct: 87  ADMRRNKPTVHKKWDENTAILSGDAMLILAYQFMMKECPLECVERVMEVFGRTALEVCEG 146

Query: 156 LQG-MLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            Q  M     LD+  DE+I+     MI ++KT  L+  A + GAI+  A + + + L  F
Sbjct: 147 QQWDMEFEHRLDVTVDEYIE-----MI-RLKTSVLLAAALKIGAILGGAPEKDAQLLYDF 200

Query: 214 GENLGIIFQLADDLLDCEED 233
           G  +G+ FQL DD LD   D
Sbjct: 201 GIKMGLAFQLQDDYLDVYGD 220


>gi|126726042|ref|ZP_01741884.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium
           HTCC2150]
 gi|126705246|gb|EBA04337.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium
           HTCC2150]
          Length = 332

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + M ++H  R+     + +  GGK+IR  +    A +   +    + + A +E IH  +L
Sbjct: 31  ARMASEHAPRIPEVTAHLVEAGGKRIRPMMTLAAAKMCGYDGPYHINLAATVEFIHTATL 90

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D    RRG+ T ++ +D  ++I+ G+ L   AF+++   ++    +I S   
Sbjct: 91  LHDDV--VDESSQRRGRATANLLWDNKSSILVGDYLFARAFQLMVEAESLTVLDILSNAS 148

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            ++     LQ      M   QD   DE     + + KT AL   A E G ++A+A     
Sbjct: 149 ATIAEGEVLQ------MTAAQDLETDEATYLKVVRGKTAALFSAATEVGGVIANAPAEHT 202

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDL 234
           + L  FG+ LGI FQ+ DDLLD +  L
Sbjct: 203 KALFDFGDALGISFQIVDDLLDYDGSL 229


>gi|197121567|ref|YP_002133518.1| polyprenyl synthetase [Anaeromyxobacter sp. K]
 gi|196171416|gb|ACG72389.1| Polyprenyl synthetase [Anaeromyxobacter sp. K]
          Length = 293

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 109/203 (53%), Gaps = 17/203 (8%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93
           RL+ A+RYALLGG K++R  LV            +   A+R   A+E IH YSL+HDDLP
Sbjct: 36  RLVEAMRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+PTVH  YDE TA++ G+GL + AF  +++SP     D   + L   L  
Sbjct: 96  AMDDDDLRRGRPTVHKAYDEPTAVLVGDGLQSLAFAHLLASP-----DPAAAPLARLLAE 150

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           N  L  M+ GQ  D+  E   + E +V  + + KT         + A  A  +    E +
Sbjct: 151 NAQL--MVEGQARDMAGEHARLGEAEVMELMRTKT---GALLAAAVAGGARCAGVPVEAV 205

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
              G  LG+ FQ+ADDLLD   D
Sbjct: 206 YPVGLKLGLAFQIADDLLDLTAD 228


>gi|242373777|ref|ZP_04819351.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348514|gb|EES40116.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
           M23864:W1]
          Length = 332

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 26/207 (12%)

Query: 34  QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLI 88
           + +D+ L    + LL  GGK++R   V   +S F  +  T+    RV  A+E IH  +L+
Sbjct: 35  KSSDQTLEDAAFHLLSSGGKRVRPVFVI-LSSQFGDSKDTSENTYRVAVALELIHMATLV 93

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG+PT+  ++D+ TAI+ GN LL    + +S    ++KD        
Sbjct: 94  HDDV--IDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHLS----EIKD-------- 139

Query: 149 SLTHNIGLQGML---GGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHA 202
           S  HNI  + ++    G++   QD+F  D+     ++++  KT  L+  A E GA+ ++A
Sbjct: 140 SRVHNIISKSIVDVCKGELFQFQDQFNSDQNITNYLRRINRKTALLIQLATEVGALTSNA 199

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229
           S     +L+  G  +G+ FQ+ DD+LD
Sbjct: 200 SDEVVRKLKMIGHYIGMSFQIIDDVLD 226


>gi|70726445|ref|YP_253359.1| heptaprenyl diphosphate syntase component II [Staphylococcus
           haemolyticus JCSC1435]
 gi|68447169|dbj|BAE04753.1| heptaprenyl diphosphate syntase component II [Staphylococcus
           haemolyticus JCSC1435]
          Length = 318

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)

Query: 34  QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIH 89
           + ND +L      LL  GGK++R   V   +S F     T    RV  A+E IH  +L+H
Sbjct: 22  ESNDPILREASSHLLSSGGKRVRPAFVI-LSSQFGPQKKTEDTYRVAVALELIHMATLVH 80

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+ T+  ++D  TAI+ GN LL    E +S    +++DN    ++ +
Sbjct: 81  DDV--IDKSDKRRGRLTIVKKWDVTTAILTGNFLLALGLEHLS----EIRDNRIHHIISN 134

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
              N+GL     G++   QD+F  E   T        KT  L+  A E GAI + A+   
Sbjct: 135 SIVNVGL-----GELFQFQDQFNSEQSITNYLRRINRKTALLIQLATEVGAITSEANDET 189

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
             +L+  G  +G+ FQ+ DD+LD
Sbjct: 190 IRKLKMIGHYIGMSFQIVDDILD 212


>gi|255027667|ref|ZP_05299653.1| hypothetical protein LmonocytFSL_17247 [Listeria monocytogenes FSL
           J2-003]
          Length = 129

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  ++ Y++  GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MD
Sbjct: 31  RLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           N   RRGK T H  + + TAI+AG+ LLT AF I++
Sbjct: 91  NDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILA 126


>gi|325268320|ref|ZP_08134953.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608]
 gi|324989462|gb|EGC21412.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608]
          Length = 326

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK++R  L+   A  F       L     +E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  AGKRMRPILILLIAKNFGKVSEATLHAAVGLELLHTASLVHDDV--VDESAERRGQASVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
             YD   A++ G+ +L+ A   +S        +  S+ ++     +G Q +  G++L   
Sbjct: 102 ADYDNKVAVLVGDYVLSTALLYVS--------HTHSEAIVRRLAGLG-QTLSDGEILQLS 152

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +IQ + I E   + I + KT AL       GA+ A AS+ E +  RCFG+NLGI+FQ+ D
Sbjct: 153 NIQRKDITEEAYYRIIERKTAALFEACAAIGAVSAGASEEEVDAARCFGKNLGIVFQIRD 212

Query: 226 DLLD 229
           D+ D
Sbjct: 213 DIFD 216


>gi|99078713|ref|YP_611971.1| farnesyltranstransferase [Ruegeria sp. TM1040]
 gi|99035851|gb|ABF62709.1| Farnesyltranstransferase [Ruegeria sp. TM1040]
          Length = 336

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M +QH  R+     + +  GGK++R  L    A +        L++ A +E IH  +L+H
Sbjct: 36  MASQHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGEHHLKLAATVEFIHTATLLH 95

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 96  DDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVDTGSLRVLDILANASAT 153

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      M    D    E     + + KT AL   A E G ++A AS+ + + 
Sbjct: 154 IAEGEVLQ------MTAATDLGTTEEIYLQVVRGKTAALFSAATEVGGVIAGASEAQVKA 207

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           L  +G+ LGI FQ+ADDLLD + D  K
Sbjct: 208 LFDYGDALGIAFQIADDLLDYQGDTAK 234


>gi|304413337|ref|ZP_07394810.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola
           LSR1]
 gi|304284180|gb|EFL92573.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola
           LSR1]
          Length = 327

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 119/223 (53%), Gaps = 19/223 (8%)

Query: 18  TILDDLLLQTASHMQTQHND---------RLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +ILD++   TA  M T ++           L++ I + ++  GGK+IR  +    A    
Sbjct: 6   SILDEVKELTAKDMATVNDTIEEQMRSDVALITEISHYIINNGGKRIRPMIAILVAQALG 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + +   IE IH  +L+HDD+  +DN  +RRGK TV+ Q+    +++ G+ + T 
Sbjct: 66  YKGNQHITIAVLIEFIHTATLLHDDV--VDNSDLRRGKATVNAQFGNAASVLVGDFIYTR 123

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++    TQL  ++R   ++S   N+  +G +  Q+++ +D  I E     +   KT 
Sbjct: 124 AFQMM----TQL-GSMRVLEVMSTATNMIAKGEVQ-QLINCKDPRITEENYLSVIGSKTA 177

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            L   A +S AI+A A++ ++  L+ +G ++GI FQL DDLLD
Sbjct: 178 KLFEAASQSSAILAGANKEKELALQRYGHHIGIAFQLIDDLLD 220


>gi|148643503|ref|YP_001274016.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
           [Methanobrevibacter smithii ATCC 35061]
 gi|148552520|gb|ABQ87648.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
           [Methanobrevibacter smithii ATCC 35061]
          Length = 330

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 12/191 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    +     +   +L+  AAIE IH +SLIH     MD+  +RRGKP VH
Sbjct: 41  GGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDIMDDDDMRRGKPAVH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQML 165
             +DE  AI+AG+ L + AFEII  S P+     N  +QL  +L T       +  GQ  
Sbjct: 99  KVWDENVAILAGDTLFSKAFEIIMNSDPEK----NTPTQLSQTLATVADACVKICEGQAS 154

Query: 166 DI--QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  +D + + E +   +   KTGAL+  A ++GAIM  A+Q   + +  +G  +G+ FQ
Sbjct: 155 DMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQ 214

Query: 223 LADDLLDCEED 233
           + DD LD   D
Sbjct: 215 IQDDYLDLASD 225


>gi|170741854|ref|YP_001770509.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
 gi|168196128|gb|ACA18075.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
          Length = 290

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNV 67
           ++  RI+  LD       SH +      LL+ AIRYA+  GG +IR  L    A +  + 
Sbjct: 2   DDGGRIERALD----VAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVARACGDD 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   +    AAIE +HC SL+HDDLP  D+  +RR KP+VH+ + E  A++AG+ L+  A
Sbjct: 58  DPAASDAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIALLAGDALIVLA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           FE ++    ++ + + + + L         G++ GQ  + +        +   Q+ KTGA
Sbjct: 118 FETLARGAARVPERLGTLVGLVARAVGSPAGIVAGQAWESE----PSVGLSAYQQAKTGA 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L   A  +GA  A A        R  GE LG  +Q+ADDL D
Sbjct: 174 LFAAATVTGAAAAGAEAMP---WRLLGEYLGEAYQVADDLRD 212


>gi|288869706|ref|ZP_05975848.2| short chain isoprenyl diphosphate synthase [Methanobrevibacter
           smithii DSM 2374]
 gi|288861214|gb|EFC93512.1| short chain isoprenyl diphosphate synthase [Methanobrevibacter
           smithii DSM 2374]
          Length = 335

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 12/191 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    +     +   +L+  AAIE IH +SLIH     MD+  +RRGKP VH
Sbjct: 46  GGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDIMDDDDMRRGKPAVH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQML 165
             +DE  AI+AG+ L + AFEII  S P+     N  +QL  +L T       +  GQ  
Sbjct: 104 KVWDENVAILAGDTLFSKAFEIIMNSDPEK----NTPAQLSQTLATVADACVKICEGQAS 159

Query: 166 DI--QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  +D + + E +   +   KTGAL+  A ++GAIM  A+Q   + +  +G  +G+ FQ
Sbjct: 160 DMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQ 219

Query: 223 LADDLLDCEED 233
           + DD LD   D
Sbjct: 220 IQDDYLDLASD 230


>gi|222444999|ref|ZP_03607514.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434564|gb|EEE41729.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
           DSM 2375]
          Length = 335

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 12/191 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    +     +   +L+  AAIE IH +SLIH     MD+  +RRGKP VH
Sbjct: 46  GGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDIMDDDDMRRGKPAVH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQML 165
             +DE  AI+AG+ L + AFEII  S P+     N  +QL  +L T       +  GQ  
Sbjct: 104 KVWDENVAILAGDTLFSKAFEIIMNSDPEK----NTPTQLSQTLATVADACVKICEGQAS 159

Query: 166 DI--QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  +D + + E +   +   KTGAL+  A ++GAIM  A+Q   + +  +G  +G+ FQ
Sbjct: 160 DMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMYDYGRLIGLAFQ 219

Query: 223 LADDLLDCEED 233
           + DD LD   D
Sbjct: 220 IQDDYLDLASD 230


>gi|86157523|ref|YP_464308.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774034|gb|ABC80871.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 293

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 108/203 (53%), Gaps = 17/203 (8%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93
           RL+ A RYALLGG K++R  LV            +   A+R   A+E IH YSL+HDDLP
Sbjct: 36  RLVEATRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+PTVH  +DE TA++ G+GL + AF  +++SP     D   + L   L  
Sbjct: 96  AMDDDDLRRGRPTVHRAFDEATAVLVGDGLQSLAFAHLLASP-----DPAAAPLARLLAE 150

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           N  L  M+ GQ  D+  E   + E +V  + + KT         + A  A  +    E +
Sbjct: 151 NAQL--MVEGQARDMAGEHARLGEAEVMELMRTKT---GALLAAAVAGGARCAGASAEAV 205

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
              G  LG+ FQ+ADDLLD   D
Sbjct: 206 YPVGLKLGLAFQIADDLLDLTAD 228


>gi|309320748|pdb|3P41|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
           Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
           And Isoprenyl Pyrophosphate
          Length = 303

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A RY++  GGK++R  L              A     A+E IH YSL+HDDLP+ D
Sbjct: 38  RLYEAXRYSVXNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAXD 97

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIG 155
           +  +RRG+PT H  +DE  AI+AG+GL + AF  +  P  +     IR + + +L    G
Sbjct: 98  DDDLRRGQPTTHKAFDEAXAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTLAQAAG 157

Query: 156 LQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRC 212
             G +GGQ +D+      +D+  +    + KTGAL+  +   GA+ +  A + E + L+ 
Sbjct: 158 PAGXVGGQAIDLGSVGLKLDQQALEYXHRHKTGALIEASVILGALASGRAEKGELKALQT 217

Query: 213 FGENLGIIFQLADDLLDCEED 233
           + + +G+ FQ+ DD+LD E D
Sbjct: 218 YAQAIGLAFQVQDDILDVESD 238


>gi|55377016|ref|YP_134866.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC
           43049]
 gi|55229741|gb|AAV45160.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC
           43049]
          Length = 346

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 26/219 (11%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNVNHLTA---------------L 73
           +  Q  D L  A RY L  GGK++R + L+    SL +V+ LTA               +
Sbjct: 27  LPVQKPDHLYEASRYLLDAGGKRLRPTVLLLVAESLLDVDPLTADYRDFPTLEGGQADMM 86

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               AIE I  ++LIHDD+  MD+  +RRG P VH +YD  TAI+AG+ L + AFE +  
Sbjct: 87  SAALAIEVIQTFTLIHDDI--MDDDALRRGVPAVHKEYDLSTAILAGDTLYSKAFEFLLE 144

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC 190
                +  + +   L+ T       +  GQ LDI   Q + +   +   + ++KT  L  
Sbjct: 145 TGAAHERTVDANKRLATT----CTRICEGQSLDIEFEQRDVVTPEEYLEMVELKTAVLYG 200

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A    A +  A +   + L  +G ++G  FQ+ DDLLD
Sbjct: 201 AAASIPATLLGADEQTVDALYNYGLDVGRAFQIQDDLLD 239


>gi|319784751|ref|YP_004144227.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170639|gb|ADV14177.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 338

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 22/240 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHM---------QTQHNDRLLSAIRYALL--GGKKIRSFLVT 59
           EN KR    + DL+  TA+ M         +   +  ++  +   L+  GGK++R  L  
Sbjct: 8   ENGKREPASIKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTL 67

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +F       +++  ++E +H  +L+HDD+  +D   +RRGK T  + +    +++ 
Sbjct: 68  AAAQMFGYAGEGHVKLATSVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLV 125

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  AF ++    +     + +  +LS   +I  +G +  Q+   ++    E + F 
Sbjct: 126 GDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAKNLETTEDEHFA 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           + K KT AL   A E G ++A A++N++  LR +G NLG+ FQL DD LD     +DL K
Sbjct: 180 VIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239


>gi|284162554|ref|YP_003401177.1| polyprenyl synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012551|gb|ADB58504.1| Polyprenyl synthetase [Archaeoglobus profundus DSM 5631]
          Length = 293

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 16/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V   A L   ++   + +  A+E IH  SL+HDD+  +D G +RR    +H
Sbjct: 39  GGKRTRPLIVLLSAKLCGGDYKDVMDMALAVELIHTASLVHDDI--IDRGVMRRNVKALH 96

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           ++YD   AI+ G+ L++ + E++S  P   +K+  ++ +M+S            G++LD+
Sbjct: 97  VEYDISLAILVGDWLISKSVELVSKYPSQIIKEFAKTGMMMS-----------EGEVLDV 145

Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              +    E   F     KT +L  +  ++ A++    +   E++  +G NLGI +QL D
Sbjct: 146 YSPYERFTEDTYFKCITFKTASLFAYGAKNSAMVVCDDEKAWEKMFEYGLNLGIAYQLVD 205

Query: 226 DLLD 229
           DLL+
Sbjct: 206 DLLE 209


>gi|255011168|ref|ZP_05283294.1| putative isoprenoid biosynthesis related protein [Bacteroides
           fragilis 3_1_12]
          Length = 276

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 11/161 (6%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIE  H Y+L+HDDL  MD   +RRGK TVH  +++ TAI++G+ ++  A++ ++S  
Sbjct: 17  ATAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCS 74

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFA 192
           ++    +    + SLT    L+   G QM    + +D+  +E  + MI ++KT  L+  +
Sbjct: 75  SEYLKEVMD--LFSLT---ALEICEGQQMDMGFESRDDVKEEEYLEMI-RLKTAVLLAAS 128

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GAI+  AS+ + E L  FG  +G+ FQL DDLLD   D
Sbjct: 129 LKIGAILGGASREDAENLYDFGMQIGVAFQLQDDLLDVYGD 169


>gi|110633068|ref|YP_673276.1| polyprenyl synthetase [Mesorhizobium sp. BNC1]
 gi|110284052|gb|ABG62111.1| Polyprenyl synthetase [Chelativorans sp. BNC1]
          Length = 338

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F  +    +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMITLAAAQMFGYSGEGHVKLATSVEFMHTATLLHDDV--VDESDMRRGKKTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     +Q  +   +   +
Sbjct: 115 TIWGNQASVLVGDYLLGQAFRMMVDVGSLEALDVLSSAASIIAEGEVMQLGVSKNLETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + K KT AL   A E G I+A AS+N++  LR FG NLG+ FQL DD L
Sbjct: 175 DEYLS------VIKAKTAALFSAAAEVGPIIAEASRNDRAALRSFGINLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|317493609|ref|ZP_07952030.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918552|gb|EFV39890.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 323

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLSARALNYTGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTSLQS-----LRVLELMSEATNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI+A A+  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPNITEENYMRVIYSKTARLFEAAAQSSAILAGATHEQEIALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|86139019|ref|ZP_01057590.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193]
 gi|85824250|gb|EAQ44454.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193]
          Length = 332

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 13/212 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L+QT   M ++H  R+     + +  GGK++R  L    A L        +++ A +E I
Sbjct: 27  LIQT--RMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAARLCGYEGAHHVKLAATVEFI 84

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDN 141
           H  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L + +F++ + +   Q+ D 
Sbjct: 85  HTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLQVLD- 141

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
               ++ + +  I    +L  QM    +   DE     + + KT AL   A + G ++A 
Sbjct: 142 ----ILANASATIAEGEVL--QMTAASNLATDEAVYLQVVRGKTAALFSAATQVGGVIAA 195

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A + + + L  +G+ LGI FQ+ADDLLD + D
Sbjct: 196 APETQIKGLFDYGDALGIAFQIADDLLDYQGD 227


>gi|110636883|ref|YP_677090.1| geranyltranstransferase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279564|gb|ABG57750.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 325

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 12/199 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   IRY + LGGK++R  L      +F  +    +    A+E  H ++L+HDD+  MDN
Sbjct: 28  LYEPIRYIMDLGGKRMRPLLTILSNYIFTEDTNNVMNAAIAVEVFHNFTLMHDDI--MDN 85

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGK TVH +++   AI++G+ +L  A++ + +   +    +  +       N    
Sbjct: 86  APLRRGKATVHAKWNTNIAILSGDVMLVEAYKQLMTIDEKYLKQVLDRF------NETAA 139

Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G+  GQ  D+  E +    V     + ++KT  L+ F+ E G I+  A +     L   G
Sbjct: 140 GVCEGQQFDMNFESLPTISVDDYINMIRLKTAVLLGFSMELGGILGDADEKSCTYLNTVG 199

Query: 215 ENLGIIFQLADDLLDCEED 233
            + GI FQL DDLLD   D
Sbjct: 200 ISAGIGFQLKDDLLDVYGD 218


>gi|269467946|gb|EEZ79681.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster
           bacterium]
          Length = 288

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 121/221 (54%), Gaps = 16/221 (7%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           ++RI+  LD+ L+   S         L  ++RY++L GGK+ R  L    A+ F+ +   
Sbjct: 11  TERINKKLDECLISQGS---------LTKSMRYSVLSGGKRFRPILTYAVANTFSTDLNR 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A     A+E IH YSLIHDDLP+MD+   R  +P  H ++ E  AI+ G+GL   AFE +
Sbjct: 62  ADSSACAVELIHAYSLIHDDLPAMDDDDTRHNQPACHRKFGEAQAILTGDGLQALAFETL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALM 189
            +    +   +R +L+ +LTH      M  GQ +D+    + ID   +  + + KTGAL+
Sbjct: 122 VNDHN-ISSEMRIKLLQALTH--ASFEMAEGQSIDLSVVSQVIDIKTLKNMHRKKTGALL 178

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229
             + + GA+++   ++ + E L  F  ++G+ +Q+ DD+LD
Sbjct: 179 NCSIKLGALLSDQCNKKDFEILDDFSADIGLAYQIQDDVLD 219


>gi|220916330|ref|YP_002491634.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954184|gb|ACL64568.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 293

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 108/203 (53%), Gaps = 17/203 (8%)

Query: 38  RLLSAIRYALLGG-KKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93
           RL+ A+RYALLGG K++R  LV            +   A+R   A+E IH YSL+HDDLP
Sbjct: 36  RLVEAMRYALLGGGKRMRPALVLAACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLP 95

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG+PTVH  YDE TA++ G+GL + AF  +++SP     D   + L   L  
Sbjct: 96  AMDDDDLRRGRPTVHKAYDEPTAVLVGDGLQSLAFAHLLASP-----DPAAAPLARLLAE 150

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           N  L  M+ GQ  D+  E   + E +V  + + KT         + A  A  +    E  
Sbjct: 151 NAQL--MVEGQARDMAGEHARLGEAEVMELMRTKT---GALLAAAVAGGARCAGVPVEAA 205

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
              G  LG+ FQ+ADDLLD   D
Sbjct: 206 YPVGLKLGLAFQIADDLLDLTAD 228


>gi|258544867|ref|ZP_05705101.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC
           15826]
 gi|258519890|gb|EEV88749.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC
           15826]
          Length = 326

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  L      L +     A+   A IE IH  +L+HDD+  +D   +RRGKP+ +
Sbjct: 47  GGKRFRPLLTLLSCGLCDYRGEHAITAAAFIEFIHNATLLHDDV--VDESALRRGKPSAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L T AF+++         N     M++   N+   G +  Q+ ++ 
Sbjct: 105 IAFGNAASVLVGDFLYTRAFQLMVR-----TGNSAVIAMMADAVNLIAAGEVM-QLGNMH 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE + + + ++KT  L   AC++  ++A   +   E+L  +G  LG+ FQ+ DDLL
Sbjct: 159 DPDVDEPRYYRVIELKTAVLFAAACKTAGLLAGLPEARSEQLAVYGRKLGMAFQIMDDLL 218

Query: 229 DCEED 233
           D   D
Sbjct: 219 DYTGD 223


>gi|163852146|ref|YP_001640189.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
 gi|163663751|gb|ABY31118.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
          Length = 288

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 112/221 (50%), Gaps = 18/221 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70
           +RI+T+LD+ +    SH +      LL+ AIRYA+  GG +IR  L    A +  + +  
Sbjct: 5   RRIETVLDNAV----SHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDDPA 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +    AAIE +HC SL+HDDLP  D+   RR KP+VH  +    A++ G+ L+  AFE 
Sbjct: 61  ASEAAAAAIELLHCASLVHDDLPCFDDAPTRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           ++  +  ++   R   ++ L         G++ GQ  +  + ++D  +    Q+ KTGAL
Sbjct: 121 LA--RGVIRSPARLAGLVGLIARAAGSPSGIVAGQAWE-SEPYVDLVE---YQQAKTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                 +    A A+       R  GE LG  +Q+ADDL D
Sbjct: 175 F---AAATVAGAGAAGAPPLPWRLLGECLGAAYQVADDLRD 212


>gi|13476175|ref|NP_107745.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099]
 gi|14026935|dbj|BAB53531.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099]
          Length = 338

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 22/240 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHM---------QTQHNDRLLSAIRYALL--GGKKIRSFLVT 59
           EN KR    + DL+  TA+ M         +   +  ++  +   L+  GGK++R  L  
Sbjct: 8   ENGKREPASIKDLIDLTAADMGRVNELILSKAGSDVEMIPEVANHLISSGGKRLRPMLTL 67

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +F       +++  ++E +H  +L+HDD+  +D   +RRGK T  + +    +++ 
Sbjct: 68  AAAQMFGYAGEGHVKLATSVEFMHTATLLHDDV--VDESGMRRGKKTARMIWGNQASVLV 125

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  AF ++    +     + +  +LS   +I  +G +  Q+   ++    E + F 
Sbjct: 126 GDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAKNLETTEDEHFA 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           + K KT AL   A E G ++A A++N++  LR +G NLG+ FQL DD LD     +DL K
Sbjct: 180 VIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDALDYGGTSKDLGK 239


>gi|67003501|dbj|BAD99412.1| GGPP synthase [Brevundimonas sp. SD212]
          Length = 298

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 4/183 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  +    A+        AL  G A+E  H  SL+ DDLP MD+  +RRG+PT+H 
Sbjct: 53  GKRVRPVVAMLAAAHVGGRAEDALDFGCAVEMAHAASLVLDDLPCMDDAALRRGQPTLHR 112

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++ E  A++A   LL  +  +I   +++     R   +  LT  IG  G+  GQM D++D
Sbjct: 113 RHGEDAAVLAAVALLNQSTRLIL--QSRAPSEARLGALDDLTQAIGFDGLAEGQMRDLRD 170

Query: 170 EFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           + +    V +  I  +KTGAL   A   G  M     ++  RL  FGE +G  FQL DDL
Sbjct: 171 DPVQRDVVALRRINDLKTGALFVAAARGGGRMGGGDADDLARLAAFGEAVGFAFQLCDDL 230

Query: 228 LDC 230
           +D 
Sbjct: 231 MDA 233


>gi|157368719|ref|YP_001476708.1| octaprenyl diphosphate synthase [Serratia proteamaculans 568]
 gi|157320483|gb|ABV39580.1| Polyprenyl synthetase [Serratia proteamaculans 568]
          Length = 323

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI++ AS  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILSDASVAEEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|315654711|ref|ZP_07907617.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333]
 gi|315491175|gb|EFU80794.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333]
          Length = 350

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 22/220 (10%)

Query: 20  LDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-- 75
           LDD+  +L   +  Q +    L+S +R A  GGK++R  L    + L   +   + +V  
Sbjct: 32  LDDIEQMLVQETQTQREKTSALVSHLRAA--GGKRMRPLLTLLVSQLGAPDQPVSSQVKQ 89

Query: 76  -GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E  H  SL HDDL  MD   +RRG P  H+Q++   A++AG+ + + A  ++S  
Sbjct: 90  GAVAVELTHLASLYHDDL--MDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRASLLVSG- 146

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM-IQKMKTGALMCF 191
              L   I +Q      H+   + +  GQM DI   D   D  + ++ + + KTGAL+  
Sbjct: 147 ---LNPTIVAQ------HSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGALIGC 197

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   GA ++         +  FGE+LG+ FQ+ADD+LD +
Sbjct: 198 AALYGAELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQ 237


>gi|288563197|pdb|3LJI|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From
           Pseudomonas Fluorescens Pf-5
 gi|290560563|pdb|3LSN|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From
           Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
          Length = 304

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 5/201 (2%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL  A RY++  GGK++R  L              A     A+E IH YSL+HDDLP+ D
Sbjct: 31  RLYEAXRYSVXNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAXD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIG 155
           +  +RRG+PT H  +DE  AI+AG+GL + AF  +  P  +     IR + + +L    G
Sbjct: 91  DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRXVTTLAQAAG 150

Query: 156 LQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRC 212
             G +GGQ +D+      +D+  +    + KTGAL+  +   GA+ +  A + E + L+ 
Sbjct: 151 PAGXVGGQAIDLGSVGLKLDQQALEYXHRHKTGALIEASVILGALASGRAEKGELKALQT 210

Query: 213 FGENLGIIFQLADDLLDCEED 233
           + + +G+ FQ+ DD+LD E D
Sbjct: 211 YAQAIGLAFQVQDDILDVESD 231


>gi|322387923|ref|ZP_08061530.1| geranyltranstransferase [Streptococcus infantis ATCC 700779]
 gi|321141196|gb|EFX36694.1| geranyltranstransferase [Streptococcus infantis ATCC 700779]
          Length = 291

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 11/211 (5%)

Query: 29  SHMQTQHNDRLLSA-IRYALL-----GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIEC 81
           S ++  + D+ L+A +R A+L     GGK+IR +L+ E      V    A  +V AA+E 
Sbjct: 12  SALEEFYGDQQLAANLREAVLYSIHAGGKRIRPYLLLEVLESLQVPITIAHAQVAAALEM 71

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDDLP+MD+   RRG  T H ++ E  AI+AG+ L    + +I+  +  L + 
Sbjct: 72  IHTGSLIHDDLPAMDDDDFRRGSLTNHKKFGEALAILAGDALFLDPYALIA--QANLPNE 129

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIM 199
           I+  L+ SL+ + G  GM+ GQ+LD++ E   ++  ++  I   KTG L+ F  ++  ++
Sbjct: 130 IKVDLIASLSLSSGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKTGKLLAFPFQAAGVI 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A   +N + +L+  GE +G+ FQ+ DD+LD 
Sbjct: 190 AELDENLQIQLKTVGELIGLAFQVRDDILDV 220


>gi|241888826|ref|ZP_04776132.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans
           ATCC 10379]
 gi|241864502|gb|EER68878.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans
           ATCC 10379]
          Length = 315

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 24/207 (11%)

Query: 33  TQHNDRLLSAI--RYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLI 88
           T+ ND  L  I  +Y L GGK++R  L+  CA L  F +N    +R+ + +E IH  SLI
Sbjct: 20  TRSNDEQLDEIVKKYFLNGGKRVRVLLLLMCAKLGNFELNKKDIIRMASIVEIIHTASLI 79

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +DN   RRG  T++ +Y    A+  G+    Y F ++     +  DN +  L L
Sbjct: 80  HDDI--IDNADTRRGSVTMNKEYSNEFALRVGD----YLFSVVLKEVAKF-DNEKIHLYL 132

Query: 149 SLTHNIGLQGMLGGQML------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           + T    L+ +  G+++      DI+   +D  +     K KT  L+ FAC +G+I+A A
Sbjct: 133 AET----LKELCIGELIQADGLYDIKTRRLDYLKKI---KRKTAILIAFACVAGSIVADA 185

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229
           S  +      +G  LG+ +Q+ DD LD
Sbjct: 186 SDEDIRSAFSYGYYLGMSYQIIDDYLD 212


>gi|31621279|gb|AAP59037.1| CrtE [Thiocapsa roseopersicina]
          Length = 288

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 11/195 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95
           RL  A+R+A+  GG ++R  L    A+      + A    GA+IE +HC SL+HDDLP  
Sbjct: 26  RLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDVEAADAAGASIELLHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG P+VH  Y E  A++AG+ L+  AFE ++       + + + L+++++  +G
Sbjct: 86  DDSPLRRGLPSVHRAYGEPLAVLAGDALIVLAFENLARVLGNSPERL-APLLMTVSRAVG 144

Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  G++ GQ  + + +      V    + KT         + A  A  +  + +  R  G
Sbjct: 145 MPSGIVAGQAWECEPKV----SVADYHRAKT---GALFAAATAAGAQVAGADADAWRVVG 197

Query: 215 ENLGIIFQLADDLLD 229
           + +G  +Q+ADDL D
Sbjct: 198 DKIGEAYQVADDLRD 212


>gi|311693395|gb|ADP96268.1| trans-hexaprenyltranstransferase [marine bacterium HP15]
          Length = 322

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 102/185 (55%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +          L++ A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLSSQAAGYEENDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ L   AFE++   K+     +R   +LS    +  +G +  Q+++++
Sbjct: 101 ARWGNAPSVLVGDFLYARAFEMMVELKS-----LRIMDVLSHATAVIAEGEVM-QLMNVK 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E Q   +   KT  L   A  +GA++AHAS  ++  L+ +G++LG+ FQL DD+L
Sbjct: 155 NPDLTEEQYMKVIHNKTAMLFEAASHTGALLAHASAEQELGLKDYGKHLGLAFQLVDDVL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYQGD 219


>gi|320106552|ref|YP_004182142.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
 gi|319925073|gb|ADV82148.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
          Length = 329

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 116/220 (52%), Gaps = 18/220 (8%)

Query: 16  IDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72
            D + DDL  ++     Q+    R+++ I   LL  GGK+IR  L+   A   +    + 
Sbjct: 13  FDLLRDDLAAVEREFARQSSSEVRVITEIAEYLLAGGGKRIRPLLLLLSAKALHFRGESR 72

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R+GA +E +H  +L+HDD+  +D    RRG+P+ +  +     ++AG+ L   +F++  
Sbjct: 73  IRLGAVVEMLHTATLVHDDI--IDAADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFQVAM 130

Query: 133 SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189
             +   + D     L++SLT     Q M+ G++L IQ     I+E + F +   KT +L 
Sbjct: 131 EERNFHVLD-----LLISLT-----QQMVEGELLQIQKLGRLINEEEYFDLIFRKTASLF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             + + GA +A A +  + +L  +G NLG+ FQ+ DD+LD
Sbjct: 181 RVSMQLGAAIADAPKEIEGQLGEYGRNLGLAFQIVDDVLD 220


>gi|322392008|ref|ZP_08065471.1| geranyltranstransferase [Streptococcus peroris ATCC 700780]
 gi|321145106|gb|EFX40504.1| geranyltranstransferase [Streptococcus peroris ATCC 700780]
          Length = 291

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 118/201 (58%), Gaps = 6/201 (2%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91
           Q +  L  A+ Y++  GGK+IR +L+ E      V    A  +V AA+E IH  SLIHDD
Sbjct: 22  QVSSSLREAVLYSVHAGGKRIRPYLLLEVLESLQVPITIAHAQVAAALEMIHTGSLIHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+   RRG+ T H ++ E  AI+AG+ L    + +I+  +  L + I+  L+ SL+
Sbjct: 82  LPAMDDDDFRRGRLTNHKKFGEALAILAGDALFFDPYALIA--QADLPNEIKIDLIASLS 139

Query: 152 HNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            + G  GM+ GQ+LD++ E   ++  ++  I   KTG L+ +  ++ AI+A  +   + +
Sbjct: 140 LSSGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKTGKLLAYPFQAAAIIAELTPELQAK 199

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L+  GE +G+ FQ+ DD+LD 
Sbjct: 200 LKTVGELVGLAFQVRDDVLDV 220


>gi|327398180|ref|YP_004339049.1| polyprenyl synthetase [Hippea maritima DSM 10411]
 gi|327180809|gb|AEA32990.1| Polyprenyl synthetase [Hippea maritima DSM 10411]
          Length = 316

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 20/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK++R  LV   AS   ++    AL VG+A+E IH  SL+HDD+  +D+   RRGKP  H
Sbjct: 42  GKRLRPLLVLYSASALGIDEPKDALVVGSAVELIHTASLLHDDI--IDDALYRRGKPASH 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDI 167
             Y    A++ G+ L + A+ I+      +   I R+  +LS            G++ +I
Sbjct: 100 TVYGIKPAVMGGDYLYSLAYNIVLDYDVDVAKAISRAAYILS-----------EGEIEEI 148

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  F   I     + +   KT  L+  +CESGAI+A+  +      + +G+NLG+ FQ+ 
Sbjct: 149 EQAFKVNIGFDDYYRVIYKKTAVLIEASCESGAILAN--KQFSPVFKEYGKNLGLAFQIK 206

Query: 225 DDLLDCEED 233
           DD LD + D
Sbjct: 207 DDCLDYQAD 215


>gi|116753785|ref|YP_842903.1| farnesyltranstransferase [Methanosaeta thermophila PT]
 gi|116665236|gb|ABK14263.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Methanosaeta thermophila PT]
          Length = 327

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 17/232 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
            G L ++L+  +  I   +D+LL            + L  A R+ L  GGK++R  L+  
Sbjct: 6   GGDLEAELRRRADLISKAIDELL-------PVSRPEGLYDAARHLLGAGGKRLRPSLLLI 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                  +    +    AIE +H ++LIHDD+  MDN  +RRGKP VH+ +    AI+AG
Sbjct: 59  AGESVGCDAARLVPAAVAIELVHNFTLIHDDI--MDNASLRRGKPAVHVIWGTSGAILAG 116

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           + L + AFE++S      +  + +  ML+ T       +  GQ  D++    E + E + 
Sbjct: 117 DTLYSKAFEMLSMVDAPPERVLAAMDMLARTCT----SICEGQWQDLEFERAESVTEKEY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             + + KTG L   +   GA +  A       L  FG   G+ FQ+ DD+LD
Sbjct: 173 LEMIEKKTGVLYGASAWIGATLGGAPPEVAGGLEEFGRLTGMGFQIHDDILD 224


>gi|307330864|ref|ZP_07609998.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
           4113]
 gi|306883489|gb|EFN14541.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
           4113]
          Length = 329

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 21/187 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   + +   A+R     E +H  SL HDD+  MD    RRG P+V+
Sbjct: 48  GGKRLRPLLALVGAEFGDRDPSAAVRAATLAELVHVASLYHDDV--MDQARTRRGVPSVN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            ++   TA++AGN LL+ A ++ +   P+  +L+  + ++L++             GQ+ 
Sbjct: 106 ARWGNTTAVLAGNWLLSKAAQLAAELGPEAIRLQSKVTNRLIM-------------GQIR 152

Query: 166 DIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           ++     D+   +  F +   K+ +L+  A + GA+   A +   + L  +GE+LGI FQ
Sbjct: 153 ELVGPSDDDDPLSHYFTVVAGKSASLIAMALQLGAVRTGAPEPAVQALAEYGEHLGIAFQ 212

Query: 223 LADDLLD 229
           ++DD+LD
Sbjct: 213 ISDDILD 219


>gi|83941379|ref|ZP_00953841.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
 gi|83847199|gb|EAP85074.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
          Length = 332

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 12/217 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           T ++DL+      M ++H  R+     + +  GGK++R  L    A L   +    + + 
Sbjct: 22  TAVNDLIR---DRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLA 78

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++    
Sbjct: 79  ATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTE--- 133

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
              +N+R   +L+       +G +  Q+   Q+   DE     + + KT AL   A + G
Sbjct: 134 --TNNMRVLAILANASATIAEGEVL-QLTAAQNLATDEGIYLQVVRGKTAALFSAATQVG 190

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++A A   + + L  +G+ LGI FQ+ DDLLD + D
Sbjct: 191 GVIATAPDAQVQALYDYGDALGIAFQIVDDLLDYQGD 227


>gi|260576245|ref|ZP_05844237.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
 gi|259021513|gb|EEW24817.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
          Length = 333

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 11/201 (5%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 33  MASEHAPRIPQVTAHLVEAGGKRLRPLLTLAAARLCGYGGPFHVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLML 148
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++  P      N+R   ++ 
Sbjct: 93  DDV--VDESSRRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVEPG-----NLRVLDILA 145

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           + + +I    +L  Q+   QD    E     + + KT AL   A E G ++A A  ++ +
Sbjct: 146 NASASIAEGEVL--QLTAAQDLATTEAIYLQVVRGKTAALFSAATEVGGVIAGAPADQVK 203

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  +G+ LG+ FQ+ DDLLD
Sbjct: 204 ALFTYGDALGVAFQIVDDLLD 224


>gi|14625000|dbj|BAB61880.1| farnesyl diphosphate synthase [Rhodobacter azotoformans]
          Length = 137

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 8/130 (6%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH ++DE TA++AG+ L T AFE+++ P       +R +L+ +L    G +GM
Sbjct: 12  LRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAEVRIRLVETLARASGAEGM 70

Query: 160 LGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LDI  E     +   Q+  +Q  KTGAL+ ++ E+GAI+  A       LR +  
Sbjct: 71  VLGQALDIAAETAAVPLTLEQITHLQAGKTGALIRWSAEAGAILGQADTGP---LRRYAT 127

Query: 216 NLGIIFQLAD 225
            LG+ FQ+AD
Sbjct: 128 ALGLAFQVAD 137


>gi|15602211|ref|NP_245283.1| IspB [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12720590|gb|AAK02430.1| IspB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 330

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     +    +     IE IH  +L+HDD+  +D   +RRG PT +
Sbjct: 50  GGKRIRPMIAILAARALGFHGEQPITCATFIEFIHTATLLHDDV--VDESALRRGNPTAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF+++    TQL D++R   ++S   N+  +G +  Q++++ 
Sbjct: 108 AEFGNAASVLVGDFIYTRAFQLM----TQL-DSLRILKVMSDATNVIAEGEVQ-QLMNVN 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    AI+AHA++ ++  LR +G  LG  FQL DD+L
Sbjct: 162 DPNTTEENYMQVIYGKTARLFEAATHCAAILAHATEAQENALREYGCYLGTAFQLVDDIL 221

Query: 229 DCEED 233
           D   D
Sbjct: 222 DYSAD 226


>gi|126666697|ref|ZP_01737674.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
 gi|126628742|gb|EAZ99362.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
          Length = 322

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 12/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +     N    L++ A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLASRATGYNEDNHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLD 166
            ++    +++ G+ L   AFE++   ++         +M  L+H   +  +G +  Q+++
Sbjct: 101 AKWGNAPSVLVGDFLYARAFEMMVELESL-------PIMKVLSHATAVIAEGEVM-QLMN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +++  + E Q   +   KT  L   +  SGA++A A+  ++E L+ +G++LG+ FQL DD
Sbjct: 153 VKNPDLTENQYMQVIHNKTAMLFEASSHSGALLAGANHAQEEALKNYGKHLGLAFQLVDD 212

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 213 VLDYRGD 219


>gi|241761105|ref|ZP_04759194.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241374724|gb|EER64185.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 337

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+  C+ L         ++ AAIE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 56  GGKRMRPMLMLACSRLIGEPRDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTAN 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ LL+ AFE++    +     +R+  +LS    I  QG +   +   Q
Sbjct: 114 NIWGNGPTVLVGDFLLSRAFEMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQ 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E  DE +   I   KT  L   +C   A+MA  S+++++ L  +G+ LGI FQL DD +
Sbjct: 169 VE-TDEARYLSIIGAKTAVLFAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAI 227

Query: 229 DCEED 233
           D   D
Sbjct: 228 DYMSD 232


>gi|56551460|ref|YP_162299.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543034|gb|AAV89188.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 337

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+  C+ L         ++ AAIE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 56  GGKRMRPMLMLACSRLIGEPRDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTAN 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ LL+ AFE++    +     +R+  +LS    I  QG +   +   Q
Sbjct: 114 NIWGNGPTVLVGDFLLSRAFEMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQ 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E  DE +   I   KT  L   +C   A+MA  S+++++ L  +G+ LGI FQL DD +
Sbjct: 169 VE-TDEARYLSIIGAKTAVLFAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAI 227

Query: 229 DCEED 233
           D   D
Sbjct: 228 DYMSD 232


>gi|260752929|ref|YP_003225822.1| trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552292|gb|ACV75238.1| Trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 337

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+  C+ L         ++ AAIE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 56  GGKRMRPMLMLACSRLIGEPRDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTAN 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ LL+ AFE++    +     +R+  +LS    I  QG +   +   Q
Sbjct: 114 NIWGNGPTVLVGDFLLSRAFEMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQ 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E  DE +   I   KT  L   +C   A+MA  S+++++ L  +G+ LGI FQL DD +
Sbjct: 169 VE-TDEARYLSIIGAKTAVLFAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAI 227

Query: 229 DCEED 233
           D   D
Sbjct: 228 DYMSD 232


>gi|20429105|emb|CAD24417.1| decaprenyl diphosphate synthase [Paracoccus zeaxanthinifaciens]
          Length = 333

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 9/201 (4%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+
Sbjct: 32  RMASRHAPRIPEVTAHLIEAGGKRLRPMLTLAAAKLLGYGGPYHVHLAATVEFIHTATLL 91

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++  P +     I S    
Sbjct: 92  HDDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVEPGSMRTLEILSNAAA 149

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           ++     LQ      +   QD   +E     + + KT AL   A E G ++A     +  
Sbjct: 150 TIAEGEVLQ------LTAAQDLATNEDIYLQVVRGKTAALFSAATEVGGVIAGVPDAQVR 203

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  +G+ LGI FQ+ DDLLD
Sbjct: 204 ALFDYGDALGIAFQIVDDLLD 224


>gi|77464324|ref|YP_353828.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase
           [Rhodobacter sphaeroides 2.4.1]
 gi|57115620|gb|AAW33555.1| decaprenyl diphosphate synthase [Rhodobacter sphaeroides]
 gi|77388742|gb|ABA79927.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Rhodobacter sphaeroides 2.4.1]
          Length = 333

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 33  MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D  + RRGKPT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 93  DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           ++    LQ      +   QD    E     + + KT AL   A E G ++A   + + E 
Sbjct: 151 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEAQVEA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LHAYGDALGIAFQIVDDLLD 224


>gi|121534144|ref|ZP_01665969.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1]
 gi|121307247|gb|EAX48164.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1]
          Length = 322

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA    V   + L +  AIE IH  +L+HDD+  +DN   RRG PT +
Sbjct: 43  GGKRLRPALYLLCAKSRQVETASLLPIAVAIEMIHMATLVHDDV--IDNAATRRGLPTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    ++++G+ L   AF  ++   T     I + ++ S         M  G++L I+
Sbjct: 101 SRWGNHVSVLSGDFLFAKAFSTVAKHATPAMLRILTDVVCS---------MCEGEILQIR 151

Query: 169 DEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           D F     +E  +  I K KT   +  +CE G + A  + +E   LR +G  +G+ FQ+ 
Sbjct: 152 DTFSAEQSEEDYLVRIAK-KTADFIAASCELGGLSAGLAPDEVAALRRYGHAVGMAFQIT 210

Query: 225 DDLLD 229
           DD+LD
Sbjct: 211 DDILD 215


>gi|291465068|gb|ADE06004.1| polyprenyl synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 333

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 33  MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D  + RRGKPT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 93  DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           ++    LQ      +   QD    E     + + KT AL   A E G ++A   + + E 
Sbjct: 151 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEAQVEA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LHAYGDALGIAFQIVDDLLD 224


>gi|126463166|ref|YP_001044280.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559215|ref|ZP_08413537.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N]
 gi|126104830|gb|ABN77508.1| Trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC
           17029]
 gi|332276927|gb|EGJ22242.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N]
          Length = 333

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 33  MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D  + RRGKPT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 93  DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           ++    LQ      +   QD    E     + + KT AL   A E G ++A   + + E 
Sbjct: 151 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEAQVEA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LHAYGDALGIAFQIVDDLLD 224


>gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
 gi|56676971|gb|AAV93637.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
          Length = 332

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 9/206 (4%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + M ++H  R+     + +  GGK++R  L    A L        +++ A +E IH  +L
Sbjct: 30  TRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYQGEDHVKLAATVEFIHTATL 89

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I +   
Sbjct: 90  LHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDILANAA 147

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            ++     LQ      M    D   DE+    + + KT AL   A E G ++A   + + 
Sbjct: 148 ATIAEGEVLQ------MTAASDLRTDESVYLQVVRGKTAALFSAATEVGGVIAGVPEAQV 201

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +G+ LGI FQ+ADDLLD + D
Sbjct: 202 RALFEYGDALGIAFQIADDLLDYQGD 227


>gi|83854856|ref|ZP_00948386.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
 gi|83842699|gb|EAP81866.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
          Length = 332

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 12/217 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           T ++DL+      M ++H  R+     + +  GGK++R  L    A L   +    + + 
Sbjct: 22  TAVNDLIR---DRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLA 78

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++    
Sbjct: 79  ATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTE--- 133

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
              +N+R   +L+       +G +  Q+   Q+   DE     + + KT AL   A + G
Sbjct: 134 --TNNMRVLAILANASATIAEGEVL-QLTAAQNLATDEGIYLQVVRGKTAALFSAATQVG 190

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++A A   + + L  +G+ LGI FQ+ DDLLD + D
Sbjct: 191 GVIAAAPDAQVQALFDYGDALGIAFQIVDDLLDYQGD 227


>gi|238750110|ref|ZP_04611613.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380]
 gi|238711654|gb|EEQ03869.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380]
          Length = 323

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILVARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A+AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLANASEEQEVALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
          Length = 214

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 8/127 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S + E + R++  LDD +         +   ++  A+RY+LL GGK++R  L      L 
Sbjct: 83  SYMIEKATRVNKALDDAV-------SLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELV 135

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL 
Sbjct: 136 GGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLA 195

Query: 126 YAFEIIS 132
           +AFE I+
Sbjct: 196 FAFEHIA 202


>gi|325281282|ref|YP_004253824.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712]
 gi|324313091|gb|ADY33644.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712]
          Length = 325

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 12/200 (6%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   I+Y +  GGK++R  L     +L+  +   AL+    IE  H Y+L+HDD+  MD+
Sbjct: 28  LFEPIKYIMEDGGKRLRPVLTLMAYNLYRDDIGKALKSAIGIEIFHNYTLLHDDV--MDD 85

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNI 154
             +RRG+ TVH +++   AI++G+     A++ I +   P  +   +  +Q+ + +    
Sbjct: 86  AELRRGRQTVHKKWNSNVAILSGDAAAITAYKYIETCEDPYLRRVIDGFNQVAMDVC--- 142

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
             +G       + +D+  +E  + MI  +KT  L+  +   GA++A A ++E + L  FG
Sbjct: 143 --KGQQYDMEFETRDDVTEEEYIQMIY-LKTSVLIAGSMRHGALIAGAPEHEYKELYDFG 199

Query: 215 ENLGIIFQLADDLLDCEEDL 234
             LG++FQL DD LD   D+
Sbjct: 200 GYLGLVFQLQDDYLDVYGDV 219


>gi|227113758|ref|ZP_03827414.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 323

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   + N    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|259415043|ref|ZP_05738965.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B]
 gi|259348953|gb|EEW60707.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B]
          Length = 336

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 11/216 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LL+Q    M ++H  R+     + +  GGK++R  L    A +        L++ A +E
Sbjct: 29  NLLIQ--ERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGDHHLKLAATVE 86

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    
Sbjct: 87  FIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVDTGSLRVL 144

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           +I +    ++     LQ      M    D    E     + + KT AL   A E G ++A
Sbjct: 145 DILANASATIAEGEVLQ------MTAATDLRTTEEIYLQVVRGKTAALFSAATEVGGVIA 198

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A+  + + L  +G+ LGI FQ+ADDLLD + D  K
Sbjct: 199 SATDAQVKALYDYGDALGIAFQIADDLLDYQGDTAK 234


>gi|329905263|ref|ZP_08274077.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547655|gb|EGF32446.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 243

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A  F  N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 50  GGKRIRPALVLLMARAFGYNGTHHHDLAAVVEFIHTATLLHDDV--VDESSLRRGRQTAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + + AF+++ S      D++R   +LS   N+  +G +  Q+L++ 
Sbjct: 108 ALFGNAASVLVGDFVYSRAFQMMVS-----VDDMRVMRILSDATNVIAEGEVL-QLLNMH 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA++A AS  + E    +G +LG  FQL DD+L
Sbjct: 162 DPDVTEARYLQVIRSKTAKLFEAAAQLGALVAGASAEDVEAAAEYGRSLGTAFQLIDDVL 221

Query: 229 D 229
           D
Sbjct: 222 D 222


>gi|68171324|ref|ZP_00544722.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88657619|ref|YP_506918.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67999251|gb|EAM85903.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599076|gb|ABD44545.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 325

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +      + N N+   + + AAIE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPIIFFIICKMLNCNNENKVPIAAAIELIHNATLLHDDV--IDESELRRGEKTSN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
           + +    +I+ G+ LL  +F+ +   K     +I SQ    +   +G +Q M+    ++I
Sbjct: 107 VIWGNKASILVGDFLLAISFQWLIKCKNLNILSILSQASKDVI--VGEVQQMISSHNINI 164

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             E     +   I   KT AL    CES A +A  S  EKE L+ FG N GI FQ+ DD+
Sbjct: 165 SKE-----KYIEIISAKTAALFSATCESAANLAQTSNEEKEALKNFGNNFGISFQIMDDI 219

Query: 228 LD 229
           LD
Sbjct: 220 LD 221


>gi|254785128|ref|YP_003072556.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901]
 gi|237684423|gb|ACR11687.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901]
          Length = 320

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A          + + A IE IH  +L+HDD+  +D   +RRG+P+ +
Sbjct: 41  GGKRLRPLLVLLAAKALGYQGQQHIELAAIIEFIHTATLLHDDV--VDVSALRRGRPSAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+    +++ G+ L + AF+++         NI    ++S T N+  +G +  Q+++ +
Sbjct: 99  AQWGNAPSVLVGDFLYSRAFQMMVG-----VGNIDVMAIMSDTTNVISEGEVQ-QLVNAK 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E     +   KT AL   ACE+GA++A  S  ++  ++  G +LG+ FQL DD L
Sbjct: 153 DPDVTEQNYMAVIHKKTAALFEAACETGAVIAGVSSEQRASIKQIGYHLGVAFQLVDDAL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|253686958|ref|YP_003016148.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753536|gb|ACT11612.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 323

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   + N    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|227328594|ref|ZP_03832618.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 296

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   + N    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|313903572|ref|ZP_07836962.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466125|gb|EFR61649.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 331

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F  +    L V AA+E IH  +L+HDD+  +D    RRG PTV+
Sbjct: 53  GGKRLRPALVLLAARNFQYDRERLLPVAAAVELIHMATLVHDDI--VDGATARRGLPTVN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +++   TA++ G+ L   AF ++++      DN   Q+M    + +    +   Q   + 
Sbjct: 111 VRWGTGTAVLTGDFLFARAFSLLAAD----GDNRVVQVMAEAVYEMSTGEI--EQQAQLF 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E   +     KT   +   C  G +M  A++ + E LR +G  +G+ FQ+ DD+L
Sbjct: 165 DPSTGEEGYYRRIYKKTAHFISHCCLMGGLMGGATEQQAEALRRYGYGIGMGFQVIDDIL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|293393170|ref|ZP_06637485.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582]
 gi|291424316|gb|EFE97530.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582]
          Length = 381

 Score = 88.6 bits (218), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 101 GGKRIRPMIAVLAARALQYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 158

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S      +++R   ++S   N+  +G +  Q++++ 
Sbjct: 159 AAFGNAASVLVGDFIYTRAFQMMTS-----LESLRVLALMSEAVNVIAEGEVL-QLMNVH 212

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI++ A++ +++ L+ +G  LG  FQL DDLL
Sbjct: 213 DPDITEESYMRVIYSKTARLFEAAAQSSAILSGATEAQEQGLQDYGRYLGTAFQLIDDLL 272

Query: 229 DCEED 233
           D   D
Sbjct: 273 DYSAD 277


>gi|329893636|ref|ZP_08269770.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
 gi|328923563|gb|EGG30875.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
          Length = 320

 Score = 88.6 bits (218), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 12/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L     +             A IE +H  +L+HDD+  +D   +RRG+PT +
Sbjct: 41  GGKRMRPLLALLTGAALGGISQPHKHFAAVIEFLHTATLLHDDV--VDVSSLRRGRPTAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
             Y   ++++ G+ + + AF+++ +      LKD      +   T+ I    +L  Q++ 
Sbjct: 99  AAYGNASSVLVGDFIYSRAFQLLVNIGDMRILKD------IADTTNRIAEGEVL--QLVR 150

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             D    ETQ + + + KT  L   AC  GA+++ AS+ + E LR FG NLGI FQ+ DD
Sbjct: 151 AGDADTTETQYYEVIQAKTAVLFGAACYGGALLSGASERKAEELREFGINLGIAFQIVDD 210

Query: 227 LLDCEED 233
           +LD + D
Sbjct: 211 ILDYQGD 217


>gi|255024117|ref|ZP_05296103.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Listeria monocytogenes FSL J1-208]
          Length = 98

 Score = 88.6 bits (218), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 54/84 (64%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MDN   RRGK T H
Sbjct: 8   GGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH 67

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS 132
             + + TAI+AG+ LLT AF I++
Sbjct: 68  KVFGDATAILAGDALLTLAFSILA 91


>gi|94969054|ref|YP_591102.1| trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551104|gb|ABF41028.1| Trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 331

 Score = 88.6 bits (218), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A L     L A+R+GA +E IH  +L+HDD+  +D+  IRRG+P+ +
Sbjct: 51  GGKRLRPALLLLSAKLMAYRGLGAVRLGAVVEIIHTATLVHDDI--IDDAEIRRGRPSAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            Q+     ++AG+ L   AF++ ++     + D      ++ LT     Q M+ G++L I
Sbjct: 109 TQWGNSKCVLAGDWLYMQAFKVAVAERNFAVLDT-----LIELT-----QKMVEGELLQI 158

Query: 168 QD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +   + I   + F +   KT  L       G I+  A+  + E+L  +G  +G+ FQ+ D
Sbjct: 159 EKLGKLISLQEHFDLIDRKTACLFSVCMRLGGILGGATAEQIEKLGEYGHCVGMAFQIVD 218

Query: 226 DLLD 229
           D+LD
Sbjct: 219 DVLD 222


>gi|241768108|ref|ZP_04765590.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
 gi|241360555|gb|EER57605.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
          Length = 172

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 24/126 (19%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTA-----------LRVG---------AAIE 80
           A+RYA+L GGK++R  LV    + F   H  A           LR G          A+E
Sbjct: 43  AMRYAVLDGGKRLRPLLVL---AAFEAVHGEAVAAGAADGNAALRAGMQAAALRAACAVE 99

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSL+HDD+P MDN  +RRGKPTVH+Q+ E  A++AG+ L  +AFE+++    ++  
Sbjct: 100 LIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDALQAFAFELLTPEDERIPP 159

Query: 141 NIRSQL 146
            +++ L
Sbjct: 160 AVQATL 165


>gi|134095950|ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans]
 gi|133739853|emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Herminiimonas
           arsenicoxydans]
          Length = 329

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 50  GGKRIRPVLVLLMANALGYRGTHQYDLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ +       NIR+  +L+   N+  +G +  Q+L++ 
Sbjct: 108 ALFGNAASVLVGDFLHSRAFQMMVTVG-----NIRAMQILADATNVIAEGEVL-QLLNMH 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E +   + + KT  L   A + GA++A AS++E E    +G +LG  FQL DD+L
Sbjct: 162 DPDISEERYTQVIRSKTAKLFEAAAQLGALIAGASEDEIEAAAEYGRSLGTAFQLIDDVL 221

Query: 229 DCE---EDLPK 236
           D     ED+ K
Sbjct: 222 DYSGHAEDIGK 232


>gi|315926233|ref|ZP_07922432.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315620493|gb|EFV00475.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 335

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 95/186 (51%), Gaps = 17/186 (9%)

Query: 50  GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK +R  L+  CASL   ++ +   A+ + A +E IH  SLIHDD+  +D+   RRGKP 
Sbjct: 54  GKMLRPRLLLLCASLGPAWHAHQREAVELAAMVELIHLASLIHDDI--IDDARFRRGKPA 111

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQML 165
           +  +Y +  A+ AG+      F +      QLKD + +   +L+        G +G   L
Sbjct: 112 IQSRYGKDAAVYAGD------FIMARVNYYQLKDGLNAPGAILAEAIEKMCAGEIGQARL 165

Query: 166 DIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             +    D TQ    +  K KTGAL   AC  GA+    +    E+L  FGE LGI+FQL
Sbjct: 166 RHRP---DATQAMYFENIKGKTGALFAAACRIGAMTGGCAPEAIEQLARFGELLGILFQL 222

Query: 224 ADDLLD 229
            DDLLD
Sbjct: 223 RDDLLD 228


>gi|218531359|ref|YP_002422175.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
 gi|218523662|gb|ACK84247.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
          Length = 340

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L +      A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 58  GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E+   R +G NLGI FQL DD+
Sbjct: 170 KNIETSENEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229

Query: 228 LD 229
           LD
Sbjct: 230 LD 231


>gi|329943348|ref|ZP_08292122.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10]
 gi|328814895|gb|EGF84885.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10]
          Length = 290

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 11/203 (5%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + + YAL  GGK+IR  LV   A   ++     L    AIE IH  +LI DDLP MD+  
Sbjct: 31  APVEYALTSGGKRIRPMLVCMIAKGLDMGR-DVLDSALAIEFIHTSTLIADDLPCMDDDD 89

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151
            RRG+PTVH  +DE +A++A   L+  A+  I     +LK         +    ++  +T
Sbjct: 90  ERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSAGVDSKEVDYAYDMISDIT 149

Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             N G+ G+LGGQ  D+         V  I   KTGAL   AC SG +    +     ++
Sbjct: 150 DKNFGVHGVLGGQYEDMFFNNEGPEHVQSIIHKKTGALFEIACVSGWLFGGGTPECVPQV 209

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           R F +  G++FQ+ DD+LD  +D
Sbjct: 210 REFSQTFGLLFQIKDDILDIHQD 232


>gi|241068508|ref|XP_002408454.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
 gi|215492442|gb|EEC02083.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
          Length = 345

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 118/214 (55%), Gaps = 16/214 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVG 76
           IL+DL++        + ++ L+  +   LL  GGK+IR  L    A +F+      +++ 
Sbjct: 84  ILNDLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDNHIKLA 138

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           +A+E IH  +L+HDD+  +D+  +RR KPT +I +   T+I+ G+ L + +F+++ +  +
Sbjct: 139 SAVEFIHTATLLHDDV--VDDSTLRRFKPTANIIWGSKTSILVGDFLFSQSFKLMIASGS 196

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACES 195
                I++  +L+    I  +G +  Q++ + +  I   + +  I K KT  L   +CE 
Sbjct: 197 -----IKAMNVLAKASAIISEGEVV-QLVKLNERRIITIEEYQQIVKSKTAELFGASCEV 250

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GAI+A    +  + ++ FG+ LG IFQ+ DDLLD
Sbjct: 251 GAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLD 284


>gi|170751717|ref|YP_001757977.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170658239|gb|ACB27294.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 339

 Score = 88.2 bits (217), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 10/183 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  L   CA L      T   +++ A++E +H  +L+HDD+  +D   +RRG+  
Sbjct: 56  GGKRLRPILTLACAQLCGYAGATEGDVKLAASVEFMHTATLLHDDV--VDESDMRRGRVA 113

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
             I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+ +
Sbjct: 114 ARIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTN 167

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++   DE     + + KT  L   ACE G ++A   + E+   R +G NLGI FQL DD
Sbjct: 168 AKNLETDEAAYLAVIRGKTAELFAAACEVGPVLAGRPEAEQAAARSYGMNLGIAFQLIDD 227

Query: 227 LLD 229
           +LD
Sbjct: 228 VLD 230


>gi|288942267|ref|YP_003444507.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
 gi|288897639|gb|ADC63475.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
          Length = 289

 Score = 88.2 bits (217), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 11/195 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RL  A+R+A+  GG ++R  L +   A+  + ++  A   G AIE +HC SL+HDDLP  
Sbjct: 26  RLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDYAAADAAGVAIELLHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG P+VH  + E  A++AG+ L+  AFE ++       + + + L+L+++ ++G
Sbjct: 86  DDSPLRRGVPSVHRAFGEPLAVLAGDALIILAFEHLARVLADSPERL-APLLLTISRSVG 144

Query: 156 L-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  G+  GQ  + + +   E       + KTG+L      + A  A  +  + E     G
Sbjct: 145 MPHGITAGQAWECEPQVTVEE----YHRAKTGSLF---TAATAAGALVAGADAEAWSVVG 197

Query: 215 ENLGIIFQLADDLLD 229
           + +G  +Q+ADDL D
Sbjct: 198 DKIGEAYQVADDLRD 212


>gi|323343701|ref|ZP_08083928.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269]
 gi|323095520|gb|EFZ38094.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269]
          Length = 336

 Score = 88.2 bits (217), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GK++R  L+   A   N   +T +   AA+  E +H  SL+HDD+  +D    RRG+ +
Sbjct: 55  AGKRMRPMLILLIAK--NFGDITPVSQNAAVGLELLHTASLVHDDV--VDESGERRGQAS 110

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V+  Y+   A++ G+ +L+ A   +S   ++      +QL  +L+    LQ      + +
Sbjct: 111 VNATYNNKVAVLVGDYILSTALLYVSYTHSETIVRYLAQLGRTLSDGEILQ------LSN 164

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           IQ+  I E   + + K KT AL       GA+ AHAS+++ E  + FG+NLGIIFQ+ DD
Sbjct: 165 IQNREISEKVYYEVIKQKTAALFEACAGIGALSAHASESDVEAAKKFGQNLGIIFQIRDD 224

Query: 227 LLD 229
           + D
Sbjct: 225 IFD 227


>gi|125583193|gb|EAZ24124.1| hypothetical protein OsJ_07863 [Oryza sativa Japonica Group]
          Length = 342

 Score = 88.2 bits (217), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 11/221 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  +  +R+ SA+RYA+L G       K+    L      L      
Sbjct: 48  SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL--LTYAF 128
             +    A++ +    L+++DLP  + G  RRG P+    Y    A++AG+ L  L Y  
Sbjct: 108 APVPAALALQMVQAGWLVNEDLPWFEAGPKRRGGPSNQAAYGTDMAVLAGDALFPLAYTH 167

Query: 129 EIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTG 186
            I  +P  + +   +  +++  L   +G  GM  GQ LD+     + E +V  +   K G
Sbjct: 168 VIAQNPSPEPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 227

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   +   GA++  A  +E+  LR +G  +G+++QL DD+
Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268


>gi|332526065|ref|ZP_08402203.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2]
 gi|332109908|gb|EGJ10536.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2]
          Length = 306

 Score = 88.2 bits (217), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 21/204 (10%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDL 92
           +L +AIR+A+  GG +IR  L   C ++   N  T    A    +AIE IHC SL+HDDL
Sbjct: 26  KLAAAIRHAVFPGGARIRPQL---CIAVAMANGDTDPELADAAASAIELIHCASLVHDDL 82

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P  D+   RRG+P+VH  Y E  A++AG+ L+  AF+ + +   +  + + ++++ ++  
Sbjct: 83  PCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGAAGARHPERM-ARVLQTVAR 141

Query: 153 NIGLQ-GMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKER 209
            +G   G++ GQ  +       E +V +   Q+ KTGAL   A  +    A AS  + E 
Sbjct: 142 GVGTPLGIIAGQAWEC------EPRVALSDYQRAKTGALFAAATAA---GAQASGGDGET 192

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
            R  G+ LG  +Q+ADD+ D   D
Sbjct: 193 WRALGDWLGEAYQVADDVRDALAD 216


>gi|51245595|ref|YP_065479.1| octaprenyl-diphosphate synthase [Desulfotalea psychrophila LSv54]
 gi|50876632|emb|CAG36472.1| related to octaprenyl-diphosphate synthase [Desulfotalea
           psychrophila LSv54]
          Length = 336

 Score = 88.2 bits (217), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 35/205 (17%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + Y LL GGK+IR  LV   A L   N L   R+    E +H  +L HDD+  +D+  +R
Sbjct: 41  LEYGLLSGGKRIRPLLVLMAARLCGNNGLETYRLATGFEYLHAATLFHDDI--IDHSDLR 98

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--- 158
           RG+ ++  ++    AI+AG+ L T A                   M+ +   +G +G   
Sbjct: 99  RGQESIAKKFGMEAAILAGDFLHTRA-------------------MIFVGEMVGAEGLRR 139

Query: 159 -------MLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                  M+ G+ L +   Q+  I E   +     KTG L+  ACE GA+    S+ E  
Sbjct: 140 FGKATSAMVDGEFLQLRNAQEYNISELDYYRAVMGKTGVLIAAACELGALYGGGSEAEIA 199

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            LR +GE LG  FQ+ DDLLD + D
Sbjct: 200 ALRSYGEKLGSAFQIVDDLLDYQGD 224


>gi|332287924|ref|YP_004422825.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
 gi|313848497|emb|CBY17501.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci RD1]
 gi|325506551|gb|ADZ18189.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
 gi|328915189|gb|AEB56022.1| geranyltranstransferase [Chlamydophila psittaci 6BC]
          Length = 293

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 11/203 (5%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + + YAL  GGK+IR  LV   A   ++     L    AIE IH  +LI DDLP MD+  
Sbjct: 34  APVEYALTSGGKRIRPMLVCMIAKGLDMGR-DVLDSALAIEFIHTSTLIADDLPCMDDDD 92

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151
            RRG+PTVH  +DE +A++A   L+  A+  I     +LK         +    ++  +T
Sbjct: 93  ERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSAGVDSKEVDYAYDMISDIT 152

Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             N G+ G+LGGQ  D+         V  I   KTGAL   AC SG +    +     ++
Sbjct: 153 DKNFGVHGVLGGQYEDMFFNNEGPEHVQSIIHKKTGALFEIACVSGWLFGGGTPECVPQV 212

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           R F +  G++FQ+ DD+LD  +D
Sbjct: 213 REFSQTFGLLFQIKDDILDIHQD 235


>gi|269958400|ref|YP_003328187.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel]
 gi|269848229|gb|ACZ48873.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel]
          Length = 327

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 10/184 (5%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+IR  ++     +  +     + + AAIE IH  +L+HDD+  +D    RRG  T
Sbjct: 47  LSGGKRIRPIMLLAVCKMLALQDERRILIAAAIEFIHSATLLHDDV--VDQSESRRGTKT 104

Query: 107 VHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +  +    +++ G+ LL  AF+ ++S    +L   +       +T  I  Q M+  + L
Sbjct: 105 SNSLWGNKASVLVGDFLLATAFQWLVSCSNFELLTTLSRASCTIVTGEI--QQMVYSKSL 162

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           DI  E     +   I   KT AL    CES  +++ +S ++++ L+ FG N GI FQ+ D
Sbjct: 163 DITRE-----KYLEIISAKTAALFSATCESAGVLSESSFDDRKALKNFGHNFGITFQIVD 217

Query: 226 DLLD 229
           DLLD
Sbjct: 218 DLLD 221


>gi|188582094|ref|YP_001925539.1| polyprenyl synthetase [Methylobacterium populi BJ001]
 gi|179345592|gb|ACB81004.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
          Length = 288

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 18/221 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECA-SLFNVNHL 70
           +RI+T+LD  +    +H +      RL  AIRYA+  GG +IR  L    A +  + +  
Sbjct: 5   RRIETVLDGAV----AHAEAPGAPPRLAEAIRYAVFPGGHRIRPRLCVAVALACGDDDPA 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +     AIE +HC SL+HDDLP  D+   RR KP+VH  +    A++ G+ L+  AFE 
Sbjct: 61  ASDAAAGAIELLHCASLVHDDLPCFDDAATRRQKPSVHAAFGVPLAVLTGDALIVAAFET 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI--QKMKTGAL 188
           ++    +    + + + L         G++ GQ  +       E  V ++  Q+ KTGAL
Sbjct: 121 LARGAARSPARLAALVGLVARAVGSPSGIVAGQAWE------SEPHVDLVEYQQAKTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                 +    A A+       R  GE LG  +Q+ADDL D
Sbjct: 175 F---AAATVAGAAAAGAPPLPWRLLGECLGEAYQVADDLRD 212


>gi|238787578|ref|ZP_04631376.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641]
 gi|238724365|gb|EEQ16007.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641]
          Length = 323

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   +++   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMAAATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|154151748|ref|YP_001405366.1| farnesyltranstransferase [Candidatus Methanoregula boonei 6A8]
 gi|154000300|gb|ABS56723.1| Farnesyltranstransferase [Methanoregula boonei 6A8]
          Length = 325

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 11/226 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-S 63
           L + L+  +++ID +++         +  + +  LLSA      GGK++R  +V   A +
Sbjct: 8   LSAYLKSVAQQIDGMIEKNFTHAGGELD-RASAHLLSA------GGKRLRPAVVMLSADA 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + + +    +    A+E  H ++LIHDD+  MD   +RRG PTVH ++D  T I+AG+ L
Sbjct: 61  IRHGSSKDVMPAALALEVTHTFTLIHDDI--MDGDSLRRGVPTVHTKWDMPTGILAGDVL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              AFE I   K      +++  +L+       +G       + + +  +E  + M+ K 
Sbjct: 119 YARAFEFICQSKADEGPKVQAVALLARACADICEGQHQDMSFEHRADVTEEEYMAMVAK- 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTG L   A   G  +A  +  +   L  FG N GI FQ+ DDL+D
Sbjct: 178 KTGVLYAAAAAIGGTLAGGNPEQIRALYQFGLNTGIAFQIQDDLID 223


>gi|62959223|gb|AAY23719.1| farnesyl diphosphate synthase [Prochlorococcus marinus str. SS2]
          Length = 145

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKPT HI + E TA++AG+ L   AF +++  +T     +R+++   L    G  GM
Sbjct: 12  MRRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGM 71

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GGQM+D+  E    +   V  +Q++KTGAL+    E GAI+   ++  +  LR +  +L
Sbjct: 72  AGGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDL 131

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ADD+LD E
Sbjct: 132 GLAFQIADDILDVE 145


>gi|167044388|gb|ABZ09065.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote
           HF4000_APKG6D3]
          Length = 283

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 23/224 (10%)

Query: 14  KRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNH 69
           K+I+ +LD +L L T S  +          ++YAL GGK+IR     L +EC    + N 
Sbjct: 20  KKINNVLDSELELYTESEFK--------EPLKYALGGGKRIRPIILLLASECVGEIDDNT 71

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           L A     AIE +H  S+IHDD+  +DN  +RR K   HI+Y   T+++ G+ +L     
Sbjct: 72  LAA---ACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNTSVLTGDFVLGLILN 126

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I S       +N R    L+ T  +  +G +    L+  ++   +  + +I+  KT    
Sbjct: 127 IASRI-----NNPRVTKNLATTAMMMSEGEVIESRLEASEDVTFDDYLKVIE-YKTATAF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A   GAI++  ++ E E L  +G+N+GI +Q+ DDLLD + +
Sbjct: 181 ETASRLGAIISGGTEEEIESLADYGKNIGIAYQIRDDLLDWQNE 224


>gi|163852524|ref|YP_001640567.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
 gi|163664129|gb|ABY31496.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
          Length = 340

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L +      A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 58  GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E+   R +G NLGI FQL DD+
Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229

Query: 228 LD 229
           LD
Sbjct: 230 LD 231


>gi|30249867|ref|NP_841937.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
 gi|30180904|emb|CAD85826.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 322

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A LF+   L    + A +E IH  +L+HDD+  +D   +RR + T +
Sbjct: 43  GGKRLRPALVILAAGLFDYKGLHHHNLAAVVEFIHTATLLHDDV--VDESELRRNQATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++         N+R   +L+   N   +G +  Q+L+ +
Sbjct: 101 ALFGNAASVLVGDFLYSRAFQMMVEVG-----NMRVMEVLADATNTIAEGEVL-QLLNCR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  ++E     + + KT  L   A   GAI+  A+  E+E L  +G +LG  FQL DDLL
Sbjct: 155 DPDVEEENYLQVIRFKTAKLFEAAARLGAILGGATPAEEEALAAYGMHLGTAFQLVDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|114330832|ref|YP_747054.1| farnesyltranstransferase [Nitrosomonas eutropha C91]
 gi|114307846|gb|ABI59089.1| Farnesyltranstransferase [Nitrosomonas eutropha C91]
          Length = 322

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A L++        + A +E IH  +L+HDD+  +D   +RR + T +
Sbjct: 43  GGKRLRPALVILAAGLYDYKGTHHYNLAAVVEFIHTATLLHDDV--VDESQLRRNQATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        DN+R   +L+   N   +G +  Q+L+ +
Sbjct: 101 ALFGNAASVLVGDFLYSRAFQMMVEV-----DNMRVMEVLADATNTIAEGEVL-QLLNCR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  ++E     + + KT  L   A   GAI+  A+  E+E L  +G +LG  FQL DDLL
Sbjct: 155 DPDVEEENYLQVIRFKTAKLFEAAGRLGAILGGATPAEEEALAAYGMHLGTAFQLVDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|240139858|ref|YP_002964335.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1]
 gi|240009832|gb|ACS41058.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1]
          Length = 340

 Score = 88.2 bits (217), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L +      A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 58  GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E+   R +G NLGI FQL DD+
Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229

Query: 228 LD 229
           LD
Sbjct: 230 LD 231


>gi|254562277|ref|YP_003069372.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4]
 gi|254269555|emb|CAX25521.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4]
          Length = 340

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L +      A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 58  GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E+   R +G NLGI FQL DD+
Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229

Query: 228 LD 229
           LD
Sbjct: 230 LD 231


>gi|254464181|ref|ZP_05077592.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I]
 gi|206685089|gb|EDZ45571.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I]
          Length = 328

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 9/206 (4%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + M ++H  R+     + +  GGK++R  L    A +        +++ A +E IH  +L
Sbjct: 26  TRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGDHHVKLAATVEFIHTATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++   ++    +I +   
Sbjct: 86  LHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETESLRVLDILANAS 143

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            ++     LQ      M    +   DE     + + KT AL   A E G ++A A + + 
Sbjct: 144 ATIAEGEVLQ------MTAASNLKTDEGIYLQVVRGKTAALFSAATEVGGVIAGAPETQV 197

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           + L  +G+ LGI FQ+ADDLLD + D
Sbjct: 198 KALFEYGDALGIAFQIADDLLDYQGD 223


>gi|50119637|ref|YP_048804.1| octaprenyl diphosphate synthase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49610163|emb|CAG73603.1| octaprenyl-diphosphate synthase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 323

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     N    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALAYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S      +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----LESLRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|238650786|ref|YP_002916641.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic]
 gi|238624884|gb|ACR47590.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic]
          Length = 371

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 124/227 (54%), Gaps = 20/227 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           K+Q++ K   T L++L++        + ++ L+  +   LL  GGK+IR  L    A +F
Sbjct: 50  KIQQDLKDEVTKLNNLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 104

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 105 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 162

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182
            +F+++ +  +     I++  +L+    I  +G +  Q++ + +     IDE Q   I K
Sbjct: 163 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVV-QLVKLNERRIITIDEYQ--QIVK 214

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   AC  GAI+A    +  + ++ FG+ LG IFQ+ DDLLD
Sbjct: 215 SKTAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLD 261


>gi|299538563|ref|ZP_07051846.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
           fusiformis ZC1]
 gi|298726150|gb|EFI66742.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
           fusiformis ZC1]
          Length = 324

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 20/188 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A   + +      V   +E IH  SL+HDD+  +D+  +RRG+PTV 
Sbjct: 46  GGKRIRPIFVLLGAKFGDYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVK 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML---GGQML 165
            Q++   A+  G+ +   A E I    T+L+D         L H I  + M+    G+++
Sbjct: 104 SQWNNRVAMYTGDFIFARALEYI----TKLED--------PLVHQILARTMVEICNGEVI 151

Query: 166 DIQDEF-IDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            I+D+F +D+     F   K KT  L+  +CE GA+ A         L+ FG  +G+ FQ
Sbjct: 152 QIEDKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDTKTVRHLKRFGYFVGMSFQ 211

Query: 223 LADDLLDC 230
           + DD+LD 
Sbjct: 212 IIDDVLDI 219


>gi|86751112|ref|YP_487608.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
 gi|86574140|gb|ABD08697.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
          Length = 287

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 19/192 (9%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL +A+R A+   G ++R  L    A+    ++      GAA+E +HC SL+HDDLP  D
Sbjct: 26  RLAAAMRSAVFPRGARVRPRLCHSVAAACGDDNPATEAAGAALELMHCASLVHDDLPCFD 85

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              IRRG+P+VH  + E  A++ G+ L+  AF+ I+      + N     +L LT  IG 
Sbjct: 86  GADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQTIA------RVNCAPDRLLKLTQVIGS 139

Query: 157 Q-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
                 G++ GQ  + + E      +    + KTGAL      + A  A ++  + E  R
Sbjct: 140 AVGVPLGIVAGQAWECESEI----NLAHYHRSKTGALFVA---ATAAGAASAGADPEPWR 192

Query: 212 CFGENLGIIFQL 223
             GE +G  +Q+
Sbjct: 193 MVGEKIGEAYQV 204


>gi|313205981|ref|YP_004045158.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445297|gb|ADQ81652.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
 gi|325336579|gb|ADZ12853.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer
           RA-GD]
          Length = 323

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 13/186 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V     LF  +   A++   AIE  H ++LIHDD+  MD+  +RR KPT+H
Sbjct: 38  GGKRLRPIMVLMGCELFGGSLEKAMKPALAIEFFHNFTLIHDDI--MDDAPLRRNKPTIH 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I++G+ LL  A++     + +L    +   + S T  +    +  GQ +D+ 
Sbjct: 96  TLHGINVGILSGDALLIKAYQFFEDLEPELFK--KCITLFSETGAV----LCEGQQMDVN 149

Query: 169 DE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            E       E  + MI   KTG L   + + GA++A A++ E E L  FG+++GI FQ+ 
Sbjct: 150 FETNSNVTYEDYIKMIT-YKTGVLSAASFKIGAMIAGATEQEAEALYQFGKHIGIAFQIM 208

Query: 225 DDLLDC 230
           DD LD 
Sbjct: 209 DDYLDV 214


>gi|62959225|gb|AAY23720.1| farnesyl diphosphate synthase [Prochlorococcus marinus str.
           CCMP1377]
          Length = 145

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 2/133 (1%)

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI + E TA++AG+ L   AF +++  +T     +R+++   L    G  GM 
Sbjct: 13  RRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGMA 72

Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQM+D+  E    +   V  +Q++KTGAL+    E GAI+   ++  +  LR +  +LG
Sbjct: 73  GGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDLG 132

Query: 219 IIFQLADDLLDCE 231
           + FQ+ADD+LD E
Sbjct: 133 LAFQIADDILDVE 145


>gi|317495880|ref|ZP_07954243.1| polyprenyl synthetase [Gemella moribillum M424]
 gi|316914057|gb|EFV35540.1| polyprenyl synthetase [Gemella moribillum M424]
          Length = 320

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 22/206 (10%)

Query: 33  TQHNDRLLSAI--RYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLI 88
           T+ +D+ L+ I   Y L GGK++R  L+  CA+L  F  N    +R+ + +E IH  SLI
Sbjct: 24  TRSDDKKLNTIIKEYFLNGGKRVRVLLLLICANLGDFEKNKKNIIRIASIVEIIHTASLI 83

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG+ T+   Y E  A+  G+    Y F  +     + KD  R  + L
Sbjct: 84  HDDI--IDKAKTRRGQTTMSRAYGEEYALYVGD----YLFATVLREIAEFKDE-RLHMYL 136

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           S T    L+ +  G++  IQ+E +       T      K KT  L+ FA  +G+I++ AS
Sbjct: 137 SNT----LKELCIGEI--IQEEGLYNIRTRRTDYLKKIKRKTAILIAFATSAGSIVSCAS 190

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
               +R   FG  LG+ +Q+ DD LD
Sbjct: 191 NENIQRSYAFGYYLGMSYQIIDDYLD 216


>gi|116622453|ref|YP_824609.1| geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076]
 gi|116225615|gb|ABJ84324.1| Geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076]
          Length = 333

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A L      +A+++GA +E IH  +L+HDD+  +D    RRG+P+ +
Sbjct: 52  GGKRLRPALLLLSAKLVGNGGPSAIQLGAVVELIHAATLVHDDV--IDTAQTRRGRPSTN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDI 167
           +++   T ++AG+ L   AF+I       L++  RS  ML L   IGL Q M+ G++L +
Sbjct: 110 VKWGNHTCVLAGDWLYMQAFQI------ALRE--RSFQMLDLL--IGLTQMMVEGELLQL 159

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +      + E     +   KT  L       G +  H     +E+L  +  NLG+ FQL 
Sbjct: 160 ERIGRINVSEADCMELVDRKTACLFSVCARLGGLCGHTDPQTQEKLGEYAWNLGMAFQLV 219

Query: 225 DDLLD 229
           DD+LD
Sbjct: 220 DDVLD 224


>gi|256379027|ref|YP_003102687.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255923330|gb|ACU38841.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 346

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A         AL    A+E +H +SL+HDD+  MD    RR +PT   
Sbjct: 62  GKAIRPVLVLLAARAVGGRAEDALPAAVAVELVHNFSLLHDDV--MDGDATRRHRPTAWA 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++AG+ L+T A ++++   +      R  ++LS      +Q +L GQ  D+  
Sbjct: 120 VFGVNAAVLAGDALMTLALDVLAG--SGHPAAARGIVLLSAA----VQELLDGQSSDLGF 173

Query: 170 EFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E  DE  V    +M   KT AL+   C  GA+    S ++   L  FGE  G+ FQ  DD
Sbjct: 174 EERDEVGVAECVRMAEGKTAALLGACCSLGALFGGGSADQVGELGLFGERTGLAFQFVDD 233

Query: 227 LLDCEED 233
           LL    D
Sbjct: 234 LLGIWGD 240


>gi|229586816|ref|YP_002845317.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5]
 gi|228021866|gb|ACP53574.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5]
          Length = 371

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 103/184 (55%), Gaps = 13/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A +F+      +++ +A+E IH  +L+HDD+  +D+  +RR KPT +
Sbjct: 88  GGKRIRPLLTIITAKMFDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 145

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +   T+I+ G+ L + +F+++ +  +     I++  +L+    I  +G +  Q++ + 
Sbjct: 146 VIWGSKTSILVGDFLFSQSFKLMVASGS-----IKAMNVLAKASAIISEGEVV-QLVKLN 199

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +     IDE Q   I K KT  L   AC  GAI+A    +  + ++ FG+ LG IFQ+ D
Sbjct: 200 ERRIITIDEYQ--QIVKSKTAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVID 257

Query: 226 DLLD 229
           DLLD
Sbjct: 258 DLLD 261


>gi|329889422|ref|ZP_08267765.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328844723|gb|EGF94287.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 367

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  L    A    +    A+    ++ A++E IH  +L+HDD+  +D   +RRGK
Sbjct: 84  GGKRLRPLLTVAAAR--AIGQTGAIDGPKKLAASVEFIHTATLLHDDI--VDGSEMRRGK 139

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
              H+ +   ++++ G+ L   AFE++        D++R+  +L+    +  +G +  Q+
Sbjct: 140 VAAHLIWGSASSVLVGDFLFARAFELMVE-----TDSLRALGILARASAVIAEGEVL-QL 193

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D  +D      I + KT  L   A ESGA+ A A+  +   LR +G  LGI FQLA
Sbjct: 194 TRAHDLNLDLDTYLQIIRAKTAELFAAAAESGAVGAGATDEQVAALRDYGMALGIAFQLA 253

Query: 225 DDLLD 229
           DD LD
Sbjct: 254 DDALD 258


>gi|323704336|ref|ZP_08115915.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536402|gb|EGB26174.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 319

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 21/226 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           ++E+ K+ID  +   +   +  ++   +D +LS       GGK+IR  LV   A +   +
Sbjct: 8   VKEDMKKIDEFILANVKTNSPTIKKAIDDLVLS-------GGKRIRPLLVIAIARMGEYS 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + + A+IE +H  +LIHDD+  +D+  +RRG+ +V  +Y + TA+  G+ L + AF
Sbjct: 61  EEKIIPIAASIEIMHMATLIHDDI--IDDSKMRRGQKSVQSKYGKETAVFTGDFLFSQAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KT 185
            +I+        +I S+  L L    G++ +  G++    + + +D +    ++++  KT
Sbjct: 119 NLIA--------DIISKENLKLIAK-GVKAICEGEIEQFDNRYNLDLSIKKYLKRIYRKT 169

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             L   +CESGA  A   +     +R FG  +G  FQ+ DD+LD E
Sbjct: 170 ALLFAISCESGASQAGLPKEMIRAMRHFGLEIGTAFQIVDDILDYE 215


>gi|156937956|ref|YP_001435752.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566940|gb|ABU82345.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 327

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 14/185 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV             AL   AA+E +H ++L+HDD+  MD   +RRG PTVH
Sbjct: 41  GGKRLRPALVLLVNKALGGEVEGALPAAAAVELLHNFTLVHDDI--MDRDELRRGVPTVH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + Y E  AI+AG+ L   A+E ++ SP+     ++  ++   LT +     +  GQ +D+
Sbjct: 99  VLYGESMAILAGDLLYAKAYEALLQSPQPP---DLVKEMTEVLTWSA--VTVAEGQAMDM 153

Query: 168 QDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           + E      +E  + MI+K KTGAL   +   GA+ A+  +  K+ ++ FG  LG  FQ+
Sbjct: 154 EFEKRWDVTEEEYLEMIEK-KTGALFGASAALGALTANKREV-KDLMKEFGLILGKAFQI 211

Query: 224 ADDLL 228
            DD+L
Sbjct: 212 KDDVL 216


>gi|15892647|ref|NP_360361.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7]
 gi|15619817|gb|AAL03262.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7]
          Length = 371

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 122/226 (53%), Gaps = 18/226 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           K+Q++ K   T L++L++        + ++ L+  +   LL  GGK+IR  L    A +F
Sbjct: 50  KIQQDLKDEVTKLNNLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 104

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 105 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 162

Query: 126 YAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            +F+++ +  +    N+  ++  ++S    + L  +   +++ I     DE Q   I K 
Sbjct: 163 QSFKLMVASGSIKAMNVLAKASAIISAGEVVQLVKLNERRIITI-----DEYQ--QIVKS 215

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT  L   AC  GAI+A    +  + ++ FG+ LG IFQ+ DDLLD
Sbjct: 216 KTAELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLD 261


>gi|92112606|ref|YP_572534.1| trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM
           3043]
 gi|91795696|gb|ABE57835.1| Trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM
           3043]
          Length = 337

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N      + +   IE +H  +L+HDD+  +D  ++RRGK T +
Sbjct: 58  GGKRLRPLLVLLAARSLNYPGDRHVTLATLIEFMHTSTLLHDDV--VDESHLRRGKATAN 115

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++         ++R   +LS    +  +G +  Q+ +I 
Sbjct: 116 DAWGNAPSVLVGDFLYSRSFQMMVE-----VGSMRVMEILSGATCVIAEGEVL-QLTNIG 169

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  IDE   F   + KT  L   A  SGA++A A+  ++E L+ +G  LG+ FQL DDLL
Sbjct: 170 NPDIDEAAYFDTIQGKTAMLFEAASHSGAVLAEATPAQEEALKLYGRYLGLAFQLVDDLL 229

Query: 229 DCEED 233
           D + D
Sbjct: 230 DYQGD 234


>gi|308388198|pdb|3OYR|A Chain A, Crystal Structure Of Polyprenyl Synthase From Caulobacter
           Crescentus Cb15 Complexed With Calcium And Isoprenyl
           Diphosphate
 gi|308388199|pdb|3OYR|B Chain B, Crystal Structure Of Polyprenyl Synthase From Caulobacter
           Crescentus Cb15 Complexed With Calcium And Isoprenyl
           Diphosphate
          Length = 345

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A L   ++    ++ AA+E IH  +L+HDD+  +D   +RRGK   H
Sbjct: 64  GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L   AFE++        +++++  +L+    +  +G +  Q++   
Sbjct: 122 LIWGGAQSVLVGDFLFARAFELMVE-----TNSMKALEILARASRVIAEGEVL-QLMRSH 175

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + +     I + KT  L   A E+GA+ A     + E LR +G NLG+ FQLADD L
Sbjct: 176 DLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDAL 235

Query: 229 D 229
           D
Sbjct: 236 D 236


>gi|304570808|ref|YP_002517571.2| trans-isoprenyl diphosphate synthase [Caulobacter crescentus
           NA1000]
          Length = 336

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A L   ++    ++ AA+E IH  +L+HDD+  +D   +RRGK   H
Sbjct: 55  GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L   AFE++        +++++  +L+    +  +G +  Q++   
Sbjct: 113 LIWGGAQSVLVGDFLFARAFELMVE-----TNSMKALEILARASRVIAEGEVL-QLMRSH 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + +     I + KT  L   A E+GA+ A     + E LR +G NLG+ FQLADD L
Sbjct: 167 DLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDAL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|258542159|ref|YP_003187592.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633237|dbj|BAH99212.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636296|dbj|BAI02265.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639349|dbj|BAI05311.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642405|dbj|BAI08360.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645460|dbj|BAI11408.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648513|dbj|BAI14454.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651566|dbj|BAI17500.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654557|dbj|BAI20484.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 356

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 12/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  L    A +   N+    +  + + A +E IH  +L+HDD+  +D+  +RRG 
Sbjct: 71  GGKRLRPLLTLAAARMCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDDSQLRRGL 128

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            + +  +    +++ G+ L   +F+I+++  +     I S    +L     +Q      M
Sbjct: 129 ASANAIFGNKASVLVGDFLFARSFQILTADASLGVMAILSAASATLAEGEVMQ------M 182

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D      Q   +   KT AL   ACESGA++  A+  ++E LR +G NLG+ FQL 
Sbjct: 183 TTQNDLSTSVEQYLQVIYGKTAALFAAACESGAVIGEATPEQREALRMYGANLGMAFQLV 242

Query: 225 DDLLDCEED 233
           DD LD   D
Sbjct: 243 DDALDYAAD 251


>gi|16126352|ref|NP_420916.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15]
 gi|13423600|gb|AAK24084.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15]
          Length = 338

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A L   ++    ++ AA+E IH  +L+HDD+  +D   +RRGK   H
Sbjct: 57  GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L   AFE++        +++++  +L+    +  +G +  Q++   
Sbjct: 115 LIWGGAQSVLVGDFLFARAFELMVE-----TNSMKALEILARASRVIAEGEVL-QLMRSH 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + +     I + KT  L   A E+GA+ A     + E LR +G NLG+ FQLADD L
Sbjct: 169 DLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|90109651|pdb|2FTZ|A Chain A, Crystal Structure Of Geranyltranstransferase (Ec 2.5.1.10)
           (Tm0161) From Thermotoga Maritima At 1.90 A Resolution
          Length = 284

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 79/184 (42%), Gaps = 8/184 (4%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A +GG +IR  LV        V     L V  A+E  H  SLIHDDLP +DN   RRG P
Sbjct: 42  ATVGGXRIRPLLVLTLGEDLGVEEEXLLDVAVAVELFHTASLIHDDLPPIDNADFRRGXP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + H  Y E  A++AG+GL   AF  IS           S+    L     +      + +
Sbjct: 102 SCHRTYGEDIALLAGDGLFFLAFSQISXIGNSXIFEEFSETAYXLLLGEAMDVEFERRXM 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           ++  E ++    F      TGAL  F   +  I+          +   GE  G+ FQ+ D
Sbjct: 162 EVSQEMVERMYAF-----XTGALFAFCFSAPFILXGXDHT---XMXLLGEXFGVAFQIYD 213

Query: 226 DLLD 229
           DL D
Sbjct: 214 DLXD 217


>gi|304311022|ref|YP_003810620.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
 gi|301796755|emb|CBL44967.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
          Length = 322

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  LV          H   LR+  A IE +H  +L+HDD+  +D   +RRG+ T 
Sbjct: 43  GGKRLRPLLVLLGGRAVGY-HKEDLRILAATIELLHTATLLHDDV--VDKSGLRRGRATA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + Q+    +++ G+ L + +FE++          I SQ    +     LQ      +  +
Sbjct: 100 NAQWGNAPSVLVGDYLYSRSFEMMVGLGNMPVMKILSQATRIMAEGEALQ------LSRV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     I + KT  L+  +  S A++A A+  E+  LR FGE+LGI FQL DD+
Sbjct: 154 RDVSTSEETYMQIIRSKTSVLLEASSHSAAVLASATDYERHALRGFGEHLGIAFQLIDDV 213

Query: 228 LDCEED 233
           LD   D
Sbjct: 214 LDFRGD 219


>gi|239947339|ref|ZP_04699092.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921615|gb|EER21639.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 326

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 103/182 (56%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A +F+      +++ +A+E IH  +L+HDD+  +D+  +RR KPT +
Sbjct: 43  GGKRIRPLLTIITAKMFDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +   T+I+ G+ L + +F+++ +  +     I++  +L+    I  +G +  Q++ + 
Sbjct: 101 IIWGSKTSILVGDFLFSQSFKLMIASGS-----IKAMNVLAKASAIISEGEVV-QLVKLN 154

Query: 169 DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +  I   + +  I K KT  L   +CE GAI+A    +  + ++ FG+ LG IFQ+ DDL
Sbjct: 155 ERRIITIEEYQQIVKSKTAELFGASCEVGAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDL 214

Query: 228 LD 229
           LD
Sbjct: 215 LD 216


>gi|325859901|ref|ZP_08173031.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
 gi|327312867|ref|YP_004328304.1| polyprenyl synthetase [Prevotella denticola F0289]
 gi|325482827|gb|EGC85830.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
 gi|326945844|gb|AEA21729.1| polyprenyl synthetase [Prevotella denticola F0289]
          Length = 326

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 18/221 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT 71
           + ID  LDD +    +H    H D LL  +   +    GK++R  L+   A  F      
Sbjct: 9   RPIDVELDDFI-DLFNHA-LDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGKVSEA 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                  +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+ +L+ A   +
Sbjct: 67  TQHAAVGLELLHTASLVHDDV--VDESAERRGQASVNADYDNKVAVLVGDYVLSTALLYV 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---DIQDEFIDETQVFMIQKMKTGAL 188
           S        +  S+ ++     +G Q +  G++L   +IQ + I E   + I + KT AL
Sbjct: 125 S--------HTHSEAIVRRLAGLG-QTLSDGEILQLSNIQCKDITEEAYYRIIERKTAAL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                  GA+ A AS+ E +  RCFG+NLGI+FQ+ DD+ D
Sbjct: 176 FEACAAIGAVSAGASEEEVDAARCFGKNLGIVFQIRDDIFD 216


>gi|303326545|ref|ZP_07356988.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
 gi|302864461|gb|EFL87392.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
          Length = 323

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 20/187 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A L          +   +E +H  +L+HDD+  +DN   RRGKP  H
Sbjct: 43  GGKRLRPLLVVLTARLLGYERADIYDLAVTMEMLHAATLLHDDV--LDNAASRRGKPAAH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +D    I+AG+ LL  A  +++    P+            LSL  +        G++L
Sbjct: 101 TIFDVTPTILAGDALLAQANALVAGFGDPR------------LSLCFSEATSRTAAGEIL 148

Query: 166 DIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +I  +   +T   +   I + KT  L+  +C+ GA+ A  +  + E    +GENLG+ FQ
Sbjct: 149 EIAAQRRVDTSAEEYAEIVRGKTAWLIRASCQLGALRAGGTDAQVEAAAAYGENLGMAFQ 208

Query: 223 LADDLLD 229
           + DD LD
Sbjct: 209 MVDDALD 215


>gi|254284097|ref|ZP_04959065.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B]
 gi|219680300|gb|EED36649.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B]
          Length = 321

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV            + +R  A +E IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 42  GGKRLRPLLVLLAGEALGGCTESHIRFSAVVEFIHTATLLHDDV--VDVSTLRRGRPTAN 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++     QL +    + M   T+ I    +L  Q+    
Sbjct: 100 EAFGNAPSVLVGDFLYTRAFQLM----VQLDNMDLLRHMADTTNTIAEGEVL--QLARAG 153

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  IDE+Q   +   KT  L   AC+  A++A+     ++ L  +G NLGI FQ+ DD+L
Sbjct: 154 NPDIDESQYIDVITRKTAILFASACQGAAMLANCDIKTQQALSQYGLNLGIAFQMIDDVL 213

Query: 229 DCEED 233
           D E D
Sbjct: 214 DYEGD 218


>gi|120553786|ref|YP_958137.1| farnesyltranstransferase [Marinobacter aquaeolei VT8]
 gi|120323635|gb|ABM17950.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Marinobacter aquaeolei VT8]
          Length = 322

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 99/185 (53%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +          L++ A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLASQAAGYQKDDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ L   AFE++   ++    N+ S     +     +Q      +++++
Sbjct: 101 AKWGNAPSVLVGDFLYARAFEMMVELQSLPIMNVLSHATAVIAEGEVMQ------LMNVK 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E Q  ++   KT  L   A  +GA++A AS+ ++  L+ +G++LG+ FQL DD+L
Sbjct: 155 NPDLSEDQYMVVIHNKTAMLFEAASHTGALLAKASKEQETALKDYGKHLGLAFQLVDDVL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYQGD 219


>gi|329113331|ref|ZP_08242112.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001]
 gi|326697156|gb|EGE48816.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001]
          Length = 356

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 12/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  L    A +   N+    +  + + A +E IH  +L+HDD+  +D+  +RRG 
Sbjct: 71  GGKRLRPLLTLAAARMCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDDSQLRRGL 128

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            + +  +    +++ G+ L   +F+I+++  +     I S    +L     +Q      M
Sbjct: 129 ASANAIFGNKASVLVGDFLFARSFQILTADASLGVMAILSAASATLAEGEVMQ------M 182

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D      Q   +   KT AL   ACESGA++  A+  ++E LR +G NLG+ FQL 
Sbjct: 183 TTQNDLSTSVDQYLQVIYGKTAALFAAACESGAVIGEATPEQREALRMYGANLGMAFQLV 242

Query: 225 DDLLDCEED 233
           DD LD   D
Sbjct: 243 DDALDYAAD 251


>gi|169827495|ref|YP_001697653.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
           sphaericus C3-41]
 gi|168991983|gb|ACA39523.1| Heptaprenyl diphosphate synthase component II [Lysinibacillus
           sphaericus C3-41]
          Length = 324

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 20/188 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A     +      V   +E IH  SL+HDD+  +D+  +RRG+PTV 
Sbjct: 46  GGKRIRPIFVLLGAKFGEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVK 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML---GGQML 165
            Q++   A+  G+ +   A E I    T+L+D         L H I  + M+    G+++
Sbjct: 104 AQWNNRVAMYTGDFIFARALEYI----TKLED--------PLVHQILARTMVEICNGEVI 151

Query: 166 DIQDEF-IDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            I+D+F +D+     F   K KT  L+  +CE GA+ A         L+ FG  +G+ FQ
Sbjct: 152 QIEDKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQ 211

Query: 223 LADDLLDC 230
           + DD+LD 
Sbjct: 212 IIDDVLDI 219


>gi|71083319|ref|YP_266038.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762251|ref|ZP_01264216.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|71062432|gb|AAZ21435.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91718053|gb|EAS84703.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 337

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 17/192 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R+ L    A L         + + A +E IH  +L+HDD+  +D G IRRGK T+
Sbjct: 55  GGKRLRALLTLGSAKLCGYTKGGRDINLAACVEMIHGATLMHDDV--IDLGNIRRGKKTL 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +   ++++ G+ LL+  FE++         NI    +LS T +   QG    ++L +
Sbjct: 113 NSIWGNHSSVLIGDYLLSRCFEMMVDD-----GNIEVLKLLSSTSSKIAQG----EVLQL 163

Query: 168 QD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           Q     + ++ET  F I   KT  L   A + GAI+++    EKE L  +G+NLG+ FQ+
Sbjct: 164 QHKGEVDMLEET-YFKIITAKTAELFSAATKVGAILSNKETKEKEALEFYGKNLGLTFQI 222

Query: 224 ADDLLDCEEDLP 235
           ADD LD   DL 
Sbjct: 223 ADDTLDYNSDLK 234


>gi|238918407|ref|YP_002931921.1| hypothetical protein NT01EI_0448 [Edwardsiella ictaluri 93-146]
 gi|238867975|gb|ACR67686.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 323

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          L + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAARTLGYQGDHHLTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRILALMSEATNVIAEGEVQ-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +  AI+A A   +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADPAQEQALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|193214123|ref|YP_001995322.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087600|gb|ACF12875.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 335

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 24/202 (11%)

Query: 45  YALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           Y L G GK++R  LV   A         AL +  ++E +H ++LIHDD+  MDN  +R G
Sbjct: 46  YILTGKGKRVRPVLVLLGAESICGTSDHALNLALSVEVLHNFTLIHDDI--MDNAALRHG 103

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           + TVH++++E  AI++G+ +L +A+E+     SS  T++ D I    ++          +
Sbjct: 104 RETVHLKWNENAAILSGDMMLAFAYELALKTNSSRLTKILDVITQSTIV----------I 153

Query: 160 LGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFG 214
             GQ  D+  +F   T V M + +     KTG L+  + E G + A A+  +   L  +G
Sbjct: 154 CEGQTYDM--DFEKRTDVTMSEYLDMISKKTGRLIAASLELGGLAAEATDEQLAILTEYG 211

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
           E +G  FQ+ DDLLD   D  K
Sbjct: 212 ELIGQAFQVQDDLLDIMADDKK 233


>gi|269137746|ref|YP_003294446.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202]
 gi|267983406|gb|ACY83235.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202]
 gi|304557803|gb|ADM40467.1| Octaprenyl-diphosphate synthase [Edwardsiella tarda FL6-60]
          Length = 323

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALGYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRILALMSEATNVIAEGEVQ-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +  AI+A A   +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADTAQEQALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|315022294|gb|EFT35322.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM]
          Length = 323

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 13/186 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V     LF  +   A++   AIE  H ++LIHDD+  MD   +RR KPT+H
Sbjct: 38  GGKRLRPIMVLMGCELFGGSLEKAMKPALAIEFFHNFTLIHDDI--MDGAPLRRNKPTIH 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I++G+ LL  A++     + +L    +   + S T  +    +  GQ +D+ 
Sbjct: 96  TLHGINVGILSGDALLIKAYQFFEDLEPELFK--KCITLFSETGAV----LCEGQQMDVN 149

Query: 169 DE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            E       E  + MI   KTG L   + + GA++A A++ E E L  FG+++GI FQ+ 
Sbjct: 150 FETNSNVTYEDYIKMIT-YKTGVLSAASFKIGAMIAGATEQEAEALYQFGKHIGIAFQIM 208

Query: 225 DDLLDC 230
           DD LD 
Sbjct: 209 DDYLDV 214


>gi|83952381|ref|ZP_00961112.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
 gi|83836054|gb|EAP75352.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
          Length = 333

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 9/209 (4%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + M ++H  R+     + +  GGK++R  L    A++         R+ A +E IH  +L
Sbjct: 31  ARMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAAICGYEGDHDERLAATVEFIHTATL 90

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D    RRG+PT ++ +D  ++++ G+ L + +F+++    +    +I +   
Sbjct: 91  LHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANAS 148

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            ++     LQ      +   +D    E     + + KT AL   A E G ++A AS    
Sbjct: 149 ATIAEGEVLQ------LTASRDIATTEATYLQVVRGKTAALFSAATEVGGVIAGASDEVT 202

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             L  +G+ LGI FQ+ADDLLD + D  K
Sbjct: 203 GALYDYGDALGIAFQIADDLLDFQGDSAK 231


>gi|220964307|gb|ACL95663.1| trans-isoprenyl diphosphate synthase [Caulobacter crescentus
           NA1000]
          Length = 322

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A L   ++    ++ AA+E IH  +L+HDD+  +D   +RRGK   H
Sbjct: 41  GGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAAH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L   AFE++        +++++  +L+    +  +G +  Q++   
Sbjct: 99  LIWGGAQSVLVGDFLFARAFELMVET-----NSMKALEILARASRVIAEGEVL-QLMRSH 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + +     I + KT  L   A E+GA+ A     + E LR +G NLG+ FQLADD L
Sbjct: 153 DLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDAL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|188582542|ref|YP_001925987.1| polyprenyl synthetase [Methylobacterium populi BJ001]
 gi|179346040|gb|ACB81452.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
          Length = 351

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L        A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 69  GGKRLRPILTLACADLCGYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 126

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 127 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 180

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G +++   + E+   R +G NLGI FQL DD+
Sbjct: 181 KNTETSEDEYLAVIRGKTAELFAAACEVGPVLSQRPEAEQAACRAYGMNLGIAFQLIDDV 240

Query: 228 LD 229
           LD
Sbjct: 241 LD 242


>gi|221640208|ref|YP_002526470.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131]
 gi|221160989|gb|ACM01969.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131]
          Length = 331

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 31  MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 90

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D  + RRGKPT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 91  DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 148

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           ++    LQ      +   QD    E     + + KT AL   A + G ++A   + + E 
Sbjct: 149 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATQVGGVVAGMPEAQVEA 202

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 203 LHAYGDALGIAFQIVDDLLD 222


>gi|294678700|ref|YP_003579315.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003]
 gi|77862362|gb|ABB04465.1| decaprenyl diphosphate synthase [Rhodobacter capsulatus]
 gi|294477520|gb|ADE86908.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003]
          Length = 333

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 33  MSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++        N+R   +L+
Sbjct: 93  DDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTD-----TGNMRVMEILA 145

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               +  +G +  Q+   Q+    E     + + KT AL   A E G I+  A +++ + 
Sbjct: 146 NASAVIAEGEVL-QLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPEDQVQA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LFDYGDALGIAFQIVDDLLD 224


>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
          Length = 205

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 2/136 (1%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT HI Y E  A++AG+ LL+++FE I++    +  +   + +  L   IG 
Sbjct: 1   NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGS 60

Query: 157 QGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++D+  E  D     +  I   KT AL+  +   GAIM   S  E E+LR F 
Sbjct: 61  EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120

Query: 215 ENLGIIFQLADDLLDC 230
            ++G++FQ+ DD+LD 
Sbjct: 121 RSIGLLFQVVDDILDV 136


>gi|218781076|ref|YP_002432394.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218762460|gb|ACL04926.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 325

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 21/194 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A +   N+   + +    E +H  +L+HDD+  +D    RRGK   H
Sbjct: 44  GGKRLRPVLMVLSARVCGCNNGEEINLSTVFEYLHAATLLHDDI--VDGAETRRGKIAAH 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG------LQGMLGG 162
             +D    ++ G+ LL+    I +       D  +  ++  +T+  G      +Q +L  
Sbjct: 102 KVWDPAEVVLTGDFLLSRTCTIAA-------DTDKLPIIKVITNVTGVMSEGEIQQLLNK 154

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           + LD+ +E     Q   +   KT  L+  ACE GA++A A   + E L+ +G +LGI FQ
Sbjct: 155 KRLDLSEE-----QYMDVIYRKTAVLISAACEVGALLADAPPEQVEALKEYGRHLGIAFQ 209

Query: 223 LADDLLDCEEDLPK 236
           +ADDLLD   D PK
Sbjct: 210 MADDLLDYVAD-PK 222


>gi|73666686|ref|YP_302702.1| trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake]
 gi|72393827|gb|AAZ68104.1| Trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake]
          Length = 325

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 13/202 (6%)

Query: 33  TQHNDR---LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           +QH+D+   L++ I + L+  GGK+IR  +      + N  +   + + AAIE IH  +L
Sbjct: 28  SQHSDKHIALITEIIHHLIKSGGKRIRPIIFFIICKMLNCTNENKILIAAAIEFIHNATL 87

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +I+ G+ LL  +F+ +   K     N+    +
Sbjct: 88  LHDDV--IDESDLRRGKKTSNFIWGNKASILVGDFLLAISFQWLIECK-----NLNILSI 140

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           LS T N  + G +  QML   +  I + +   I   KT +L    CES A +A  +  E 
Sbjct: 141 LSQTSNTIVVGEIQ-QMLSSHNINISKEKYIEIISAKTASLFGATCESAAHLAQVNLQES 199

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           + L+ FG N GI FQ+ DD+LD
Sbjct: 200 KALKSFGNNFGIAFQIMDDILD 221


>gi|310766238|gb|ADP11188.1| Octaprenyl diphosphate synthase [Erwinia sp. Ejp617]
          Length = 324

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLVTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+IR  +    A   N      H+T   V A IE IH  +L+HDD+  +D   +RRGK
Sbjct: 43  GGKRIRPMIAVLAARAINDYAGKQHIT---VAALIEFIHTATLLHDDV--VDESDMRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q+
Sbjct: 98  ATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QL 151

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  I E     +   KT  L   A +S AI+A AS+ E++ L+ +G  +G  FQL 
Sbjct: 152 MNCNDPDITEESYMRVIYSKTARLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLI 211

Query: 225 DDLLDCEED 233
           DDLLD   D
Sbjct: 212 DDLLDYSAD 220


>gi|259907026|ref|YP_002647382.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96]
 gi|224962648|emb|CAX54103.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96]
 gi|283476821|emb|CAY72659.1| octaprenyl diphosphate synthase [Erwinia pyrifoliae DSM 12163]
          Length = 324

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLVTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+IR  +    A   N      H+T   V A IE IH  +L+HDD+  +D   +RRGK
Sbjct: 43  GGKRIRPMIAVLAARAINDYAGKQHIT---VAALIEFIHTATLLHDDV--VDESDMRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q+
Sbjct: 98  ATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QL 151

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  I E     +   KT  L   A +S AI+A AS+ E++ L+ +G  +G  FQL 
Sbjct: 152 MNCNDPDITEESYMRVIYSKTARLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLI 211

Query: 225 DDLLDCEED 233
           DDLLD   D
Sbjct: 212 DDLLDYSAD 220


>gi|149378271|ref|ZP_01895982.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893]
 gi|149357436|gb|EDM45947.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893]
          Length = 322

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 104/185 (56%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +     N    L++ A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLSSRALGYNKDEHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ L   AFE++     +L+ N++   +LS    +  +G +  Q+++++
Sbjct: 101 ARWGNAPSVLVGDFLYARAFEMM----VELQ-NLKIMDVLSHATAVIAEGEVL-QLMNVK 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E +   +   KT  L   A  +GA++A A+ ++++ L  +G++LG+ FQL DD+L
Sbjct: 155 NPDVSEDKYMEVIHNKTAMLFEAASHTGALLAGANGSQEQALSAYGKHLGLAFQLVDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|300718598|ref|YP_003743401.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661]
 gi|299064434|emb|CAX61554.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661]
          Length = 323

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVNYTGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI+A A   +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILAEAVPEQEKALQDYGRFIGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|297787795|pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase
           From Rhodobacter Capsulatus
 gi|297787796|pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase
           From Rhodobacter Capsulatus
          Length = 341

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 33  MSSEHAPRIPEVTAHLIEAGGKRLRPMLTLAAARLVGYGGPFHVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++        N+R   +L+
Sbjct: 93  DDV--VDESRQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTD-----TGNMRVMEILA 145

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               +  +G +  Q+   Q+    E     + + KT AL   A E G I+  A +++ + 
Sbjct: 146 NASAVIAEGEVL-QLTAAQNLATTEDIYLRVIRGKTAALFSAATEVGGIIGGAPEDQVQA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LFDYGDALGIAFQIVDDLLD 224


>gi|160893232|ref|ZP_02074020.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50]
 gi|156865315|gb|EDO58746.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50]
          Length = 170

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 6/124 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           +KL+ ++K +  I+      T +  +      + +A+ Y+   GGK++R  L+ E   LF
Sbjct: 4   NKLELHTKEVQNII-----YTYAPAEEGFQKTIFTAMNYSFQAGGKRLRPLLMQETYRLF 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                      AAIE IH YSLIHDDLP++DN   RRG+ T H+ + E  AI+AG+ LL 
Sbjct: 59  GGTGKVVEPFMAAIEMIHTYSLIHDDLPALDNDEYRRGRKTSHVVFGEAMAILAGDALLN 118

Query: 126 YAFE 129
           YAFE
Sbjct: 119 YAFE 122


>gi|126653362|ref|ZP_01725466.1| HepT [Bacillus sp. B14905]
 gi|126589878|gb|EAZ84009.1| HepT [Bacillus sp. B14905]
          Length = 321

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 14/185 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A     +      V   +E IH  SL+HDD+  +D+  +RRG+PTV 
Sbjct: 43  GGKRIRPIFVLLGAKFGEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q++   A+  G+ +   A E I+  +  L   I ++ M+ + +         G+++ I+
Sbjct: 101 AQWNNRVAMYTGDFIFARALEYITKIEDPLVHQILARTMVEICN---------GEVIQIE 151

Query: 169 DEF-IDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+F +D+     F   K KT  L+  +CE GA+ A         L+ FG  +G+ FQ+ D
Sbjct: 152 DKFRLDQGLKDYFRRIKRKTALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQIID 211

Query: 226 DLLDC 230
           D+LD 
Sbjct: 212 DVLDI 216


>gi|242240764|ref|YP_002988945.1| octaprenyl diphosphate synthase [Dickeya dadantii Ech703]
 gi|242132821|gb|ACS87123.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech703]
          Length = 323

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLSS-----LRVLAVMSDAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI+A A    +  LR +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILADADTTCENALRDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|34581601|ref|ZP_00143081.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246]
 gi|28262986|gb|EAA26490.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246]
          Length = 327

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 124/227 (54%), Gaps = 20/227 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           K+Q++ K   T L++L++        + ++ L+  +   LL  GGK+IR  L    A +F
Sbjct: 6   KIQQDLKDEVTKLNNLIISC-----LKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 61  DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182
            +F+++ +  +     I++  +L+    I  +G +  Q++ + +     IDE Q   I K
Sbjct: 119 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVV-QLVKLNERRIITIDEYQ--QIVK 170

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   AC  GAI+A    +  + ++ FG+ LG IFQ+ DDLLD
Sbjct: 171 SKTAELFGTACAVGAIIAGQVDHISKDMQDFGKLLGTIFQVIDDLLD 217


>gi|89897810|ref|YP_514920.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56]
 gi|89331182|dbj|BAE80775.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56]
          Length = 290

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + + YAL  GGK+IR  LV   +    +N    L    AIE IH  +LI DDLP MD+  
Sbjct: 31  APVEYALTSGGKRIRPMLVCMFSKGLGMNR-DVLDSALAIEFIHTSTLIADDLPCMDDDD 89

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH------- 152
            RRG+PTVH  +DE +A++A   L+  A+  I S   +LK        +   +       
Sbjct: 90  ERRGRPTVHKAFDEASALLASYALIPAAYSRIRSNAKKLKSQGVDPREVDFAYDTISEIT 149

Query: 153 --NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             N G+ G+LGGQ  D+  +      V  I   KTGAL   AC SG +          ++
Sbjct: 150 DKNFGVNGVLGGQYEDMFFKNEGPEYVQSIINKKTGALFEIACASGWLFGGGDPLCVPQI 209

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             F +  G++FQ+ DD+LD  +D
Sbjct: 210 LEFSKTFGLLFQMKDDILDIHQD 232


>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
          Length = 219

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 4/148 (2%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIR 143
           SLIHDD+P MD+  +RRG+P+ H+ + E TA++AG+ L   AFE ++       +  +  
Sbjct: 2   SLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADRT 61

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAH 201
            + +  L    G  G+  GQ+ D + E +  +   +  I   KT  L+  A  SGAI+  
Sbjct: 62  LRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVGG 121

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
            +  E ER+R +   +G++FQ+ DD+LD
Sbjct: 122 GADAEVERVRRYARCVGLLFQVVDDVLD 149


>gi|271499159|ref|YP_003332184.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586]
 gi|270342714|gb|ACZ75479.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586]
          Length = 323

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI++ AS  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQSSAILSDASSEQELALQEYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|146278504|ref|YP_001168663.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556745|gb|ABP71358.1| Polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 333

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 33  MASKHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYEGPYHIHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D  + RRGKPT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 93  DDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVMDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           ++    LQ      +   QD    E     + + KT AL   A E G ++A   + +   
Sbjct: 151 ISEGEVLQ------LTAAQDLRTTEDIYLQVVRGKTAALFAAATEVGGVVAGVPEAQVAA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LHAYGDALGIAFQIVDDLLD 224


>gi|226946118|ref|YP_002801191.1| trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ]
 gi|226721045|gb|ACO80216.1| Trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ]
          Length = 322

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C +           + AAIE +H  +L+HDD+  +D+  +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGNALGKCDERMRLLAAAIEFLHTSTLLHDDV--VDDSELRRGRSTSN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L    FE++     +L      ++M   T  I    +L  Q+  ++
Sbjct: 101 ALWGNAPSVLVGDFLYARCFEML----VELASMPVMRIMSQATRVIAEGEVL--QLSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   A    A +A A+  + E LRCFG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEAASHGAASLAGATSEQAEALRCFGDSLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|300721522|ref|YP_003710797.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC
           19061]
 gi|297628014|emb|CBJ88563.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC
           19061]
          Length = 323

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +               ++V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAGKALQCGDEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AIYGNAASVLVGDFIYTRSFQMMTD-----LDSMRVLKLMSDATNVIAEGEVM-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  S AI+A+A+  ++  LR +G  LG  FQL DDLL
Sbjct: 155 DPDISEDDYMRVIYSKTARLFEVAAHSAAILANATPEQEIALRDYGCYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDSD 219


>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
          Length = 304

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 4/133 (3%)

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT H  Y E  AI+AG+ LL+ +FE I+     +  +   Q+++ +   +G +G++
Sbjct: 102 RRGKPTNHKVYGEEIAILAGDALLSLSFEYIARETRGVAADRVLQVIVEVGKAVGSEGLV 161

Query: 161 GGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            GQ +DI+ E   E+     +  I + KT  L+  A  SGAI+  A++ + +RLR +  +
Sbjct: 162 AGQAVDIKSEGAGESVGLDTLQYIHEHKTAVLLEAAVVSGAILGGATEVDVDRLRKYSRS 221

Query: 217 LGIIFQLADDLLD 229
           +G+ FQ+ DD+LD
Sbjct: 222 IGLAFQVVDDILD 234


>gi|300779369|ref|ZP_07089227.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
           35910]
 gi|300504879|gb|EFK36019.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
           35910]
          Length = 323

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 17/188 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V     +F  +   A++   AIE  H ++LIHDD+  MD   +RR KPT+H
Sbjct: 38  GGKRLRPIMVLMACEMFGGDLKEAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIH 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLD 166
             +     I++G+GL+  A++        L+  I    +   TH     G+L   GQ  D
Sbjct: 96  TLHGLNVGILSGDGLMLKAYKFFED----LEPEIFKACIRIFTHT----GLLLCEGQQYD 147

Query: 167 I----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           I    Q +   +  + MI   KTG L   + E GA++A A   + + +  FG+++GI FQ
Sbjct: 148 INFETQKDVTFDDYIRMIT-YKTGVLSASSFEIGALIAKADFKDAKAIFNFGKHIGIAFQ 206

Query: 223 LADDLLDC 230
           + DD LD 
Sbjct: 207 IMDDYLDV 214


>gi|238783532|ref|ZP_04627554.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970]
 gi|238715587|gb|EEQ07577.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970]
          Length = 323

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALHYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTS-----LESLRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|255264686|ref|ZP_05344028.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62]
 gi|255107021|gb|EET49695.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62]
          Length = 332

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 9/203 (4%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           A+ M ++H  R+     + +  GGK++R  L    A L   +    +++ A +E IH  +
Sbjct: 30  AARMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAQLCGYDGDNHIKLAATVEFIHTAT 89

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I +  
Sbjct: 90  LLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMVKTGSLRVLDILANA 147

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             ++     LQ      M   QD    E     I + KT AL   A + G +++ A +  
Sbjct: 148 AATIAEGEVLQ------MTAAQDLGTTEDTYLKIVRGKTAALFSAATQVGGVISDADETI 201

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            + L  +G+ LGI FQ+ DDLLD
Sbjct: 202 VKALYDYGDALGIAFQIVDDLLD 224


>gi|159045612|ref|YP_001534406.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12]
 gi|157913372|gb|ABV94805.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12]
          Length = 334

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 9/207 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L        + + A +E IH  +L+H
Sbjct: 34  MASEHAPRIPEVTAHLVEAGGKRLRPMLTLATARLCGYTGPYHVHLAATVEFIHTATLLH 93

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 94  DDV--VDESNQRRGRPTANLLWDNQSSVLVGDYLFARSFQLMVETGSLRVLDILANAAAT 151

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   QD   DE     + + KT AL   A E G ++A A + +   
Sbjct: 152 IAEGEVLQ------LSAAQDLATDEDIYLKVVRGKTAALFSAATEVGGVIAGADEAQVRA 205

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           L  +G+ LGI FQ+ DDLLD   D  K
Sbjct: 206 LFTYGDALGIAFQIVDDLLDYGGDSTK 232


>gi|292486819|ref|YP_003529689.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430]
 gi|292900783|ref|YP_003540152.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946]
 gi|291200631|emb|CBJ47763.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946]
 gi|291552236|emb|CBA19273.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430]
 gi|312170887|emb|CBX79146.1| octaprenyl diphosphate synthase [Erwinia amylovora ATCC BAA-2158]
          Length = 324

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLVTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+IR  +    A   N      H+T   V A IE IH  +L+HDD+  +D   +RRGK
Sbjct: 43  GGKRIRPMIAVLAARAINDYAGKQHIT---VAALIEFIHTATLLHDDV--VDESDMRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q+
Sbjct: 98  ATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QL 151

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  I E     +   KT  L   A +S AI+A AS  E++ L+ +G  +G  FQL 
Sbjct: 152 MNCNDPDITEESYMRVIYSKTARLFEAAAQSSAILAGASATEEQALQDYGRYIGTAFQLI 211

Query: 225 DDLLDCEED 233
           DDLLD   D
Sbjct: 212 DDLLDYSAD 220


>gi|87199374|ref|YP_496631.1| farnesyltranstransferase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135055|gb|ABD25797.1| Farnesyltranstransferase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 337

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L         ++ AA+E IH  +L+HDD+  +D   +RRGK T +
Sbjct: 56  GGKRMRPMLTLASAALLGYGGSRHYKLAAAVEFIHTATLLHDDV--VDGSDMRRGKKTAN 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I Y     ++ G+ L + +FE++         +++   +LS    +  +G +        
Sbjct: 114 IVYGNPATVLVGDFLFSRSFELMVE-----DGSLKVLRILSNASAVISEGEV-------- 160

Query: 169 DEFIDETQVFMIQKM-------KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D+ + + Q+   ++M       KT AL   AC   A++A     ++  L  +G NLGI F
Sbjct: 161 DQLVAQRQIDTTEEMYLDIIAAKTAALFSAACRIAAVVAERPDADELALDAYGRNLGIAF 220

Query: 222 QLADDLLDCEED 233
           QLADD +D + D
Sbjct: 221 QLADDAIDYDSD 232


>gi|157828600|ref|YP_001494842.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933313|ref|YP_001650102.1| decaprenyl diphosphate synthase [Rickettsia rickettsii str. Iowa]
 gi|157801081|gb|ABV76334.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908400|gb|ABY72696.1| farnesyl pyrophosphate synthetase [Rickettsia rickettsii str. Iowa]
          Length = 355

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 123/227 (54%), Gaps = 20/227 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           K+Q++ K   T L++L++        + ++ L+  +   LL  GGK+IR  L    A +F
Sbjct: 34  KIQQDLKDEVTKLNNLIISCL-----KSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 88

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 89  DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 146

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182
            +F+++ +  +     I++  +L+    I  +G +  Q++ + +     IDE Q   I K
Sbjct: 147 QSFKLMVASGS-----IKAMHVLAKASAIISEGEVV-QLVKLNERRIITIDEYQ--QIVK 198

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT  L   AC  G I+A    +  + ++ FG+ LG IFQ+ DDLLD
Sbjct: 199 SKTAELFGTACAVGTIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLD 245


>gi|215405436|ref|ZP_03417617.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis 02_1987]
 gi|289747226|ref|ZP_06506604.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289687754|gb|EFD55242.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
          Length = 359

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 21/187 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +  +A+    ++E +H +SL+HDDL  MD    RR +PTV  
Sbjct: 72  GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129

Query: 110 QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + +  A++AG+ +L+ A E++    SP         S+    L         + GQ  D
Sbjct: 130 LWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL---------IRGQAAD 180

Query: 167 IQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               F   T V +     + + KT ALM  + E GA++A A ++ +E L  +G ++G+ F
Sbjct: 181 TA--FESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAF 238

Query: 222 QLADDLL 228
           QL DDLL
Sbjct: 239 QLVDDLL 245


>gi|46203612|ref|ZP_00051268.2| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 312

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L    +   A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 30  GGKRLRPILTLACADLCGYGDGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 87

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 88  RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 141

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   + E+   R +G NLGI FQL DD+
Sbjct: 142 KNTETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPEAEQVACRAYGMNLGIAFQLIDDV 201

Query: 228 LD 229
           LD
Sbjct: 202 LD 203


>gi|15842992|ref|NP_338029.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31794579|ref|NP_857072.1| multifunctional dimethylallyltransferase/farnesyl diphosphate
           synthetase/ farnesyltranstransferase [Mycobacterium
           bovis AF2122/97]
 gi|57117104|ref|YP_177970.1| multifunctional dimethylallyltransferase/farnesyl diphosphate
           synthetase/ farnesyltranstransferase [Mycobacterium
           tuberculosis H37Rv]
 gi|121639323|ref|YP_979547.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663262|ref|YP_001284785.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           IdsA1 [Mycobacterium tuberculosis H37Ra]
 gi|148824606|ref|YP_001289360.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis
           F11]
 gi|167968716|ref|ZP_02550993.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis H37Ra]
 gi|215413305|ref|ZP_03421990.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215428901|ref|ZP_03426820.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis T92]
 gi|215447727|ref|ZP_03434479.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis T85]
 gi|218755177|ref|ZP_03533973.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis GM 1503]
 gi|219559472|ref|ZP_03538548.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis T17]
 gi|224991820|ref|YP_002646509.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800445|ref|YP_003033446.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 1435]
 gi|254234000|ref|ZP_04927325.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis C]
 gi|254366010|ref|ZP_04982055.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254552504|ref|ZP_05142951.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260188455|ref|ZP_05765929.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis CPHL_A]
 gi|260202524|ref|ZP_05770015.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T46]
 gi|260206765|ref|ZP_05774256.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis K85]
 gi|289444945|ref|ZP_06434689.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T46]
 gi|289449096|ref|ZP_06438840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289555674|ref|ZP_06444884.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 605]
 gi|289571635|ref|ZP_06451862.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T17]
 gi|289576131|ref|ZP_06456358.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis K85]
 gi|289752116|ref|ZP_06511494.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T92]
 gi|289759559|ref|ZP_06518937.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763581|ref|ZP_06522959.1| dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis GM
           1503]
 gi|294995828|ref|ZP_06801519.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis 210]
 gi|297636060|ref|ZP_06953840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 4207]
 gi|297733060|ref|ZP_06962178.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN R506]
 gi|298526881|ref|ZP_07014290.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans
           ferase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777739|ref|ZP_07416076.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu001]
 gi|306782466|ref|ZP_07420803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu002]
 gi|306786286|ref|ZP_07424608.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu003]
 gi|306790656|ref|ZP_07428978.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu004]
 gi|306795183|ref|ZP_07433485.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu005]
 gi|306799374|ref|ZP_07437676.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu006]
 gi|306805221|ref|ZP_07441889.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu008]
 gi|306809406|ref|ZP_07446074.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu007]
 gi|306969512|ref|ZP_07482173.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu009]
 gi|306973857|ref|ZP_07486518.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu010]
 gi|307081569|ref|ZP_07490739.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu011]
 gi|307086177|ref|ZP_07495290.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu012]
 gi|313660391|ref|ZP_07817271.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN V2475]
 gi|61224677|sp|P0A5H8|GGPPS_MYCTU RecName: Full=Probable geranylgeranyl pyrophosphate synthase;
           Short=GGPP synthase; Short=GGPPSase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|61224678|sp|P0A5H9|GGPPS_MYCBO RecName: Full=Probable geranylgeranyl pyrophosphate synthase;
           Short=GGPP synthase; Short=GGPPSase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|13883332|gb|AAK47843.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31620176|emb|CAD95619.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE
           IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL
           DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE
           (PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) +
           GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE)
           (FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL
           DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) +
           FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE
           SYNTHASE) [Mycobacterium bovis AF2122/97]
 gi|38490369|emb|CAE55595.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE
           IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL
           DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE
           (PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) +
           GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE)
           (FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL
           DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) +
           FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE
           SYNTHASE) [Mycobacterium tuberculosis H37Rv]
 gi|121494971|emb|CAL73457.1| Probable multifunctional geranylgeranyl pyrophosphate synthetase
           idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599529|gb|EAY58633.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis C]
 gi|134151523|gb|EBA43568.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148507414|gb|ABQ75223.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           IdsA1 [Mycobacterium tuberculosis H37Ra]
 gi|148723133|gb|ABR07758.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis
           F11]
 gi|224774935|dbj|BAH27741.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321948|gb|ACT26551.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417864|gb|EFD15104.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T46]
 gi|289422054|gb|EFD19255.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289440306|gb|EFD22799.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 605]
 gi|289540562|gb|EFD45140.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis K85]
 gi|289545389|gb|EFD49037.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T17]
 gi|289692703|gb|EFD60132.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T92]
 gi|289711087|gb|EFD75103.1| dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis GM
           1503]
 gi|289715123|gb|EFD79135.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496675|gb|EFI31969.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans
           ferase [Mycobacterium tuberculosis 94_M4241A]
 gi|308213915|gb|EFO73314.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu001]
 gi|308324859|gb|EFP13710.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu002]
 gi|308329115|gb|EFP17966.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu003]
 gi|308332952|gb|EFP21803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu004]
 gi|308336511|gb|EFP25362.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu005]
 gi|308340388|gb|EFP29239.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu006]
 gi|308344247|gb|EFP33098.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu007]
 gi|308348237|gb|EFP37088.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu008]
 gi|308352963|gb|EFP41814.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu009]
 gi|308356785|gb|EFP45636.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu010]
 gi|308360733|gb|EFP49584.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu011]
 gi|308364344|gb|EFP53195.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu012]
 gi|323717885|gb|EGB27074.1| multifunctional geranylgeranyl pyrophosphate synthetase id
           [Mycobacterium tuberculosis CDC1551A]
 gi|326905242|gb|EGE52175.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis W-148]
 gi|328460177|gb|AEB05600.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 4207]
          Length = 359

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 21/187 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +  +A+    ++E +H +SL+HDDL  MD    RR +PTV  
Sbjct: 72  GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129

Query: 110 QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + +  A++AG+ +L+ A E++    SP         S+    L         + GQ  D
Sbjct: 130 LWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL---------IRGQAAD 180

Query: 167 IQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               F   T V +     + + KT ALM  + E GA++A A ++ +E L  +G ++G+ F
Sbjct: 181 TA--FESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAF 238

Query: 222 QLADDLL 228
           QL DDLL
Sbjct: 239 QLVDDLL 245


>gi|332886110|gb|EGK06354.1| hypothetical protein HMPREF9456_00228 [Dysgonomonas mossii DSM
           22836]
          Length = 323

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 20/186 (10%)

Query: 50  GKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GK+IR  L+      C  + N+ +  A+ V    E +H  SLIHDD+  +D   IRRGK 
Sbjct: 45  GKRIRPILLLLAAKACGEINNITYNAAITV----ELLHTASLIHDDV--VDESKIRRGKA 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQ 163
           +++  YD   A++AG+  L+ A       K+ L  NI    ++S   ++G     G   Q
Sbjct: 99  SLNAIYDNKMAVLAGDYFLSTAL-----IKSVLTGNIE---IISNISDLGRDLAEGELNQ 150

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +  +++  IDE + F + K KT +LM      GAI  +AS+ E E+    GE  G+ FQL
Sbjct: 151 LSLVKELIIDEDEYFQVIKKKTASLMSVCMRIGAISVNASEEEIEKFTRLGELFGLCFQL 210

Query: 224 ADDLLD 229
            DD+ D
Sbjct: 211 RDDIFD 216


>gi|291557469|emb|CBL34586.1| farnesyl-diphosphate synthase [Eubacterium siraeum V10Sc8a]
          Length = 302

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 15/233 (6%)

Query: 2   NGGLPSKLQEN----SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSF 56
           +GG  +  +E      K++ T+ D      A +        L  A  Y+L  GGK+IR  
Sbjct: 12  DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYRA------LYDAASYSLEAGGKRIRPV 65

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L  E   +   +   A+    A+E IH +SLIHDDLP MD+  +RRG+P+ H  + E  A
Sbjct: 66  LAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDDMRRGRPSCHKAHGEAVA 125

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++AG+ L  YA + I    + L    ++ ++  L       GM+ GQ +D   +F     
Sbjct: 126 LLAGDALSAYAGKYICD--SDLPAEKKTAMIKELYDRT--LGMIEGQTIDTDGKFDTLDG 181

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  + +MKT  L+  A   G I A A + +    R +  ++G+ FQ+ DD+LD
Sbjct: 182 LLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILD 234


>gi|302390068|ref|YP_003825889.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200696|gb|ADL08266.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 326

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV      F+  +   +    A E IH  SLIHDD+  +D    RR +PT++
Sbjct: 47  GGKRLRPKLVLLSGLCFSPVNTKMIYSAVAAELIHTASLIHDDV--IDRSDYRRNRPTIN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDI 167
             Y   TA++AG+ +   AFE++           R  L   + + +  +Q M  G+++  
Sbjct: 105 YVYGNHTAVLAGDYIFAKAFEVLC----------RQNLNRCMGYLVEAIQEMCTGEIIQA 154

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   D  +DE + F   + KT +L+   C+SGA    A + + E++  FG  LG  FQ+ 
Sbjct: 155 RESPDLTVDEDRYFRTIEKKTASLIAACCKSGADCGKADEVQIEKMGLFGLYLGYAFQIV 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDILDITGD 223


>gi|215432365|ref|ZP_03430284.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis EAS054]
 gi|289755528|ref|ZP_06514906.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium
           tuberculosis EAS054]
 gi|289696115|gb|EFD63544.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium
           tuberculosis EAS054]
          Length = 359

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 21/187 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +  +A+    ++E +H +SL+HDDL  MD    RR +PTV  
Sbjct: 72  GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129

Query: 110 QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + +  A++AG+ +L+ A E++    SP         S+    L         + GQ  D
Sbjct: 130 LWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL---------IRGQAAD 180

Query: 167 IQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               F   T V +     + + KT ALM  + E GA++A A ++ +E L  +G ++G+ F
Sbjct: 181 TA--FESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAF 238

Query: 222 QLADDLL 228
           QL DDLL
Sbjct: 239 QLVDDLL 245


>gi|300174004|ref|YP_003773170.1| geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG
           18811]
 gi|299888383|emb|CBL92351.1| Geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG
           18811]
          Length = 332

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 16/200 (8%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSM 95
           D +  AIR  L  GK +R  L    + L + N+  +A+ +GA++E +H  +LIHDD+  +
Sbjct: 36  DEIDRAIRSQLNAGKLVRPALTLIFSQLSDQNYNKSAISLGASVELLHLATLIHDDV--I 93

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRG  ++  Q+ + TA+ AG+ LLT  F ++ S    + +       L+LT    
Sbjct: 94  DESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFSLLDSADKPVANK------LALT---A 144

Query: 156 LQGMLGGQMLDIQDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLR 211
           LQ +L G+++  Q+ + +D T    F   K KT AL   +   G + +     E  + + 
Sbjct: 145 LQEILFGELVQKQNRYNLDTTFPTYFSQIKGKTAALFKLSATFGLVSSKTYNTELLDTVS 204

Query: 212 CFGENLGIIFQLADDLLDCE 231
             GEN+GI FQL DD LD E
Sbjct: 205 KLGENIGITFQLLDDYLDFE 224


>gi|88706667|ref|ZP_01104370.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis
           KT71]
 gi|88699163|gb|EAQ96279.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis
           KT71]
          Length = 290

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 17/197 (8%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLP 93
           L +A+ +++  GG ++R  L   C ++   NH      A    A++E +HC SL+HDD+P
Sbjct: 28  LAAALHHSVFPGGARVRPKL---CLAVALANHCDAPALAAAAAASVELLHCASLVHDDMP 84

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             DN   RRG+ +VH  Y E  A++AG+ L+  AF +++ P+   K+ + SQLM  +   
Sbjct: 85  CFDNADERRGRQSVHTAYGEPIALLAGDALIVSAFALLARPQLPAKNRL-SQLMRVVAEG 143

Query: 154 IGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           +G   G+  GQ  +  +  +D   V +  + KTGAL      + A  A A+  +    + 
Sbjct: 144 VGAPCGIAAGQAWE-SEPVVD---VSLYHRAKTGALF---IAATAAGAAAAGVDVAPWKL 196

Query: 213 FGENLGIIFQLADDLLD 229
            G  +G  +Q+ADD+ D
Sbjct: 197 LGAKIGEAYQVADDIQD 213


>gi|225874396|ref|YP_002755855.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC
           51196]
 gi|225794389|gb|ACO34479.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC
           51196]
          Length = 329

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 22/222 (9%)

Query: 16  IDTILDDLL-----LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
            D + DDLL      +TA+  + Q    +   +R    GGK+IR  L+   A   +    
Sbjct: 13  FDLLHDDLLEIEREFETAAVSRVQVITEIAEYLREG--GGKRIRPLLLLLSARSQSYRGA 70

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A R+GA +E +H  +L+HDD+  +D   +RRG+P+ +  +     ++AG+ L   AF +
Sbjct: 71  GATRLGAVVEMVHTATLVHDDI--IDAADMRRGRPSPNTTWGNAKCVLAGDWLYMQAFRV 128

Query: 131 ISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGA 187
               +     N R   L++ LT     Q M+ G+++ ++     ++  + + +   KT  
Sbjct: 129 ALDER-----NFRVLDLLIGLT-----QQMVEGELMQLETLGRQVNSQEYYDLIYRKTAC 178

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L   +   GA++A A+  E+E +  +G NLG+ FQ+ DD+LD
Sbjct: 179 LFEVSMRLGAVLAKATDAEEECMGEYGRNLGLAFQIVDDVLD 220


>gi|153207271|ref|ZP_01946035.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212218206|ref|YP_002304993.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
 gi|120576759|gb|EAX33383.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212012468|gb|ACJ19848.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
          Length = 332

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  +V      C    +V H     +   IE IH  +L+HDD+  +D    RRG+
Sbjct: 52  GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + AF+I++      + N+    +L+ T N   +G +  Q+
Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  IDE   + + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ 
Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQII 220

Query: 225 DDLLDCEED 233
           DDLLD  +D
Sbjct: 221 DDLLDYSKD 229


>gi|271968156|ref|YP_003342352.1| geranylgeranyl pyrophosphate synthase-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270511331|gb|ACZ89609.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 346

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 92/191 (48%), Gaps = 17/191 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR  LV   A +       AL    A+E  H +SL+HDD+  MD    RR +PT  
Sbjct: 61  GGKAIRPALVLLAAEVVGGGAAAALPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAW 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +    AI+AG+ LLT AF+++++   P T     I S           +Q +L GQ  
Sbjct: 119 TVFGVSPAILAGDALLTLAFDVLAAGGHPATPRAARIFSA---------AIQELLEGQHT 169

Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  E    ++  +   +   KTGAL+  AC  GA+    S  + E L  FG +LG+ FQ
Sbjct: 170 DVAFERRQDVELAECLSMAAGKTGALLGCACALGALFGGGSLAQVEHLHAFGRDLGLAFQ 229

Query: 223 LADDLLDCEED 233
             DDLL    D
Sbjct: 230 FVDDLLGIWGD 240


>gi|77919579|ref|YP_357394.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380]
 gi|77545662|gb|ABA89224.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380]
          Length = 322

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L+  CA L   N      + + IE IH  +L+HDD+  +D   +RRG+   +
Sbjct: 41  GGKRIRPVLLLLCARLSGYNGEHRYPLASVIEFIHTATLLHDDV--VDGATLRRGQVAAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    A++ G+ L    FE++        D  R   +L+ T ++  QG +  Q+++  
Sbjct: 99  VTWGNDIAVLVGDYLFARCFEMM----VDFCDR-RIMQVLANTTSLMAQGEVV-QLINSG 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT AL    C   AI+   S  ++E L  FG +LG+ FQL DD L
Sbjct: 153 DLSLDEERYLSVVRSKTAALFSATCRCAAILGQLSAEKEEDLAGFGMHLGVAFQLVDDAL 212

Query: 229 DCEED 233
           D   D
Sbjct: 213 DYVAD 217


>gi|254483435|ref|ZP_05096664.1| polyprenyl synthetase superfamily protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036309|gb|EEB76987.1| polyprenyl synthetase superfamily protein [marine gamma
           proteobacterium HTCC2148]
          Length = 320

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A+ F       ++  A IE IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 41  GGKRLRPLLVLLTAAAFGRCGPDQIKFAAVIEFIHTATLLHDDV--VDISSLRRGRPTAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ L T AF+++     QL D      M + T+ I    +L  Q++   
Sbjct: 99  AEFGNAPSVLVGDFLYTRAFQLM----VQLGDMDILTHMANTTNTIAEGEVL--QLVRAG 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E Q   +   KT  L    C   A + H   +  + +  FG NLGI FQ+ DD+L
Sbjct: 153 NADTTEQQYLDVITRKTAILFAAGCYGAATLCHQESSVCQGMHSFGLNLGIAFQMIDDIL 212

Query: 229 DCEED 233
           D E D
Sbjct: 213 DYEGD 217


>gi|322436201|ref|YP_004218413.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163928|gb|ADW69633.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 329

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 20/221 (9%)

Query: 16  IDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72
           +D + DDLL ++    +Q+    ++++ I   L+  GGK+IR  L+   A        + 
Sbjct: 13  MDLLRDDLLAIEREFTVQSASPVQVITDIAEYLIAGGGKRIRPLLLLLSAKALGATSQSR 72

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R+GA +E +H  +L+HDD+  +D    RRG+P+ +  +     ++AG+ L   +F    
Sbjct: 73  IRLGAVVEMLHTATLVHDDI--IDEADTRRGRPSSNTAWGNSKCVLAGDWLYMQSF---- 126

Query: 133 SPKTQLKD-NIRS-QLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGAL 188
             +T L++ N     L+++LT     Q M+ G++L ++     I+E + F +   KT  L
Sbjct: 127 --RTALEERNFHVLDLLITLT-----QQMVEGELLQMEKLGHLINEEEYFDLIFRKTAFL 179

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              + + GA +  AS   +E+L  +G NLG+ FQ+ DD+LD
Sbjct: 180 FKVSMQLGAAIEGASDQTEEKLGEYGRNLGLAFQIVDDVLD 220


>gi|311897904|dbj|BAJ30312.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 337

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLAAQFGDPTAPGVVPSAVVVELTHLATLYHDDV--MDEAPVRRGAPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   AI+ G+ L + A +++S   T+    +R Q       +   + ++ GQ+L+  
Sbjct: 111 SRWDNSVAILTGDFLFSRASQVLSDLGTE---AVRIQ-------SDAFERLVTGQILETA 160

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               ++  +     +   KTG+L+  AC  G++MA A +   + L  +GE +G  FQLAD
Sbjct: 161 GPRPEDDPLRHYLDVISGKTGSLIAVACRFGSLMAGAERWIVDLLTQYGERIGTAFQLAD 220

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 221 DVLDIASD 228


>gi|167043297|gb|ABZ08002.1| putative polyprenyl synthetase [uncultured marine crenarchaeote
           HF4000_ANIW141M18]
          Length = 283

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 23/224 (10%)

Query: 14  KRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNH 69
           K+I+ +LD +L L T S  +          ++YAL GGK+IR     L +EC    + N 
Sbjct: 20  KKINNVLDSELELYTESEFK--------EPLKYALDGGKRIRPIILLLSSECVGEIDDNT 71

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           L A     AIE +H  S+IHDD+  +DN  +RR K   HI+Y    +++ G+ +L     
Sbjct: 72  LAA---ACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNISVLTGDFVLGLILN 126

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I S       +N R    L+ T  +  +G +    L+  ++   +  + +I+  KT    
Sbjct: 127 IASRI-----NNPRVTKNLATTAMMMSEGEVIESRLEASEDVTFDDYLKVIE-YKTATAF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A   GAI++  ++ E E L  +G+N+GI +Q+ DDLLD + +
Sbjct: 181 ETASRLGAIISEGTEEEIESLADYGKNIGIAYQIRDDLLDWQNE 224


>gi|291531063|emb|CBK96648.1| farnesyl-diphosphate synthase [Eubacterium siraeum 70/3]
          Length = 302

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 5/192 (2%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A  Y+L  GGK+IR  L  E   +   +   A+    A+E IH +SLIHDDLP MD+
Sbjct: 47  LYDAASYSLEAGGKRIRPVLAFEMCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDD 106

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+P+ H  + E  A++AG+ L  YA + I       +   +   M+   ++  L 
Sbjct: 107 DDMRRGRPSCHKAHGEAVALLAGDALSAYAGKYICDSNLSAE---KKTAMIKELYDRTL- 162

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GM+ GQ +D   +F     +  + +MKT  L+  A   G I A A + +    R +  ++
Sbjct: 163 GMIEGQTIDTDGKFDTLDGLLSMYEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDV 222

Query: 218 GIIFQLADDLLD 229
           G+ FQ+ DD+LD
Sbjct: 223 GLAFQIVDDILD 234


>gi|229543999|ref|ZP_04433058.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans
           36D1]
 gi|229325138|gb|EEN90814.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans
           36D1]
          Length = 320

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 119/228 (52%), Gaps = 21/228 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S L+ + + I+  L + +   A+ +Q Q ++ LL A      GGK+IR   V   A  
Sbjct: 6   LYSFLKTDIELIEQELANAVASNAALIQ-QASESLLKA------GGKRIRPVFVLLGAKF 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +        V  A+E IH  SL+HDD+  +D+  +RRGKPTV  ++D   A+  G+ +L
Sbjct: 59  GDYEIERVKNVAVALELIHMASLVHDDV--IDDAELRRGKPTVKAKWDNRIAMYTGDYIL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ- 181
             A E I    T+++D    Q++      + +     G++  I+D+  F    + ++ + 
Sbjct: 117 ATALEYI----TKVEDLSAHQILADTLVEVCV-----GEIEQIKDKYRFHQNLRCYLRRI 167

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K KT  L+  +C+ GAI + A +N   +L  FG N+G+ +Q+ DD+LD
Sbjct: 168 KRKTALLIAASCQLGAIASGADENIHRQLYRFGYNVGMSYQIIDDILD 215


>gi|165918704|ref|ZP_02218790.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
 gi|165917639|gb|EDR36243.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
          Length = 332

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  +V      C    +V H     +   IE IH  +L+HDD+  +D    RRG+
Sbjct: 52  GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + AF+I++      + N+    +L+ T N   +G +  Q+
Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  IDE   + + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ 
Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQII 220

Query: 225 DDLLDCEED 233
           DDLLD  +D
Sbjct: 221 DDLLDYSKD 229


>gi|29653729|ref|NP_819421.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493]
 gi|161831382|ref|YP_001596323.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
 gi|29540992|gb|AAO89935.1| farnesyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
 gi|161763249|gb|ABX78891.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
          Length = 332

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  +V      C    +V H     +   IE IH  +L+HDD+  +D    RRG+
Sbjct: 52  GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + AF+I++      + N+    +L+ T N   +G +  Q+
Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  IDE   + + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ 
Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQII 220

Query: 225 DDLLDCEED 233
           DDLLD  +D
Sbjct: 221 DDLLDYSKD 229


>gi|329765834|ref|ZP_08257400.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137677|gb|EGG41947.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 283

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 10/196 (5%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
            +  +RY+L GGK+IR  +++  A          L    A+E +H  S+IHDD+  +DN 
Sbjct: 38  FIEPLRYSLEGGKRIRPIILSLAAESVGKIDDNTLAASCAVEFLHMESIIHDDI--IDNE 95

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RR +   HI+Y   T+++ G+ +L     I S       DN R    L+ T  +  +G
Sbjct: 96  TMRRQREPFHIKYGYNTSVLTGDFVLGLILAISSRL-----DNARITKDLATTAMLMSEG 150

Query: 159 -MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            M+  ++   +D   D+     + + KT      A   GAI+A  S+ E E L  +G+N+
Sbjct: 151 EMIESRLESSEDVTFDD--YLKVIEYKTATAFEVAARIGAIIASGSEEEIEALTEYGKNI 208

Query: 218 GIIFQLADDLLDCEED 233
           GI +Q+ DDLLD + +
Sbjct: 209 GIAYQIRDDLLDWKNE 224


>gi|219669361|ref|YP_002459796.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539621|gb|ACL21360.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 331

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L  + A  F   +  AL    A E IH  SLIHDD+  +D+   RRG PT++
Sbjct: 52  GGKRLRPLLTLQSAQCFGPLNSAALDAAVAAELIHMASLIHDDV--IDHSDRRRGIPTIN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDI 167
            Q     A++AG+ +   AF I+++            L+ S+++ +  +Q M  G++   
Sbjct: 110 SQRGNQVAVLAGDYVFAEAFRILAN----------KHLLTSMSYLVDAIQSMCDGEVQQA 159

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   D  ++ +Q F     KTG L+   C SGA  A A+Q   E L  +G NLG  +Q+ 
Sbjct: 160 EQRCDLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQKAVEALGQYGMNLGYAYQII 219

Query: 225 DDLLD 229
           DD+LD
Sbjct: 220 DDILD 224


>gi|294634497|ref|ZP_06713032.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685]
 gi|291092011|gb|EFE24572.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685]
          Length = 323

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALHYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLQS-----LRILELMSAATNVIAEGEVM-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +  AI+A A  +++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADTHQELALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|254516949|ref|ZP_05129007.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3]
 gi|219674454|gb|EED30822.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3]
          Length = 320

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   ++         +   A +E IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 41  GGKRLRPVLVLLSSAALGPISDAQIHFAAVVEFIHTATLLHDDV--VDVSELRRGRPTAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++ +    L ++   ++M   T+ I    +L  Q++   
Sbjct: 99  SAFGNAPSVLVGDFLYTRAFQLMVA----LGNHDVLKMMADTTNTIAAGEVL--QLIRAG 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E Q + +   KT AL    CE  A++A A     E+LR  G ++GI FQL DDLL
Sbjct: 153 DAATSEEQYYDVIDRKTAALFAAGCEGAALLAGADAARVEQLRVCGRSIGIAFQLIDDLL 212

Query: 229 DCEED 233
           D E D
Sbjct: 213 DYEGD 217


>gi|154706037|ref|YP_001425022.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway
           5J108-111]
 gi|154355323|gb|ABS76785.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway
           5J108-111]
          Length = 332

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  +V      C    +V H     +   IE IH  +L+HDD+  +D    RRG+
Sbjct: 52  GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + AF+I++      + N+    +L+ T N   +G +  Q+
Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  IDE   + + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ 
Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQII 220

Query: 225 DDLLDCEED 233
           DDLLD  +D
Sbjct: 221 DDLLDYSKD 229


>gi|212213122|ref|YP_002304058.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011532|gb|ACJ18913.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
          Length = 332

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  +V      C    +V H     +   IE IH  +L+HDD+  +D    RRG+
Sbjct: 52  GGKRLRPLVVLLTARACGYEQDVEHQ---ELATVIEFIHTATLLHDDV--VDKSTQRRGQ 106

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + AF+I++      + N+    +L+ T N   +G +  Q+
Sbjct: 107 KTANALWGNSASVLVGDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QL 160

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  IDE   + + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ 
Sbjct: 161 MNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQII 220

Query: 225 DDLLDCEED 233
           DDLLD  +D
Sbjct: 221 DDLLDYSKD 229


>gi|91201536|emb|CAJ74596.1| similar to geranylgeranyl pyrophosphate (GGPP) synthetase
           [Candidatus Kuenenia stuttgartiensis]
          Length = 327

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 19/231 (8%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
           G+   ++    +ID +L +L+            + L   I Y +   GK++R  +     
Sbjct: 2   GIEDSIRTYGAKIDDMLRELI-------PVDEENYLSEPIWYHMNTKGKRVRPAICLITC 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N   AL    AIE +H   L+HDD+   D   +RR +PTV ++Y    AI AG+ 
Sbjct: 55  EALGGNPENALSFALAIEVLHNMFLMHDDIEDGDT--VRRDQPTVWVKYGTANAINAGDY 112

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
           LL  A++  ++SP    K   R +L+ +LT   G    + GQ LDI     +   V    
Sbjct: 113 LLACAYKSTLASPVAPEK---RLKLLEALTLTYG--KTVEGQALDINARAAESFTVAAYM 167

Query: 182 KM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KM   KTG  +      GAI+A AS    E++   G+N+G  FQ+ DDL+D
Sbjct: 168 KMVELKTGYYLACGMVGGAIVAGASNEVVEKIWMLGKNMGPAFQIRDDLID 218


>gi|238797569|ref|ZP_04641066.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969]
 gi|238718566|gb|EEQ10385.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969]
          Length = 323

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALHYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTG-----LESLRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A+AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLANASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|295688727|ref|YP_003592420.1| trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756]
 gi|295430630|gb|ADG09802.1| Trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756]
          Length = 341

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 13/186 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK++R  L    A L   +   +     L++ AA+E IH  +L+HDD+  +D   +RRG
Sbjct: 55  GGKRLRPLLTVAAARLAASDGAGSDNDHCLKLAAAVEFIHTATLLHDDV--VDGSALRRG 112

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           K   H+ +    +++ G+ L   AFE++        +++++  +L+    +  +G +  Q
Sbjct: 113 KVAAHLIWGGAQSVLVGDFLFARAFELMVE-----TNSMKALEILARASRVIAEGEVM-Q 166

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           ++   D  + +     I + KT  L   A E+GA+ A   Q   + L+ +G NLG+ FQL
Sbjct: 167 LMRSHDLNLSQALYLEIIQAKTAELFAAASEAGAVSAGVDQTRADALKAYGLNLGLAFQL 226

Query: 224 ADDLLD 229
            DD LD
Sbjct: 227 VDDALD 232


>gi|261820112|ref|YP_003258218.1| octaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163]
 gi|261604125|gb|ACX86611.1| Trans-hexaprenyltranstransferase [Pectobacterium wasabiae WPP163]
          Length = 323

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     +    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALAYDGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S      +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----LESLRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|89894958|ref|YP_518445.1| hypothetical protein DSY2212 [Desulfitobacterium hafniense Y51]
 gi|89334406|dbj|BAE84001.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 326

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L  + A  F   +  AL    A E IH  SLIHDD+  +D+   RRG PT++
Sbjct: 47  GGKRLRPLLTLQSAQCFGPLNSAALDAAVAAELIHMASLIHDDV--IDHSDRRRGIPTIN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDI 167
            Q     A++AG+ +   AF I+++            L+ S+++ +  +Q M  G++   
Sbjct: 105 SQRGNQVAVLAGDYVFAEAFRILAN----------KHLLTSMSYLVDAIQSMCDGEIQQA 154

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   D  ++ +Q F     KTG L+   C SGA  A A+Q   E L  +G NLG  +Q+ 
Sbjct: 155 EQRCDLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQEAVEALGQYGMNLGYAYQII 214

Query: 225 DDLLD 229
           DD+LD
Sbjct: 215 DDILD 219


>gi|289209165|ref|YP_003461231.1| trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix]
 gi|288944796|gb|ADC72495.1| Trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix]
          Length = 322

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L T  A    V     + + A +E IH  +L+HDD+  +D   +RRG  T +
Sbjct: 43  GGKRLRPLLATLSARACAVEGDEPVVLAAVVEFIHTATLLHDDV--VDASEMRRGNETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L + AFE++    +     +R   +L+   N+  +G +  Q+++  
Sbjct: 101 HIFGNEAAVLVGDFLYSRAFEMMVEVGS-----MRVMEILAHATNVIAEGEVM-QLMNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   AC+ GAI+    + E+E L  +G +LG  FQL DD+L
Sbjct: 155 DADVDEARYMNVIQSKTAKLFEAACQLGAILGERPRAEEESLAHYGMHLGTAFQLIDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|298293858|ref|YP_003695797.1| trans-hexaprenyltranstransferase [Starkeya novella DSM 506]
 gi|296930369|gb|ADH91178.1| Trans-hexaprenyltranstransferase [Starkeya novella DSM 506]
          Length = 340

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L       A+++ A++E +H  +L+HDD+  +D+  +RRGK    
Sbjct: 59  GGKRLRPMLTLATAALSGYEGDGAVKLAASVEFMHTATLLHDDV--VDDSEMRRGKLAAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   +
Sbjct: 117 MLWGNEASVLVGDFLLGQAFRMMIEVGS-----MRALDILSTAAVVIAEGEVA-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L   ACE G ++A   + E    R +G NLGI FQL DD L
Sbjct: 171 NIATDEDAYLAVIRGKTAELFAAACEVGPVLAGRPEAEMAAARAYGMNLGIAFQLVDDAL 230

Query: 229 D 229
           D
Sbjct: 231 D 231


>gi|29840764|ref|NP_829870.1| geranyltranstransferase [Chlamydophila caviae GPIC]
 gi|29835114|gb|AAP05748.1| geranyltranstransferase [Chlamydophila caviae GPIC]
          Length = 293

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 104/203 (51%), Gaps = 11/203 (5%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + + YAL  GGK+IR  LV   A   +++    L    AIE IH  +LI DDLP MD+  
Sbjct: 34  APVEYALTSGGKRIRPMLVCMIAKGLDMSR-DVLDAALAIEFIHTSTLIADDLPCMDDDD 92

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151
            RRG+PTVH  +DE +A++A   L+  A+  I     +LK         +I   ++  +T
Sbjct: 93  ERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSQGVDPKEVDIAYDIISDVT 152

Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             N G+ G+LGGQ  D+  +      V  I   KTGAL   AC SG +          ++
Sbjct: 153 DKNFGVNGVLGGQYEDMFFKNDGPEYVQSIINKKTGALFEIACVSGWLFGGGDPLCVPQI 212

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             F +  G++FQ+ DD+LD  +D
Sbjct: 213 IEFSQTFGLLFQMKDDILDIHQD 235


>gi|74316881|ref|YP_314621.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056376|gb|AAZ96816.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC
           25259]
          Length = 343

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F         + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 64  GGKRLRPALVLLSAGCFGYRGQAHHELAAVVEFIHTATLLHDDV--VDESELRRGRETAN 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        DN+    +LS   N   +G +  Q+L+  
Sbjct: 122 ALFGNAASVLVGDFLYSRAFQMMVGV-----DNMEVMRILSDATNTIAEGEVL-QLLNCH 175

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  IDE     + + KT  L   A   GA++   S+ +K+ L  +G +LG  FQL DD+L
Sbjct: 176 DPDIDEENYLRVIRYKTAKLFEAAGRLGAVIGGGSEADKDALARYGMHLGTAFQLIDDVL 235

Query: 229 DCEEDLPK 236
           D   D  K
Sbjct: 236 DYSGDFLK 243


>gi|296284709|ref|ZP_06862707.1| geranylgeranyl pyrophosphate synthase [Citromicrobium bathyomarinum
           JL354]
          Length = 340

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   N     ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 59  GGKRLRPMLTLAGAELVGYNGTRHHKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAAN 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +     ++ G+ L + AFE+++        +++   +LS    I  +G +  Q+   +
Sbjct: 117 IIFGNPATVLVGDFLFSRAFELMTE-----DGSLKVLKILSSASAIIAEGEVA-QLTSQR 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E +   I   KT AL   A    A++A  S  E++ L  +G NLGI FQL DD L
Sbjct: 171 KITTSEQRYLDIIGSKTAALFAAASRIAAVVAECSDAEEQALDDYGRNLGIAFQLVDDAL 230

Query: 229 DCEED 233
           D   D
Sbjct: 231 DYSSD 235


>gi|304393457|ref|ZP_07375385.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130]
 gi|303294464|gb|EFL88836.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130]
          Length = 338

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +        + + A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 57  GGKRLRPMLTLSAARMLGYTGDHHVTLAASVEFMHTATLLHDDV--VDESDMRRGKQSAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S   + +     +Q      M   +
Sbjct: 115 MVWGNQASVLVGDFLLGQAFRMMVDAGSMEALDVLSTASMVIAEGEVMQLSAAQSMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   ACE G I+A A +  ++ LR +G NLG+ FQL DD L
Sbjct: 175 DDYM------AVIRGKTAALFSAACEVGPILADAGKPARDALRSYGLNLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|256822892|ref|YP_003146855.1| polyprenyl synthetase [Kangiella koreensis DSM 16069]
 gi|256796431|gb|ACV27087.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069]
          Length = 323

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A   N        + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 44  GGKRLRPMLLLLAAKSLNYQGKFHPNLAAVIELIHTATLLHDDV--VDESDLRRGRQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++          +R   +LS T N    G +  Q++++ 
Sbjct: 102 AMFGNQASVLVGDYLYSRSFQMMVEVG-----EMRVMEVLSETTNEVAAGEVL-QLMNVN 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE   + + + KT  L   A +  AI+A AS++ +E LR +G  LG  FQL DD L
Sbjct: 156 DPDVDEASYYQVIERKTAILFAAATQLAAILAGASKDVEEGLREYGLQLGNAFQLVDDAL 215

Query: 229 DCEED 233
           D   D
Sbjct: 216 DYAAD 220


>gi|119502964|ref|ZP_01625049.1| Conserved hypothetical phage tail region protein [marine gamma
           proteobacterium HTCC2080]
 gi|119461310|gb|EAW42400.1| Conserved hypothetical phage tail region protein [marine gamma
           proteobacterium HTCC2080]
          Length = 321

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS      L+ ++  A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 42  GGKRLRPLLALLAASAQGGVDLSDIKFAAVVEFIHTATLLHDDV--VDLSSLRRGRATAN 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF+++     +L D    Q M   T+ I    +L  Q++   
Sbjct: 100 AEFGNAPSVLVGDFIYTRAFQLM----VKLGDLSLLQSMADTTNTIAAGEVL--QLMRAG 153

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E+Q   +   KT AL   AC   AI+      ++E++  +G +LGI FQ+ DD+L
Sbjct: 154 DPSVTESQYLDVIDRKTAALFAAACRGSAILKGRDTTQQEQMAAYGRHLGIAFQMIDDVL 213

Query: 229 DCEED 233
           D   D
Sbjct: 214 DYTGD 218


>gi|161527795|ref|YP_001581621.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339096|gb|ABX12183.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
          Length = 283

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 15/218 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           K+ID  LD         +        +  ++Y+L GGK+IR  ++T  A           
Sbjct: 20  KKIDQALD-------KELDLYSESEFIEPLKYSLEGGKRIRPIILTLSAESIGKVDDNTF 72

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E +H  S+IHDD+  +DN  +RR K   HI+Y   T+++ G+ +L     + S 
Sbjct: 73  AASCAVEFLHMESIIHDDI--IDNETMRRQKDPFHIKYGYNTSVLTGDFVLGLILAVCSR 130

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 DN R    L+ T  +  +G +    L+  ++   +  + +I+  KT      A 
Sbjct: 131 L-----DNPRITKDLATTAMLMSEGEMIENRLETSEDVTFDDYLKVIE-YKTATAFEVAA 184

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +GAI+A+ ++ + E L  +G+N+GI +Q+ DDLLD +
Sbjct: 185 RTGAIIANGTEEQIEGLTEYGKNIGIAYQIRDDLLDWK 222


>gi|153007864|ref|YP_001369079.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151559752|gb|ABS13250.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 356

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 75  GGKRLRPMMTLAAARMFGYEGDGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTAR 132

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +    ++ +     +     +Q      M   +
Sbjct: 133 MIWGNQASVLVGDFLLGQAFKMMVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTE 192

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 193 DEYL------AVIKAKTAALFSAAGEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 246

Query: 229 D 229
           D
Sbjct: 247 D 247


>gi|304396333|ref|ZP_07378214.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB]
 gi|308189085|ref|YP_003933216.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1]
 gi|304355842|gb|EFM20208.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB]
 gi|308059595|gb|ADO11767.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1]
          Length = 323

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLSARAMGYKGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S       ++R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----MGSLRILALMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI+A A+  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPEEEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|126728318|ref|ZP_01744134.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Sagittula stellata E-37]
 gi|126711283|gb|EBA10333.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Sagittula stellata E-37]
          Length = 325

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 9/201 (4%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            M ++H  R+     + +  GGK++R  L    A L   +    + + A +E IH  +L+
Sbjct: 25  RMASRHAPRIPEVTAHLVEAGGKRLRPMLTLASAKLCGYDGPYHVHLAATVEFIHTATLL 84

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++        N+R   +L
Sbjct: 85  HDDV--VDESERRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTE-----TGNLRVLRIL 137

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           S       +G +  Q+   QD    E     + + KT AL   A E G ++A   + +  
Sbjct: 138 SDAAATIAEGEVL-QLTAAQDLSTTEDIYLQVVRGKTAALFSAATEVGGVIAGRPEEDVR 196

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  +G+ LGI FQ+ DDLLD
Sbjct: 197 ALFDYGDALGIAFQIVDDLLD 217


>gi|255534882|ref|YP_003095253.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341078|gb|ACU07191.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
           3519-10]
          Length = 323

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 17/188 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V     +F  +   A++   AIE  H ++LIHDD+  MD   +RR KPT+H
Sbjct: 38  GGKRLRPIMVLMANDMFGGDIQKAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIH 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGML--GGQML 165
             +     I++G+ LL  +++     + +L K  IR       TH     G+L   GQ  
Sbjct: 96  TLHGLNAGILSGDALLLKSYKFFEDLEPELFKACIRV-----FTHT----GLLLCEGQQY 146

Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           DI  E + +       +M   KTG L   + E GA++A +   + + +  FG+NLGI FQ
Sbjct: 147 DINFETLGDVTFNDYIRMITYKTGVLTASSFEIGALIAGSDFKDAKAIFNFGKNLGIAFQ 206

Query: 223 LADDLLDC 230
           + DD LD 
Sbjct: 207 IMDDYLDV 214


>gi|268323767|emb|CBH37355.1| putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           (GGPS) [Includes: Dimethylallyltranstransferase ;
           Geranyltranstransferase ; Farnesyltranstransferase ]
           [uncultured archaeon]
          Length = 357

 Score = 85.1 bits (209), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 33/231 (14%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVT--ECASLFNVNHLTALRVGAA 78
           D  ++ AS +     + +++   Y L GGK++R  FL+   +C +  N++ +  +    +
Sbjct: 25  DEKIEEASKISDYTQEVVVNIKEYTLRGGKRLRPIFLIYGYKCITEDNIDAI--IEASIS 82

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNG 122
           IE +  Y LIHDD+  MD   +RRGKPT HI+Y+ +                 AI+AG+ 
Sbjct: 83  IELMQSYLLIHDDI--MDEDELRRGKPTFHIEYENICATLFGDDDTRKFGENIAILAGDL 140

Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
           L  Y  +++++ + + +   R+ Q    +  N+G      GQ+LDI  E    I E ++ 
Sbjct: 141 LEAYGIDVLTNSRFKEEYITRALQKYAEIVKNVGY-----GQILDIMSEKKKDITEAEIL 195

Query: 179 MIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            I K+KT +       + GAI+A A + +   +  +G  LG+ FQ+ DD+L
Sbjct: 196 RIHKLKTASYTIENPLQIGAILAGAVEADLAVMSNYGLPLGLAFQIQDDIL 246


>gi|320354672|ref|YP_004196011.1| poluprenyl synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123174|gb|ADW18720.1| Polyprenyl synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 338

 Score = 85.1 bits (209), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 9/188 (4%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + YAL  GGK+IR  L   C+     +     ++ AA E +H  +L+HDD+  +D    R
Sbjct: 46  VHYALFNGGKRIRPLLTVLCSRCCGRDDAELYQLAAAFEYLHVATLVHDDV--IDRAEQR 103

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG PTV  ++    AI+AG+ L  ++  +I          I  Q   S+ +    Q  L 
Sbjct: 104 RGTPTVVARHGLTAAILAGDWLHAHSMHLIGKLAGGRGLEIFCQATASMVNGEFAQLRLI 163

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           G +         E Q F + + KTG L+   C  GA+ A A +  +  L  +G+ +G  F
Sbjct: 164 GDITGT------EQQYFEVIRQKTGNLIRSTCSIGALFAGADEARRTALATYGDRIGAAF 217

Query: 222 QLADDLLD 229
           Q+ DDLLD
Sbjct: 218 QVVDDLLD 225


>gi|307129369|ref|YP_003881385.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937]
 gi|306526898|gb|ADM96828.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937]
          Length = 323

 Score = 85.1 bits (209), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLTARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI++ AS  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQASAILSGASSEQELALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|224588345|gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10]
          Length = 348

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A+ ++        + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 69  GGKRIRPVLVLLVANAYSYKGTAHHELAAVVEFIHTATLLHDDV--VDESSLRRGRATAN 126

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        +N+R   +LS   N+  +G +  Q+L++ 
Sbjct: 127 ALFGNAASVLVGDFLYSRAFQMMVG-----LNNMRVMQILSDATNVIAEGEVL-QLLNMH 180

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + + +   + + KT  L   A E GA+++ A+  + E    +G +LG  FQL DD+L
Sbjct: 181 DPDVSQERYLQVIRSKTAKLFEAAAELGALVSGANDAQIEAAGEYGRSLGTAFQLIDDVL 240

Query: 229 DCEED 233
           D   D
Sbjct: 241 DYAGD 245


>gi|83311261|ref|YP_421525.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
           AMB-1]
 gi|82946102|dbj|BAE50966.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 339

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ A +E IH  +L+HDD+  +D   +RRG+ + +
Sbjct: 58  GGKRLRPVLTLASAKLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASAN 115

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + +FE++      ++D   S L +LS   ++  +G +  Q++  
Sbjct: 116 ALFGNKPSVLVGDFLFSRSFELM------VEDGSLSVLAILSRASSVIAEGEVL-QLITA 168

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     + + KT AL   AC  GA++A   + E+E L  +G NLGI FQL DD+
Sbjct: 169 NDTETSEDSYLEVIRSKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDV 228

Query: 228 LD 229
           LD
Sbjct: 229 LD 230


>gi|152980282|ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille]
 gi|151280359|gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille]
          Length = 334

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A+ +        ++ A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 55  GGKRIRPVLVLLMANAYGYRGTDHHQLAAVVEFIHTATLLHDDV--VDESSLRRGRKTAN 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ S       +IR   +L+   N+  +G +  Q+L++ 
Sbjct: 113 ALFGNAASVLVGDFLYSRAFQMMVSVG-----DIRIMQILADATNVIAEGEVL-QLLNMH 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + G ++A AS +E E    +G +LG  FQL DD+L
Sbjct: 167 DPDVSEERYTQVIRSKTAKLFEAAAQLGTLIAGASDDEIEAAAEYGRSLGTAFQLIDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|326385511|ref|ZP_08207150.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326210050|gb|EGD60828.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 337

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L         ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 56  GGKRMRPMLTLAGAELVGYGGSRHYKLAAAVEFIHTATLLHDDV--VDGSDMRRGKKAAN 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I Y     ++ G+ L + +FE++         +I+   +LS    I  +G +  Q++  +
Sbjct: 114 IIYGNPATVLVGDFLFSRSFELMVE-----DGSIKVLRILSNASAIITEGEVD-QLIAQR 167

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   I   KT AL   AC   A++A   ++E+  L  +G +LG  FQLADD +
Sbjct: 168 EIETSEERYLAIINGKTAALFAAACRIAAVVAERPEDEELALDAYGRHLGTAFQLADDAI 227

Query: 229 DCEED 233
           D + D
Sbjct: 228 DYDSD 232


>gi|330508369|ref|YP_004384797.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanosaeta concilii GP-6]
 gi|328929177|gb|AEB68979.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanosaeta concilii GP-6]
          Length = 319

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 11/185 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A       L       +IE +H ++LIHDD+  MDN  +RRG+P VH
Sbjct: 39  GGKRLRPSMLLLAAEAAGGEALALAPAAVSIELVHNFTLIHDDI--MDNADVRRGRPAVH 96

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + +  AI+AG+ L + AF+++       +  + +  MLS T       +  GQ LD++
Sbjct: 97  KIWGQSGAILAGDTLYSKAFQVLGMTAASPERILGAMNMLSRT----CTAICEGQWLDME 152

Query: 169 ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D   +   + MI+K KTG L   +   G ++A AS      L  FG   G+ FQL 
Sbjct: 153 FESKDRVTENEYMEMIEK-KTGVLYGASAGMGGLLAGASPEVVRALDEFGRLTGMGFQLQ 211

Query: 225 DDLLD 229
           DD++D
Sbjct: 212 DDVID 216


>gi|329767887|ref|ZP_08259401.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341]
 gi|328838675|gb|EGF88274.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341]
          Length = 315

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 36  NDRLLSAI-RYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +DRL   I RY L GGK++R  L+  CA L  F +N    +R+ + +E IH  SLIHDD+
Sbjct: 24  DDRLNEIIKRYFLNGGKRVRVLLLLMCAKLGNFELNRKDIIRMASIVEIIHTASLIHDDI 83

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN-IRSQLMLSLT 151
             +DN   RRG  T++ +Y    A+  G+    Y F I+ +   +  D  I + L  +L 
Sbjct: 84  --IDNADTRRGSITMNKEYTNEFALHVGD----YLFAIVLNEVAKFSDERIHNYLAETLK 137

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
                + +    + +I+   ID  +     K KT  L+ FAC +G+I++ AS    +   
Sbjct: 138 ELCIGELIQADGLYNIKTRRIDYLKKI---KRKTAILIAFACVAGSIVSKASDENIKSAF 194

Query: 212 CFGENLGIIFQLADDLLD 229
            +G  LG+ +Q+ DD LD
Sbjct: 195 SYGYYLGMSYQIIDDYLD 212


>gi|15678079|ref|NP_275193.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|3334232|sp|O26156|IDSA_METTH RecName: Full=Bifunctional short chain isoprenyl diphosphate
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyl pyrophosphate synthase; Short=FPP
           synthase; AltName: Full=Geranyltranstransferase
 gi|2621086|gb|AAB84557.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 325

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 119/230 (51%), Gaps = 29/230 (12%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I  I  + LL+ + H+ T               GGKKIR  L    +     +   A 
Sbjct: 21  ESISDITPETLLRASEHLITA--------------GGKKIRPSLALLSSEAVGGDPGDAA 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IIS 132
            V AAIE IH +SLIHDD+  MD+  IRRG+P VH+ + E  AI+AG+ L + AFE +I 
Sbjct: 67  GVAAAIELIHTFSLIHDDI--MDDDEIRRGEPAVHVLWGEPMAILAGDVLFSKAFEAVIR 124

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKM--KTGALM 189
           +  +++   ++  L + +   + +     GQ LD+  +E +D T+   ++ +  KT AL+
Sbjct: 125 NGDSEM---VKEALAVVVDSCVKI---CEGQALDMGFEERLDVTEEEYMEMIYKKTAALI 178

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             A ++GAIM   S  E   L  +G  +G+ FQ+ DD LD    EE L K
Sbjct: 179 AAATKAGAIMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVSDEESLGK 228


>gi|222478679|ref|YP_002564916.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451581|gb|ACM55846.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 280

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 13/187 (6%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK++R  +       F+ +   A+   A IE +H  SL+ DD+  +D   +RRG P+
Sbjct: 36  LAGGKRVRPAVTILACEAFDGDPDAAVDFAAGIEFVHNASLVIDDI--IDRSEVRRGTPS 93

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
              +Y    AIIA +GLL  AF + S+    ++    ++ ++ L           G+  +
Sbjct: 94  AWAEYGYGPAIIASDGLLGEAFALFSADPRAMR--TVAEALVELGE---------GEATE 142

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +      E +   + + KTGAL   A E GAI   A  +  +    + E +G+ FQ+ DD
Sbjct: 143 LAARPTTEAEYMELARRKTGALFRAAAELGAIAGGADSHAVDSFGEYAERVGVAFQMRDD 202

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 203 VLDATAD 209


>gi|262277442|ref|ZP_06055235.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114]
 gi|262224545|gb|EEY75004.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114]
          Length = 337

 Score = 85.1 bits (209), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 19/227 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECA 62
           + S  QE  K++D   D + L+ +SH++      L+  +   L+  GGK++R  L    +
Sbjct: 19  IKSAYQEQLKKVD---DHIKLKLSSHVE------LVGEMATHLMSTGGKRLRPLLTICSS 69

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +FN      + + A +E IH  +L+HDD+  +D    RRG  T +  +   ++I+AG+ 
Sbjct: 70  EIFNYKGNRHINLAACVELIHNATLLHDDV--IDKSESRRGFKTTNAIWGNKSSILAGDY 127

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL+  FE++    +Q    I S +   +     +Q     Q+  ++  ++D      I  
Sbjct: 128 LLSRCFEMMVDDGSQEVLKILSSVSSEIAQGEIMQLQFEKQVDMVEKNYLD------IIS 181

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT +L   +   G  +   S  EKE L  +G NLGI FQ+ DD+LD
Sbjct: 182 AKTASLFGASMRVGGCINDRSNKEKEALESYGRNLGICFQITDDILD 228


>gi|103486007|ref|YP_615568.1| trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256]
 gi|98976084|gb|ABF52235.1| Trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256]
          Length = 337

 Score = 85.1 bits (209), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   C  L +       ++ AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 56  GGKRMRPMLTLACGRLLDYPGRRHCKLAAAVEFIHTATLLHDDV--VDKSDLRRGRKTAN 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L + AFE++         +++   +LS    +  +G +    L  Q
Sbjct: 114 VIWGNSASVLVGDFLFSRAFEVMVE-----DGSLKVLKILSRASAVIAEGEV--NQLSAQ 166

Query: 169 DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                 E Q   I   KT  L   AC+  A++A   +  +  L  +G NLGI FQL DD 
Sbjct: 167 RRIETSEDQYLAIINAKTAELFAAACKIAAVVAERDEATEAALDAYGRNLGIAFQLVDDA 226

Query: 228 LDCEED 233
           +D   D
Sbjct: 227 IDYVSD 232


>gi|254283313|ref|ZP_04958281.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
           NOR51-B]
 gi|219679516|gb|EED35865.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
           NOR51-B]
          Length = 292

 Score = 85.1 bits (209), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AI 79
           DL    A+    +   +L +A+ YA+  GG ++R  L    A+       +  +  A AI
Sbjct: 11  DLERAVAAGADERCPPQLANALHYAVFPGGARVRPQLCMAVAAANTGKDPSLAKSAACAI 70

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +HC SL+HDDLP  D+  +RRGKP+VH  + E  A++ G+ L+  AF++++      +
Sbjct: 71  ELLHCASLVHDDLPCFDDATVRRGKPSVHSAFGERIAVLTGDALIVMAFQVLAKGMATAR 130

Query: 140 DNIRSQLMLSLTHN--IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
              R   ++    +      G+  GQ  + +        + +  + KTGAL      +  
Sbjct: 131 YPDRGPAVMGYVADGVAAPCGIAAGQAWECE----QRVDLALYHQSKTGALF---IAATC 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             A A+  +    R  G ++G  +Q+ADD+ D   D+
Sbjct: 184 AGAAAAGVDPTPWRNLGASIGEAYQVADDIKDATSDI 220


>gi|21222966|ref|NP_628745.1| polyprenyl diphosphate synthase [Streptomyces coelicolor A3(2)]
 gi|289769814|ref|ZP_06529192.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
 gi|10129728|emb|CAC08284.1| putative polyprenyl diphosphate synthase [Streptomyces coelicolor
           A3(2)]
 gi|289700013|gb|EFD67442.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
          Length = 336

 Score = 85.1 bits (209), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++D   A++ G+ L   A +I++    +    +R Q        +  + ++ GQ+L   
Sbjct: 111 TRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+
Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|315646428|ref|ZP_07899546.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453]
 gi|315278071|gb|EFU41391.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453]
          Length = 324

 Score = 84.7 bits (208), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 18/186 (9%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R   V        ++++ L    V   +E IH  SL+HDD+  +D+   RRGKPT
Sbjct: 43  GGKRLRPVFVLMGGKFGDYDIDKLK--HVAVPLELIHSASLVHDDV--IDDADTRRGKPT 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V  ++D   A+  G+ +   A E+ +  K      I ++ M+ ++          G+M  
Sbjct: 99  VKAKWDNRIAMYTGDYIYGKALELTTHLKQPEIHQILAKAMVEMSI---------GEMEQ 149

Query: 167 IQDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D F  E  V  ++++ + KT  L+  +C+ GA+ A A +     L  FG N+G+ FQ+
Sbjct: 150 IRDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADADRQVANSLYRFGYNVGMAFQI 209

Query: 224 ADDLLD 229
            DDLLD
Sbjct: 210 QDDLLD 215


>gi|325981722|ref|YP_004294124.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212]
 gi|325531241|gb|ADZ25962.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212]
          Length = 322

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F  +      + A IE IH  +L+HDD+  +D   +RR + T +
Sbjct: 43  GGKRLRPALVILSAGAFGYSGKFHYNLAAVIEFIHTATLLHDDV--VDESELRRNRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++        DN+R  Q++   T+ I    +L  Q+L+ 
Sbjct: 101 ALFGNAASVLVGDFLYSRAFQMMVEV-----DNMRVMQVLADATNTIAEGEVL--QLLNC 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D  + E     + + KT  L   A   GAI+ +A+  E+  +  +G +LG  FQL DD+
Sbjct: 154 RDPQVSEENYLQVIRFKTAKLFEAASRLGAILGNATSEEENAMAVYGMHLGTAFQLVDDM 213

Query: 228 LD 229
           LD
Sbjct: 214 LD 215


>gi|317046711|ref|YP_004114359.1| polyprenyl synthetase [Pantoea sp. At-9b]
 gi|316948328|gb|ADU67803.1| Polyprenyl synthetase [Pantoea sp. At-9b]
          Length = 323

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLSARALNYQGSQHITNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S       +++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----MGSLKILALMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI+A A+  +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYIGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|256785921|ref|ZP_05524352.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
          Length = 298

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 15  GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSAN 72

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++D   A++ G+ L   A +I++    +    +R Q        +  + ++ GQ+L   
Sbjct: 73  TRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 122

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+
Sbjct: 123 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 176

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 177 AFQLADDVLDIASD 190


>gi|288801789|ref|ZP_06407231.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18]
 gi|288335831|gb|EFC74264.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18]
          Length = 326

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK++R  L+   A  F             +E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  AGKRMRPILILLMAKNFGKVSEATQHAAVGLELLHTASLVHDDV--VDEAAARRGQASVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             YD   A++ G+ +L+ A   +S   +++     ++L  +L+    LQ      + +IQ
Sbjct: 102 ADYDNKVAVLVGDYVLSTALLHVSYTHSEIIVRYLAELGRTLSDGEILQ------LWNIQ 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           ++ I E   + I + KT AL       GA  A+AS  E E  R FG++LGI+FQ+ DD+ 
Sbjct: 156 NKEITEEVYYKIIERKTAALFESCAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIF 215

Query: 229 D 229
           D
Sbjct: 216 D 216


>gi|332827843|gb|EGK00578.1| hypothetical protein HMPREF9455_03221 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 323

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 21/202 (10%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +N R+   I Y +   GK+IR  L+      C  + N  + +A+ V    E +H  SLIH
Sbjct: 29  NNVRIQEIIDYIMKSDGKRIRPILLLLAAKACGEINNTTYNSAITV----ELLHTASLIH 84

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   IRRG  +++  YD   A++AG+  L+ A       K+ L  NI    ++S
Sbjct: 85  DDV--VDESKIRRGMASLNAIYDNKMAVLAGDYFLSTAL-----IKSVLTGNIE---IIS 134

Query: 150 LTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              ++G     G   Q+  +++  +DE + F + + KT +LM      GA+   AS  E 
Sbjct: 135 RVSDLGRDLAEGELNQLSLVKELILDEDEYFQVIRKKTASLMSVCMRIGAMSVDASSEEV 194

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           ER    GE LG+ FQL DD+ D
Sbjct: 195 ERFTKLGEYLGVCFQLRDDIFD 216


>gi|238761751|ref|ZP_04622725.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638]
 gi|238699865|gb|EEP92608.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638]
          Length = 323

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTS-----LESLRVLTLMSAATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S AI++ A+  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAILSDATPEQELTLQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|315121918|ref|YP_004062407.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495320|gb|ADR51919.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 322

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 11/189 (5%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           ++Y +  GGK++R  L    A +        + +  AIE IH  +L+HDD+  +D+  +R
Sbjct: 34  VKYLIFSGGKRLRPMLTVATALMLEYRGNNHVLLACAIEFIHTATLLHDDV--VDDSALR 91

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGK    + +    +++ G+ LL+ AF ++   K+Q    + S +  +L+     +G L 
Sbjct: 92  RGKAAARLVWGNQASVLVGDFLLSQAFSMVIETKSQEALKVLSLVACTLS-----EGEL- 145

Query: 162 GQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            + L I     + E     + K KT AL   A E  ++++ A  + ++ L+ +G NLGI 
Sbjct: 146 -RQLSISKNLNVTEEDYLYVIKSKTAALFVAALEVSSLISGAQDSVRDALKSYGTNLGIA 204

Query: 221 FQLADDLLD 229
           FQL DD LD
Sbjct: 205 FQLVDDALD 213


>gi|39996419|ref|NP_952370.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA]
 gi|39983299|gb|AAR34693.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA]
 gi|298505429|gb|ADI84152.1| octaprenyl diphosphate synthase [Geobacter sulfurreducens KN400]
          Length = 322

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L+   A L        + + + IE IH  +L+HDD+  +DN  +RRG  + +
Sbjct: 41  GGKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATLLHDDV--VDNATLRRGNASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++         ++R   ++S    I  +G +  Q+L   
Sbjct: 99  EVWGNEASVLVGDFLFSKSFSLMVEAG-----DLRILKVISGATTIIAEGEVL-QLLCTS 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + + +   + K KT  L+  ACE+GAI+  +S  ++E LR FG +LGI FQL DD L
Sbjct: 153 DLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAEQQEALRDFGMDLGIAFQLMDDTL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|224476589|ref|YP_002634195.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222421196|emb|CAL28010.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 318

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 15/185 (8%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R SF+V       N  +    ++  ++E IH  +L+HDD+  +D    RRG+ T+
Sbjct: 39  GGKRVRPSFVVLSSEYGVNPRNEDTYKIAVSLELIHMATLVHDDV--IDRSDKRRGRLTI 96

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++D+ TAI+ GN LL  A   ISS + +     R  ++LS      +  +  G++   
Sbjct: 97  SKKWDQETAILTGNYLLALALNNISSIQDK-----RIHIILS----NAIVDVCRGELFQF 147

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           QD+F  ++T    ++++  KT  L+  A E GA+ A+A      +L+  G  +G+ FQ+ 
Sbjct: 148 QDQFNSNQTITNYLRRINRKTALLIQLATELGALSANADLKTANKLKRIGHYIGMSFQIV 207

Query: 225 DDLLD 229
           DD+LD
Sbjct: 208 DDVLD 212


>gi|57234813|ref|YP_181134.1| heptaprenyl diphosphate synthase component II [Dehalococcoides
           ethenogenes 195]
 gi|57225261|gb|AAW40318.1| heptaprenyl diphosphate synthase component II [Dehalococcoides
           ethenogenes 195]
          Length = 324

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
            +  S  + Q    +   + Y L+GGK +R  L    A  F       L +  + E +H 
Sbjct: 22  FKLVSESRKQSFPEMAEMLDYILVGGKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLHI 81

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD  ++D    RR + TV+  +    AI+ G+ L  +A E+ +       DN+R 
Sbjct: 82  ATLVHDD--AIDKADTRRSRRTVNSVWGLEKAILLGDFLFAHAAEVAAE-----TDNMRI 134

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAH 201
             + + T    LQ +  G++      F  D++    ++++  KT AL   A + GAI+A 
Sbjct: 135 VTLFAQT----LQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILAD 190

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           AS +++E +R +G NLG+ FQ+ DD+LD
Sbjct: 191 ASPSDEEIMRSYGYNLGLSFQIVDDILD 218


>gi|302344811|ref|YP_003813164.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
 gi|302149655|gb|ADK95917.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
          Length = 326

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK++R  L+   A  F             +E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  AGKRMRPILILLMAKNFGKVSEATQHAAVGLELLHTASLVHDDV--VDEAAARRGQASVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             YD   A++ G+ +L+ A   +S   +++     ++L  +L+    LQ      + +IQ
Sbjct: 102 ADYDNKVAVLVGDYVLSTALLHVSYTHSEIIVRYLAELGRTLSDGEILQ------LWNIQ 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           ++ I E   + I + KT AL       GA  A+AS  E E  R FG++LGI+FQ+ DD+ 
Sbjct: 156 NKEITEEVYYKIIERKTAALFESCAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIF 215

Query: 229 D 229
           D
Sbjct: 216 D 216


>gi|291299508|ref|YP_003510786.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290568728|gb|ADD41693.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 368

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 15/183 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L   CA         A+    A+E +H +SL+HDD+  +D    RR + TV 
Sbjct: 66  GGKALRPALTLLCAEAAGGQADEAVPAAVAVELVHNFSLLHDDV--IDGDRTRRHRATVW 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   TAI+AG+ LL+ AFE+++  +      + ++ +  L           GQ+ D+ 
Sbjct: 124 AVFGRPTAILAGDSLLSLAFEVLAESRPA-GVGVLAEAVTRLND---------GQLRDMD 173

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  +   + M   KTGALM  AC  GA    A      R   FG  LG+ FQ AD
Sbjct: 174 LETRVDVSLAECRDMAARKTGALMAAACRLGAESGGADGERAGRFADFGGALGLAFQAAD 233

Query: 226 DLL 228
           DLL
Sbjct: 234 DLL 236


>gi|51594815|ref|YP_069006.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
           32953]
 gi|153949434|ref|YP_001402567.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
           31758]
 gi|170025973|ref|YP_001722478.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis YPIII]
 gi|186893824|ref|YP_001870936.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis PB1/+]
 gi|51588097|emb|CAH19703.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP
           32953]
 gi|152960929|gb|ABS48390.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP
           31758]
 gi|169752507|gb|ACA70025.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186696850|gb|ACC87479.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 323

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALNYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLQS-----MRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S AI++ AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEESYMQVIYSKTARLFEAAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|23014219|ref|ZP_00054047.1| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 339

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ A +E IH  +L+HDD+  +D   +RRG+ + +
Sbjct: 58  GGKRLRPVLTLASAKLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASAN 115

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + +FE++      ++D   S L +LS   ++  +G +  Q++  
Sbjct: 116 ALFGNKPSVLVGDFLFSRSFELM------VEDGSLSVLAILSHASSVIAEGEVL-QLITA 168

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     + + KT AL   AC  GA++A   + E+E L  +G NLGI FQL DD+
Sbjct: 169 NDTETSEDSYLEVIRSKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDV 228

Query: 228 LD 229
           LD
Sbjct: 229 LD 230


>gi|188532487|ref|YP_001906284.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99]
 gi|188027529|emb|CAO95376.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99]
          Length = 324

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLVTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+IR  +    A   N      H+T   V A IE IH  +L+HDD+  +D   +RRGK
Sbjct: 43  GGKRIRPMIAVLAARAINDYAGKQHIT---VAALIEFIHTATLLHDDV--VDESDMRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q+
Sbjct: 98  ATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QL 151

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++  D  I E     +   KT  L   A +S AI+A A+ ++++ L+ +G  +G  FQL 
Sbjct: 152 MNCNDPDITEESYMRVIYSKTARLFEAAAQSSAILAGATASQEQALQDYGRYIGTAFQLI 211

Query: 225 DDLLDCEED 233
           DDLLD   D
Sbjct: 212 DDLLDYSAD 220


>gi|311895176|dbj|BAJ27584.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 357

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 7/184 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     N    +  G ++E +H +SL+HDDL  MD    RR + T  
Sbjct: 63  GGKAVRPALALLSAEAVGANAQVGVPGGVSVELVHNFSLLHDDL--MDGDETRRHRATAW 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +    A++AG+ L T   E++  +  T   D + +   + L      + ++ GQ LD+
Sbjct: 121 TVFGPAQAVLAGDALATLGTEVLLDAAVTGGADPVDAARAVRLI-TTATRRLIDGQALDV 179

Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             E  D   V     ++  KTGAL+  +   GA++A A     + L+ +G +LG+ FQ  
Sbjct: 180 SFEQRDAVTVEECLAMEGGKTGALLAASAAIGAVLAGADDRVSDALQRYGYHLGLAFQAV 239

Query: 225 DDLL 228
           DDLL
Sbjct: 240 DDLL 243


>gi|254462754|ref|ZP_05076170.1| geranylgeranyl pyrophosphate synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206679343|gb|EDZ43830.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 333

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L   +    + + A +E IH  +L+H
Sbjct: 33  MASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPYHVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L + +F+++    +    +I +    +
Sbjct: 93  DDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSMRVLDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   QD    E     + + KT AL   A E G ++A A +   + 
Sbjct: 151 IAEGEVLQ------LTASQDLSTTEAIYLQVVRGKTAALFSAATEVGGVIAGADEAHVKA 204

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LGI FQ+ DDLLD   D
Sbjct: 205 LFDYGDALGIAFQIVDDLLDMSGD 228


>gi|188585880|ref|YP_001917425.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350567|gb|ACB84837.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 337

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 23/189 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R  LV   A++  V+    L+   A E IH  SL+HDD+  +DN   RRGK TV+ 
Sbjct: 46  GKLFRPVLVYLSANIHQVDKDRVLKTAMASELIHLASLVHDDI--IDNSDYRRGKQTVNY 103

Query: 110 QYDEVTAIIAGNGLLTYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +   +A++ G+ L + AF I   I SPK          +M   T  I    M  G+++ 
Sbjct: 104 YWGNKSAVLVGDYLFSKAFSILAMIDSPK----------IMALFTDAIS--KMCQGELIQ 151

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHA---SQNEKERLRCFGENLGII 220
           + + F   I     F + + KT AL+   CESGAI++     S      L+ +G +LG  
Sbjct: 152 LNNAFKSGISREIYFKVIEYKTAALLAACCESGAILSSGNGKSCKSAAALKNYGLHLGRA 211

Query: 221 FQLADDLLD 229
           +Q+ DD++D
Sbjct: 212 YQIIDDVMD 220


>gi|118576854|ref|YP_876597.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
           [Cenarchaeum symbiosum A]
 gi|118195375|gb|ABK78293.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
           [Cenarchaeum symbiosum A]
          Length = 272

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 10/196 (5%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L   +RYA+ GGK+IR  ++   A               A+E +H  S+IHDD+  +D+ 
Sbjct: 27  LTGPLRYAITGGKRIRPIILVLAAESVGSADDNTYAAACAVELLHTESVIHDDI--IDDE 84

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RR K   HI+Y + T+I+ G+ +L    +I S       DN+R    LS T  +  +G
Sbjct: 85  TMRRHKDPFHIKYGQNTSILTGDFVLGLILKICSR-----LDNVRIADDLSTTAMMMSEG 139

Query: 159 -MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
             + G++ +  D   D+     + + KT      A + GAI+   S+ + E L  FG+N+
Sbjct: 140 EAIEGRLENSGDVTFDD--YLKVIEYKTATAFEVASKIGAILGGGSERQVEDLTGFGKNI 197

Query: 218 GIIFQLADDLLDCEED 233
           GI +Q+ DDL D + +
Sbjct: 198 GIAYQIKDDLNDWKNE 213


>gi|288931665|ref|YP_003435725.1| polyprenyl synthetase [Ferroglobus placidus DSM 10642]
 gi|288893913|gb|ADC65450.1| Polyprenyl synthetase [Ferroglobus placidus DSM 10642]
          Length = 301

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 21/186 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V   A L   +    L +  A+E IH  SL HDD+  +D G  RR K T++
Sbjct: 39  GGKRTRPIIVLLSAKLAGGDEKEILDMALAVELIHTASLAHDDV--IDRGVKRRNKETLN 96

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLD 166
           ++YD+  AI+ G+ L++ + ++             ++    +  +    GML   G++LD
Sbjct: 97  VKYDDSLAILVGDWLISKSVQLT------------AKYGYDIVRDFAKTGMLMSEGEVLD 144

Query: 167 IQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQL 223
           +    E  DE   F   + KT AL  ++ ++     + SQ+E  E+L  +G NLGI +QL
Sbjct: 145 VYSTKEKFDEEDYFKCIEYKTAALFAYSAKNA--YQYFSQDEGVEKLFQYGLNLGIAYQL 202

Query: 224 ADDLLD 229
            DDLL+
Sbjct: 203 VDDLLE 208


>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 222

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 10/153 (6%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNI 142
           SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ LL  AFE   ++SS     +  I
Sbjct: 3   SLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMI 62

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGA 197
           R+  ++ L   IG  G++ GQM+D+  E ++  +V +     I   KT AL+  A   G 
Sbjct: 63  RA--VVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGV 120

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           IM   ++ E E+LR +   +G++FQ+ DD+LD 
Sbjct: 121 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDV 153


>gi|313204660|ref|YP_004043317.1| polyprenyl synthetase [Paludibacter propionicigenes WB4]
 gi|312443976|gb|ADQ80332.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4]
          Length = 328

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 12/188 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK++R  LV   A L    +   +    A+E +H  SLIHDD+  +D+   RRGKP+++
Sbjct: 48  SGKQLRPMLVLLSAKLCGHVNQNTVDGALALELLHTASLIHDDV--VDDTLERRGKPSIN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLD 166
            ++    AI++G+ +L+ A  ++ + KT       S  +L    NIG+Q   G   Q+ +
Sbjct: 106 ARWTNKIAILSGDYILSKA--LVCATKTN------SLPVLKSIANIGMQLSDGELLQLSN 157

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +Q     E     I + KT  L     E G +  +A+++   RLR FGE LGI FQ+ DD
Sbjct: 158 VQVLNASEENYLTIIRKKTALLFSTCTEVGGLSVNAAEDTLVRLRNFGEYLGICFQIKDD 217

Query: 227 LLDCEEDL 234
           + D  E++
Sbjct: 218 IFDYSENI 225


>gi|33519569|ref|NP_878401.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus]
 gi|33517232|emb|CAD83615.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus]
          Length = 324

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIRS ++   A     N      +   IE IH  +L+HDD+  +D+   RRGK T +
Sbjct: 43  GGKKIRSTMILLIAKSLTYNKTQHTILATLIEFIHTATLLHDDV--IDHSTTRRGKTTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
           I +    +I+ G+ + T AF++++         ++S  +LSL  +  +  +  G++L + 
Sbjct: 101 IIFGNPASILIGDFIYTRAFQMMTE--------LQSLRILSLMAD-AVNIIAEGEILQLT 151

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D  I       I   KT  L   A +S AI+AHA+  +++ L  +G+ +GI FQL D
Sbjct: 152 YCNDPTITMNNYMQIIYKKTARLFEVASQSSAILAHANIQQEQALSNYGKYIGIAFQLID 211

Query: 226 DLLD 229
           DLLD
Sbjct: 212 DLLD 215


>gi|83594313|ref|YP_428065.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
 gi|25989734|gb|AAN75038.1| CrtE [Rhodospirillum rubrum]
 gi|83577227|gb|ABC23778.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
          Length = 289

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 115/219 (52%), Gaps = 14/219 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFL-VTECASLFNVNHLTALRVG 76
           +D++L  T +         LL+ A+R+A+  GG ++R  L +   A+  N     A    
Sbjct: 7   IDNVLEATMTRADLPDAPPLLAKAMRHAVFPGGGRLRPRLTLAVAAACGNDLPAAADAAA 66

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AAIE +HC SL+HDDLP  D+ + RRG+ +VH+ Y E  A++AG+ L+  AF+ ++S   
Sbjct: 67  AAIELLHCASLVHDDLPCFDDAHSRRGQASVHVAYGEPLAVLAGDALIVMAFQGLASGLA 126

Query: 137 QLKDNIRSQLMLSLTHN-IGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            + +  R  L+L +  + +G+  G+  GQ  + +       ++   Q+ KTGAL   +  
Sbjct: 127 MVPE--RLPLLLGIVADAVGMPAGICAGQAWESE----PTVKLAEYQRAKTGALFAASTM 180

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +    A A+  E    R  GE LG  +Q+ADDL D   D
Sbjct: 181 A---GAAAAGREARSWRMLGECLGEAYQVADDLRDVAAD 216


>gi|300115547|ref|YP_003762122.1| trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113]
 gi|299541484|gb|ADJ29801.1| Trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113]
          Length = 322

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 14/226 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73
           D + DD+    A   Q  H+D  L++ + + ++  GGK++R  +V   A  F+      +
Sbjct: 8   DLVADDMRSVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFDYQGSYHI 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A IE IH  +L+HDD+  +D+  +RRG+ T +  +    +++ G+ L + AFE++  
Sbjct: 68  DIAAIIEFIHTATLLHDDV--VDSSELRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 125

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D++R   +L+ T N   +G +  Q+L+  +    E     I + KT  L   A 
Sbjct: 126 -----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 179

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + GA++ H S  E++ +  +G +LG  FQL DD+LD     EDL K
Sbjct: 180 QLGAVLCHRSSAEEKLMATYGMHLGTAFQLTDDVLDYSAFSEDLGK 225


>gi|58584789|ref|YP_198362.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|58419105|gb|AAW71120.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 328

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKK+R  LV     + N +    ++V A++E IH  +L+HDD+  +D    R G  T +
Sbjct: 50  GGKKVRPKLVFIICKMLNYSGEDRVKVAASVEFIHNATLLHDDV--LDESEARHGVKTAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   ++I+ G+ LLT AF  +         NI S ++   +H      ++ G++  + 
Sbjct: 108 KIWGNKSSILVGDLLLTLAFRWLIECGNL---NILS-ILSGASH-----SLVNGEIKQMA 158

Query: 169 DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             F   T     F I   KT +L    CE+ +++++A+ NE ERL+ FG N G+ FQ+ D
Sbjct: 159 ARFNSHTIRKNYFDIIGKKTASLFSACCEAASVISNATSNETERLKNFGLNFGMAFQIID 218

Query: 226 DLLDCEED 233
           D LD   D
Sbjct: 219 DTLDYTAD 226


>gi|1813470|gb|AAB41847.1| spore germination protein C3 [Bacillus firmus]
          Length = 288

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A+ F    +  L+ +   +E +H  SL+HDD+  +D+  +RRGK TV
Sbjct: 50  GGKRIRPVFVL-LAAKFGTYDIHVLKNIAVPLELVHMASLVHDDV--IDDAELRRGKRTV 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             Q+D   A+  GN +   A E      +   D+ R   +LS T    L  M  G++  I
Sbjct: 107 KSQWDNKVAMYTGNYIFAKAVE-----ASAYFDHPRVHQVLSNT----LVEMCIGEVEQI 157

Query: 168 QDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++      +V++ + K KT  L+  +CE GA+ A A    ++ L  FG N+G+ FQ+ 
Sbjct: 158 RDQYNWGQNLRVYLRRIKRKTALLIAVSCELGALAADADPVIQKHLYNFGYNVGMSFQIT 217

Query: 225 DDLLD 229
           DD+LD
Sbjct: 218 DDILD 222


>gi|323342013|ref|ZP_08082246.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464438|gb|EFY09631.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 279

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 4/189 (2%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           A+ Y+L+ GGK++R  L+      F  ++   L    A+E +H YSL+HDDLP+MD+  +
Sbjct: 25  AMTYSLMSGGKRLRPRLLLAMLEDFGCDYKLGLNPACALEMVHTYSLVHDDLPAMDDDDL 84

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RR KPT H  + E  AI+AG+ LLT AF  +S  ++ L  ++  + +  L  N G  GM+
Sbjct: 85  RRFKPTNHKVFGEGVAILAGDALLTGAFTALS--QSSLDSDVVGKCLEILARNAGNNGMI 142

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            GQ LDI D       +     +KTG L   A E   ++A     +K      G  LG+ 
Sbjct: 143 LGQELDIDDHIDHIDDLVACYNLKTGCLFAGAFEMAVVIAGKDSYQK-LAHDLGLTLGVA 201

Query: 221 FQLADDLLD 229
           FQ  DDLL+
Sbjct: 202 FQFQDDLLE 210


>gi|253991517|ref|YP_003042873.1| octaprenyl diphosphate synthase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638395|emb|CAR67017.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase (opp synthetase) [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782967|emb|CAQ86132.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase (opp synthetase) [Photorhabdus asymbiotica]
          Length = 323

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPIIAILAARALGYQSDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++++      +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 ATFGNAASVLVGDFIYTRSFQMMTT-----LNSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  S AI+++A+  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPNISEDDYMRVIYSKTARLFEVAAHSSAIISNATPEQETALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|138895788|ref|YP_001126241.1| heptaprenyl diphosphate synthase subunit II [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248670|ref|ZP_03147370.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           G11MC16]
 gi|134267301|gb|ABO67496.1| Component II of heptaprenyl diphosphate synthase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211546|gb|EDY06305.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           G11MC16]
          Length = 320

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A   + +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+ 
Sbjct: 43  GGKRIRPVFVLLAARFGHYDLERIKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A+  G+ L   + E ++       D+ R+  +L+ T    +  +  G++  I+
Sbjct: 101 AKWSNRFAMYTGDYLFARSLERMAE-----LDDPRAHQVLAKT----IVEVCRGEIEQIK 151

Query: 169 DEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           D++  E    T +  I++ KT  L+  +C+ GA+ A A ++  +RL  FG  +G+ FQ+ 
Sbjct: 152 DKYWFEQPLRTYLRRIRR-KTALLIAASCQLGALAAGAPESVAKRLYWFGHYVGMSFQIT 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFTGTEEQLGK 225


>gi|115526409|ref|YP_783320.1| farnesyltranstransferase [Rhodopseudomonas palustris BisA53]
 gi|115520356|gb|ABJ08340.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisA53]
          Length = 341

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 60  GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 118 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTE 177

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G  +A   + E+   R FG N+GI FQL DD+L
Sbjct: 178 DEYL------AVIRGKTAELFAAACEVGPAIAERPKPEQSACRSFGMNIGIAFQLVDDVL 231

Query: 229 D 229
           D
Sbjct: 232 D 232


>gi|33591927|ref|NP_879571.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I]
 gi|33571571|emb|CAE41057.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I]
 gi|332381344|gb|AEE66191.1| octaprenyl-diphosphate synthase [Bordetella pertussis CS]
          Length = 321

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 114/229 (49%), Gaps = 15/229 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + ++ K +DT++ D L      ++T   D ++ A      GGK++R  +V   A  
Sbjct: 6   LIAPIADDMKAVDTVIRDRLNSDVVLIRTI-GDYIIGA------GGKRMRPAMVLMVARA 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 59  LGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLVGDYLY 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + +FE++        D++R   +LS    +  +G +  Q+L++ D  + + +   + + K
Sbjct: 117 SRSFEMMVE-----ADSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQVVRYK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   A + GA++A AS  ++     +G ++G  FQL DD+LD   D
Sbjct: 171 TAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGTAFQLVDDVLDYSGD 219


>gi|89099139|ref|ZP_01172018.1| HepT [Bacillus sp. NRRL B-14911]
 gi|89086269|gb|EAR65391.1| HepT [Bacillus sp. NRRL B-14911]
          Length = 320

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 99/184 (53%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A   + +     +V  A+E IH  SL+HDD+  +D+  +RRGKPT+ 
Sbjct: 43  GGKRIRPVFVLLSAKFGSYDISEIKKVAVALELIHMASLVHDDV--IDDAELRRGKPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D  TA+  G+ +   + E+++  +      I ++ ++ +           G++  I+
Sbjct: 101 AKWDNRTAMYTGDYIFAKSLEVMTEIERPEAHEILAKTIVEVCV---------GEIEQIK 151

Query: 169 DE--FIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+  F    + ++++ K KT  L+  +C+ GA+ A   ++  ++L  FG  +G+ FQ+ D
Sbjct: 152 DKYRFDQNLRDYLLRIKRKTALLIAASCQLGAVAAGVDESIHKKLYKFGYYVGMSFQITD 211

Query: 226 DLLD 229
           D+LD
Sbjct: 212 DILD 215


>gi|261417952|ref|YP_003251634.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y412MC61]
 gi|319767236|ref|YP_004132737.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y412MC52]
 gi|261374409|gb|ACX77152.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y412MC61]
 gi|317112102|gb|ADU94594.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y412MC52]
          Length = 320

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A   + +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+ 
Sbjct: 43  GGKRIRPVFVLLSARFGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A+  G+ L   + E ++   +     + ++ ++ + H         G++  I+
Sbjct: 101 ARWSNRFAMYTGDYLFARSLERMAELDSPRAHQVLAKTIVEVCH---------GEIEQIK 151

Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  D+     ++++  KT  L+  +C+ GA+ A A +    RL  FG  +G+ FQ+ D
Sbjct: 152 DKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEAVANRLYWFGHYVGMSFQITD 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    EE L K
Sbjct: 212 DILDFTGTEEQLGK 225


>gi|269468820|gb|EEZ80424.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster
           bacterium]
          Length = 323

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  L+  CA       N +HL A+     IE IH  +L+HDD+  +D    RRGK
Sbjct: 44  GGKRLRPLLLLLCAKATGYQGNHHHLMAV----VIELIHTATLLHDDI--VDESATRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + AFE++  P     D++R   +LS T N   +G +  Q+
Sbjct: 98  DTANEVWGNAASVLVGDFLYSRAFEMMVEP-----DSMRIMKILSKTTNSIAEGEVL-QL 151

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L+ Q+  + E + F + + KT  L   + + G I+++A + ++  LR +G +LG  FQ+ 
Sbjct: 152 LNCQNSELSEAEYFNVIERKTACLFQASTQIGGILSNADEKQELALRNYGLHLGNAFQII 211

Query: 225 DDLLDCEED 233
           DD LD E D
Sbjct: 212 DDALDYESD 220


>gi|300024374|ref|YP_003756985.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526195|gb|ADJ24664.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 342

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +R  +A+E +H  +L+HDD+  +D    RRG+ T  
Sbjct: 61  GGKRLRPMLALASAKLCGYGGNGHIRTASAVEFMHTATLLHDDV--VDESATRRGRKTAR 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF++     +     I S    ++     +Q          +
Sbjct: 119 MIWGNQASVLVGDFLLGQAFKMFVDVGSLPVLRIMSNAAATIAEGEVMQLAAAKNTSTTE 178

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       I   KT AL   A ESGA +      E+  LR +G+NLG+ FQL DD L
Sbjct: 179 DDYL------AIINAKTAALFSAAAESGAALTQRPPEEQSALRSYGKNLGLAFQLVDDAL 232

Query: 229 DCEED 233
           D   D
Sbjct: 233 DYAGD 237


>gi|123440796|ref|YP_001004787.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087757|emb|CAL10543.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 323

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTS-----LESLRVLTLMSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A+++ A++ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|332160062|ref|YP_004296639.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318607378|emb|CBY28876.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664292|gb|ADZ40936.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862049|emb|CBX72215.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica W22703]
          Length = 323

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTS-----LESLRVLTLMSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A+++ A++ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|14625008|dbj|BAB61884.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum]
          Length = 147

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 8/149 (5%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +RRG PTVH+++ E TAI+ G+ L  +AF  ++S        I   L+ 
Sbjct: 1   HDDLPCMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLNAPGDSPI--ALVR 58

Query: 149 SLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L   +  +G  GGQ +D+    + ++  ++  + +MK+GAL+  +   GA+ A      
Sbjct: 59  ELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAVGVNAA 118

Query: 207 KERLRC----FGENLGIIFQLADDLLDCE 231
              L C    +    G+  Q+ DD+LD E
Sbjct: 119 HAALYCALDHYSACFGLALQVIDDILDAE 147


>gi|311896831|dbj|BAJ29239.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 362

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 17/217 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +DT+ D + L +  H+     D   SA+      GK IR  +V    +        A+R 
Sbjct: 48  VDTLPDSMRLISGYHLGWLEADGAPSAVG----AGKSIRPAMVLAATTAVGGRPQDAVRA 103

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
            AA+E +H ++L+HDD+  +D  + RR +PT    +    AI+AG+ + + A  +++  P
Sbjct: 104 AAAVELVHNFTLLHDDV--IDRDHTRRHRPTAWRVFGTTGAILAGDAMHSLALRVLAEDP 161

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCF 191
                  +R +L   +        +  GQ  D   ++  D T  +   + + KTGAL+  
Sbjct: 162 HPAAAAAVR-RLADCVVE------LCAGQQADCSFEQRTDVTLAECLTMAEGKTGALLGC 214

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           AC  GA+ A A     + +  FG  +G+ FQL DDL+
Sbjct: 215 ACALGALYAGADAETADAMDAFGREIGLAFQLIDDLI 251


>gi|288556090|ref|YP_003428025.1| heptaprenyl diphosphate synthase component II [Bacillus
           pseudofirmus OF4]
 gi|288547250|gb|ADC51133.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Bacillus pseudofirmus OF4]
          Length = 323

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A+ F    +  L+ +   +E +H  SL+HDD+  +D+  +RRGK TV
Sbjct: 43  GGKRIRPVFVL-LAAKFGTYDIHVLKNIAVPLELVHMASLVHDDV--IDDAELRRGKRTV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             Q+D   A+  GN +   A E      +   D+ R   +LS T    L  M  G++  I
Sbjct: 100 KSQWDNKVAMYTGNYIFAKAVE-----ASAYFDHPRVHQVLSNT----LVEMCIGEVEQI 150

Query: 168 QDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++      +V++ + K KT  L+  +CE GA+ A A    ++ L  FG N+G+ FQ+ 
Sbjct: 151 RDQYNWGQNLRVYLRRIKRKTALLIAVSCELGALAADADPVIQKHLYNFGYNVGMSFQIT 210

Query: 225 DDLLD 229
           DD+LD
Sbjct: 211 DDILD 215


>gi|167031734|ref|YP_001666965.1| polyprenyl synthetase [Pseudomonas putida GB-1]
 gi|166858222|gb|ABY96629.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
          Length = 322

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      Q++   T  I    +L  Q+  ++
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDEQREALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|17987815|ref|NP_540449.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella melitensis bv. 1 str. 16M]
 gi|17983542|gb|AAL52713.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella melitensis bv. 1 str. 16M]
          Length = 362

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 81  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 139 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 192

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 193 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 252

Query: 229 D 229
           D
Sbjct: 253 D 253


>gi|148545964|ref|YP_001266066.1| polyprenyl synthetase [Pseudomonas putida F1]
 gi|148510022|gb|ABQ76882.1| Polyprenyl synthetase [Pseudomonas putida F1]
          Length = 322

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      Q++   T  I    +L  Q+  ++
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|22124585|ref|NP_668008.1| octaprenyl diphosphate synthase [Yersinia pestis KIM 10]
 gi|45440424|ref|NP_991963.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806061|ref|YP_649977.1| octaprenyl diphosphate synthase [Yersinia pestis Antiqua]
 gi|108813417|ref|YP_649184.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
 gi|145600809|ref|YP_001164885.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides F]
 gi|153997290|ref|ZP_02022390.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125]
 gi|162421069|ref|YP_001608269.1| octaprenyl diphosphate synthase [Yersinia pestis Angola]
 gi|165928166|ref|ZP_02223998.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937469|ref|ZP_02226032.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166011293|ref|ZP_02232191.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166214028|ref|ZP_02240063.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167401227|ref|ZP_02306727.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167420704|ref|ZP_02312457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423704|ref|ZP_02315457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167470490|ref|ZP_02335194.1| octaprenyl-diphosphate synthase [Yersinia pestis FV-1]
 gi|218930527|ref|YP_002348402.1| octaprenyl diphosphate synthase [Yersinia pestis CO92]
 gi|229839166|ref|ZP_04459325.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229896655|ref|ZP_04511822.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A]
 gi|229899730|ref|ZP_04514871.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903892|ref|ZP_04519005.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
 gi|270489119|ref|ZP_06206193.1| polyprenyl synthetase [Yersinia pestis KIM D27]
 gi|294505357|ref|YP_003569419.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003]
 gi|21957387|gb|AAM84259.1|AE013669_9 octaprenyl diphosphate synthase [Yersinia pestis KIM 10]
 gi|45435281|gb|AAS60840.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108777065|gb|ABG19584.1| octaprenyl-diphosphate synthase [Yersinia pestis Nepal516]
 gi|108777974|gb|ABG12032.1| octaprenyl-diphosphate synthase [Yersinia pestis Antiqua]
 gi|115349138|emb|CAL22101.1| octaprenyl-diphosphate synthase [Yersinia pestis CO92]
 gi|145212505|gb|ABP41912.1| octaprenyl-diphosphate synthase [Yersinia pestis Pestoides F]
 gi|149288927|gb|EDM39007.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125]
 gi|162353884|gb|ABX87832.1| octaprenyl-diphosphate synthase [Yersinia pestis Angola]
 gi|165914574|gb|EDR33188.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165919853|gb|EDR37154.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165989677|gb|EDR41978.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166204823|gb|EDR49303.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166961510|gb|EDR57531.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049252|gb|EDR60660.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057874|gb|EDR67620.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229679662|gb|EEO75765.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
 gi|229687222|gb|EEO79297.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695532|gb|EEO85579.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229700433|gb|EEO88465.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A]
 gi|262363422|gb|ACY60143.1| octaprenyl-diphosphate synthase [Yersinia pestis D106004]
 gi|262367203|gb|ACY63760.1| octaprenyl-diphosphate synthase [Yersinia pestis D182038]
 gi|270337623|gb|EFA48400.1| polyprenyl synthetase [Yersinia pestis KIM D27]
 gi|294355816|gb|ADE66157.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003]
 gi|320013717|gb|ADV97288.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 323

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMISVLVARALNYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLQS-----MRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S AI++ AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEESYMQVIYSKTARLFEAAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|253995893|ref|YP_003047957.1| trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8]
 gi|253982572|gb|ACT47430.1| Trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8]
          Length = 322

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A LF        ++ A +E IH  +L+HDD+  +D    RRG+ T +
Sbjct: 43  GGKRLRPMLVLLAAGLFGEIQTQHHQLAAVVEFIHTATLLHDDV--VDESSKRRGQSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + + AF+++ + +     N+R   +LS   N+  +G +  Q+L++ 
Sbjct: 101 ALFGNAASVLVGDFVYSRAFQMMVAVQ-----NMRVMEVLSNATNVIAEGEVL-QLLNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I +     +   KT  L   A   GAI++ AS  ++  L  +G +LG  FQL DD+L
Sbjct: 155 NADISDKAYLQVIHYKTAKLFEAATRLGAIISEASAKDEAALTAYGMHLGTAFQLIDDIL 214

Query: 229 DC---EEDLPK 236
           D     ED+ K
Sbjct: 215 DLSGNSEDIGK 225


>gi|39934115|ref|NP_946391.1| farnesyltranstransferase [Rhodopseudomonas palustris CGA009]
 gi|192289642|ref|YP_001990247.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
 gi|39647963|emb|CAE26483.1| octaprenyl-diphosphate synthase [Rhodopseudomonas palustris CGA009]
 gi|192283391|gb|ACE99771.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 336

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSASATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G  +A+  + E+   R FG N+GI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|313497049|gb|ADR58415.1| IspB [Pseudomonas putida BIRD-1]
          Length = 322

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      Q++   T  I    +L  Q+  ++
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|260596184|ref|YP_003208755.1| octaprenyl-diphosphate synthase [Cronobacter turicensis z3032]
 gi|260215361|emb|CBA27367.1| Octaprenyl-diphosphate synthase [Cronobacter turicensis z3032]
          Length = 323

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALGYEGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     I+   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----IKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQCSGILAGASEAQERALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|26987423|ref|NP_742848.1| polyprenyl synthetase [Pseudomonas putida KT2440]
 gi|24982082|gb|AAN66312.1|AE016259_10 octylprenyl diphosphate synthase [Pseudomonas putida KT2440]
          Length = 322

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      Q++   T  I    +L  Q+  ++
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|237814874|ref|ZP_04593872.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella abortus str. 2308 A]
 gi|237789711|gb|EEP63921.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella abortus str. 2308 A]
          Length = 363

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 82  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 139

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 140 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 193

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 194 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 253

Query: 229 D 229
           D
Sbjct: 254 D 254


>gi|254701208|ref|ZP_05163036.1| hypothetical protein Bsuib55_10162 [Brucella suis bv. 5 str. 513]
          Length = 338

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 169 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|62289388|ref|YP_221181.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|189023639|ref|YP_001934407.1| polyprenyl synthetase [Brucella abortus S19]
 gi|254693184|ref|ZP_05155012.1| hypothetical protein Babob3T_00652 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696828|ref|ZP_05158656.1| hypothetical protein Babob28_03708 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254707866|ref|ZP_05169694.1| hypothetical protein BpinM_13091 [Brucella pinnipedialis
           M163/99/10]
 gi|254709549|ref|ZP_05171360.1| hypothetical protein BpinB_04602 [Brucella pinnipedialis B2/94]
 gi|254713033|ref|ZP_05174844.1| hypothetical protein BcetM6_06634 [Brucella ceti M644/93/1]
 gi|254716613|ref|ZP_05178424.1| hypothetical protein BcetM_09363 [Brucella ceti M13/05/1]
 gi|256031043|ref|ZP_05444657.1| hypothetical protein BpinM2_10374 [Brucella pinnipedialis
           M292/94/1]
 gi|256060537|ref|ZP_05450705.1| hypothetical protein Bneo5_09318 [Brucella neotomae 5K33]
 gi|256254446|ref|ZP_05459982.1| hypothetical protein BcetB_09183 [Brucella ceti B1/94]
 gi|256256948|ref|ZP_05462484.1| hypothetical protein Babob9C_06236 [Brucella abortus bv. 9 str.
           C68]
 gi|260168175|ref|ZP_05754986.1| polyprenyl synthetase family protein [Brucella sp. F5/99]
 gi|306839902|ref|ZP_07472700.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. NF 2653]
 gi|306845036|ref|ZP_07477617.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. BO1]
 gi|62195520|gb|AAX73820.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|189019211|gb|ACD71933.1| Polyprenyl synthetase [Brucella abortus S19]
 gi|306274668|gb|EFM56457.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. BO1]
 gi|306405088|gb|EFM61369.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. NF 2653]
 gi|326408435|gb|ADZ65500.1| Polyprenyl synthetase [Brucella melitensis M28]
 gi|326538151|gb|ADZ86366.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 338

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 169 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|297170868|gb|ADI21887.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium
           HF0130_25O04]
          Length = 277

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 10/189 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A R  L GGK+IR  LV  C S         L+V A +E +H  +L+HDD+  +D+  IR
Sbjct: 54  ARRVLLGGGKRIRPLLVYRCGSDSPDVTDDLLKVSAILELVHVATLVHDDV--LDHAKIR 111

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGML 160
           R + T+H +  E  AI+ G+ L ++A E+ +  P T++ + + S    + +  I      
Sbjct: 112 RSRATIHTEIGEHAAILLGDALFSFALELATEFPTTRICNIVSSATRRTCSGEIMQTFAR 171

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           G   L + D F        IQ  KTG     +C++GA +A  S+   + +  FG +LG+ 
Sbjct: 172 GNYDLGLPDYFS------FIQD-KTGEFFKASCQAGAFLAGHSECILDLVGEFGLSLGLN 224

Query: 221 FQLADDLLD 229
           +Q+ DDL+D
Sbjct: 225 YQIFDDLVD 233


>gi|90425826|ref|YP_534196.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB18]
 gi|90107840|gb|ABD89877.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB18]
          Length = 336

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   +    +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPNLTLAMAQLTGYSGEGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G  +A   + E+   R FG NLGI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPAIAGRPKAEQSACRSFGMNLGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|316932581|ref|YP_004107563.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
 gi|315600295|gb|ADU42830.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
          Length = 336

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSASATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G  +A+  + E+   R FG N+GI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|317121083|ref|YP_004101086.1| polyprenyl synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591063|gb|ADU50359.1| Polyprenyl synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 331

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A  F+ +    L V AA+E IH  +L+HDD+  +D    RRG PTV+
Sbjct: 53  GGKRLRPALLLLTARNFHYDRERLLPVAAAVELIHMATLVHDDI--VDGATSRRGLPTVN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +++   TA++ G+ L   AF ++++      DN   ++M    + +    +   Q   + 
Sbjct: 111 VRWGTGTAVLTGDFLFARAFSLLAAD----GDNRVVRVMAEAVYEMSTGEI--EQQAQLF 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E   +     KT   +   C  G +M  A + + E LR +G  +G+ FQ+ DD+L
Sbjct: 165 DPAAGEEGYYRRIYKKTAHFISHCCLMGGLMGGAPERQVEALRRYGYGIGMGFQVIDDIL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|225626910|ref|ZP_03784949.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella ceti str. Cudo]
 gi|225618567|gb|EEH15610.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella ceti str. Cudo]
          Length = 363

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 82  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 139

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 140 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 193

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 194 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 253

Query: 229 D 229
           D
Sbjct: 254 D 254


>gi|62959209|gb|AAY23712.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP840]
          Length = 145

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 2/134 (1%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PT H  YDE  AI+AG+ LLT AFE+++     +  +   +++  L+   G  G+
Sbjct: 12  LRRGRPTNHKVYDEAVAILAGDALLTRAFEMVALRSPAVPADRLLKVVGELSLVAGAPGL 71

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ++D++ E   +D   +  I   KTGAL+     +GA++  A     + LR +   +
Sbjct: 72  VGGQVVDLECEGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADDALIKALRTYARGI 131

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ DD+LD E
Sbjct: 132 GLAFQIIDDILDVE 145


>gi|163842683|ref|YP_001627087.1| hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445]
 gi|163673406|gb|ABY37517.1| Hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445]
          Length = 340

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 D 229
           D
Sbjct: 231 D 231


>gi|261751747|ref|ZP_05995456.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
 gi|261741500|gb|EEY29426.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
          Length = 340

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 D 229
           D
Sbjct: 231 D 231


>gi|163858538|ref|YP_001632836.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM
           12804]
 gi|163262266|emb|CAP44569.1| putative octaprenyl-diphosphate synthase [Bordetella petrii]
          Length = 345

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++   IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 66  GGKRLRPMLVILAGRACGGHGQGLHKLATIIEFIHTSTLLHDDV--VDESSMRRGRSTAN 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +  + A++ G+ L + +F+++     +L      Q++   T+ +    +L  Q+L + 
Sbjct: 124 AIWGSLPAVLVGDFLYSRSFQLM----VELGSMQIMQIIGKTTNQLAEGEIL--QLLHVH 177

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +DE     + K KT  L   +  +GAI+A A +  + R+  FGE+LG  FQ+ DD+L
Sbjct: 178 NPDVDEAAYMQVIKHKTAVLFAASTTAGAILAGADRELQRRMEVFGEHLGYAFQITDDVL 237

Query: 229 DCEED 233
           D   D
Sbjct: 238 DYTAD 242


>gi|326404029|ref|YP_004284111.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium
           multivorum AIU301]
 gi|325050891|dbj|BAJ81229.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium
           multivorum AIU301]
          Length = 289

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 11/199 (5%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSM 95
           +L +A+R+A+   G ++R  L    AS    +    A+  GAA+E +HC SL+HDDLP  
Sbjct: 26  KLAAAMRHAVFPRGARVRPRLCLAVASACGADRFDAAVAAGAALEFLHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRG+P+VH  +    A++AG+ L+  AF+ ++     L   ++   +++L+  + 
Sbjct: 86  DDAATRRGRPSVHAAFGAPIAVLAGDALIVLAFQTLA-----LGCAVQPGPVIALSGIVA 140

Query: 156 -LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
              GM GG +     E  DE  +   Q+ KT AL      +    A ++  +    R  G
Sbjct: 141 EAVGMPGGIVAGQAWESEDEVDLARYQRAKTSALF---AAAAMAGAASAGEDPLPWRALG 197

Query: 215 ENLGIIFQLADDLLDCEED 233
           +NLG  +Q+ADDL D   D
Sbjct: 198 DNLGDAYQIADDLCDAAGD 216


>gi|330997298|ref|ZP_08321151.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella
           xylaniphila YIT 11841]
 gi|329571093|gb|EGG52800.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella
           xylaniphila YIT 11841]
          Length = 323

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 16/201 (7%)

Query: 34  QH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           QH N  L+ A+R+ L   GK +R  L    A  +   + + L    ++E +H  SL+HDD
Sbjct: 27  QHQNPLLMIALRHVLSRKGKLMRPILTLLAAKKYGEINDSVLHAAVSLEMLHTASLVHDD 86

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D   +RRG+ +V+   D   A++ G+ LL+ A +        +  ++R   ++ L 
Sbjct: 87  V--VDESGVRRGQSSVNALLDNKAAVLVGDYLLSTALK-----HAAMAGDLR---VVDLV 136

Query: 152 HNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             +G Q +  G   Q+ +++ + I E Q F + + KT +L     E GA+++ AS+NE  
Sbjct: 137 ARLG-QTLSDGELQQLSNVKSDEISENQYFEVIRRKTASLFAVCAEVGALLSGASENEIL 195

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           RL  FG  +GI FQ+ DD+ D
Sbjct: 196 RLGEFGTYVGICFQIRDDVFD 216


>gi|190570943|ref|YP_001975301.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019458|ref|ZP_03335264.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357215|emb|CAQ54632.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994880|gb|EEB55522.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 328

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 12/229 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTE 60
           L + L ++SK  D +  DLL       +  +++  +L + I   L+  GGKKIR  L+  
Sbjct: 2   LNTDLTKSSKLDDIVSSDLLAMNDFIFKNVNDEGTKLATDITSHLINSGGKKIRPKLIFI 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              + N +  + + + A++E IH  +L+HDD+  +D    R G  T +  +   ++I+ G
Sbjct: 62  MCKMLNYSGESRVNIAASVEFIHNATLLHDDV--LDESKARHGVATANKIWGNKSSILVG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LLT AF  +         N+    +LS   N+ ++G +  QM    D        F I
Sbjct: 120 DLLLTLAFRWLIEC-----GNLSVLSILSKASNLLVKGEIK-QMTTRFDPNTIRKNYFNI 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KT +L     E+ ++++ A+ +E ERLR FG N G+ FQ+ DD+LD
Sbjct: 174 IGEKTASLFSACSEAASVVSGATSDETERLRNFGFNFGMAFQIIDDVLD 222


>gi|146339069|ref|YP_001204117.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278]
 gi|146191875|emb|CAL75880.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278]
          Length = 336

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAHLTEYAGDGHVKLAAAVEFMHTATLLHDDV--VDESEMRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G ++A   + E+   R FG NLGI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLADRPKAEQTASRSFGMNLGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|295398947|ref|ZP_06808929.1| heptaprenyl diphosphate synthase component II [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110446|ref|YP_003988762.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y4.1MC1]
 gi|294978413|gb|EFG54009.1| heptaprenyl diphosphate synthase component II [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215547|gb|ADP74151.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y4.1MC1]
          Length = 321

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A     +      V  A+E IH  SL+HDD+  +D+  +RRG+ T+ 
Sbjct: 43  GGKRIRPVFVLLAAKFGTYDIERVKHVAVALELIHMASLVHDDV--IDDAELRRGRQTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A+ AG+ +   + E+++  +  L   I +  ++ +           G++  I+
Sbjct: 101 AKWSNRFAMYAGDYMFARSLELMTRLENPLAHRILANTIVEVCR---------GEIEQIK 151

Query: 169 DEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  D+     ++  K KT  L+  +C+ GAI A+A++   +RL  FG  +G+ FQ+ D
Sbjct: 152 DKYRFDQNLRCYLRRIKRKTALLIAASCQLGAIAANAAKRTADRLYLFGYYVGMSFQITD 211

Query: 226 DLLD 229
           D+LD
Sbjct: 212 DILD 215


>gi|148253842|ref|YP_001238427.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|146406015|gb|ABQ34521.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 336

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAHLTGYAGDGHVKLAAAVEFMHTATLLHDDV--VDESEMRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G ++A   + E+   R FG NLGI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLADRPKAEQTASRSFGMNLGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|170723659|ref|YP_001751347.1| polyprenyl synthetase [Pseudomonas putida W619]
 gi|169761662|gb|ACA74978.1| Polyprenyl synthetase [Pseudomonas putida W619]
          Length = 322

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      Q++   T  I    +L  Q+  ++
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTSEEVYMEVIRGKTAMLFEASTHSAAALAGATDEQREALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|329929813|ref|ZP_08283489.1| putative heptaprenyl diphosphate synthase component II
           [Paenibacillus sp. HGF5]
 gi|328935791|gb|EGG32252.1| putative heptaprenyl diphosphate synthase component II
           [Paenibacillus sp. HGF5]
          Length = 324

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V       + +      V   +E IH  SL+HDD+  +D+   RRGKPTV 
Sbjct: 43  GGKRLRPVFVLMGGKFGDYDIDKLKHVAVPLELIHSASLVHDDV--IDDADTRRGKPTVK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +   A ++ +  K      I ++ M+ ++          G+M  I+
Sbjct: 101 AKWDNRIAMYTGDYIYGKALQLTTHLKQPEIHQILAKAMVEMSI---------GEMEQIR 151

Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D F  E  V  ++++ + KT  L+  +C+ GA+ A A +     L  FG N+G+ FQ+ D
Sbjct: 152 DFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADADRKVANSLYRFGYNVGMAFQIQD 211

Query: 226 DLLD 229
           DLLD
Sbjct: 212 DLLD 215


>gi|251791050|ref|YP_003005771.1| octaprenyl diphosphate synthase [Dickeya zeae Ech1591]
 gi|247539671|gb|ACT08292.1| Trans-hexaprenyltranstransferase [Dickeya zeae Ech1591]
          Length = 323

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALSYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI++ AS  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQASAILSDASSEQELALQEYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|62185577|ref|YP_220362.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3]
 gi|62148644|emb|CAH64417.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3]
          Length = 293

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 101/203 (49%), Gaps = 11/203 (5%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + + YAL  GGK+IR  LV   A    +     L    AIE IH  +LI DDLP MD+  
Sbjct: 34  APVEYALTSGGKRIRPMLVCMMAKGLGMGR-DVLDSALAIEFIHTSTLIADDLPCMDDDD 92

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--------NIRSQLMLSLT 151
            RRG+PTVH  +DE +A++A   L+  A+  I     +LK         +    ++  +T
Sbjct: 93  ERRGRPTVHKAFDEASALLASYALIPAAYSRIRLNAKKLKSLGVDSKEVDCAYDIISDIT 152

Query: 152 -HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             N G+ G+LGGQ  D+         V  I   KTGAL   AC SG +    +     ++
Sbjct: 153 DKNFGVHGVLGGQYEDMFFTNHGPEHVQSIINKKTGALFEIACVSGWLFGGGTPQCVPQV 212

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             F +  G++FQ+ DD+LD  +D
Sbjct: 213 LEFSQTFGLLFQIKDDILDIHQD 235


>gi|226227273|ref|YP_002761379.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27]
 gi|226090464|dbj|BAH38909.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27]
          Length = 307

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 109/198 (55%), Gaps = 14/198 (7%)

Query: 42  AIRYALLG-GKKIRSFLVTE----CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           A+RYALLG GK++R+ L+ E    C    +   L A     +IE +H YSL+HDDLP MD
Sbjct: 47  AVRYALLGEGKRLRAILLIEAYRACGGTGDAADLAA-----SIEVVHAYSLVHDDLPCMD 101

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNI 154
           +  +RRG+PTVH  +    A  AG  ++  A      +S    L D +   ++  L    
Sbjct: 102 DDDMRRGRPTVHKVHGVGVATAAGLAMVPLAARSAWHASKALGLSDVVAGDIVRELMEAS 161

Query: 155 GLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM+GGQ+LD++ E   +    +  + ++KTGAL+  +   GA  A A +  +  L  
Sbjct: 162 GGGGMIGGQLLDLEAEGAPLSLESLERVHRLKTGALIRASVTLGARAALAPEARRHALDR 221

Query: 213 FGENLGIIFQLADDLLDC 230
           +G ++G+ FQ+ADD+LD 
Sbjct: 222 YGASIGLAFQIADDVLDV 239


>gi|82699315|ref|YP_413889.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
 gi|225851937|ref|YP_002732170.1| hypothetical protein BMEA_A0432 [Brucella melitensis ATCC 23457]
 gi|254688701|ref|ZP_05151955.1| hypothetical protein Babob68_00654 [Brucella abortus bv. 6 str.
           870]
 gi|254718581|ref|ZP_05180392.1| hypothetical protein Bru83_03399 [Brucella sp. 83/13]
 gi|254729734|ref|ZP_05188312.1| hypothetical protein Babob42_00662 [Brucella abortus bv. 4 str.
           292]
 gi|256044121|ref|ZP_05447028.1| hypothetical protein Bmelb1R_06464 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112919|ref|ZP_05453832.1| hypothetical protein Bmelb3E_09565 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159107|ref|ZP_05456928.1| hypothetical protein BcetM4_09356 [Brucella ceti M490/95/1]
 gi|256368857|ref|YP_003106363.1| polyprenyl synthetase family protein [Brucella microti CCM 4915]
 gi|260545860|ref|ZP_05821601.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
 gi|260563478|ref|ZP_05833964.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260754179|ref|ZP_05866527.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757399|ref|ZP_05869747.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761223|ref|ZP_05873566.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883204|ref|ZP_05894818.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213426|ref|ZP_05927707.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261218414|ref|ZP_05932695.1| polyprenyl synthetase [Brucella ceti M13/05/1]
 gi|261221617|ref|ZP_05935898.1| polyprenyl synthetase [Brucella ceti B1/94]
 gi|261315356|ref|ZP_05954553.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317077|ref|ZP_05956274.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
 gi|261320737|ref|ZP_05959934.1| polyprenyl synthetase [Brucella ceti M644/93/1]
 gi|261324532|ref|ZP_05963729.1| polyprenyl synthetase [Brucella neotomae 5K33]
 gi|261757634|ref|ZP_06001343.1| polyprenyl synthetase [Brucella sp. F5/99]
 gi|265983557|ref|ZP_06096292.1| polyprenyl synthetase [Brucella sp. 83/13]
 gi|265988115|ref|ZP_06100672.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
 gi|265990531|ref|ZP_06103088.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994359|ref|ZP_06106916.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265997580|ref|ZP_06110137.1| polyprenyl synthetase [Brucella ceti M490/95/1]
 gi|265999601|ref|ZP_05467084.2| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|297247801|ref|ZP_06931519.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196]
 gi|82615416|emb|CAJ10385.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
 gi|225640302|gb|ACO00216.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|255999015|gb|ACU47414.1| polyprenyl synthetase family protein [Brucella microti CCM 4915]
 gi|260097267|gb|EEW81142.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
 gi|260153494|gb|EEW88586.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260667717|gb|EEX54657.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
 gi|260671655|gb|EEX58476.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674287|gb|EEX61108.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
 gi|260872732|gb|EEX79801.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915033|gb|EEX81894.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260920201|gb|EEX86854.1| polyprenyl synthetase [Brucella ceti B1/94]
 gi|260923503|gb|EEX90071.1| polyprenyl synthetase [Brucella ceti M13/05/1]
 gi|261293427|gb|EEX96923.1| polyprenyl synthetase [Brucella ceti M644/93/1]
 gi|261296300|gb|EEX99796.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
 gi|261300512|gb|EEY04009.1| polyprenyl synthetase [Brucella neotomae 5K33]
 gi|261304382|gb|EEY07879.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737618|gb|EEY25614.1| polyprenyl synthetase [Brucella sp. F5/99]
 gi|262552048|gb|EEZ08038.1| polyprenyl synthetase [Brucella ceti M490/95/1]
 gi|262765472|gb|EEZ11261.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001315|gb|EEZ13890.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094886|gb|EEZ18624.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660312|gb|EEZ30573.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
 gi|264662149|gb|EEZ32410.1| polyprenyl synthetase [Brucella sp. 83/13]
 gi|297174970|gb|EFH34317.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196]
          Length = 340

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 D 229
           D
Sbjct: 231 D 231


>gi|254513762|ref|ZP_05125823.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
           NOR5-3]
 gi|219676005|gb|EED32370.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
           NOR5-3]
          Length = 290

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 12/222 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSA-IRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           D+  + +L    +        +LL+A +++A+  GG ++R  L    A   N +      
Sbjct: 5   DSDFEQVLRSAVAEAADSRCPKLLAAALQHAVFPGGARVRPKLCLAVALANNCDAPALAA 64

Query: 75  VGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
             A ++E +HC SL+HDD+P  DN   RRG+ +VH  + E  A++AG+ L+  AF +++ 
Sbjct: 65  AAAASVELLHCASLVHDDMPCFDNAGERRGRESVHSAFGEPIALLAGDALIVSAFALLAR 124

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           P+   K+ + SQ++  +   +G   G+  GQ  +  +  +D   V +  + KTGAL   A
Sbjct: 125 PQLPAKNRL-SQVLRVVAEGVGAPCGIAAGQAWE-SEPVVD---VSLYHRSKTGALFIAA 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             +GA  A          R  G  +G  +Q+ADD+ D    L
Sbjct: 180 TAAGAAAAGVDVGP---WRTLGAKIGEAYQVADDIQDATSTL 218


>gi|261406049|ref|YP_003242290.1| trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10]
 gi|261282512|gb|ACX64483.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10]
          Length = 324

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V       + +      V   +E IH  SL+HDD+  +D+   RRGKPTV 
Sbjct: 43  GGKRLRPVFVLMGGKFGDYDIDKLKHVAVPLELIHSASLVHDDV--IDDADTRRGKPTVK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +   A ++ +  K      I ++ M+ ++          G+M  I+
Sbjct: 101 AKWDNRIAMYTGDYIYGKALQLTTHLKQPEIHQILAKAMVEMSI---------GEMEQIR 151

Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D F  E  V  ++++ + KT  L+  +C+ GA+ A A +     L  FG N+G+ FQ+ D
Sbjct: 152 DFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAADADRKVANSLYRFGYNVGMAFQIQD 211

Query: 226 DLLD 229
           DLLD
Sbjct: 212 DLLD 215


>gi|306842306|ref|ZP_07474966.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. BO2]
 gi|306287563|gb|EFM59019.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. BO2]
          Length = 322

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 41  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +    ++ +     +     +Q      M   +
Sbjct: 99  TIWGNQASVLVGDFLLGQAFKMMVDVGSLDALDVLATSASIIAEGEVMQLAAAKNMETTE 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 159 DEYL------AVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|224023511|ref|ZP_03641877.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM
           18228]
 gi|224016733|gb|EEF74745.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM
           18228]
          Length = 324

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 18/198 (9%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           +LS IR     GK +R  LV   A LF   + + L V  ++E +H  SL+HDD+  +D  
Sbjct: 36  VLSYIRKR--NGKMMRPILVMLMAKLFGHINSSTLHVALSLELLHTASLVHDDV--VDES 91

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLL-TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             RRG+ +V+  Y+   +++ G+ +L T  +    + K +L         + L   +G Q
Sbjct: 92  DERRGQSSVNAVYNNKISVLVGDYMLATSLWHAAHTGKVEL---------VELVARLG-Q 141

Query: 158 GMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  G   Q+ +I +    E   F + + KT AL   + ESGA+ A AS+ E  R   FG
Sbjct: 142 ALSEGEIIQLANISNRDFSEDIYFDVIRKKTAALFTASAESGALSAGASEEEVSRAADFG 201

Query: 215 ENLGIIFQLADDLLDCEE 232
           E +GI FQ+ DD+ D  E
Sbjct: 202 EMIGIAFQIKDDIFDYYE 219


>gi|294851781|ref|ZP_06792454.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026]
 gi|294820370|gb|EFG37369.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026]
          Length = 340

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 D 229
           D
Sbjct: 231 D 231


>gi|52550277|gb|AAU84126.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
           GZfos37B2]
          Length = 280

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 16/187 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIR  ++   + LF  +    +    AIE IH  SLIHDD+  +D G +RRG P+V+
Sbjct: 38  GGKKIRPIILILSSELFGGDADECVDAALAIELIHSASLIHDDI--LDVGLVRRGVPSVY 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            Q+    AI+ G+ L++ + E+IS   +  ++D  R+ + +S            G+ LD+
Sbjct: 96  NQFGLAAAILCGDFLISKSIELISKYDRAVIQDFGRAGMSMS-----------EGEALDV 144

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              +    E   F     KT +L   +   G+ +  A      R   +G +LG+ +Q+ D
Sbjct: 145 NSNETNFSENDYFECISKKTASLFAASARMGSRIGGAPARSINRCTEYGTHLGMAYQIID 204

Query: 226 DLLDCEE 232
           D+L+C+E
Sbjct: 205 DILECKE 211


>gi|330686015|gb|EGG97638.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis VCU121]
          Length = 319

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 22/212 (10%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIE 80
           L+ A H Q    D++L    + LL  GGK++R   V   +       ++    +V  A+E
Sbjct: 17  LEQAIHSQ----DKVLEEAAFHLLSSGGKRVRPAFVILSSQFGKEEGVSEDTYKVAVALE 72

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  +L+HDD+  +D    RRG+ T+  ++D+ TAII GN LL    + +S  K +   
Sbjct: 73  LIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAIITGNFLLALGLQHLSEIKDKRVH 130

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGA 197
            I S+ ++ +           G++   QD+F   +T    ++++  KT  L+  A E GA
Sbjct: 131 EILSESIVDVCR---------GELFQFQDQFNSQQTMTNYLRRINRKTALLIQLATEVGA 181

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I A +      +L+  G  +G+ FQ+ DD+LD
Sbjct: 182 ITAGSDIKTVRKLKMIGHYIGMSFQIVDDILD 213


>gi|148559082|ref|YP_001258425.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840]
 gi|148370339|gb|ABQ60318.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840]
          Length = 328

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 47  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 105 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 159 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|74100798|gb|AAZ99643.1| isoprenyl diphosphate synthase [Streptomyces maritimus]
          Length = 336

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++D   A++ G+ L   A +I++    +    +R Q        +  + ++ GQ+L   
Sbjct: 111 TRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +   GA+M+ A +   E L  +GE LG+
Sbjct: 161 GPQDGRDPVDHYLD------VLSGKTGSLVAVSSRFGAMMSGADETVVEVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|297584422|ref|YP_003700202.1| heptaprenyl diphosphate synthase component II [Bacillus
           selenitireducens MLS10]
 gi|297142879|gb|ADH99636.1| heptaprenyl diphosphate synthase component II [Bacillus
           selenitireducens MLS10]
          Length = 323

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A   +        V   +E IH  SL+HDD+  +D+  +RRGK T+ 
Sbjct: 43  GGKRIRPVFVLLSAQFGDYKLDKVKHVAVPLEMIHMGSLVHDDV--IDDAELRRGKKTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +   A EI S         I S  M+ ++          G++  I+
Sbjct: 101 AEWDNRVAMYTGDYMFAKAIEIASKSGNMKLHEILSDAMVEMSI---------GEVEQIK 151

Query: 169 DEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           ++F  +   ++++ + K KT  L+  +CE GA++A A +  + +L+ +G   G+ FQ+ D
Sbjct: 152 EQFNPDQHLRIYLRRIKRKTALLISVSCELGALIAGADETTQMKLKRYGYFTGMAFQITD 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    E++L K
Sbjct: 212 DILDFVGTEKELGK 225


>gi|291615993|ref|YP_003518735.1| IspB [Pantoea ananatis LMG 20103]
 gi|291151023|gb|ADD75607.1| IspB [Pantoea ananatis LMG 20103]
 gi|327396245|dbj|BAK13667.1| octaprenyl-diphosphate synthase IspB [Pantoea ananatis AJ13355]
          Length = 323

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLSARAMGYQGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S       ++R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----MGSLRILALMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|302539319|ref|ZP_07291661.1| predicted protein [Streptomyces sp. C]
 gi|302448214|gb|EFL20030.1| predicted protein [Streptomyces sp. C]
          Length = 336

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 17/219 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGA 77
            L ++L +  +    +H   L +  RYALL  GK +R  L+   A     +    L    
Sbjct: 13  FLAEVLAKEFTRRWPEHAGGLDAVHRYALLPTGKLLRPRLLALSALAVGGSLRAVLPAAV 72

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---- 133
             E  H  SL+HDD+  +D   +RRG+P VH ++    AI+AGN L    F  ++     
Sbjct: 73  GFEAAHTGSLLHDDI--IDQDALRRGRPAVHTEFGPQMAIVAGNALFFTWFTTLAECAAH 130

Query: 134 --PKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
             P  ++   + +Q      +     L+  L G +    D +++      + + KT AL 
Sbjct: 131 GIPHQRIVAAMETQAKAGQQICRGAALELTLAGDLEAPPDVYLE------MARAKTAALF 184

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             AC  GA++   ++++   L  FG++LG  FQ+ DDLL
Sbjct: 185 DAACTVGAVLGGGTEHQIAALGAFGDHLGCAFQIRDDLL 223


>gi|146329727|ref|YP_001209836.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A]
 gi|146233197|gb|ABQ14175.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A]
          Length = 348

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 9/197 (4%)

Query: 41  SAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           S +RYAL   GK+ R  L    A + +     A    A IE IH  +L+HDD+  +D+  
Sbjct: 60  SVMRYALQAKGKRFRPMLHLLSAGVCDYRGDFAPTAAAFIEFIHNATLLHDDV--VDSSD 117

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           IRRG+ + HI +    +I+ G+ L T AF+++ S      +    + M   T+ I    +
Sbjct: 118 IRRGQASAHIIFSNAASILVGDFLYTRAFQLMVSSG----NAAVLKTMADATNLIAAGEV 173

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +  Q+ ++ +  IDET  + + ++KT  L   AC+  A +A  S+ +   L  +G+ LG+
Sbjct: 174 M--QLANMHNPDIDETCYYRVIELKTAVLFSAACKIAAQLAGVSEEKIAALADYGKKLGM 231

Query: 220 IFQLADDLLDCEEDLPK 236
            FQ+ DD+LD   D  K
Sbjct: 232 AFQMIDDMLDYMGDESK 248


>gi|298694759|gb|ADI97981.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 314

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 34  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 91  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 141

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 142 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 201

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 202 IIDDVLD 208


>gi|212709993|ref|ZP_03318121.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM
           30120]
 gi|212687402|gb|EEB46930.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM
           30120]
          Length = 323

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          +    ++V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAGRSLGYSEHKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+A+A+  +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPDITEESYMQVIYSKTARLFEAASHASAILANATPEQEKALQDYGRYIGTAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|147919413|ref|YP_685765.1| putative farnesyltranstransferase [uncultured methanogenic archaeon
           RC-I]
 gi|116077932|emb|CAJ36439.2| putative farnesyltranstransferase [uncultured methanogenic archaeon
           RC-I]
          Length = 314

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 15/196 (7%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   +RYAL   GKKIR+ L+T        N   A+   A +E IH  SL+ DD+  +DN
Sbjct: 35  LAEVVRYALCQKGKKIRASLLTIACEAVGGNIAQAMVPAAVVEMIHNTSLVLDDV--IDN 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNI 154
              RRG+ T++ ++    A+IA + LL       S     + + I    +  MLSL    
Sbjct: 93  AETRRGRSTINHRWGNNMALIACDALLALTIRQASKSSVNMTNAIIECAANSMLSLAEGE 152

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            L+  L G+   ++D        + I + KT +L   + E GA++   +  E + LR +G
Sbjct: 153 ALE--LVGKDYTLKD-------YYKIAERKTASLFSASAEIGALVGGGTSKEVKSLREYG 203

Query: 215 ENLGIIFQLADDLLDC 230
            ++GI FQ+ DD+LD 
Sbjct: 204 TSIGIAFQIRDDILDV 219


>gi|323439529|gb|EGA97250.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           O11]
 gi|323442232|gb|EGA99863.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           O46]
          Length = 314

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 34  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 91  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 141

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 142 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 201

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 202 IIDDVLD 208


>gi|260893125|ref|YP_003239222.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4]
 gi|260865266|gb|ACX52372.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4]
          Length = 320

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 28/226 (12%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           ++++E  +R+       L + A H        LL+A      GGK++R  L   CA    
Sbjct: 13  ARVEEEIRRVVAGAPPPLREAALH--------LLAA------GGKRLRPALALLCAHFGR 58

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    L + AA+E IH  +L+HDD+  +D   +RRG PTVH ++   TAI  G+ L   
Sbjct: 59  YSLERVLPLAAAVELIHMATLVHDDV--IDGAEMRRGIPTVHARWGPETAIKVGDVLFAQ 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKM 183
           A E++SS     +D+  ++ + +   +     M  G+    ++ +  +  V   F   + 
Sbjct: 117 AIELVSS----YEDSAVARKLAATCLS-----MCTGEFAQERESYSPQQSVWRYFRRIRR 167

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT   +  ACE GA +  A     + LR +G  LG+ FQ+ DD+LD
Sbjct: 168 KTALFIGAACELGARVCEAPLVVCQALRQYGLALGMAFQVVDDVLD 213


>gi|21328588|gb|AAM48595.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
           proteobacterium]
 gi|40062988|gb|AAR37858.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
           bacterium 443]
          Length = 292

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 11/210 (5%)

Query: 28  ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCY 85
           A H   Q    L  A+ YA+  GG ++R  +    A   N + +  A    +AIE +HC 
Sbjct: 17  AEHATAQCPPLLAQALNYAVFPGGARVRPKICKAVALANNSSDVGLANAAASAIELLHCA 76

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDDLP  D+   RRGKP+VH ++ E  A++ G+ L+  AF+ +++         R  
Sbjct: 77  SLVHDDLPCFDDATQRRGKPSVHAKFGERIAVLTGDALIVAAFQTLATHAIHAVRTERVP 136

Query: 146 LMLSL-THNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+ ++    +G   G+  GQ  + +   +D ++     + KTGAL   A  +GA  A   
Sbjct: 137 LVTAIVARGVGAPHGICAGQAWECE-RSVDLSR---YHRAKTGALFVAATCAGAAAAGVD 192

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
                 L   G ++G  +Q+ADD+ D   D
Sbjct: 193 PGPWVNL---GASIGEAYQVADDIKDAISD 219


>gi|84515006|ref|ZP_01002369.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
           SKA53]
 gi|84511165|gb|EAQ07619.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
           SKA53]
          Length = 293

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 18/212 (8%)

Query: 27  TASHMQTQHN---DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL--RVGAAIE 80
           TA+  Q Q      +L +A+ YA+  GG +IR  ++   A +   +   AL     AA+E
Sbjct: 12  TAAIAQGQGGVAPPKLAAALNYAVTPGGARIRPTILMSVA-MACGDDRPALTNAAAAALE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +HC SL+HDDLP  D+  +RRGKP +H  + E  A++AG+ L+   F +++  +     
Sbjct: 71  LVHCASLVHDDLPCFDDADMRRGKPALHRAFSEPLAVLAGDSLIIMGFHLLA--RAAGDA 128

Query: 141 NIRSQLMLS-LTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
             R+  +L  L    G+  G+  GQ  + + +      +    + KTGAL   A + GA+
Sbjct: 129 PARAITLLDILGTRTGMPFGICAGQGWESESQI----DLSAYHQAKTGALFIAATQMGAV 184

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              A+  E E     G  +G  FQ+ADDL D 
Sbjct: 185 ---AAGQEAEPWAELGARIGEAFQVADDLRDA 213


>gi|104780055|ref|YP_606553.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48]
 gi|95109042|emb|CAK13738.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48]
          Length = 322

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      Q++   T  I    +L  Q+  ++
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A AS  ++E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEEIYMDVIRGKTAMLFEASTHSAAALAGASDEQREALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|283470681|emb|CAQ49892.1| heptaprenyl diphosphate synthase component II (hepppsynthase
           subunit 2) (spore germination protein c3)
           [Staphylococcus aureus subsp. aureus ST398]
 gi|302333080|gb|ADL23273.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|49483657|ref|YP_040881.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|257425534|ref|ZP_05601959.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257428193|ref|ZP_05604591.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257430823|ref|ZP_05607205.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257433581|ref|ZP_05609939.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257436423|ref|ZP_05612470.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus M876]
 gi|282904051|ref|ZP_06311939.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905816|ref|ZP_06313671.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282908786|ref|ZP_06316604.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282911047|ref|ZP_06318849.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282914259|ref|ZP_06322046.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus M899]
 gi|282924366|ref|ZP_06332040.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus C101]
 gi|283958233|ref|ZP_06375684.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293501285|ref|ZP_06667136.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510246|ref|ZP_06668954.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus M809]
 gi|293526841|ref|ZP_06671525.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus M1015]
 gi|49241786|emb|CAG40477.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257271991|gb|EEV04129.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257275034|gb|EEV06521.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257278951|gb|EEV09570.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257281674|gb|EEV11811.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257284705|gb|EEV14825.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus M876]
 gi|282313753|gb|EFB44146.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus C101]
 gi|282322327|gb|EFB52651.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus M899]
 gi|282324742|gb|EFB55052.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327050|gb|EFB57345.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282331108|gb|EFB60622.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282595669|gb|EFC00633.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus C160]
 gi|283790382|gb|EFC29199.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290920399|gb|EFD97463.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291096290|gb|EFE26551.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291467190|gb|EFF09708.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus M809]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|82751067|ref|YP_416808.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           RF122]
 gi|82656598|emb|CAI81021.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           RF122]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|327311326|ref|YP_004338223.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947805|gb|AEA12911.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
          Length = 347

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 36/245 (14%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           ++   RI+  L   LL+ A+       D    A+ Y +  GGK++R  L    A   + N
Sbjct: 22  EKYGPRIEEALAKYLLRDAA-------DDFKDAVLYQISTGGKRLRPILTLAVAEAVSGN 74

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +  AL   A +E IH YSLI+DD+  +D G +RR KPT    + +  AI+ G        
Sbjct: 75  YERALPAAAIVELIHNYSLIYDDI--IDRGEVRRNKPTTRAAFGDYAAILIGIWYREAIE 132

Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK----- 182
           E ++ +PK        S+    +   I  + +  G+ LDI  E       + ++      
Sbjct: 133 EAVLDTPKP-------SEFAREVAKVI--KAIDEGERLDILFELAGRDDPYFVKARWPSV 183

Query: 183 ----------MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                     +KTGAL+  A + GA+     +   +    FG N GI FQ+ DD+LD   
Sbjct: 184 KLDDYIRMVGLKTGALIAAAAKWGAMSVADDRQLADAAWDFGMNAGIAFQIVDDVLDIFG 243

Query: 233 DLPKK 237
           D PKK
Sbjct: 244 D-PKK 247


>gi|284006654|emb|CBA71916.1| octaprenyl-diphosphate synthase [Arsenophonus nasoniae]
          Length = 323

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIR  +               + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKKIRPMIAILVGRALGYEGKKHINVAALIEFIHTATLLHDDV--VDESTLRRGKKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L D++    ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMM----TEL-DSMPILKLMSDATNVIAEGEVS-QLINCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E+    I   KT  L   A  + AI++ A++ +++ LR +G  LG  FQL DDLL
Sbjct: 155 NPDITESTYMQIIYSKTARLFEAATHASAIVSGANETQQQALRDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|282919182|ref|ZP_06326917.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus C427]
 gi|282316992|gb|EFB47366.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus C427]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|329731320|gb|EGG67686.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|74100794|gb|AAZ99641.1| isoprenyl diphosphate synthase [Streptomyces lividans TK24]
          Length = 336

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GG++ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGERFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++D   A++ G+ L   A +I++    +    +R Q        +  + ++ GQ+L   
Sbjct: 111 TRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+
Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|23501305|ref|NP_697432.1| polyprenyl synthetase family protein [Brucella suis 1330]
 gi|161618375|ref|YP_001592262.1| hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365]
 gi|254703754|ref|ZP_05165582.1| hypothetical protein Bsuib36_07492 [Brucella suis bv. 3 str. 686]
 gi|260566991|ref|ZP_05837461.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
 gi|261754401|ref|ZP_05998110.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
 gi|23347194|gb|AAN29347.1| polyprenyl synthetase family protein [Brucella suis 1330]
 gi|161335186|gb|ABX61491.1| Hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365]
 gi|260156509|gb|EEW91589.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
 gi|261744154|gb|EEY32080.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
          Length = 340

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +    ++ +     +     +Q      M   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGSFDALDVLATSASIIAEGEVMQLAAAKNMETTE 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 177 DEYL------AVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 D 229
           D
Sbjct: 231 D 231


>gi|327400034|ref|YP_004340873.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6]
 gi|327315542|gb|AEA46158.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6]
          Length = 303

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 17/185 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V     L        + V  A+E IH  SL HDD+  +D G +RR   T+H
Sbjct: 39  GGKRTRPIIVLLSGRLCGGEWSEVMNVALAVELIHTASLAHDDV--IDRGVVRRNVETLH 96

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           ++YD   AI+ G+ L++ + E++S    + ++D  R  +M           M  G+++D 
Sbjct: 97  VKYDTSLAILVGDWLISKSVELVSVYNEEVIRDFARVGMM-----------MAEGEIMDI 145

Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             I++    E   F     KT +L  ++ ++   +    +   E L  +G NLGI +QL 
Sbjct: 146 DSIKNGGFGEEDYFKCIAAKTASLFAYSAKNACRIVSDDKKAAEYLFNYGNNLGIAYQLV 205

Query: 225 DDLLD 229
           DDLL+
Sbjct: 206 DDLLE 210


>gi|86748213|ref|YP_484709.1| farnesyltranstransferase [Rhodopseudomonas palustris HaA2]
 gi|86571241|gb|ABD05798.1| Farnesyltranstransferase [Rhodopseudomonas palustris HaA2]
          Length = 336

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMANLTGYAGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G  +A   + E+   R FG N+GI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPAIADRPKAEQSACRSFGMNIGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|29893480|gb|AAO93113.1| geranylgeranyl pyrophosphate synthetase [Rubrivivax gelatinosus]
          Length = 310

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 15/201 (7%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L +AIR+A+  GG +IR  L    A +  + +   A    +AIE IHC SL+HDDLP  
Sbjct: 26  KLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPALADAAASAIELIHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRG+P+VH  Y E  A++AG+ L+  AF+ + +   +  + + + ++ ++   +G
Sbjct: 86  DDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGAAGGRHPERM-AHVLQTVARGVG 144

Query: 156 LQ-GMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              G++ GQ  +       E +V +   Q+ KTGAL   A  +    A AS  + E  R 
Sbjct: 145 TPLGIIAGQAWEC------EPRVALSDYQRAKTGALFAAATAA---GAQASGGDGETWRA 195

Query: 213 FGENLGIIFQLADDLLDCEED 233
            G+ LG  +Q+ADD+ D   D
Sbjct: 196 LGDWLGEAYQVADDVRDALAD 216


>gi|238756420|ref|ZP_04617729.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473]
 gi|238705350|gb|EEP97758.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473]
          Length = 323

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      +++ A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALDYQGNKHIKIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTSLES-----LRVLQLMSEATNVIAEGEVM-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S +I+A AS  ++   + +G  LG  FQL DDLL
Sbjct: 155 NPDITEDSYMRVIYSKTARLFEAASQSSSILADASPEQEMAFQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|297591052|ref|ZP_06949690.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus MN8]
 gi|297575938|gb|EFH94654.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus MN8]
          Length = 332

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 52  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 220 IIDDVLD 226


>gi|315195366|gb|EFU25753.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus CGS00]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|239636857|ref|ZP_04677856.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           warneri L37603]
 gi|239597531|gb|EEQ80029.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           warneri L37603]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 22/212 (10%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIE 80
           L+ A H Q    D++L    + LL  GGK++R   V   +       ++    +V  A+E
Sbjct: 17  LEQAIHSQ----DKVLEEAAFHLLSSGGKRVRPAFVILSSQFGKEEGVSEDTYKVAVALE 72

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  +L+HDD+  +D    RRG+ T+  ++D+ TAII GN LL    + +S  K +   
Sbjct: 73  LIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAIITGNFLLALGLQHLSEIKDKRVH 130

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGA 197
            I S+ ++ +           G++   QD+F   +T    ++++  KT  L+  A E GA
Sbjct: 131 EILSESIVDVCR---------GELFQFQDQFNSQQTMTNYLRRINRKTALLIQLATEVGA 181

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I A +      +L+  G  +G+ FQ+ DD+LD
Sbjct: 182 ITAGSDIKTIHKLKMIGHYIGMSFQIVDDILD 213


>gi|328464568|gb|EGF35937.1| polyprenyl synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 257

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L+   A +    +   + + ++IE +H  +LIHDD  ++D+  +RRG  ++ 
Sbjct: 5   GGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDD--TIDDSDLRRGNISIQ 62

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166
            ++ +  A+ AG+ L T  F+++    T+ +  +R+   +S      L G LG   +  +
Sbjct: 63  AEFGKDVAVYAGDLLFTNFFDLMLDTTTEHEYLVRNAQTMSHI----LNGELGQMAERFN 118

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           ++  F D        K KT AL   A E GA  A  +  +   L  FGENLGI FQ+ DD
Sbjct: 119 LEQTFTDYLNDI---KGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAFQIVDD 175

Query: 227 LLD 229
           LLD
Sbjct: 176 LLD 178


>gi|87310419|ref|ZP_01092549.1| polyprenyl synthase [Blastopirellula marina DSM 3645]
 gi|87286918|gb|EAQ78822.1| polyprenyl synthase [Blastopirellula marina DSM 3645]
          Length = 309

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 16/189 (8%)

Query: 47  LLGGKKIRSFLVTE----CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +LGGK++R  L+      C  + + ++     +GA IE IH  +L+HDD+  +D    RR
Sbjct: 28  MLGGKRMRPALLLLAAKACGQVTDAHYT----LGAVIEMIHTATLVHDDV--LDEADQRR 81

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
              TV+ +++  T+++ G+ L ++AF + +   T       +  M+  + NI  +G L  
Sbjct: 82  HLATVNSRWNNETSVLLGDFLFSHAFYLATMLPTTC-----AARMIGRSTNIVCEGELR- 135

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+   Q     E +   I   KT  L   ACE GA  A AS+ +   L  FG +LGI FQ
Sbjct: 136 QIASRQAFETTEEEYLAIIDAKTAELCACACELGARYAEASEEQIAALEKFGRDLGIAFQ 195

Query: 223 LADDLLDCE 231
           +ADDLLD E
Sbjct: 196 IADDLLDVE 204


>gi|302554703|ref|ZP_07307045.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
 gi|302472321|gb|EFL35414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
          Length = 344

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 17/219 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL--TALRVGAAI 79
           D L +  SH+   H     +  R     GK +R  L   CA          +A+ V  A+
Sbjct: 30  DALPEEISHIVGYHIGWWDANGRPCEQKGKYVRPTLAVACARAIGGEAAVKSAIPVAVAV 89

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H +SL+HDD+  MD G +RR +PT    +    A++AG+ L+  A+ +++S      
Sbjct: 90  ELVHDFSLLHDDV--MDEGTVRRHRPTAWSLFGTSKAVLAGDLLVAEAYRLLASSGCDDP 147

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACE 194
           + +  +++    H++ +     GQ +D+   F D  +V + +       KT AL+  ACE
Sbjct: 148 ERL-VKILAQAVHDLCV-----GQAMDLA--FEDRVEVTLAETNAMVSGKTSALIAAACE 199

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            GA+ A A       +  FG +LG++FQL DD+L    D
Sbjct: 200 LGALTAGADAEAAAVMCAFGGHLGMLFQLVDDILGVWGD 238


>gi|239831276|ref|ZP_04679605.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239823543|gb|EEQ95111.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 356

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 75  GGKRLRPMMTLAAARMFGYEGDGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTAR 132

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +    ++ +     +     +Q      M   +
Sbjct: 133 MIWGNQASVLVGDFLLGQAFKMMVDVGSLDALDVLATSASVIAEGEVMQLAAAKNMETTE 192

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + K KT AL   A E G I+A A   ++  LR +G NLG+ FQL DD L
Sbjct: 193 DEYL------AVIKAKTAALFSAAGEVGPIIAGARPADRVALRDYGLNLGLAFQLVDDAL 246

Query: 229 D 229
           D
Sbjct: 247 D 247


>gi|295427978|ref|ZP_06820610.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|295128336|gb|EFG57970.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus EMRSA16]
          Length = 322

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 42  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 99  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 149

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 150 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 209

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 210 IIDDVLD 216


>gi|253732112|ref|ZP_04866277.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253724159|gb|EES92888.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 332

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 52  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 220 IIDDVLD 226


>gi|312438127|gb|ADQ77198.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 332

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 52  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 220 IIDDVLD 226


>gi|87160661|ref|YP_494056.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195203|ref|YP_500004.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|269203095|ref|YP_003282364.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|87126635|gb|ABD21149.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202761|gb|ABD30571.1| heptaprenyl diphosphate syntase component II, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|262075385|gb|ACY11358.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|302751300|gb|ADL65477.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
          Length = 314

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 34  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 91  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 141

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 142 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 201

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 202 IIDDVLD 208


>gi|21283088|ref|NP_646176.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49486309|ref|YP_043530.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MSSA476]
 gi|21204528|dbj|BAB95224.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49244752|emb|CAG43188.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MSSA476]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|238793005|ref|ZP_04636634.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909]
 gi|238727605|gb|EEQ19130.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909]
          Length = 323

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALHYEGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLES-----LRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A A++ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADATETQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|261406506|ref|YP_003242747.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
 gi|261282969|gb|ACX64940.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
          Length = 794

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 17/202 (8%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L+ A  Y+L G GK++R  L    A   + +     + +  ++E +H  SLI DDLPS D
Sbjct: 534 LIDAANYSLEGDGKRLRPILTWVMAVKEYGLQATAIVPLLRSLEYMHTASLIFDDLPSQD 593

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLSLT 151
           N   RRG+PT+H  +D  TA I G  L+  A E  SS     PKT LK      L+   +
Sbjct: 594 NASTRRGRPTLHQVHDSATAEITGLFLIQKAIEEQSSLEGFDPKTVLK------LIRYSS 647

Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G   M  GQ +D+  + + +   Q+  +   KTG     +    AI+A   + E   
Sbjct: 648 QRAG--DMCSGQAMDLNSKGKALSLEQLNTVCYYKTGIAFEASLVMPAILAQVKETEIAI 705

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
           L+ F  + GI FQ+ DDLLD +
Sbjct: 706 LKKFAYHAGIAFQIQDDLLDVQ 727


>gi|7416783|dbj|BAA94032.1| phytoene synthase [Rubrivivax gelatinosus]
          Length = 310

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 15/201 (7%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L +AIR+A+  GG +IR  L    A +  + +   A    +AIE IHC SL+HDDLP  
Sbjct: 26  KLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPALADAAASAIELIHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRG+P+VH  Y E  A++AG+ L+  AF+ + +   +  + + + ++ ++   +G
Sbjct: 86  DDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLGAAGGRHPERM-AHVLQTVARGVG 144

Query: 156 LQ-GMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              G++ GQ  +       E +V +   Q+ KTGAL   A  +    A AS  + E  R 
Sbjct: 145 TPLGIIAGQAWEC------EPRVALSDYQRAKTGALFAAATAA---GAQASGGDGETWRA 195

Query: 213 FGENLGIIFQLADDLLDCEED 233
            G+ LG  +Q+ADD+ D   D
Sbjct: 196 LGDWLGEAYQVADDVRDALAD 216


>gi|15924460|ref|NP_371994.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|15927051|ref|NP_374584.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus N315]
 gi|57650425|ref|YP_186354.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|148267954|ref|YP_001246897.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394018|ref|YP_001316693.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979789|ref|YP_001442048.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|161509637|ref|YP_001575296.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|221140963|ref|ZP_03565456.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253315977|ref|ZP_04839190.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|255006256|ref|ZP_05144857.2| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus Mu50-omega]
 gi|257795475|ref|ZP_05644454.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9781]
 gi|258413283|ref|ZP_05681559.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9763]
 gi|258420610|ref|ZP_05683552.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9719]
 gi|258426805|ref|ZP_05688025.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9299]
 gi|258444803|ref|ZP_05693132.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A8115]
 gi|258447363|ref|ZP_05695507.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A6300]
 gi|258449752|ref|ZP_05697853.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A6224]
 gi|258451128|ref|ZP_05699163.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A5948]
 gi|258454578|ref|ZP_05702542.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A5937]
 gi|282892966|ref|ZP_06301201.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
           A8117]
 gi|282921716|ref|ZP_06329433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765]
 gi|282927997|ref|ZP_06335606.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102]
 gi|284024468|ref|ZP_06378866.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 132]
 gi|296275333|ref|ZP_06857840.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus MR1]
 gi|13701269|dbj|BAB42563.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus N315]
 gi|14247241|dbj|BAB57632.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|57284611|gb|AAW36705.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|147741023|gb|ABQ49321.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946470|gb|ABR52406.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721924|dbj|BAF78341.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|160368446|gb|ABX29417.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|257789447|gb|EEV27787.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9781]
 gi|257839847|gb|EEV64315.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9763]
 gi|257843558|gb|EEV67965.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9719]
 gi|257849966|gb|EEV73924.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9299]
 gi|257850296|gb|EEV74249.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A8115]
 gi|257853554|gb|EEV76513.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A6300]
 gi|257857000|gb|EEV79900.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A6224]
 gi|257861183|gb|EEV83996.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A5948]
 gi|257862961|gb|EEV85725.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A5937]
 gi|269940961|emb|CBI49345.1| putative heptaprenyl diphosphate synthasecomponent II
           [Staphylococcus aureus subsp. aureus TW20]
 gi|282590294|gb|EFB95374.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102]
 gi|282593978|gb|EFB98967.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765]
 gi|282764963|gb|EFC05088.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
           A8117]
 gi|285817150|gb|ADC37637.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus 04-02981]
 gi|312829860|emb|CBX34702.1| heptaprenyl diphosphate synthase component 2 (HEPPPsynthase subunit
           2) (Spore germination protein C3) [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129185|gb|EFT85180.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|315197784|gb|EFU28118.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|329314146|gb|AEB88559.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus T0131]
 gi|329723204|gb|EGG59735.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus 21189]
 gi|329727672|gb|EGG64128.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus 21172]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|297207871|ref|ZP_06924304.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300911956|ref|ZP_07129399.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|296887445|gb|EFH26345.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886202|gb|EFK81404.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 332

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 52  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 220 IIDDVLD 226


>gi|163732321|ref|ZP_02139767.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149]
 gi|161394619|gb|EDQ18942.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149]
          Length = 333

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L   +    + + A +E IH  +L+H
Sbjct: 33  MASKHAPRIPEVTAHLVDAGGKRLRPMLTLATAHLCGYDGPFHINLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L + +F+++    +    +I +    +
Sbjct: 93  DDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ +   Q L   +E         + + KT AL   A E G ++A A  ++   
Sbjct: 151 IAEGEVLQ-LTASQNLATTEEIY-----LQVVRGKTAALFSAATEVGGVIAGAPDDQVAA 204

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LG+ FQ+ DDLLD + D
Sbjct: 205 LFEYGDALGVAFQIVDDLLDFQGD 228


>gi|91975694|ref|YP_568353.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB5]
 gi|91682150|gb|ABE38452.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB5]
          Length = 336

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPILTLAMANLTGYAGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G  +A   + E+   R FG N+GI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPTIADRPKAEQSACRSFGMNIGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|332881619|ref|ZP_08449267.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp.
           oral taxon 329 str. F0087]
 gi|332680258|gb|EGJ53207.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp.
           oral taxon 329 str. F0087]
          Length = 323

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 106/201 (52%), Gaps = 16/201 (7%)

Query: 34  QH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           QH N  L+ A+R+ L   GK +R  L    A  +   + + L    ++E +H  SL+HDD
Sbjct: 27  QHQNPLLMIALRHVLSRKGKLMRPILTLLAAKKYGEINDSVLHAAVSLEMLHTASLVHDD 86

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D   +RRG+ +V+   D   A++ G+ LL+ A +        +  ++R   ++ L 
Sbjct: 87  V--VDESGVRRGQSSVNALLDNKAAVLVGDYLLSTALK-----HAAMAGDLR---VVDLV 136

Query: 152 HNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             +G Q +  G   Q+ +++ + I E Q F + + KT +L     E GA+++ AS++E  
Sbjct: 137 ARLG-QTLSDGELQQLSNVKSDEISENQYFNVIRRKTASLFAVCAEVGALLSGASEDEIR 195

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           RL  FG  +GI FQ+ DD+ D
Sbjct: 196 RLGEFGTYVGICFQIRDDVFD 216


>gi|282916736|ref|ZP_06324494.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus D139]
 gi|283770541|ref|ZP_06343433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus H19]
 gi|282319223|gb|EFB49575.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus D139]
 gi|283460688|gb|EFC07778.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus H19]
          Length = 319

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDKQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|151221591|ref|YP_001332413.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|294848433|ref|ZP_06789179.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754]
 gi|295407219|ref|ZP_06817019.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819]
 gi|297244643|ref|ZP_06928526.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796]
 gi|150374391|dbj|BAF67651.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|294824459|gb|EFG40882.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754]
 gi|294967932|gb|EFG43961.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819]
 gi|297178673|gb|EFH37919.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796]
          Length = 322

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 42  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 99  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 149

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 150 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 209

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 210 IIDDVLD 216


>gi|319651348|ref|ZP_08005477.1| HepT protein [Bacillus sp. 2_A_57_CT2]
 gi|317396879|gb|EFV77588.1| HepT protein [Bacillus sp. 2_A_57_CT2]
          Length = 320

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A     +      V  ++E IH  SL+HDD+  +D+  +RRG+PT+ 
Sbjct: 43  GGKRIRPVFVLLAAKFGEYDIDKIKNVAVSLELIHMASLVHDDV--IDDAELRRGQPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +   A E+I++ K      I S  ++ L           G++  I+
Sbjct: 101 AKWDNKIAMYTGDYIFARALELITNIKNPHAHKILSHTLVELCI---------GEIEQIK 151

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  +  +   F   K KT  L+  +C+ G I A+  ++  ++L  FG  +G+ +Q+ D
Sbjct: 152 DKYNYDQNIRTYFRRIKRKTAMLIAVSCQLGGIAANVEEDIHKKLFKFGYFVGMSYQIID 211

Query: 226 DLLD 229
           D+LD
Sbjct: 212 DVLD 215


>gi|114771291|ref|ZP_01448711.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha
           proteobacterium HTCC2255]
 gi|114548216|gb|EAU51103.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha
           proteobacterium HTCC2255]
          Length = 329

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +        + + A +E IH  +L+HDD+  +D    RRG+PT +
Sbjct: 48  GGKRLRPLLTLAAAEMCGNTSPYHIHLAATVEFIHTATLLHDDV--VDESKQRRGRPTAN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +D  ++++ G+ L + +F+++         +I +    ++     LQ  +   +   +
Sbjct: 106 LLWDNQSSVLVGDYLFSRSFQLMVETGNLRVLDILANASATIAEGEVLQLTVAQNLSTTE 165

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D ++       + + KT AL   AC+ G ++++A +   + L  +G+ LG+ FQ+ DDLL
Sbjct: 166 DTYL------KVIRGKTAALFGAACKVGGVISNAEEKIIDALASYGDALGVCFQITDDLL 219

Query: 229 D 229
           D
Sbjct: 220 D 220


>gi|255624003|ref|XP_002540427.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223495850|gb|EEF21956.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 263

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 9/159 (5%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D   +RRG+ T + ++    +++ G+ L + AF+++     +L
Sbjct: 45  IEFIHTATLLHDDV--VDISSLRRGRATANAKWGNAPSVLVGDFLYSRAFQLL----VEL 98

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                  LM   T+ I    +L  Q+    D   DE   F + + KT  L   A E  AI
Sbjct: 99  GSMPLMSLMADTTNTIAEGEVL--QLTKAGDPATDEEAYFSVIESKTAVLFAAATEGAAI 156

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           ++ AS  +  R R +G NLG  FQLADD+LD   D P+K
Sbjct: 157 LSGASTEDAARWRRYGLNLGNAFQLADDVLDYLGD-PEK 194


>gi|253733283|ref|ZP_04867448.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|304380947|ref|ZP_07363606.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|253728823|gb|EES97552.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|304340533|gb|EFM06468.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|320140359|gb|EFW32215.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142714|gb|EFW34517.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 332

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 52  GGKRVRPAFVI-LSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 108

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 109 TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 159

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 160 QFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 219

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 220 IIDDVLD 226


>gi|156935711|ref|YP_001439627.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533965|gb|ABU78791.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894]
          Length = 323

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALGYEGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQCSGILAGASEAQERALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|144898411|emb|CAM75275.1| Polyprenyl synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 346

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   +    +++ A +E IH  +L+HDD+  +D   +RRG+ + +
Sbjct: 65  GGKRLRPVLTLASAKLAGHSGERHVKLAACVEFIHTATLLHDDV--VDESELRRGQASAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + +FE++      ++D     L +LS   ++  +G +  Q++  
Sbjct: 123 ALFGNKPSVLVGDFLFSRSFELM------VEDGSLPVLAILSRASSVIAEGEVL-QLITA 175

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     + + KT AL   AC  GAI+A   + E++ L  +G NLGI FQL DD+
Sbjct: 176 NDTDTSEDSYLEVIRSKTAALFAAACRIGAIVADRPKAEEDALDSYGLNLGIAFQLIDDV 235

Query: 228 LD 229
           LD
Sbjct: 236 LD 237


>gi|320536661|ref|ZP_08036676.1| polyprenyl synthetase [Treponema phagedenis F0421]
 gi|320146483|gb|EFW38084.1| polyprenyl synthetase [Treponema phagedenis F0421]
          Length = 399

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 90/187 (48%), Gaps = 15/187 (8%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+ R  +    A L   +   A  +   IE IH  SLIHDD+   D+   RRG P 
Sbjct: 112 LRGGKRWRPLVAVLSAELACGDAYRAYALTPVIEFIHTASLIHDDIE--DSAETRRGAPA 169

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQM 164
           +HIQY   TAI A + L  +A  II++  +       S+L LSL  T N  L  +  GQ 
Sbjct: 170 IHIQYGTDTAINAASWLYFHAMSIINAYPSS------SELKLSLYRTVNKNLTNLHLGQA 223

Query: 165 LDI----QDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +DI       FI     +M    +KTG+L   A E G +   A +   E+     E++GI
Sbjct: 224 MDIDWHRNSNFIPSRAEYMAMIALKTGSLARLAAEIGFLAGGAGEEATEQYGKTMESIGI 283

Query: 220 IFQLADD 226
            FQ+ DD
Sbjct: 284 GFQILDD 290


>gi|260912975|ref|ZP_05919460.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325]
 gi|260632965|gb|EEX51131.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325]
          Length = 358

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 10/200 (5%)

Query: 32  QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           Q   N  L++ + Y ++  GGK+IR  +    A          +     IE IH  +L+H
Sbjct: 59  QLNSNVALINQLGYYIIQSGGKRIRPMIAILAARALGYTSDEPITCATFIEFIHTATLLH 118

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRG PT + ++    +++ G+ + T AF+++    TQL +++R   ++S
Sbjct: 119 DDV--VDESELRRGNPTANAEFGNAASVLVGDFIYTRAFQLM----TQL-NSLRILKVMS 171

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              N+  +G +  Q++++ D    E     +   KT  L   A    AI+A A+  +++ 
Sbjct: 172 DATNVIAEGEVQ-QLMNVNDPNTTEENYMQVIYGKTARLFEAATHCSAILAKATAAQEKA 230

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L+ +G  LG  FQL DD+LD
Sbjct: 231 LQDYGRYLGTAFQLVDDILD 250


>gi|258422499|ref|ZP_05685407.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9635]
 gi|257847256|gb|EEV71262.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9635]
          Length = 319

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   V   +S F  +  T+    +V  A+E IH  +L+HDD+  +D    RRGK 
Sbjct: 39  GGKRVRPAFVI-LSSQFGKDDQTSEQTYQVAVALELIHMATLVHDDV--IDKSDKRRGKL 95

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++D+ TAI+ GN LL    E + +    +KDN   QL+     +  +  +  G++ 
Sbjct: 96  TISKKWDQTTAILTGNFLLALGLEHLMA----VKDNRVHQLI-----SESIVDVCRGELF 146

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             QD+F   +T +  ++++  KT  L+  + E GAI + + +    +L+  G  +G+ FQ
Sbjct: 147 QFQDQFNSQQTIINYLRRINRKTALLIQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQ 206

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 207 IIDDVLD 213


>gi|110680572|ref|YP_683579.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114]
 gi|109456688|gb|ABG32893.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114]
          Length = 333

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A L   +    + + A +E IH  +L+H
Sbjct: 33  MASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAHLCGYDGPFHINLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L + +F+++    +    +I +    +
Sbjct: 93  DDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLMVETGSLRVLDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ +   Q L   +E         + + KT AL   A E G ++A A  +    
Sbjct: 151 IAEGEVLQ-LTASQNLATTEEVY-----LQVVRGKTAALFSAATEVGGVIAGAPDDHVAA 204

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L  +G+ LGI FQ+ DDLLD + D
Sbjct: 205 LFEYGDALGIAFQIVDDLLDFQGD 228


>gi|268324511|emb|CBH38099.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
           archaeon]
          Length = 343

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 21/233 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MNG    + QE  +  +  + +++ Q    MQ   N+ +  A+ Y    GGK++R  L  
Sbjct: 1   MNG---QQFQEEVQYFNCRMGEVIEQ---KMQRCSNEIIHDALSYIRDTGGKRLRPILCL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   A+    AIE +H  SL+HDD+  +D+ Y+RR  P+    Y E  AI+ 
Sbjct: 55  LSAEAVGGSREKAMTTAIAIELLHNASLVHDDI--IDDNYVRRKSPSNPAMYGEKKAIVI 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
           G+ L   + E+++  K  + + +   L+ S   +I +     G+ L+     + ET  Q 
Sbjct: 113 GDFLFGISCEMLA--KCGVPEVV--GLVSSAVSDIAM-----GEYLEFSLRTLQETTEQS 163

Query: 178 FM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +M +  +KT +    + E+GA++   S+ E    R +G+N+GI FQ+ DD+LD
Sbjct: 164 YMEVATLKTASTFMASAEAGAMLGGGSEAEIANFRNYGKNVGIAFQIQDDILD 216


>gi|320101826|ref|YP_004177417.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644]
 gi|319749108|gb|ADV60868.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644]
          Length = 346

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 12/182 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALR--VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK++R  LV  C     V  LT     + A +E IH  +L+HDD+  +D   +RR   T+
Sbjct: 68  GKRLRPALVLLCGQ--AVGRLTPDHPVLAAVVEMIHTATLVHDDI--LDESLVRRHAATI 123

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++   TA++ G+ L T+AF + +S ++ L         +    N+  +G +  Q+   
Sbjct: 124 NAEWGNETAVLLGDYLFTHAFHLAASLESTLACR-----WIGRATNLVCEGEMN-QVHHR 177

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +DE+    I + KT  L+  +C+ GA  A A     ERL  FG +LG  FQ+ADD+
Sbjct: 178 GDLDLDESTYLDIIQGKTAELIAVSCKLGAHYAGADVETTERLERFGRDLGSAFQIADDV 237

Query: 228 LD 229
           LD
Sbjct: 238 LD 239


>gi|37528362|ref|NP_931707.1| octaprenyl diphosphate synthase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787800|emb|CAE16915.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 323

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    + +        + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPIIAILASRVLGYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++++      +++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AMFGNAASVLVGDFIYTRSFQMMTA-----LNSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  S AI+++A+  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPNISEDDYMRVIYSKTARLFEVAAHSSAILSNATPEQEMALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|315658247|ref|ZP_07911119.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis
           M23590]
 gi|315496576|gb|EFU84899.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis
           M23590]
          Length = 335

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 28/223 (12%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT 71
           K+++ +L+ ++         + ND +L      LL  GGK++R   V   +S F  +  +
Sbjct: 28  KKVNNLLEQII---------KSNDTVLEEASLHLLSSGGKRVRPAFVI-LSSQFGKSKQS 77

Query: 72  --ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
               +V  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL    E
Sbjct: 78  EDTYKVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLE 135

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTG 186
            +S       ++ R   ++S +    +  +  G++   QD+F  ++T    ++++  KT 
Sbjct: 136 QLSEV-----NHPRIHTIISTS----IVDVCRGELFQFQDQFNSNQTISNYLRRINRKTA 186

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            L+  A E GA+ ++ASQ    +L+  G  +G+ FQ+ DD+LD
Sbjct: 187 LLIQLATEVGALTSNASQQTVYKLKMIGHYIGMSFQIIDDILD 229


>gi|323136700|ref|ZP_08071781.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
 gi|322398017|gb|EFY00538.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
          Length = 336

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A +        L+  A IE +H  +L+HDD+  +D   +RRGK    
Sbjct: 55  GGKRLRPMLVLATAGMCGYKGDGHLKFAAGIEFMHTATLLHDDV--VDESNMRRGKIAAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
           + +   T ++ G+ LL +AF+++  P       + SQ    +           G++L + 
Sbjct: 113 MLWGNQTCVLVGDFLLGHAFKMMVEPGMVPPLTVVSQAAAVIAE---------GEILQLN 163

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +D    E     + + KT  L   A E G ++A+  + ++   R +G NLGI FQL D
Sbjct: 164 AAKDTTTTEDAYMAVIRRKTAELFAAAAEVGVMLANKPKADEAAARSYGMNLGIAFQLID 223

Query: 226 DLLD 229
           D LD
Sbjct: 224 DALD 227


>gi|329926952|ref|ZP_08281352.1| polyprenyl synthetase [Paenibacillus sp. HGF5]
 gi|328938782|gb|EGG35158.1| polyprenyl synthetase [Paenibacillus sp. HGF5]
          Length = 809

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 17/204 (8%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + L+ A  Y+L G GK++R  L    A   + +     + +  ++E +H  SLI DDLPS
Sbjct: 547 ESLIDAANYSLEGDGKRLRPILTWVMAVKEYGLQASAIVPLLRSLEYMHTASLIFDDLPS 606

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-----PKTQLKDNIRSQLMLS 149
            DN   RRG+PT+H  +D  TA I G  L+  A E  SS     PKT LK      L+  
Sbjct: 607 QDNASTRRGRPTLHQVHDSATAEITGLFLIQKAIEEQSSLEGFDPKTVLK------LIRY 660

Query: 150 LTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            +   G   M  GQ +D+  + + +   Q+  +   KTG     +    AI+A   + E 
Sbjct: 661 SSQRAG--DMCSGQAMDLNSKGKALSLEQLNTVCYYKTGIAFEASLVMPAILAQVKETEI 718

Query: 208 ERLRCFGENLGIIFQLADDLLDCE 231
             L+ F  + GI FQ+ DDLLD +
Sbjct: 719 AILKKFAYHAGIAFQIQDDLLDVQ 742


>gi|255693279|ref|ZP_05416954.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
 gi|260620958|gb|EEX43829.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
          Length = 324

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK +R  LV   A L++V   + L    ++E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  NGKMMRPILVLLVARLYDVVRPSTLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
             ++   A++ G+ LL  A  ++ + +T      +S L++ L   +G Q +  G++L   
Sbjct: 102 AIFNNKVAVLTGDYLL--ATSLVHAEQT------KSHLIIRLVSLLG-QDLADGELLQLS 152

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           ++ +    E+  F + + KT AL     ++ A+   A++ E E  R  GE +GI FQ+ D
Sbjct: 153 NVSNHSFSESVYFDVIRKKTAALFAACTKAAALSVDANEEEAEFARLLGEYIGICFQIKD 212

Query: 226 DLLD 229
           D+ D
Sbjct: 213 DIFD 216


>gi|294507897|ref|YP_003571955.1| polyprenyl synthetase [Salinibacter ruber M8]
 gi|294344225|emb|CBH25003.1| polyprenyl synthetase [Salinibacter ruber M8]
          Length = 343

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 14/192 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ + L  GGK++R  L+   A  +  +   AL    A+E  H ++L+HDDL  MD 
Sbjct: 48  LYDAVEHVLRAGGKRVRPVLLLLVAQSYGTSVDRALPAALAVEVFHNFTLVHDDL--MDE 105

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG  TVH +++  TAI+AG+ ++  +++++        +   ++ + ++ H + ++
Sbjct: 106 DDERRGGATVHAKWNPGTAILAGDLMMGLSYDLLGQ-----VEGTDAEALYAVYHPM-VE 159

Query: 158 GMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +  GQ LD   E  D    E  + MI + KTGAL+  A E G+++  A   E++RL   
Sbjct: 160 RLCAGQALDASFETDDAVTVEAYLDMIDR-KTGALLSAAFELGSVIGGAPSPERDRLGTA 218

Query: 214 GENLGIIFQLAD 225
           G  +G  FQ+ D
Sbjct: 219 GRLVGRAFQIQD 230


>gi|167465350|ref|ZP_02330439.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 253

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 16/193 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +++ Y   GGK+IR   V       + +      +   +E IH  SL+HDD+  +D+   
Sbjct: 35  ASLLYLKAGGKRIRPVFVLLAGEFGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAET 92

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGK TV  ++D   A+  G+ +   A  +++  K      I S+ M+ ++         
Sbjct: 93  RRGKATVRSKWDNRIAMYTGDYVYAKALTLVTELKNPAIHQIMSKAMIEMSI-------- 144

Query: 161 GGQMLDIQDEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            G+M  I+  F +  Q         K KT  L+  +C+ GA+ A AS+N  +RL  FG  
Sbjct: 145 -GEMEQIR-LFFEHGQTLRDYLRRIKRKTALLIAVSCQLGAMTAEASENYAKRLFHFGYY 202

Query: 217 LGIIFQLADDLLD 229
           +G+ FQ+ DD+LD
Sbjct: 203 VGMAFQIRDDILD 215


>gi|88604119|ref|YP_504297.1| farnesyltranstransferase [Methanospirillum hungatei JF-1]
 gi|88189581|gb|ABD42578.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Methanospirillum hungatei JF-1]
          Length = 320

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 29/235 (12%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + L++ +  ++++L D      + +    N  L +       GGK++R  L    A  
Sbjct: 3   LETYLKKTADEVNSLLQDCYGDPKTALSRAANHLLFA-------GGKRLRPALFKLAADA 55

Query: 65  FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    ++ G A+E  H ++LIHDD+  MD    RRG+ TVH  + E  AI+AG+ L
Sbjct: 56  VTPGASQKIMQAGLALEVTHNFTLIHDDI--MDKDVYRRGQKTVHTLWGEPAAILAGDVL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QDEFIDE 174
              AF +I + +      +R+  +L+ T     + +  GQ  D+         +DE++D 
Sbjct: 114 YARAFFLICNAEAPEGAKVRAISLLART----CEEICEGQQQDMSFEEREDVTRDEYLD- 168

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               MI K KTG L   A   G+++A  S+ + + L  +G  +G  FQ+ DDL+D
Sbjct: 169 ----MITK-KTGVLYGAAAAIGSLLAGGSEAQVDALYTYGCKIGAAFQIQDDLID 218


>gi|325955525|ref|YP_004239185.1| trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922]
 gi|323438143|gb|ADX68607.1| Trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922]
          Length = 325

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 16/201 (7%)

Query: 34  QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           + N  LL  I Y ++   GK++R   V   A +    +    R  + IE IH  +L+HDD
Sbjct: 28  KSNVSLLDRITYYIVRRKGKQMRPMFVFLIAKMLGEVNEKTYRAASFIELIHTATLVHDD 87

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D+ ++RRG  +++  +    A++ G+  L+    IIS   TQ KD       L  T
Sbjct: 88  V--VDDSHMRRGFFSLNALWKNKIAVLVGDYFLSKTL-IIS---TQNKD-----FDLLET 136

Query: 152 HNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            ++ ++ +  G++L I+      I E   F I +MKT  L+   C++GA+   +     E
Sbjct: 137 VSVAIKEISEGELLQIEKARKLDITEEVYFEIIRMKTATLIAACCKAGALSVSSDNMVAE 196

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           RL  FGE +GI FQ+ DDL D
Sbjct: 197 RLHKFGELVGIAFQIKDDLFD 217


>gi|322381820|ref|ZP_08055774.1| heptaprenyl diphosphate synthase component II-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321154208|gb|EFX46530.1| heptaprenyl diphosphate synthase component II-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 324

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 16/193 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +++ Y   GGK+IR   V       + +      +   +E IH  SL+HDD+  +D+   
Sbjct: 35  ASLLYLKAGGKRIRPVFVLLAGEFGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAET 92

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGK TV  ++D   A+  G+ +   A  +++  K      I S+ M+ ++         
Sbjct: 93  RRGKATVRSKWDNRIAMYTGDYVYAKALTLVTELKNPAIHQIMSKAMIEMSI-------- 144

Query: 161 GGQMLDIQDEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            G+M  I+  F +  Q         K KT  L+  +C+ GA+ A AS+N  +RL  FG  
Sbjct: 145 -GEMEQIR-LFFEHGQTLRDYLRRIKRKTALLIAVSCQLGAMTAEASENYAKRLFHFGYY 202

Query: 217 LGIIFQLADDLLD 229
           +G+ FQ+ DD+LD
Sbjct: 203 VGMAFQIRDDILD 215


>gi|70732635|ref|YP_262398.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
 gi|68346934|gb|AAY94540.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
          Length = 322

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMRILSQATRIIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A++ + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALAGATEEQAEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|83816814|ref|YP_445986.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
 gi|83758208|gb|ABC46321.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
          Length = 342

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 14/192 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+ + L  GGK++R  L+   A  +  +   AL    A+E  H ++L+HDDL  MD 
Sbjct: 47  LYDAVEHVLRAGGKRVRPVLLLLVAQSYGTSVDRALPAALAVEVFHNFTLVHDDL--MDE 104

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG  TVH +++  TAI+AG+ ++  +++++        +   ++ + ++ H + ++
Sbjct: 105 DDERRGGATVHAKWNPGTAILAGDLMMGLSYDLLGQ-----VEGTDAEALYAVYHPM-VE 158

Query: 158 GMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +  GQ LD   E  D    E  + MI + KTGAL+  A E G+++  A   E++RL   
Sbjct: 159 RLCAGQALDASFETDDAVTVEAYLDMIDR-KTGALLSAAFELGSVIGGAPSPERDRLGTA 217

Query: 214 GENLGIIFQLAD 225
           G  +G  FQ+ D
Sbjct: 218 GRLVGRAFQIQD 229


>gi|239980128|ref|ZP_04702652.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291451984|ref|ZP_06591374.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291354933|gb|EFE81835.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 336

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   + +    +  G  +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRLRPLLVMLAAQFGDPDAPGIVPSGVVVELTHLATLYHDDV--MDEAEVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++D   A++ G+ L   A  I++    +    +R Q           + ++ GQ++   
Sbjct: 111 ARWDNSVAVLTGDFLFARASHILADLGPE---AVRVQAE-------AFERLVTGQIMETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  A   GA+M+ A +   + L  +GE LG+
Sbjct: 161 GPRDGRDPVDHYLD------VLGGKTGSLIAVAGRFGAMMSGADERVVDILTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|260905104|ref|ZP_05913426.1| farnesyl pyrophosphate synthetase [Brevibacterium linens BL2]
          Length = 336

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 19/186 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  L+   A L   N    +    A+E IH  SL HDD+  MD+  +RRG P  H
Sbjct: 54  GGKRARPNLLLLTARLGEANRDAIIDAAVAVELIHLASLYHDDV--MDDAPVRRGAPAAH 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
             +    AI+ G+ L + A  + +   P+      +R Q           + ++ GQ+ +
Sbjct: 112 EVWGNSVAILTGDLLFSKASGVTAKLGPEA-----VRVQAET-------FERLVLGQLNE 159

Query: 167 IQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                 D   +   IQ +  KTG+L+  + + G + + A Q+  E +R FGE +GI FQL
Sbjct: 160 FAGPPEDADAIEHYIQVLADKTGSLIATSAQFGVMFSQADQSLAEPVRIFGERVGIAFQL 219

Query: 224 ADDLLD 229
           ADD++D
Sbjct: 220 ADDIID 225


>gi|313472484|ref|ZP_07812976.1| polyprenyl synthetase family protein [Lactobacillus jensenii 1153]
 gi|313449165|gb|EEQ68919.2| polyprenyl synthetase family protein [Lactobacillus jensenii 1153]
          Length = 319

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 25/219 (11%)

Query: 32  QTQH--NDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           QT H  N  L SA++  A  GGK +R  LV   A      +   +++  AIE +H  +LI
Sbjct: 20  QTMHAPNKNLESALKEMADNGGKYLRPSLVLLAAHAVGKTNKQIIQIATAIETLHMATLI 79

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D+   RRGKP++   + +  A+ AG+ L T  F+++          + +Q M 
Sbjct: 80  HDDV--IDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNEPEYLRLNAQTMR 137

Query: 149 SLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            +     L G LG   Q  +++  F D        K KT  L   A E GA  A  +  +
Sbjct: 138 QI-----LNGELGQMNQRFNLEQTFDDYLADI---KGKTATLFRLAAEEGAHFAGGNLEQ 189

Query: 207 KERLRCFGENLGIIFQLADDLLDCE----------EDLP 235
            + L  F E+LGI FQ+ DD+LD            EDLP
Sbjct: 190 TQILANFAEDLGIAFQIIDDILDYRGSSQLNKPMLEDLP 228


>gi|212704854|ref|ZP_03312982.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098]
 gi|212671696|gb|EEB32179.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098]
          Length = 321

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   +      +   +E +H  +L+HDD+  +DN   RRGKP  H
Sbjct: 41  GGKRLRPLLTILMARLLGYDKKDIYDLAVTMEMLHAATLLHDDV--LDNADTRRGKPAAH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             ++  + I+AG+ +L +A  +++    Q  D       L L  +        G++L+I 
Sbjct: 99  TIFNATSTILAGDAMLAHANALVA----QCGDP-----RLCLCFSEATSRTAAGEILEIA 149

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            +   ET     +++   KT  L+  +C+ GA+ A A +   E    +GEN+G+ FQ+ D
Sbjct: 150 AQHQVETTAEEYEEIIRGKTAWLIRASCQLGALRAGADEALVEAAAAYGENIGMAFQIVD 209

Query: 226 DLLD 229
           D LD
Sbjct: 210 DALD 213


>gi|282879099|ref|ZP_06287859.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
 gi|281298833|gb|EFA91242.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
          Length = 325

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L+   A  FN     A      +E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKRMRPMLILLIAKNFNGVTSIAQHAAVGLELLHTASLVHDDV--VDESGERRGQASVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            YD   A++ G+ +L+ A   +S           S+ ++    N+G + +  G++L   +
Sbjct: 103 TYDNKVAVLVGDYILSTALLQVSFT--------HSEAIIQNLANLG-RTLSNGEILQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           IQ++ I E   + + K KT AL       GA    A+  E E  R FG+ LGIIFQ+ DD
Sbjct: 154 IQNQDISEEVYYQVIKQKTAALFESCAVIGAQAGKATPEEVEAAREFGQTLGIIFQIRDD 213

Query: 227 LLDCEE 232
           + D  E
Sbjct: 214 IFDYFE 219


>gi|238855305|ref|ZP_04645623.1| polyprenyl synthetase [Lactobacillus jensenii 269-3]
 gi|260664293|ref|ZP_05865146.1| heptaprenyl diphosphate synthase component II [Lactobacillus
           jensenii SJ-7A-US]
 gi|282933031|ref|ZP_06338422.1| polyprenyl synthetase [Lactobacillus jensenii 208-1]
 gi|238832075|gb|EEQ24394.1| polyprenyl synthetase [Lactobacillus jensenii 269-3]
 gi|260562179|gb|EEX28148.1| heptaprenyl diphosphate synthase component II [Lactobacillus
           jensenii SJ-7A-US]
 gi|281302840|gb|EFA95051.1| polyprenyl synthetase [Lactobacillus jensenii 208-1]
          Length = 325

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 25/219 (11%)

Query: 32  QTQH--NDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           QT H  N  L SA++  A  GGK +R  LV   A      +   +++  AIE +H  +LI
Sbjct: 26  QTMHAPNKNLESALKEMADNGGKYLRPSLVLLAAHAVGKTNKQIIQIATAIETLHMATLI 85

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D+   RRGKP++   + +  A+ AG+ L T  F+++          + +Q M 
Sbjct: 86  HDDV--IDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNEPEYLRLNAQTMR 143

Query: 149 SLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            +     L G LG   Q  +++  F D        K KT  L   A E GA  A  +  +
Sbjct: 144 QI-----LNGELGQMNQRFNLEQTFDDYLADI---KGKTATLFRLAAEEGAHFAGGNLEQ 195

Query: 207 KERLRCFGENLGIIFQLADDLLDCE----------EDLP 235
            + L  F E+LGI FQ+ DD+LD            EDLP
Sbjct: 196 TQILANFAEDLGIAFQIIDDILDYRGSSQLNKPMLEDLP 234


>gi|113460390|ref|YP_718452.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT]
 gi|112822433|gb|ABI24522.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT]
          Length = 326

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      +   A +E IH  +L+HDD+  +D   +RRG PT +
Sbjct: 46  GGKRIRPMIALLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF+++    T+L +++R   ++S   NI  +G +  Q++++ 
Sbjct: 104 AEFGNAASVLVGDFIYTRAFQLM----TKL-NSLRILQIMSDATNIIAEGEVQ-QLMNVN 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI A ++  ++  L+ +G  LG  FQL DD+L
Sbjct: 158 DPETSEDNYMKVIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVL 217

Query: 229 D 229
           D
Sbjct: 218 D 218


>gi|254456546|ref|ZP_05069975.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083548|gb|EDZ60974.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 337

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 17/192 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R+ L    A L   +  +  + + A +E IH  +L+HDD+  +D G IRRGK T+
Sbjct: 55  GGKRLRALLTLGSAKLCGYSKGSRDVNLAACVELIHGATLMHDDV--IDEGIIRRGKETL 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +   ++++ G+ LL+  FE++         N+    +LS T +   QG    ++L +
Sbjct: 113 NEIWGNHSSVLIGDYLLSRCFEMMVED-----GNLEVLKLLSSTSSKIAQG----EVLQL 163

Query: 168 QD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           Q     + ++ET + +I   KT  L   + + GAI++     EK+ L  +G NLG+ FQ+
Sbjct: 164 QHKGEVDMLEETYLKIIS-AKTAELFAASTKVGAILSDVDNKEKDALEFYGRNLGLTFQI 222

Query: 224 ADDLLDCEEDLP 235
           ADD LD   +L 
Sbjct: 223 ADDTLDYNSELK 234


>gi|170717395|ref|YP_001783470.1| polyprenyl synthetase [Haemophilus somnus 2336]
 gi|168825524|gb|ACA30895.1| Polyprenyl synthetase [Haemophilus somnus 2336]
          Length = 330

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      +   A +E IH  +L+HDD+  +D   +RRG PT +
Sbjct: 50  GGKRIRPMIALLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF+++    T+L +++R   ++S   NI  +G +  Q++++ 
Sbjct: 108 AEFGNAASVLVGDFIYTRAFQLM----TKL-NSLRILQIMSDATNIIAEGEVQ-QLMNVN 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI A ++  ++  L+ +G  LG  FQL DD+L
Sbjct: 162 DPETSEDNYMKVIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVL 221

Query: 229 D 229
           D
Sbjct: 222 D 222


>gi|163858994|ref|YP_001633292.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM
           12804]
 gi|163262722|emb|CAP45025.1| putative octaprenyl-diphosphate synthase [Bordetella petrii]
          Length = 308

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRMRPAMVLMMARALGYQGEHHRLLAAVVEFIHTATLLHDDV--VDESDLRRGRETAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     +R   +LS    I  +G +  Q+L++ 
Sbjct: 88  AMFGNAASVLVGDYLYSRSFEMMVEAGS-----MRIMQILSEATTIIAEGEVL-QLLNVH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + + +   + + KT  L   A + GA++A AS  ++E    +G ++G  FQL DD+L
Sbjct: 142 DPDVSQARYLQVVRYKTAKLFEAAAQVGAVLAGASPEQEEAAAAYGRHIGTAFQLVDDVL 201

Query: 229 DCEED 233
           D   D
Sbjct: 202 DYSGD 206


>gi|218290932|ref|ZP_03494989.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239097|gb|EED06300.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 321

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR      C            +V AA+E IH  +L+HDD+  +D   +RRG+PTV 
Sbjct: 43  GGKRIRPLFALICGLGEREWSEDVAKVAAALEMIHMATLVHDDV--IDRADLRRGRPTVR 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y  + A+  G+ L   A ++++       DN+    +++     G+  +  G++  IQ
Sbjct: 101 KSYGNLAAMYTGDYLFARAIQLLAEV-----DNLEVHRLMAR----GIVLLCEGEIEQIQ 151

Query: 169 DEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           D F + +Q  M        KT  L+  +C+ GA++  A + E   L  FG  +G+ FQ+ 
Sbjct: 152 D-FYNWSQGVMTYLRRIHRKTALLISLSCQLGAMVGGAHKREVAALARFGHAVGMAFQIV 210

Query: 225 DDLLD 229
           DDLLD
Sbjct: 211 DDLLD 215


>gi|58696807|ref|ZP_00372336.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225630516|ref|YP_002727307.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi]
 gi|58536990|gb|EAL60142.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592497|gb|ACN95516.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi]
          Length = 325

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIR  LV     + N +    + V A++E IH  +L+HDD+  +D    R G  T +
Sbjct: 47  GGKKIRPKLVFIICKMLNYSGENRINVAASVEFIHNATLLHDDV--LDESEARHGVKTAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   ++I+ G+ LLT AF  +         N+    +LS   ++ ++G +  QM    
Sbjct: 105 KIWGNKSSILVGDLLLTLAFRWLIEC-----GNLNILSILSKASHLLVKGEIK-QMTARF 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D        F I   KT +L    CE+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+L
Sbjct: 159 DPHTVRENYFDIIGEKTASLFSACCEAASTVSGATNDETERLKNFGFNFGMAFQIVDDML 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|294496102|ref|YP_003542595.1| polyprenyl synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667101|gb|ADE36950.1| Polyprenyl synthetase [Methanohalophilus mahii DSM 5219]
          Length = 292

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKK R  ++   + +       AL    AIE IH  SLIHDDL  +D G +RRG  T H
Sbjct: 40  GGKKTRPVILLLSSRICGSEIENALDAALAIELIHSASLIHDDL--LDRGVLRRGVKTAH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             Y    A++AG+ L++ + E+ISS   ++        M           M  G+ +D+ 
Sbjct: 98  EVYGTAAAMLAGDYLISKSIELISSYGKEIGTEFGRAGM----------EMAEGEAMDVD 147

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +    +  + F   + KT +L   +   GA +A A ++   + R FG  LG  +Q+ D
Sbjct: 148 LLEKNINNRVEYFNCIEKKTASLFAASAVMGAYVAGADEDTVSKFRLFGNKLGTAYQIVD 207

Query: 226 DLLD 229
           D+L+
Sbjct: 208 DMLE 211


>gi|289550751|ref|YP_003471655.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           lugdunensis HKU09-01]
 gi|289180283|gb|ADC87528.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           lugdunensis HKU09-01]
          Length = 318

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 19/201 (9%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91
           ND +L      LL  GGK++R   V   +S F  +  +    +V  A+E IH  +L+HDD
Sbjct: 24  NDTVLEEASLHLLSSGGKRVRPAFVI-LSSQFGKSKQSEDTYKVAVALELIHMATLVHDD 82

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RRG+ T+  ++D+ TAI+ GN LL    E +S       ++ R   ++S +
Sbjct: 83  V--IDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLEQLSEV-----NHPRIHTIISTS 135

Query: 152 HNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKE 208
               +  +  G++   QD+F  ++T    ++++  KT  L+  A E GA+ ++ASQ    
Sbjct: 136 ----IVDVCRGELFQFQDQFNSNQTISNYLRRINRKTALLIQLATEVGALTSNASQQTVY 191

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           +L+  G  +G+ FQ+ DD+LD
Sbjct: 192 KLKMIGHYIGMSFQIIDDILD 212


>gi|300727537|ref|ZP_07060928.1| polyprenyl synthetase [Prevotella bryantii B14]
 gi|299775240|gb|EFI71841.1| polyprenyl synthetase [Prevotella bryantii B14]
          Length = 325

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 10/197 (5%)

Query: 35  HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H D LLS +        GK++R  L+   A  F      +L     +E +H  SL+HDD+
Sbjct: 28  HTDGLLSQVLDHIKQRAGKRMRPMLILLMAKNFGKVSDVSLNAAVGLELLHTASLVHDDV 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG+ +V+  Y+   A++ G+ LL+ A   +S   +++     S+L  +L++
Sbjct: 88  --VDESDERRGQASVNASYNNKVAVLVGDYLLSTALLYVSYTHSEVIVRYLSELGRTLSN 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              LQ      + +IQ+  I E   + +  MKT AL       GA  A AS  +    R 
Sbjct: 146 GEILQ------LSNIQNRTISEDAYYDVISMKTAALFEACAVIGAESAGASHEDTMAARE 199

Query: 213 FGENLGIIFQLADDLLD 229
           FG+ LG+IFQ+ DD+ D
Sbjct: 200 FGKKLGLIFQIRDDIFD 216


>gi|225024258|ref|ZP_03713450.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC
           23834]
 gi|224943283|gb|EEG24492.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC
           23834]
          Length = 339

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 103/194 (53%), Gaps = 12/194 (6%)

Query: 39  LLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L+S I RY +  GGK++R  L      +   +      + A +E IH  +L+HDD+  +D
Sbjct: 48  LISQIGRYIISAGGKRLRPVLTILSGKVLGYDEDPLYALAAMVEFIHTSTLLHDDV--VD 105

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIG 155
              +RRG+ T +  +    A++ G+ L T AF++ +SS   ++ D     +M   T+ I 
Sbjct: 106 ESELRRGRKTANNMFGNAAAVLVGDFLYTRAFQLMVSSGSLKILD-----VMADATNIIA 160

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
              +L  Q+++I +  I E +   + + KT  L   A + GAI+A A+  ++  L+ +G 
Sbjct: 161 EGEVL--QLMNIGNTNITEAEYVQVIQYKTAKLFEAAAQVGAILAGATPEQENALKDYGR 218

Query: 216 NLGIIFQLADDLLD 229
           ++G  FQ+ DD+LD
Sbjct: 219 HIGTAFQIIDDVLD 232


>gi|39934591|ref|NP_946867.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009]
 gi|39648440|emb|CAE26961.1| geranylgeranyl pyrophosphate synthase [Rhodopseudomonas palustris
           CGA009]
          Length = 288

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RL +A+R A+   G ++R  L    A +    N       GAA+E +HC SLIHDDLP  
Sbjct: 26  RLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGITEAAGAALELMHCASLIHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRG+P+VH  + E  A++AG+ ++  AF+ I+  + Q      +  +L LT  IG
Sbjct: 86  DGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIARAEGQ------ADRLLKLTQIIG 139

Query: 156 LQ-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G++ GQ  + + E      +    + KTGAL   A       A ++ ++ E  
Sbjct: 140 GAVGVPFGIVAGQAWECETEI----NLAHYHRSKTGALFVAATAM---GAASAGSDPEPW 192

Query: 211 RCFGENLGIIFQL 223
           R  GE +G  +Q+
Sbjct: 193 RMVGEKIGEAYQV 205


>gi|33599305|ref|NP_886865.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50]
 gi|33575351|emb|CAE30814.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50]
          Length = 321

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 113/229 (49%), Gaps = 15/229 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + ++ K +D ++ D L      ++T   D ++ A      GGK++R  +V   A  
Sbjct: 6   LIAPIADDMKAVDAVIRDRLNSDVVLIRTI-GDYIIGA------GGKRMRPAMVLMVARA 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 59  LGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLVGDYLY 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + +FE++        D++R   +LS    +  +G +  Q+L++ D  + + +   + + K
Sbjct: 117 SRSFEMMVE-----ADSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQVVRYK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   A + GA++A AS  ++     +G ++G  FQL DD+LD   D
Sbjct: 171 TAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGAAFQLVDDVLDYSGD 219


>gi|329935839|ref|ZP_08285642.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304682|gb|EGG48557.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
          Length = 341

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 92/207 (44%), Gaps = 25/207 (12%)

Query: 36  NDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            DR+    RYALL  GK +R  L+   A     +    +    A+E +H  SLIHDD+  
Sbjct: 36  GDRMHEIARYALLAPGKLLRPLLLVASAEATGGSRSEVVPAALAVEYLHVASLIHDDV-- 93

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------PKTQLKDNIR----- 143
           +D   +RRG+ +VH  Y    AI  G+ LL   F  ++       P T +   IR     
Sbjct: 94  IDGDDLRRGQSSVHALYGVPDAIATGDALLFRVFSAVAECVALGVPDTAVLAAIRVLAEA 153

Query: 144 -SQLMLSLTHNIGLQGML-GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
              L         L     G   LD   E         +  +KTGAL+  AC +GA+++ 
Sbjct: 154 GGDLCRGQVQEAELAAAWPGAGGLDAYRE---------MASLKTGALLRAACRAGALLSG 204

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLL 228
            S  E E +  F  +LG+ FQ+ DDLL
Sbjct: 205 GSPEETEAVTVFAGHLGLAFQMYDDLL 231


>gi|254444809|ref|ZP_05058285.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
 gi|198259117|gb|EDY83425.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
          Length = 305

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 3/194 (1%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A  +AL   G   R+ +      + +++   A  +GA+IE  H  SLI DDLP MD+
Sbjct: 30  LFEAASHALEAEGSFSRANIAIGAGEILDMDTSRAEAIGASIELFHLASLILDDLPCMDD 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RR K   H  Y E  AI+A  G +  A+ ++    +++    + +    +   +G  
Sbjct: 90  ASMRRSKECAHSVYGEGAAILAALGFINRAYSLLWDLFSEVGKEQQLEAADLVNDCLGFS 149

Query: 158 GMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           G+L GQ  DI  +D      +V  I   KTG+L+       AI++ AS+ +K  L    +
Sbjct: 150 GILDGQSRDIHFEDSAGLGAEVRQIASQKTGSLIRLCLLLPAILSSASRYDKMHLTRLAQ 209

Query: 216 NLGIIFQLADDLLD 229
             GI +Q+ADDL D
Sbjct: 210 YWGIAYQVADDLKD 223


>gi|329297304|ref|ZP_08254640.1| polyprenyl synthetase [Plautia stali symbiont]
          Length = 323

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR  +    A   N      +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKHIRPMIAVLSARALNYQGSLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S       +++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTS-----MGSLKILALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|42520637|ref|NP_966552.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42410376|gb|AAS14486.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 328

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIR  LV     + N +    + V A++E IH  +L+HDD+  +D    R G  T +
Sbjct: 50  GGKKIRPKLVFIICKMLNYSGENRINVAASVEFIHNATLLHDDV--LDESEARHGVKTAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   ++I+ G+ LLT AF  +         N+    +LS   ++ ++G +  QM    
Sbjct: 108 KIWGNKSSILVGDLLLTLAFRWLIECG-----NLNILSILSKASHLLVKGEIK-QMTARF 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D        F I   KT +L    CE+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+L
Sbjct: 162 DPHTVRENYFDIIGEKTASLFSACCEAASTVSGATNDETERLKNFGFNFGMAFQIVDDML 221

Query: 229 D 229
           D
Sbjct: 222 D 222


>gi|71906297|ref|YP_283884.1| polyprenyl synthetase [Dechloromonas aromatica RCB]
 gi|71845918|gb|AAZ45414.1| Polyprenyl synthetase [Dechloromonas aromatica RCB]
          Length = 341

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +        + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 62  GGKRMRPALVLLAAGALDYQGTRHQEMAAVVEFIHTATLLHDDV--VDESALRRGRDTAN 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ +      DN+R   +LS   N+  +G +  Q+++  
Sbjct: 120 AMFGNAASVLVGDFLYSRAFQMMVA-----VDNMRVMQVLSDATNVIAEGEVL-QLMNCH 173

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   +   KT  L   A + GAI+  A+   ++ L  +G +LG  FQL DD+L
Sbjct: 174 DADVDEARYMQVIHYKTAKLFEAAAQLGAILGQATPEVEKALTAYGMHLGTAFQLIDDVL 233

Query: 229 D 229
           D
Sbjct: 234 D 234


>gi|323465974|gb|ADX69661.1| Trans-hexaprenyltranstransferase [Lactobacillus helveticus H10]
          Length = 326

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 11/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +QT H     + +  A  G K +R  L+   A +    +   + + ++IE +H  +LIHD
Sbjct: 28  IQTPHQSLQAALLTMADNGDKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHD 87

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D  ++D+  +RRG  ++  ++ +  A+ AG+ L T  F+++    T+ +  +R+   +S 
Sbjct: 88  D--TIDDSDLRRGNISIQAEFGKDVAVYAGDLLFTNFFDLMLDTTTEHEYLVRNAQTMSH 145

Query: 151 THNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                L G LG   +  +++  F D        K KT AL   A E GA  A  +  +  
Sbjct: 146 I----LNGELGQMAERFNLEQTFTDYLNDI---KGKTAALFRLAAEEGAHFAGGNAEQST 198

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L  FGENLGI FQ+ DDLLD
Sbjct: 199 ALANFGENLGIAFQIVDDLLD 219


>gi|110833312|ref|YP_692171.1| transferase [Alcanivorax borkumensis SK2]
 gi|110646423|emb|CAL15899.1| transferases [Alcanivorax borkumensis SK2]
          Length = 307

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 9/186 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +   CA          + V A IE +H  +L+HDD+  +D   +RRG+PTV+
Sbjct: 27  GGKRLRPLIAVLCARASGYQGSRHVDVAAIIEFLHTATLLHDDV--VDESNLRRGRPTVN 84

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L++ A +++ + +     +I SQ   +++    L      Q+++++
Sbjct: 85  AVWGNAASVLVGDFLISRALQLMVALRHPRLLDIFSQSTNTISEGEVL------QLINVR 138

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDL 227
           D    E     +   KT  +   A E+GA++ A+   +  +    +G +LGI FQL DD+
Sbjct: 139 DPNTSEDNYMRVIHHKTAKMFESAAETGAVLGANDVSDHVDAFATYGRHLGIAFQLIDDV 198

Query: 228 LDCEED 233
           LD + D
Sbjct: 199 LDYQGD 204


>gi|119944297|ref|YP_941977.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37]
 gi|119862901|gb|ABM02378.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37]
          Length = 331

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A    ++     ++ A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 51  GGKRIRPLITVLAAKALGIHDQNTTKLAAIIEFIHTATLLHDDV--VDDSDLRRGKKTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    TQL+ N++   +LS   NI  +G +  Q+++  
Sbjct: 109 AVFGSAASVLVGDFLYTRSFQMM----TQLR-NLKVMDILSSATNIIAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   I   KT  L   A +  A++   S+  +  L  +G+ LG  FQL DD++
Sbjct: 163 DPDTTEKKYMDIIYFKTAKLFEAATQLVAVLGEQSEEIETALLNYGKYLGTAFQLTDDVM 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYNSD 227


>gi|66043965|ref|YP_233806.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
           B728a]
 gi|289674837|ref|ZP_06495727.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
           FF5]
 gi|63254672|gb|AAY35768.1| Trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
           B728a]
 gi|330941237|gb|EGH44102.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330954228|gb|EGH54488.1| trans-hexaprenyltranstransferase [Pseudomonas syringae Cit 7]
 gi|330977523|gb|EGH77469.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 322

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMKILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A + +A Q + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|33595027|ref|NP_882670.1| octaprenyl-diphosphate synthase [Bordetella parapertussis 12822]
 gi|33565103|emb|CAE40054.1| octaprenyl-diphosphate synthase [Bordetella parapertussis]
          Length = 321

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPAMVLMVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++        D++R   +LS    +  +G +  Q+L++ 
Sbjct: 101 AVFGNAASVLVGDYLYSRSFEMMVE-----ADSMRIMQILSQATTVIAEGEVL-QLLNVH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + + +   + + KT  L   A + GA++A AS  ++     +G  +G  FQL DD+L
Sbjct: 155 DPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRRVGTAFQLVDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSGD 219


>gi|269977600|ref|ZP_06184567.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus
           mulieris 28-1]
 gi|269934203|gb|EEZ90770.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus
           mulieris 28-1]
          Length = 339

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 31/236 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  KL E   R++  L +   +TA+   T+    ++S +R A  GGK++R  LV   + 
Sbjct: 10  ALEKKLTEALSRVEARLVEET-RTAAENTTE----IVSHLRAA--GGKRMRPLLVLLISQ 62

Query: 64  LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           L N      +       G A+E  H  SL HDDL  MD+  +RRG    H++++   A++
Sbjct: 63  LGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAVM 120

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFID 173
           AG+ +   A  I+S    +L             H    Q +  GQM DI      D+ ID
Sbjct: 121 AGDLIFARASLIVSDFGRELMKY----------HARTFQRLCLGQMHDILGPGATDDPID 170

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                 + + KTG+L+  A   GA ++  S      +  FGE+LG+ FQ+ADD+LD
Sbjct: 171 --FYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLD 224


>gi|227874599|ref|ZP_03992762.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
           35243]
 gi|227844808|gb|EEJ54954.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
           35243]
          Length = 339

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 31/236 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  KL E   R++  L +   +TA+   T+    ++S +R A  GGK++R  LV   + 
Sbjct: 10  ALEEKLTEALSRVEARLVEET-RTAAENTTE----IVSHLRAA--GGKRMRPLLVLLISQ 62

Query: 64  LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           L N      +       G A+E  H  SL HDDL  MD+  +RRG    H++++   A++
Sbjct: 63  LGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAVM 120

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFID 173
           AG+ +   A  I+S    +L             H    Q +  GQM DI      D+ ID
Sbjct: 121 AGDLIFARASLIVSDFGRELMKY----------HARTFQRLCLGQMHDILGPGATDDPID 170

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                 + + KTG+L+  A   GA ++  S      +  FGE+LG+ FQ+ADD+LD
Sbjct: 171 --FYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLD 224


>gi|239827501|ref|YP_002950125.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           WCH70]
 gi|239807794|gb|ACS24859.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           WCH70]
          Length = 320

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A     +      V  A+E IH  SL+HDD+  +D+  +RRG+ T+ 
Sbjct: 43  GGKRIRPVFVLLAAKFGTYDIERIKHVAVALELIHMASLVHDDV--IDDAELRRGRKTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +++   A+  G+ +   + E ++  +  L   I +  ++ +           G++  I+
Sbjct: 101 AKWNNRFAMYTGDYMFARSLEQMARLENPLAHRILANTIVEVCR---------GEIEQIK 151

Query: 169 DEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  D+     ++  K KT  L+  +C+ GAI A+A+++  ERL  FG  +G+ FQ+ D
Sbjct: 152 DKYRFDQNLRCYLRRIKRKTALLIAASCQLGAIAANAAKDVAERLYLFGYYVGMSFQITD 211

Query: 226 DLLD 229
           D+LD
Sbjct: 212 DILD 215


>gi|270307760|ref|YP_003329818.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
           VS]
 gi|270153652|gb|ACZ61490.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
           VS]
          Length = 324

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 14/208 (6%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
            +  S  + Q    +   + Y L+GGK +R  L    A  F       L +  + E +H 
Sbjct: 22  FKLVSERRKQSFPEMAEMLDYILVGGKVLRPALSMLSAMCFGAGIKKVLSLATSSEMLHI 81

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD  ++D    RRG+ TV+  +    AI+ G+ L  +A E  +        N+R 
Sbjct: 82  ATLVHDD--AIDKADTRRGRRTVNSVWGLEKAILLGDFLFAHAAETAAD-----TGNMRI 134

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAH 201
             + + T    LQ +  G++      F  D++    ++++  KT AL   A + GAI+A 
Sbjct: 135 VTLFAQT----LQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILAD 190

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           AS  ++E +R +G NLG+ FQ+ DD+LD
Sbjct: 191 ASPADEEIMRSYGYNLGLSFQIVDDILD 218


>gi|254435950|ref|ZP_05049457.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
 gi|207089061|gb|EDZ66333.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
          Length = 322

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 14/226 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73
           D + DD+    A   Q  H+D  L++ + + ++  GGK++R  +V   A  F       +
Sbjct: 8   DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A IE IH  +L+HDD+  +D+  +RRG+ T +  +    +++ G+ L + AFE++  
Sbjct: 68  DIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 125

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D++R   +L+ T N   +G +  Q+L+  +    E     I + KT  L   A 
Sbjct: 126 V-----DSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 179

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + GA++ H    E++ +  +G +LG  FQL DD+LD     EDL K
Sbjct: 180 QLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 225


>gi|194016766|ref|ZP_03055379.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
           ATCC 7061]
 gi|194011372|gb|EDW20941.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
           ATCC 7061]
          Length = 320

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V  A+E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 43  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVALELIHMASLVHDDV--IDDAELRRGKPT 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +   + E ++     +   I S++++ L           G++  
Sbjct: 99  IKAKWDNRIAMYTGDYMFARSLEYMTKINHPMAHEILSKMVVELCL---------GEIEQ 149

Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           ++D++ +D+     ++  K KT  L+  +C+ GAI A   +   + L  FG  +G+ +Q+
Sbjct: 150 VKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQI 209

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 210 IDDVLDFTSTEEELGK 225


>gi|217970068|ref|YP_002355302.1| trans-hexaprenyltranstransferase [Thauera sp. MZ1T]
 gi|217507395|gb|ACK54406.1| Trans-hexaprenyltranstransferase [Thauera sp. MZ1T]
          Length = 322

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +   +    + A +E IH  SL+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPALVLYAAGALDYRGVHHHELAAVVEFIHTASLLHDDV--VDESDLRRGKRTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   +A++ G+ L + AF+++        D +R   +L+   NI  +G +  Q+L+  
Sbjct: 101 AAFGNASAVLVGDFLYSRAFQMMVGV-----DEMRVMRVLADATNIIAEGEVL-QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +       + + KT  L   A   G I+A A    ++RL  FG +LG  FQL DD+L
Sbjct: 155 NADVVIEDYLRVIRYKTAKLFEAAARLGGIVAGADDALEQRLAAFGMHLGTAFQLIDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|295837107|ref|ZP_06824040.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74]
 gi|197697218|gb|EDY44151.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74]
          Length = 336

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  +
Sbjct: 51  LAGGKRFRPLLVMLAAQFGDPEAPGVVPSAVVVELTHLATLYHDDV--MDEATVRRGVES 108

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML- 165
            + ++D   A++ G+ L + A +I++    +    +R Q           + ++ GQ+L 
Sbjct: 109 ANARWDNSVAVLTGDFLFSRASQILAGLGPE---AVRIQAE-------AFERLVTGQILE 158

Query: 166 --------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                   D  D ++D      +   KTG+L+  A   GA+M+ A     E L  +GE L
Sbjct: 159 TAGPQDGRDPVDHYLD------VLSGKTGSLVAVATRYGAMMSGAGSEAVEILTQYGERL 212

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQLADD+LD   D
Sbjct: 213 GVAFQLADDVLDIASD 228


>gi|189460221|ref|ZP_03009006.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136]
 gi|189433082|gb|EDV02067.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136]
          Length = 324

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 30/191 (15%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+   + + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLMAKLYGGINDSTLHAALSLELLHTASLVHDDV--VDESNKRRGQSSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------- 162
            YD   +++ G+ +L           T L+         S T++I L G++         
Sbjct: 103 LYDNKVSVLVGDYMLA----------TSLRH-------ASYTNHIELVGLVARLGQDLSE 145

Query: 163 ----QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
               Q+++I +    E   F + + KT AL   + ESGAI  +A ++E E+   FGE +G
Sbjct: 146 GEIIQLVNISNRDFSEEIYFDVIRKKTAALFTASAESGAISVNAPKDEVEKAVLFGEMIG 205

Query: 219 IIFQLADDLLD 229
           I FQ+ DD+ D
Sbjct: 206 IAFQIKDDIFD 216


>gi|88607042|ref|YP_505772.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ]
 gi|88598105|gb|ABD43575.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ]
          Length = 316

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 8/183 (4%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+ R  ++     +        + V AAIE +H  +L+HDD+  +D   +RRG  T
Sbjct: 36  LSGGKRTRPVMLLAACGMLGCTDARRIVVAAAIEFLHSATLLHDDV--VDKSDMRRGVET 93

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +    +I+ G+ L   AF+ I S      ++I+   +LS T +I + G +  Q++ 
Sbjct: 94  ANSIWGNKASILVGDFLFATAFQWIVSC-----NSIQLLSVLSNTASIIVSGEMQ-QLVH 147

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                I  T+   I   KT  L   ACES A++      ++  LR +G N GI+FQ+ DD
Sbjct: 148 SSSLDISRTKYLEIISSKTAVLFSAACESAAVLHDVGTLQRNALRDWGFNFGIVFQILDD 207

Query: 227 LLD 229
           +LD
Sbjct: 208 ILD 210


>gi|299137617|ref|ZP_07030798.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298600258|gb|EFI56415.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 334

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 20/189 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  ++   A          +R+GA +E +H  +L+HDD+  +D    RRG+P+ +
Sbjct: 49  GGKRIRPMMLLLSARAVGCESEARIRLGAVVEMLHTATLVHDDI--IDEASTRRGRPSSN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDI 167
             +     ++AG+ L   +F+   + +     N R   L++SLT     Q M+ G++L +
Sbjct: 107 TTWGNAKCVLAGDWLYMQSFQTALAER-----NFRILDLLISLT-----QQMVEGELLQM 156

Query: 168 QD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-----KERLRCFGENLGII 220
           +     I+E + F +   KT  L   + + GA++A           +E L  +G NLG+ 
Sbjct: 157 EKLGHLINEEEYFDLIYRKTACLFKVSMQLGAVIAVPPTTPNAAPFEEALGEYGRNLGLA 216

Query: 221 FQLADDLLD 229
           FQ+ DD+LD
Sbjct: 217 FQIVDDVLD 225


>gi|302188811|ref|ZP_07265484.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. syringae
           642]
          Length = 322

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMDVMKILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A + +AS+ + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNASEAQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|284047359|ref|YP_003397699.1| trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684]
 gi|283951580|gb|ADB54324.1| Trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684]
          Length = 323

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 104/220 (47%), Gaps = 24/220 (10%)

Query: 14  KRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +R++  L +L   TA H Q   +H    ++A      GGK++R  LV   A         
Sbjct: 23  ERVEQRLTEL---TAGHGQLLAEHAGTTIAA------GGKRLRPLLVLLAAGESAAPTDR 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EI 130
            +R   A+E IH  SL+HDD+  +D   +RRG+PTV        A   G+ L + AF E+
Sbjct: 74  LIRSAVAVELIHSASLVHDDV--LDRAPVRRGRPTVFAAAGRTVATATGDLLFSRAFAEL 131

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
            +S +     ++R+   LS   +    G L  Q  D  D  +   +     ++KTGAL  
Sbjct: 132 AASGEAA---DVRA---LSGASSALAAGELM-QRADAWDVGVSLDRYLERCELKTGALFE 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AC  GA+   A+    E L  FG  +G+ FQL DD+LD 
Sbjct: 185 AACRLGAL---ATAGPDEALAAFGRRIGLAFQLLDDVLDV 221


>gi|256830774|ref|YP_003159502.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579950|gb|ACU91086.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 326

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +        + +++E +H  +L+HDD+  +DN  +RRGK   H
Sbjct: 45  GGKRLRPMLTLLFARALSFRGDNLQTLASSLEFLHSATLMHDDI--LDNSELRRGKRAAH 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +     ++AG+ LL  A EI++ +    L   I   +M + T  I        ++  I
Sbjct: 103 TLFGITPTVLAGDVLLALANEIVARTNNPALTSCISKAIMQTATGEIM-------EIAAI 155

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +   I   +   I   KT  L+  ACE G I A  S+  +   + FG NLGI FQL DD 
Sbjct: 156 RKAHITRAEYIEIITGKTAYLIQSACEFGVIAAEGSERARAGAKTFGLNLGIAFQLVDDA 215

Query: 228 LD 229
           LD
Sbjct: 216 LD 217


>gi|330813965|ref|YP_004358204.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327487060|gb|AEA81465.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 338

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    + LF       +++ A +E IH  +L+HDD+  +D    RRGK T +
Sbjct: 57  GGKRLRPLLTIASSELFGYQGDRHIKLAACVELIHNATLLHDDV--IDKSDFRRGKKTNN 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +I+ G+ LL   FEI+      ++D   S  +L L  ++  + +  G++L +Q
Sbjct: 115 NLWGNKNSILTGDYLLGRCFEIM------VEDG--SLEVLKLLSSVSSE-IAQGEILQLQ 165

Query: 169 DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   ET       I   KT +L   +   G  +   S+NEKE L  FG NLGI FQ+ D
Sbjct: 166 HEKEVETLEKTYLEIIGSKTSSLFAASMRVGGCINDKSKNEKEALTSFGFNLGICFQITD 225

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 226 DILDYYSD 233


>gi|157692773|ref|YP_001487235.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
           SAFR-032]
 gi|157681531|gb|ABV62675.1| possible heptaprenyl diphosphate synthase component II [Bacillus
           pumilus SAFR-032]
          Length = 320

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V  A+E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 43  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVALELIHMASLVHDDV--IDDAELRRGKPT 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +   + E ++     +   I S++++ L           G++  
Sbjct: 99  IKAKWDNRIAMYTGDYMFARSLEYMTKINHPMAHEILSKMVVELCL---------GEIEQ 149

Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           ++D++ +D+     ++  K KT  L+  +C+ GAI A   +   + L  FG  +G+ +Q+
Sbjct: 150 VKDKYNMDQNLRTYLRRIKRKTALLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQI 209

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 210 IDDVLDFTSTEEELGK 225


>gi|209886074|ref|YP_002289931.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5]
 gi|209874270|gb|ACI94066.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5]
          Length = 336

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAQLAGYVGDGHIKLAAAVEFMHTATLLHDDV--VDESELRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G ++A   + E+   R  G NLGI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVIAERPKAEQTACRAVGMNLGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|146281341|ref|YP_001171494.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
 gi|145569546|gb|ABP78652.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
 gi|327479520|gb|AEA82830.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166]
          Length = 322

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV    S           + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLSGSALGHQGEQLRLLAAIIEFLHTSTLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L   +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 ALWGNAPSVLVGDFLYARSFEMMVELDSMPVMRIISQATRVIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A AS+ ++E LR FG++LGI FQL DDLL
Sbjct: 155 DASTTEEIYMEVIRGKTAMLFEASTHSAATLAGASEQQREALRTFGDHLGIAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYQGD 219


>gi|74100796|gb|AAZ99642.1| isoprenyl diphosphate synthase [Streptomyces sp. Tu4128]
          Length = 336

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVASAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
           +++D   A++ G+ L   A +I++    +    +R Q        +  + ++ GQ+L   
Sbjct: 111 VRWDNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +C  GA+M+ A +     L  +GE LG+
Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVHVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|52080783|ref|YP_079574.1| heptaprenyl diphosphate synthase component II [Bacillus
           licheniformis ATCC 14580]
 gi|52786153|ref|YP_091982.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
           licheniformis ATCC 14580]
 gi|319645260|ref|ZP_07999493.1| HepT protein [Bacillus sp. BT1B_CT2]
 gi|52003994|gb|AAU23936.1| heptaprenyl diphosphate synthase component II [Bacillus
           licheniformis ATCC 14580]
 gi|52348655|gb|AAU41289.1| HepT [Bacillus licheniformis ATCC 14580]
 gi|317393069|gb|EFV73863.1| HepT protein [Bacillus sp. BT1B_CT2]
          Length = 320

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 21/217 (9%)

Query: 21  DDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALR-VG 76
           DD+ L      +T H+D  LLS     LL  GGK+IR   V   + +F    ++ ++ V 
Sbjct: 12  DDIELIEKELEKTVHSDYPLLSEASLHLLQAGGKRIRPVFVL-LSGMFGEYDISKIKNVA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            ++E IH  SL+HDD+  +D+  +RRG+PT+  ++D   A+  G+ L   + E ++    
Sbjct: 71  VSLELIHMASLVHDDV--IDDAELRRGQPTIKAKWDNRIAMYTGDYLFARSLEAMTKINE 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFA 192
                I S+ ++ +           G++  I+D++  E    T +  I++ KT  L+  +
Sbjct: 129 PKAHEILSKAIVEVCL---------GEIEQIKDKYNMEQNLRTYLRRIRR-KTALLIASS 178

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           C+ GAI A A +N  + L  FG  +G+ +Q+ DD+LD
Sbjct: 179 CQLGAIAAGAGENIHKTLYWFGYYVGMSYQIIDDILD 215


>gi|299134682|ref|ZP_07027874.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
 gi|298590492|gb|EFI50695.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
          Length = 336

 Score = 81.6 bits (200), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAQLAGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESELRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   A E G ++A+  + E+   R FG NLGI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAASEVGPVIANRPKAEQTASRSFGMNLGIAFQLIDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|71483031|gb|AAZ32465.1| geranylgeranyl pyrophosphate synthase [uncultured euryarchaeote
           Alv-FOS1]
          Length = 352

 Score = 81.6 bits (200), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 34/249 (13%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-----RYALLGGKKIRSFLVT 59
           +P        +  + ++D L +     +T+ N  LL         Y L GGK++R+ L+ 
Sbjct: 1   MPDDWNSFMDKYKSKIEDTLSEFFEKKKTEVNHPLLREAVEIIEEYTLRGGKRVRALLMI 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----- 114
               ++       ++  A +E +  Y LIHDD+  MD   +RRGK TVH  Y+E      
Sbjct: 61  LGYRMYGGKDDEIIKAAATLELVQSYFLIHDDI--MDESDLRRGKKTVHKIYEEEHLHRG 118

Query: 115 -----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
                        IIAG+    YAFEI +  +T+   + + + +  L   +   G   GQ
Sbjct: 119 FPGNPARFGENLGIIAGDLANVYAFEIFA--ETEFDSDRKERALQELERIMEYTGY--GQ 174

Query: 164 MLDIQDEFID---ETQVFMIQKMKTGALMCFACES-GAIMAHASQNEKERLRCFGENLGI 219
           ++D+    +    E  + ++ + KT     +   + GAI+A A   E E LR F   +GI
Sbjct: 175 LIDVYSSMLPEFGEKDLLLLHEYKTANYTIYGPLALGAILAGA---EPESLRDFAIPIGI 231

Query: 220 IFQLADDLL 228
            FQL DD+L
Sbjct: 232 AFQLQDDIL 240


>gi|326692210|ref|ZP_08229215.1| heptaprenyl diphosphate synthase, component II, putative
           [Leuconostoc argentinum KCTC 3773]
          Length = 324

 Score = 81.6 bits (200), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 16/196 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +AIR  L  GK +R  L    + L    +   A+++GA++E +H  +LIHDD+  +D   
Sbjct: 32  TAIRSQLNAGKLVRPALTLIFSKLTTTPYNQQAIQLGASVELLHLATLIHDDI--IDESK 89

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG  ++  ++ + TA+ AG+ LLT  F ++   +T L     +QL L+      LQ +
Sbjct: 90  LRRGYESIQSRFGKDTAVYAGDYLLTGMFSLLE--QTSLPQ--ANQLALT-----ALQDI 140

Query: 160 LGGQMLDIQDEF-IDET-QVFMIQ-KMKTGALMCFACESGAIMAHASQNE-KERLRCFGE 215
           L G+++     F +D T   ++ Q K KT AL   +   G I   A  ++ ++ +   GE
Sbjct: 141 LFGELVQKHHRFNVDATFDTYLSQIKGKTAALFKLSVTFGLISGQAIADDLQDTVSQLGE 200

Query: 216 NLGIIFQLADDLLDCE 231
           NLGI FQL DD LD E
Sbjct: 201 NLGITFQLLDDYLDFE 216


>gi|74100792|gb|AAZ99640.1| isoprenyl diphosphate synthase [Streptomyces mycarofaciens]
          Length = 336

 Score = 81.6 bits (200), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEASVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++    A++ G+ L   A +I++    +    +R Q        +  + ++ GQ+L   
Sbjct: 111 TRWGNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+
Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 358

 Score = 81.6 bits (200), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 16/206 (7%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A+RYALL GGK++R  L      +       A+   AA+E +H  SL+HDDLP MD+
Sbjct: 86  LHEAMRYALLAGGKRVRPALCLAACVVSGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDD 145

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---------PKTQLKDNIRSQLML 148
             +RRGKPT H+ + E  A++AG+ LL  AF+ ++S         P       +R+  + 
Sbjct: 146 DDLRRGKPTCHVMFGEPIAVLAGDALLALAFQHMASVDSYPPDVDPAKHTARVVRA--IG 203

Query: 149 SLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            L   IG +G++ GQ++D++     E +   ++  I   KT AL+  +   GAI+   S+
Sbjct: 204 ELARCIGSEGLVAGQVVDLEMTGSTEPVPLDRLEYIHLHKTAALLEASVVIGAIIGGGSE 263

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
            + ERLR +  ++G++FQ+ DD+LD 
Sbjct: 264 EQIERLRKYARSIGLLFQVVDDILDV 289


>gi|77166478|ref|YP_345003.1| trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707]
 gi|76884792|gb|ABA59473.1| Trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707]
          Length = 345

 Score = 81.6 bits (200), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 14/226 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73
           D + DD+    A   Q  H+D  L++ + + ++  GGK++R  +V   A  F       +
Sbjct: 31  DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 90

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A IE IH  +L+HDD+  +D+  +RRG+ T +  +    +++ G+ L + AFE++  
Sbjct: 91  DIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 148

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D++R   +L+ T N   +G +  Q+L+  +    E     I + KT  L   A 
Sbjct: 149 -----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 202

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + GA++ H    E++ +  +G +LG  FQL DD+LD     EDL K
Sbjct: 203 QLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 248


>gi|310815063|ref|YP_003963027.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
 gi|308753798|gb|ADO41727.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
          Length = 325

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 15/205 (7%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S+MQ+    R+     + +  GGK++R  L    A L   +    + + A +E IH  +L
Sbjct: 24  SYMQSDAAPRIRQVSAHLIDAGGKRLRPMLTVAAARLCGYDGPHHIHLAATVEFIHTATL 83

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D+   RRG+PT ++ +D +++++ G+ L + AF++++         I   + 
Sbjct: 84  LHDDV--VDDSKQRRGRPTANLLWDNMSSVLVGDYLFSRAFQLMT---------ITGSMP 132

Query: 148 LSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +          +  G++L +   +D          I + KT AL   A   GA++A    
Sbjct: 133 ILAALADASATIAEGEVLQLSTARDLSATPETYIRIARGKTAALFSAATRVGAMLAEPGD 192

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
              + +  +G+ LGI FQ+ADDLLD
Sbjct: 193 AIVQAMHDYGDALGIAFQIADDLLD 217


>gi|160871595|ref|ZP_02061727.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella
           grylli]
 gi|159120394|gb|EDP45732.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella
           grylli]
          Length = 322

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A  F        R+ A++E IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLIALLSAKAFGYQGKEHRRLAASLELIHGATLLHDDV--IDGSVLRRGKKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL---THNIGLQGMLGGQML 165
             +    +++ G+ L + AF++IS    Q+ +   S+++ SL   T+ +    +L  Q++
Sbjct: 101 SLWGNSASVLVGDFLYSRAFQLIS----QINN---SRVLTSLADATNTLAQSEVL--QLI 151

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  +  +DE     + + KTG L   A E  A++    + E   +  +G +LGI FQL D
Sbjct: 152 NCYNVDVDEAYCLKVIQGKTGVLFSIAAEQPAMLTERPEAEISAMAHYGMHLGIAFQLID 211

Query: 226 DLLDCEED 233
           D LD   D
Sbjct: 212 DSLDYSGD 219


>gi|148244492|ref|YP_001219186.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326319|dbj|BAF61462.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 323

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+  CA            +   IE IH  +L+HDD+  +D    RRGK TV+
Sbjct: 44  GGKRLRPLLLLLCARATGYQGTHHYLMAVVIELIHTATLLHDDI--VDESSTRRGKDTVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167
             +    +I+ G+ L + AFEI+  P      N+ S + +LS T N   +G +  Q+L+ 
Sbjct: 102 EVWGNAPSILVGDFLYSRAFEIMVEP------NLMSIMCILSKTTNNIAEGEVL-QLLNC 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           Q++ + E + + + K KT  L   A + G +++  ++ ++  L+ +G +LG  FQ+ DD+
Sbjct: 155 QNDELTEVEYYAVIKQKTACLFQAATQIGGLLSAVNKTQETALKNYGLHLGNAFQIIDDV 214

Query: 228 LDCEED 233
           LD E D
Sbjct: 215 LDYESD 220


>gi|239817188|ref|YP_002946098.1| trans-hexaprenyltranstransferase [Variovorax paradoxus S110]
 gi|239803765|gb|ACS20832.1| Trans-hexaprenyltranstransferase [Variovorax paradoxus S110]
          Length = 345

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   +            + A +E IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 66  GGKRLRPALLLLMSGALGYTGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTAN 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        +N+R   +L+   N+  +G +  Q++++ 
Sbjct: 124 ESFGNPASVLVGDFLYSRAFQMMLD-----ANNMRIMQILAEATNVIAEGEVL-QLMNMH 177

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE+    + + KT  L   +    A++A A+   +E    +G+ LG  FQ+ DD+L
Sbjct: 178 DATLDESAYLRVIRSKTAKLFEASTRLAAVLAGATPEVEEACATYGQALGTAFQVIDDVL 237

Query: 229 DCEED 233
           D   D
Sbjct: 238 DYAGD 242


>gi|27377642|ref|NP_769171.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110]
 gi|27350787|dbj|BAC47796.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110]
          Length = 335

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 54  GGKRLRPMLTLAMANLAGYTGDGHIKLAASVEFMHTATLLHDDV--VDESEMRRGKLSAR 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 112 MLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTE 171

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G ++A+  + E+   R  G NLGI FQL DD+L
Sbjct: 172 DEYL------AVIRGKTAELFAAACEVGPVIANRPKAEQTACRSVGMNLGIAFQLVDDVL 225

Query: 229 D 229
           D
Sbjct: 226 D 226


>gi|239928020|ref|ZP_04684973.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase [Streptomyces
           ghanaensis ATCC 14672]
 gi|291436352|ref|ZP_06575742.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291339247|gb|EFE66203.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 324

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 14/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L  E A          L   A IEC+H  SLIHDD+  +D   +RRG+ +   
Sbjct: 43  GKLLRPILCMESAKAVGGTAEQVLAFAAGIECLHVASLIHDDI--VDQDPVRRGRASTAE 100

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           QY    A++AG+GL       + S  P  ++    R  +         L+ M  G M + 
Sbjct: 101 QYGLAEALVAGDGLSMAGIAAMLSGGPAERVLHAARVTVE-------ALRHMCQGIMRET 153

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   D       V  +   KT AL   AC++GAI+A A+  + + L  +GE LG+ FQ+ 
Sbjct: 154 EIRGDLTCAVPTVLNVIHDKTAALTGAACQAGAILAGATPGQTQALHQYGEQLGMAFQIR 213

Query: 225 DDLL 228
           DDLL
Sbjct: 214 DDLL 217


>gi|21227869|ref|NP_633791.1| dimethylallyltransferase [Methanosarcina mazei Go1]
 gi|20906283|gb|AAM31463.1| Dimethylallyltransferase [Methanosarcina mazei Go1]
          Length = 324

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 17/229 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  +++  S  +D  +D+LL  T         + L  A RY +  GGK++R  ++   A 
Sbjct: 6   LVDEIKNRSSHVDAAIDELLPVT-------RPEELYKASRYLVDAGGKRLRPAVLILAAE 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N  + L    A+E +H ++LIHDD+   D+  IRRG P VH+++ E  AI+AG+ L
Sbjct: 59  AVGSNLRSVLPAAVAVELVHNFTLIHDDIMDRDD--IRRGMPAVHVKWGEAGAILAGDTL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
            + AFEI+S  + +    ++   +LS T       +  GQ LD+  E    + E++   +
Sbjct: 117 YSKAFEILSKVENEPVRVLKCMDVLSKTCT----EICEGQWLDMDFETRKKVTESEYLEM 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + KT  L   A + GA++  AS    E L  +G  +GI FQ+ DD+LD
Sbjct: 173 VEKKTSVLYAAAAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLD 221


>gi|224371856|ref|YP_002606022.1| IspB [Desulfobacterium autotrophicum HRM2]
 gi|223694575|gb|ACN17858.1| IspB [Desulfobacterium autotrophicum HRM2]
          Length = 327

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    + L N     AL V    E +H  +L+HDD+  +D   +RRG+ T H
Sbjct: 46  GGKRLRPLLFLLSSRLCNYGGDLALDVSTLFEYLHAATLLHDDV--VDEAEMRRGRKTAH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ LL  +  + +        N+ S +   ++     QG +    LD +
Sbjct: 104 STWGAAQVVLTGDFLLARSLCLAARTGRPEIINVISGITEEMS-----QGEI--DQLDKK 156

Query: 169 DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  + E +   I K KT  L+  AC SGAI++ A  + ++ L  +G +LG+ FQ+ADDL
Sbjct: 157 GKLNLSEAEYMAIIKGKTAVLIQGACRSGAILSRAPADREQALADYGYHLGMAFQMADDL 216

Query: 228 LDCEED 233
           LD   D
Sbjct: 217 LDYTAD 222


>gi|258511659|ref|YP_003185093.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478385|gb|ACV58704.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 321

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR      C            ++ AA+E IH  +L+HDD+  +D   +RRGKPTV 
Sbjct: 43  GGKRIRPLFALICGLGEREWSEDVAKIAAALEMIHMATLVHDDV--IDRADLRRGKPTVR 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y  + A+  G+ L   A ++++       DN+    +++     G+  +  G++  I+
Sbjct: 101 KSYGNLAAMYTGDYLFARAIQLLAEV-----DNLEVHRLMAR----GIVLLCEGEIEQIE 151

Query: 169 DEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           D F + +Q  M        KT  L+  +C+ GA++  A + E   L  FG  +G+ FQ+ 
Sbjct: 152 D-FYNWSQGVMTYLRRIHRKTALLISLSCQLGAMVGGAPEREVAALARFGHAVGMAFQIV 210

Query: 225 DDLLD 229
           DDLLD
Sbjct: 211 DDLLD 215


>gi|94497263|ref|ZP_01303835.1| Farnesyltranstransferase [Sphingomonas sp. SKA58]
 gi|94423368|gb|EAT08397.1| Farnesyltranstransferase [Sphingomonas sp. SKA58]
          Length = 378

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA L         ++ AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 97  GGKRLRPMLTLACADLVGYAGARHYKLAAAVEFIHTATLLHDDV--VDGSGMRRGRKTAN 154

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L + +FE++        ++++   +LS    +  +G +  Q+   +
Sbjct: 155 IIWGNSASVLVGDFLFSRSFELMVE-----AESLKVLKILSGASAVIAEGEVN-QLTAQR 208

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E Q   I   KT AL   AC   A++A  S+ E++ L  +G NLGI FQL DD +
Sbjct: 209 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRSEAEEQALDVYGRNLGIAFQLIDDAI 268

Query: 229 DCEED 233
           D E D
Sbjct: 269 DYESD 273


>gi|306817884|ref|ZP_07451623.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
           35239]
 gi|304649363|gb|EFM46649.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
           35239]
          Length = 339

 Score = 81.3 bits (199), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 31/236 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  KL E   R++  L +      +    ++   ++S +R A  GGK++R  LV   + 
Sbjct: 10  ALEEKLTEALSRVEARLVE-----ETRTAQENTTEIVSHLRAA--GGKRMRPLLVLLISQ 62

Query: 64  LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           L N      +       G A+E  H  SL HDDL  MD+  +RRG    H++++   A++
Sbjct: 63  LGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAVM 120

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFID 173
           AG+ +   A  I+S    +L             H    Q +  GQM DI      D+ ID
Sbjct: 121 AGDLIFARASLIVSDFGRELMKY----------HARTFQRLCLGQMHDILGPGATDDPID 170

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                 + + KTG+L+  A   GA ++  S      +  FGE+LG+ FQ+ADD+LD
Sbjct: 171 --FYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLD 224


>gi|218961607|ref|YP_001741382.1| putative geranyltranstransferase [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730264|emb|CAO81176.1| putative geranyltranstransferase [Candidatus Cloacamonas
           acidaminovorans]
          Length = 303

 Score = 81.3 bits (199), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 119/220 (54%), Gaps = 19/220 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-----NHLT-- 71
           L D  L+ A   + ++   L  AI  A++ GGK+ R  L+    S+F +      H T  
Sbjct: 23  LIDQELKNALTFEDKYATELKKAIYEAVIPGGKRWRPLLLL---SMFEMLTGFKKHRTFP 79

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL+   AIE +H  +++HDDLPS+ N   RRG+P +HI+Y    AI+A + L + A+EI
Sbjct: 80  DALKSSVAIELLHNGAIVHDDLPSVMNRTQRRGQPALHIKYGNAIAILAADALYSLAYEI 139

Query: 131 ISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKMKTGA 187
           IS    +LK+  +S + +  L++     GM+GGQ+  L  + + +    +  I   K G+
Sbjct: 140 IS----ELKNPEQSLEAIRILSNATKSYGMIGGQVVALSSRHKVMKINTLNYIDMKKVGS 195

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           L+  + +   +++ A +   + +R +  NLGI +Q+ +D+
Sbjct: 196 LLQASADIACLLSRADEETHQVMRAYALNLGIAYQMIEDI 235


>gi|257452495|ref|ZP_05617794.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_5R]
 gi|317059036|ref|ZP_07923521.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_5R]
 gi|313684712|gb|EFS21547.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_5R]
          Length = 316

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 15/185 (8%)

Query: 50  GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK  R+ L+  CASL   +        ++ A +E  H  SLIHDD+  +D+   RRGK +
Sbjct: 34  GKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVELTHLASLIHDDI--VDDSPYRRGKIS 91

Query: 107 VHIQYDEVTAIIAGNGLLT--YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           +  +Y +  A+ AG+ L+   Y +E +            S  +LS T      G +G  +
Sbjct: 92  IQGKYGKDAAVYAGDFLMARIYYYEAVERLN-------ESAALLSKTVEHMCTGEIGQDL 144

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +++   E     IQ  KT AL   AC  GA+ A  SQ   E+L+ FG NLG++FQL 
Sbjct: 145 CRYREDVSVEEYFQNIQG-KTAALFETACHIGAMEAGCSQEMIEKLKLFGRNLGMMFQLK 203

Query: 225 DDLLD 229
           DD+LD
Sbjct: 204 DDILD 208


>gi|311068789|ref|YP_003973712.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus
           1942]
 gi|310869306|gb|ADP32781.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus
           1942]
          Length = 320

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V       N +      V   +E IH  SL+HDD+  +D+  +RRGKPT+ 
Sbjct: 43  GGKRIRPVFVLLSGMFGNYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +L  + E+++         I SQ ++ +           G++  I+
Sbjct: 101 AKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQIK 151

Query: 169 DEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+ D
Sbjct: 152 DKYNMEQNLRTYLRRIKRKTAILIAVSCQLGAIASGADEKVHKALYWFGYYVGMSYQIID 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    EE+L K
Sbjct: 212 DILDFTSTEEELGK 225


>gi|5631299|dbj|BAA82615.1| farnesyl, geranylgeranyl, geranylfarnesyl, hexaprenyl, heptaprenyl
           diphosphate synthase (SelF-HepPS) [Synechococcus
           elongatus]
          Length = 324

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +RYAL  GGK++R  +    A     +   A  V AA+E +H ++LIHDD+  MD   +R
Sbjct: 30  VRYALASGGKRLRPLITLLAAEACGSSPADAAPVAAAVEILHNFTLIHDDI--MDRSPLR 87

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PTV+  +D+ TAI+AG+ ++  A+ ++S         +   L+   +       +  
Sbjct: 88  RGRPTVYRAWDDATAILAGDTMMGIAYRLLSE---HYPAEVCQHLVAECSS--AFVDVCI 142

Query: 162 GQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GQ  D+    +    +    +M   KT  L   A  +G I+A A  +    LR +G  LG
Sbjct: 143 GQAEDLAFRTMPSVTMDDYLRMIGRKTARLFATAAVAGGIVARAPHDVLAALRTYGTALG 202

Query: 219 IIFQLADDLLD 229
           + FQ+ DD+LD
Sbjct: 203 MAFQIRDDVLD 213


>gi|296111457|ref|YP_003621839.1| heptaprenyl diphosphate synthase, component II, putative
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832989|gb|ADG40870.1| heptaprenyl diphosphate synthase, component II, putative
           [Leuconostoc kimchii IMSNU 11154]
          Length = 332

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 16/195 (8%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           AIR  L  GK +R  L    + L + ++  +A+ +GA++E +H  +LIHDD+  +D   +
Sbjct: 41  AIRSQLNAGKLVRPALTLIFSRLTSESYNQSAISLGASVELLHLATLIHDDI--IDESKL 98

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  ++  Q+ + TA+ AG+ LLT  F ++        +       L+LT    LQ +L
Sbjct: 99  RRGHESIQSQFGKDTAVYAGDYLLTGMFSLLERADKPAANK------LALT---ALQEIL 149

Query: 161 GGQMLDIQDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGEN 216
            G++L  Q+ + ID T    F   K KT AL   +   G +      +E    +   GEN
Sbjct: 150 FGELLQKQNRYNIDTTFSAYFSQIKGKTAALFKLSATFGLVSGTDYSDELFSTVSHLGEN 209

Query: 217 LGIIFQLADDLLDCE 231
           +GI FQL DD LD E
Sbjct: 210 IGITFQLLDDYLDFE 224


>gi|261345175|ref|ZP_05972819.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541]
 gi|282566867|gb|EFB72402.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541]
          Length = 323

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          +     +V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+A+A+  +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPNITEENYMQVIYSKTARLFEAASHASAILANATPAQEKALQDYGRYIGTAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|257466362|ref|ZP_05630673.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917518|ref|ZP_07913758.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691393|gb|EFS28228.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 316

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 15/185 (8%)

Query: 50  GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK  R+ L+  CASL   +        ++ A +E  H  SLIHDD+  +D+   RRGK +
Sbjct: 34  GKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVELTHLASLIHDDI--VDDSPYRRGKIS 91

Query: 107 VHIQYDEVTAIIAGNGLLT--YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           +  +Y +  A+ AG+ L+   Y +E +            S  +LS T      G +G  +
Sbjct: 92  IQGKYGKDAAVYAGDFLMARIYYYEAVERLN-------ESAALLSKTVEHMCTGEIGQDL 144

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +++   E     IQ  KT AL   AC  GA+ A  SQ   E+L+ FG NLG++FQL 
Sbjct: 145 CRYREDVSVEEYFQNIQG-KTAALFETACHIGAMEAGCSQEMIEKLKLFGRNLGMMFQLK 203

Query: 225 DDLLD 229
           DD+LD
Sbjct: 204 DDILD 208


>gi|193216089|ref|YP_001997288.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193089566|gb|ACF14841.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 324

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 14/187 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  LV   A L    +    R  A +E +H  +L+HDD+  +D   +RRG P V+ 
Sbjct: 44  GKQIRPALVLLSAKLVGGVNEGTYRAAALVELLHTATLVHDDV--VDTADMRRGLPAVNA 101

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+    Y          Q  D     L L++  +  ++ M  G++L I+ 
Sbjct: 102 LWKNKVAVLMGD----YLLARGLLLALQNGDT----LFLNIVSD-AVRRMSEGELLQIEK 152

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                IDE   F I   KT +L+  ACE GA  A   +  ++ LR  GE LG+ FQ+ DD
Sbjct: 153 TRHLDIDEETYFKIISDKTASLISTACELGAASASTDEKVRQSLRDCGEALGLAFQIRDD 212

Query: 227 LLDCEED 233
           +LD + D
Sbjct: 213 ILDYQGD 219


>gi|283780902|ref|YP_003371657.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
 gi|283439355|gb|ADB17797.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
          Length = 349

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 23/231 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQ--TQHNDRLLSA--------IRYA-LLGGKKIRSFLVTE 60
           NS     IL+ L    A+ MQ   Q     LS+        +RY  LLGGK++R  L+  
Sbjct: 23  NSPATTAILNTLYAPVAAEMQLIEQRLRTELSSKHPFVDELVRYGCLLGGKRLRPALLLL 82

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                       L +   +E IH  +L+HDD+  +D   +RR   TV+ ++D  ++++ G
Sbjct: 83  TGKALGGITPAHLTLATVVEMIHTATLVHDDV--LDEAKVRRHLATVNARWDNESSVLLG 140

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLDIQDEFIDETQVF 178
           + L T+AF + S+      D +    ++    NI  +G L   G   + +   + +++ F
Sbjct: 141 DYLFTHAFHLAST-----LDTVVGCRVIGRATNIVCEGELLQKGSRGNFR---LTQSEYF 192

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            I + KT  L   +C  GA  + AS    +++  FG +LGI FQ+ADDLLD
Sbjct: 193 EIIEGKTAELTACSCYLGAHFSAASVEVCDQMDGFGRDLGIAFQIADDLLD 243


>gi|317401225|gb|EFV81869.1| octaprenyl-diphosphate synthase [Achromobacter xylosoxidans C54]
          Length = 321

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPAMVLMVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++        D++R   +LS    +  +G +  Q+L++ 
Sbjct: 101 AVFGNAASVLVGDYLYSRSFEMMVE-----ADSMRIMSILSEATTVIAEGEVL-QLLNVH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + + +   + + KT  L   A + GA++A A+  ++     +G ++G  FQL DD+L
Sbjct: 155 DPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSGD 219


>gi|134300012|ref|YP_001113508.1| trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1]
 gi|134052712|gb|ABO50683.1| Trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1]
          Length = 320

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 31/231 (13%)

Query: 9   LQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           LQ     I TI+   D LL QT+ H        LL+A      GGK++R          +
Sbjct: 12  LQVVEHEIKTIVQSRDPLLTQTSIH--------LLNA------GGKRLRPAFALLAGKFY 57

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           + +    L +  A+E IH  +L+HDD+  +D+   RRG PTV   +    ++  G+ L  
Sbjct: 58  HYSLEKLLPLAVALELIHMATLVHDDV--VDDSLTRRGTPTVKANWGNRISMHTGDYLFA 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQK 182
            +  +IS    Q ++ + +Q++   +       M  G+M  I   +  E      F   K
Sbjct: 116 KSLVLIS----QYENPLIAQVLADTS-----VMMCEGEMHQISTAYSAEQSWRDYFYRIK 166

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT  L+  +C+ GA+   A + E + LR +G +LG+ FQ+ DD+LD   D
Sbjct: 167 RKTALLIAASCQLGAVAVGAPEEEYKNLRRYGHHLGMAFQITDDILDMVAD 217


>gi|308069508|ref|YP_003871113.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
           subunit 2) [Paenibacillus polymyxa E681]
 gi|305858787|gb|ADM70575.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
           subunit 2) [Paenibacillus polymyxa E681]
          Length = 324

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 96/184 (52%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V         +     R+   +E IH  SL+HDD+  +D+  +RRG+PTV 
Sbjct: 43  GGKRLRPVFVLLGGKFGEYDLDKLKRIAVPLELIHSASLVHDDV--IDDAEMRRGQPTVK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +   A  I +         + S+ ++ ++          G+M  I+
Sbjct: 101 SKWDNRVAMYTGDYIYARALSIAAGLPNPDIHRVLSKALVQMSI---------GEMEQIR 151

Query: 169 DEF-IDET-QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D F +D++ + ++++ + KT  L+  +C+ GA+ A A ++    L  +G N+G+ FQ+ D
Sbjct: 152 DFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAAGARESVNSLLYSYGYNVGMAFQIQD 211

Query: 226 DLLD 229
           DLLD
Sbjct: 212 DLLD 215


>gi|237730107|ref|ZP_04560588.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2]
 gi|226908713|gb|EEH94631.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2]
          Length = 370

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 90  GGKRIRPMIAVLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 147

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S       +++   ++S   N+  +G +  Q++++ 
Sbjct: 148 AAFGNAASVLVGDFIYTRAFQMMTS-----LGSLKVLEVMSKAVNVIAEGEVL-QLMNVN 201

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  S+ +++ L+ +G  LG  FQL DDLL
Sbjct: 202 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSEEQEKGLQDYGRYLGTAFQLIDDLL 261

Query: 229 DCEED 233
           D   D
Sbjct: 262 DYSAD 266


>gi|229845932|ref|ZP_04466044.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1]
 gi|229810936|gb|EEP46653.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1]
          Length = 323

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    ET    +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSETNYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|260591948|ref|ZP_05857406.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319]
 gi|260536232|gb|EEX18849.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319]
          Length = 326

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK++R  L+   A  F             +E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  AGKRMRPILILLIAKNFGKVSSITQHAAVGLELLHTASLVHDDV--VDEAAERRGQASVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             YD   A++ G+ +L+ A   +S   +++     ++L  +L+    LQ      + +IQ
Sbjct: 102 ADYDNKVAVLVGDYVLSTALLHVSYTHSEMIVRRLAELGRTLSDGEILQ------LSNIQ 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           ++ + E   + I + KT AL       GA  A A++ + E  R FG+NLGI+FQ+ DD+ 
Sbjct: 156 NKEVTEEVYYKIIERKTAALFETCAAIGAESAGATEEQVEAARLFGKNLGIVFQIRDDIF 215

Query: 229 D 229
           D
Sbjct: 216 D 216


>gi|84494916|ref|ZP_00994035.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649]
 gi|84384409|gb|EAQ00289.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649]
          Length = 328

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 26/236 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
           ++ GL  +L +   R++ ++++         +  H+D  ++     LL  GGK+ R  L 
Sbjct: 8   VSAGLQERLTDGLARVEALIEE---------RIDHDDPFIAEANVHLLRAGGKRFRPMLT 58

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A L    +   +   AA+E  H  SL HDD+  MD   +RRG PT +  Y   TAI+
Sbjct: 59  ILAAELGEGVNDAVVTAAAAVELTHLASLYHDDV--MDEADLRRGTPTANAAYGNSTAIL 116

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQV 177
            G+ L  +A  +++    +    I+++  + L           GQ+ D  Q    +++  
Sbjct: 117 IGDLLFGHASALVAELGAEAV-RIQAETFIRLCT---------GQIRDDRQAPAGEDSGA 166

Query: 178 FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + ++ +  KTG L+  A   GA+ A    +  E +R +GE LG+ FQLADDL+D E
Sbjct: 167 YYLRVLEDKTGVLIATAARYGAMFAGCEDDVIETMRVYGERLGMAFQLADDLIDIE 222


>gi|290958235|ref|YP_003489417.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22]
 gi|260647761|emb|CBG70866.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei
           87.22]
          Length = 336

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++D   A++ G+ L   A  +++       D +R Q           + ++ GQ+L   
Sbjct: 111 ARWDNSLAVLTGDFLFARASHVLADLG---PDAVRIQAE-------AFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  A   GA+MA A +   + L  +GE LG+
Sbjct: 161 GPRDGRDPIDHYLD------VLGGKTGSLVAVAGRLGALMAGADETVVDVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDVASD 228


>gi|297529620|ref|YP_003670895.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           C56-T3]
 gi|297252872|gb|ADI26318.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           C56-T3]
          Length = 320

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A   + +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+ 
Sbjct: 43  GGKRIRPVFVLLSARFGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A+  G+ L   + E ++   +     + ++ ++ + H         G++  I+
Sbjct: 101 ARWSNRFAMYTGDYLFARSLERMAELDSPRAHQVLAKTIVEVCH---------GEIEQIK 151

Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  D+     ++++  KT  L+  +C+ GA+ A A +    +L  FG  +G+ FQ+ D
Sbjct: 152 DKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITD 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    EE L K
Sbjct: 212 DILDFTGTEEQLGK 225


>gi|293602311|ref|ZP_06684757.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC
           43553]
 gi|292819073|gb|EFF78108.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC
           43553]
          Length = 321

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPAMVLMVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++        D++R   +LS    +  +G +  Q+L++ 
Sbjct: 101 AVFGNAASVLVGDYLYSRSFEMMVE-----ADSMRIMSILSEATTVIAEGEVL-QLLNVH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + + +   + + KT  L   A + GA++A A+  ++     +G ++G  FQL DD+L
Sbjct: 155 DPDVSQDRYLQVVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSGD 219


>gi|288925940|ref|ZP_06419870.1| octaprenyl-diphosphate synthase [Prevotella buccae D17]
 gi|288337364|gb|EFC75720.1| octaprenyl-diphosphate synthase [Prevotella buccae D17]
          Length = 325

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L+   A  F        R    +E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKRMRPMLILLMAKNFGEVTEVTQRATVGLELLHTASLVHDDV--VDESGERRGQASVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y+   A++ G+ +L+ A   +S    Q      +QL  +L++   LQ      + +I++
Sbjct: 103 SYNNKVAVLVGDYILSTALLNVSLTGDQAIITYLAQLGRTLSNGEILQ------LTNIRN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + I E   + + + KT AL       GA+   A + + E  R FG+NLGIIFQ+ DD+ D
Sbjct: 157 QEISEEVYYQVIRQKTAALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIRDDIFD 216


>gi|228476073|ref|ZP_04060781.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           hominis SK119]
 gi|228269896|gb|EEK11376.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           hominis SK119]
          Length = 318

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 19/201 (9%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91
           ND +L    + LL  GGK++R   V   +S F    +T     V  A+E IH  +L+HDD
Sbjct: 24  NDSVLQEAAFHLLSSGGKRVRPAFVL-LSSQFGPKKITEDTYHVAVALELIHMATLVHDD 82

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RRGK T+  ++D  TAI+ GN LL    + +S  +      I S  ++ + 
Sbjct: 83  V--IDKSDKRRGKLTIEKKWDVTTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVC 140

Query: 152 HNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                     G++   QD+F      T        KT  L+  + E GAI + A      
Sbjct: 141 R---------GELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIR 191

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           +L+  G  +G+ FQ+ DD+LD
Sbjct: 192 KLKMIGHYIGMSFQIVDDILD 212


>gi|253573826|ref|ZP_04851169.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251847354|gb|EES75359.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 799

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 18/233 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV-TECASLFN 66
           +Q   K +D IL   +  TAS + T+ +  L+    Y+L G GK++R  L       ++ 
Sbjct: 512 VQTARKHVDAILP--ITSTASSLITE-DPLLVDTANYSLEGSGKRLRPILAWVMGVQVYG 568

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++      +  A+E +H  SLI DDLPS DN   RRGKPT+H  ++   A + G  L+  
Sbjct: 569 LDPAALSPLFRALEYMHTASLIFDDLPSQDNSPSRRGKPTLHEVHNSAIAELTGIFLIQK 628

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--- 183
           A E  +S K    +++ + L+  L+   G   M  GQ +D+      + +V  ++++   
Sbjct: 629 AVEEQASLKGFDNESVLA-LLQYLSRKAGEICM--GQAMDLN----AKGKVLTVEELDRI 681

Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTG        + AI+A A++ E   L+ F  + GI FQ+ DDLLD E D
Sbjct: 682 CFYKTGIAFEACLVAPAILARANETEIAVLKNFAYHTGIAFQIKDDLLDGEGD 734


>gi|331684834|ref|ZP_08385426.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H299]
 gi|331078449|gb|EGI49655.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H299]
          Length = 323

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   T+++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNATSVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|239918251|ref|YP_002957809.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|281415557|ref|ZP_06247299.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|239839458|gb|ACS31255.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
          Length = 354

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 53/248 (21%)

Query: 7   SKLQENSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + L++  +++D+ L  DDL   TA+H        L++A      GGK++R  L T  ASL
Sbjct: 29  TALEQVEEQLDSALGFDDLFSDTAAH-------HLMAA------GGKRVRPVL-TVLASL 74

Query: 65  FNVNHLT----------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
                L           A +    +E  H  +L HDD+  MD   +RRG P  H  +   
Sbjct: 75  LGDPALASGEVADVDAPARQAAVVMELTHLATLYHDDV--MDEAPVRRGAPAAHRLWGNS 132

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQG-----MLGGQMLDIQ 168
            AI+AG+ +   A                SQLM  L T  + +Q      ++ GQ+ + +
Sbjct: 133 AAILAGDLIFARA----------------SQLMAELGTRPVQIQADTFERLVQGQLWETR 176

Query: 169 D--EFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              E  D  +  + +   KTG+L+  A   GA++  A +   + +R +GE +G+ FQLAD
Sbjct: 177 GPAEGTDPIEHYYAVLSGKTGSLIAAAGMLGALLGGADEAAVQVMRAYGEKVGLAFQLAD 236

Query: 226 DLLDCEED 233
           DL+D   D
Sbjct: 237 DLIDLTGD 244


>gi|56420745|ref|YP_148063.1| heptaprenyl diphosphate synthase component II [Geobacillus
           kaustophilus HTA426]
 gi|56380587|dbj|BAD76495.1| heptaprenyl diphosphate synthasecomponent II (spore germination
           protein C3) [Geobacillus kaustophilus HTA426]
          Length = 320

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A   + +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+ 
Sbjct: 43  GGKRIRPVFVLLSARFGHYDFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A+  G+ L   + E ++   +     + ++ ++ + H         G++  I+
Sbjct: 101 ARWSNRFAMYTGDYLFARSLERMAELDSPRAHQVLAKTIVEVCH---------GEIEQIK 151

Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  D+     ++++  KT  L+  +C+ GA+ A A +    +L  FG  +G+ FQ+ D
Sbjct: 152 DKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITD 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    EE L K
Sbjct: 212 DILDFTGTEEQLGK 225


>gi|319406067|emb|CBI79697.1| octaprenyl-diphosphate synthase [Bartonella sp. AR 15-3]
          Length = 337

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 56  GGKRIRPMITLATAHMFEYQGDEHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTAR 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +I+ G+ LL  AF+++         ++ S   LS+  N     +  G+++ + 
Sbjct: 114 ILWGNQASILVGDFLLGQAFKMMV--------DVGSLEALSVLSNAAAI-IAEGEVMQLS 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                ET V     I K KT AL   A E G I+A     E+  L  +G +LG+ FQL D
Sbjct: 165 AAKNIETNVSDYLKIIKAKTAALFSAAAEIGPIIAGYGHEERSALHQYGLSLGLAFQLID 224

Query: 226 DLLD 229
           D+LD
Sbjct: 225 DVLD 228


>gi|154245320|ref|YP_001416278.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
 gi|154159405|gb|ABS66621.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
          Length = 335

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CASL        +++ A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 54  GGKRLRPMLTLACASLSGYRGDGHVKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +    +I +     +     +Q          +
Sbjct: 112 KLWGNEASVLVGDFLLGQAFKMMVEVGSMTCLDILATAACVIAEGEVMQLAAAKNTATSE 171

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT  L   ACE GA++    + E+   R +G NLGI FQL DD L
Sbjct: 172 DDYL------AVIRGKTAELFAAACEVGAVLGQRPKAEQAACRSYGMNLGIAFQLVDDAL 225

Query: 229 D 229
           D
Sbjct: 226 D 226


>gi|322831197|ref|YP_004211224.1| Polyprenyl synthetase [Rahnella sp. Y9602]
 gi|321166398|gb|ADW72097.1| Polyprenyl synthetase [Rahnella sp. Y9602]
          Length = 323

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 17/224 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72
           ID   DD+    AS ++  +++  L++ + Y ++  GGK+IR  +    A   +      
Sbjct: 7   IDLTQDDMAAVNASILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAAKALSYQGDKH 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           ++V A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T AF++++
Sbjct: 67  IKVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMT 124

Query: 133 SPKTQLKDNIRSQLMLSLTH---NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
                   ++ S  +L+L     N+  +G +  Q+++  D  I E     +   KT  L 
Sbjct: 125 --------DLESLPVLALMAKAVNVIAEGEVQ-QLINCNDPDITEASYMQVIYSKTARLF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A ++ A++A  +  +   L+ +G  LG  FQL DDLLD + D
Sbjct: 176 EAASQASAMLAGGNNEQITALQDYGRYLGTAFQLIDDLLDYDAD 219


>gi|90422801|ref|YP_531171.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
 gi|90104815|gb|ABD86852.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
          Length = 288

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 15/214 (7%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV-TECASLFNVNHL 70
           + RI+  L D +   A    T    RL  A+RYA+   G ++R  L  +  A+    N  
Sbjct: 4   TNRIERALTDAIGLAAV---TGCPPRLAEAMRYAVFPRGARVRPRLCHSVAAACGEDNPA 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                GAA+E +HC SL+HDDLP  D    RRG+P+VH  + E  A++ G+ L+  AF+ 
Sbjct: 61  ATEAAGAALELMHCASLVHDDLPCFDGAATRRGRPSVHKAFGEPLAVLTGDALIVLAFQT 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I+  +        + L +++   +G+  G++ GQ  + + E      +    + KTGAL 
Sbjct: 121 IA--RVTCAPERLAALTMTIGQAVGVPFGIVAGQAWECESEI----NLAHYHRSKTGALF 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                + A  A ++  + E  R  GE +G  +Q+
Sbjct: 175 ---VAATAAGAASAGADPEPWRLVGEKIGEAYQV 205


>gi|288931868|ref|YP_003435928.1| dimethylallyltranstransferase [Ferroglobus placidus DSM 10642]
 gi|288894116|gb|ADC65653.1| Dimethylallyltranstransferase [Ferroglobus placidus DSM 10642]
          Length = 318

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 17/226 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           ++E  KR + + D++       +  +  ++L  A R+ +  GGK++R  L          
Sbjct: 3   VEEIKKRAEIVNDEI----KKFLPVKEPEKLYKAARHLINAGGKRLRPVLSLIACEAIER 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   L    AIE +H ++LIHDD+  MD   +RRG  TVH  Y   TAI+AG+ L   A
Sbjct: 59  DYRKILPAAVAIEVVHNFTLIHDDI--MDEDELRRGVKTVHTIYGVPTAILAGDTLFAEA 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF----MIQKM 183
           F+I+S  + + ++ +     L+    + ++ +  GQ +DI+ E  +         M++K 
Sbjct: 117 FKIMSYCEVESENLVNGMRKLA---EVCVE-ICEGQQMDIEFEEREFVSEEEYLEMVRK- 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT  L+  +    AI+    + EK  L  +G N GI FQ+ DD+LD
Sbjct: 172 KTSVLIALSSSIPAILFGEKKYEK-ALWNYGINAGIAFQIKDDILD 216


>gi|315606906|ref|ZP_07881913.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574]
 gi|315251414|gb|EFU31396.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574]
          Length = 325

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L+   A  F        R    +E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKRMRPMLILLMAKNFGEVTEVTQRATVGLELLHTASLVHDDV--VDESGERRGQASVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y+   A++ G+ +L+ A   +S    Q      +QL  +L++   LQ      + +I++
Sbjct: 103 SYNNKVAVLVGDYILSTALLNVSLTGDQAIITYLAQLGRTLSNGEILQ------LTNIRN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + I E   + + + KT AL       GA+   A + + E  R FG+NLGIIFQ+ DD+ D
Sbjct: 157 QEISEEVYYQVIRQKTAALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIRDDIFD 216


>gi|29831407|ref|NP_826041.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29608522|dbj|BAC72576.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
           MA-4680]
          Length = 336

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLAARFGDPYAPGLVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L+  
Sbjct: 111 ARWGNSVAVLTGDFLFARASHILADLGPE---AVRVQAE-------AFERLVTGQILETA 160

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                   V     +   KTGAL+  AC  GA+M+ A +   + L  +GE LG+ FQLAD
Sbjct: 161 GPMDGRDPVEHYLEVLSGKTGALVAVACRFGAMMSGADETVVDVLTQYGERLGVAFQLAD 220

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 221 DVLDIASD 228


>gi|303258213|ref|ZP_07344220.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47]
 gi|302858966|gb|EFL82050.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47]
          Length = 326

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 16/211 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           ++DDL  Q+   +  + +D +++A      GGK++R  ++   A          + +   
Sbjct: 26  VIDDL--QSDIPLIKKISDYIVTA------GGKRMRPIVLMLIARALGYQGKEHIFLATM 77

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +H  SL+HDD+  +D   +RRGKPT   ++    AI+ G+ + + AF+++   +TQ 
Sbjct: 78  IEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAAAILTGDFMYSRAFQLMV--RTQ- 132

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
             N+R   +++   N   +G +  Q+L+I D  +DE + F + + KTG L   A    ++
Sbjct: 133 --NLRICEIVAGAVNRVSEGEVI-QLLNIHDTTLDEARYFDVIERKTGVLFEAAARMASV 189

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +A AS+  ++++  +   LG  FQ+ DD+LD
Sbjct: 190 VAGASKEVEDKMAEYALCLGRAFQIIDDVLD 220


>gi|85714244|ref|ZP_01045232.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
 gi|85698691|gb|EAQ36560.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
          Length = 336

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L   +    +++ A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMANLAGYSGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G ++    + E+     FG NLGI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLGGRPKAEETAAASFGMNLGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|306820179|ref|ZP_07453823.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
 gi|304551780|gb|EFM39727.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
          Length = 317

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 13/186 (6%)

Query: 48  LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L GK +R  L+  CA L   +  N     ++ A +E  H  SLIHDD+  +DN   RRGK
Sbjct: 31  LSGKMLRPKLLLLCAFLGSNWKNNREKICKLAAMVELTHLASLIHDDI--VDNSPYRRGK 88

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQ 163
            ++  +Y +  A+ AG+ L++  F   +      ++N+   + +LS T      G +  Q
Sbjct: 89  TSLQGKYGKDAAVFAGDFLISRIFHYGT------EENLNEAVSVLSKTVEYMCIGEIE-Q 141

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            L+   E I E + F I + KT AL   AC  GA  A  S+   ++L  F +NLG++FQL
Sbjct: 142 DLNRYREDISEKKYFEIIENKTAALFQVACHIGAKEAGCSEENIKKLELFVKNLGLMFQL 201

Query: 224 ADDLLD 229
            DD+LD
Sbjct: 202 KDDILD 207


>gi|89093572|ref|ZP_01166520.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92]
 gi|89082262|gb|EAR61486.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92]
          Length = 322

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A+         + + A IE IH  +L+HDD+  +DN  +RRGK T +
Sbjct: 43  GGKRLRPLLVLLAANAAGYKGDKHVPLAAIIEFIHTATLLHDDV--VDNSDLRRGKDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLD 166
            ++    +++ G+ L + AF+I+    +        Q+M  +S   N+  +G +  Q+L+
Sbjct: 101 AKWGNAPSVLVGDFLYSRAFQIMVEIGSM-------QIMEVISNATNVIAEGEVL-QLLN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++    E     +   KT  L   A E+GAI+A A+  E+E LR +G +LG  FQL DD
Sbjct: 153 TKNPDTTEEAYMQVILGKTAMLFEAATEAGAILADATAEEREGLRLYGLHLGTAFQLIDD 212

Query: 227 LLD 229
           ++D
Sbjct: 213 VMD 215


>gi|331000286|ref|ZP_08323970.1| octaprenyl pyrophosphate synthetase [Parasutterella
           excrementihominis YIT 11859]
 gi|329572452|gb|EGG54105.1| octaprenyl pyrophosphate synthetase [Parasutterella
           excrementihominis YIT 11859]
          Length = 326

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 16/211 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           ++DDL  Q+   +  + +D +++A      GGK++R  ++   A          + +   
Sbjct: 26  VIDDL--QSDIPLIKKISDYIVTA------GGKRMRPIVLMLIARALGYQGKEHIFLATM 77

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +H  SL+HDD+  +D   +RRGKPT   ++    AI+ G+ + + AF+++   +TQ 
Sbjct: 78  IEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAPAILTGDFMYSRAFQLMV--RTQ- 132

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
             N+R   +++   N   +G +  Q+L+I D  +DE + F + + KTG L   A    ++
Sbjct: 133 --NLRICEIVAGAVNRVSEGEVI-QLLNIHDTTLDEARYFDVIERKTGVLFEAAARMASV 189

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +A AS+  ++++  +   LG  FQ+ DD+LD
Sbjct: 190 VAGASKEVEDKMAEYALCLGRAFQIIDDVLD 220


>gi|28868024|ref|NP_790643.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28851260|gb|AAO54338.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|330878952|gb|EGH13101.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330966393|gb|EGH66653.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 322

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMKILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +  AS+ + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|319789063|ref|YP_004150696.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
 gi|317113565|gb|ADU96055.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
          Length = 324

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 20/191 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L      L        + V   +E +H  +L+HDD+  +D   +RRG+P+V+
Sbjct: 43  GGKRVRPGLTVIAGKLVEAPLDRLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRPSVN 100

Query: 109 IQYDEVTAIIAGNGLLT---YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +    A++ G+ +     Y   +   P+  LK   ++           +Q M  G++L
Sbjct: 101 AVFGNDVAVLVGDYMFAKAIYVLAVYGGPEV-LKTAAKT-----------VQDMAEGELL 148

Query: 166 DIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            ++   D  + E + F I   KT +L+   CE GAI+  AS+ E++ L+ +G  +G  FQ
Sbjct: 149 QLEKIGDINLTEEEYFDIIYRKTASLLSTCCECGAIVGGASEKERKALKDYGTYIGYAFQ 208

Query: 223 LADDLLDCEED 233
           L DD  D   D
Sbjct: 209 LVDDAFDYISD 219


>gi|304406942|ref|ZP_07388596.1| heptaprenyl diphosphate synthase component II [Paenibacillus
           curdlanolyticus YK9]
 gi|304343929|gb|EFM09769.1| heptaprenyl diphosphate synthase component II [Paenibacillus
           curdlanolyticus YK9]
          Length = 325

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   +  F    L  ++ +   +E IH  SL+HDD+  +DN   RRG+ TV
Sbjct: 43  GGKRIRPIFVL-LSGKFGQYRLDVMKNIAVPLELIHMASLVHDDV--IDNAETRRGQLTV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++D   A+  G+ +   A  +     T+L DN R   +LS      +  M  G+M  I
Sbjct: 100 KSKWDNRIAMYTGDYIHGKALTV----ATKL-DNPRIHQILSK----AMVEMCIGEMEQI 150

Query: 168 QDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D F  E  V  ++++ + KT  L+  +C+ GA+ A   +    RL  FG N+G+ FQ+ 
Sbjct: 151 RDFFNTEQSVRQYLLRIRRKTALLIAISCQLGALAAETDEKYANRLYRFGYNVGMAFQIR 210

Query: 225 DDLLD 229
           DD+LD
Sbjct: 211 DDVLD 215


>gi|296134998|ref|YP_003642240.1| Polyprenyl synthetase [Thiomonas intermedia K12]
 gi|295795120|gb|ADG29910.1| Polyprenyl synthetase [Thiomonas intermedia K12]
          Length = 326

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   +            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRLRPALLLLVSQALGFRGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ S  +    NI     L+   N+  +G +  Q+L++ 
Sbjct: 105 ALFGNSASVLVGDFLYSRAFQMMVSVGSMRILNI-----LADATNVIAEGEVL-QLLNMH 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A  N +E +   G + G  FQL DDLL
Sbjct: 159 DPEVDEQRYLQVIRFKTAKLFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|163785166|ref|ZP_02179857.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879568|gb|EDP73381.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 111

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 2/83 (2%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSM 95
           +L  A+ Y+L  GGK+IR  LV E A     N+L  +  +  A+E IH YSLIHDDLPSM
Sbjct: 29  KLFDAMHYSLNAGGKRIRPVLVLESAKACGKNNLEGIIDIALAVEIIHTYSLIHDDLPSM 88

Query: 96  DNGYIRRGKPTVHIQYDEVTAII 118
           DN  +RRGKPT H  Y E  AI+
Sbjct: 89  DNDDLRRGKPTCHKVYGEAVAIL 111


>gi|237747110|ref|ZP_04577590.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS]
 gi|229378461|gb|EEO28552.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS]
          Length = 329

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A            + A IE IH  +L+HDD+  +D   +RRG P+ +
Sbjct: 50  GGKRIRPVLVLLMAKALGYQGKQHQTLAATIEFIHTATLLHDDV--VDESELRRGIPSAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   ++++ G+ L T AF+++ S       N+R   +L+   N+  +G +  Q+++ +
Sbjct: 108 ALFGNASSVLVGDFLYTRAFQMMVSV-----GNMRILEVLAEATNLIAEGEVM-QLMNAR 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  IDE     +   KT  L   +   GA++AH S+ +      FG  +G+ FQL DD+L
Sbjct: 162 NAAIDEDGYMKVIYAKTAKLFEASSVLGALVAHVSEEKIGAAARFGRAVGMAFQLIDDML 221

Query: 229 DCEED 233
           D   D
Sbjct: 222 DYAGD 226


>gi|310642561|ref|YP_003947319.1| heptaprenyl diphosphate synthase component ii (spore germination
           protein c3) [Paenibacillus polymyxa SC2]
 gi|309247511|gb|ADO57078.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Paenibacillus polymyxa SC2]
          Length = 324

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V         +     R+   +E IH  SL+HDD+  +D+  +RRG+PTV 
Sbjct: 43  GGKRLRPVFVLLGGKFGEYDLDKLKRIAVPLELIHSASLVHDDV--IDDAEMRRGQPTVK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +   A  I +         + S+ ++ ++          G+M  I+
Sbjct: 101 SKWDNRVAMYTGDYIYARALSIAAGLPNPDIHRVLSKALVQMSI---------GEMEQIR 151

Query: 169 DEF-IDET-QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D F +D++ + ++++ + KT  L+  +C+ GA+ A A +     L  +G N+G+ FQ+ D
Sbjct: 152 DFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAAGARERVNSLLYTYGYNVGMAFQIQD 211

Query: 226 DLLD 229
           DLLD
Sbjct: 212 DLLD 215


>gi|212550626|ref|YP_002308943.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548864|dbj|BAG83532.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 328

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 8/180 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  ++   A L     +  +     +E +H  +LIHDD+  +DN  +RRG P+V  
Sbjct: 49  GKRIRPIILILSAKLCGEPTIKTIEYAVILELLHVATLIHDDV--VDNAVLRRGNPSVMA 106

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++    A++ G+ +L+ A +       + K+    Q++  L  N+  +G L  Q++    
Sbjct: 107 KFGNQAAVLLGDYILSKAIK----QGIETKNFAILQVLTHLAQNLC-EGELT-QLIFSSK 160

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + IDE   F I + KT  L     + GA+  +A   + + L+  GE LGI FQ+ DDLLD
Sbjct: 161 KIIDENHYFEIIRKKTAILFSVCSKIGALSVNADVKKNKTLQLIGEYLGICFQIRDDLLD 220


>gi|307701352|ref|ZP_07638373.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
 gi|307613513|gb|EFN92761.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
          Length = 339

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 31/236 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  KL E  +R++  L +   +TA+   T+    ++S +R A  GGK++R  LV   + 
Sbjct: 10  ALEEKLTEALERVEARLVEET-RTAAENTTE----IVSHLRAA--GGKRMRPLLVLLISQ 62

Query: 64  LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           L        +       G A+E  H  SL HDDL  MD+  +RRG    H++++   A++
Sbjct: 63  LGKAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAVM 120

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFID 173
           AG+ +   A  I+S    +L  +          H    Q +  GQM DI      D+ ID
Sbjct: 121 AGDLIFARASLIVSDFGRKLMKH----------HARTFQRLCLGQMHDILGPGATDDPID 170

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                 + + KTG+L+  A   GA ++  S      +  FGE+LG+ FQ+ADD+LD
Sbjct: 171 --FYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLD 224


>gi|314936397|ref|ZP_07843744.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655016|gb|EFS18761.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           hominis subsp. hominis C80]
          Length = 318

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 19/201 (9%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91
           ND +L    + LL  GGK++R   V   +S F    +T     V  A+E IH  +L+HDD
Sbjct: 24  NDSVLQEAAFHLLSSGGKRVRPAFVL-LSSQFGPKKITEDTYHVAVALELIHMATLVHDD 82

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RRGK T+  ++D  TAI+ GN LL    + +S  +      I S  ++ + 
Sbjct: 83  V--IDKSDKRRGKLTIEKKWDITTAILTGNFLLALGLKQLSKIEDHRVHTIISNAIVDVC 140

Query: 152 HNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                     G++   QD+F      T        KT  L+  + E GAI + A      
Sbjct: 141 R---------GELFQFQDQFNSHQNITNYLRRINRKTALLIQLSTEVGAITSQADNETIR 191

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           +L+  G  +G+ FQ+ DD+LD
Sbjct: 192 KLKMIGHYIGMSFQIVDDILD 212


>gi|118497514|ref|YP_898564.1| octaprenyl diphosphate synthase [Francisella tularensis subsp.
           novicida U112]
 gi|195536208|ref|ZP_03079215.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           novicida FTE]
 gi|118423420|gb|ABK89810.1| octaprenyl diphosphate synthase [Francisella novicida U112]
 gi|194372685|gb|EDX27396.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 325

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q   N ++ +R +G  LG  FQ+A
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|110668786|ref|YP_658597.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
           dimethylallyltransferase / geranyltranstransferase /
           farnesytranstransferase) [Haloquadratum walsbyi DSM
           16790]
 gi|109626533|emb|CAJ52996.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase
           (probable dimethylallyltransferase / probable
           geranyltranstransferase / probable
           farnesytranstransferase) [Haloquadratum walsbyi DSM
           16790]
          Length = 348

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 28/217 (12%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTA---------------LRVG 76
           Q  +RL  A RY L  GGK++R  +    A SL +V+ LTA               +   
Sbjct: 32  QSPERLYEATRYLLEAGGKRLRPTVALLTAESLADVDPLTADYRSFPALDGSEVDVMSAA 91

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            +IE I  ++LIH     MD+  +RRG P VH +YD  TAI+AG+ L   AFE++S+   
Sbjct: 92  TSIEVIQSFTLIH--DDIMDDDDLRRGVPAVHREYDTETAILAGDTLYAKAFELLSNTGA 149

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFA 192
              + + +   L+ T       +  GQ LD++    D  + E  + M++ +KT  L   A
Sbjct: 150 DPANGVAAVSRLATT----CTQICEGQALDVEFEHRDAVLPEEYLEMVE-LKTAVLYGAA 204

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             + A++  A  +  + L  +G + G  FQ+ DD+LD
Sbjct: 205 TSTTALLLDADADVVDALYQYGIDAGRAFQIQDDVLD 241


>gi|213971072|ref|ZP_03399192.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           T1]
 gi|301384205|ref|ZP_07232623.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060871|ref|ZP_07252412.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           K40]
 gi|302132864|ref|ZP_07258854.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213924180|gb|EEB57755.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           T1]
 gi|331018359|gb|EGH98415.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 322

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMKILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +  AS+ + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|237801840|ref|ZP_04590301.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024698|gb|EGI04754.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 319

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMKILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +  AS+ + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|182412394|ref|YP_001817460.1| polyprenyl synthetase [Opitutus terrae PB90-1]
 gi|177839608|gb|ACB73860.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
          Length = 306

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 88/182 (48%), Gaps = 2/182 (1%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R+ LV   A     +   A ++  AIE  H  SL+ DDLP MDN   RRG+P VH 
Sbjct: 43  GKLVRAQLVLIGAEQHGWSAAAAEQLACAIEFFHVASLVLDDLPCMDNAETRRGQPCVHR 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++ + TAI+A   L+  A+ +      +    +R   +  L   +G  G++GGQ  D+  
Sbjct: 103 RHGDATAILAALALINRAYALAGEAFLRAPRTVRRAAVTCLHRALGHAGLVGGQAWDLAF 162

Query: 170 EFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              D +   V  I   KTGAL        A+ A AS  E+  LR      G+ FQ ADDL
Sbjct: 163 ARTDRSSRTVAKIAAAKTGALFELTVLLPALAAPASGVERRWLRALCVYWGLQFQAADDL 222

Query: 228 LD 229
            D
Sbjct: 223 RD 224


>gi|225791079|gb|ACO31283.1| PtmT4 [Streptomyces platensis]
          Length = 348

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 12/188 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR+ L    A     +   A+   AA+E +H +SL+HDD+  MD    RRG+PTV 
Sbjct: 64  GGKMIRAALTILAAEACGGDARQAVPGAAAVELVHNFSLLHDDV--MDRDLERRGRPTVW 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    AI+AG+ LL  A  +            ++ +         +  +  GQM D+ 
Sbjct: 122 SKFGTPAAILAGDILLARACGMFDEASGHQGWATKALI-------DAIAELAAGQMADLA 174

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +   +   + + KT AL+  AC  GA +  A      R   FG +LG+ FQL D
Sbjct: 175 LERRATVTLEEALTVSEQKTAALLRCACTLGAGLVGAPDGTSRRFGAFGMHLGMAFQLVD 234

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 235 DVLGIWGD 242


>gi|254448914|ref|ZP_05062369.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015]
 gi|198261451|gb|EDY85741.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015]
          Length = 322

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          L++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPQLAVLAARAAGYQGEDHLQIAAIIEFIHTATLLHDDV--VDASELRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L + +FE++        D++R   +LS   N+  +G +  Q+L+I 
Sbjct: 101 AVFGNEAAVLVGDFLYSRSFEMMVEL-----DSMRIMSILSRATNVIAEGEVM-QLLNIH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   +   KT  L   A   GA+++   Q +++ L  +G +LG  FQL DD+L
Sbjct: 155 DADTTEARYLEVIHSKTAKLFEAATRIGAVLSGLPQEKEQALADYGMHLGTAFQLIDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|319400819|gb|EFV89038.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           epidermidis FRI909]
          Length = 319

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 20/202 (9%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90
           +D+ L    + LL  GGK++R   V   +  F  N+ T+    RV  A+E IH  +L+HD
Sbjct: 24  SDQTLQDASFHLLSSGGKRVRPAFVI-LSGQFGSNNKTSEDTYRVAVALELIHMATLVHD 82

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +D    RRG+ T+  ++D+ TAI+ GN LL    + +S           S   +  
Sbjct: 83  DV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEI---------SDTRVHT 131

Query: 151 THNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEK 207
           T +  +  +  G++   QD+F  ++T    ++++  KT  L+  + + GAI ++AS +  
Sbjct: 132 TISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVI 191

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
            +L+  G  +G+ FQ+ DD+LD
Sbjct: 192 RKLKMIGHYIGMSFQIIDDVLD 213


>gi|318057825|ref|ZP_07976548.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
 gi|318080208|ref|ZP_07987540.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
          Length = 306

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  +
Sbjct: 21  LAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDS 78

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML- 165
            + ++D   A++ G+ L + A +I++    +    +R Q           + ++ GQ+L 
Sbjct: 79  ANARWDNSVAVLTGDFLFSRASQILAGLGPE---AVRIQAE-------AFERLVTGQILE 128

Query: 166 --------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                   D  D ++D      +   KTG+L+  A   GA+M+ A     E L  +GE L
Sbjct: 129 TAGPRDGRDPVDHYLD------VLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERL 182

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQLADD+LD   D
Sbjct: 183 GVAFQLADDVLDIASD 198


>gi|311030284|ref|ZP_07708374.1| heptaprenyl diphosphate synthase component II [Bacillus sp. m3-13]
          Length = 320

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A L   +      V  A+E +H  SL+HDD+  +D+  +RRGK T+ 
Sbjct: 43  GGKRIRPVFVLLAAKLGAYDIHKVKNVAVALELMHMASLVHDDV--IDDAELRRGKSTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +   + E++    T+++D I +  +LS T    L  +  G++  I+
Sbjct: 101 AKWDNRIAMYTGDYIFARSLEMM----TKVED-IEAHRILSNT----LVELCKGEIEQIR 151

Query: 169 DEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  D+     ++  K KT  L+  +C+ GAI +    +  + L  FG  +G+ FQ+ D
Sbjct: 152 DKYNYDQNLRTYLRRIKRKTAILIAVSCQLGAITSGVPASVHQSLYWFGYYVGMSFQITD 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    EE L K
Sbjct: 212 DILDFTSTEEQLGK 225


>gi|254427749|ref|ZP_05041456.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
 gi|196193918|gb|EDX88877.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
          Length = 323

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 9/186 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +   CA          + V A IE +H  +L+HDD+  +D   +RRG+PTV+
Sbjct: 43  GGKRLRPLIAILCARAAGYQGDRHVDVAAIIEFLHTATLLHDDV--VDESNLRRGRPTVN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L++ A +++ + +     +I SQ   +++    L      Q+++++
Sbjct: 101 AVWGNAASVLVGDFLISRALQLMVALRHPRLLDIFSQSTNTISEGEVL------QLINVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDL 227
           D    E     +   KT  +   A E+GA++ A    +  +    +G +LGI FQL DD+
Sbjct: 155 DPNTSEENYMRVIHHKTAKMFESAAETGAVLGADEVSDHVDAFATYGRHLGIAFQLIDDV 214

Query: 228 LDCEED 233
           LD + D
Sbjct: 215 LDYQGD 220


>gi|282858641|ref|ZP_06267799.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
 gi|282588559|gb|EFB93706.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
          Length = 326

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 10/197 (5%)

Query: 35  HNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H+D LLS + + +   GGK++R  L+   A  F             +E +H  SLIHDD+
Sbjct: 28  HDDGLLSQVLHHIKQRGGKRMRPILILLIAKNFGQISSVTQHAAVGLELLHTASLIHDDV 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG+ +V+  Y+   A++ G+ +L+ A   +S     L     ++L  +L+ 
Sbjct: 88  --VDESSQRRGQASVNASYNNKVAVLVGDYVLSTALLQVSYTNANLIVRYLAELGQTLSD 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              LQ      + +IQ E I E     I   KT  L       GA  A AS+++    R 
Sbjct: 146 GEILQ------LSNIQREQITEEAYLQIIARKTAILFEICAAIGAESAGASKDDVALARA 199

Query: 213 FGENLGIIFQLADDLLD 229
           FG++LG+IFQ+ DD+ D
Sbjct: 200 FGKDLGMIFQIRDDIFD 216


>gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040432|gb|ACT57228.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 322

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 11/190 (5%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
            ++Y +  GGK++R  L    A +        + +  AIE IH  +L+HDD+  +D+  +
Sbjct: 33  VVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--VDDSAL 90

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGM 159
           RRGK    + +   T+++ G+ LL+ AF ++   K+Q  + + +  +++ T   G L+ +
Sbjct: 91  RRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQ--EALEALSLVACTLAEGELRQL 148

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              + LD+ +E         + K KT  L   A E  +++A    + ++ L+ +G NLGI
Sbjct: 149 SLSKNLDVTEE-----DYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGMNLGI 203

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 204 AFQLVDDVLD 213


>gi|302524796|ref|ZP_07277138.1| farnesyl diphosphate synthase [Streptomyces sp. AA4]
 gi|302433691|gb|EFL05507.1| farnesyl diphosphate synthase [Streptomyces sp. AA4]
          Length = 340

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 15/181 (8%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K +R  LV  CA     +   A+    A+E  H +SL+HDD+  MD    RR +PT    
Sbjct: 63  KALRPALVLLCAEACGGDPEDAVPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAWTV 120

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +    A++AG+ LL  AF+++S+      D   +  +LS      +  +L GQ  D+  E
Sbjct: 121 FGTGQAVLAGDSLLALAFDVLSA------DGPAAARLLS----TAVLDLLHGQHEDLAFE 170

Query: 171 FIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              + +V    +M   KT AL+  AC  G ++        ER   FG +LG+ FQ  DDL
Sbjct: 171 QRTDVEVAECVRMAQGKTAALLSAACTLGVLVVGGRGEHVERFGRFGRSLGLAFQHVDDL 230

Query: 228 L 228
           L
Sbjct: 231 L 231


>gi|212638936|ref|YP_002315456.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
           WK1]
 gi|212560416|gb|ACJ33471.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
           WK1]
          Length = 320

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 18/205 (8%)

Query: 31  MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSL 87
           +  Q +D L++     LL  GGK+IR   V      F   H   + RV  A+E IH  SL
Sbjct: 23  LTVQASDPLVNEASLHLLEAGGKRIRPVFVL-LGGQFGTYHFEKMKRVAVALELIHMASL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T+  ++ +  A+  G+ L   A E +      +   I +  +
Sbjct: 82  VHDDV--IDGAMLRRGKETIQAKWGDRFAMYVGDYLFARALEQMCEIDDPVAHRILANTI 139

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQ 204
           + +           G++  I D++  D+     +Q  K KT  L+  +C+ GA++A A +
Sbjct: 140 VEVCR---------GEIEQISDKYRFDQNLRRYLQRIKRKTALLIAASCQLGAVVAGAPE 190

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
              ++L  FG  +G+ FQ+ DD+LD
Sbjct: 191 TIHKKLYWFGYYVGMSFQITDDILD 215


>gi|163841369|ref|YP_001625774.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC
           33209]
 gi|162954845|gb|ABY24360.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC
           33209]
          Length = 375

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 19/187 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A L + +    +R    +E  H  +L HDD+  MD+   RRG PT H
Sbjct: 94  GGKRIRPLLVLLAAHLGDSSRPEVIRAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 151

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
             +    AI+ G+ +   A  ++S   P+  L    R+   L L           GQ+ +
Sbjct: 152 EVWGNSVAILTGDLIFARASILVSELGPRA-LGIQARTFERLCL-----------GQLHE 199

Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                 DE  V     +   KTG+L+  + + GAI A   +  ++ L  +GE +G+ FQL
Sbjct: 200 TVGPRPDEDPVDHYISVVSDKTGSLVSASGQLGAIFAEVPEPIQDVLVEYGEKVGVAFQL 259

Query: 224 ADDLLDC 230
           ADD++D 
Sbjct: 260 ADDVIDV 266


>gi|333025098|ref|ZP_08453162.1| putative heptaprenyl diphosphate synthase component II
           [Streptomyces sp. Tu6071]
 gi|332744950|gb|EGJ75391.1| putative heptaprenyl diphosphate synthase component II
           [Streptomyces sp. Tu6071]
          Length = 326

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  +
Sbjct: 41  LAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDS 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML- 165
            + ++D   A++ G+ L + A +I++    +    +R Q           + ++ GQ+L 
Sbjct: 99  ANARWDNSVAVLTGDFLFSRASQILAGLGPE---AVRIQAE-------AFERLVTGQILE 148

Query: 166 --------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                   D  D ++D      +   KTG+L+  A   GA+M+ A     E L  +GE L
Sbjct: 149 TAGPRDGRDPVDHYLD------VLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERL 202

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQLADD+LD   D
Sbjct: 203 GVAFQLADDVLDIASD 218


>gi|302521213|ref|ZP_07273555.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
           SPB78]
 gi|302430108|gb|EFL01924.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
           SPB78]
          Length = 336

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 27/196 (13%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  +
Sbjct: 51  LAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDS 108

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML- 165
            + ++D   A++ G+ L + A +I++    +    +R Q           + ++ GQ+L 
Sbjct: 109 ANARWDNSVAVLTGDFLFSRASQILAGLGPE---AVRIQAE-------AFERLVTGQILE 158

Query: 166 --------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                   D  D ++D      +   KTG+L+  A   GA+M+ A     E L  +GE L
Sbjct: 159 TAGPRDGRDPVDHYLD------VLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERL 212

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQLADD+LD   D
Sbjct: 213 GVAFQLADDVLDIASD 228


>gi|157736647|ref|YP_001489330.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018]
 gi|157698501|gb|ABV66661.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018]
          Length = 299

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 36/197 (18%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L  GK +RS L+ + A +    +  ++++ A +E IH  SL+HDD+  +D    RRG+P+
Sbjct: 30  LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDV--IDEADTRRGQPS 83

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQML 165
           V+  YD  T+I+ G+ L + AF  +S    ++  +I + + +LS+           G+M+
Sbjct: 84  VNALYDNKTSIMFGDILYSRAFTELSQMDKRVAYHISNAVTLLSI-----------GEMM 132

Query: 166 DIQDEFIDETQVF---------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           D+     D TQ F         MI K KT +L+  +  S AI+ +  +   E+   +G+N
Sbjct: 133 DV-----DLTQSFNTSYTKYLDMIYK-KTASLIEASARSAAILVNLDE---EKYATYGKN 183

Query: 217 LGIIFQLADDLLDCEED 233
           LG+ FQ+ DD+LD  +D
Sbjct: 184 LGLAFQMIDDILDITQD 200


>gi|259486315|tpe|CBF84055.1| TPA: hexaprenyl pyrophosphate synthetase Coq1, putative
           (AFU_orthologue; AFUA_3G06120) [Aspergillus nidulans
           FGSC A4]
          Length = 456

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 90/162 (55%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + +I++    A++AG+ LL  A   ++ 
Sbjct: 198 RLAEITELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALA- 254

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187
              +L+D   ++L+ ++  N+ ++G         +DE    F D+T  + +QK  +KT +
Sbjct: 255 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTAS 310

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H++ +  E    +G NLG+ FQL DD+LD
Sbjct: 311 LISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLD 352


>gi|297537721|ref|YP_003673490.1| trans-hexaprenyltranstransferase [Methylotenera sp. 301]
 gi|297257068|gb|ADI28913.1| Trans-hexaprenyltranstransferase [Methylotenera sp. 301]
          Length = 332

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV     LF        ++ A +E IH  +L+HDD+  +D    RRG+ T +
Sbjct: 53  GGKRLRPILVLLSGGLFGEVKPEHHQLAAVVEFIHTATLLHDDV--VDESSKRRGQNTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + + AF+++ + +     N+R   +LS   N+  +G +  Q+L+I 
Sbjct: 111 AIFGNAASVLVGDFVYSRAFQMMVAVQ-----NMRVMEVLSNATNVIAEGEVL-QLLNIH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + +     +   KT  L   A   GAI+++AS +++E L  +G ++G  FQL DD+L
Sbjct: 165 NADVTDGAYLQVIHYKTAKLFEAATRLGAIISNASPSDEEALSQYGMHIGTAFQLIDDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|291191909|gb|ADD83016.1| PtnT4 [Streptomyces platensis]
          Length = 348

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 12/188 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR+ L    A     +   A+   AA+E +H +SL+HDD+  MD+   RRG+PTV 
Sbjct: 64  GGKMIRAALTILAAEACGGDAQQAVPGAAAVELVHNFSLLHDDV--MDHDLERRGRPTVW 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    AI+AG+ LL  A  +            ++ +         +  +  GQM D+ 
Sbjct: 122 SKFGTPAAILAGDILLARACGMFDEASGHQGWATKALI-------DAIAELAAGQMADLA 174

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +   +   + + KT AL+  AC  GA +  A      R   FG +LG+ FQL D
Sbjct: 175 LERRATVTLEEALTVSEQKTAALLRCACTLGAGLVGAPDATSRRFGAFGMHLGMAFQLVD 234

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 235 DVLGIWGD 242


>gi|170740966|ref|YP_001769621.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
 gi|168195240|gb|ACA17187.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
          Length = 345

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 116/242 (47%), Gaps = 24/242 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQ---------TQHNDRLLSAIRYALL--GGKK 52
           G+   L++ S   +  L+DL+   AS M+         T  +  ++  +   L+  GGK+
Sbjct: 2   GVVIPLEDTSSDPEASLNDLVALVASGMERVNAMILSRTGSDVAMIPEVANHLIASGGKR 61

Query: 53  IRSFLVTECASLFNVNHLTALRVG-----AAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           +R  L    A L       A R G     A++E +H  +L+HDD+  +D   +RRG+   
Sbjct: 62  LRPILTLATAQLCGYRAGEAGRDGDVKLAASVEFMHTATLLHDDV--VDESDMRRGRVAA 119

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF+++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 120 RIKWGNQASVLVGDFLLGQAFKMMVEVGS-----LRALDILSSAAAVIAEGEVM-QLGAA 173

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E    R +G NLG+ FQL DD 
Sbjct: 174 KNTETTEDEYLAVIRAKTAELFAAACEVGPVLAERPKSEAAACRSYGMNLGVAFQLIDDA 233

Query: 228 LD 229
           LD
Sbjct: 234 LD 235


>gi|152998234|ref|YP_001343069.1| polyprenyl synthetase [Marinomonas sp. MWYL1]
 gi|150839158|gb|ABR73134.1| Polyprenyl synthetase [Marinomonas sp. MWYL1]
          Length = 326

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 14/197 (7%)

Query: 39  LLSAIRYALL--GGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           L+  I Y ++  GGK++R  LV       A L       A+++   IE IH  +L+HDD+
Sbjct: 31  LIEQIGYYIISNGGKRLRPLLVLLAAKASAELDKPKLDQAIQMATIIEFIHTSTLLHDDV 90

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T + ++    +++ G+ L + AF+I+    +     ++   +L+ T 
Sbjct: 91  --VDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQIMVDVGS-----MQCMSVLAKTT 143

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           NI  +G +  Q+++  D    E     + + KT  L   A   GA++A AS+  +E LR 
Sbjct: 144 NIIAEGEVQ-QLINCGDPDTTEESYLKVIQYKTAKLFEGAALCGAVIAGASKEHQEALRQ 202

Query: 213 FGENLGIIFQLADDLLD 229
           FG  +G  FQL DD++D
Sbjct: 203 FGMYVGTAFQLIDDVMD 219


>gi|89070187|ref|ZP_01157515.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
 gi|89044203|gb|EAR50354.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
          Length = 332

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            MQ++H  R+     + +  GGK++R  L    A L   +    + + A +E IH  +L+
Sbjct: 32  RMQSEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARLCGYDGPYHVHLAATVEFIHTATLL 91

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F ++          I SQ   
Sbjct: 92  HDDV--VDESAQRRGRPTANLLWDNQSSVLVGDYLFAKSFLLMVDTGNLDVLRILSQASA 149

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           ++     LQ +   + L       DE     + + KT AL   A E G ++A        
Sbjct: 150 TIAEGEVLQ-LTASRSL-----ATDEAVYMKVIRGKTAALFSAATEVGGVIAGQGPEVCR 203

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
            L  +G+ LGI FQ+ DDLLD E
Sbjct: 204 ALFDYGDALGIAFQIVDDLLDYE 226


>gi|282890377|ref|ZP_06298905.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499759|gb|EFB42050.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 297

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 12/208 (5%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++  A  YAL  GGK+ R  LV   A         A     A+E  H  SLI DDLP MD
Sbjct: 30  KVRDACEYALRNGGKRFRPALVLMVAKTLG-KQADASEAALAVEFFHTASLIADDLPCMD 88

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK----------DNIRSQL 146
           N   RR  P++H  + E  A++A   L+   +  ++     LK          D++    
Sbjct: 89  NDDERRNMPSLHKVFGEDIALLASYALIAEGYRYLAQNSETLKQQQVSFSDRCDHLCVLA 148

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           + ++++N GL G  GGQ LDI +  +  + +  I   KT +L   +   G +       +
Sbjct: 149 IQNVSYNTGLFGATGGQFLDIHESNLSLSALRDILHKKTVSLFEISFVLGWLFGGGELEK 208

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDL 234
              ++    + G+ FQ+ADDL D ++DL
Sbjct: 209 LPLVKKAASHFGMAFQIADDLSDMQQDL 236


>gi|126733996|ref|ZP_01749743.1| Farnesyltranstransferase [Roseobacter sp. CCS2]
 gi|126716862|gb|EBA13726.1| Farnesyltranstransferase [Roseobacter sp. CCS2]
          Length = 332

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A +   +    + + A +E IH  +L+H
Sbjct: 33  MASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 93  DDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDILANAAAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   +D ++       + + KT AL   A E G  +A      K+ 
Sbjct: 151 IAEGEVLQLTAASDLATTEDIYL------QVVRGKTAALFSAAMEVGGEIADQDAATKQA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LFDYGDALGISFQIVDDLLD 224


>gi|121610836|ref|YP_998643.1| dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2]
 gi|121555476|gb|ABM59625.1| Dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2]
          Length = 342

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+              L + A +E IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 63  GGKRLRPALLLMVCGALGYGGAHRLSLAAVVELIHTATLLHDDV--VDASTLRRGRPTAN 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ L T +F+ +         N+R   +L+   N+  +G +  Q++++ 
Sbjct: 121 EIFGAPACVLVGDFLHTRSFQTMVE-----TGNMRVMEILAEATNVIAEGEVL-QLMNMH 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   +   GA++A +S + ++    +G+ LG  FQ+ DD+L
Sbjct: 175 DATLDEAGYLRVIRSKTAKLFEASARLGAVLARSSPDIEQACATYGQALGTAFQIIDDVL 234

Query: 229 DCEED 233
           D + D
Sbjct: 235 DYDGD 239


>gi|332981368|ref|YP_004462809.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
 gi|332699046|gb|AEE95987.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
          Length = 282

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 133/232 (57%), Gaps = 18/232 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L+   + ID  LD++L    ++    H      A+RY++  GGK++R  L+     LF+
Sbjct: 6   QLKHKIEIIDKNLDNMLPPADTYPPVIH-----EAMRYSVFSGGKRLRPVLLISAYELFD 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    + +  AIE IH YSLIHDDLP+MD+   RRGK T H  + E  A++ G+ LL +
Sbjct: 61  EHVDDCMPLACAIEFIHTYSLIHDDLPAMDDDDTRRGKATCHKVFGEGIAVLTGDALLNH 120

Query: 127 AFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180
           AFE++      L D  R+       +++    G+ GM+GGQ++D+  +++ +D+  +  I
Sbjct: 121 AFEVM------LDDIARNPHHIAAAIAIAKAAGIGGMIGGQVMDLLYENKPVDDGVLQYI 174

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + KT AL+C A ++GA+ A A +     +  +G  LG+ FQ++DD+LD +E
Sbjct: 175 HQHKTAALICAAVKAGALAAGADEVYVRAIEQYGLALGMAFQISDDILDVDE 226


>gi|90020654|ref|YP_526481.1| phage tail region protein [Saccharophagus degradans 2-40]
 gi|89950254|gb|ABD80269.1| Trans-hexaprenyltranstransferase [Saccharophagus degradans 2-40]
          Length = 320

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 12/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A     N    L + A IE IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 41  GGKRLRPLLVLLTARALGYNGNQHLSLSAIIEFIHTATLLHDDV--VDVSALRRGRPTAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
             +    +++ G+ L + AF+++        +K+       L+ T N+  +G +  Q+++
Sbjct: 99  ANWGNAPSVLVGDFLYSRAFQMMVEIGEMGIMKE-------LANTTNVISEGEVQ-QLVN 150

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++  + E     +   KT AL   ACE+ AI+A A     + +R +G +LG+ FQL DD
Sbjct: 151 ARNPEVTEQNYMTVIHKKTAALFEAACETAAILAGADAATCKAVRSYGYHLGVAFQLVDD 210

Query: 227 LLDCEED 233
           +LD + D
Sbjct: 211 VLDYQGD 217


>gi|223940506|ref|ZP_03632355.1| Polyprenyl synthetase [bacterium Ellin514]
 gi|223890830|gb|EEF57342.1| Polyprenyl synthetase [bacterium Ellin514]
          Length = 350

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 24/239 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYALLG-GKKIRSF 56
           + G    +     K I   ++  L   A  ++ Q    +  ++    YAL G GK++R  
Sbjct: 13  VTGASQKETHATWKHIAEPVEPFLEAVAQRLEKQVREFDPAIVPYAEYALTGQGKQLRPA 72

Query: 57  LVTECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           LV   A+     N +H+T   +   IE +H  +L+HDD+  MD   IRRG+ T+   +  
Sbjct: 73  LVALSANASGTLNDSHVT---IAVIIEMVHLATLVHDDV--MDEAEIRRGRLTLAANWGN 127

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-- 171
             A++ G+ L  +A ++ +S  T   +  R+  M + T       +  G++L  Q     
Sbjct: 128 EIAVLFGDCLFAHALKLAASFPT--PEICRAVAMATNT-------VCSGEILQTQQRRNF 178

Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              + + F + +MKT  L   +C+ GA +  A   ++  LR FG  LG  +QL DD LD
Sbjct: 179 QFSQPEYFKVLEMKTAELFALSCDLGACLTGAPAVQRNGLRQFGMALGTAYQLYDDCLD 237


>gi|315505424|ref|YP_004084311.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315412043|gb|ADU10160.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 339

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 24/233 (10%)

Query: 12  NSKRIDTILDDLLLQTASHM--------QTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            S R    +DDL    +  +          +  D+L + +RYALL  GK +R  +    A
Sbjct: 5   GSTRYPPFIDDLARSESGRLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L      E +H  +L+HDD+  +D   +RRG+P V + Y    AI+AG+ 
Sbjct: 65  EAVGGSPRDVLAAALGTEYLHVATLVHDDI--IDADTLRRGRPAVPVAYSIPGAIVAGDH 122

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLML------SLTHNIGLQGMLGGQMLDIQDEFIDET 175
           L+ +AF+ ++ S +     ++ S +         L     L+  L G  LD    +  E 
Sbjct: 123 LIFHAFQAMVESGRAVPAASVVSAVTALAEAGQDLCRGQALEARLVGD-LDAGARWYPE- 180

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              MI ++KTG+L    C  GA++  A       L  +GE++G  FQ+ DDLL
Sbjct: 181 ---MI-RLKTGSLFRAVCHIGALLGGADPLVASALARYGEHVGTAFQIRDDLL 229


>gi|91773215|ref|YP_565907.1| polyprenyl synthetase [Methanococcoides burtonii DSM 6242]
 gi|91712230|gb|ABE52157.1| geranylgeranyl pyrophosphate synthetase [Methanococcoides burtonii
           DSM 6242]
          Length = 300

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 18/193 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKK+R  ++   + +             AIE IH  SLIHDD+  +D G +RRG  + H
Sbjct: 40  GGKKVRPIILLLASRICGKGSENCTNAALAIELIHSASLIHDDI--LDEGVMRRGVESAH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--MLGGQMLD 166
            ++    A++AG+ +++ + E+IS   T             +    G  G  M  G+ +D
Sbjct: 98  KKFGPAAAMLAGDYMISKSIELISIYST------------PVVQEFGRAGMAMAEGETID 145

Query: 167 IQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           I+   E   E   F     KT +L   +   GA +A A +    +L+ +G  LG  +Q+ 
Sbjct: 146 IKSTSEDFAEMNYFDCIDKKTASLFAASAVMGAYIAGADEKTASKLKNYGRKLGRAYQIV 205

Query: 225 DDLLDCEEDLPKK 237
           DDLL+  +++  K
Sbjct: 206 DDLLEYTQNIDNK 218


>gi|315635812|ref|ZP_07891074.1| polyprenyl synthetase [Arcobacter butzleri JV22]
 gi|315479791|gb|EFU70462.1| polyprenyl synthetase [Arcobacter butzleri JV22]
          Length = 299

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 36/197 (18%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L  GK +RS L+ + A +    +  ++++ A +E IH  SL+HDD+  +D    RRG+P+
Sbjct: 30  LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDV--IDEADTRRGQPS 83

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQML 165
           V+  YD  T+I+ G+ L + AF  +S    ++  +I + + +LS+           G+M+
Sbjct: 84  VNALYDNKTSIMFGDILYSRAFTELSQMDKRVAYHISNAVTLLSI-----------GEMM 132

Query: 166 DIQDEFIDETQVF---------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           D+     D TQ F         MI K KT +L+  +  S AI+ +  +   E+   +G+N
Sbjct: 133 DV-----DLTQSFNTSYTKYLDMIYK-KTASLIEASARSAAILVNLDE---EKYATYGKN 183

Query: 217 LGIIFQLADDLLDCEED 233
           LG+ FQ+ DD+LD  +D
Sbjct: 184 LGLAFQMIDDILDITQD 200


>gi|316935308|ref|YP_004110290.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
 gi|315603022|gb|ADU45557.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
          Length = 288

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 20/193 (10%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RL +A+R A+   G ++R  L    A +    N       GAA+E +HC SLIHDDLP  
Sbjct: 26  RLAAAMRGAVFPRGARVRPRLCHSVALACGEDNPGITEAAGAALELMHCASLIHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRG+P+VH  + E  A++AG+ ++  AF+ I+      + +  +  +L LT  IG
Sbjct: 86  DGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIA------RVDGPADRLLKLTQIIG 139

Query: 156 LQ-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G++ GQ  + + E      +    + KTGAL   A       A ++ ++ E  
Sbjct: 140 SAVGVPFGIVAGQAWECESEI----NLAHYHRSKTGALFVAATAM---GAASAGSDPEPW 192

Query: 211 RCFGENLGIIFQL 223
           R  GE +G  +Q+
Sbjct: 193 RMVGEKIGEAYQV 205


>gi|328906289|gb|EGG26064.1| heptaprenyl diphosphate synthase component II [Propionibacterium
           sp. P08]
          Length = 324

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 14/185 (7%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV  C+      +    +R    +E  H  SL HDD+  MD    RRG P+ 
Sbjct: 46  GGKRFRPLLVVLCSQFGHEADEADLVRAAVVVELTHVASLYHDDV--MDEASKRRGAPSA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++++    AI+ G+    Y F   S    +L  D +R Q   + T +  +QG +      
Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVRLQ---ARTFSRLVQGQIAETRGP 156

Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            Q E  D    ++ +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLAD
Sbjct: 157 SQGE--DPLAHYLKVVADKTGSLIATSAVFGAMVSHASAENVTALEQFGEDIGEVFQLAD 214

Query: 226 DLLDC 230
           DL+D 
Sbjct: 215 DLIDV 219


>gi|16079331|ref|NP_390155.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|399776|sp|P31114|HEPS2_BACSU RecName: Full=Heptaprenyl diphosphate synthase component 2;
           Short=HEPPP synthase subunit 2; AltName: Full=Spore
           germination protein C3
 gi|143803|gb|AAA20856.1| GerC3 [Bacillus subtilis]
 gi|2634692|emb|CAB14190.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|124494285|gb|ABN13180.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|124494305|gb|ABN13199.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494385|gb|ABN13275.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494445|gb|ABN13332.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. SMY]
          Length = 348

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V   +E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 71  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 126

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +L  + E+++         I SQ ++ +           G++  
Sbjct: 127 IKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQ 177

Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+
Sbjct: 178 IKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 237

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 238 IDDILDFTSTEEELGK 253


>gi|118580423|ref|YP_901673.1| trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379]
 gi|118503133|gb|ABK99615.1| Trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379]
          Length = 322

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A L +     A+ + + IE IH  +L+HDD+  +D+  +RRG  + +
Sbjct: 41  GGKRVRPALLLLAARLCDYQGDKAVPLASVIEFIHTATLLHDDV--VDSATLRRGLASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++ +  +     + S     +     +Q +  G++   +
Sbjct: 99  TLWGNEASVLVGDFLFSKSFSLMVAVGSLDILKVLSDATTVIAEGEVMQLLCTGELELTE 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           + +ID      + + KT  LM  ACE+GAI+  A+   ++ L  FG NLGI FQL DD L
Sbjct: 159 ERYID------VVRSKTAILMSAACEAGAILGGAAPERRQALSDFGMNLGIAFQLMDDTL 212

Query: 229 D---CEEDLPK 236
           D    EE+  K
Sbjct: 213 DYIATEEEFGK 223


>gi|225174192|ref|ZP_03728191.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169977|gb|EEG78772.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 324

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V  C S +       + +  AIE IH  SL+HDD+  +D+   RRG PTV 
Sbjct: 45  GGKRLRPAMVLLCGSFYASPQTELVDMATAIELIHTASLVHDDV--IDHAASRRGHPTVS 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++ +  A++ G+ L   AF +++        + +  ++ ++T  I L  M  G++    
Sbjct: 103 AKWGDHQAVLYGDFLFARAFSLLTK-------HGQVGVLENMTRAISL--MCEGEIEQAA 153

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             F   + E         KT   +   C +GA        EK+ L  FG  LG  FQ+ D
Sbjct: 154 SRFNPNVTEADYISYIHKKTAYFISACCLAGAEACDMPPAEKKALATFGLQLGYAFQMID 213

Query: 226 DLLD 229
           DLLD
Sbjct: 214 DLLD 217


>gi|124494465|gb|ABN13351.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494485|gb|ABN13370.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494505|gb|ABN13389.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494525|gb|ABN13408.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
          Length = 348

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   + +F    +  ++ V   +E IH  SL+HDD+  +D+  +RRGKPT+
Sbjct: 71  GGKRIRPVFVL-LSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTI 127

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++D   A+  G+ +L  + E+++         I SQ ++ +           G++  I
Sbjct: 128 KAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQI 178

Query: 168 QDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+ 
Sbjct: 179 KDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQII 238

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE+L K
Sbjct: 239 DDILDFTSTEEELGK 253


>gi|323966367|gb|EGB61801.1| polyprenyl synthetase [Escherichia coli M863]
 gi|327251278|gb|EGE62967.1| polyprenyl synthetase family protein [Escherichia coli STEC_7v]
          Length = 323

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  S  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|229553018|ref|ZP_04441743.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
           LMS2-1]
 gi|229313640|gb|EEN79613.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
           LMS2-1]
          Length = 312

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L+   A     ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV 
Sbjct: 35  GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 92

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +     AI AG+ L    F+++S   P+T  L+ N R  +M  +      Q      ++
Sbjct: 93  AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 150

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + ++           KT AL   A  +GA + H S  +K+    FG  LG+ FQ+ D
Sbjct: 151 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMID 204

Query: 226 DLLDCEE 232
           DLLD  +
Sbjct: 205 DLLDYTQ 211


>gi|257056312|ref|YP_003134144.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
 gi|256586184|gb|ACU97317.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
          Length = 335

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 14/183 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A        +AL    A+E +H +SL+HDD+  MD    RR +PT  
Sbjct: 53  GGKALRPALALLAARAVGAPPESALPGAVAVELVHNFSLLHDDV--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LLT A E++ S    + +   +Q + +  H      ++ GQ  DI+
Sbjct: 111 RLFGTPAAILAGDALLTLAMEVLDS----VGERSANQRLAAAVHR-----LIEGQSADIE 161

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +   +   ++  KT +LM  + E GA++  A       L  FG NLG+ FQL D
Sbjct: 162 YESRTIVSVEECLDMEDGKTASLMACSAELGALLGGADDRTVAALGDFGRNLGMGFQLVD 221

Query: 226 DLL 228
           DLL
Sbjct: 222 DLL 224


>gi|52425655|ref|YP_088792.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307707|gb|AAU38207.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 358

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      +   A IE +H  +L+HDD+  +D   +RRG PT +
Sbjct: 78  GGKRIRPMIANLAAKALNYQDNKHITCAAFIEFLHTATLLHDDV--VDESDMRRGNPTAN 135

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T +F+++    T+L  ++R   ++S   N+  +G +  Q+++++
Sbjct: 136 AEFGNAASVLVGDYMHTRSFQMM----TELG-SLRILQVMSAATNVIAEGEVQ-QLMNVR 189

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + ++ AI+A A    +E L+ +G  LG  FQL DD+L
Sbjct: 190 DPDTTEQNYMKVIYSKTARLFEVSTQTVAILADAGAAIEEGLQNYGRYLGTAFQLVDDIL 249

Query: 229 D 229
           D
Sbjct: 250 D 250


>gi|85058340|ref|YP_454042.1| octaprenyl diphosphate synthase [Sodalis glossinidius str.
           'morsitans']
 gi|84778860|dbj|BAE73637.1| octaprenyl-diphosphate synthase [Sodalis glossinidius str.
           'morsitans']
          Length = 323

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALHYQGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF+++++ ++     +R   ++S   NI  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTALES-----LRVLELMSEAVNIIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I       +   KT  L   A +S AI+A A   ++  LR +G  LG  FQL DDLL
Sbjct: 155 DPDITIDNYMRVIYSKTARLFEAASQSSAILAGADACQEAALRDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYGAD 219


>gi|192290105|ref|YP_001990710.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192283854|gb|ACF00235.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 288

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 20/193 (10%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RL +A+R A+   G ++R  L    A +    N       GAA+E +HC SLIHDDLP  
Sbjct: 26  RLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGITEAAGAALELMHCASLIHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRG+P+VH  + E  A++AG+ ++  AF+ I+  +        +  +L LT  IG
Sbjct: 86  DGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIARAEGP------ADRLLKLTQIIG 139

Query: 156 LQ-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G++ GQ  + + E      +    + KTGAL   A       A ++ ++ E  
Sbjct: 140 GAVGVPFGIVAGQAWECETEI----NLAHYHRSKTGALFVAATAM---GAASAGSDPEPW 192

Query: 211 RCFGENLGIIFQL 223
           R  GE +G  +Q+
Sbjct: 193 RMVGEKIGEAYQV 205


>gi|300309704|ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1]
 gi|300072489|gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 309

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A+ F         + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 30  GGKRLRPVLVVLIANAFGYKGEHHHSLAAVIEFIHTATLLHDDV--VDESSLRRGKQTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ +       N R   +++   N+  +G +  Q+L++ 
Sbjct: 88  AMFGNAASVLVGDFLYSRAFQMMVA-----VGNPRVMEIVADATNVIAEGEVL-QLLNMH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +DE     + + KT  L   A + GA++A A +   E    +G ++G  FQL DD+L
Sbjct: 142 NPDVDENGYLQVIRSKTAKLFEAASQIGALIAGADEAGIEAAAEYGRSIGTAFQLIDDVL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|145632254|ref|ZP_01787989.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655]
 gi|144987161|gb|EDJ93691.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655]
          Length = 323

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    ET    +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSETNYMRVIYSKTARLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|258540369|ref|YP_003174868.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705]
 gi|257152045|emb|CAR91017.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705]
          Length = 322

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L+   A     ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV 
Sbjct: 45  GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +     AI AG+ L    F+++S   P+T  L+ N R  +M  +      Q      ++
Sbjct: 103 AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 160

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + ++           KT AL   A  +GA + H S  +K+    FG  LG+ FQ+ D
Sbjct: 161 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMID 214

Query: 226 DLLDCEE 232
           DLLD  +
Sbjct: 215 DLLDYTQ 221


>gi|313893153|ref|ZP_07826730.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442506|gb|EFR60921.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 323

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ L    A+         +R+  A+E +H  +LIHDD+  +D   IRRG+ T+H
Sbjct: 46  GGKRLRAQLCLLIANAGTSVERQRIRIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +      AI++G+ L   AF+I+S         I S ++  L           G+ + ++
Sbjct: 104 MHKGNKVAILSGDYLFAKAFQIVSEMPNMKYLQIFSHIITCLVE---------GEFMQME 154

Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + ID+  + +M +  K  A     C E G ++   S++E   L+ +G  LG+ FQ+ D
Sbjct: 155 DVYRIDQGIERYMTKTQKKTADFMEGCMELGGLLGGWSESEIVELKKYGHALGMAFQITD 214

Query: 226 DLLDCEE 232
           D++D  E
Sbjct: 215 DIMDYRE 221


>gi|124494325|gb|ABN13218.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494345|gb|ABN13237.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|124494365|gb|ABN13256.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494405|gb|ABN13294.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
          Length = 348

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   + +F    +  ++ V   +E IH  SL+HDD+  +D+  +RRGKPT+
Sbjct: 71  GGKRIRPVFVL-LSGMFGDYDINKIKYVAVTLEMIHMASLVHDDV--IDDAELRRGKPTI 127

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++D   A+  G+ +L  + E+++         I SQ ++ +           G++  I
Sbjct: 128 KAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQI 178

Query: 168 QDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+ 
Sbjct: 179 KDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQII 238

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE+L K
Sbjct: 239 DDILDFTSTEEELGK 253


>gi|227497907|ref|ZP_03928087.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis
           DSM 15434]
 gi|226832673|gb|EEH65056.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis
           DSM 15434]
          Length = 368

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 22/193 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  L    A L +    T  +V   G A+E  H  +L HDD+  MD+  +RRG P
Sbjct: 49  GGKRLRPVLTLLTAQLGDPQTATGEKVRDAGVAVELTHIATLYHDDV--MDDAPLRRGAP 106

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +    +    AI+ G+ L+  A +++++  P+              L H    + +  GQ
Sbjct: 107 SAQTVWGNSAAILTGDVLVARASQLVAALGPEA------------VLAHAKTFERLCMGQ 154

Query: 164 MLDIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           + +     +    V   IQ +  KTG+L+  +   GA++  A +  +  +  FGE +G+ 
Sbjct: 155 LHETLPRPVGTDPVAHYIQVLADKTGSLIAVSARYGAMLTEAGEETERIVEEFGEKIGVA 214

Query: 221 FQLADDLLDCEED 233
           FQLADD++D   D
Sbjct: 215 FQLADDVIDLTSD 227


>gi|226329701|ref|ZP_03805219.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198]
 gi|225202887|gb|EEG85241.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198]
          Length = 323

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +        +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLTGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTD-----LDSMRVLKLMSSATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI++ A+  +++  + +G  LG  FQL DDLL
Sbjct: 155 DPDISEDDYMQVIYSKTARLFEAASHASAILSGATPEQEKAFQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|67524619|ref|XP_660371.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4]
 gi|40744019|gb|EAA63201.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4]
          Length = 1092

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 90/162 (55%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + +I++    A++AG+ LL  A   ++ 
Sbjct: 827 RLAEITELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALA- 883

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187
              +L+D   ++L+ ++  N+ ++G         +DE    F D+T  + +QK  +KT +
Sbjct: 884 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTAS 939

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H++ +  E    +G NLG+ FQL DD+LD
Sbjct: 940 LISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLD 981


>gi|319760237|ref|YP_004124175.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318038951|gb|ADV33501.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 324

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 8/183 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIRS +V   A          + +   IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKKIRSSMVLLIAKSLTYKKNQHVIIATLIEFIHAATLLHDDV--VDTSEMRRGKITAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ + T AF++++  ++     +R   +++   NI  +G +  Q++   
Sbjct: 101 IMFGNAASVLVGDFIYTRAFQMMTELQS-----LRILSLMANAVNIIAEGEIM-QLIHCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I       I   KT  L   A ++ AI+A+A   +++ L  +G+ +GI FQL DD+L
Sbjct: 155 DPTITINHYMKIIYNKTARLFEVASQTSAILANADIKQEQALGNYGKYIGIAFQLIDDVL 214

Query: 229 DCE 231
           D +
Sbjct: 215 DYD 217


>gi|238022826|ref|ZP_04603252.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147]
 gi|237866029|gb|EEP67165.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147]
          Length = 324

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPILTILAGKCLGCDSDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     ++   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMAEATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I ET+   + + KT  L   A + GAI+A A+  +++ L+ +G ++G  FQ+ DD+L
Sbjct: 157 NTEISETEYLQVIQYKTAKLFEAAAQVGAILAGATSGQEQALKDYGAHIGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|221310190|ref|ZP_03592037.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221314513|ref|ZP_03596318.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221319435|ref|ZP_03600729.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221323711|ref|ZP_03605005.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|321311744|ref|YP_004204031.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           BSn5]
 gi|291484698|dbj|BAI85773.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. natto BEST195]
 gi|320018018|gb|ADV93004.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           BSn5]
          Length = 320

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V   +E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 43  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +L  + E+++         I SQ ++ +           G++  
Sbjct: 99  IKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQ 149

Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+
Sbjct: 150 IKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 209

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 210 IDDILDFTSTEEELGK 225


>gi|152978590|ref|YP_001344219.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
 gi|150840313|gb|ABR74284.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
          Length = 330

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N          A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 50  GGKRIRPMIALLAARALNYEGEKMPVCAAFIEFIHTASLLHDDV--VDESDMRRGRATAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++       ++++   ++S   N+  +G +  Q++++ 
Sbjct: 108 AAFGNAASVLVGDFIYTRAFQLMAK-----LNSLKMLTIMSDATNVLAEGEVQ-QLMNVN 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + ++ AIMA+A +  +  L+ +G  LG  FQL DD+L
Sbjct: 162 DPETTEENYMKVIYRKTARLFEVSTQAAAIMANADEKIESALQQYGRYLGTAFQLVDDVL 221

Query: 229 D 229
           D
Sbjct: 222 D 222


>gi|296332988|ref|ZP_06875445.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305674908|ref|YP_003866580.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296149839|gb|EFG90731.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305413152|gb|ADM38271.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 320

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V   +E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 43  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +L  + E+++         I SQ ++ +           G++  
Sbjct: 99  IKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQ 149

Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+
Sbjct: 150 IKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 209

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 210 IDDILDFTSTEEELGK 225


>gi|282880585|ref|ZP_06289292.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
 gi|281305688|gb|EFA97741.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
          Length = 325

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L+   A  F      A      +E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKRMRPMLILLIAKNFGGVTSIAQHAAVGLELLHTASLVHDDV--VDESGERRGQASVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            YD   A++ G+ +L+ A   +S           S+ ++    N+G + +  G++L   +
Sbjct: 103 TYDNKVAVLVGDYILSTALLQVSFT--------HSEAIIQNLANLG-RTLSNGEILQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           IQ++ I E   + + K KT AL       GA    A+  E E  R FG+ LGIIFQ+ DD
Sbjct: 154 IQNQDISEEVYYQVIKQKTAALFESCAVIGAQAGKATPEEVEAARQFGQTLGIIFQIRDD 213

Query: 227 LLDCEE 232
           + D  E
Sbjct: 214 IFDYFE 219


>gi|307543898|ref|YP_003896377.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581]
 gi|307215922|emb|CBV41192.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581]
          Length = 333

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 12/233 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRSFLVTE 60
           +P++L      I  ++ +        +QTQ   R  L+ AI   ++  GGK++R  LV  
Sbjct: 6   VPTQLTTPDTPIHAVVAEDFAAVNRTIQTQLASRIPLVEAIGQYIVDSGGKRMRPLLVLL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A          + +   IE +H  +L+HDD+  +D  ++RRG+ T +  +    +++ G
Sbjct: 66  AARSLGYEGDQHVALATLIEFMHTSTLLHDDV--VDESHMRRGRATANDAWGNAPSVLVG 123

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L + +F+++         ++R   +LS       +G +  Q+ ++ +  +DE   F  
Sbjct: 124 DFLYSRSFQMMVG-----VGSMRIMEILSAATCTIAEGEVQ-QLTNVGNPDVDEAAYFET 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + KT  L   A   GAI+A A+  ++  L+ +G  LG+ FQL DDLLD   D
Sbjct: 178 IQGKTAMLFEAASHCGAIIADATPEQEAALQAYGRYLGLAFQLVDDLLDYRGD 230


>gi|218550470|ref|YP_002384261.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469]
 gi|218358011|emb|CAQ90657.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469]
 gi|324115209|gb|EGC09173.1| polyprenyl synthetase [Escherichia fergusonii B253]
 gi|325498768|gb|EGC96627.1| octaprenyl diphosphate synthase [Escherichia fergusonii ECD227]
          Length = 323

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPNITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEQGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|220924250|ref|YP_002499552.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
 gi|219948857|gb|ACL59249.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
          Length = 345

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 13/186 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVG-----AAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK++R  L    A L         R G     A++E +H  +L+HDD+  +D   +RRG
Sbjct: 58  GGKRLRPILTLATAQLCGYRSAEGGRDGDVKLAASVEFMHTATLLHDDV--VDESDMRRG 115

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +    I++    +++ G+ LL  AF+++    +     +R+  +LS    +  +G +  Q
Sbjct: 116 RVAARIKWGNQASVLVGDFLLGQAFKMMVEVGS-----LRALDILSSAAAVIAEGEVM-Q 169

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   ++    E +   + + KT  L   ACE G ++A   ++E    R +G NLGI FQL
Sbjct: 170 LGAAKNTETTEDEYLAVIRAKTAELFAAACEVGPVLAERPKSEAAACRSYGMNLGIAFQL 229

Query: 224 ADDLLD 229
            DD LD
Sbjct: 230 VDDALD 235


>gi|2829443|sp|P55785|HEPS2_BACST RecName: Full=Heptaprenyl diphosphate synthase component 2;
           Short=HEPPP synthase subunit 2
 gi|1731683|dbj|BAA08725.1| component II of heptaprenyl diphosphate synthase [Geobacillus
           stearothermophilus]
          Length = 320

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A     +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+ 
Sbjct: 43  GGKRIRPVFVLLAARFGQYDLERMKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A+  G+ L   + E ++        N R+  +L+ T    +  +  G++  I+
Sbjct: 101 AKWSNRFAMYTGDYLFARSLERMAE-----LGNPRAHQVLAKT----IVEVCRGEIEQIK 151

Query: 169 DEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++  D+     ++++  KT  L+  +C+ GA+ A A +   +RL  FG  +G+ FQ+ D
Sbjct: 152 DKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITD 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    EE L K
Sbjct: 212 DILDFTGTEEQLGK 225


>gi|313836214|gb|EFS73928.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2]
 gi|314927649|gb|EFS91480.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1]
 gi|314971352|gb|EFT15450.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3]
          Length = 365

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 14/185 (7%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV  C+      +    +R    +E  H  SL HDD+  MD    RRG P+ 
Sbjct: 87  GGKRFRPLLVVLCSQFGHEADEADLVRAAVVVELTHVASLYHDDV--MDEASKRRGAPSA 144

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++++    AI+ G+    Y F   S    +L  D +R Q   + T +  +QG +      
Sbjct: 145 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVRLQ---ARTFSRLVQGQIAETRGP 197

Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            Q E  D    ++ +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLAD
Sbjct: 198 SQGE--DPLAHYLKVVADKTGSLIATSAVFGAMVSHASAENVTALEQFGEDIGEVFQLAD 255

Query: 226 DLLDC 230
           DL+D 
Sbjct: 256 DLIDV 260


>gi|320006972|gb|ADW01822.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 392

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 40/259 (15%)

Query: 5   LPSKLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTE 60
           +P  +   +  +D +L + L   L  A        D + S +  + L GGK++R+  V  
Sbjct: 26  VPGTVGGTAAAVDAVLAEHLRTRLGEARRTDAVFADEVASRVAAFVLQGGKRLRTAFV-R 84

Query: 61  CASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------- 110
           C  L    + +  T LRVGAA+E +   +L+HDD+  MD   +RRG P VH Q       
Sbjct: 85  CGWLAAGGSGDPGTPLRVGAALELLQACALVHDDV--MDESPVRRGAPAVHAQFARLHRE 142

Query: 111 ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                    Y    A++AG+  L +A ++++  +T L       L        G   M+ 
Sbjct: 143 GRMRGSATSYSATAAVLAGDLALVWADDLLT--ETALSSPYGGHLHREWQAMRGE--MVA 198

Query: 162 GQMLDIQDEFI---DETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFG 214
           GQ LD++ +     DETQ   I  +K+     +  E     GA +A A     + LR  G
Sbjct: 199 GQYLDMRAQATGSSDETQARNIATLKS---ALYTVERPLALGACLAGAGAPVMDALRSAG 255

Query: 215 ENLGIIFQLADDLLDCEED 233
              G+ FQL DDLL    D
Sbjct: 256 RCAGLAFQLHDDLLGAFGD 274


>gi|253576413|ref|ZP_04853743.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844306|gb|EES72324.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 324

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 28/212 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           DDLL +T+ H        LL A      GGK++R   V       N +      +   +E
Sbjct: 29  DDLLSETSLH--------LLKA------GGKRLRPVFVLLGGKFGNYDLQKLQYIAVPLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+   RRGK TV  ++D   A+  G+ +   A   +S        
Sbjct: 75  LIHSASLVHDDV--IDDADTRRGKATVKSKWDNRIAMYTGDYIYAKALMQVSELANPYIH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ-KMKTGALMCFACESGA 197
            I ++ M+ ++          G+M  I+D F  E  V  ++++ + KT  L+  +C+ GA
Sbjct: 133 RILAKAMVQMSI---------GEMEQIRDFFNTEQSVRNYLLRIRRKTALLIAISCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A A       L  +G N+G+ FQ+ DDLLD
Sbjct: 184 MAADAPAKVSALLYRYGYNVGMAFQIRDDLLD 215


>gi|312962998|ref|ZP_07777484.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6]
 gi|311282767|gb|EFQ61362.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6]
          Length = 322

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +  AS  + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCGASAEQAEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|297183903|gb|ADI20025.1| geranylgeranyl pyrophosphate synthase [uncultured gamma
           proteobacterium EB000_65A11]
          Length = 321

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N      + +   IE +H   L+HDD+  +D   +RRG+ TV+
Sbjct: 42  GGKRLRPLLVLLAARACNYQQHQHINLATIIEFLHTAMLLHDDV--VDESDLRRGRKTVN 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AFE++     ++ D +R   +LS   N   +G +  Q+ +I+
Sbjct: 100 AAWGNPASVLVGDFLHSRAFEMM----VEIGD-LRVMEILSHATNTIAEGEVQ-QLGNIR 153

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A  SGA++A AS  ++  L+ +G +LG+ FQL DD+L
Sbjct: 154 NPDATEQSYIEVINRKTAMLFEAASHSGAVLAGASPEQELSLQQYGCHLGVAFQLIDDIL 213

Query: 229 DCE 231
           D E
Sbjct: 214 DYE 216


>gi|294339015|emb|CAZ87362.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Thiomonas sp. 3As]
          Length = 336

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   +            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 57  GGKRLRPALLLLVSQALGFRGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSN 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ S       ++R   +L+   N+  +G +  Q+L++ 
Sbjct: 115 ALFGNSASVLVGDFLYSRAFQMMVS-----VGSMRILDILADATNVIAEGEVL-QLLNMH 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A  N +E +   G + G  FQL DDLL
Sbjct: 169 DPEVDEQRYLQVIRFKTAKLFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|242242749|ref|ZP_04797194.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
           W23144]
 gi|242233885|gb|EES36197.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
           W23144]
          Length = 332

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 18/201 (8%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91
           +D+ L    + LL  GGK++R   V       + N  +    RV  A+E IH  +L+HDD
Sbjct: 37  SDQTLQDASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTYRVAVALELIHMATLVHDD 96

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RRG+ T+  ++D+ TAI+ GN LL    + +S           S   +  T
Sbjct: 97  V--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKYLSEI---------SDTRVHTT 145

Query: 152 HNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKE 208
            +  +  +  G++   QD+F  ++T    ++++  KT  L+  + + GAI ++AS +   
Sbjct: 146 ISKSIVDVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVIR 205

Query: 209 RLRCFGENLGIIFQLADDLLD 229
           +L+  G  +G+ FQ+ DD+LD
Sbjct: 206 KLKMIGHYIGMSFQIIDDVLD 226


>gi|330841866|ref|XP_003292910.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum]
 gi|325076811|gb|EGC30569.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum]
          Length = 465

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 108/205 (52%), Gaps = 14/205 (6%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCY 85
           A ++  + +  L+S  +Y   L GK+IR  +V   +   + N   T +++   +E IH  
Sbjct: 168 APYLSKKTSPVLVSMSKYYFELKGKRIRPTIVLLLSKALSANVQKTQIKLAEVVEMIHTA 227

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D    RR   +++  Y    AI+ G+ LL  A  I+S+    ++++  ++
Sbjct: 228 SLVHDDV--IDEASTRRDVLSINQSYSNKLAILCGDFLLARASLILST----IRNSDVTE 281

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQ 204
            M     ++ L  ++ G+ +  +   +     ++ +  +KTG+L+  +C S AI++ A Q
Sbjct: 282 CM-----SLALAELVEGEFMQAKSSGVSSFDHYLKKTYLKTGSLITNSCRSAAILSGADQ 336

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
           N       FG+NLG+ FQ+ DDLLD
Sbjct: 337 NIVNISTEFGKNLGLAFQIIDDLLD 361


>gi|288960115|ref|YP_003450455.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510]
 gi|288912423|dbj|BAI73911.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510]
          Length = 342

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 19/230 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIR-------YALL-GGKKIRSFLVT 59
           E  +R  + LDDL    A  +   +    DR+ S +        Y +  GGK++R  L  
Sbjct: 12  EPKRRKSSPLDDLTALVAEDLSAVNQIILDRMQSQVEMIPQLAGYLIAAGGKRLRPVLTL 71

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A+L          + A +E IH  +L+HDD+  +D   +RRG  + +  +    +++ 
Sbjct: 72  AAANLCGYQGEHHRLLAAVVEFIHSATLLHDDV--VDESDLRRGMASANAVFGNKASVLV 129

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + AFE++   + Q  D +R   +LS    I  +G +  Q+    D    E     
Sbjct: 130 GDFLFSRAFEMMV--EVQSLDVLR---ILSGASAIIAEGEVL-QLRTTNDTETSEQAYLE 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + K KT  L   AC  GA++A+  Q E+  L  +G NLGI FQL DD+LD
Sbjct: 184 VIKGKTAELFAAACRVGAVVANRPQAEELALYDYGMNLGIAFQLVDDVLD 233


>gi|260220330|emb|CBA27759.1| hypothetical protein Csp_A03890 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 524

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+  C             + A +E IH  +L+HDD+  +D+  +RRG PT +
Sbjct: 48  GGKRLRPALLLLCCGALGYKGEQRFNMAAVVEFIHTATLLHDDV--VDDSDLRRGAPTAN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ L + AF+++   ++     +R   +L+   NI  +G +  Q++++ 
Sbjct: 106 ARFGNPASVLVGDFLYSRAFQMMVDAQS-----MRIMQVLADATNIISEGEVM-QLMNMH 159

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +DE     + + KT  L   +   GAI++ AS+  +E    FG+ +G  FQ+ DD+L
Sbjct: 160 NAALDEAGYLQVIRSKTAKLFEASARVGAILSQASETHEEACAEFGQAMGTAFQVIDDVL 219

Query: 229 DCEED 233
           D   D
Sbjct: 220 DYAGD 224


>gi|294675118|ref|YP_003575734.1| polyprenyl synthetase family protein [Prevotella ruminicola 23]
 gi|294472825|gb|ADE82214.1| polyprenyl synthetase family protein [Prevotella ruminicola 23]
          Length = 324

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  LV   A   N+  ++ +   AA+  E +H  SL+HDD+  +D    RRG+P+
Sbjct: 44  GGKRMRPMLVFLTAR--NLGEISDVTQNAALGLELLHTASLVHDDV--VDESSERRGQPS 99

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQML 165
           V+  Y+   A++ G+ +L+ A       +  L DN R  Q +  L   +    +L  Q+ 
Sbjct: 100 VNAAYNNKVAVLVGDYILSTAL-----LRVALSDNHRIVQHLAELGRKLAAGEVL--QLS 152

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +I ++ I E   + +   KT  L    C  GAI   AS+   E+   FG N+G+IFQ+ D
Sbjct: 153 NISNQDISEDVYYQVIDQKTAVLFESCCILGAISVGASEEMIEKAAKFGHNVGMIFQIRD 212

Query: 226 DLLD 229
           D+ D
Sbjct: 213 DIFD 216


>gi|119775962|ref|YP_928702.1| trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B]
 gi|119768462|gb|ABM01033.1| Trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B]
          Length = 333

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   N N    L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPLLSVLAARAVNYNGEGHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L      Q++   T+ +    +L  Q+++  
Sbjct: 111 ALFGNSASVLVGDFLYTRSFQMM----TELGSMKVLQVLADATNVLAEGEVL--QLMNCN 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A + +  +E L  +G+ LG  FQL DDLL
Sbjct: 165 DPNTTEESYMRVIYCKTAKLFEAATRLAAVLAGSDEKVEEALADYGKYLGTAFQLIDDLL 224

Query: 229 DCEED 233
           D   D
Sbjct: 225 DYTSD 229


>gi|78223658|ref|YP_385405.1| polyprenyl synthetase [Geobacter metallireducens GS-15]
 gi|78194913|gb|ABB32680.1| Polyprenyl synthetase [Geobacter metallireducens GS-15]
          Length = 322

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L+   A L        + + + IE IH  +L+HDD+  +DN  +RRG  + +
Sbjct: 41  GGKRIRPTLLLLAAKLCGYTGDRHVPLASVIEFIHTATLLHDDV--VDNATLRRGNASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++         ++R   ++S    I  +G +  Q+L   
Sbjct: 99  EVWGNEASVLVGDFLFSKSFSLMVQAG-----DLRVLKVISDATTIIAEGEVL-QLLCTS 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + K KT  L+  ACE+GAI+  A+  ++  LR FG +LGI FQL DD L
Sbjct: 153 DLDMTLERYIEVVKSKTAVLLSAACEAGAILGKATPEQELALRDFGMDLGIAFQLMDDTL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|57238790|ref|YP_179926.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578715|ref|YP_196927.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58616777|ref|YP_195976.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel]
 gi|57160869|emb|CAH57771.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58416389|emb|CAI27502.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel]
 gi|58417341|emb|CAI26545.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 325

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 18/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +      + N N    + + AAIE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPIIFFIICKMLNYNKNDKVYIAAAIEFIHNATLLHDDV--IDESELRRGEKTSN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---IG-LQGMLGGQM 164
             +    +I+ G+ LL  +F+ +   K     N+    +LS T N   IG ++ M+    
Sbjct: 107 FLWGNKASILVGDFLLAVSFQWLIQCK-----NLTILSILSKTSNTIIIGEVEQMVASYN 161

Query: 165 LDI-QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           ++I Q+++ID      I   KT +L    CES A +A  +  +   L+ FG NLGI FQ+
Sbjct: 162 INISQEKYID------IISAKTASLFEATCESAANLAEVNNEKIHALKQFGYNLGISFQI 215

Query: 224 ADDLLD 229
            DD+LD
Sbjct: 216 LDDILD 221


>gi|114564252|ref|YP_751766.1| trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB
           400]
 gi|114335545|gb|ABI72927.1| Trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB
           400]
          Length = 323

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSVLAARTVDYQGEHHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L +N++   +L+ T N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TEL-ENMKVLQVLAHTTNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +   ++A+ S  +++ L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEANYMRVIYCKTAKLFEAATQLAGVLANVSPEQEQALADYGKYLGTAFQLTDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|154686522|ref|YP_001421683.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
           amyloliquefaciens FZB42]
 gi|154352373|gb|ABS74452.1| HepT [Bacillus amyloliquefaciens FZB42]
          Length = 349

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 107/196 (54%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V   +E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 72  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 127

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +L  + E++    T+L D  ++  +LS T    +  +  G++  
Sbjct: 128 IKAKWDNRIAMYTGDYMLAGSLEMM----TRL-DEPKAHRILSKT----IVEVCLGEIEQ 178

Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+
Sbjct: 179 IRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 238

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 239 IDDILDFTSTEEELGK 254


>gi|124485508|ref|YP_001030124.1| GCN5-related N-acetyltransferase [Methanocorpusculum labreanum Z]
 gi|124363049|gb|ABN06857.1| Polyprenyl synthetase [Methanocorpusculum labreanum Z]
          Length = 322

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 25/222 (11%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-SLFNVNH 69
           E SK +D+ L     + ASH+       L+S       GGK++R  LV   A S+     
Sbjct: 20  EYSKAVDSTLQ----KAASHL-------LVS-------GGKRLRPALVLLSAESIRKGAS 61

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
               +   A+E  H ++L+HDD+  MD   +RRG+PTVH+ ++E TAI+AG+ L   AFE
Sbjct: 62  EDIFQAALALEWTHTFTLVHDDI--MDGDSLRRGRPTVHVVWNEATAILAGDVLYANAFE 119

Query: 130 IISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            +   K    ++  I  Q++    H +  +G       + + +   E  + M++K KTG 
Sbjct: 120 YLCRVKNATAESKVIAVQMLAHSCHEL-CEGQQEDVSFETRSDVTLEEYLSMVRK-KTGV 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L   A   GA +A     +   L   G N GI FQ+ DD++D
Sbjct: 178 LYAAAAGIGAALAGGDVKQISALYTLGLNTGIAFQIQDDIID 219


>gi|308174066|ref|YP_003920771.1| heptaprenyl diphosphate synthase component II [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606930|emb|CBI43301.1| heptaprenyl diphosphate synthase component II [Bacillus
           amyloliquefaciens DSM 7]
 gi|328912396|gb|AEB63992.1| heptaprenyl diphosphate synthase component II [Bacillus
           amyloliquefaciens LL3]
          Length = 320

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 107/196 (54%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V   +E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 43  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +L  + E++    T+L D  ++  +LS T    +  +  G++  
Sbjct: 99  IKAKWDNRIAMYTGDYMLAGSLEMM----TRL-DEPKAHRILSKT----IVEVCLGEIEQ 149

Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+
Sbjct: 150 IRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 209

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 210 IDDILDFTSTEEELGK 225


>gi|82778501|ref|YP_404850.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197]
 gi|309785515|ref|ZP_07680146.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617]
 gi|81242649|gb|ABB63359.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197]
 gi|308926635|gb|EFP72111.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617]
          Length = 323

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   NI  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNIIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|259650464|dbj|BAI42626.1| polyprenyl synthetase [Lactobacillus rhamnosus GG]
          Length = 312

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L+   A     ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV 
Sbjct: 35  GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 92

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +     AI AG+ L    F+++S   P+T  L+ N R  +M  +      Q      ++
Sbjct: 93  AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 150

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + ++           KT AL   A  +GA + H S  +K+    FG  LG+ FQ+ D
Sbjct: 151 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMID 204

Query: 226 DLLDCEE 232
           DLLD  +
Sbjct: 205 DLLDYTQ 211


>gi|295696360|ref|YP_003589598.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912]
 gi|295411962|gb|ADG06454.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912]
          Length = 327

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +V             AL R  AA+E IH  +L+HDD+  +D    RRG+PTV
Sbjct: 43  GGKRLRPLVVLVSGRFGPRRDTEALVRAAAALEMIHMATLVHDDV--IDRSDTRRGRPTV 100

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              + +  A+  G+ L   A E++S    +++D       L       +  M  G++  +
Sbjct: 101 KAAWGDQLALYTGDFLFARALELLS----EMEDR-----RLHEVTAWAIARMCQGELEQM 151

Query: 168 QDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            D + ID+   + +   + KT  LM  +C  GA  A A +     L  FG +LG+ FQ+ 
Sbjct: 152 HDLYRIDQPLFRYYRRIRQKTALLMAVSCLVGARAAEADEETARALWRFGGHLGMAFQIV 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDVLD 216


>gi|158422531|ref|YP_001523823.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571]
 gi|158329420|dbj|BAF86905.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571]
          Length = 335

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA+L +      +++ A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 54  GGKRLRPMLTIACAALSSYEGDGHIKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++         +I S    ++     +Q          +
Sbjct: 112 KLWGNEASVLVGDFLLGQAFKMMVEVGILECLDILSTAACTIAEGEVMQLAAAKNTETSE 171

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT  L   ACE GA++    + E+   R FG NLGI FQL DD L
Sbjct: 172 DDYL------AVIRGKTAELFAAACEVGAVLNARPKAEQAACRSFGMNLGIAFQLVDDAL 225

Query: 229 D 229
           D
Sbjct: 226 D 226


>gi|258509177|ref|YP_003171928.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG]
 gi|257149104|emb|CAR88077.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG]
          Length = 322

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L+   A     ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV 
Sbjct: 45  GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +     AI AG+ L    F+++S   P+T  L+ N R  +M  +      Q      ++
Sbjct: 103 AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 160

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + ++           KT AL   A  +GA + H S  +K+    FG  LG+ FQ+ D
Sbjct: 161 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMID 214

Query: 226 DLLDCEE 232
           DLLD  +
Sbjct: 215 DLLDYTQ 221


>gi|199597413|ref|ZP_03210843.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
 gi|199591673|gb|EDY99749.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
          Length = 322

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L+   A     ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV 
Sbjct: 45  GGKMLRSGLMLMLARFGEPDNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVS 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +     AI AG+ L    F+++S   P+T  L+ N R  +M  +      Q      ++
Sbjct: 103 AESGNREAIYAGDFLFAIYFQLLSEQDPETVDLRTNAR--IMKRIFMGEVDQNGPSAPLI 160

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + ++           KT AL   A  +GA + H S  +K+    FG  LG+ FQ+ D
Sbjct: 161 PTVNAYLSAI------SGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMID 214

Query: 226 DLLDCEE 232
           DLLD  +
Sbjct: 215 DLLDYTQ 221


>gi|291435805|ref|ZP_06575195.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
 gi|291338700|gb|EFE65656.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
          Length = 379

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 88  GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 145

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T   D  R+   L+       + ++ GQ  DI 
Sbjct: 146 KVHGPAQAILVGDALFALANEVLLELGT--VDAGRAARRLTTAS----RALIDGQAQDIS 199

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 200 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVD 259

Query: 226 DLL 228
           DLL
Sbjct: 260 DLL 262


>gi|84515724|ref|ZP_01003085.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
 gi|84510166|gb|EAQ06622.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
          Length = 332

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A +   +    + + A +E IH  +L+H
Sbjct: 33  MASEHAPRIPQVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHIHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 93  DDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +   +D +I       + + KT AL   A E G  +A      K+ 
Sbjct: 151 IAEGEVLQLTAAADLATTEDIYIK------VVRGKTAALFSAAMEVGGEIAGQDPAIKQA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LFDYGDALGISFQIVDDLLD 224


>gi|328552808|gb|AEB23300.1| heptaprenyl diphosphate synthase component II [Bacillus
           amyloliquefaciens TA208]
          Length = 320

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 107/196 (54%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V   +E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 43  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +L  + E++    T+L D  ++  +LS T    +  +  G++  
Sbjct: 99  IKAKWDNRIAMYTGDYMLADSLEMM----TRL-DEPKAHRILSKT----IVEVCLGEIEQ 149

Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+
Sbjct: 150 IRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 209

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 210 IDDILDFTSTEEELGK 225


>gi|319897631|ref|YP_004135828.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031]
 gi|317433137|emb|CBY81511.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031]
          Length = 329

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|57866983|ref|YP_188615.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A]
 gi|282876098|ref|ZP_06284965.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis SK135]
 gi|57637641|gb|AAW54429.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A]
 gi|281295123|gb|EFA87650.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis SK135]
 gi|329725457|gb|EGG61940.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis VCU144]
 gi|329735239|gb|EGG71531.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis VCU045]
 gi|329737300|gb|EGG73554.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis VCU028]
          Length = 319

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 20/202 (9%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91
           +D+ L    + LL  GGK++R   V       + N  +    RV  A+E IH  +L+HDD
Sbjct: 24  SDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTYRVAVALELIHMATLVHDD 83

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150
           +  +D    RRG+ T+  ++D+ TAI+ GN LL    + +S    T++   I   ++   
Sbjct: 84  V--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEISDTRVHSTISKSIV--- 138

Query: 151 THNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEK 207
                   +  G++   QD+F  ++T    ++++  KT  L+  + + GAI ++AS +  
Sbjct: 139 -------DVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVI 191

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
            +L+  G  +G+ FQ+ DD+LD
Sbjct: 192 RKLKMIGHYIGMSFQIIDDVLD 213


>gi|254449834|ref|ZP_05063271.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus
           238]
 gi|198264240|gb|EDY88510.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus
           238]
          Length = 332

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A +        + + A +E IH  +L+H
Sbjct: 33  MASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAKMCGYGGPYHVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 93  DDV--VDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +    D    E     I + KT AL   A E G ++A   +   + 
Sbjct: 151 IAEGEVLQ------LTAASDLATSEAVYLQIVRGKTAALFSAALEVGGVIAQQDEALVKA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LYDYGDALGIGFQIVDDLLD 224


>gi|170017917|ref|YP_001728836.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
 gi|169804774|gb|ACA83392.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
          Length = 332

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 21/226 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNH 69
           E S  +  +L+D+    + H+  +  D   +AIR  L  GK IR  L    + L  N  +
Sbjct: 15  ELSAPLQAVLEDM--SASWHIGFEEID---TAIRSQLNAGKLIRPALTLLFSRLSDNPYN 69

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A+ +GA++E +H  +LIHDD+  +D   +RRG  ++  Q+ + TA+ AG+ LLT  F 
Sbjct: 70  AKAISLGASLELLHLATLIHDDI--IDESKLRRGHESIQSQFGKDTAVYAGDYLLTGMFS 127

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTG 186
           ++        + +  +          LQ +L G+++  Q+ +    D        K KT 
Sbjct: 128 LLERADKPAANKLALK---------ALQEILFGELVQKQNRYNLSADFNSYLTQIKGKTA 178

Query: 187 ALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           AL   +   G I   + S+   E +   GEN+G+ FQL DD LD E
Sbjct: 179 ALFRLSVSFGVISGDNYSEPLLETVSHLGENIGVTFQLLDDYLDFE 224


>gi|313200295|ref|YP_004038953.1| trans-hexaprenyltranstransferase [Methylovorus sp. MP688]
 gi|312439611|gb|ADQ83717.1| Trans-hexaprenyltranstransferase [Methylovorus sp. MP688]
          Length = 309

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F   +     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPALVLLSAGAFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + + AF+++   ++     +R   +L+   NI  +G +  Q+L++ 
Sbjct: 88  TLFGNAASVLVGDFIYSRAFQMMVGVES-----MRVMEVLAEATNIIAEGEVL-QLLNVH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I +     +   KT  L   A   GAI+  AS+ +++ +  +G  LG  FQL DD+L
Sbjct: 142 DADITDEAYLKVIHYKTAKLFEAATRLGAIICSASEQDEQAMAEYGMRLGTAFQLIDDVL 201

Query: 229 DCEED 233
           D   D
Sbjct: 202 DFSGD 206


>gi|293366563|ref|ZP_06613240.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319332|gb|EFE59701.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 332

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 20/202 (9%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91
           +D+ L    + LL  GGK++R   V       + N  +    RV  A+E IH  +L+HDD
Sbjct: 37  SDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTYRVAVALELIHMATLVHDD 96

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150
           +  +D    RRG+ T+  ++D+ TAI+ GN LL    + +S    T++   I   ++   
Sbjct: 97  V--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEISDTRVHSTISKSIV--- 151

Query: 151 THNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEK 207
                   +  G++   QD+F  ++T    ++++  KT  L+  + + GAI ++AS +  
Sbjct: 152 -------DVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVI 204

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
            +L+  G  +G+ FQ+ DD+LD
Sbjct: 205 RKLKMIGHYIGMSFQIIDDVLD 226


>gi|208809557|ref|ZP_03251894.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208729358|gb|EDZ78959.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4206]
          Length = 324

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 44  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 102 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 156 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 215

Query: 229 DCEED 233
           D   D
Sbjct: 216 DYNAD 220


>gi|92118681|ref|YP_578410.1| farnesyltranstransferase [Nitrobacter hamburgensis X14]
 gi|91801575|gb|ABE63950.1| Farnesyltranstransferase [Nitrobacter hamburgensis X14]
          Length = 336

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   +    +++ A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAHLAGYSGEGHIKLAASVEFMHTATLLHDDV--VDESELRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAAAATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G ++    + E+     FG NLGI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLGGRPKAEEMAAASFGMNLGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|206578772|ref|YP_002236401.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342]
 gi|288933385|ref|YP_003437444.1| dimethylallyltranstransferase [Klebsiella variicola At-22]
 gi|290511564|ref|ZP_06550933.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55]
 gi|206567830|gb|ACI09606.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342]
 gi|288888114|gb|ADC56432.1| Dimethylallyltranstransferase [Klebsiella variicola At-22]
 gi|289776557|gb|EFD84556.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF+++    TQL  +++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMM----TQLG-SLKILEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   ++A  S  E+  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQCAGMLADCSAEEERALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|313763299|gb|EFS34663.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1]
 gi|313814961|gb|EFS52675.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1]
 gi|313829356|gb|EFS67070.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2]
 gi|314916753|gb|EFS80584.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4]
 gi|314919121|gb|EFS82952.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1]
 gi|314921201|gb|EFS85032.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3]
 gi|314930371|gb|EFS94202.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1]
 gi|314956154|gb|EFT00550.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1]
 gi|314959687|gb|EFT03789.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1]
 gi|314969768|gb|EFT13866.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1]
 gi|315098089|gb|EFT70065.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2]
 gi|315102693|gb|EFT74669.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1]
 gi|315108835|gb|EFT80811.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2]
 gi|327451646|gb|EGE98300.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3]
 gi|327452299|gb|EGE98953.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2]
 gi|328752132|gb|EGF65748.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2]
 gi|328757024|gb|EGF70640.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1]
          Length = 324

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV  C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ 
Sbjct: 46  GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++++    AI+ G+    Y F   S    +L  D ++ Q   + T +  +QG +      
Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156

Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            Q +  D    ++ +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLAD
Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214

Query: 226 DLLD 229
           DL+D
Sbjct: 215 DLID 218


>gi|5712726|gb|AAD47627.1| octylprenyl diphosphate synthase-like protein [Pseudomonas sp.
           BG33R]
          Length = 322

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + + +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 AMWGNAPSVLVGDFMYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT      +  S A +  A+  + E LR FG+NLG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMFFEASTHSAAALCGATAEQAEALRTFGDNLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|256825934|ref|YP_003149894.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
           20547]
 gi|256689327|gb|ACV07129.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
           20547]
          Length = 324

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 23/209 (11%)

Query: 33  TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
            QH+D  ++     L+  GGK+ R  L    + L +      ++  AA+E +H  SL HD
Sbjct: 28  VQHDDPFIAEASAYLMQAGGKRFRPQLALLVSGLGDGPTPEVVKAAAAVELVHLASLYHD 87

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MD+  +RRG P+ + +Y   T+++ G+ L   +  +++    +    +R Q    +
Sbjct: 88  DV--MDDADLRRGVPSANARYGNATSVVVGDMLFGKSSALVAELGPE---AVRLQADTFV 142

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQ 204
                   +  GQ   I+DE      V  +  +      KTGAL+  A   GA  +    
Sbjct: 143 R-------LCAGQ---IRDERPVPAGVDPVDHLLGVLADKTGALIAAAACYGAQFSGCDA 192

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
              E +  FGE LG++FQLADDLLD   D
Sbjct: 193 ATVELMGAFGERLGLVFQLADDLLDVASD 221


>gi|226312054|ref|YP_002771948.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis
           NBRC 100599]
 gi|226095002|dbj|BAH43444.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis
           NBRC 100599]
          Length = 321

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 35/225 (15%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  K IDT + +L L +++H        LL A      GGK+IR   V       N +  
Sbjct: 20  ELEKAIDTPVRELYL-SSTH--------LLKA------GGKRIRPVFVLLGGKWGNYDVK 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               V   +E IH  SL+HDD+  +D+   RRGK TV +++D   A+ AG+ +   A  I
Sbjct: 65  KLKHVAVPLELIHMASLVHDDV--IDDADKRRGKDTVRMKWDNKVAMYAGDYIFARALAI 122

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNI---GLQGMLGGQMLDIQD--EFIDETQVFMIQ-KMK 184
            S            QL +   H I    +  +  G++  ++D   +    + ++ + K K
Sbjct: 123 AS------------QLPIPQLHQILSNAIVEVCKGEIQQVKDLNNWDQNFRTYLRRIKRK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T  L+  +C+ GA+ + AS +   ++  +G N+G+ FQ+ DD+LD
Sbjct: 171 TALLIAISCQLGAVASGASADMIRKMYWYGYNVGMAFQITDDILD 215


>gi|294012754|ref|YP_003546214.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S]
 gi|292676084|dbj|BAI97602.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S]
          Length = 346

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA L         ++ AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 65  GGKRMRPMLTLACADLVGYAGSRHYKLAAAVEFIHTATLLHDDV--VDGSGLRRGRKTAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L + +FE++   ++     ++   +LS    +  +G +  Q+   +
Sbjct: 123 IIWGNSASVLVGDFLFSRSFELMVEAES-----LKVLKILSNASAVIAEGEVN-QLTAQR 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E Q   I   KT AL   AC   A++A   + E++ L  +G NLGI FQL DD +
Sbjct: 177 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRDEAEEQALDVYGRNLGIAFQLIDDAI 236

Query: 229 DCEED 233
           D E D
Sbjct: 237 DYESD 241


>gi|307294472|ref|ZP_07574314.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
 gi|306878946|gb|EFN10164.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
          Length = 346

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA L         ++ AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 65  GGKRMRPMLTLACADLVGYAGSRHYKLAAAVEFIHTATLLHDDV--VDGSGLRRGRKTAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L + +FE++   ++     ++   +LS    +  +G +  Q+   +
Sbjct: 123 IIWGNSASVLVGDFLFSRSFELMVEAES-----LKVLKILSNASAVIAEGEVN-QLTAQR 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E Q   I   KT AL   AC   A++A   + E++ L  +G NLGI FQL DD +
Sbjct: 177 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRDEAEEQALDVYGRNLGIAFQLIDDAI 236

Query: 229 DCEED 233
           D E D
Sbjct: 237 DYESD 241


>gi|251772722|gb|EES53284.1| trans-hexaprenyltranstransferase [Leptospirillum ferrodiazotrophum]
          Length = 332

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 23/197 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   + L        + + A +E IH  +L+HDD+  +DN  +RRGK   H
Sbjct: 51  GGKRLRPLLMVISSRLSGAEGPEPILLAAVVEMIHTATLLHDDV--VDNADVRRGKKAAH 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    AI+ G+ L   +  +     +   ++       SLT  +  + M  G++L++ 
Sbjct: 109 QRWGNQPAILVGDFLYANSLWLAMGLHSHEVND-------SLT--LACKKMSEGEILEL- 158

Query: 169 DEFID------ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             F+D      E Q + +   KT  L    C  G I+   S  EKE L  FG  +G+ FQ
Sbjct: 159 --FLDGNLEATEDQYYNVAACKTATLTASTCRLGGILGGLSDEEKEALDRFGYYVGMAFQ 216

Query: 223 LADDLLD---CEEDLPK 236
           +ADD LD    EE L K
Sbjct: 217 VADDALDYMASEEKLGK 233


>gi|323961158|gb|EGB56772.1| polyprenyl synthetase [Escherichia coli H489]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|298674206|ref|YP_003725956.1| polyprenyl synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287194|gb|ADI73160.1| Polyprenyl synthetase [Methanohalobium evestigatum Z-7303]
          Length = 288

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 10/189 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  ++     +   +  T++    A+E +H  SLIHDDL  +D+G IRRG P+ H
Sbjct: 40  GGKRIRPIILMLSTDICGGDSKTSINAALAVELMHSASLIHDDL--IDDGIIRRGVPSAH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L++ + E++SS           Q  +S+ H   +   LGG      
Sbjct: 98  KKFGHSAAMLCGDFLISKSIELMSSYGHNAITEF-GQAGMSMAHGETID--LGG-----D 149

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E   F     KT +L       GA ++ A      R R +GE +G  +Q+ DDLL
Sbjct: 150 DAGFVEVNYFDCIYKKTASLFAACASIGAYISGADDEMVHRCRLYGEYMGTAYQIVDDLL 209

Query: 229 DCEEDLPKK 237
           +   ++  K
Sbjct: 210 EYLHEIDDK 218


>gi|308270513|emb|CBX27125.1| hypothetical protein N47_A11540 [uncultured Desulfobacterium sp.]
          Length = 326

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A + N             E +H  +L+HDD+  +D   +RRGKP  +
Sbjct: 45  GGKRLRPLLMVLSARICNYKGGYDKVFSTIFEYLHAATLLHDDV--IDGAELRRGKPVAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   T ++ G+ LL     I ++  T+    I+  ++  +T N+  QG +  Q+L   
Sbjct: 103 SIWKNSTVVLTGDFLLARGLSIAAA--TEKPSVIK--IVAEITENMS-QGEIE-QLLRKG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   I   KT  L   AC   A +A+AS+ E++ +  +G NLG+ FQ+ADDLL
Sbjct: 157 DINLTEEEYRKIIWRKTAVLFQGACRISARLANASKREEKAVSNYGYNLGMAFQMADDLL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|296313619|ref|ZP_06863560.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC
           43768]
 gi|296839857|gb|EFH23795.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC
           43768]
          Length = 324

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++        D++R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|169779988|ref|XP_001824458.1| hexaprenyl pyrophosphate synthase [Aspergillus oryzae RIB40]
 gi|238505986|ref|XP_002384195.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           flavus NRRL3357]
 gi|83773198|dbj|BAE63325.1| unnamed protein product [Aspergillus oryzae]
 gi|220690309|gb|EED46659.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           flavus NRRL3357]
          Length = 451

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 21/169 (12%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+    E IH  SL+HDD+  +DN   RR   + ++Q+    A++AG+ LL  A   
Sbjct: 190 TQRRLAEITELIHTASLLHDDV--IDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVA 247

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK 182
           ++    +L+D   ++L+ ++  N     ++ G+ + ++    DE    F DET  + +QK
Sbjct: 248 LA----RLRDPEVTELLATVIAN-----LVEGEFMQLKNTASDEKNPVFTDETISYYLQK 298

Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +KT +L+  +C + A++  ++    E    +G NLG+ FQL DD+LD
Sbjct: 299 TYLKTASLISKSCRAAALLGDSTPQVVEAAYAYGRNLGLAFQLVDDMLD 347


>gi|220905174|ref|YP_002480486.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869473|gb|ACL49808.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 321

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   +      +   +E +H  +L+HDD+  +DN   RRGKP  H
Sbjct: 41  GGKRLRPLLTVLTARLLGHDREDIHDLAVTLEMLHAATLLHDDV--LDNAMSRRGKPAAH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y+  + I+AG+ LL  A   ++          R    L+   +        G++L+I 
Sbjct: 99  TLYNVSSVILAGDALLAEANAQVAR---------RGDPRLTRCFSEATSRTAAGEILEIA 149

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            +   +T     +++   KT  L+  ACE GA+ A A +        +GENLG+ FQ+ D
Sbjct: 150 AQGRVDTSAGHYEEIVRGKTAWLIRAACEMGALAAEADEASVAAAAAYGENLGMAFQMVD 209

Query: 226 DLLD 229
           D LD
Sbjct: 210 DALD 213


>gi|27468075|ref|NP_764712.1| heptaprenyl diphosphate syntase component II [Staphylococcus
           epidermidis ATCC 12228]
 gi|27315620|gb|AAO04754.1|AE016747_251 heptaprenyl diphosphate syntase component II [Staphylococcus
           epidermidis ATCC 12228]
          Length = 339

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 20/202 (9%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDD 91
           +D+ L    + LL  GGK++R   V       + N  +    RV  A+E IH  +L+HDD
Sbjct: 44  SDQTLQEASFHLLSSGGKRVRPAFVILSGQFGSNNKPSEDTYRVAVALELIHMATLVHDD 103

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSL 150
           +  +D    RRG+ T+  ++D+ TAI+ GN LL    + +S    T++   I   ++   
Sbjct: 104 V--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHLSEISDTRVHSTISKSIV--- 158

Query: 151 THNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEK 207
                   +  G++   QD+F  ++T    ++++  KT  L+  + + GAI ++AS +  
Sbjct: 159 -------DVCRGELFQFQDQFNSNQTITNYLRRINRKTALLIQLSTQVGAITSNASNDVI 211

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
            +L+  G  +G+ FQ+ DD+LD
Sbjct: 212 RKLKMIGHYIGMSFQIIDDVLD 233


>gi|15803727|ref|NP_289761.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 EDL933]
 gi|15833320|ref|NP_312093.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168751593|ref|ZP_02776615.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754169|ref|ZP_02779176.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168765367|ref|ZP_02790374.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168769043|ref|ZP_02794050.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168778214|ref|ZP_02803221.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781331|ref|ZP_02806338.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786073|ref|ZP_02811080.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC869]
 gi|168800901|ref|ZP_02825908.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC508]
 gi|195940043|ref|ZP_03085425.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208813351|ref|ZP_03254680.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818474|ref|ZP_03258794.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396313|ref|YP_002272657.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327318|ref|ZP_03443401.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254795136|ref|YP_003079973.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261228198|ref|ZP_05942479.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255054|ref|ZP_05947587.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|12517802|gb|AAG58321.1|AE005547_7 octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           EDL933]
 gi|13363539|dbj|BAB37489.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           Sakai]
 gi|187766779|gb|EDU30623.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014375|gb|EDU52497.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001013|gb|EDU69999.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358538|gb|EDU76957.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361792|gb|EDU80211.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189364885|gb|EDU83301.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374093|gb|EDU92509.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC869]
 gi|189376838|gb|EDU95254.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC508]
 gi|208734628|gb|EDZ83315.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738597|gb|EDZ86279.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157713|gb|ACI35146.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209758168|gb|ACI77396.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|209758170|gb|ACI77397.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|209758172|gb|ACI77398.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|209758176|gb|ACI77400.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|217319685|gb|EEC28110.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254594536|gb|ACT73897.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           TW14359]
 gi|320189540|gb|EFW64199.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640258|gb|EFX09830.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645555|gb|EFX14564.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str.
           493-89]
 gi|320650865|gb|EFX19322.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. H
           2687]
 gi|320666771|gb|EFX33750.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326337887|gb|EGD61721.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           1125]
 gi|326347457|gb|EGD71182.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           1044]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|215488503|ref|YP_002330934.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215266575|emb|CAS11014.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAIGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|311109204|ref|YP_003982057.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans
           A8]
 gi|310763893|gb|ADP19342.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans
           A8]
          Length = 308

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRMRPAMVLMVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++        +++R   +LS    +  +G +  Q+L++ 
Sbjct: 88  AVFGNAASVLVGDYLYSRSFEMMVE-----ANSMRVMSILSEATTVIAEGEVL-QLLNVH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + + +   + + KT  L   A + GA++A A+  ++     +G ++G  FQL DD+L
Sbjct: 142 DPDVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVL 201

Query: 229 DCEED 233
           D   D
Sbjct: 202 DYSGD 206


>gi|73654128|gb|AAZ79359.1| farnesyl diphosphate synthase [Citromicrobium sp. JL-364]
          Length = 146

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 4/135 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PT HI +DE TAI+AG+ L   AF  ++     L + +R  ++  L    G  GM
Sbjct: 13  LRRGRPTTHIAFDEATAILAGDALQALAFGWLAE-APGLPEPVRLIMVRELARASGHGGM 71

Query: 160 LGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGEN 216
           +GGQ +D++   + +   Q+  + + KTGAL+  +   GA+ A + S+     L  + + 
Sbjct: 72  VGGQAIDLESVGKNLALAQLETMHRHKTGALIETSVRIGALTAPSVSEQALASLTEYAKA 131

Query: 217 LGIIFQLADDLLDCE 231
           LG+ FQ+ DD+LD E
Sbjct: 132 LGLAFQVQDDILDVE 146


>gi|320160874|ref|YP_004174098.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
 gi|319994727|dbj|BAJ63498.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
          Length = 328

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 15/193 (7%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           D LLSA      GGK+IR  L      +        L + AAIE +H  +L+HDDL  +D
Sbjct: 43  DLLLSA------GGKRIRPTLTLLAGKMLRAKGEPLLHLAAAIEMLHTATLVHDDL--ID 94

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              +RRG PT++ ++     ++ G+ L   A  + +       D+I    + S T +I +
Sbjct: 95  GSLLRRGMPTLNSRWSPGATVLTGDYLFARAANLAAQ-----TDSIPVMKLFSETLSIIV 149

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            G L  QM   + +  D T  +     KT +L   + +S A++   S+   E LR +G +
Sbjct: 150 GGELT-QMFSTRCK-ADRTNYYQRIYAKTASLFETSAKSAALLCLTSELHTEALRAYGYS 207

Query: 217 LGIIFQLADDLLD 229
           +G+ FQ+ DD+LD
Sbjct: 208 VGMAFQIIDDILD 220


>gi|218131733|ref|ZP_03460537.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697]
 gi|317474650|ref|ZP_07933924.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217986036|gb|EEC52375.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697]
 gi|316909331|gb|EFV31011.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 324

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 16/188 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+N      L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLYNEVRPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  A   +           R+  ++ L  N+G Q +  G++L + +
Sbjct: 103 IFNNKVAVLTGDYLLATALVEVGMT--------RNYAIIDLVSNLG-QDLAEGELLQLSN 153

Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E+ +E    +I+K KT  L     ++GA+       + E  R FGE +G+ FQ+ D
Sbjct: 154 VSNPEYSEEVYFDVIRK-KTAVLFAACMKAGALSVGVDDEKAEYARLFGEYIGLCFQIKD 212

Query: 226 DLLDCEED 233
           D+ D  E+
Sbjct: 213 DIFDYYEN 220


>gi|318058274|ref|ZP_07976997.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
 gi|318076936|ref|ZP_07984268.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
          Length = 386

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +   +  T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 90  GGKAVRPALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 147

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+     +L      +    LT     + ++ GQ  DI 
Sbjct: 148 KVHGPAQAILVGDALFALANEIL----LELGTPEAGRATRRLTR--ATRALIDGQAQDIS 201

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 202 YEHRDRVTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVD 261

Query: 226 DLL 228
           DLL
Sbjct: 262 DLL 264


>gi|306816471|ref|ZP_07450603.1| octaprenyl diphosphate synthase [Escherichia coli NC101]
 gi|222034904|emb|CAP77647.1| Octaprenyl-diphosphate synthase [Escherichia coli LF82]
 gi|305850036|gb|EFM50495.1| octaprenyl diphosphate synthase [Escherichia coli NC101]
 gi|312947744|gb|ADR28571.1| octaprenyl diphosphate synthase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNVHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|50843372|ref|YP_056599.1| heptaprenyl diphosphate synthase component II [Propionibacterium
           acnes KPA171202]
 gi|289425619|ref|ZP_06427391.1| polyprenyl synthetase [Propionibacterium acnes SK187]
 gi|289426999|ref|ZP_06428718.1| polyprenyl synthetase [Propionibacterium acnes J165]
 gi|295131445|ref|YP_003582108.1| polyprenyl synthetase [Propionibacterium acnes SK137]
 gi|50840974|gb|AAT83641.1| heptaprenyl diphosphate synthase component II [Propionibacterium
           acnes KPA171202]
 gi|289153920|gb|EFD02613.1| polyprenyl synthetase [Propionibacterium acnes SK187]
 gi|289159821|gb|EFD08006.1| polyprenyl synthetase [Propionibacterium acnes J165]
 gi|291375644|gb|ADD99498.1| polyprenyl synthetase [Propionibacterium acnes SK137]
 gi|313773345|gb|EFS39311.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1]
 gi|313793594|gb|EFS41634.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1]
 gi|313802896|gb|EFS44109.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2]
 gi|313806342|gb|EFS44858.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2]
 gi|313810752|gb|EFS48466.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1]
 gi|313813689|gb|EFS51403.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1]
 gi|313821259|gb|EFS58973.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1]
 gi|313822286|gb|EFS60000.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2]
 gi|313826156|gb|EFS63870.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1]
 gi|313831063|gb|EFS68777.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1]
 gi|313833193|gb|EFS70907.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1]
 gi|313838164|gb|EFS75878.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1]
 gi|314926005|gb|EFS89836.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3]
 gi|314962260|gb|EFT06361.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2]
 gi|314963225|gb|EFT07325.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1]
 gi|314973953|gb|EFT18049.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1]
 gi|314976881|gb|EFT20976.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1]
 gi|314979346|gb|EFT23440.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2]
 gi|314985002|gb|EFT29094.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1]
 gi|314986322|gb|EFT30414.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2]
 gi|314988581|gb|EFT32672.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3]
 gi|315079698|gb|EFT51686.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2]
 gi|315083912|gb|EFT55888.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2]
 gi|315085048|gb|EFT57024.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3]
 gi|315089477|gb|EFT61453.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1]
 gi|315097704|gb|EFT69680.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1]
 gi|315107928|gb|EFT79904.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1]
 gi|327325724|gb|EGE67521.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA3]
 gi|327330828|gb|EGE72573.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA2]
 gi|327442879|gb|EGE89533.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2]
 gi|327445271|gb|EGE91925.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1]
 gi|327447743|gb|EGE94397.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2]
 gi|327452516|gb|EGE99170.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1]
 gi|328755076|gb|EGF68692.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1]
 gi|328761560|gb|EGF75078.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL099PA1]
 gi|332676315|gb|AEE73131.1| heptaprenyl diphosphate synthase component 2 [Propionibacterium
           acnes 266]
          Length = 324

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV  C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ 
Sbjct: 46  GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++++    AI+ G+    Y F   S    +L  D ++ Q   + T +  +QG +      
Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156

Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            Q +  D    ++ +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLAD
Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214

Query: 226 DLLD 229
           DL+D
Sbjct: 215 DLID 218


>gi|282855260|ref|ZP_06264592.1| polyprenyl synthetase [Propionibacterium acnes J139]
 gi|282581848|gb|EFB87233.1| polyprenyl synthetase [Propionibacterium acnes J139]
 gi|314924082|gb|EFS87913.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1]
 gi|314965044|gb|EFT09143.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2]
 gi|314983126|gb|EFT27218.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3]
 gi|315090668|gb|EFT62644.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4]
 gi|315093825|gb|EFT65801.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1]
 gi|315104041|gb|EFT76017.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2]
 gi|327326484|gb|EGE68273.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL103PA1]
          Length = 324

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV  C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ 
Sbjct: 46  GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++++    AI+ G+    Y F   S    +L  D ++ Q   + T +  +QG +      
Sbjct: 104 NLRWGNSVAIMVGD----YLFSRASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156

Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            Q +  D    ++ +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLAD
Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214

Query: 226 DLLD 229
           DL+D
Sbjct: 215 DLID 218


>gi|16131077|ref|NP_417654.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24114476|ref|NP_708986.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301]
 gi|30064525|ref|NP_838696.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T]
 gi|74313724|ref|YP_312143.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046]
 gi|82545575|ref|YP_409522.1| octaprenyl diphosphate synthase [Shigella boydii Sb227]
 gi|89109950|ref|AP_003730.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           W3110]
 gi|110807053|ref|YP_690573.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401]
 gi|157155105|ref|YP_001464663.1| octaprenyl diphosphate synthase [Escherichia coli E24377A]
 gi|170018563|ref|YP_001723517.1| octaprenyl diphosphate synthase [Escherichia coli ATCC 8739]
 gi|170082722|ref|YP_001732042.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170765991|ref|ZP_02900802.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627]
 gi|188492215|ref|ZP_02999485.1| polyprenyl synthetase [Escherichia coli 53638]
 gi|194434492|ref|ZP_03066752.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012]
 gi|194439175|ref|ZP_03071256.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1]
 gi|209920662|ref|YP_002294746.1| octaprenyl diphosphate synthase [Escherichia coli SE11]
 gi|218555757|ref|YP_002388670.1| octaprenyl diphosphate synthase [Escherichia coli IAI1]
 gi|218696892|ref|YP_002404559.1| octaprenyl diphosphate synthase [Escherichia coli 55989]
 gi|218701956|ref|YP_002409585.1| octaprenyl diphosphate synthase [Escherichia coli IAI39]
 gi|218706807|ref|YP_002414326.1| octaprenyl diphosphate synthase [Escherichia coli UMN026]
 gi|238902289|ref|YP_002928085.1| octaprenyl diphosphate synthase [Escherichia coli BW2952]
 gi|253771979|ref|YP_003034810.1| octaprenyl diphosphate synthase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163129|ref|YP_003046237.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606]
 gi|256018894|ref|ZP_05432759.1| octaprenyl diphosphate synthase [Shigella sp. D9]
 gi|256024238|ref|ZP_05438103.1| octaprenyl diphosphate synthase [Escherichia sp. 4_1_40B]
 gi|260857314|ref|YP_003231205.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str.
           11368]
 gi|260869938|ref|YP_003236340.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str.
           11128]
 gi|291284561|ref|YP_003501379.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293406796|ref|ZP_06650722.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412]
 gi|298382537|ref|ZP_06992134.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302]
 gi|300817559|ref|ZP_07097775.1| polyprenyl synthetase [Escherichia coli MS 107-1]
 gi|300823848|ref|ZP_07103972.1| polyprenyl synthetase [Escherichia coli MS 119-7]
 gi|300897953|ref|ZP_07116330.1| polyprenyl synthetase [Escherichia coli MS 198-1]
 gi|300904377|ref|ZP_07122226.1| polyprenyl synthetase [Escherichia coli MS 84-1]
 gi|300918947|ref|ZP_07135503.1| polyprenyl synthetase [Escherichia coli MS 115-1]
 gi|300926070|ref|ZP_07141891.1| polyprenyl synthetase [Escherichia coli MS 182-1]
 gi|300929881|ref|ZP_07145324.1| polyprenyl synthetase [Escherichia coli MS 187-1]
 gi|300938101|ref|ZP_07152876.1| polyprenyl synthetase [Escherichia coli MS 21-1]
 gi|300948840|ref|ZP_07162906.1| polyprenyl synthetase [Escherichia coli MS 116-1]
 gi|300955774|ref|ZP_07168117.1| polyprenyl synthetase [Escherichia coli MS 175-1]
 gi|301022044|ref|ZP_07185986.1| polyprenyl synthetase [Escherichia coli MS 69-1]
 gi|301025932|ref|ZP_07189417.1| polyprenyl synthetase [Escherichia coli MS 196-1]
 gi|301301753|ref|ZP_07207887.1| polyprenyl synthetase [Escherichia coli MS 124-1]
 gi|301326382|ref|ZP_07219744.1| polyprenyl synthetase [Escherichia coli MS 78-1]
 gi|307139873|ref|ZP_07499229.1| octaprenyl diphosphate synthase [Escherichia coli H736]
 gi|307313108|ref|ZP_07592734.1| Trans-hexaprenyltranstransferase [Escherichia coli W]
 gi|309793766|ref|ZP_07688192.1| polyprenyl synthetase [Escherichia coli MS 145-7]
 gi|312968475|ref|ZP_07782684.1| polyprenyl synthetase family protein [Escherichia coli 2362-75]
 gi|312972539|ref|ZP_07786713.1| polyprenyl synthetase family protein [Escherichia coli 1827-70]
 gi|331643885|ref|ZP_08345016.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H736]
 gi|331648987|ref|ZP_08350075.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli M605]
 gi|331654791|ref|ZP_08355791.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli M718]
 gi|331670014|ref|ZP_08370859.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA271]
 gi|331679266|ref|ZP_08379938.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H591]
 gi|332279982|ref|ZP_08392395.1| octaprenyl diphosphate synthase [Shigella sp. D9]
 gi|83286883|sp|P0AD57|ISPB_ECOLI RecName: Full=Octaprenyl-diphosphate synthase; AltName:
           Full=All-trans-octaprenyl-diphosphate synthase; AltName:
           Full=Octaprenyl pyrophosphate synthase; Short=OPP
           synthase
 gi|83286884|sp|P0AD58|ISPB_SHIFL RecName: Full=Octaprenyl-diphosphate synthase; AltName:
           Full=All-trans-octaprenyl-diphosphate synthase; AltName:
           Full=Octaprenyl pyrophosphate synthase; Short=OPP
           synthase
 gi|606125|gb|AAA57988.1| ORF_o323 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789578|gb|AAC76219.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24053659|gb|AAN44693.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301]
 gi|30042784|gb|AAP18507.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T]
 gi|73857201|gb|AAZ89908.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046]
 gi|81246986|gb|ABB67694.1| octaprenyl diphosphate synthase [Shigella boydii Sb227]
 gi|85675981|dbj|BAE77231.1| octaprenyl diphosphate synthase [Escherichia coli str. K12 substr.
           W3110]
 gi|110616601|gb|ABF05268.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401]
 gi|157077135|gb|ABV16843.1| octaprenyl-diphosphate synthase [Escherichia coli E24377A]
 gi|169753491|gb|ACA76190.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
 gi|169890557|gb|ACB04264.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170125137|gb|EDS94068.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627]
 gi|188487414|gb|EDU62517.1| polyprenyl synthetase [Escherichia coli 53638]
 gi|194417271|gb|EDX33380.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012]
 gi|194421871|gb|EDX37877.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1]
 gi|209758174|gb|ACI77399.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|209913921|dbj|BAG78995.1| octaprenyl-diphosphate synthase [Escherichia coli SE11]
 gi|218353624|emb|CAU99827.1| octaprenyl diphosphate synthase [Escherichia coli 55989]
 gi|218362525|emb|CAR00149.1| octaprenyl diphosphate synthase [Escherichia coli IAI1]
 gi|218371942|emb|CAR19798.1| octaprenyl diphosphate synthase [Escherichia coli IAI39]
 gi|218433904|emb|CAR14821.1| octaprenyl diphosphate synthase [Escherichia coli UMN026]
 gi|238861931|gb|ACR63929.1| octaprenyl diphosphate synthase [Escherichia coli BW2952]
 gi|242378730|emb|CAQ33520.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
 gi|253323023|gb|ACT27625.1| Trans-hexaprenyltranstransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975030|gb|ACT40701.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606]
 gi|253979186|gb|ACT44856.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
 gi|257755963|dbj|BAI27465.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str.
           11368]
 gi|257766294|dbj|BAI37789.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str.
           11128]
 gi|260447786|gb|ACX38208.1| Polyprenyl synthetase [Escherichia coli DH1]
 gi|281180229|dbj|BAI56559.1| octaprenyl-diphosphate synthase [Escherichia coli SE15]
 gi|281602570|gb|ADA75554.1| Octaprenyl-diphosphate synthase [Shigella flexneri 2002017]
 gi|284923209|emb|CBG36303.1| octaprenyl-diphosphate synthase [Escherichia coli 042]
 gi|290764434|gb|ADD58395.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291426802|gb|EFE99834.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412]
 gi|298277677|gb|EFI19193.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302]
 gi|299879904|gb|EFI88115.1| polyprenyl synthetase [Escherichia coli MS 196-1]
 gi|300317358|gb|EFJ67142.1| polyprenyl synthetase [Escherichia coli MS 175-1]
 gi|300358334|gb|EFJ74204.1| polyprenyl synthetase [Escherichia coli MS 198-1]
 gi|300397718|gb|EFJ81256.1| polyprenyl synthetase [Escherichia coli MS 69-1]
 gi|300403684|gb|EFJ87222.1| polyprenyl synthetase [Escherichia coli MS 84-1]
 gi|300413928|gb|EFJ97238.1| polyprenyl synthetase [Escherichia coli MS 115-1]
 gi|300417874|gb|EFK01185.1| polyprenyl synthetase [Escherichia coli MS 182-1]
 gi|300451683|gb|EFK15303.1| polyprenyl synthetase [Escherichia coli MS 116-1]
 gi|300456907|gb|EFK20400.1| polyprenyl synthetase [Escherichia coli MS 21-1]
 gi|300462199|gb|EFK25692.1| polyprenyl synthetase [Escherichia coli MS 187-1]
 gi|300523616|gb|EFK44685.1| polyprenyl synthetase [Escherichia coli MS 119-7]
 gi|300529857|gb|EFK50919.1| polyprenyl synthetase [Escherichia coli MS 107-1]
 gi|300842734|gb|EFK70494.1| polyprenyl synthetase [Escherichia coli MS 124-1]
 gi|300846914|gb|EFK74674.1| polyprenyl synthetase [Escherichia coli MS 78-1]
 gi|306907019|gb|EFN37527.1| Trans-hexaprenyltranstransferase [Escherichia coli W]
 gi|308122723|gb|EFO59985.1| polyprenyl synthetase [Escherichia coli MS 145-7]
 gi|309703613|emb|CBJ02953.1| octaprenyl-diphosphate synthase [Escherichia coli ETEC H10407]
 gi|310334916|gb|EFQ01121.1| polyprenyl synthetase family protein [Escherichia coli 1827-70]
 gi|312286693|gb|EFR14604.1| polyprenyl synthetase family protein [Escherichia coli 2362-75]
 gi|313648570|gb|EFS13012.1| polyprenyl synthetase family protein [Shigella flexneri 2a str.
           2457T]
 gi|315062493|gb|ADT76820.1| octaprenyl diphosphate synthase [Escherichia coli W]
 gi|315137773|dbj|BAJ44932.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|315257114|gb|EFU37082.1| polyprenyl synthetase [Escherichia coli MS 85-1]
 gi|315617270|gb|EFU97879.1| polyprenyl synthetase family protein [Escherichia coli 3431]
 gi|320174552|gb|EFW49688.1| Octaprenyl-diphosphate synthase [Shigella dysenteriae CDC 74-1112]
 gi|320181462|gb|EFW56380.1| Octaprenyl-diphosphate synthase [Shigella boydii ATCC 9905]
 gi|320186674|gb|EFW61398.1| Octaprenyl-diphosphate synthase [Shigella flexneri CDC 796-83]
 gi|320194672|gb|EFW69302.1| Octaprenyl-diphosphate synthase [Escherichia coli WV_060327]
 gi|320202101|gb|EFW76676.1| Octaprenyl-diphosphate synthase [Escherichia coli EC4100B]
 gi|320656246|gb|EFX24158.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661936|gb|EFX29344.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|323154401|gb|EFZ40602.1| polyprenyl synthetase family protein [Escherichia coli EPECa14]
 gi|323165148|gb|EFZ50938.1| polyprenyl synthetase family protein [Shigella sonnei 53G]
 gi|323173553|gb|EFZ59182.1| polyprenyl synthetase family protein [Escherichia coli LT-68]
 gi|323178637|gb|EFZ64213.1| polyprenyl synthetase family protein [Escherichia coli 1180]
 gi|323183141|gb|EFZ68539.1| polyprenyl synthetase family protein [Escherichia coli 1357]
 gi|323189192|gb|EFZ74476.1| polyprenyl synthetase family protein [Escherichia coli RN587/1]
 gi|323376919|gb|ADX49187.1| Polyprenyl synthetase [Escherichia coli KO11]
 gi|323936119|gb|EGB32413.1| polyprenyl synthetase [Escherichia coli E1520]
 gi|323941713|gb|EGB37892.1| polyprenyl synthetase [Escherichia coli E482]
 gi|323946959|gb|EGB42975.1| polyprenyl synthetase [Escherichia coli H120]
 gi|323970250|gb|EGB65521.1| polyprenyl synthetase [Escherichia coli TA007]
 gi|323979096|gb|EGB74174.1| polyprenyl synthetase [Escherichia coli TW10509]
 gi|324018330|gb|EGB87549.1| polyprenyl synthetase [Escherichia coli MS 117-3]
 gi|324119552|gb|EGC13434.1| polyprenyl synthetase [Escherichia coli E1167]
 gi|330909241|gb|EGH37755.1| octaprenyl-diphosphate synthase [Escherichia coli AA86]
 gi|331037356|gb|EGI09580.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H736]
 gi|331042734|gb|EGI14876.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli M605]
 gi|331048173|gb|EGI20250.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli M718]
 gi|331062927|gb|EGI34841.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA271]
 gi|331073331|gb|EGI44654.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H591]
 gi|332086238|gb|EGI91396.1| polyprenyl synthetase family protein [Shigella boydii 5216-82]
 gi|332086522|gb|EGI91669.1| polyprenyl synthetase family protein [Shigella dysenteriae 155-74]
 gi|332090693|gb|EGI95787.1| polyprenyl synthetase family protein [Shigella boydii 3594-74]
 gi|332102334|gb|EGJ05680.1| octaprenyl diphosphate synthase [Shigella sp. D9]
 gi|332345144|gb|AEE58478.1| polyprenyl synthetase [Escherichia coli UMNK88]
 gi|332752346|gb|EGJ82736.1| polyprenyl synthetase family protein [Shigella flexneri 4343-70]
 gi|332752872|gb|EGJ83257.1| polyprenyl synthetase family protein [Shigella flexneri K-671]
 gi|332754473|gb|EGJ84839.1| polyprenyl synthetase family protein [Shigella flexneri 2747-71]
 gi|332765183|gb|EGJ95410.1| octaprenyl-diphosphate synthase [Shigella flexneri 2930-71]
 gi|332998829|gb|EGK18425.1| polyprenyl synthetase family protein [Shigella flexneri VA-6]
 gi|332999266|gb|EGK18852.1| polyprenyl synthetase family protein [Shigella flexneri K-272]
 gi|333000017|gb|EGK19600.1| polyprenyl synthetase family protein [Shigella flexneri K-218]
 gi|333014533|gb|EGK33880.1| polyprenyl synthetase family protein [Shigella flexneri K-304]
 gi|333014990|gb|EGK34334.1| polyprenyl synthetase family protein [Shigella flexneri K-227]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|254369351|ref|ZP_04985363.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122301|gb|EDO66441.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 325

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVILFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q+  +   R++ +G  LG  FQ+A
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|62260098|gb|AAX77879.1| unknown protein [synthetic construct]
          Length = 360

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 70  GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 127

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 128 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 180

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q+  +   R++ +G  LG  FQ+A
Sbjct: 181 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIA 240

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 241 DDVLDYVSD 249


>gi|26249771|ref|NP_755811.1| octaprenyl diphosphate synthase [Escherichia coli CFT073]
 gi|26110199|gb|AAN82385.1|AE016767_145 Octaprenyl-diphosphate synthase [Escherichia coli CFT073]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|88855944|ref|ZP_01130606.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1]
 gi|88814811|gb|EAR24671.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1]
          Length = 358

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 16/197 (8%)

Query: 44  RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L  GGK++R  L    A L + N+   +    A+E  H  SL HDD+  MD   +RR
Sbjct: 64  RYLLEAGGKRVRPVLTLLTAQLGSGNNANVVTAAQAVEITHLASLYHDDV--MDEAQLRR 121

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQGM 159
           G P+    +    AI+ G+ L   A ++I+    +   L+ N   +L L   H       
Sbjct: 122 GVPSAQSVWGNSVAILTGDLLFARASKLIAGLGERALILQSNTFERLCLGQLH------- 174

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              + L  +      T    +   KTG+L+  A E G + + A       +R FGE +G+
Sbjct: 175 ---ETLGPKPGENPVTHYLQVLADKTGSLIATAAEVGVMFSDAPDEYTVPVRDFGEKIGV 231

Query: 220 IFQLADDLLDCEEDLPK 236
            FQL DD++D  ++  K
Sbjct: 232 AFQLIDDVIDLSDETGK 248


>gi|238018911|ref|ZP_04599337.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748]
 gi|237864395|gb|EEP65685.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ L    A+         +R+  A+E +H  +LIHDD+  +D   IRRG+ T+H
Sbjct: 46  GGKRLRAQLCLLIANAGTSVERQRIRIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +      AI++G+ L   AF+I+S         I S ++  L           G+ + ++
Sbjct: 104 MHKGNKVAILSGDYLFAKAFQIVSEMPNMKYLQIFSHIITCLVE---------GEFMQME 154

Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + ID+    +M +  K  A     C E G ++   S++E   L+ +G  LG+ FQ+ D
Sbjct: 155 DVYRIDQGIDRYMTKTQKKTADFMEGCMELGGLLGGWSESEIVELKKYGHALGMAFQITD 214

Query: 226 DLLDCEE 232
           D++D  E
Sbjct: 215 DIMDYRE 221


>gi|71891880|ref|YP_277610.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71795986|gb|AAZ40737.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + +   IE IH  +L+HDD+  +D  ++RRG+ T +
Sbjct: 43  GGKRIRPMITLLTARALCYKKTQHVTIATLIEFIHTATLLHDDV--VDKSHMRRGRKTTN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
           I +    +++ G+ + T AF++++         + S  +LSL  +  +  +  G++L + 
Sbjct: 101 IIFGNAASVLVGDFIYTRAFQMMT--------ELESLRILSLMAD-AVNIIAAGEILQLT 151

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D  I       I   KT  L   A +S AI+A A+  +++ LR +G  +GI FQL D
Sbjct: 152 HCNDPTITIDSYMKIIYSKTARLFEVASQSSAILADANTCQEKALRNYGRYMGIAFQLVD 211

Query: 226 DLLD 229
           D+LD
Sbjct: 212 DVLD 215


>gi|254038351|ref|ZP_04872409.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
           sp. 1_1_43]
 gi|226839975|gb|EEH71996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
           sp. 1_1_43]
          Length = 340

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 60  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 118 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 171

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 172 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 231

Query: 229 DCEED 233
           D   D
Sbjct: 232 DYNAD 236


>gi|33151879|ref|NP_873232.1| octaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP]
 gi|33148100|gb|AAP95621.1| octaprenyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
          Length = 327

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         L   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALCYTGRKHLTCAAFIEFVHTATLLHDDV--VDESALRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      D++    ++S   N   +G +  Q+++I 
Sbjct: 105 AIFGNAASVLVGDFIYTRSFQMMTSV-----DSLEVLKVMSAATNALAEGEVQ-QLMNIN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A ASQ  ++ L+ +G  LG  FQL DD+L
Sbjct: 159 DPHTTEANYMRVIYNKTARLFEAATQCVAIVAGASQQIEQALKAYGCYLGTAFQLVDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|327333136|gb|EGE74863.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL097PA1]
          Length = 324

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV  C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ 
Sbjct: 46  GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++++    AI+ G+    Y F   S    +L  D ++ Q   + T +  +QG +      
Sbjct: 104 NLRWGNSVAIMVGD----YLFSRASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156

Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            Q +  D    ++ +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLAD
Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214

Query: 226 DLLD 229
           DL+D
Sbjct: 215 DLID 218


>gi|331664800|ref|ZP_08365705.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA143]
 gi|331058048|gb|EGI30030.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA143]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|301644900|ref|ZP_07244870.1| polyprenyl synthetase [Escherichia coli MS 146-1]
 gi|301076794|gb|EFK91600.1| polyprenyl synthetase [Escherichia coli MS 146-1]
          Length = 320

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|170683435|ref|YP_001745459.1| octaprenyl diphosphate synthase [Escherichia coli SMS-3-5]
 gi|170521153|gb|ACB19331.1| octaprenyl-diphosphate synthase [Escherichia coli SMS-3-5]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|121602666|ref|YP_988702.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
 gi|120614843|gb|ABM45444.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
          Length = 338

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMITLAAAHMFGYQGDEHIKLATAVEFMHTATLLHDDV--VDESNLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+I+   ++     I S     +     +Q      + +  
Sbjct: 115 MIWGNQASVLVGDFLLGQAFKIMVDARSMEALAILSNAAAVIAEGEVMQLAAANNIEN-- 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
               D +    I   KT AL   A E G I+A     E+  LR +G +LG+ FQL DD L
Sbjct: 173 ----DISNYLKIINAKTAALFSAAAEVGPIIAGYGCEERSALRKYGTSLGLAFQLIDDAL 228

Query: 229 DCEED 233
           D   D
Sbjct: 229 DYSGD 233


>gi|288800531|ref|ZP_06405989.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332744|gb|EFC71224.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 325

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 10/201 (4%)

Query: 34  QHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           +H D LLS +   +    GK++R  L+   A  F             +E +H  SL+HDD
Sbjct: 27  EHQDGLLSQVLMFIKQRSGKRMRPMLMLLVAKAFGRVSEVTQHAAIGLELLHTASLVHDD 86

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RRG+ +V+  YD   A++ G+ +L+ A   +S   +   D I S L   L 
Sbjct: 87  V--VDESGERRGQASVNAFYDNKVAVLVGDYILSTALLHVSFTSS---DRIVSGLA-ELG 140

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
             +    +L  Q+ +I ++ I E   + + K KT AL     E GA+   AS+++ E+ R
Sbjct: 141 RTLSDGEIL--QLENISNQTISEEAYYEVIKRKTAALFEACTEIGALSVGASKDDVEQAR 198

Query: 212 CFGENLGIIFQLADDLLDCEE 232
            FG +LG+ FQ+ DD+ D  E
Sbjct: 199 LFGLHLGMAFQIRDDIFDYYE 219


>gi|50549037|ref|XP_501989.1| YALI0C18755p [Yarrowia lipolytica]
 gi|60389562|sp|Q6CBH3|COQ1_YARLI RecName: Full=Probable hexaprenyl pyrophosphate synthase,
           mitochondrial; Short=HPS; Flags: Precursor
 gi|49647856|emb|CAG82309.1| YALI0C18755p [Yarrowia lipolytica]
          Length = 452

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 91/168 (54%), Gaps = 20/168 (11%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +DN   RRG PT ++ +    AI+AG+ LL  A   I+ 
Sbjct: 195 RLAEIVEMIHTASLLHDDV--IDNSATRRGSPTGNVAFGNKMAILAGDFLLGRASVAIA- 251

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQK--MK 184
              +L++    +L+ +   N     ++ G+ + +++  +D +++       + I K  +K
Sbjct: 252 ---RLRNAEVIELLSTTIAN-----LVEGEFMQLKNTIVDNSEIANKATFEYYIHKTYLK 303

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T +LM  +C + A+++ A     +    FG+NLG+ FQ+ DD+LD  E
Sbjct: 304 TASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSE 351


>gi|295097675|emb|CBK86765.1| Geranylgeranyl pyrophosphate synthase [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  S+ +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSEAQEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|239927463|ref|ZP_04684416.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
          Length = 342

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 51  GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T   D  R+   L+       + ++ GQ  DI 
Sbjct: 109 KVHGPAQAILVGDALFALANEVLLELGT--VDAGRAARRLTTAS----RALIDGQAQDIS 162

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 163 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVD 222

Query: 226 DLL 228
           DLL
Sbjct: 223 DLL 225


>gi|187931635|ref|YP_001891619.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712544|gb|ACD30841.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 325

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q+  +   R++ +G  LG  FQ+A
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|126458776|ref|YP_001055054.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248497|gb|ABO07588.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 334

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 34/208 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +     AL   A +E IH YSLI+DD+  +D G +RRG PTV 
Sbjct: 42  GGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVR 99

Query: 109 IQYDEVTAIIAGNGLLTY--AFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
             + +  AI+ G   + Y  A E  ++ +PK  L     ++++ ++           G+ 
Sbjct: 100 KAFGDNAAILVG---IWYREAIEEAVLDTPKPTLFAKEVAEVIKAIDE---------GER 147

Query: 165 LDIQDEFIDETQVFMIQ---------------KMKTGALMCFACESGAIMAHASQNEKER 209
           LDI  E    +  + +Q                +KTGAL+  A + G +     +   E 
Sbjct: 148 LDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEA 207

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPKK 237
              FG   G+ FQ+ DD+LD   D PKK
Sbjct: 208 AWNFGMAAGVAFQIIDDVLDIYGD-PKK 234


>gi|56708131|ref|YP_170027.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670602|ref|YP_667159.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301942|ref|YP_001121911.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|208779313|ref|ZP_03246659.1| polyprenyl synthetase family protein [Francisella novicida FTG]
 gi|224457222|ref|ZP_03665695.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370617|ref|ZP_04986622.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874931|ref|ZP_05247641.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604623|emb|CAG45677.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320935|emb|CAL09060.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049719|gb|ABO46790.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151568860|gb|EDN34514.1| hypothetical protein FTBG_00405 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|208745113|gb|EDZ91411.1| polyprenyl synthetase family protein [Francisella novicida FTG]
 gi|254840930|gb|EET19366.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159332|gb|ADA78723.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 325

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q+  +   R++ +G  LG  FQ+A
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|91212610|ref|YP_542596.1| octaprenyl diphosphate synthase [Escherichia coli UTI89]
 gi|110643427|ref|YP_671157.1| octaprenyl diphosphate synthase [Escherichia coli 536]
 gi|117625480|ref|YP_858803.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1]
 gi|191174477|ref|ZP_03035977.1| octaprenyl-diphosphate synthase [Escherichia coli F11]
 gi|218560257|ref|YP_002393170.1| octaprenyl diphosphate synthase [Escherichia coli S88]
 gi|218691477|ref|YP_002399689.1| octaprenyl diphosphate synthase [Escherichia coli ED1a]
 gi|227887908|ref|ZP_04005713.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972]
 gi|300980004|ref|ZP_07174826.1| polyprenyl synthetase [Escherichia coli MS 200-1]
 gi|300990877|ref|ZP_07179365.1| polyprenyl synthetase [Escherichia coli MS 45-1]
 gi|301047968|ref|ZP_07195012.1| polyprenyl synthetase [Escherichia coli MS 185-1]
 gi|331659474|ref|ZP_08360416.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA206]
 gi|91074184|gb|ABE09065.1| octaprenyl diphosphate synthase [Escherichia coli UTI89]
 gi|110345019|gb|ABG71256.1| octaprenyl-diphosphate synthase [Escherichia coli 536]
 gi|115514604|gb|ABJ02679.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1]
 gi|190905232|gb|EDV64871.1| octaprenyl-diphosphate synthase [Escherichia coli F11]
 gi|218367026|emb|CAR04797.1| octaprenyl diphosphate synthase [Escherichia coli S88]
 gi|218429041|emb|CAR09987.2| octaprenyl diphosphate synthase [Escherichia coli ED1a]
 gi|227835304|gb|EEJ45770.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972]
 gi|294490790|gb|ADE89546.1| octaprenyl-diphosphate synthase [Escherichia coli IHE3034]
 gi|300300164|gb|EFJ56549.1| polyprenyl synthetase [Escherichia coli MS 185-1]
 gi|300307867|gb|EFJ62387.1| polyprenyl synthetase [Escherichia coli MS 200-1]
 gi|300407044|gb|EFJ90582.1| polyprenyl synthetase [Escherichia coli MS 45-1]
 gi|307555280|gb|ADN48055.1| octaprenyl-diphosphate synthase [Escherichia coli ABU 83972]
 gi|307625214|gb|ADN69518.1| octaprenyl diphosphate synthase [Escherichia coli UM146]
 gi|315288960|gb|EFU48358.1| polyprenyl synthetase [Escherichia coli MS 110-3]
 gi|315294881|gb|EFU54220.1| polyprenyl synthetase [Escherichia coli MS 153-1]
 gi|315297896|gb|EFU57166.1| polyprenyl synthetase [Escherichia coli MS 16-3]
 gi|323951294|gb|EGB47169.1| polyprenyl synthetase [Escherichia coli H252]
 gi|323957666|gb|EGB53380.1| polyprenyl synthetase [Escherichia coli H263]
 gi|324008745|gb|EGB77964.1| polyprenyl synthetase [Escherichia coli MS 57-2]
 gi|324012137|gb|EGB81356.1| polyprenyl synthetase [Escherichia coli MS 60-1]
 gi|331054056|gb|EGI26085.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA206]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|187730997|ref|YP_001881898.1| octaprenyl diphosphate synthase [Shigella boydii CDC 3083-94]
 gi|187427989|gb|ACD07263.1| octaprenyl-diphosphate synthase [Shigella boydii CDC 3083-94]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|291086510|ref|ZP_06571551.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220]
 gi|291067630|gb|EFE05739.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220]
          Length = 498

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 218 GGKRIRPMIAVLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 275

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 276 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 329

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  S  +++ L+ +G  LG  FQL DDLL
Sbjct: 330 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSAEQEKGLQDYGRYLGTAFQLIDDLL 389

Query: 229 DCEED 233
           D   D
Sbjct: 390 DYSAD 394


>gi|258512777|ref|YP_003186211.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479503|gb|ACV59822.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 337

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 14/194 (7%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K++R  L+    +    +   AL    AIE +H +SLIHDD+   D   +RRG+ ++   
Sbjct: 55  KRVRPLLLLTAHAALGGDWRAALPAAVAIEYVHGFSLIHDDIE--DRSPLRRGRASLWAV 112

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQMLDI- 167
           +    A+ AG+ L   AF ++      L D+  ++ ++     +      +  GQ LD+ 
Sbjct: 113 WGVDRALNAGDALFALAFRVMGD----LADHFDARWVVETYQAMTDACIALSAGQELDLA 168

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             Q E +   Q   + ++KTGAL   A E  AI+A    + ++ LR  G  LG++FQ+ D
Sbjct: 169 FEQVENVSIEQYLAMAELKTGALFGAALEVAAILAGQPPSVRDDLRNAGRKLGVLFQILD 228

Query: 226 DLLDC---EEDLPK 236
           D  D    EEDL K
Sbjct: 229 DFHDLFGREEDLGK 242


>gi|150017812|ref|YP_001310066.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904277|gb|ABR35110.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 275

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GK +R  L+   A   N        +  + +  AIE IH  SL+HDD+  +DN   RRG+
Sbjct: 46  GKYLRPSLIILSAKAINPEMTIDERMKLINLCVAIELIHSASLVHDDI--IDNDLFRRGQ 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T++  Y    A++AG+     AF I+    T   + I +Q+         ++ M   ++
Sbjct: 104 KTLNNIYGRKIAVLAGDAFYAKAFSILLKLPTNDAEQIITQV---------IEKMCVAEI 154

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              Q+  I +   F I + KT + M   C+ GA   +A + E E L  +G NLG+++Q+ 
Sbjct: 155 EQAQNHEITKQDYFNIIEGKTASFMAACCKLGAKTVNAKEEEIEALENYGLNLGMLYQII 214

Query: 225 DDLLDCEEDLPK 236
           DD  D + +  K
Sbjct: 215 DDCTDGDSNATK 226


>gi|150003776|ref|YP_001298520.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482]
 gi|254880992|ref|ZP_05253702.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA]
 gi|294777401|ref|ZP_06742852.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
 gi|319640000|ref|ZP_07994727.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A]
 gi|149932200|gb|ABR38898.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482]
 gi|254833785|gb|EET14094.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA]
 gi|294448469|gb|EFG17018.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
 gi|317388278|gb|EFV69130.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A]
          Length = 324

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 20/186 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A LF   + + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILALLIAKLFGEINDSTLHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI 167
            Y+   +++ G+ +L           T LK +   R   ++ L   +G Q +  G+++ +
Sbjct: 103 IYNNKVSVLVGDYMLA----------TSLKHSAMTREITIVDLVACLG-QNLSEGEIIQL 151

Query: 168 QD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +    EF +E    +I+K KT AL   + E+GAI  HAS    +  R FGE +GI FQ+
Sbjct: 152 ANINASEFSEEVYYDVIRK-KTAALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQI 210

Query: 224 ADDLLD 229
            DD+ D
Sbjct: 211 KDDIFD 216


>gi|193065379|ref|ZP_03046450.1| octaprenyl-diphosphate synthase [Escherichia coli E22]
 gi|260846000|ref|YP_003223778.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str.
           12009]
 gi|192927020|gb|EDV81643.1| octaprenyl-diphosphate synthase [Escherichia coli E22]
 gi|257761147|dbj|BAI32644.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str.
           12009]
 gi|323162879|gb|EFZ48714.1| polyprenyl synthetase family protein [Escherichia coli E128010]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|157162671|ref|YP_001459989.1| octaprenyl diphosphate synthase [Escherichia coli HS]
 gi|157068351|gb|ABV07606.1| octaprenyl-diphosphate synthase [Escherichia coli HS]
          Length = 323

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVISEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|237706062|ref|ZP_04536543.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia
           sp. 3_2_53FAA]
 gi|226899102|gb|EEH85361.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia
           sp. 3_2_53FAA]
          Length = 340

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 60  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 118 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 171

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 172 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 231

Query: 229 DCEED 233
           D   D
Sbjct: 232 DYNAD 236


>gi|119897305|ref|YP_932518.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72]
 gi|119669718|emb|CAL93631.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72]
          Length = 341

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A           R+ A +E IH  +L+HDD+  +D   +RRG  T +
Sbjct: 62  GGKRLRPALVLFSAGAVGYRGTQHHRLAAVVEFIHTSTLLHDDV--VDESELRRGNKTAN 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++        D++R   +L+   NI  +G +  Q+L+  
Sbjct: 120 ALFGNAASVLVGDFLYTRAFQMMVE-----VDSMRVMQILADATNIIAEGEVL-QLLNCH 173

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  ++      + + KT  L   A   GA++  A    +E +  FG +LG  FQL DD+L
Sbjct: 174 NADVEVEDYLRVIRYKTAKLFEAASRLGAVLGGADPALEESMAAFGMHLGTAFQLIDDVL 233

Query: 229 DCEED 233
           D   D
Sbjct: 234 DYSAD 238


>gi|75676776|ref|YP_319197.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74421646|gb|ABA05845.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 336

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ A++E +H  +L+HDD+  +D   +RRG+ +  
Sbjct: 55  GGKRLRPMLTLAMANLAGYAGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGRLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    +I S    ++     +Q          +
Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE++       + + KT  L   ACE G ++    + E+     FG NLGI FQL DD+L
Sbjct: 173 DEYL------AVIRGKTAELFAAACEVGPVLGGRPKAEQTAAASFGMNLGIAFQLVDDVL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|257487512|ref|ZP_05641553.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 322

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|241763806|ref|ZP_04761852.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
 gi|241366938|gb|EER61343.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
          Length = 309

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 12/183 (6%)

Query: 49  GGKKIR-SFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R + L+  C +L +  NH  +L   A +E IH  +L+HDD+  +D   +RRG+ T
Sbjct: 30  GGKRLRPALLLLICGALGYRGNHRFSL--AAVVELIHTATLLHDDV--VDASTLRRGRAT 85

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +    +++ G+ L T +F+++         N+R   +LS   N+  +G +  Q+++
Sbjct: 86  ANQTFGNPASVLVGDFLHTRSFQMMVE-----AGNMRIMEVLSEATNVIAEGEVL-QLMN 139

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + D  +DE     + + KT  L   +   GAI+A +    +E    +G+ LG  FQ+ DD
Sbjct: 140 MHDASLDEAGYLQVIRSKTAKLFEASARLGAILAESPPQIEEACATYGQALGTAFQIIDD 199

Query: 227 LLD 229
           +LD
Sbjct: 200 VLD 202


>gi|319775186|ref|YP_004137674.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047]
 gi|317449777|emb|CBY85984.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047]
          Length = 329

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|301169600|emb|CBW29201.1| octaprenyl diphosphate synthase [Haemophilus influenzae 10810]
          Length = 329

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|212692554|ref|ZP_03300682.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855]
 gi|237709128|ref|ZP_04539609.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA]
 gi|237724389|ref|ZP_04554870.1| octaprenyl-diphosphate synthase [Bacteroides sp. D4]
 gi|265752655|ref|ZP_06088224.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA]
 gi|212664839|gb|EEB25411.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855]
 gi|229437258|gb|EEO47335.1| octaprenyl-diphosphate synthase [Bacteroides dorei 5_1_36/D4]
 gi|229456824|gb|EEO62545.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA]
 gi|263235841|gb|EEZ21336.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA]
          Length = 324

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 20/186 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A LF   + + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILALLIAKLFGEINDSTLHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI 167
            Y+   +++ G+ +L           T LK +   R   ++ L   +G Q +  G+++ +
Sbjct: 103 IYNNKVSVLVGDYMLA----------TSLKHSAMTREITIVDLVACLG-QNLSEGEIIQL 151

Query: 168 QD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +    EF +E    +I+K KT AL   + E+GAI  HAS    +  R FGE +GI FQ+
Sbjct: 152 ANINASEFSEEVYYDVIRK-KTAALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQI 210

Query: 224 ADDLLD 229
            DD+ D
Sbjct: 211 KDDIFD 216


>gi|16272821|ref|NP_439042.1| octaprenyl-diphosphate synthase [Haemophilus influenzae Rd KW20]
 gi|260579972|ref|ZP_05847802.1| heptaprenyl diphosphate synthase component II [Haemophilus
           influenzae RdAW]
 gi|1170590|sp|P44916|ISPB_HAEIN RecName: Full=Octaprenyl-diphosphate synthase; AltName:
           Full=All-trans-octaprenyl-diphosphate synthase; AltName:
           Full=Octaprenyl pyrophosphate synthase; Short=OPP
           synthase
 gi|1573899|gb|AAC22540.1| octaprenyl-diphosphate synthase (ispB) [Haemophilus influenzae Rd
           KW20]
 gi|260093256|gb|EEW77189.1| heptaprenyl diphosphate synthase component II [Haemophilus
           influenzae RdAW]
 gi|309751451|gb|ADO81435.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2866]
          Length = 329

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|303238014|ref|ZP_07324557.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
 gi|302481804|gb|EFL44856.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
          Length = 325

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A  F      A      +E +H  SL+HDD+  +D    RRG+ +++
Sbjct: 44  GGKRMRPLLMLLMAKNFGEVTFVAQHAAIGLELLHTASLVHDDV--VDESVQRRGQASMN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y+   A++ G+ +L+ A  +++   TQ  D +R    L  T + G   +L  Q+ +I 
Sbjct: 102 ATYNNKVAVLVGDYILSTA--LLNVAYTQSDDIVRDLAELGRTLSNG--EIL--QLTNIS 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           ++ I E   + +   KT AL       GA    AS+   E  R FG+ +GIIFQ+ DD+ 
Sbjct: 156 NQEISEEVYYQVINQKTAALFEACAVIGAKAGRASEEAIEAARLFGQRIGIIFQIRDDIF 215

Query: 229 D 229
           D
Sbjct: 216 D 216


>gi|253998223|ref|YP_003050286.1| trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4]
 gi|253984902|gb|ACT49759.1| Trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4]
          Length = 322

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F   +     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPALVLLSAGAFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + + AF+++   ++     +R   +L+   NI  +G +  Q+L++ 
Sbjct: 101 TLFGNAASVLVGDFIYSRAFQMMVGVES-----MRVMEVLAEATNIIAEGEVL-QLLNVH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I +     +   KT  L   A   GAI+  AS+ +++ +  +G  LG  FQL DD+L
Sbjct: 155 DADITDEAYLKVIHYKTAKLFEAATRLGAIICAASEQDEQAMAEYGMRLGTAFQLIDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DFSGD 219


>gi|261493062|ref|ZP_05989602.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496350|ref|ZP_05992745.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261307994|gb|EEY09302.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311282|gb|EEY12445.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 335

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE +H  +L+HDD+  +D   +RRG+PT +
Sbjct: 51  GGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDV--VDESDMRRGRPTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N   +G +  Q++++ 
Sbjct: 109 AHFGNAASVLVGDFIYTRSFQMMTD-----LDSLRVLKVMSAATNALAEGEVQ-QLMNVN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A AS+  +  L+ +G  LG  FQL DD+L
Sbjct: 163 DPNTTEANYMRVIYNKTARLFEAATQCVAIVADASEEIETALKNYGCYLGTAFQLIDDIL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|68249468|ref|YP_248580.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP]
 gi|329122893|ref|ZP_08251464.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116]
 gi|68057667|gb|AAX87920.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP]
 gi|327471824|gb|EGF17264.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116]
          Length = 329

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|289625167|ref|ZP_06458121.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289651351|ref|ZP_06482694.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|298485383|ref|ZP_07003473.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298160081|gb|EFI01112.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330869163|gb|EGH03872.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330988777|gb|EGH86880.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 322

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|254439584|ref|ZP_05053078.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
 gi|198255030|gb|EDY79344.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
          Length = 332

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 9/200 (4%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M ++H  R+     + +  GGK++R  L    A +   +    + + A +E IH  +L+H
Sbjct: 33  MASKHAPRIPEVTAHLVGAGGKRLRPMLTLAAAKMCGYSGPYHVHLAATVEFIHTATLLH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +    +I +    +
Sbjct: 93  DDV--VDESAQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGSLRVLDILANASAT 150

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     LQ      +    D    E     I + KT AL   A E G ++A       E 
Sbjct: 151 IAEGEVLQ------LTAASDLATTEAIYLQIVRGKTAALFSAAMEVGGVIAGQDAALVEA 204

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L  +G+ LGI FQ+ DDLLD
Sbjct: 205 LYDYGDALGIGFQIVDDLLD 224


>gi|86739535|ref|YP_479935.1| polyprenyl synthetase [Frankia sp. CcI3]
 gi|86566397|gb|ABD10206.1| Polyprenyl synthetase [Frankia sp. CcI3]
          Length = 338

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A        T L    A+E +H +SL+HDDL  MD    RR +PT  
Sbjct: 53  GGKLVRPALALLSAQAAGAPAETGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + + +   R+ L+L      G+Q ++ GQ  D+ 
Sbjct: 111 TIFGADGAILAGDALLGLATQVLL--EVEGEPGRRAALIL----GAGVQDLVRGQAEDLM 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     ++  KTGAL+  +   GA++A A  +    L  +G  LG  FQL D
Sbjct: 165 FEKRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAGDDMVNALAEYGSRLGTAFQLID 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|170783303|ref|YP_001711637.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169157873|emb|CAQ03081.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 325

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 17/198 (8%)

Query: 44  RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L  GGK++R  L    A L   N    +    AIE  H  SL HDD+  MD   +RR
Sbjct: 32  RYLLDAGGKRVRPMLALLIAQLGEGNTQQVVDAAVAIEITHLASLYHDDV--MDEADMRR 89

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGM 159
           G P+    +    AI+AG+ L   A +I++   P+  +L+     +L+L   H     G 
Sbjct: 90  GVPSAQAVWGNSVAILAGDLLFARASKIVADLGPRAIRLQAATFERLVLGQLHET--IGP 147

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             GQ  D  + ++D      +   KTG+L+  A + G I + A    +  +  FGE  G+
Sbjct: 148 REGQ--DPIEHYLD------VLADKTGSLIACAAQMGVIYSGADPELESAVLAFGERTGV 199

Query: 220 IFQLADDLLDCEEDLPKK 237
            FQL DD+LD   D P++
Sbjct: 200 AFQLVDDVLDL-ADQPEE 216


>gi|71735497|ref|YP_273004.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556050|gb|AAZ35261.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 322

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|297518736|ref|ZP_06937122.1| octaprenyl diphosphate synthase [Escherichia coli OP50]
          Length = 286

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 6   GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 63

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 64  AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 117

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 118 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 177

Query: 229 DCEED 233
           D   D
Sbjct: 178 DYNAD 182


>gi|255945077|ref|XP_002563306.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588041|emb|CAP86112.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 447

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ +L  A   ++ 
Sbjct: 189 RLAEITELIHTASLLHDDV--IDNAVTRRANSSANLAFGNKMAVLAGDFMLGRASVALA- 245

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187
              +L+D   ++LM ++  N+ ++G         QDE    + DET  + +QK  +KT +
Sbjct: 246 ---RLRDPEVTELMATVIANL-VEGEFMQLKNTAQDESKPVYTDETLSYYLQKTYLKTAS 301

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C S A++  ++    E    +G NLG+ FQL DD+LD
Sbjct: 302 LISKSCRSAAVLGRSAPEVIEASYAYGRNLGLAFQLVDDMLD 343


>gi|115402649|ref|XP_001217401.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus
           NIH2624]
 gi|114189247|gb|EAU30947.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus
           NIH2624]
          Length = 449

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 21/169 (12%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+    E IH  SL+HDD+  +DN   RR   + ++Q+    A++AG+ LL  A   
Sbjct: 188 TQRRLAEITELIHTASLLHDDV--IDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVA 245

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK 182
           ++    +L+D   ++L+ ++  N     ++ G+ + ++    DE    F DET  + +QK
Sbjct: 246 LA----RLRDPEVTELLATVIAN-----LVEGEFMQLKNTAADEKHPVFTDETIEYYLQK 296

Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +KT +L+  +C + A++  ++    E    +G NLG+ FQL DD+LD
Sbjct: 297 TYLKTASLISKSCRAAALLGDSTPEVVESAYAYGRNLGLAFQLVDDMLD 345


>gi|302522954|ref|ZP_07275296.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
 gi|302431849|gb|EFL03665.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
          Length = 377

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +   +  T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 81  GGKAVRPALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+     +L      +    LT     + ++ GQ  DI 
Sbjct: 139 KVHGPAQAILVGDALFALANEIL----LELGTPEAGRATRRLTR--ATRALIDGQAQDIS 192

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 193 YEHRDRVTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVD 252

Query: 226 DLL 228
           DLL
Sbjct: 253 DLL 255


>gi|320326220|gb|EFW82274.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330645|gb|EFW86622.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330881372|gb|EGH15521.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330891602|gb|EGH24263.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 322

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|224823689|ref|ZP_03696798.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
 gi|224604144|gb|EEG10318.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
          Length = 360

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L        +        + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 81  GGKRLRPVLTLLAGKALDYRGEHLHELAAMIEFIHTATLLHDDV--VDESELRRGRETAN 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++ + +     N+    +++   NI  +G +  Q+L+I 
Sbjct: 139 ALFGNAASVLVGDFLYTRAFQMMVTTR-----NMAILEVMAEATNIIAEGEVL-QLLNIG 192

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E Q   + + KT  L   A   GA++A AS  +++ L  +G +LG  FQ+ DD+L
Sbjct: 193 NTDVTEAQYLQVIQYKTAKLFEAASRVGALIAAASPEQEKALADYGMHLGTAFQIIDDVL 252

Query: 229 DCEED 233
           D   D
Sbjct: 253 DYSGD 257


>gi|145638300|ref|ZP_01793910.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittII]
 gi|145272629|gb|EDK12536.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittII]
          Length = 323

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|315081026|gb|EFT53002.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1]
          Length = 324

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV  C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ 
Sbjct: 46  GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++++    AI+ G+    Y F   S    +L  D ++ Q   + T +  +QG +      
Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156

Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            Q +  D    ++ +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLAD
Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAIFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214

Query: 226 DLLD 229
           DL+D
Sbjct: 215 DLID 218


>gi|302877611|ref|YP_003846175.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
 gi|302580400|gb|ADL54411.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
          Length = 320

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  FN        + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 41  GGKRLRPALVVLSAHAFNYTGEHHHELAAVVEFIHTATLLHDDV--VDESGLRRGRETAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++    +     +R    L+   N+  +G +  Q+L+  
Sbjct: 99  ALFGNAASVLVGDFLYSRAFQMMVEVGS-----MRVMQTLADATNVIAEGEVL-QLLNCN 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +D      +   KT  L   A   GAI+A  S  ++     +G +LG  FQL DD+L
Sbjct: 153 DADVDAENYMRVIHYKTAKLFEAAMRLGAILAKTSSEDEAAAATYGMHLGTAFQLIDDVL 212

Query: 229 DCEED 233
           D   D
Sbjct: 213 DYSAD 217


>gi|189425336|ref|YP_001952513.1| polyprenyl synthetase [Geobacter lovleyi SZ]
 gi|189421595|gb|ACD95993.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
          Length = 322

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  ++   A L       A+ + + +E IH  +L+HDD+  +D+  +RRG  + +
Sbjct: 41  GGKRIRPAMLLLAARLCEYQGNQAIPLASVVEFIHTATLLHDDV--VDSATLRRGLASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++ +  +     + S+    +     LQ +  G++   +
Sbjct: 99  TLWGNEASVLIGDFLFSKSFSLMVAAGSLDVLRVMSKATTVIAEGEVLQLLYTGEVELTE 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            ++I+      + + KT  L+  AC+ GAI+   S  +++ L  FG  LGI FQL DD+L
Sbjct: 159 QQYIE------VVRAKTAVLLSAACQCGAILGGVSPEQEQALADFGMELGIAFQLMDDIL 212

Query: 229 D---CEEDLPK 236
           D    EE+  K
Sbjct: 213 DYTASEEEFGK 223


>gi|148556350|ref|YP_001263932.1| polyprenyl synthetase [Sphingomonas wittichii RW1]
 gi|148501540|gb|ABQ69794.1| Polyprenyl synthetase [Sphingomonas wittichii RW1]
          Length = 341

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA L +       ++ A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 60  GGKRMRPMLTLACAKLLDYAGERHHKLAATVEFIHTATLLHDDV--VDQSGLRRGRSTAN 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L + +FE++         ++R   +LS    +  +G +  Q+   +
Sbjct: 118 MIWGNAASVLVGDFLFSRSFELMVE-----DGSLRVLRILSNASAVIAEGEVN-QLTAQR 171

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E +   I   KT  L   AC   A++A      +E L  +G  LGI FQL DD++
Sbjct: 172 RIETSEERYLEIIAAKTAVLFAAACRIAAVVAEREPAVEEALDQYGRYLGIAFQLVDDVI 231

Query: 229 DCEED 233
           D   D
Sbjct: 232 DYVSD 236


>gi|145629957|ref|ZP_01785739.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021]
 gi|145634043|ref|ZP_01789754.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA]
 gi|145636989|ref|ZP_01792653.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittHH]
 gi|145641936|ref|ZP_01797510.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae R3021]
 gi|148828062|ref|YP_001292815.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG]
 gi|229844760|ref|ZP_04464899.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1]
 gi|144984238|gb|EDJ91661.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021]
 gi|145268487|gb|EDK08480.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA]
 gi|145269847|gb|EDK09786.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittHH]
 gi|145273415|gb|EDK13287.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae 22.4-21]
 gi|148719304|gb|ABR00432.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG]
 gi|229812474|gb|EEP48164.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1]
          Length = 323

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|124026920|ref|YP_001012240.1| geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus
           DSM 5456]
 gi|123977614|gb|ABM79895.1| Geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus
           DSM 5456]
          Length = 312

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 27/229 (11%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L E+ K++ +++DD + Q  + +   H  R+     Y   GGK+ R FLV E A      
Sbjct: 11  LVEHWKKLRSLVDDAIKQWIARLPEAHAVRVAE---YIARGGKRFRGFLVLEIARSLGGR 67

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL    A+E IH  SL  DD+  +D    RRG+    ++Y     ++    L+T+A 
Sbjct: 68  IEDALDAAVAVELIHASSLALDDI--IDEDVERRGQKAAWVEYGVKKTVMTVYLLVTFAH 125

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEFIDETQVFMIQ 181
           +I+   +   +   R+   ++ T NI       G++LD       +  E+  ET      
Sbjct: 126 KIVEE-RYGFRATSRT---ITATLNISR-----GEVLDAFTDPDSLPPEYYLET-----V 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           K+KT +L   A E GAI+A   ++       +GE LG+++Q+ADD++D 
Sbjct: 172 KLKTASLFRLAGELGAIVA-GREDLYGEAGLYGEYLGLMYQVADDIVDS 219


>gi|257069301|ref|YP_003155556.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
 gi|256560119|gb|ACU85966.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
          Length = 335

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 21/191 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   ASL +++          +E  H  SL HDD+  MD+   RRG  + H
Sbjct: 52  GGKRVRPMLVLLAASLGDIDADGVQDAAVLVELTHLASLYHDDV--MDSAPTRRGTDSAH 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             +    AI+ G+ L   A  + +   T   D +R        H+   + +  GQ+ +  
Sbjct: 110 ALWGNNVAILTGDFLFARASGLSARIGT---DAVRE-------HSETFERLCLGQLHETV 159

Query: 168 -----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
                 D F        +   KT +L+  A   GA ++ A Q   + +R +GE +G+ FQ
Sbjct: 160 GPKPGDDPF---AHYISVLSDKTASLLALAGSLGASLSGAPQGSADVMRRYGEKVGVAFQ 216

Query: 223 LADDLLDCEED 233
           LADD+LD E D
Sbjct: 217 LADDVLDLESD 227


>gi|145245453|ref|XP_001394994.1| hexaprenyl pyrophosphate synthase [Aspergillus niger CBS 513.88]
 gi|134079694|emb|CAK97120.1| unnamed protein product [Aspergillus niger]
          Length = 450

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 21/169 (12%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+    E IH  SL+HDD+  +DN   RR   + ++Q+    A++AG+ +L  A   
Sbjct: 189 TQRRLAEITELIHTASLLHDDV--IDNAVSRRSLTSANLQFGNKMAVLAGDFMLGRASVA 246

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK 182
           ++    +L+D    +LM ++  N     ++ G+ + ++    DE    F D+T  + +QK
Sbjct: 247 LA----RLRDPEVIELMSTVITN-----LVEGEFMQLKNTAADEKNPVFTDDTLSYYLQK 297

Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +KTG+L+  +C S A++ H++    E    +G NLG+ FQL DD+LD
Sbjct: 298 TYLKTGSLISKSCRSTAVLGHSAPEVVEASYQYGRNLGLAFQLVDDMLD 346


>gi|319795463|ref|YP_004157103.1| polyprenyl synthetase [Variovorax paradoxus EPS]
 gi|315597926|gb|ADU38992.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
          Length = 330

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 14/209 (6%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           L T   + +Q +  ++SA      GGK++R  L+   +            + A +E IH 
Sbjct: 33  LDTGVPLVSQVSQYIISA------GGKRLRPALLLLMSGALGYTGEQRFNLAAVVEFIHT 86

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + AF+++        +NIR 
Sbjct: 87  ATLLHDDV--VDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLD-----ANNIRV 139

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             +L+   N+  +G +  Q++++ D  +DET    + + KT  L   +    A++A  + 
Sbjct: 140 MEILAEATNVIAEGEVL-QLMNMHDASLDETAYLRVIRSKTAKLFEASTRLAAVLAGVTP 198

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +E    +G+ LG  FQ+ DD+LD   D
Sbjct: 199 EVEEACATYGQALGTAFQVIDDVLDYAGD 227


>gi|309973622|gb|ADO96823.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2846]
          Length = 329

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGANSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILGIMADATNVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|325132994|gb|EGC55670.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M6190]
 gi|325136902|gb|EGC59499.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M0579]
 gi|325138982|gb|EGC61531.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ES14902]
          Length = 324

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++        D++R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|319404558|emb|CBI78164.1| octaprenyl-diphosphate synthase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 337

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 56  GGKRIRPMITLATAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESALRRGKSTAR 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +I+ G+ LL  AF+++         ++ S   LS+  N     +  G+++ + 
Sbjct: 114 IIWGNQASILVGDFLLGQAFKMMV--------DVGSLDALSVLSNAAAI-IAEGEVMQLS 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                ET V     I   KT AL   A E G I+A     E+  L  +G +LG+ FQL D
Sbjct: 165 AAKNIETNVSDYLKIINAKTAALFSAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLID 224

Query: 226 DLLD 229
           D+LD
Sbjct: 225 DVLD 228


>gi|313819453|gb|EFS57167.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2]
          Length = 324

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV  C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ 
Sbjct: 46  GGKRFRPLLVVLCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++++    AI+ G+    Y F   S    +L  D ++ Q   + T +  +QG +      
Sbjct: 104 NLRWGNSVAIMVGD----YLFSKASLAVAELGVDFVKLQ---ARTFSRLVQGQIAETRGP 156

Query: 167 IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            Q +  D    ++ +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLAD
Sbjct: 157 SQGQ--DPLAHYLKVVADKTGSLIAASAIFGAMVSHASAENVAALEQFGEDIGEVFQLAD 214

Query: 226 DLLD 229
           DL+D
Sbjct: 215 DLID 218


>gi|333023207|ref|ZP_08451271.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
 gi|332743059|gb|EGJ73500.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
          Length = 377

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +   +  T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 81  GGKAVRPALALISAEVTGASAGTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+     +L      +    LT     + ++ GQ  DI 
Sbjct: 139 KVHGPAQAILVGDALFALANEIL----LELGTPEAGRATRRLTRAT--RALIDGQAQDIS 192

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 193 YEHRDRVTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVD 252

Query: 226 DLL 228
           DLL
Sbjct: 253 DLL 255


>gi|255326766|ref|ZP_05367842.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia
           mucilaginosa ATCC 25296]
 gi|255295983|gb|EET75324.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia
           mucilaginosa ATCC 25296]
          Length = 353

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 20/221 (9%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           RI+  L + + QT  H+    +  LLSA      GGK++R  L   CA++    +   + 
Sbjct: 44  RIEERLAEAIAQT-DHLADVASRHLLSA------GGKRVRPLLALLCAAVDGEINDEVIE 96

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E  H  +L HDD+  MD+   RRG  +  + +    AI+ G+ + + A  ++S  
Sbjct: 97  AAVVVELTHLATLYHDDV--MDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVSEL 154

Query: 135 KTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
            T+    I+SQ    L L       G   GQ  D+ D +I       + + KTG+L+  A
Sbjct: 155 GTRPM-KIQSQTFERLVLGQLFETTGPREGQ--DLLDHYI------AVIEGKTGSLIAAA 205

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            E G++++ AS++    ++ +GE +G+ FQLADD++D   D
Sbjct: 206 GEYGSLLSGASEDIISMVKAYGELVGVAFQLADDVIDIVSD 246


>gi|121635537|ref|YP_975782.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18]
 gi|120867243|emb|CAM11012.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18]
          Length = 324

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++        D++R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|283788174|ref|YP_003368039.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168]
 gi|282951628|emb|CBG91328.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168]
          Length = 323

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  S  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSDAQEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|187476774|ref|YP_784798.1| octaprenyl-diphosphate synthase [Bordetella avium 197N]
 gi|115421360|emb|CAJ47865.1| octaprenyl-diphosphate synthase [Bordetella avium 197N]
          Length = 321

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPAMVLMVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++        +++R   +LS    +  +G +  Q+L++ 
Sbjct: 101 AVFGNAASVLVGDYLYSRSFEMMVE-----ANSMRIMQILSEATTVIAEGEVL-QLLNVH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + + +   + + KT  L   A + GA++A A+  ++     +G ++G  FQL DD+L
Sbjct: 155 DPEVSQERYLQVVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHIGTAFQLIDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSGD 219


>gi|171059952|ref|YP_001792301.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
 gi|170777397|gb|ACB35536.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
          Length = 313

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 8/183 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A   + +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 34  GGKRIRPLLVLLFARALDFDGPERFEMAATVEFIHTATLLHDDV--VDESDLRRGRKTAN 91

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ S      + +R   +L+   N+  +G +  Q+L++ 
Sbjct: 92  AIFGNAASVLVGDFLYSRAFQMMVS-----VNRLRVLDVLADATNVIAEGEVL-QLLNMH 145

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I       + + KT  L   +  +GA++A  S   ++    +G  LG  FQL DDLL
Sbjct: 146 DPDISIEAYLRVIRYKTAKLFEASARTGAVLAGVSAPLEDSCASYGRCLGTAFQLIDDLL 205

Query: 229 DCE 231
           D E
Sbjct: 206 DYE 208


>gi|254363100|ref|ZP_04979154.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213]
 gi|153094987|gb|EDN75550.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213]
          Length = 315

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE +H  +L+HDD+  +D   +RRG+PT +
Sbjct: 31  GGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDV--VDESDMRRGRPTAN 88

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N   +G +  Q++++ 
Sbjct: 89  AHFGNAASVLVGDFIYTRSFQMMTD-----LDSLRVLKVMSAATNALAEGEVQ-QLMNVN 142

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI A AS+  +  L+ +G  LG  FQL DD+L
Sbjct: 143 DPNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQLIDDIL 202

Query: 229 D 229
           D
Sbjct: 203 D 203


>gi|156742295|ref|YP_001432424.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156233623|gb|ABU58406.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 349

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ LV  CA L   +   AL    AIE +H  SLIHDDL  +D+   RRG  TVH
Sbjct: 71  GGKRLRAALVLLCARLGMYDPSRALHPAIAIELLHAASLIHDDL--VDHAGQRRGHVTVH 128

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---L 165
            ++D   A++ G+    Y F + ++      D       +   +    Q M+ G++    
Sbjct: 129 SRWDADVALLLGD----YFFALAANELAAEPDP-----RIIAFYTSAAQTMVEGELNPVT 179

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            I+   I   Q +     KT  L   AC++G  +A     + E L  FG +LG+ FQ+ D
Sbjct: 180 QIEPLAIAVEQYYRKIGCKTAVLFEAACKAGIAVAGGDDAQIETLGRFGYDLGLAFQIVD 239

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 240 DVLDYTGD 247


>gi|332678210|gb|AEE87339.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Francisella cf.
           novicida Fx1]
          Length = 325

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N +    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVMLFARALNYSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q   N ++ +R +G  LG  FQ+A
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|254374334|ref|ZP_04989816.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548]
 gi|151572054|gb|EDN37708.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548]
          Length = 325

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N +    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVMLFARALNYSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q   N ++ +R +G  LG  FQ+A
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|119719519|ref|YP_920014.1| geranyltranstransferase [Thermofilum pendens Hrk 5]
 gi|119524639|gb|ABL78011.1| Geranyltranstransferase [Thermofilum pendens Hrk 5]
          Length = 337

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 36/248 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  +  +L E    +D +++  LL+ AS    +  D +L  +R   +GGK++R  L   
Sbjct: 1   MSARVLERLGEIGALVDPVMEKYLLRGAS---PEFQDAVLYQVR---MGGKRVRPALTIA 54

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                      AL   AA+E  H YSLI DD+  +D+  +RRGKPTV  +Y   TAI+  
Sbjct: 55  STLAVGGKEENALPAAAAVELAHNYSLILDDI--IDHSELRRGKPTVWKKYGISTAILIA 112

Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ 176
                   E ++ +P+  +   I ++ +  LT          G+ LDI   Q    DE  
Sbjct: 113 VHYRESITEALNDTPEPPVFHAIMAETIKLLTD---------GERLDILFEQSGRSDEPY 163

Query: 177 VF--------------MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           V               MI++ KT  L+  +C  GA+ A       E LR +G NLG+ FQ
Sbjct: 164 VVEQRYRAVRLDDYLRMIER-KTAKLIETSCVFGALSAGQRGEILEALREYGYNLGMAFQ 222

Query: 223 LADDLLDC 230
           + DD++D 
Sbjct: 223 VGDDIIDI 230


>gi|261878883|ref|ZP_06005310.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361]
 gi|270334523|gb|EFA45309.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361]
          Length = 325

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 32/208 (15%)

Query: 35  HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H D LLS +        GK++R  L+   A  +     T L     +E +H  SL+HDD+
Sbjct: 28  HTDGLLSQVLDHVRQRAGKRMRPILILLMAKNYGQITSTTLNAAVGLELLHTASLMHDDV 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG+ +V+ +Y+   A++AG+ +L+ A                  L ++ TH
Sbjct: 88  --VDESEERRGQASVNAEYNNKVAVLAGDYVLSTAL-----------------LHVNFTH 128

Query: 153 NIGL--------QGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           N  +        + +  G++L    IQ++ I ET  + +   KT AL     E GA+ A 
Sbjct: 129 NEAIIETLAELGRTLSNGEILQLSAIQNQSISETTYYDVISQKTAALFEACAEVGALSAG 188

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           A      + R FG N+GIIFQ+ DD+ D
Sbjct: 189 ADAAATTQARNFGRNIGIIFQIRDDIFD 216


>gi|197287216|ref|YP_002153088.1| octaprenyl diphosphate synthase [Proteus mirabilis HI4320]
 gi|227357090|ref|ZP_03841460.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906]
 gi|194684703|emb|CAR46670.1| octaprenyl-diphosphate synthase [Proteus mirabilis HI4320]
 gi|227162782|gb|EEI47745.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906]
          Length = 323

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +        +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLTGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSSATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+  A+  +++  + +G  LG  FQL DDLL
Sbjct: 155 DPDITEDDYMQVIYSKTARLFEAASHASAILCGATPEQEKAFQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|301166926|emb|CBW26505.1| putative octaprenyl-diphosphate synthase [Bacteriovorax marinus SJ]
          Length = 325

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 36/197 (18%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L+GGK++R  L      L+ V+  T      +IE +H  SL HDD+  +DN   RRG  +
Sbjct: 42  LVGGKRLRPLLTYLVGHLYGVDFKTLDPYAKSIELVHAASLSHDDV--IDNATTRRGVAS 99

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++IQ     A++AG+ LL                   S ++++LT N G   ++G     
Sbjct: 100 INIQASNKKAVLAGDYLL-------------------SDVIVNLT-NAGNLELVGEMAKV 139

Query: 167 IQD----EFID----ETQVF---MIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212
           IQD    E+I     ET+ +   +I+++   KT ++M + C + AI+A  S++  E+ + 
Sbjct: 140 IQDLAIGEWIQADAIETRDYTSELIEEIAIKKTASVMSWCCYAPAILAGLSRSTIEKSKQ 199

Query: 213 FGENLGIIFQLADDLLD 229
            G +LGI FQL DD LD
Sbjct: 200 MGIDLGIAFQLMDDTLD 216


>gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group]
          Length = 333

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 43  IRYALLG-GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +RYALL  G ++   L +              L   AA E +H  SL+HDD P MD+   
Sbjct: 1   MRYALLAAGNRVGPALSLAAFPRCSGARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDDDF 60

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLS---LTHN 153
           RRGKPT H+ Y E  A++ G+ LL+ +F  +    S P     D   ++++ +   L   
Sbjct: 61  RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARC 120

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEK 207
           IG +G++ GQ++D+  E    T+   ++++      KT AL+  +   GAI+   S  + 
Sbjct: 121 IGSEGLVAGQVVDL--EMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQI 178

Query: 208 ERLRCFGENLGIIFQLAD-DLLDCEEDLP 235
           E LR +  ++G++FQ+ D ++    E +P
Sbjct: 179 ESLRMYARSIGLLFQVVDLEMTGSTETVP 207



 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 8/74 (10%)

Query: 163 QMLDIQDEFIDETQVFMIQKM------KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           Q++D+  E    T+   ++++      KT AL+  +   GAI+   S  + E LR +  +
Sbjct: 193 QVVDL--EMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARS 250

Query: 217 LGIIFQLADDLLDC 230
           +G++FQ+ DD+LD 
Sbjct: 251 IGLLFQVVDDILDV 264


>gi|148826474|ref|YP_001291227.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittEE]
 gi|148716634|gb|ABQ98844.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittEE]
          Length = 323

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGANSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILGIMADATNVLAEGEVQ-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|298372664|ref|ZP_06982654.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275568|gb|EFI17119.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 323

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 11/195 (5%)

Query: 37  DRLL-SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           D LL +A++Y +   GK+IR  LV   A L          + AA E +H  SLIHDD+  
Sbjct: 30  DELLHNALQYLMPQKGKQIRPILVILGAKLCGEVTDDTYLIAAAYELLHSASLIHDDV-- 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +DN   RR KP+++  +D  T+++ G+ L+T +F  I       +  +  +L + +    
Sbjct: 88  IDNSLQRRNKPSLNKIFDNKTSVLVGDYLMTKSFNYIYHTYKMEQIGLLQKLSIDIIRGE 147

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            LQ      +         E + + + K KT AL     ++GA+ A+ +  + + +   G
Sbjct: 148 LLQQQYSHSI-------PKEKEYYSVIKNKTAALFATCLQAGALSANGTTQQLDDMYSIG 200

Query: 215 ENLGIIFQLADDLLD 229
           ENLG+ FQ+ DD+ D
Sbjct: 201 ENLGMCFQIKDDIFD 215


>gi|332967870|gb|EGK06966.1| octaprenyl-diphosphate synthase [Kingella kingae ATCC 23330]
          Length = 324

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     ++   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+A A+  +++ L+ FG ++G  FQ+ DD+L
Sbjct: 157 NVDITEAQYLQVIQYKTAKLFEAAAQVGAILAGATAEQEQALKDFGMHMGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|323701812|ref|ZP_08113482.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533116|gb|EGB22985.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 320

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 17/221 (7%)

Query: 19  ILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
           I +DL ++++      Q  D LL+     LL  GGK++R         L++ +    + +
Sbjct: 8   IREDLGMVESEIRKVVQSRDSLLTKTSLQLLNAGGKRLRPAFALLAGRLYDADVEKLIPL 67

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E IH  +L+HDD+  +D+   RRG PTV   +    ++  G+ L   +  +IS+ K
Sbjct: 68  AVALELIHMATLVHDDV--VDDSMTRRGTPTVKANWGNKISMHTGDYLFAKSLVLISTYK 125

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFA 192
             L   + ++  +          M  G++  I   +         F   + KT  L+  +
Sbjct: 126 EPLIAELLAKTSVK---------MCEGEIHQISTAYSANQSWRDYFYRIERKTALLIAAS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           C+ GA+ A A   + +RL  FG  LG+ FQ+ DD+LD   D
Sbjct: 177 CQLGAVAAGAPAKDHKRLGKFGHQLGMAFQITDDILDMVAD 217


>gi|319407551|emb|CBI81201.1| octaprenyl-diphosphate synthase [Bartonella sp. 1-1C]
          Length = 337

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 56  GGKRIRPMITLATAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTAR 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +I+ G+ LL  AF+++         ++ S   LS+  N     +  G+++ + 
Sbjct: 114 IIWGNQASILVGDFLLGQAFKMMV--------DVGSLDALSVLSNAAAI-IAEGEIMQLS 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                ET V     I   KT AL   A E G I+A     E+  L  +G +LG+ FQL D
Sbjct: 165 AAKNIETNVSDYLKIINAKTAALFSAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLID 224

Query: 226 DLLD 229
           D+LD
Sbjct: 225 DVLD 228


>gi|119493298|ref|XP_001263839.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya
           fischeri NRRL 181]
 gi|119411999|gb|EAW21942.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya
           fischeri NRRL 181]
          Length = 451

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++Q+    A++AG+ LL  A   ++ 
Sbjct: 193 RLAEITELIHTASLLHDDV--IDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALA- 249

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187
              +L+D   ++L+ ++  N+ ++G        + DE    F DET  + +QK  +KT +
Sbjct: 250 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTVADEKNPVFTDETISYYLQKTYLKTAS 305

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++  ++    E    +G NLG+ FQL DDLLD
Sbjct: 306 LISKSCRAAALLGGSTPEVVEAAYSYGRNLGLAFQLVDDLLD 347


>gi|332526525|ref|ZP_08402637.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2]
 gi|332110793|gb|EGJ10970.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2]
          Length = 313

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 8/183 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   +            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 34  GGKRMRPRLLLLFSEALGFRGPERYELAAVVELIHTSTLLHDDV--VDESSLRRGRATAN 91

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L + +F+++ S K+     +R   +L+   N+  +G +  Q++++ 
Sbjct: 92  SMFGNAAAVLVGDFLYSRSFQMMVSVKS-----MRVLEVLAEATNVIAEGEVL-QLMNMH 145

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + + KT  L   +   GA++A AS   +E    +G +LG  FQL DDLL
Sbjct: 146 DADLAVDEYLRVIRFKTAKLFEASARLGAVLAGASAEVEEACADYGRSLGTAFQLVDDLL 205

Query: 229 DCE 231
           D E
Sbjct: 206 DYE 208


>gi|94986958|ref|YP_594891.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731207|emb|CAJ54569.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 324

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 17/191 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L    + LF  N      +  ++E +H  +L+HDD+  +DN  +RR   T H 
Sbjct: 42  GKRLRPMLTILLSRLFGYNEDDIYPLAISVEFLHAATLLHDDV--LDNALLRRNTITAHN 99

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +  V+ I+AG+ LL     ++++   Q      SQ +    H         G++L+I  
Sbjct: 100 LFGTVSTILAGDALLAKGNLLVATYGCQKCILTISQALYQTAH---------GEILEIYN 150

Query: 168 QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           Q E  +   +++ I   KT  ++  AC+ GA+ A A+  + +    FG NLGI FQ+ DD
Sbjct: 151 QGEIWENKNIYLEIITGKTAWVIQAACKVGALKAGATPQQVDVAALFGYNLGIAFQIIDD 210

Query: 227 LLDCEEDLPKK 237
            LD    LP K
Sbjct: 211 ALDF---LPSK 218


>gi|71000625|ref|XP_754994.1| hexaprenyl pyrophosphate synthetase Coq1 [Aspergillus fumigatus
           Af293]
 gi|66852631|gb|EAL92956.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           fumigatus Af293]
 gi|159128008|gb|EDP53123.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           fumigatus A1163]
          Length = 450

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++Q+    A++AG+ LL  A   ++ 
Sbjct: 192 RLAEITELIHTASLLHDDV--IDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALA- 248

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187
              +L+D   ++L+ ++  N+ ++G        + DE    F DET  + +QK  +KT +
Sbjct: 249 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTVADEKNPVFTDETISYYLQKTYLKTAS 304

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++  ++    E    +G NLG+ FQL DDLLD
Sbjct: 305 LISKSCRAAALLGGSAPEVVEAAYSYGRNLGLAFQLVDDLLD 346


>gi|89256379|ref|YP_513741.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314825|ref|YP_763548.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|254367716|ref|ZP_04983737.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica 257]
 gi|89144210|emb|CAJ79480.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129724|gb|ABI82911.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253527|gb|EBA52621.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica 257]
          Length = 325

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVILFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q+  +   R++ +G  LG  FQ+A
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|56477995|ref|YP_159584.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
 gi|56314038|emb|CAI08683.1| Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915
           [Aromatoleum aromaticum EbN1]
          Length = 322

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A        +  ++ A +E IH  +L+HDD+  +D   +RRG  T +
Sbjct: 43  GGKRLRPALVLFSAGAMGYRGQSHHQLAAVVEFIHTATLLHDDV--VDESELRRGNKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++         ++R   +L+   NI  +G +  Q+L+  
Sbjct: 101 ALFGNAASVLVGDFLYTRAFQMMVGVG-----DMRVMQVLADATNIIAEGEVL-QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +D      + + KT  L   A   GAI+  A++ ++ ++  FG +LG  FQ+ DD+L
Sbjct: 155 NADVDIEDYLRVIRYKTAKLFEAATRLGAILGGANEEQERKVAAFGMHLGTAFQIIDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|302348132|ref|YP_003815770.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans
           345-15]
 gi|302328544|gb|ADL18739.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans
           345-15]
          Length = 338

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 10/194 (5%)

Query: 49  GGKKIRSFLVTECA-SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  +V   A +L  V+    A+ + +A+E  H ++L+HDD+  MDN   RRG PT
Sbjct: 43  GGKRLRPLVVLATARALGGVDAEARAIPLASAVEIFHNFTLVHDDI--MDNDDFRRGVPT 100

Query: 107 VHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           VH  Y    AI AG+ + + +F  I+ S +  L +    + + +LT     + +  GQ  
Sbjct: 101 VHKVYGVPLAITAGDLMFSLSFASILRSLEKGLDEEYVIKAVQALTE--ASRKVAEGQGY 158

Query: 166 DI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+   +   +D      +  +KTGAL+  + + GAI A A     E +  +G  +G+ FQ
Sbjct: 159 DMLFERSWNVDAEDYLRMIYLKTGALVEASAKLGAIAAKAKDEVIETMGEYGRLVGLAFQ 218

Query: 223 LADDLLDCEEDLPK 236
           + DD+L    D  K
Sbjct: 219 IRDDILGVFGDPSK 232


>gi|152972111|ref|YP_001337257.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896694|ref|YP_002921439.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042746|ref|ZP_06015900.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|150956960|gb|ABR78990.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238549021|dbj|BAH65372.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259039971|gb|EEW41088.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 323

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF+++    TQL  +++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMM----TQLG-SLKILEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   ++A  +  E+  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQCAGLLADCTAEEERALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|11499867|ref|NP_071111.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Archaeoglobus fulgidus DSM 4304]
 gi|2648237|gb|AAB88971.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           {Methanobacterium thermoautotrophicum [Archaeoglobus
           fulgidus DSM 4304]
          Length = 326

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 9/191 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          ++   +    +IE IH ++L+HDD+  MD   +RRG PTVH
Sbjct: 49  GGKRLRPVISLLAVEALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVH 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y E TAI+AG+ L   AF++++    + +   ++  MLS   ++ ++ +  GQ  D+ 
Sbjct: 107 RVYGEATAILAGDTLFAEAFKLLTKCDVESEGIRKATEMLS---DVCIK-ICEGQYYDMS 162

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E + E +   + ++KTG L+  +    A++   S+   + L  +G   GI FQ+ D
Sbjct: 163 FEKKESVSEEEYLRMVELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQD 222

Query: 226 DLLDCEEDLPK 236
           DLLD  E+  K
Sbjct: 223 DLLDLTEETGK 233


>gi|281422323|ref|ZP_06253322.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205]
 gi|281403644|gb|EFB34324.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205]
          Length = 325

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 10/197 (5%)

Query: 35  HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H+D LLS +        GK++R  L+   A  F             +E +H  SL+HDD+
Sbjct: 28  HSDGLLSQVLDHIRQRAGKRMRPILILLMARNFGKVSNVTQHSAVGLELLHTASLVHDDV 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG+ +V+  Y+   A++ G+ +L+ A   +S   ++      ++L   L++
Sbjct: 88  --VDESVERRGQASVNATYNNKVAVLVGDFILSTALLHVSYSHSEEIVRYLAELGRILSN 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              LQ      +  I +E I E   + + K KT AL       GA+ A+AS+ + E  + 
Sbjct: 146 GEILQ------LNSISNEEISEDIYYQVIKQKTAALFEACAGIGAMSANASELQIEEAKR 199

Query: 213 FGENLGIIFQLADDLLD 229
           FG+NLGIIFQ+ DD+ D
Sbjct: 200 FGQNLGIIFQIRDDIFD 216


>gi|329997657|ref|ZP_08302894.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3]
 gi|328538933|gb|EGF64988.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3]
          Length = 323

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF+++    TQL  +++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMM----TQLG-SLKILEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   ++A  +  E+  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQCAGLLADCTAEEERALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|239982232|ref|ZP_04704756.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 347

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 13/185 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  LV             ALR  AA+E  H ++L+HDD+  +D    RR +PT  
Sbjct: 62  GGKAVRPALVLAAVHALGGRPERALRSAAAVELTHNFTLLHDDV--IDRDRTRRHRPTAW 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + +  AI+AG+ L + A + ++           ++L   +        +  GQ  D  
Sbjct: 120 TVFGDADAILAGDALQSLAQQWLAEDPHPRAGAAVARLARCVIE------LCAGQHTDCA 173

Query: 169 DEFIDETQV-----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            E    T+V       + + KTGAL+  AC  GA+ A A  ++   L  FG   G+ FQL
Sbjct: 174 LEDRAPTEVSLDECLTMAESKTGALLGCACALGALHADAEPDQVNALDAFGREAGLAFQL 233

Query: 224 ADDLL 228
            DD++
Sbjct: 234 IDDII 238


>gi|18312349|ref|NP_559016.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18159799|gb|AAL63198.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 334

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 28/205 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +     AL   A +E IH YSLI+DD+  +D G +RRG PTV 
Sbjct: 42  GGKRLRPLLTLATAEAISGQWKPALPAAAIVELIHNYSLIYDDI--IDRGDLRRGMPTVR 99

Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             Y +  AI+ G        E ++ +PK  L     ++++ ++           G+ LDI
Sbjct: 100 KAYGDNAAILIGIWYREAIEEAVLDTPKPTLFAREVAKVIKAIDE---------GERLDI 150

Query: 168 QDEFIDETQVFMIQ---------------KMKTGALMCFACESGAIMAHASQNEKERLRC 212
             E+      + ++                +KTG L+  A + GA+         +    
Sbjct: 151 LFEYAGREDPYFVKARWREVTLDDYIKMVSLKTGVLIGAAAKWGALSVSDDAEIADAAWN 210

Query: 213 FGENLGIIFQLADDLLDCEEDLPKK 237
           FG N G+ FQ+ DD+LD   D PKK
Sbjct: 211 FGLNAGVAFQVIDDVLDIYGD-PKK 234


>gi|260581709|ref|ZP_05849506.1| heptaprenyl diphosphate synthase component II [Haemophilus
           influenzae NT127]
 gi|260095302|gb|EEW79193.1| heptaprenyl diphosphate synthase component II [Haemophilus
           influenzae NT127]
          Length = 329

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL ++++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QL-ESLKILSIMADATNVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|254372879|ref|ZP_04988368.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570606|gb|EDN36260.1| octaprenyl-diphosphate synthase [Francisella novicida GA99-3549]
          Length = 325

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q   +   R++ +G  LG  FQ+A
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGVISLDKQGYTKYQGRIKNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|323358802|ref|YP_004225198.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
 gi|323275173|dbj|BAJ75318.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
          Length = 353

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        + V  A+E  H  SL HDD+  MD    RRG P+  
Sbjct: 68  GGKRVRPMLAILTAQLGRGTTPEVIEVATALELTHLGSLYHDDV--MDGADKRRGVPSAQ 125

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +    AI+ G+ L + A ++++       QL+ +   +L+L   H       +G Q  
Sbjct: 126 TVWGNNIAILTGDLLFSRASQLMARRGERAIQLQADTFERLVLGQMHET-----VGPQEG 180

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D   EF        +   KTG+L+  A + G I + A +  ++ +  FGE  G+ FQL D
Sbjct: 181 DEPVEFY-----LRVLADKTGSLIAAAAQCGVIYSGAPEEFEQPMVVFGEKAGVAFQLLD 235

Query: 226 DLLDCEED 233
           D++D   D
Sbjct: 236 DVIDLSPD 243


>gi|325299489|ref|YP_004259406.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM
           18170]
 gi|324319042|gb|ADY36933.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM
           18170]
          Length = 324

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 10/185 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+ V +   L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPMLVMLMAKLYGVVNPATLHSALSLELLHTASLVHDDV--VDKSDKRRGQASVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            YD   +++ G+ +L  +    +  K  +L D     L+  L  N+    ++  Q+ +  
Sbjct: 103 LYDNRVSVLVGDYMLATSLRHAAYTKEIELVD-----LVARLGQNLSEGEIV--QLANTN 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E   F + + KT AL   + ESGA+   AS  + +    FGE +GI FQ+ DD+ 
Sbjct: 156 NTDFSEEIYFDVIRKKTAALFTASAESGALSVKASAEDVDNAALFGEMIGIAFQIKDDIF 215

Query: 229 DCEED 233
           D  E+
Sbjct: 216 DYFEN 220


>gi|4633648|gb|AAD26851.1| geranylgeranyl diphosphate synthase [Archaeoglobus fulgidus]
          Length = 317

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 9/191 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          ++   +    +IE IH ++L+HDD+  MD   +RRG PTVH
Sbjct: 40  GGKRLRPVISLLAVEALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y E TAI+AG+ L   AF++++    + +   ++  MLS   ++ ++ +  GQ  D+ 
Sbjct: 98  RVYGEATAILAGDTLFAEAFKLLTKCDVESEGIRKATEMLS---DVCIK-ICEGQYYDMS 153

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E + E +   + ++KTG L+  +    A++   S+   + L  +G   GI FQ+ D
Sbjct: 154 FEKKESVSEEEYLRMVELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQD 213

Query: 226 DLLDCEEDLPK 236
           DLLD  E+  K
Sbjct: 214 DLLDLTEETGK 224


>gi|205373837|ref|ZP_03226639.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
           coahuilensis m4-4]
          Length = 320

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V         N      V  ++E IH  SL+ DD+  +D+  IRRG PTV 
Sbjct: 43  GGKRIRPVFVLLGGKFGEYNIDVVKNVAVSLELIHMASLVLDDV--IDDAEIRRGIPTVK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+D   A+  G+ +   + + + +        I S  ++ +           G++  I+
Sbjct: 101 SQWDNKVAMYTGDYIFARSLDYMLNIPNPEAHKILSDAIVEVCK---------GEIAQIK 151

Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+++ E  +  ++ + K KT  L+  +C+ GAI++ A +   ERL  FG  +G+ FQ+ D
Sbjct: 152 DKYLFEQSLRDYLRRIKRKTALLIAVSCQLGAIVSGAPREVHERLYRFGYYVGMSFQIID 211

Query: 226 DLLD 229
           D+LD
Sbjct: 212 DILD 215


>gi|27262424|gb|AAN87493.1| Farnesyl pyrophosphate synthetase [Heliobacillus mobilis]
 gi|111075007|gb|ABH04860.1| polyprenyl diphosphate synthase [Heliobacillus mobilis]
 gi|155241755|gb|ABT18037.1| heptaprenyl diphosphate synthase [Heliobacillus mobilis]
          Length = 320

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V       N +    L +  A+E IH  SL+HDD+  +D    RRG PTV 
Sbjct: 42  GGKRLRPAFVLLAGRFHNYSLERLLPLAVAMEMIHMASLVHDDV--VDESKTRRGIPTVK 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI---GLQGMLGGQML 165
            ++    +I  G+ L   +  +I+    +L D+  S+++  ++  +    +Q M G    
Sbjct: 100 ARWGNRISIHTGDHLFARSLLLIA----ELNDDKISEVLAKVSVEMCKGEIQQMSG--TF 153

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+   F D   +F I++ KT  L+  +C+ GA+   A  +    L+ +G +LG+ FQ+ D
Sbjct: 154 DVNQTFRD--YLFHIKR-KTALLISASCQLGAMAVKADPSIVRALKMYGHHLGMAFQVTD 210

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 211 DILDLTAD 218


>gi|329938270|ref|ZP_08287721.1| putative polyprenyl diphosphate synthase [Streptomyces
           griseoaurantiacus M045]
 gi|329302759|gb|EGG46649.1| putative polyprenyl diphosphate synthase [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +  +A+    A+E +H ++L+HDD+  +D   +RR +P   
Sbjct: 62  GGKSVRPALTLLSAMAVGGSAESAVPGAVAVELVHDFTLLHDDV--IDGDDLRRHRPAAW 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ LL  A  +++  + Q       +L+ +L        ++ GQ  D+ 
Sbjct: 120 SVFGTPAAVLTGDALLVAAMRVLTDTQQQRMAVAVKELVDALLE------LVEGQSRDVA 173

Query: 169 DEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   E    Q   + + KTG+LM  A   G ++A A +     LR FG  LG+ FQ AD
Sbjct: 174 YEKAPEVSVAQYLAMAEGKTGSLMGCAAALGGVLAGADEVRVRGLREFGRRLGVAFQCAD 233

Query: 226 DLL 228
           D+L
Sbjct: 234 DVL 236


>gi|94270612|ref|ZP_01291782.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
 gi|93450734|gb|EAT01802.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
          Length = 340

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 38/244 (15%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L  +LQ  + +I+T++       A+ ++   + RL   + +AL  GGK+IR  L    A 
Sbjct: 6   LKKQLQAAAGQIETVM-------AADLEGVTSPRLREVLEHALFAGGKRIRPLLTLLAAR 58

Query: 64  LFNV-NH-------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           L    NH                 R+  A E +H  SL+HDD+  +D+   RRG+ TV+ 
Sbjct: 59  LTTAANHGGVPTEPPAADQATDQQRLAIAFEYLHTASLLHDDV--IDHAAQRRGRETVNS 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
           ++D+  AI+AG+ L   A          L  N   Q  L L  +   + M+  + L  + 
Sbjct: 117 RWDQGHAILAGDFLHARAM--------WLAGNYGGQPCLELIAS-ATEAMVAAEFLQAEA 167

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               ++  ET  F + + KT AL+  AC+ G +       + + LR +G NLG+ FQ+ D
Sbjct: 168 AAARDWRRET-YFAVLEGKTAALIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIID 226

Query: 226 DLLD 229
           DLLD
Sbjct: 227 DLLD 230


>gi|118399458|ref|XP_001032054.1| Polyprenyl synthetase family protein [Tetrahymena thermophila]
 gi|89286391|gb|EAR84391.1| Polyprenyl synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 438

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 6/159 (3%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE IH  SL+HDD+  +DN + RRG  T H+++    A+ +G+ ++  + + IS   
Sbjct: 175 AAVIENIHVSSLVHDDI--IDNAFTRRGLETAHVKFGHREAVFSGDYIIGRSGQQISRFN 232

Query: 136 TQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                 I S +M +LTH  I           D+ DE I+  Q  +    KT +LM F+ +
Sbjct: 233 DIRMYQIYSHIMENLTHGEINQANSKRTYKYDL-DEIIN--QYILKTYYKTASLMAFSAQ 289

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              I+ +   + +E L  F ++LGI FQLADD+LD   D
Sbjct: 290 GVGIILNQDFHNQECLFKFAQHLGISFQLADDMLDYTSD 328


>gi|76802484|ref|YP_327492.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
           dimethylallyltransferase / geranyltranstransferase /
           farnesytranstransferase ) [Natronomonas pharaonis DSM
           2160]
 gi|76558349|emb|CAI49939.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase
           (probable dimethylallyltransferase / probable
           geranyltranstransferase / probable
           farnesytranstransferase) [Natronomonas pharaonis DSM
           2160]
          Length = 341

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 28/223 (12%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNVNHLTA------------- 72
           +  +  Q  +RL SA RY L  GGK++R + L+    SL +V  L+A             
Sbjct: 23  SEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADVEPLSADYRQFPSLPGDEV 82

Query: 73  --LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L    +IE I  ++LIH     MD+  +RRG P VH +YD  TAI+AG+ L + AFE 
Sbjct: 83  DVLSAAVSIEVIQSFTLIH--DDIMDDDDLRRGVPAVHREYDLETAILAGDTLYSKAFEY 140

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTG 186
           +       + ++ +   L+ T       +  GQ LD+    + +   E  + M++  KT 
Sbjct: 141 MLDTGAPAERSVEALDELATT----CTEICEGQALDVDFENRSDVTTEEYLEMVE-FKTA 195

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            L   A    AI+  +     E L  +G ++G  FQ+ DDLLD
Sbjct: 196 VLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLD 238


>gi|312880186|ref|ZP_07739986.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260]
 gi|310783477|gb|EFQ23875.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260]
          Length = 303

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 12/231 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHN-------DRLLSAIRYAL-LGGKKIRSFLVTECA 62
           E  +R+   L++  L     + +Q          RL  A+ Y+L  GGK+IR  L    A
Sbjct: 4   ERQQRLKNFLEERRLWIEDALSSQCEVPWEEVPPRLQEAMVYSLQAGGKRIRPVLCLAAA 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
               +    A+ +  A E IH  SLIHDDLP MD+  +RRGKPT H  + E  A++AG+ 
Sbjct: 64  EQCGLAPRRAMPLALAHEWIHTASLIHDDLPCMDDDDLRRGKPTNHRVFGEALALLAGDA 123

Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF 178
           LL +AFE       + +L      + + +    +G +G+ GGQ+ D   Q +  D   V+
Sbjct: 124 LLAWAFEFALEGLCREELPAPQILKALQTFARAVGPRGICGGQVRDTDPQSQSEDPEDVW 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +I + KT  L+  A   GA++A A  +       +G +LG  FQ+ DD+LD
Sbjct: 184 LIARTKTSVLLESALVGGALLAGAEPSVVSAYGHYGTHLGTAFQIVDDVLD 234


>gi|319899203|ref|YP_004159296.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73]
 gi|319403167|emb|CBI76726.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73]
          Length = 338

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRIRPMITLAAAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++         ++ S   LS+  N     +  G+++ + 
Sbjct: 115 MIWGNQASVLVGDFLLGQAFKMMV--------DVGSLEALSVLANAAAI-IAEGEVMQLS 165

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                ET V     I   KT AL   A E G I+A     E+  L  +G +LG+ FQL D
Sbjct: 166 AAKNIETNVSNYLKIINAKTAALFSAAAEVGPIIAGYGHEERSALHQYGLSLGVAFQLID 225

Query: 226 DLLD 229
           D+LD
Sbjct: 226 DVLD 229


>gi|229592556|ref|YP_002874675.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25]
 gi|229364422|emb|CAY52224.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25]
          Length = 322

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +  A+  + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCGATVEQAEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|88811177|ref|ZP_01126433.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231]
 gi|88791716|gb|EAR22827.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231]
          Length = 328

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 14/216 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           LD  L +    + +    + +  ++Y +  GK+IR  LV             AL    AI
Sbjct: 14  LDKELTRQIPKLFSAFGPQQIKTVQYIINNGKRIRGCLVCLVNHALGGQIADALPRAVAI 73

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           ECI   SLIHDD   +DN  IRR +P          A++ G+  + +A  I S  +    
Sbjct: 74  ECIQAASLIHDDY--VDNDTIRRKRPATWTVEGPRRAVLLGD--MMFATAIQSMVELSNA 129

Query: 140 DNIRSQLMLSLTHNIGLQGML------GGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           D I     ++   N   Q  L       G+ LD+ ++ I E  +++    KTGAL   AC
Sbjct: 130 DGIAVTRAIATVANGAYQEPLLLAKPAAGRALDLNEQTIYERIIYL----KTGALFGAAC 185

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + GAI A A +        FG   G  +Q+ADDL++
Sbjct: 186 QLGAIAAGAPEERCAHAYAFGARTGEAYQIADDLVE 221


>gi|94264378|ref|ZP_01288169.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
 gi|93455207|gb|EAT05423.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
          Length = 340

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 38/244 (15%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L  +LQ  + +I+T++       A+ ++   + RL   + +AL  GGK+IR  L    A 
Sbjct: 6   LKKQLQAAAGQIETVM-------AADLEGVTSPRLREVLEHALFAGGKRIRPLLTLLAAR 58

Query: 64  LFNV-NH-------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           L    NH                 R+  A E +H  SL+HDD+  +D+   RRG+ TV+ 
Sbjct: 59  LTTAANHGGVPTEPPAADQATDRQRLAIAFEYLHTASLLHDDV--IDHAAQRRGRETVNS 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
           ++D+  AI+AG+ L   A          L  N   Q  L L  +   + M+  + L  + 
Sbjct: 117 RWDQGHAILAGDFLHARAM--------WLAGNYGGQPCLELIAS-ATEAMVAAEFLQAEA 167

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               ++  ET  F + + KT AL+  AC+ G +       + + LR +G NLG+ FQ+ D
Sbjct: 168 AAARDWRRET-YFAVLEGKTAALIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIID 226

Query: 226 DLLD 229
           DLLD
Sbjct: 227 DLLD 230


>gi|157803653|ref|YP_001492202.1| octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel]
 gi|157784916|gb|ABV73417.1| Octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel]
          Length = 327

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 99/178 (55%), Gaps = 13/178 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A +F+      +++ +A+E IH  +L+HDD+  +D+  +RR KPT +
Sbjct: 44  GGKRIRPLLTIITAKMFDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +   T+I+ G+ L + +F+++ +  +     I++  +L+    I  +G +  Q++ + 
Sbjct: 102 VIWGSKTSILVGDFLFSQSFKLMVAAGS-----IKAMNILAKASAIISEGEVV-QLVKLN 155

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +     IDE Q   I K KT  L   +C+ GAI+A    +  + ++ FG+ LG IFQ+
Sbjct: 156 ERRIITIDEYQ--QIVKSKTAELFGASCKVGAIIAEQVDHVSKDMQDFGKLLGTIFQV 211


>gi|119872709|ref|YP_930716.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674117|gb|ABL88373.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 334

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 28/205 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +     AL     +E IH YSLI+DD+  +D G +RRG PTV 
Sbjct: 42  GGKRLRPLLTLAIAEAVSGQWEPALPAATIVELIHNYSLIYDDI--IDRGDVRRGMPTVR 99

Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             + +  AI+ G        E ++ +PK          L+ +      ++ +  G+ LDI
Sbjct: 100 KAFGDNAAILIGIWYREAIEEAVLDTPKP---------LVFAKEVAKVIKAIDEGERLDI 150

Query: 168 QDEFIDETQVFMIQ---------------KMKTGALMCFACESGAIMAHASQNEKERLRC 212
             E+      + I+                +KTG L+  A + G +    S+   E    
Sbjct: 151 LFEYAGRDDPYFIKARKRDVTVEDYIHMVSLKTGVLIAAAAKWGVLSVSDSKELAETAWN 210

Query: 213 FGENLGIIFQLADDLLDCEEDLPKK 237
           FG N GI FQ+ DD+LD   D PKK
Sbjct: 211 FGLNAGIAFQIIDDVLDIYGD-PKK 234


>gi|331008742|gb|EGH88798.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 322

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ L + +FE++     +L      +++   T  I    +L  Q+  I+
Sbjct: 101 ALWGNAPRVLVGDFLYSRSFEMM----VELGSMEVMRILSKATRIIAEGEVL--QLSKIR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|295835546|ref|ZP_06822479.1| polyprenyl synthetase [Streptomyces sp. SPB74]
 gi|197699439|gb|EDY46372.1| polyprenyl synthetase [Streptomyces sp. SPB74]
          Length = 385

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 90  GGKAVRPALALISAEVTGAGAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 147

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++     +L      +    LT     + ++ GQ  DI 
Sbjct: 148 KVHGPAQAILVGDALFALANEVL----LELGTAEAGRATRRLTR--ATRALIDGQAQDIS 201

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 202 YEHRDRVTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVD 261

Query: 226 DLL 228
           DLL
Sbjct: 262 DLL 264


>gi|260548979|ref|ZP_05823201.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624]
 gi|260408147|gb|EEX01618.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624]
          Length = 325

 Score = 78.2 bits (191), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 26/194 (13%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L      L N+ H  A R+ A IE +H  +L+HDD+  +D   +RRG+P
Sbjct: 46  GGKRMRPIMCLLAARACGLDNMQH--AQRLAAIIEMLHTATLVHDDV--VDESGLRRGRP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           T +  ++  TA++ G+ L+  AF+++   +  T LKD            + G   +  G+
Sbjct: 102 TANATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGE 150

Query: 164 MLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +L +Q +      +ET + +I   KT  L   A E  AI+A   +  +E LR F  + G 
Sbjct: 151 VLQLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGN 208

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD+LD   D
Sbjct: 209 AFQIIDDILDYTSD 222


>gi|294630816|ref|ZP_06709376.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14]
 gi|292834149|gb|EFF92498.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14]
          Length = 336

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVASAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++    A++ G+ L   A +I++    +    +R Q        +  + ++ GQ+L   
Sbjct: 111 TRWGNSVAVLTGDFLFARASQILADLGPE---AVRVQ-------ALAFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+
Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|213859721|ref|ZP_03385425.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 318

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%)

Query: 32  QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           Q   + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+H
Sbjct: 24  QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 83

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S
Sbjct: 84  DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMS 136

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ 
Sbjct: 137 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 195

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L+ +G  LG  FQL DDLLD   D
Sbjct: 196 LQDYGRYLGTAFQLIDDLLDYSAD 219


>gi|213582666|ref|ZP_03364492.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 319

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%)

Query: 32  QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           Q   + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+H
Sbjct: 24  QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 83

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S
Sbjct: 84  DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMS 136

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ 
Sbjct: 137 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 195

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L+ +G  LG  FQL DDLLD   D
Sbjct: 196 LQDYGRYLGTAFQLIDDLLDYSAD 219


>gi|332664666|ref|YP_004447454.1| trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333480|gb|AEE50581.1| Trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM
           1100]
          Length = 322

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 29/232 (12%)

Query: 16  IDTI---LDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRS---FLVTE-CASL 64
           +DTI   +D  L++   H +        LL  I Y ++   GK++R    FL  + C  +
Sbjct: 3   LDTIKKPIDQELIKFEQHFKQSMRSSVPLLDKITYYIVRRKGKQVRPMFVFLAAQVCGGV 62

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               ++ A    + IE +H  +L+HDD+  +D+   RRG  +V+  +    A++ G+ LL
Sbjct: 63  VEATYVAA----SLIELLHTATLVHDDV--VDDSMERRGFFSVNALWKNKIAVLVGDFLL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181
           +    +++    Q +       +L +  +  ++ M  G++L I+      I E   + I 
Sbjct: 117 SQGL-LLAVRNKQFR-------ILEIVSD-AVKAMSEGELLQIEKARRLDIKEEVYYEII 167

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KT +L+  AC++GA  A   ++  ER+R FGE +G+ FQ+ DDL D   D
Sbjct: 168 RQKTASLISSACQAGAASATTDEDAIERMRLFGEKIGLAFQIKDDLFDFGTD 219


>gi|94501366|ref|ZP_01307886.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65]
 gi|94426479|gb|EAT11467.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65]
          Length = 322

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A     N      + + IE +H  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRMRPLLVLLAAKALESNEQNHPLLASIIEFLHTATLLHDDV--VDTSDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AFE++     QL  ++    +LS    +  +G +  Q+++++
Sbjct: 101 AAFGNAPSVLVGDFLYSRAFEMM----VQLG-SMEVMAILSNATCVIAEGEVM-QLMNVK 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E +   + + KT  L   +  SGA +A+AS  + E LR FG +LG+ FQL DD+L
Sbjct: 155 NPNVGEDKYMDVIQGKTAMLFEASSHSGAKLANASPEQAEALRLFGHHLGMAFQLVDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|146313257|ref|YP_001178331.1| octaprenyl diphosphate synthase [Enterobacter sp. 638]
 gi|145320133|gb|ABP62280.1| Trans-hexaprenyltranstransferase [Enterobacter sp. 638]
          Length = 323

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAARAVGYQGDAHVNIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  ++ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTEAQERGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|312199711|ref|YP_004019772.1| polyprenyl synthetase [Frankia sp. EuI1c]
 gi|311231047|gb|ADP83902.1| Polyprenyl synthetase [Frankia sp. EuI1c]
          Length = 338

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 15/190 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR +PT  
Sbjct: 53  GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             +    AI+AG+ LL  A +++   + + +   ++ ++L      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGEPGRKAAVIL----GAGVQDLVRGQAEDLL 164

Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                D  + ET    ++  KTGAL+  A   GA++A A +   + L  FG  LG  FQL
Sbjct: 165 FESRSDVTVAET--LHMEDGKTGALLACAASLGAVLAGAPKEVVDGLAEFGSRLGTAFQL 222

Query: 224 ADDLLDCEED 233
            DDLL    D
Sbjct: 223 IDDLLGIWGD 232


>gi|329118546|ref|ZP_08247250.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465281|gb|EGF11562.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 324

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIITILAGKSLGYDGDPLYSLAAMVEFIHTSTLLHDDV--VDESDMRRGRETAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     ++   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MKILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I ET+   + + KT  L   A + GAI+A AS  ++  LR +G  +G  FQ+ DD+L
Sbjct: 157 NTDISETEYLRVIQYKTAKLFEAAAQVGAILAGASAEQEAALRDYGMYVGTAFQIVDDIL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|291454079|ref|ZP_06593469.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291357028|gb|EFE83930.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 383

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 13/185 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  LV             ALR  AA+E  H ++L+HDD+  +D    RR +PT  
Sbjct: 98  GGKAVRPALVLAAVHALGGRPERALRSAAAVELTHNFTLLHDDV--IDRDRTRRHRPTAW 155

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + +  AI+AG+ L + A + ++           ++L   +        +  GQ  D  
Sbjct: 156 TVFGDADAILAGDALQSLAQQWLAEDPHPRAGAAVARLARCVIE------LCAGQHTDCA 209

Query: 169 DEFIDETQV-----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            E    T+V       + + KTGAL+  AC  GA+ A A  ++   L  FG   G+ FQL
Sbjct: 210 LEDRAPTEVSLDECLTMAESKTGALLGCACALGALHADAEPDQVNALDAFGREAGLAFQL 269

Query: 224 ADDLL 228
            DD++
Sbjct: 270 IDDII 274


>gi|16762067|ref|NP_457684.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16766600|ref|NP_462215.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29143556|ref|NP_806898.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56415234|ref|YP_152309.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197364164|ref|YP_002143801.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205354206|ref|YP_002228007.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207858553|ref|YP_002245204.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213053033|ref|ZP_03345911.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426652|ref|ZP_03359402.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213646987|ref|ZP_03377040.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|238910099|ref|ZP_04653936.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825815|ref|ZP_06544983.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25314317|pir||AH0903 octaprenyl-diphosphate synthase [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16421862|gb|AAL22174.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16504370|emb|CAD07822.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139191|gb|AAO70758.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56129491|gb|AAV78997.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197095641|emb|CAR61209.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205273987|emb|CAR38993.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206710356|emb|CAR34714.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261248470|emb|CBG26307.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301159854|emb|CBW19373.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|322684901|gb|EFY80899.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323211311|gb|EFZ96155.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323224032|gb|EGA08325.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230319|gb|EGA14438.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323246927|gb|EGA30893.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254140|gb|EGA37960.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|332990163|gb|AEF09146.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 323

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%)

Query: 32  QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           Q   + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+H
Sbjct: 24  QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 83

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S
Sbjct: 84  DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMS 136

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ 
Sbjct: 137 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 195

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L+ +G  LG  FQL DDLLD   D
Sbjct: 196 LQDYGRYLGTAFQLIDDLLDYSAD 219


>gi|261884768|ref|ZP_06008807.1| geranyltranstransferase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 124

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 4/107 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIE 80
           +L L          ND L   ++    GGK  R+ L+         +  +A   V AA+E
Sbjct: 8   ELNLPKVDSFHPHFNDSLSWVLK---AGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVE 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +H YSLIHDDLP MDN  +RRG  T+H++YDEV+A++AG+ L T+A
Sbjct: 65  MLHTYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHA 111


>gi|269798314|ref|YP_003312214.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
 gi|269094943|gb|ACZ24934.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
          Length = 323

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ L    A+         +++  A+E +H  +LIHDD+  +D   IRRG+ T+H
Sbjct: 46  GGKRLRAQLCLLIANAGTSIERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +      AI++G+ L   AF+I+S         + S ++  L           G+ + ++
Sbjct: 104 MHKGNKVAILSGDYLFAKAFKIVSEMTNMKYLQVFSHIITCLVE---------GEFMQME 154

Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + ID+  + +MI+  K  A     C E G ++    ++E   L+ +G  LG+ FQ+ D
Sbjct: 155 DVYRIDQGIERYMIKTQKKTADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITD 214

Query: 226 DLLDCEE 232
           D++D  E
Sbjct: 215 DIMDYRE 221


>gi|213622139|ref|ZP_03374922.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 317

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 37  GGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 94

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 95  AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 148

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  +++ L+ +G  LG  FQL DDLL
Sbjct: 149 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLL 208

Query: 229 DCEED 233
           D   D
Sbjct: 209 DYSAD 213


>gi|150395683|ref|YP_001326150.1| polyprenyl synthetase [Sinorhizobium medicae WSM419]
 gi|150027198|gb|ABR59315.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419]
          Length = 338

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASMFGYEGDGHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A AS+ ++  L+ +G NLG+ FQL DD+L
Sbjct: 175 DDYL------QVIRAKTAALFAAASEVGPIVASASKADRNALKSYGTNLGLAFQLVDDVL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|326382545|ref|ZP_08204236.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198664|gb|EGD55847.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 360

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 38/215 (17%)

Query: 45  YALLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + L GGK++R   V     C      +   ALRVGAAIE I   +LIHDD+  +D    R
Sbjct: 43  FVLAGGKRVRPSFVYAGWRCGPDTAGDDTMALRVGAAIELIQACALIHDDI--LDRSDTR 100

Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIIS--SPKTQLKDNIR 143
           RG PTVH +++ +                 AI+ G+  L +A +++    P T    + R
Sbjct: 101 RGNPTVHRRFEGLHAGRRLTGDSAHYGVSAAILLGDLALAWADDLVHGIGPATDGWADPR 160

Query: 144 SQLMLSLTHNIGL------QGMLGGQMLDIQDEFI-DE--TQVFMIQKMKTGAL-MCFAC 193
                 L  ++G+        +LGGQ+LDI +E   DE  T  + + + KT A  +    
Sbjct: 161 -----PLPRSVGVLWSRMRTEVLGGQLLDITNESSRDESVTAAYRVMEYKTAAYTVARPL 215

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           + GA ++ A       L   G +LGI FQL DD+L
Sbjct: 216 QLGAALSGADAALSGSLHRIGLDLGIAFQLRDDVL 250


>gi|312869707|ref|ZP_07729854.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3]
 gi|311094756|gb|EFQ53053.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3]
          Length = 327

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 24/191 (12%)

Query: 49  GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R  L+   + +F     N    +++ A+IE +H  +LIHDD+  +D+   RRG  
Sbjct: 44  GGKYLRPALLLLTSQIFTPSSRNDERLIKLAASIEVLHMATLIHDDI--IDDSPERRGAV 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII-----SSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           ++  ++ + TA+ AG+ L T  F+++     +SP  Q+      Q+         L G L
Sbjct: 102 SIQARFGKDTAVYAGDLLFTVFFDLLLEAIPASPYLQVNARAMRQI---------LDGEL 152

Query: 161 G--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           G   Q  ++Q    D        + KT AL   A + GA  A A+  +      FG+ LG
Sbjct: 153 GQMDQRFNLQQTLDD---YLANVRGKTAALFKLAAQEGAYFAAATTEQVASAAAFGQQLG 209

Query: 219 IIFQLADDLLD 229
           I FQ+ DD+LD
Sbjct: 210 IAFQMLDDILD 220


>gi|292669963|ref|ZP_06603389.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia
           ATCC 43541]
 gi|292648375|gb|EFF66347.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia
           ATCC 43541]
          Length = 349

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 12/184 (6%)

Query: 49  GGKKIRS--FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R   FLV       + +   A+ + AA+E +H  SL+HDD+  +D    RRG  T
Sbjct: 66  GGKRLRPALFLVAARGGT-SFDPARAMPIAAALELVHTASLVHDDV--IDEADTRRGAAT 122

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQML 165
            + ++    AI+ G+ +   AF++I+         ++ +QL+ +L+    LQ     Q+ 
Sbjct: 123 ANAKWGNQIAILTGDYIFARAFKLIAEKGYDSSIYVKLAQLVCTLSEGEILQDHTVYQVP 182

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  DE+  +   + KT   +   CE GA++   S ++  R+  +G+ LG+ FQ+ D
Sbjct: 183 K------DESAYYERIRKKTADFLEICCELGAMIGGMSADDTARMAQYGQALGMAFQITD 236

Query: 226 DLLD 229
           DLLD
Sbjct: 237 DLLD 240


>gi|161616314|ref|YP_001590279.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194443184|ref|YP_002042563.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449256|ref|YP_002047334.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472845|ref|ZP_03078829.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736065|ref|YP_002116255.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195873559|ref|ZP_02697387.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197250149|ref|YP_002148230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264749|ref|ZP_03164823.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197301014|ref|ZP_02663064.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|198241919|ref|YP_002217276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200386848|ref|ZP_03213460.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204931208|ref|ZP_03222002.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205357197|ref|ZP_02345799.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205358083|ref|ZP_02575589.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205358511|ref|ZP_02656973.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205359199|ref|ZP_02668072.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205359738|ref|ZP_02831626.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205360595|ref|ZP_02684656.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|224585102|ref|YP_002638901.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|161365678|gb|ABX69446.1| hypothetical protein SPAB_04122 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401847|gb|ACF62069.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407560|gb|ACF67779.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194459209|gb|EDX48048.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711567|gb|ACF90788.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195633125|gb|EDX51539.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197213852|gb|ACH51249.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197243004|gb|EDY25624.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289078|gb|EDY28447.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197936435|gb|ACH73768.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603946|gb|EDZ02491.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204319975|gb|EDZ05181.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205323255|gb|EDZ11094.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205327615|gb|EDZ14379.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333924|gb|EDZ20688.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205337771|gb|EDZ24535.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205343490|gb|EDZ30254.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348475|gb|EDZ35106.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|224469630|gb|ACN47460.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|312914332|dbj|BAJ38306.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087750|emb|CBY97514.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225271|gb|EFX50330.1| Octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615309|gb|EFY12230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618332|gb|EFY15223.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622863|gb|EFY19707.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626815|gb|EFY23612.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631384|gb|EFY28144.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635349|gb|EFY32063.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643348|gb|EFY39912.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647080|gb|EFY43581.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648883|gb|EFY45328.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655075|gb|EFY51386.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657678|gb|EFY53946.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664174|gb|EFY60372.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667457|gb|EFY63619.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674705|gb|EFY70797.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675662|gb|EFY71735.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682298|gb|EFY78321.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|323131665|gb|ADX19095.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195894|gb|EFZ81065.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199011|gb|EFZ84108.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204289|gb|EFZ89298.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207636|gb|EFZ92583.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323214747|gb|EFZ99496.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221227|gb|EGA05653.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323233295|gb|EGA17389.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239332|gb|EGA23382.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242417|gb|EGA26443.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323255257|gb|EGA39034.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262720|gb|EGA46276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264030|gb|EGA47538.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269416|gb|EGA52871.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326625055|gb|EGE31400.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326629328|gb|EGE35671.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 370

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%)

Query: 32  QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           Q   + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+H
Sbjct: 71  QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 130

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRGK T +  +    +++ G+ + T AF++++S       +++   ++S
Sbjct: 131 DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTS-----LGSLKVLEVMS 183

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ 
Sbjct: 184 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 242

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L+ +G  LG  FQL DDLLD   D
Sbjct: 243 LQDYGRYLGTAFQLIDDLLDYSAD 266


>gi|257054406|ref|YP_003132238.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
 gi|256584278|gb|ACU95411.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
          Length = 337

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 18/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R  + T  A+ F         +   AA+E +H  +L HDD+  MD   +RRG P+
Sbjct: 59  GGKRFRP-MFTLLAAQFGTGGRRDDVITAAAAVELVHLATLYHDDV--MDEATMRRGAPS 115

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V+ ++D   AI+ G+ L  +A  +++   T     I       +T          GQM +
Sbjct: 116 VNARWDNSVAILTGDYLFAHASRLVADLGTDAARIIAETFGELVT----------GQMRE 165

Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                 D+  V     +   KTG+L+  A   G + + AS    E LR FG+ +G  FQ+
Sbjct: 166 TVGPGADDDHVEHYLSVIAQKTGSLIATAGRFGGMFSGASPEHVEALRRFGDIIGTAFQI 225

Query: 224 ADDLLD 229
           +DD++D
Sbjct: 226 SDDIID 231


>gi|156120113|gb|ABG57080.2| Hep2 [Heliophilum fasciatum]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 8/211 (3%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           + +++M T H     ++      GGK++R   V       N +    L +   +E IH  
Sbjct: 19  ELSNYMDTDHPTLTAASGHLLYAGGKRLRPAFVLLAGRFHNYSFERLLPLAVTMEMIHMA 78

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           +L+HDD+  +D    RRG PTV  ++    ++ AG+ L   +  +I+     +   + ++
Sbjct: 79  TLVHDDV--IDESETRRGTPTVRARWGNRVSMHAGDHLFARSLLLIAEMNNPIIARVLAE 136

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             + +     +Q M      D++  F D   ++ I++ KT  L+  +C+ GA+   A   
Sbjct: 137 TSVEMCEG-EIQQM--ATAFDVEQNFRD--YLYRIKR-KTALLLSASCQLGAVAVDAPPY 190

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               L+ +G +LG+ FQ+ DD+LD E D  K
Sbjct: 191 MIRALKWYGYHLGMAFQVTDDILDLEADEAK 221


>gi|289642098|ref|ZP_06474250.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508061|gb|EFD29008.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata]
          Length = 338

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR +PT  
Sbjct: 53  GGKLVRPALALLSAEAAGAAVEVGLPGAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + + +   R+ +ML      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGEPGRRAAIML----GAGVQDLVRGQAEDLY 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  ++  V     ++  KTGAL+  +   GA++A       + L  FG  LG  FQL D
Sbjct: 165 FETRNDVTVADTLTMEDGKTGALLSCSAAIGAVLAGGRTELVDGLAEFGSRLGTAFQLVD 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|219129739|ref|XP_002185039.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403534|gb|EEC43486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 325

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 31/201 (15%)

Query: 49  GGKKIRSFLVTECASLFNVNHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGKK+R  +V   +   N           R+    E IH  SL HDD+  +D    RRG 
Sbjct: 42  GGKKVRPMMVLLLSRALNWQRSDLPQAQRRLAEISEMIHTASLFHDDV--IDGAETRRGA 99

Query: 105 PTVHIQYDEVTAIIAGNGLLTYA---------FEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           P+VH+ +    AI+AG+ LL  A          E++ +  T ++  +R ++M        
Sbjct: 100 PSVHMVFGNKMAILAGDYLLARASICLARLRNVEVVETMSTIIEHLVRGEVM-------Q 152

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCF 213
           L+G           E   E  V+ ++K   KTG+LM  +C+S A++        +    F
Sbjct: 153 LRG-------STSSERSGERLVYYLRKNFYKTGSLMANSCKSAALLGEYPNELVDASYRF 205

Query: 214 GENLGIIFQLADDLLDCEEDL 234
           G+++G+ FQL DD+LD E  L
Sbjct: 206 GKHVGMAFQLVDDVLDFEGSL 226


>gi|257387323|ref|YP_003177096.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169630|gb|ACV47389.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 281

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 14/201 (6%)

Query: 37  DRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   +R+ AL GGK++R  +              A+     IE +H  SL+ DD+  +
Sbjct: 26  DELADEVRHVALAGGKRVRPTVTVLVCEALGGEPADAVEFAVGIELVHNASLVIDDI--I 83

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRG P+    +    AIIA +GLL  AF + SS +  ++    S + L       
Sbjct: 84  DESDVRRGTPSAWAAFGHGPAIIASDGLLGEAFALFSSDERAMQAVTESMVELG------ 137

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                 G+  ++  +  +ET+   + + KTGAL   A E GAI A A     E    + E
Sbjct: 138 -----EGEATELVSQPTNETEYIELARRKTGALFRAAAELGAIAADADAYTVEAFGQYAE 192

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
            +G+ FQ+ DD+LD   D  K
Sbjct: 193 RVGVAFQMRDDVLDATADAEK 213


>gi|121998628|ref|YP_001003415.1| trans-hexaprenyltranstransferase [Halorhodospira halophila SL1]
 gi|121590033|gb|ABM62613.1| Trans-hexaprenyltranstransferase [Halorhodospira halophila SL1]
          Length = 323

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A          +++ A IE IH  +L+HDD+  +D   +RRGK T H
Sbjct: 43  GGKRLRPMVVLLAARACGYQGKDHVQLAAIIEFIHTATLLHDDV--VDGSDMRRGKQTAH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AFE++     +L      +++   T+ I    ++  Q++++ 
Sbjct: 101 TIWGNEASVLVGDFLYTRAFEMM----VELDSMAVLRILARATNTIARGEVM--QLMNVH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E     +   KT  L    C++GA++A       E L  +G +LG  +QL DD L
Sbjct: 155 EPDLTEADYRQVIYRKTATLFEAGCQNGAVLAGLDDAGCEALAAYGRHLGTAYQLVDDAL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSGD 219


>gi|328676037|gb|AEB28712.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Francisella cf.
           novicida 3523]
          Length = 325

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVMLFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN---EKERLRCFGENLGIIFQLA 224
           ++  + E     +   KT  L   ACE   +++   Q+    ++ +R +G  LG  FQ+A
Sbjct: 155 RNSELSEEDYIKVIYCKTAKLFEAACELAGVISLDKQSYAKYQDNIRNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|229029293|ref|ZP_04185383.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1271]
 gi|228732041|gb|EEL82933.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1271]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|62181813|ref|YP_218230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62129446|gb|AAX67149.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|267995503|gb|ACY90388.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|322716302|gb|EFZ07873.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 381

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 10/198 (5%)

Query: 38  RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+  +
Sbjct: 88  QLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--V 145

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   N+ 
Sbjct: 146 DESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVI 200

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ +G 
Sbjct: 201 AEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGR 259

Query: 216 NLGIIFQLADDLLDCEED 233
            LG  FQL DDLLD   D
Sbjct: 260 YLGTAFQLIDDLLDYSAD 277


>gi|297203852|ref|ZP_06921249.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
 gi|197711907|gb|EDY55941.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
          Length = 378

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 87  GGKAVRPALAVLSAEVTGAAPETGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTTAT------RALIDGQAQDIS 198

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 199 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLAFQAVD 258

Query: 226 DLL 228
           DLL
Sbjct: 259 DLL 261


>gi|228907246|ref|ZP_04071106.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis IBL 200]
 gi|228852386|gb|EEM97180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis IBL 200]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|228978217|ref|ZP_04138594.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis Bt407]
 gi|228781234|gb|EEM29435.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis Bt407]
 gi|326939231|gb|AEA15127.1| farnesyltransferase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|228920324|ref|ZP_04083671.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|229043359|ref|ZP_04191076.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH676]
 gi|229109069|ref|ZP_04238669.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock1-15]
 gi|229126927|ref|ZP_04255938.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-Cer4]
 gi|229144212|ref|ZP_04272626.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST24]
 gi|229149811|ref|ZP_04278040.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           m1550]
 gi|228633675|gb|EEK90275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           m1550]
 gi|228639220|gb|EEK95636.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST24]
 gi|228656527|gb|EEL12354.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-Cer4]
 gi|228674347|gb|EEL29591.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock1-15]
 gi|228725940|gb|EEL77180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH676]
 gi|228839347|gb|EEM84641.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 305

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 28  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166
           + ++ +  A+  G+ L   + E I+        NI   +   +L+H I    +  G++  
Sbjct: 85  NAKWGDRIAMYTGDYLFAKSLECIT--------NIEIPEAHQALSHTI--LEVCKGEIEQ 134

Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+
Sbjct: 135 IKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQI 194

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE L K
Sbjct: 195 IDDILDFVSTEEKLGK 210


>gi|117927490|ref|YP_872041.1| trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B]
 gi|117647953|gb|ABK52055.1| Trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B]
          Length = 349

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 21/235 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + GL +++++  + ++T+L   +  +     T+ +  L+ A      GGK+ R  LV   
Sbjct: 29  DAGLRTRVRDGLEAVETLLRQAVRSSGYPFLTETSRHLVEA------GGKRFRPLLVLLA 82

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +   A +E  H  +L HDD+  MD   +RRG  + + ++    AI+ G+
Sbjct: 83  AEYGDPTAPGVVPAAAVVELTHLATLYHDDV--MDEAVVRRGTASANARWSNTIAILTGD 140

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
            L + A ++++    +    +R Q           + ++ GQ+ +    +E +D  + ++
Sbjct: 141 FLFSRASDLLADLGPE---AVRIQART-------FERLVQGQIRETLGPEEGVDPVEHYL 190

Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  A   GA+ + A     + +  +GE +G  FQL+DDLLD   D
Sbjct: 191 RVVADKTGSLIATAARFGAMFSGAPAWIVDVMVTYGERIGTAFQLSDDLLDVMSD 245


>gi|294671407|ref|ZP_06736256.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291306884|gb|EFE48127.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 353

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 15/219 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           R+D +++  + Q+   + +Q    ++SA      GGK++R  +          ++     
Sbjct: 47  RVDVVINRAV-QSEVALISQIGTYIISA------GGKRLRPVITILSGRALGCDNDGLYS 99

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L T AF+++   
Sbjct: 100 LAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLYTRAFQLMVGS 157

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            +     ++   +++   NI  +G +  Q+++I +  I E Q   + + KT  L   A +
Sbjct: 158 GS-----MKILEVMADATNIIAEGEVM-QLMNIGNIDITEAQYLQVIQYKTAKLFEAAAQ 211

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            GAI+A AS  ++  LR +G  +G  FQ+ DD+LD   D
Sbjct: 212 VGAILAGASAEQEAALRDYGMYVGTAFQIIDDVLDYSGD 250


>gi|229172251|ref|ZP_04299815.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3]
 gi|228611239|gb|EEK68497.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|88607961|ref|YP_506132.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600130|gb|ABD45598.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str.
           Miyayama]
          Length = 321

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 22/231 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +   E  + ++ +L D +         ++  ++LS+       GK+IR+ L     +L
Sbjct: 7   LNASFSEKLRSVEEVLHDSMTTFTKLKSIEYAKKMLSS-------GKRIRALLSLLSFAL 59

Query: 65  -FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +    +R  A IE IH  +L+HDD+  +D   IRRGKP +   +    +++ G+ L
Sbjct: 60  CKNADTNAEIRAAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNKISVLTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
           L+ AFEII   K     N+   L+LS T     + +  G+ML +Q   E + E++   + 
Sbjct: 118 LSVAFEIILECK-----NLSVVLLLSKTA----KQLSEGEMLQLQSIGEIVSESEYLEVI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT  L   A E  AI+    Q     LR  G  +G+ FQ+ DD+LD  E
Sbjct: 169 ARKTAVLFSAAAEIAAILT-GKQEYVVILREIGFLIGMAFQITDDVLDYGE 218


>gi|229069166|ref|ZP_04202457.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           F65185]
 gi|228713918|gb|EEL65802.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           F65185]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|209693963|ref|YP_002261891.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238]
 gi|208007914|emb|CAQ78045.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238]
          Length = 323

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T +F++++S  +     I+   ++S + N+  +G +  Q+++  
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSESVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+ +ASQ  +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNNASQEIETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|218896543|ref|YP_002444954.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           G9842]
 gi|228964588|ref|ZP_04125697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218541188|gb|ACK93582.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           G9842]
 gi|228795122|gb|EEM42619.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|218233341|ref|YP_002366295.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           B4264]
 gi|228957889|ref|ZP_04119629.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229178021|ref|ZP_04305393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           172560W]
 gi|229189695|ref|ZP_04316709.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
           10876]
 gi|296502183|ref|YP_003663883.1| farnesyltransferase [Bacillus thuringiensis BMB171]
 gi|218161298|gb|ACK61290.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           B4264]
 gi|228593744|gb|EEK51549.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
           10876]
 gi|228605509|gb|EEK62958.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           172560W]
 gi|228801805|gb|EEM48682.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|296323235|gb|ADH06163.1| farnesyltransferase [Bacillus thuringiensis BMB171]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|229078796|ref|ZP_04211349.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock4-2]
 gi|228704478|gb|EEL56911.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock4-2]
          Length = 305

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 28  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 85  NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 135

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 136 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 195

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 196 DDILDFVSTEEKLGK 210


>gi|42780715|ref|NP_977962.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC
           10987]
 gi|42736635|gb|AAS40570.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC
           10987]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYDYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|296447427|ref|ZP_06889352.1| Geranyltranstransferase [Methylosinus trichosporium OB3b]
 gi|296255047|gb|EFH02149.1| Geranyltranstransferase [Methylosinus trichosporium OB3b]
          Length = 338

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A +        ++  A IE +H  +L+HDD+  +D   +RRGK    
Sbjct: 57  GGKRLRPMLVLATAGMCGYRGDGHIKFAAGIEFMHTATLLHDDV--VDESDMRRGKIAAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +   T ++ G+ LL +AF+++  P      ++ SQ    +     LQ      +   +
Sbjct: 115 MLWGNETCVLVGDFLLGHAFKMMVEPGVLPCLSVVSQAAAVIAEGEILQ------LNSAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   A E G +++   + ++   R +G NLGI FQL DD L
Sbjct: 169 DTQTTEDAYMAVIRSKTAELFAAAAEVGPMLSGRPKADEAACRSYGMNLGIAFQLIDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|228900194|ref|ZP_04064426.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis IBL 4222]
 gi|228859464|gb|EEN03892.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis IBL 4222]
          Length = 320

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|52143833|ref|YP_082994.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           E33L]
 gi|51977302|gb|AAU18852.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           E33L]
          Length = 323

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 46  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 213

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 214 DDILDFVSTEEKLGK 228


>gi|30019662|ref|NP_831293.1| farnesyltransferase [Bacillus cereus ATCC 14579]
 gi|29895206|gb|AAP08494.1| Farnesyltransferase [Bacillus cereus ATCC 14579]
          Length = 323

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 46  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 213

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 214 DDILDFVSTEEKLGK 228


>gi|75762755|ref|ZP_00742585.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
           Farnesyltransferase / Heptaprenyl diphosphate synthase
           component II [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74489758|gb|EAO53144.1| Farnesyl pyrophosphate synthetase  / Geranyltranstransferase /
           Farnesyltransferase / Heptaprenyl diphosphate synthase
           component II [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 323

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 46  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 213

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 214 DDILDFVSTEEKLGK 228


>gi|302876186|ref|YP_003844819.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
 gi|307686918|ref|ZP_07629364.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
 gi|302579043|gb|ADL53055.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
          Length = 795

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 9/200 (4%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           D + +A  Y+L G GK++R  +        + +     L +  ++E +H  SLI DDLP+
Sbjct: 533 DFISNAANYSLRGDGKRLRPIMAWVMGVKEYGLKESEMLPLLRSLEYMHTASLIFDDLPA 592

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHN 153
            DN  IRRG+PTVH  Y+   A + G  L   A E     +T L+  ++R+ L L     
Sbjct: 593 QDNADIRRGRPTVHKVYNVAIAELTGLFLTQKAIE----EQTFLQQFDLRNVLKLIRYST 648

Query: 154 IGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
                +  GQ +D++ +    T  Q+ M+   KTG     A    AI+A   Q E E L+
Sbjct: 649 ETTADLCKGQTMDLEAKGKQLTLEQLNMMCFYKTGKGFEAALMMPAILAARDQVEMEALK 708

Query: 212 CFGENLGIIFQLADDLLDCE 231
            F  + GI FQ+ DDLLD E
Sbjct: 709 KFSYHAGIAFQIKDDLLDVE 728


>gi|325134983|gb|EGC57614.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M13399]
 gi|325202853|gb|ADY98307.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240149]
 gi|325208846|gb|ADZ04298.1| octaprenyl-diphosphate synthase [Neisseria meningitidis NZ-05/33]
          Length = 324

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|228938725|ref|ZP_04101329.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971607|ref|ZP_04132230.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228788130|gb|EEM36086.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228820966|gb|EEM66987.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
          Length = 305

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 28  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166
           + ++ +  A+  G+ L   + E I+        NI   +   +L+H I    +  G++  
Sbjct: 85  NAKWGDRIAMYTGDYLFAKSLECIT--------NIEIPEAHQALSHTI--LEVCKGEIEQ 134

Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+
Sbjct: 135 IKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQI 194

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE L K
Sbjct: 195 IDDILDFVSTEEKLGK 210


>gi|282165107|ref|YP_003357492.1| polyprenyl synthetase [Methanocella paludicola SANAE]
 gi|282157421|dbj|BAI62509.1| polyprenyl synthetase [Methanocella paludicola SANAE]
          Length = 313

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 9/192 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L   +RYAL L GK+IR+ ++T        +   A+    A+E +H  SL+ DD+  +D 
Sbjct: 35  LSEVVRYALSLKGKRIRTTVLTLSCEAAGGDMERAMAPAMAVEMLHNTSLVLDDI--IDK 92

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             IRRGK T++ ++    A+IA + +L+ A   I+     L     ++ M+    +  L+
Sbjct: 93  SDIRRGKATINNRWGNEMALIACDVMLSLAIREITRSDLGL-----TKQMIDCVADSMLR 147

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            +  G+ L+++ +       + I   KT +L   + ESGA++ +A Q   + L+ +G +L
Sbjct: 148 -LAEGEALELEKKKFTIDDYYKIADKKTASLFSASAESGALVGNADQKYVKALQQYGRSL 206

Query: 218 GIIFQLADDLLD 229
           G+ FQ  DD+LD
Sbjct: 207 GLAFQARDDILD 218


>gi|9711345|dbj|BAB07816.1| geranyl geranyl diphosphate synthase [Kitasatospora griseola]
          Length = 348

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 87/182 (47%), Gaps = 12/182 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR+ L    A     +   A+    A+E +H +SL+HDD+  MD    RRG+PTV  
Sbjct: 65  GKMIRAALTVLAAEACGGDVQRAVCGAVAVELVHNFSLLHDDV--MDGDLERRGRPTVWA 122

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 AI+AG+ LL     I+           R+     LT  I    +  GQM D+  
Sbjct: 123 TLGVPAAILAGDVLLARGCAILEGDSEH-----RTWATELLTETIAT--LAEGQMADVAF 175

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E    I   +   + + KT AL+  ACE GA ++      +ERL  FG +LG+ FQL DD
Sbjct: 176 EHRTTISLEEALAVSEAKTAALLSCACELGAGLSGGGAEARERLAKFGWHLGMAFQLVDD 235

Query: 227 LL 228
           +L
Sbjct: 236 VL 237


>gi|229016870|ref|ZP_04173798.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1273]
 gi|229023076|ref|ZP_04179590.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1272]
 gi|228738222|gb|EEL88704.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1272]
 gi|228744431|gb|EEL94505.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1273]
          Length = 320

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++   ++ D  ++     L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITN--IEIPDAHQA-----LSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|222054630|ref|YP_002536992.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
 gi|221563919|gb|ACM19891.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
          Length = 322

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L+   A L        + + + IE IH  +L+HDD+  +DN  +RRG  + +
Sbjct: 41  GGKRIRPALLLLSAKLCGYTGNRNVALASVIEFIHTATLLHDDV--VDNANLRRGIASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++ +       +++   +LS    I  +G +  Q++   
Sbjct: 99  TLWGNEASVLVGDFLFSKSFSLMVADG-----DLKILKVLSGATTIIAEGEVL-QLICTS 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + K KT  L+  AC+SGAI+  AS   +  L+ FG +LGI FQL DD L
Sbjct: 153 DLDLTLERYIEVVKAKTAILLSAACQSGAILGQASSQHETALQEFGMDLGIAFQLMDDTL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|148273991|ref|YP_001223552.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147831921|emb|CAN02892.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 357

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 93/199 (46%), Gaps = 19/199 (9%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L  GGK++R  L    A L   N    +    AIE  H  SL HDD+  MD   +RR
Sbjct: 64  RYLLAAGGKRVRPMLALLIAQLGEGNTQQVVDAAVAIEITHLASLYHDDV--MDEADMRR 121

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLSLTH-NIGLQG 158
           G P+    +    AI+AG+ L   A +I++   P+  +L+     +L+L   H  IG + 
Sbjct: 122 GVPSAQAVWGNSVAILAGDLLFARASKIVADLGPRAIRLQAATFERLVLGQLHETIGPR- 180

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
                  D QD          +   KTG+L+  A + G I + A    +  +  FGE  G
Sbjct: 181 -------DDQDPI---EHYLDVLADKTGSLIACAAQMGVIYSGADPELESAVLAFGERTG 230

Query: 219 IIFQLADDLLDCEEDLPKK 237
           + FQL DD+LD   D P++
Sbjct: 231 VAFQLVDDVLDL-ADQPEE 248


>gi|163939429|ref|YP_001644313.1| heptaprenyl diphosphate synthase component II [Bacillus
           weihenstephanensis KBAB4]
 gi|229010921|ref|ZP_04168117.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM
           2048]
 gi|229058249|ref|ZP_04196637.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH603]
 gi|229132421|ref|ZP_04261275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST196]
 gi|229166460|ref|ZP_04294216.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH621]
 gi|163861626|gb|ABY42685.1| Heptaprenyl diphosphate synthase component II [Bacillus
           weihenstephanensis KBAB4]
 gi|228617034|gb|EEK74103.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH621]
 gi|228651127|gb|EEL07108.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST196]
 gi|228720113|gb|EEL71697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH603]
 gi|228750321|gb|EEM00151.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM
           2048]
          Length = 320

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++   ++ D  ++     L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITN--IEIPDAHQA-----LSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|118477067|ref|YP_894218.1| heptaprenyl diphosphate synthase, component II [Bacillus
           thuringiensis str. Al Hakam]
 gi|118416292|gb|ABK84711.1| heptaprenyl diphosphate synthase, component II [Bacillus
           thuringiensis str. Al Hakam]
          Length = 323

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 46  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 213

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 214 DDILDFVSTEEKLGK 228


>gi|21674031|ref|NP_662096.1| polyprenyl synthetase [Chlorobium tepidum TLS]
 gi|21647180|gb|AAM72438.1| polyprenyl synthetase [Chlorobium tepidum TLS]
          Length = 324

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 23/201 (11%)

Query: 44  RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L   GK+IR  LV   A +    H    R    +E +H  +LIHDD+  +D   +RR
Sbjct: 37  RYVLRQQGKQIRPTLVILAAKVCGGVHDVTYRGAIMVELLHSATLIHDDV--VDGAEMRR 94

Query: 103 GKPTVHIQYDEVTAIIAGNGLLT----YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
           G P+++  +    +++ G+ LL+    Y+ E           + RS  ++S      ++ 
Sbjct: 95  GIPSINALWKNKISVLIGDYLLSKGLLYSLE---------NKDYRSLHLVSE----AVRR 141

Query: 159 MLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           M  G++L IQ      I E     +   KTG+L+  +C  GA  +  S++E   L+ +GE
Sbjct: 142 MSEGEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASSTDSEDEIASLKSYGE 201

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
            LG+ FQ+ DDLLD   D  K
Sbjct: 202 FLGLAFQIRDDLLDYTGDSKK 222


>gi|30261609|ref|NP_843986.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Ames]
 gi|47526809|ref|YP_018158.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|65318879|ref|ZP_00391838.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
           str. A2012]
 gi|165869531|ref|ZP_02214190.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0488]
 gi|167633294|ref|ZP_02391619.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0442]
 gi|167639098|ref|ZP_02397371.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0193]
 gi|170686048|ref|ZP_02877270.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0465]
 gi|170706518|ref|ZP_02896978.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0389]
 gi|177650331|ref|ZP_02933298.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0174]
 gi|190568668|ref|ZP_03021573.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           Tsiankovskii-I]
 gi|196033307|ref|ZP_03100719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W]
 gi|196038886|ref|ZP_03106193.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           NVH0597-99]
 gi|196046652|ref|ZP_03113876.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           03BB108]
 gi|206975027|ref|ZP_03235942.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           H3081.97]
 gi|218902725|ref|YP_002450559.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH820]
 gi|222095243|ref|YP_002529303.1| heptaprenyl diphosphate synthase component ii [Bacillus cereus Q1]
 gi|225863477|ref|YP_002748855.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           03BB102]
 gi|227815639|ref|YP_002815648.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. CDC 684]
 gi|228932902|ref|ZP_04095767.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229195814|ref|ZP_04322574.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           m1293]
 gi|229602685|ref|YP_002866017.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0248]
 gi|254683101|ref|ZP_05146962.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. CNEVA-9066]
 gi|254723689|ref|ZP_05185475.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A1055]
 gi|254734450|ref|ZP_05192162.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Western North America USA6153]
 gi|254740861|ref|ZP_05198549.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Kruger B]
 gi|254755099|ref|ZP_05207133.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Vollum]
 gi|254759636|ref|ZP_05211660.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Australia 94]
 gi|301053151|ref|YP_003791362.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           CI]
 gi|30255463|gb|AAP25472.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Ames]
 gi|47501957|gb|AAT30633.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|164714971|gb|EDR20489.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0488]
 gi|167512888|gb|EDR88261.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0193]
 gi|167531332|gb|EDR94010.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0442]
 gi|170128616|gb|EDS97483.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0389]
 gi|170669745|gb|EDT20486.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0465]
 gi|172083475|gb|EDT68535.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0174]
 gi|190560268|gb|EDV14248.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           Tsiankovskii-I]
 gi|195993741|gb|EDX57697.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W]
 gi|196022585|gb|EDX61268.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           03BB108]
 gi|196030031|gb|EDX68631.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           NVH0597-99]
 gi|206747046|gb|EDZ58438.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           H3081.97]
 gi|218538499|gb|ACK90897.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH820]
 gi|221239301|gb|ACM12011.1| heptaprenyl diphosphate synthase component II [Bacillus cereus Q1]
 gi|225790502|gb|ACO30719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           03BB102]
 gi|227004676|gb|ACP14419.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. CDC 684]
 gi|228587711|gb|EEK45769.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           m1293]
 gi|228826705|gb|EEM72474.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229267093|gb|ACQ48730.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0248]
 gi|300375320|gb|ADK04224.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           biovar anthracis str. CI]
 gi|324325630|gb|ADY20890.1| heptaprenyl diphosphate synthase component II [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 320

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|239929586|ref|ZP_04686539.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
 gi|291437911|ref|ZP_06577301.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
 gi|291340806|gb|EFE67762.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
          Length = 336

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLSAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVASAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++D   A++ G+ L + A  I++    +    +R Q           + ++ GQ+L   
Sbjct: 111 ARWDNSVAVLTGDFLFSRASHILADLGPE---AVRVQAE-------AFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +C  GA+M+   +   + L  +GE LG+
Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGTDETVVDVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|49184441|ref|YP_027693.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Sterne]
 gi|49481018|ref|YP_035730.1| heptaprenyl diphosphate synthase component II [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49178368|gb|AAT53744.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Sterne]
 gi|49332574|gb|AAT63220.1| heptaprenyl diphosphate synthase component II [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 323

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 46  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 103 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 153

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 154 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 213

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 214 DDILDFVSTEEKLGK 228


>gi|296104900|ref|YP_003615046.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059359|gb|ADF64097.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 323

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAARAVGYQGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTAAQEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|32474678|ref|NP_867672.1| polyprenyl synthase [Rhodopirellula baltica SH 1]
 gi|32445217|emb|CAD75219.1| polyprenyl synthase [Rhodopirellula baltica SH 1]
          Length = 397

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 22/200 (11%)

Query: 48  LGGKKIRSFLVTECASLFNV-----NHLTA---------LRVGAAIECIHCYSLIHDDLP 93
           LGGK++R  L+    +  +      N LT          + +   +E +H  +LIHDD+ 
Sbjct: 103 LGGKRLRPALLLLSGAAMHADRTSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDV- 161

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RR  PT++ ++++ T+I+ G+ L   +F + ++  + L   +  Q    +   
Sbjct: 162 -LDKAATRRHVPTINARWNDDTSILLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEG 220

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L+ +LG   LDI     DE     I + KT  L   +C+ GA ++   +++ E    F
Sbjct: 221 -ELRQVLGRDWLDI-----DEETYLDIIRGKTAELTRVSCQIGADLSGGDESQVEAFARF 274

Query: 214 GENLGIIFQLADDLLDCEED 233
           G +LGI FQ+ADD LD   D
Sbjct: 275 GNDLGIAFQIADDFLDLWGD 294


>gi|296535664|ref|ZP_06897840.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957]
 gi|296264015|gb|EFH10464.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957]
          Length = 347

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A L        + + A +E IH  +L+HDD+  +D   +RRG+ + +
Sbjct: 66  GGKRLRPLLVLAAARLCGYRGQRHVGLAACVEFIHTATLLHDDV--VDESDLRRGQASAN 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L   AF+++++  + ++ D     ++   +  I    +L  Q++  
Sbjct: 124 AIFGNKASVLVGDFLFARAFQLMTADGSLEVLD-----ILCGASATIAEGEVL--QLVIQ 176

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E Q   + + KT AL   A   GA++A   + E + L  +G N GI FQL DD 
Sbjct: 177 NDTSSTEAQYLEVIEGKTAALFAAATRVGAVVAERPKAEADALEAYGRNFGIAFQLVDDA 236

Query: 228 LD 229
           LD
Sbjct: 237 LD 238


>gi|254805638|ref|YP_003083859.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14]
 gi|254669180|emb|CBA07918.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14]
 gi|325145122|gb|EGC67404.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013]
 gi|325205404|gb|ADZ00857.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M04-240196]
          Length = 324

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|193070326|ref|ZP_03051269.1| octaprenyl-diphosphate synthase [Escherichia coli E110019]
 gi|192956385|gb|EDV86845.1| octaprenyl-diphosphate synthase [Escherichia coli E110019]
          Length = 323

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+   +  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAAAQCSGILVGCTPEEEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|329956361|ref|ZP_08296958.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
 gi|328524258|gb|EGF51328.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
          Length = 324

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+N      L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLYNEICPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++ G+ LL  A   +           R+  ++ +  N+G Q +  G++L   +
Sbjct: 103 IFNNKVAVLTGDYLLATALVEVGMT--------RNYAIIDVVSNLG-QDLAEGELLQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    E   F + + KT  L     ++GA+   AS  + E  R FGE +G+ FQ+ DD
Sbjct: 154 VSNPEYSEDIYFDVIRKKTAVLFAACMKAGALSVGASDEKAEYARLFGEYIGLCFQIKDD 213

Query: 227 LLDCEE 232
           + D  E
Sbjct: 214 IFDYYE 219


>gi|269837416|ref|YP_003319644.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786679|gb|ACZ38822.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 346

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 10/184 (5%)

Query: 50  GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK+IR  + V  CA+    +   A+   A+IE +H ++L+HDD+   D    RR +PTV 
Sbjct: 57  GKRIRPLICVLACAAAGG-DPDVAVPTAASIELLHNFTLVHDDV--QDGSDRRRHRPTVW 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQMLDI 167
             +    AI AG+ L  +A   +    +  +    ++++ ++   N  +  ++ GQ+LD+
Sbjct: 114 ALWGVGQAINAGDAL--FALSQLPLLGSHARGVPPARVIGVAREFNATVLRIVEGQVLDL 171

Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             E   E  V     M   KT +L+ FA  SGA++A A     ER R FG  LG+ FQ+ 
Sbjct: 172 CFEERWEIPVASYLNMIEGKTASLVAFAAWSGAVLAGADAERAERYRAFGRALGLGFQVQ 231

Query: 225 DDLL 228
           DDLL
Sbjct: 232 DDLL 235


>gi|47565976|ref|ZP_00237014.1| heptaprenyl diphosphate syntase component II [Bacillus cereus
           G9241]
 gi|228984692|ref|ZP_04144865.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155179|ref|ZP_04283291.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
           4342]
 gi|47556893|gb|EAL15223.1| heptaprenyl diphosphate syntase component II [Bacillus cereus
           G9241]
 gi|228628306|gb|EEK85021.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
           4342]
 gi|228775086|gb|EEM23479.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 320

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|293398312|ref|ZP_06642503.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62]
 gi|291611236|gb|EFF40320.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62]
          Length = 324

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|119504128|ref|ZP_01626209.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
 gi|119460131|gb|EAW41225.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
          Length = 297

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 13/200 (6%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSM 95
           L  A+ YA+  GG ++R  L    A L N N    L   AA  IE +HC SL+HDDLP  
Sbjct: 33  LAKALDYAVFPGGARVRPRLCLAVA-LANGNSEPRLASAAAAAIELLHCASLVHDDLPCF 91

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNI 154
           D+   RRGKP++H  + +  A+++G+ L+  AF+ ++   + +   +R +Q+   +   +
Sbjct: 92  DDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGV 151

Query: 155 -GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            G  G+  GQ  + +       ++    + KTGAL   A  +GA  A       E  R  
Sbjct: 152 GGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVP---SEPWREL 204

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G  +Q+ADD+ D   D
Sbjct: 205 GNSIGEAYQVADDIQDAIAD 224


>gi|14625004|dbj|BAB61882.1| farnesyl diphosphate synthase [Rhodovulum strictum]
          Length = 138

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 7/127 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH+++DE TA++ G+ L T AFE+++ P       +R  L+ +L    G+ GM
Sbjct: 12  LRRGLPTVHLKWDEGTALLVGDALQTLAFEMLADPACHPDPAVRIDLVAALARASGIDGM 71

Query: 160 LGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ  DI  E         ++  +Q  KTGAL+ ++ E+GA +  A   +   L  +  
Sbjct: 72  VLGQAQDIAAETAGRALSLAEITELQANKTGALIRWSAEAGARLGGA---DIAPLSAYAT 128

Query: 216 NLGIIFQ 222
            LG+ F+
Sbjct: 129 ALGLAFR 135


>gi|327537714|gb|EGF24422.1| Trans-hexaprenyltranstransferase [Rhodopirellula baltica WH47]
          Length = 326

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 22/200 (11%)

Query: 48  LGGKKIRSFLVTECASLFNV-----NHLTA---------LRVGAAIECIHCYSLIHDDLP 93
           LGGK++R  L+    +  +      N LT          + +   +E +H  +LIHDD+ 
Sbjct: 32  LGGKRLRPALLLLSGAAMHADRTSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDV- 90

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RR  PT++ ++++ T+I+ G+ L   +F + ++  + L   +  Q    +   
Sbjct: 91  -LDKAATRRHVPTINARWNDDTSILLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEG 149

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L+ +LG   LDI     DE     I + KT  L   +C+ GA ++   +++ E    F
Sbjct: 150 -ELRQVLGRDWLDI-----DEETYLDIIRGKTAELTRVSCQIGADLSGGDESQVEAFARF 203

Query: 214 GENLGIIFQLADDLLDCEED 233
           G +LGI FQ+ADD LD   D
Sbjct: 204 GNDLGIAFQIADDFLDLWGD 223


>gi|307564820|ref|ZP_07627348.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
 gi|307346542|gb|EFN91851.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
          Length = 326

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 10/200 (5%)

Query: 35  HNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H D LL+ + + +   GGK++R  L+   A  F     T       +E +H  SLIHDD+
Sbjct: 28  HEDGLLTQVLHHIKQRGGKRMRPILILLIAKSFGKVSPTTQHAAVGLELLHTASLIHDDV 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG+ +V+  Y+   A++ G+ +L+ A + +    +       ++L  +L+ 
Sbjct: 88  --VDESNERRGQASVNASYNNKVAVLVGDYVLSTALQQVGYTNSNSIVKYLAELGQTLSD 145

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              LQ      + +I+ E I E     I   KT  L       GA  A  S+ +    R 
Sbjct: 146 GEILQ------LSNIKREEITEAAYLEIIARKTAILFEICAAIGAESAGVSEEDVALARA 199

Query: 213 FGENLGIIFQLADDLLDCEE 232
           FG+N+G+IFQ+ DD+ D  E
Sbjct: 200 FGKNIGMIFQIRDDIFDYFE 219


>gi|227821037|ref|YP_002825007.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234]
 gi|227340036|gb|ACP24254.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234]
          Length = 338

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASMFGYEGDAHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A AS+ ++  L+ +G NLG+ FQL DD+L
Sbjct: 175 DDYL------QVIRAKTAALFAAAAEVGPIVASASRADRNALKSYGMNLGLAFQLVDDVL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|40062934|gb|AAR37805.1| polyprenyl synthetase [uncultured marine bacterium 442]
          Length = 292

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 13/200 (6%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSM 95
           L  A+ YA+  GG ++R  L    A L N N    L   AA  IE +HC SL+HDDLP  
Sbjct: 28  LAKALDYAVFPGGARVRPRLCLAVA-LANGNSEPRLASAAAAAIELLHCASLVHDDLPCF 86

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNI 154
           D+   RRGKP++H  + +  A+++G+ L+  AF+ ++   + +   +R +Q+   +   +
Sbjct: 87  DDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGV 146

Query: 155 -GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            G  G+  GQ  + +       ++    + KTGAL   A  +GA  A       E  R  
Sbjct: 147 GGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVP---SEPWREL 199

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G  +Q+ADD+ D   D
Sbjct: 200 GNSIGEAYQVADDIQDAIAD 219


>gi|228926644|ref|ZP_04089713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228945213|ref|ZP_04107569.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090575|ref|ZP_04221810.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-42]
 gi|229121156|ref|ZP_04250393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           95/8201]
 gi|229138307|ref|ZP_04266902.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST26]
 gi|229183808|ref|ZP_04311025.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC
           6E1]
 gi|228599657|gb|EEK57260.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC
           6E1]
 gi|228645199|gb|EEL01436.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST26]
 gi|228662275|gb|EEL17878.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           95/8201]
 gi|228692778|gb|EEL46502.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-42]
 gi|228814448|gb|EEM60713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228833020|gb|EEM78588.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 305

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 28  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166
           + ++ +  A+  G+ L   + E I+        NI   +   +L+H I    +  G++  
Sbjct: 85  NAKWGDRIAMYTGDYLFAKSLECIT--------NIEIPEAHQALSHTI--LEVCKGEIEQ 134

Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+
Sbjct: 135 IKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQI 194

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE L K
Sbjct: 195 IDDILDFVSTEEKLGK 210


>gi|332994564|gb|AEF04619.1| Geranylgeranyl pyrophosphate synthase [Alteromonas sp. SN2]
          Length = 324

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    + +     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLSARAMGIENADHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ S K      +R   +LS   N   +G +  Q+++  
Sbjct: 101 AVFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMDILSEATNQIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E + F +   KT  L   A +  A++    +N +  ++ +G++LG  FQLADD+L
Sbjct: 155 DASTTEARYFDVIYGKTARLFEAATQLAAVLTDQPENVEHAMQEYGKHLGTAFQLADDIL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYMAD 219


>gi|329769096|ref|ZP_08260517.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325]
 gi|328839442|gb|EGF89019.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325]
          Length = 315

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 16/224 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASL--F 65
           L++  + +  +L D+ + T S      +++L   I+ Y   GGK++R  L+  C+ L  F
Sbjct: 2   LKQYDELVQEVLKDIFVITKSE-----DEKLNQVIKKYFSAGGKRVRVLLLLICSKLGDF 56

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N N    +R+ + +E IH  SLIHDD+  +D    RRG  T++ ++ +  A++ G+ L +
Sbjct: 57  NNNKKNIIRMASIVEIIHTASLIHDDI--IDKAETRRGNITLNKEFGDEFALLVGDYLFS 114

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
                +S  + +L   I S L  +L      + +    + ++    +D  +     K KT
Sbjct: 115 IVLREVSEFENEL---IHSYLATTLKELCIGELIQEDGLYNLNTRRLDYLRKI---KRKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L+ FA  SG+I++ A + + +    FG  LG+ +Q+ DD LD
Sbjct: 169 AILIAFATVSGSIISGAKKEDVDSSYRFGYYLGMSYQIIDDYLD 212


>gi|126642763|ref|YP_001085747.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978]
 gi|126388647|gb|ABO13145.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978]
          Length = 325

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A   +++++  A R+ A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAARACDLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +  ++  TA++ G+ L+  AF+++   +  T LKD            + G   +  G++L
Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152

Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +Q +      +ET + +I   KT  L   A E  AI+A   +  +E LR F  + G  F
Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 211 QIIDDILDYTSD 222


>gi|11499146|ref|NP_070380.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM
           4304]
 gi|2649009|gb|AAB89695.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM
           4304]
          Length = 292

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 15/195 (7%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++   + YA+  GGK+ R  +V   A L   ++   + +  ++E IH  SL+HDD+  +D
Sbjct: 27  KIKKGLAYAITAGGKRSRPVIVLLSAKLCGGDYADVMNLALSVELIHTASLVHDDV--ID 84

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RR +  +H +YD   AI+ G+ L++ + E+ S    ++   IR         N+G+
Sbjct: 85  KAEKRRKREALHKKYDISLAIVLGDWLISKSVELTSKYGEEI---IRD------FSNVGM 135

Query: 157 QGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
             M  G++LDI    E   E   F   + KT AL  ++ +S   +    +   ++L  +G
Sbjct: 136 M-MSEGEVLDIYSIKENFTEKDYFECIEKKTAALFAYSAKSACKIVCEDRIAADKLFDYG 194

Query: 215 ENLGIIFQLADDLLD 229
            NLGI +Q+ DDLL+
Sbjct: 195 LNLGIAYQIVDDLLE 209


>gi|182436757|ref|YP_001824476.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326777352|ref|ZP_08236617.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465273|dbj|BAG19793.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326657685|gb|EGE42531.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 336

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   +   + +    +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L   
Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +   GA+M+ A +   + L  +GE LGI
Sbjct: 161 GPRDGRDPVDHYLD------VLSGKTGSLVAVSGRFGAMMSGADERTVDVLTQYGERLGI 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|49473966|ref|YP_032008.1| octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse]
 gi|49239469|emb|CAF25820.1| Octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse]
          Length = 356

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F+  +   +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 75  GGKRLRPMITLASAHMFDYQNDGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTAR 132

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +I+ G+ LL  AF+++    +     I +  +L+    I  +G +  Q+  ++
Sbjct: 133 MIWGNQASILVGDFLLGQAFKLMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAVK 186

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +     +    I   KT AL   A E G I+A     E+  LR +G  LG+ FQL DD+L
Sbjct: 187 NIETSTSDYLKIINAKTAALFSAAAEVGPIIAGYKYKERFALREYGTLLGLAFQLIDDVL 246

Query: 229 D 229
           D
Sbjct: 247 D 247


>gi|114566500|ref|YP_753654.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337435|gb|ABI68283.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 313

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK +R  L+   AS +  + L    +G A+E IH  SL+HDD+  +D    RRG+ +++
Sbjct: 19  SGKMLRPRLLYLAASPYPHDPLMVRDMGVAVELIHLASLVHDDV--IDQALTRRGQESIN 76

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            +Y+  T+++ G+ L   AF +I+  P  Q+ D I   + L          M  G++  +
Sbjct: 77  SRYNNKTSVLTGDLLFATAFNLINQHPFPQVMDQITRTIQL----------MCQGEIKQL 126

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              F   + E + +     KT  L   +C  GA ++   +     L  +G  LG  +Q+ 
Sbjct: 127 SLAFNLDVSEEEYYEKSYSKTACLFACSCRVGAWISSMPEKYASLLEEYGLYLGYAYQII 186

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 187 DDILDLVAD 195


>gi|161506132|ref|YP_001573244.1| hypothetical protein SARI_04320 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867479|gb|ABX24102.1| hypothetical protein SARI_04320 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 498

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 10/198 (5%)

Query: 38  RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+  +
Sbjct: 205 QLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--V 262

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   N+ 
Sbjct: 263 DESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVI 317

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ +G 
Sbjct: 318 AEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGR 376

Query: 216 NLGIIFQLADDLLDCEED 233
            LG  FQL DDLLD   D
Sbjct: 377 YLGTAFQLIDDLLDYSAD 394


>gi|311277840|ref|YP_003940071.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
 gi|308747035|gb|ADO46787.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
          Length = 323

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKILEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   ++A  S  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQCSGLLAGCSDAQEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|319944647|ref|ZP_08018914.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599]
 gi|319742086|gb|EFV94506.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599]
          Length = 329

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIR 101
           GGK++R  L+T  A           R       + A +E IH  +L+HDD+  +D   +R
Sbjct: 43  GGKRLRPVLLTLFARALGYGQTEQQRAQGHHWLMAAVVEFIHTATLLHDDI--VDESTLR 100

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG PT + Q+    +++ G+ L + +F+++        + +     L+   N+  +G + 
Sbjct: 101 RGAPTANAQFGNAASVLVGDFLYSRSFQMMVE-----VEQLHILKTLADATNVIAEGEVL 155

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            Q+L+  D  +DE     + + KT  L   +   GA++A A+   ++    +G +LG  F
Sbjct: 156 -QLLNCNDPDVDEAAYLQVIRFKTAKLFEASARIGAVLAGATPELEDAAAAYGRHLGTAF 214

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 215 QIIDDVLD 222


>gi|73662585|ref|YP_301366.1| heptaprenyl diphosphate syntase component II [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|72495100|dbj|BAE18421.1| putative heptaprenyl diphosphate syntase component II
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 317

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +D++L A  + L   GGK++R   V   +      +    RV   +E IH  +L+HDD+ 
Sbjct: 24  HDKVLEAASHHLFSSGGKRVRPAFVILSSQFGKEMNEDVYRVAVTLELIHMATLVHDDV- 82

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG  T+  ++D+ TAI+ GN LL    E IS+ +      + S+ ++ +   
Sbjct: 83  -IDKSDKRRGSLTISKKWDQNTAILTGNFLLARGLEHISNIEANRVHAVISRAIVEVCM- 140

Query: 154 IGLQGMLGGQMLDIQDEFI-DETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERL 210
                   G++   QD+F   +T    ++++  KT  L+  + E GAI + A       L
Sbjct: 141 --------GELYQFQDQFNGHQTITNYLRRINRKTALLIQLSTEVGAITSGADAKTVHNL 192

Query: 211 RCFGENLGIIFQLADDLLD 229
           +  G  +G+ FQ+ DD+LD
Sbjct: 193 KMIGHYIGMSFQIVDDILD 211


>gi|240017367|ref|ZP_04723907.1| IspB [Neisseria gonorrhoeae FA6140]
          Length = 324

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIRVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|229102217|ref|ZP_04232926.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-28]
 gi|228681118|gb|EEL35286.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-28]
          Length = 320

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E +++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECVTNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|169831509|ref|YP_001717491.1| trans-hexaprenyltranstransferase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638353|gb|ACA59859.1| Trans-hexaprenyltranstransferase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 318

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 13/221 (5%)

Query: 16  IDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72
           +D + DDL +++   +   + N++LL+     L   GGK++R  L    A  +N +    
Sbjct: 5   LDVVRDDLDIVERELYAVLKSNNQLLTESSSHLFRAGGKRLRPALALLSAKFYNYDLQKV 64

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +  A+E +H  +L+HDD+  +D   +RRG PTV  ++    ++  G+ LL  A  ++S
Sbjct: 65  LPLAMALELVHLATLVHDDV--VDGAELRRGIPTVKARWGNKVSVHTGDYLLAKAMILVS 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
             ++ +   + +   + +     +Q   G    D++D ++         K KT  L+  A
Sbjct: 123 VYRSPVIIGVLAHSCVKMCEGEIIQ-FAGLNQCDLRD-YLRRI------KYKTALLIQAA 174

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           C+ GA+   A +   + L  FG  LG+ FQ+ DD+LD   D
Sbjct: 175 CQLGAVATGAPRELYKPLGRFGHCLGMAFQITDDILDMVAD 215


>gi|90408282|ref|ZP_01216447.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3]
 gi|90310583|gb|EAS38703.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3]
          Length = 325

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   NV+     ++ A IE +H  +L+HDD+  +D   +RRGK T +
Sbjct: 45  GGKRIRPLITILAAKALNVHSEKITKLAAIIEFVHTATLLHDDV--VDESDLRRGKKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++S  +     N++   +LS   NI  +G +  Q+++  
Sbjct: 103 ALFGNAASVLVGDFLYTRSFQMMSELQ-----NLKVMDVLSRATNIIAEGEV-LQLMNCN 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     I   KT  L   A +   ++A  +   +  L  +G+ LG  FQL DD++
Sbjct: 157 DANISEKLYMDIIYYKTAKLFEAATQLVGVLAEQTPEIELALLNYGKYLGTAFQLTDDVM 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|59802000|ref|YP_208712.1| IspB [Neisseria gonorrhoeae FA 1090]
 gi|194099557|ref|YP_002002687.1| IspB [Neisseria gonorrhoeae NCCP11945]
 gi|239999762|ref|ZP_04719686.1| IspB [Neisseria gonorrhoeae 35/02]
 gi|240014919|ref|ZP_04721832.1| IspB [Neisseria gonorrhoeae DGI18]
 gi|240081510|ref|ZP_04726053.1| IspB [Neisseria gonorrhoeae FA19]
 gi|240113789|ref|ZP_04728279.1| IspB [Neisseria gonorrhoeae MS11]
 gi|240116523|ref|ZP_04730585.1| IspB [Neisseria gonorrhoeae PID18]
 gi|240118747|ref|ZP_04732809.1| IspB [Neisseria gonorrhoeae PID1]
 gi|240121989|ref|ZP_04734951.1| IspB [Neisseria gonorrhoeae PID24-1]
 gi|240124286|ref|ZP_04737242.1| IspB [Neisseria gonorrhoeae PID332]
 gi|240126497|ref|ZP_04739383.1| IspB [Neisseria gonorrhoeae SK-92-679]
 gi|240128960|ref|ZP_04741621.1| IspB [Neisseria gonorrhoeae SK-93-1035]
 gi|254494548|ref|ZP_05107719.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291]
 gi|260439720|ref|ZP_05793536.1| IspB [Neisseria gonorrhoeae DGI2]
 gi|268595575|ref|ZP_06129742.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02]
 gi|268597610|ref|ZP_06131777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19]
 gi|268599861|ref|ZP_06134028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11]
 gi|268602196|ref|ZP_06136363.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18]
 gi|268604462|ref|ZP_06138629.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1]
 gi|268682915|ref|ZP_06149777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332]
 gi|268685081|ref|ZP_06151943.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268687344|ref|ZP_06154206.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|291042968|ref|ZP_06568706.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2]
 gi|59718895|gb|AAW90300.1| putative octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA
           1090]
 gi|193934847|gb|ACF30671.1| IspB [Neisseria gonorrhoeae NCCP11945]
 gi|226513588|gb|EEH62933.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291]
 gi|268548964|gb|EEZ44382.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02]
 gi|268551398|gb|EEZ46417.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19]
 gi|268583992|gb|EEZ48668.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11]
 gi|268586327|gb|EEZ51003.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18]
 gi|268588593|gb|EEZ53269.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1]
 gi|268623199|gb|EEZ55599.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332]
 gi|268625365|gb|EEZ57765.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268627628|gb|EEZ60028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|291013107|gb|EFE05076.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2]
 gi|317165053|gb|ADV08594.1| IspB [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 324

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIRVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|302555532|ref|ZP_07307874.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
 gi|302473150|gb|EFL36243.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
          Length = 380

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A + +    T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 89  GGKAVRPALAVLSAEVMSAAPETGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 146

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L          + ++ GQ  DI 
Sbjct: 147 KVHGPAQAILVGDALFALANEMLLELGTVEAGRATRRL------TTATRALIDGQAQDIS 200

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 201 YEHRDRVTVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLERYGYHLGLAFQAVD 260

Query: 226 DLL 228
           DLL
Sbjct: 261 DLL 263


>gi|121704736|ref|XP_001270631.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           clavatus NRRL 1]
 gi|119398777|gb|EAW09205.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           clavatus NRRL 1]
          Length = 451

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 21/169 (12%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+    E IH  SL+HDD+  +DN   RR   + ++Q+    A++AG+ LL  A   
Sbjct: 190 TQRRLAEITELIHTASLLHDDV--IDNAVTRRSSNSANLQFGNKMAVLAGDFLLGRASVA 247

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK 182
           ++    +L+D   ++L+ ++  N     ++ G+ + ++    DE    F DET  + +QK
Sbjct: 248 LA----RLRDPEVTELLATVIAN-----LVEGEFMQLKNTAADEKNPVFTDETISYYLQK 298

Query: 183 --MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +KT +L+  +C + A++  ++    +    +G NLG+ FQL DDLLD
Sbjct: 299 TYLKTASLISKSCRAAALLGGSTPEVVDAAYAYGRNLGLAFQLVDDLLD 347


>gi|18645048|gb|AAL76349.1| geranyltranstransferase [uncultured marine proteobacterium]
          Length = 313

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 13/200 (6%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSM 95
           L  A+ YA+  GG ++R  L    A L N N    L   AA  IE +HC SL+HDDLP  
Sbjct: 49  LAKALDYAVFPGGARVRPRLCLAVA-LANGNSEPRLASAAAAAIELLHCASLVHDDLPCF 107

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNI 154
           D+   RRGKP++H  + +  A+++G+ L+  AF+ ++   + +   +R +Q+   +   +
Sbjct: 108 DDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAAGV 167

Query: 155 -GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            G  G+  GQ  + +       ++    + KTGAL   A  +GA  A       E  R  
Sbjct: 168 GGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVP---SEPWREL 220

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G  +Q+ADD+ D   D
Sbjct: 221 GNSIGEAYQVADDIQDAIAD 240


>gi|328884333|emb|CCA57572.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or
           Geranyltranstransferase (farnesyldiphosphate synthase)
           or Geranylgeranyl pyrophosphate synthetase [Streptomyces
           venezuelae ATCC 10712]
          Length = 336

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 9/187 (4%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  +
Sbjct: 51  LAGGKRFRPLLVMLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVDS 108

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + ++    A++ G+ L   A   ++    +    I+S+    L     L+     +  D
Sbjct: 109 ANTRWGNSIAVLTGDFLFARASHTLADLGPEAV-RIQSEAFERLVTGQILETAGPQEGRD 167

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             D ++D      +   KTG+L+  +C  GA+MA A ++  + L  +GE LG+ FQLADD
Sbjct: 168 PVDHYLD------VLGGKTGSLVAVSCRFGAMMAGADESVVDILTQYGERLGVAFQLADD 221

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 222 VLDIASD 228


>gi|300088362|ref|YP_003758884.1| polyprenyl synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528095|gb|ADJ26563.1| Polyprenyl synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 324

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 14/190 (7%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +R+ L GGK +R  L        + +    L +  A E +H  +L+HDD  ++D+   RR
Sbjct: 40  LRHILTGGKVLRPALTFLAGRCIDESTDRILNMATANELLHISTLVHDD--AIDHAATRR 97

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  TV+  +    AI+ G+ L   A E  ++      DN+R+  M S T    LQ +  G
Sbjct: 98  GHQTVNNVWGLEKAILLGDFLFARAGEYAAA-----TDNLRTVKMFSNT----LQTIAVG 148

Query: 163 QMLDIQDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++   +D F         F     KT +L+  + ESGA++   ++ + + L  FG NLG+
Sbjct: 149 ELRQAKDVFSPAQSREGYFKRIAGKTASLLKMSTESGAVLGSGTEEQIQALADFGWNLGM 208

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 209 AFQIVDDILD 218


>gi|290955843|ref|YP_003487025.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
 gi|260645369|emb|CBG68455.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
          Length = 350

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 59  GGKAVRPALAVMSAEVTGAAPEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L+  A EI+    T   +  R+   ++       + ++ GQ  DI 
Sbjct: 117 KVHGPAQAILVGDALMVLANEILLELGT--VEAARATRRVT----TATRALIDGQAQDIS 170

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  AC  GA++  A  +  + L  +G +LG+ FQ  D
Sbjct: 171 YEHRERVTVEECLEMEGNKTGALLACACSIGAVLGGADDHTADTLEKYGYHLGLAFQAVD 230

Query: 226 DLL 228
           DLL
Sbjct: 231 DLL 233


>gi|126173210|ref|YP_001049359.1| polyprenyl synthetase [Shewanella baltica OS155]
 gi|152999569|ref|YP_001365250.1| polyprenyl synthetase [Shewanella baltica OS185]
 gi|160874188|ref|YP_001553504.1| polyprenyl synthetase [Shewanella baltica OS195]
 gi|304410433|ref|ZP_07392051.1| Polyprenyl synthetase [Shewanella baltica OS183]
 gi|307304525|ref|ZP_07584275.1| Polyprenyl synthetase [Shewanella baltica BA175]
 gi|125996415|gb|ABN60490.1| Trans-hexaprenyltranstransferase [Shewanella baltica OS155]
 gi|151364187|gb|ABS07187.1| Polyprenyl synthetase [Shewanella baltica OS185]
 gi|160859710|gb|ABX48244.1| Polyprenyl synthetase [Shewanella baltica OS195]
 gi|304350917|gb|EFM15317.1| Polyprenyl synthetase [Shewanella baltica OS183]
 gi|306911927|gb|EFN42351.1| Polyprenyl synthetase [Shewanella baltica BA175]
 gi|315266420|gb|ADT93273.1| Polyprenyl synthetase [Shewanella baltica OS678]
          Length = 331

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L D+++   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMKVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATPEQETALGNYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|124494424|gb|ABN13312.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
          Length = 348

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR   V        +++N +    V   +E IH  SL+HDD+  +D+  +RRGKPT
Sbjct: 71  GGKRIRPVFVLLSGMFGDYDINKIKY--VAVTLEMIHMASLVHDDV--IDDAELRRGKPT 126

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  ++D   A+  G+ +L  + E+++         I SQ ++ +           G++  
Sbjct: 127 IKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCL---------GEIEQ 177

Query: 167 IQDEFIDET--QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+ ++  E   + ++ + K KT  L+  +C+ GAI + A +   + L  FG  +G+ +Q+
Sbjct: 178 IKGKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQI 237

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE+L K
Sbjct: 238 IDDILDFTSTEEELGK 253


>gi|303248764|ref|ZP_07335016.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ]
 gi|302489851|gb|EFL49780.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ]
          Length = 322

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 15/191 (7%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +R+ LL GGK++R  L    A            +  ++E +H  +L+HDD+  +D   +R
Sbjct: 34  VRHVLLAGGKRLRPLLAILVARALGHQEDDVYPLACSLEFLHSATLLHDDI--VDGATLR 91

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+P+ H ++     I+AG+ LL  A   ++         I S+ +L             
Sbjct: 92  RGRPSAHTRFGATHTILAGDVLLALANRTVAEYDDPELTRILSEALLQTA---------T 142

Query: 162 GQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           G++L+I   +D  +       I   KT  L+  AC  GA++A    N  E  +  G N G
Sbjct: 143 GEILEIAHLRDTDLPLDTYLSIITGKTAHLLQAACHCGAVLAGVDANLCEAAKTLGVNCG 202

Query: 219 IIFQLADDLLD 229
           I FQL DD LD
Sbjct: 203 IAFQLVDDALD 213


>gi|163867858|ref|YP_001609062.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476]
 gi|161017509|emb|CAK01067.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476]
          Length = 338

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMITLASAHMFGYQSDGHIKLATAVEFMHTATLLHDDV--IDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +I+ G+ LL  AF+++    +     I +  +L+    I  +G +  Q+   +
Sbjct: 115 MIWGNQASILVGDFLLGQAFKMMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +     +    I   KT AL   A E G I+A     E+  LR +G +LG+ FQL DD L
Sbjct: 169 NIKTSSSDYLKIINAKTAALFSAAAEVGPIVAGYGHKERSALREYGTSLGLAFQLIDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|83590100|ref|YP_430109.1| trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC
           39073]
 gi|83573014|gb|ABC19566.1| Trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC
           39073]
          Length = 322

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R       A          L +  A+E IH  +L+HDD+  +D   IRRG+PTV 
Sbjct: 43  GGKRLRPAFAILAARCCGAPLERILPLAVALEMIHMATLVHDDV--IDASPIRRGRPTVW 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++ +  ++  G+ L   +  ++++       ++ + + + +     +Q M     LDI 
Sbjct: 101 ARWGQELSLHTGDYLFARSLILVATYDDPRIPSVLASVSVKMVQG-EIQQMAAAFDLDIT 159

Query: 169 -DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             +++D          KT  L+  +CE GAI A A       LR +G NLG+ FQ+ DD+
Sbjct: 160 LRDYLDRIY------RKTALLIAASCELGAIAAGADTATIRHLRYYGRNLGLAFQITDDV 213

Query: 228 LDCEED 233
           LD   D
Sbjct: 214 LDMVAD 219


>gi|188996355|ref|YP_001930606.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931422|gb|ACD66052.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 317

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R +LV + + +  N N      + AA+E +H  SL+HDD+  +D   +RRGKPT 
Sbjct: 35  GGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEYLHTASLLHDDV--VDGSQLRRGKPTA 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           +  +   T ++ G+ L   A  + S     +  NI     +S T    ++ M  GQ+L+ 
Sbjct: 93  NRIFGNDTTVLTGDYLYANALYLFS-----IHGNIDMIKNVSQT----VKKMAEGQLLEL 143

Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             I D  I   + + I + KT AL    C  G  +   ++  K++   +G N+G+ FQ+ 
Sbjct: 144 KKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQKAFEYGLNIGMAFQIV 203

Query: 225 DDLLD 229
           DDLLD
Sbjct: 204 DDLLD 208


>gi|15676243|ref|NP_273375.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58]
 gi|161870743|ref|YP_001599916.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442]
 gi|218768897|ref|YP_002343409.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491]
 gi|7225547|gb|AAF40771.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58]
 gi|121052905|emb|CAM09257.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491]
 gi|161596296|gb|ABX73956.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442]
 gi|254670157|emb|CBA05202.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha153]
 gi|316984329|gb|EFV63303.1| polyprenyl synthetase family protein [Neisseria meningitidis
           H44/76]
 gi|319411198|emb|CBY91603.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase; OPP synthetase) [Neisseria meningitidis WUE
           2594]
 gi|325128912|gb|EGC51766.1| octaprenyl-diphosphate synthase [Neisseria meningitidis N1568]
 gi|325140975|gb|EGC63481.1| octaprenyl-diphosphate synthase [Neisseria meningitidis CU385]
 gi|325198983|gb|ADY94439.1| octaprenyl-diphosphate synthase [Neisseria meningitidis G2136]
 gi|325199520|gb|ADY94975.1| octaprenyl-diphosphate synthase [Neisseria meningitidis H44/76]
          Length = 324

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|148265763|ref|YP_001232469.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
 gi|146399263|gb|ABQ27896.1| Polyprenyl synthetase [Geobacter uraniireducens Rf4]
          Length = 322

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L+   A L   +    + + + IE IH  +L+HDD+  +DN  +RRG  + +
Sbjct: 41  GGKRIRPALLLLSAKLCGYHGDRHVPLASVIEFIHTATLLHDDV--VDNANLRRGLASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++ +       ++    +LS    I  +G +  Q++   
Sbjct: 99  TLWGNEASVLVGDFLFSKSFSLMVADG-----DLNVLKVLSGATTIIAEGEVL-QLVCTS 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + K KT  L+  AC+SGAI+  AS   +  L+ FG  LGI FQL DD L
Sbjct: 153 DLDVTTERYIEVVKSKTAILLSAACQSGAILGKASSEREVALQNFGMELGIAFQLVDDTL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|221633181|ref|YP_002522406.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156897|gb|ACM06024.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159]
          Length = 344

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 9/190 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + GK+ R  L T  AS    +   A+ + AAIE +H ++LIHDD+   D   +RR +PT+
Sbjct: 53  VSGKRFRPALCTAIASAVCGDAARAVGIAAAIELLHNFTLIHDDI--QDRSRLRRHRPTI 110

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              + +  AI AG+ L   +          L+ +  ++L+        L  ++ GQ+LD+
Sbjct: 111 WALWGDAQAINAGDALFVLSQIAALEAAQALEPSRGAELVRRFNETALL--IVEGQVLDL 168

Query: 168 QDEFIDETQV----FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             E   E  V     MI++ KT AL+ ++  +GA++A A      RL  FG  LG+ FQ+
Sbjct: 169 SFEQRPEVSVNEYLTMIER-KTAALIAYSAWAGALVAGAPAEVAARLERFGRALGLGFQI 227

Query: 224 ADDLLDCEED 233
            DD L    D
Sbjct: 228 RDDYLGVWGD 237


>gi|82395324|gb|ABB72030.1| decaprenyl diphosphate synthase [Sinorhizobium meliloti]
          Length = 338

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASMFGYEGDGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 TFWGNQASVLVGDFLLGQAFRMMVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A  S+ ++  L+ +G NLG+ FQL DD+L
Sbjct: 175 DDYL------RVNRAKTAALFAAASEVGPIVAGGSKADRNALKSYGTNLGLAFQLVDDVL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|148654702|ref|YP_001274907.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
 gi|148566812|gb|ABQ88957.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
          Length = 338

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 22/168 (13%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---- 127
           AL + AAI+ IH +SLIHDD+   D    RRG+PTV   +     I  G+G+ T A    
Sbjct: 73  ALPLAAAIQLIHDFSLIHDDI--QDQSDTRRGRPTVWKLWGLAQGINTGDGMFTVAHLSL 130

Query: 128 --FEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
               + S P   + D +R   + +L++           GQ LD+  E    IDE     +
Sbjct: 131 HRLALTSLPAATILDVLRRFDETILTICE---------GQFLDLSYEGNLEIDEAAYLAM 181

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            + KT AL+  + E GA++  A +   + L  FG  LG+ FQ+ DD+L
Sbjct: 182 IERKTAALIAASAELGALVGGADEETIQALSDFGRALGLAFQIEDDVL 229


>gi|294789130|ref|ZP_06754369.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453]
 gi|294482871|gb|EFG30559.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453]
          Length = 324

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     ++   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+A A+  ++  L+ FG  +G  FQ+ DD+L
Sbjct: 157 NIDITEAQYLQVIQYKTAKLFEAAAQVGAILAGATHEQETALKNFGMYMGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|329939715|ref|ZP_08289016.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
           M045]
 gi|329301285|gb|EGG45180.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
           M045]
          Length = 384

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 17/223 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  + +D++ + +      H   QH D   +A       GK IR  LV   A+    +  
Sbjct: 65  ELRRAVDSLPESMRRIGLYHFGWQHADGSPAAGN----AGKAIRPALVLTAAATLGGHRQ 120

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+R  AA+E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A  +
Sbjct: 121 AAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDSDAILAGDALQALAHRL 178

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKT 185
           ++      +D   +    +      +  +  GQ  D      + E +   +V  + + KT
Sbjct: 179 LA------EDPHPASAAAAARLASCVVELCAGQHADTALEERRPEDVTLEEVLAMAEAKT 232

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           GAL+  AC  GA+ A A   E E L  FG   G+ FQL DD++
Sbjct: 233 GALLGCACAMGALYAGAPHGEVEALDAFGRQAGLAFQLIDDVI 275


>gi|325203440|gb|ADY98893.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240355]
          Length = 324

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|190890586|ref|YP_001977128.1| octaprenyl-diphosphate synthase [Rhizobium etli CIAT 652]
 gi|190695865|gb|ACE89950.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CIAT 652]
          Length = 346

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 65  GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 123 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 182

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 183 DDYL------AVIRAKTAALFAAAAEVGPIVAEAGKSGRNALKSYGMNLGLAFQLVDDAL 236

Query: 229 D 229
           D
Sbjct: 237 D 237


>gi|111220885|ref|YP_711679.1| geranylgeranyl pyrophosphate synthetase [Frankia alni ACN14a]
 gi|111148417|emb|CAJ60089.1| geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           (GGPPSASE) (Geranylgeranyl diphosphate synthase)
           [Includes: Dimethylallyltranstransferase;
           Geranyltranstransferase; Farnesyltranstransferase]
           [Frankia alni ACN14a]
          Length = 338

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR +PT  
Sbjct: 53  GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + +     R+ L+L      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGDAARRAALIL----GAGVQDLVRGQAEDLM 164

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V    +M   KTGAL+  +   GA++A A     + L  +G  LG  FQL D
Sbjct: 165 FESRSDVTVADTLRMEDGKTGALLACSASLGAVLAGAGDEMVDALAEYGSRLGTAFQLID 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|239943496|ref|ZP_04695433.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 15998]
 gi|239989950|ref|ZP_04710614.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 11379]
 gi|291446967|ref|ZP_06586357.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291349914|gb|EFE76818.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 336

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   +   + +    +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L   
Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +   GA+M+ A +   + L  +GE LGI
Sbjct: 161 GPRDGRDPVDHYLD------VLSGKTGSLVAVSGRFGAMMSGADERTVDILTQYGERLGI 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|157148758|ref|YP_001456077.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895]
 gi|157085963|gb|ABV15641.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895]
          Length = 498

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 218 GGKRIRPMIAVLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 275

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 276 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 329

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   ++A  +  +++ L+ +G  LG  FQL DDLL
Sbjct: 330 DPDITEENYMRVIYSKTARLFEAAAQCSGLLAGCTPEQEKGLQDYGRYLGTAFQLIDDLL 389

Query: 229 DCEED 233
           D   D
Sbjct: 390 DYSAD 394


>gi|327192818|gb|EGE59745.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CNPAF512]
          Length = 338

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 175 DDYLS------VIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|238898823|ref|YP_002924505.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229466582|gb|ACQ68356.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 310

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 30  GGKRIRPMISILSARALNYKGDQHIIVAALIEFIHTATLLHDDV--VDKSDLRRGKKTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++   +     +R   ++S   N+  +G +  Q++   
Sbjct: 88  TVFGNSASVLVGDFIYTRAFQMMTDLGS-----MRILKVMSSATNVISEGEVQ-QLMYCN 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S AI+A AS  ++  L+ +G  LG  +QL DDLL
Sbjct: 142 NVNITEYDYMKVIYSKTARLFEAASQSAAILAKASPEQESALQSYGCYLGTTYQLIDDLL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|293610928|ref|ZP_06693227.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826580|gb|EFF84946.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123244|gb|ADY82767.1| octaprenyl-diphosphate synthase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 325

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A    ++++  A R+ A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAARACGLDNMANAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +  ++  TA++ G+ L+  AF+++   +  T LKD            + G   +  G++L
Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152

Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +Q +      +ET + +I   KT  L   A E  AI+A   +  +E LR F  + G  F
Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 211 QIIDDILDYTSD 222


>gi|217959091|ref|YP_002337639.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH187]
 gi|217065071|gb|ACJ79321.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH187]
          Length = 320

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +        S  +L +           G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSYTILEVCK---------GEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|206970523|ref|ZP_03231475.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH1134]
 gi|206734159|gb|EDZ51329.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH1134]
          Length = 320

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++      + ++ + K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|15614216|ref|NP_242519.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Bacillus halodurans C-125]
 gi|10174270|dbj|BAB05372.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Bacillus halodurans C-125]
          Length = 323

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 21/214 (9%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLI 88
           +Q +H+    +++     GGK+IR   V        ++VN L    +   +E IH  SL+
Sbjct: 25  VQARHDILRKASVHLLKAGGKRIRPVFVLLAGKFGTYDVNVLK--HIAVPLELIHMASLV 82

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D+  +RRGK T+  Q+D   A+  G+    Y F       T   D    Q++ 
Sbjct: 83  HDDV--IDDADLRRGKKTIKSQWDNRIAMYTGD----YMFAKAVQTATYFDDPNIHQIIS 136

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQN 205
           +      +  M  G++  I+D++     +   F   K KT  L+  +C+ GA+ A A   
Sbjct: 137 N-----AINEMCLGEVEQIRDQYNPNQHLRIYFRRIKRKTALLIAVSCQLGALAAKADPA 191

Query: 206 EKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
             ++L  FG  +G+ FQ+ DD+LD    EE L K
Sbjct: 192 IVQKLYYFGYYVGMSFQITDDVLDFVGTEEQLGK 225


>gi|262281247|ref|ZP_06059029.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257478|gb|EEY76214.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus
           RUH2202]
          Length = 325

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A    ++++  A R+ A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAARACGLDNMANAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +  ++  TA++ G+ L+  AF+++   +  T LKD            + G   +  G++L
Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152

Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +Q +      +ET + +I   KT  L   A E  AI+A   +  +E LR F  + G  F
Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 211 QIIDDILDYTSD 222


>gi|261391852|emb|CAX49311.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase; OPP synthetase) [Neisseria meningitidis
           8013]
          Length = 324

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|228951990|ref|ZP_04114087.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228807715|gb|EEM54237.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 305

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 28  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E I++ +         +   +L+H I    +  G++  I
Sbjct: 85  NAKWGDRIAMYTGDYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQI 135

Query: 168 QDEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++      + ++ + K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 136 KDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVNRLFWYGYFVGMSYQII 195

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 196 DDILDFVSTEEKLGK 210


>gi|156502468|ref|YP_001428533.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|290953802|ref|ZP_06558423.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312813|ref|ZP_06803545.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|156253071|gb|ABU61577.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 325

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   N N    L   A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 44  GGKRLRPLLVILFARALNYNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++ S      DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVSL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLA 224
           ++  + E +   +   KT  L   ACE   +++   Q+  +   R++ +G  LG  FQ+ 
Sbjct: 155 RNSELSEEEYIKVIYCKTAKLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQIT 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|325267223|ref|ZP_08133886.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394]
 gi|324981284|gb|EGC16933.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394]
          Length = 324

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     ++   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+A A   ++  L+ FG  +G  FQ+ DD+L
Sbjct: 157 NVDITEQQYLQVIQYKTAKLFEAAAQVGAILAGADDEQERALKEFGMYMGTAFQIVDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|305662643|ref|YP_003858931.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230]
 gi|304377212|gb|ADM27051.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230]
          Length = 346

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 13/223 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E + RI  I+D+ ++ T   + +   +   +A+ Y   GGK++R  +V   A +   +  
Sbjct: 20  EYASRISKIVDEFIMNTIRGIPSTLYE---AALHYLRAGGKRLRPLIVVLGARIVGGDED 76

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+   A++E +H ++L+HDD+  +D   +RRG PTVH  +    AI+AG+ L  Y++  
Sbjct: 77  IAIPGAASVEVLHTFTLVHDDI--IDKDELRRGVPTVHKIWGSDMAIVAGDLLYAYSYRC 134

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-----IQDEFIDETQVFMIQKMKT 185
           +     +     R    + +  +  +  +  GQ LD     +Q+  I++  + M++K KT
Sbjct: 135 LLRALERGVPVERVNKAIDILTDAAIT-VAEGQALDMLLPSMQNVSIND-YIEMVKK-KT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AL   +   GA +A   +     L+    N GI FQ+ DD+L
Sbjct: 192 AALFASSIAIGATLAGGDEKLTAILKESMINAGIAFQIRDDIL 234


>gi|91978222|ref|YP_570881.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
 gi|91684678|gb|ABE40980.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
          Length = 288

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 20/193 (10%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RL +A+R A+   G ++R  L    A +    N       GAA+E +HC SL+HDDLP  
Sbjct: 26  RLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPAATEAAGAALELMHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   IRRG+P+VH  + E  A++ G+ L+  AF+ I+      + N     +L LT  +G
Sbjct: 86  DGADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQTIA------RVNCAPDRLLKLTQVVG 139

Query: 156 LQ-----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G++ GQ  + + E      +    + KTGAL      + A  A ++  + E  
Sbjct: 140 GAVGVPLGIVAGQAWECESEI----NLAHYHRSKTGALF---VAATAAGAASAGADPEPW 192

Query: 211 RCFGENLGIIFQL 223
           R  GE +G  +Q+
Sbjct: 193 RLVGEKIGEAYQV 205


>gi|46447630|ref|YP_008995.1| putative geranyltranstransferase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46401271|emb|CAF24720.1| putative geranyltranstransferase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 269

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A  YALL GGK+ R  LV   A       +   +    +E  H  SLI DDLP MDN
Sbjct: 7   LRDACEYALLNGGKRFRPALVLMIAKALGF-QVDVSQAALCVEYFHTASLIADDLPCMDN 65

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-------MLSL 150
              RR  PT+H  + E T+++A   L+   +  ++     LKD+    +       +L+L
Sbjct: 66  DDERRNAPTLHKIFGESTSLLATYTLIAAGYACLARNTAILKDSAHPYVNQKERLCVLAL 125

Query: 151 ---THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              T N G+ G  GGQ LD+    +    +  + + KT  L   +   G I       + 
Sbjct: 126 ENATQNTGILGATGGQYLDLNPPNLSLKTLKEVIEKKTVTLFEISFVLGWIFGGGVLEKL 185

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             ++    + G+ FQ+ADDL D ++D
Sbjct: 186 SLVKKCAGHFGMAFQIADDLGDMKQD 211


>gi|283852797|ref|ZP_06370060.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B]
 gi|283571789|gb|EFC19786.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B]
          Length = 322

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 15/191 (7%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +R+ LL GGK++R  L    A  F  +      +  ++E +H  +L+HDD+  +D   +R
Sbjct: 34  VRHVLLAGGKRLRPLLTVLVARAFGHDKDDVYPLACSLEFLHSATLLHDDI--VDGAPLR 91

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+ + H+++     I+AG+ LL  A  I++         I S+ +L             
Sbjct: 92  RGRESAHVRFGATHTILAGDVLLALANRIVAEYDVPELTRILSEALLQTA---------T 142

Query: 162 GQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           G++L+I   +D  +       I   KT  L+  AC  GAI+A A     +     G N G
Sbjct: 143 GEILEIAHLRDTDLPLETYLSIITGKTAYLLQAACHCGAILAGADARLCQAAMSLGVNCG 202

Query: 219 IIFQLADDLLD 229
           I FQL DD LD
Sbjct: 203 IAFQLVDDALD 213


>gi|319941776|ref|ZP_08016098.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804709|gb|EFW01576.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 332

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   +            +GA IE +H  +L+HDD+  +D   +RRG+PT +
Sbjct: 54  GGKRMRPALLILISRALGYKGDLCCYLGATIELLHTATLMHDDV--VDESNLRRGRPTAN 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L T +F+++         N+R    L+   N   +G +  QM++  
Sbjct: 112 ARWGNGAAVLVGDFLYTRSFQMMVRAG-----NLRVMQALADAANRLSEGEVV-QMVNAH 165

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+ F + + KT  L        A +A  S+ ++E +  +   LG  FQ+ADD+L
Sbjct: 166 DPSVDETRYFRVIERKTACLFEAGARMAAAIAECSKEQEEAVAQYALALGNAFQIADDIL 225

Query: 229 D 229
           D
Sbjct: 226 D 226


>gi|240850066|ref|YP_002971459.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup]
 gi|240267189|gb|ACS50777.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup]
          Length = 358

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 77  GGKRLRPMITLASAHMFGYQSDGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTAR 134

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +     I +  +L+    I  +G +  Q+   +
Sbjct: 135 MIWGNQASVLVGDFLLGQAFKMMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAAK 188

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +     +    I   KT AL   A E G I+A     E+  LR +G +LG+ FQL DD L
Sbjct: 189 NIKTSPSDYLKIINAKTAALFSAAAEVGPIVAGYGHKERSSLREYGTSLGLAFQLIDDAL 248

Query: 229 D 229
           D
Sbjct: 249 D 249


>gi|319408199|emb|CBI81852.1| octaprenyl-diphosphate synthase [Bartonella schoenbuchensis R1]
          Length = 338

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +++  AIE +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMITLAAADMFGYQGDGHIKLATAIEFMHTATLLHDDV--VDESNLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLD 166
           + +    +++ G+ LL  AF++I         ++ S   L++  N       G   Q+  
Sbjct: 115 MIWGNKASVLVGDFLLGQAFKMIV--------DVGSMEALTILANAAAIIAEGEVMQLAA 166

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            Q+     +    I   KT AL   A E G I+A     E+  LR +G +LG+ FQL DD
Sbjct: 167 AQNIETTASDYLKIINAKTAALFSAAAEVGPIIAGYGHEERLALREYGTSLGLAFQLVDD 226

Query: 227 LLD 229
            LD
Sbjct: 227 ALD 229


>gi|302038674|ref|YP_003798996.1| polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii]
 gi|300606738|emb|CBK43071.1| Polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii]
          Length = 334

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V   A L          +G+ +E IH  +L+HDD+  +D   +RRG+ T  
Sbjct: 53  GGKRVRPLFVLLSAHLCGYAGQDHQALGSLVEFIHTATLLHDDV--VDEADLRRGRRTAS 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +I+ G+ L + A   I   + Q  +   S+    +     LQ    G  L   
Sbjct: 111 KVWGNQISILVGDYLYSRAICQIVDFRNQGINEALSEACRKMAEGEVLQLYYNGNPL--- 167

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              + E++   I + KT  L+  +C+ GAI+  A++  +E L  FG+ LGI FQLADD L
Sbjct: 168 ---MPESEYLRIIEHKTAGLIAASCKIGAIVGGATEELQEALFRFGQRLGIAFQLADDTL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|271966484|ref|YP_003340680.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM
           43021]
 gi|270509659|gb|ACZ87937.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM
           43021]
          Length = 322

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 27/216 (12%)

Query: 29  SHMQTQHNDRLL-----------SAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
           S   +Q  DRLL           + +R    G GK +R  L+   A     +H   +R+G
Sbjct: 15  SDFTSQVTDRLLRLADGLPEPVRAPVRTLAAGPGKFVRPRLLAAGAGFGTADHDRLVRLG 74

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A +E IH  SL+HDD+  +D    RRG P  H       A++AG       F ++ +   
Sbjct: 75  ALVELIHLASLLHDDV--IDEAETRRGAPAAHTAVGTEQAMLAG----LACFALVGTEAA 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC 193
            L + +   + +++        +  G++LD++  F           + + KT  L    C
Sbjct: 129 DLGEGVAGAVSMAVAK------LAYGELLDVERAFDTAFPLPAYLELVQSKTAELFRLCC 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             GA  A +   E + L  FG  LG+ FQ+ DD LD
Sbjct: 183 LLGAAEARSGHGEADALVRFGTALGVTFQILDDCLD 218


>gi|241203314|ref|YP_002974410.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857204|gb|ACS54871.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 338

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 175 DDYLS------VIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|169632597|ref|YP_001706333.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter baumannii
           SDF]
 gi|169794921|ref|YP_001712714.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter baumannii
           AYE]
 gi|184159304|ref|YP_001847643.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           ACICU]
 gi|213157674|ref|YP_002320472.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057]
 gi|215482467|ref|YP_002324653.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294]
 gi|239502311|ref|ZP_04661621.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB900]
 gi|260557286|ref|ZP_05829502.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606]
 gi|301344906|ref|ZP_07225647.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB056]
 gi|301511077|ref|ZP_07236314.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB058]
 gi|301595152|ref|ZP_07240160.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB059]
 gi|332854208|ref|ZP_08435228.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6013150]
 gi|332866350|ref|ZP_08436955.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6013113]
 gi|332872565|ref|ZP_08440534.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6014059]
 gi|169147848|emb|CAM85711.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter baumannii
           AYE]
 gi|169151389|emb|CAP00114.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter baumannii]
 gi|183210898|gb|ACC58296.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           ACICU]
 gi|213056834|gb|ACJ41736.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057]
 gi|213986828|gb|ACJ57127.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294]
 gi|260409392|gb|EEX02694.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606]
 gi|322509215|gb|ADX04669.1| ispB [Acinetobacter baumannii 1656-2]
 gi|323519244|gb|ADX93625.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332728133|gb|EGJ59521.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6013150]
 gi|332734698|gb|EGJ65802.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6013113]
 gi|332739251|gb|EGJ70109.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6014059]
          Length = 325

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A    ++++  A R+ A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAARACGLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +  ++  TA++ G+ L+  AF+++   +  T LKD            + G   +  G++L
Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152

Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +Q +      +ET + +I   KT  L   A E  AI+A   +  +E LR F  + G  F
Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 211 QIIDDILDYTSD 222


>gi|32267223|ref|NP_861255.1| hypothetical protein HH1724 [Helicobacter hepaticus ATCC 51449]
 gi|32263276|gb|AAP78321.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 303

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 24/188 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +RS L+    S+ ++N   ALRV A IE I   SL+HDD+  +D    RRG P+++ 
Sbjct: 36  GKMLRSKLLL---SISDMNE-DALRVCALIEMIQSASLLHDDV--IDESLTRRGIPSINA 89

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQMLDIQ 168
            +    AI+ G+ L + AF  +S    +L  ++ S ++ LS+           G++ D++
Sbjct: 90  TFGNKNAIMLGDVLYSKAFYELSCLDVRLAQSVSSAVVRLSV-----------GEIEDVK 138

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ +   +   KT AL+  A E GAI+   ++N     R +GENLGI FQ+ D
Sbjct: 139 LSLSFHTDKERYIRMCADKTAALIVAAAECGAILKGLNKN---IYRIYGENLGIAFQIID 195

Query: 226 DLLDCEED 233
           D+LD  +D
Sbjct: 196 DILDITQD 203


>gi|171184649|ref|YP_001793568.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170933861|gb|ACB39122.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 334

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 32/207 (15%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +     A+   A +E IH YSLI+DD+  +D G +RRG PTV 
Sbjct: 42  GGKRLRPLLTLATAEAVSGRWEPAVPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVR 99

Query: 109 IQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQML 165
             + +  AI+ G        E ++ +PK            L+    +   ++ +  G+ L
Sbjct: 100 KAFGDNAAILIGIWYREAIEEAVLDTPKP-----------LAFAKEVAKVIKAIDEGERL 148

Query: 166 DIQDEFIDETQVFMIQ---------------KMKTGALMCFACESGAIMAHASQNEKERL 210
           DI  E+      + I+                +KTGAL+  A + GA+         E  
Sbjct: 149 DILFEYAGREDPYFIKARKAEVTLEDYIHMVSLKTGALIAAAAKWGAMSVSDDGKLAEEA 208

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPKK 237
             FG   G+ FQ+ DD+LD   D PKK
Sbjct: 209 WNFGLKAGVAFQIIDDVLDIYGD-PKK 234


>gi|124265703|ref|YP_001019707.1| dimethylallyltransferase [Methylibium petroleiphilum PM1]
 gi|124258478|gb|ABM93472.1| Dimethylallyltransferase [Methylibium petroleiphilum PM1]
          Length = 330

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPMLVLLFAQALGFRGPERFELAATVEFIHTATLLHDDV--VDESALRRGRDTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ L + AF+++ S      + +R   +L+   N+  +G +  Q++++ 
Sbjct: 109 ARFGNAASVLVGDFLYSRAFQMMVS-----VNRMRVLEVLADATNVIAEGEVL-QLMNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +       + + KT  L   +   GA++A AS   +     +G  LG  FQL DDLL
Sbjct: 163 DPDLSIDDYLRVIRFKTAKLFEASARLGAMLADASPGVETACADYGRALGTAFQLVDDLL 222

Query: 229 DCE 231
           D E
Sbjct: 223 DYE 225


>gi|148544308|ref|YP_001271678.1| polyprenyl synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153686|ref|YP_001842027.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112]
 gi|227365030|ref|ZP_03849068.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3]
 gi|325681657|ref|ZP_08161177.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A]
 gi|148531342|gb|ABQ83341.1| Polyprenyl synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225030|dbj|BAG25547.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112]
 gi|227069942|gb|EEI08327.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3]
 gi|324978969|gb|EGC15916.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A]
          Length = 326

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 28/197 (14%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK +R       A   N+NH TA      +++ +++E +H  +LIHDD+  +D+   RR
Sbjct: 45  GGKYLRPAFFLLFA---NINHQTADEQEKLIKIASSLEVLHMATLIHDDI--IDDSPKRR 99

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGM 159
           G  +V   + + TA+  G+ L T  F+++    T    L  N R+           ++ +
Sbjct: 100 GAVSVQAAFGKDTAVYTGDFLFTIFFDLLVETMTGSAYLTRNART-----------MRKI 148

Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++  + + F +D++ +   + +  KT A+   A E GA   HA        +  G+N
Sbjct: 149 LTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYFGHADHRTINLAKRIGQN 208

Query: 217 LGIIFQLADDLLDCEED 233
           +GI FQ+ DD+LD   D
Sbjct: 209 IGISFQILDDILDYSGD 225


>gi|307824936|ref|ZP_07655158.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
 gi|307733983|gb|EFO04838.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
          Length = 336

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A      +   L + A IE IH  +L+HDD+  +D+  +RRGK + +
Sbjct: 57  GGKRLRPMLLLLAAKALGGANDNHLLMAAVIEFIHTATLLHDDV--VDDSDLRRGKESAN 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +I+ G+ L + AFE++         N+R   +LS T     +G +  Q+L+  
Sbjct: 115 AVWGNAASILVGDYLYSSAFEMMVRTG-----NMRVMEILSKTTTAIAEGEVL-QLLNCN 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   +   KT  L   A +  A++A AS   ++ L  +G++LGI FQL DD L
Sbjct: 169 NPETTEQKYLEVIARKTAILFSAATKLAAVIAGASTETEQGLSLYGQHLGIAFQLIDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|291303388|ref|YP_003514666.1| trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM
           44728]
 gi|290572608|gb|ADD45573.1| Trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM
           44728]
          Length = 322

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 32/232 (13%)

Query: 8   KLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           +L+   KR+  ++D     L + ASH        +L A      GGK+ R  L    A  
Sbjct: 15  RLEVIEKRLQEVIDSGDAFLTEAASH--------VLKA------GGKRFRPMLSVTAAHF 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            + +    +     +E  H  +L HDD+  MD   +RRG P+ + ++    AI++G+ L 
Sbjct: 61  GDPDAHGVIESSLVMELTHLATLYHDDV--MDEAAMRRGAPSANSRWSNSIAILSGDYLF 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM-IQ 181
             A E+++   ++    +R Q             ++ GQ+ +     E +D    ++ + 
Sbjct: 119 AVASELVAELGSE---TVREQART-------FSRLVHGQIAETVGPPEGVDPVDWYLRVL 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             KTG+L+  A   GA  A A  +  + +  +GE +G+ FQL+DDLLD   D
Sbjct: 169 TDKTGSLIATAARLGAQFAGAPTSVVDAVAEYGETIGVAFQLSDDLLDIASD 220


>gi|295663240|ref|XP_002792173.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
           brasiliensis Pb01]
 gi|226279348|gb|EEH34914.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
           brasiliensis Pb01]
          Length = 533

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 275 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALA- 331

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQV-FMIQK--MKTGA 187
              +L+D    +L+ ++  N+ ++G    L    LD ++ F  E  + + +QK  +K+ +
Sbjct: 332 ---RLRDPEVIELVATVIANL-IEGEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSAS 387

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 388 LISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLD 429


>gi|95929474|ref|ZP_01312217.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM
           684]
 gi|95134590|gb|EAT16246.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM
           684]
          Length = 322

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 20/187 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  CA L      + + V + +E IH  +L+HDD+  +D+  +RRG  + +
Sbjct: 41  GGKRMRPMLVLLCARLAAYQGESHIGVASVVEFIHTATLLHDDV--VDSADLRRGAASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS------QLMLSLTHNIGLQGMLGG 162
             +    +++ G+ L + +F I+          +R+      Q +   T N+    +L  
Sbjct: 99  NVWGNEASVLVGDFLFSKSFSIM----------VRTGSLPILQALSDATTNMAEGEVL-- 146

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q++   D  + E +   + + KT  L+  AC  G I+   S  +++ L+ FG  LGI FQ
Sbjct: 147 QLISTCDLDLSEERYMQVVRDKTAVLIAAACRCGGILGGVSAEQEQALQEFGMELGIAFQ 206

Query: 223 LADDLLD 229
             DD LD
Sbjct: 207 FMDDALD 213


>gi|78042835|ref|YP_360049.1| heptaprenyl diphosphate synthase component II [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994950|gb|ABB13849.1| heptaprenyl diphosphate synthase component II [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 326

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R       A L + +      +  A+E IH  +L+HDD+  +DN  +RRG PTV 
Sbjct: 48  GGKRLRPAFALLAAKLGDYDFEKVKPLAVALELIHMATLVHDDV--VDNSMLRRGLPTVK 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +I  G+ +   +  +I S K      + +++ + +T    +Q + G +  +I 
Sbjct: 106 ANWGNKMSIHIGDRIFAKSLLLIDSCKNNYVAKVLAEVSVKMTTG-EIQQLNGAK--NIS 162

Query: 169 DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               D    ++I+ K KT  L+  +CE G +MA+ S      L+ +G  +G+ FQ+ DD+
Sbjct: 163 TSIKD----YLIKIKRKTALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDI 218

Query: 228 LDCEED 233
           LD   D
Sbjct: 219 LDFTAD 224


>gi|189502166|ref|YP_001957883.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497607|gb|ACE06154.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 324

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 15/184 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK++R  LV   AS+   +     R GAA +  +H  SLIHDD+  +D    RR K TV+
Sbjct: 43  GKQLRPQLVLIVASVLGNDITEKTRRGAALVSLLHHASLIHDDV--VDEATYRRHKETVN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
            ++    A++ G+ +L  + +I  + + Q  D +    ML++T     Q M  G++L + 
Sbjct: 101 ARWGNKLAVLFGDYVLANSLQI--AIENQDYDFLP---MLTIT----TQTMSEGEILQLK 151

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             Q+    E     I + KT +L+  +C  GA+   ASQ + E +   GE +G+ FQL+D
Sbjct: 152 QAQEIMASEATYLEIIQKKTASLLAASCAMGAMSVSASQEQIEIMYAIGEQIGMAFQLSD 211

Query: 226 DLLD 229
           DL+D
Sbjct: 212 DLID 215


>gi|299768956|ref|YP_003730982.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1]
 gi|298699044|gb|ADI89609.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1]
          Length = 325

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A    ++++  A R+ A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAARACGLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +  ++  TA++ G+ L+  AF+++   +  T LKD            + G   +  G++L
Sbjct: 104 NATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGEVL 152

Query: 166 DIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +Q +      +ET + +I   KT  L   A E  AI+A   +  +E LR F  + G  F
Sbjct: 153 QLQSQHQPDTTEETYLKIIHG-KTSRLFELATEGAAILA-GQEAYREPLRLFAGHFGNAF 210

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 211 QIIDDILDYTSD 222


>gi|229096105|ref|ZP_04227078.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-29]
 gi|229115061|ref|ZP_04244471.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock1-3]
 gi|228668201|gb|EEL23633.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock1-3]
 gi|228687065|gb|EEL40970.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-29]
          Length = 320

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E +++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECVTNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDMVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|209964973|ref|YP_002297888.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum
           SW]
 gi|209958439|gb|ACI99075.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum
           SW]
          Length = 340

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L          + A +E +H  +L+HDD+  +D   +RRG+ + +
Sbjct: 59  GGKRLRPVLTLAAAQLCGYQGTRQTALAACVEFLHTATLLHDDV--VDESDLRRGQASAN 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L   AF+I+    +   D +R  ++ + +  I    +L  Q+    
Sbjct: 117 AVFGNKASVLVGDFLFARAFQIMVEDGSL--DVLR--ILCTASAVIAEGEVL--QLTTTN 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + K KT  L   ACE G I+A     E+  LR +G NLGI FQL DD+L
Sbjct: 171 DTDTTEEAYLEVIKAKTAELFAAACELGGIVADRPAVEQAALRSYGMNLGIAFQLVDDVL 230

Query: 229 D 229
           D
Sbjct: 231 D 231


>gi|300783442|ref|YP_003763733.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32]
 gi|299792956|gb|ADJ43331.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32]
          Length = 339

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 18/188 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  LV  CA         A+    A+E +H +SL+HDD+  MD    RR + T  
Sbjct: 61  GGKALRPALVLLCAEAAGGEAADAVPAAVAVELVHNFSLLHDDV--MDGDTTRRHRATAW 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             +    A++AG+ LL+ AFE++ +P       + S   L+L         L GQ  D+ 
Sbjct: 119 TVFGTGPAVLAGDALLSLAFEVL-APSGAANAKVLSAATLAL---------LEGQAADLD 168

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             Q + +   +   + + KT AL+  AC  GA    A  +   R   FG  +G+ FQ  D
Sbjct: 169 FEQRDDVTPGECIRMAEGKTAALLGAACTLGATSGPAGAD---RFGAFGRAVGLAFQHVD 225

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 226 DLLGIWGD 233


>gi|49475216|ref|YP_033257.1| octaprenyl-diphosphate synthase [Bartonella henselae str.
           Houston-1]
 gi|49238021|emb|CAF27227.1| Octaprenyl-diphosphate synthase [Bartonella henselae str.
           Houston-1]
          Length = 356

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F   +   +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 75  GGKRLRPMLTLASARMFGYQNDGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTAR 132

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +I+ G+ LL  AF+++         ++ S   LS+  N     +  G+++ + 
Sbjct: 133 MIWGNQASILVGDFLLGQAFKMMV--------DVGSIEALSVLANAAAI-IAEGEVMQLS 183

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                ET +     I   KT AL   A E G I+A     E+  LR +G  LG+ FQL D
Sbjct: 184 ATKNIETSISDYLKIINAKTAALFSAAAEVGPIIAGYGHEERLALREYGTFLGLAFQLID 243

Query: 226 DLLD 229
           D LD
Sbjct: 244 DALD 247


>gi|312214262|emb|CBX94255.1| hypothetical protein [Leptosphaeria maculans]
          Length = 941

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/166 (28%), Positives = 92/166 (55%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RR  P+ +I++    A++AG+ LL  A    S 
Sbjct: 199 RLAEITELIHTASLLHDDV--IDHSVSRRSAPSANIEFGNKMAVLAGDFLLGRA----SV 252

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L+D   ++L+ ++  N     ++ G+ + +++        ++ +ET  + +QK  +
Sbjct: 253 ALARLRDPEVTELLATVIAN-----LVEGEFMQLKNTARDETNPQWTEETVSYYLQKTYL 307

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K+ +L+  +C + AI+  +S +  E    +G+NLG+ FQL DD+LD
Sbjct: 308 KSASLISKSCRAAAILGGSSDDVVEASYLYGKNLGLAFQLVDDMLD 353


>gi|209548129|ref|YP_002280046.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533885|gb|ACI53820.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 338

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACIIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 175 DDYLS------VIRAKTAALFAAAAEVGPIVAEAGKSGRNALKSYGMNLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|255066032|ref|ZP_05317887.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256]
 gi|255049577|gb|EET45041.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256]
          Length = 324

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 113/221 (51%), Gaps = 15/221 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L E+  R++ +++  + Q+   + +Q    ++SA      GGK++R  +    A     +
Sbjct: 12  LPEDLSRVNEVINQAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAAKSVGYD 64

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L T AF
Sbjct: 65  GDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLYTRAF 122

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + KT  L
Sbjct: 123 QLMVDSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEAQYVQVIQYKTAKL 176

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              A + GAI+ +A+   ++ L+ +G  +G  FQ+ DD+LD
Sbjct: 177 FEAAAQVGAILGNAAPEHEQALKDYGMYVGTAFQIIDDVLD 217


>gi|332289056|ref|YP_004419908.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179]
 gi|330431952|gb|AEC17011.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179]
          Length = 323

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 10/207 (4%)

Query: 32  QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           Q Q +  L++ + + ++  GGK+IR  +    A+  N      +     IE IH  +L+H
Sbjct: 24  QLQSDVALINQLSFYIINGGGKRIRPLIAVLVANALNYQGDRHITCATFIEFIHTATLLH 83

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRGK T +  +    +++ G+ + T AF++++    +L      Q+M  
Sbjct: 84  DDV--VDESTLRRGKDTANAIFGNAASVLVGDFIYTRAFQLMA----RLGSLPVMQVMSD 137

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             + I    +L  Q+++  D    E     +   KT  L   A E  A+++ A++ + + 
Sbjct: 138 AVNVIAAGEVL--QLMNCNDPDTTEQSYMQVIYSKTARLFEVAAECSALLSEATEQQVQA 195

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++ +G  LG  FQL DD+LD   D+ K
Sbjct: 196 MKLYGRYLGTAFQLIDDVLDYCADVDK 222


>gi|191639107|ref|YP_001988273.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23]
 gi|239630025|ref|ZP_04673056.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|301067168|ref|YP_003789191.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
 gi|190713409|emb|CAQ67415.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23]
 gi|239527637|gb|EEQ66638.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|300439575|gb|ADK19341.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
 gi|327383175|gb|AEA54651.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei LC2W]
 gi|327386359|gb|AEA57833.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei BD-II]
          Length = 322

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L+   A L N ++   +  GAAIE +H  +L+HDD+  +D+  +RRG  TV 
Sbjct: 45  GGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVS 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +     AI AG+ L    F+++S      T L  N R  +M  +      Q      ++
Sbjct: 103 AKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNAR--VMKHIFMGEVDQNGPSAPLI 160

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E++           KT AL   A  +GA +      EK+    FG  LG+ FQ+ D
Sbjct: 161 PSVSEYLKAI------AGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMID 214

Query: 226 DLLDCEE 232
           DLLD  +
Sbjct: 215 DLLDYTQ 221


>gi|116495626|ref|YP_807360.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
 gi|116105776|gb|ABJ70918.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
          Length = 322

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L+   A L N ++   +  GAAIE +H  +L+HDD+  +D+  +RRG  TV 
Sbjct: 45  GGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVS 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +     AI AG+ L    F+++S      T L  N R  +M  +      Q      ++
Sbjct: 103 AKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNAR--VMKHIFMGEVDQNGPSAPLI 160

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E++           KT AL   A  +GA +      EK+    FG  LG+ FQ+ D
Sbjct: 161 PSVSEYLKAI------AGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMID 214

Query: 226 DLLDCEE 232
           DLLD  +
Sbjct: 215 DLLDYTQ 221


>gi|258676437|gb|ACV87215.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676439|gb|ACV87216.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676441|gb|ACV87217.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676443|gb|ACV87218.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676445|gb|ACV87219.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|322816245|gb|EFZ24624.1| farnesyl synthetase, putative [Trypanosoma cruzi]
          Length = 363

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+G   E +H  +L+HDD+  MDN   RRG+PTVH  YD   A++AG+ LL  A   I+
Sbjct: 114 LRLGEITELLHTATLVHDDV--MDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIA 171

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +       N R  L++S      L+ +  G+M+ + D   D          KT +L+  +
Sbjct: 172 A-----LGNSRVVLLMS----TALEDLAAGEMMQM-DGCFDIESYEQKSYCKTASLIANS 221

Query: 193 CESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
             S A++A       E     FG++LGI FQ+ DD LD   D
Sbjct: 222 LASTAVLAGLPNTAYEEAAAKFGKHLGIAFQIVDDCLDITGD 263


>gi|309378666|emb|CBX22737.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 324

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          ++     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGRSVGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|304407206|ref|ZP_07388859.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343647|gb|EFM09488.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 794

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 7/199 (3%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L+ A  Y+L GG K++R  L        + +   + + +  ++E +H  SLI DDLPS D
Sbjct: 534 LIDAANYSLTGGGKRLRPILTWVMGVQQYGMRPESLVPLLRSLEYMHTASLIFDDLPSQD 593

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG+ T+H  +D  TA + G  L+  A +  +S     + + RS L L    +   
Sbjct: 594 NAPTRRGRATLHEVHDSATAELTGLLLIQRATQEQAS---LAQFDPRSVLALIRYSSQKA 650

Query: 157 QGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           + +  GQ +D+  + + +   Q+  I   KTG     A    AI+A A + E   L+ F 
Sbjct: 651 EDLCAGQAMDLNAKGKPLTLEQLNAICFYKTGIAFEAALVMPAILAQAPEQEIGLLKSFA 710

Query: 215 ENLGIIFQLADDLLDCEED 233
            + GI FQ+ DDLLD E D
Sbjct: 711 YHAGIAFQIKDDLLDVEGD 729


>gi|225685204|gb|EEH23488.1| prenyl transferase [Paracoccidioides brasiliensis Pb03]
          Length = 450

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 242 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALA- 298

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQV-FMIQK--MKTGA 187
              +L+D    +L+ ++  N+ ++G    L    LD ++ F  E  + + +QK  +K+ +
Sbjct: 299 ---RLRDPEVIELVATVIANL-IEGEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSAS 354

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 355 LISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLD 396


>gi|227533817|ref|ZP_03963866.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227188547|gb|EEI68614.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 312

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L+   A L N ++   +  GAAIE +H  +L+HDD+  +D+  +RRG  TV 
Sbjct: 35  GGKMLRSGLMLMLARLGNPDNDDLITAGAAIEALHLATLVHDDV--LDHADLRRGSDTVS 92

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +     AI AG+ L    F+++S      T L  N R  +M  +      Q      ++
Sbjct: 93  AKSGNREAIYAGDFLFAIYFQLLSEQNPATTDLATNAR--VMKHIFMGEVDQNGPSAPLI 150

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E++           KT AL   A  +GA +      EK+    FG  LG+ FQ+ D
Sbjct: 151 PSVSEYLKAI------AGKTAALFALATYTGATIGQLDFTEKKAAYRFGRQLGMAFQMID 204

Query: 226 DLLDCEE 232
           DLLD  +
Sbjct: 205 DLLDYTQ 211


>gi|86356521|ref|YP_468413.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42]
 gi|86280623|gb|ABC89686.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42]
          Length = 346

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 65  GGKRLRPMLTLAAASLFDYRGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 123 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 182

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 183 DDYLS------VIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 236

Query: 229 D 229
           D
Sbjct: 237 D 237


>gi|32491227|ref|NP_871481.1| hypothetical protein WGLp478 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166434|dbj|BAC24624.1| ispB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 323

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 18/193 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IR   +   A     N    + + + IE IH  +L+HDD+  +D+   RRG  +V+
Sbjct: 43  NGKFIRPIAIILAAKSLFYNKKKHIILASLIELIHMSTLLHDDI--IDDAKKRRGNASVN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +  +  I+ G+ + T AF++IS         +RS  +  +  N  +  ++ G++L  Q
Sbjct: 101 VVFGNIPTILIGDFIYTRAFQMISK--------LRSFKIFKIISN-AVNMIVEGEIL--Q 149

Query: 169 DEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             + +   + +   M     KT  L   + +S AI++ +S  E++  + +G  LGI FQ+
Sbjct: 150 LTYCNSVDITIKNYMQIIYKKTAKLFEVSLQSAAILSKSSYKEEQAFKNYGRYLGISFQI 209

Query: 224 ADDLLDCEEDLPK 236
            DD LD + D  K
Sbjct: 210 IDDFLDYKSDFKK 222


>gi|301064156|ref|ZP_07204603.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium
           NaphS2]
 gi|300441776|gb|EFK06094.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium
           NaphS2]
          Length = 325

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 15/189 (7%)

Query: 45  YALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           YALLG GK++R  +      L          +    E IH  SL+HDD+  +DN  IRR 
Sbjct: 39  YALLGEGKRLRPLIFVLSCQLCGYGGEDLYPLSTVFEYIHTSSLLHDDV--LDNAEIRRR 96

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           KP+ +  +    A++ G+ L + A  I  S  +          + SLT       M  GQ
Sbjct: 97  KPSSNQIWGNQAAVLEGDFLFSKALSIAVSANS-------VPFISSLTK--ATMRMSEGQ 147

Query: 164 MLDI--QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +L++   D+       +M I   KT  L+  AC  GAI++ +S   +  L  FG ++GI 
Sbjct: 148 ILELVHTDDLETGRDTYMQIINAKTAVLISAACGCGAIVSGSSPEIEASLTRFGRSVGIA 207

Query: 221 FQLADDLLD 229
           FQL DDLLD
Sbjct: 208 FQLVDDLLD 216


>gi|304386506|ref|ZP_07368794.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091]
 gi|304339335|gb|EFM05407.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091]
          Length = 324

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVDSGS-----MRVLEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|259502679|ref|ZP_05745581.1| polyprenyl synthetase [Lactobacillus antri DSM 16041]
 gi|259169324|gb|EEW53819.1| polyprenyl synthetase [Lactobacillus antri DSM 16041]
          Length = 288

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 18/188 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R  L+   + +F  +       +++ A+IE +H  +LIHDD+  +D+   RRG  
Sbjct: 5   GGKYLRPALLLLVSRMFTTDSQDDERLVKLAASIEVLHMATLIHDDI--IDDSPERRGAV 62

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-- 161
           ++  ++ + TA+ AG+ L T  F+++  + P +     + +Q M  +     L G LG  
Sbjct: 63  SIQARFGKDTAVYAGDLLFTIFFDLLLEAIPSSAYL-RVNAQAMRQI-----LDGELGQM 116

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           GQ  ++Q    D        K KT AL   A + GA  A  + ++      FG+ LGI F
Sbjct: 117 GQRFNLQQTLAD---YLANVKGKTAALFKLAAQEGAHFAGGTADQVASAAAFGQQLGIAF 173

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 174 QMLDDILD 181


>gi|83648584|ref|YP_437019.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
           2396]
 gi|83636627|gb|ABC32594.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
           2396]
          Length = 322

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 8/183 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   ++  N      L++ A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLVSNALNATEKHYLKLAAIIEFLHTATLLHDDV--VDTSDLRRGRDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ L + AF+++     +L+D     ++ + T+ I    +L  Q+ + +
Sbjct: 101 AKWGNAPSVLVGDFLYSRAFQMM----VELRDMDVMSVLANATNVIAEGEVL--QLTNCK 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   +   KT  L   A  S AI+  AS      ++ FG  LGI FQL DD+L
Sbjct: 155 NPDITEAQYMEVITAKTAMLFEAASHSAAILCQASAETTSDMKEFGLELGIAFQLIDDVL 214

Query: 229 DCE 231
           D +
Sbjct: 215 DYQ 217


>gi|294669816|ref|ZP_06734875.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308209|gb|EFE49452.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 122

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL      + Q    L   +RYA L GGK++R  LV   + L            AAIE
Sbjct: 18  ELLLARLMPSENQLPQSLHETMRYAALDGGKRLRPLLVLAASELGEAVPDAVEAAMAAIE 77

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
            IH YSL+HDD+P+MDN  +RRG+PT HI+Y E
Sbjct: 78  LIHVYSLVHDDMPAMDNDSLRRGRPTCHIRYGE 110


>gi|311772001|pdb|3AQB|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
           Synthase In Complex With Magnesium
 gi|311772003|pdb|3AQB|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
           Synthase In Complex With Magnesium
 gi|311772005|pdb|3AQC|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
           Synthase In Complex With Magnesium And Fpp Analogue
 gi|311772007|pdb|3AQC|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
           Synthase In Complex With Magnesium And Fpp Analogue
 gi|2982681|dbj|BAA25268.1| component B of hexaprenyl diphosphate synthase [Micrococcus luteus]
          Length = 325

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V     L +      +R   ++E +H  SL+HDD   +DN  +RRG  +VH
Sbjct: 43  GGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLELVHMASLVHDDY--IDNSDMRRGNTSVH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +D+ TAI  G+ LL  A + I++        I S+ +L +           G+   + 
Sbjct: 101 IAFDKDTAIRTGHFLLARALQNIATINNSKFHQIFSKTILEVCF---------GEFDQMA 151

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D F   +  T        KT  L+  +C  GA+ +   +     ++ FG  +G+ +Q+ D
Sbjct: 152 DRFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIID 211

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 212 DILDYTSD 219


>gi|217974480|ref|YP_002359231.1| polyprenyl synthetase [Shewanella baltica OS223]
 gi|217499615|gb|ACK47808.1| Polyprenyl synthetase [Shewanella baltica OS223]
          Length = 331

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L D+++   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMKVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATLEQETALGNYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|315498623|ref|YP_004087427.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48]
 gi|315416635|gb|ADU13276.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48]
          Length = 343

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +    +L   ++ AA+E IH  +L+HDD+  +D+  +RRGK   H
Sbjct: 63  GGKRLRPLLCVAAARVAGTTNLHHRKLSAAVEFIHTATLLHDDV--VDSSQLRRGKVAAH 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +   ++++ G+ L   AFE++        D++++  +LS    +  +G +  Q++   
Sbjct: 121 LIWGAPSSVLVGDFLFARAFELMVE-----TDSLQALGILSKASGVIAEGEVL-QLMKAY 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E     I   KT  L   A ESGA+ A AS   ++ LR +G NLG+ FQ+ DD L
Sbjct: 175 DVNLTEATYIDIIAAKTAVLFAAAAESGAVAAGASSAGQQALRDYGLNLGLAFQIQDDAL 234

Query: 229 D 229
           D
Sbjct: 235 D 235


>gi|73748232|ref|YP_307471.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
           CBDB1]
 gi|73659948|emb|CAI82555.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
           CBDB1]
          Length = 326

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 14/188 (7%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y L+GGK +RS L    A  F       L +  + E +H  +L+HDD  ++D    RRG+
Sbjct: 44  YILVGGKVLRSALSMLSAMCFGAGIKKVLPLATSSEMLHIATLVHDD--AIDKADTRRGR 101

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            TV+  +    AI+ G+ L        ++       N+    + S T    LQ +  G++
Sbjct: 102 RTVNAVWGLEKAILLGDFLFA-----HAAETAAETGNMGIVTLFSQT----LQIIASGEL 152

Query: 165 LDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                 F  D++    ++++  KT AL   A + GAI+A AS +++E +R +G NLG+ F
Sbjct: 153 KQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILADASSSDEEIMRSYGYNLGLSF 212

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 213 QIVDDILD 220


>gi|162147610|ref|YP_001602071.1| octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542242|ref|YP_002274471.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786187|emb|CAP55769.1| putative octaprenyl-diphosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529919|gb|ACI49856.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 358

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 12/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  L    A L +      H   + + A +E IH  +L+HDD+  +D   +RRG 
Sbjct: 73  GGKRLRPLLTLAAARLCDYPAGPEHQRHVSLAACVEFIHTATLLHDDV--VDESLLRRGL 130

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            + +  +    +++ G+ L   +F++++        +++   +LS       +G +  QM
Sbjct: 131 ASANAVFGNKASVLVGDFLFARSFQLMTD-----DGSLKVMAILSSASATIAEGEVL-QM 184

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D      Q   +   KT AL   AC  GA++A   + E+  L  FG NLG+ FQL 
Sbjct: 185 STQNDLSTSVEQYLEVIHGKTAALFAAACRVGAVVAERPEAEELALESFGTNLGMAFQLV 244

Query: 225 DDLLDCEED 233
           DD LD   D
Sbjct: 245 DDALDYAAD 253


>gi|255018351|ref|ZP_05290477.1| hypothetical protein LmonF_12731 [Listeria monocytogenes FSL
           F2-515]
          Length = 183

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 11/126 (8%)

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQDE-- 170
           ++AG+ LLT AF I++       DN+  +  ++L + I    G +GM+GGQ+ D++ E  
Sbjct: 1   MLAGDALLTLAFSILAED-----DNLSFETRIALINQISFSSGAEGMVGGQLADMEAENK 55

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +   ++  I   KTG L+ +A  S A +A A   + +RLR F EN+GI FQ++DD+LD 
Sbjct: 56  HVTLEELSSIHARKTGELLIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDV 115

Query: 231 EEDLPK 236
             D  K
Sbjct: 116 IGDETK 121


>gi|212636824|ref|YP_002313349.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3]
 gi|212558308|gb|ACJ30762.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3]
          Length = 323

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   + N  + L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSILAARAIDYNGESHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+LK ++    +L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELK-SLEVLEILADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +S+  +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLAESSEEVQTALAEYGKFLGTAFQLTDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|83594282|ref|YP_428034.1| farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170]
 gi|83577196|gb|ABC23747.1| Farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170]
          Length = 360

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 13/192 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L         ++ A +E IH  +L+HDD+  +D   +RRG+ + +
Sbjct: 77  GGKRLRPLLTLASARLCGYEGERHAQLAACVEFIHTATLLHDDV--VDESLLRRGRDSAN 134

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + +FE++      ++D +   L +LS    +  +G +  Q++  
Sbjct: 135 ALWGNKASVLVGDFLFSRSFELM------VEDGVLKVLGILSHASRVIAEGEVA-QLITA 187

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E Q   + + KT  L   AC  GA++A   + E+E L  +G  LGI FQL DD 
Sbjct: 188 NDMATTEAQYLEVIRGKTAQLFAAACRIGAVVAERPEAEEEALDTYGMTLGIAFQLVDDY 247

Query: 228 LDC---EEDLPK 236
           LD    ++DL K
Sbjct: 248 LDYSARQQDLGK 259


>gi|332983459|ref|YP_004464900.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
 gi|332701137|gb|AEE98078.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
          Length = 323

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV      F       +    A E IH  SL+HDD+  M +   RR  PT++
Sbjct: 44  GGKRIRPRLVLLSGMCFGELDEKMIHAAVAAELIHTASLVHDDIIDMSD--YRRNNPTIN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQMLDI 167
                  A++AG+ L   AFEI+S            +L+ S+ + +  +Q M  G+++  
Sbjct: 102 SISGNHVAVLAGDFLFAKAFEILS----------EHELINSMLYFVNAIQNMCSGEIVQS 151

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              F   + E         KT +L+C  C +GA  A A  +E   +  FG  +G  FQ+ 
Sbjct: 152 YRRFDIRVTEQDYMDYIDKKTASLICACCMAGAQSAGAGSHEINLMGSFGYKIGRAFQIT 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|331697463|ref|YP_004333702.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190]
 gi|326952152|gb|AEA25849.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190]
          Length = 356

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A+         +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 71  GGKAVRPALALLSAAAAGAGVEVGVPGAVAVELVHNFSLLHDDL--MDGDTERRHRTTVW 128

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +Q+   +AI+ G+ +L  A E++   +        +  +L++T     + ++ GQ  D+ 
Sbjct: 129 VQWGASSAILCGDAMLALAQEVLL--EAPSPHAAPAARLLAVT----TRELIRGQAEDLA 182

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D+  V     +   KTG+L+  +   GA++A A   + E L  +G  +G+ FQL D
Sbjct: 183 FESRDDVGVDECLSMAAGKTGSLLAASASIGAVLAGAPAAQTEALHTYGHEVGMAFQLVD 242

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 243 DLLGIWGD 250


>gi|300857173|ref|YP_003782157.1| putative polyprenyl synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437288|gb|ADK17055.1| predicted polyprenyl synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 274

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 22/190 (11%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + GK++R  L    A   + + LT+      +++  ++E IH  SLIHDD+  +D   +R
Sbjct: 43  IPGKRLRPTLTFLSAGAIS-SELTSSAKHNLIQLSISLELIHSASLIHDDI--IDGDLLR 99

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RG+ T++  +    A++AG+ L + AF I S   P+        +Q+M  +T ++ +   
Sbjct: 100 RGQKTLNKTFGNKIAVLAGDALYSRAFTIFSDTLPRE------FAQVMGRVTESMSV--- 150

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              ++L+  +   D    F I   KT + M   C  G  +A+A   E   L  +GENLG+
Sbjct: 151 --AEILNANNPSPDRETYFKIILGKTASFMSACCRLGGSIAYAPYEESNMLSKYGENLGM 208

Query: 220 IFQLADDLLD 229
            +Q+ DD +D
Sbjct: 209 AYQILDDYID 218


>gi|241912483|gb|ACS71955.1| putative geranylgeranyl pyrophosphate synthase [Azospirillum
           brasilense]
          Length = 338

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L          + A +E IH  +L+HDD+  +D   +RRG  + +
Sbjct: 57  GGKRLRPVLTLAAAELCGYKGEDHKMLAAVVEFIHTATLLHDDV--VDESDLRRGLASAN 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +   D +R   +LS    +  +G +  Q+    
Sbjct: 115 AVFGNKASVLVGDFLFSRSFELMVEVGSL--DVLR---ILSKASAVIAEGEVL-QLRTTN 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + K KT  L   AC  GA++A   Q E+  L  +G NLGI FQL DD+L
Sbjct: 169 DTETSEQAYLEVIKAKTAELFAAACRVGAVVAARPQAEELALYDYGMNLGIAFQLVDDVL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|227499442|ref|ZP_03929553.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC
           35098]
 gi|227218504|gb|EEI83747.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC
           35098]
          Length = 275

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 16/196 (8%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGY 99
           A+ YAL  GK+IR+ L  E   L + N +    L    AIE I  YSL+HDDLP+MD+  
Sbjct: 34  AMLYALEAGKRIRASLFLETRRL-SRNQIDKNDLLFALAIEMIQAYSLVHDDLPAMDDDD 92

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYA----FEIISSPKTQLKDNIRSQLMLSLTHNIG 155
            RRGK ++H  + E   I+ G+ LL  A    FEI S   + +K    SQ +LS T   G
Sbjct: 93  YRRGKESLHKHFGEDLGILTGDALLNEATKLMFEIASRDSSFIK---ASQYLLSKT---G 146

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GM+ GQ+LD++    +  + F+I+    KT      A  +GA++    Q+    L  +
Sbjct: 147 KDGMIEGQILDLRRR-RNYNKDFIIEVYDKKTADFFKGAIVAGALVNGFDQDTINSLERY 205

Query: 214 GENLGIIFQLADDLLD 229
              LG+ FQ+ DDLL+
Sbjct: 206 AYYLGLGFQIQDDLLE 221


>gi|206900678|ref|YP_002251005.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
           [Dictyoglomus thermophilum H-6-12]
 gi|206739781|gb|ACI18839.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
           [Dictyoglomus thermophilum H-6-12]
          Length = 343

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 17/237 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL-LSAIRYALLGGKKIRSFLVTECAS 63
           + +KLQEN  +  T +  + L TA HM     D + ++ IR     GK++R         
Sbjct: 13  IENKLQENWSKFSTNIP-IHLITAYHMGWVDEDLIPITNIR----RGKRLRPLFCVLVNQ 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N     AL +G+AIE +H +SL+HDD+   D    R GK TV   + E  AI  G+ L
Sbjct: 68  TLNGVLDDALEIGSAIEFLHNFSLVHDDIQDQDEK--RHGKWTVWKIWGEAQAINVGDLL 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
               F+++++ K+ L     S+ +  LT  I  + ++ GQ LDI  E    I   +  M+
Sbjct: 126 FNMVFQVLTNLKSPLL---LSKSLKELTETI--RELIEGQYLDISFEKRKDISLKEYLMM 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
              KT  L   +   GA  A   +   +  +  G N G+ FQ+ADD +    D P+K
Sbjct: 181 IDKKTAKLFSTSFYLGAFSATYKEEISKLFQDIGRNFGLFFQIADDAMGIWGD-PEK 236


>gi|315646907|ref|ZP_07900022.1| Polyprenyl synthetase [Paenibacillus vortex V453]
 gi|315277837|gb|EFU41161.1| Polyprenyl synthetase [Paenibacillus vortex V453]
          Length = 794

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 3/200 (1%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L+    Y L G GK++R  L      + + +     + +  ++E +H  SLI DDLPS D
Sbjct: 534 LIDTANYTLEGDGKRLRPILTWVMGVNEYGLEPSAIVPLLRSLEYMHTASLIFDDLPSQD 593

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG+PT+H  ++  TA I G  L+  A E  SS       ++ S +  S +   G 
Sbjct: 594 NASTRRGRPTLHQVHNSATAEITGLYLIQKAIEEQSSLVGFDASSVVSLIQYS-SKRAGE 652

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             M     LD + + +   Q+ MI   KTG     +    AI+A  ++ E   L+ F  +
Sbjct: 653 MCMGQAMDLDSKGKKLTLEQLNMICFYKTGIAFEASLVMPAILAQVNEAEIALLKKFAYH 712

Query: 217 LGIIFQLADDLLDCEEDLPK 236
            GI FQ+ DDLLD + DL +
Sbjct: 713 AGIAFQIKDDLLDVQGDLER 732


>gi|260653869|dbj|BAI44337.1| geranylgeranyl diphosphate synthase [Streptomyces
           melanosporofaciens]
          Length = 359

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 114/251 (45%), Gaps = 38/251 (15%)

Query: 6   PSKLQENS--KRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECA 62
           P +L  ++  K +D +L+D L   A H   QH+   LS + +  L GGK+IR  L   C 
Sbjct: 8   PGRLDADTVRKSVDVVLEDFLTAKA-HTTPQHHLPYLSGLLKDFLSGGKRIRPLL---CV 63

Query: 63  SLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------- 109
           + +       +     RV A +E  H ++LIHDD+  MD+   RRG+PT+H         
Sbjct: 64  TGWQAVGGGEDTEPVFRVAACLEMFHAFALIHDDV--MDDSDTRRGRPTIHRTLAALCAT 121

Query: 110 --------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                   ++    A++ G+  LT++ E++ S        ++   +L L   +  + ML 
Sbjct: 122 DRRPEQIERFGVSGAVLLGDLALTWSDELLHSAGLT---PVQFDAVLPLLSEMRTEVML- 177

Query: 162 GQMLDIQ--DEFIDETQVFM-IQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENL 217
           GQ LD+Q   E  D+ +  + + + KT           GA +A A     E    +   L
Sbjct: 178 GQYLDLQATGELTDDVEATLTVNRYKTAKYTIERPLHVGAAIAGAGPEAMEAFTAYALPL 237

Query: 218 GIIFQLADDLL 228
           G  FQL DDLL
Sbjct: 238 GEAFQLRDDLL 248


>gi|197119777|ref|YP_002140204.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
 gi|197089137|gb|ACH40408.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
          Length = 322

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A L   +   ++ + + +E IH  +L+HDD+  +DN  +RRG  + +
Sbjct: 41  GGKRIRPGLVLLAARLCGYDGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++ +       ++R   +L+    I  +G +  Q++   
Sbjct: 99  TLWGNEASVLVGDFLFSKSFSLMVT-----DGDLRILKVLADATTIIAEGEVL-QLVCTS 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I   +   + + KT  L+  ACE GAI+  A    ++ L  +G +LGI FQL DD L
Sbjct: 153 DLDITVERYIEVVRSKTAILLSAACEVGAILGEADPVHRQALADYGMDLGIAFQLMDDTL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|226941879|ref|YP_002796953.1| IspB [Laribacter hongkongensis HLHK9]
 gi|226716806|gb|ACO75944.1| IspB [Laribacter hongkongensis HLHK9]
          Length = 322

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLL--SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           I DD+L       ++ H+D +L      Y +  GGK++R  L+   A             
Sbjct: 10  ITDDMLAVDQVIRRSLHSDVVLIRQVAEYIIGAGGKRLRPALLILAARALGCQGPAVHEQ 69

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IECIH  +L+HDD+  +D    RRG+ T +  +    +++ G+ L T AF+++    
Sbjct: 70  AAMIECIHTATLLHDDV--VDESDKRRGRDTANAMFGNAASVLVGDFLYTRAFQMMVHTH 127

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           +     +R   +++   NI  +G +  Q+L+I +  + ET+   + + KT  L   A   
Sbjct: 128 S-----LRVLEIMAEATNIIAEGEVM-QLLNIGNTDLTETEYLQVIQYKTAKLFEAAGRV 181

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GA++A A+  ++  L  +G +LG  FQ+ DD+LD   D
Sbjct: 182 GALLAGATPEQEAALAGYGMHLGTAFQIIDDVLDYSGD 219


>gi|66814354|ref|XP_641356.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4]
 gi|74855905|sp|Q54VJ9|DPS1_DICDI RecName: Full=Decaprenyl-diphosphate synthase; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           1; AltName: Full=Coenzyme Q biosynthesis protein 1;
           AltName: Full=Decaprenyl pyrophosphate synthase;
           AltName: Full=Trans-prenyltransferase; Short=TPT
 gi|60469379|gb|EAL67373.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4]
          Length = 456

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 13/206 (6%)

Query: 27  TASHMQTQHNDRLLSAIR--YALLGGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIH 83
           T S   ++    +LS+I   Y  L GK+IR  +V   + +L +  H + L++   +E IH
Sbjct: 157 TYSPSPSKKTHPILSSISSYYFELKGKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMIH 216

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+HDD+  +D    RR   +++  Y    AI+ G+ LL  A  ++S+ +        
Sbjct: 217 TASLVHDDV--IDEASTRRDVISINHSYTNKLAILCGDYLLARASVVLSTIRNPDVTECM 274

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           S  +  L     +Q    G +    D ++ +T       +KTG+L+  +C S AI++ A 
Sbjct: 275 STALAELVEGEFMQAKSNGVVS--FDNYLQKTY------LKTGSLITNSCRSAAILSGAD 326

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
            N       FG+NLG+ FQ+ DDLLD
Sbjct: 327 SNIINISTEFGKNLGLAFQIVDDLLD 352


>gi|294792178|ref|ZP_06757326.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27]
 gi|294457408|gb|EFG25770.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27]
          Length = 323

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ L    A+         +++  A+E +H  +LIHDD+  +D   IRRG+ T+H
Sbjct: 46  GGKRLRAQLCLLIANAGTSIERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +      AI++G+ L   AF+I+S         + S ++  L           G+ + ++
Sbjct: 104 MHKGNKVAILSGDYLFAKAFKIVSEMTNMKYLQVFSHIITCLVE---------GEFMQME 154

Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + ID+  + +M +  K  A     C E G ++    ++E   L+ +G  LG+ FQ+ D
Sbjct: 155 DVYRIDQGIERYMTKTQKKTADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITD 214

Query: 226 DLLDCEE 232
           D++D  E
Sbjct: 215 DIMDYRE 221


>gi|285017833|ref|YP_003375544.1| octaprenyl-diphosphate synthase [Xanthomonas albilineans GPE PC73]
 gi|283473051|emb|CBA15556.1| putative octaprenyl-diphosphate synthase protein [Xanthomonas
           albilineans]
          Length = 331

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVT----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  LV      C S    +H    ++ A IE IH  +L+HDD+  +D   +RRG+
Sbjct: 52  GGKRLRPMLVMLAGRACGSHGPKHH----QLAAIIEFIHTSTLLHDDV--VDESDLRRGR 105

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + +F+++     +L      +L+   T+ I    +L  Q+
Sbjct: 106 STANALWGNAPSVLVGDFLYSRSFQLM----VELDSMAVMRLLADTTNRIAEGEVL--QL 159

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L + +   DE     + + KT  L       GA+ A A+   ++ L  +G +LG  FQ+A
Sbjct: 160 LHVHNPDTDEAAYLQVIERKTAVLFAAGTRLGALAAGATDAVQQCLYAYGMHLGYAFQIA 219

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 220 DDVLDYTAD 228


>gi|238062225|ref|ZP_04606934.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
 gi|237884036|gb|EEP72864.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
          Length = 356

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 25/189 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 74  GGKRFRPLLVALGAQFGDPTDPQVVSAAVVMELTHLATLYHDDV--MDEAAVRRGAPSAN 131

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++    AI+ G+ L   A +I +   P+      ++++    L H         GQ+ +
Sbjct: 132 SRWTNSVAILVGDYLFARAADISADLGPEAV---RLQARTFARLVH---------GQIAE 179

Query: 167 I------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
                  QD     +    +   KTG+L+  +   G + A AS    E L  +GE +G+ 
Sbjct: 180 TVGPRNGQDPV---SHYLHVIAEKTGSLIATSARFGGLFAGASATHTEALAGYGETIGVA 236

Query: 221 FQLADDLLD 229
           FQL+DDLLD
Sbjct: 237 FQLSDDLLD 245


>gi|302557115|ref|ZP_07309457.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
 gi|302474733|gb|EFL37826.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
          Length = 378

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 87  GGKAVRPALAVLSAEVTGAAPETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++     +L      +    LT     + ++ GQ  DI 
Sbjct: 145 KVHGPAQAILVGDALFALANEVL----LELGSVEAGRATRRLT--AASRALIDGQAQDIS 198

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 199 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADALERYGYHLGLAFQAVD 258

Query: 226 DLL 228
           DLL
Sbjct: 259 DLL 261


>gi|297617605|ref|YP_003702764.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145442|gb|ADI02199.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 322

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V    S ++ +    + +  A+E +H  +L+HDD+  +DN + RRG+ TV 
Sbjct: 43  GGKRLRPAFVLLSGSFYSSSLDGLIPLAVALELVHMATLVHDDV--IDNSFTRRGQKTVK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    ++ +GN +L  +  +I++ +     +I + + + +     +Q +      D+ 
Sbjct: 101 ACWGNRVSLYSGNYILAKSLSLIAAYERPDIIDILATVSMKVCEGEIIQML---SCFDVG 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             + D  +     + KT  LM  +C++GA++  A  ++   LR FG  LG+ FQ+ DD+L
Sbjct: 158 QGYKDYLRRI---ERKTALLMSLSCQTGALVGGAPADKVTVLRRFGYYLGMAFQITDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|262202925|ref|YP_003274133.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247]
 gi|262086272|gb|ACY22240.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247]
          Length = 376

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 95/216 (43%), Gaps = 34/216 (15%)

Query: 45  YALLGGKKIRSFLV---TECA------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L GGK+IR   V     C                 LRV AA+E +   +LIHDD+  +
Sbjct: 50  FVLQGGKRIRPVFVYAGWRCGISARAAGADAAEAADTLRVCAALELVQACALIHDDI--I 107

Query: 96  DNGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS--SPKTQ 137
           D    RRG+PTVH  ++                   AI+AG+  L +A +++   +P   
Sbjct: 108 DRSDTRRGRPTVHRDFEHRHRDRQWSGDPGGFGVAAAILAGDLALAWADDLVHGLAPGAA 167

Query: 138 LKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGAL-MCFA 192
             D+       +  T       +LGGQ LDI +E   +  V   + + + KT A  +   
Sbjct: 168 PDDDATPLPAPVGATWASMRTEVLGGQYLDIVNEAAGDESVQAAYQVMEYKTAAYTVARP 227

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E GA MA A  +    LR  G +LGI FQL DDLL
Sbjct: 228 LELGARMAGAPADLIADLRSVGHDLGIAFQLRDDLL 263


>gi|29828193|ref|NP_822827.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29605295|dbj|BAC69362.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
          Length = 376

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 85  GGKAVRPALAVLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 142

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T        +L  +       + ++ GQ  DI 
Sbjct: 143 KVHGPAQAILVGDALFALANEILLELGTVEAGRATRRLTTAS------RALIDGQAQDIS 196

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  AC  GA++  A     + L  +G +LG+ FQ  D
Sbjct: 197 YEHRERVTVEECLEMEGNKTGALLACACSIGAVLGGADDRTADTLEKYGYHLGLAFQAVD 256

Query: 226 DLL 228
           DLL
Sbjct: 257 DLL 259


>gi|53711383|ref|YP_097375.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46]
 gi|60679701|ref|YP_209845.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC
           9343]
 gi|253564510|ref|ZP_04841967.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5]
 gi|265764829|ref|ZP_06093104.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
           sp. 2_1_16]
 gi|52214248|dbj|BAD46841.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46]
 gi|60491135|emb|CAH05883.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC
           9343]
 gi|251948286|gb|EES88568.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5]
 gi|263254213|gb|EEZ25647.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
           sp. 2_1_16]
 gi|301161165|emb|CBW20703.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis
           638R]
          Length = 324

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVAKLYGEIKPETLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++ G+ LL  A  ++ + +T      R+  ++ +   +G Q +  G++L   +
Sbjct: 103 IFNNKVAVLVGDFLL--ATSLVHAERT------RNHDIIGVVACLG-QDLAEGEILQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    ET  F + + KT AL     ++ A+    +  + E  R FGEN+GI FQ+ DD
Sbjct: 154 VSNREYSETIYFDVIRKKTAALFAACTKAAALSVEVTDEKAEFARLFGENIGICFQIKDD 213

Query: 227 LLDCEE 232
           + D  E
Sbjct: 214 IFDYFE 219


>gi|330994653|ref|ZP_08318576.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1]
 gi|329758294|gb|EGG74815.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1]
          Length = 334

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 12/189 (6%)

Query: 49  GGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  L    A L     +  H   + + A +E IH  +L+HDD+  +D   +RRG 
Sbjct: 49  GGKRLRPLLTLASARLCGYQPDATHQRHVGLAACVEFIHTATLLHDDV--VDESSLRRGM 106

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            + +  +    +++ G+ L   +F++++   +    NI S    ++     LQ      +
Sbjct: 107 ASANAVFGNKASVLVGDFLFARSFQLMTDDGSLKVMNILSSASATIAEGEVLQMSTQNDL 166

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D++++      +   KT AL   AC  GA++A   +  +  L  +G NLG+ FQL 
Sbjct: 167 STRIDQYLE------VIHGKTAALFAAACRVGAVVAERDETVERALESYGTNLGMAFQLV 220

Query: 225 DDLLDCEED 233
           DD LD   D
Sbjct: 221 DDALDYAAD 229


>gi|89900061|ref|YP_522532.1| farnesyltranstransferase [Rhodoferax ferrireducens T118]
 gi|89344798|gb|ABD69001.1| Farnesyltranstransferase [Rhodoferax ferrireducens T118]
          Length = 327

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 9/187 (4%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY +  GGK++R  L+                + A +E IH  +L+HDD+  +D+  +RR
Sbjct: 42  RYIIAAGGKRLRPALLLLICGALGFKGAQRFNLAAVVEFIHTSTLLHDDV--VDDSSLRR 99

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G PT +  +    +++ G+ L +  F+++   +     N+R   +L+   N+  +G +  
Sbjct: 100 GNPTANETFGNPASVLVGDFLYSRCFQMMVDAQ-----NMRIMQVLADATNVIAEGEVQ- 153

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q++++ +  +DE     + + KT  L   +   GAI+A +S   +E    +G+ LG  FQ
Sbjct: 154 QLMNMHNAELDEAGYLQVIRSKTAKLFEASARVGAILAGSSPELEEICAEYGQALGTAFQ 213

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 214 VIDDVLD 220


>gi|15964599|ref|NP_384952.1| putative octaprenyl-diphosphate synthase protein [Sinorhizobium
           meliloti 1021]
 gi|307309345|ref|ZP_07589008.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C]
 gi|307320081|ref|ZP_07599502.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83]
 gi|15073777|emb|CAC45418.1| Putative octaprenyl-diphosphate synthase [Sinorhizobium meliloti
           1021]
 gi|306894296|gb|EFN25061.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83]
 gi|306900214|gb|EFN30832.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C]
          Length = 338

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASMFGYEGDGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSIDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A  S+ ++  L+ +G NLG+ FQL DD+L
Sbjct: 175 DDYL------QVIRAKTAALFAAASEVGPIVAGGSKADRNALKSYGTNLGLAFQLVDDVL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|304383744|ref|ZP_07366203.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973]
 gi|304335268|gb|EFM01539.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973]
          Length = 327

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 12/199 (6%)

Query: 34  QHNDRLLS-AIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           +H+D LLS A+ +    GGK++R  L+   A  +      A      +E +H  SL+HDD
Sbjct: 29  EHSDGLLSMALEHIKQRGGKRMRPILILLLAKNYGTITDAAHHAAVGLELLHTASLVHDD 88

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RRG+ +V+  Y+   A++ G+ +L+ A   ++  ++    N  +QL  +L+
Sbjct: 89  V--VDESSERRGQSSVNATYNNKVAVLVGDYILSTALLHVAYTQSDYIINSLAQLGRTLS 146

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210
               LQ      + +IQ+E I E   + + + KT AL    C + A  A  + NE  E  
Sbjct: 147 KGEILQ------LTNIQNEEISEEVYYQVIEQKTAALFE-TCAAVAAKAAGASNESIEAA 199

Query: 211 RCFGENLGIIFQLADDLLD 229
           R FG +LG IFQ+ DD+ D
Sbjct: 200 RKFGRDLGTIFQIRDDIFD 218


>gi|258648864|ref|ZP_05736333.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259]
 gi|260850886|gb|EEX70755.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259]
          Length = 326

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 22/213 (10%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           DD L Q  SHM+ ++              GK +R  LV   A  F       LR    +E
Sbjct: 32  DDFLGQALSHMRRRN--------------GKMMRPILVLLAAKAFAPISEKTLRSAVTLE 77

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SLIHDD+  +D+   RRG+ +V+  +    A++ G+ LL+ +       +  L D
Sbjct: 78  LLHTASLIHDDV--VDDSGERRGQASVNALFGNKVAVLVGDYLLSKSLH-----QAYLTD 130

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           ++R   +++       +G +  Q+ +I+     E   F + + KT AL       GAI A
Sbjct: 131 DLRIVEIVARLGGTLAEGEVK-QLANIRQSVATEEAYFDVIRHKTAALFAACTRLGAISA 189

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +    E+   FGE +G+ FQ+ DD+ D  +D
Sbjct: 190 DCAPATVEQAATFGEIIGLCFQIRDDIFDYYDD 222


>gi|289704598|ref|ZP_06501030.1| polyprenyl synthetase [Micrococcus luteus SK58]
 gi|289558678|gb|EFD51937.1| polyprenyl synthetase [Micrococcus luteus SK58]
          Length = 354

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 53/248 (21%)

Query: 7   SKLQENSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + L++  +++D  L  DDL   TA+H        LL+A      GGK++R  L T  ASL
Sbjct: 29  TALEQVEEQLDGALGFDDLFSDTAAH-------HLLAA------GGKRVRPVL-TVLASL 74

Query: 65  FNVNHLT----------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
                L           A +    +E  H  +L HDD+  MD   +RRG P  H  +   
Sbjct: 75  LGDPALASGEVADVDAPARQAAVVMELTHLATLYHDDV--MDEAPVRRGAPAAHRLWGNS 132

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQG-----MLGGQMLDIQ 168
            AI+AG+ +   A                SQLM  L    + +Q      ++ GQ+ + +
Sbjct: 133 AAILAGDLIFARA----------------SQLMAELGPRPVQIQADTFERLVQGQLWETR 176

Query: 169 D--EFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              E  D  +  + +   KTG+L+  A   GA++  A +   + +  +GE +G+ FQLAD
Sbjct: 177 GPAEGADPIEHYYAVLSGKTGSLIAAAGMLGALLGGADEAAVQVMSAYGEKVGLAFQLAD 236

Query: 226 DLLDCEED 233
           DL+D   D
Sbjct: 237 DLIDLTGD 244


>gi|160888684|ref|ZP_02069687.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492]
 gi|156861998|gb|EDO55429.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492]
          Length = 324

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A LF       L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLFGKVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++AG+ LL  A   +           R+  ++ +   +G Q +  G++L   +
Sbjct: 103 IFNNKVAVLAGDYLLATALVQVGM--------TRNHDIIDIVSCLG-QDLADGELLQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    E   F + + KT  L     ++GA+   AS  + E  R FGE +G+ FQ+ DD
Sbjct: 154 VSNLHFSEEVYFDVIRKKTAVLFAACTKAGALSVGASDEKAESARLFGEYIGLCFQIKDD 213

Query: 227 LLDCEE 232
           + D  E
Sbjct: 214 IFDYSE 219


>gi|213021975|ref|ZP_03336422.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 226

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 10/200 (5%)

Query: 32  QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           Q   + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+H
Sbjct: 24  QLNSDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLH 83

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S
Sbjct: 84  DDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMS 136

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ 
Sbjct: 137 EAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKG 195

Query: 210 LRCFGENLGIIFQLADDLLD 229
           L+ +G  LG  FQL DDLLD
Sbjct: 196 LQDYGRYLGTAFQLIDDLLD 215


>gi|193212799|ref|YP_001998752.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086276|gb|ACF11552.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 324

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 31/205 (15%)

Query: 44  RYALLG-GKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           RY L   GK+IR  LV      C  + +V +  A+ V    E +H  +LIHDD+  +D  
Sbjct: 37  RYVLRQQGKQIRPTLVILGAKVCGGVGDVTYRGAIMV----ELLHSATLIHDDV--VDGA 90

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLT----YAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            +RRG P+++  +    +++ G+ LL+    Y+ E           + RS  ++S     
Sbjct: 91  EMRRGIPSINALWKNKISVLIGDYLLSKGLLYSLE---------NSDYRSLHLVSE---- 137

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            ++ M  G++L IQ      I E     +   KTG+L+  +C  GA  A  S+ E  RL+
Sbjct: 138 AVRRMSEGEILQIQKTRSLDITEEDYLSVIADKTGSLIATSCAIGAASATDSEEEIARLK 197

Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
            +GE LG+ FQ+ DDLLD   D  K
Sbjct: 198 HYGEFLGLAFQIRDDLLDYTGDSKK 222


>gi|282850553|ref|ZP_06259932.1| polyprenyl synthetase [Veillonella parvula ATCC 17745]
 gi|282580046|gb|EFB85450.1| polyprenyl synthetase [Veillonella parvula ATCC 17745]
          Length = 323

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ L    A+         +++  A+E +H  +LIHDD+  +D   IRRG+ T+H
Sbjct: 46  GGKRLRAQLCLLIANAGTSIERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +      AI++G+ L   AF+I+S         + S ++  L           G+ + ++
Sbjct: 104 MHKGNKVAILSGDYLFAKAFKIVSEMTNMKYLQVFSHIITCLVE---------GEFMQME 154

Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + ID+  + +M +  K  A     C E G ++    ++E   L+ +G  LG+ FQ+ D
Sbjct: 155 DVYRIDQGIERYMTKTQKKTADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITD 214

Query: 226 DLLDCEE 232
           D++D  E
Sbjct: 215 DIMDYRE 221


>gi|294794043|ref|ZP_06759180.1| putative heptaprenyl diphosphate synthase component II [Veillonella
           sp. 3_1_44]
 gi|294455613|gb|EFG23985.1| putative heptaprenyl diphosphate synthase component II [Veillonella
           sp. 3_1_44]
          Length = 323

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ L    A+         +++  A+E +H  +LIHDD+  +D   IRRG+ T+H
Sbjct: 46  GGKRLRAQLCLLIANAGTSIERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +      AI++G+ L   AF+I+S         + S ++  L           G+ + ++
Sbjct: 104 MHKGNKVAILSGDYLFAKAFKIVSEMTNMKYLQVFSHIITCLVE---------GEFMQME 154

Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + ID+  + +M +  K  A     C E G ++    ++E   L+ +G  LG+ FQ+ D
Sbjct: 155 DVYRIDQGIERYMTKTQKKTADFMEGCMELGGLLGDWQESEIIELKKYGHALGMAFQITD 214

Query: 226 DLLDCEE 232
           D++D  E
Sbjct: 215 DIMDYRE 221


>gi|254442381|ref|ZP_05055857.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
 gi|198256689|gb|EDY80997.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
          Length = 312

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 16/213 (7%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA--LRVGA 77
           LD  L++  S  + +  +    +I     GGK+IR  L+   +   N   +    +R+ A
Sbjct: 4   LDAFLMEQISQFEPEIREHAAYSID---TGGKRIRPSLIF-FSGWQNDGQVDEKLVRLAA 59

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKT 136
            +E +H  +L+HDD+  MD   IRR + TV  +Y+  TA++ G+ L ++A  + +  P  
Sbjct: 60  VVETVHLATLVHDDI--MDEADIRRNRATVAKKYNNATAVLLGDALFSHAVYLATQFPTN 117

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
           ++  +I   +    T  I LQ M  G      D  +D    F +  +KT  L   +C  G
Sbjct: 118 EVCRDIAVSMRQVCTGEI-LQTMQRG------DPDLDMATYFRVIDLKTAELFRVSCHLG 170

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A +A    +  +    FG +LGI +Q+ DD+ D
Sbjct: 171 ARLAGFEDSYVQAAGAFGRHLGIAYQIYDDMTD 203


>gi|237756556|ref|ZP_04585080.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691284|gb|EEP60368.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 317

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 19/187 (10%)

Query: 49  GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R +LV + + +  N N      + AA+E +H  SL+HDD+  +D   +RRGKPT 
Sbjct: 35  GGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEYLHTASLLHDDV--VDGSQLRRGKPTA 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQML 165
           +  +   T ++ G+ +   A  + S+              + +  N+   ++ M  GQ+L
Sbjct: 93  NRIFGNDTTVLTGDYMYANALYLFSTHGD-----------IDMIKNVSQTVKKMAEGQLL 141

Query: 166 D---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +   I D  I   + + I + KT AL    C  G  +   ++  K++   +G N+G+ FQ
Sbjct: 142 ELKKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQKAFEYGLNIGMAFQ 201

Query: 223 LADDLLD 229
           + DDLLD
Sbjct: 202 IVDDLLD 208


>gi|226294533|gb|EEH49953.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
           brasiliensis Pb18]
          Length = 374

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A    S 
Sbjct: 116 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRA----SV 169

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQV-FMIQK--MKTGA 187
              +L+D    +L+ ++  N+ ++G    L    LD ++ F  E  + + +QK  +K+ +
Sbjct: 170 ALARLRDPEVIELVATVIANL-IEGEFMQLRNTELDEENPFFTEEAITYYLQKTYLKSAS 228

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 229 LISKSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLD 270


>gi|52549424|gb|AAU83273.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
           archaeon GZfos27B6]
          Length = 360

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 7/184 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L      L       AL     IE  H +SL HDD+   D+  +RRG+P +H
Sbjct: 61  GGKRLRPSLCLMACELVGGEIKKALPTAICIEFFHNFSLAHDDIE--DDSKLRRGEPALH 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++Y    A+ AG+GL   ++E + + +  L      ++   +     +  +  GQ +D++
Sbjct: 119 VKYGIPIAVNAGDGLYALSYEALKANRNLLGLERAWKIFEEIAELCVV--LSEGQAMDLE 176

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               + + E +V    + KT  L   + + GAI   AS    E L    E++GI FQ+ D
Sbjct: 177 FKERKEMGELEVIETLRKKTAKLFGVSAKCGAIAGGASHETAEDLSSAWEDIGIAFQIRD 236

Query: 226 DLLD 229
           D+L+
Sbjct: 237 DILN 240


>gi|319639120|ref|ZP_07993876.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102]
 gi|317399597|gb|EFV80262.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102]
          Length = 324

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIITILAGKAVGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|261379260|ref|ZP_05983833.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703]
 gi|284797691|gb|EFC53038.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703]
          Length = 324

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIITILAGKAVGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|297201657|ref|ZP_06919054.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus
           ATCC 29083]
 gi|197710971|gb|EDY55005.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus
           ATCC 29083]
          Length = 336

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVDSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
            ++    A++ G+ L   A  I++    +    +R Q       +   + ++ GQ+L+  
Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPE---AVRVQ-------SEAFERLVTGQILETA 160

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             QD          +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+ FQLAD
Sbjct: 161 GPQDGRDPVEHYLDVLGGKTGSLVAVSCRFGAMMSGADERVVDVLTQYGERLGVAFQLAD 220

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 221 DVLDIASD 228


>gi|182677848|ref|YP_001831994.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633731|gb|ACB94505.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 336

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 55  GGKRLRPMLTLAAAGLCGYGGNGHIKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +     +    +LS    +  +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFKMMVEVGS-----LACLEVLSTAAAVIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT AL   A E GA++A   + E    R +G NLGI FQL DD L
Sbjct: 167 DTETGEDDYLAVIRAKTAALFGAAAEVGALLAERPKAEIAACRSYGLNLGIAFQLIDDAL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|225075990|ref|ZP_03719189.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens
           NRL30031/H210]
 gi|224952705|gb|EEG33914.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens
           NRL30031/H210]
          Length = 324

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIITILAGKAVGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYLQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|312888574|ref|ZP_07748143.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM
           18603]
 gi|311298888|gb|EFQ75988.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM
           18603]
          Length = 323

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 32/196 (16%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR   +   ASL    + +  R  A +E +H  +L+HDD+  +DN Y RRG  +++ 
Sbjct: 45  GKQIRPMFLFLSASLCGGINESTHRGAALVELLHTATLVHDDV--VDNSYQRRGFFSINA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQGML 160
            +    A++ G+ LL+                    L+LS+ +N           ++ M 
Sbjct: 103 LWKNKIAVLVGDFLLSKG------------------LLLSIENNDFHLLKIVSEAVRQMS 144

Query: 161 GGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            G++L I+      IDE   + + + KT +L+   C  GA  + A     E++R FGE +
Sbjct: 145 EGELLQIEKVRRMDIDEPVYYDVIRQKTASLIASCCACGAASSGADDATVEKMRLFGEKI 204

Query: 218 GIIFQLADDLLDCEED 233
           GI FQ+ DD+ D   D
Sbjct: 205 GIAFQIKDDMFDFGTD 220


>gi|270295030|ref|ZP_06201231.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478023|ref|ZP_07937205.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
 gi|270274277|gb|EFA20138.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905812|gb|EFV27584.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
          Length = 324

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A LF       L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLFGKVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++AG+ LL  A   +           R+  ++ +   +G Q +  G++L   +
Sbjct: 103 IFNNKVAVLAGDYLLATALVQVGMT--------RNHDIIDIVSCLG-QDLADGELLQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    E   F + + KT  L     ++GA+   AS  + E  R FGE +G+ FQ+ DD
Sbjct: 154 VSNLHFSEEVYFDVIRKKTAVLFAACTKAGALSVGASDEKAESARLFGEYIGLCFQIKDD 213

Query: 227 LLDCEE 232
           + D  E
Sbjct: 214 IFDYSE 219


>gi|134101179|ref|YP_001106840.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291004002|ref|ZP_06561975.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133913802|emb|CAM03915.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 335

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 6/189 (3%)

Query: 44  RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RYALL  GK +R  ++   A     +    +    A+E +H  SL+HDD+  +D    RR
Sbjct: 39  RYALLSPGKLLRPLMLVASAEAVGGDREAVMPAALAVEYLHAASLVHDDI--IDGDDTRR 96

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+ +VH +Y    AII G+ L+   F  ++       D + +  +L+   +   +G +  
Sbjct: 97  GRASVHARYGVADAIITGDALIIRLFGSLAECPVPDADVLSAVRILARAGDDLCRGQMRE 156

Query: 163 QML--DIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            +L              ++ +  +KTGAL   AC++GA++   +  E   +  F E+ G+
Sbjct: 157 ALLVPPAPGALGSGLAAYLGMAALKTGALFRGACQAGAVLGGGTPGEVGIVAEFAEHTGL 216

Query: 220 IFQLADDLL 228
            FQ+ DDLL
Sbjct: 217 AFQMYDDLL 225


>gi|89099928|ref|ZP_01172799.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. NRRL B-14911]
 gi|89085320|gb|EAR64450.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. NRRL B-14911]
          Length = 788

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 8   KLQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS----FLV 58
           K++E  KRI+ +L     DLL+           + +  A  Y+L  GGK++R     F+ 
Sbjct: 503 KVEEVQKRINNVLRIEDKDLLM----------GEPVREAANYSLAAGGKRLRPVIAWFVG 552

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            E   +     +  LR   ++E +H  SLI DDLP+ DN   RRGK  VH  Y    A +
Sbjct: 553 VEAYGMEETALMPLLR---SLEYMHTASLIFDDLPAQDNAPSRRGKAAVHEVYGTAAAEL 609

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           +G  L   A E  +S  +   D +   +  +         M  GQ +D++   + +   +
Sbjct: 610 SGLYLTQKAMEDQASLTSSTPDAVLELIRYTARST---AEMCRGQAMDLEAKGKALTAGE 666

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +   KTG     +    AI+A A Q+E + L+ F  + GI FQ+ DDLLD E D
Sbjct: 667 LDALCFYKTGIAFEASIIMPAILAGAEQDEIDVLKKFARHAGIAFQIRDDLLDVEGD 723


>gi|258573655|ref|XP_002541009.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii
           1704]
 gi|237901275|gb|EEP75676.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii
           1704]
          Length = 477

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 219 RLAEITELIHTASLLHDDV--IDNAVTRRSGVSANLEFGNKMAVLAGDFLLGRASVALA- 275

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187
              +L+D   ++LM ++  N+ ++G         QDE    + ++   + +QK  +K+ +
Sbjct: 276 ---RLRDPEVTELMATVIANL-VEGEFMQLRNTAQDERNPAWTEDIITYYLQKTYLKSAS 331

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C S A++ H + +  E    +G NLG+ FQL DD+LD
Sbjct: 332 LISKSCRSAALLGHGAPDVVEAAYSYGRNLGLAFQLVDDMLD 373


>gi|302868180|ref|YP_003836817.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302571039|gb|ADL47241.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 339

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 24/233 (10%)

Query: 12  NSKRIDTILDDLLLQTASHM--------QTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            S R    +DDL    +  +          +  D+L + +RYALL  GK +R  +    A
Sbjct: 5   GSTRYPPFIDDLARSESGRLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L      E +H  +L+HDD+  +D   +RRG+P V + Y    AI+AG+ 
Sbjct: 65  EAVGGSPRDVLAAALGTEYLHVATLVHDDI--IDADTLRRGRPAVPVAYGIPGAIVAGDH 122

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLS------LTHNIGLQGMLGGQMLDIQDEFIDET 175
           L+ +AF+ ++ S +     ++ + +         L     L+  L G  LD    +  E 
Sbjct: 123 LIFHAFQAMVESGRAVPAASVVAAVTALAEAGQDLCRGQALEARLVGD-LDAGARWYPE- 180

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              MI ++KTG+L    C  GA++  A       L  +GE++G  FQ+ DDLL
Sbjct: 181 ---MI-RLKTGSLFRAVCHIGALLGGADPLVASGLARYGEHVGTAFQIRDDLL 229


>gi|116671675|ref|YP_832608.1| trans-hexaprenyltranstransferase [Arthrobacter sp. FB24]
 gi|116611784|gb|ABK04508.1| Trans-hexaprenyltranstransferase [Arthrobacter sp. FB24]
          Length = 367

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L   CA L + +    ++    +E  H  +L HDD+  MD+   RRG PT H
Sbjct: 85  GGKRIRPLLALLCAHLGDASRPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 142

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +    A++ G+ +   A  ++S   ++ L    R+   L L           GQ+ + 
Sbjct: 143 EVWGNSVAVLTGDLIFARASILVSELGSRALGIQARTFERLCL-----------GQLHET 191

Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                DE  V     +   KTG+L+  + + GAI A A +  +  L  +GE +G+ FQLA
Sbjct: 192 VGPRPDEDPVEHYLSVIADKTGSLVAASGQLGAIFAGADEAYEPLLVEYGEKIGVAFQLA 251

Query: 225 DDLLDC 230
           DD++D 
Sbjct: 252 DDVIDV 257


>gi|326793607|ref|YP_004311427.1| trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1]
 gi|326544371|gb|ADZ89591.1| Trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1]
          Length = 329

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 19/226 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRSFLV------TECASL 64
           +I  ++ D   Q   ++ +Q      L+  I Y ++  GGK++R  +V       + A  
Sbjct: 5   KIHDVVADEFSQVNDYILSQLKSEIPLIEQIGYYIISNGGKRMRPLMVLLAARAAQPAQG 64

Query: 65  FNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +   L+  +++ + IE IH  +L+HDD+  +D   +RRGK T + ++    +++ G+ L
Sbjct: 65  LSETQLSHTVKMASIIEFIHTATLLHDDV--VDESDMRRGKKTANEEWGNAPSVLVGDFL 122

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+I+ +  +     +    +LS T NI  +G +  Q+++  D    E     + + 
Sbjct: 123 YSRAFQIMVNVGS-----VPCMEILSNTTNIISEGEVQ-QLINCGDPDTSEESYLKVIQY 176

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT  L   A   GA++A AS+  ++ L+ +G  +G  FQL DD++D
Sbjct: 177 KTAKLFEGAALCGAVVAGASEEHQKALQAYGMYVGTAFQLVDDVMD 222


>gi|255010272|ref|ZP_05282398.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis
           3_1_12]
 gi|313148068|ref|ZP_07810261.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12]
 gi|313136835|gb|EFR54195.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12]
          Length = 324

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVAKLYGEIKPATLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++ G+ LL  A  ++ + +T      R+  ++ +   +G Q +  G++L   +
Sbjct: 103 IFNNKVAVLVGDFLL--ATSLVHAERT------RNHDIIGVVACLG-QDLAEGEILQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    ET  F + + KT AL     ++ A+    +  + E  R FGEN+GI FQ+ DD
Sbjct: 154 VSNREYSETIYFDVIRKKTAALFAACTKAAALSVEITDEKAEFARLFGENIGICFQIKDD 213

Query: 227 LLDCEE 232
           + D  E
Sbjct: 214 IFDYFE 219


>gi|325918710|ref|ZP_08180807.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325918918|ref|ZP_08180989.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325534852|gb|EGD06777.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325535077|gb|EGD06976.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
           35937]
          Length = 332

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + A  + ++RL  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADADVQQRLYDYGMQLGFAFQIADDVL 224

Query: 229 DC---EEDLPK 236
           D     EDL K
Sbjct: 225 DYAAEAEDLGK 235


>gi|240950200|ref|ZP_04754487.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305]
 gi|240295287|gb|EER46073.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305]
          Length = 327

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLITVLAARALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      D++    ++S   N   +G +  Q++++ 
Sbjct: 105 AAFGNAASVLVGDYIYTRSFQMMTSV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A+AS+  +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEENYMRVIYNKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|21226891|ref|NP_632813.1| farnesyltranstransferase [Methanosarcina mazei Go1]
 gi|20905197|gb|AAM30485.1| Geranyltranstransferase [Methanosarcina mazei Go1]
          Length = 295

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 18/185 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  ++   + + + ++  +L    A+E +H  SLIHDDL  +D G +RR  P+  
Sbjct: 49  GGKRIRPIILLLVSEICSGSYSRSLNAALAVEMMHSASLIHDDL--LDQGLVRRNLPSAP 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLD 166
            ++    A++ G+ L+  +   IS P  +            +  + G  GM    G++LD
Sbjct: 107 EKFGPSGALLCGDYLIAKSIAFIS-PYGE-----------KVIQDFGKAGMDMAEGEVLD 154

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +DE   E   F     KT +L   +   GA    A +   ER   FG  LG  +Q+ 
Sbjct: 155 LKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIV 214

Query: 225 DDLLD 229
           DD+L+
Sbjct: 215 DDILE 219


>gi|319956645|ref|YP_004167908.1| polyprenyl synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419049|gb|ADV46159.1| Polyprenyl synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 298

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 18/185 (9%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L  GK++R+ L+   A     + L+A++  A +E IH  SL+HDD+  +D+ Y RRG+P+
Sbjct: 28  LPAGKRLRARLILTIAG----SGLSAVKTAAIVEMIHAASLLHDDV--IDDAYTRRGRPS 81

Query: 107 VHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           ++  Y   T+I+ G+ L + AF E++         +I  Q+  S+ + + L  +   Q +
Sbjct: 82  INALYGNKTSIMFGDVLYSKAFYELV---------DIDRQVARSIANAVVLLSLGERQDV 132

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            + + F  +   ++  KM           +    A  +  ++E  R +G NLGI FQ+ D
Sbjct: 133 LLSESFNPDRDAYL--KMIYQKTAALIEAAAESAAILAGKDREAYRTYGRNLGIAFQMID 190

Query: 226 DLLDC 230
           D+LD 
Sbjct: 191 DILDI 195


>gi|73667942|ref|YP_303957.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro]
 gi|72395104|gb|AAZ69377.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 285

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 20/186 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  ++   + + + ++  +L    AIE +H  SLIHDDL  +D G +RR  P+  
Sbjct: 39  GGKRIRPIILLLSSEICSGSYQQSLNAALAIELMHSASLIHDDL--LDQGLVRRNLPSAP 96

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--MLGGQMLD 166
            ++    A++ G+ L+   FE I SP  +            +  + G  G  M  G++LD
Sbjct: 97  EKFGPSRALLCGDYLIAKCFEFI-SPYGE-----------KVVRDFGKAGMDMAEGEVLD 144

Query: 167 I---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   +D F  E   F     KT +L   +   GA    A +   ER   FG  LG  +Q+
Sbjct: 145 LRLDKDNF-GENNYFECIYKKTASLFAISASIGAYTGGADEVLAERFNFFGNCLGTAYQI 203

Query: 224 ADDLLD 229
            DD+L+
Sbjct: 204 VDDILE 209


>gi|308070091|ref|YP_003871696.1| geranyltranstransferase [Paenibacillus polymyxa E681]
 gi|305859370|gb|ADM71158.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Paenibacillus polymyxa E681]
          Length = 792

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 10/226 (4%)

Query: 16  IDTILDDLLLQ---TASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHL 70
           ++T+ D +  Q   T  H      ++L+ A  Y+L G GK+IR  L      + + ++  
Sbjct: 506 VETVRDQINNQLKITKPHGIEAMKEQLIDAANYSLEGDGKRIRPILTWVMGVNEYGLDAS 565

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             + +  ++E +H  SLI DDLPS DN   RRG+ T+H  ++  TA + G  L+  A   
Sbjct: 566 AIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRQTLHKVHNSATAELTGLYLIQKA--- 622

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGAL 188
           I    +  + N  + L L        + M  GQ +D+  + + +   Q+ M+   KTG  
Sbjct: 623 IGEQSSLSQFNAETVLALIQYSAQKAEDMCMGQAMDLDSKGKALTLEQLNMMCFYKTGVA 682

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                   A++A A + E   L+ F  ++GI FQ+ DDLLD E D+
Sbjct: 683 FEACLVMPAMLAQAEEPEIAALQKFAYHMGIAFQIKDDLLDVEGDM 728


>gi|167856324|ref|ZP_02479054.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755]
 gi|167852554|gb|EDS23838.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755]
          Length = 327

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++S ++     +    ++S   N+  +G +  Q++++ 
Sbjct: 105 ARFGNAASVLVGDFIYTRAFQMMASLRS-----LDVLQVMSDATNVIAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI++ A Q     +R +G  LG  FQL DD+L
Sbjct: 159 DPETTEANYMQVIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|329937106|ref|ZP_08286735.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045]
 gi|329303713|gb|EGG47598.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045]
          Length = 357

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 66  GGKAVRPALALLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T ++    ++ + S T     + ++ GQ  DI 
Sbjct: 124 KVHGPAQAILVGDALFALAGEVLLELGT-VEAGRAARRLTSAT-----RALIDGQAQDIS 177

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  AC  GA++  A     + L  +G +LG+ FQ  D
Sbjct: 178 YEHRDRVSVEECLEMEGNKTGALLACACSIGAVLGGADDEVADTLETYGHHLGLAFQAVD 237

Query: 226 DLL 228
           DLL
Sbjct: 238 DLL 240


>gi|309753137|gb|ADO85593.1| PenB [Streptomyces exfoliatus]
          Length = 337

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A         AL    A+E +H +SL+HDDL  MD    RR + TV  
Sbjct: 53  GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +   +AI+ G+ LL  A E++      L   + +    +       + ++ GQ+ D+  
Sbjct: 111 LWGSSSAILTGDALLALAQEVL------LDTGLPTAAPAARLLARTTRHLIRGQVQDLAF 164

Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            Q   +   +   +   KTGAL+  +   GA++A A +   + L  +G+ +G+ FQL DD
Sbjct: 165 EQRSHVTVEECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224

Query: 227 LLDCEED 233
           +L    D
Sbjct: 225 VLGIWGD 231


>gi|229160564|ref|ZP_04288559.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           R309803]
 gi|228622974|gb|EEK79805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           R309803]
          Length = 320

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 103/195 (52%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++ +  A+  G+ L   + E +++ +         +   +L+H I    +  G++  I
Sbjct: 100 NAKWGDRIAMYTGDYLFAKSLECVTNIEI-------PEAHQALSHTI--LEVCKGEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI + A++    RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIASGANRETVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|227544097|ref|ZP_03974146.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A]
 gi|300909796|ref|ZP_07127257.1| polyprenyl synthetase [Lactobacillus reuteri SD2112]
 gi|227185930|gb|EEI66001.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A]
 gi|300893661|gb|EFK87020.1| polyprenyl synthetase [Lactobacillus reuteri SD2112]
          Length = 326

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 28/197 (14%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK +R       A   N+NH TA      +++ +++E +H  +LIHDD+  +D+   RR
Sbjct: 45  GGKYLRPAFFLLFA---NINHQTADEQERLIKIASSLEVLHMATLIHDDI--IDDSPKRR 99

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGM 159
           G  +V   + + TA+  G+ L T  F+++    T    L  N R+           ++ +
Sbjct: 100 GAVSVQSAFGKDTAVYTGDFLFTIFFDLLVETMTGSPYLTRNART-----------MRKI 148

Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++  + + F +D++ +   + +  KT A+   A E GA   H+ +      +  G+N
Sbjct: 149 LTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYFGHSDRRTINLAKRIGQN 208

Query: 217 LGIIFQLADDLLDCEED 233
           +GI FQ+ DD+LD   D
Sbjct: 209 IGISFQILDDILDYSGD 225


>gi|49083716|gb|AAT51120.1| PA4569 [synthetic construct]
          Length = 323

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV                + A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L   +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 ALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +  A + + E LR FG+ LGI FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|269955291|ref|YP_003325080.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269303972|gb|ACZ29522.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 343

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 19/199 (9%)

Query: 37  DRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           DRL   + + L+  GGK++R FL      L +      +     +E  H  SL HDD+  
Sbjct: 45  DRLADDVAHHLVAAGGKRLRPFLTLLAGELGDGARTELVDAAVVVELTHLASLYHDDV-- 102

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLT 151
           MD+  +RRG P+VH  +    AI+ G+ L   A   ++   P+  +L+     +L L   
Sbjct: 103 MDSAPLRRGAPSVHSVWGNSVAILVGDLLFARASARVAGLGPEAVRLQAETFERLCLGQL 162

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERL 210
           H     G   G+         D  Q ++ +   KT +L+  +   GA+   A   + E +
Sbjct: 163 HET--TGPAEGE---------DPAQHYLQVLADKTASLLATSARLGAMFGGAPAEQVEVV 211

Query: 211 RCFGENLGIIFQLADDLLD 229
             +GE +G+ FQ+ADD+LD
Sbjct: 212 AAYGEKVGVAFQIADDVLD 230


>gi|72163080|ref|YP_290737.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX]
 gi|71916812|gb|AAZ56714.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX]
          Length = 334

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D LL + ASH        LL A      GGK+ R+ LV   A   +  +   +   A +E
Sbjct: 42  DPLLREAASH--------LLEA------GGKRFRAILVLLSARFGDATNPDLVSAAAVVE 87

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H  +L HDD+  MD   +RRG P+ + ++    AI+ G+ +   A EI++   T+   
Sbjct: 88  LTHVATLYHDDV--MDEAELRRGSPSANRRWGNTIAILTGDYVFARASEILADLGTEAV- 144

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            +++Q    L     L+       +D    ++D      +   KT +L+  +   GA++ 
Sbjct: 145 RLQAQTFGRLVRGQILETAGPRPGVDPMKHYLD------VIADKTASLIASSARFGAMVG 198

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +A     E L   G+ LG+ FQL+DD+LD 
Sbjct: 199 NADPEVVETLTRAGDALGMAFQLSDDILDV 228


>gi|56963654|ref|YP_175385.1| heptaprenyl diphosphate synthase component II [Bacillus clausii
           KSM-K16]
 gi|56909897|dbj|BAD64424.1| heptaprenyl diphosphate synthase component II [Bacillus clausii
           KSM-K16]
          Length = 323

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  LV   A  F    L  L+ +   +E IH  SL+HDD+  +DN  +RRG+ TV
Sbjct: 43  GGKRIRPVLVL-LAGKFGDYQLDRLKHIAVTLELIHMGSLVHDDV--IDNAPLRRGRETV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++D   A+  G+ +  +A E   +   +    I S +M  +           G++  I
Sbjct: 100 MSRWDNRVAMYTGDYIFGHAIETTKAFSDKRVHTIISDVMNQICR---------GEIEQI 150

Query: 168 QDEF-IDET-QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+  ++++ + K KT  L+  +C+ GAI++ A+   ++ L  F   LG+ +Q+ 
Sbjct: 151 RDQYNWDQGLRIYLRRIKRKTALLIAVSCQLGAIVSGATDELQKNLYYFAYFLGMSYQIM 210

Query: 225 DDLLD 229
           DD+LD
Sbjct: 211 DDILD 215


>gi|241760794|ref|ZP_04758885.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114]
 gi|241318691|gb|EER55243.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114]
          Length = 324

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIITILAGKAVGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYVQVIQYKTAKLFEAAAQVGAILGKASTEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|261401641|ref|ZP_05987766.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970]
 gi|313667728|ref|YP_004048012.1| octaprenyl-diphosphate synthase [Neisseria lactamica ST-640]
 gi|269208281|gb|EEZ74736.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970]
 gi|313005190|emb|CBN86623.1| octaprenyl-diphosphate synthase [Neisseria lactamica 020-06]
          Length = 324

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGRSVGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|325919582|ref|ZP_08181594.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC
           19865]
 gi|325549918|gb|EGD20760.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC
           19865]
          Length = 358

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 79  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIVEFIHTSTLLHDDV--VDESDLRRGRSTAN 136

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 137 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 190

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + A  + ++RL  +G  LG  FQ+ADD+L
Sbjct: 191 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAHVQQRLYDYGMQLGFAFQIADDVL 250

Query: 229 DCEED 233
           D   D
Sbjct: 251 DYAAD 255


>gi|297617504|ref|YP_003702663.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145341|gb|ADI02098.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 345

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV     L        + V  A+ECIH  SLIHDD+  +D   +RRG PT++ 
Sbjct: 37  GKMLRPRLVLLSRGLLGPIEDLTVDVAVAVECIHNASLIHDDI--IDAAVLRRGAPTINH 94

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---LD 166
            Y    A++ G+     AF +++      + N++  +M  L+  I  Q M  G++   L+
Sbjct: 95  LYGPKIAVLVGDHYFAAAFGLLT------RHNLK-HIMRELSDAI--QDMCKGEIYQDLN 145

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + + +I E   +     KT +L   AC  G +    S  E   +  FG  LG  +Q+ADD
Sbjct: 146 LFNPYITEDDYWTSIFGKTASLFSAACRCGVMAGGGSAREVYLMGKFGRELGYAYQVADD 205

Query: 227 LLD 229
           + D
Sbjct: 206 IND 208


>gi|257465194|ref|ZP_05629565.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202]
 gi|257450854|gb|EEV24897.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202]
          Length = 327

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLITVLAARALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      D++    ++S   N   +G +  Q++++ 
Sbjct: 105 AAFGNAASVLVGDYIYTRSFQMMTSV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A+AS+  +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEENYMRVIYNKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|145596562|ref|YP_001160859.1| polyprenyl synthetase [Salinispora tropica CNB-440]
 gi|145305899|gb|ABP56481.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
          Length = 356

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 74  GGKRFRPLLVALGAQFGDPTREQVVPAAVVVELTHLATLYHDDV--MDEAPVRRGAPSAN 131

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
            ++    AI+ G+ L   A +I +   T+    ++++    L H         GQ+ +  
Sbjct: 132 SRWTNSVAILVGDYLFARAADISADLGTEAV-RLQARTFARLVH---------GQIAETV 181

Query: 168 -QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                +D     + +   KTG+L+  A   G + + AS    + L  +GE +G+ FQL+D
Sbjct: 182 GPRPGVDPVAHHLHVIAEKTGSLIATAARFGGMFSGASPTHTQALAGYGEAIGVAFQLSD 241

Query: 226 DLLDCEED 233
           DLLD   +
Sbjct: 242 DLLDISSE 249


>gi|194467708|ref|ZP_03073695.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
 gi|194454744|gb|EDX43641.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
          Length = 326

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 28/197 (14%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK +R       A   N+NH TA      +++ +++E +H  +LIHDD+  +D+   RR
Sbjct: 45  GGKYLRPAFFLLFA---NINHQTAAEQEKLIKIASSLEVLHMATLIHDDI--IDDSPKRR 99

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGM 159
           G  +V   + + TA+  G+ L T  F+++    T    L  N R+           ++ +
Sbjct: 100 GAVSVQAAFGKDTAVYTGDFLFTIFFDLLVETMTGSPYLTRNART-----------MRKI 148

Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++  + + F +D++ +   + +  KT A+   A E GA   H  +      +  G+N
Sbjct: 149 LTGELGQMDNRFDLDQSLLDYYRNVNGKTAAIFSLAAEEGAYFGHGDRRTINLAKRIGQN 208

Query: 217 LGIIFQLADDLLDCEED 233
           +GI FQ+ DD+LD   D
Sbjct: 209 IGISFQILDDILDYSGD 225


>gi|328466279|gb|EGF37436.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes 1816]
          Length = 312

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+  +DN  +RRG+ T+
Sbjct: 35  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETI 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 93  KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 143

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 144 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 203

Query: 225 DDLLD 229
           DD+LD
Sbjct: 204 DDVLD 208


>gi|283457457|ref|YP_003362034.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
 gi|283133449|dbj|BAI64214.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
          Length = 353

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 20/221 (9%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           RI+  L + + QT  H+    +  LLSA      GGK++R  L    A++    +   + 
Sbjct: 44  RIEERLGEAIAQT-DHLADVASRHLLSA------GGKRVRPLLALLSAAVDGEINDEVIE 96

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E  H  +L HDD+  MD+   RRG  +  + +    AI+ G+ + + A  ++S  
Sbjct: 97  AAVVVELTHLATLYHDDV--MDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLVSEL 154

Query: 135 KTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
            T+    I+SQ    L L       G   GQ  D+ D +I       + + KTG+L+  A
Sbjct: 155 GTRPM-KIQSQTFERLVLGQLFETTGPREGQ--DLLDHYI------AVIEGKTGSLIAAA 205

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            E G++++ AS+     ++ +GE +G+ FQLADD++D   D
Sbjct: 206 GEYGSLLSGASEEVISMVKAYGELVGVAFQLADDVIDIVSD 246


>gi|47094453|ref|ZP_00232133.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes str. 4b H7858]
 gi|226224534|ref|YP_002758641.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes Clip81459]
 gi|254825575|ref|ZP_05230576.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           J1-194]
 gi|254852833|ref|ZP_05242181.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           R2-503]
 gi|254993471|ref|ZP_05275661.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes FSL J2-064]
 gi|255521040|ref|ZP_05388277.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes FSL J1-175]
 gi|300763760|ref|ZP_07073757.1| heptaprenyl diphosphate syntase component II [Listeria
           monocytogenes FSL N1-017]
 gi|47017168|gb|EAL08021.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes str. 4b H7858]
 gi|225876996|emb|CAS05705.1| Putative heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258606162|gb|EEW18770.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           R2-503]
 gi|293594818|gb|EFG02579.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           J1-194]
 gi|300515496|gb|EFK42546.1| heptaprenyl diphosphate syntase component II [Listeria
           monocytogenes FSL N1-017]
          Length = 321

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+  +DN  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|46908163|ref|YP_014552.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|254931899|ref|ZP_05265258.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
 gi|46881433|gb|AAT04729.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|293583451|gb|EFF95483.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
 gi|328472773|gb|EGF43622.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes 220]
          Length = 321

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+  +DN  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|21225056|ref|NP_630835.1| polyprenyl synthatase [Streptomyces coelicolor A3(2)]
 gi|4539167|emb|CAB39696.1| putative polyprenyl synthatase [Streptomyces coelicolor A3(2)]
          Length = 378

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 87  GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKAS------RSLIDGQAQDIS 198

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 199 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVD 258

Query: 226 DLL 228
           DLL
Sbjct: 259 DLL 261


>gi|258514531|ref|YP_003190753.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM
           771]
 gi|257778236|gb|ACV62130.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM
           771]
          Length = 323

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 17/222 (7%)

Query: 14  KRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHL 70
           K  + I DDL +++   +   Q  D LL+     LL  GGK++R          +N +  
Sbjct: 6   KLFNEIKDDLKIVEQELYQVVQTPDALLTETSVHLLNAGGKRLRPAFCLLGGKFYNYDIK 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L +  A+E IH  SL+HDD+  +D    RRG PTV  ++    ++  G+ L   +  +
Sbjct: 66  KLLPLAVALELIHMASLVHDDV--VDASMTRRGMPTVKAKWGNRISVHVGDYLFAKSLIL 123

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDE--TQVFMIQKMKTGA 187
           ISS K  L   + S   + ++          G++  I   F +++     F   K KT  
Sbjct: 124 ISSYKEPLITRVLSDTSVKMSE---------GEIQQISTSFNVNQYLKDYFYRIKRKTAL 174

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C+ GA+   A +     L  +G  +G+ FQ+ DD+LD
Sbjct: 175 LISASCQLGAVACGAPKEIYLPLNRYGHYIGMAFQITDDILD 216


>gi|261342632|ref|ZP_05970490.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC
           35316]
 gi|288315280|gb|EFC54218.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC
           35316]
          Length = 323

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+   +  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQCSGILGGCTDVQEKGLQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|149371556|ref|ZP_01890972.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49]
 gi|149355183|gb|EDM43743.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49]
          Length = 325

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 36/195 (18%)

Query: 50  GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R    FL+ +     NVN  T  R  + IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 45  GKQMRPMFVFLIAKMCDEGNVNERT-YRGASVIELIHTATLVHDDV--VDDSNRRRGFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---------NIGLQ 157
           ++  +    A++ G+ LL+                    L+LS+ H         ++ ++
Sbjct: 102 INALWKNKIAVLVGDYLLSKG------------------LLLSIDHGDFDLLKIISVAVR 143

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            M  G++L I+      I E   F I + KT  L+   C  GA   +AS+ + E +R FG
Sbjct: 144 EMSEGELLQIEKARRLDITEEIYFEIIRQKTATLIAACCAMGAKSVNASEGQVENMRAFG 203

Query: 215 ENLGIIFQLADDLLD 229
           E +G  FQ+ DDL D
Sbjct: 204 ELIGTAFQIKDDLFD 218


>gi|310643237|ref|YP_003947995.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Paenibacillus polymyxa SC2]
 gi|309248187|gb|ADO57754.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Paenibacillus polymyxa SC2]
          Length = 795

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 7/201 (3%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ++L+ A  Y+L G GK+IR  L      + + ++ L  + +  ++E +H  SLI DDLPS
Sbjct: 533 EQLIDAANYSLEGDGKRIRPILTWVMGVNEYGLDALAIVPLLRSLEYMHTASLIFDDLPS 592

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            DN   RRG+ T+H  ++  TA + G  L+  A   I    +  + N  + L L      
Sbjct: 593 QDNASTRRGRQTLHQVHNSATAELTGLYLIQKA---IGEQASLSQFNAETVLALIQYSAR 649

Query: 155 GLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             + M  GQ +D+  + + +   Q+ M+   KTG          A++A   ++E   L+ 
Sbjct: 650 KAEDMCMGQAMDLDSKGKALTLEQLNMMCFYKTGVAFEACLVMPAMLAQTEESEIAALQK 709

Query: 213 FGENLGIIFQLADDLLDCEED 233
           F  ++GI FQ+ DDLLD E D
Sbjct: 710 FAYHMGIAFQIKDDLLDVEGD 730


>gi|300711100|ref|YP_003736914.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3]
 gi|299124783|gb|ADJ15122.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3]
          Length = 347

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 26/213 (12%)

Query: 37  DRLLSAIRYAL-LGGKKIR-SFLVTECASLFNVNHLTA---------------LRVGAAI 79
           +RL  A RY L  GGK++R + L+    +L +V  L+                LR   +I
Sbjct: 34  ERLYEASRYLLDAGGKRLRPAVLLLTAEALCDVAPLSTDYREFPTLDGDTVDVLRAAVSI 93

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E I  ++LIH     MD+  +RRG P+VH +YD  TAI+AG+ L + AFEI+        
Sbjct: 94  ETIQSFTLIH--DDIMDDDDLRRGVPSVHREYDLETAILAGDTLYSKAFEIMLESGAHPG 151

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESG 196
            ++++   L+ T       +  GQ LD++    E + E++   + ++KT  L   A    
Sbjct: 152 RSLKALRTLAST----CTRICEGQSLDVEFERREDVSESEYLEMIELKTAVLYGSATSVP 207

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A +  A     E L  +G ++G  FQ+ DD+LD
Sbjct: 208 ADLLGADDRTVEALYRYGIDIGKAFQIQDDVLD 240


>gi|228914189|ref|ZP_04077805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228845393|gb|EEM90428.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 305

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV
Sbjct: 28  GGKRIRPVFVL-LAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATV 84

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166
           + ++ +  A+  G+ L   + E I+        NI   +   +L+H I    +  G++  
Sbjct: 85  NAKWGDRIAMYTGDYLFAKSLECIT--------NIEIPEAHQALSHTI--LEVCKGEIEQ 134

Query: 167 IQDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+D++  D+     ++  K KT  L+  +C+ GAI A A+ +   RL  +G  +G+ +Q+
Sbjct: 135 IKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANCDTVSRLFWYGYFVGMSYQI 194

Query: 224 ADDLLD---CEEDLPK 236
            DD+LD    EE L K
Sbjct: 195 IDDILDFVSTEEKLGK 210


>gi|15599765|ref|NP_253259.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1]
 gi|107099768|ref|ZP_01363686.1| hypothetical protein PaerPA_01000786 [Pseudomonas aeruginosa PACS2]
 gi|116052711|ref|YP_793028.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893664|ref|YP_002442533.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58]
 gi|254238683|ref|ZP_04932006.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719]
 gi|254244534|ref|ZP_04937856.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192]
 gi|296391383|ref|ZP_06880858.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAb1]
 gi|313107214|ref|ZP_07793413.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016]
 gi|9950815|gb|AAG07957.1|AE004870_8 octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1]
 gi|115587932|gb|ABJ13947.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126170614|gb|EAZ56125.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719]
 gi|126197912|gb|EAZ61975.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192]
 gi|218773892|emb|CAW29706.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58]
 gi|310879915|gb|EFQ38509.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016]
          Length = 322

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV                + A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L   +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 ALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +  A + + E LR FG+ LGI FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|152975037|ref|YP_001374554.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152023789|gb|ABS21559.1| Heptaprenyl diphosphate synthase component II [Bacillus cytotoxicus
           NVH 391-98]
          Length = 320

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A  F    L A++ V  A+E IH  SL+HDD+  +D   +RRG  TV
Sbjct: 43  GGKRIRPVFVL-LAGKFGEYKLDAIKHVAVALELIHMASLVHDDV--IDAALLRRGSATV 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  + +  A+  G+ L   + E I++ +        S  +L +           G++  I
Sbjct: 100 NANWGDRIAMYTGDYLFAKSLECITNLEVPEAHQALSYTILEVCK---------GEIEQI 150

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D+     ++  K KT  L+  +C+ GAI + AS++   RL  +G  +G+ +Q+ 
Sbjct: 151 KDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQII 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 211 DDILDFVSTEEKLGK 225


>gi|10801552|dbj|BAB16689.1| GGPP synthase [Eucommia ulmoides]
          Length = 127

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 3/127 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H+ + E  A++AG+ LL +AFE+I++  T +  +   +++  L  +IG 
Sbjct: 1   NDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVPADRIVRVIGELAKSIGS 60

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + +     +  I   KT AL+  +   GAI+  A+  E E+LR F
Sbjct: 61  EGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGATDPEVEKLRKF 120

Query: 214 GENLGII 220
              +G +
Sbjct: 121 ARCIGFL 127


>gi|85708095|ref|ZP_01039161.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1]
 gi|85689629|gb|EAQ29632.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1]
          Length = 336

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L         ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 55  GGKRLRPMLTLAGAALVGYEGTRHHKLAAAVEFIHTATLLHDDV--VDGSELRRGKAAAN 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +     ++ G+ L + AFE+++        ++R   +LS    +  +G +       Q
Sbjct: 113 IVFGNPATVLVGDFLFSRAFELMTE-----DGSLRVLKILSHASAVIAEGEVSQLTAQRQ 167

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E  +E  + +I      AL   A +  A++A  S  E+  L  +G NLG+ FQL DD +
Sbjct: 168 IETSEERYLHIIGAKTA-ALFAAASQISAVVAECSDEEERALEDYGRNLGVAFQLVDDAI 226

Query: 229 DCEED 233
           D + D
Sbjct: 227 DYDSD 231


>gi|320531898|ref|ZP_08032809.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135889|gb|EFW27926.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 368

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 40/250 (16%)

Query: 1   MNGGLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           M G LP    E   RI   L   +D L++  +      N         A  GGK++R  L
Sbjct: 1   MIGSLPLSAPELESRIIPALQTIEDRLMEVVTSADETINP---PTSHLAEAGGKRLRPVL 57

Query: 58  VTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
               A L +    T  ++   G A+E  H  +L HDD+  MD   +RRG P+    +   
Sbjct: 58  ALLTAQLGDPALATGEQIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWGNS 115

Query: 115 TAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-------- 164
            AI+ G+ L+  A ++++  SP+              + H    + +  GQ+        
Sbjct: 116 AAILTGDVLVARASQLVAALSPEA------------VMAHAKTFERLCMGQLHETLPRPS 163

Query: 165 -LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             D  D +I   QV      KTG+L+  +   GA++  A    ++ +  FGE +G+ FQL
Sbjct: 164 GTDPVDHYI---QVL---ADKTGSLIAVSARYGAMLTDAGVRTEQIVEEFGERIGVAFQL 217

Query: 224 ADDLLDCEED 233
           ADD++D   D
Sbjct: 218 ADDVIDLMSD 227


>gi|312795082|ref|YP_004028004.1| farnesyl pyrophosphate synthetase / Geranyltranstransferase /
           farnesyltransferase / Octaprenyl diphosphate synthase
           [Burkholderia rhizoxinica HKI 454]
 gi|312166857|emb|CBW73860.1| Farnesyl pyrophosphate synthetase (EC 2.5.1.1) /
           Geranyltranstransferase (EC 2.5.1.10) /
           Farnesyltransferase (EC 2.5.1.29) / Octaprenyl
           diphosphate synthase (EC 2.5.1.-) [Burkholderia
           rhizoxinica HKI 454]
          Length = 352

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A+           + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 73  GGKRLRPALLLLVANALGERSGQRHELAAVIEFIHTATLLHDDV--VDESQLRRGKQTAN 130

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ +      DN+R   +LS   N+  +G +  Q+L++ 
Sbjct: 131 ALFGNAASVLVGDFLYSRAFQMMVA-----CDNLRVMQILSDATNVIAEGEVL-QLLNMH 184

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +D+ +   + + KT  L   A + GA++A A    +     FG  +G  FQ+ DD L
Sbjct: 185 DPDVDQARYMQVIRYKTAKLFEAAAQLGAVIAGAPPALEAAAAEFGRTIGTAFQIMDDWL 244

Query: 229 D 229
           D
Sbjct: 245 D 245


>gi|298244906|ref|ZP_06968712.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM
           44963]
 gi|297552387|gb|EFH86252.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM
           44963]
          Length = 329

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L      L        L +  A E  H  +LIHDD+  +D    RRG PTV+ 
Sbjct: 48  GKRLRTALTLLAGKLNTYRFEKLLLLSVAFEMTHLATLIHDDI--VDESSTRRGNPTVNA 105

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            + +  AI+ G+        +I+  +    D++ S  + ++     L+ M  G +   ++
Sbjct: 106 LFGDKIAILLGDYYFAKTAGLIADIEDPRIDHLFSDTVATVCEGTILEMMTAGNIDLSKE 165

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + ++T      + KT  LM    + GAI++ A+  E E L  +G +LG  FQ+ DD+LD
Sbjct: 166 TYYEKT------RSKTACLMAACSKGGAIISGATPEEIELLYAYGMHLGTAFQIIDDILD 219

Query: 230 CEED 233
             +D
Sbjct: 220 YTQD 223


>gi|289767672|ref|ZP_06527050.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289697871|gb|EFD65300.1| polyprenyl synthetase [Streptomyces lividans TK24]
          Length = 354

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 63  GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 121 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKAS------RSLIDGQAQDIS 174

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 175 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVD 234

Query: 226 DLL 228
           DLL
Sbjct: 235 DLL 237


>gi|332312370|gb|EGJ25465.1| Trans-hexaprenyltranstransferase [Listeria monocytogenes str. Scott
           A]
          Length = 324

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+  +DN  +RRG+ T+
Sbjct: 47  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETI 104

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 155

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|160900919|ref|YP_001566501.1| polyprenyl synthetase [Delftia acidovorans SPH-1]
 gi|160366503|gb|ABX38116.1| Polyprenyl synthetase [Delftia acidovorans SPH-1]
          Length = 359

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+    +           + A +E IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 80  GGKRLRPALLLMVCNALGYEGRDRHVLAAVVELIHTATLLHDDV--VDESTLRRGRPTAN 137

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++         ++R   +LS   N+  +G +  Q+++  
Sbjct: 138 ETFGNPASVLVGDFLHSRSFQMMVE-----VGSMRVLKILSDATNVIAEGEVQ-QLINTH 191

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   + + GA++A A +  ++    +G+ LG  FQ+ DD+L
Sbjct: 192 DASLDEAGYLHVIRSKTAQLFEASAQLGAVLADAPREIEQACAIYGQALGTAFQIIDDVL 251

Query: 229 DCEED 233
           D   D
Sbjct: 252 DYTGD 256


>gi|146308698|ref|YP_001189163.1| polyprenyl synthetase [Pseudomonas mendocina ymp]
 gi|145576899|gb|ABP86431.1| Polyprenyl synthetase [Pseudomonas mendocina ymp]
          Length = 322

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV                + A IE +H  +L+HDD+  M +  +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLSGRALGYQADDLRLLAATIEFLHTATLLHDDVVDMSD--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  ++
Sbjct: 101 AQWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMKILSHATRVIAEGEVL--QLSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A++ ++E LR FG++LGI FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALAGANEAQREALRTFGDHLGIAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|226951590|ref|ZP_03822054.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) [Acinetobacter sp. ATCC 27244]
 gi|294651249|ref|ZP_06728577.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837665|gb|EEH70048.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) [Acinetobacter sp. ATCC 27244]
 gi|292822902|gb|EFF81777.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 347

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 24/193 (12%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L      L N+    A  + A IE +H  +L+HDD+  +D   +RRG+P
Sbjct: 68  GGKRMRPIMCLLAARACGLTNMQQ--AQHLAAVIEMLHTATLVHDDV--VDESNLRRGRP 123

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           T +  ++  TA++ G+ L+  AF+++   +  T LKD            + G   +  G+
Sbjct: 124 TANATWNNQTAVLVGDFLIARAFDLLVDLNNMTLLKD-----------FSTGTCEIAEGE 172

Query: 164 MLDIQDEFIDET--QVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +L +Q +   +T  ++++ I   KT  L   A E  AI+A  ++  +E LR F  + G  
Sbjct: 173 VLQLQSQHQPDTTEEIYLNIIHGKTSRLFELATEGAAILA-GTEEYREPLRRFAGHFGNA 231

Query: 221 FQLADDLLDCEED 233
           FQ+ DD+LD   D
Sbjct: 232 FQIIDDILDYTSD 244


>gi|256783790|ref|ZP_05522221.1| polyprenyl synthatase [Streptomyces lividans TK24]
          Length = 342

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 51  GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 109 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKAS------RSLIDGQAQDIS 162

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 163 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVD 222

Query: 226 DLL 228
           DLL
Sbjct: 223 DLL 225


>gi|297163084|gb|ADI12796.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
           BCW-1]
          Length = 337

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A         AL    A+E +H +SL+HDDL  MD    RR + TV  
Sbjct: 53  GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +   +AI+ G+ +L  A E++      L   + +    +       + ++ GQ+ D+  
Sbjct: 111 LWGPSSAILTGDAMLALAQEVL------LDTGLPTAAPAARLLARTTRHLIRGQVQDLSF 164

Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            Q   +   +   +   KTGAL+  +   GA++A A +   + L  +G+ +G+ FQL DD
Sbjct: 165 EQRSHVTVEECIDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224

Query: 227 LLDCEED 233
           +L    D
Sbjct: 225 VLGIWGD 231


>gi|152985492|ref|YP_001350541.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7]
 gi|150960650|gb|ABR82675.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7]
          Length = 322

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV                + A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L   +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 ALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +  A + + E LR FG+ LGI FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALCRAGEEQAEALRRFGDYLGIAFQLVDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYRGD 219


>gi|254168815|ref|ZP_04875656.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
 gi|197622252|gb|EDY34826.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
          Length = 350

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 34/216 (15%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y L GGK+IR+ L+     +    +   ++  +++E I  Y LIHDD+  MD   +RRGK
Sbjct: 44  YTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLIHDDI--MDESDLRRGK 101

Query: 105 PTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
            TVH                I++ E  AIIAG+    YA EI+SS  +     ++ + + 
Sbjct: 102 DTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGDLANAYAMEILSS--SDFPAELKVKAIH 159

Query: 149 SLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACES-GAIMAHAS 203
            L   I   G   GQ++DI     DEF +E  + ++ K KT         + G I+A   
Sbjct: 160 KLNEIIEYTGY--GQIIDIYSGALDEFKEE-DLLLLHKYKTARYTIEGPLALGMILAG-- 214

Query: 204 QNEKERLRCFGENLGIIFQLADDLL---DCEEDLPK 236
             E E +  +   +GI FQL DD+L     EE++ K
Sbjct: 215 -KEPEGIENYAIPVGIAFQLQDDILGLFGSEEEIGK 249


>gi|116250711|ref|YP_766549.1| octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255359|emb|CAK06434.1| putative octaprenyl-diphosphate synthase [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 338

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASASLFDYRGENHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSSAACVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A   ++ +  L+ +G NLG+ FQL DD L
Sbjct: 175 DDYLS------VIRAKTAALFAAAAEVGPIVAEVGRSGRNALKSYGMNLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|262371901|ref|ZP_06065180.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii
           SH205]
 gi|262311926|gb|EEY93011.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii
           SH205]
          Length = 325

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A     VN   A  + A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAAKACGLVNMQQAQHLAAIIEMLHTATLVHDDV--VDESNLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +  ++  TA++ G+ L+  +F+++      T LKD            + G   +  G++L
Sbjct: 104 NATWNNQTAVLVGDFLIARSFDLLVDLNNITLLKD-----------FSTGTCEIAEGEVL 152

Query: 166 DIQD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +Q     E  +ET + +I   KT  L   A E  AI+A  ++  +E LR F  + G  F
Sbjct: 153 QLQSQHQPETTEETYLRIIHG-KTSRLFELATEGAAILA-GTEEYREPLRRFAGHFGNAF 210

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 211 QIIDDILDYTSD 222


>gi|325277088|ref|ZP_08142742.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
 gi|324097770|gb|EGB95962.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
          Length = 322

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +L      Q++   T  I    +L  Q+  ++
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMQILSKATRVIAEGEVL--QLSRVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDAQREALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|118602394|ref|YP_903609.1| dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567333|gb|ABL02138.1| Dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 323

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 99/186 (53%), Gaps = 8/186 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+  CA            +   IE IH  +L+HDD+  +D    RRGK TV+
Sbjct: 44  GGKRLRPLLLLLCARATEYQGTHHYLMAVVIELIHTATLLHDDI--VDESITRRGKDTVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AFE++  P +     IR   +LS T N   +G +  Q+L+ +
Sbjct: 102 EVWGNAPSVLVGDFLYSRAFEMMIEPNSMYI--IR---ILSKTTNSIAEGEVL-QLLNCK 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + ET+ + + + KT  L   A + G +++   + ++  L+ +G +LG  FQ+ DD+L
Sbjct: 156 NTELTETEYYAVIERKTACLFQAATQIGGLLSGVDKAQESALKDYGLHLGNAFQIIDDVL 215

Query: 229 DCEEDL 234
           D E ++
Sbjct: 216 DYESNV 221


>gi|297343242|pdb|3N3D|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           F Lactobacillus Brevis Atcc 367
 gi|297343243|pdb|3N3D|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           F Lactobacillus Brevis Atcc 367
          Length = 335

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 12/221 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T L D LL+T        + ++L+ ++    GGK +R       ++  N      L+ GA
Sbjct: 19  TALQDYLLRTVQLDNQPIHHKILALLKS---GGKLLRPGYFYLFSTFGNAATPAQLQAGA 75

Query: 78  A-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A IE +H  +LIHDD+  +D+   RRG  T+ + Y +  AI AG+ + T  F+ +    T
Sbjct: 76  AAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTT 133

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
              D    Q  +   H I LQG L    L+ +++   +  +  I   KT  L   +C  G
Sbjct: 134 ---DRSLIQNHIDAMHRI-LQGELHQMDLNYREDITLDAYLNEIAG-KTAELFALSCYQG 188

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           A +A A Q+  +R R  G  +G  +Q+ DD+LD   D PK+
Sbjct: 189 AQLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYAGD-PKR 228


>gi|87122767|ref|ZP_01078640.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121]
 gi|86161932|gb|EAQ63224.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121]
          Length = 327

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 104/198 (52%), Gaps = 15/198 (7%)

Query: 39  LLSAIRYALL--GGKKIRSFLV----TECASLFNVNHL-TALRVGAAIECIHCYSLIHDD 91
           L+  I Y ++  GGK++R  LV      C +    N+    +++   IE IH  +L+HDD
Sbjct: 31  LIEQIGYYIISNGGKRLRPLLVLMAARACGNADASNYQDNMVKMATIIEFIHTATLLHDD 90

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D   +RRGK T + ++    +++ G+ L + AF+I+    +     ++   +L+ T
Sbjct: 91  V--VDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQIMVEVGS-----MQCMQILAET 143

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            NI  +G +  Q+++  D    E     + + KT  L   A   GAI+A+A++ +++ L 
Sbjct: 144 TNIISEGEVQ-QLINCGDPSTSEESYLKVIQYKTAKLFEGAALCGAIVANANKEQQQALA 202

Query: 212 CFGENLGIIFQLADDLLD 229
            +G  +G  FQL DD++D
Sbjct: 203 DYGTYVGTAFQLIDDVMD 220


>gi|262369367|ref|ZP_06062695.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046]
 gi|262315435|gb|EEY96474.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046]
          Length = 325

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A       L   R + A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAAKACGAEDLERQRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +  ++  TA++ G+ L++ AF+++      T LKD            + G   +  G++L
Sbjct: 104 NATWNNQTAVLVGDFLISRAFDLLVDLGDMTLLKD-----------FSTGTCEIAEGEVL 152

Query: 166 DIQDEFIDET--QVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            +Q +   ET  Q ++ I   KT  L   A E  AI++   Q  +E LR F  + G  FQ
Sbjct: 153 QLQAQHQPETTEQTYLDIIHGKTSRLFELATEGAAILSGTPQY-REPLRLFAGHFGNAFQ 211

Query: 223 LADDLLDCEED 233
           + DD+LD   D
Sbjct: 212 IIDDILDYTSD 222


>gi|238757559|ref|ZP_04618744.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236]
 gi|238704321|gb|EEP96853.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236]
          Length = 323

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALHYKGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRAFQMMTGLES-----LRVLTLMSAATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAAAQSAAVLAEASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|302148849|pdb|3NF2|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
           Streptomyces Coelicolor A3(2)
          Length = 352

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 53  GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 111 KVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKAS------RSLIDGQAQDIS 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 165 YEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVD 224

Query: 226 DLL 228
           DLL
Sbjct: 225 DLL 227


>gi|299065629|emb|CBJ36801.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CMR15]
          Length = 322

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPVILLLMANALGYRGQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        D++R   +L+   N+  +G +  Q+L++ 
Sbjct: 101 AAFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA+++ A    +     +G  +G  FQ+ DDLL
Sbjct: 155 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|312597572|pdb|3PKO|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Citrate
 gi|312597573|pdb|3PKO|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Citrate
          Length = 334

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 12/221 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T L D LL+T        + ++L+ ++    GGK +R       ++  N      L+ GA
Sbjct: 26  TALQDYLLRTVQLDNQPIHHKILALLKS---GGKLLRPGYFYLFSTFGNAATPAQLQAGA 82

Query: 78  A-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A IE +H  +LIHDD+  +D+   RRG  T+ + Y +  AI AG+ + T  F+ +    T
Sbjct: 83  AAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLKSTT 140

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
              D    Q  +   H I LQG L    L+ +++   +  +  I   KT  L   +C  G
Sbjct: 141 ---DRSLIQNHIDAMHRI-LQGELHQMDLNYREDITLDAYLNEIAG-KTAELFALSCYQG 195

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           A +A A Q+  +R R  G  +G  +Q+ DD+LD   D PK+
Sbjct: 196 AQLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYAGD-PKR 235


>gi|148260434|ref|YP_001234561.1| polyprenyl synthetase [Acidiphilium cryptum JF-5]
 gi|146402115|gb|ABQ30642.1| Polyprenyl synthetase [Acidiphilium cryptum JF-5]
          Length = 344

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        + + A +E IH  +L+HDD+  +D   +RRG  + +
Sbjct: 63  GGKRLRPLLTLAAARLCGYRGERHIHLAACVEFIHTATLLHDDV--VDESGLRRGLASAN 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L   AFE++    +   D +R  ++ + +  I    +L  Q+    
Sbjct: 121 AVFGNKASVLVGDFLFARAFELMVEDGSL--DVLR--ILCNASATIAEGEVL--QLTTQN 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D   D  + F + + KT AL   ACE G ++A         L C+G  LG+ FQL DD L
Sbjct: 175 DLSTDIPRYFKVIEGKTAALFAAACEVGGVVADRDSAVCGALACYGAALGMAFQLVDDAL 234

Query: 229 DCEED 233
           D   D
Sbjct: 235 DYAAD 239


>gi|156741272|ref|YP_001431401.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156232600|gb|ABU57383.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 338

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L      +   +   AL + AAI+ +H +SLIHDD+   D    RRG+PTV  
Sbjct: 51  GKLLRPRLCLLSCRVVGGDPRDALPLAAAIQLLHDFSLIHDDI--QDQSDTRRGRPTVWK 108

Query: 110 QYDEVTAIIAGNGLLTYA------FEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLG 161
            +     I  G+G+ T A        +   P   + D +R   + +L++           
Sbjct: 109 LWGLAQGINTGDGMFTIAHLALHRLSLTGVPPATVLDVLRRFDETILTICE--------- 159

Query: 162 GQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GQ LD+  E    IDE+    + + KT AL+  + E GA++  A +   + L  FG  LG
Sbjct: 160 GQFLDLSYEGNLQIDESAYLAMIERKTAALIAASAELGALVGGADEETIQALFDFGRALG 219

Query: 219 IIFQLADDLLDCEED 233
           + FQ+ DD+L    D
Sbjct: 220 LAFQIEDDVLGIWGD 234


>gi|163792420|ref|ZP_02186397.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
 gi|159182125|gb|EDP66634.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
          Length = 340

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        + + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 59  GGKRLRPMLTLATAGLCGYTGERHIGLAACVEFIHTATLLHDDV--VDESDLRRGQDTAN 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++         +++   +LS    I  +G +  Q++   
Sbjct: 117 AVWGNQASVLVGDFLFSRAFQLMVG-----DGSLKVLKILSDASAIIAEGEVH-QLITTN 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   A + G ++A   + E+  L  FG +LG+ FQL DD+L
Sbjct: 171 DIDTTEAAYLEVIRCKTAQLFAAAAQIGPVVAERPEAEEMALEGFGRDLGVAFQLVDDVL 230

Query: 229 D 229
           D
Sbjct: 231 D 231


>gi|227494517|ref|ZP_03924833.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis
           DSM 15436]
 gi|226832251|gb|EEH64634.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis
           DSM 15436]
          Length = 332

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 24/194 (12%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  LV  CA L + + + +  V     A+E  H  +L HDD+  MD+   RRG P
Sbjct: 45  GGKRMRPLLVLICAQLGSPSQVASQDVIDAATAVELTHLATLYHDDV--MDSAPQRRGVP 102

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
               Q+    AI+AG+ L   A  +++    +  D           H    + +  GQ+ 
Sbjct: 103 AAQHQWGNNRAILAGDVLFARASRLVARLGQRTIDY----------HAQTFERLCIGQL- 151

Query: 166 DIQDEFIDETQV----FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              + F  ET      F I+ +  KTG+L+  A   GA    A+    E +  +GE +G+
Sbjct: 152 --NETFGPETDFDPVEFYIKVLSDKTGSLINTAAVFGAWHGGATDEVAEAVGVYGERIGV 209

Query: 220 IFQLADDLLDCEED 233
            FQLADD++D   D
Sbjct: 210 AFQLADDVIDLTSD 223


>gi|328953238|ref|YP_004370572.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM
           11109]
 gi|328453562|gb|AEB09391.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM
           11109]
          Length = 325

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 19/224 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           +LQ +  RI+  L   L   A+H+      RL+S +   +L  GGK+IR  L    A + 
Sbjct: 11  RLQPDIDRINLALSGNL---ATHV------RLISEVWDHILISGGKRIRPLLFILAARMC 61

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                    +GA  E +H  +L+HDD+  +D    RRG+ + +  +     I+ G+ LL+
Sbjct: 62  GCRGDHLPDIGAIFEYLHAATLLHDDV--VDAATERRGQSSANTIWGNQAVILVGDFLLS 119

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A  I    +      + +Q    +     LQ +  G++   ++E+ D      +   KT
Sbjct: 120 KALSIAVETRQIRIIEVLAQTTTYMAEGEVLQLVNTGRLEMTEEEYFD------VITRKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             LM  AC+ GAI+       +  +  FG NLGI FQL DD+LD
Sbjct: 174 AKLMSAACQIGAILGGVDGRLEAAMADFGLNLGITFQLIDDILD 217


>gi|217977299|ref|YP_002361446.1| Polyprenyl synthetase [Methylocella silvestris BL2]
 gi|217502675|gb|ACK50084.1| Polyprenyl synthetase [Methylocella silvestris BL2]
          Length = 337

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L N      +++ A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 56  GGKRLRPMLTLATAGLCNYRGAGHVKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 113

Query: 109 IQYDEVTAIIAGNGLLTYAF----EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           + +    +++ G+ LL  AF    E+ S P   +         LS    +  +G +  Q+
Sbjct: 114 MLWGNEASVLVGDFLLGQAFKMMVEVGSLPCLDV---------LSAAAAVIAEGEVM-QL 163

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D    E     + + KT AL   A E G ++A   + E    R +G NLG+ FQL 
Sbjct: 164 SAAKDTETSEDDYLAVIRAKTAALFGAAAEVGPLLAGRPKAEIAACRGYGLNLGVAFQLI 223

Query: 225 DDLLD 229
           DD LD
Sbjct: 224 DDALD 228


>gi|15790228|ref|NP_280052.1| IdsA [Halobacterium sp. NRC-1]
 gi|169235957|ref|YP_001689157.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
           dimethylallyltransferase / geranyltranstransferase /
           farnesytranstransferase) [Halobacterium salinarum R1]
 gi|10580688|gb|AAG19532.1| geranylgeranyl diphosphate synthase [Halobacterium sp. NRC-1]
 gi|167727023|emb|CAP13809.1| putative trifunctional short-chain (E)-prenyl diphosphate synthase
           (probable dimethylallyltransferase / probable
           geranyltranstransferase / probable
           farnesytranstransferase) [Halobacterium salinarum R1]
          Length = 347

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 34/243 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASL 64
           + ++E  ++++  +DD        +     +RL  A RY L  GGK++R + L+    +L
Sbjct: 12  AAVRERRQQVNDAIDD-------DLPVAEPERLYEASRYILEAGGKRLRPAVLLLTAEAL 64

Query: 65  FNVN--------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
            + +              H+  +    +IE I  ++LIH     MD+  +RRG P VH +
Sbjct: 65  ADTSDTPPYREFPDCIGGHVDVMSAAVSIEVIQSFTLIH--DDIMDDDDLRRGSPAVHRE 122

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--- 167
           YD  TAI+AG+ L + AFEI+       +  +R+   L+ T       +  GQ +DI   
Sbjct: 123 YDTETAILAGDTLYSKAFEIMLETGAPPERGLRAMRTLAET----CTHICEGQAMDIDFE 178

Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            + + + +  + M++ +KT  L   A     ++  A +   E L  +G  +G  FQ+ DD
Sbjct: 179 TRGDVVTDEYLEMVE-LKTAVLYAAAATLPGLLLSADEETVEALYNYGLRVGQAFQIQDD 237

Query: 227 LLD 229
           +LD
Sbjct: 238 VLD 240


>gi|253702068|ref|YP_003023257.1| trans-hexaprenyltranstransferase [Geobacter sp. M21]
 gi|251776918|gb|ACT19499.1| Trans-hexaprenyltranstransferase [Geobacter sp. M21]
          Length = 322

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   + L   +   ++ + + +E IH  +L+HDD+  +DN  +RRG  + +
Sbjct: 41  GGKRIRPALVLLASRLCGYDGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++ +       ++R   +L+    I  +G +  Q++   
Sbjct: 99  TLWGNEASVLVGDFLFSKSFSLMVT-----DGDLRILKVLADATTIIAEGEVL-QLVCTC 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I   +   + + KT  L+  ACE GAI+  A    ++ L  +G +LGI FQL DD L
Sbjct: 153 DLDITVERYIEVVRSKTAILLSAACEVGAILGEADPEHRQALADYGMDLGIAFQLMDDTL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|217967661|ref|YP_002353167.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336760|gb|ACK42553.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 343

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 17/237 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL-LSAIRYALLGGKKIRSFLVTECAS 63
           + +KLQEN  +  + +  + L TA HM     D   L+ IR     GK++R         
Sbjct: 13  IENKLQENWNKFSSNIS-IHLITAYHMGWVGEDLTPLANIR----RGKRLRPLFCVLVNQ 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   AL +G+AIE +H +SL+HDD+   D    R G+ TV   + E  AI  G+ L
Sbjct: 68  TLGGFLDDALEIGSAIEFLHNFSLVHDDIQDRDEK--RHGRWTVWKIWGEAQAINVGDLL 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
               F+++++ K+ +   + S+ +  LT  I  + ++ GQ LDI  E    I   +  M+
Sbjct: 126 FNMVFQVLTNLKSPV---LLSKSLKELTETI--RELIEGQYLDISFEKRKDISLKEYLMM 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
              KT  L   +   GA  A   ++  +  +  G + G+ FQ+ADD +    D P+K
Sbjct: 181 IDKKTAKLFSTSFYLGAFSATYKEDLSKIFQEIGRDFGLFFQIADDAIGIWGD-PEK 236


>gi|332140074|ref|YP_004425812.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|332143128|ref|YP_004428866.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550096|gb|AEA96814.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327553150|gb|AEA99868.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 324

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    +++     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLSARAMGIDNNEHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ S K      +R   +LS   N   +G +  Q+++  
Sbjct: 101 AIFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMEILSEATNQIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E + F +   KT  L   A +  A++   +++ +  ++ +G++LG  FQLADD+L
Sbjct: 155 DAGTTEARYFDVIYGKTARLFEAATQLAAVLTEQNEHIERAMQEYGKHLGTAFQLADDIL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYMAD 219


>gi|294626299|ref|ZP_06704902.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666655|ref|ZP_06731892.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292599445|gb|EFF43579.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603561|gb|EFF46975.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 332

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + AS+  +++L  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGASEQVQQQLYDYGMQLGFAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|302553460|ref|ZP_07305802.1| heptaprenyl diphosphate synthase component II [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471078|gb|EFL34171.1| heptaprenyl diphosphate synthase component II [Streptomyces
           viridochromogenes DSM 40736]
          Length = 336

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVASAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
            ++    A++ G+ L   A   ++    +    +R Q           + ++ GQ+L+  
Sbjct: 111 TRWGNSVAVLTGDFLFARASHTLADLGPE---AVRVQAE-------AFERLVTGQILETA 160

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             QD          +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+ FQLAD
Sbjct: 161 GPQDGRDPVEHYLDVLAGKTGSLVAVSCRFGAMMSGADETTVDVLTQYGERLGVAFQLAD 220

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 221 DVLDIASD 228


>gi|300742151|ref|ZP_07072172.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Rothia dentocariosa M567]
 gi|300381336|gb|EFJ77898.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Rothia dentocariosa M567]
          Length = 353

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 13/202 (6%)

Query: 35  HNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + D+L   A R+ LL GGK++R  L    A++    +   +     +E  H  +L HDD+
Sbjct: 55  YTDKLADVAARHLLLAGGKRVRPLLTLLAAAVDGQINDDVIEAAVVVELTHLATLYHDDV 114

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLT 151
             MD+   RRG  T    +    AI+ G+ + + A  ++S   T+ +K   ++   L L 
Sbjct: 115 --MDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVSDLGTRPMKIQAQTFERLVLG 172

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
                 G+   Q  DI D +I       + + KTG+L+  A E G+++A AS+   + L 
Sbjct: 173 QLYETTGVRENQ--DILDHYIS------VIEGKTGSLIAAAGEYGSLLAGASEEVIQMLA 224

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +GE +G+ FQLADD++D   D
Sbjct: 225 TYGELVGVAFQLADDVIDIVSD 246


>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
 gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
          Length = 363

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++RY++L GGK++R  L      L       A+ V  A+E IH  SLIHDD+P MD+
Sbjct: 95  LSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDD 154

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIG 155
             +RRG+P+ H+ + E TA++AG+ LL  AFE ++  S    +  +   + ++ L    G
Sbjct: 155 DALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAG 214

Query: 156 LQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERL 210
           + G+  GQ+ D+  E      V +     I   KT  L+  A  SGA++      E ER+
Sbjct: 215 VGGIAAGQVADMASEGAPSGSVSLGALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERV 274

Query: 211 RCFGENLGIIFQLADDLLDC 230
           R +   LG++ Q+ DD+LD 
Sbjct: 275 RRYAHFLGLLGQVVDDVLDV 294


>gi|296116309|ref|ZP_06834925.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977128|gb|EFG83890.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 14/190 (7%)

Query: 49  GGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  L    A L     +  H   + + A +E IH  +L+HDD+  +D   +RRG 
Sbjct: 49  GGKRLRPLLTLASARLCGYEPDATHQRHVALAACVEFIHTATLLHDDV--VDESTLRRGL 106

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            + +  +    +++ G+ L   +F++++   +    NI S    ++     LQ       
Sbjct: 107 ASANAIFGNKASVLVGDFLFARSFQLMTDDGSLKVMNILSSASATIAEGEVLQ------- 159

Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +  Q++     + ++ +   KT AL   AC  GA++A      +E L  +G NLG+ FQL
Sbjct: 160 MSTQNDLSTSIEKYLEVIHGKTAALFAAACRVGAVVADQPLKVEEALDSYGTNLGMAFQL 219

Query: 224 ADDLLDCEED 233
            DD LD   D
Sbjct: 220 VDDALDYAAD 229


>gi|145608148|ref|XP_360800.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145015645|gb|EDK00135.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 364

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 89/166 (53%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++ G+ LL  A    S 
Sbjct: 106 RLAEITELIHTASLLHDDV--IDHSESRRGSPSANLEFGNKMAVLGGDFLLGRA----SV 159

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQK--M 183
              +L+D   ++L+ ++  N     ++ G+ + +++   DE++         + +QK  +
Sbjct: 160 ALARLRDAEVTELLATVIAN-----LVEGEFMQLKNTSRDESRPVWSEDALTYYLQKTYL 214

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++  A     +    FG+NLG+ FQL DD+LD
Sbjct: 215 KTASLISKSCRASALLGGADAQTVDAAYAFGKNLGLAFQLVDDMLD 260


>gi|93006580|ref|YP_581017.1| trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5]
 gi|92394258|gb|ABE75533.1| Trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5]
          Length = 344

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +   CA + N      A+ + A  E +H  +L+HDD+  +D    RRGKPT 
Sbjct: 62  GGKRMRPLITLLCARMLNDEPSKQAMHLAAITEMLHTATLVHDDV--IDESGQRRGKPTA 119

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +D  TA++ G+ L+  AF ++   ++         L L    + G   +  G++L +
Sbjct: 120 NATWDNATAVLVGDYLIARAFNLLVGFQS---------LPLLQVFSDGTCDIAEGEVLQL 170

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q +      E     I   KT  L   A +  AI+   +Q+  + L  FG++ G  FQ+ 
Sbjct: 171 QHQHNPEATEQDYLNIIDGKTSRLFMMATQGAAILQGQTQH-LQALANFGQHFGNAFQIV 229

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 230 DDVLDYSGD 238


>gi|302559082|ref|ZP_07311424.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
 gi|302476700|gb|EFL39793.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
          Length = 336

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLSAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVASAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L   
Sbjct: 111 ARWGNSVAVLTGDFLFARASHILADLGPE---AVRVQAE-------AFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +C  GA+M+ A     + L  +GE LG+
Sbjct: 161 GPQDGRDPVDHYLD------VLGGKTGSLVAVSCRFGAMMSGADDTVVDVLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|239995268|ref|ZP_04715792.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii ATCC
           27126]
          Length = 324

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    +++     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLSARAMGIDNNDHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ S K      +R   +LS   N   +G +  Q+++  
Sbjct: 101 AIFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMEILSEATNQIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E + F +   KT  L   A +  A++   +++ +  ++ +G++LG  FQLADD+L
Sbjct: 155 DPSTTEARYFDVIYGKTARLFEAATQLAAVLTDQNEHIEHAMQEYGKHLGTAFQLADDIL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYMAD 219


>gi|281207569|gb|EFA81752.1| trans-prenyltransferase [Polysphondylium pallidum PN500]
          Length = 529

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 24/201 (11%)

Query: 42  AIRYALLGGKKIRS---FLVTECASLFNVNHL----------TALRVGAAIECIHCYSLI 88
           A  Y  L GK+IR     L+    S+ N  +             +R+   +E IH  SL+
Sbjct: 236 AAYYFDLKGKRIRPTILLLLARALSIANSANPANQSAIQPSSVQMRLAEIVEMIHTASLV 295

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D+   RR  P+++  Y    AI+ G+ LL+ A  ++S+ K      + S ++ 
Sbjct: 296 HDDV--IDDADTRRDVPSINHTYSNKLAILCGDFLLSRASVLLSTLKNHEVTELMSTVIS 353

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            L     +Q    G   DI   +I +T       +KT +L+  +C S AI++ + +   +
Sbjct: 354 DLVEGEFMQIKASGSSFDI---YIRKTY------LKTASLIANSCRSTAILSGSDRQVID 404

Query: 209 RLRCFGENLGIIFQLADDLLD 229
               FG+NLG+ FQ+ DDLLD
Sbjct: 405 IATDFGKNLGLAFQIVDDLLD 425


>gi|59710884|ref|YP_203660.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114]
 gi|59478985|gb|AAW84772.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114]
          Length = 323

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T +F++++S  +     I+   ++S   N+  +G +  Q+++  
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A Q  +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|20092943|ref|NP_619018.1| polyprenyl synthetase [Methanosarcina acetivorans C2A]
 gi|19918255|gb|AAM07498.1| polyprenyl synthetase [Methanosarcina acetivorans C2A]
          Length = 295

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 18/186 (9%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK+IR  ++   + + + ++  +L    A+E +H  SLIHDDL  +D G IRR  P+ 
Sbjct: 48  FGGKRIRPIILLLASEICSGSYSRSLDAALAVEMMHSASLIHDDL--LDQGLIRRNLPSA 105

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQML 165
             ++    A++ G+ L+  +   IS P  +            +  + G  GM    G++L
Sbjct: 106 PEKFGPSRALLCGDYLIAKSIAFIS-PYGE-----------KVIRDFGKAGMDMAEGEVL 153

Query: 166 DIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D++  D+   E   F     KT +L   +   GA    A +   ER   FG +LG  +Q+
Sbjct: 154 DLRLDDDKFGEDDYFKCIYKKTASLFAISASIGAYTGGADEALAERFSFFGNSLGTAYQI 213

Query: 224 ADDLLD 229
            DD+L+
Sbjct: 214 VDDILE 219


>gi|311112076|ref|YP_003983298.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931]
 gi|310943570|gb|ADP39864.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931]
          Length = 370

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 13/202 (6%)

Query: 35  HNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + D+L   A R+ LL GGK++R  L    A++    +   +     +E  H  +L HDD+
Sbjct: 72  YTDKLADVAARHLLLAGGKRVRPLLTLLAAAVDGQINDDVIEAAVVVELTHLATLYHDDV 131

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLT 151
             MD+   RRG  T    +    AI+ G+ + + A  ++S   T+ +K   ++   L L 
Sbjct: 132 --MDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLVSDLGTRPMKIQAQTFERLVLG 189

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
                 G+   Q  DI D +I       + + KTG+L+  A E G+++A AS+   + L 
Sbjct: 190 QLYETTGVRENQ--DILDHYI------AVIEGKTGSLIAAAGEYGSLLAGASEEVIQMLA 241

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +GE +G+ FQLADD++D   D
Sbjct: 242 TYGELVGVAFQLADDVIDIVSD 263


>gi|295396390|ref|ZP_06806553.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294970759|gb|EFG46671.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 345

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 32/228 (14%)

Query: 14  KRIDTILDDLLLQTASHM-QTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           + ++T+LD    QT++   +T H+  L+ A      GGK++R  LV  C+ L        
Sbjct: 35  QHVETVLDAAASQTSAFADETSHH--LMRA------GGKRVRPMLVLLCSQLGGGVSPRV 86

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E +H  SL HDD+  MD    RRG  + H ++    AI+ G+ L   A     
Sbjct: 87  HTAAAAVELVHLASLYHDDV--MDEAPKRRGALSAHEKWGNNVAILTGDLLFARA----- 139

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-------VFMIQKMKT 185
              +QL   + ++ M         + ++ GQ+     EF+  T+          +   KT
Sbjct: 140 ---SQLSLEVGAEAMRVQAET--FERLVLGQL----HEFVGTTESDDPIEHYLSVLADKT 190

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           G+L+  +C+ G I +         ++ +GE +G+ FQLADD++D   D
Sbjct: 191 GSLISASCQFGVIASDGPAELLPVVKEYGEAVGVAFQLADDVIDLTVD 238


>gi|197333941|ref|YP_002155036.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11]
 gi|197315431|gb|ACH64878.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11]
          Length = 323

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T +F++++S  +     I+   ++S   N+  +G +  Q+++  
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A Q  +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|48477920|ref|YP_023626.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM
           9790]
 gi|48430568|gb|AAT43433.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM
           9790]
          Length = 345

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 20/199 (10%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           + + + GGK++R  ++    SLFN      ++   +IE    Y LIHDD+  MD   +RR
Sbjct: 43  MEFTMNGGKRLRPIMMITGYSLFNDIDDNIIKASISIELAQSYLLIHDDI--MDQSDMRR 100

Query: 103 GKPTVHIQYDEV---------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           G+P+ H   +            AI+AG+ + +++ E + +    +K+ I +    S    
Sbjct: 101 GRPSFHRSVETRLNDPRNSMNIAIVAGDLIDSFSHEALLTSGFDIKNLISADYEFSKV-- 158

Query: 154 IGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             ++    GQ++DI     DEF  E+++  +  MKT             M   ++ + + 
Sbjct: 159 --IEDTGKGQLIDIFSSLDDEF-SESRLMKLHYMKTARYTIEGPLVMGAMLAGNKKDIDY 215

Query: 210 LRCFGENLGIIFQLADDLL 228
           LR +G+N+GI FQ+ DD+L
Sbjct: 216 LRIYGKNIGIAFQIKDDIL 234


>gi|307352924|ref|YP_003893975.1| polyprenyl synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307156157|gb|ADN35537.1| Polyprenyl synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 321

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 17/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   L++N++ IDT L+ +       +  + +  LL A      GGK++R  +    A++
Sbjct: 3   LEEYLEKNAELIDTRLESMYGSLPGELD-KASAHLLCA------GGKRLRPSVTMLAANI 55

Query: 65  FNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                  ++   A A+E  H ++L+HDD+  MD    RRG PTVH ++DE TAI+AG+ L
Sbjct: 56  VEKGSSDSVIPAALALEVTHTFTLVHDDI--MDGDVARRGVPTVHTKWDEPTAILAGDVL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              AFE+I+         + +  +L+ T       +  GQ  D+  E  D+   +   +M
Sbjct: 114 YAEAFELITMADADPVAKVEAVAILART----CLEICRGQHEDMSFEKRDDVDPYEYLEM 169

Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTG L   A   G I+A     +   L  +G   G+ FQ+ DD++D   D  K
Sbjct: 170 VGQKTGKLYAAAAAIGGILAGGDARQVGALHDWGYLSGVAFQIQDDVIDLMADSEK 225


>gi|302390267|ref|YP_003826088.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200895|gb|ADL08465.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 323

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A   N ++     +  A+E +H  +LIHDD+  +D+  +RRG  TV 
Sbjct: 43  GGKRIRPALVYLSARFGNYDYEKIKPLAVAVELVHTATLIHDDI--VDDSPLRRGISTVQ 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
               +  A+ AG+ +L   F+I +      +  ++ S L       +  +     +  DI
Sbjct: 101 AAIGKDAAVYAGDYVLARTFKILVDHGDFDILKSVSSVLYRVCEGEVRQKR----EAFDI 156

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              F+D  +     + KT  L   +CE GA  A A       L+ +G  LG+ FQ+ DD+
Sbjct: 157 TISFLDYARRI---RKKTALLFALSCELGARGAKADPRTISALKKYGILLGMAFQVMDDI 213

Query: 228 LDCEED 233
           LD  ED
Sbjct: 214 LDLTED 219


>gi|301166557|emb|CBW26133.1| geranyltranstransferase [Bacteriovorax marinus SJ]
          Length = 311

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 93/160 (58%), Gaps = 11/160 (6%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + +A+E  H Y+L+HDDLPSMD+   RRGKP  HI+++E  A++AG+GL T +F +++  
Sbjct: 69  LASAVEVHHAYTLLHDDLPSMDDDDTRRGKPATHIKFNEWKALLAGDGLQTASFALLA-- 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
             +        ++   +  +G +G++ GQ LD+ +E    IDE  + +  + KT  L+  
Sbjct: 127 --KYGHKNLGLILKFFSWALGPKGLIQGQYLDLSEEMTKGIDE--LILTHQYKTARLIQT 182

Query: 192 ACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLD 229
           +   G   + A+ + +   + F  G ++G++FQL DDL +
Sbjct: 183 SILLGYWSSSATTDYRTSKQLFRLGHSVGVVFQLLDDLTE 222


>gi|227873691|ref|ZP_03991924.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268]
 gi|227840459|gb|EEJ50856.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268]
          Length = 161

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 12/137 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  +    Q+  + ++ IL   L +     +T      + A+ Y+L+ GGK+IR  L+ E
Sbjct: 26  NHSVEEGFQKRREEVEAILTTFLPEEKGPAKTG-----IEAMNYSLMVGGKRIRPILLRE 80

Query: 61  CASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              LF       L +        A+E IH +SL HDDLP+MDN   RRGK     ++ E 
Sbjct: 81  AFLLFAGEERQKLFLPLTEAFMLAMEMIHSFSLCHDDLPAMDNDKYRRGKEATWYRFTEA 140

Query: 115 TAIIAGNGLLTYAFEII 131
             I+AG+ L  YAF+ +
Sbjct: 141 QGILAGDSLSLYAFQWV 157


>gi|196230032|ref|ZP_03128895.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
 gi|196225629|gb|EDY20136.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
          Length = 330

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 16/191 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L             + L +   +E IH  +L+HDD+  +D    RRG+PT + 
Sbjct: 48  GKRLRPALALLAGGATGNICPSHLDLAVILELIHAATLVHDDI--LDGADKRRGQPTANA 105

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++    +++ G+ L  +A ++ +S P  ++   I         H      +  G+++  Q
Sbjct: 106 KWGNAISVLLGDCLFAHALKLSTSFPNGEISRRI--------AH--AASEVCSGEIIQTQ 155

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             F   +     + I +MKT AL   ACE GA++  A+    + LR FG  LG  +Q+ D
Sbjct: 156 RRFDLKLSVPDYYKIIEMKTAALFAAACELGALINEAAPEVIDALRIFGLQLGTAYQIYD 215

Query: 226 DLLDCEEDLPK 236
           D+LD   D  K
Sbjct: 216 DVLDLAGDEAK 226


>gi|257092398|ref|YP_003166039.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257044922|gb|ACV34110.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 320

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +        + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 41  GGKRLRPALVLLAAGALDYRGTHHHELAAVIEFIHTATLLHDDV--VDGSDLRRGRDTAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ +      D++R   +LS   N+  +G +  Q+++  
Sbjct: 99  AIFGNSASVLVGDFLYSRAFQMMVAV-----DDMRVMRVLSDATNVIAEGEVL-QLMNCH 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   A + GAI+   S   ++ +  +G +LG  FQL DD+L
Sbjct: 153 DADVDEAGYLQVIRYKTAKLFEAAAQLGAIIGGGSAAAEQGMATYGIHLGTAFQLIDDVL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|261365500|ref|ZP_05978383.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996]
 gi|288566037|gb|EFC87597.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996]
          Length = 324

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 111/221 (50%), Gaps = 15/221 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L E+  R++ +++  + Q+   + +Q    ++SA      GGK++R  +          +
Sbjct: 12  LPEDLSRVNEVINKAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKSVGYD 64

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L T AF
Sbjct: 65  GDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLYTRAF 122

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + KT  L
Sbjct: 123 QLMVDSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEAQYVQVIQYKTAKL 176

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              A + GAI+ +A    ++ L+ +G  +G  FQ+ DD+LD
Sbjct: 177 FEAAAQVGAILGNAPPEHEQALKDYGMYVGTAFQIIDDVLD 217


>gi|115378176|ref|ZP_01465349.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821415|ref|YP_003953773.1| polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115364808|gb|EAU63870.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394487|gb|ADO71946.1| Polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 332

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 18/200 (9%)

Query: 36  NDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            D L+ A R+  LG   K+ R  LV+       ++    + V  + E IH  SL+HDD+ 
Sbjct: 33  GDTLMEAARHLCLGSGSKRARPMLVSLFGDAVGLSSEHLVDVAVSAELIHSASLLHDDV- 91

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D G  RRG+PTV+ ++  + A+++G+ +L+     ++    QL + + S+  LS+   
Sbjct: 92  -VDAGMFRRGRPTVNARWGNIVAVMSGDLILSTTLLRLA----QLDERL-SRSALSVVSE 145

Query: 154 IGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                M    + +++   + E    ++  I + KTG+L  +   + A +A+  +  K R 
Sbjct: 146 -----MTRAAITEVEARGVMELPLPRLRYIAEGKTGSLFGWCGHAAATLANQPEAAK-RF 199

Query: 211 RCFGENLGIIFQLADDLLDC 230
             FG +LG+ FQ+ADD+ D 
Sbjct: 200 DGFGRHLGVAFQIADDIRDV 219


>gi|320095563|ref|ZP_08027226.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977471|gb|EFW09151.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 337

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 18/187 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  L   CA L         RV     A+E  H  SL HDD+  MD+   RRG P
Sbjct: 50  GGKRLRPLLTLVCAQLGRPELALGERVITGATAVELTHLASLYHDDV--MDSAPTRRGVP 107

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +    +    AI+AG+ L   A  ++++   ++             H +  + +  GQ+ 
Sbjct: 108 SAQRLWGNNRAILAGDVLFARASALVAALGPEMVTR----------HAVTFERLCTGQLN 157

Query: 166 DIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +       E  V F ++ +  KTG+L+  A   GA+++ A     + +  FGE +G+ FQ
Sbjct: 158 ETFGPAPGEDPVEFYLRVLADKTGSLVSSAAAFGALLSDAGAFVGDVVAEFGERVGVAFQ 217

Query: 223 LADDLLD 229
           +ADD+LD
Sbjct: 218 IADDVLD 224


>gi|239613774|gb|EEQ90761.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
           ER-3]
 gi|327350044|gb|EGE78901.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 520

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 262 RLAEITELIHTASLLHDDV--IDNAVTRRSAVSANLEFGNKMAVLAGDFLLGRASVALA- 318

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187
              +L+D    +L+ ++  N+ ++G    +   +  ++   F ++T  + +QK  +K+ +
Sbjct: 319 ---RLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 374

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 375 LISKSCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLD 416


>gi|219669380|ref|YP_002459815.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539640|gb|ACL21379.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 322

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 8/190 (4%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           SA++    GGK++R          +       L V  A+E IH  +L+HDD+  +D    
Sbjct: 35  SAVQLLEAGGKRLRPAFTLLAGKFYGYPIDRLLPVAMALELIHMATLVHDDV--VDASMT 92

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+PTV  ++  V +I  G+    Y          Q+     S+++  ++  +  QG +
Sbjct: 93  RRGRPTVKAKWGNVVSIATGD----YLLAKALELLAQINHPEVSKILAEVSVEMS-QGEI 147

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             Q+    D   +  Q +   K KT  L+  +C+ GA+++ A + E   L  +G  LG+ 
Sbjct: 148 Q-QIKASNDVNQNLKQYYYRIKRKTAMLISASCKLGALISAAPRREVWALGAYGHALGMA 206

Query: 221 FQLADDLLDC 230
           FQ+ DD+LD 
Sbjct: 207 FQIVDDVLDV 216


>gi|159041215|ref|YP_001540467.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167]
 gi|157920050|gb|ABW01477.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167]
          Length = 340

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 29/207 (14%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +V E A     +  +AL   A +E IH YSLI+DD+  +D   +RR  PTV 
Sbjct: 43  GGKRIRPLMVIESALACGGSLESALPYAAIVELIHNYSLIYDDI--IDEADLRRNMPTVR 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +Y +  AI+ G     +  E I       ++      +++ T    ++ +  G+ LDI 
Sbjct: 101 RKYGDYAAILVG----IWYREAIEEAVLDTRNPSEVARVVAET----IKAIDEGERLDIL 152

Query: 169 DEFIDETQVFMIQ-------------------KMKTGALMCFACESGAIMAHASQNEKER 209
            E+      + I+                    +KT AL   +   G   A     + E 
Sbjct: 153 MEYSGRRDPYFIENRLVREITPALRDLYIRMISLKTAALFKTSMWLGGYSAKCGNEQLEA 212

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           L  FG N+G+ FQ+ DD+LD   DL K
Sbjct: 213 LSNFGYNVGVAFQIIDDVLDIFGDLRK 239


>gi|119964240|ref|YP_948800.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Arthrobacter aurescens TC1]
 gi|119951099|gb|ABM10010.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Arthrobacter aurescens TC1]
          Length = 367

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L   CA L + +    ++    +E  H  +L HDD+  MD+   RRG PT H
Sbjct: 85  GGKRIRPLLTLLCAHLGDASRPEVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 142

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +    AI+ G+ +   A  ++S   ++ L    R+   L L       G L   +   
Sbjct: 143 EVWGNSVAILTGDLIFARASILVSELGSRALGIQARTFERLCL-------GQLHETVGPR 195

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +DE   E  + +I   KTG+L+  + + GAI A A ++ ++ L  +GE +G+ FQLADD+
Sbjct: 196 EDEDPVEHYLSVIAD-KTGSLVAASGQLGAIFAGADESYEDLLVEYGEKVGVAFQLADDV 254

Query: 228 LDC 230
           +D 
Sbjct: 255 IDV 257


>gi|147669014|ref|YP_001213832.1| polyprenyl synthetase [Dehalococcoides sp. BAV1]
 gi|289432282|ref|YP_003462155.1| trans-hexaprenyltranstransferase [Dehalococcoides sp. GT]
 gi|146269962|gb|ABQ16954.1| Polyprenyl synthetase [Dehalococcoides sp. BAV1]
 gi|288946002|gb|ADC73699.1| Trans-hexaprenyltranstransferase [Dehalococcoides sp. GT]
          Length = 324

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 14/188 (7%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y L+GGK +R  L    A  F       L +  + E +H  +L+HDD  ++D    RRG+
Sbjct: 42  YILVGGKVLRPALSMLSAMCFGAGIKKVLPLATSSEMLHIATLVHDD--AIDKADTRRGR 99

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            TV+  +    AI+ G+ L        ++       N+    + S T    LQ +  G++
Sbjct: 100 RTVNAVWGLEKAILLGDFLFA-----HAAETAAETGNMGIVTLFSQT----LQIIASGEL 150

Query: 165 LDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                 F  D++    ++++  KT AL   A + GAI+A AS +++E +R +G NLG+ F
Sbjct: 151 KQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSF 210

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 211 QIVDDILD 218


>gi|77461082|ref|YP_350589.1| polyprenyl synthetase [Pseudomonas fluorescens Pf0-1]
 gi|77385085|gb|ABA76598.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
          Length = 322

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDMRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A A+  + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALAGATAEQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|329938314|ref|ZP_08287765.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
           M045]
 gi|329302803|gb|EGG46693.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
           M045]
          Length = 336

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAEVRRGVDSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L + A  +++    +    +R Q           + ++ GQ+L+  
Sbjct: 111 TRWGNSVAVLTGDFLFSRASHMLADLGPE---AVRIQAE-------AFERLVTGQILETA 160

Query: 169 D--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              +  D  + ++ +   KTG+L+  AC  GA+M+ A +   + L  +GE LG+ FQLAD
Sbjct: 161 GPRDGRDPVEHYLDVLAGKTGSLVAVACRFGAMMSGADETVVDVLTQYGERLGVAFQLAD 220

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 221 DVLDIASD 228


>gi|261193789|ref|XP_002623300.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
           SLH14081]
 gi|239588905|gb|EEQ71548.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
           SLH14081]
          Length = 520

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 262 RLAEITELIHTASLLHDDV--IDNAVTRRSAVSANLEFGNKMAVLAGDFLLGRASVALA- 318

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187
              +L+D    +L+ ++  N+ ++G    +   +  ++   F ++T  + +QK  +K+ +
Sbjct: 319 ---RLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 374

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 375 LISKSCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLD 416


>gi|254418195|ref|ZP_05031919.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
 gi|196184372|gb|EDX79348.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
          Length = 324

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 10/183 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  L    A         L+  ++ AA+E IH  +L+HDD+  +D   +RRGK  
Sbjct: 41  GGKRLRPLLTVAAARASGTEGDILSPKKLAAAVEFIHTATLLHDDI--VDASELRRGKVA 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            H+ +   T+++ G+ L   AFE++        D++R+  +L+    +  +G +  Q+  
Sbjct: 99  AHLIWGAPTSVLVGDFLFARAFELMVE-----TDSMRALGILAQASRVISEGEVL-QLTR 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             D  +D+     I   KT  L   A E+GA+ A A       LR +G  LGI FQLADD
Sbjct: 153 AHDLNLDQATYLQIISAKTAELFAAAAEAGAVGAGADAAATAALRDYGMALGIAFQLADD 212

Query: 227 LLD 229
            LD
Sbjct: 213 ALD 215


>gi|262275074|ref|ZP_06052885.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Grimontia
           hollisae CIP 101886]
 gi|262221637|gb|EEY72951.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Grimontia
           hollisae CIP 101886]
          Length = 323

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L               +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLAVLSGRALGYQGEGHITAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L+ ++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AMFGNAASVLVGDYIYTRSFQMM----TELR-SLRILDLMSKATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+A AS+  +  ++ +G  LG  FQL DD++
Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILADASEEIETAMQDYGRYLGTAFQLIDDVM 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|71278535|ref|YP_271161.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H]
 gi|71144275|gb|AAZ24748.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H]
          Length = 327

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A  F       L + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEFIHTATLLHDDV--VDESNMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L D +R   +LS   NI  +G +  Q+++  
Sbjct: 105 ALFGNSASVLVGDFLYTRSFQMM----TKLGD-MRIMDILSEATNIVAEGEVL-QLMNCN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A      ++ +  +G+ LG  FQL DD++
Sbjct: 159 DASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGTAFQLVDDIM 218

Query: 229 DCEED 233
           D   D
Sbjct: 219 DYTAD 223


>gi|24215915|ref|NP_713396.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24197125|gb|AAN50414.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 319

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHL 70
           ++  + D L+ +    ++T  + + ++LS I+   +  GGK+IR  L      L   +  
Sbjct: 2   KVSVLKDSLIRKFDKKLETIIREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L VGA  E IH  SL+HDD+  +D    RRG  +V  ++   TAI+AG+ LL    + 
Sbjct: 62  HWLDVGAIAELIHAASLLHDDV--VDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDH 119

Query: 131 ISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTGA 187
           ++         + +Q++  LS++  I ++     ++ LDI ++ I           KT +
Sbjct: 120 LNGLGYPELMEVFTQVIKDLSVSELIQMEWEKNPKITLDIYNKII---------YGKTAS 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L    C S  I++  ++ EK++LR FG +LG  FQ  DD +D
Sbjct: 171 LFAVVCVSAGILSDKNEKEKKKLRQFGIDLGSFFQKKDDAID 212


>gi|254391153|ref|ZP_05006360.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294814410|ref|ZP_06773053.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326442800|ref|ZP_08217534.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197704847|gb|EDY50659.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294327009|gb|EFG08652.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 336

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRPLLVMLAAQFGDPYSPGVVPAAVVMELTHLATLYHDDV--MDEADVRRGVPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L+  
Sbjct: 111 ARWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160

Query: 169 D--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              E  D  + ++ +   KTG+L+  +   GA+MA A +   + L  +GE LG+ FQLAD
Sbjct: 161 GPREGGDPIEHYLDVIGGKTGSLIAVSGRIGAMMAGADERIVDTLTQYGERLGVAFQLAD 220

Query: 226 DLLD 229
           D+LD
Sbjct: 221 DVLD 224


>gi|89894978|ref|YP_518465.1| hypothetical protein DSY2232 [Desulfitobacterium hafniense Y51]
 gi|89334426|dbj|BAE84021.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 322

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 8/190 (4%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           SA++    GGK++R          +       L V  A+E IH  +L+HDD+  +D    
Sbjct: 35  SAVQLLEAGGKRLRPAFTLLAGKFYGYPIDRLLPVAMALELIHMATLVHDDV--VDASMT 92

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+PTV  ++  V +I  G+    Y          Q+     S+++  ++  +  QG +
Sbjct: 93  RRGRPTVKAKWGNVVSIATGD----YLLAKALELLAQINHPEVSKILAEVSVEMS-QGEI 147

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             Q+    D   +  Q +   K KT  L+  +C+ GA+++ A + E   L  +G  LG+ 
Sbjct: 148 Q-QIKASNDVNQNLKQYYYRIKRKTAMLISASCKLGALVSAAPRREVWALGAYGHALGMA 206

Query: 221 FQLADDLLDC 230
           FQ+ DD+LD 
Sbjct: 207 FQIVDDVLDV 216


>gi|152992234|ref|YP_001357955.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1]
 gi|151424095|dbj|BAF71598.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1]
          Length = 298

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 22/187 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L+ + A     N L+ ++  A +E IH  SL+HDD+  +D+ Y RR KP+++ 
Sbjct: 31  GKRLRAKLILKIAG----NGLSVVKTAAVVEMIHAASLLHDDV--IDDAYTRRSKPSLNA 84

Query: 110 QYDEVTAIIAGNGLLTYAF-EI--ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            Y   TAI+ G+ L +  F E+  ISS   ++  N  +QL L    ++ L  +       
Sbjct: 85  LYGNKTAIMLGDILYSKGFFELNNISSEVAKIVSNAVTQLSLGELKDVSLSKIFNTD--- 141

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++ ++D     MI + KT +L+  +       A  +   KE    +G NLG+ FQ+ DD
Sbjct: 142 -KEIYLD-----MIYQ-KTASLIEASA---GAAAVLAGKPKEAYMTYGRNLGMAFQMIDD 191

Query: 227 LLDCEED 233
           LLD   D
Sbjct: 192 LLDITSD 198


>gi|45656805|ref|YP_000891.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600041|gb|AAS69528.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 319

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHL 70
           ++  + D L+ +    ++T  + + ++LS I+   +  GGK+IR  L      L   +  
Sbjct: 2   KVSVLKDSLIRKFDKKLETIIREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L VGA  E IH  SL+HDD+  +D    RRG  +V  ++   TAI+AG+ LL    + 
Sbjct: 62  HWLDVGAIAELIHAASLLHDDV--VDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDH 119

Query: 131 ISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTGA 187
           ++         + +Q++  LS++  I ++     ++ LDI ++ I           KT +
Sbjct: 120 LNGLGYPELMEVFTQVIKDLSVSELIQMEWEKNPKITLDIYNKII---------YGKTAS 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L    C S  I++  ++ EK++LR FG +LG  FQ  DD +D
Sbjct: 171 LFAVVCVSAGILSDKNEKEKKKLRQFGIDLGSFFQKKDDAID 212


>gi|23099243|ref|NP_692709.1| heptaprenyl diphosphate synthase component II [Oceanobacillus
           iheyensis HTE831]
 gi|22777472|dbj|BAC13744.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Oceanobacillus iheyensis HTE831]
          Length = 323

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   + L N +     +V   +E IH  +L+HDD+  +D   +RRGKPT  
Sbjct: 43  GGKRIRPVFVLLSSQLGNYDLSKIKKVAVTLELIHMATLVHDDV--IDEAELRRGKPTTA 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    A+  G+ +L  A E I    T++ D    QL+      + +     G++  I+
Sbjct: 101 SIYGNRVAMYTGDYILARALEEI----TEIPDPRVHQLLSKTLVEVSI-----GEIEQIE 151

Query: 169 DEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            +F  E     ++ + K KT  L+  +C+ GAI+   +  +  +L  +G  +G+ +Q+ D
Sbjct: 152 YKFNWEQNFRDYLRRIKRKTALLIASSCKLGAIVGGLNDYQTNKLYQYGYYIGMSYQIID 211

Query: 226 DLLD 229
           D+LD
Sbjct: 212 DILD 215


>gi|71383196|ref|XP_802138.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70846534|gb|EAN80692.1| farnesyl synthetase, putative [Trypanosoma cruzi]
          Length = 292

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+G   E +H  +L+HDD+  MDN   RRG+PTVH  YD   A++AG+ LL  A   I+
Sbjct: 55  LRLGEITELLHTATLVHDDV--MDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIA 112

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +       + R  L++S      L+ +  G+M+ + D   D          KT +L+  +
Sbjct: 113 A-----LGHSRVVLLMS----TALEDLAAGEMMQM-DGCFDIESYEQKSYCKTASLIANS 162

Query: 193 CESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
             S A++A       E     FG++LGI FQ+ DD LD   D
Sbjct: 163 LASTAVLAGLPNTAYEEAAAKFGKHLGIAFQIVDDCLDITGD 204


>gi|258592999|emb|CBE69310.1| Polyprenyl synthetase [NC10 bacterium 'Dutch sediment']
          Length = 325

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 30/204 (14%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           IRY L  GGK++R  L+   A L   N  +  + +    E +H  +LIHDD+  +D    
Sbjct: 36  IRYVLKSGGKRVRPALLLLSAKLCGYNGGSRHIDLAVVAEYMHAATLIHDDI--IDRADK 93

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG P+ +  +    +++AG+ L   + +++          I   L +          M+
Sbjct: 94  RRGLPSANSTWGSQISVLAGDFLYARSLQMLV---------IDGDLAVMRAFADATVRMI 144

Query: 161 GGQMLDIQ---------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            GQ+ ++Q         DE++D      I   KT AL+  AC +GA++A     E   L 
Sbjct: 145 EGQVREVQMAGNLDLTYDEYLD------IITSKTAALISVACRTGALIAGRQPEEVAALT 198

Query: 212 CFGENLGIIFQLADDLLD--CEED 233
            FG ++GI FQL DD LD   EED
Sbjct: 199 EFGLDVGIAFQLVDDALDFVAEED 222


>gi|170103887|ref|XP_001883158.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642039|gb|EDR06297.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 434

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 18/171 (10%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T LR+   +E +H  SL+HDD+  +D   +RRG P+   ++    +++ GN +L  A   
Sbjct: 164 TQLRLAQIVEMLHTASLLHDDV--IDASPLRRGAPSAPSKFGSKLSVLGGNFILGRA--- 218

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQK-- 182
            S+   +L D   +QL+ S+  N+    +L  QM D++D+ +             +QK  
Sbjct: 219 -STALARLGDAEVTQLIASVISNLVEGEIL--QMRDVKDKDVGVEGKTKNAWTVYLQKTY 275

Query: 183 MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231
           +KT +LM     S  ++    + E  K+    +G NLGI FQL DD+LD E
Sbjct: 276 LKTASLMAKGARSAVVLGGCEEGEVWKDIAYAYGRNLGIAFQLIDDILDYE 326


>gi|71403571|ref|XP_804573.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener]
 gi|14582479|gb|AAK69519.1|AF282771_1 solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|70867614|gb|EAN82722.1| farnesyl synthetase, putative [Trypanosoma cruzi]
 gi|258676433|gb|ACV87213.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676435|gb|ACV87214.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
          Length = 363

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+G   E +H  +L+HDD+  MDN   RRG+PTVH  YD   A++AG+ LL  A   I+
Sbjct: 114 LRLGEITELLHTATLVHDDV--MDNSNTRRGQPTVHCLYDTKRAVLAGDFLLARASIWIA 171

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +       + R  L++S      L+ +  G+M+ + D   D          KT +L+  +
Sbjct: 172 A-----LGHSRVVLLMS----TALEDLAAGEMMQM-DGCFDIESYEQKSYCKTASLIANS 221

Query: 193 CESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
             S A++A       E     FG++LGI FQ+ DD LD   D
Sbjct: 222 LASTAVLAGLPNTAYEEAAAKFGKHLGIAFQIVDDCLDITGD 263


>gi|303229377|ref|ZP_07316167.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515913|gb|EFL57865.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a]
          Length = 323

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ L    A+         +++  A+E +H  +LIHDD+  +D   IRRG+ T+H
Sbjct: 46  GGKRLRAQLCLLIANAGTSVEAERIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  AI++G+ L   AF I+S         I S ++  L           G+ + ++
Sbjct: 104 KHKGNKVAILSGDYLFAKAFRIVSEMPHMEYLKIFSHIITCLVE---------GEFMQME 154

Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + ID+    +M +  K  A     C E G ++   S +E   L+ +G  LG+ FQ+ D
Sbjct: 155 DVYRIDQGIDRYMTKTQKKTADFMEGCMELGGLLGGWSSDEIMYLKRYGHALGMAFQITD 214

Query: 226 DLLDCEE 232
           D++D  E
Sbjct: 215 DIMDYRE 221


>gi|17547542|ref|NP_520944.1| octaprenyl-diphosphate synthase [Ralstonia solanacearum GMI1000]
 gi|17429846|emb|CAD16530.1| probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthase) protein [Ralstonia solanacearum GMI1000]
          Length = 322

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPVILLLMANALGYRGQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        D++R   +L+   N+  +G +  Q+L++ 
Sbjct: 101 AVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA+++ A    +     +G  +G  FQ+ DDLL
Sbjct: 155 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|312200053|ref|YP_004020114.1| polyprenyl synthetase [Frankia sp. EuI1c]
 gi|311231389|gb|ADP84244.1| Polyprenyl synthetase [Frankia sp. EuI1c]
          Length = 333

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 19/187 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V   A   +      ++  AAIE  H  +L HDD+  MD   +RRG  + +
Sbjct: 54  GGKRFRPMVVLLAAHFADPAAPEVIQAAAAIELTHLSTLYHDDV--MDEAPLRRGAASAN 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++    AI+ G+ L   A EI +   P+      I +Q + +L           GQ+ +
Sbjct: 112 ARWTNTVAILVGDYLFARASEITADLGPEAT---RILAQTIATLCE---------GQIRE 159

Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                 D+  V     +   KT +L+  +   GA+M+ A     + L  FGE +G+ FQL
Sbjct: 160 TVGPMPDDDPVEHYLRVVTGKTASLIAASGRLGAMMSGADPVTADILATFGERIGVCFQL 219

Query: 224 ADDLLDC 230
           +DD++D 
Sbjct: 220 SDDIIDV 226


>gi|309753120|gb|ADO85577.1| PntB [Streptomyces arenae]
          Length = 337

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A         AL    A+E +H +SL+HDDL  MD    RR + TV  
Sbjct: 53  GKAVRPALALLSAEAVGAAPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +   +AI+ G+ +L  A E++      L   + +    +       + ++ GQ+ D+  
Sbjct: 111 LWGPSSAILTGDAMLALAQEVL------LDTGLPTAASAARLLARTTRHLIRGQVQDLAF 164

Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            Q   +   +   +   KTGAL+  +   GA++A A +   + L  +G+ +G+ FQL DD
Sbjct: 165 EQRSHVTVEECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224

Query: 227 LLDCEED 233
           +L    D
Sbjct: 225 VLGIWGD 231


>gi|284165809|ref|YP_003404088.1| dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511]
 gi|284015464|gb|ADB61415.1| Dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511]
          Length = 349

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 28/221 (12%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNV---------------NHLTA 72
            +  Q  +RL  A RY L  GGK++R + L+T   SL +V               N +  
Sbjct: 29  ELPIQRPERLYEASRYLLDAGGKRLRPTVLLTVAESLLDVEPLSTDYREFPTLNGNRIDI 88

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    ++E I  ++LIH     MD+  +RRG P VH +YD  TAI+AG+ L + AFEI+ 
Sbjct: 89  MDAAVSVEVIQSFTLIH--DDIMDDDDLRRGVPAVHKEYDLETAILAGDTLYSKAFEIML 146

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFID---ETQVFMIQKMKTGAL 188
               +   ++ +  +L+ T       +  GQ LD+  +E  D   E  + M+++ KT  L
Sbjct: 147 ETGAKPDRSVEALNVLATT----CTKICEGQSLDVTFEERADVSPEEYLEMVEQ-KTAVL 201

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              +    AI+  A +   + L  +G ++G  FQ+ DD+LD
Sbjct: 202 YAASACLPAILLGADEETIDALYGYGLDIGRAFQIQDDVLD 242


>gi|223943155|gb|ACN25661.1| unknown [Zea mays]
          Length = 413

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  ++ LTA   R+   IE IH  SLIHDD+  +D+  +RR
Sbjct: 131 GGKRLRPALVFLVSRATAELAGLSELTAEHRRLAEIIEMIHTASLIHDDV--IDDSGMRR 188

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T+H  Y    A++AG+ +   +   ++        N+ +  ++ L   + ++    G
Sbjct: 189 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 239

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F   I      +    KT +L+  + +S +I +  S    E++  +G NLG+
Sbjct: 240 EIKQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGL 299

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 300 SFQVVDDILD 309


>gi|242813946|ref|XP_002486271.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218714610|gb|EED14033.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 465

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + + Q+    A++AG+ LL  A   ++ 
Sbjct: 207 RLAEITELIHTASLLHDDV--IDNAVTRRSSSSANTQFGNKMAVLAGDFLLGRASVALA- 263

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK--M 183
              +L++    +L+ ++  N     ++ G+ + ++    DE    F D+T  + +QK  +
Sbjct: 264 ---RLRNPEVIELLATVIAN-----LVEGEFMQLKNTASDERSPVFTDDTITYYLQKTYL 315

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++ +++ +  E    +G NLG+ FQL DD+LD
Sbjct: 316 KTASLISKSCRAAALLGNSTPDIVEAAYSYGRNLGLAFQLVDDMLD 361


>gi|34496302|ref|NP_900517.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
           12472]
 gi|34102155|gb|AAQ58522.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
           12472]
          Length = 309

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L                 + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPILTLLSGRALGYRGEHLFELAAMIEFIHTATLLHDDV--VDESDLRRGRKTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++ + +     N+    +++   NI  +G +  Q+L+I 
Sbjct: 88  ALFGNAASVLVGDFLYTRAFQMMVTTR-----NMTILEVMAEATNIIAEGEVL-QLLNIG 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E +   + + KT  L   A   GA++A AS  +   +  +G  LG  FQ+ DD+L
Sbjct: 142 NTDVSEDEYLKVIQYKTAKLFEAAARVGALIADASAEQVRAMADYGMYLGTAFQIIDDVL 201

Query: 229 DCEED 233
           D   D
Sbjct: 202 DYSGD 206


>gi|120599984|ref|YP_964558.1| trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1]
 gi|146292082|ref|YP_001182506.1| trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32]
 gi|120560077|gb|ABM26004.1| Trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1]
 gi|145563772|gb|ABP74707.1| Trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32]
          Length = 331

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARTVSYEGDAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L DN+R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DNMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A AS  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASTEQETALGNYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|228990628|ref|ZP_04150593.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           pseudomycoides DSM 12442]
 gi|228996726|ref|ZP_04156363.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
           Rock3-17]
 gi|228763045|gb|EEM11955.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
           Rock3-17]
 gi|228769154|gb|EEM17752.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           pseudomycoides DSM 12442]
          Length = 320

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 25/229 (10%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR- 74
           ID I  +L    AS  Q   +    +A++    GGK+IR   V   A  F    L A++ 
Sbjct: 14  IDVIEKELKKVVASEQQLIED----AALQLIEAGGKRIRPVFVL-LAGKFGDYKLDAIKH 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V  A+E IH  SL+HDD+  +D   +RR   TV+ ++ +  A+  G+ L   + E I++ 
Sbjct: 69  VAVALELIHMASLVHDDV--IDAALLRRSSATVNAKWGDRIAMYTGDYLFAKSLECITNL 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ----KMKTGALMC 190
           +        S  +L +           G++  I+D++ D  Q         K KT  L+ 
Sbjct: 127 EVPEAHQALSYTILEVCK---------GEIEQIKDKY-DYNQNLRTYLRRIKRKTALLIA 176

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
            +C+ GAI + AS++   RL  +G  +G+ +Q+ DD+LD    EE L K
Sbjct: 177 ASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEKLGK 225


>gi|227873689|ref|ZP_03991923.1| possible Farnesyltranstransferase [Oribacterium sinus F0268]
 gi|227840478|gb|EEJ50874.1| possible Farnesyltranstransferase [Oribacterium sinus F0268]
          Length = 175

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 56/82 (68%), Gaps = 2/82 (2%)

Query: 150 LTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L  + G++GM+GGQ+LDI+   + + E ++F I K KT AL+  + E GA++  A+  E+
Sbjct: 19  LAKSAGIEGMIGGQVLDIEKTGQPLTEEELFFIYKKKTAALLSASLEIGALLGGANPEEQ 78

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           E+L  FGE +G+ FQ+ DD+LD
Sbjct: 79  EKLSSFGEKIGLAFQIRDDILD 100


>gi|325577651|ref|ZP_08147926.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160396|gb|EGC72522.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 331

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A                +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRIRPLIAVLAARALGYESDKVATCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++  + Q  D +R   +++   N+  +G +  Q++++ 
Sbjct: 109 SAFGNAASVLVGDFIYTRAFQLVA--QLQSLDILR---IMADATNVLAEGEVQ-QLMNVN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +S AI+A A ++ +   + +G  LG  FQL DD+L
Sbjct: 163 DPDTTEESYMRVIYSKTARLFEVAAQSVAIVAGAEKSIETAFQEYGRYLGTAFQLVDDVL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|254491038|ref|ZP_05104219.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010]
 gi|224463551|gb|EEF79819.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010]
          Length = 322

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A          + +   IE IH  +L+HDD+  +DN  +RRGK T +
Sbjct: 43  GGKRLRPAIAILSAKACGYEGDKHINLATIIEFIHTATLLHDDV--VDNSAMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +FE++        D++R   +LS T NI  +G +  Q+L+  
Sbjct: 101 NLWGNEASVLVGDFLYTRSFEMMVE-----MDSMRLMRILSSTTNIIAEGEVL-QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   +   KT  L   A + GA+++ ++ + ++ +  +  +LG  FQL DDLL
Sbjct: 155 DADTTEARYLEVIHHKTAKLFEAAGQLGAVISRSADDIEQAMARYAMHLGSAFQLVDDLL 214

Query: 229 DCEE 232
           D  +
Sbjct: 215 DYSQ 218


>gi|168701670|ref|ZP_02733947.1| polyprenyl synthase [Gemmata obscuriglobus UQM 2246]
          Length = 348

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 23/187 (12%)

Query: 50  GKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GK++R  L+      C  +   +H  A    AA+E IH  +L+HDD+  +D   +RR  P
Sbjct: 71  GKRLRPALLLLTAEACGGVAPAHHTLA----AAMEMIHTATLVHDDV--LDEADVRRHAP 124

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T    +    +I+ G+ L T+AF + S+      D    Q+   +T+ +       G++ 
Sbjct: 125 TFRAGWGNKVSILLGDMLFTHAFHLTST-----VDGRACQITGEVTNRV-----CAGELR 174

Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            + +     + E   F +   KT AL       GA+ A AS+    ++  +G ++G+ FQ
Sbjct: 175 QVTERGNLELSEADYFAVIDGKTAALTECCGRLGALYAGASEEVAAKMASYGRSVGLAFQ 234

Query: 223 LADDLLD 229
           +ADDLLD
Sbjct: 235 IADDLLD 241


>gi|118431580|ref|NP_148152.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1]
 gi|116062905|dbj|BAA80767.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1]
          Length = 332

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 49  GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  +    A +         A+ + A+IE  H +SLIHDD+  MD   +RRG PT
Sbjct: 43  GGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI--MDRDEVRRGVPT 100

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            H+ Y +  AI+AG+ L   AF++I+  +     + ++     +     +Q +  GQ  D
Sbjct: 101 THVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSEAAIQ-ISRGQAYD 159

Query: 167 I---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   +   +D      + ++KTGAL+  A   GA+ A A    ++ +   G N GI FQ+
Sbjct: 160 MLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQI 219

Query: 224 ADDLLDCEEDLPK 236
            DD+L    D PK
Sbjct: 220 RDDILGVIGD-PK 231


>gi|298369461|ref|ZP_06980778.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282018|gb|EFI23506.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 324

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIITILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRETAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++ +  +     ++   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVASGS-----MKILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E Q   + + KT  L   A + GAI+  A+  +++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEKQYIQVIQYKTAKLFEAAAQVGAILGGANPAQEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|145590446|ref|YP_001152448.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282214|gb|ABP49796.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 334

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 31/219 (14%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D    A+ Y L  GGK++R  L    A   +     AL   A +E IH YSLI+DD+  +
Sbjct: 29  DDFHEAVLYQLKTGGKRLRPLLTLATAEAVSGRWEPALPAAAIVELIHNYSLIYDDI--I 86

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNI 154
           D G +RRG PTV   + +  AI+ G        E ++ +PK          L+ +     
Sbjct: 87  DRGDVRRGMPTVRKAFGDNAAILIGIWYREAIEEAVLETPKP---------LVFAREVAK 137

Query: 155 GLQGMLGGQMLDI-------QDEFIDETQ---------VFMIQKMKTGALMCFACESGAI 198
            ++ +  G+ LDI        D +  + +         V M+  +KTG L+  A + G +
Sbjct: 138 VIKAIDEGERLDILFECAGRSDPYFAKARWKEVTLDDYVKMVS-LKTGVLIAAAAKWGVL 196

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
                 +  E    FG N GI FQ+ DD+LD   D PKK
Sbjct: 197 SVSDDGDLAEAAWNFGLNAGIAFQIIDDVLDIYGD-PKK 234


>gi|303231368|ref|ZP_07318102.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513964|gb|EFL55972.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6]
          Length = 323

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ L    A+         +++  A+E +H  +LIHDD+  +D   IRRG+ T+H
Sbjct: 46  GGKRLRAQLCLLIANAGTSVEAERIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  AI++G+ L   AF I+S         I S ++  L           G+ + ++
Sbjct: 104 KHKGNKVAILSGDYLFAKAFRIVSEMPHMEYLKIFSHIITCLVE---------GEFMQME 154

Query: 169 DEF-IDE-TQVFMIQKMKTGALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + ID+    +M +  K  A     C E G ++   S +E   L+ +G  LG+ FQ+ D
Sbjct: 155 DVYRIDQGIDRYMTKTQKKTADFMEGCMELGGLLGGWSSDEIMYLKRYGHALGMAFQITD 214

Query: 226 DLLDCEE 232
           D++D  E
Sbjct: 215 DIMDYRE 221


>gi|323481190|gb|ADX80629.1| polyprenyl synthetase family protein [Enterococcus faecalis 62]
          Length = 326

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVSLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KTG L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTGELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|301154821|emb|CBW14284.1| octaprenyl diphosphate synthase [Haemophilus parainfluenzae T3T1]
          Length = 331

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A                +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRIRPLIAVLAARALGYESDKVATCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++  + Q  D +R   +++   N+  +G +  Q++++ 
Sbjct: 109 SAFGNAASVLVGDFIYTRAFQLVA--QLQSLDILR---IMADATNVLAEGEVQ-QLMNVN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +S AI+A A ++ +   + +G  LG  FQL DD+L
Sbjct: 163 DPDTTEESYMRVIYSKTARLFEVAAQSVAIVAGAEKSIETAFQEYGRYLGTAFQLVDDVL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|207744381|ref|YP_002260773.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
           protein [Ralstonia solanacearum IPO1609]
 gi|206595786|emb|CAQ62713.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
           protein [Ralstonia solanacearum IPO1609]
          Length = 338

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 73  GGKRLRPVILLLMANALGYRGNHHYELAAVVEFIHTAALLHDDV--VDESELRRGRQTAN 130

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        D++R   +L+   N+  +G +  Q+L++ 
Sbjct: 131 AVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 184

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA+++ A    +     +G  +G  FQ+ DDLL
Sbjct: 185 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 244

Query: 229 D 229
           D
Sbjct: 245 D 245


>gi|207721484|ref|YP_002251924.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
           protein [Ralstonia solanacearum MolK2]
 gi|206586644|emb|CAQ17230.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
           protein [Ralstonia solanacearum MolK2]
          Length = 352

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 73  GGKRLRPVILLLMANALGYRGNHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 130

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        D++R   +L+   N+  +G +  Q+L++ 
Sbjct: 131 AVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 184

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA+++ A    +     +G  +G  FQ+ DDLL
Sbjct: 185 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 244

Query: 229 D 229
           D
Sbjct: 245 D 245


>gi|145355263|ref|XP_001421884.1| chloroplast Clp protease, subunit of ClpP peptidase complex
           [Ostreococcus lucimarinus CCE9901]
 gi|144582123|gb|ABP00178.1| chloroplast Clp protease, subunit of ClpP peptidase complex
           [Ostreococcus lucimarinus CCE9901]
          Length = 311

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 19/198 (9%)

Query: 49  GGKKIRSFLV----TECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R  LV       A L +++ +T    R+    E IH  SL+HDD+  +D+   RR
Sbjct: 30  GGKRLRPVLVFLVARATAELMHMSDITDRQRRLAEITEMIHTASLVHDDV--LDDCDTRR 87

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLG 161
           GK T+H  Y    AI+AG+ L   +   +++        + SQ++       I   G L 
Sbjct: 88  GKETIHTLYGARVAILAGDFLFAQSSWFLANLDNLEVIKLISQVIADFADGEISQAGALF 147

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              L + DE+++++        KT +L+  +C+S A+ +  +++ K  +  +G++LG+ F
Sbjct: 148 NCDLTL-DEYLEKSH------NKTASLIAASCKSAAVFSEVTESVKVDMYEYGKHLGLAF 200

Query: 222 QLADDLLD---CEEDLPK 236
           Q+ DD+LD    EE L K
Sbjct: 201 QVVDDILDFTQSEEQLGK 218


>gi|126348100|emb|CAJ89821.1| putative polyprenyl diphosphate synthase [Streptomyces ambofaciens
           ATCC 23877]
          Length = 354

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 10/189 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +    +    A+E +H +SL+HDD+  MD    RR +P V 
Sbjct: 65  GGKGVRQALAVLGAEAAGASGRAGVPAAVAVELVHAFSLLHDDI--MDGDPDRRRRPAVW 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQM 164
             Y    A++AG+ L   A E ++          R+  +LS   N  ++G    +L  + 
Sbjct: 123 KAYGTGPAVLAGDALFALAVETLAVAPA----GPRTVRLLSTALNDLVRGQADDLLFAER 178

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                E +   +   + + KTG+L+  A   GA++  A +     L   G  LG+ FQ+ 
Sbjct: 179 PWTGPERVRPHEYRAMAEHKTGSLLGCAAAMGAVLGGAPRTTVTALDRAGRQLGVAFQVV 238

Query: 225 DDLLDCEED 233
           DD+L    D
Sbjct: 239 DDVLGIWGD 247


>gi|6682999|dbj|BAA88983.1| farnesylgeranyl diphosphate synthase [Aeropyrum pernix]
          Length = 318

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 49  GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  +    A +         A+ + A+IE  H +SLIHDD+  MD   +RRG PT
Sbjct: 29  GGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI--MDRDEVRRGVPT 86

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            H+ Y +  AI+AG+ L   AF++I+  +     + ++     +     +Q +  GQ  D
Sbjct: 87  THVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSEAAIQ-ISRGQAYD 145

Query: 167 I---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   +   +D      + ++KTGAL+  A   GA+ A A    ++ +   G N GI FQ+
Sbjct: 146 MLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQI 205

Query: 224 ADDLLDCEEDLPK 236
            DD+L    D PK
Sbjct: 206 RDDILGVIGD-PK 217


>gi|194703306|gb|ACF85737.1| unknown [Zea mays]
 gi|194703680|gb|ACF85924.1| unknown [Zea mays]
 gi|194704700|gb|ACF86434.1| unknown [Zea mays]
 gi|223946673|gb|ACN27420.1| unknown [Zea mays]
          Length = 424

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  ++ LTA   R+   IE IH  SLIHDD+  +D+  +RR
Sbjct: 142 GGKRLRPALVFLVSRATAELAGLSELTAEHRRLAEIIEMIHTASLIHDDV--IDDSGMRR 199

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T+H  Y    A++AG+ +   +   ++        N+ +  ++ L   + ++    G
Sbjct: 200 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 250

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F   I      +    KT +L+  + +S +I +  S    E++  +G NLG+
Sbjct: 251 EIKQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGL 310

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 311 SFQVVDDILD 320


>gi|317050825|ref|YP_004111941.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
 gi|316945909|gb|ADU65385.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
          Length = 326

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   + L   +   A+++G  IE IH  +L+HDD+  +D   +RRG+ + +
Sbjct: 43  GGKRIRPLLVLLTSKLCGGDERRAIKIGGIIEYIHTATLLHDDV--IDEACVRRGRDSAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++     I+ G+ L + AF+++ +       + R Q  LS    +  +G +  Q++   
Sbjct: 101 FKFGNEMVILVGDYLYSKAFQVLVA-----DGDPRVQKTLSDVTTLMSEGEV-FQLVKSF 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDL 227
           D  +     F I + KT  L+    + G   A   S+   + L  FG N+G+ FQL DD+
Sbjct: 155 DFSVTLEDYFQIIEHKTAILIAACAKCGGYTAPDLSEEMADALWDFGYNIGMAFQLIDDI 214

Query: 228 LD 229
           LD
Sbjct: 215 LD 216


>gi|239908218|ref|YP_002954959.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1]
 gi|239798084|dbj|BAH77073.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1]
          Length = 322

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 15/198 (7%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  +   +R+ LL GGK++R  L    A            +  ++E +H  +L+HDD+  
Sbjct: 27  NPMVQPVVRHVLLAGGKRLRPLLTILTARAMGYRADDVYPLACSLEFLHSATLLHDDI-- 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D   +RRG+ + H+++     I+AG+ LL  A  +++       DN     +LS     
Sbjct: 85  LDGAKLRRGRESAHVRFGSTHTILAGDVLLALANRLVAE-----YDNPELTKLLSE---- 135

Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            L     G++L+I   +D  +     F I   KT  L+  +C+ GA++A AS    +   
Sbjct: 136 ALLQTATGEILEIAHLRDVDLPLDTYFSIITGKTAYLIQASCQCGAVLAGASPRLIQAAA 195

Query: 212 CFGENLGIIFQLADDLLD 229
             G ++G+ FQL DD LD
Sbjct: 196 DLGHHIGVAFQLVDDALD 213


>gi|154251178|ref|YP_001412002.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154155128|gb|ABS62345.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 339

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    + L   N    +++ A +E +H  +L+HDD+  +D   +RRG  T  
Sbjct: 58  GGKRLRPMLTIAASRLCGYNGTDHIKLAATVEFLHTATLLHDDV--VDESDMRRGAKTAR 115

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++   K+     +R+  +++   ++  +G +  Q+   +
Sbjct: 116 MLWGNQASVLVGDFLLGRAFKLMVETKS-----LRALEIIADAASVIAEGEVM-QLAAAK 169

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT AL   A E GA+++  + +E   L  +G NLGI FQL DD L
Sbjct: 170 DTGTTEDAYLRVIQAKTAALFAAATEIGAVISEKNGSEAAALESYGRNLGIAFQLVDDAL 229

Query: 229 D 229
           D
Sbjct: 230 D 230


>gi|290473433|ref|YP_003466299.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004]
 gi|289172732|emb|CBJ79503.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004]
          Length = 323

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 8/178 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +        +      ++V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAGKALHCEKEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AMYGNAASVLVGDFIYTRSFQMMTD-----LDSMRVLKLMSDATNVIAEGEVM-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D    E     +   KT  L   A  S AI++ A+  ++  LR +G  LG  FQL DD
Sbjct: 155 DPDTSEDDYMRVIYSKTARLFEVAAHSAAILSGATPEQEAALRDYGRYLGTAFQLIDD 212


>gi|148655833|ref|YP_001276038.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
 gi|148567943|gb|ABQ90088.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
          Length = 349

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ LV   A L   +   AL    AIE +H  SLIHDDL  +D+   RRG  TVH
Sbjct: 71  GGKRLRAALVLLSARLGAYDPGRALHPAIAIELLHAASLIHDDL--VDHAGQRRGHVTVH 128

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---L 165
            ++D   A++ G+    Y F + ++      D       +   +    Q M+ G++    
Sbjct: 129 TRWDADVALLLGD----YLFALAANELAAEPDP-----RIIAFYTSAAQTMVEGELNPVT 179

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            ++       Q +     KT  L   AC++G  +A   + + + L  FG +LG+ FQ+ D
Sbjct: 180 HVEPLATAVEQYYRKIGRKTAVLFEAACKAGIAVAGGDEEQIDALGRFGYDLGLAFQIVD 239

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 240 DVLDYTGD 247


>gi|68304932|gb|AAY89943.1| predicted octaprenyl-diphosphate synthase [uncultured bacterium
           BAC13K9BAC]
          Length = 319

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 13/182 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  ++   + LF  N    +  GA +E IH  +L+HDD+  +D   IR    T +
Sbjct: 44  GGKRIRPIILMLFSRLFK-NEKNVIEAGAILELIHAATLLHDDV--VDQSDIRHNIKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + + +A++ G+ L + AFE+I     +     +   +L+ T N   QG +   M  ++
Sbjct: 101 KLWGDDSAVLVGDFLYSRAFELIVDINKE-----KVYKILAETTNQISQGEVIQLM--VK 153

Query: 169 DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           D+ ID T  ++ I  +KTG L  F   +      A  N  +  + FG+N GI +QL +D 
Sbjct: 154 DKIIDNTDKYLNIIYLKTGKL--FEASAAVASELAGGNYIDNAKSFGKNFGIAYQLRNDY 211

Query: 228 LD 229
           LD
Sbjct: 212 LD 213


>gi|313681996|ref|YP_004059734.1| polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154856|gb|ADR33534.1| Polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 299

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 22/190 (11%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK++R+ L+   A     +   A  +GA +E IH  SL+HDD+  +D   +RRG P+
Sbjct: 31  LSGGKRLRARLILTIAP----HEPKAPLLGAIVELIHAASLLHDDV--IDEAQLRRGVPS 84

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V+      TAI+ G+ L + AF    S  T    +I   +  S+T       +  G+M+D
Sbjct: 85  VNATEGSKTAIMLGDILYSKAF----SELTSFDPSIARAVAESVTR------LSVGEMMD 134

Query: 167 IQ--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   + F  +  +++ +  +KT  L+     S A++A     + E    +G+NLG+ FQ+
Sbjct: 135 VSMAERFNTDRDLYLKMLYLKTATLIEACAYSAAVLA---GKDAEAHATYGKNLGLAFQI 191

Query: 224 ADDLLDCEED 233
            DD+LD   D
Sbjct: 192 VDDILDITAD 201


>gi|288941872|ref|YP_003444112.1| trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180]
 gi|288897244|gb|ADC63080.1| Trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180]
          Length = 322

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V   A          + + A +E IH  +L+HDD+  +D   +RR + T +
Sbjct: 43  GGKRLRPLSVLLAARACGYTGERHIDLAAIVEFIHTSTLLHDDV--VDGSELRRNRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L + +FE++         N+R   +L+   N   +G +  Q+L+ +
Sbjct: 101 VVWGNDASVLVGDFLYSRSFEMMVDVG-----NMRVMEVLAHATNRIAEGEVL-QLLNER 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D   DE +   +   KT  L       GA++A +    +E +R +G  LGI FQL DD L
Sbjct: 155 DPDTDEARYMEVISRKTATLFEAGTRLGAVIAESPPEIEEAIREYGLRLGIAFQLVDDAL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSVD 219


>gi|67008259|emb|CAJ00343.1| putative geranylgerannylpyrophosphate synthase [Andrographis
           paniculata]
          Length = 140

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PT H  + E TA++AG+ LL+ AF  ++     ++     + +  L   IG +G+
Sbjct: 1   LRRGRPTNHKVFGEDTAVLAGDALLSLAFNHVAEKTKNVEHCRVVRAIAELALAIGSEGL 60

Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQ++D+  + E I   ++  I   KT  L+  A   G I+      E E LR +   +
Sbjct: 61  VAGQIVDLDSEGEKISLNELEYIHVHKTSMLLEAAAVCGGILGGGESTEVESLRKYARCI 120

Query: 218 GIIFQLADDLLD 229
           G++FQ+ DD+LD
Sbjct: 121 GLLFQVVDDILD 132


>gi|224001362|ref|XP_002290353.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973775|gb|EED92105.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 318

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 25/191 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK+ R  +V   A     NH  +       ++G  +E IH  SLIHDD+  +D    RRG
Sbjct: 37  GKRFRPTIVQLMA---KANHQGSEVWRKQAQLGQIVEMIHVASLIHDDV--LDEADTRRG 91

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
              VH  Y    A++AG+ LL  A  +++    +L++    Q+M +      L+ ++ G+
Sbjct: 92  GEAVHKLYSNKVAVLAGDYLLARASVLLA----RLENTAVVQIMAT-----ALESLVAGE 142

Query: 164 MLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--FGENLG 218
           ++ ++   +E +           KT +L+C+AC S A++   +        C  FG ++G
Sbjct: 143 IMQLKASPEELLQMQSYLKKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHMG 202

Query: 219 IIFQLADDLLD 229
           + FQ+ DD+LD
Sbjct: 203 LAFQIQDDILD 213


>gi|289435907|ref|YP_003465779.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172151|emb|CBH28697.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 326

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 99/185 (53%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDFDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  + +D T    + ++  KT  L   +C SGA  + AS+    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMDVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|229549603|ref|ZP_04438328.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           ATCC 29200]
 gi|255972303|ref|ZP_05422889.1| polyprenyl synthetase [Enterococcus faecalis T1]
 gi|256956509|ref|ZP_05560680.1| polyprenyl synthetase [Enterococcus faecalis DS5]
 gi|300860196|ref|ZP_07106283.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
 gi|312951206|ref|ZP_07770108.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
 gi|229305268|gb|EEN71264.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           ATCC 29200]
 gi|255963321|gb|EET95797.1| polyprenyl synthetase [Enterococcus faecalis T1]
 gi|256947005|gb|EEU63637.1| polyprenyl synthetase [Enterococcus faecalis DS5]
 gi|300849235|gb|EFK76985.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
 gi|310630740|gb|EFQ14023.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
 gi|315034608|gb|EFT46540.1| polyprenyl synthetase [Enterococcus faecalis TX0027]
 gi|315152610|gb|EFT96626.1| polyprenyl synthetase [Enterococcus faecalis TX0031]
 gi|315159462|gb|EFU03479.1| polyprenyl synthetase [Enterococcus faecalis TX0312]
          Length = 326

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL T+            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVTLARSGGKLLRPAFFFLFTQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|281354894|ref|ZP_06241388.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281317774|gb|EFB01794.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 355

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 44/242 (18%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D LL       T   D L  A+R Y + GGK++R  ++     L   +   AL   AA+E
Sbjct: 13  DRLLADDEFPATVRPDYLRDAVRDYPVRGGKRLRPAMLIWSCGLLGGSESAALYPAAAVE 72

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------DEVT------AIIAG-- 120
             H ++L+HDD+   D+   RRG PT H++             D+        AI+AG  
Sbjct: 73  VFHNWTLVHDDIIDQDD--TRRGAPTSHVKLAAELGGRFSLAADDAERTGRDFAILAGDL 130

Query: 121 -----NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
                N LL  + E    P+  +    R Q + +         ++ G+ LD++    + T
Sbjct: 131 QQGWANDLLLRSAEHGVPPEVTVALGRRFQKLAN-------SDLISGEALDVEFSLRELT 183

Query: 176 -----QVFMIQKMKTGALMCFACESGAIM----AHASQNEKERLRCFGENLGIIFQLADD 226
                +V  +  +KTGAL+ F  E+GA++    A A   +  +L  F    GI FQL DD
Sbjct: 184 GLKSQEVRTMLGLKTGALLQFCTEAGAMIALNTADAEHPDVRKLSEFALAAGIAFQLRDD 243

Query: 227 LL 228
            L
Sbjct: 244 YL 245


>gi|257871265|ref|ZP_05650918.1| polyprenyl synthetase [Enterococcus gallinarum EG2]
 gi|257805429|gb|EEV34251.1| polyprenyl synthetase [Enterococcus gallinarum EG2]
          Length = 326

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 16/197 (8%)

Query: 43  IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + +   GGK +R    FL  +     +  +    ++ A++E +H  +LIHDD+  +D+  
Sbjct: 38  VDFTYSGGKMLRPALFFLFADLGEPIDERNDQLTKIAASLEILHMATLIHDDI--IDDSP 95

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+ TV  +Y +  A+  G+ L T  FE+       L +++     L+ T+   ++ +
Sbjct: 96  LRRGRITVQAKYGKDIAVYTGDLLFTQFFEL-------LIESMNGSHFLA-TNAQAMKRL 147

Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++  +   + IDE+    +Q +  KT  L   AC  GA         +ER    G N
Sbjct: 148 LLGELDQMHTRYNIDESIADYLQSINGKTAELFWLACIEGAHFGGLDLENQERAGEIGRN 207

Query: 217 LGIIFQLADDLLDCEED 233
           +GI FQ+ DD+LD   D
Sbjct: 208 IGIAFQVFDDILDYTAD 224


>gi|256961512|ref|ZP_05565683.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
 gi|293385200|ref|ZP_06631019.1| polyprenyl synthetase family protein [Enterococcus faecalis R712]
 gi|293388168|ref|ZP_06632690.1| polyprenyl synthetase family protein [Enterococcus faecalis S613]
 gi|312908285|ref|ZP_07767249.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910643|ref|ZP_07769484.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
 gi|256952008|gb|EEU68640.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
 gi|291077533|gb|EFE14897.1| polyprenyl synthetase family protein [Enterococcus faecalis R712]
 gi|291082408|gb|EFE19371.1| polyprenyl synthetase family protein [Enterococcus faecalis S613]
 gi|310625699|gb|EFQ08982.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
 gi|311289019|gb|EFQ67575.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
          Length = 326

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           +QT++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LQTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|222109984|ref|YP_002552248.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
 gi|221729428|gb|ACM32248.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
          Length = 327

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 16/202 (7%)

Query: 38  RLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           RL SA+       RY +  GGK++R  L+   +            + A +E IH  +L+H
Sbjct: 29  RLQSAVPLVGEVARYIISAGGKRLRPALLLLMSGALGYTGSQRFNLAAVVEFIHTATLLH 88

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRG+PT +  +    +++ G+ L T AF+++         ++R   +L+
Sbjct: 89  DDV--VDESTLRRGRPTANENFGNPASVLVGDFLYTRAFQMMVE-----TSSLRVMEILA 141

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              N+  +G +  Q+++  D  + E+    + + KT  L   +    A++A +    +  
Sbjct: 142 EATNVIAEGEVQ-QLMNTHDASLSESGYLNVIRSKTAKLFEASARLAAVLAASPPEIEHA 200

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
              +G+ LG  FQ+ DD+LD +
Sbjct: 201 CASYGQALGTAFQVIDDVLDYD 222


>gi|325925951|ref|ZP_08187318.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans
           91-118]
 gi|325543616|gb|EGD15032.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans
           91-118]
          Length = 332

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + AS   +++L  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|225849175|ref|YP_002729339.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644434|gb|ACN99484.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 317

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 19/194 (9%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R +LV + AS+    N      + +A+E +H  SL+HDD+  +D    RRG+ T 
Sbjct: 35  GGKRVRPYLVLKFASMIRGYNKEEDYILASALEYLHTASLLHDDV--VDESEKRRGRLTA 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +   T ++ G+ +   A  + S         I   + +    +  ++ M  GQ+L++
Sbjct: 93  NRVFGNDTTVLVGDYMYANALYLFS---------IYGDIDMIKNVSDSVKKMAEGQLLEL 143

Query: 168 Q-----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +     D   D+   + I   KT  L    C  G  +A   +N KE    +G NLG+ FQ
Sbjct: 144 KKIANFDTTFDD--YYKIVLGKTAVLFGSCCYVGTALASEDKNLKENAYQYGVNLGVAFQ 201

Query: 223 LADDLLDCEEDLPK 236
           + DD+LD E D  K
Sbjct: 202 IVDDILDYEGDEEK 215


>gi|307595875|ref|YP_003902192.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551076|gb|ADN51141.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 343

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           Q   ++  + ++    A+ Y +  GGK++R  +    A     ++  AL   A +E IH 
Sbjct: 18  QLIKYLSKEVSEEFRDAVIYQVSTGGKRLRPLITLTAARACGGDYRVALPAAAIVELIHN 77

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLI+DD+  +D   +RR KPTV  +Y +  AI+ G     +  E I     + +D I  
Sbjct: 78  YSLIYDDI--IDEALLRRNKPTVRAKYGDYAAILIG----IWYREAIEEAILETRDPIAF 131

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ----------------------K 182
               + T    ++ +  G+ LDI  E+      + ++                       
Sbjct: 132 ARETANT----IRAIDEGERLDILLEYAGRRDPYFVENRLGPRLLSNWEALYNTYVKMIS 187

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +KT AL+  A   GA+ A+A    K  L  +G  LG+ FQ+ DD+LD   D+ K
Sbjct: 188 LKTAALIRTAAVFGAMSANAPHCIKP-LSDYGTYLGLAFQVLDDILDIFGDVKK 240


>gi|78048606|ref|YP_364781.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037036|emb|CAJ24768.1| Octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 332

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + AS   +++L  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|255318820|ref|ZP_05360046.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82]
 gi|262378919|ref|ZP_06072076.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164]
 gi|255304076|gb|EET83267.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82]
 gi|262300204|gb|EEY88116.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164]
          Length = 325

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 20/191 (10%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L        N+ H  A ++ A IE +H  +L+HDD+  +D   +RRG+P
Sbjct: 46  GGKRMRPIMCLLAAYACGETNLKH--AQKLAAIIEMLHTATLVHDDV--VDESGLRRGRP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T +  ++  TA++ G+ L+  AF+++        DN    ++L    + G   +  G++L
Sbjct: 102 TANATWNNQTAVLVGDFLIARAFDLLVD-----LDN----MILLKDFSTGTCEIAEGEVL 152

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            +Q +   D T+   +Q +  KT  L   A E  AI+A   +  +E LR F  + G  FQ
Sbjct: 153 QLQAQHQPDTTEAVYLQIIHGKTSRLFELATEGAAILAGKPEY-REPLRRFAGHFGNAFQ 211

Query: 223 LADDLLDCEED 233
           + DD+LD   D
Sbjct: 212 IIDDILDYTSD 222


>gi|313631736|gb|EFR98936.1| heptaprenyl diphosphate synthase component 2 [Listeria seeligeri
           FSL N1-067]
          Length = 291

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 99/185 (53%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 11  GGKLLRPAFALLSAQAGPDFDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 68

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI        + NI  + +L G++  +
Sbjct: 69  HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIEFN-----SKNI--EKILMGELDQM 120

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  + +D T    + ++  KT  L   +C SGA  + AS+    +    G  LG+ FQ+ 
Sbjct: 121 RTSYKMDVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQII 180

Query: 225 DDLLD 229
           DD+LD
Sbjct: 181 DDVLD 185


>gi|88859033|ref|ZP_01133674.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas tunicata
           D2]
 gi|88819259|gb|EAR29073.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas tunicata
           D2]
          Length = 323

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          + + A +E IH  +L+HDD+  +D   +RRG  T +
Sbjct: 43  GGKRVRPMLSILSAKALGYEGDAHITLAAIVEFIHTATLLHDDV--VDESDLRRGNATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF+++        + +R   +L+   N+  +G +  Q+++  
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLMVGL-----EEMRVMKILADATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  A++       +E+L+ +G +LG  FQL DD+L
Sbjct: 155 DPDTTEQSYMQVIYSKTAKLFEAATQLAAVITRKDAATEEQLKLYGMHLGTAFQLVDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|291612793|ref|YP_003522950.1| trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1]
 gi|291582905|gb|ADE10563.1| Trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1]
          Length = 320

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F         + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 41  GGKRLRPALVLLSAQAFGYGGKHHHDLAAVVEFIHTATLLHDDV--VDESELRRGRETAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++          +R    L+   N+  +G +  Q+L+  
Sbjct: 99  ALFGNAASVLVGDFLYSRSFQMMVDVG-----EMRVMQTLADATNVIAEGEVL-QLLNCH 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +D      +   KT  L   A   GAI+  AS  ++E    +G +LG  FQL DD+L
Sbjct: 153 DASVDIPNYMRVIHCKTAKLFEAAMRLGAILGKASTADEEAAAKYGMHLGTAFQLIDDVL 212

Query: 229 DCEED 233
           D   D
Sbjct: 213 DYSAD 217


>gi|254439146|ref|ZP_05052640.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
 gi|198254592|gb|EDY78906.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
          Length = 286

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 21/224 (9%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + +D  +D LLL  +S        R+  A RY    GG ++R+ L  + A+  N++   +
Sbjct: 16  RDVDAQIDRLLLPNSS--------RVADAARYHFSAGGARVRARLGLDAAAALNLSPQAS 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A E +H  SL+HDDL   D   +RRGKP+V  ++ +  AI  G+ L++ A+  I+
Sbjct: 68  LACAIAPELLHNASLVHDDL--QDGDAMRRGKPSVWSRFGKDIAISTGDLLISAAYMAIA 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +       +    L L   H+  L   + GQ  D +           I   K+G L+   
Sbjct: 126 A-------HPYPALALRAMHDAVLY-TIDGQTQDCRSTQPTPEAYVNIAANKSGPLLALP 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                I A A    +E +   G  L + +Q  DD++D  +DL K
Sbjct: 178 IRLALIAAQAPG--QETVVHAGRALAVAYQTLDDIMDRADDLAK 219


>gi|330927830|ref|XP_003302019.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1]
 gi|311322852|gb|EFQ89885.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1]
          Length = 385

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 91/162 (56%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RR  P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 127 RLAEITELIHTASLLHDDV--IDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALA- 183

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187
              +L+D   ++L+ ++  N+ ++G         +DE    + ++T  + +QK  +K+ +
Sbjct: 184 ---RLRDPEVTELLATVIANL-VEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSAS 239

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + AI+  ++ +  E    +G+NLG+ FQL DD+LD
Sbjct: 240 LISKSCRAAAILGGSTPDVVEAAYLYGKNLGLAFQLVDDMLD 281


>gi|12231186|dbj|BAB20977.1| putative GGPP synthase [Lactuca indica var. laciniata]
          Length = 126

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT HI Y E  A++AG+ LL+++FE I++    +  +   + +  L   IG 
Sbjct: 1   NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIATATKGVSSDRILRAIGELAKCIGS 60

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++D+  E  D     +  I   KT AL+  +   GAIM   S  E E+LR F 
Sbjct: 61  EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120

Query: 215 ENLGII 220
            ++G++
Sbjct: 121 RSIGLL 126


>gi|284032149|ref|YP_003382080.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
 gi|283811442|gb|ADB33281.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
          Length = 368

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 11/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H +SL+HDD+  MD    RR + T    +    AI+AG+ LL+ AF+++ S      
Sbjct: 114 ELVHNFSLLHDDV--MDCDTTRRHRATAWTVFGLGPAILAGDALLSLAFDVLVSSGEPAA 171

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196
           D+    L         +Q ++ GQ+ D   E  ++   ++   + ++KTGAL+  +   G
Sbjct: 172 DDGAKVL------GQAVQELVEGQLADAHFEIRNDVTLSECLRMAQLKTGALLGCSTALG 225

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A+       + + LR FGE+LG+ +Q  DDLL
Sbjct: 226 AMFGGGRSEQVDHLRLFGEDLGLAYQYVDDLL 257


>gi|325094604|gb|EGC47914.1| decaprenyl-diphosphate synthase subunit [Ajellomyces capsulatus
           H88]
          Length = 522

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   ++ 
Sbjct: 264 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALA- 320

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187
              +L+D    +L+ ++  N+ ++G    +   +  ++   F ++T  + +QK  +K+ +
Sbjct: 321 ---RLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 376

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 377 LISKSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLD 418


>gi|167044663|gb|ABZ09334.1| putative Polyprenyl synthetase [uncultured marine microorganism
           HF4000_APKG7H23]
          Length = 328

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 29/196 (14%)

Query: 45  YALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           YA++ GGKK+R  L    A     +    + +  A+E +H  SL+HDD  ++D+  IRRG
Sbjct: 45  YAVMSGGKKLRPALTLLSAQFHPHDPTAPIIMATAVELLHIASLVHDD--TVDSSTIRRG 102

Query: 104 KPTVHIQYDEVTAIIAGNGLL----TYA-----FEIISSPKTQLKDNIRSQLMLSLT-HN 153
           + TV  ++    A++ G+ L     TY        +I      + +  R +L    + HN
Sbjct: 103 RATVSSRWGGKVAVMLGDYLFATSATYVCDTGDIRVIRRFSEAIMELARGELSEHFSLHN 162

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
                     + D ++   D          KT +L C A E GA+++ AS++  + L+ +
Sbjct: 163 ------WDQTVADYEERTYD----------KTASLFCTASECGAVLSGASESHCQALKAY 206

Query: 214 GENLGIIFQLADDLLD 229
           G +LG+ FQ+ DD+LD
Sbjct: 207 GYHLGMAFQIMDDILD 222


>gi|261749413|ref|YP_003257099.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497506|gb|ACX83956.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 325

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 8/183 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR   V   A +            + IE IH  +L+HDD+  +DN Y+RRG  +++ 
Sbjct: 46  GKQIRPMFVFLIAKMLGTIQKKTYHTASLIELIHTATLVHDDV--IDNSYLRRGSFSINA 103

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+ +  + +         I  + +  ++    LQ M   + LDI +
Sbjct: 104 IWKNKIAVLVGDYLLSKSLLLATENNYHDLLKIICRTIKDMSEGELLQ-MEKSKKLDITE 162

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  ++     I   KT +L+  +CE GA   +A+++   ++R FG   GI FQ+ DDL D
Sbjct: 163 KIYNQ-----IIYHKTASLIAASCEGGARSVNANEDIALKMRKFGGLTGIAFQIKDDLFD 217

Query: 230 CEE 232
             E
Sbjct: 218 YNE 220


>gi|114566224|ref|YP_753378.1| trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337159|gb|ABI68007.1| Trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 322

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 23/224 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           QE SK++D+ ++ LL ++A H        L+ A      GGK++R       A  +  + 
Sbjct: 19  QELSKKLDSRIE-LLNESAVH--------LIKA------GGKRLRPAFALLSAHFYMDDL 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              + +   +E IH  SL+HDD+  +DN   RRG  TV   +    +I AG+ +   A  
Sbjct: 64  TEVIPLAVGLELIHMASLVHDDV--IDNSQTRRGTETVKSAWGNRVSIYAGDFIFARALS 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           +I++ +     ++ ++  + +     +Q      M+   +  +         + KT  L+
Sbjct: 122 LIATYERSNVVDVLAEASMKICEGEIIQ------MMSCYNVKLGLKNYLRRIERKTALLI 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +C+ GA++A+A + E   LR +G  LG+ FQ+ DD+LD   D
Sbjct: 176 SVSCQLGAMIANAPEQEVRALRNYGYYLGMAFQVTDDILDIIAD 219


>gi|225555298|gb|EEH03590.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus
           G186AR]
          Length = 521

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 88/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   ++ 
Sbjct: 263 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALA- 319

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187
              +L+D    +L+ ++  N+ ++G    +   +  ++   F ++T  + +QK  +K+ +
Sbjct: 320 ---RLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 375

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 376 LISKSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLD 417


>gi|219125696|ref|XP_002183110.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405385|gb|EEC45328.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 309

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 24/185 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+ R  +V   A        TA ++G  +E IH  SLIHDD+  +D    RRG   VH 
Sbjct: 39  GKRFRPTIVQLMAK-------TA-QLGQIVEMIHVASLIHDDV--LDEADTRRGGEAVHK 88

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ LL  A  +++    +L++    Q+M +      L+ ++ G+++ ++ 
Sbjct: 89  LYSNKVAVLAGDYLLARASVLLA----RLENTAVVQVMAT-----ALESLVAGEIMQLKS 139

Query: 170 --EFIDETQVFMIQK-MKTGALMCFACESGAIMAHASQNEKERLRC--FGENLGIIFQLA 224
             E + E + ++ +   KT +L+C+AC S A++   +        C  FG +LG+ +Q+ 
Sbjct: 140 PAESLLEMESYLRKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHLGLAYQIQ 199

Query: 225 DDLLD 229
           DD+LD
Sbjct: 200 DDILD 204


>gi|297844640|ref|XP_002890201.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336043|gb|EFH66460.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 865

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+G  IE IH  SLIHDD+  +D   +RR
Sbjct: 583 GGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRR 640

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 641 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLQVIKLISQV-IKDFASG 691

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F   ++     +    KT +L+  + +  AI +       E++  FG+NLG+
Sbjct: 692 EIKQASSLFDCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEVAEQMYQFGKNLGL 751

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 752 SFQVVDDILD 761


>gi|50085967|ref|YP_047477.1| octaprenyl-diphosphate synthase [Acinetobacter sp. ADP1]
 gi|49531943|emb|CAG69655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter sp. ADP1]
          Length = 325

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A       L   R + A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAAKACGSTDLEQHRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  ++  TA++ G+ L++ AF+++      L D     ++L    + G   +  G++L +
Sbjct: 104 NATWNNQTAVLVGDFLISRAFDLL----VDLND-----MVLLKDFSTGTCEIAEGEVLQL 154

Query: 168 QDEFIDET--QVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q +   ET  Q ++ I   KT  L   A E  AI++  +   +E LR F  + G  FQ+ 
Sbjct: 155 QSQHDPETTEQTYLNIIHGKTSRLFELATEGAAILS-GTPEYREPLRHFAGHFGNAFQII 213

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 214 DDILDYTSD 222


>gi|21243633|ref|NP_643215.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21109209|gb|AAM37751.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 332

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + AS   +++L  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGASAQVQQQLYDYGMQLGFAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|254468498|ref|ZP_05081904.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13]
 gi|207087308|gb|EDZ64591.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13]
          Length = 327

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKK+R   +   A L         ++ A +E IH  +L+HDD+  +D+   RR  PT +
Sbjct: 48  GGKKMRPQCLINLAGLAGGVKDIHYQLAAIVEFIHTATLLHDDV--VDDSDTRRSSPTAN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           IQ+    +I+ G+ + + +F+++        DNI    +L+ T N   +G +  Q+++  
Sbjct: 106 IQFGNSASILVGDFIYSRSFQMMVEL-----DNIEIMDILAYTTNKIAEGEVL-QLINKN 159

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I +   F + K KTG L     +   I    + N+K  L   G+  G I+QL DD+L
Sbjct: 160 NFDISQDNYFKVIKAKTGVLFEACGKLACIANKCTLNQKTSLSLIGKIFGEIYQLIDDVL 219

Query: 229 DCEEDLPK 236
           D   D+ K
Sbjct: 220 DYSGDVAK 227


>gi|323495811|ref|ZP_08100879.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326]
 gi|323319027|gb|EGA71970.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326]
          Length = 323

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 10/206 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q   +  L++ + + ++  GGK+IR  L    A              A IE IH  +L
Sbjct: 22  HAQLNSDVSLINQLGFYIISGGGKRIRPMLAVLSARALGYQGNAHTTAAAFIEFIHTATL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   +
Sbjct: 82  LHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKL 134

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  A ++ +
Sbjct: 135 MSDAVNVIAEGEVQ-QLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPEDVE 193

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L+ +G+ LG  FQL DD++D   D
Sbjct: 194 RALQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|296392961|ref|YP_003657845.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985]
 gi|296180108|gb|ADG97014.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985]
          Length = 340

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 21/185 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GK  RS L  E AS+ +  H+T     A+    AIE IH + LIHDD+  MD    RRG+
Sbjct: 53  GKIARSRLCAELASMVDGPHVTIPRERAITAATAIEMIHNFGLIHDDI--MDQDEERRGR 110

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             V + Y    AI+ G+ LL  A +I +S   T++ D            N  +  ++ GQ
Sbjct: 111 KAVWVAYGTGMAILLGDILLATAVKIAASVGNTRIAD----------IFNQAIGKLIEGQ 160

Query: 164 MLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           +LD+    I  T  +++ I + KT +L   A  S A +A  +Q + E +  F  + G+ F
Sbjct: 161 LLDMGSN-IGTTLEELWGIAEKKTASLFELAAMSIAELACVTQRQGEAMESFSRHYGVAF 219

Query: 222 QLADD 226
           Q  +D
Sbjct: 220 QYMND 224


>gi|159184398|ref|NP_353656.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str.
           C58]
 gi|159139711|gb|AAK86441.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str.
           C58]
          Length = 338

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++   QV    + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 175 DDYL---QVI---RAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|237809123|ref|YP_002893563.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187]
 gi|237501384|gb|ACQ93977.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187]
          Length = 323

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + + Q +  L++ + Y ++  GGK+IR  L    A          + +   IE IH  +L
Sbjct: 22  YQRLQSDVALVNQLAYYIISGGGKRIRPLLAVLSARAIGYQGDAHISLATIIEFIHTATL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRG+ T +  +    +++ G+ L T AF+++         N+R   +
Sbjct: 82  LHDDV--VDESVLRRGRDTANQLFGNAASVLVGDFLHTRAFQMMVELG-----NMRIMQL 134

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           LS   N+  +G +  Q+++  D    E     +   KT  L   A    AI+A+   + +
Sbjct: 135 LSEATNLIAEGEVM-QLMNCNDPSTTEDNYLQVIYCKTAKLFEAATHCAAILANQPAHIE 193

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           + LR +G+ LG  FQL DD++D
Sbjct: 194 QALRDYGKYLGTAFQLIDDVMD 215


>gi|112950409|gb|ABI26723.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
          Length = 358

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 77  GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 194

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 195 DDYL------QVIRAKTAALFAAAAEVGPIVAKTDKATRSALKSYGMNLGLAFQLVDDVL 248

Query: 229 D 229
           D
Sbjct: 249 D 249


>gi|108757727|ref|YP_631865.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622]
 gi|108461607|gb|ABF86792.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622]
          Length = 332

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 18/199 (9%)

Query: 36  NDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            D L+ A R+  LG   K+ R  L         V     + V  A E IH  SL+HDD+ 
Sbjct: 33  GDTLMEAARHLCLGSGSKRARPMLARLFGGAVGVPAERLVDVAVAAELIHSASLLHDDV- 91

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD---NIRSQLMLSL 150
            +D G  RRG+PTV+ ++  + A+++G+ +L+     +S    +L     ++ S++  + 
Sbjct: 92  -VDAGMFRRGRPTVNARWGNIVAVMSGDLILSTGLFQLSQLDARLTRSALSVVSEMTRAA 150

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              +  +G          D  +   ++  I + KTG+L  +   + A +A   +   ER 
Sbjct: 151 IAEVEARG----------DLDLPLNRLRFIAEGKTGSLFGWCGNAAATLAEHPE-AVERF 199

Query: 211 RCFGENLGIIFQLADDLLD 229
             FG +LG+ FQ+ADD+ D
Sbjct: 200 DGFGRHLGVAFQIADDIRD 218


>gi|300702983|ref|YP_003744585.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957]
 gi|299070646|emb|CBJ41941.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957]
          Length = 322

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 95/183 (51%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  ++   A+   +  NH   L   A +E IH  +L+HDD+  +D   +RRG+ T
Sbjct: 43  GGKRLRPVILLLMANALGYRGNHHHEL--AAVVEFIHTATLLHDDV--VDESELRRGRQT 98

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +    +++ G+ L + AF+++        D++R   +L+   N+  +G +  Q+L+
Sbjct: 99  ANAVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + D  + E +   + + KT  L   A + GA+++ A    +     +G  +G  FQ+ DD
Sbjct: 153 MHDPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDD 212

Query: 227 LLD 229
           LLD
Sbjct: 213 LLD 215


>gi|189192558|ref|XP_001932618.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187974224|gb|EDU41723.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 385

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 92/166 (55%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RR  P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 127 RLAEITELIHTASLLHDDV--IDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALA- 183

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L+D   ++L+ ++  N     ++ G+ + +++         + ++T  + +QK  +
Sbjct: 184 ---RLRDPEVTELLATVIAN-----LVEGEFMQLKNTARDDKNPAWTEDTVSYYLQKTYL 235

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K+ +L+  +C + AI+  ++ +  E    +G+NLG+ FQL DD+LD
Sbjct: 236 KSASLISKSCRAAAILGGSTPDVVEAAYLYGKNLGLAFQLVDDMLD 281


>gi|37903500|gb|AAP56240.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
          Length = 358

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 77  GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 194

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 195 DDYL------QVIRAKTAALFAAAAEVGPIVAKTDKATRSALKSYGMNLGLAFQLVDDVL 248

Query: 229 D 229
           D
Sbjct: 249 D 249


>gi|115523345|ref|YP_780256.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
 gi|115517292|gb|ABJ05276.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
          Length = 288

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 17/159 (10%)

Query: 38  RLLSAIRYALLG-GKKIRSFLV-TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RL  A+RY++   G ++R  L  +  A+    N       GAA+E +HC SL+HDDLP  
Sbjct: 26  RLAEAMRYSVFPRGARVRPRLCHSVAAACGEDNPAATEAAGAALELMHCASLVHDDLPCF 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLT 151
           D    RRG+P+VH  + E  A++ G+ L+  AF+ I+     P   LK      L +++ 
Sbjct: 86  DGADTRRGRPSVHKTFGEPLAVLTGDALIVLAFQTIARVDCDPARLLK------LTMTVG 139

Query: 152 HNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
             +G+  G++ GQ  + + E      +    + KTGAL 
Sbjct: 140 EAVGVPFGIVAGQAWECESEI----NLAHYHRSKTGALF 174


>gi|292656843|ref|YP_003536740.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2]
 gi|291372747|gb|ADE04974.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2]
          Length = 348

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 34/217 (15%)

Query: 37  DRLLSAIRYAL-LGGKKIR---SFLVTECASLFNVNHLT---------------ALRVGA 77
           +RL  A RY L  GGK++R   S L  E  SL +V  ++                +    
Sbjct: 35  ERLYEASRYLLKAGGKRLRPTVSLLTAE--SLADVEPMSEDYRAFPTLAGDPIDVMVAAV 92

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           +IE I  ++LIH     MD+  +RRG P VH +YD  TAI+AG+ L   AFE+++     
Sbjct: 93  SIEVIQSFTLIH--DDIMDDDDLRRGVPAVHKEYDNSTAILAGDTLYAKAFELLTKTGAD 150

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFA 192
             D + +   L+ T       +  GQ LDI  EF   T+V       + ++KT  L   A
Sbjct: 151 PADGLEAVRRLATTCT----QICEGQALDI--EFERRTEVLPDEYLQMVELKTAVLYGTA 204

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               A++  A     E L  +G   G  FQ+ DD+LD
Sbjct: 205 AAVPAVVMGADDEVVEALYQYGIASGSAFQIQDDVLD 241


>gi|297801684|ref|XP_002868726.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314562|gb|EFH44985.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 35/241 (14%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI------------RYALLGGKKIRS-- 55
           QE+ K I   L++L    A  +Q + ND LLS +            +    GGK++R   
Sbjct: 87  QESRKPIS--LENLFEVVADDLQ-RLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGL 143

Query: 56  -FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            FLV+   A L  +  LT    R+G  IE IH  SLIHDD+  +D   +RRGK TVH  +
Sbjct: 144 VFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRRGKETVHELF 201

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
               A++AG+ +   A   ++        N+ +  ++ L   + ++    G++      F
Sbjct: 202 GTRVAVLAGDFMFAQASWYLA--------NLENLQVIKLISQV-IKDFASGEIKQASSLF 252

Query: 172 ---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              ++     +    KT +L+  + +  AI +       E++  FG+NLG+ FQ+ DD+L
Sbjct: 253 DCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEVAEQMYQFGKNLGLSFQVVDDIL 312

Query: 229 D 229
           D
Sbjct: 313 D 313


>gi|271962169|ref|YP_003336365.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
           43021]
 gi|270505344|gb|ACZ83622.1| Trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 17/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R+ LV   A+ F       +  GA  IE  H  +L HDD+  MD   +RRG P+ 
Sbjct: 53  GGKRFRAMLVL-LAAQFGSPEAPGVVPGAVVIELTHLATLYHDDV--MDEAPVRRGSPSA 109

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++D   AI+ G+ L   A EI++       D IR Q             ++ GQ+ + 
Sbjct: 110 NARWDNTVAILTGDYLFAQASEILADLGA---DVIRIQAQT-------FSRLVRGQIRET 159

Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                 E  V     +   KTG+L+  +   GA+++ AS    +RL    E +G+ +QL 
Sbjct: 160 IGPRPGEDHVAHYIDVLADKTGSLIATSGRFGALLSGASPEIVDRLTRACEAIGVGWQLG 219

Query: 225 DDLLDCEED 233
           DDLLD   D
Sbjct: 220 DDLLDVASD 228


>gi|300690362|ref|YP_003751357.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07]
 gi|299077422|emb|CBJ50048.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07]
          Length = 322

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPVILLLMANALGYRGKHHHELAAVVEFIHTATLLHDDV--VDESELRRGRRTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        D++R   +L+   N+  +G +  Q+L++ 
Sbjct: 101 AVFGNAASVLVGDFLYSRAFQMMVQ-----ADSMRVMQILADATNVISEGEVL-QLLNMH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA+++ A    +     +G  +G  FQ+ DDLL
Sbjct: 155 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|167630030|ref|YP_001680529.1| heptaprenyl diphosphate synthase component ii, putative
           [Heliobacterium modesticaldum Ice1]
 gi|167592770|gb|ABZ84518.1| heptaprenyl diphosphate synthase component ii, putative
           [Heliobacterium modesticaldum Ice1]
          Length = 320

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V       N      L +  A+E IH  +L+HDD+  +D    RRG PTV 
Sbjct: 42  GGKRLRPAFVLLAGKFHNYALERLLPLAVALELIHMATLVHDDV--VDESKTRRGIPTVR 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI---GLQGMLGGQML 165
            ++    ++  G+ L   +  +IS    +L D   + ++  ++  +    +Q M      
Sbjct: 100 ARWGNRISLHTGDHLFARSLLLIS----ELNDPAMTAVLAKISVEMCEGEIQQMEA--TY 153

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+   F D   ++ I++ KT  L+  +C+ GA+   A  +    L+ +G +LG+ FQ+ D
Sbjct: 154 DVHQTFRD--YLYRIKR-KTALLIAASCQLGAMAVKADPSAVRALKMYGHHLGMAFQITD 210

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 211 DILDMTAD 218


>gi|254389005|ref|ZP_05004236.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|197702723|gb|EDY48535.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 389

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 82/187 (43%), Gaps = 19/187 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+    A+E  H +SL+HDD+  +D    RR +PT   
Sbjct: 105 GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 162

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +    AIIAG+ L++ A  I++    P +       S  M+ L           GQ  D
Sbjct: 163 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIELC---------AGQQAD 213

Query: 167 IQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              E     +V + +       KTGAL+  +C  GA+ A A       L  FG   G+ F
Sbjct: 214 CAFEGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAF 273

Query: 222 QLADDLL 228
           QL DDL+
Sbjct: 274 QLIDDLI 280


>gi|169600423|ref|XP_001793634.1| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15]
 gi|160705435|gb|EAT89776.2| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15]
          Length = 292

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RR  P+ +I++    A++AG+ LL  A    S 
Sbjct: 34  RLAEITELIHTASLLHDDV--IDHSISRRSAPSANIEFGNKMAVLAGDFLLGRA----SV 87

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQK--MKTGA 187
              +L+D   ++L+ ++  N+ ++G         +DE    + ++T  + +QK  +K+ +
Sbjct: 88  ALARLRDPEVTELLATVIANL-VEGEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSAS 146

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + AI+  ++    E    +G+NLG+ FQL DD+LD
Sbjct: 147 LISKSCRAAAILGGSTPEVVEAAYLYGKNLGLAFQLVDDMLD 188


>gi|28377915|ref|NP_784807.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum WCFS1]
 gi|254556099|ref|YP_003062516.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum JDM1]
 gi|308180094|ref|YP_003924222.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270749|emb|CAD63654.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum WCFS1]
 gi|254045026|gb|ACT61819.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum JDM1]
 gi|308045585|gb|ADN98128.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 325

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 27/207 (13%)

Query: 36  NDR---LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAA-IECIHCYSLIHD 90
           NDR   LL+A      GGK +R        S F  +H TA LR GAA +E +H  +LIHD
Sbjct: 35  NDRVHDLLAA------GGKFLRPGFFY-LFSQFGPDHNTARLRAGAAAMELLHVATLIHD 87

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLS 149
           D+  +D    RR   T+H  Y +  AI AG+ L T  F +++ + KT   D+++      
Sbjct: 88  DV--IDESPERRHVTTIHQDYGQRNAIYAGDLLFTCYFDQVLIAAKT--ADDVK------ 137

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNE 206
             +   ++ +L G++  +   F   T V     I + KT  L   +CE GA  A A  + 
Sbjct: 138 -INTAAMRAILQGELDQMAHNFDPTTTVDDYLAIARGKTARLFSLSCEQGAHFAGADASV 196

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
            +  +  GE +G+ +Q+ DD+LD   D
Sbjct: 197 VKLAQQIGERMGLAYQMLDDVLDYAGD 223


>gi|302523893|ref|ZP_07276235.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
           AA4]
 gi|302432788|gb|EFL04604.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
           AA4]
          Length = 347

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 26/219 (11%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           ++T+L D++    S +   H+    +A+     GGK+ R       A          L  
Sbjct: 43  VETMLRDVV---KSDVPAVHD----AALHLVEAGGKRFRPLFTLLSAQFGPKQGEQVLVA 95

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E +H  +L HDD+  MD   +RRG  +V+ ++D   AI+ G+ L  +A  +++   
Sbjct: 96  AAAVELVHLATLYHDDV--MDEATMRRGAESVNSRWDNTVAILTGDYLFAHASRLVA--- 150

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC 190
                ++ +     +    G   ++ GQM +       D+ ++     + QK  TG+L+ 
Sbjct: 151 -----DLGTDAARIIAETFG--ELVSGQMRETVGPGPGDDPVEHYLTVIAQK--TGSLIA 201

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +   G +M+ A++   + LR FG+ +G  FQ++DD++D
Sbjct: 202 TSGRFGGMMSGAAEEHIQALRRFGDIIGAAFQISDDVID 240


>gi|262164113|ref|ZP_06031852.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus VM223]
 gi|262027641|gb|EEY46307.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus VM223]
          Length = 323

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        NH TA    A IE IH 
Sbjct: 22  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSNHTTA---AAFIEFIHT 78

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 79  ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKI 131

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|255671648|gb|ACU26409.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured bacterium
           HF186_25m_30B18]
 gi|255671718|gb|ACU26476.1| geranylgeranyl pyrophosphate synthase [uncultured bacterium
           HF186_25m_13D19]
          Length = 356

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 25/212 (11%)

Query: 31  MQTQH---NDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           +QT H   N+ L S  +++   GGK++R+ +V E A       +T + + AA E +H  +
Sbjct: 45  LQTAHAHLNEPLRSMVVQHLQTGGKQVRARIVLEAARALGEEPMTLVPIAAACELLHNAT 104

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEIISSPKTQLKDNIR 143
           L+HDDL   D   +RRG+P V +++ E  AI  G+ +L   T A E     +  L  ++R
Sbjct: 105 LVHDDL--QDGDTVRRGEPAVWVRHGEAQAINVGDAMLMLPTLALE-----QMLLMPSVR 157

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
             +  + T          GQ L+++     ++           K+G       E+ A+  
Sbjct: 158 WYIATAFTRRATETAC--GQALELELLGRGWLGRGPYLRAALGKSGPFFSLPIETAAL-- 213

Query: 201 HASQNEKERLRCFGE---NLGIIFQLADDLLD 229
            A+  +  R R  G+    LG +FQ+ DD+LD
Sbjct: 214 -AAGRQPTRARAIGDALLALGALFQIRDDVLD 244


>gi|149187005|ref|ZP_01865313.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21]
 gi|148829394|gb|EDL47837.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21]
          Length = 338

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   +     ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 57  GGKRLRPMLTLAGAELVGYSGTRHHKLAAAVEFIHTATLLHDDV--VDGSDLRRGKAAAN 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +     ++ G+ L + +FE+++        +++   +LS    I  +G +    L  Q
Sbjct: 115 IIFGNPATVLVGDFLFSRSFELMTE-----DGSLKVLKILSGASAIIAEGEV--DQLTAQ 167

Query: 169 DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +     Q ++ I + KT AL   A    A++A  S+ E++ L  +G NLG+ FQL DD 
Sbjct: 168 RKIDTSEQRYLHIIRAKTAALFAAASRIAAVVAECSEEEEQSLDEYGRNLGVAFQLVDDA 227

Query: 228 LDCEED 233
           LD + D
Sbjct: 228 LDYDSD 233


>gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
 gi|317116202|gb|ADU98690.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
          Length = 349

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+                + A +E IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 70  GGKRLRPALLLLTCGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTAN 127

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++         ++R   +L+   N+  +G +  Q+++  
Sbjct: 128 EAFGNPASVLVGDFLHTRSFQMMVE-----AGSMRILQVLADATNVIAEGEVQ-QLMNTH 181

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   +    AI+A ++ + ++    +G+ LG  FQ+ DD+L
Sbjct: 182 DASLDEAGYLHVIRSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVL 241

Query: 229 DCEED 233
           D + D
Sbjct: 242 DYDGD 246


>gi|296272185|ref|YP_003654816.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096360|gb|ADG92310.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 298

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 28/193 (14%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L  GK +RS L+ + A +    +  ++++ A +E IH  SL+HDD+  +D    RRG P+
Sbjct: 30  LATGKMLRSKLILKIAGI----NEESIKLCAIVEMIHAASLLHDDV--IDEATTRRGSPS 83

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQML 165
           V+  YD  TAI+ G+ L + AF  +S    ++  NI S +  LS+           G+M+
Sbjct: 84  VNALYDAKTAIMFGDVLYSKAFTELSQMNKKVAYNISSAVTKLSI-----------GEMM 132

Query: 166 DIQDEFIDETQVF-----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           DI     D TQ F     +   M           S A  A  +  ++E+   +G+NLG+ 
Sbjct: 133 DI-----DLTQTFNTDYNLYLDMIYKKTASLIEASAASAAILANKDEEKYALYGKNLGLA 187

Query: 221 FQLADDLLDCEED 233
           FQ+ DD+LD  +D
Sbjct: 188 FQMIDDILDITQD 200


>gi|330901423|gb|EGH32842.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 262

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 8/159 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A IE +H  +L+HDD+  M    +RRG+ T +  +    +++ G+ L + +FE++   
Sbjct: 9   LAATIEFLHTATLLHDDVVDMSG--MRRGRSTANALWGNAPSVLVGDFLYSRSFEMM--- 63

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
             +L      +++   T  I    +L  Q+  I+D    E     + + KT  L   +  
Sbjct: 64  -VELGSMEVMKILSKATRIIAEGEVL--QLSKIRDASTTEETYMEVIRGKTAMLFEASTH 120

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           S A + +A Q + E LR FG++LG+ FQL DDLLD   D
Sbjct: 121 SAAALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGD 159


>gi|294814941|ref|ZP_06773584.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
 gi|294327540|gb|EFG09183.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 405

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 82/187 (43%), Gaps = 19/187 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+    A+E  H +SL+HDD+  +D    RR +PT   
Sbjct: 121 GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 178

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +    AIIAG+ L++ A  I++    P +       S  M+ L           GQ  D
Sbjct: 179 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIEL---------CAGQQAD 229

Query: 167 IQDEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              E     +V + +       KTGAL+  +C  GA+ A A       L  FG   G+ F
Sbjct: 230 CAFEGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAF 289

Query: 222 QLADDLL 228
           QL DDL+
Sbjct: 290 QLIDDLI 296


>gi|288965865|pdb|3LMD|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Corynebacterium Glutamicum Atcc 13032
 gi|317455534|pdb|3Q2Q|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Corynebacterium Glutamicum Complexed With Calcium
           And Isoprenyl Diphosphate
          Length = 360

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R       AS F    L+   ++    +E  H  +L HDD+  MD   +RRG P+
Sbjct: 73  GGKRFRPMFAL-LASEFGEKPLSENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPS 129

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + ++D   AI+AG+ LL +A  ++S    QL  +  +    +         ++ GQM +
Sbjct: 130 ANARWDNSVAILAGDILLAHASGLMS----QLGTDTVAHFAETFGE------LVTGQMRE 179

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +     D  + +  + + KTG L+  A   GA+ A A+    + L+ FG  +G+IFQ+ 
Sbjct: 180 TVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIV 239

Query: 225 DDLLDC 230
           DD++D 
Sbjct: 240 DDIIDI 245


>gi|19551716|ref|NP_599718.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|62389371|ref|YP_224773.1| octaprenyl-diphosphate synthase protein [Corynebacterium glutamicum
           ATCC 13032]
 gi|21323238|dbj|BAB97866.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41324705|emb|CAF19187.1| PUTATIVE OCTAPRENYL-DIPHOSPHATE SYNTHASE PROTEIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 350

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R       AS F    L+   ++    +E  H  +L HDD+  MD   +RRG P+
Sbjct: 71  GGKRFRPMFAL-LASEFGEKPLSENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPS 127

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + ++D   AI+AG+ LL +A  ++S    QL  +  +    +         ++ GQM +
Sbjct: 128 ANARWDNSVAILAGDILLAHASGLMS----QLGTDTVAHFAETFGE------LVTGQMRE 177

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +     D  + +  + + KTG L+  A   GA+ A A+    + L+ FG  +G+IFQ+ 
Sbjct: 178 TVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIV 237

Query: 225 DDLLDC 230
           DD++D 
Sbjct: 238 DDIIDI 243


>gi|254168668|ref|ZP_04875510.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
 gi|289596800|ref|YP_003483496.1| Polyprenyl synthetase [Aciduliprofundum boonei T469]
 gi|197622294|gb|EDY34867.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
 gi|289534587|gb|ADD08934.1| Polyprenyl synthetase [Aciduliprofundum boonei T469]
          Length = 350

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 29/204 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y L GGK+IR+ L+     +    +   ++  +++E I  Y LIHDD+  MD   +RRGK
Sbjct: 44  YTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLIHDDI--MDESDLRRGK 101

Query: 105 PTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
            TVH                I++ E  AIIAG+    YA EI+SS  +     ++ + + 
Sbjct: 102 DTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGDLANAYAMEILSS--SDFPAELKVKAIH 159

Query: 149 SLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACES-GAIMAHASQ 204
            L   I   G   GQ++DI     E   E  + ++ K KT         + G I+A    
Sbjct: 160 KLNEIIEYTGY--GQIIDIYSGALEEFKEEDLLLLHKYKTARYTIEGPLALGIILA---G 214

Query: 205 NEKERLRCFGENLGIIFQLADDLL 228
            E E +  +   +GI FQL DD+L
Sbjct: 215 KEPEGIENYAIPVGIAFQLQDDIL 238


>gi|145294625|ref|YP_001137446.1| hypothetical protein cgR_0576 [Corynebacterium glutamicum R]
 gi|140844545|dbj|BAF53544.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 350

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R       AS F    L+   ++    +E  H  +L HDD+  MD   +RRG P+
Sbjct: 71  GGKRFRPMFAL-LASEFGEKPLSENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPS 127

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + ++D   AI+AG+ LL +A  ++S    QL  +  +    +         ++ GQM +
Sbjct: 128 ANARWDNSVAILAGDILLAHASGLMS----QLGTDTVAHFAETFGE------LVTGQMRE 177

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +     D  + +  + + KTG L+  A   GA+ A A+    + L+ FG  +G+IFQ+ 
Sbjct: 178 TVGPRDTDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIV 237

Query: 225 DDLLDC 230
           DD++D 
Sbjct: 238 DDIIDI 243


>gi|326443312|ref|ZP_08218046.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 343

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 83/187 (44%), Gaps = 19/187 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+    A+E  H +SL+HDD+  +D    RR +PT   
Sbjct: 59  GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +    AIIAG+ L++ A  I++    P +       S  M+ L           GQ  D
Sbjct: 117 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRLSACMIELC---------AGQQAD 167

Query: 167 IQDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              E     +V + + +     KTGAL+  +C  GA+ A A       L  FG   G+ F
Sbjct: 168 CAFEGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAF 227

Query: 222 QLADDLL 228
           QL DDL+
Sbjct: 228 QLIDDLI 234


>gi|154286806|ref|XP_001544198.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1]
 gi|150407839|gb|EDN03380.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1]
          Length = 269

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 13/162 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A    S 
Sbjct: 83  RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRA----SV 136

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFMIQK--MKTGA 187
              +L+D    +L+ ++  N+ ++G    +   +  ++   F ++T  + +QK  +K+ +
Sbjct: 137 ALARLRDPEVIELLSTVIANL-IEGEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSAS 195

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 196 LISKSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLD 237


>gi|332702907|ref|ZP_08422995.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553056|gb|EGJ50100.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 334

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 20/187 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA            +  ++E +H  +L+HDD+  +D   +RRGK   H
Sbjct: 53  GGKRLRPVLAILCARALGHKGEAIYPLACSLEFLHSATLLHDDI--LDGAVLRRGKAAAH 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           I +    A++AG+ LL  A ++++S   P+            L+   +  +   + G++ 
Sbjct: 111 IVFSRTEAVLAGDVLLALANQLVASYGDPR------------LTTCLSEAIMRTVAGEVA 158

Query: 166 DIQD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +I +  E     + ++ I   KT  L+  +C  GA++A  S    +    FG N+GI FQ
Sbjct: 159 EIVNTREMDSSLETYLHIITGKTAYLLEASCVVGALLAGVSDELIKAASVFGLNMGIAFQ 218

Query: 223 LADDLLD 229
           + DD +D
Sbjct: 219 IVDDAMD 225


>gi|164690679|dbj|BAF98629.1| octaprenyl diphosphate synthase [Streptomyces argenteolus]
          Length = 357

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 18/246 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDL---LLQTASHM--------QTQHNDRLLSAIRYAL-LG 49
            GG  +  +E S  ID +L ++   +     HM        ++     +   + YAL   
Sbjct: 7   GGGQRALTEEASVSIDAVLKEMHGYVANARRHMTSAFDELAESWQTSPVRDVVHYALDEP 66

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  +          +     RV A IE  H  SL+HDDL  +D    RR  P+V  
Sbjct: 67  GKMIRPTITLAACQAVGGDPEMFGRVAAGIEYGHLASLMHDDL--IDEDATRRRIPSVWN 124

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDIQ 168
            +   +A+IAG+ LL  AF  ++  +    + I  +   ++T + G+    G  + + + 
Sbjct: 125 AFGVPSAVIAGDLLLFTAFHALACQQGVPAERI-VRTFEAVTRS-GVDACFGTSLEMALA 182

Query: 169 DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                 T+ ++ +   KTGA++    E GA++   S  +   LR +GE+LG+ FQ+ DD+
Sbjct: 183 GNISISTETYLKMAAGKTGAVLRGCSEGGAVIGGGSPRQIASLRDYGEDLGVAFQIIDDV 242

Query: 228 LDCEED 233
           L  E D
Sbjct: 243 LPYESD 248


>gi|28393675|gb|AAO42250.1| putative geranyl diphosphate synthase (GPPS)
           (dimethylallyltransferase) [Arabidopsis thaliana]
          Length = 322

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+G  IE IH  SLIHDD+  +D   +RR
Sbjct: 40  GGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRR 97

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+ TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 98  GRETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 148

Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F  + ++  +M++   KT +L+  + +  AI +       E++  FG+NLG+
Sbjct: 149 EIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGL 208

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 209 SFQVVDDILD 218


>gi|319778972|ref|YP_004129885.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
 gi|317108996|gb|ADU91742.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
          Length = 321

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+IR  ++   +       +++HL A    A IE IH  +L+HDD+  +D   +RRG 
Sbjct: 43  GGKRIRPAMLLMMSKALGYEGSLHHLMA----AVIEFIHTSTLLHDDV--VDESDMRRGS 96

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + +FE++        D++R   ++S    +  +G +  Q+
Sbjct: 97  ATANAVFGNAASVLVGDYLYSRSFEMMVEA-----DSMRIMQIMSEATTVIAEGEVL-QL 150

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L++ D  +D  +   + K KT  L   A    A++A A    +++   +G ++G  FQ+ 
Sbjct: 151 LNVHDPNVDFDRYMDVIKSKTAKLFEAATRVAAVLAGADDAVEQKAALYGTHVGTAFQVI 210

Query: 225 DDLLD---CEEDLPK 236
           DD+LD     EDL K
Sbjct: 211 DDVLDYSGSAEDLGK 225


>gi|224437780|ref|ZP_03658727.1| hypothetical protein HcinC1_07400 [Helicobacter cinaedi CCUG 18818]
          Length = 303

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 29/204 (14%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ND +L+ +   L  GK +RS L+   + +       +LR  A IE I   SL+HDD+  +
Sbjct: 23  NDEVLN-LSSHLSQGKMLRSKLLLAISGVSE----DSLRACALIEMIQSASLLHDDV--I 75

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNI 154
           D    RR KP+++  +    AI+ G+ L + AF  +S    +L  ++ S ++ LS+    
Sbjct: 76  DEAQTRRQKPSINALFGNKNAIMLGDVLYSKAFYELSCLDVRLAQSVSSAVVRLSI---- 131

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKER 209
                  G++ D+     F  + Q ++  KM   KT AL+  A E GAI+   ++N    
Sbjct: 132 -------GEIEDVSLASRFHIDKQAYI--KMCGNKTAALIVAAAECGAILKGLNKN---I 179

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
            R +GENLGI FQ+ DD+LD  +D
Sbjct: 180 YRIYGENLGIAFQIIDDILDFTQD 203


>gi|297192769|ref|ZP_06910167.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721043|gb|EDY64951.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 336

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 27/194 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
            ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L   
Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160

Query: 166 ------DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 D  D ++D      +   KTG+L+  +   GA+M+ A +   + L  +GE LG+
Sbjct: 161 GPRDGRDPVDHYLD------VMAGKTGSLVAVSVRFGAMMSGADERVVDTLTQYGERLGV 214

Query: 220 IFQLADDLLDCEED 233
            FQLADD+LD   D
Sbjct: 215 AFQLADDVLDIASD 228


>gi|251796421|ref|YP_003011152.1| trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2]
 gi|247544047|gb|ACT01066.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2]
          Length = 324

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 32/229 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-- 64
           S++++  +R  +  D+LL +T+ H        LL A      GGK++R   V        
Sbjct: 15  SRIEQELERSISFGDELLSETSLH--------LLKA------GGKRLRPVFVLLAGKFGQ 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           ++++ LT  +V   +E IH  SL+HDD+  +D+   RRG+ TV  ++D   A+  G+ + 
Sbjct: 61  YDLDKLT--KVAVPLELIHMSSLVHDDV--IDDASTRRGQLTVKSKWDNRIAMYTGDYIF 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ- 181
             A  I+    T+L D    Q MLS +    L  M  G+M  I+  F  E  +  ++++ 
Sbjct: 117 GRALTIV----TELDDPFIHQ-MLSKS----LVQMSIGEMEQIRYFFNTEQTIRDYLLRI 167

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           + KT  L+  +C+ GA  A A +    RL  +G N+G+ FQ+ DD+LD 
Sbjct: 168 RRKTALLIAISCQLGAAAAGADRATLNRLYRYGYNVGMTFQIRDDMLDL 216


>gi|218258587|ref|ZP_03474930.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225357|gb|EEC98007.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii
           DSM 18315]
          Length = 324

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 14/205 (6%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           A+ ++++ N RL SAI   L   GK IR  LV   A          +     +E +H  +
Sbjct: 23  AASLRSETN-RLQSAIDQILNASGKHIRPLLVLLAAKACGQVTDNTINSAVLLELLHTAT 81

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDD+  +D    RRG P+++  +D   +++ G+ +L+ A  +I S +T    N++   
Sbjct: 82  LIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GNLQ--- 131

Query: 147 MLSLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           ++ +  N+G     G   Q+   ++  IDE+    + + KT  L+    E G+I A AS 
Sbjct: 132 IIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQVIRKKTAMLLSACSEIGSISAGASG 191

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
              E+ R FGE LG  FQ+ DD+ D
Sbjct: 192 EMVEKCREFGEYLGYCFQIKDDIFD 216


>gi|225872538|ref|YP_002753993.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196]
 gi|225793159|gb|ACO33249.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196]
          Length = 307

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 2/182 (1%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G  IR+ L       +++    +  +  A+E  H  SL+ DDLP MD+  +RRG   +H 
Sbjct: 43  GNMIRAELAFRLGRSYDLPGACSEHLAIAVEYFHTASLLFDDLPCMDDATLRRGAACIHH 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            Y E  AI+    L+ +A+ ++           R++ +  + H +GL G+L GQ  D+  
Sbjct: 103 TYGEGAAILTALALVNHAYGLLWKGVAHSSAEARTRTLEYVEHQLGLAGLLNGQSRDLHM 162

Query: 169 DEFIDETQVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            E   + +++  I   KT +L+  A    AI   A + E+  L       G+ +Q+ DDL
Sbjct: 163 REASRQPRIYQQIAIGKTVSLIRMALVVPAIAGGAGEYEQCLLDRLAIAWGLSYQILDDL 222

Query: 228 LD 229
            D
Sbjct: 223 KD 224


>gi|330504899|ref|YP_004381768.1| polyprenyl synthetase [Pseudomonas mendocina NK-01]
 gi|328919185|gb|AEB60016.1| polyprenyl synthetase [Pseudomonas mendocina NK-01]
          Length = 322

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV                + A IE +H  +L+HDD+  M +  +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLSGRALGYQADDLRLLAATIEFLHTATLLHDDVVDMSD--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+    +++ G+ L + +FE++     +L      +++   T  I    +L  Q+  ++
Sbjct: 101 AQWGNAPSVLVGDFLYSRSFEMM----VELGSMPVMKILSHATRVIAEGEVL--QLSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  + A +A A++ ++E LR FG++LGI FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHAAAALAGANEAQREALRTFGDHLGIAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|300782468|ref|YP_003762759.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32]
 gi|299791982|gb|ADJ42357.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32]
          Length = 350

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R       A          +   AA+E +H  +L HDD+  MD   +RRG  +V+
Sbjct: 72  GGKRFRPLFTLLAAQFGPKQDDHVIVAAAAVELVHLATLYHDDV--MDEATMRRGAESVN 129

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   AI+ G+ L  +A  +++   T     I       +T          GQM +  
Sbjct: 130 ARWDNTIAILTGDFLFAHASRLVADLGTDAARIIAETFGELVT----------GQMRETV 179

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                +  V     +   KTG+L+  +   G +M+ A++   E LR FG+ +G  FQ++D
Sbjct: 180 GPGPGDDAVAHYLTVIAQKTGSLIATSGRFGGMMSGAAEEHIEALRRFGDIIGTAFQISD 239

Query: 226 DLLD 229
           D++D
Sbjct: 240 DIID 243


>gi|256425937|ref|YP_003126590.1| trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588]
 gi|256040845|gb|ACU64389.1| Trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588]
          Length = 321

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 15/188 (7%)

Query: 50  GKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK+IR   V   A LFN N   +  R  A +E +H  +L+HDD+  +D+   RRG  +++
Sbjct: 42  GKQIRPMFVLLSAKLFNNNIQESTYRAAALVELLHTATLVHDDV--VDDANERRGFFSIN 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ LL+    ++S    +     RS  +LS      ++ M  G++L I+
Sbjct: 100 ALWKNKIAVLVGDYLLSKGL-LLSVDNNEF----RSLKILSE----AVKEMSEGELLQIE 150

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                 I E   F I + KT +L+  AC +GA          E++R FGE +G+ FQ+ D
Sbjct: 151 KTRKLNIKEDIYFEIIRRKTASLLASACAAGAWSTTNDDETTEKMRLFGEKVGVAFQIKD 210

Query: 226 DLLDCEED 233
           DL D   D
Sbjct: 211 DLFDYGSD 218


>gi|296132634|ref|YP_003639881.1| Trans-hexaprenyltranstransferase [Thermincola sp. JR]
 gi|296031212|gb|ADG81980.1| Trans-hexaprenyltranstransferase [Thermincola potens JR]
          Length = 323

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 32/214 (14%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           + LL +T+ H+      RL  A  +ALL GK  +          +++  L  L V  A+E
Sbjct: 30  EKLLSETSGHLLNAGGKRLRPA--FALLAGKTFQ----------YDLEKLLPLAV--ALE 75

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  +L+HDD+  +D    RRG PTV  ++    ++  G+ +   +   I+        
Sbjct: 76  LIHMATLVHDDV--VDASVTRRGIPTVKAKWGNQVSVYTGDFIFGQSLIQIARCNNTKIA 133

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFMIQKMKTGALMCFACES 195
            I + + + ++          G+++ ++  F D  Q     +F I++ KT  L+  +CE 
Sbjct: 134 EILADVSVKMSE---------GEIVQLRTTF-DPKQSLRDYLFRIKR-KTALLISASCEL 182

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GA+ A A +N    LR +G  LG+ FQ+ DD+LD
Sbjct: 183 GALAAGAPENFIRALRWYGYYLGMAFQITDDILD 216


>gi|159470571|ref|XP_001693430.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii]
 gi|158282933|gb|EDP08684.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii]
          Length = 394

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 14/187 (7%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGKK+R    FLV  C A    +  LT    R+    E IH  SL+HDD+  +D   IRR
Sbjct: 112 GGKKLRPVIVFLVAHCTAQREGLTELTEKHRRLAEITEMIHTASLVHDDV--LDECDIRR 169

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T++  Y    A++AG+ L   +   +++      DN+    ++S        G +  
Sbjct: 170 GKQTINSMYGTRVAVLAGDFLFAQSSWFLAN-----LDNLEVIKLISQVIADFANGEIS- 223

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q   + D  I   Q       KT +L+  +C S A+ + +    KE +  +G++LG+ FQ
Sbjct: 224 QAASLFDTDITLEQYLDKSFYKTASLIAASCRSAAVFSDSPVEVKEAMYAYGKHLGLAFQ 283

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 284 VVDDILD 290


>gi|332528440|ref|ZP_08404432.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624]
 gi|332042119|gb|EGI78453.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624]
          Length = 316

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   +   +        + A +E IH  +L+HDD+  +D+  +RRG PT +
Sbjct: 30  GGKRLRPALLLLVSGALDYRGPHRHSLAAVVEFIHTATLLHDDV--VDDSKLRRGNPTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++   ++     +R   +L+   N+  +G +  Q++++ 
Sbjct: 88  ETFGNAASVLVGDFLYSRAFQMMVEAQS-----MRVMEVLAEATNVIAEGEVQ-QLMNMH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  ++E     + + KT  L   +   GAI+A A +  +     +G+ LG  FQ+ DD+L
Sbjct: 142 NADLNEAGYVHVIRSKTAKLFEASARCGAILAGADKTLEAACADYGQALGTAFQVIDDVL 201

Query: 229 DCEED 233
           D   D
Sbjct: 202 DYAGD 206


>gi|313144226|ref|ZP_07806419.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG
           18818]
 gi|313129257|gb|EFR46874.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG
           18818]
          Length = 297

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 29/204 (14%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ND +L+ +   L  GK +RS L+   + +       +LR  A IE I   SL+HDD+  +
Sbjct: 17  NDEVLN-LSSHLSQGKMLRSKLLLAISGVSE----DSLRACALIEMIQSASLLHDDV--I 69

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNI 154
           D    RR KP+++  +    AI+ G+ L + AF  +S    +L  ++ S ++ LS+    
Sbjct: 70  DEAQTRRQKPSINALFGNKNAIMLGDVLYSKAFYELSCLDVRLAQSVSSAVVRLSI---- 125

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKER 209
                  G++ D+     F  + Q ++  KM   KT AL+  A E GAI+   ++N    
Sbjct: 126 -------GEIEDVSLASRFHIDKQAYI--KMCGNKTAALIVAAAECGAILKGLNKN---I 173

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
            R +GENLGI FQ+ DD+LD  +D
Sbjct: 174 YRIYGENLGIAFQIIDDILDFTQD 197


>gi|330823512|ref|YP_004386815.1| trans-hexaprenyltranstransferase [Alicycliphilus denitrificans
           K601]
 gi|329308884|gb|AEB83299.1| Trans-hexaprenyltranstransferase [Alicycliphilus denitrificans
           K601]
          Length = 349

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+                + A +E IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 70  GGKRLRPALLLLTCGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTAN 127

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++         ++R   +L+   N+  +G +  Q+++  
Sbjct: 128 EAFGNPASVLVGDFLHTRSFQMMVE-----AGSMRILQVLADATNVIAEGEVQ-QLMNTH 181

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   +    AI+A ++ + ++    +G+ LG  FQ+ DD+L
Sbjct: 182 DASLDEAGYLHVIRSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVL 241

Query: 229 DCEED 233
           D + D
Sbjct: 242 DYDGD 246


>gi|20808838|ref|NP_624009.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|254478179|ref|ZP_05091561.1| polyprenyl synthetase superfamily protein [Carboxydibrachium
           pacificum DSM 12653]
 gi|20517490|gb|AAM25613.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|214035908|gb|EEB76600.1| polyprenyl synthetase superfamily protein [Carboxydibrachium
           pacificum DSM 12653]
          Length = 322

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 16/203 (7%)

Query: 32  QTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           + + +++L+S I   ++   GK +R   V   A   N +    L + AAIE +H  +L+H
Sbjct: 25  RVKSSNKLISDILLDMVNNSGKMLRPAFVIISAKFGNYDRKKILPLAAAIEMLHMATLVH 84

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +DN  IRR KPT+  +Y +  A+  G+ L + +F ++S       DNI    +  
Sbjct: 85  DDI--IDNALIRRSKPTIQAEYGKDYAVFIGDFLFSQSFLLLS-------DNINVANLKK 135

Query: 150 LTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNE 206
           ++  +    +  G++   +  + I+ T    ++++  KT AL   +   GA  ++  +  
Sbjct: 136 VSKVVS--RICKGEIDQFESRYDINITINDYLKRIAAKTAALFALSFYVGAYESNCGEEL 193

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            + L   G N+GI FQ+ DD+LD
Sbjct: 194 AKILGSIGYNIGIAFQIIDDILD 216


>gi|260775534|ref|ZP_05884431.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608715|gb|EEX34880.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 323

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 10/206 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q   +  L++ + + ++  GGK+IR  L    A              A IE IH  +L
Sbjct: 22  HAQLNSDVSLINQLGFYIISGGGKRIRPLLAVLSARALGYQGQAHTTAAAFIEFIHTATL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   +
Sbjct: 82  LHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKL 134

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   NI  +G +  Q+++  D    E     +   KT  L   A + GAI+  A    +
Sbjct: 135 MSDAVNIIAEGEVQ-QLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPSEVE 193

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L+ +G+ LG  FQL DD++D   D
Sbjct: 194 TALQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|163753001|ref|ZP_02160125.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1]
 gi|161326733|gb|EDP98058.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1]
          Length = 325

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 18/186 (9%)

Query: 50  GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R    FLV++  S   VN  T  R  + IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 45  GKQMRPMFVFLVSKMVSDGLVNDRT-YRGASVIELIHTATLVHDDV--VDDSNRRRGFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++  +    A++ G+ LL+    ++S       DN    L+  ++  + ++ M  G++L 
Sbjct: 102 INALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLKIIS--VAVREMSEGELLQ 152

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+      I E   + I + KT  L+   C  GA   +AS  E E LR FGE +G+ FQ+
Sbjct: 153 IEKARKLDITEDVYYEIIRQKTATLIAACCAMGAKSVNASDEEVENLRLFGEYIGMAFQI 212

Query: 224 ADDLLD 229
            DDL D
Sbjct: 213 KDDLFD 218


>gi|332188683|ref|ZP_08390398.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
 gi|332011300|gb|EGI53390.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
          Length = 336

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L      +   + AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 55  GGKRMRPMLTLASAQLLGYRGTSHHVLAAAVEFIHTATLLHDDV--VDGSDLRRGRRTAN 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L + +F+++    +    NI     LS    +  +G +  Q+  ++
Sbjct: 113 IIWGNPASVLVGDFLFSRSFQLMVDAGSLKVLNI-----LSGASAVIAEGEVN-QLTAVR 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              + E +   I   KT AL   AC   A++A   + E+  L  +G NLGI FQL DD +
Sbjct: 167 QVGLPEERYLSIIDAKTAALFAAACRIAAVVAERPEAEELALEAYGRNLGIAFQLIDDAI 226

Query: 229 DCEED 233
           D   D
Sbjct: 227 DYVSD 231


>gi|254523411|ref|ZP_05135466.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14]
 gi|219721002|gb|EED39527.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14]
          Length = 332

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV               ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAVGHAGPDHHQLAAIIEFIHTSTLLHDDV--VDESNLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L+     Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELERMPVMQILADATNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DET    + + KT  L       GA+ +   +  ++ L  +G +LG  FQ+ADD+L
Sbjct: 165 NPDTDETAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|5734760|gb|AAD50025.1|AC007651_20 Very similar to prenyl transferase [Arabidopsis thaliana]
          Length = 379

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+G  IE IH  SLIHDD+  +D   +RR
Sbjct: 97  GGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRR 154

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+ TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 155 GRETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 205

Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F  + ++  +M++   KT +L+  + +  AI +       E++  FG+NLG+
Sbjct: 206 EIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGL 265

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 266 SFQVVDDILD 275


>gi|145300249|ref|YP_001143090.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853021|gb|ABO91342.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 323

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          L++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPMLTVMAARALGYEGQDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++S        N+R   +LS   N   +G +  Q+++  
Sbjct: 101 ALFGNAASVLVGDYLYSRSFQMMSELS-----NLRVMEILSDATNTIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++ H  +  ++ +  +G+ LG  FQ+ DD++
Sbjct: 155 DPDTTEQSYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVM 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|228470958|ref|ZP_04055803.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3]
 gi|228307355|gb|EEK16369.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3]
          Length = 318

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 18/190 (9%)

Query: 49  GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GK +R  +V  CA L     N  T L     IE +H  SLIHDD+  +D    RRG+PT
Sbjct: 37  SGKHVRPIIVGLCAQLCAGQTNERT-LAAALVIELLHTASLIHDDV--IDWSDTRRGQPT 93

Query: 107 VHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           ++  Y    A++ G+ +L+ AF EI+S           +Q ML +    G + +  G+++
Sbjct: 94  LNALYSNHQAVLMGDYVLSTAFLEIVSREH--------NQEMLRVVAQAG-RNLSIGELM 144

Query: 166 DI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            +   +     E   + +   KTG L   + + GA+  +A+  E ER    G+ +G  FQ
Sbjct: 145 QLSLSKAHTYREEDYYAVVDRKTGTLFEASAKLGALSVNATDEEVERCARLGQLMGRAFQ 204

Query: 223 LADDLLDCEE 232
           L DDL D ++
Sbjct: 205 LQDDLFDYDK 214


>gi|198274095|ref|ZP_03206627.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135]
 gi|198273173|gb|EDY97442.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135]
          Length = 326

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 10/184 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A LF   + +      ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 47  GKMMRPILVMLTAKLFGTLNESTFHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNA 104

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Y+   +++ G+ +L  + +  + + K +L      +L+ +L   +    +L  Q+ +I 
Sbjct: 105 IYNNKVSVLVGDYMLATSLKHAALTGKVEL-----VELVATLGQELSEGEIL--QLGNIG 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E   E   F + + KT AL   + +SGA+   A Q E  +    GE +GI FQ+ DD+ 
Sbjct: 158 KEDFSEEAYFDVIRKKTAALFKASSQSGAVSVGAVQEEVMKAGLLGEMIGIAFQIKDDIF 217

Query: 229 DCEE 232
           D  E
Sbjct: 218 DYFE 221


>gi|113869207|ref|YP_727696.1| trans-hexaprenyltranstransferase [Ralstonia eutropha H16]
 gi|113527983|emb|CAJ94328.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha H16]
          Length = 328

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A     +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRLRPVILLLTARAMGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++         ++R   +LS   N+  +G +  Q+L++ 
Sbjct: 107 AVFGNAASVLVGDFLYSRAFQMMVD-----AGSMRIMEILSNATNVIAEGEVL-QLLNMH 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + + KT  L   A + GA++A A    +E    +G  +G  FQL DD+L
Sbjct: 161 DPDVTVERYLQVIRYKTAKLFEAAAQLGAVLAGADAQMEEAAAEYGRRIGTAFQLIDDML 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|167764030|ref|ZP_02436157.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC
           43183]
 gi|167698146|gb|EDS14725.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC
           43183]
          Length = 324

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+N      L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLYNEICPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++ G+ LL  A   +           R+  ++ +   +G Q +  G++L   +
Sbjct: 103 VFNNKVAVLTGDYLLATALVEVGMT--------RNYGIIDIVSKLG-QDLAEGELLQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    E   F + + KT  L     ++GA+   A   + E  R FGE +G+ FQ+ DD
Sbjct: 154 VSNPEYSEDIYFDVIRKKTAVLFAACMKAGALSVGAGDEKAEYARLFGEYIGLCFQIKDD 213

Query: 227 LLDCEE 232
           + D  E
Sbjct: 214 IFDYYE 219


>gi|221633012|ref|YP_002522237.1| heptaprenyl diphosphate synthase component II [Thermomicrobium
           roseum DSM 5159]
 gi|221155353|gb|ACM04480.1| heptaprenyl diphosphate synthase component II [Thermomicrobium
           roseum DSM 5159]
          Length = 334

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 20/161 (12%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             A IE +H  SLIHDD  S+D   +RRG+PT++  +D    I+ G+ +   +  + +S 
Sbjct: 77  AAAGIELLHTASLIHDD--SLDGASVRRGQPTLNALFDPSVVIMVGDYMFARSAMLAAS- 133

Query: 135 KTQLKDNIRSQLMLSLTHNIG------LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
                  +  +++    H +G      L+ +   +  D+    +D+ Q  +  K  T +L
Sbjct: 134 ------TMNPRVLAVFAHCLGSICDGQLRELFAARRTDVS---LDDYQHRIYGK--TASL 182

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              + E GAI+A A  ++ E LR FG  +G+ FQ+ DD+LD
Sbjct: 183 FAGSAEIGAILAEAPDDQIELLRDFGGAMGMAFQIVDDVLD 223


>gi|325964291|ref|YP_004242197.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323470378|gb|ADX74063.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 366

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L   CA L + +    ++    +E  H  +L HDD+  MD+   RRG PT H
Sbjct: 84  GGKRIRPLLTLLCAHLGDASLPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 141

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +    A++ G+ +   A  ++S   ++ L    R+   L L           GQ+ + 
Sbjct: 142 EVWGNSVAVLTGDLIFARASILVSELGSRALGIQARTFERLCL-----------GQLHET 190

Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                DE  +     +   KTG+L+  + + GAI A A    +  L  +GE +G+ FQLA
Sbjct: 191 VGPRPDEDPIEHYLSVIADKTGSLVAASGQLGAIFAEADPAFEPVLVEYGEKVGVAFQLA 250

Query: 225 DDLLDC 230
           DD++D 
Sbjct: 251 DDVIDV 256


>gi|117617957|ref|YP_855472.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559364|gb|ABK36312.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 323

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          L++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPMLTVMAARALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++S        N+R   +LS   N   +G +  Q+++  
Sbjct: 101 ALFGNAASVLVGDYLYSRSFQMMSELS-----NLRVMEILSDATNTIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++ H  +  ++ +  +G+ LG  FQ+ DD++
Sbjct: 155 DPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVM 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|282861046|ref|ZP_06270111.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE]
 gi|282563704|gb|EFB69241.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE]
          Length = 349

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +  +ALR   A+E +H ++L+HDD+  +D    RR +PT   
Sbjct: 64  GKAIRPALVLAAARALGGDPESALRAAVAVELVHNFTLLHDDV--IDEDATRRHRPTAWA 121

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +    A++ G+ +L  A  +++  +     + R+   LS      +  +  GQ  D   
Sbjct: 122 VFGVPDAVVTGDAVLALAQRLLA--EDPHPGSARASARLSAC----VIELCAGQQADCAL 175

Query: 168 -QDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            + E +D T  +   +   KTGAL+  AC  GA+ A A +   E +  FG   G+ FQL 
Sbjct: 176 EEREPLDVTLDECLTMATAKTGALLGCACALGALYAGADEPAVEAMDGFGREAGLAFQLI 235

Query: 225 DDLL 228
           DDL+
Sbjct: 236 DDLI 239


>gi|320009184|gb|ADW04034.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 336

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   +   + +    +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L   A  I++    +    I+++    L     L+        D  
Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPEAV-RIQAEAFERLVTGQILETAGPRDGRDPV 169

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D ++D      +   KTG+L+  +   GA+MA A ++  + L  +GE LGI FQLADD+L
Sbjct: 170 DHYMD------VLGGKTGSLVAVSGRFGALMAGADESVVDILTQYGERLGIAFQLADDVL 223

Query: 229 DCEED 233
           D   D
Sbjct: 224 DIASD 228


>gi|269926471|ref|YP_003323094.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790131|gb|ACZ42272.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 322

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L S +R  +L GGK++R  LV    S+ + +H   L    A+E +H  +LIHDD  ++D 
Sbjct: 32  LASVVRSLILAGGKRLRPALVFLSGSINSPDHEKLLNAAVAVELLHTATLIHDD--TIDQ 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  T +  +     I+ G+ L   A    +        ++ +++++ +     + 
Sbjct: 90  ADVRRGIATANSIFGPGVVILLGDFLFAKAAHYAAMTSDPEAIDLFAKVLMVI-----VD 144

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           G L  Q L   +    E + +     KT AL     E+GAI++ A +  +  L  +G+ L
Sbjct: 145 GELR-QSLGKHNGVPSEEEYYRRIYAKTAALFECCTETGAILSKAPEPHRRALTTYGKKL 203

Query: 218 GIIFQLADDLLD 229
           G+ FQ+ DDLLD
Sbjct: 204 GLAFQIIDDLLD 215


>gi|195953287|ref|YP_002121577.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932899|gb|ACG57599.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 312

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 19/192 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L+         +   A+ +G  IE IH  SL+HDD+  +D    RRGKP+V+
Sbjct: 40  GGKRIRPLLLVYLVESLGGDVDKAIILGCGIEYIHIASLLHDDV--VDKADSRRGKPSVN 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + +  A++ G+ L   A  + ++       +I S+ ++++           GQ+L+++
Sbjct: 98  KVFGQEAAVLTGDYLYAKALFLYANYGNAKMIDILSKAVMNMAE---------GQLLELK 148

Query: 169 D--EFIDETQVFMIQKMKTGALM--CFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                IDE   F I   KT  L+  CF    GA++++    E E+    G  LG  FQL 
Sbjct: 149 SIGSIIDEKTYFDIIDGKTAYLIGACFGV--GALISN--YEEYEKFFDIGLKLGRAFQLI 204

Query: 225 DDLLDCEEDLPK 236
           DD LD E D  K
Sbjct: 205 DDALDYEVDSQK 216


>gi|330811830|ref|YP_004356292.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379938|gb|AEA71288.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 322

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDMRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     I SQ    +     LQ      +  ++
Sbjct: 101 AMWGNAPSVLVGDFLYSRSFEMMVELGSMPVMKILSQATRIIAEGEVLQ------LSKVR 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + + KT  L   +  S A +A AS  + E LR FG++LG+ FQL DDLL
Sbjct: 155 DASTTEETYMEVIRGKTAMLFEASTHSAAALAGASAEQSEALRTFGDHLGVAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYKGD 219


>gi|315605114|ref|ZP_07880166.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313221|gb|EFU61286.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 337

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 18/190 (9%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           A+ GGK++R  L   CA L   +       L    A+E  H  SL HDD+  MD+   RR
Sbjct: 47  AVAGGKRMRPLLTLVCAQLGESDRRLDDAVLTAATAVELTHLASLYHDDV--MDSAPTRR 104

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P+    +    AI+AG+ L   A  +++S   ++  +          H    + +  G
Sbjct: 105 GVPSAQHLWGNNRAILAGDILFARASLLVASLGPEIVAH----------HARTFERLCQG 154

Query: 163 QMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           Q+ +         +V F +Q +  KTG+L+  A   GA+++ A +   + +  FGE +G+
Sbjct: 155 QLNETFGPTHGADRVDFYLQVLADKTGSLVSTAASFGALLSGAGRLVADVVADFGEKVGV 214

Query: 220 IFQLADDLLD 229
            FQ+ADD+LD
Sbjct: 215 AFQIADDVLD 224


>gi|220909327|ref|YP_002484638.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
 gi|219865938|gb|ACL46277.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
          Length = 989

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 26/226 (11%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S L +N +   T+ D  L+Q       Q   ++LS      L GK+IR+  V   A +  
Sbjct: 677 SVLDQNFQLDQTVADPALVQ-------QVVRQILS------LPGKRIRALCVYLSACVGR 723

Query: 67  VNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            ++  A   +  A+E +H  SL+HDD+  +D    RR +P+ ++ Y    +I+ GN L+ 
Sbjct: 724 RSYPQAAENIALAVELVHAASLLHDDV--IDLAPQRRHQPSSNMVYGNAASILGGNFLVV 781

Query: 126 YAFEII-SSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            A +++ ++ +  L  D +R+   + L+ +  L+    GQ++      ++  Q   I + 
Sbjct: 782 QAAQLLLNTGRPGLAADLLRAVEAMILSESEQLENR--GQVI------LNPEQYLNIIRG 833

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT  L  + C++GA +++      E L  +GENLG+ FQL DDLLD
Sbjct: 834 KTATLFRWGCQAGASISNHPAAVVEALARYGENLGMAFQLIDDLLD 879


>gi|145327729|ref|NP_001077840.1| SPS1 (solanesyl diphosphate synthase 1);
           trans-octaprenyltranstransferase [Arabidopsis thaliana]
 gi|332197994|gb|AEE36115.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 367

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+   IE IH  SLIHDD+  +D   +RR
Sbjct: 85  GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 142

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 143 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 193

Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F  +T++  ++++   KT +L+  + +  AI +    +  E++  FG+NLG+
Sbjct: 194 EIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGL 253

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 254 SFQIVDDILD 263


>gi|114327555|ref|YP_744712.1| decaprenyl diphosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315729|gb|ABI61789.1| farnesyl pyrophosphate synthetase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 353

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R  L    A L   +   A      + + A +E IH  +L+HDD+  +D   +RR
Sbjct: 66  GGKRLRPLLTLASARLCGFDTALAGGVPRHVHLAACVEFIHTATLLHDDV--VDESRMRR 123

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  + +  +    +++ G+ L   AF+++    +     I S+   ++     LQ     
Sbjct: 124 GMASANAVFGNNASVLVGDFLFARAFQLMVEDGSLQVLAILSKAAATIAEGEVLQ----- 178

Query: 163 QMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             L  Q++    E++   + + KT +L   AC+ GA++A     E++ L  +G +LGI F
Sbjct: 179 --LATQNDLETPESRYLEVIEGKTASLFAAACQVGAVVAARPAEEEQALYDYGMSLGIAF 236

Query: 222 QLADDLLDCEED 233
           QL DD LD   D
Sbjct: 237 QLTDDALDYAAD 248


>gi|54307607|ref|YP_128627.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
           SS9]
 gi|46912030|emb|CAG18825.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
           SS9]
          Length = 323

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  LV   A         H+TA    A +E IH  +L+HDD+  +D   +RRGK 
Sbjct: 43  GGKRLRPMLVVLAARALGYQGDKHITA---AAFVEFIHTATLLHDDV--VDESDMRRGKD 97

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T +  +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q++
Sbjct: 98  TANAAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVQ-QLM 151

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D    E     +   KT  L   A +  AI+  +S   +  L+ +G  LG  FQL D
Sbjct: 152 NCNDPNTTEDNYMQVIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLID 211

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 212 DVLDYVAD 219


>gi|85858101|ref|YP_460303.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / decaprenyl diphosphate synthase
           [Syntrophus aciditrophicus SB]
 gi|85721192|gb|ABC76135.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / decaprenyl diphosphate synthase
           [Syntrophus aciditrophicus SB]
          Length = 324

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  L+   A LF         + A +E IH  SL HDD+  +D    RRGK + +
Sbjct: 43  GGKRFRPLLLLISADLFGYQGRRCHTLSAVLEFIHTASLFHDDV--IDKAESRRGKVSAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ L + A+++++        ++    ++S T N+  +G +  Q++   
Sbjct: 101 NIWGNAAVVLVGDFLYSKAYQLMAE-----DGSMEIMHLISTTSNVMSEGEVF-QLIKCG 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E     I + KT  L+  AC  G  +  A  ++ E L+ FG  LG  FQ+ DD L
Sbjct: 155 EVNLTEEDYLKIIEKKTAILISAACALGGYLGGAEVHQIEALKQFGLRLGSAFQMTDDTL 214

Query: 229 DC---EEDLPK 236
           D    EED  K
Sbjct: 215 DYVAREEDFGK 225


>gi|284034155|ref|YP_003384086.1| trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836]
 gi|283813448|gb|ADB35287.1| Trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836]
          Length = 340

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 21/230 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L S+++   +R++  L D   Q+ +   TQ    ++ A      GGK+ R  LV   A 
Sbjct: 19  ALESRVRAGLERVEQALRDST-QSEAPFVTQAAQHVMVA------GGKRFRPLLVLLAAE 71

Query: 64  LFNVNHLTALRVGAAIECI-HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                  T +   A +  + H  +L HDD+  MD   +RRG  T +  +D   AI+AG+ 
Sbjct: 72  FGPRPTATEVVDAAVVVELTHVATLHHDDV--MDEAALRRGSSTANAAWDNSVAILAGDW 129

Query: 123 LLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           L   A ++++S  P+      I+++    L      + +  G+  D    ++       +
Sbjct: 130 LFAKASDLVASLGPEAV---RIQARTFGRLVEGQIRETLGVGEGQDPLAHYLS------V 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              KTG+L+  +   GA  A A    +E LR FGE +G  FQLADD+LD 
Sbjct: 181 VADKTGSLIATSALFGARFAGAPAEVQEALRAFGEEIGTAFQLADDILDV 230


>gi|315305700|ref|ZP_07875309.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL
           F6-596]
 gi|313625931|gb|EFR95454.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL
           F6-596]
          Length = 169

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 13/161 (8%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ L    F+I+
Sbjct: 2   AVSIAAALEVLHMATLIHDDV--VDDSPMRRGIPTIHSKYGRNYAVYTGDYLFCICFKIL 59

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGAL 188
           SS  + + +NI        + NI  + +L G++  ++  + +D T    + ++  KT  L
Sbjct: 60  SSHSSSV-ENIEFN-----SKNI--EKILMGELDQMRTSYKMDVTVREYLSRISGKTAQL 111

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              +C SGA  + AS+    +    G  LG+ FQ+ DD+LD
Sbjct: 112 FALSCYSGAAGSKASRMTVAKCYNIGHYLGMAFQIIDDVLD 152


>gi|116617356|ref|YP_817727.1| geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116096203|gb|ABJ61354.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 332

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 16/196 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +AIR     GK +R  L    + L +  +   A+ +GA+IE +H  +LIHDD+  +D   
Sbjct: 40  NAIRSQASAGKLVRPALTLLFSELTDAPYNQKAIVLGASIELLHLATLIHDDI--IDESK 97

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+ ++   + + TA+ AG+ LLT    +++       DNI++   L+L     L+ +
Sbjct: 98  LRRGQDSIQAHFGKDTAVYAGDYLLTGMLSLLND-----ADNIQAN-KLALE---SLRNI 148

Query: 160 LGGQMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEK-ERLRCFGE 215
           L G++    + ++ +T    ++ Q   KT AL   +   GA  +    ++  + +   GE
Sbjct: 149 LFGELTQKHNRYLTDTSFDNYLTQITGKTAALFKLSVLFGATSSDGVSSQLLDVVGKLGE 208

Query: 216 NLGIIFQLADDLLDCE 231
           NLGI FQL DD LD E
Sbjct: 209 NLGIAFQLLDDYLDFE 224


>gi|297155996|gb|ADI05708.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
           BCW-1]
          Length = 365

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 72  GGKAVRPALALLSAEVAGQAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T ++    ++ + S T       ++ GQ  DI 
Sbjct: 130 KVHGPAQAILVGDALFALAGEILLELGT-VEAGRATRRLTSATRK-----LIDGQAQDIS 183

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V    +M   KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 184 YEHRERVTVAECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVD 243

Query: 226 DLL 228
           DLL
Sbjct: 244 DLL 246


>gi|257472035|pdb|3IPI|A Chain A, Crystal Structure Of A Geranyltranstransferase From The
           Methanosarcina Mazei
          Length = 295

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 18/185 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  ++   + + + ++  +L    A+E  H  SLIHDDL  +D G +RR  P+  
Sbjct: 41  GGKRIRPIILLLVSEICSGSYSRSLNAALAVEXXHSASLIHDDL--LDQGLVRRNLPSAP 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLD 166
            ++    A++ G+ L+  +   IS P  +            +  + G  G     G++LD
Sbjct: 99  EKFGPSGALLCGDYLIAKSIAFIS-PYGE-----------KVIQDFGKAGXDXAEGEVLD 146

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +DE   E   F     KT +L   +   GA    A +   ER   FG  LG  +Q+ 
Sbjct: 147 LKLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIV 206

Query: 225 DDLLD 229
           DD+L+
Sbjct: 207 DDILE 211


>gi|120434721|ref|YP_860408.1| polyprenyl synthetase [Gramella forsetii KT0803]
 gi|117576871|emb|CAL65340.1| polyprenyl synthetase [Gramella forsetii KT0803]
          Length = 325

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 36/195 (18%)

Query: 50  GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R    FLV +  S  +VN  T  R  + IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 45  GKQMRPMFVFLVAKMVSEGSVNERT-YRGASVIELIHTATLVHDDV--VDDSNRRRGFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157
           ++  +    A++ G+ LL+                    L+LS+ +N         + ++
Sbjct: 102 INALWKNKIAVLVGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVK 143

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            M  G++L I+      I E   + I + KT  L+   C  GA       NE  ++R FG
Sbjct: 144 EMSEGELLQIEKARRLDITEAVYYDIIRQKTATLIAACCSLGAASVKPESNEIAKMRRFG 203

Query: 215 ENLGIIFQLADDLLD 229
           E +G+ FQ+ DDL D
Sbjct: 204 ELIGMAFQIKDDLFD 218


>gi|22329620|ref|NP_173148.2| SPS2 (Solanesyl diphosphate synthase 2);
           trans-octaprenyltranstransferase [Arabidopsis thaliana]
 gi|34327936|dbj|BAC82428.1| solanesyl diphosphate synthase [Arabidopsis thaliana]
 gi|57999785|dbj|BAD88534.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana]
 gi|114213509|gb|ABI54337.1| At1g17050 [Arabidopsis thaliana]
 gi|332191414|gb|AEE29535.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana]
          Length = 417

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+G  IE IH  SLIHDD+  +D   +RR
Sbjct: 135 GGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRR 192

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+ TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 193 GRETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 243

Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F  + ++  +M++   KT +L+  + +  AI +       E++  FG+NLG+
Sbjct: 244 EIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGL 303

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 304 SFQVVDDILD 313


>gi|240273961|gb|EER37480.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus
           H143]
          Length = 414

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A    S 
Sbjct: 121 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRA----SV 174

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L+D    +L+ ++  N     ++ G+ + +++         F ++T  + +QK  +
Sbjct: 175 ALARLRDPEVIELLSTVIAN-----LIEGEFMQLKNTERDELNPSFTEQTITYYLQKTYL 229

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K+ +L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD
Sbjct: 230 KSASLISKSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLD 275


>gi|254451056|ref|ZP_05064493.1| polyprenyl synthetase [Octadecabacter antarcticus 238]
 gi|198265462|gb|EDY89732.1| polyprenyl synthetase [Octadecabacter antarcticus 238]
          Length = 286

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 21/222 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ID  +D LLL   S        R+  A RY    GG ++R+ L  + A+  N++   +L 
Sbjct: 18  IDAEIDRLLLPNPS--------RVADAARYHFSAGGARVRARLGLDAAATLNLSPQASLA 69

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A E +H  SL+HDDL   D   +RRGKP+V  ++ +  AI  G+ L++ A+  I+  
Sbjct: 70  CAIAPELLHNASLVHDDL--QDGDAMRRGKPSVWSRFGKNIAISTGDLLISAAYMAIAV- 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                 +    L L   H+  +   + GQ  D +           I   K+G L+     
Sbjct: 127 ------HPYPALALCAMHD-AVSYTIDGQTQDCRSTQPTPEAYVNIAANKSGPLLALPIR 179

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              I A A    +E +   G  L I +Q  DD++D  +DL K
Sbjct: 180 LALIAAQAPG--QETVVHAGRALAIAYQTLDDIMDRADDLAK 219


>gi|121593262|ref|YP_985158.1| dimethylallyltranstransferase [Acidovorax sp. JS42]
 gi|120605342|gb|ABM41082.1| Dimethylallyltranstransferase [Acidovorax sp. JS42]
          Length = 327

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+                + A +E IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 48  GGKRLRPALLLLTCGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTAN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    +     +R   +L+   N+  +G +  Q+++  
Sbjct: 106 ETFGNPASVLVGDFLHTRSFQMMVEAGS-----MRILQVLADATNVIAEGEVQ-QLMNTH 159

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   +    AI+A ++ + ++    +G+ LG  FQ+ DD+L
Sbjct: 160 DASLDEAGYLHVIRSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVL 219

Query: 229 DCEED 233
           D + D
Sbjct: 220 DYDGD 224


>gi|25027039|ref|NP_737093.1| putative transferase [Corynebacterium efficiens YS-314]
 gi|259508477|ref|ZP_05751377.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
 gi|23492319|dbj|BAC17293.1| putative transferase [Corynebacterium efficiens YS-314]
 gi|259163941|gb|EEW48495.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
          Length = 350

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 19/190 (10%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           A  GGK+ R       AS F    L+   ++    +E  H  +L HDD+  MD   +RRG
Sbjct: 68  ARAGGKRFRPMFAL-LASEFGAKPLSDNVIKAAVVVEITHLATLYHDDV--MDEATMRRG 124

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGG 162
            P+ + ++D   AI+AG+ LL +A  I+S    QL        M ++ H     G ++ G
Sbjct: 125 VPSANSRWDNSVAILAGDILLAHASRIMS----QLG-------METVAHFAETFGELVTG 173

Query: 163 QMLD-IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           QM + +     D    +M + + KT  L+  A   G++ A A+    + L+ FG  +G+I
Sbjct: 174 QMRETVGARGGDPVDHYMKVIREKTAVLIASAGFLGSMHADATPEHVDALKKFGAAVGMI 233

Query: 221 FQLADDLLDC 230
           FQ+ DD++D 
Sbjct: 234 FQIVDDIIDI 243


>gi|309388901|gb|ADO76781.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
          Length = 319

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 14/186 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKK+R FL+   AS  + +    L++G+ IE +H  SL+HDD+  +DN  +RRGK T  
Sbjct: 41  GGKKLRPFLMFLAASFGDYDQEKLLQLGSGIELLHMSSLLHDDV--IDNAKLRRGKKTAQ 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++ +  A+  G+ LL+ +F I           +    +  +  N+ L  +  G++   +
Sbjct: 99  HKFGKEEAVFIGDFLLSRSFNIFFKY-------LDKSTLGKMNKNVSL--LCEGEIEQSE 149

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            +F   I     +   + KT      +   GA ++     +   L   G  +G+ FQ+ D
Sbjct: 150 KKFDLEISMRDYYRRIRHKTALFFALSSYLGAYVSGVRGKKLNLLYKLGLEIGMAFQIKD 209

Query: 226 DLLDCE 231
           DLLD E
Sbjct: 210 DLLDFE 215


>gi|326200897|ref|ZP_08190769.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988465|gb|EGD49289.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 335

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 19/200 (9%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L SA R+ +  GK +R+ ++             A+ + A  E +H +SL+ DD+  MD  
Sbjct: 35  LYSAARHYMGKGKHLRALMLLLACGATGGEPSNAIDIAAGHEILHTFSLVQDDI--MDKS 92

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQ 157
             RRG  TVHI+Y   TAI++ + L   AFE  +      + DN +   +L     +G+ 
Sbjct: 93  EKRRGTDTVHIKYGLDTAILSADYLFLKAFESFNINFINHEFDNAKRSRLLKEILELGMV 152

Query: 158 GMLGGQMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            +  GQ LD+         +D+++D     MI K KT       C  G I+A  S+    
Sbjct: 153 -ICEGQFLDLNFERKFSLAEDDYLD-----MIYK-KTAVFFEKVCTIGGIIADTSEENIH 205

Query: 209 RLRCFGENLGIIFQLADDLL 228
            +   G+ LG+ FQ+ DD+L
Sbjct: 206 SISEMGKCLGMAFQIKDDML 225


>gi|325292016|ref|YP_004277880.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3]
 gi|325059869|gb|ADY63560.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3]
          Length = 338

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASASMFGYEGDHHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++   QV    + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 175 DDYL---QVI---RAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|67866738|gb|AAY82368.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
          Length = 358

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 77  GGKRLRPMLTLASASMFGYEGDHHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGSLDALDVLSTAASVIAEGEVLQLSVAKNMETTE 194

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+++       + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 195 DDYL------QVIRAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 248

Query: 229 D 229
           D
Sbjct: 249 D 249


>gi|225181669|ref|ZP_03735109.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167650|gb|EEG76461.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 320

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 31/193 (16%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  L     +L+       L V  A+E IH  +L+HDD+  +D   +RRGKP+++ 
Sbjct: 41  GKRIRPALFFLSLALWKEEPQEHLSVAVALELIHSATLVHDDV--VDASKVRRGKPSINE 98

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   TA++ G+ L   AFE                 +L+   NI L   +   + D+ +
Sbjct: 99  AWGNHTAVLTGDYLFARAFE-----------------LLTEYGNISLIKEMSALVRDMSE 141

Query: 170 -EFIDETQVF--------MIQKM--KTGALMCFACESGAIMAHASQNEKE-RLRCFGENL 217
            E   + Q F         +Q++  KT        +SG I+A     E    L  +G N+
Sbjct: 142 GEIQQQAQRFCTDLDIKNYLQRIAKKTARFFMVCAKSGGIVARPQDTEAICALENYGYNV 201

Query: 218 GIIFQLADDLLDC 230
           G+ FQL DDLLD 
Sbjct: 202 GMAFQLIDDLLDV 214


>gi|4836881|gb|AAD30584.1|AC007260_15 Very similar to prenyltransferases [Arabidopsis thaliana]
          Length = 390

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+   IE IH  SLIHDD+  +D   +RR
Sbjct: 108 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 165

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 166 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 216

Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F  +T++  ++++   KT +L+  + +  AI +    +  E++  FG+NLG+
Sbjct: 217 EIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGL 276

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 277 SFQIVDDILD 286


>gi|261854792|ref|YP_003262075.1| trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2]
 gi|261835261|gb|ACX95028.1| Trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2]
          Length = 325

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  ++   A         A ++ A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 46  GGKRFRPMVLMLAAQALGGTSPWAAQMAAVVELIHTATLLHDDV--VDESTLRRGRDTAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AFE++     ++++     ++   T+ I    +L  Q++++ 
Sbjct: 104 ALFGNAASVLTGDFLYSRAFEMM----VEVQEPRVMAILAQATNRIAEGEVL--QLMNMG 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   +   KT  L   A +  A++    +  +  L  +G +LG  FQL DD+L
Sbjct: 158 DADVSEDRYVDVIVRKTATLFAAATQLAAVLEGQPEEVEAALTAYGLHLGTAFQLIDDVL 217

Query: 229 DCEED 233
           D   D
Sbjct: 218 DYTGD 222


>gi|293191764|ref|ZP_06609288.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309]
 gi|292820457|gb|EFF79440.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309]
          Length = 337

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 18/190 (9%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           A+ GGK++R  L   CA L           +    A+E  H  SL HDD+  MD+   RR
Sbjct: 47  AVAGGKRMRPLLTLVCAQLGEPERGLDEQVITAATAVELTHLASLYHDDV--MDSAPTRR 104

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P+    +    AI+AG+ L   A  +++S   ++  +          H    + +  G
Sbjct: 105 GVPSAQHLWGNNRAILAGDILFARASLLVASLGPEMVAH----------HARTFERLCEG 154

Query: 163 QMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           Q+ +         +V F +Q +  KTG+L+  A   GA+++ A Q   + +  FGE +G+
Sbjct: 155 QLNETFGPTDGADRVDFYLQVLADKTGSLVSTAASFGALLSGAGQLMADVVSDFGEKVGV 214

Query: 220 IFQLADDLLD 229
            FQ+ADD+LD
Sbjct: 215 AFQIADDVLD 224


>gi|291287109|ref|YP_003503925.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884269|gb|ADD67969.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 324

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   +   A +   +    + +   +E IH  +L+HDD+  +D    RRGK + +
Sbjct: 43  GGKRLRPVFMILSALMCGYDGERTINLAGVVEYIHTATLLHDDV--IDGAKYRRGKESAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +     ++ G+ L + AF         +KD + R+Q++L++      +G +  Q++  
Sbjct: 101 NVFGNDITVLCGDFLYSRAF------MNLVKDGDSRAQMLLAVAARTMSEGEVF-QLIKT 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  I       I   KT  +    CE GAI+      +++ L  FG+ LGI FQ+ADD+
Sbjct: 154 ADVKITMDDYLRIINSKTAVMFATCCEIGAILGEMPVEKQKALADFGKTLGIAFQMADDI 213

Query: 228 LDCEEDLPKK 237
           LD   D P+K
Sbjct: 214 LDYLGD-PEK 222


>gi|332982510|ref|YP_004463951.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
 gi|332700188|gb|AEE97129.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
          Length = 322

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 16/199 (8%)

Query: 38  RLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RLLS +  + A  GGK++R  +V   +          + + AAIE +H  +L+HDD+  +
Sbjct: 31  RLLSDVINQLAGSGGKRLRPLMVILSSRFGGYKRDEIIHLAAAIEILHMATLVHDDI--I 88

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  IRRG+PTV  ++ +  A+  G+ L +  F ++S  +    D      +  ++  + 
Sbjct: 89  DDAPIRRGEPTVQSRWGKDVAVFTGDFLFSTVFSLLSK-EVSFDD------LYEVSRVV- 140

Query: 156 LQGMLGGQMLDIQDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRC 212
            + +  G++   Q  +     V  ++ + + KT  L   +C  GA  A  S+     L  
Sbjct: 141 -KQICEGEVDQYQHRYNTAVSVRSYLRRIRHKTADLFALSCVIGAKRAGCSKPIYNALEN 199

Query: 213 FGENLGIIFQLADDLLDCE 231
           FG + G++FQ+ DD+LD E
Sbjct: 200 FGMDFGMVFQIIDDILDFE 218


>gi|330831008|ref|YP_004393960.1| trans-hexaprenyltranstransferase [Aeromonas veronii B565]
 gi|328806144|gb|AEB51343.1| Trans-hexaprenyltranstransferase [Aeromonas veronii B565]
          Length = 323

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          L++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPMLTVMAARALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F++++        N+R   +LS   N   +G +  Q+++  
Sbjct: 101 AMFGNAASVLVGDYLYSRSFQMMAE-----LSNLRVMEILSDATNTIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++ H  +  ++ +  +G+ LG  FQ+ DD++
Sbjct: 155 DPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDVM 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|302418638|ref|XP_003007150.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum
           VaMs.102]
 gi|261354752|gb|EEY17180.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum
           VaMs.102]
          Length = 451

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 24/176 (13%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+ DD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 193 RLAEITELIHTSSLLRDDV--IDHSVSRRGSPSANLEFSNKMAVLAGDFLLGRASVALA- 249

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK----------M 183
              +L+D    +L+ ++  N     ++ G+ + +++   DE      Q+          +
Sbjct: 250 ---RLRDAEVIELLATVIAN-----LVEGEFMQLKNTAQDERNPAWSQEAVDYYLRKTYL 301

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           KT +L+  +C + A++ +A     E    +G+NLG+ FQL DD+LD    E+DL K
Sbjct: 302 KTASLISKSCRASALLGNADAATVEAAYAYGKNLGLAFQLVDDMLDYTRSEKDLGK 357


>gi|313125957|ref|YP_004036227.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
           [Halogeometricum borinquense DSM 11551]
 gi|312292322|gb|ADQ66782.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
           [Halogeometricum borinquense DSM 11551]
          Length = 348

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 30/215 (13%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLT---------------ALRVGAAI 79
           +RL  A RY L  GGK++R  +    A +L +   L+                +    +I
Sbjct: 35  ERLYEATRYLLEAGGKRLRPTVTLLTAEALADAEPLSEDYRSFPALDGADIDVMAAAVSI 94

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E I  ++LIH     MD+  +RRG P VH +YD  TAI+AG+ L   AFE ++      +
Sbjct: 95  EVIQSFTLIH--DDIMDDDDLRRGVPAVHKEYDTETAILAGDTLYAKAFEFMTQTGADPQ 152

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACE 194
           + + +  +L+ T       +  GQ LD+  EF   T+V   +     ++KT  L   A  
Sbjct: 153 NGLEAVRLLATT----CTKICEGQALDV--EFERRTEVLPDEYLEMVELKTAVLYGAAAA 206

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  ++  A     E L  +G + G  FQ+ DD+LD
Sbjct: 207 TAGVLMGADDETVEALYRYGIDSGCAFQIQDDVLD 241


>gi|154494276|ref|ZP_02033596.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC
           43184]
 gi|154085960|gb|EDN85005.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC
           43184]
          Length = 324

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 14/205 (6%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           A+ ++++ N RL SAI   L   GK +R  LV   A          +     +E +H  +
Sbjct: 23  AASLRSETN-RLQSAIDQILNASGKHVRPLLVLLTAKACGQVTDNTINSAVLLELLHTAT 81

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDD+  +D    RRG P+++  +D   +++ G+ +L+ A  +I S +T    N++   
Sbjct: 82  LIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GNLQ--- 131

Query: 147 MLSLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           ++ +  N+G     G   Q+   ++  IDE+    + + KT  L+    E G+I A AS 
Sbjct: 132 IIGIVSNLGRDLSEGEIKQLETAEESIIDESCYMQVIRKKTAMLLSACAEIGSISAGASG 191

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
              E+ R FGE LG  FQ+ DD+ D
Sbjct: 192 EMVEKCREFGEYLGYCFQIKDDIFD 216


>gi|46138837|ref|XP_391109.1| hypothetical protein FG10933.1 [Gibberella zeae PH-1]
          Length = 444

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 186 RLAEIAELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 242

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L++    +L+ ++  N     ++ G+ + +++        ++ +ET  + +QK  +
Sbjct: 243 ---RLRNPEVVELLATVIAN-----LVEGEFMQLKNTERDERNPKWSEETVTYYLQKTYL 294

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++ +      +    +G NLG+ FQL DDLLD
Sbjct: 295 KTASLISKSCRAAALLGNTDAVTVDAAYSYGRNLGLAFQLVDDLLD 340


>gi|293375911|ref|ZP_06622172.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
 gi|325838688|ref|ZP_08166603.1| polyprenyl synthetase [Turicibacter sp. HGF1]
 gi|292645433|gb|EFF63482.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
 gi|325490738|gb|EGC93045.1| polyprenyl synthetase [Turicibacter sp. HGF1]
          Length = 318

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 27/221 (12%)

Query: 20  LDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLTALRVG 76
            +DLLL+  S   T  +D ++++ +   ++ GGK+IR   V   A L  NVN        
Sbjct: 14  FNDLLLKAVSSDSTLFSDPKMMNDLLQIIMNGGKRIRPLFVLLAADLKENVNKQEIYTAA 73

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--- 133
            AIE +H  SLIHDD+  +D    R    T+H QY     +  GN +L  + E+ S    
Sbjct: 74  VAIELMHVASLIHDDI--IDESTTRHNVTTLHEQYSLTVGVHLGNFVLNKSLELFSEFKI 131

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM----LDIQ-DEFIDETQVFMIQKMKTGAL 188
           PK         Q +  + +N+ L G L  Q      D+  D++I+++        KTGAL
Sbjct: 132 PKLH-------QEIAVVMNNLCL-GELNQQHNHFNFDLSFDDYINKSY------QKTGAL 177

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  +   G ++A    N   +L   G  +GI +QL DD+LD
Sbjct: 178 ISLSLVVGGLVAGLDANIINQLSTIGSQIGIAYQLKDDILD 218


>gi|57833856|ref|NP_822197.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|57546763|dbj|BAC68732.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
          Length = 413

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 32/218 (14%)

Query: 44  RYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           R+ L GGK+ RS   +               ALRVGAA+E I   +L+HDD+  MD   +
Sbjct: 67  RFTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRVGAALELIQTCALVHDDV--MDGSRL 124

Query: 101 RRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           RRG+P +H                 ++ E  AI+AG+  L +A ++++          R 
Sbjct: 125 RRGRPALHTDVSAQYADAVLPAPGTRFGEAAAILAGDLALAWADDVVADTDLAPDPGRRV 184

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCF--ACESGAIM 199
           + + S         M+ GQ LDIQ +      E +      +K+ AL       E GA +
Sbjct: 185 REVWSCLR----MEMVAGQYLDIQGQATSSHSEARAMRAACLKS-ALYSVQRPLELGAAL 239

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           A A     + L   G  +G+ FQL DDL D  E+ P++
Sbjct: 240 AGADTATTQALCSAGRCVGLAFQLRDDLHDVFEE-PRR 276


>gi|58425655|gb|AAW74692.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 408

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 129 GGKRLRPMLVILAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 186

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 187 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 240

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + A    +++L  +G  LG  FQ+ADD+L
Sbjct: 241 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVL 300

Query: 229 D 229
           D
Sbjct: 301 D 301


>gi|134101439|ref|YP_001107100.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291008114|ref|ZP_06566087.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914062|emb|CAM04175.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 345

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 15/189 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L    +     +   A+    A+E +H +SL+HDD+  MD    RR +PT   
Sbjct: 62  GKAIRPALALLASEAVGGSATAAVPAAVAVELVHNFSLLHDDV--MDGDRTRRHRPTAWT 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+ A +++++ +        ++ +  LT  +  Q ++ GQ +DI  
Sbjct: 120 VFGIGNAVLVGDVLLSLACDVLAASEHPSA----TKAIRLLTDAV--QRLVAGQFVDIA- 172

Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            F D   V +     + + KTGAL+  AC  G I    +  + +  R FGE +G+ FQ  
Sbjct: 173 -FQDRRAVQLDECVSMAENKTGALLGAACALGTIFGDGTAQQVDHQRAFGEGVGLAFQHV 231

Query: 225 DDLLDCEED 233
           DDLL    D
Sbjct: 232 DDLLGIWGD 240


>gi|330465216|ref|YP_004402959.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
 gi|328808187|gb|AEB42359.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
          Length = 316

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 19/186 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   + +    +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 34  GGKRFRPLLVALGAQFGDPSRAEIVSAAVVVELTHLATLYHDDV--MDEAPVRRGAPSAN 91

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++    AI+ G+ L   A ++ +   P+      ++++    L H         GQ+ +
Sbjct: 92  SRWTNSVAILVGDYLFARAADVAAELGPEAV---RLQARTFARLVH---------GQIAE 139

Query: 167 IQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                  +   T    +   KTG+L+  +   G + + A+      L  +GE +G+ FQL
Sbjct: 140 TVGPRAGDDPVTHYLRVIAEKTGSLIATSAHFGGLFSGATPEHVAALAGYGETIGVAFQL 199

Query: 224 ADDLLD 229
           +DDLLD
Sbjct: 200 SDDLLD 205


>gi|322418219|ref|YP_004197442.1| poluprenyl synthetase [Geobacter sp. M18]
 gi|320124606|gb|ADW12166.1| Polyprenyl synthetase [Geobacter sp. M18]
          Length = 322

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A L   +   ++ + + +E IH  +L+HDD+  +DN  +RRG  + +
Sbjct: 41  GGKRIRPALVLLAARLCGYDGSRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F ++ +      D    +++   T  I    +L  Q++   
Sbjct: 99  TLWGNEASVLVGDFLFSKSFSLMVTDG----DLGILKVLADATTMIAEGEVL--QLVCTS 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I   +   + + KT  L+  ACE GAI+  A    ++ +  +G +LGI FQL DD L
Sbjct: 153 DLDITVERYIEVVRSKTAILLSAACEVGAILGGAEPGLRQAVADYGMDLGIAFQLMDDTL 212

Query: 229 D 229
           D
Sbjct: 213 D 213


>gi|91776572|ref|YP_546328.1| trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT]
 gi|91710559|gb|ABE50487.1| Trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT]
          Length = 322

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F         + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPTLVLLSAGAFGRIEAKHHELAAIIELIHTSTLLHDDV--VDESSLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + +  F+++   ++     +R   +LS   N   +G +  Q+L++ 
Sbjct: 101 TLFGNAASVLVGDFIYSRTFQMMVGIQS-----MRVMEVLSDATNTIAEGEVL-QLLNVH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I +     +   KT  L   A   GAI+      ++  +  +G  LG  FQL DD+L
Sbjct: 155 DADITDEAYLRVIHYKTAKLFEAATRLGAIICGTDAQDEAAMAEYGMRLGTAFQLVDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DLSGD 219


>gi|2547044|dbj|BAA22867.1| solanesyl diphosphate synthase [Rhodobacter capsulatus]
          Length = 325

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 20/191 (10%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L        N+ H  A ++ A IE +H  +L+HDD+  +D   +RRG+P
Sbjct: 46  GGKRMRPIMCLLAAYACGETNLKH--AQKLAAIIEMLHTATLVHDDV--VDESGLRRGRP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T +  ++  TA++ G+ L+  AF+++        DN    ++L    + G   +  G++L
Sbjct: 102 TANATWNNQTAVLVGDFLIARAFDLLVD-----LDN----MILLKDFSTGTCEIAEGEVL 152

Query: 166 DIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            +Q +   D T+   +Q +  KT  L   A E  AI+A   +  +E LR F  + G  FQ
Sbjct: 153 QLQAQHQPDTTEDIYLQIIHGKTSRLFELATEGAAILAGKPEY-REPLRRFAGHFGNAFQ 211

Query: 223 LADDLLDCEED 233
           + DD+LD   D
Sbjct: 212 IIDDILDYTSD 222


>gi|302898878|ref|XP_003047935.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728867|gb|EEU42222.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 443

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 91/166 (54%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 185 RLAEITELIHTASLLHDDV--IDHSISRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 241

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L++    +L+ ++  N     ++ G+ + +++        ++ +ET  + +QK  +
Sbjct: 242 ---RLRNPEVVELLATVIAN-----LVEGEFMQLKNTERDERNPKWSEETVSYYLQKTYL 293

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++ ++     +    +G NLG+ FQL DDLLD
Sbjct: 294 KTASLISKSCRAAALLGNSDPVTVDAAYSYGRNLGLAFQLVDDLLD 339


>gi|254796624|ref|YP_003081460.1| polyprenyl synthetase family protein [Neorickettsia risticii str.
           Illinois]
 gi|254589861|gb|ACT69223.1| polyprenyl synthetase family protein [Neorickettsia risticii str.
           Illinois]
          Length = 302

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 28/231 (12%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +   E  + ++ +L D        M T    R +   +  L  GK+IR+ L     +L
Sbjct: 9   LNASFSEKLRSVEEVLYD-------SMATFTKLRSIEDAKKMLSSGKRIRALLSLLSFAL 61

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +    +R  A IE IH  +L+HDD+  +D   IRRGKP +   +    +++ G+ L
Sbjct: 62  CENSDTDVEIRAAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNRISVLTGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
           L+ AFEII        +N+   L+LS T     + +  G+ML +Q   E + E++   + 
Sbjct: 120 LSVAFEIILEC-----ENLSVVLLLSKTA----KQLSEGEMLQLQSIGEIVSESEYLEVI 170

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER---LRCFGENLGIIFQLADDLLD 229
             KT  L   A E  AI+      +KE    LR  G  +G+ FQ+ DD+LD
Sbjct: 171 ARKTAVLFSAAAEIAAILT----GKKEYVVILREIGFLIGMAFQIIDDVLD 217


>gi|167947660|ref|ZP_02534734.1| farnesyl-diphosphate synthase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 111

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 43/76 (56%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L  GK+IR  L         V          A+E IH YSL+HDDLP+MD+  +RRG+PT
Sbjct: 36  LAAGKRIRPILTYATGQALGVEINQLDTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPT 95

Query: 107 VHIQYDEVTAIIAGNG 122
            H  YDE TAI+ G+ 
Sbjct: 96  CHKAYDEATAILVGDA 111


>gi|332308087|ref|YP_004435938.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175416|gb|AEE24670.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 323

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   N+       + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ +      D++R   +LS   N+  +G +  Q+++  
Sbjct: 101 EVFGNQASVLVGDFLYTRSFQMMVT-----LDSMRVMQILSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++   S+  +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPNTTEESYMEVIYSKTARLFEAATLLAAVLTKQSEAIENAMQDYGKYLGTAFQLVDDIM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYASD 219


>gi|30699332|ref|NP_177972.2| SPS1 (solanesyl diphosphate synthase 1);
           trans-octaprenyltranstransferase [Arabidopsis thaliana]
 gi|19911233|dbj|BAB86941.1| solanesyl diphosphate synthase [Arabidopsis thaliana]
 gi|57999783|dbj|BAD88533.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
 gi|98960969|gb|ABF58968.1| At1g78510 [Arabidopsis thaliana]
 gi|332197993|gb|AEE36114.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 406

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+   IE IH  SLIHDD+  +D   +RR
Sbjct: 124 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 181

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 182 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 232

Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F  +T++  ++++   KT +L+  + +  AI +    +  E++  FG+NLG+
Sbjct: 233 EIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGL 292

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 293 SFQIVDDILD 302


>gi|158317462|ref|YP_001509970.1| polyprenyl synthetase [Frankia sp. EAN1pec]
 gi|158112867|gb|ABW15064.1| Polyprenyl synthetase [Frankia sp. EAN1pec]
          Length = 338

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR + T  
Sbjct: 53  GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDRERRHRATAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + + +   R+ ++L      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGEPGRRAAVIL----GAGVQDLVRGQAEDLL 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     ++  KTGAL+  +   GA++A A     + L  +G  LG  FQL D
Sbjct: 165 FESRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAPDEVVDGLAEYGSRLGTAFQLID 224

Query: 226 DLL 228
           DLL
Sbjct: 225 DLL 227


>gi|302831696|ref|XP_002947413.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f.
           nagariensis]
 gi|300267277|gb|EFJ51461.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f.
           nagariensis]
          Length = 389

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 26/193 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAA------------IECIHCYSLIHDDLPSMD 96
           GGKK+R  +V      F V H TA R G               E IH  SL+HDD+  +D
Sbjct: 107 GGKKLRPVIV------FLVAHSTAQREGLTELTDKHRRLAEITEMIHTASLVHDDV--LD 158

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              IRRGK T++  Y    A++AG+ L   +   +++      DN+    ++S       
Sbjct: 159 ECDIRRGKKTINSMYGTRVAVLAGDFLFAQSSWFLAN-----LDNLEVIKLISQVIADFA 213

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            G +  Q   + D  I   Q       KT +L+  +C S A+ + +    KE +  +G++
Sbjct: 214 NGEIS-QAASLFDTDITLEQYLDKSFYKTASLIAASCRSAAVFSDSPVEVKEAMYSYGKH 272

Query: 217 LGIIFQLADDLLD 229
           LG+ FQ+ DD+LD
Sbjct: 273 LGLAFQVVDDVLD 285


>gi|294496201|ref|YP_003542694.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Methanohalophilus mahii DSM 5219]
 gi|292667200|gb|ADE37049.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Methanohalophilus mahii DSM 5219]
          Length = 321

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 13/220 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72
           K+  T++D+ + +    +   H + L  A RY    GGK++R  ++   A     +  + 
Sbjct: 8   KKRSTLVDESIQE---FLPIDHPEELYRATRYLPDAGGKRLRPAVLMLSAEAVGGDSDSV 64

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E IH ++LIH     MD   IRRG P +H+++    AI+AG+ L + AFEIIS
Sbjct: 65  LPAAVALELIHNFTLIH--DDIMDRDDIRRGMPALHVKWGTAGAILAGDTLYSRAFEIIS 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALM 189
                 +  ++   +LS T       +  GQ LD+   + + +D  +   + + KT  L 
Sbjct: 123 KMDADPQKLLKCVALLSRT----CTKICEGQWLDVDFEKRDIVDVDEYLEMIENKTSVLY 178

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A + GAI+  AS    + +  FG   GI FQ+ DD++D
Sbjct: 179 GAAAKVGAILGGASDEVADAMYEFGRLTGISFQIHDDVID 218


>gi|299820943|ref|ZP_07052832.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601]
 gi|299817964|gb|EFI85199.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601]
          Length = 326

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 24/190 (12%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R     L  +    +NV+   ++ V +A+E +H  +LIHDD+  +D+  +RRG P
Sbjct: 46  GGKLLRPAFVLLTAQAGPEYNVDR--SIAVASALEVLHMATLIHDDV--IDDADMRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD------NIRSQLMLSLTHNIGLQGM 159
           T+H ++    A+  G+ L    F+I+S+    +++      NI   LM  L         
Sbjct: 102 TIHSKFGRKYAVYTGDYLFCVCFKILSAHADSVENIDFNSKNIEKILMGEL--------- 152

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              QM D+    +           KT  L   +C SGA+ + A +      +  G  +G+
Sbjct: 153 --NQMKDLYHMNVTVKDYLTRISGKTAQLFALSCYSGAVSSKAPRKTLYTAKNAGHFIGM 210

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 211 AFQIIDDILD 220


>gi|114570734|ref|YP_757414.1| trans-hexaprenyltranstransferase [Maricaulis maris MCS10]
 gi|114341196|gb|ABI66476.1| Trans-hexaprenyltranstransferase [Maricaulis maris MCS10]
          Length = 340

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A++   + +  L++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 59  GGKRVRPMITVAAANMIGHSDIAPLKLAAAVEFIHTATLLHDDV--VDESGMRRGKAAAN 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +   ++++ G+ L   +F ++    +     +R+  +LS   +   +G +  Q+  ++
Sbjct: 117 LVWGNASSVLVGDFLFARSFSLMVEAGS-----MRALGVLSDAASTIAEGEVR-QLSAVK 170

Query: 169 DEFID-ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           D  +  ET + +I           A  SG I+A    NE+  L  +G  LG+ FQL DD 
Sbjct: 171 DVGVSVETYMQIIDAKTAALFAAAAQVSG-IVADRPANEETALETYGRELGLAFQLVDDA 229

Query: 228 LD 229
           LD
Sbjct: 230 LD 231


>gi|15823920|dbj|BAB69143.1| geranylgeranyl pyrophosphase synthase [Streptomyces avermitilis]
          Length = 379

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 32/218 (14%)

Query: 44  RYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           R+ L GGK+ RS   +               ALRVGAA+E I   +L+HDD+  MD   +
Sbjct: 33  RFTLDGGKRTRSQFVWWAHRACGGPAAGAEAALRVGAALELIQTCALVHDDV--MDGSRL 90

Query: 101 RRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           RRG+P +H                 ++ E  AI+AG+  L +A ++++          R 
Sbjct: 91  RRGRPALHTDVSAQYADAVLPAPGTRFGEAAAILAGDLALAWADDVVADTDLAPDPGRRV 150

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCF--ACESGAIM 199
           + + S         M+ GQ LDIQ +      E +      +K+ AL       E GA +
Sbjct: 151 REVWSCLR----MEMVAGQYLDIQGQATSSHSEARAMRAACLKS-ALYSVQRPLELGAAL 205

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           A A     + L   G  +G+ FQL DDL D  E+ P++
Sbjct: 206 AGADTATTQALCSAGRCVGLAFQLRDDLHDVFEE-PRR 242


>gi|331004838|ref|ZP_08328256.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
 gi|330421369|gb|EGG95617.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
          Length = 321

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 85/155 (54%), Gaps = 8/155 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A IE IH  +L+HDD+  M +  +RRG+ T + ++    +++ G+ L + AF+++ + 
Sbjct: 68  LAAIIEFIHSATLLHDDVVDMSD--LRRGRLTANAKWGNAPSVLVGDFLYSRAFQMMVAV 125

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                 ++    +LS T N+  +G +  Q+++ +   I E   F +   KT  L   ACE
Sbjct: 126 G-----DMSIMKILSDTTNLISEGEVQ-QLINAKKPDISEKGYFEVIHKKTAILFEAACE 179

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A ++ A +  + +L  +G ++GI FQL DD LD
Sbjct: 180 TAATLSGAEETLRRQLTAYGYHVGIAFQLIDDALD 214


>gi|212544820|ref|XP_002152564.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium
           marneffei ATCC 18224]
 gi|210065533|gb|EEA19627.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium
           marneffei ATCC 18224]
          Length = 459

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + + Q+    A++AG+ LL  A   ++ 
Sbjct: 201 RLAEITELIHTASLLHDDV--IDNAVTRRSSNSANTQFGNKMAVLAGDFLLGRASVALA- 257

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE----FIDETQVFMIQK--M 183
              +L++    +L+ ++  N     ++ G+ + ++    DE    F D+T  + +QK  +
Sbjct: 258 ---RLRNPEVIELLATVIAN-----LVEGEFMQLKNTASDERSPVFTDDTIAYYLQKTYL 309

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++ +++    E    +G NLG+ FQL DD+LD
Sbjct: 310 KTASLISKSCRATALLGNSTPEIVEAAYSYGRNLGLAFQLVDDMLD 355


>gi|12862621|dbj|BAB32549.1| putative GGPP synthase 1 [Euphorbia tirucalli]
 gi|14041811|dbj|BAB55456.1| putative GGPPsynthase [Euphorbia tirucalli]
          Length = 127

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 3/127 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT HI Y E  A++AG+ LL +AFE I+     +      + +  L   IG 
Sbjct: 1   NDDLRRGKPTNHIVYGEDVAVLAGDALLAFAFEHIAVSTLNVSPARIVRAIGELAKAIGA 60

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + E    ++  I   KT  L+  A   GAI+   +  + E+LR +
Sbjct: 61  EGLVAGQVVDISSEGLSEVDLERLEFIHIHKTAKLLEGAVVLGAILGGGTDEQVEKLRKY 120

Query: 214 GENLGII 220
              +G++
Sbjct: 121 ARGIGLL 127


>gi|88813013|ref|ZP_01128256.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231]
 gi|88789791|gb|EAR20915.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231]
          Length = 253

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A   +      + + A +E IH  +L+HDD+  +D   +RRG+ T  
Sbjct: 43  GGKRLRPLVVLLAARACSCRDHQHILLAAIVEMIHTATLLHDDV--VDESDMRRGRETAR 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AFE++     +L+      +    T+ I    +L  Q+L+I 
Sbjct: 101 QIWGNGASVLVGDFLYTRAFEMM----VELQQTAVMGIFSRATNTIAEGEVL--QLLNIH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   +   KT AL    C   A++   S  ++  +  +G +LG  FQL DD L
Sbjct: 155 DPDVTEERYREVIFRKTAALFEAGCRLAALLGARSVQDQAAMAAYGRHLGTAFQLIDDAL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|310799250|gb|EFQ34143.1| polyprenyl synthetase [Glomerella graminicola M1.001]
          Length = 455

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 89/166 (53%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 197 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 253

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQK--M 183
              +L++    +L+ ++  N     ++ G+ + +++   DE +         + +QK  +
Sbjct: 254 ---RLRNAEVIELLATVIAN-----LVEGEFMQLKNTERDERRPVWSEDALAYYLQKTYL 305

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + AI+  +     E    +G+NLG+ FQL DD+LD
Sbjct: 306 KTASLISKSCRASAILGGSDAASVEAAYAYGKNLGLAFQLVDDMLD 351


>gi|110739325|dbj|BAF01575.1| polyprenyl diphosphate synthase [Arabidopsis thaliana]
          Length = 406

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+   IE IH  SLIHDD+  +D   +RR
Sbjct: 124 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 181

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 182 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLEVIKLISQV-IKDFASG 232

Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F  +T++  ++++   KT +L+  + +  AI +    +  E++  FG+NLG+
Sbjct: 233 EIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGL 292

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 293 SFQIVDDILD 302


>gi|187930136|ref|YP_001900623.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
 gi|187727026|gb|ACD28191.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
          Length = 325

 Score = 72.0 bits (175), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 46  GGKRLRPVILLLVANALGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        +++R   +L+   NI  +G +  Q+L++ 
Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVQA-----NSMRIMQILADATNIISEGEVL-QLLNMH 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA+++ A    +E    +G  +G  FQ+ DDLL
Sbjct: 158 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSDADAATEEAAAEYGRRIGTAFQIVDDLL 217

Query: 229 D 229
           D
Sbjct: 218 D 218


>gi|16801851|ref|NP_472119.1| hypothetical protein lin2790 [Listeria innocua Clip11262]
 gi|16415326|emb|CAC98016.1| lin2790 [Listeria innocua Clip11262]
          Length = 326

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +    +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  + +D T    + ++  KT  L   +C SGA  + A +    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMDVTVREYLSRISGKTAQLFALSCYSGATGSKAPRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|305664558|ref|YP_003860845.1| polyprenyl synthetase [Maribacter sp. HTCC2170]
 gi|88708575|gb|EAR00811.1| polyprenyl synthetase [Maribacter sp. HTCC2170]
          Length = 325

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 38/211 (18%)

Query: 39  LLSAIRYALLG--GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLP 93
           LL+ I Y ++   GK++R   V   A L N   VN  T  R  + IE IH  SL+HDD+ 
Sbjct: 32  LLNRITYYIVNRKGKQMRPMFVFLTAKLLNNGEVNERT-YRGASIIELIHTASLVHDDV- 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH- 152
            +D    RRG  +++  +    A++ G+ L +                    L+LSL + 
Sbjct: 90  -VDESNKRRGFFSINALWKNKIAVLVGDYLFSKG------------------LLLSLDNG 130

Query: 153 --------NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAH 201
                   ++ ++ M  G++L I+      IDE   + I + KT  L+   C  GA    
Sbjct: 131 DFDLLRIISVAVREMSEGELLQIEKARRLDIDEEIYYDIIRQKTATLIAACCSMGACSVK 190

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               E E  R FGE  G+ FQ+ DDL D  E
Sbjct: 191 PESEEVETFRKFGEFCGMAFQIKDDLFDYGE 221


>gi|313622186|gb|EFR92727.1| polyprenyl synthetase [Listeria innocua FSL J1-023]
          Length = 326

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +    +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  + +D T    + ++  KT  L   +C SGA  + A +    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMDVTVREYLSRISGKTAQLFALSCYSGATGSKAPRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|322709158|gb|EFZ00734.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium anisopliae
           ARSEF 23]
          Length = 420

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 162 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 218

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L+     +L+ ++  N     ++ G+ + +++        ++ +ET  + +QK  +
Sbjct: 219 ---RLRHVEVVELLATVIAN-----LVEGEFMQLKNTERDERSPKYSEETLSYYLQKTYL 270

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++ +A     +    +G NLG+ FQL DD+LD
Sbjct: 271 KTASLISKSCRAAALLGNADATTVDAAYSYGRNLGLAFQLVDDMLD 316


>gi|229084617|ref|ZP_04216886.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-44]
 gi|228698693|gb|EEL51409.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-44]
          Length = 320

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 17/194 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V       +    T   V  A+E IH  SL+HDD+  +D   +RR   TV+
Sbjct: 43  GGKRIRPVFVLLAGKFGDYKLETIKHVAVALELIHMASLVHDDV--IDAALLRRNSATVN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++ +  A+  G+ L   + E I++ +        S  +L +           G++  I+
Sbjct: 101 AKWGDRIAMYTGDYLFAKSLECITNLEVPEAHQALSYTILEVCK---------GEIEQIK 151

Query: 169 DEFI--DETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D++      + ++ + K KT  L+  +C+ GAI + AS++   RL  +G  +G+ +Q+ D
Sbjct: 152 DKYNYNQNLRTYLRRIKRKTALLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIID 211

Query: 226 DLLD---CEEDLPK 236
           D+LD    EE L K
Sbjct: 212 DILDFVSTEEKLGK 225


>gi|229821695|ref|YP_002883221.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
 gi|229567608|gb|ACQ81459.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
          Length = 334

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 23/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L +      L    A+E  H  +L HDD+  MD+   RRG P+ H
Sbjct: 50  GGKRMRPALALLTAQLGSGTSDAVLEAAVAVELTHLATLYHDDV--MDSAPTRRGAPSAH 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-------MLSLTHNIGLQGMLG 161
             +    AI+ G+ L   A  ++S       D +R Q        +  L   IG Q    
Sbjct: 108 EVWGNSVAILTGDLLFARASRLVSELG---PDAVRVQAETFERLCLGQLHETIGPQD--- 161

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           G+  D  + ++D      +   KTG+L+  + + GA+ +    +    +  +GE +G+ F
Sbjct: 162 GE--DAVEHYLD------VLAGKTGSLIAASAQYGAMFSGVGADALGTVVRYGEKVGVAF 213

Query: 222 QLADDLLDCEED 233
           QLADD++D   D
Sbjct: 214 QLADDVIDLLSD 225


>gi|170725365|ref|YP_001759391.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908]
 gi|169810712|gb|ACA85296.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908]
          Length = 323

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   + N    L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLSILAARAVDYNGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L      +++   T+ +    +L  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELGSMEVLEVLADATNVLAEGEVL--QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A + +  +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPNTTEESYMRVIYCKTAKLFEAATRLAGVLADSPKEIQVALADYGKYLGTAFQLTDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|117926629|ref|YP_867246.1| trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1]
 gi|117610385|gb|ABK45840.1| Trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1]
          Length = 331

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LTALRVGAAIECI 82
           L +   + TQ  D LL++      GGK++R  L    A LF      + AL + A +E I
Sbjct: 31  LNSPVELITQVGDHLLNS------GGKRLRPILTLVTAKLFGYQKADVHAL-LAAVVEFI 83

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG+ T +  +     I+ G+ L + +F+I+         ++
Sbjct: 84  HTATLLHDDV--VDKSNTRRGQATANSVWGNKAPILVGDFLFSRSFQIMVE-----HGDL 136

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           R   ++S    I  +G +  Q++   D   DE +   + + KT +L   A + GA++A  
Sbjct: 137 RVLRIVSDCCAIISEGEVM-QLVASNDLATDEERYLDVIRHKTASLFASASQLGAVVADQ 195

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           S    +R+  +G  LG  +Q+ DDLLD   +  K
Sbjct: 196 SDEIAQRMYDYGMMLGTAYQVVDDLLDYSAETEK 229


>gi|322693011|gb|EFY84889.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium acridum CQMa
           102]
          Length = 449

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 191 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 247

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L+     +L+ ++  N     ++ G+ + +++        ++ +ET  + +QK  +
Sbjct: 248 ---RLRHVEVVELLATVIAN-----LVEGEFMQLKNTERDERSPKYSEETLSYYLQKTYL 299

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++ +A     +    +G NLG+ FQL DD+LD
Sbjct: 300 KTASLISKSCRAAALLGNADATTVDAAYSYGRNLGLAFQLVDDMLD 345


>gi|295113304|emb|CBL31941.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76]
 gi|315161451|gb|EFU05468.1| polyprenyl synthetase [Enterococcus faecalis TX0645]
          Length = 326

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVSLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|91794278|ref|YP_563929.1| trans-hexaprenyltranstransferase [Shewanella denitrificans OS217]
 gi|91716280|gb|ABE56206.1| Trans-hexaprenyltranstransferase [Shewanella denitrificans OS217]
          Length = 323

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L               L++ A +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLACRAMGYEGDKHLKLAAIVEFIHTASLLHDDV--VDESLLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L D++    +L+ T N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSLHVLKVLANTTNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A AS  E+  L  +G+ LG  FQL DDLL
Sbjct: 155 DPNTTEANYMRVIYCKTAKLFEAATLLAGVLAGASVAEQIALGEYGKFLGTAFQLTDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|127511802|ref|YP_001092999.1| trans-hexaprenyltranstransferase [Shewanella loihica PV-4]
 gi|126637097|gb|ABO22740.1| Trans-hexaprenyltranstransferase [Shewanella loihica PV-4]
          Length = 323

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          L++ A +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLSILAARAIAYEGEAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+LK     +++   T+ +    +L  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELKSMEVLEVLADATNVLAEGEVL--QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +S   +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTSEESYMRVIYCKTAKLFEAATRLAGVLAESSIEVQTALADYGKYLGTAFQLTDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|24375152|ref|NP_719195.1| octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1]
 gi|24349926|gb|AAN56639.1|AE015800_12 octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1]
          Length = 323

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L D++R   +L+ T N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMRVLRVLADTTNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A AS  ++  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETALGDYGKYLGTAFQLTDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|289664594|ref|ZP_06486175.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667160|ref|ZP_06488235.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 332

 Score = 71.6 bits (174), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + A+   +++L  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGATVEVQQQLYDYGMQLGFAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|309783042|ref|ZP_07677761.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA]
 gi|308918150|gb|EFP63828.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA]
          Length = 325

 Score = 71.6 bits (174), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 46  GGKRLRPVILLLVANALGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        +++R   +L+   NI  +G +  Q+L++ 
Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVQ-----ANSMRIMQILADATNIISEGEVL-QLLNMH 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA+++ A    +E    +G  +G  FQ+ DDLL
Sbjct: 158 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGADAATEEAAAEYGRRIGTAFQIVDDLL 217

Query: 229 D 229
           D
Sbjct: 218 D 218


>gi|182437084|ref|YP_001824803.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178465600|dbj|BAG20120.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 356

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +V     +      E IH  SL HDD+  MD   +R G  +V+
Sbjct: 76  GGKRLRPLLTLLGAEFGDVRGEGVIEAAVVAELIHTASLHHDDV--MDEALLRHGVSSVN 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A+ +GN LL  A  + +S      + I  Q   S       + ++ GQ+ ++ 
Sbjct: 134 ARWGNTVAVRSGNWLLARAARLSAS---LAPEAIPLQAEAS-------ERLVRGQLRELV 183

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                E ++   F +   K+ +L+  +   GA+ A A     E L  +GE+LG+ FQ++D
Sbjct: 184 GPDGAERRLSHYFAVISDKSASLISLSLRLGAVQAGAPAGVGEALAAYGEHLGVAFQISD 243

Query: 226 DLLD 229
           DLLD
Sbjct: 244 DLLD 247


>gi|256853573|ref|ZP_05558938.1| polyprenyl synthetase [Enterococcus faecalis T8]
 gi|256710516|gb|EEU25559.1| polyprenyl synthetase [Enterococcus faecalis T8]
 gi|315028578|gb|EFT40510.1| polyprenyl synthetase [Enterococcus faecalis TX4000]
          Length = 326

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGTVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|84622979|ref|YP_450351.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|122879101|ref|YP_200077.6| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188577962|ref|YP_001914891.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84366919|dbj|BAE68077.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188522414|gb|ACD60359.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 332

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVILAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + A    +++L  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|90411954|ref|ZP_01219962.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
           3TCK]
 gi|90327212|gb|EAS43584.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
           3TCK]
          Length = 323

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  LV   A         H+TA    A +E IH  +L+HDD+  +D   +RRGK 
Sbjct: 43  GGKRLRPMLVVLAARALGYQGDKHITA---AAFVEFIHTATLLHDDV--VDESDMRRGKE 97

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T +  +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q++
Sbjct: 98  TANAAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDVMSEATNVIAEGEVL-QLM 151

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D    E     +   KT  L   A +  AI+  +S   +  L+ +G  LG  FQL D
Sbjct: 152 NCNDPNTTEDNYMQVIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLID 211

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 212 DVLDYVAD 219


>gi|256820910|ref|YP_003142189.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582493|gb|ACU93628.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 326

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 21/204 (10%)

Query: 39  LLSAIRYALLG--GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           LL+ I Y ++   GK++R    FLV +  S   V+  T  R  + IE IH  +L+HDD+ 
Sbjct: 32  LLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKVSERT-YRGASVIELIHTATLVHDDV- 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D+   RRG  +++  +    A++ G+ LL+    ++S       DN    L+  ++  
Sbjct: 90  -VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS-- 139

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209
           + ++ M  G++L I+      I E   + I + KT  L+   C  GA      Q E  E+
Sbjct: 140 VAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMGACSVQPEQTELIEK 199

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +R FGE +G+ FQ+ DDL D  ED
Sbjct: 200 MRLFGEYIGMAFQIKDDLFDYTED 223


>gi|220913570|ref|YP_002488879.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
 gi|219860448|gb|ACL40790.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
          Length = 366

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L   CA L + +    ++    +E  H  +L HDD+  MD+   RRG PT H
Sbjct: 84  GGKRIRPLLTLLCAHLGDASLPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAH 141

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +    A++ G+ +   A  ++S      L    R+   L L           GQ+ + 
Sbjct: 142 EVWGNSVAVLTGDLIFARASILVSELGGRALGIQARTFERLCL-----------GQLHET 190

Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                DE  +     +   KTG+L+  + + GAI + A +  ++ L  +GE +G+ FQLA
Sbjct: 191 VGPRPDEDPIEHYLSVIADKTGSLVAASGQFGAIFSGADEAYEDVLVEYGEKVGVAFQLA 250

Query: 225 DDLLDC 230
           DD++D 
Sbjct: 251 DDVIDV 256


>gi|325479330|gb|EGC82426.1| putative geranyltranstransferase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 274

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 8/199 (4%)

Query: 38  RLLSAIRYALLGGKKIRS--FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ++  A+ Y++  GK++R+  FL T   SL  ++    L    AIE I  YSL+HDDLP+M
Sbjct: 29  KIEEAMLYSMEDGKRVRATLFLETRKLSLKEISKNDFL-FALAIEMIQAYSLVHDDLPAM 87

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+   RRGK +VH  + E   I+ G+ LL  A +II   +  L D       + L   +G
Sbjct: 88  DDDDYRRGKESVHKHFGEDLGILTGDALLNEASKII--MEVSLNDPSYLSAGVYLLEKVG 145

Query: 156 LQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           L GM+ GQ+LD++     D+  +  +   KT         +  ++   S  E   L  + 
Sbjct: 146 LSGMIEGQILDLRRRNNYDKDFLIEVYDKKTADFFKACTVAAGLVNGFSDQEIMSLENYA 205

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG+ FQL DDLL  EED
Sbjct: 206 YYLGLGFQLQDDLL--EED 222


>gi|29376566|ref|NP_815720.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecalis V583]
 gi|227520176|ref|ZP_03950225.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX0104]
 gi|227555390|ref|ZP_03985437.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           HH22]
 gi|229545358|ref|ZP_04434083.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX1322]
 gi|255975461|ref|ZP_05426047.1| polyprenyl synthetase [Enterococcus faecalis T2]
 gi|256619530|ref|ZP_05476376.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
 gi|256762928|ref|ZP_05503508.1| polyprenyl synthetase [Enterococcus faecalis T3]
 gi|256962662|ref|ZP_05566833.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
 gi|257082182|ref|ZP_05576543.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
 gi|257084800|ref|ZP_05579161.1| polyprenyl synthetase [Enterococcus faecalis Fly1]
 gi|257090333|ref|ZP_05584694.1| polyprenyl synthetase [Enterococcus faecalis CH188]
 gi|257419680|ref|ZP_05596674.1| polyprenyl synthetase [Enterococcus faecalis T11]
 gi|257422162|ref|ZP_05599152.1| polyprenyl synthetase [Enterococcus faecalis X98]
 gi|307272749|ref|ZP_07553996.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
 gi|307275992|ref|ZP_07557125.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
 gi|307277723|ref|ZP_07558809.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
 gi|307287854|ref|ZP_07567887.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
 gi|307295826|ref|ZP_07575658.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
 gi|312900854|ref|ZP_07760148.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
 gi|312902835|ref|ZP_07762039.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
 gi|29344030|gb|AAO81790.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecalis V583]
 gi|227072348|gb|EEI10311.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX0104]
 gi|227175504|gb|EEI56476.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           HH22]
 gi|229309565|gb|EEN75552.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX1322]
 gi|255968333|gb|EET98955.1| polyprenyl synthetase [Enterococcus faecalis T2]
 gi|256599057|gb|EEU18233.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684179|gb|EEU23874.1| polyprenyl synthetase [Enterococcus faecalis T3]
 gi|256953158|gb|EEU69790.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
 gi|256990212|gb|EEU77514.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
 gi|256992830|gb|EEU80132.1| polyprenyl synthetase [Enterococcus faecalis Fly1]
 gi|256999145|gb|EEU85665.1| polyprenyl synthetase [Enterococcus faecalis CH188]
 gi|257161508|gb|EEU91468.1| polyprenyl synthetase [Enterococcus faecalis T11]
 gi|257163986|gb|EEU93946.1| polyprenyl synthetase [Enterococcus faecalis X98]
 gi|306496157|gb|EFM65736.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
 gi|306500999|gb|EFM70306.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
 gi|306505602|gb|EFM74786.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
 gi|306507322|gb|EFM76459.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
 gi|306510363|gb|EFM79386.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
 gi|310633889|gb|EFQ17172.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
 gi|311291953|gb|EFQ70509.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
 gi|315031036|gb|EFT42968.1| polyprenyl synthetase [Enterococcus faecalis TX0017]
 gi|315149250|gb|EFT93266.1| polyprenyl synthetase [Enterococcus faecalis TX0012]
 gi|315157199|gb|EFU01216.1| polyprenyl synthetase [Enterococcus faecalis TX0043]
 gi|315164740|gb|EFU08757.1| polyprenyl synthetase [Enterococcus faecalis TX1302]
 gi|315167570|gb|EFU11587.1| polyprenyl synthetase [Enterococcus faecalis TX1341]
 gi|315171630|gb|EFU15647.1| polyprenyl synthetase [Enterococcus faecalis TX1342]
 gi|315173215|gb|EFU17232.1| polyprenyl synthetase [Enterococcus faecalis TX1346]
 gi|315575049|gb|EFU87240.1| polyprenyl synthetase [Enterococcus faecalis TX0309B]
 gi|315576766|gb|EFU88957.1| polyprenyl synthetase [Enterococcus faecalis TX0630]
 gi|315582475|gb|EFU94666.1| polyprenyl synthetase [Enterococcus faecalis TX0309A]
          Length = 326

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|315146167|gb|EFT90183.1| polyprenyl synthetase [Enterococcus faecalis TX4244]
          Length = 326

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|326777699|ref|ZP_08236964.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326658032|gb|EGE42878.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 342

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +V     +      E IH  SL HDD+  MD   +R G  +V+
Sbjct: 62  GGKRLRPLLTLLGAEFGDVRGEGGVEAAVVAELIHTASLHHDDV--MDEALLRHGVSSVN 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A+ +GN LL  A  + +S      + I  Q   S       + ++ GQ+ ++ 
Sbjct: 120 ARWGNTVAVRSGNWLLARAARLSAS---LAPEAIPLQAEAS-------ERLVRGQLRELV 169

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                E ++   F +   K+ +L+  +   GA+ A A     E L  +GE+LG+ FQ++D
Sbjct: 170 GPDGAERRLSHYFAVISDKSASLISLSLRLGAVQAGAPAGVGEALAAYGEHLGVAFQISD 229

Query: 226 DLLD 229
           DLLD
Sbjct: 230 DLLD 233


>gi|156973119|ref|YP_001444026.1| octaprenyl-diphosphate synthase [Vibrio harveyi ATCC BAA-1116]
 gi|156524713|gb|ABU69799.1| hypothetical protein VIBHAR_00798 [Vibrio harveyi ATCC BAA-1116]
          Length = 323

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNVIAEGEVQ-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A +N +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|134103316|ref|YP_001108977.1| polyprenyl diphosphate synthase component [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291004465|ref|ZP_06562438.1| polyprenyl diphosphate synthase component [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915939|emb|CAM06052.1| polyprenyl diphosphate synthase component [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 344

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R       A   +      ++  A +E +H  +L HDD+  MD   +RRG  + +
Sbjct: 66  GGKRFRPLFALLAAQFGDPRTENVIKSAAVVEMVHLATLYHDDV--MDEATMRRGATSAN 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   AI+ G+ L   A  +++   T   D  R             + ++ GQM +  
Sbjct: 124 ARWDNSVAILTGDFLFAQASRLVADLGT---DAAREMART-------FEALVTGQMRETV 173

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               DE  V    K+   KTG+L+  A   GA+ + AS  +   +   G  LG  FQ++D
Sbjct: 174 GVGRDEDPVDFYLKVIYEKTGSLIAIAGRFGALFSGASPEQVTAMERLGRILGTAFQISD 233

Query: 226 DLLD 229
           D++D
Sbjct: 234 DVID 237


>gi|315224101|ref|ZP_07865941.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287]
 gi|314945834|gb|EFS97843.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287]
          Length = 326

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 21/204 (10%)

Query: 39  LLSAIRYALLG--GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           LL+ I Y ++   GK++R    FLV +  S   V+  T  R  + IE IH  +L+HDD+ 
Sbjct: 32  LLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKVSERT-YRGASVIELIHTATLVHDDV- 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D+   RRG  +++  +    A++ G+ LL+    ++S       DN    L+  ++  
Sbjct: 90  -VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS-- 139

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209
           + ++ M  G++L I+      I E   + I + KT  L+   C  GA      Q E  E+
Sbjct: 140 VAVREMSEGELLQIEKARRLDIVEEVYYEIIRQKTATLIAACCAMGACSVQPEQTELIEK 199

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +R FGE +G+ FQ+ DDL D  ED
Sbjct: 200 MRLFGEYIGMAFQIKDDLFDYTED 223


>gi|257416435|ref|ZP_05593429.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG]
 gi|257158263|gb|EEU88223.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG]
          Length = 326

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|166711277|ref|ZP_02242484.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 332

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + A    +++L  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAQVQQQLYDYGMQLGFAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|315143484|gb|EFT87500.1| polyprenyl synthetase [Enterococcus faecalis TX2141]
          Length = 326

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|282860737|ref|ZP_06269803.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE]
 gi|282564473|gb|EFB70009.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE]
          Length = 336

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   +   + +    +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVMLASQFGDPDAPGVVPAAVVVELTHLATLYHDDV--MDEADVRRGVESAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L   A  I++    +    I+++    L     L+        D  
Sbjct: 111 TRWGNSVAVLTGDFLFARASHILADLGPEAV-RIQAEAFERLVTGQILETAGPRDGRDPV 169

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D ++D      +   KTG+L+  A   GA+MA A ++  + L  +GE LGI FQLADD+L
Sbjct: 170 DHYMD------VLGGKTGSLVAVAGRFGAMMAGADESVVDILTQYGERLGIAFQLADDVL 223

Query: 229 DCEED 233
           D   D
Sbjct: 224 DIASD 228


>gi|190573198|ref|YP_001971043.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas
           maltophilia K279a]
 gi|190011120|emb|CAQ44729.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas
           maltophilia K279a]
          Length = 332

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV               ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAVGQAGPEHHQLAAIIEFIHTSTLLHDDV--VDESSLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L+     Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELERMPVMQILADATNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ +   +  ++ L  +G +LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|108804794|ref|YP_644731.1| trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM
           9941]
 gi|108766037|gb|ABG04919.1| Trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM
           9941]
          Length = 304

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 19/186 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A +       ALR  AA E +H  +LIHDD+  +D    RRG PT  
Sbjct: 27  GGKRLRPLLLLLSAGIGAPVWEEALRAAAATEVLHTATLIHDDI--VDKAKSRRGAPTTV 84

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            +Y    A+  G+ L   AF  +SS   P+   +  +  R      L      Q    G 
Sbjct: 85  ARYGREVAVATGDYLFAEAFAALSSIGDPRVIREFAEASRGLAAGELE-----QFRASGG 139

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +D++D +++        K+KT  L   AC +G  +   S  + + L  +G+ LG+ FQ+
Sbjct: 140 PVDVED-YLEHI------KLKTAGLFRAACVAGGTLGGLSLPQIDALATYGQALGLAFQM 192

Query: 224 ADDLLD 229
           +DD++D
Sbjct: 193 SDDVMD 198


>gi|10801556|dbj|BAB16691.1| GGPP synthase 1 [Hevea brasiliensis]
          Length = 127

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 3/127 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT HI + E  A++AG+ LL +AFE I+     +      + +  L   IG 
Sbjct: 1   NDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGA 60

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E    +D  ++  I   KT  L+  A   GAI+   +  E E+LR +
Sbjct: 61  EGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKY 120

Query: 214 GENLGII 220
              +G++
Sbjct: 121 ARGIGLL 127


>gi|116874007|ref|YP_850788.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742885|emb|CAK22009.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 326

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +    +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + AS+    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|288922395|ref|ZP_06416585.1| Polyprenyl synthetase [Frankia sp. EUN1f]
 gi|288346266|gb|EFC80605.1| Polyprenyl synthetase [Frankia sp. EUN1f]
          Length = 338

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR + T  
Sbjct: 53  GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRATAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + + +   R+ ++L      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLL--EVEGEPGRRAAVIL----GAGVQDLVRGQAEDLL 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     ++  KTGAL+  +   GA++A A     + L  +G  LG  FQL D
Sbjct: 165 FESRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAPGEVVDGLAEYGSRLGTAFQLID 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|282897366|ref|ZP_06305368.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
 gi|281198018|gb|EFA72912.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
          Length = 323

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L++   +L     L   R+    E IH  SL+HDD+  +D   IRRG P
Sbjct: 44  GGKRIRPAIVLLISRATTLEEDISLGHRRLAEITEMIHTASLVHDDV--VDESDIRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH  +    A++AG+ L   +   +++        + S++++ L      QG      L
Sbjct: 102 TVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLAAGEIQQG------L 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  +           KT +L+  + +S  I+++ S      L  +G++LG+ FQ+ D
Sbjct: 156 NRFDTSLSTETYLKKSYYKTASLIANSAKSAGILSNVSPQSANNLYNYGKDLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|257087255|ref|ZP_05581616.1| polyprenyl synthetase [Enterococcus faecalis D6]
 gi|294780336|ref|ZP_06745705.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
 gi|307270277|ref|ZP_07551585.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
 gi|256995285|gb|EEU82587.1| polyprenyl synthetase [Enterococcus faecalis D6]
 gi|294452600|gb|EFG21033.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
 gi|306513331|gb|EFM81955.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
 gi|315026059|gb|EFT37991.1| polyprenyl synthetase [Enterococcus faecalis TX2137]
 gi|327535515|gb|AEA94349.1| putative trans-hexaprenyltranstransferase [Enterococcus faecalis
           OG1RF]
          Length = 326

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 16/209 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+       D +     
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA-------DAMNGSEF 136

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQ 204
           + +    G++ +L G++  +   F     +    +    KT  L   +C  GA   H+S+
Sbjct: 137 MKINAQ-GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSK 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +  G ++GI FQ+ DD+LD   D
Sbjct: 196 EVQRLAKRIGRHIGIAFQVYDDILDYTAD 224


>gi|257066522|ref|YP_003152778.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798402|gb|ACV29057.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548]
          Length = 278

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 10/198 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGY 99
           A+ YA   GK+IR+ L  E   L + N ++   L    AIE I  YSL+HDDLP+MD+  
Sbjct: 37  AMLYAADSGKRIRASLFLENRRL-HTNEISKNDLLFALAIEMIQAYSLVHDDLPAMDDDD 95

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRGK +VH  Y E  AI+ G+ LL+ A  ++      L+D    +    L   +G  GM
Sbjct: 96  YRRGKESVHKHYGEDLAILTGDALLSEASMLMMD--VSLEDPSYLKAASYLMKKVGKDGM 153

Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQ+LD+  +  + ++  V +  K KTG     A  +  I+    +    +L  +   L
Sbjct: 154 ITGQILDLRRRKSYAEDFLVEVYDK-KTGDFFKGAIVAAGIVNGYDEEIIAKLERYSYYL 212

Query: 218 GIIFQLADDLLDCEEDLP 235
           G+ FQ+ DDLL  EED  
Sbjct: 213 GLGFQIQDDLL--EEDFK 228


>gi|313887289|ref|ZP_07820980.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923208|gb|EFR34026.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 328

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 12/191 (6%)

Query: 47  LLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L  GK IR  +V  CA L     N  T L     IE +H  SLIHDD+  +D    RRG+
Sbjct: 45  LSSGKHIRPIIVGLCAQLCAGQTNEQT-LSAALVIELLHTASLIHDDV--IDWSDTRRGQ 101

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           PT++  Y    A++ G+ +L+ AF E++S   T     + +Q    L+    +Q  L   
Sbjct: 102 PTLNALYSNHQAVLMGDYVLSTAFLELVSREHTPEMLRVVAQAGRDLSIGELMQLSLSKA 161

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               ++++      + +   KTGAL   + + GA+   A++ + +R    G+ +G  FQL
Sbjct: 162 HTYREEDY------YAVVDRKTGALFEASAKLGALSVDATEEQVKRCSRLGQLMGRAFQL 215

Query: 224 ADDLLDCEEDL 234
            DDL D ++ L
Sbjct: 216 QDDLFDYDKAL 226


>gi|292490245|ref|YP_003525684.1| trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4]
 gi|291578840|gb|ADE13297.1| Trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4]
          Length = 322

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A  F+      + +   IE IH  +L+HDD+  +D+  +RRG+ T +
Sbjct: 43  GGKRLRPVVVLLSARAFDYQGSCHIDIATIIEFIHTATLLHDDV--VDSSELRRGQKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AFE++        +++R   +L+ T N   +G +  Q+L+  
Sbjct: 101 SIWGSEASVLVGDFLYSRAFEMMVD-----VNSMRVMEILARTTNTIAEGEVM-QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   + + KT  L   A + GA+++     E+E +  +G +LG  FQL DD+L
Sbjct: 155 DPDTTEERYLDVIRSKTAKLFEAATQLGAVLSCRPAAEEEAMAAYGMHLGTAFQLTDDVL 214

Query: 229 D---CEEDLPK 236
           D     +DL K
Sbjct: 215 DYSASSDDLGK 225


>gi|330718944|ref|ZP_08313544.1| geranyl pyrophosphate synthase [Leuconostoc fallax KCTC 3537]
          Length = 255

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 25/219 (11%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL----FNVNHLTALRVGAAI 79
           +LQ  S   T     + +AI+  L  GK +R  L    + L    +N N +T   +GA++
Sbjct: 1   MLQQVSSSWTIGFKDIDTAIKSQLNAGKLVRPALTLLFSELTDEAYNENAIT---LGASV 57

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D   +RRG+ ++  ++ + TA+ +G+ LLT  F ++        
Sbjct: 58  ELLHLATLIHDDI--IDESKLRRGQTSIQTRFGKDTAVYSGDYLLTGMFTLL-------- 107

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDET-QVFMIQ-KMKTGALMCFACESG 196
            N  + + ++   N  L+ +L G++   Q+ + +D T   +++Q K KT AL   +   G
Sbjct: 108 -NKVNNIEVNQYANESLKEILFGELSQKQNRYRLDMTFDEYLLQIKGKTAALFRMSTLFG 166

Query: 197 AIMAHAS---QNEKERLRCFGENLGIIFQLADDLLDCEE 232
            IM+  +    N ++ ++  GE +G+ FQL DD LD  E
Sbjct: 167 -IMSRPNDEINNFRDLMQKIGETMGMTFQLLDDYLDFSE 204


>gi|154508652|ref|ZP_02044294.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798286|gb|EDN80706.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC
           17982]
          Length = 337

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 18/190 (9%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           A+ GGK++R  L   CA L           +    A+E  H  SL HDD+  MD+   RR
Sbjct: 47  AVAGGKRMRPLLTLVCAQLGEPERALDEQVITAATAVELTHLASLYHDDV--MDSAPTRR 104

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P+    +    AI+AG+ L   A  +++S   ++  +          H    + +  G
Sbjct: 105 GVPSAQHLWGNNRAILAGDILFARASLLVASLGPEMVAH----------HARTFERLCEG 154

Query: 163 QMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           Q+ +         +V F +Q +  KTG+L+  A   GA+++ A +   + +  FGE +G+
Sbjct: 155 QLNETFGPTDGADRVDFYLQVLADKTGSLVSTAASFGALLSGAGKLMADVVSDFGEKVGV 214

Query: 220 IFQLADDLLD 229
            FQ+ADD+LD
Sbjct: 215 AFQIADDVLD 224


>gi|149912227|ref|ZP_01900805.1| octaprenyl-diphosphate synthase [Moritella sp. PE36]
 gi|149804686|gb|EDM64738.1| octaprenyl-diphosphate synthase [Moritella sp. PE36]
          Length = 323

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 10/202 (4%)

Query: 34  QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           Q +  L++ + Y ++  GGK+IR  + T  A          + V A IE IH  +L+HDD
Sbjct: 26  QSDVALVNQVGYYIVNGGGKRIRPLIATLSARALGYQGQQHVDVAAIIEFIHTSTLLHDD 85

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D   +RRG+ T +  +    +++ G+ L + +F++++       +N +   +LS  
Sbjct: 86  V--VDESDMRRGRKTANAAFGNAASVLVGDFLYSRSFQMMAKL-----NNSKIIDILSDA 138

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            N+  +G +  Q+++  D   DE +   +   KT  L   A +  A++A    + ++ + 
Sbjct: 139 TNVIAEGEVL-QLMNCNDADTDEKRYMDVIYYKTAKLFEAATQLAAVIAEQPADIEQAMI 197

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +G +LG  FQL DD++D   D
Sbjct: 198 DYGVHLGAAFQLIDDVMDYTSD 219


>gi|147677304|ref|YP_001211519.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
           thermopropionicum SI]
 gi|146273401|dbj|BAF59150.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
           thermopropionicum SI]
          Length = 321

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 19/209 (9%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           ++QT + + T+ +  LL+A      GGK++R  L    A  +N N    L +  A+E IH
Sbjct: 22  VVQTQNPLLTETSTHLLNA------GGKRLRPALCLFGAKFYNYNLEKVLPLAVALELIH 75

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             +L+HDD+  +D    RRG PTV  ++    +   G  L   +  ++S  +   K  I 
Sbjct: 76  MATLVHDDV--VDASMTRRGIPTVKAKWGNSISTHVGTYLFAKSLILLSKYE---KTPII 130

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ-KMKTGALMCFACESGAIMA 200
           ++++ S++       M  G++  I   F      + ++ + K+KT  L+  + + GA   
Sbjct: 131 ARVLSSISVK-----MCEGEIQQISSSFNICQSIKEYLHRIKLKTALLIAASIQLGAAAC 185

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
            A  +    LR +G N+G+ FQ+ DD+LD
Sbjct: 186 GAPVSIHLPLRRYGHNIGMAFQITDDILD 214


>gi|298207668|ref|YP_003715847.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850305|gb|EAP88173.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559]
          Length = 311

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 36/195 (18%)

Query: 50  GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R    FLV +  S  +VN  T  R  A IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 31  GKQMRPMFVFLVAKMVSEGSVNDRT-YRGAAVIELIHTATLVHDDI--VDDSNRRRGFFS 87

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157
           ++  +    A++ G+ LL+                    L+LS+ +N         + ++
Sbjct: 88  INALWKNKIAVLVGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVR 129

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            M  G++L I+      I E   + I K KT  L+   C  GA   + + ++   +R FG
Sbjct: 130 EMSEGELLQIEKARRLDITEDVYYDIIKKKTATLIAACCSLGAASVNPNSDDVTLMRLFG 189

Query: 215 ENLGIIFQLADDLLD 229
           E +G+ FQ+ DDL D
Sbjct: 190 EKIGMAFQIKDDLFD 204


>gi|227486380|ref|ZP_03916696.1| possible trans-hexaprenyltranstransferase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227235561|gb|EEI85576.1| possible trans-hexaprenyltranstransferase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 330

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 8/154 (5%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E  H  SLIHDD+  +D+  +RR   +   +Y +  A+ AG+ ++   F  +++  
Sbjct: 78  AAAVEITHLASLIHDDI--IDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVFSYLANE- 134

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
             L D I+   +++ T      G +G  ++  + + + E + F     KT +     C  
Sbjct: 135 -NLYDEIK---VIANTIKHMCNGEVGQNLIKYRLD-MGEDEYFENISGKTASFFKTVCYF 189

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GA  A   Q + ER+  FGENLG++FQL DDLLD
Sbjct: 190 GARNAGFGQMDTERMVAFGENLGLMFQLKDDLLD 223


>gi|116292709|gb|ABJ97673.1| polyprenyl synthase [uncultured bacterium]
          Length = 328

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L    A L      +     A  + +H  +LIHDD+  +D  Y RRG  +++ 
Sbjct: 49  GKEVRPILTFLSARLLGDIQESTYVAAALTQLLHTATLIHDDV--VDEAYERRGFFSINA 106

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+    +    K   +  + S  +  ++    LQ +   + LDI +
Sbjct: 107 LWKSKAAVLVGDYLLSKGLLVALENKEYDQLQVVSDAVREMSEGELLQ-LEKSRKLDITE 165

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +       F I   KT +L+    + GA+   A+++++E+L+ FGE LG+ FQ+ DDL D
Sbjct: 166 DV-----YFDIIYKKTASLIASCTQLGALSVGATKDQQEKLKRFGECLGVAFQMKDDLFD 220

Query: 230 CEE 232
            E+
Sbjct: 221 YEK 223


>gi|145628195|ref|ZP_01783996.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21]
 gi|144979970|gb|EDJ89629.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21]
          Length = 274

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 86/151 (56%), Gaps = 8/151 (5%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+HDD+  +D   +RRG+ T + ++    +++ G+ + T AF++++    QL
Sbjct: 24  VEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAASVLVGDFIYTRAFQLVA----QL 77

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            ++++   +++   N+  +G +  Q++++ D    E     +   KT  L   A ++ AI
Sbjct: 78  -ESLKILSIMADATNVLAEGEVQ-QLMNVNDPETSEANYMRVIYSKTARLFEVAGQAAAI 135

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +A  ++ +++ L+ +G  LG  FQL DD+LD
Sbjct: 136 VAGGTEAQEKALQDYGRYLGTAFQLVDDVLD 166


>gi|269836542|ref|YP_003318770.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785805|gb|ACZ37948.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 321

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 34/197 (17%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A  FN      L     +E +H  SLIHDD  ++D   +RRG+PT++
Sbjct: 38  GGKRLRPLLLLLAARPFNYVFERLLPAAVGVELLHTASLIHDD--TVDKAMLRRGRPTLN 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             ++  T I+ G+    Y F              RS +M + T N  +  +    +  I 
Sbjct: 96  SLFNTETVILLGD----YIFA-------------RSAMMAAATQNPRVVQVFASSLAHIC 138

Query: 169 DEFIDETQVFMIQKM-------------KTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           D  + E  +F  +++             KT +L   + E GAI+  A+  + + LR FG 
Sbjct: 139 DGQLRE--IFTARELQQSIDDYRKRIFGKTASLFAGSAEMGAILGEANDEQIDALRRFGG 196

Query: 216 NLGIIFQLADDLLDCEE 232
           +LG+ FQ+ DD+LD  E
Sbjct: 197 HLGMAFQIVDDVLDLRE 213


>gi|78188931|ref|YP_379269.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3]
 gi|78171130|gb|ABB28226.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3]
          Length = 324

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 33/203 (16%)

Query: 44  RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L   GK+IR  +V   A+L    + ++ R    +E +H  +LIHDD+  +D   +RR
Sbjct: 37  RYVLKQQGKQIRPAIVLLSANLCGGVNESSYRAAIMVELLHSATLIHDDV--VDGAEMRR 94

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN--------- 153
           G P+++  +    +++ G+ +L                     L+ SL HN         
Sbjct: 95  GLPSINALWKNKISVLMGDYMLARG------------------LLYSLDHNDYGFLHMVS 136

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             ++ M  G++L IQ      I E     +   KT +L+  +C  GA+ A   ++    L
Sbjct: 137 EAVRRMSEGEILQIQKTRSLDITEKDYLSVISDKTASLISSSCAMGAMSATTDESNIAAL 196

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           + +GE LG+ FQ+ DDLLD   D
Sbjct: 197 KNYGEYLGLAFQIRDDLLDYTGD 219


>gi|222151368|ref|YP_002560524.1| component B of hexaprenyl diphosphate synthase [Macrococcus
           caseolyticus JCSC5402]
 gi|222120493|dbj|BAH17828.1| component B of hexaprenyl diphosphate synthase [Macrococcus
           caseolyticus JCSC5402]
          Length = 325

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   V     L        +R   ++E IH  SL+HDD   +DN   RRG  +VH
Sbjct: 43  GGKRVRPMFVLLSGFLAKGEKEHLIRTAVSLELIHMASLVHDDY--IDNSDKRRGNTSVH 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +++ TAI  G+ LL  A E I+         I S+ +L +           G+   + 
Sbjct: 101 MAFNKDTAIRTGHFLLARALENIAEINDSQYHQIFSKTILEVCF---------GEFDQMA 151

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D F   I  T+       KT  L+  +C  GA+  +        ++ FG  +G+ +Q+ D
Sbjct: 152 DRFNYPITFTEYLRRINRKTAILIEASCHLGAVSTNLDSYTTYHVKQFGHCIGMSYQIID 211

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 212 DILDYTSD 219


>gi|317486885|ref|ZP_07945696.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
 gi|316921875|gb|EFV43150.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
          Length = 325

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 20/187 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L          + AA+E  H  +L+HDD+  MDN  +RRG    H
Sbjct: 41  GGKRLRPLLTVLVARLLGYADNDIYPLAAAMEMFHVATLLHDDV--MDNAEMRRGSTATH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +     I+AG+ LL    +I++    P+            L+   +  +     G++L
Sbjct: 99  KVFGVTETILAGDALLAKGNQIVAGFGDPR------------LTAATSDAIAQTANGEIL 146

Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +I ++  +   + +  ++   KT  ++  +C  GA+ A+ +  +      +G NLG+ FQ
Sbjct: 147 EIANQGKNAPDLLIYNQIIAGKTAWMIRTSCNIGAVRANGTPEQVAGATDYGFNLGMAFQ 206

Query: 223 LADDLLD 229
           + DD LD
Sbjct: 207 IVDDALD 213


>gi|16081558|ref|NP_393914.1| bifunctional short chain isoprenyl diphosphate synthase related
           protein [Thermoplasma acidophilum DSM 1728]
 gi|10639606|emb|CAC11578.1| bifunctional short chain isoprenyl diphosphate synthase related
           protein [Thermoplasma acidophilum]
          Length = 322

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 13/193 (6%)

Query: 44  RYAL-LGGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           RY +  GGK+ R  L +    S  +  +   L +    E IH  SLIHDD+  +DN  +R
Sbjct: 34  RYTIEAGGKRFRPLLTILAYESSTDEPYFKILDLATGYELIHTASLIHDDI--IDNSPMR 91

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PT+  +     AI+  + L   A+E+ S         I S++M   +  +    +L 
Sbjct: 92  RGRPTLSYKEGVNNAIVVADYLFAKAYELGSRYGP-----IVSKVMADASSRLAEGQIL- 145

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA-IMAHASQNEKERLRCFGENLGII 220
            + +++ +  I E   + I + KT      AC  GA I A+A  N +  L  F  NLG+ 
Sbjct: 146 -EAVNLGNLNISEDTYYRIIENKTAHFFE-ACARGATIAANADLNTRNMLSGFAFNLGMA 203

Query: 221 FQLADDLLDCEED 233
           FQ+ DD+LD   D
Sbjct: 204 FQVTDDILDITGD 216


>gi|260579301|ref|ZP_05847183.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Corynebacterium jeikeium ATCC 43734]
 gi|258602430|gb|EEW15725.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Corynebacterium jeikeium ATCC 43734]
          Length = 336

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A          +   AA+ E  H  +L HDD+  MD    RRG  + 
Sbjct: 56  GGKRFRVMFALLAAHYGEKPTAQEVHEAAAVVELTHLATLYHDDV--MDESDQRRGAESA 113

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-- 165
           + +++   AI+AG+ L   A EI+++   Q   +               Q ++ GQM   
Sbjct: 114 NKRWNNSVAILAGDYLFAIASEIMATLGAQTVQHFAETF----------QELVTGQMRET 163

Query: 166 ----DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               D +DE   E  + +IQ+ KTG L+  A   GA+ + AS+  +E L  FG N+G IF
Sbjct: 164 IGARDGEDEI--EHYLTVIQE-KTGVLIASAGWLGALHSGASEEHREALFRFGRNVGQIF 220

Query: 222 QLADDLLDCEED 233
           Q+ DD++D   D
Sbjct: 221 QIVDDIIDIWAD 232


>gi|191639239|ref|YP_001988405.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei
           BL23]
 gi|190713541|emb|CAQ67547.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei
           BL23]
 gi|327383318|gb|AEA54794.1| Polyprenyl synthetase [Lactobacillus casei LC2W]
 gi|327386501|gb|AEA57975.1| Polyprenyl synthetase [Lactobacillus casei BD-II]
          Length = 325

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R       +   +V+    + + AAIE +H  +LIHDD+  +D    RR + T+ 
Sbjct: 46  GGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            Q+   TA+ AG+ L    F+++S   + L+         S+  + G ++ +L G++  +
Sbjct: 104 KQFGPDTAVYAGDYLFVVCFKLLSHYASSLR---------SIQQDSGSMEKILKGELDQM 154

Query: 168 QDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +  +  +  ++ Q   KTG L   +C  GA  + +S    +     G N+GI FQL 
Sbjct: 155 ATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEKIGMNIGIAFQLL 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDILDYTSD 223


>gi|194290791|ref|YP_002006698.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424]
 gi|193224626|emb|CAQ70637.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424]
          Length = 345

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A     +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 66  GGKRLRPVILLLTARALGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTAN 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++         ++R   +LS   N+  +G +  Q+L++ 
Sbjct: 124 AVFGNAASVLVGDFLYSRAFQMMVD-----AGSMRIMEILSNATNVIAEGEVL-QLLNMH 177

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + + KT  L   A + GA+++ A    +E    +G  +G  FQL DD+L
Sbjct: 178 DPDVTVERYLQVIRYKTAKLFEAAAQLGAVLSGADAQMEEAAAEYGRRIGTAFQLIDDML 237

Query: 229 D 229
           D
Sbjct: 238 D 238


>gi|262403940|ref|ZP_06080497.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC586]
 gi|262349902|gb|EEY99038.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC586]
          Length = 323

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 22  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 79  ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SLKI 131

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASS 190

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|149184238|ref|ZP_01862556.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
 gi|148831558|gb|EDL49991.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
          Length = 350

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 8/188 (4%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  +    A +F      A R  AA+E +H   LIHDD+   D   +RRG 
Sbjct: 51  YPKRGGKMLRPGICIANALIFGGELTQAARCAAAVELLHNALLIHDDV--QDESDLRRGL 108

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PT+H Q+    AI AG+ LL  AF+ +      L  ++ +Q ++ +T  +  Q   G  +
Sbjct: 109 PTLHAQHGVALAINAGDALLFTAFQPLLDAIRPLGADL-AQRVIEVTIAMARQTAEGQAL 167

Query: 165 -LDIQD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            L  +D    E  +   + M  K      M +  + G +M    + +  R+  FG  LG+
Sbjct: 168 ELGWRDRNVTELTEADYLRMALKKTAWMGMIWPAQLGVLMGGRGRIDPARVVRFGHFLGL 227

Query: 220 IFQLADDL 227
            FQ+ DDL
Sbjct: 228 AFQIEDDL 235


>gi|326329624|ref|ZP_08195946.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Nocardioidaceae bacterium Broad-1]
 gi|325952620|gb|EGD44638.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Nocardioidaceae bacterium Broad-1]
          Length = 337

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 26/214 (12%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECI 82
           +++S   T+    LL A      GGK+ R  LV    EC      + +  +     +E  
Sbjct: 42  RSSSPFVTEAASHLLEA------GGKRFRPLLVLLAAECGPDTLADEV--ITAACIVELT 93

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL-KDN 141
           H  SL HDD+  MD   +RRG+ T + ++D   AI+ G+    + F   SS   +L  D 
Sbjct: 94  HQASLYHDDV--MDEALLRRGEDTANARFDNHVAILTGD----FLFARSSSLTAELGPDA 147

Query: 142 IRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           +R Q      L     L+G+   + +D  D  ++      +   KTG L+  +   GA+ 
Sbjct: 148 VRIQAATFAKLVEGQILEGVAPAEGVDPVDHHLE------VLAGKTGVLIATSALYGALF 201

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A A +  ++ L  +G+ +G+ FQL+DD+LD   D
Sbjct: 202 AGADKEIQDALVAYGDIVGVAFQLSDDILDIASD 235


>gi|319425378|gb|ADV53452.1| Polyprenyl synthetase [Shewanella putrefaciens 200]
          Length = 331

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARTVSYEGDAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L DN+R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DNMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A A+   +  L  +G+ LG  FQL DDLL
Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEHETALGNYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|149199615|ref|ZP_01876648.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155]
 gi|149137268|gb|EDM25688.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155]
          Length = 326

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 17/182 (9%)

Query: 50  GKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK++R  LV      F +     +A ++ A  E IHC SL+HDD+  +D+  +RR  PT+
Sbjct: 50  GKQLRPLLV------FTILGQQTSANKLAAVCESIHCASLVHDDI--IDDCRLRRNLPTM 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +D   A++ G+ + T  F + S   + +     +Q + +L     LQ      +   
Sbjct: 102 NSIHDNSIALLLGDLMFTSIFTLSSCLPSWVTSE-SAQTIKTLIEGELLQQTYKCDIAVT 160

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D+++D     ++QK KTGAL+ F  ++ + +A  + ++ +    +    G+IFQ+ADD 
Sbjct: 161 KDQYLD-----VLQK-KTGALLSFCTKAASRLADKNPDDVQLAGEYANTFGLIFQIADDW 214

Query: 228 LD 229
            D
Sbjct: 215 AD 216


>gi|328949208|ref|YP_004366545.1| polyprenyl synthetase [Treponema succinifaciens DSM 2489]
 gi|328449532|gb|AEB15248.1| Polyprenyl synthetase [Treponema succinifaciens DSM 2489]
          Length = 362

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 21/202 (10%)

Query: 48  LGGKKIRSFLVT----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           LGGK+ R  L+      CA     +   A  +   +E +H  SLIHDD+   D+  +RRG
Sbjct: 56  LGGKRWRPLLLVLCARACAKDKEKSQEAAYLLAPLVEFVHTASLIHDDIE--DSSPVRRG 113

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           KP  +I Y   TAI AG+ L   A   I   +   +LK+ + S  ++ L        +  
Sbjct: 114 KPAAYITYGIDTAINAGSWLYFEAPLCIEKLNCSIELKNRLYSNYLMELRR------LHL 167

Query: 162 GQMLDIQDEFIDETQVFMIQ------KMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GQ +DI     D T+V  +Q      K KTG L   A ++G + ++A +   ++      
Sbjct: 168 GQAMDIA-WHRDNTKVPSVQEYLKMVKGKTGTLASLAAKTGTLASNADEETVKKAGIIAS 226

Query: 216 NLGIIFQLADDLLDCEEDLPKK 237
            +G  FQ+ DD+++     P K
Sbjct: 227 EIGAGFQIIDDVINLTTGNPGK 248


>gi|227533688|ref|ZP_03963737.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|301067307|ref|YP_003789330.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
 gi|227188672|gb|EEI68739.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|300439714|gb|ADK19480.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
          Length = 325

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R       +   +V+    + + AAIE +H  +LIHDD+  +D    RR + T+ 
Sbjct: 46  GGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            Q+   TA+ AG+ L    F+++S   + L+         S+  + G ++ +L G++  +
Sbjct: 104 KQFGPDTAVYAGDYLFVVCFKLLSHYASSLR---------SIQQDSGSMEKILKGELDQM 154

Query: 168 QDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +  +  +  ++ Q   KTG L   +C  GA  + +S    +     G N+GI FQL 
Sbjct: 155 ATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEKIGMNIGIAFQLL 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDILDYTSD 223


>gi|281204458|gb|EFA78653.1| hypothetical protein PPL_08108 [Polysphondylium pallidum PN500]
          Length = 417

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)

Query: 33  TQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIH 83
           TQ    LL +I   Y  + GK+IR  ++   A     N   +       L++   +E +H
Sbjct: 91  TQLTHPLLKSIGTYYFEMKGKRIRPTVLLLLARAITSNDCPSEPISESQLKLAQVVEMLH 150

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+HDD+  +D    RR   +V+  Y    AI+ GN L      ++S+        +R
Sbjct: 151 TASLVHDDV--IDGADTRREMASVNCAYSNKLAILCGNFLTARTIVLLST--------LR 200

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           +  +  L  NI +  ++ G+++ I+              +KT +L    C S A+++ A 
Sbjct: 201 NHHVTELVSNI-ISDLVDGELMQIKSNSTSFESYIRKTYLKTASLFANGCRSIAVLSGAD 259

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
            N       FG+NLG+ FQ+ DDLLD
Sbjct: 260 ANMTNMATEFGKNLGLAFQIIDDLLD 285


>gi|317128581|ref|YP_004094863.1| heptaprenyl diphosphate synthase component II [Bacillus
           cellulosilyticus DSM 2522]
 gi|315473529|gb|ADU30132.1| heptaprenyl diphosphate synthase component II [Bacillus
           cellulosilyticus DSM 2522]
          Length = 323

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR   V   A     N      +G A+E IH  SL+H     +D+  +RRGK T+ 
Sbjct: 43  GGKRIRPVFVLLSAQFGEYNIEEIKNIGVALEMIHMASLVH--DDVVDDADLRRGKKTIK 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   A+  G+ +   A EI +   T     I S  ++          M  G++  I+
Sbjct: 101 SKWDNRVAMYTGDYIFAKAVEIATYYDTPDIHKILSHALVE---------MCIGEVEQIR 151

Query: 169 DEFIDETQ----VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           D++ D  Q     F   K KT  L+  +C+ GAI + A +     L  FG N+G+ FQ+ 
Sbjct: 152 DQY-DWNQNLRMYFRRIKRKTALLIAISCQLGAIASGAPEAHVRALSRFGYNVGMAFQIT 210

Query: 225 DDLLD 229
           DD+LD
Sbjct: 211 DDILD 215


>gi|320536785|ref|ZP_08036784.1| polyprenyl synthetase [Treponema phagedenis F0421]
 gi|320146361|gb|EFW37978.1| polyprenyl synthetase [Treponema phagedenis F0421]
          Length = 349

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 20/204 (9%)

Query: 41  SAIRYALLGGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           S I +   GGK IR       A L    F+ +    +   AA+E +H  +L+HDD+  +D
Sbjct: 61  SLIEFLHAGGKLIRPVFFLLFAHLGEETFDSDP-AIIETAAALELLHMATLVHDDI--ID 117

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG  ++   + +  A+ AG+ LLT  F +I+        NI  + +L +     +
Sbjct: 118 NSPLRRGIASIQNIHGKSIAVYAGDYLLTVFFTLIAK-------NISDKELL-VQSAASM 169

Query: 157 QGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           Q +L G++   + +F  E  V   F I + KT  L   +C  G   A  ++  +E+ +  
Sbjct: 170 QRLLEGELHQYRMKFNPEITVSDYFQIIEGKTAELFYLSCYLGISFAK-NKTYQEQAKRI 228

Query: 214 GENLGIIFQLADDLLDCEEDLPKK 237
           G+N+G  FQ+ DD+LD  ++LP+K
Sbjct: 229 GKNIGCAFQIIDDILDY-DNLPQK 251


>gi|257078168|ref|ZP_05572529.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1]
 gi|256986198|gb|EEU73500.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1]
          Length = 328

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 70  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGKIGENIGLAFQIIDDILD 220


>gi|307328645|ref|ZP_07607818.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
           4113]
 gi|306885757|gb|EFN16770.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
           4113]
          Length = 336

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   + +    +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVLLAAQFGDPHAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVSSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L+  
Sbjct: 111 VRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160

Query: 169 D--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              +  D  + ++ +   KTG+L+  +   GA+M+ A ++    L  +GE LG+ FQLAD
Sbjct: 161 GPRDGRDPVEHYLDVLAGKTGSLIAVSGRFGAMMSGADESIVSILTQYGERLGMAFQLAD 220

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 221 DVLDIASD 228


>gi|289613953|emb|CBI59187.1| unnamed protein product [Sordaria macrospora]
          Length = 444

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 186 RLAEITELIHTASLLHDDV--IDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALA- 242

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L+     +L+ ++  N     ++ G+ + +++        ++ +ET  + +QK  +
Sbjct: 243 ---RLRHAEVVELLATVIAN-----LVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYL 294

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++  A     +    +G+NLG+ FQL DD+LD
Sbjct: 295 KTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLD 340


>gi|315283868|ref|ZP_07871917.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL
           S4-120]
 gi|313612487|gb|EFR86580.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL
           S4-120]
          Length = 288

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 8   GGKLLRPAFALLSAQAGPDFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 65

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI        + NI  + +L G++  +
Sbjct: 66  HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIEFN-----SKNI--EKILMGELDQM 117

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + AS+    +    G  LG+ FQ+ 
Sbjct: 118 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGASGSKASRLTVAKCYNIGHYLGMAFQII 177

Query: 225 DDLLD 229
           DD+LD
Sbjct: 178 DDVLD 182


>gi|326772137|ref|ZP_08231422.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Actinomyces viscosus C505]
 gi|326638270|gb|EGE39171.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Actinomyces viscosus C505]
          Length = 369

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 37/249 (14%)

Query: 1   MNGGLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           M G LP    E   RI   L   +D L++  +      N         A  GGK++R  L
Sbjct: 1   MIGSLPLSAPELESRIIPALQTIEDRLMEVVTSADETINP---PTSHLAEAGGKRLRPVL 57

Query: 58  VTECASLFNVNHLTA----LR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
               A L +   L A    +R  G A+E  H  +L HDD+  MD   +RRG P+    + 
Sbjct: 58  ALLTAQLGD-PALAATGEEIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWG 114

Query: 113 EVTAIIAGNGLLTYAFEIISS--PKTQL---KDNIR---SQLMLSLTHNIGLQGMLGGQM 164
              AI+ G+ L+  A +++++  P+  +   K   R    QL  +L    G         
Sbjct: 115 NSAAILTGDVLVARASQLVAALGPEAVMAHAKTFERLCMGQLHETLPRPAGT-------- 166

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            D  D +I   QV      KTG+L+  +   GA++  A    ++ +  FGE +G+ FQLA
Sbjct: 167 -DPVDHYI---QVL---ADKTGSLIAVSARYGAMLTGAGTRTEQIVEEFGERIGVAFQLA 219

Query: 225 DDLLDCEED 233
           DD++D   D
Sbjct: 220 DDVIDLMSD 228


>gi|299821639|ref|ZP_07053527.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601]
 gi|299817304|gb|EFI84540.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601]
          Length = 323

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L      + ++  A A+E IH  S++HDD+  +DN  +RRG+ T+
Sbjct: 44  GGKRIRPLFVCLTARLTEKPDQSKMKYAAVAVELIHMASIVHDDV--VDNASLRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + + +    T +K+    +++ S+T  +       G++  +
Sbjct: 102 KSRWGNHIAMYTGDYLFAKSLDYM----TNIKEIEAHEMLASVTVELAT-----GEIEQL 152

Query: 168 QDEFIDETQVFMIQ----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           + ++ D TQ         K KT  L+  +C  GA+++       ++L  FG  +G+ FQ+
Sbjct: 153 KSKY-DVTQSIRTYLRRIKRKTALLIAVSCGLGAVISGQDAATTKKLYQFGYYVGMAFQI 211

Query: 224 ADDLLD 229
            DD+LD
Sbjct: 212 QDDVLD 217


>gi|153874225|ref|ZP_02002523.1| Polyprenyl synthetase [Beggiatoa sp. PS]
 gi|152069311|gb|EDN67477.1| Polyprenyl synthetase [Beggiatoa sp. PS]
          Length = 337

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A  F       + + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 44  GGKRLRPMLLLLSARAFAYQGTHHIDLAAIVEFIHTATLLHDDV--VDASLLRRGQETAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        +N+R   +LS   N+  +G +  Q+L+  
Sbjct: 102 NIWGNEASVLVGDFLYSRAFQMMVDI-----NNMRVMKILSEATNVMAEGEVL-QLLNCY 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GA+++      ++ +  +G +LGI FQL DD L
Sbjct: 156 EPDTTEMDYLRVICAKTAKLFEAAAQLGAVISEQPSEYEKAMAMYGMHLGIAFQLIDDAL 215

Query: 229 D 229
           D
Sbjct: 216 D 216


>gi|328774161|gb|EGF84198.1| hypothetical protein BATDEDRAFT_29284 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 356

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 23/171 (13%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+    E IH  SL+HDD+  +D    RR  P+V+ ++    AI+AG+ LL  A   
Sbjct: 93  TQRRLAEITEMIHTASLLHDDV--IDISMTRRNTPSVNAEFGNKMAILAGDFLLARA--- 147

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----------DETQVFM 179
            S    +L+D    +L+ ++  N     ++ G+ + +++  +           D  Q +M
Sbjct: 148 -SVALARLRDPRVVELLSTVISN-----LVEGEFMQLRNSALGGSKSAYSAVHDRFQYYM 201

Query: 180 IQK-MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +  MKT +L+  +C S A++   + +  E    +G NLG+ FQL DD++D
Sbjct: 202 EKTYMKTASLIAISCRSSAVLGGCTDDVIESAYLYGRNLGLAFQLVDDMMD 252


>gi|68536956|ref|YP_251661.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
           K411]
 gi|68264555|emb|CAI38043.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
           K411]
          Length = 353

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A          +   AA+ E  H  +L HDD+  MD    RRG  + 
Sbjct: 73  GGKRFRVMFALLAAHYGEKPTAQEVHEAAAVVELTHLATLYHDDV--MDESDQRRGAESA 130

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-- 165
           + +++   AI+AG+ L   A EI+++   Q   +               Q ++ GQM   
Sbjct: 131 NKRWNNSVAILAGDYLFAIASEIMATLGAQTVQHFAETF----------QELVTGQMRET 180

Query: 166 ----DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               D +DE   E  + +IQ+ KTG L+  A   GA+ + AS+  +E L  FG N+G IF
Sbjct: 181 IGARDGEDEI--EHYLTVIQE-KTGVLIASAGWLGALHSGASEEHREALFRFGRNVGQIF 237

Query: 222 QLADDLLDCEED 233
           Q+ DD++D   D
Sbjct: 238 QIVDDIIDIWAD 249


>gi|309812382|ref|ZP_07706137.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
 gi|308433687|gb|EFP57564.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
          Length = 342

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 40/231 (17%)

Query: 9   LQENSKRIDTILD--DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           L+  + R+D ++D    L++ ASH        L+ A      GGK+ R  L    + L  
Sbjct: 34  LERVNARLDVVVDHDSPLVREASH-------HLVDA------GGKRFRPMLTLLTSMLGT 80

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 +   A +E  H  SL HDD+  MD   IRRG P+ +  Y   TAI+ G+ L   
Sbjct: 81  GISDEVVDAAAGVELTHLASLYHDDV--MDEADIRRGVPSANAVYGNSTAILIGDLLFGK 138

Query: 127 AFEIIS--SPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179
           A E+I+   P+    Q +  +R               +  GQ+ D +   +  D  + ++
Sbjct: 139 ASELIAHLGPEAVILQARTFVR---------------LCAGQIEDERQTPDGADPMEYYL 183

Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +   KTG L+  A + GA+ +   +   E L  +GE +G++FQL+DD+LD
Sbjct: 184 KVLADKTGVLIAAAAQYGAMFSGCDERTVEVLGRYGELVGLVFQLSDDILD 234


>gi|21232167|ref|NP_638084.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767704|ref|YP_242466.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188990821|ref|YP_001902831.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris
           pv. campestris str. B100]
 gi|21113920|gb|AAM42008.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573036|gb|AAY48446.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732581|emb|CAP50775.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris
           pv. campestris]
          Length = 332

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV         +     ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGHAAGGSGPEHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ + A    ++ L  +G  LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGADAQVQQCLYDYGMQLGFAFQIADDVL 224

Query: 229 DCEED 233
           D   D
Sbjct: 225 DYAAD 229


>gi|46908813|ref|YP_015202.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226225186|ref|YP_002759293.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes Clip81459]
 gi|254931090|ref|ZP_05264449.1| polyprenyl synthetase [Listeria monocytogenes HPB2262]
 gi|46882086|gb|AAT05379.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225877648|emb|CAS06362.1| Putative heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293582635|gb|EFF94667.1| polyprenyl synthetase [Listeria monocytogenes HPB2262]
 gi|328469814|gb|EGF40731.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes 220]
 gi|332313071|gb|EGJ26166.1| Polyprenyl synthetase [Listeria monocytogenes str. Scott A]
          Length = 326

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|229490364|ref|ZP_04384205.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
           SK121]
 gi|229322654|gb|EEN88434.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
           SK121]
          Length = 379

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 94/212 (44%), Gaps = 37/212 (17%)

Query: 45  YALLGGKKIR-SFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R SF  T            N    +R  AA+E +   +L+HDD+  +D   
Sbjct: 64  FVLRGGKRVRPSFAWTGWLGAGGDPNGKNADAVIRACAALELVQACALVHDDI--IDAST 121

Query: 100 IRRGKPTVHIQYD----------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG PTVH++++                E  AI+ G+  L +A ++I       +   R
Sbjct: 122 TRRGFPTVHVEFENQHRDEEWSGDSAHFGEAVAILLGDLALAWADDMIRESGISPEAAAR 181

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMCFACES----G 196
              + S         +LGGQ LDI +E   DET      + + KT A   +  E     G
Sbjct: 182 VSPVWSAMRT----EVLGGQFLDISNEARGDETVEAAMRVNRYKTAA---YTIERPLHLG 234

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A +  A     +  R FG ++GI FQL DDLL
Sbjct: 235 AALFGADAELVDAYRTFGTDIGIAFQLRDDLL 266


>gi|157374092|ref|YP_001472692.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3]
 gi|157316466|gb|ABV35564.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3]
          Length = 323

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLSILAARAIDYKGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L  N+    +L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELG-NMEVLEVLADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEESYMRVIYCKTAKLFEAATRLAGVLAQSPIEAQNALADYGKFLGTAFQLTDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|116495752|ref|YP_807486.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
 gi|239630159|ref|ZP_04673190.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|116105902|gb|ABJ71044.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
 gi|239527771|gb|EEQ66772.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
          Length = 320

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 15/189 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R       +   +V+    + + AAIE +H  +LIHDD+  +D    RR + T+ 
Sbjct: 41  GGKLLRPAYCLLFSRFQDVDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            Q+   TA+ AG+ L    F+++S   + L+         S+  + G ++ +L G++  +
Sbjct: 99  KQFGPDTAVYAGDYLFVVCFKLLSHYASSLR---------SIQQDSGSMEKILKGELDQM 149

Query: 168 QDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +  +  +  ++ Q   KTG L   +C  GA  + +S    +     G N+GI FQL 
Sbjct: 150 ATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYESGSSPTFAKNAEKIGMNIGIAFQLL 209

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 210 DDILDYTSD 218


>gi|47093810|ref|ZP_00231556.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254824998|ref|ZP_05229999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854153|ref|ZP_05243501.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503]
 gi|254991862|ref|ZP_05274052.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes FSL J2-064]
 gi|255519631|ref|ZP_05386868.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes FSL J1-175]
 gi|300763608|ref|ZP_07073606.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017]
 gi|47017807|gb|EAL08594.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258607545|gb|EEW20153.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503]
 gi|293594238|gb|EFG01999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515885|gb|EFK42934.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017]
          Length = 326

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|319786423|ref|YP_004145898.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464935|gb|ADV26667.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 335

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  LV         +  T     ++ A IE IH  +L+HDD+  +D   +RRG+ 
Sbjct: 53  GGKRLRPMLVVLAGQATATSLGTTADHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGRS 110

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T +  +    +++ G+ L + +F+++     +L      Q++   T+ I    +L  Q+L
Sbjct: 111 TANAIWGNAASVLVGDFLYSRSFQLM----VELDRMEVMQILADTTNRIAEGEVL--QLL 164

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            +++   DE     + + KT  L       GA+ + A  + ++ L  +G  LG  FQ+AD
Sbjct: 165 HVRNPDTDEAAYLRVIERKTAVLFAAGTRLGALASCADADTQQALYDYGMALGYAFQIAD 224

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 225 DVLDYTAD 232


>gi|256396778|ref|YP_003118342.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363004|gb|ACU76501.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 351

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     IE  H  +L HDD+  MD   +RRG  + +
Sbjct: 68  GGKRTRPLLVLLAAQFGDAARAGVVEAAVVIELTHLATLYHDDV--MDEAALRRGVASAN 125

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D   AI++G+ L   A  ++S       D +R Q           + ++ GQ+ +  
Sbjct: 126 QRWDNSLAILSGDFLFARASTLLSELG---PDAVRIQAET-------FERLVSGQISESV 175

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                +  V     +   KTG+L+  A   GA+ A  +  ++  L  FGE  G+ FQL+D
Sbjct: 176 GPKNGQNPVDHHLEVLAGKTGSLIATAARFGAMFAGCTAEQERILADFGELFGVAFQLSD 235

Query: 226 DLLD 229
           DLLD
Sbjct: 236 DLLD 239


>gi|260878015|ref|ZP_05890370.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034]
 gi|260896382|ref|ZP_05904878.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466]
 gi|308085175|gb|EFO34870.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466]
 gi|308090006|gb|EFO39701.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034]
 gi|328471899|gb|EGF42776.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 10329]
          Length = 323

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L      QLM S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELGSMKILQLM-SNAVNVIAEGEVQ-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|268592839|ref|ZP_06127060.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131]
 gi|291311626|gb|EFE52079.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131]
          Length = 323

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          +     +V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+A+A+  +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPNITEENYMQVIYSKTARLFEAAAHASAILANATPEQEKALQDYGRYIGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|332299227|ref|YP_004441148.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176290|gb|AEE11980.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM
           20707]
          Length = 327

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 16/193 (8%)

Query: 47  LLGGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L  GK IR  +V  CA L     N  T L     IE +H  SLIHDD+  +D    RRG+
Sbjct: 44  LSSGKHIRPIIVGLCAQLCAGQTNEQT-LSAALVIELLHTASLIHDDV--IDWSDTRRGQ 100

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG- 162
           PT++  Y    A++ G+ +L+ AF E++S   T          ML +    G    +G  
Sbjct: 101 PTLNALYSNHQAVLMGDYVLSTAFLELVSREHTPE--------MLRVVAQAGRDLSIGEL 152

Query: 163 -QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            Q+   +     E   + +   KTGAL   + + GA+   A++ + +R    G+ +G  F
Sbjct: 153 MQLSLSKAHTYREEDYYAVVDRKTGALFEASAKLGALSVDATEEQVKRCSRLGQLMGRAF 212

Query: 222 QLADDLLDCEEDL 234
           QL DDL D +  L
Sbjct: 213 QLQDDLFDYDTAL 225


>gi|255038819|ref|YP_003089440.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951575|gb|ACT96275.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
          Length = 326

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V   A +      +  R GA IE +H  +L+HDD+  +D+   RRG  +V+ 
Sbjct: 48  GKQLRPMFVFLSAGVCGNISESTYRGGAMIELLHTATLVHDDV--VDDSNYRRGFFSVNA 105

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+    ++S    + K       +L +  +  ++ +  G++L I+ 
Sbjct: 106 LWKNKIAVLVGDYLLSRGL-LLSVDHEEFK-------ILKIV-STAVRELSEGELLQIEK 156

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                I+E   + I + KT +L+   C  GA    A++   +++  FGE +G+ FQ+ DD
Sbjct: 157 ARRLDINEEVYYEIIRQKTASLIASCCAVGASSVGAAKEVVDKMHAFGEKVGMAFQIKDD 216

Query: 227 LLDCEED 233
           L D  ED
Sbjct: 217 LFDYGED 223


>gi|323448818|gb|EGB04712.1| hypothetical protein AURANDRAFT_32168 [Aureococcus anophagefferens]
          Length = 320

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 20/192 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGKKIR+ +V   A  F      +LR   +   IE IH  SL HDD+  +D   +RRG  
Sbjct: 34  GGKKIRATMVLLTARAFRKGRGRSLRQRKLAEIIEIIHTASLFHDDV--IDGADVRRGCL 91

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +V  ++ +  A++AG+ LL  A   ++    +L++    +L+     ++ ++ ++ G+++
Sbjct: 92  SVSAKFGDKIAVLAGDFLLARACVALA----KLENLAVVELI-----SVVIEHLVRGEIV 142

Query: 166 DIQDE-FIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            ++ E    +T   +   +     KTG+LM  AC + A++   +Q   +    +G ++G+
Sbjct: 143 QMRPESHSSDTHTLLEAYLHKSFYKTGSLMANACRAAALLEDETQANCDAAFAYGRHVGL 202

Query: 220 IFQLADDLLDCE 231
            FQL DD LD E
Sbjct: 203 AFQLVDDALDFE 214


>gi|229512636|ref|ZP_04402105.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TMA 21]
 gi|229350313|gb|EEO15264.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TMA 21]
          Length = 323

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 22  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 79  ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 131

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|28897101|ref|NP_796706.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|28805310|dbj|BAC58590.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 333

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 53  GGKRLRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L      QLM S   N+  +G +  Q+++  
Sbjct: 111 AAFGNAASVLVGDFIYTRSFQMM----TELGSMKILQLM-SNAVNVIAEGEVQ-QLMNCN 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  L+ +G+ LG  FQL DD++
Sbjct: 165 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVM 224

Query: 229 DCEED 233
           D   D
Sbjct: 225 DYTSD 229


>gi|296268287|ref|YP_003650919.1| trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833]
 gi|296091074|gb|ADG87026.1| Trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833]
          Length = 331

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R+ LV   A   +      +     IE  H  +L HDD+  MD   +RRG P+ +
Sbjct: 53  GGKRFRAMLVLLAAQFGDPKAPAVVPGAVVIELTHLATLYHDDV--MDQAPMRRGLPSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
            ++ +  AI+ G+ L   A EI++    +    IR Q             ++ GQ+ +  
Sbjct: 111 ARFGDTVAILTGDYLFAQASEILADLGAE---AIRVQART-------FSRLVRGQIRETI 160

Query: 168 -QDEFIDE-TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              E +D  T    +   KTG+L+  +   GA+++ A +  ++RL    E +G+ +QL D
Sbjct: 161 GPPEGMDPITHYLQVLADKTGSLIATSGRFGAMLSGAPREVEDRLAGACEAIGVAWQLGD 220

Query: 226 DLLDCEED 233
           D++D   D
Sbjct: 221 DIIDVVSD 228


>gi|302504938|ref|XP_003014690.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371]
 gi|302660502|ref|XP_003021930.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517]
 gi|327306145|ref|XP_003237764.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS
           118892]
 gi|291177996|gb|EFE33787.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371]
 gi|291185850|gb|EFE41312.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517]
 gi|326460762|gb|EGD86215.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS
           118892]
          Length = 427

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   I+ 
Sbjct: 169 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIA- 225

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183
              +L+D    +L+ ++  N     ++ G+ + +++  +DE+          + +QK  +
Sbjct: 226 ---RLRDPEVIELLGTVMAN-----LVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYL 277

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K+ +L+  +C + A++  +  +  E    FG NLG+ FQL DD+LD
Sbjct: 278 KSASLISKSCRAAALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLD 323


>gi|256960580|ref|ZP_05564751.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96]
 gi|293384419|ref|ZP_06630300.1| polyprenyl synthetase [Enterococcus faecalis R712]
 gi|312906571|ref|ZP_07765571.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
 gi|256951076|gb|EEU67708.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96]
 gi|291078267|gb|EFE15631.1| polyprenyl synthetase [Enterococcus faecalis R712]
 gi|310627219|gb|EFQ10502.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
          Length = 328

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 70  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220


>gi|328468126|gb|EGF39132.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes 1816]
          Length = 302

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 22  GGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 79

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI        + NI  + +L G++  +
Sbjct: 80  HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIEFN-----SKNI--EKILMGELDQM 131

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ 
Sbjct: 132 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 191

Query: 225 DDLLD 229
           DD+LD
Sbjct: 192 DDVLD 196


>gi|326476521|gb|EGE00531.1| hexaprenyl pyrophosphate synthetase [Trichophyton tonsurans CBS
           112818]
 gi|326484900|gb|EGE08910.1| hexaprenyl pyrophosphate synthetase Coq1 [Trichophyton equinum CBS
           127.97]
          Length = 491

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   I+ 
Sbjct: 233 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIA- 289

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183
              +L+D    +L+ ++  N     ++ G+ + +++  +DE+          + +QK  +
Sbjct: 290 ---RLRDPEVIELLGTVMAN-----LVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYL 341

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K+ +L+  +C + A++  +  +  E    FG NLG+ FQL DD+LD
Sbjct: 342 KSASLISKSCRAAALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLD 387


>gi|227517154|ref|ZP_03947203.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX0104]
 gi|229547906|ref|ZP_04436631.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           ATCC 29200]
 gi|307288086|ref|ZP_07568100.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
 gi|227075377|gb|EEI13340.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX0104]
 gi|229306927|gb|EEN72923.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           ATCC 29200]
 gi|306500928|gb|EFM70244.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
          Length = 328

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 70  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220


>gi|120612320|ref|YP_971998.1| trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1]
 gi|120590784|gb|ABM34224.1| Trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1]
          Length = 344

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 8/183 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   +            + A IE IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 65  GGKRLRPALLLLMSGALGYQEAQRFNLAAVIEFIHTATLLHDDV--VDESTMRRGRPTAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        D++R   +LS   NI  +G +  Q+++  
Sbjct: 123 ENFGNPASVLVGDFLHSRAFQMMVD-----ADDMRVMQILSEATNIIAEGEVQ-QLMNTH 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   +    A++A A    +E    +G+ LG  FQ+ DD+L
Sbjct: 177 DATLDEQGYLEVIRSKTAKLFEASARLAAVLARAPAAIEEACAEYGKALGTAFQVIDDVL 236

Query: 229 DCE 231
           D +
Sbjct: 237 DYD 239


>gi|183600352|ref|ZP_02961845.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827]
 gi|188020143|gb|EDU58183.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827]
          Length = 323

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          +    ++V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAGRSLGYSGQKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPNITEENYMQVIYSKTARLFEAAAHASAILASATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|220915526|ref|YP_002490830.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953380|gb|ACL63764.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 349

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 20  LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           L + LL+  + +     D   +L +A R+ +  GGK+IR  +              A+  
Sbjct: 35  LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A E  H  +L+HDD+  +D+G +RRG+P   + +    ++++G+ LLT A EI+S+  
Sbjct: 95  AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSA-- 150

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKM-KTGALMCFA 192
               +  RS  +  L     ++ ++ G++  L ++  F    Q +M   M KT +L  +A
Sbjct: 151 ----EPARSAALPPLLAT--MRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWA 204

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +GA  A         L  FGE +G+ FQL DD LD   D
Sbjct: 205 AAAGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAAD 245


>gi|116334218|ref|YP_795745.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
           367]
 gi|116099565|gb|ABJ64714.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
           367]
          Length = 325

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 18/224 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T L D LL+T        + ++L+ ++    GGK +R       ++  N      L+ GA
Sbjct: 17  TALQDYLLRTVQLDNQPIHHKILALLKS---GGKLLRPGYFYLFSTFGNATTPAQLQAGA 73

Query: 78  A-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SS 133
           A IE +H  +LIHDD+  +D+   RRG  T+ + Y +  AI AG+ + T  F+ +   ++
Sbjct: 74  AAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYAGDFMFTVYFDQVLQSTT 131

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            ++ ++++I +   +       LQG L    L+ +++   +  +  I   KT  L   +C
Sbjct: 132 DRSLIQNHIDAMRRI-------LQGELHQMDLNYREDITLDAYLNEIAG-KTAELFALSC 183

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
             GA +A A Q+  +  R  G  +G  +Q+ DD+LD   D PKK
Sbjct: 184 YQGAQLAGAPQSVIDHTREIGIAIGCAYQMLDDILDYAGD-PKK 226


>gi|312883913|ref|ZP_07743630.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368371|gb|EFP95906.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 323

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 10/202 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q   +  L++ + + ++  GGK++R  L    A              A IE IH  +L
Sbjct: 22  HAQLNSDVTLINQLGFYIVSGGGKRVRPLLAIISAKALGYKGQGHTLSAAFIEFIHTATL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   +
Sbjct: 82  LHDDV--VDESDMRRGKATANSAFGNAASVLVGDYIYTRSFQMM----TELG-SMKILKL 134

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  D  + E     +   KT  L   A + GA+++ A    +
Sbjct: 135 MSDAVNVIAEGEVQ-QLMNCNDPNVSEESYMQVIYSKTARLFEVATQVGAVLSEAPSEIE 193

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
             L+ +G  LG  FQL DD++D
Sbjct: 194 IALKNYGRYLGTAFQLIDDVMD 215


>gi|34499409|ref|NP_903624.1| bifunctional short chain isoprenyl diphosphate [Chromobacterium
           violaceum ATCC 12472]
 gi|34105261|gb|AAQ61616.1| Bifunctional short chain isoprenyl diphosphate [Chromobacterium
           violaceum ATCC 12472]
          Length = 338

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 21/231 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG---------GKKIRSFLVTECASLFN 66
           ID +     L+TA  +  + ++ +L A++ A L          GK +R FLV      F 
Sbjct: 5   IDRLASRPYLETA--LGARLSEAMLQAVKDAWLDPYRSYHNRMGKMLRPFLVCSVMQAFE 62

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +      V A  E IH  SL+ DD+   D+  +RRG PT H Q     A  AG+  L  
Sbjct: 63  RDPRRTPVVVAIAEIIHAASLVLDDV--ADDSPLRRGGPTAHRQVGVRVAGAAGSAWLNA 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
            F+++++  + L+     +L   +     + G+  G  +D    +   +D T    +Q +
Sbjct: 121 CFQLLAADDSGLEPEQAQRLADEIAWEHWVTGV--GTTIDTTWPWMGRLDGTPAQYLQSV 178

Query: 184 ---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
               T        + GAI A AS  +  +    GE LGI FQ+ DD+L+ +
Sbjct: 179 VHRSTSYTYRLPLKLGAIAAGASPQQTAQFAALGEELGIAFQIIDDILNVQ 229


>gi|86475810|dbj|BAE78987.1| Probable geranyl diphosphate synthase [Streptomyces sp. KO-3988]
          Length = 352

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 40/207 (19%)

Query: 49  GGKKIR-SFLVTE-CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR +F +T   A+  +      +  GAA+E +H  +L+HDD+  +D+   RRG PT
Sbjct: 60  GGKRIRPAFCITGYLAAGGDPAEPGIVAAGAALEMLHLSALVHDDV--LDDSSSRRGVPT 117

Query: 107 VHIQ----------------YDEVTAIIAGNGLLTYAFEIIS-SPKTQLKD--NIRSQLM 147
           VH Q                Y E  AI+ G+  L Y+ E+++ +P+  L +   +RS++M
Sbjct: 118 VHTQAMALHESSGWQGEPRRYGEGVAILVGDLALVYSEELMAEAPRRVLPEWNKLRSEVM 177

Query: 148 LSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCF-ACESGAIMAHAS 203
           +             GQ +D+    EF +D     +I ++K+G          GA      
Sbjct: 178 I-------------GQYMDVHAAAEFSVDPRSSRLIARIKSGRYTIHRPLVVGAKRGRGR 224

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
            +    L  +GE +G  FQL DDLLD 
Sbjct: 225 GDLAPALEEYGEAVGEAFQLRDDLLDA 251


>gi|85094730|ref|XP_959949.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A]
 gi|60389720|sp|Q7S565|COQ1_NEUCR RecName: Full=Probable hexaprenyl pyrophosphate synthase,
           mitochondrial; Short=HPS; Flags: Precursor
 gi|28921406|gb|EAA30713.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A]
          Length = 449

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 191 RLAEITELIHTASLLHDDV--IDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALA- 247

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
              +L+     +L+ ++  N     ++ G+ + +++        ++ +ET  + +QK  +
Sbjct: 248 ---RLRHAEVVELLATVIAN-----LVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYL 299

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++  A     +    +G+NLG+ FQL DD+LD
Sbjct: 300 KTASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLD 345


>gi|153802102|ref|ZP_01956688.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3]
 gi|124122346|gb|EAY41089.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3]
          Length = 348

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 47  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 103

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 104 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 156

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 157 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 215

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 216 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 244


>gi|258623396|ref|ZP_05718400.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573]
 gi|258584362|gb|EEW09107.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573]
          Length = 348

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 10/206 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q   +  L++ + + ++  GGK++R  L    A     +        A IE IH  +L
Sbjct: 47  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHGSHHTTAAAFIEFIHTATL 106

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   +
Sbjct: 107 LHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKL 159

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS   +
Sbjct: 160 MSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVE 218

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             ++ +G+ LG  FQL DD++D   D
Sbjct: 219 LAMQNYGKYLGTAFQLIDDVMDYTSD 244


>gi|255974147|ref|ZP_05424733.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2]
 gi|256617997|ref|ZP_05474843.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200]
 gi|257083089|ref|ZP_05577450.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1]
 gi|257417357|ref|ZP_05594351.1| trans-hexaprenyltranstransferase [Enterococcus faecalis AR01/DG]
 gi|257418078|ref|ZP_05595072.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11]
 gi|300861510|ref|ZP_07107594.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
 gi|255967019|gb|EET97641.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2]
 gi|256597524|gb|EEU16700.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200]
 gi|256991119|gb|EEU78421.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1]
 gi|257159185|gb|EEU89145.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ARO1/DG]
 gi|257159906|gb|EEU89866.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11]
 gi|300848971|gb|EFK76724.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
 gi|315144088|gb|EFT88104.1| polyprenyl synthetase [Enterococcus faecalis TX2141]
          Length = 328

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 70  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220


>gi|206603458|gb|EDZ39938.1| Trans-hexaprenyltranstransferase [Leptospirillum sp. Group II
           '5-way CG']
          Length = 330

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  L  +    S ++  H++ L   A +E IH  +L+HDD+  +D+  +RRGK +
Sbjct: 49  GGKRLRPLLMIIASRISGYSGPHISLL--SAVVEFIHTATLLHDDV--VDHAEMRRGKLS 104

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +   TA++ G+ L   A  + +       ++  +     ++    L+ +L   +  
Sbjct: 105 ANQIWGNQTAVLVGDYLYATALWMATGVHNHEINDTLTLACRKMSEGEVLELILDNNLSA 164

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++++++      + + KT AL    C  GAI+  A   +K+ L  FG N+G+ FQ+ADD
Sbjct: 165 REEDYLN------VVECKTAALTAGTCRIGAILGGADPEKKKSLEDFGYNIGMSFQIADD 218

Query: 227 LLD 229
            LD
Sbjct: 219 ALD 221


>gi|322367991|ref|ZP_08042560.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus
           DX253]
 gi|320552007|gb|EFW93652.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus
           DX253]
          Length = 276

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 15/216 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T+++D L +    ++ +     L+    AL GGK++R  +          +   A+  G 
Sbjct: 5   TLVEDRLEEVVERVEPRELSEQLA--HTALSGGKRVRPTVAMLACEAAGGDAENAVDFGV 62

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            IE +H  SL+ DD+  +D   +RRG  +   +Y    AIIA +G+L  AFE+ SS    
Sbjct: 63  GIELVHDASLVVDDI--IDRSDVRRGTESAWAEYGYGRAIIASDGMLGEAFELFSSDPRA 120

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
           ++  + ++ M+ L       GM  G+  ++     ++++   + + KTGAL   A E GA
Sbjct: 121 ME--VVAESMIEL-------GM--GEASELVATPSNQSEYMELARRKTGALFRAAAELGA 169

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I A A     +    + E +GI FQ+ DD+LD   D
Sbjct: 170 IAADADPETIDAFGEYAERVGIAFQIRDDVLDATAD 205


>gi|320036615|gb|EFW18554.1| hexaprenyl pyrophosphate synthetase [Coccidioides posadasii str.
           Silveira]
          Length = 472

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 14/171 (8%)

Query: 66  NVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +VN L + R  A I E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL
Sbjct: 205 DVNILPSQRRLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLL 262

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMI 180
             A   ++    +L+D   ++L+ ++  N+ ++G         QDE    + ++   + +
Sbjct: 263 GRASVALA----RLRDPEVTELLATVIANL-VEGEFMQLKNTAQDERNPAWTEDIIAYYL 317

Query: 181 QK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           QK  +K+ +L+  +C + A++   +    E    +G NLG+ FQL DD+LD
Sbjct: 318 QKTYLKSASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLD 368


>gi|319949942|ref|ZP_08023938.1| polyprenyl synthetase [Dietzia cinnamea P4]
 gi|319436392|gb|EFV91516.1| polyprenyl synthetase [Dietzia cinnamea P4]
          Length = 344

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 15/186 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  +      +    +H   ++     E IH  +L HDD+  MD   +RRG  + 
Sbjct: 61  GGKRFRPIVTLLAGEIGPEPDHERLVKAAVVCEMIHLATLYHDDV--MDEASMRRGVESA 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           + ++D  TAI+AG+ L  ++  +++       QL     ++L+          G+ G   
Sbjct: 119 NSRWDNSTAILAGDFLFAHSSMLLADLGPAAVQLIAQTFAELVTGQMRETVGPGVGG--- 175

Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
              +DE  D  Q ++ +   KTG+L+  A + G   + A+  +  RLR FG+ +GI FQ+
Sbjct: 176 ---RDE--DAAQHYLRVIWEKTGSLIAAAAQFGGEYSGATGEQIARLRRFGDAVGIAFQI 230

Query: 224 ADDLLD 229
           ADD++D
Sbjct: 231 ADDIID 236


>gi|256545799|ref|ZP_05473155.1| heptaprenyl diphosphate synthase component II [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398495|gb|EEU12116.1| heptaprenyl diphosphate synthase component II [Anaerococcus
           vaginalis ATCC 51170]
          Length = 333

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 120/237 (50%), Gaps = 19/237 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIR 54
           MN  +   L + SK+  TI+D L+ +T   M+      + + +L + I   L+  GK IR
Sbjct: 1   MNFAISECLAKESKQ--TIIDYLIDKTLVEMREILGDYKQSQKLYNIIENTLISSGKMIR 58

Query: 55  SFLVTECASLFNVNHLTALRVG--AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           + L+    SL   N ++   +   AA+E  H  SLIHDD+  +D+  IRR   ++  +Y 
Sbjct: 59  TKLLI-YISLMGENQISDKIISQCAAVEITHLASLIHDDI--IDDSLIRRSHRSIQSKYG 115

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           +  A+ AG+ +++  F  ++  K  L + I    ++S T      G +G  ++  + + I
Sbjct: 116 KDVAVFAGDYMISKVFSYLA--KKGLVEEIS---IISDTIRDMCNGEVGQNLIKYRLD-I 169

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            E + F     KT +     C  GA  A  +Q +  ++  FG+NLG++FQL DD+LD
Sbjct: 170 SEKEYFENICGKTASFFKTVCYFGAKNAGFNQIDINKMVEFGKNLGLMFQLKDDILD 226


>gi|220936362|ref|YP_002515261.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997672|gb|ACL74274.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 322

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A          + + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLSARACGAGDRRHIDLAAIIEFIHTATLLHDDV--VDASELRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     +R   +L+ T N   +G +  Q+L+  
Sbjct: 101 ALFGNEASVLVGDFLYSRSFEMMVEIGS-----MRVMEILAHTTNTIAEGEVL-QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   + + KT  L   A   GA++    ++ ++ +  +G +LG  FQL DD+L
Sbjct: 155 DADTPEERYMEVIQSKTAKLFEAAARIGAVLGGQPESVEQAMAAYGMHLGTAFQLIDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|237716862|ref|ZP_04547343.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1]
 gi|262405631|ref|ZP_06082181.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
           sp. 2_1_22]
 gi|294644424|ref|ZP_06722187.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
 gi|294810418|ref|ZP_06769075.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
 gi|298484258|ref|ZP_07002422.1| polyprenyl synthetase [Bacteroides sp. D22]
 gi|229442845|gb|EEO48636.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1]
 gi|262356506|gb|EEZ05596.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
           sp. 2_1_22]
 gi|292640259|gb|EFF58514.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
 gi|294442383|gb|EFG11193.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
 gi|295085933|emb|CBK67456.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens
           XB1A]
 gi|298269583|gb|EFI11180.1| polyprenyl synthetase [Bacteroides sp. D22]
          Length = 324

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+     + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVARLYGAVCPSTLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++ G+ LL  A  ++ +  T       S  ++ L   +G Q +  G++L   +
Sbjct: 103 IFNNKVAVLTGDYLL--ATSLVHAELTN------SHRIIQLVSTLG-QDLADGELLQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    E   F + + KT AL     ++ A      + E E  R  GE +GI FQ+ DD
Sbjct: 154 VSNHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDD 213

Query: 227 LLD 229
           + D
Sbjct: 214 IFD 216


>gi|229547329|ref|ZP_04436054.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX1322]
 gi|255970563|ref|ZP_05421149.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1]
 gi|256958518|ref|ZP_05562689.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5]
 gi|256963076|ref|ZP_05567247.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704]
 gi|257088406|ref|ZP_05582767.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6]
 gi|257420312|ref|ZP_05597302.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98]
 gi|294780744|ref|ZP_06746104.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
 gi|312953761|ref|ZP_07772592.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
 gi|229307568|gb|EEN73555.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX1322]
 gi|255961581|gb|EET94057.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1]
 gi|256949014|gb|EEU65646.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5]
 gi|256953572|gb|EEU70204.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704]
 gi|256996436|gb|EEU83738.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6]
 gi|257162136|gb|EEU92096.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98]
 gi|294452184|gb|EFG20626.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
 gi|310628321|gb|EFQ11604.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
 gi|315033018|gb|EFT44950.1| polyprenyl synthetase [Enterococcus faecalis TX0017]
 gi|315035236|gb|EFT47168.1| polyprenyl synthetase [Enterococcus faecalis TX0027]
 gi|315152723|gb|EFT96739.1| polyprenyl synthetase [Enterococcus faecalis TX0031]
 gi|315171248|gb|EFU15265.1| polyprenyl synthetase [Enterococcus faecalis TX1342]
 gi|323479172|gb|ADX78611.1| polyprenyl synthetase family protein [Enterococcus faecalis 62]
 gi|327536366|gb|AEA95200.1| trans-hexaprenyltranstransferase [Enterococcus faecalis OG1RF]
          Length = 328

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 70  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220


>gi|229525127|ref|ZP_04414532.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae bv. albensis VL426]
 gi|229338708|gb|EEO03725.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae bv. albensis VL426]
 gi|327483290|gb|AEA77697.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4]
          Length = 323

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 22  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 79  ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 131

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|297580574|ref|ZP_06942500.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385]
 gi|297534990|gb|EFH73825.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385]
          Length = 348

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 47  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 103

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 104 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 156

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 157 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 215

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 216 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 244


>gi|296140358|ref|YP_003647601.1| polyprenyl synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296028492|gb|ADG79262.1| Polyprenyl synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 362

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 41/215 (19%)

Query: 44  RYALLGGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           R+ L GGK+IR       +L    A+  +V    ALR  +A+E +   +LIHDD+  +D 
Sbjct: 50  RFVLRGGKRIRPAFAWTGWLAGGGATDGDVAR-AALRACSALEFVQACALIHDDI--IDA 106

Query: 98  GYIRRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIIS----SPKTQ 137
              RRG PT H ++                 E TAI+ G+  L +A ++      SP+  
Sbjct: 107 SQTRRGYPTTHREFAELHAQRGWSGSSEKFGEATAILLGDLALAWADDMFLGAGLSPERY 166

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM--IQKMKT-GALMCFAC 193
           L+       M +         +LGGQ+LDI  E   DE+Q     + + KT G  +    
Sbjct: 167 LRAARAWAAMRTE--------VLGGQLLDIVSEASRDESQAAAERVVRFKTAGYTVERPL 218

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             GA +A AS      LR  G +LG+ FQL DDLL
Sbjct: 219 HVGAALAGASDQAITALRAIGVDLGVAFQLRDDLL 253


>gi|163749221|ref|ZP_02156471.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99]
 gi|161331291|gb|EDQ02180.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99]
          Length = 323

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +   +  L++ A +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLSILAARAIDYQGVAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L  +++   ML+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELG-SMKVLKMLADATNVLAEGEV-LQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTSEESYMRVIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|119192214|ref|XP_001246713.1| hypothetical protein CIMG_00484 [Coccidioides immitis RS]
          Length = 472

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 14/171 (8%)

Query: 66  NVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +VN L + R  A I E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL
Sbjct: 205 DVNILPSQRRLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLL 262

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMI 180
             A   ++    +L+D   ++L+ ++  N+ ++G         QDE    + ++   + +
Sbjct: 263 GRASVALA----RLRDPEVTELLATVIANL-VEGEFMQLKNTAQDERNPAWTEDIIAYYL 317

Query: 181 QK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           QK  +K+ +L+  +C + A++   +    E    +G NLG+ FQL DD+LD
Sbjct: 318 QKTYLKSASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLD 368


>gi|114048617|ref|YP_739167.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-7]
 gi|113890059|gb|ABI44110.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-7]
          Length = 331

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L D++R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQETALGDYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|262172465|ref|ZP_06040143.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus MB-451]
 gi|261893541|gb|EEY39527.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus MB-451]
          Length = 323

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 22  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 79  ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 131

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|224499314|ref|ZP_03667663.1| polyprenyl synthetase [Listeria monocytogenes Finland 1988]
          Length = 326

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|34762284|ref|ZP_00143289.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase;
           Farnesyltransferase; Heptaprenyl diphosphate synthase
           component II [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|256846036|ref|ZP_05551494.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2]
 gi|27888070|gb|EAA25132.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase;
           Farnesyltransferase; Heptaprenyl diphosphate synthase
           component II [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|256719595|gb|EEU33150.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 326

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L GK +RS L+  CA L   +  N     ++ A +E  H  SLIHDD+  +D+   RRGK
Sbjct: 40  LSGKMLRSKLLLLCAFLGSNWKDNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++  +Y +  A+ AG+ L+   F         L + +    +LS T      G +   +
Sbjct: 98  VSIQGKYGKDAAVFAGDFLIARIF--YYGAMENLNETVS---ILSKTVEYMCIGEIEQDL 152

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              Q++ I E + F   + KT AL   A   GA     S+   ++L+ F +NLG++FQL 
Sbjct: 153 CRYQED-ISEKKYFENIERKTAALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLK 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|29377703|ref|NP_816857.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecalis V583]
 gi|256854910|ref|ZP_05560274.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8]
 gi|257080330|ref|ZP_05574691.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol]
 gi|257091474|ref|ZP_05585835.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188]
 gi|307274532|ref|ZP_07555713.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
 gi|29345171|gb|AAO82927.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecalis V583]
 gi|256710470|gb|EEU25514.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8]
 gi|256988360|gb|EEU75662.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol]
 gi|257000286|gb|EEU86806.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188]
 gi|306508804|gb|EFM77893.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
 gi|315580811|gb|EFU93002.1| polyprenyl synthetase [Enterococcus faecalis TX0309A]
          Length = 328

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 70  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220


>gi|229507073|ref|ZP_04396579.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae BX 330286]
 gi|229508772|ref|ZP_04398264.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae B33]
 gi|229519759|ref|ZP_04409202.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC9]
 gi|229519996|ref|ZP_04409425.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TM 11079-80]
 gi|229530278|ref|ZP_04419666.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae 12129(1)]
 gi|229606271|ref|YP_002876919.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae MJ-1236]
 gi|255743817|ref|ZP_05417774.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholera CIRS 101]
 gi|262167602|ref|ZP_06035306.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC27]
 gi|229332051|gb|EEN97539.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae 12129(1)]
 gi|229342945|gb|EEO07934.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TM 11079-80]
 gi|229344448|gb|EEO09423.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC9]
 gi|229354175|gb|EEO19106.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae B33]
 gi|229355818|gb|EEO20738.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae BX 330286]
 gi|229368926|gb|ACQ59349.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae MJ-1236]
 gi|255738566|gb|EET93954.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholera CIRS 101]
 gi|262023938|gb|EEY42635.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC27]
          Length = 323

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 22  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 78

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 79  ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 131

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 132 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 190

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 191 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|217966160|ref|YP_002351838.1| polyprenyl synthetase [Listeria monocytogenes HCC23]
 gi|217335430|gb|ACK41224.1| polyprenyl synthetase [Listeria monocytogenes HCC23]
 gi|307572230|emb|CAR85409.1| polyprenyl synthase, component II [Listeria monocytogenes L99]
          Length = 326

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|258627044|ref|ZP_05721842.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603]
 gi|258580718|gb|EEW05669.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603]
          Length = 348

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 10/206 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q   +  L++ + + ++  GGK++R  L    A     +        A IE IH  +L
Sbjct: 47  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYHGSHHTTAAAFIEFIHTATL 106

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   +
Sbjct: 107 LHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKL 159

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS   +
Sbjct: 160 MSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVE 218

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             ++ +G+ LG  FQL DD++D   D
Sbjct: 219 LAMQNYGKYLGTAFQLIDDVMDYTSD 244


>gi|290891826|ref|ZP_06554823.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071]
 gi|290558420|gb|EFD91937.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071]
          Length = 326

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|219871055|ref|YP_002475430.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165]
 gi|219691259|gb|ACL32482.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165]
          Length = 327

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++S  +     +    ++S   N+  +G +  Q++++ 
Sbjct: 105 ARFGNAASVLVGDFIYTRAFQMMASLCS-----LDVLQVMSDATNVIAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A +  AI++ A Q     +R +G  LG  FQL DD+L
Sbjct: 159 NPETTEANYMQVIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|323493611|ref|ZP_08098732.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546]
 gi|323312134|gb|EGA65277.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546]
          Length = 323

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 10/206 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q   +  L++ + + ++  GGK+IR  L    A              A IE IH  +L
Sbjct: 22  HAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQGEAHTTAAAFIEFIHTATL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   +
Sbjct: 82  LHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SLKILKL 134

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  A    +
Sbjct: 135 MSDAVNVIAEGEVQ-QLMNCNDPDTTEESYMQVIYSKTARLFEAATQIGAILNEAPAEVE 193

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L+ +G+ LG  FQL DD++D   D
Sbjct: 194 LALQNYGKYLGTAFQLIDDVMDYTSD 219


>gi|289641413|ref|ZP_06473577.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca
           glomerata]
 gi|289508749|gb|EFD29684.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca
           glomerata]
          Length = 333

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 19/190 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V   A   +   +  L    AIE  H  +L HDD+  MD   +RRG  + +
Sbjct: 54  GGKRFRPMVVLLAAHFGDPEAIGVLPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASAN 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           +++    AI+ G+ L   A +I +   P+    L   I +     +   +G    L GQ 
Sbjct: 112 VRWTNTIAILTGDFLFARASDITADLGPEATRILARTIATLCEGQIRETVG---SLPGQ- 167

Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                   D  + ++ + + KT +L+  +   GA++A A     + L  FG+  G+ FQL
Sbjct: 168 --------DPVEHYLRVIREKTASLIATSGRLGAMLAGADLITVDALAAFGDYFGVAFQL 219

Query: 224 ADDLLDCEED 233
           +DDL+D   D
Sbjct: 220 SDDLIDVASD 229


>gi|303313007|ref|XP_003066515.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240106177|gb|EER24370.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 472

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 14/171 (8%)

Query: 66  NVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +VN L + R  A I E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL
Sbjct: 205 DVNILPSQRRLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLL 262

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMI 180
             A   ++    +L+D   ++L+ ++  N+ ++G         QDE    + ++   + +
Sbjct: 263 GRASVALA----RLRDPEVTELLATVIANL-VEGEFMQLKNTAQDERNPAWTEDIIAYYL 317

Query: 181 QK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           QK  +K+ +L+  +C + A++   +    E    +G NLG+ FQL DD+LD
Sbjct: 318 QKTYLKSASLISKSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLD 368


>gi|183985063|ref|YP_001853354.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1
           [Mycobacterium marinum M]
 gi|183178389|gb|ACC43499.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1
           [Mycobacterium marinum M]
          Length = 346

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 25/218 (11%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           ID +  +L L    H+     D   S++R+    GK +R  L   CA         A+  
Sbjct: 38  IDNLSPELRLCAGFHIGWWEPDGRDSSVRH----GKAVRPALSITCARAAGGAMDAAIPA 93

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E +H  SL+HDD+  MD    RR +P   + Y    AI+ G+ LL  A +++    
Sbjct: 94  AVAVELVHDCSLLHDDI--MDGDVTRRHRPAAWVVYGVPMAILTGDALLVLALDLVHEGA 151

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMC 190
           +            S      L+ +  GQ  D+   F   T+V++     + + KTGAL  
Sbjct: 152 SG-----------SALRKAALE-LCAGQSADLA--FEQRTKVWLPECLQMAQQKTGALFG 197

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AC+ GA+ A A     ++   FG +LG+ FQL DD+L
Sbjct: 198 VACQLGALAAGADSLVADQYAQFGRHLGLSFQLVDDIL 235


>gi|197120826|ref|YP_002132777.1| polyprenyl synthetase [Anaeromyxobacter sp. K]
 gi|196170675|gb|ACG71648.1| Polyprenyl synthetase [Anaeromyxobacter sp. K]
          Length = 349

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 20  LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           L + LL+  + +     D   +L +A R+ +  GGK+IR  +              A+  
Sbjct: 35  LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A E  H  +L+HDD+  +D+G +RRG+P   + +    ++++G+ LLT A EI+S+  
Sbjct: 95  AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSA-- 150

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKM-KTGALMCFA 192
               +  RS  +  L     ++ ++ G++  L ++  F    Q +M   M KT +L  +A
Sbjct: 151 ----EPARSAALPPLLAT--MRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWA 204

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +GA  A         L  FGE +G+ FQL DD LD   D
Sbjct: 205 AAAGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAAD 245


>gi|117921658|ref|YP_870850.1| polyprenyl synthetase [Shewanella sp. ANA-3]
 gi|117613990|gb|ABK49444.1| Polyprenyl synthetase [Shewanella sp. ANA-3]
          Length = 331

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L D++R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQEAALGDYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|15640461|ref|NP_230088.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121590773|ref|ZP_01678102.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80]
 gi|121727265|ref|ZP_01680424.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52]
 gi|147674613|ref|YP_001218702.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
 gi|153819559|ref|ZP_01972226.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457]
 gi|153822596|ref|ZP_01975263.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33]
 gi|153830825|ref|ZP_01983492.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39]
 gi|227080645|ref|YP_002809196.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2]
 gi|254850665|ref|ZP_05240015.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10]
 gi|298501034|ref|ZP_07010835.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757]
 gi|9654858|gb|AAF93607.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547375|gb|EAX57489.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80]
 gi|121630384|gb|EAX62779.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52]
 gi|126509895|gb|EAZ72489.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457]
 gi|126519900|gb|EAZ77123.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33]
 gi|146316496|gb|ABQ21035.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
 gi|148873684|gb|EDL71819.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39]
 gi|227008533|gb|ACP04745.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2]
 gi|227012288|gb|ACP08498.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
 gi|254846370|gb|EET24784.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10]
 gi|297540282|gb|EFH76342.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757]
          Length = 348

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 47  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 103

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 104 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 156

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 157 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 215

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 216 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 244


>gi|47097124|ref|ZP_00234692.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254830926|ref|ZP_05235581.1| hypothetical protein Lmon1_06179 [Listeria monocytogenes 10403S]
 gi|254899908|ref|ZP_05259832.1| hypothetical protein LmonJ_08841 [Listeria monocytogenes J0161]
 gi|254912886|ref|ZP_05262898.1| polyprenyl synthetase [Listeria monocytogenes J2818]
 gi|254937267|ref|ZP_05268964.1| polyprenyl synthetase [Listeria monocytogenes F6900]
 gi|47014491|gb|EAL05456.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609873|gb|EEW22481.1| polyprenyl synthetase [Listeria monocytogenes F6900]
 gi|293590886|gb|EFF99220.1| polyprenyl synthetase [Listeria monocytogenes J2818]
          Length = 326

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|295114543|emb|CBL33180.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76]
          Length = 323

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 65  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 122

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 123 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 171

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 172 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 215


>gi|194364794|ref|YP_002027404.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194347598|gb|ACF50721.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 332

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV               ++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPMLVMLAGRAVGNVGPEHHQLAAIIEFIHTSTLLHDDV--VDESSLRRGRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++     +L+     Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----VELERMSVMQILADATNRIAEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L       GA+ +   +  ++ L  +G +LG  FQ+ADD+L
Sbjct: 165 NPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|315181275|gb|ADT88189.1| octaprenyl-diphosphate synthase [Vibrio furnissii NCTC 11218]
          Length = 396

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69
           K I T+  + + +    +Q Q N    L++ + + ++  GGK++R  L    A       
Sbjct: 77  KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLAVLSAKALGYQG 136

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                  A IE  H  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+
Sbjct: 137 QGHTLAAAFIEFTHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDYIYTRSFQ 194

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++     +L      QLM S   N+  +G +  Q+++  D    E     +   KT  L 
Sbjct: 195 MM----VELGSMKILQLM-SEAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLF 248

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + GAI+A AS   +  L+ +G+ LG  FQL DD++D   D
Sbjct: 249 EAATQIGAILADASPEIETALQNYGKYLGTAFQLIDDVMDYTAD 292


>gi|261378364|ref|ZP_05982937.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685]
 gi|269145472|gb|EEZ71890.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685]
          Length = 324

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          ++     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGRSVGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AF+++    +     +R   +++   NI  +G +  Q+++I 
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E +   + + KT  L   A + G+I+ +A    ++ L+ +G  +G  FQ+ DD+L
Sbjct: 157 NTDITEEEYIQVIQYKTAKLFEAAAQVGSILGNAPPECEQALKDYGMYVGTAFQIIDDVL 216

Query: 229 D 229
           D
Sbjct: 217 D 217


>gi|254225991|ref|ZP_04919591.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51]
 gi|254291338|ref|ZP_04962132.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226]
 gi|125621447|gb|EAZ49781.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51]
 gi|150422794|gb|EDN14747.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226]
          Length = 348

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
           H Q   +  L++ + + ++  GGK++R  L    A        +H TA    A IE IH 
Sbjct: 47  HAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHT 103

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++ 
Sbjct: 104 ATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKI 156

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS 
Sbjct: 157 LKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASP 215

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  ++ +G+ LG  FQL DD++D   D
Sbjct: 216 EVELAMQNYGKYLGTAFQLIDDVMDYTSD 244


>gi|86156806|ref|YP_463591.1| farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773317|gb|ABC80154.1| Farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 349

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 20  LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           L + LL+  + +     D   +L +A R+ +  GGK+IR  +              A+  
Sbjct: 35  LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A E  H  +L+HDD+  +D+G +RRG+P   + +    ++++G+ LLT A EI+S+  
Sbjct: 95  AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSA-- 150

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQKM-KTGALMCFA 192
               +  RS  +  L     ++ ++ G++  L ++  F    Q +M   M KT +L  +A
Sbjct: 151 ----EPARSAALPPLLAT--MRRLVEGEVLQLSLRGGFSATEQAYMDVVMGKTASLFGWA 204

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +GA  A         L  FGE +G+ FQL DD LD   D
Sbjct: 205 AAAGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAAD 245


>gi|71066129|ref|YP_264856.1| octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4]
 gi|71039114|gb|AAZ19422.1| probable octaprenyl-diphosphate synthase [Psychrobacter arcticus
           273-4]
          Length = 349

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +   CA +FN      A+ + A  E +H  +L+HDD+  +D    RRGK T 
Sbjct: 67  GGKRMRPLITLLCARMFNDEPSQQAMHLAAITEMLHTATLVHDDV--IDESGQRRGKATA 124

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +D  TA++ G+ L+  AF ++   ++         L L    + G   +  G++L +
Sbjct: 125 NATWDNATAVLVGDYLIARAFNLLVGFQS---------LPLLQVFSDGTCDIAEGEVLQL 175

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q +      E     I   KT  L   A +  AI+    Q+  + L  FG++ G  FQ+ 
Sbjct: 176 QHQHNPEATEQDYLNIIDGKTSRLFMMATQGAAILQGQIQH-LQALADFGQHFGNAFQII 234

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 235 DDVLDYSGD 243


>gi|291514908|emb|CBK64118.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301]
          Length = 329

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 26/209 (12%)

Query: 33  TQHNDRLLSAIRYALLG-GKKIRSFLVTECASL-FNVNHLTALR----VGAAIECIHCYS 86
           T   + L   +RYAL   GK IR  LV   A++   V    A R        +E IH  S
Sbjct: 27  TAEGELLSDMLRYALSARGKGIRPMLVMLSAAMNAPVKGAAAGRRACLAAMLVEMIHVAS 86

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDD+  +D   +RRGKP+ + ++    A+I G+ +L     I           ++S  
Sbjct: 87  LIHDDV--IDEADMRRGKPSANARWQSHKAVILGDYILAKNMNI----------GLQSGQ 134

Query: 147 MLSLTHNIG-LQGMLGGQMLDIQDEFIDET----QVFM-IQKMKTGALMCFACESGAIMA 200
              +TH  G +  +  G++L  QDE    +    Q ++ I   KT +L+  +  +GA+  
Sbjct: 135 FDLVTHVCGSMAALCEGEVL--QDECAANSTMTRQAYLDIIYKKTASLLGVSASAGALAV 192

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
            A+++    +R FGE +G+ FQ+ DD+LD
Sbjct: 193 GATRDRVATMRRFGEAVGMAFQIQDDILD 221


>gi|163802656|ref|ZP_02196547.1| malate dehydrogenase [Vibrio sp. AND4]
 gi|159173544|gb|EDP58364.1| malate dehydrogenase [Vibrio sp. AND4]
          Length = 323

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYHGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +I+   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SIKILKLMSDAVNVIAEGEVQ-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GAI+  A +N +  L+ +G+ LG  FQL DD++
Sbjct: 155 NPDTTEENYMQVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKFLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|16804679|ref|NP_466164.1| hypothetical protein lmo2641 [Listeria monocytogenes EGD-e]
 gi|224503563|ref|ZP_03671870.1| hypothetical protein LmonFR_13848 [Listeria monocytogenes FSL
           R2-561]
 gi|254829090|ref|ZP_05233777.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165]
 gi|255025739|ref|ZP_05297725.1| hypothetical protein LmonocytFSL_04305 [Listeria monocytogenes FSL
           J2-003]
 gi|284800473|ref|YP_003412338.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578]
 gi|284993659|ref|YP_003415427.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923]
 gi|16412129|emb|CAD00719.1| lmo2641 [Listeria monocytogenes EGD-e]
 gi|258601501|gb|EEW14826.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165]
 gi|284056035|gb|ADB66976.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578]
 gi|284059126|gb|ADB70065.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923]
          Length = 326

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +   +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ 
Sbjct: 156 RTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQII 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|251793088|ref|YP_003007814.1| octaprenyl-diphosphate synthase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534481|gb|ACS97727.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase)
           [Aggregatibacter aphrophilus NJ8700]
          Length = 323

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         A+     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARALGFEGPQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL+     ++M   T N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVA----QLESLKILRIMADAT-NVLAEGEVQ-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A +++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGSNEAQEQALQSYGRYLGTAFQLVDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|213964989|ref|ZP_03393188.1| bifunctional short chain isoprenyl diphosphate synthase
           [Corynebacterium amycolatum SK46]
 gi|213952525|gb|EEB63908.1| bifunctional short chain isoprenyl diphosphate synthase
           [Corynebacterium amycolatum SK46]
          Length = 351

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 22/192 (11%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRG 103
           A  GGK+ R  + T  A+ F     +   + AA  +E  H  +L HDD+  MD    RRG
Sbjct: 66  AQAGGKRFRP-MFTMLAAQFGETPESDKVITAATVLELTHLATLYHDDV--MDEADKRRG 122

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            P+ + ++D   AI+AG+    Y F + S    +L   + S+ +       G+  ++ GQ
Sbjct: 123 VPSANSRWDNTVAILAGD----YLFAVAS----RLLAELGSESVAHFAETFGV--LVTGQ 172

Query: 164 M------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           M      LD+  E   E  + +I + KTG L+  A   GA  A AS +    LR +GE +
Sbjct: 173 MRECLNDLDLPIEERIERYLKVIAE-KTGVLIASAGYLGAYHAGASADISNALRRYGELI 231

Query: 218 GIIFQLADDLLD 229
           GI+FQ+ DD++D
Sbjct: 232 GIVFQIVDDIID 243


>gi|88803606|ref|ZP_01119131.1| polyprenyl synthetase [Polaribacter irgensii 23-P]
 gi|88780618|gb|EAR11798.1| polyprenyl synthetase [Polaribacter irgensii 23-P]
          Length = 325

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 38/208 (18%)

Query: 39  LLSAIRYALL--GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           LL+ I Y ++   GK++R    FLV +  S    +  T  R  A +E IH  +L+HDD+ 
Sbjct: 32  LLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERT-YRGAAVVELIHTATLVHDDI- 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D+  +RR   +V+  +    A++ G+ LL+                    L+LS+ +N
Sbjct: 90  -VDDSNMRRSFFSVNALWKNKIAVLVGDFLLSKG------------------LLLSIDNN 130

Query: 154 ---------IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAH 201
                    I ++ M  G++L I+      I E   F I + KT  L+   C  GA    
Sbjct: 131 DFDLLKLISIAVREMSEGELLQIEKARKLDITEAIYFDIIRKKTATLIAACCGIGAASVG 190

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           A+Q+   ++R FGE +GI FQ+ DDL D
Sbjct: 191 ANQDCIRKMRKFGEYIGIAFQIKDDLFD 218


>gi|113969238|ref|YP_733031.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-4]
 gi|113883922|gb|ABI37974.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-4]
          Length = 331

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L D++R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMM----TEL-DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQETALGDYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|171679677|ref|XP_001904785.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939464|emb|CAP64692.1| unnamed protein product [Podospora anserina S mat+]
          Length = 454

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 24/176 (13%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 196 RLAEITELIHTASLLHDDV--IDHSESRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 252

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFIDETQVFMIQK--M 183
                   +R   ++ L   + +  ++ G+ + +++        ++ +ET  + +QK  +
Sbjct: 253 -------RLRHAEVIELLATV-IANLVEGEFMQLKNTARDERNPQWSEETLTYYLQKTYL 304

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           KT +L+  +C + A++  +     +    +G+NLG+ FQL DD+LD    E++L K
Sbjct: 305 KTASLISKSCRAAALLGGSDAATVDAAYAYGKNLGLAFQLVDDMLDYTRSEQELGK 360


>gi|225631093|ref|ZP_03787822.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591208|gb|EEH12361.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 264

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + V A++E IH  +L+HDD+  +D    R G  T +  +   ++I+ G+ LLT AF  + 
Sbjct: 10  INVAASVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLI 67

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                   N+    +LS   ++ ++G +  QM    D        F I   KT +L    
Sbjct: 68  EC-----GNLNILSILSKASHLLVKGEIK-QMKARFDPHTVRENYFDIIGEKTASLFSAC 121

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           CE+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+LD
Sbjct: 122 CEAASTVSGATNDETERLKNFGFNFGMAFQIVDDMLD 158


>gi|153217175|ref|ZP_01950939.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587]
 gi|124113799|gb|EAY32619.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587]
          Length = 282

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 2   GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 59

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   N+  +G +  Q+++  
Sbjct: 60  AAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKLMSDAVNVIAEGEVQ-QLMNCN 113

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 114 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 173

Query: 229 DCEED 233
           D   D
Sbjct: 174 DYTSD 178


>gi|229552897|ref|ZP_04441622.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258509306|ref|YP_003172057.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
 gi|258540493|ref|YP_003174992.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc
           705]
 gi|229313766|gb|EEN79739.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257149233|emb|CAR88206.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
 gi|257152169|emb|CAR91141.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc
           705]
 gi|259650587|dbj|BAI42749.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
          Length = 325

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 19/191 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R       +   + +    + + AAIE +H  +LIHDD+  +D    RR + T+ 
Sbjct: 46  GGKLLRPAYCLLFSRFQDTDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            Q+   TA+ AG+ L    F++++   + L+         S+  + G ++ +L G++  +
Sbjct: 104 KQFGPDTAVYAGDYLFVVCFKLLAHYASSLR---------SIQQDSGSMEKILKGELDQM 154

Query: 168 QDEFIDETQVFMIQKMK-----TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              +  +TQ+ +   +K     TG L   +C  GA  +  + N  +     G N+GI FQ
Sbjct: 155 ATRY--QTQITINDYLKQVSGKTGQLFALSCFVGAYESGGTTNFAKTAEKIGMNIGIAFQ 212

Query: 223 LADDLLDCEED 233
           L DD+LD   D
Sbjct: 213 LLDDILDYTSD 223


>gi|69248976|ref|ZP_00604834.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO]
 gi|257880389|ref|ZP_05660042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933]
 gi|257882385|ref|ZP_05662038.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502]
 gi|257886155|ref|ZP_05665808.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501]
 gi|257891717|ref|ZP_05671370.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410]
 gi|257894056|ref|ZP_05673709.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408]
 gi|258614163|ref|ZP_05711933.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecium DO]
 gi|260559354|ref|ZP_05831535.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68]
 gi|261209112|ref|ZP_05923515.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6]
 gi|289567338|ref|ZP_06447712.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF]
 gi|293563994|ref|ZP_06678400.1| polyprenyl synthetase [Enterococcus faecium E1162]
 gi|293568569|ref|ZP_06679887.1| polyprenyl synthetase [Enterococcus faecium E1071]
 gi|294615036|ref|ZP_06694924.1| polyprenyl synthetase [Enterococcus faecium E1636]
 gi|294618420|ref|ZP_06697994.1| polyprenyl synthetase [Enterococcus faecium E1679]
 gi|294622823|ref|ZP_06701775.1| polyprenyl synthetase [Enterococcus faecium U0317]
 gi|314940477|ref|ZP_07847623.1| polyprenyl synthetase [Enterococcus faecium TX0133a04]
 gi|314942588|ref|ZP_07849421.1| polyprenyl synthetase [Enterococcus faecium TX0133C]
 gi|314949713|ref|ZP_07853027.1| polyprenyl synthetase [Enterococcus faecium TX0082]
 gi|314953265|ref|ZP_07856201.1| polyprenyl synthetase [Enterococcus faecium TX0133A]
 gi|314992667|ref|ZP_07858080.1| polyprenyl synthetase [Enterococcus faecium TX0133B]
 gi|314998247|ref|ZP_07863119.1| polyprenyl synthetase [Enterococcus faecium TX0133a01]
 gi|68194317|gb|EAN08831.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO]
 gi|257814617|gb|EEV43375.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933]
 gi|257818043|gb|EEV45371.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502]
 gi|257822011|gb|EEV49141.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501]
 gi|257828077|gb|EEV54703.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410]
 gi|257830435|gb|EEV57042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408]
 gi|260074453|gb|EEW62774.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68]
 gi|260076939|gb|EEW64663.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6]
 gi|289160861|gb|EFD08787.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF]
 gi|291588711|gb|EFF20541.1| polyprenyl synthetase [Enterococcus faecium E1071]
 gi|291592098|gb|EFF23719.1| polyprenyl synthetase [Enterococcus faecium E1636]
 gi|291595317|gb|EFF26636.1| polyprenyl synthetase [Enterococcus faecium E1679]
 gi|291597719|gb|EFF28859.1| polyprenyl synthetase [Enterococcus faecium U0317]
 gi|291603912|gb|EFF33440.1| polyprenyl synthetase [Enterococcus faecium E1162]
 gi|313587756|gb|EFR66601.1| polyprenyl synthetase [Enterococcus faecium TX0133a01]
 gi|313592801|gb|EFR71646.1| polyprenyl synthetase [Enterococcus faecium TX0133B]
 gi|313594692|gb|EFR73537.1| polyprenyl synthetase [Enterococcus faecium TX0133A]
 gi|313598660|gb|EFR77505.1| polyprenyl synthetase [Enterococcus faecium TX0133C]
 gi|313640334|gb|EFS04915.1| polyprenyl synthetase [Enterococcus faecium TX0133a04]
 gi|313643926|gb|EFS08506.1| polyprenyl synthetase [Enterococcus faecium TX0082]
          Length = 328

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+ + A+IE +H  +LIHDD+  +D   +RRG+P +  Q+  V ++ AG+ L    F+++
Sbjct: 70  AIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   T LK    N RS           ++ +L G++  + D +  E  V    +    KT
Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD
Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220


>gi|329572077|gb|EGG53747.1| polyprenyl synthetase [Enterococcus faecalis TX1467]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|313158272|gb|EFR57674.1| polyprenyl synthetase [Alistipes sp. HGB5]
          Length = 373

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 24/208 (11%)

Query: 33  TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN---------HLTALRVGAAIECI 82
           T   + L   +RYAL   GK IR  LV   A++ +           HL A+ V    E I
Sbjct: 71  TAEGELLSDMLRYALSSRGKGIRPLLVLLSAAMNSPVAEAAKGRRVHLAAMLV----EMI 126

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDN 141
           H  SLIHDD+  +D   +RRGKP+ + ++    A+I G+ +L     I ++S +  L  +
Sbjct: 127 HVASLIHDDV--IDEADMRRGKPSANARWQSHKAVILGDYILARNLSIGLTSGQFDLVTH 184

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +    M +L     LQ     +    +  ++D     +I K KT  L+  +  +GA+   
Sbjct: 185 VCGS-MAALCEGEVLQSECAEKHTMTRQAYLD-----IIYK-KTACLIGVSASAGAMAVG 237

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
           ASQ +   +R FGE +G+ FQ+ DD+LD
Sbjct: 238 ASQQKVALMRRFGEAVGMAFQIQDDILD 265


>gi|326798537|ref|YP_004316356.1| trans-hexaprenyltranstransferase [Sphingobacterium sp. 21]
 gi|326549301|gb|ADZ77686.1| Trans-hexaprenyltranstransferase [Sphingobacterium sp. 21]
          Length = 323

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 18/221 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLF 65
           KL+E  K I T LDD  ++    M++  +  LL  I + ++   GK++R   V   A   
Sbjct: 3   KLEEIKKPIATELDDFEIKFKESMRS--SVPLLDRITHYIVKRKGKQMRPMFVFFAAGAC 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
              + +  R  A +E +H  +L+HDD+  +DN Y RRG  +V+  +    A++ G+ LL+
Sbjct: 61  GGINESTHRGAALVELVHTATLVHDDV--VDNSYQRRGFFSVNALWKNKIAVLVGDFLLS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182
               +  S K Q  + +R         N  +  M  G++L ++      IDE   F + +
Sbjct: 119 KGLSL--SVKNQDFEFLR-------ILNEAVTEMSEGELLQMEKARRLDIDEGVYFEVIR 169

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            KT +L+   C  GA   +A      ++  FGE +GI FQ+
Sbjct: 170 QKTASLIASCCACGAASTNAPSELVTKMHDFGEKVGIAFQI 210


>gi|315172839|gb|EFU16856.1| polyprenyl synthetase [Enterococcus faecalis TX1346]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|315028641|gb|EFT40573.1| polyprenyl synthetase [Enterococcus faecalis TX4000]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|255659210|ref|ZP_05404619.1| heptaprenyl diphosphate synthase component II [Mitsuokella
           multacida DSM 20544]
 gi|260848662|gb|EEX68669.1| heptaprenyl diphosphate synthase component II [Mitsuokella
           multacida DSM 20544]
          Length = 319

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 24/197 (12%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L       F++ H+  L +  A+E IH  SL+HDD+  +D    RRG  
Sbjct: 38  GGKRIRPALCLLSARGGKAFDLPHV--LPLAEALELIHTASLVHDDV--IDEADTRRGAA 93

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T + +++   AI++G+ +   AF +++  +    D +  +L   L  N+ +     G++ 
Sbjct: 94  TANARWNNQVAILSGDYIFARAFALLA--EAGYGDYVLKRLA-ELVCNLSV-----GEI- 144

Query: 166 DIQDEFIDETQVFM------IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            IQD  I +    M      IQK KT   +   CE G ++    + E  +L  +G  +G+
Sbjct: 145 -IQDHAIYQASRGMADYFERIQK-KTADFLEICCELGGLVGGMDREEAGKLAEYGHCIGM 202

Query: 220 IFQLADDLLDCEEDLPK 236
            FQ+ DDLLD E+   K
Sbjct: 203 AFQITDDLLDIEQTTEK 219


>gi|315163581|gb|EFU07598.1| polyprenyl synthetase [Enterococcus faecalis TX1302]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNVSGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|312910738|ref|ZP_07769577.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
 gi|311289001|gb|EFQ67557.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|315047266|ref|XP_003173008.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS
           118893]
 gi|311343394|gb|EFR02597.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS
           118893]
          Length = 491

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   I+ 
Sbjct: 233 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIA- 289

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183
              +L+D    +L+ ++  N     ++ G+ + +++  +DE+          + +QK  +
Sbjct: 290 ---RLRDPEVIELLGTVMAN-----LVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYL 341

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K+ +L+  +C + A++  +     E    FG NLG+ FQL DD+LD
Sbjct: 342 KSASLISKSCRAAALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLD 387


>gi|315150866|gb|EFT94882.1| polyprenyl synthetase [Enterococcus faecalis TX0012]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|257888791|ref|ZP_05668444.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733]
 gi|257824845|gb|EEV51777.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733]
          Length = 328

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+ + A+IE +H  +LIHDD+  +D   +RRG+P +  Q+  V ++ AG+ L    F+++
Sbjct: 70  AIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   T LK    N RS           ++ +L G++  + D +  E  V    +    KT
Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD
Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220


>gi|227552808|ref|ZP_03982857.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium
           TX1330]
 gi|257897275|ref|ZP_05676928.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12]
 gi|293378986|ref|ZP_06625141.1| polyprenyl synthetase [Enterococcus faecium PC4.1]
 gi|227178051|gb|EEI59023.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium
           TX1330]
 gi|257833840|gb|EEV60261.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12]
 gi|292642527|gb|EFF60682.1| polyprenyl synthetase [Enterococcus faecium PC4.1]
          Length = 328

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+ + A+IE +H  +LIHDD+  +D   +RRG+P +  Q+  V ++ AG+ L    F+++
Sbjct: 70  AIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   T LK    N RS           ++ +L G++  + D +  E  V    +    KT
Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD
Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220


>gi|307269989|ref|ZP_07551314.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
 gi|307272595|ref|ZP_07553847.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
 gi|306510733|gb|EFM79751.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
 gi|306513654|gb|EFM82261.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
 gi|315025798|gb|EFT37730.1| polyprenyl synthetase [Enterococcus faecalis TX2137]
 gi|315154679|gb|EFT98695.1| polyprenyl synthetase [Enterococcus faecalis TX0043]
 gi|315158962|gb|EFU02979.1| polyprenyl synthetase [Enterococcus faecalis TX0312]
 gi|315167121|gb|EFU11138.1| polyprenyl synthetase [Enterococcus faecalis TX1341]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|293389766|ref|ZP_06634208.1| polyprenyl synthetase [Enterococcus faecalis S613]
 gi|291080924|gb|EFE17887.1| polyprenyl synthetase [Enterococcus faecalis S613]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDFLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|86140643|ref|ZP_01059202.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832585|gb|EAQ51034.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 325

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 16/185 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK++R   V   A +     L     R  + IE IH  +L+HDD+  +D+ Y RRG  ++
Sbjct: 45  GKQMRPMFVFLVAKMLGDERLNDRTYRGASVIELIHTATLVHDDV--VDDSYRRRGFFSL 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    A++ G+ LL+    ++S       DN    L+  ++  + ++ M  G++L I
Sbjct: 103 NALWKNKIAVLVGDFLLSKGL-LLSI------DNEDFDLLQIIS--VAVREMSEGELLQI 153

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   D  I E   F I + KT  L+   C  GA   HAS+ + E +R FGE +G+ FQ+ 
Sbjct: 154 EKARDLDITEEVYFEIIRQKTATLIAACCAMGACAIHASKKDVEAMRKFGELIGLAFQIK 213

Query: 225 DDLLD 229
           DDL D
Sbjct: 214 DDLFD 218


>gi|227555199|ref|ZP_03985246.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           HH22]
 gi|307292276|ref|ZP_07572139.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
 gi|312905555|ref|ZP_07764669.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
 gi|227175657|gb|EEI56629.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           HH22]
 gi|306496691|gb|EFM66245.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
 gi|310631284|gb|EFQ14567.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
 gi|315162309|gb|EFU06326.1| polyprenyl synthetase [Enterococcus faecalis TX0645]
 gi|315574620|gb|EFU86811.1| polyprenyl synthetase [Enterococcus faecalis TX0309B]
 gi|315576540|gb|EFU88731.1| polyprenyl synthetase [Enterococcus faecalis TX0630]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|55379709|ref|YP_137559.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC
           43049]
 gi|55232434|gb|AAV47853.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC
           43049]
          Length = 280

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 14/204 (6%)

Query: 31  MQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           + +   + L   +R+ AL GGK++R  +              A+     IE +H  SL+ 
Sbjct: 19  LDSVEPEELADEVRHVALSGGKRVRPTVTVLVCEALGGEPADAVDFAVGIELVHNASLVI 78

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRG P     +    AIIA +GLL  AF + S+ +  ++    S+ M+ 
Sbjct: 79  DDI--IDESELRRGSPAAWEAFGHGPAIIASDGLLGEAFNLFSTDERAMQ--TVSESMVE 134

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L           G+ +++  E  +E +   + + KTGAL   A E GAI A +     E 
Sbjct: 135 LGE---------GEAMELVAEPSNEKEYMELARRKTGALFRAAAELGAIAADSDPYTVEA 185

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  + E +G+ FQ+ DD+LD   D
Sbjct: 186 VGQYAERVGVAFQMRDDVLDATAD 209


>gi|260063737|ref|YP_003196817.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501]
 gi|88783182|gb|EAR14355.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501]
          Length = 325

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 18/217 (8%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFN---VNHLTALRVGAA 78
           L +   H        LL+ I Y ++   GK++R   V   A L N   VN  T  R  + 
Sbjct: 17  LFEKKFHQSMSSKVPLLNRITYYIVNRKGKQMRPMFVFLTAKLLNEGQVNERT-YRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  SL+HDD+  +D  + RRG  +++  +    A++ G+ LL     ++ S     
Sbjct: 76  IELIHTASLVHDDV--VDESFKRRGFFSINALWKNKIAVLVGDFLLARG--MLLSVDNGD 131

Query: 139 KDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
            D +R  S  M  ++    LQ +   + LDI +E   E     I + KT  L+   C  G
Sbjct: 132 FDLLRIISAAMREISEGELLQ-LEKARRLDITEEVYYE-----IIRQKTATLIAACCSLG 185

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A          E  R FGE  G+ FQ+ DDL D  E+
Sbjct: 186 AASVRPDSEYVEMFRKFGERCGMAFQIKDDLFDYGEN 222


>gi|329944216|ref|ZP_08292475.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530946|gb|EGF57802.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 368

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 34/199 (17%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  L    A L +       ++   G A+E  H  +L HDD+  MD   +RRG P
Sbjct: 49  GGKRLRPVLALLTAQLGDPALAAGEQIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAP 106

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +    +    AI+ G+ L+  A +++++  P+              + H    + +  GQ
Sbjct: 107 SAQTVWGNSAAILTGDVLVARASQLVAALGPEA------------VMAHAKTFERLCMGQ 154

Query: 164 M---------LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +          D  D +I   QV      KTG+L+  +   GA++  A    +  +  FG
Sbjct: 155 LHETLPRPSGTDPVDHYI---QVL---ADKTGSLIAVSARYGAMLTGAGVRTERIVEEFG 208

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G+ FQLADD++D   D
Sbjct: 209 EKIGVAFQLADDVIDLMSD 227


>gi|307283879|ref|ZP_07564052.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
 gi|306503529|gb|EFM72776.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
 gi|315147034|gb|EFT91050.1| polyprenyl synthetase [Enterococcus faecalis TX4244]
          Length = 305

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|160883389|ref|ZP_02064392.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483]
 gi|237720619|ref|ZP_04551100.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4]
 gi|260172659|ref|ZP_05759071.1| octaprenyl-diphosphate synthase [Bacteroides sp. D2]
 gi|293368662|ref|ZP_06615269.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
 gi|315920952|ref|ZP_07917192.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156111109|gb|EDO12854.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483]
 gi|229450370|gb|EEO56161.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4]
 gi|292636304|gb|EFF54789.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
 gi|313694827|gb|EFS31662.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 324

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+     + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVARLYGAICPSTLHAAVSLELLHTASLVHDDV--VDESSERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++ G+ LL  A  ++ +  T       S  ++ L   +G Q +  G++L   +
Sbjct: 103 IFNNKVAVLTGDYLL--ATSLVHAELTN------SHRIIQLVSTLG-QDLADGELLQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    E   F + + KT AL     ++ A      + E E  R  GE +GI FQ+ DD
Sbjct: 154 VSNHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDD 213

Query: 227 LLD 229
           + D
Sbjct: 214 IFD 216


>gi|77361572|ref|YP_341147.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76876483|emb|CAI87705.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 323

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          + +   +E IH  +L+HDD+  +D   +RRG PT +
Sbjct: 43  GGKRVRPMLAILAARALGYQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            ++    +++ G+ + T +F++ +   K Q+      Q++   T+ I    +L  Q+++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQLMVGLGKMQVM-----QVLADATNIIAEGEVL--QLMNC 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     +   KT  L   A    AI+   +Q   + L  +G +LG  FQL DD+
Sbjct: 154 NDPDTTEASYMQVIYSKTAKLFEAATGLAAIITEQNQATLDALNLYGMHLGTAFQLVDDV 213

Query: 228 LDCEED 233
           LD   D
Sbjct: 214 LDYNAD 219


>gi|326403627|ref|YP_004283709.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301]
 gi|325050489|dbj|BAJ80827.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301]
          Length = 344

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        + + A +E IH  +L+HDD+  +D   +RRG  + +
Sbjct: 63  GGKRLRPLLTLAAARLCGYRGERHIHLAACVEFIHTATLLHDDV--VDESGLRRGLASAN 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L   AFE++    +   D +R  ++ + +  I    +L  Q+    
Sbjct: 121 AVFGNKASVLVGDFLFARAFELMVEDGSL--DVLR--ILCNASATIAEGEVL--QLTTQN 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D   D  + F + + KT AL   ACE G ++A         L  +G  LG+ FQL DD L
Sbjct: 175 DLSTDIPRYFKVIEGKTAALFAAACEVGGVVADRDSAVCGALAGYGAALGMAFQLVDDAL 234

Query: 229 DCEED 233
           D   D
Sbjct: 235 DYAAD 239


>gi|294139556|ref|YP_003555534.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12]
 gi|293326025|dbj|BAJ00756.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12]
          Length = 323

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLTILAARAIDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L  +++   ML+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELG-SMKVLEMLADATNVLAEGEV-LQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTSEENYMRVIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|293572766|ref|ZP_06683720.1| polyprenyl synthetase [Enterococcus faecium E980]
 gi|291607116|gb|EFF36484.1| polyprenyl synthetase [Enterococcus faecium E980]
          Length = 328

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+ + A+IE +H  +LIHDD+  +D   +RRG+P +  Q+  V ++ AG+ L    F+++
Sbjct: 70  AIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   T LK    N RS           ++ +L G++  + D +  E  V    +    KT
Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD
Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220


>gi|269218351|ref|ZP_06162205.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269212210|gb|EEZ78550.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 316

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 18/190 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  LV   A L       A L    A+E  H  SL HDD+  MD+  +RRG P+V
Sbjct: 30  GGKRLRPALVLLAAELGPRPGAEAVLDSAVAVELTHLASLYHDDV--MDDAPMRRGVPSV 87

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLSLTH-NIGLQGMLGGQ 163
              +    AI+AG+ L   A  + S   P+  +L      +L     H  IG +  +   
Sbjct: 88  QSLFGNSVAILAGDVLFARASLVTSKLGPQAVKLHATTFERLCQGQLHETIGPRASVS-- 145

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               +D +I       + + KTG+L+  +   G + +  S    + L  +GE +G+ FQL
Sbjct: 146 ---PRDHYI------RVLEDKTGSLIATSARYGVLFSGGSWELADALAQYGECIGVAFQL 196

Query: 224 ADDLLDCEED 233
           ADD++D E D
Sbjct: 197 ADDVIDIESD 206


>gi|124516584|gb|EAY58092.1| trans-hexaprenyltranstransferase [Leptospirillum rubarum]
          Length = 330

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 97/196 (49%), Gaps = 21/196 (10%)

Query: 49  GGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  L  +    S ++  H++ L   A +E IH  +L+HDD+  +D+  +RRGK +
Sbjct: 49  GGKRLRPLLMIIASRISGYSGPHISLL--SAVVEFIHTATLLHDDV--VDHAEMRRGKLS 104

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +   TA++ G+ L   A  + +         I   L L+       + M  G++L+
Sbjct: 105 ANQIWGNQTAVLVGDYLYATALWMATGVHNH---EINDTLTLAC------RKMSEGEVLE 155

Query: 167 -IQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            I D  +   E     + + KT AL    C  GAI+  A   +K+ L  FG N+G+ FQ+
Sbjct: 156 LILDNNLSAREEDYLSVVECKTAALTAGTCRIGAILGGADTEKKKALEDFGYNIGMSFQI 215

Query: 224 ADDLLDC---EEDLPK 236
           ADD LD    EE L K
Sbjct: 216 ADDALDYMAREERLGK 231


>gi|29829548|ref|NP_824182.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29606656|dbj|BAC70717.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
           MA-4680]
          Length = 394

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 23/226 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  + +D++   +      H   +H D   +A       GK IR  LV            
Sbjct: 75  ELRRAVDSLPGSMRRIALHHFGWEHADGTPAAGNA----GKAIRPALVLAAVRALGGPQS 130

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           +A+R  AA+E IH ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A  +
Sbjct: 131 SAVRAAAAVELIHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDADAILAGDALQALAHRL 188

Query: 131 ISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQK 182
           ++    P +       +  ++ L           GQ  D   E     +V +     + +
Sbjct: 189 LAEDPHPASAAAAARLAACVIELC---------AGQHADTAMERRGPGEVTLDECLAMAE 239

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            KTGAL+  AC  GA+ A A + + E L  FG   G+ FQL DD++
Sbjct: 240 AKTGALLGCACALGALYAGAEEEDVEALDAFGREAGLAFQLIDDVI 285


>gi|256378414|ref|YP_003102074.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255922717|gb|ACU38228.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 557

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 17/205 (8%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            +  D +L   RYALL  GK +R  L+   A     +    +    A+E +H  SL+HDD
Sbjct: 251 PETGDPVLDISRYALLTPGKMLRPLLLASAAGAVGGDVERVVPAALAVEYLHVGSLVHDD 310

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--------PKTQLKDNIR 143
           +  +D+  +RRG+P+V  ++    AI+ G+ L+   F  +++                  
Sbjct: 311 V--IDDDEVRRGQPSVQHRFGVPEAIVVGDALIFKTFSAVAACVELGVTAEAALGAARAI 368

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           +   + +     L+G L         +++       +  +KTGAL   AC +GA++    
Sbjct: 369 ADAGVDVCRGQALEGALAADPTHPLGDYV------TVMALKTGALFRGACRAGALLGGGG 422

Query: 204 QNEKERLRCFGENLGIIFQLADDLL 228
               E +  + E+LG+ FQ+ DDLL
Sbjct: 423 PEAVEAVTSYAEHLGLAFQVHDDLL 447


>gi|254458444|ref|ZP_05071869.1| polyprenyl synthetase [Campylobacterales bacterium GD 1]
 gi|207084752|gb|EDZ62039.1| polyprenyl synthetase [Campylobacterales bacterium GD 1]
          Length = 295

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)

Query: 37  DRLLSAIRY--------ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +RL+  I Y         L GGK++R+ L+ + A      H  A  + A +E IH  SL+
Sbjct: 9   ERLIKEIDYDEVTRLFNMLSGGKRLRAKLILKIAP----EHEKAPLLAAIVELIHGASLL 64

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG  +V+      TA++ G+ L + AF    +   +   +I   +  
Sbjct: 65  HDDV--IDESITRRGVASVNATDGSKTAVMLGDILYSKAF----TELVEFDRDIAKSIAS 118

Query: 149 SLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           S+T       +  G+M D++  DEF  DE +   +  +KT  L+  A  + A++      
Sbjct: 119 SVT------ALSKGEMQDVKMADEFNEDEEKYLDMLYLKTATLIEAAAYASALLVG---K 169

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
           + ++   +G+NLG+ FQ+ DD+LD   D
Sbjct: 170 DADKYGVYGKNLGLSFQIIDDILDITAD 197


>gi|153825628|ref|ZP_01978295.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2]
 gi|149740658|gb|EDM54765.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2]
          Length = 304

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 14/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  L    A        +H TA    A IE IH  +L+HDD+  +D   +RRGK 
Sbjct: 24  GGKRLRPLLAVLSAKALGYQGSHHTTA---AAFIEFIHTATLLHDDV--VDESDLRRGKA 78

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T +  +    +++ G+ + T +F+++    T+L  +++   ++S   N+  +G +  Q++
Sbjct: 79  TANAAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKLMSDAVNVIAEGEVQ-QLM 132

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL D
Sbjct: 133 NCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLID 192

Query: 226 DLLDCEED 233
           D++D   D
Sbjct: 193 DVMDYTSD 200


>gi|328877029|gb|EGG25392.1| trans-prenyltransferase [Dictyostelium fasciculatum]
          Length = 485

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 21/193 (10%)

Query: 45  YALLGGKKIRS---FLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMD 96
           Y  L GK+IR     L++ C  L    ++T      +++   +E IH  +L+HDD+  +D
Sbjct: 202 YFQLKGKRIRPTIILLLSRC--LLQQKNITEPIASQIKLAEIVEMIHTATLVHDDV--ID 257

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RR  P+V+  +    +I+ G+ LL  A  ++S    QL++   S+L+     +  L
Sbjct: 258 EATTRRDVPSVNKSFSNKLSILCGDYLLARASVLLS----QLRNPDVSELI-----STSL 308

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             ++ G+ + ++       Q      +KT +L+  +C++ A++     +       FG+N
Sbjct: 309 ADLVEGEFMQVKSNESSFEQYLRKTYLKTASLISNSCKATALLGGEDAHTANLAFEFGKN 368

Query: 217 LGIIFQLADDLLD 229
           LG+ FQL DDLLD
Sbjct: 369 LGLAFQLIDDLLD 381


>gi|262198874|ref|YP_003270083.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365]
 gi|262082221|gb|ACY18190.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365]
          Length = 355

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 20/192 (10%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           LGGK +R   V   A +         ++  A+E +H  +L+HDD+  +D G  RRG PT 
Sbjct: 73  LGGKHLRPMCVALAAKMGTGFDAHGRQLAMAVELVHTATLLHDDV--VDIGDSRRGVPTA 130

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD------NIRSQLMLSLTHNIGLQGMLG 161
              Y    ++ AG+ LL  A   I   +T L D       I  +++L+ +  +  +G LG
Sbjct: 131 RTIYGNAASVFAGDWLLVDALRRIR--QTGLSDLLDRMLAIIEEMILAESLQLERRGSLG 188

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                       E   F + + KT AL  +A  +G       ++    L  +G +LG+ F
Sbjct: 189 DS----------EEVYFQVVEGKTAALFRWAMYAGGRAGGLDEDACLALERYGRHLGVAF 238

Query: 222 QLADDLLDCEED 233
           Q+ DDLLD   D
Sbjct: 239 QVVDDLLDFSGD 250


>gi|315501200|ref|YP_004080087.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315407819|gb|ADU05936.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 346

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 18/185 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   + +    +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 65  GGKRFRPLLVALGAQFGDPDTDQVVPAAVVMELTHLATLYHDDV--MDEAAVRRGAPSAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++    AI+ G+ L   A +I +   P+      ++++    L H         GQ+ +
Sbjct: 123 SRWTNSVAILVGDYLFARAADIAADLGPEAV---RLQARTFARLVH---------GQIAE 170

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +     D    ++ +   KTG+L+  +   G +   A+    E L  +GE +G+ FQL+
Sbjct: 171 TVGPRDTDPVAHYLHVIAEKTGSLIATSARFGGMFGGAAPEHVEALAEYGEIIGVAFQLS 230

Query: 225 DDLLD 229
           DDLLD
Sbjct: 231 DDLLD 235


>gi|302864915|ref|YP_003833552.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302567774|gb|ADL43976.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 346

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 18/185 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   + +    +     +E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 65  GGKRFRPLLVALGAQFGDPDTDQVVPAAVVMELTHLATLYHDDV--MDEAAVRRGAPSAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++    AI+ G+ L   A +I +   P+      ++++    L H         GQ+ +
Sbjct: 123 SRWTNSVAILVGDYLFARAADIAADLGPEAV---RLQARTFARLVH---------GQIAE 170

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +     D    ++ +   KTG+L+  +   G +   A+    E L  +GE +G+ FQL+
Sbjct: 171 TVGPRDTDPVAHYLHVIAEKTGSLIATSARFGGMFGGAAPEHVEALAEYGEIIGVAFQLS 230

Query: 225 DDLLD 229
           DDLLD
Sbjct: 231 DDLLD 235


>gi|256760927|ref|ZP_05501507.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3]
 gi|256682178|gb|EEU21873.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3]
          Length = 328

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+   +   TA+  G+ L    F+++
Sbjct: 70  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSHFGNSTAVYTGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 128 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 177 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 220


>gi|313894963|ref|ZP_07828522.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas
           sp. oral taxon 137 str. F0430]
 gi|312976416|gb|EFR41872.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas
           sp. oral taxon 137 str. F0430]
          Length = 325

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 17/224 (7%)

Query: 16  IDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRS---FLVTECASLFNVNH 69
            D I +DL +L+TA       +  L+S I   L+  GGK++R     L     + F+ + 
Sbjct: 6   FDVIEEDLTVLETALEAALSSDSALVSDIGAHLVSSGGKRLRPALFLLAARGGTAFDRDR 65

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A+ +  A+E IH  SL+HDD+  +D    RRG  T + ++    AI++G+ +   AF+
Sbjct: 66  --AMPIAVALELIHTASLVHDDV--IDEADTRRGAATTNAKWGNQVAILSGDYIFARAFK 121

Query: 130 IISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            ++         +R + L+ +L+    LQ     Q+   +D + +        + KT   
Sbjct: 122 QVARVGYSWHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERI------RKKTADF 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   CE GA +   S  +      +G  +G+ FQ+ DDLLD ++
Sbjct: 176 LEICCELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQ 219


>gi|256380651|ref|YP_003104311.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255924954|gb|ACU40465.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 333

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 106/204 (51%), Gaps = 18/204 (8%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLI 88
           ++++ N  + +++     GGK+IR  L T  A+ F  + +  + ++  A +E  H  +L 
Sbjct: 37  VRSEFNPVMETSLHLVEAGGKRIRP-LFTILAAQFGPSWDRESVVKAAAVVELTHLATLY 95

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  MD   +RRG  + + +++   AI+ G+ L  +A  +++        ++ ++   
Sbjct: 96  HDDV--MDEATMRRGAASANAKWNNSIAILTGDYLFAHASTLVA--------DLGTEAAR 145

Query: 149 SLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQN 205
           +++   G   ++ GQM +     E  D  + ++     KTG+L+  A   G + + A++ 
Sbjct: 146 TISRTFG--ELVTGQMRETMGPREGEDPVEHYLTTIAEKTGSLIATAARFGGMFSDATEE 203

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
           +   L+ +G+ +G  FQ++DD++D
Sbjct: 204 QVAALQAYGDVIGSAFQISDDVID 227


>gi|114798232|ref|YP_759407.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114738406|gb|ABI76531.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 337

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 9/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A      +     + AA+E IH  +L+HDD+  +D   +RRGKP   
Sbjct: 57  GGKRLRPMITLIAAHAVGKANAATHALAAAVEFIHTATLLHDDV--VDESDLRRGKPAAK 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   AF ++    +    +I ++L  + T  +  +G +  Q+  + 
Sbjct: 115 AIWGNKAAILVGDFLFARAFNLLVEANSL---DILNRLATAST--VIAEGEV-RQLAAMA 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              +   +   I + KTGAL   A E+GA M+   +   + L  +G+NLG+ FQ+ DD L
Sbjct: 169 TRDLPTEEYLAIVEAKTGALFEAAAETGA-MSAGGEEYSDALATYGKNLGLAFQIIDDAL 227

Query: 229 D 229
           D
Sbjct: 228 D 228


>gi|109900040|ref|YP_663295.1| trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c]
 gi|109702321|gb|ABG42241.1| Trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c]
          Length = 323

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   N+       + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ +      D++R   +LS   N+  +G +  Q+++  
Sbjct: 101 EVFGNQASVLVGDFLYTRSFQMMVT-----LDSMRVMQILSDATNVIAEGEV-LQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++   S+  +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYASD 219


>gi|163786379|ref|ZP_02180827.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1]
 gi|159878239|gb|EDP72295.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1]
          Length = 325

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 34/198 (17%)

Query: 50  GKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK++R   V   A + N   ++    R  + IE IH  +L+HDD+  +D+   RRG  ++
Sbjct: 45  GKQMRPMFVFLVAKMMNNGEVSERTYRGASVIELIHTATLVHDDV--VDDSNRRRGFFSI 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQG 158
           +  +    A++ G+ LL+                    L+LS+ +N         + ++ 
Sbjct: 103 NALWKNKIAVLIGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVRE 144

Query: 159 MLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           M  G++L I+      I E   + I + KT  L+   C  GA     +  E E +R FGE
Sbjct: 145 MSEGELLQIEKARQLDITEAVYYDIIRQKTATLIAACCSLGAASVKPNSPEVESMRKFGE 204

Query: 216 NLGIIFQLADDLLDCEED 233
            +G+ FQ+ DDL D  E+
Sbjct: 205 LIGMAFQIKDDLFDYGEE 222


>gi|312899735|ref|ZP_07759057.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
 gi|311293131|gb|EFQ71687.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
          Length = 300

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A+IE +H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++
Sbjct: 47  ATALAASIELLHTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLL 104

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   + LK    N RS           ++ +L G++  + + +  E  +    K    KT
Sbjct: 105 SDYSSSLKSIQLNSRS-----------MEKVLTGELGQMDNRYNFEVTIDQYLKNISGKT 153

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+LD
Sbjct: 154 AELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILD 197


>gi|332531718|ref|ZP_08407603.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038694|gb|EGI75136.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 323

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          + +   +E IH  +L+HDD+  +D   +RRG PT +
Sbjct: 43  GGKRVRPMLAILAAKALGYQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            ++    +++ G+ + T +F++ +   K Q+      Q++   T+ I    +L  Q+++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQLMVGLGKMQIM-----QVLADATNIIAEGEVL--QLMNC 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     +   KT  L   A    AI+    Q   + L  +G +LG  FQL DD+
Sbjct: 154 NDPDTTEASYMQVIYSKTAKLFEAATGLAAIITEQDQATLDALNLYGMHLGTAFQLVDDV 213

Query: 228 LDCEED 233
           LD   D
Sbjct: 214 LDYNAD 219


>gi|199598547|ref|ZP_03211964.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
 gi|199590589|gb|EDY98678.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
          Length = 325

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 19/191 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R       +   + +    + + AAIE +H  +LIHDD+  +D    RR + T+ 
Sbjct: 46  GGKLLRPAYCLLFSRFQDTDREKMIALAAAIETLHTATLIHDDI--IDKSPTRRNQVTIQ 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            Q+   TA+ AG+ L    F++++   + L+         S+  + G ++ +L G++  +
Sbjct: 104 KQFGPDTAVYAGDYLFVVCFKLLAHYASSLR---------SIQQDSGSMEKILKGELDQM 154

Query: 168 QDEFIDETQVFMIQKMK-----TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              +  +TQ+ +   +K     TG L   +C  GA  +  + N  +     G N+GI FQ
Sbjct: 155 ATRY--QTQITINDYLKQVSGKTGQLFALSCFIGAYESGGTTNFAKTAEKIGMNIGIAFQ 212

Query: 223 LADDLLDCEED 233
           L DD+LD   D
Sbjct: 213 LLDDILDYTSD 223


>gi|326318388|ref|YP_004236060.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375224|gb|ADX47493.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 326

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 8/183 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   +            + A IE IH  +L+HDD+  +D   +RRG+PT +
Sbjct: 47  GGKRLRPALLLLMSGALGYQGAQRFNLAAVIEFIHTATLLHDDV--VDESTMRRGRPTAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        D++R   +LS   NI  +G +  Q+++  
Sbjct: 105 ENFGNPASVLVGDFLHSRAFQMMVD-----ADDMRVMQILSEATNIIAEGEVQ-QLMNTH 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   +    A++A A    +E    +G+ LG  FQ+ DD+L
Sbjct: 159 DATLDEQGYLEVIRSKTAKLFEASARLAAVLARAPAPIEEACAEYGKALGTAFQVIDDVL 218

Query: 229 DCE 231
           D +
Sbjct: 219 DYD 221


>gi|299145219|ref|ZP_07038287.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
 gi|298515710|gb|EFI39591.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
          Length = 324

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+     + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVARLYGAICPSTLHAAVSLELLHTASLVHDDV--VDESSERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---D 166
            ++   A++ G+ LL  A  ++ +  T       S  ++ L   +G Q +  G++L   +
Sbjct: 103 IFNNKVAVLTGDYLL--ATSLVHAELTT------SHRIIQLVSTLG-QDLADGELLQLSN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +    E   F + + KT AL     ++ A      + E E  R  GE +GI FQ+ DD
Sbjct: 154 VSNHSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDD 213

Query: 227 LLD 229
           + D
Sbjct: 214 IFD 216


>gi|262376679|ref|ZP_06069907.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145]
 gi|262308389|gb|EEY89524.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145]
          Length = 325

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A      +L   R + A IE +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 46  GGKRMRPIMCLLAAKACGAENLEPHRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPTA 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  ++  TA++ G+ L++ AF+++            + ++L    + G   +  G++L +
Sbjct: 104 NATWNNQTAVLVGDFLISRAFDLLVD---------LNNMVLLKDFSTGTCEIAEGEVLQL 154

Query: 168 QDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q +   ET       I   KT  L   A E  AI++   +  ++ L+ F  + G  FQ+ 
Sbjct: 155 QSQHQPETTEATYLNIIHGKTSRLFELATEGAAILSDKDEF-RQPLKTFAGHFGNAFQII 213

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 214 DDILDYTSD 222


>gi|257453962|ref|ZP_05619238.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60]
 gi|257448627|gb|EEV23594.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60]
          Length = 347

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 24/189 (12%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +   C+ + N      A+ +GA  E +H  +L+HDD+  +D   +RRGKPT 
Sbjct: 68  GGKRMRPLISLLCSRICNDQPSQAAMHLGAITEMLHTATLVHDDV--IDASGMRRGKPTA 125

Query: 108 HIQYDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +  +D  TA++ G+ L+  +F ++    S P  QL  +             G   +  G+
Sbjct: 126 NATWDNATAVLVGDYLIARSFNLLVGFGSLPLLQLFSD-------------GTCDIAEGE 172

Query: 164 MLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +L +Q   D    E     I   KT  L   A +  AI+ +  +   +    FG++ G  
Sbjct: 173 VLQLQHQHDPKATEADYMKIIDGKTSRLFMMASQGVAILENRPE-YNDAFAKFGQHFGNA 231

Query: 221 FQLADDLLD 229
           FQ+ DD+LD
Sbjct: 232 FQIIDDVLD 240


>gi|19704873|ref|NP_602368.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296328953|ref|ZP_06871461.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|19712760|gb|AAL93667.1| Heptaprenyl diphosphate synthase component II [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296153942|gb|EFG94752.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 326

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L GK +RS L+  CA L   +  N     ++ A +E  H  SLIHDD+  +D+   RRGK
Sbjct: 40  LSGKMLRSKLLLLCAFLGTNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++  +Y +  A+ AG+ L+   F         L + +    +LS T      G +   +
Sbjct: 98  VSIQGKYGKDAAVFAGDFLIARIF--YYGAVENLNEAVS---ILSKTVEYMCIGEIEQDL 152

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              Q E I E + F   + KT AL   A   GA  A  S+   ++L  F +NLG++FQL 
Sbjct: 153 CRYQ-ENISEKKYFENIERKTAALFQAASYIGAKEAGCSEEIIQKLELFVKNLGLMFQLK 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|239983545|ref|ZP_04706069.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291455362|ref|ZP_06594752.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291358311|gb|EFE85213.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 297

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 6   GGKAVRPALALLSAEAAGAAPEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 63

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ L   A EI+    T        +L  +       + ++ GQ  DI 
Sbjct: 64  KVHGPAQAILAGDALFALANEILLELGTLEAGRAARRLTTAS------RALIDGQAQDIS 117

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 118 YEHRERVSVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALERYGYHLGLAFQAVD 177

Query: 226 DLL 228
           DLL
Sbjct: 178 DLL 180


>gi|255575167|ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ricinus communis]
 gi|223532097|gb|EEF33905.1| solanesyl diphosphate synthase, putative [Ricinus communis]
          Length = 420

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 23/226 (10%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68
            + + DDL  L Q    +    N  L+SA       GGK++R    FLV    A +  + 
Sbjct: 102 FEVVADDLQTLNQNLRLIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVARATAEVIGLK 161

Query: 69  HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    AI+AG+ +   
Sbjct: 162 ELTIKHRRLAEIIEMIHTASLIHDDV--LDESNMRRGKETVHQLYGTRVAILAGDFMFAQ 219

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
           +   ++        N+ +  ++ L   + ++    G++      F   ++  +  +    
Sbjct: 220 SSWYLA--------NLENIEVIKLISQV-IKDFASGEIKQASSLFDCDVELEEYLIKSYY 270

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  + +  AI +   ++  E++  +G+NLG+ FQ+ DD+LD
Sbjct: 271 KTASLIAASTKGAAIFSGVDRSVAEQMYEYGKNLGLSFQVVDDILD 316


>gi|311741756|ref|ZP_07715567.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum
           DSM 15272]
 gi|311314762|gb|EFQ84668.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum
           DSM 15272]
          Length = 332

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V  CA   +      +     +E  H  +L HDD+  MD    RRG  + +
Sbjct: 50  GGKRFRPLVVALCAEFGDPAAPGVVPSAVVVELTHLATLYHDDV--MDEADKRRGALSAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-I 167
            ++D   AI+ G+ L   A +I+S   T   + +R Q             ++ GQ+ + I
Sbjct: 108 ARWDNTLAILVGDYLFAQASDIVS---TLGPEAVRIQART-------FSRLVRGQIRETI 157

Query: 168 QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                D  Q ++ +   KTG+L+  +   GA+M+ A    +  L  FGE +G  FQL DD
Sbjct: 158 GPGDGDPLQHYLGVVADKTGSLIATSARFGAMMSAAPVEVEHALTEFGERIGAAFQLRDD 217

Query: 227 LLDC 230
           ++D 
Sbjct: 218 IIDV 221


>gi|297190552|ref|ZP_06907950.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297150531|gb|EDY61773.2| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 372

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 81  GGKAVRPALALLSAEAAGAAPEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 139 KVHGPAQAILVGDALFAVANEVLLESGTVEAGRAARRLTTAS------RKLIDGQAQDIS 192

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  D
Sbjct: 193 FEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADERTADTLEAYGYHLGLAFQAVD 252

Query: 226 DLL 228
           DLL
Sbjct: 253 DLL 255


>gi|322513608|ref|ZP_08066706.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976]
 gi|322120568|gb|EFX92468.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976]
          Length = 331

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGDKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTSV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|297842625|ref|XP_002889194.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
 gi|297335035|gb|EFH65453.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+   IE IH  SLIHDD+  +D   +RR
Sbjct: 124 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRR 181

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TVH  +    A++AG+ +   A   ++        N+ +  ++ L   + ++    G
Sbjct: 182 GKETVHELFGTRVAVLAGDFMFAQASWYLA--------NLENLQVIKLISQV-IKDFASG 232

Query: 163 QMLDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F  + ++  ++++   KT +L+  + +  AI +    +  E++  FG+NLG+
Sbjct: 233 EIKQASSLFDCDAKLDDYLLKSFYKTASLVAASTKGAAIFSRVETDVTEQMYEFGKNLGL 292

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 293 SFQIVDDILD 302


>gi|169631007|ref|YP_001704656.1| polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus ATCC
           19977]
 gi|169242974|emb|CAM64002.1| Probable polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
           abscessus]
          Length = 328

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 18/188 (9%)

Query: 49  GGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  F V    +  + ++   +  GA  E IH  +L HDD+  MD    RRG P+ 
Sbjct: 48  GGKRFRPLFTVLAAQTGPDPDNDEVILAGAVCELIHLATLYHDDV--MDEAQKRRGVPSA 105

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + ++    AI+AG+ LL  A  ++S    T ++  I ++    L         + GQM +
Sbjct: 106 NARWGNNVAILAGDYLLATASRLVSRLGPTAVR--IVAETFAEL---------VTGQMRE 154

Query: 167 IQ--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                E  DET+ ++ +   KTG+L+  A   GA+ +    ++ ERL   G  +G  FQ+
Sbjct: 155 TVGVPEGGDETEHYLKVIHEKTGSLIAAAGRFGAMTSRCDDDQIERLSRLGAIVGTAFQI 214

Query: 224 ADDLLDCE 231
           +DD++D E
Sbjct: 215 SDDIIDIE 222


>gi|189218934|ref|YP_001939575.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
           V4]
 gi|189185792|gb|ACD82977.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
           V4]
          Length = 394

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 25/208 (12%)

Query: 39  LLSAIRYALLG-GKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ++   RY L   GK+IR  LV    + +     NHL    +   +E IH  +L+HDD+  
Sbjct: 96  IVPLFRYVLASEGKRIRPLLVLLSAKGSGGIGENHLY---LAVVVEMIHLATLVHDDI-- 150

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D   +RRG P+V  ++    +++ G+ L   A ++           +   ++ S+ + +
Sbjct: 151 LDGASMRRGIPSVTSRWGSEISVLLGDNLFAQALKVCC--------RLHPDIIQSVANGV 202

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            +  +  G++L  +  F   + E +   I +MKTG L    CE  A +  AS+   E L 
Sbjct: 203 CV--VCSGEILQTRRRFDWNLLEEEYLKIIQMKTGELFRIPCELAARLNSASRTVSEALG 260

Query: 212 CFGENLGIIFQLADDLLD---CEEDLPK 236
            FG+ LG  +Q+ DD LD    EE++ K
Sbjct: 261 RFGQALGSSYQIYDDCLDLFGSEENVGK 288


>gi|325286900|ref|YP_004262690.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489]
 gi|324322354|gb|ADY29819.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489]
          Length = 325

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFN---VNHLTALRVGAA 78
           L +   H        LL+ I Y ++   GK++R   V   A L +   VN  T  R  + 
Sbjct: 17  LFEKKFHASMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLVSGGKVNERT-YRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D+   RRG  +V+  +    A++ G+ LL+    ++S      
Sbjct: 76  IELIHTATLVHDDV--VDDSNKRRGFFSVNALWKNKIAVLVGDFLLSKGL-LLSI----- 127

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACES 195
            DN    L+  ++  + ++ M  G++L I+      I E   + I + KT  L+   C  
Sbjct: 128 -DNGDFDLLKIIS--VAVREMSEGELLQIEKARKLDITEDVYYEIIRQKTATLIAACCSL 184

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GA   +   ++ E  R FGE +G+ FQ+ DDL D
Sbjct: 185 GACSVNPDSDDVETFRKFGELIGMAFQIKDDLFD 218


>gi|262201095|ref|YP_003272303.1| trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247]
 gi|262084442|gb|ACY20410.1| Trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247]
          Length = 338

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 38/217 (17%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI- 79
           DD++ + A+H+              A  GGK+ R       A          +   A + 
Sbjct: 38  DDVMTEAATHL--------------AKAGGKRFRPMFAVLAAQFGERPDADEVITSATVV 83

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L HDD+  MD   +RRG P+ + ++    AI++G+ L   A  ++S   T   
Sbjct: 84  EMIHLATLYHDDV--MDEAPLRRGAPSANARWSNSVAILSGDFLFARASRLVS---TLGP 138

Query: 140 DNIR------SQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           D +R      ++L+   +   +G++   GG  ++             +   KTG+L+  A
Sbjct: 139 DAVRIIAETFAELVTGQMRETVGVKA--GGDPIE---------HYLRVVWEKTGSLIAAA 187

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              GA+ + A+ ++ ERL   G+ +G  FQ++DD++D
Sbjct: 188 GRFGAMASGATPDDVERLSRIGDVVGTAFQVSDDIID 224


>gi|227431314|ref|ZP_03913367.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352907|gb|EEJ43080.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 332

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 16/196 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +AIR     GK +R  L    + L +  +   A+ +GA+IE +H  +LIHDD+  +D   
Sbjct: 40  NAIRSQASAGKLVRPALTLLFSELTDAPYNQKAIVLGASIELLHLATLIHDDI--IDESK 97

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+ ++   + + TA+ AG+ LLT    +++       DNI++   L+L     L+ +
Sbjct: 98  LRRGQDSIQAHFGKDTAVYAGDYLLTGMLSLLND-----ADNIQAN-KLALE---ALRNI 148

Query: 160 LGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGE 215
           L G++    + ++ +T           KT AL   +   GA  +    ++  + +   GE
Sbjct: 149 LFGELTQKHNRYLTDTSFDNCLTQITGKTAALFKLSVLFGATSSDGVSSQLLDVVGKLGE 208

Query: 216 NLGIIFQLADDLLDCE 231
           NLGI FQL DD LD E
Sbjct: 209 NLGIAFQLLDDYLDFE 224


>gi|71744686|ref|XP_826973.1| farnesyl pyrophosphate synthetase [Trypanosoma brucei TREU927]
 gi|70831138|gb|EAN76643.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei]
          Length = 359

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 22/202 (10%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSM 95
           L++ + +AL+     + F  ++  SL ++   T    LR+G   E IH  +L+HDD+  +
Sbjct: 73  LVAMMAHALVPPHMSQQFQASDIGSLDDIPSGTIRPFLRLGEVTELIHTAALVHDDV--I 130

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152
           D+  +RRGKP +H  +D   A++AG+ LL  A   I+S   P+            + +  
Sbjct: 131 DDSEMRRGKPALHCVHDVKRAVLAGDFLLARASLWIASLCVPR------------IVVLM 178

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              L+ +  G+M+ ++  F D  +       KTG+L+  +  + A++A  S +  E    
Sbjct: 179 TTALEDLTRGEMMQMEGCF-DLERYEEKTYCKTGSLIANSLAATAVLADPSNSAHEVAAG 237

Query: 213 -FGENLGIIFQLADDLLDCEED 233
            +G  LGI FQ+ DD LD   D
Sbjct: 238 EYGRRLGIAFQIVDDCLDITGD 259


>gi|288928710|ref|ZP_06422556.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288329694|gb|EFC68279.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 325

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+      F      A      +E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  GGKRMRPILILLMTKSFGKVTSVAQYAAVGLELLHTASLVHDDV--VDESGERRGQASVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLD 166
             Y+   A++ G+ +L+ A  +++  +T   D +   ++L  +L++   LQ      + +
Sbjct: 102 ASYNNKVAVLVGDYILSTA--LLNIARTNDCDIVCDLAELGRTLSNGEILQ------LTN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           I +    E   F + + KT AL       GA    A +   E  R FG N+G+IFQ+ DD
Sbjct: 154 IANTNFSEEVYFEVIRQKTAALFEACAVIGAKAGGADRQAVEAARAFGRNVGVIFQIRDD 213

Query: 227 LLD 229
           + D
Sbjct: 214 IFD 216


>gi|206890930|ref|YP_002249297.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742868|gb|ACI21925.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 322

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 17/195 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   +   A L        + + A IE +H  SL+HDD+  +D   +RRG+ + +
Sbjct: 43  GGKRLRPLFLLISADLAGYREYKRVIMAAVIEALHTASLLHDDV--VDEAELRRGQVSAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ L   A  +  + ++        Q+M +L+       M  G++L + 
Sbjct: 101 RIWGNQVTVLLGDYLYAKALHVSVAQESL-------QIMEALSW--ATSQMAEGEILQLM 151

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D  I   +   I   KT  L+  AC    I+A  S+ + + L  FG N+G+ FQ+ D
Sbjct: 152 KAGDPTITFNEYIKIITGKTAGLIRAACRIAGILAKLSEEKIQALTDFGHNIGVAFQMID 211

Query: 226 DLLDC---EEDLPKK 237
           D+LD    E +L KK
Sbjct: 212 DILDYVADESELGKK 226


>gi|94312038|ref|YP_585248.1| polyprenyl synthetase [Cupriavidus metallidurans CH34]
 gi|93355890|gb|ABF09979.1| octaprenyl diphosphate synthase [Cupriavidus metallidurans CH34]
          Length = 325

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A  F+        + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 46  GGKRLRPVILLLSARAFDYEGHRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++    +     +R   +LS   N+  +G +  Q+L++ 
Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVEAGS-----MRIMEILSNATNVIAEGEVL-QLLNMH 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + + KT  L   + + GA++A A    +E    +G  +G  FQL DD+L
Sbjct: 158 DPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDML 217

Query: 229 D 229
           D
Sbjct: 218 D 218


>gi|302341992|ref|YP_003806521.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638605|gb|ADK83927.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
          Length = 348

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 16/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    V      R  A  E +H  +L+HDD+  +D   +RRG+P   
Sbjct: 68  GGKRLRPVLFMLAAQ--AVGGAGDFRRAAIFEYLHAATLLHDDV--IDEAGLRRGRPAAR 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             Y     I+ G+ L + ++ + +    +  D+   Q +   T +     M  GQ+L++ 
Sbjct: 124 KLYGNEAVILVGDFLFSKSYSLAA----EEPDHRFIQALTDCTTH-----MAEGQVLELL 174

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D  +   +   +   KT  L+  AC+ GAI A AS   +  L  +G +LG+ FQL D
Sbjct: 175 RTDDLELSRQKYLEVIVAKTAVLLAAACQMGAIHAGASPEVENALYRYGLSLGVAFQLVD 234

Query: 226 DLLD 229
           D LD
Sbjct: 235 DALD 238


>gi|296804410|ref|XP_002843057.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS
           113480]
 gi|238845659|gb|EEQ35321.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS
           113480]
          Length = 488

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   I+ 
Sbjct: 230 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIA- 286

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183
              +L+D    +L+ ++  N     ++ G+ + +++  +DE+          + +QK  +
Sbjct: 287 ---RLRDPEVIELLGTVMAN-----LVEGEFMQLKNTMLDESNPVWSEDIISYYLQKTYL 338

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K+ +L+  +C + A++  +     E    FG NLG+ FQL DD+LD
Sbjct: 339 KSASLISKSCRAAALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLD 384


>gi|114324644|gb|ABI63627.1| solanesyl diphosphate synthase [Solanum lycopersicum]
          Length = 398

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 23/226 (10%)

Query: 16  IDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68
            + + DDLL   +   ++    N  L+SA       GGK++R    FLV+   A +  + 
Sbjct: 80  FEVVADDLLTLNKNLHNIVGAENPVLMSAAEQIFGAGGKRVRPALVFLVSRATAEMSGLK 139

Query: 69  HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D    RRGK T+H  Y    A++AG+ +   
Sbjct: 140 ELTTNHRRLAEIIEMIHTASLIHDDV--LDESDTRRGKETIHQLYGTRVAVLAGDFMFAQ 197

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
           +   ++        N+ +  ++ L   + ++    G++    + F   +   +  +    
Sbjct: 198 SSWYLA--------NLENLEVIKLISQV-IKDFASGEIKQASNLFDCDVGLDEYLLKSYY 248

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  + +  AI +    +  E++  +G NLG+ FQ+ DD+LD
Sbjct: 249 KTASLIAASTKGAAIFSEVGSDISEQMFQYGRNLGLSFQIVDDILD 294


>gi|182412460|ref|YP_001817526.1| polyprenyl synthetase [Opitutus terrae PB90-1]
 gi|177839674|gb|ACB73926.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
          Length = 341

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 15/184 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK+IR  LV      +  N + A   +RV A +E +H  +L+HDD+  MD   +RR + T
Sbjct: 57  GKRIRPALVFLGG--WRGNGMVAPDLVRVAAVVELVHLATLVHDDI--MDGAEVRRNRRT 112

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
              ++    A++ G+ L  +A  + +  P T++   +       ++  I        Q L
Sbjct: 113 AAREFGAAGAVLLGDALFAHALHLAAQFPTTEVCAAVSESTRRVVSGEIV-------QTL 165

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                 +     F I  +KT  L   +C  GA +A ++    E +  FGE+LG+ +Q+ D
Sbjct: 166 RRGTTNVSRADYFRIIDLKTAELFRVSCFLGARLAGSAPGYVEAVSRFGEHLGVAYQIYD 225

Query: 226 DLLD 229
           DL D
Sbjct: 226 DLAD 229


>gi|261331244|emb|CBH14234.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 359

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 22/202 (10%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSM 95
           L++ + +AL+     + F  ++  SL ++   T    LR+G   E IH  +L+HDD+  +
Sbjct: 73  LVAMMAHALVPPHMSQQFQASDIGSLDDIPSGTIRPFLRLGEVTELIHTAALVHDDV--I 130

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152
           D+  +RRGKP +H  +D   A++AG+ LL  A   I+S   P+            + +  
Sbjct: 131 DDSEMRRGKPALHCVHDVKRAVLAGDFLLARASLWIASLCVPR------------IVVLM 178

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              L+ +  G+M+ ++  F D  +       KTG+L+  +  + A++A  S +  E    
Sbjct: 179 TTALEDLTRGEMMQMEGCF-DLERYEEKTYCKTGSLIANSLAATAVLADPSNSAHEVAAG 237

Query: 213 -FGENLGIIFQLADDLLDCEED 233
            +G  LGI FQ+ DD LD   D
Sbjct: 238 EYGRRLGIAFQIVDDCLDITGD 259


>gi|114049916|emb|CAK50933.1| putative geranylgeranyl diphosphate synthase [Streptomyces
           ambofaciens]
 gi|114050138|emb|CAK51171.1| putative geranylgeranyl diphosphate synthase [Streptomyces
           ambofaciens]
          Length = 357

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 30/239 (12%)

Query: 14  KRIDTILDDLLLQTA-SHMQTQHNDRLLSAIR-YALLGGKKIRSFL--VTECASLFNVNH 69
           +++D +L+D L   A +  +  H   + + +R +   GGK++R+ L  V   A+  + + 
Sbjct: 18  EQVDAVLEDFLEDKAGAAARRSHPPEVANTLRAFLAAGGKRVRALLCVVGWHAAGGSEDR 77

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------QYDEVTA 116
              LRV A++E    ++LIHDD+  MD+  +RRG+P VH              +     A
Sbjct: 78  AAVLRVAASLELFVAFALIHDDI--MDDSAVRRGRPAVHRALCTRLGQSSRAERLGAGGA 135

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFI 172
           ++ GN  L +A E++ +    L    R +  +   ++  L+ ++ GQ LD+     D+ I
Sbjct: 136 LLVGNLALIWAQELLHTADLPL----RRRRTVHALYDAMLEEVMYGQYLDVMGTGPDDDI 191

Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           D      I + KT  A +    + GA +A A           G  LG  FQ+ DDLLD 
Sbjct: 192 D--AALRIARYKTATATVERPLQLGAAVAGADDTTVNLCTALGLPLGEAFQIRDDLLDV 248


>gi|222834545|gb|EEE73022.1| predicted protein [Populus trichocarpa]
          Length = 309

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A  F+        + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPVILLLSARAFDYEGHRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++    +     +R   +LS   N+  +G +  Q+L++ 
Sbjct: 88  AVFGNAASVLVGDFLYSRAFQMMVEAGS-----MRIMEILSNATNVIAEGEVL-QLLNMH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + + KT  L   + + GA++A A    +E    +G  +G  FQL DD+L
Sbjct: 142 DPEVTVERYLQVIRYKTAKLFEASAQLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDML 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|148274072|ref|YP_001223633.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147832002|emb|CAN02974.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 340

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 31/204 (15%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  +V      L   +   A  VGAA E +H   ++HDD+  +D  + RRG P V
Sbjct: 36  GGKRFRPRMVMAAYDGLGGQDVQAAAHVGAAFEMLHTALIVHDDV--IDRDFTRRGGPNV 93

Query: 108 HIQYDEVT-----------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
              Y ++                  A+IAG+  L  A+ +I +  + ++D  RS LM  L
Sbjct: 94  SGAYRDIATTQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDA--SGVRDLTRSHLMEIL 151

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFAC--ESGAIMAHASQ 204
              +       G+++D++     +     ++  ++++KT A+  F    ++GA++A AS 
Sbjct: 152 DDAVFASA--AGELIDVEFSLTADVPSVDEILRMERLKT-AVYSFEAPLQAGAVLAGASP 208

Query: 205 NEKERLRCFGENLGIIFQLADDLL 228
                L  FG ++GI +Q+ DD+L
Sbjct: 209 AIVSALGDFGRDIGIAYQVVDDVL 232


>gi|29827670|ref|NP_822304.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29604770|dbj|BAC68839.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
           MA-4680]
          Length = 344

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 21/193 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A          +    A+E +H +SL+HDD+  MD   +RRG+P +  
Sbjct: 63  GKGVRQALAVLGAEAAGGPAEAGVPAAVAVELVHTFSLLHDDI--MDGDAMRRGRPALWK 120

Query: 110 QYDEVTAIIAGNGLLTYAFEII---SSP------KTQLKDNIRSQLMLSLTHNIGLQGML 160
            Y    A++AG+ L   A + +   S+P         L D +R Q             +L
Sbjct: 121 AYGTGPAVLAGDALFALAVQTLTTASAPGAAHRLSAALGDLVRGQA----------DDLL 170

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
                    E +   +   + + KTG+L+  A   GA +A A +     L   G +LG+ 
Sbjct: 171 FAHRPWTGPEAVSVAEYEAMAEHKTGSLLGCALALGAHLAGAPEETAAVLDRTGRHLGVA 230

Query: 221 FQLADDLLDCEED 233
           FQ+ DDLL    D
Sbjct: 231 FQIVDDLLGIWGD 243


>gi|157960679|ref|YP_001500713.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345]
 gi|157845679|gb|ABV86178.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345]
          Length = 323

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +    + L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSILAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+L+     +++   T+ +    +L  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELRSLDVLEILADATNVLAEGEVL--QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLADSPIEVQTALADYGKYLGTAFQLTDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|126465401|ref|YP_001040510.1| polyprenyl synthetase [Staphylothermus marinus F1]
 gi|126014224|gb|ABN69602.1| Polyprenyl synthetase [Staphylothermus marinus F1]
          Length = 365

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 43/223 (19%)

Query: 45  YALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           Y L GGK++R+FLV     +      N++ +  L  G  IE +  Y L+HDD+  MD   
Sbjct: 47  YTLRGGKRLRAFLVLIGYWSRKWGYGNIDSIKYLMAG--IEFLQSYLLVHDDI--MDEDE 102

Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYA---FEIISSPKTQLKD 140
           IRRG PTVH+ +D                   AII G+ L + A   F  ++ P   LK+
Sbjct: 103 IRRGGPTVHVWFDRKCREEGLISRCKHYGVSQAIIVGDYLESLAVSMFTRLNLPDYALKE 162

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC-FACE 194
            I+       T+  G++ +  GQ LD+       + + E  V+ I  +KT +        
Sbjct: 163 LIK-------TYTRGVRLVAYGQFLDVLIANTPLKKVSEDDVYNIHMLKTASYTVELPLH 215

Query: 195 SGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            GAI +    NE    L  +    GI FQL DD+L    D PK
Sbjct: 216 LGAIASLMYNNELLMELSQYALPAGIAFQLQDDILGLYGD-PK 257


>gi|86134465|ref|ZP_01053047.1| polyprenyl synthetase [Polaribacter sp. MED152]
 gi|85821328|gb|EAQ42475.1| polyprenyl synthetase [Polaribacter sp. MED152]
          Length = 325

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%)

Query: 39  LLSAIRYALL--GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           LL+ I Y ++   GK++R    FLV +  S    +  T  R  + +E IH  +L+HDD+ 
Sbjct: 32  LLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERT-YRGASVVELIHTATLVHDDV- 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D+   RRG  +++  +    A++ G+ LL+    ++S       DN    L+  ++  
Sbjct: 90  -VDDSNRRRGFFSINALWKNKIAVLVGDFLLSKGL-LLSI------DNEDFDLLKLIS-- 139

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           I ++ M  G++L I+      I E   F I + KT  L+   C  GA    A+Q+  +++
Sbjct: 140 IAVREMSEGELLQIEKARKLDITEDIYFDIIRQKTATLIAACCGIGAASVGANQDTVQQM 199

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           R FGE +GI FQ+ DDL D  ++
Sbjct: 200 RKFGEYIGIAFQIKDDLFDYSDE 222


>gi|125973083|ref|YP_001036993.1| trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC
           27405]
 gi|125713308|gb|ABN51800.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC
           27405]
          Length = 318

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LL+       +  +RLL+    +++  GGK++R   V   +     N    +   AAIE
Sbjct: 14  VLLEKFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVIPAAAAIE 73

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +LIHDD+  +D    RRG+ T+  ++    A+  G+ L T A  +++        
Sbjct: 74  ILHTATLIHDDV--VDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAG------- 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGA 197
           N+  + +  L    G++ +  G++   Q ++  +T V+   K    KT  L   AC  GA
Sbjct: 125 NVPEKRLSILAK--GIKAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLFSAACALGA 182

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDL-----LDCEEDLP 235
            +A   Q     L   G   G+ FQ+ DD+        EED P
Sbjct: 183 YIAKCPQEVSRSLVKLGLYYGMAFQIKDDINNYTKAQYEEDKP 225


>gi|297159526|gb|ADI09238.1| putative polyprenyl diphosphate synthase [Streptomyces
           bingchenggensis BCW-1]
          Length = 336

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVLLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVASAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L+  
Sbjct: 111 ARWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILETA 160

Query: 169 D--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              +  D  + ++ + + KTG+L+  +   GA+M+ A ++    L  +GE LGI FQLAD
Sbjct: 161 GPRDGQDPIEHYLDVLQGKTGSLVAVSGRFGAMMSGADESVVSILTQYGERLGIAFQLAD 220

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 221 DVLDIASD 228


>gi|58040424|ref|YP_192388.1| decaprenyl diphosphate synthase [Gluconobacter oxydans 621H]
 gi|58002838|gb|AAW61732.1| Decaprenyl diphosphate synthase [Gluconobacter oxydans 621H]
          Length = 315

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 18/192 (9%)

Query: 49  GGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           GGK++R  L    + L        N  H+    + A +E IH  +L+HDD+  +D   +R
Sbjct: 30  GGKRLRPLLTLASSRLCGYKSTPENQRHVG---LAACVEFIHTATLLHDDV--VDESNLR 84

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG  + +  +    +++ G+ L   +F+++++  +     I S    ++     LQ +  
Sbjct: 85  RGLASANAVFGNKASVLVGDFLFARSFQLMTADGSLKVMAILSDASATIAEGEVLQMVTQ 144

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             +    D +++      +   KT AL   AC  GA++A   + E+  L  FG NLG+ F
Sbjct: 145 NDLSTPVDRYLE------VIHGKTAALFAAACRVGAVVADRPEAEELALDRFGTNLGMAF 198

Query: 222 QLADDLLDCEED 233
           QL DD LD   D
Sbjct: 199 QLVDDALDYAAD 210


>gi|116327301|ref|YP_797021.1| geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332078|ref|YP_801796.1| geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120045|gb|ABJ78088.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125767|gb|ABJ77038.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 319

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 16/197 (8%)

Query: 38  RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ++LS I+   +  GGK++R  L      L   +    L VGA +E IH  SL+HDD+  +
Sbjct: 27  KILSEIKTYTIRSGGKRLRPILHYCLCQLLGYSGKHWLDVGAIVELIHAASLLHDDV--V 84

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTHN 153
           D    RRG+ +V  ++   TAI+AG+ LL    + ++        +I +Q++  LS++  
Sbjct: 85  DEAETRRGQQSVGSKFGNKTAILAGDYLLACGIDHLNDLGYPELMDIFTQVIKDLSISEL 144

Query: 154 IGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           I ++     ++ LDI ++         I   KT +L      S  I++  +  EK++LR 
Sbjct: 145 IQMEWEKNPKITLDIYNK---------IAYGKTSSLFGAVGVSAGILSDKNDKEKKKLRQ 195

Query: 213 FGENLGIIFQLADDLLD 229
           FG +LG  FQ  DD +D
Sbjct: 196 FGIDLGSFFQKKDDAID 212


>gi|300117458|ref|ZP_07055248.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1]
 gi|298725293|gb|EFI65945.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1]
          Length = 269

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 97/182 (53%), Gaps = 18/182 (9%)

Query: 62  ASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A  F    L A++ V  A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G
Sbjct: 4   AGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTG 61

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFM 179
           + L   + E I++ +         +   +L+H I    +  G++  I+D++  D+     
Sbjct: 62  DYLFAKSLECITNIEI-------PEAHQALSHTI--LEVCKGEIEQIKDKYNYDQNLRTY 112

Query: 180 IQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDL 234
           ++  K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ DD+LD    EE L
Sbjct: 113 LRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKL 172

Query: 235 PK 236
            K
Sbjct: 173 GK 174


>gi|237742642|ref|ZP_04573123.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
 gi|229430290|gb|EEO40502.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
          Length = 326

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L GK +RS L+  CA L   +  N     ++ A +E  H  SLIHDD+  +D+   RRGK
Sbjct: 40  LSGKMLRSKLLLLCAFLGSNWKDNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++  +Y +  A+ AG+ L+   F         L + +    +LS T      G +   +
Sbjct: 98  VSIQGKYGKDAAVFAGDFLIARIF--YYGAMENLNETVS---ILSKTVEYMCIGEIEQDL 152

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              Q + I E + F   + KT AL   A   GA     S+   ++L+ F +NLG++FQL 
Sbjct: 153 CRYQKD-ISEKKYFENIERKTAALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLK 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|37678653|ref|NP_933262.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
 gi|37197393|dbj|BAC93233.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
          Length = 306

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 26  GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 83

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   NI  +G +  Q+++  
Sbjct: 84  AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNIIAEGEVL-QLMNCN 137

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A    +  L+ +G+ LG  FQL DD++
Sbjct: 138 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 197

Query: 229 DCEED 233
           D   D
Sbjct: 198 DYTSD 202


>gi|154335826|ref|XP_001564149.1| polyprenyl synthase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061183|emb|CAM38205.1| putative polyprenyl synthase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 742

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 20/207 (9%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   +R  +  GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   
Sbjct: 433 DTLFRPVRSMIDRGGKSWRSLVLVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--Q 490

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+  VH++Y   TAI AG+      F    + + Q     ++  +  L  ++ 
Sbjct: 491 DNSMVRRGEKCVHVEYGVATAINAGSACY---FMAPRAARIQDLPPEKASRIYQLYFDVL 547

Query: 156 LQGMLGGQMLDIQD---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHA 202
           L G   GQ LDI           E  D + +F     I   KTG  +   C    ++  A
Sbjct: 548 LAGH-AGQGLDIYGLDYLMPKVIETGDVSTLFDALDAIHTYKTGGAVGTLCAMACVLCEA 606

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229
                E +  FG  LG+ FQ+ DD L+
Sbjct: 607 PAALSEAVEKFGLTLGLAFQIVDDALN 633


>gi|313680555|ref|YP_004058294.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977]
 gi|313153270|gb|ADR37121.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977]
          Length = 319

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 20/226 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTECASLF 65
           S L E  +  +  L  LL      +Q   +D L++A      GGK+IR  L +    +L 
Sbjct: 8   SALPEPGEAFERRLRALLRSDVEFIQLIEDD-LIAA------GGKRIRPRLALLASRALG 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V H   + +  A+E +H  +L+HDDL  +D+   RRG+     +Y    ++++G+ LL+
Sbjct: 61  GVPH--EMELALAVELLHSATLLHDDL--VDDAETRRGREAAFRKYGNAVSVLSGDYLLS 116

Query: 126 YA-FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
              F +  + + +L       L       +    +L  Q    Q+    E Q + I + K
Sbjct: 117 RVLFLLAETGRIEL-----VHLFAEAARQLAEGEVLQFQAAAYQE--YSEAQYYRIIESK 169

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           T ALM  A E  A++  A +  +  L  +G   G+ FQ+ DD LD 
Sbjct: 170 TAALMRAATEGAALLGRAPETLRMALVTYGREYGMAFQMRDDYLDL 215


>gi|260910759|ref|ZP_05917413.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260635120|gb|EEX53156.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 325

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+      F      A      +E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  GGKRMRPILILLMTKSFGKVTPVAQYAAVGLELLHTASLVHDDV--VDESGERRGQASVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLD 166
             Y+   A++ G+ +L+ A  +++  +T   D +   ++L  +L++   LQ      + +
Sbjct: 102 ASYNNKVAVLVGDYILSTA--LLNIARTDDCDIVCDLAELGRTLSNGEILQ------LTN 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           I +    E   F + + KT AL       GA    A +   E  R FG N+GIIFQ+ DD
Sbjct: 154 IVNTNFSEEVYFEVIRQKTAALFESCAVIGAKAGGADKQAVEAARAFGRNVGIIFQIRDD 213

Query: 227 LLD 229
           + D
Sbjct: 214 IFD 216


>gi|295835333|ref|ZP_06822266.1| polyprenyl synthetase [Streptomyces sp. SPB74]
 gi|197696404|gb|EDY43337.1| polyprenyl synthetase [Streptomyces sp. SPB74]
          Length = 390

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 14/192 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           G ++ R  LV     L   +      + AAIE  H  SL+ DD+   D   +RRG P  H
Sbjct: 88  GRRRWRPGLVAAAIDLLGGDSEHYGPLCAAIELAHTGSLMVDDV--QDGSPLRRGSPAAH 145

Query: 109 IQYDEVTAIIAGNGLLTYAFE----IISSPKTQLKDNIRSQLMLSLTHNIGLQGM-LGGQ 163
           + +   TA+ AG     +AF+    + ++    L   +R   + +L      QG+ + G 
Sbjct: 146 LVFGTATALNAGTHAY-FAFDRAVRLTAAHDPALAGRLRDVFLAALRSAHAGQGLDITGH 204

Query: 164 MLDIQDEFI--DETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
             ++ +     D   V     +  ++KTGA+    CE+ A++  A    +  L  FGE L
Sbjct: 205 RAEMAEAVATGDARHVLALVRLTHRLKTGAMAALGCETAALVTAADGPRRRALAAFGEAL 264

Query: 218 GIIFQLADDLLD 229
           G  +Q  DD+ D
Sbjct: 265 GTAYQFTDDVAD 276


>gi|331699298|ref|YP_004335537.1| trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953987|gb|AEA27684.1| Trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 331

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A +  N ++   +   A +E +H  +L HDD+  MD+  +RRG  + 
Sbjct: 53  GGKRFRPLFTLLSAQVGPNPDNDDVITAAAVVELVHLATLYHDDV--MDSATMRRGAESA 110

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++D   AI+ G+ L  +A  +++       D +R   +++ T       ++ GQM + 
Sbjct: 111 NSRWDNTVAILTGDFLFAHASRLVADLG---PDAVR---IIAET----FAELVTGQMRET 160

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   E  D  + ++ +   KTG+L+  +   G + +  +  + E LR FG  +G  FQ++
Sbjct: 161 RGPAEGDDPVEHYLRVVAEKTGSLIATSGRYGGMFSGCTPEQTESLRRFGATIGTAFQIS 220

Query: 225 DDLLD 229
           DD++D
Sbjct: 221 DDVID 225


>gi|325295651|ref|YP_004282165.1| trans-hexaprenyltranstransferase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066099|gb|ADY74106.1| Trans-hexaprenyltranstransferase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 324

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L      L        + V   +E +H  +L+HDD+  +D   +RRG+ + +
Sbjct: 43  GGKRVRPGLTIISGKLVEAPLERLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRLSAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ +   A  I++         + +Q +         Q M  G++L ++
Sbjct: 101 EVFGNDVAVLVGDYMFAKAIYILAVYGGDKVLKVAAQTV---------QEMAEGELLQLE 151

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D  + E + F I   KT +L+   CE G I+  A + E++ L+ +G+ +G  FQL D
Sbjct: 152 KIGDINLTEEEYFDIIYRKTASLLSTCCEVGGIVGEAREEERKALKNYGKFIGYAFQLVD 211

Query: 226 DLLD 229
           D  D
Sbjct: 212 DAFD 215


>gi|291294791|ref|YP_003506189.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279]
 gi|290469750|gb|ADD27169.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279]
          Length = 319

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 33/193 (17%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  LV   + +L  V +  A+ +  A+E +H  SL+HDDL  +D+   RRGK   
Sbjct: 43  GGKRVRPRLVFLASNALGGVPY--AMELALAVELLHSASLLHDDL--VDDAETRRGKEAA 98

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +Y    ++++G+ LL+                 R   +L+ T  + L  M       +
Sbjct: 99  FRKYGNAVSVLSGDYLLS-----------------RLMALLAQTGRMELVAMFAETARQL 141

Query: 168 QDEFIDETQVFMIQKM-----------KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            +  + + QV  +              KT ++M  ACE  A++  A   E+E L  FG  
Sbjct: 142 SEAEVLQFQVAALHDYSLENYERIIDGKTASVMRVACEGAAVLGDAPPAEREALARFGSF 201

Query: 217 LGIIFQLADDLLD 229
            G  FQ+ DD LD
Sbjct: 202 YGQAFQMRDDYLD 214


>gi|261250197|ref|ZP_05942773.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           orientalis CIP 102891]
 gi|260939313|gb|EEX95299.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           orientalis CIP 102891]
          Length = 345

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 10/206 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q   +  L++ + + ++  GGK+IR  L    A              A IE IH  +L
Sbjct: 44  HAQLNSDVSLINQLGFYIVSGGGKRIRPLLAVLSARALGYQGEAHTTSAAFIEFIHTATL 103

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   +
Sbjct: 104 LHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SLKILKL 156

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  +    E     +   KT  L   A + GAI+  A ++ +
Sbjct: 157 MSDAVNVIAEGEVQ-QLMNCNNPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPEDVE 215

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L+ +G+ LG  FQL DD++D   D
Sbjct: 216 LALQNYGKYLGTAFQLIDDVMDYTSD 241


>gi|315127756|ref|YP_004069759.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas sp.
           SM9913]
 gi|315016270|gb|ADT69608.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas sp.
           SM9913]
          Length = 323

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          + +   IE IH  +L+HDD+  +D   +RRG PT +
Sbjct: 43  GGKRVRPMLAILAAKALGYQGKDHITLATIIEFIHTATLLHDDV--VDESNLRRGTPTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            ++    +++ G+ + T +F++ +   K Q+      Q++   T+ I    +L  Q+++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQLMVGLGKMQIM-----QVLADATNIIAEGEVL--QLMNC 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     +   KT  L   A    AI+     +  E L  +G +LG  FQL DD+
Sbjct: 154 NDPDTTEASYMQVIYSKTAKLFEAATGLAAIITDQDDSVLEALNLYGMHLGTAFQLVDDV 213

Query: 228 LDCEED 233
           LD   D
Sbjct: 214 LDYNAD 219


>gi|327274790|ref|XP_003222159.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Anolis
           carolinensis]
          Length = 350

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 24/200 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N +H ++  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 68  GKAFRPMIVVLMARACNFHHKSSGEVQASQRSIALIAEMIHTASLVHDDV--IDDANSRR 125

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L  A + ++         I +  ++S+     ++ ++ G
Sbjct: 126 GKLTVNHVWGERKAVLAGDFILAVASQTLA--------RIGNTTIVSVLTR-AIEDLVRG 176

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +I+A       E    +G+N+GI
Sbjct: 177 EFLQLGSKENENERFAHYLEKTFKKTASLIAHSCKAVSILACPDPKVHEIAYQYGKNIGI 236

Query: 220 IFQLADDLLD---CEEDLPK 236
            FQL DD+LD   C E L K
Sbjct: 237 AFQLIDDVLDFTSCSEQLGK 256


>gi|227530643|ref|ZP_03960692.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC
           49540]
 gi|227349424|gb|EEJ39715.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC
           49540]
          Length = 325

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 16/203 (7%)

Query: 33  TQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLI 88
           T +N  L +A++  A  GGK +R       A L   N   +   +++ +++E +H  +LI
Sbjct: 28  TVNNTDLQAALKQMASKGGKYLRPAFCLTFARLGGKNSWNSSKLIKIASSLEILHMATLI 87

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D+   RRG P++   + + TA+ +G+ L T  F++       L + + S   L
Sbjct: 88  HDDV--IDDSPERRGAPSIQKAFGKDTAVYSGDLLFTVFFDL-------LVETMESSPYL 138

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNE 206
           + T+   ++ +L G++  +   +  ++ +   + +  KT  L   A + GA    A    
Sbjct: 139 A-TNAQAMRKILAGELGQMNQRYQQQSLLEYYRNINGKTATLFSLAAQEGAHFGGADART 197

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
               +  G+N+GI FQ+ DD+LD
Sbjct: 198 VHLAKHIGQNIGITFQILDDMLD 220


>gi|256004586|ref|ZP_05429564.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM
           2360]
 gi|281417278|ref|ZP_06248298.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20]
 gi|255991458|gb|EEU01562.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM
           2360]
 gi|281408680|gb|EFB38938.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20]
 gi|316940696|gb|ADU74730.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
          Length = 318

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LL+       +  +RLL+    +++  GGK++R   V   +     N    +   AAIE
Sbjct: 14  VLLEEFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKVIPAAAAIE 73

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +LIHDD+  +D    RRG+ T+  ++    A+  G+ L T A  +++        
Sbjct: 74  ILHTATLIHDDV--VDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLAG------- 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGA 197
           N+  + +  L    G++ +  G++   Q ++  +T V+   K    KT  L   AC  GA
Sbjct: 125 NVPEKRLSILAK--GIKAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLFSAACALGA 182

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDL-----LDCEEDLP 235
            +A   Q     L   G   G+ FQ+ DD+        EED P
Sbjct: 183 YIAKCPQEVSRSLVKLGLYYGMAFQIKDDINNYTKAQYEEDKP 225


>gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
           lycopersicum]
          Length = 206

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 42  AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++RY+LL GGK+IR  L      L      TA+    A+E IH  SLIHDDLP MDN  +
Sbjct: 99  SMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL 158

Query: 101 RRGKPTVHIQYDE 113
           RRGKPT H  Y E
Sbjct: 159 RRGKPTNHKIYGE 171


>gi|239945641|ref|ZP_04697578.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 15998]
 gi|239992111|ref|ZP_04712775.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 11379]
          Length = 356

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 65  GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A++++    T        +L          + ++ GQ  DI 
Sbjct: 123 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRL------TTATRKLIDGQAQDIS 176

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 177 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVD 236

Query: 226 DLL 228
           DLL
Sbjct: 237 DLL 239


>gi|225011597|ref|ZP_03702035.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004100|gb|EEG42072.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A]
          Length = 325

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 36/195 (18%)

Query: 50  GKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R   V   A L     VN  T  R  + IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 45  GKQMRPMFVFLVAKLVGNGKVNERT-YRGASVIELIHTATLVHDDV--VDDSNKRRGFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---------NIGLQ 157
           ++  +    A++ G+ LL+                    L+LS+ +         ++ ++
Sbjct: 102 INALWKNKIAVLVGDYLLSKG------------------LLLSIENEDFDLLKIISVAVR 143

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            M  G++L I+      I ET  + I + KT  L+   C  GA   +A+  E E++  FG
Sbjct: 144 EMSQGELLQIEKARNLDITETIYYEIIRQKTATLLASCCALGAQSVNATVEEVEKMHHFG 203

Query: 215 ENLGIIFQLADDLLD 229
           E LG+ FQ+ DDL D
Sbjct: 204 EVLGMAFQIKDDLFD 218


>gi|110597409|ref|ZP_01385696.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM
           13031]
 gi|110340953|gb|EAT59424.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM
           13031]
          Length = 324

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 33/206 (16%)

Query: 44  RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L   GK+IR  LV   A L    + ++ R    +E +H  +LIHDD+  +D   +RR
Sbjct: 37  RYVLKQQGKQIRPALVLLSAQLCGGVNESSYRAAIMVELLHSATLIHDDV--VDGAEMRR 94

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---------N 153
           G  +++  +    +++ G+ LL+                    L+ SL H         +
Sbjct: 95  GLASINALWKNKISVLIGDYLLSRG------------------LLYSLEHKDYGFLHMVS 136

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             ++ M  G++L IQ      I E     +   KT +L+  AC  GA+ +   ++    L
Sbjct: 137 EAVRRMSEGEILQIQKTRSLDISEEDYLSVISDKTASLISSACAMGAMSSTTDESAIASL 196

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
           + +GE LG+ FQ+ DDLLD   D  K
Sbjct: 197 KSYGEYLGLAFQIRDDLLDYTGDSKK 222


>gi|260585122|ref|ZP_05852863.1| heptaprenyl diphosphate synthase component II [Granulicatella
           elegans ATCC 700633]
 gi|260157210|gb|EEW92285.1| heptaprenyl diphosphate synthase component II [Granulicatella
           elegans ATCC 700633]
          Length = 325

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 103/187 (55%), Gaps = 16/187 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK IR   +T  A+  N  +   +R V AA+E +H  +L+HDD+  +D   +RRG+ T+
Sbjct: 47  GGKMIRPAYLTLFANWSNNGNPQQVRAVAAALELLHVATLLHDDV--IDEADMRRGQETL 104

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +Y    AI AG+ +LT  ++++S+  + L+        ++L  N G+  ++ G++  +
Sbjct: 105 NARYGNRVAIYAGDFVLTSCYQLLSTHLSDLEG-------ITLPTN-GMARVVEGELAQM 156

Query: 168 QDEFIDE--TQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++ +  +   Q ++ + + KT  L   +C  GA +     ++  R +  G+ +G+ FQ+ 
Sbjct: 157 RNRYRYDLGLQEYLKRIEGKTAQLFMVSCYMGAKLGQM--DDALRAKKIGQQIGMAFQIL 214

Query: 225 DDLLDCE 231
           DD+LD +
Sbjct: 215 DDILDYQ 221


>gi|315640540|ref|ZP_07895648.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus
           DSM 15952]
 gi|315483744|gb|EFU74232.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus
           DSM 15952]
          Length = 326

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 16/193 (8%)

Query: 43  IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + ++  GGK +R    FL  E       N    ++V ++IE +H  +LIHDD+  +D+  
Sbjct: 38  VEFSQAGGKYLRPAFFFLFAELGDPKKQNEEELIKVASSIELLHMATLIHDDI--IDDSP 95

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG  TV   Y +  A+  G+ L T  FE+       L D +     ++ T+   ++G+
Sbjct: 96  LRRGTLTVQAHYGKDIAVYTGDLLFTLFFEV-------LIDVMNGSPFMA-TNAQAMKGL 147

Query: 160 LGGQMLDIQDEF-IDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++  +   + +++T     +    KT  L   AC  GA     S   +      G N
Sbjct: 148 LLGELDQMNLRYNVNQTIDDYLLSVNGKTAELFWLACLEGAHFGKTSPQIEALAGEIGRN 207

Query: 217 LGIIFQLADDLLD 229
           +GI FQ  DD+LD
Sbjct: 208 IGIAFQAYDDILD 220


>gi|227549792|ref|ZP_03979841.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227078047|gb|EEI16010.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 338

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 21/194 (10%)

Query: 46  ALLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           AL GGK+ R  +   C+    +     A++     E +H  +L HDD+  MD   +RRG 
Sbjct: 56  ALAGGKRFRPLVALLCSEFGPHPGSDNAVKGAVITELVHLATLYHDDV--MDEADMRRGV 113

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ----LKDNIRSQLMLSLTHNIGLQGML 160
            + + +++   AI+AG+ L ++A  ++S   T+      D     +   +  ++G +G  
Sbjct: 114 ESANARWNNTVAILAGDILFSHASLMMSEIDTETVRHFADTFGQLVTGQMRESVGARGG- 172

Query: 161 GGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                       D  Q ++ + + KT  L+  A   G++ A AS +   R    GE +G+
Sbjct: 173 ------------DPVQHYLTVIREKTAVLIASAAHLGSLHAGASADVVTRCETIGEAIGM 220

Query: 220 IFQLADDLLDCEED 233
           IFQ+ DD++D   D
Sbjct: 221 IFQIVDDIIDIFSD 234


>gi|241668473|ref|ZP_04756051.1| polyprenyl synthetase family protein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877007|ref|ZP_05249717.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843028|gb|EET21442.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 325

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +   N      L   A IE IH  +L+HDD+  +D+ ++RRGK T +
Sbjct: 44  GGKRLRPLLVMLFSRALNYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++        DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVGL-----DNMKIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE---KERLRCFGENLGIIFQLA 224
           ++  + E     +   KT  L   ACE   +++   Q+    +  ++ +G  LG  FQ+A
Sbjct: 155 RNIELSEEDYTNVIYCKTAKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|332799448|ref|YP_004460947.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1]
 gi|332697183|gb|AEE91640.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1]
          Length = 326

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A     +      +  ++E IH  ++IHDD+  +D+  IRRG  ++ 
Sbjct: 47  GGKRLRPAMLLAAARFGEYDFEIVRPLALSVELIHTATIIHDDI--VDDSPIRRGVLSIQ 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q  +  A+ AG+ +    FEI+++       NI  Q+  +++     +      + D  
Sbjct: 105 SQLGKDVAVYAGDYIFCKVFEILAASTYS---NILEQVSKAMSQICEGELKQREDLFDTD 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             F D   ++ IQK KT  L   + + GA ++ A     + L  +G N+G+ FQ+ DDLL
Sbjct: 162 LTFKD--YLYRIQK-KTAILFALSAQMGADVSKAPDKIIKALYSYGINIGMAFQIIDDLL 218

Query: 229 DCEEDLPK 236
           D   D  K
Sbjct: 219 DFTGDYKK 226


>gi|169629079|ref|YP_001702728.1| polyprenyl synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169241046|emb|CAM62074.1| Probable polyprenyl synthetase [Mycobacterium abscessus]
          Length = 314

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 39/218 (17%)

Query: 47  LLGGKKIRSFL-------VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           L GGK++R          +T+    +N      LRV AA+E +H  +LIHDD+  +D+  
Sbjct: 2   LRGGKRLRPAFAYWGWRAITDDPDPWNPE---VLRVCAALELLHTCALIHDDV--IDSSA 56

Query: 100 IRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG+PT+H+++  +                 AI+ G+  LT+A +++   +   + ++R
Sbjct: 57  TRRGEPTIHVEFAALHRENGWSGSPEQFGISAAILLGDLALTWADDMVVGAQLSPEAHVR 116

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAI 198
           ++ + S+  +     +LGGQ LDI      DE + ET + +I+    G  +    + G  
Sbjct: 117 ARGVWSILRS----EVLGGQYLDILSESSGDESV-ETALRVIRFKTAGYTVQRPLQLGVA 171

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +A  +      L   G ++GI FQL DD+L    D PK
Sbjct: 172 IAGENAEISRLLGDVGLDIGIAFQLRDDVLGVFGD-PK 208


>gi|119509566|ref|ZP_01628713.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
 gi|119465755|gb|EAW46645.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
          Length = 323

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L++    L     L   R+    E IH  SL+HDD+  +D   +RRG P
Sbjct: 44  GGKRIRPAIVLLISRATMLEEDITLRHRRLAEITEMIHTASLVHDDV--VDESQMRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH  +    A++AG+ L   +   +++        + S++++ L      QG      +
Sbjct: 102 TVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLATGEIQQG------I 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  I           KT +L+  + ++ A+++ AS    E L  +G +LG+ FQ+ D
Sbjct: 156 NCFDNGISIETYLKKSYYKTASLIANSSKAAALLSDASPETAENLYDYGRHLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|260773626|ref|ZP_05882542.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           metschnikovii CIP 69.14]
 gi|260612765|gb|EEX37968.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           metschnikovii CIP 69.14]
          Length = 323

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSAKALGYQGEGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S + NI  +G +  Q+++  
Sbjct: 101 ATFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKLMSHSVNIIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GA++  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPETTEESYMQVIYSKTARLFEAATQIGAMLCDASPEVERAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|224536943|ref|ZP_03677482.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521430|gb|EEF90535.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 324

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 16/184 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L+   A L+      +L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILLLLVAKLYGRICPESLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y+   A++ G+ LL  A  ++   KT       +  ++ +   +G Q +  G++L + +
Sbjct: 103 IYNNKVAVLVGDYLLATA--LVQVGKTH------NYAIIDVVSRLG-QNLSEGELLQLSN 153

Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               +F +E    +I+K KT  L     +SGA+    +  + E  R FGE +G+ FQ+ D
Sbjct: 154 VSNLQFSEEIYFDVIRK-KTAVLFAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIKD 212

Query: 226 DLLD 229
           D+ D
Sbjct: 213 DIFD 216


>gi|213962477|ref|ZP_03390739.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
 gi|213954803|gb|EEB66123.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
          Length = 327

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)

Query: 39  LLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLP 93
           LL+ I Y ++   GK++R   V   A + + +   + R     + IE IH  +L+HDD+ 
Sbjct: 32  LLNRITYYIVNRKGKQMRPMFVFLVAKMLSDDSKVSERTYRGASVIELIHTATLVHDDV- 90

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D+   RRG  +++  +    A++ G+ LL+    ++S       DN    L+  ++  
Sbjct: 91  -VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS-- 140

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KER 209
           + ++ M  G++L I+      I E   + I + KT  L+   C  GA      Q E  E+
Sbjct: 141 VAVREMSEGELLQIEKARRLDIVEDVYYEIIRQKTATLIAACCAMGACSVQPEQPELIEK 200

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +R FGE +G+ FQ+ DDL D  ED
Sbjct: 201 MRLFGEYIGMAFQIKDDLFDYTED 224


>gi|148242258|ref|YP_001227415.1| prenyl transferase [Synechococcus sp. RCC307]
 gi|147850568|emb|CAK28062.1| Prenyl transferase [Synechococcus sp. RCC307]
          Length = 323

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 23/190 (12%)

Query: 49  GGKKIRSFLVT------ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R  +V       + A   ++ H    R+    E IH  SL+HDD+  +D    RR
Sbjct: 44  GGKRLRPGIVLLLSRALDPAGELSLRHR---RLAQITEMIHTASLVHDDV--VDEANTRR 98

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML-- 160
           G PTVH +++   A++AG+ L   +   +++        + S++++ L      QG+   
Sbjct: 99  GVPTVHSRFNSRVAVLAGDFLFAQSSWHLANLDDLEVVKLLSRVIMDLAEGEIRQGLFRY 158

Query: 161 -GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             GQ L+    +++++        KT +L+  + ++  +++   +++  +L  FG  LG+
Sbjct: 159 DTGQSLET---YLEKS------YWKTASLIANSAKAAGVLSELERDQLNQLHSFGRQLGL 209

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 210 AFQIVDDILD 219


>gi|257064654|ref|YP_003144326.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
           DSM 20476]
 gi|256792307|gb|ACV22977.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
           DSM 20476]
          Length = 364

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 13/196 (6%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y+  GGK+ R  +     +    +   AL   AAIE  H  +LIHDD+   D   +RRG+
Sbjct: 71  YSKNGGKRHRPLICLAACAAVGGDVRKALSSAAAIEHFHTAALIHDDIA--DEATLRRGE 128

Query: 105 PTVHIQYDEVTAIIAGN-GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           P +H+ Y    AI  G+ GL      ++  P   L D+ + +++  L      +  + GQ
Sbjct: 129 PCLHLTYGMGLAINMGDLGLSLVNGTVMKDPA--LDDHTKVRVVTELIEMT--RRTIEGQ 184

Query: 164 MLDI---QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            +DI   +DE  D   E  + M                GAI+  A++   E LR +G + 
Sbjct: 185 AMDIGWARDERYDISPENYLIMATHKTAHYSGAVPLAIGAIVGGATEGAIEALRNYGLDT 244

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DDLL+ E D
Sbjct: 245 GLAFQIQDDLLNIEGD 260


>gi|297170662|gb|ADI21686.1| geranylgeranyl pyrophosphate synthase [uncultured
           Verrucomicrobiales bacterium HF0130_14P10]
          Length = 344

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 13/211 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
            D  LL  A+H      D  + A+     GGK+IR  LV  C           L+  + +
Sbjct: 31  FDTYLLGRANHFDPAVRDLAVQALAS---GGKRIRPALVHACGIGNLAVSENLLKASSIV 87

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +L+HDD+  +D+  IRR + TV+       AI+ G+ L  +A E+ S    + +
Sbjct: 88  EFVHVATLVHDDV--LDDASIRRDRQTVYADRGATAAILLGDALFAHALEMAS----EFQ 141

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            N   + + + T      G +    L   D  +  ++  +I + KT  L   +C  GA +
Sbjct: 142 GNEVCRWVAAATRRT-CSGEIQQSFLR-GDFTLTSSRYKLIIEAKTAELFTVSCRLGAHV 199

Query: 200 AHASQNEKERLRC-FGENLGIIFQLADDLLD 229
           A    N    L C FG  LG+ +Q+ DDL+D
Sbjct: 200 A-GLDNATSALACEFGRRLGLAYQIYDDLVD 229


>gi|291449099|ref|ZP_06588489.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291352046|gb|EFE78950.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 367

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 76  GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A++++    T        +L          + ++ GQ  DI 
Sbjct: 134 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRL------TTATRKLIDGQAQDIS 187

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 188 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVD 247

Query: 226 DLL 228
           DLL
Sbjct: 248 DLL 250


>gi|237743842|ref|ZP_04574323.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           7_1]
 gi|229432873|gb|EEO43085.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           7_1]
          Length = 326

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L GK  RS L+  CA L   +  N     ++ A +E  H  SLIHDD+  +D+   RRGK
Sbjct: 40  LSGKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++  +Y +  A+ AG+ L+   F         L + +    +LS T      G +   +
Sbjct: 98  VSIQGKYGKDAAVFAGDFLMARIF--YYGAVENLNEAVS---ILSKTVEYMCIGEIEQDL 152

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              Q++ I E + F   + KT AL   A   GA  +  S+   ++L  F +NLG++FQL 
Sbjct: 153 CRYQED-ISEKKYFKNIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLK 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|41409944|ref|NP_962780.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398777|gb|AAS06396.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 394

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 24/202 (11%)

Query: 45  YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           Y L GGK +R  L +  C  L    HL A L   A +E  H   LIHDD+   D  + RR
Sbjct: 54  YPLRGGKALRPALSIATCLGLGG--HLEAILPTAATLELYHNAFLIHDDI--EDESWWRR 109

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGM-- 159
           GKPT+HI Y    A+  G+ +L+ + +        L DN+ R  L  +L     +  M  
Sbjct: 110 GKPTLHIDYGVPVAVNVGDAMLSLSLQ-------PLLDNVERVGLGPALRILRAVATMTR 162

Query: 160 --LGGQMLDI-----QDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLR 211
             + GQ L++         +D+     + ++KT         ++G + A A+ +    L 
Sbjct: 163 KTVDGQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGTVAAGATPDRMAPLE 222

Query: 212 CFGENLGIIFQLADDLLDCEED 233
             G +LG  FQ+ DDLL+   D
Sbjct: 223 SLGRHLGAAFQITDDLLNLRAD 244


>gi|320157514|ref|YP_004189893.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio vulnificus MO6-24/O]
 gi|319932826|gb|ADV87690.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase [Vibrio
           vulnificus MO6-24/O]
          Length = 323

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   NI  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNIIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A    +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|289579302|ref|YP_003477929.1| trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9]
 gi|289529015|gb|ADD03367.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9]
          Length = 322

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK +R   V         +    L + AAIE +H  +L+HDD+  +DN  IRR KPT+ 
Sbjct: 44  SGKMLRPAFVILAGKFGEYDREKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQ 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLD 166
            +Y +  A+  G+ L + +F ++S       DNI    +  ++  +    +G + GQ   
Sbjct: 102 AEYGKDYAVFIGDFLFSESFLLLS-------DNITVSNLKKVSKVVSKICKGEI-GQFES 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             + +I           KT AL   +   GA  +   ++  + L   G N+G+ FQ+ DD
Sbjct: 154 RHNIYITINDYLRRIAAKTAALFALSFYVGAYESKCDESLAKALGSIGYNIGMAFQIIDD 213

Query: 227 LLD 229
           +LD
Sbjct: 214 ILD 216


>gi|308813211|ref|XP_003083912.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri]
 gi|116055794|emb|CAL57879.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri]
          Length = 374

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 21/199 (10%)

Query: 49  GGKKIRS---FLVTECASL-FNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV    ++  N++ +T    R+    E IH  SL+HDD+  +D+   RR
Sbjct: 93  GGKRLRPVLVFLVARATAIKMNMSDITDRQRRLAEITEMIHTASLVHDDV--LDDCDTRR 150

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLG 161
           GK T+H  Y    AI+AG+ L   +   +++        + SQ++       I   G L 
Sbjct: 151 GKETIHTLYGARVAILAGDFLFAQSSWFLANLDNLEVIKLISQVIADFADGEISQAGALF 210

Query: 162 GQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
               DI  DE+++++        KT +L+  +C+S ++ +   ++ K  +  +G++LG+ 
Sbjct: 211 N--CDITLDEYMEKSH------NKTASLIAASCKSASVFSECEESVKIDMYEYGKHLGLA 262

Query: 221 FQLADDLLD---CEEDLPK 236
           FQ+ DD+LD    EE L K
Sbjct: 263 FQVVDDILDFTQSEEQLGK 281


>gi|294784835|ref|ZP_06750123.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_27]
 gi|294486549|gb|EFG33911.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_27]
          Length = 326

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L GK +RS L+  CA L   +  +     ++ A +E  H  SLIHDD+  +D+   RRGK
Sbjct: 40  LSGKMLRSKLLLLCAFLGSNWKDHKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++  +Y +  A+ AG+ L+   F         L + +    +LS T      G +   +
Sbjct: 98  VSIQGKYGKDAAVFAGDFLIARIF--YYGAMENLNEAVS---ILSKTVEYMCIGEIEQDL 152

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              Q++ I E + F   + KT AL   A   GA  A  S+   ++L+ F +NLG++FQL 
Sbjct: 153 CRYQED-ISEKKYFENIERKTAALFQAASYIGAKEAGCSEEIIQKLKLFVKNLGLMFQLK 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|149927152|ref|ZP_01915409.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Limnobacter sp. MED105]
 gi|149824091|gb|EDM83312.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Limnobacter sp. MED105]
          Length = 330

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  LV   A             + + A +E IH  +L+HDD+  +D   +RRG+ 
Sbjct: 48  GGKRLRPALVILTARALGATQQQMQQTIELAAIVEFIHTATLLHDDV--VDESDMRRGRL 105

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T + +Y    A++ G+ L + +F+++   K  L D +   ++   T+ I    +L  Q+L
Sbjct: 106 TANAEYGNSAAVLVGDFLYSRSFQMMV--KIGLMDVM--DVLSEATNTIAEGEVL--QLL 159

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + +D  + E +   +   KT  L   +C    I+   S+     L  FG  +G  FQL D
Sbjct: 160 NCKDPDVTEARYMQVIDFKTAKLFEASCRLAGIVTGQSKEAITNLGRFGAEVGSAFQLID 219

Query: 226 DLLD 229
           D+LD
Sbjct: 220 DVLD 223


>gi|326423749|ref|NP_759657.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
 gi|319999111|gb|AAO09184.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
          Length = 333

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 53  GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   NI  +G +  Q+++  
Sbjct: 111 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNIIAEGEVL-QLMNCN 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A    +  L+ +G+ LG  FQL DD++
Sbjct: 165 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 224

Query: 229 DCEED 233
           D   D
Sbjct: 225 DYTSD 229


>gi|295135349|ref|YP_003586025.1| polyprenyl synthetase [Zunongwangia profunda SM-A87]
 gi|294983364|gb|ADF53829.1| polyprenyl synthetase [Zunongwangia profunda SM-A87]
          Length = 311

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 36/199 (18%)

Query: 50  GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R    FLV +  S   VN  T  R  + IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 31  GKQMRPMFVFLVAKMVSDGKVNERT-YRGASVIELIHTATLVHDDV--VDDSNRRRGFFS 87

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157
           ++  +    A++ G+ LL+                    L+LS+ +N         + ++
Sbjct: 88  INALWKNKIAVLVGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVR 129

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            M  G++L I+      I E   + I + KT  L+   C  GA        + E +R FG
Sbjct: 130 EMSEGELLQIEKARRLDITEEVYYDIIRQKTATLIAACCSLGAASVKPDSGDVENMRRFG 189

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G+ FQ+ DDL D  E+
Sbjct: 190 ELIGMAFQIKDDLFDYGEE 208


>gi|282901404|ref|ZP_06309329.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281193683|gb|EFA68655.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 323

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L++   +L     L   R+    E IH  SL+HDD+  +D   IRRG P
Sbjct: 44  GGKRIRPAIVLLISRATTLEEDISLGHRRLAEITEMIHTASLVHDDV--VDESDIRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH  +    A++AG+ L   +   +++        + S++++ L      QG      L
Sbjct: 102 TVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLAAGEIQQG------L 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  +           KT +L+  + ++  I+++ S      L  +G++LG+ FQ+ D
Sbjct: 156 NRFDTNLSIETYLKKSYYKTASLIANSAKAAGILSNVSSESANNLYNYGKDLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|90200410|gb|ABD92707.1| solanesyl diphosphate synthase [Hevea brasiliensis]
          Length = 418

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A +  +  LT    R+   IE IH  SLIHDD+  +D   +RR
Sbjct: 136 GGKRMRPALVFLVSRATAEIVGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESNMRR 193

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TVH  Y    A++AG+ +   +   ++        N+ +  ++ L   + ++    G
Sbjct: 194 GKQTVHQLYGTRVAVLAGDFMFAQSSWYLA--------NLENIEVIKLISQV-IKDFASG 244

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F   ++  +  +    KT +L+  + +  AI +    +  E++  +G+NLG+
Sbjct: 245 EIKQASSLFDCDVELEEYLIKSYYKTASLIAASTKGAAIFSGVDSSVAEQMYEYGKNLGL 304

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 305 SFQVVDDVLD 314


>gi|73542643|ref|YP_297163.1| trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134]
 gi|72120056|gb|AAZ62319.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134]
          Length = 325

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A  F  +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 46  GGKRLRPVILLMSARAFGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRETAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++    +     +R   +LS   N+  +G +  Q+L++ 
Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVDAGS-----MRIMEILSNATNVIAEGEVL-QLLNMH 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + + KT  L   + + GA++A A    +E    +G  +G  FQL DD+L
Sbjct: 158 DPDVTIERYLQVIRYKTAKLFEASAQLGAVLAGADAAMEEAAAEYGRRIGTAFQLIDDML 217

Query: 229 D 229
           D
Sbjct: 218 D 218


>gi|282866077|ref|ZP_06275125.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282559116|gb|EFB64670.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 367

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 76  GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T ++    ++ + S T       ++ GQ  DI 
Sbjct: 134 KVHGPAQAILVGDALFALANEVLLELGT-VEAGRAARRLTSATRK-----LIDGQAQDIS 187

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 188 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADVLEAYGYHLGLAFQAVD 247

Query: 226 DLL 228
           DLL
Sbjct: 248 DLL 250


>gi|196228124|ref|ZP_03126991.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428]
 gi|196227527|gb|EDY22030.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428]
          Length = 590

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 15/190 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            GK+ R FL               +     +V  A+EC H  SLIHDD+   DN   R G
Sbjct: 271 AGKRWRPFLTVAAYQALRTTPGAPIPDDLRKVAVAVECFHKASLIHDDI--EDNDAQRYG 328

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT+H ++    A+  G+ L+   + ++++     +  +    ML +    G + +  GQ
Sbjct: 329 EPTLHEEHGIAVALNVGDLLIGEGYRLLAACNASPEQKV---AMLRIAAE-GQRELCRGQ 384

Query: 164 MLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             ++    Q + +  T+V  I + KT      A + G + A   +  +E L+ + E LGI
Sbjct: 385 GAELVWARQPQPLTSTEVLDIFRKKTAPAFGVALQLGTVYAGQLEEHEEVLQAYSEALGI 444

Query: 220 IFQLADDLLD 229
            +Q+ DDL D
Sbjct: 445 AYQIRDDLSD 454


>gi|182434756|ref|YP_001822475.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326775273|ref|ZP_08234538.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
 gi|178463272|dbj|BAG17792.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326655606|gb|EGE40452.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
          Length = 367

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 76  GGKAVRPALALLSAEAAGAPAEAGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A++++    T        +L  +       + ++ GQ  DI 
Sbjct: 134 KVHGPAQAILVGDALFALAYDLLLELGTVEAGRAARRLTTAT------RKLIDGQAQDIS 187

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 188 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVD 247

Query: 226 DLL 228
           DLL
Sbjct: 248 DLL 250


>gi|302807465|ref|XP_002985427.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii]
 gi|300146890|gb|EFJ13557.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii]
          Length = 415

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 35/248 (14%)

Query: 4   GLPSKLQENSKR--------IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKK 52
           G+ S +Q   +R        I+ +  DL  L Q    +    N  L+SA       GGK+
Sbjct: 77  GVASYVQRRERREKLSLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKR 136

Query: 53  IRS---FLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           +R    FLV+      +  N  HL   R+    E IH  SLIHDD+  +D   +RRGK T
Sbjct: 137 MRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKET 194

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQM 164
           VH  Y    A++AG+ +   +   +++      DN+    ++S        G +     +
Sbjct: 195 VHQLYGTRIAVLAGDFMFAQSSWYLAN-----LDNLEVIKLISQVIKDFASGEIQQASSL 249

Query: 165 LDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            D +   D ++D++        KT +L+  +  S AI + A  +  +++  +G+ LG+ F
Sbjct: 250 FDSEITLDNYLDKSY------YKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAF 303

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 304 QIVDDILD 311


>gi|17505681|ref|NP_491588.1| COenzyme Q (ubiquinone) biosynthesis family member (coq-1)
           [Caenorhabditis elegans]
 gi|15617696|gb|AAB37678.2| Coenzyme q (ubiquinone) biosynthesis protein 1, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 393

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 18/163 (11%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++G   E IH  SL+HDD+  +D    RRG  +V+  +    +++ G+ +L  A +I+ S
Sbjct: 137 KIGMIAEMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCS 194

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----FMIQKM--KTGA 187
                K NI S +M S+  ++ L     G+ + +     D T V      I+K   KT +
Sbjct: 195 IG---KPNIIS-VMASIIEDLVL-----GEFMQMSTTPTDATPVDRMKAYIEKTHRKTAS 245

Query: 188 LMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLD 229
           L   +C S AI+A  S  +   +   +G NLGI FQLADDLLD
Sbjct: 246 LFASSCRSAAILADGSDLKLHEIAFEYGRNLGIAFQLADDLLD 288


>gi|255078126|ref|XP_002502643.1| predicted protein [Micromonas sp. RCC299]
 gi|226517908|gb|ACO63901.1| predicted protein [Micromonas sp. RCC299]
          Length = 452

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 49/240 (20%)

Query: 19  ILDDLLLQTASHMQT----------QHNDRLLSAIRYAL-LGGKKIRSFLV----TECAS 63
           ++DD++    S M+           + N  LL+A       GGK++R  LV       A 
Sbjct: 130 VIDDIIAPVKSDMEQMRSNILDIVGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAQ 189

Query: 64  LFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           L +++ +T    R+    E IH  SL+HDD+  +D+   RRG  T+H  Y    AI+AG+
Sbjct: 190 LMSMDDITERQRRLAEITEMIHTASLVHDDV--LDDCDTRRGAETIHTLYGTRVAILAGD 247

Query: 122 GLLTYA------------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            L   +             ++IS       D   SQ       ++ L+G           
Sbjct: 248 FLFAQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALFNCDVTLEG----------- 296

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +++++        KT +L+  +C+S A+ +  S++ K  +  +G++LG+ FQ+ DD+LD
Sbjct: 297 -YLEKSH------NKTASLIAASCKSAAVFSEVSEDVKMDMYEYGKHLGLAFQIVDDILD 349


>gi|284166593|ref|YP_003404872.1| polyprenyl synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016248|gb|ADB62199.1| Polyprenyl synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 280

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 23/217 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +R+  ++DDL    A   + +H          AL GGK++R  +              A+
Sbjct: 13  ERLVEVVDDLE-PDALRAEVEHT---------ALAGGKRVRPMVTVLACETVGGTAEDAV 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
             G  IE +H  SL+ DD+  +D   +RRG  +   ++    AI++ +GLL  AF + SS
Sbjct: 63  DFGVGIELVHAASLVVDDI--IDRSELRRGTTSAWAEFGYGPAIVSSDGLLGEAFALFSS 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D   ++++      +G+     G+  ++  E   E +   + + KTGAL   A 
Sbjct: 121 ------DPDATRVVAEAMVELGI-----GEATELSAEPETEAEYMTLARRKTGALFRAAA 169

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           E GAI A +     E L  + E +G+ FQ+ DD+LD 
Sbjct: 170 ELGAIAAGSDAVTVEALGEYAERVGVAFQIRDDVLDA 206


>gi|260495254|ref|ZP_05815382.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_33]
 gi|260197311|gb|EEW94830.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_33]
          Length = 326

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L GK  RS L+  CA L   +  N     ++ A +E  H  SLIHDD+  +D+   RRGK
Sbjct: 40  LSGKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++  +Y +  A+ AG+ L+   F         L + +    +LS T      G +   +
Sbjct: 98  VSIQGKYGKDAAVFAGDFLMARIF--YYGAVENLNEAVS---ILSKTVEYMCIGEIEQDL 152

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              Q++ I E + F   + KT AL   A   GA  +  S+   ++L  F +NLG++FQL 
Sbjct: 153 CRYQED-ISENKYFENIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLK 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|56459585|ref|YP_154866.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
 gi|56178595|gb|AAV81317.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
          Length = 324

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L                ++   IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 44  GGKRLRPLLAILACRALGYEGNDHRKLATIIEFIHTATLLHDDV--VDESELRRGRKTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++        D++R   +L+   NI  +G +  Q+++  
Sbjct: 102 AVFGNEASVLVGDFLYTRAFQLMVDL-----DSLRILRILADATNIISEGEVL-QLMNCN 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E   F +   KT  L   A E   ++    +   ++L  +G  LG  FQL DDL+
Sbjct: 156 DPDTSEASYFNVIYGKTAKLFEAATELAGVLTAQDEKVTQQLADYGRYLGTAFQLVDDLM 215

Query: 229 DCEED 233
           D   D
Sbjct: 216 DYTAD 220


>gi|328958756|ref|YP_004376142.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp.
           17-4]
 gi|328675080|gb|AEB31126.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp.
           17-4]
          Length = 326

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 22/189 (11%)

Query: 49  GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R   + L +      + N   A    AAIE +H  +LIHDD+  +D+   RRG+ 
Sbjct: 46  GGKLVRPAYTLLFSTFGEDQDPNRARAF--AAAIEVLHMATLIHDDV--IDDSPKRRGQQ 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  +Y +  A+ AG+ L T +F++I+     +K     Q+ ++     G++ +L G++ 
Sbjct: 102 TIQSKYGKDIAVYAGDYLFTVSFKLITDYSNSMK-----QMQINTK---GMEKILMGEID 153

Query: 166 DIQDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCF--GENLGII 220
            +   +  +  +  ++ Q   KT  L   +C SGA+   + Q E+    C+  G ++G+ 
Sbjct: 154 QMHLRYNQKITIRNYLTQISGKTAQLFALSCYSGAL--ESGQTERFARNCYYIGSHIGMA 211

Query: 221 FQLADDLLD 229
           FQ+ DD+LD
Sbjct: 212 FQIKDDILD 220


>gi|229496293|ref|ZP_04390013.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316871|gb|EEN82784.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 325

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 17/189 (8%)

Query: 50  GKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK IR  L+    SL     N  T +     +E +H  SLIHDD+  +D   +RRGKPT+
Sbjct: 45  GKHIRPILMGLLVSLQGKEPNQRT-ISCAVLLEMLHMASLIHDDV--IDQAPLRRGKPTL 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  Y   +A++ G+ +L+ AF   +         I    ++    N+G + +  G++L I
Sbjct: 102 NAFYGNHSAVLVGDYILSIAFLRAA--------EIGGSSLIRTVANLG-KHLSEGELLQI 152

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q   +  IDE   F I + KT  L       G     A   E  ++   G++LGI FQL 
Sbjct: 153 QVATERIIDEKNYFSIIEKKTATLFEACAALGMYSIDAKPEELLKMTQLGKHLGIAFQLR 212

Query: 225 DDLLDCEED 233
           DD+ D  ++
Sbjct: 213 DDIFDYTKE 221


>gi|85712490|ref|ZP_01043538.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
 gi|85693624|gb|EAQ31574.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
          Length = 323

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L               L +   IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLAVLSCRALGYEGRAHLSLATIIEFIHTATLLHDDV--VDESELRRGRKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++     QL D++    +L+   N+  +G +  Q+++  
Sbjct: 101 AVFGNEASVLVGDFLYTRAFQMM----VQL-DSMTILSILADATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E + F +   KT  L   A +   ++        E+L  +G  LG  FQL DDL+
Sbjct: 155 DPDTTEARYFDVIYGKTAKLFEAATQLAGVLTEQDSTVTEQLADYGRYLGTAFQLVDDLM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|303289847|ref|XP_003064211.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454527|gb|EEH51833.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 324

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 41/209 (19%)

Query: 49  GGKKIRSFLV----TECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R  LV       A L ++  +T    R+    E IH  SL+HDD+  +D+   RR
Sbjct: 43  GGKRLRPVLVFLVARSTAQLMDMPEITDRQRRLAEITEMIHTASLVHDDV--LDDCDTRR 100

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA------------FEIISSPKTQLKDNIRSQLMLSL 150
           G  T+H  Y    AI+AG+ L   +             ++IS       D   SQ     
Sbjct: 101 GAQTIHTLYGTRVAILAGDFLFAQSSWYLANLDNLEVIKLISQVIADFADGEISQAGALF 160

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             ++ L+G L                       KT +L+  +C+S A+ +  S++ K  +
Sbjct: 161 NCDVTLEGYLEKS------------------HNKTASLIAASCKSAAVFSEVSEDIKVDM 202

Query: 211 RCFGENLGIIFQLADDLLD---CEEDLPK 236
             +G++LG+ FQ+ DD+LD    EE L K
Sbjct: 203 YEYGKHLGLAFQVVDDILDFTQTEEQLGK 231


>gi|218197333|gb|EEC79760.1| hypothetical protein OsI_21146 [Oryza sativa Indica Group]
          Length = 581

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 22/216 (10%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVNHLTA--LRVG 76
           LL+  +++ T+ N  L+SA       GGK++R    FLV+   A L  +  LT    R+ 
Sbjct: 274 LLRALTYIHTE-NPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTEHQRLA 332

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +   +   ++    
Sbjct: 333 EIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLA---- 386

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC 193
               N+ +  ++ L   + ++    G++      F   +      +    KT +L+  + 
Sbjct: 387 ----NLENIEVIKLISQV-IKDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLASST 441

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            S AI +  S    E++  +G NLG+ FQ+ DD+LD
Sbjct: 442 RSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILD 477


>gi|91785273|ref|YP_560479.1| octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400]
 gi|91689227|gb|ABE32427.1| Octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400]
          Length = 330

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPALLLLVAGALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++          +R   +LS   NI  +G +  Q+L++ 
Sbjct: 109 ALFGNAASVLVGDFLYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A + GA++A +    +     FG  +G  FQ+ DD L
Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|296160521|ref|ZP_06843337.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1]
 gi|295889270|gb|EFG69072.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1]
          Length = 330

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++   
Sbjct: 77  LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGV 134

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  +R   +LS   NI  +G +  Q+L++ D  +DE +   + + KT  L   A +
Sbjct: 135 G-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GA++A +    +     FG  +G  FQ+ DD LD
Sbjct: 189 LGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLD 223


>gi|256027542|ref|ZP_05441376.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           D11]
 gi|289765501|ref|ZP_06524879.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           D11]
 gi|289717056|gb|EFD81068.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           D11]
          Length = 326

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L GK  RS L+  CA L   +  N     ++ A +E  H  SLIHDD+  +D+   RRGK
Sbjct: 40  LSGKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGK 97

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++  +Y +  A+ AG+ L+   F         L + +    +LS T      G +   +
Sbjct: 98  VSIQGKYGKDAAVFAGDFLMARIF--YYGAVENLNEAVS---ILSKTVEYMCIGEIEQDL 152

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              Q++ I E + F   + KT AL   A   GA  +  S+   ++L  F +NLG++FQL 
Sbjct: 153 CRYQED-ISEKKYFENIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLK 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|187925422|ref|YP_001897064.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN]
 gi|187716616|gb|ACD17840.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
          Length = 330

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++   
Sbjct: 77  LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGV 134

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  +R   +LS   NI  +G +  Q+L++ D  +DE +   + + KT  L   A +
Sbjct: 135 G-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GA++A +    +     FG  +G  FQ+ DD LD
Sbjct: 189 LGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLD 223


>gi|167627921|ref|YP_001678421.1| polyprenyl synthetase family protein [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167597922|gb|ABZ87920.1| polyprenyl synthetase family protein [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 325

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 13/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +   N      L   A IE IH  +L+HDD+  +D+ ++RRGK T +
Sbjct: 44  GGKRLRPLLVMLFSRALNYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + AF+++        DN++  Q++   T+ I    +L  Q+L+ 
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVGL-----DNMQIMQILADATNKISEGEVL--QLLNA 154

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE---KERLRCFGENLGIIFQLA 224
           ++  + E     +   KT  L   ACE   +++   Q+    +  ++ +G  LG  FQ+A
Sbjct: 155 RNIELSEEDYTNVIYCKTAKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIA 214

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 215 DDVLDYVSD 223


>gi|83945354|ref|ZP_00957702.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851188|gb|EAP89045.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 351

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 14/205 (6%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           + +A+    Q  D L++A      GGK+IR  +    A +        + + AA+E IH 
Sbjct: 52  MASATRSIPQTADYLVAA------GGKRIRPLITVTAARMLGYEGDGHVSLAAAVEYIHS 105

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRGK   +  +    +++ G+ L   +F ++    +     + +
Sbjct: 106 ATLLHDDV--VDESELRRGKAPANTVWGNAHSVLVGDFLFARSFMMMVDAGS-----MDA 158

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             +LS   ++  +G +  Q+  +++  I   +   I   KT AL   A +   I+  + +
Sbjct: 159 LHVLSRAASVIAEGEVR-QLAAVRNIDISRDEYMSIIDAKTAALFSAAAQVAPILYGSDK 217

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
             ++ L  +G  LG+ FQL DD LD
Sbjct: 218 AIEDGLETYGRELGLAFQLVDDALD 242


>gi|167564177|ref|ZP_02357093.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis EO147]
 gi|167571298|ref|ZP_02364172.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis C6786]
          Length = 330

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPALLLLVAGALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 163 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|320008620|gb|ADW03470.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 349

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 17/204 (8%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           H   Q  D   +A R     GK IR  LV   A     +   A+R   A+E  H ++L+H
Sbjct: 48  HFGWQDADGTPAAGR----AGKAIRPALVLAAARAVGGDPDAAMRAAVAVELAHNFTLLH 103

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RR +PT    +    A+I G+ + + A  +++        +   +L   
Sbjct: 104 DDV--IDEDTTRRHRPTAWAVFGVPDAVITGDAMFSLALRLLTDDPHPASPHAAGRLSTC 161

Query: 150 LTHNIGLQGMLGGQMLD--IQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +        +  GQ  D  ++D   D+    +   +   KTGAL+  AC  GA+   A +
Sbjct: 162 VIE------LCAGQQADCGLEDRGPDDVTLDECLAMAMAKTGALLGCACALGALYGGADE 215

Query: 205 NEKERLRCFGENLGIIFQLADDLL 228
                +  FG   G+ FQL DDL+
Sbjct: 216 RAVRAMDGFGREAGLAFQLIDDLI 239


>gi|119472626|ref|ZP_01614617.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7]
 gi|119444830|gb|EAW26131.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7]
          Length = 323

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          + +   +E IH  +L+HDD+  +D   +RRG PT +
Sbjct: 43  GGKRVRPMLAILAAKALGYTGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            ++    +++ G+ + T +F++ +   K Q+      Q++   T+ I    +L  Q+++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQLMVGLGKMQIM-----QILADATNIIAEGEVL--QLMNC 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     +   KT  L   A    AI+ +  +     L  +G +LG  FQL DD+
Sbjct: 154 NDPDTTEASYMQVIYSKTAKLFEAATGLAAIITNNDEATLNALNLYGMHLGTAFQLVDDV 213

Query: 228 LDCEED 233
           LD   D
Sbjct: 214 LDYNAD 219


>gi|307262498|ref|ZP_07544143.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306867875|gb|EFM99706.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 331

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESNMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|297545452|ref|YP_003677754.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843227|gb|ADH61743.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 322

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK +R   V         +    L + AAIE +H  +L+HDD+  +DN  IRR KPT+ 
Sbjct: 44  SGKMLRPAFVILAGKFGEYDREKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQ 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLD 166
            +Y +  A+  G+ L + +F ++S       DNI    +  ++  +    +G +G Q   
Sbjct: 102 AKYGKDYAVFIGDFLFSESFLLLS-------DNITVSNLKKVSKVVSKICKGEIG-QFES 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             + +I           KT AL   +   GA  +   ++  + L   G N+G+ FQ+ DD
Sbjct: 154 RHNIYITINDYLRRIAAKTAALFALSFYVGAYESKCDESLAKALGSIGYNIGMAFQIIDD 213

Query: 227 LLD 229
           +LD
Sbjct: 214 ILD 216


>gi|153007031|ref|YP_001381356.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152030604|gb|ABS28372.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 349

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 14/202 (6%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            ++L +A R+ +  GGK+IR  +          +   A+    + E  H  +L+HDD+  
Sbjct: 54  EEKLRAAARHLVSAGGKRIRPMVTLLSCGACGGDMRAAVPYAVSAELTHSATLLHDDV-- 111

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D+G +RRG+P   + +    ++++G+ LLT A EI+S+      +  RS  +  L    
Sbjct: 112 IDDGPLRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSA------EPARSAALPPLLAT- 164

Query: 155 GLQGMLGGQML--DIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            ++ ++ G++L   ++  F   E     +   KT +L  +A  +GA  A       E L 
Sbjct: 165 -MRRLVEGEVLQLSLRSSFSATEKDYLDVVIGKTASLFGWAAAAGAWAAGQVGRIPEALV 223

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FGE +GI FQL DD LD   D
Sbjct: 224 QFGEGIGIAFQLVDDALDYAAD 245


>gi|91200422|emb|CAJ73469.1| similar to octaprenyl diphosphate synthase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 323

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 107/220 (48%), Gaps = 20/220 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFNVNHLTA 72
           I+ ++D++  +    +Q Q+N      +  +   GK++R   + L  +C S     H+  
Sbjct: 10  IEPLMDEVEARFYKELQPQNNSLADLVVHISKYKGKRLRPALTLLSGKCISDTAPQHID- 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +   +E +H  +L+HDD+  +D   +RR   +++ ++    +I+ G+ L +  F I+S
Sbjct: 69  --LAVVVEMVHTATLVHDDI--IDEAAMRRHVESMNSKWGREISILFGDYLFSRGFTILS 124

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM 189
           +  +Q+     + L+LS T N     M  G+++ ++  +   + E     I + KT +L 
Sbjct: 125 ALDSQI-----ATLLLSQTVNT----MCEGELIQLKRRYDVGLSEEDYIDIIEKKTASLC 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +C  GA  A A+    E +  +G  +G  FQ+ DD LD
Sbjct: 176 ATSCRLGATFAGANHKLSEMMSNYGLKIGTAFQIIDDCLD 215


>gi|297625742|ref|YP_003687505.1| Heptaprenyl diphosphate synthase component II [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921507|emb|CBL56061.1| Heptaprenyl diphosphate synthase component II [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 356

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV   + L    N   A      +E  H  SL HDD+  MD+  +RRG P+ 
Sbjct: 78  GGKRFRPMLVAVTSQLGPQPNDAAAQIAAVVVELTHVASLYHDDV--MDDAALRRGVPSA 135

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  Y   TAI+ G+ L   A   ++   T   D +R Q   + T    + G +  +M   
Sbjct: 136 NAAYGNSTAIMVGDWLFARASNQVA---TLGNDFVRMQ---ADTFAELVTGQI-DEMRGP 188

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           Q           +   KTGAL+  +   GA+ + AS+   + L  FG  +G++FQLADDL
Sbjct: 189 QPGHDAMLHYLNVVAGKTGALIRTSAVFGAMTSGASREVLDALAQFGMQIGVVFQLADDL 248

Query: 228 LDCEED 233
           +D   D
Sbjct: 249 MDIMSD 254


>gi|328886497|emb|CCA59736.1| Octaprenyl-diphosphate synthase ; Dimethylallyltransferase ;
           Geranyltranstransferase (farnesyldiphosphate synthase) ;
           Geranylgeranyl pyrophosphate synthetase [Streptomyces
           venezuelae ATCC 10712]
          Length = 352

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 11/182 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A    V     +    A+E +H +SL+HDDL  MD    RR + TV  
Sbjct: 62  GKAVRPALALLSAEAAGVAPEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWK 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AI+ G+ L   A EI+    T        +L  +       + ++ GQ  DI  
Sbjct: 120 VHGPAQAILVGDALFALANEILLELGTVEAGRATRRLTTAS------RKLIDGQAQDISY 173

Query: 170 EFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E  +   V     ++  KTGAL+  A   GA++  A     ++L  +G +LG+ FQ  DD
Sbjct: 174 EHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDD 233

Query: 227 LL 228
           LL
Sbjct: 234 LL 235


>gi|226307057|ref|YP_002767017.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
           PR4]
 gi|226186174|dbj|BAH34278.1| probable geranylgeranyl pyrophosphate synthase [Rhodococcus
           erythropolis PR4]
          Length = 379

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 37/212 (17%)

Query: 45  YALLGGKKIR-SFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R SF  T            +    +R  AA+E +   +L+HDD+  +D   
Sbjct: 64  FVLRGGKRVRPSFAWTGWLGAGGDPNGSDAEAVIRACAALELVQACALVHDDI--IDAST 121

Query: 100 IRRGKPTVHIQYD----------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG PTVH++++                E  AI+ G+  L +A ++I           R
Sbjct: 122 TRRGFPTVHVEFEDQHRGEEWSGDSAHFGEAVAILLGDLALAWADDMIRESGISPDAAAR 181

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMCFACES----G 196
              + S         +LGGQ LDI +E   DET      + + KT A   +  E     G
Sbjct: 182 VSPVWSAMRTE----VLGGQFLDISNEARGDETVEAAMRVNRYKTAA---YTIERPLHLG 234

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A +  A     +  R FG ++GI FQL DDLL
Sbjct: 235 AALFGADAELIDAYRTFGTDIGIAFQLRDDLL 266


>gi|13383239|dbj|BAB39470.1| putative GGPP synthase 3 [Lactuca indica var. laciniata]
          Length = 127

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 7/129 (5%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT H  Y E  A++AG+ LL +AF+ I+S             +  L  +IG 
Sbjct: 1   NDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFQHIASATVGASPERVLAAVGELAKSIGT 60

Query: 157 QGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +G++ GQ++DI     +D  +D+ +   I   KT AL+  A   GAI+   S  + E+LR
Sbjct: 61  EGLVAGQVVDIASTGAKDVGLDQLEFIHIH--KTAALLEAAVVLGAILGGGSDTQVEKLR 118

Query: 212 CFGENLGII 220
            F   +G++
Sbjct: 119 KFARCIGLL 127


>gi|320100357|ref|YP_004175949.1| polyprenyl synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752709|gb|ADV64467.1| Polyprenyl synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 367

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 40/214 (18%)

Query: 45  YALLGGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           Y L GGK++R+FL        E  S  + + +T+L  G  IE +  Y L+HDD+  MD  
Sbjct: 50  YTLRGGKRLRAFLTLVGYWSKEWGS-GDPSLITSLMTG--IELLQSYLLVHDDV--MDRD 104

Query: 99  YIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
            IRRG PTVH                  Y +  AI  G+ L   A E +S  +  +   +
Sbjct: 105 EIRRGGPTVHSWFRDKCIREFKTGDCTHYGDSQAITVGDFLEATAVEYVS--RAGINGEV 162

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMC-FACESG 196
            S+L+   T+  GL+ +  GQ LD+   +     + E  V ++ ++KT +         G
Sbjct: 163 LSKLL--GTYAAGLRKVAYGQYLDVLFSYRSLHEVSERDVLLVHRLKTASYTIELPLHMG 220

Query: 197 AIMAHASQNEK--ERLRCFGENLGIIFQLADDLL 228
           AI A    NE+    L  +    GI FQL DD++
Sbjct: 221 AI-ASGKYNERLLGELSSYAIPAGIAFQLRDDII 253


>gi|222147711|ref|YP_002548668.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4]
 gi|221734699|gb|ACM35662.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4]
          Length = 338

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A++F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASAAMFGYEGEGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +    ++ S     +     LQ  +   M   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVEVGSLEALDVLSTAASVIAEGEVLQLSVAKNMETTE 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D++        + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD L
Sbjct: 175 DDYQ------AVIRAKTAALFAAAAEVGPIVAGTDKAARNALKSYGMNLGLAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|322369459|ref|ZP_08044024.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253]
 gi|320551191|gb|EFW92840.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253]
          Length = 351

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 28/214 (13%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLV-------------TECASLFNVNHLTALRVGAA---I 79
           +RL  A RY L  GGK++R  ++             +E    F     T L V AA   I
Sbjct: 38  ERLYEASRYLLDAGGKRLRPTVLLLVADALADVEPMSEAYRKFPALDGTELDVMAAAVSI 97

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E I  ++LIH     MD+  +RRG P+VH  YD  TAI+AG+ L + AFEI+        
Sbjct: 98  EVIQSFTLIH--DDIMDDDDLRRGVPSVHRAYDTETAILAGDTLYSKAFEIMLETDATPD 155

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACES 195
             + +  +L+ T       +  GQ LD+    + + + +  + MI+  KT  L   A + 
Sbjct: 156 RCVTALDVLASTCT----RICEGQALDVAFEERPDVLPDEYLEMIEN-KTAVLYGAAAKV 210

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A++  A +   E L  +G ++G  FQ+ DD+LD
Sbjct: 211 PAVLLGADEETTEALYRYGIDVGRAFQIQDDVLD 244


>gi|312141024|ref|YP_004008360.1| polyprenyl synthetase [Rhodococcus equi 103S]
 gi|325675339|ref|ZP_08155023.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707]
 gi|311890363|emb|CBH49681.1| polyprenyl synthetase [Rhodococcus equi 103S]
 gi|325553310|gb|EGD22988.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707]
          Length = 342

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 16/194 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGY 99
           +A+  A  GGK+ R       A L       A+   A + E +H  +L HDD+  MD   
Sbjct: 54  AALHLAKAGGKRFRPLFTVLTAQLGPEGSDPAVVTAATVVELVHLATLYHDDV--MDEAA 111

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG P+ + ++    AI+AG+ L  +A  ++S   T   + +R   +++ T       +
Sbjct: 112 MRRGAPSANARWGNSIAILAGDYLFAHASRLVS---TLGPEAVR---IIAET----FAEL 161

Query: 160 LGGQMLDI--QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + GQM +     E  D  + ++ +   KTG+L+  +   G   + A  ++  RL   G+ 
Sbjct: 162 VTGQMRETIGAREKQDPVEHYLKVVWEKTGSLIAASGRFGGTFSGADADQIARLERLGDA 221

Query: 217 LGIIFQLADDLLDC 230
           +G  FQ+ADD++D 
Sbjct: 222 VGTAFQIADDIIDI 235


>gi|294816066|ref|ZP_06774709.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294328665|gb|EFG10308.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 369

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 78  GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 135

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T        +L  +         ++ GQ  DI 
Sbjct: 136 KVHGPAQAILVGDALFALANEILLELDTVEAGRATRRLTTATLR------LIDGQAQDIS 189

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 190 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVD 249

Query: 226 DLL 228
           DLL
Sbjct: 250 DLL 252


>gi|242278239|ref|YP_002990368.1| dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638]
 gi|242121133|gb|ACS78829.1| Dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638]
          Length = 322

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 15/192 (7%)

Query: 44  RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           R+ LL  GK+IR  L    A            +  ++E +H  +L+HDD+  +D+  +RR
Sbjct: 35  RHVLLAPGKRIRPVLTILSARGLGYGKDDIYPLAGSLELLHAATLLHDDI--LDDADLRR 92

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G    H+ +     I+AG+ LL  A +I +      K  I S L        G+   + G
Sbjct: 93  GVEASHLVFGTTETILAGDVLLALANKIGADYG---KPRISSVLA------SGIMATVEG 143

Query: 163 QMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++L+I    +  ++      I   KT  L+  +C  GAI+A   +  ++ +  FG N+GI
Sbjct: 144 EILEIAHISEPLMNRDTYMDIIIGKTARLIETSCRLGAILASDDRAMEDAVGNFGLNMGI 203

Query: 220 IFQLADDLLDCE 231
            FQL DD LD E
Sbjct: 204 AFQLVDDALDYE 215


>gi|116749021|ref|YP_845708.1| trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698085|gb|ABK17273.1| Trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans
           MPOB]
          Length = 323

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 23/238 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLV 58
           M   + S++Q + +RI+  ++ LLL T+          L+S + RY +  GGK++R  L+
Sbjct: 1   MKESIISRIQPDLRRIEEEIE-LLLTTSVP--------LISVVGRYIMGSGGKRLRPLLL 51

Query: 59  TECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
              A L  +  +H  +L V    E IH  SL+HDD+  +D+   RR +P  +  +     
Sbjct: 52  VLSARLCGYQGSHDASLAV--VFEFIHAASLLHDDV--VDHAKFRRNRPAANTVWGNQAV 107

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L + A  +     +     + S+    ++    LQ      ++   +  I E +
Sbjct: 108 VLVGDFLYSKAIHLTVGYNSLRMLEVLSEATTRMSEGEVLQ------LVHADNIEISEEE 161

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
              +   KT  L+  AC+ GA+        ++ L+ +G NLGI FQL DD LD   D+
Sbjct: 162 YIEVITRKTAVLISAACQIGALFGGNDVQREKALKTYGHNLGIAFQLVDDTLDYTGDV 219


>gi|116629023|ref|YP_814195.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
           33323]
 gi|116094605|gb|ABJ59757.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
           33323]
          Length = 338

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L+  +  ++S 
Sbjct: 82  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS- 138

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFG 191

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC  GA  +     +  + + FGE LG  FQL DD+LD
Sbjct: 192 LACFIGAYESGTKVTKALKTKKFGEYLGQAFQLRDDILD 230


>gi|302391328|ref|YP_003827148.1| trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM
           5501]
 gi|302203405|gb|ADL12083.1| Trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM
           5501]
          Length = 335

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 22/202 (10%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ++RLL+A      GGK++R  LV     L + +    + +GA++E +H  +LIHDD+  +
Sbjct: 36  SNRLLNA------GGKRLRPLLVLLSGKLNDHSAQDLISIGASVELLHMATLIHDDV--I 87

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RR + T++  +    A+++G+ L T A +++        D I       + + + 
Sbjct: 88  DNSLHRRSENTINQDWGNKVAVLSGDLLYTQALKLLVEHGN---DEI-------VNYMLD 137

Query: 156 LQGML--GGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLR 211
           + G++  G     + +  +++     I K+  KT  L+  +C+ GA+++     +   + 
Sbjct: 138 IVGLICEGEAKQAVTNHDLNQDMKDYINKITKKTALLIGASCKLGAMVSQVDAKKAAAME 197

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +G+NLGI FQ+ +DL D   D
Sbjct: 198 SYGKNLGIAFQIINDLNDIVAD 219


>gi|56698924|gb|AAW23160.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis]
          Length = 379

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 37/212 (17%)

Query: 45  YALLGGKKIR-SFLVTEC-ASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R SF  T    +  + N   A   +R  AA+E +   +L+HDD+  +D   
Sbjct: 64  FVLRGGKRVRPSFAWTGWLGAGGDPNGSGADAVIRACAALELVQACALVHDDI--IDAST 121

Query: 100 IRRGKPTVHIQYD----------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG PTVH++++                E  AI+ G+  L +A ++I           R
Sbjct: 122 TRRGFPTVHVEFEDQHRGEEWSGDSAHFGEAVAILLGDLALAWADDMIRESGISPDAAAR 181

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMCFACES----G 196
              + S         +LGGQ LDI +E   DET      + + KT A   +  E     G
Sbjct: 182 VSPVWSAMRTE----VLGGQFLDISNEARGDETVEAAMRVNRYKTAA---YTIERPLHLG 234

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A +  A     +  R FG ++GI FQL DDLL
Sbjct: 235 AALFGADAELIDAYRTFGTDIGIAFQLRDDLL 266


>gi|293390542|ref|ZP_06634876.1| heptaprenyl diphosphate synthase component II [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951076|gb|EFE01195.1| heptaprenyl diphosphate synthase component II [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 329

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     +   A+     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARALGFDGQQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL+     ++M   T N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QLESLKILRIMADAT-NVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A A   +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGADDTQEKALQNYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|261868528|ref|YP_003256450.1| octaprenyl-diphosphate synthase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413860|gb|ACX83231.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase)
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 329

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     +   A+     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARALGFDGQQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL+     ++M   T N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QLESLKILRIMADAT-NVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A A   +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGADDTQEKALQNYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|257459693|ref|ZP_05624802.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter
           gracilis RM3268]
 gi|257443118|gb|EEV18252.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter
           gracilis RM3268]
          Length = 330

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 58/249 (23%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           +ID I+   +        ++  DRL          GKK+RS L+   A         +LR
Sbjct: 4   QIDLIMKSFIADCGYEPASEMFDRLSP--------GKKLRSKLLLNIAR----KDEKSLR 51

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-FEIISS 133
           + A IE I   SL+HDD+  +D   +RRGKP+++  Y    A++ G+ L + A FE+   
Sbjct: 52  LCAIIELIQAASLLHDDV--IDESSVRRGKPSINATYGSKNAVMLGDILYSKAYFEL--- 106

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM-IQKMKTGALMC 190
             ++ +  I + L L++T       +  G+++D+   D+F D+   ++ +  +KT AL+ 
Sbjct: 107 --SKFESRIAAALSLAVTK------LAVGELMDVSLSDDFNDDASKYLQMIYLKTSALIE 158

Query: 191 FACESGAIMAHAS-------------QNEKE----------------RLRCFGENLGIIF 221
                GA +   S             +NE E                +   +G+NLG+ F
Sbjct: 159 EVARCGAFLKFGSAENRGEISDMSGKKNEGEIPSAAKDHNKISSASAKFGKYGKNLGLAF 218

Query: 222 QLADDLLDC 230
           Q+ DD+LD 
Sbjct: 219 QIIDDILDV 227


>gi|119714798|ref|YP_921763.1| trans-hexaprenyltranstransferase [Nocardioides sp. JS614]
 gi|119535459|gb|ABL80076.1| Trans-hexaprenyltranstransferase [Nocardioides sp. JS614]
          Length = 334

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 18/190 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+ R  LV   A      H  A  V  A   +E  H  SL HDD+  MD   +RRG  
Sbjct: 54  GGKRFRPLLVLLAAE--TGEHPDADEVITAACVVELTHLASLYHDDV--MDEAELRRGAV 109

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQ 163
           + + ++D   AI+ G+ L + + E+ +       D +R Q      L     L+ +  G 
Sbjct: 110 SANARWDNHVAILTGDFLFSKSSELTAELG---PDAVRVQARTFTRLVEGQILETVQPGP 166

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             D    ++D      +   KTG+L+  +   GA    AS+  +E L  +GE +G  FQL
Sbjct: 167 GEDPLAHYLD------VVAGKTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQL 220

Query: 224 ADDLLDCEED 233
           +DD+LD   D
Sbjct: 221 SDDILDIASD 230


>gi|326444408|ref|ZP_08219142.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 355

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 64  GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T        +L  +         ++ GQ  DI 
Sbjct: 122 KVHGPAQAILVGDALFALANEILLELDTVEAGRATRRLTTATLR------LIDGQAQDIS 175

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 176 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVD 235

Query: 226 DLL 228
           DLL
Sbjct: 236 DLL 238


>gi|298490219|ref|YP_003720396.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708]
 gi|298232137|gb|ADI63273.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708]
          Length = 323

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L++    L         R+    E IH  SL+HDD+  +D   +RRG P
Sbjct: 44  GGKRIRPAIVLLISRATMLEKDITPRHRRLAEITEMIHTASLVHDDV--VDESNVRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH  +    A++AG+ L   +   +++        + S++++ L      QG      L
Sbjct: 102 TVHSLFGNRIAVLAGDFLFAQSSWYLANLDNLDVVKLLSEVIMDLAAGEIQQG------L 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  +           KT +L+  + ++  +++  SQ   E L  +G++LG+ FQ+ D
Sbjct: 156 NRFDTNLSTETYLKKSYYKTASLIANSSKAAGLLSEVSQKSAENLYNYGKHLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|13383243|dbj|BAB39472.1| putative GGPP synthase 1 [Metaplexis japonica]
          Length = 127

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E  A++AG+ LL +AFE I++    ++       +  L  +IG 
Sbjct: 1   NDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEYIATATAGVEPARVLAAIGELAKSIGT 60

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++D+       +   Q+  I   KT AL+  +   GAI+   +Q E E+LR F
Sbjct: 61  EGLVAGQVVDLSCTGKSNVGLDQLEFIHIHKTAALLEASVVLGAILGGGTQEEVEKLRRF 120

Query: 214 GENLGII 220
              +G++
Sbjct: 121 ARCIGLL 127


>gi|304438325|ref|ZP_07398266.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304368691|gb|EFM22375.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 321

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 13/193 (6%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L    A    + +   A+ V  A+E IH  SL+HDD+  +D    RRG  T 
Sbjct: 38  GGKRLRPALFLLAARGGASFDRARAMPVAVALELIHTASLVHDDV--IDEADTRRGAETT 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166
           + ++    AI++G+ +   AF++++         ++ + L+ +L+    LQ     Q+  
Sbjct: 96  NAKWGNQIAILSGDYIFARAFKLVAEEGYDSSVYVKLAHLVCTLSEGEILQDHTVYQIPT 155

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            +D + +        + KT   +   CE G  +   S  +  ++  +G ++G+ FQ+ DD
Sbjct: 156 GEDAYYERI------RKKTADFLEICCELGGFIGGMSPADTAQMAEYGRDIGMAFQITDD 209

Query: 227 LLD---CEEDLPK 236
           LLD     ED+ K
Sbjct: 210 LLDFRRSSEDIGK 222


>gi|75907691|ref|YP_321987.1| polyprenyl synthetase [Anabaena variabilis ATCC 29413]
 gi|75701416|gb|ABA21092.1| Polyprenyl synthetase [Anabaena variabilis ATCC 29413]
          Length = 323

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L++    L         R+    E IH  SL+HDD+  +D   +RRG P
Sbjct: 44  GGKRIRPAIVLLISRATMLEQDITPRHRRLAEITEMIHTASLVHDDV--VDESEVRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH  +    AI+AG+ L   +   +++        + S++++ L      QG      L
Sbjct: 102 TVHSLFGNRIAILAGDFLFAQSSWYLANLDNLQVVKLLSEVIMDLATGEIQQG------L 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  I           KT +L+  + ++  +++  S    E L  +G +LGI FQ+ D
Sbjct: 156 NRFDASISIENYIEKSYYKTASLIANSSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|242309903|ref|ZP_04809058.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523200|gb|EEQ63066.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 306

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 12/156 (7%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A IE I   SL+HDD+  +DN  +RR KP+++    +  AI+ G+ L + AF       T
Sbjct: 56  AIIEMIQSASLLHDDV--IDNATMRRSKPSINAIAGDKNAIMLGDILYSKAF----CELT 109

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCFAC 193
           Q ++N    ++  +  N  +  +  G+M D++   +F  +E +   + + KT +L+    
Sbjct: 110 QFQENF--PMIPRIVAN-AVTTLAIGEMEDVELAKQFNANEAKYLTMVEHKTASLIESTA 166

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + A ++  +Q E +  R +G NLGI FQ+ DD+LD
Sbjct: 167 YAAAFLSGRNQEEAKSFRIYGRNLGIAFQIIDDVLD 202


>gi|167039330|ref|YP_001662315.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
 gi|256752210|ref|ZP_05493075.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913970|ref|ZP_07131287.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
 gi|307725346|ref|YP_003905097.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
 gi|166853570|gb|ABY91979.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
 gi|256748938|gb|EEU61977.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890655|gb|EFK85800.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
 gi|307582407|gb|ADN55806.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
          Length = 322

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK +R   V         +    L + AAIE +H  +L+HDD+  +DN  IRR KPT+ 
Sbjct: 44  SGKMLRPAFVILAGKFGEYDRKKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQ 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--QGMLGGQMLD 166
            +Y +  A+  G+ L + +F ++S       DNI    +  ++  +    +G +G Q   
Sbjct: 102 AEYGKDYAVFIGDFLFSESFLLLS-------DNIAISNLKKVSKVVSKICKGEIG-QFES 153

Query: 167 IQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            ++  ID T    ++++  KT AL   +   GA  +   +N  + L   G N+G+ FQ+ 
Sbjct: 154 RRN--IDITINDYLRRIAAKTAALFALSFYVGAYESKCDENLAKALGSIGYNIGMAFQII 211

Query: 225 DDLLD 229
           DD+LD
Sbjct: 212 DDILD 216


>gi|313884478|ref|ZP_07818239.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620262|gb|EFR31690.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 328

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 27/230 (11%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLF 65
           LQ N K++  ++D  ++  A+   TQ    L +A      GGK +R    FL TE     
Sbjct: 11  LQANIKQVQALIDQRVV-VANPQITQAVQALNAA------GGKFLRPAFFFLFTEFGPRV 63

Query: 66  --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +      L+V A++E +H  +LIHDD+  +D+  +RR + T+  ++ +  A+  G+ L
Sbjct: 64  KDHTQKEKLLKVAASLEILHIATLIHDDI--IDDSPLRRSQVTIQAKFGKDVAVYTGDLL 121

Query: 124 LTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QMLDIQDEFIDETQVFMIQ 181
            T  FE+I  + +T     I +Q M  +     L G L   Q+   QD+ ID+     +Q
Sbjct: 122 FTIFFELILETMQTSDYMAINAQAMKKI-----LMGELDQMQLYYKQDQTIDD----YLQ 172

Query: 182 KM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +  KT AL   A + GA    A  +        G  +G+ FQ+ DD+LD
Sbjct: 173 AIAGKTAALFALAAQEGAYFGGADNHVVALAETIGHKIGMAFQILDDILD 222


>gi|167622844|ref|YP_001673138.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167352866|gb|ABZ75479.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 323

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +    + L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSILAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    T+LK     +++   T+ +    +L  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMM----TELKCLDVLEILADATNVLAEGEVL--QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLADSPIEVQTALAEYGKYLGTAFQLTDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|159039961|ref|YP_001539214.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
 gi|157918796|gb|ABW00224.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
          Length = 344

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 22/232 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++ GLP  +    + ++  L D +  +A    T+    LL A      GGK+ R  LV  
Sbjct: 21  VDAGLPDSVLRVLEGVEAALRDDV-ASADPFVTEAARHLLDA------GGKRFRPLLVAL 73

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++    AI+ G
Sbjct: 74  GAQFGDPTRAQVVPAAVVVELTHLATLYHDDV--MDEAPVRRGAPSANSRWTNSVAILVG 131

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF 178
           + L   A +I +   T+    ++++    L H         GQ+ +       +D     
Sbjct: 132 DYLFARAADISADLGTEAV-RLQARTFARLVH---------GQIAETVGPRPGVDPVAHH 181

Query: 179 M-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + +   KTG+L+  +   G +   A       L  +GE +G+ FQL+DDLLD
Sbjct: 182 LHVIAEKTGSLIATSARFGGLFGGADPRYVAALAGYGETIGVAFQLSDDLLD 233


>gi|13541093|ref|NP_110781.1| geranylgeranyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
 gi|14324478|dbj|BAB59406.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
          Length = 354

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 28/211 (13%)

Query: 38  RLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R++  IR Y   GGK++R   +     LF+           +IE    Y LIHDD+  +D
Sbjct: 41  RVIKIIRDYTEGGGKRLRPIFMILGYRLFSPEEKGIFDASISIELAQSYLLIHDDV--ID 98

Query: 97  NGYIRRGKPTVHIQYD--------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
              +RRGKP++HI+ +              E  AI+AG+   +YA E +       ++ +
Sbjct: 99  KSDVRRGKPSMHIRLEDAFVAGCPQSRSTAEGLAIVAGDLAESYAHEALLRSGFYSENLV 158

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFA-CESGA 197
           ++ L LS T  I + G   GQ LDI     D+F +E  +  +   KT           GA
Sbjct: 159 KADLELSKT--IEMTGY--GQFLDILSTTMDDF-NEGDLIRLHLWKTAKYTLEGPLAMGA 213

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           I++  ++ +   LR +G  LGI FQL DD+L
Sbjct: 214 ILS-GTEYDITALREYGRVLGIAFQLKDDIL 243


>gi|10801558|dbj|BAB16692.1| GGPP synthase 2 [Hevea brasiliensis]
          Length = 126

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 2/126 (1%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E TAI+AG+ LL+++FE +++    +  +   + +  L   +G 
Sbjct: 1   NDDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVAAATKNVSPDRVVRAIAELGSAVGA 60

Query: 157 QGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            G++ GQ++DI+ E    T   +  I   KT  L+  A   GAI+  A     ER+R + 
Sbjct: 61  AGLVAGQIVDIESEGKQVTLEDLEYIHINKTSKLLEAAVVCGAIIGGADDESTERVRKYA 120

Query: 215 ENLGII 220
             +G++
Sbjct: 121 RCIGLL 126


>gi|256375538|ref|YP_003099198.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255919841|gb|ACU35352.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 356

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 37/212 (17%)

Query: 45  YALLGGKKIRSFLVTEC--ASLFNVNHLTALRVGAAI---ECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R         A+  + +  +A RV  A+   E I   +LIHDDL  MD   
Sbjct: 46  FVLSGGKRVRPTFAWWGWRAAGGDPDQESAGRVLTAVSSLELIQACALIHDDL--MDASE 103

Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISS---PKTQLKD 140
            RRG+PT+H+Q+                    A++ G+  L +A +++ +   P   L+ 
Sbjct: 104 TRRGRPTIHVQFARRHRENSWLSSPEQFGLAAAVLIGDVALAWADDMLFAAGLPTDALQ- 162

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMC-FACESG 196
                  LSL        ML GQ LD+  +   +        I ++KT A         G
Sbjct: 163 ------RLSLPWRDMRTEMLAGQYLDVLTQARGDASADAALRIDRLKTAAYTVERPLHMG 216

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A +   S    E LR FG ++G+ FQL DDLL
Sbjct: 217 AAIGGGSAELIEGLRAFGRDIGVAFQLRDDLL 248


>gi|21223617|ref|NP_629396.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|256785271|ref|ZP_05523702.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289769163|ref|ZP_06528541.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|9968700|emb|CAC05969.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|289699362|gb|EFD66791.1| polyprenyl synthetase [Streptomyces lividans TK24]
          Length = 386

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 17/156 (10%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A  + ++      
Sbjct: 130 ELVHNFTLLHDDV--MDRDATRRHRPTAWTVFGDADAILAGDALQALALRLFAADPHPAS 187

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEF-IDETQVFMIQKMKTGALMCFA 192
               ++L   +        +  GQ  D        DE  +DET   ++ + KTGAL+  A
Sbjct: 188 AAAATRLADCVME------LCEGQHADTAMERRPPDEVTLDET--LVMAEAKTGALLGCA 239

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           C  GA+ A A+  + E L  FG   G+ FQL DD++
Sbjct: 240 CAVGALYAGAATEDVEALDAFGREAGMAFQLIDDVI 275


>gi|197104247|ref|YP_002129624.1| polyprenyl synthetase family protein [Phenylobacterium zucineum
           HLK1]
 gi|196477667|gb|ACG77195.1| polyprenyl synthetase family protein [Phenylobacterium zucineum
           HLK1]
          Length = 335

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
            K++R  L    A L      + L++ AA+E IH  +L+HDD+  +D+  +RRG+   H+
Sbjct: 55  AKRLRPLLTIAAARLAGARDDSCLKLAAAVEFIHTATLLHDDV--VDSSQLRRGRVAAHL 112

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   ++++ G+ L   AFE++    +     I ++    ++    LQ +     LD+  
Sbjct: 113 IWGAPSSVLVGDFLFARAFELMVGAGSMAALEILARASRVISEGEVLQ-LTRSHDLDLTQ 171

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           E   E     I   KT  L   A E+GA+ A AS      LR FG++LG+ FQL DD LD
Sbjct: 172 EVYIE-----IIGAKTAELFAAAAEAGAVAAGASPERCRALRRFGQDLGLAFQLVDDALD 226

Query: 230 CEED 233
              D
Sbjct: 227 YSGD 230


>gi|283954169|ref|ZP_06371694.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794448|gb|EFC33192.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 297

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 22/188 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GKK+RS L+   A    +    A ++ A+IE IH  SL+HDD+  +D   +RRG  +V+
Sbjct: 29  SGKKLRSKLLLAIAEESEI----AFKICASIELIHLASLLHDDI--IDESELRRGSRSVN 82

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L + AF  +S   T+   +I S  ++ L           G+++D+ 
Sbjct: 83  AEFGTKNALMLGDILYSKAFYELSKVDTRFA-SIISDAVVKLAI---------GELMDVN 132

Query: 169 --DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             ++F I++     +   KT  L+  +   GAI+A   + +      +G+NLG+ FQ+ D
Sbjct: 133 LGEKFNINKEAYLKMIYNKTAILIEASARCGAILARLHEKD---FAEYGKNLGLAFQMID 189

Query: 226 DLLDCEED 233
           D+LD + D
Sbjct: 190 DILDIKSD 197


>gi|3410887|dbj|BAA32241.1| decaprenyl diphosphate synthase [Gluconobacter oxydans]
          Length = 315

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 14/190 (7%)

Query: 49  GGKKIRSFLVTECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  L    A L       +H   + + A +E IH  +L+HDD+  +D   +RRG 
Sbjct: 30  GGKRLRPLLTLASARLCGYQPGPDHQRHVGLAACVEFIHTATLLHDDV--VDESTLRRGL 87

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            + +  +    +++ G+ L   +F+++++  +     I S    ++     LQ       
Sbjct: 88  ASANAVFGNKASVLVGDFLFARSFQLMTADGSLKVMAILSDASATIAEGEVLQ------- 140

Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           + +Q++     + ++ +   KT AL   AC  GA++A   + E+E L  FG NLG+ FQL
Sbjct: 141 MVVQNDLTTPVERYLEVIHGKTAALFAAACRVGAVVAERPEAEEEALERFGTNLGMAFQL 200

Query: 224 ADDLLDCEED 233
            DD LD   D
Sbjct: 201 VDDALDYAAD 210


>gi|46143904|ref|ZP_00133901.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209449|ref|YP_001054674.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           L20]
 gi|307258100|ref|ZP_07539852.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|126098241|gb|ABN75069.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|306863463|gb|EFM95394.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 331

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|88798952|ref|ZP_01114534.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297]
 gi|88778432|gb|EAR09625.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297]
          Length = 322

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  LV     L     + +HL A    A IE +H  +L+HDD+  +D   +RRG+
Sbjct: 43  GGKRMRPLLVLLAGQLNGQLTDRHHLLA----AIIEFLHTATLLHDDV--VDKSDMRRGR 96

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L   +FE++     +L +    Q +   T  I    ++  Q+
Sbjct: 97  ATANANWGNAPSVLVGDFLYARSFEML----VELGNFDVMQSLSQATRVIAEGEVM--QL 150

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +++++  I E Q   + K KT  L   + E+  +++   +     L  +G NLG+ FQL 
Sbjct: 151 MNVKNPDITEAQYMEVIKGKTAILFKASAETSGLISGYDRTSVNALADYGLNLGLAFQLI 210

Query: 225 DDLLDCEED 233
           DD LD   D
Sbjct: 211 DDALDYAGD 219


>gi|326524578|dbj|BAK00672.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 394

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 21/225 (9%)

Query: 16  IDTILDDLLLQTASHMQT---QHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNV 67
           +D + DDLL +  +++++     N  L+SA       GGK++R    FLV+   A +  +
Sbjct: 76  LDVVSDDLL-KLNNNLKSLIGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEVAGL 134

Query: 68  NHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           + LT    R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +  
Sbjct: 135 SELTTEHKRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRIAVLAGDFMFA 192

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
            +   +++ +      + SQ++    +  I  Q  L    + + D  +           K
Sbjct: 193 QSSWFLANLENIEVIKLISQVIKDFASGEIKQQSTLFDCDVTLDDYLLK-------SYYK 245

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T +L+  +  S AI +  S    E++  +G NLG+ FQ+ DD+LD
Sbjct: 246 TASLLASSTRSAAIFSGVSTTVCEQMYEYGRNLGLSFQVVDDILD 290


>gi|320007257|gb|ADW02107.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 367

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 76  GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 134 KVHGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTAS------RKLIDGQAQDIS 187

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 188 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVD 247

Query: 226 DLL 228
           DLL
Sbjct: 248 DLL 250


>gi|67921668|ref|ZP_00515186.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501]
 gi|67856780|gb|EAM52021.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501]
          Length = 323

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 22/213 (10%)

Query: 30  HMQTQHNDRLLSAIRYALLG----------GKKIRS--FLVTECASLFNVNHLTALRVGA 77
           H+ T +  RL+ A R+ +LG          GK+IR    L+   A++ ++   +  R  A
Sbjct: 16  HLLTDNLKRLVGA-RHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDLEITSRHRRLA 74

Query: 78  AI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            I E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +++   
Sbjct: 75  EITEMIHTASLVHDDV--VDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDN 132

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                + S+++         QG+         + ++D++        KT +LM  + +S 
Sbjct: 133 LQVVKLLSEVIRDFAEGEIFQGINRFDTSLTLEAYLDKSY------YKTASLMANSSKSA 186

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AI++ AS    + L  +G+ LG+ FQ+ DD+LD
Sbjct: 187 AILSDASAEVIDSLYNYGKYLGLAFQIVDDILD 219


>gi|289580127|ref|YP_003478593.1| dimethylallyltranstransferase [Natrialba magadii ATCC 43099]
 gi|289529680|gb|ADD04031.1| Dimethylallyltranstransferase [Natrialba magadii ATCC 43099]
          Length = 349

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSF--------------LVTECASLFNVN--HLTA 72
            +  Q  +RL  A RY L  GGK++R                L T+  S   ++   +  
Sbjct: 29  ELPVQQPERLYEASRYLLDAGGKRLRPAVLLAAAEALADVEPLSTDYRSFPTLSGEEIDM 88

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    ++E I  ++LIH     MD+  +RRG P VH +YD  TAI+AG+ L + AFEI+ 
Sbjct: 89  MDAAVSVEVIQSFTLIH--DDIMDDDDLRRGVPAVHREYDLETAILAGDTLYSKAFEIML 146

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGAL 188
                    + +  +L+ T       +  GQ LD+    +D    E  + M+++ KT  L
Sbjct: 147 ETGADPSRMVDALDVLATTCT----KICEGQALDVTFEKRDNVAPEEYLEMVEQ-KTAVL 201

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              +    AI+  A Q   + L  +G ++G  FQ+ DD+LD
Sbjct: 202 YAASACLPAILQGADQETIDALYGYGLDIGRAFQIQDDVLD 242


>gi|110669136|ref|YP_658947.1| multifunctional long-chain (E)-prenyl diphosphate synthase
           [Haloquadratum walsbyi DSM 16790]
 gi|109626883|emb|CAJ53352.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase
           [Haloquadratum walsbyi DSM 16790]
          Length = 271

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 13/188 (6%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           AL GGK++R  +              A+    A+E +H  SL+ DD+  +D   +RRG  
Sbjct: 26  ALSGGKRVRPAVTILACEACGGAPEDAVDFAVAVELVHNASLVVDDI--IDRSDVRRGTE 83

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +    +    A+IA +GLL  AF ++++ +   +  I ++ M+ L           G+  
Sbjct: 84  SAWSAFGHGPALIASDGLLGEAFALLAADEHATE--IVAESMVELGE---------GEAT 132

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           ++     +E +   + + KTGAL   + E GA+   A     +    + E +G+ FQ+ D
Sbjct: 133 ELVARPTNEAEYMQLARRKTGALFRASAEVGAVAGGADPFTIDLFGEYAERVGVAFQIRD 192

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 193 DVLDATAD 200


>gi|254173799|ref|ZP_04880471.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4]
 gi|214032491|gb|EEB73321.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4]
          Length = 306

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 11/181 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A    +    AL + +AIE IH  SL+HDD+  +D    RR  PTV 
Sbjct: 30  GGKRIRPRITLAVAKGLGLEEKDALDLASAIELIHTASLVHDDV--IDLAEKRRNNPTVV 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +++    A+++G+ L   A  II+  K ++ D +   +   +   I  + + G   LD++
Sbjct: 88  MRWGPELAVLSGDFLFVRALRIIAGKKVEMVDYVAKVVEDMVKAEILQEAVRGSVHLDLE 147

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                    + I   KTG L  F         +  +   E L   G  +G  FQ+ DD+L
Sbjct: 148 -------TYYRIIDGKTGRL--FGASFALPAYYHGKTYWEELDRAGTLVGRAFQIVDDVL 198

Query: 229 D 229
           D
Sbjct: 199 D 199


>gi|53726074|ref|YP_104070.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344]
 gi|121600728|ref|YP_991797.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1]
 gi|124384831|ref|YP_001027290.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229]
 gi|126441901|ref|YP_001060502.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668]
 gi|126448324|ref|YP_001082773.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247]
 gi|52429497|gb|AAU50090.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344]
 gi|121229538|gb|ABM52056.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1]
 gi|124292851|gb|ABN02120.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229]
 gi|126221394|gb|ABN84900.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668]
 gi|126241194|gb|ABO04287.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247]
          Length = 330

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPALLLLVAGALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|190151351|ref|YP_001969876.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251769|ref|ZP_07337940.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307246933|ref|ZP_07528998.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249070|ref|ZP_07531077.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251268|ref|ZP_07533189.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255915|ref|ZP_07537716.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307260368|ref|ZP_07542075.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307264706|ref|ZP_07546286.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189916482|gb|ACE62734.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302649199|gb|EFL79384.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306852218|gb|EFM84458.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306854358|gb|EFM86554.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306856784|gb|EFM88919.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861183|gb|EFM93176.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865619|gb|EFM97500.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306870018|gb|EFN01782.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 331

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|226360248|ref|YP_002778026.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4]
 gi|226238733|dbj|BAH49081.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4]
          Length = 385

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 31/209 (14%)

Query: 45  YALLGGKKIR-SFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R +F  T                 LR  +A+E +   +L+HDD+  +D   
Sbjct: 70  FVLRGGKRVRPAFAWTGWLGAGGDPRGPGAGPVLRACSALELVQACALVHDDI--IDAST 127

Query: 100 IRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG PTVH++++E                  AI+ G+  L +A ++I         + R
Sbjct: 128 TRRGFPTVHVEFEEQHRAGRWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDQSAR 187

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIM 199
              + S         +LGGQ LDI +E   +  +    K+       +  E     GA +
Sbjct: 188 ISPVWSAMRT----EVLGGQFLDISNEVRADESIDAAMKVNRYKTAAYTIERPLHLGAAL 243

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228
           A A  +     R FG ++GI FQL DDLL
Sbjct: 244 AGADDSLVSAYRRFGTDIGIAFQLRDDLL 272


>gi|291009770|ref|ZP_06567743.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 274

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 19/161 (11%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H +SL+HDD+  MD    RR +PTV   +    AI+AG+ +L  A  I+S+      
Sbjct: 24  ELLHNFSLLHDDV--MDGDLTRRHRPTVWSLFGTSNAILAGDAILGLAPRILSATG---- 77

Query: 140 DNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFA 192
               S+  L+     G  +  +  GQ  DI   F +   V       + + KTG L+  +
Sbjct: 78  ----SEHALTAIDWFGKCVVKLCEGQAADIS--FSERVDVGIDACVAMARAKTGELLGTS 131

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           C  G + A A + +   LR FG  +G+ FQL DDLL    D
Sbjct: 132 CALGGLFAGADRTQITALREFGSEIGLAFQLVDDLLGIWGD 172


>gi|165977439|ref|YP_001653032.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165877540|gb|ABY70588.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 331

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|238561270|ref|ZP_00442352.2| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4]
 gi|251766623|ref|ZP_04819732.1| polyprenyl synthetase [Burkholderia mallei PRL-20]
 gi|254178909|ref|ZP_04885563.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399]
 gi|254202791|ref|ZP_04909154.1| polyprenyl synthetase [Burkholderia mallei FMH]
 gi|254208133|ref|ZP_04914483.1| polyprenyl synthetase [Burkholderia mallei JHU]
 gi|254357663|ref|ZP_04973937.1| polyprenyl synthetase [Burkholderia mallei 2002721280]
 gi|147747038|gb|EDK54115.1| polyprenyl synthetase [Burkholderia mallei FMH]
 gi|147752027|gb|EDK59094.1| polyprenyl synthetase [Burkholderia mallei JHU]
 gi|148026727|gb|EDK84812.1| polyprenyl synthetase [Burkholderia mallei 2002721280]
 gi|160694823|gb|EDP84831.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399]
 gi|238524982|gb|EEP88412.1| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4]
 gi|243065293|gb|EES47479.1| polyprenyl synthetase [Burkholderia mallei PRL-20]
          Length = 332

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPALLLLVAGALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 111 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 165 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|262341076|ref|YP_003283931.1| polyprenyl synthetase family protein [Blattabacterium sp.
           (Blattella germanica) str. Bge]
 gi|262272413|gb|ACY40321.1| polyprenyl synthetase family protein [Blattabacterium sp.
           (Blattella germanica) str. Bge]
          Length = 325

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)

Query: 33  TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           T+ N  L+  I + ++   GK IR   V   A +              IE IH  +L+HD
Sbjct: 27  TKSNVSLIDQITHYIIHRKGKLIRPIFVFLIAKMLGNIQKKTYHTACLIELIHTATLVHD 86

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +DN  +RRG  +++  +    A++ G+ LL+ +  + +       +N    L+  +
Sbjct: 87  DV--IDNSSLRRGSFSINAIWKNKIAVLIGDYLLSKSLLLAT-------NNNYYDLLKII 137

Query: 151 THNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              I  + M  G++L +++     I E     I   KT +L+  +CE GA   +  +   
Sbjct: 138 CQTI--KDMSEGELLQMEESDKLNITEKTYNQIIYHKTASLIAASCECGARSVNVDEKTA 195

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
            ++R FG  +GI FQ+ DDL D EE
Sbjct: 196 LKMRKFGLFVGIAFQIKDDLFDYEE 220


>gi|310658722|ref|YP_003936443.1| farnesyltransferase [Clostridium sticklandii DSM 519]
 gi|308825500|emb|CBH21538.1| putative Farnesyltransferase [Clostridium sticklandii]
          Length = 311

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 6/163 (3%)

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           H  A+ +  AIE  H  +L+HDD+  +D+   RRG  ++  ++D+ TA+I G+ +L  A 
Sbjct: 58  HEDAINLAVAIELFHLATLVHDDI--IDDSPKRRGMDSLQSRFDKKTAVICGDYILAMAI 115

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E+  + K  +KD  +   + +   ++ L  ++  Q  ++ +  +   +   I + KT AL
Sbjct: 116 EL--ALKVDIKDEYKKYSLANYAKSVCLGELM--QDTNLFNYNLSLKRYLTIIRGKTAAL 171

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              A  SGAI+    ++  +  +  G  +G+IFQ++DD +D E
Sbjct: 172 FEAAFVSGAIVLGEPKSNVDLYKNIGRYIGMIFQMSDDCMDYE 214


>gi|111018119|ref|YP_701091.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1]
 gi|110817649|gb|ABG92933.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1]
          Length = 330

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 31/209 (14%)

Query: 45  YALLGGKKIR-----SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R     +  V         +    LR  +A+E +   +L+HDD+  +D   
Sbjct: 15  FVLRGGKRVRPAFAWTGWVGAGGDARGPDAGPVLRACSALELVQACALVHDDI--IDAST 72

Query: 100 IRRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG PTVH+++                 E  AI+ G+  L +A ++I         + R
Sbjct: 73  TRRGFPTVHVEFAEQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDASAR 132

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIM 199
              + S         +LGGQ LDI +E   +  +    K+       +  E     GA +
Sbjct: 133 ISPVWSAMRTE----VLGGQFLDISNEARADESIVAAMKVNRYKTAAYTIERPLHLGAAL 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228
           A A        R FG ++GI FQL DDLL
Sbjct: 189 AGADDTLVSAYRRFGTDIGIAFQLRDDLL 217


>gi|114319994|ref|YP_741677.1| trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226388|gb|ABI56187.1| Trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 322

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A          +++ A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLAARAAGYRGEHHIKLAAVVEFIHTATLLHDDV--VDESTLRRGQDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L T AFE++     ++      Q+M   T+ I    ++  Q+L+  
Sbjct: 101 SIWGNEAAVLVGDFLYTRAFEMM----VEVGLLPIMQVMARTTNTIAEGEVM--QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   +   KT +L   AC  G  +A   Q + + L  +G +LG  +QL DD L
Sbjct: 155 DPDVSEARYRDVIYRKTASLFEAACCLGGTIAGLPQAQTDHLAAYGLHLGTAYQLVDDAL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|254230032|ref|ZP_04923431.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
 gi|151937420|gb|EDN56279.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
          Length = 287

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 7   GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 64

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   N+  +G +  Q+++  
Sbjct: 65  AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSNAVNVIAEGEVQ-QLMNCN 118

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  ++ +G+ LG  FQL DD++
Sbjct: 119 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 178

Query: 229 DCEED 233
           D   D
Sbjct: 179 DYTSD 183


>gi|303250376|ref|ZP_07336575.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307253685|ref|ZP_07535552.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650846|gb|EFL81003.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306858921|gb|EFM90967.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 331

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTDV-----DSLEVLKVMSAATNALAEGEVQ-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|302541341|ref|ZP_07293683.1| polyprenyl synthetase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458959|gb|EFL22052.1| polyprenyl synthetase [Streptomyces himastatinicus ATCC 53653]
          Length = 365

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +    +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 72  GGKAVRPALALLSAQAAGADPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T        +L  S T       ++ GQ  DI 
Sbjct: 130 KVHGPAQAILVGDALFALAGEILLELGTAEAGRATRRLT-SATRK-----LIDGQAQDIS 183

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 184 YEHRERVTVEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVD 243

Query: 226 DLL 228
           D+L
Sbjct: 244 DVL 246


>gi|319443088|ref|ZP_07992244.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile
           DSM 44702]
          Length = 338

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 26/231 (11%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRY--------ALLGGKKIR---SFLVTECASLF 65
           D  L+D + +  + +++   D L +   +        AL GGK+ R   + L +   S  
Sbjct: 16  DAALNDFIAEGMTRVESTLQDSLSTGESFLTDKVQHLALAGGKRFRPMFALLASRYGSTP 75

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                T +     +E  H  +L HDD+  MD    RRG  + + ++D   AI+AG+ +  
Sbjct: 76  ETAAQTVVNAAVVVELTHLATLYHDDV--MDEADRRRGSESANARWDNSVAILAGDFIFA 133

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM-IQK 182
            A  I++        ++  + +       G   ++ GQM +     E  D    +M + +
Sbjct: 134 VASSIMA--------DLGPETVRHFAETFG--ELVTGQMRETVGCPEGEDPVDHYMTVIQ 183

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KTG L+  A   G++   A   +++ L  FG +LG +FQ+ DD++D   D
Sbjct: 184 EKTGVLIASAGFLGSMHGGAPVEQRDALFRFGRHLGQVFQIVDDIIDVWSD 234


>gi|17227592|ref|NP_484140.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120]
 gi|17135074|dbj|BAB77620.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120]
          Length = 323

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L++    L         R+    E IH  SL+HDD+  +D   +RRG P
Sbjct: 44  GGKRIRPAIVLLISRATMLDQGITPRHRRLAEITEMIHTASLVHDDV--VDESEVRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH  +    AI+AG+ L   +   +++        + S++++ L      QG      L
Sbjct: 102 TVHSLFGNRIAILAGDFLFAQSSWYLANLDNLQVVKLLSEVIMDLATGEIQQG------L 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  I           KT +L+  + ++  +++  S    E L  +G +LGI FQ+ D
Sbjct: 156 NRFDASISIETYIEKSYYKTASLVANSSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|300362327|ref|ZP_07058503.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri
           JV-V03]
 gi|300353318|gb|EFJ69190.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri
           JV-V03]
          Length = 338

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 13/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S 
Sbjct: 82  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 138

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLNQIKGKTGVLFG 191

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC  GA  +     +  + + FGE LG  FQL DD+LD
Sbjct: 192 LACFIGAYESGIKVTKALKAKQFGEYLGQAFQLRDDILD 230


>gi|6706999|gb|AAF25540.1|AF104994_10 geranyl transferase [Streptomyces coelicolor A3(2)]
          Length = 386

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 17/156 (10%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A  + ++      
Sbjct: 130 ELVHNFTLLHDDV--MDRDATRRHRPTAWTVFGDADAILAGDALQALALRLFAADPHPAS 187

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEF-IDETQVFMIQKMKTGALMCFA 192
               ++L   +        +  GQ  D        DE  +DET   ++ + KTGAL+  A
Sbjct: 188 AAAATRLADCVME------LCEGQHADTAMERPPPDEVTLDET--LVMAEAKTGALLGCA 239

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           C  GA+ A A+  + E L  FG   G+ FQL DD++
Sbjct: 240 CAVGALYAGAATEDVEALDAFGREPGMAFQLIDDVI 275


>gi|302795999|ref|XP_002979762.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii]
 gi|300152522|gb|EFJ19164.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii]
          Length = 415

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 35/248 (14%)

Query: 4   GLPSKLQENSKR--------IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKK 52
           G+ S +Q   +R        I+ +  DL  L Q    +    N  L+SA       GGK+
Sbjct: 77  GVASYVQRRERREKLSLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKR 136

Query: 53  IRS---FLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           +R    FLV+      +  N  HL   R+    E IH  SLIHDD+  +D   +RRGK T
Sbjct: 137 MRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKET 194

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQM 164
           VH  Y    A++AG+ +   +   +++      DN+    ++S        G +     +
Sbjct: 195 VHQLYGTRIAVLAGDFMFAQSSWYLAN-----LDNLEVIKLISQVIKDFASGEIQQASSL 249

Query: 165 LDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            D     D ++D++        KT +L+  +  S AI + A  +  +++  +G+ LG+ F
Sbjct: 250 FDSDITLDNYLDKSY------YKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAF 303

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 304 QIVDDILD 311


>gi|297624850|ref|YP_003706284.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093]
 gi|297166030|gb|ADI15741.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093]
          Length = 315

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 16/220 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRY--------ALLGGKKIRSFLVTECASLFNVNHLTAL 73
           DL+ Q  S  + +  + L S + +           GGK++R  L      L       A+
Sbjct: 3   DLIQQDLSDFEARLTEELYSPVEFIGAIGEDLVHAGGKRLRPSLAFLTGRLLGAEREAAM 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           RV  A+E +H  SL+HDDL  +D+   RRG      +Y  V ++++G+ +L     I++ 
Sbjct: 63  RVALAVELLHSASLLHDDL--IDDASTRRGVVAAFRRYGNVVSVMSGDFMLARVLGILAE 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   + S+    +     LQ     QM  ++   ++      I + KT  L+  A 
Sbjct: 121 ADAPSFTRLMSETAARICEGEVLQF----QMASLETYSLEHYNT--IIEGKTAVLLAAAT 174

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           E  A++A A+   +  LR FG + G  FQ+ DDLLD   D
Sbjct: 175 EGVALLAGAAPGARRALRAFGLHYGRAFQMRDDLLDLMSD 214


>gi|256831793|ref|YP_003160520.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
 gi|256685324|gb|ACV08217.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
          Length = 336

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 19/227 (8%)

Query: 14  KRIDTILDDLLLQTASHMQ--TQHNDRLL--SAIRYALLGGKKIRSFLVTECASLFNVNH 69
           +++ T L + L     H++  T H D ++  ++   A  GGK++R  L    A +    +
Sbjct: 13  EKLATALTEELQHVEEHLRSATSHADTVVNEASQHLANAGGKRLRPLLTLLAAHVGQGVN 72

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
               +    +E  H  SL HDD+  MD+  +RRG P+ H  +    AI+ G+ L   A  
Sbjct: 73  DDVRQAALVVELTHLASLYHDDV--MDSAPLRRGAPSAHEVWGNSVAILTGDLLFARASR 130

Query: 130 IISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           ++++  P+   ++     +L L   H     G+  G   D  + +I       +   KT 
Sbjct: 131 LVANLGPEAVHIQAVTFERLCLGQLHET--MGVRDGD--DPVEHYIG------VLADKTA 180

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +L+  +   GA  A A    ++ L  +GEN+G+ FQLADD++D   D
Sbjct: 181 SLLATSALLGAKFAGADHGIQQALARYGENVGVAFQLADDIIDLTSD 227


>gi|31747831|gb|AAO38414.1| Lfe206p1 [Leptospirillum ferrooxidans]
          Length = 150

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 151 THNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            H  GL GM+GGQMLD++ E   I    +  + + KTGAL+  +   GA++    ++E  
Sbjct: 1   AHGSGLSGMVGGQMLDMESEGRKISLDDLEFLHRHKTGALILSSVRIGALLGQGGESEMR 60

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L  +GE +G+ FQ+ADDLLD E D
Sbjct: 61  SLDQYGEAVGVAFQIADDLLDVEGD 85


>gi|15673324|ref|NP_267498.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis Il1403]
 gi|12724324|gb|AAK05440.1|AE006366_9 heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406878|gb|ADZ63949.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis CV56]
          Length = 319

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R   +   +   +++    L + A++E +H  +L+HDD+  +D+   RRG  T+ 
Sbjct: 47  GGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLS 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            +Y    A+ AG+ L    F ++S    +L +         LT NIG ++ +LGG++  +
Sbjct: 105 AKYGPEIAVYAGDYLFIAVFRLMSEHSLELSN---------LTKNIGSIERLLGGELGQL 155

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              F + +T    I+ +  KTG L   +     +++  +   K R    G N+GI FQ+ 
Sbjct: 156 NHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNTLTK-RAYKIGMNIGISFQIM 214

Query: 225 DDLLD 229
           DD LD
Sbjct: 215 DDYLD 219


>gi|288917476|ref|ZP_06411842.1| Farnesyltranstransferase [Frankia sp. EUN1f]
 gi|288351179|gb|EFC85390.1| Farnesyltranstransferase [Frankia sp. EUN1f]
          Length = 860

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 10/211 (4%)

Query: 27  TASHMQTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           T+   +T  +D  L AIR   LGG  K++R  L    A    V       + AA E  H 
Sbjct: 585 TSQPAETSPHD--LDAIRAYALGGHAKRLRPVLTLMLAEGLRVPTRAIEPLLAASELFHT 642

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+ DDLP+ DN   RRG+PT H  +DE +  +A   +++  F  ++            
Sbjct: 643 ASLLLDDLPAQDNATTRRGRPTAHRVFDEGSVQLAAVSMISSGFGQLARLHEHFPPVRVV 702

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFACESGAI 198
           +++      +G + +  GQ LD+       D  +  T +  + ++K+   +  A     +
Sbjct: 703 EVVAYAGSTLGPERLCRGQNLDLHLARRADDRPVTGTDILEMYRLKSSTSIEAALVPLMM 762

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +      E   +  +  + GI+FQ+ DD+LD
Sbjct: 763 LLGRPDREISLVERYARHAGIVFQIRDDVLD 793


>gi|254385932|ref|ZP_05001250.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
 gi|194344795|gb|EDX25761.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
          Length = 364

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 73  GGKAVRPALALLSAEAAGAAAEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 130

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 131 KVHGPAQAILVGDALFALANEVLLELGTVEAGRAARRLTTAT------RKLIDGQAQDIS 184

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     ++L  +G +LG+ FQ  D
Sbjct: 185 YEHRERVSVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVD 244

Query: 226 DLL 228
           DLL
Sbjct: 245 DLL 247


>gi|302543420|ref|ZP_07295762.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302461038|gb|EFL24131.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Streptomyces himastatinicus ATCC 53653]
          Length = 335

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +RRG  + +
Sbjct: 53  GGKRFRPLLVLLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVSSAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L   A  +++    +    +R Q           + ++ GQ+L+  
Sbjct: 111 ARWGNSVAVLTGDFLFARASHVLADLGPE---AVRVQAE-------AFERLVTGQILETA 160

Query: 169 -DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                D  + ++ +   KTG+L+  +   GA+M+ A ++    L  +GE LG+ FQLADD
Sbjct: 161 GPRGRDPIEHYLDVLAGKTGSLIAVSGRFGAMMSGADESIVNILTQYGERLGMAFQLADD 220

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 221 VLDIASD 227


>gi|224061363|ref|XP_002300442.1| predicted protein [Populus trichocarpa]
 gi|222847700|gb|EEE85247.1| predicted protein [Populus trichocarpa]
          Length = 420

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 30/241 (12%)

Query: 8   KLQENSKR-------IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS-- 55
           KL+++S+         + + DDL  L Q    +    N  L+SA       GGK++R   
Sbjct: 87  KLKKDSRESISITNLFEVVADDLQTLNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPAL 146

Query: 56  -FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            FLV+   A +  +  LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y
Sbjct: 147 VFLVSRATAEVVGMKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLY 204

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
               A++AG+ +   +   ++        N+ +  ++ L   + ++    G++      F
Sbjct: 205 GTRVAVLAGDFMFAQSSWYLA--------NLENIEVIKLISQV-IKDFASGEIKQASSLF 255

Query: 172 ---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              ++  +  +    KT +L+  + +  AI +    +   ++  +G+NLG+ FQ+ DD+L
Sbjct: 256 DCDVELEEYLIKSYYKTASLIAASTKGAAIFSGVDSSVSMQMYDYGKNLGLSFQVVDDIL 315

Query: 229 D 229
           D
Sbjct: 316 D 316


>gi|51209963|ref|YP_063627.1| prenyl transferase [Gracilaria tenuistipitata var. liui]
 gi|50657717|gb|AAT79702.1| prenyl transferase [Gracilaria tenuistipitata var. liui]
          Length = 323

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 13/185 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+IR  ++   A L     L  L    R+    E IH  SL+HDD+  +D   IRRG 
Sbjct: 44  GGKRIRPTIILLVA-LSTTQALHILPEHKRLAEITEIIHTASLVHDDV--IDECEIRRGV 100

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            TVH  +    A++AG+ L   +   +++          S+++         QG      
Sbjct: 101 NTVHNAFSTKVAVLAGDFLFAQSSWYLANLNNLEVVKTISKVITDFAEGEIRQG------ 154

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L   DE I           KT +L+  +C++ AI++  + N + +   +G++LG+ FQ+ 
Sbjct: 155 LTCFDETISMNNYIEKSFYKTASLIASSCKAAAILSDTTTNTQNQFYLYGKHLGLAFQIV 214

Query: 225 DDLLD 229
           DD+LD
Sbjct: 215 DDILD 219


>gi|325106523|ref|YP_004276177.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
 gi|324975371|gb|ADY54355.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
          Length = 323

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 14/229 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLF 65
           KL E  K I+  +D    +  + M++  +  LL  I + ++   GK+IR   V   A++ 
Sbjct: 3   KLDEIKKPIEKEIDAFEEKFKASMKS--SVPLLDRITHYIVKRKGKQIRPMFVFFSANIS 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                +       +E +H  +L+HDD+  +DN + RRG  +V+  +    A++ G+ LL 
Sbjct: 61  GGITESTYHAATFVELLHTATLVHDDV--VDNSFERRGFFSVNALWKNKIAVLVGDYLLA 118

Query: 126 YAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
               ++S    + K   I S  +  L+    LQ M   + +DI +E       + + + K
Sbjct: 119 KGL-LLSVDHQEFKQLKIVSDAVQQLSEGELLQ-MEKVRRMDISEEV-----YYEVIRKK 171

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T +L+   C +G+  A A+    +++  FGE +GI FQ+ DDL D   D
Sbjct: 172 TASLIASCCAAGSTSAGATDEIVKKMHDFGEKIGIAFQIKDDLFDFGTD 220


>gi|13383253|dbj|BAB39477.1| putative GGPP synthase 2 [Youngia japonica]
          Length = 127

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT H  Y E  A++AG+ L  +AF+ I+S             +  L  +IG 
Sbjct: 1   NDDFRRGKPTNHKVYGEDVAVLAGDSLFAFAFQHIASATVGASPARVLAAVGELAKSIGT 60

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI    + +    Q+  I   KT AL+  A   GAI+   S  + E LR F
Sbjct: 61  EGLVAGQVVDIASTGVKDVGLEQLEFIHIHKTAALLEAAVVLGAILGGGSDTQVEELRTF 120

Query: 214 GENLGII 220
              +G++
Sbjct: 121 ARCIGLL 127


>gi|86131693|ref|ZP_01050290.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
 gi|85817515|gb|EAQ38689.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
          Length = 325

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 18/186 (9%)

Query: 50  GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R   V   A + N   VN  T  R  + IE IH  SL+HDD+  +D+  +RR   +
Sbjct: 45  GKQMRPMFVFLTAKMMNSGEVNDRT-YRGASVIELIHTASLVHDDV--VDDSNMRRSFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++  +    A++ G+ L +    ++S       DN  + L+  ++  + ++ +  G++L 
Sbjct: 102 LNALWKNKIAVLVGDFLFSKGL-LLSI------DNGDTDLLQIIS--VAVREISEGELLQ 152

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+      I E   + I + KT  L+   C  GA   HA   E +R+  FGE +G+ FQ+
Sbjct: 153 IEKARKLDITEELYYEIIRQKTATLIAACCAMGAQAVHAKGKEVKRMHKFGELIGMAFQI 212

Query: 224 ADDLLD 229
            DDL D
Sbjct: 213 KDDLFD 218


>gi|333029492|ref|ZP_08457553.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011]
 gi|332740089|gb|EGJ70571.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011]
          Length = 324

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 17/202 (8%)

Query: 33  TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T  N  L+ AIR+     GK +R  LV   A LF       L    ++E +H  SL+HDD
Sbjct: 27  TSSNPLLMRAIRHIRKSNGKMMRPILVLLLAKLFGSIKTNTLYSAVSLELLHTASLVHDD 86

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RRG+ +V+  ++   +++ G+ LL  A  ++    T+  D      ++ + 
Sbjct: 87  V--VDESDERRGQLSVNALFNNKVSVLVGDFLL--ATSLVQVGLTRDCD------IIDVV 136

Query: 152 HNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            ++G Q +  G++L + +    EF ++    +I K KT AL     +  A+ A AS+   
Sbjct: 137 AHLG-QNLADGEILQLSNVSNKEFSEDVYYSVIYK-KTAALFAACAKVAALSAGASKESV 194

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
                FGE LGI FQ+ DD+ D
Sbjct: 195 IEATKFGEYLGICFQIKDDIFD 216


>gi|219964684|gb|ACL68406.1| polyprenyl diphosphate synthase [Streptomyces peucetius ATCC 27952]
          Length = 314

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 23  GGKAVRPALALLSAEAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 80

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T ++    ++ + + T       ++ GQ  DI 
Sbjct: 81  KVHGPAQAILVGDALFALANEVLLEIGT-VEAGRATRRLTTATRK-----LIDGQAQDIS 134

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 135 YEHRERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLESYGYHLGLAFQAVD 194

Query: 226 DLL 228
           DLL
Sbjct: 195 DLL 197


>gi|125623941|ref|YP_001032424.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|124492749|emb|CAL97704.1| similar to heptaprenyl diphosphate synthase component II
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070715|gb|ADJ60115.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. cremoris NZ9000]
          Length = 319

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R   +   +   +++    L + A++E +H  +L+HDD+  +D+   RRG  T+ 
Sbjct: 47  GGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLS 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            +Y    A+ AG+ L    F ++S    +L +         LT NIG ++ +LGG++  +
Sbjct: 105 AKYGPEIAVYAGDYLFIAVFRLMSEHSLELSN---------LTKNIGSIERLLGGELGQL 155

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              F + +T    I+ +  KTG L   +     +++  +   K R    G N+GI FQ+ 
Sbjct: 156 NHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNALTK-RAYKIGMNIGISFQIM 214

Query: 225 DDLLD 229
           DD LD
Sbjct: 215 DDYLD 219


>gi|268318920|ref|YP_003292576.1| hypothetical protein FI9785_426 [Lactobacillus johnsonii FI9785]
 gi|262397295|emb|CAX66309.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 350

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 13/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S 
Sbjct: 94  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 151 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFG 203

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC  GA  +        + + FGE LG  FQL DD+LD
Sbjct: 204 LACFIGAYESGLKVTRALKAKKFGEYLGQAFQLRDDILD 242


>gi|218196351|gb|EEC78778.1| hypothetical protein OsI_19015 [Oryza sativa Indica Group]
          Length = 414

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 23/229 (10%)

Query: 13  SKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLF 65
           S  ++ + DDLL        +    N  L+SA       GGK++R    FLV+   A L 
Sbjct: 93  SSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELA 152

Query: 66  NVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +  LT    R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +
Sbjct: 153 GLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFM 210

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
              +   ++        N+ +  ++ L   + ++    G++      F   I      + 
Sbjct: 211 FAQSSWFLA--------NLENIEVIKLISQV-IKDFASGEIKQASTLFDCDITLDDYLLK 261

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KT +L+  +  S AI +  S    E++  +G NLG+ FQ+ DD+LD
Sbjct: 262 SYYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILD 310


>gi|115488130|ref|NP_001066552.1| Os12g0271700 [Oryza sativa Japonica Group]
 gi|113649059|dbj|BAF29571.1| Os12g0271700 [Oryza sativa Japonica Group]
          Length = 372

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 23/229 (10%)

Query: 13  SKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLF 65
           S  ++ + DDLL        +    N  L+SA       GGK++R    FLV+   A L 
Sbjct: 51  SSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELA 110

Query: 66  NVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +  LT    R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +
Sbjct: 111 GLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFM 168

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
              +   ++        N+ +  ++ L   + ++    G++      F   I      + 
Sbjct: 169 FAQSSWFLA--------NLENIEVIKLISQV-IKDFASGEIKQASTLFDCDITLDDYLLK 219

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              KT +L+  +  S AI +  S    E++  +G NLG+ FQ+ DD+LD
Sbjct: 220 SYYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILD 268


>gi|195999464|ref|XP_002109600.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens]
 gi|190587724|gb|EDV27766.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens]
          Length = 302

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 26/194 (13%)

Query: 50  GKKIRSFLVTECASLFNV-------NHLTALR--VGAAIECIHCYSLIHDDLPSMDNGYI 100
           GK+IR  LV   A   N        + LT  +  +G   E IH  SLIHDD+  +D  +I
Sbjct: 17  GKQIRPMLVYLTARACNYHTDPKKESKLTEGQSAIGVISEMIHTASLIHDDV--IDAAHI 74

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT++  + +  AI+ G+ +L+ A   +S  + +    + SQ++  L     +Q  L
Sbjct: 75  RRGKPTINSVWGQKKAILTGDYILSRATVALSKLRNERVVIVLSQVLDDLVQGEFMQ--L 132

Query: 161 GGQMLDIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHA-SQNEKERLRCFGE 215
           G +         D  + F   I+K   KT +LM  +C++ AI+A   +Q   +    FG 
Sbjct: 133 GSKE--------DRGERFNHYIKKTFRKTASLMACSCKAVAILADPLNQFLHDVAFNFGM 184

Query: 216 NLGIIFQLADDLLD 229
           + GI FQL DDLLD
Sbjct: 185 HFGISFQLIDDLLD 198


>gi|254526364|ref|ZP_05138416.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT
           9202]
 gi|221537788|gb|EEE40241.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT
           9202]
          Length = 323

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 19/221 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTAL- 73
           ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +    LT+  
Sbjct: 11  VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTSKH 70

Query: 74  -RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A   ++
Sbjct: 71  KRLAEITEMIHTASLVHDDV--VDEAATRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188
           +      DN+    +LS      +  +  G++    + F D  Q F   I K   KT +L
Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 178

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD
Sbjct: 179 IANSCKAAGVLSEINDENLTSLYEFGKNIGLAFQVVDDILD 219


>gi|254382424|ref|ZP_04997783.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
 gi|194341328|gb|EDX22294.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
          Length = 336

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 17/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV   AS F   +   +   A + E  H  +L HDD+  MD   +RRG  + 
Sbjct: 53  GGKRFRPLLVM-LASRFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVASA 109

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L+ 
Sbjct: 110 NARWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILET 159

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               +  D  + ++ +   KTG+L+  +   GA+M+ A ++  + L  +GE LG  FQLA
Sbjct: 160 AGPRDGRDPVEHYLDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLA 219

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 220 DDVLDIASD 228


>gi|282852728|ref|ZP_06262070.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
 gi|282556470|gb|EFB62090.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
          Length = 324

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L+  +  ++S 
Sbjct: 82  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS- 138

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFG 191

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC  GA  +     +  + + FGE LG  FQL DD+LD
Sbjct: 192 LACFIGAYESGTKVTKALKAKKFGEYLGQAFQLRDDILD 230


>gi|329666771|gb|AEB92719.1| putative polyprenyl synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 350

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 13/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S 
Sbjct: 94  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 151 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFG 203

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC  GA  +        + + FGE LG  FQL DD+LD
Sbjct: 204 LACFIGAYESGLKVTRALKAKKFGEYLGQAFQLRDDILD 242


>gi|326383002|ref|ZP_08204691.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198138|gb|EGD55323.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 339

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 41/242 (16%)

Query: 2   NGGLPSKLQENSKRIDTIL-------DDLLLQTASHMQTQHNDRL--LSAIRYALLGGKK 52
            G    ++QE+ +R++ +L       DD+L++ A+H+      R   + AI  +  G K 
Sbjct: 12  TGEFAGQVQESLQRVEDLLISELSSGDDILVEAATHLAKAGGKRFRPMFAILSSHFGAKP 71

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
               ++T                   IE  H  +L HDD+  MD   +RRG P+ + ++ 
Sbjct: 72  GADEVITSAT---------------VIEMTHLATLYHDDV--MDEAALRRGAPSANARWS 114

Query: 113 EVTAIIAGNGLLTYAFEIISS--PKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
              AI+AG+ L   A  ++S+  P+    + D     +   +   +G+            
Sbjct: 115 NSIAILAGDFLFARASHLVSTLGPEAVRIIADTFAELVTGQMRETVGVSA---------G 165

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+ I+      +   KTG+L+  A   GA  A A +   + L   G+ +G  FQ++DD++
Sbjct: 166 DDPIE--HYLKVVWEKTGSLIATAGRFGAYTAGADETTVDTLARLGDVVGTAFQVSDDII 223

Query: 229 DC 230
           D 
Sbjct: 224 DI 225


>gi|262392448|ref|YP_003284302.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           Ex25]
 gi|262336042|gb|ACY49837.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           Ex25]
          Length = 323

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSNAVNVIAEGEVQ-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|315634742|ref|ZP_07890026.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393]
 gi|315476690|gb|EFU67438.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393]
          Length = 329

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         A+     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLITVLAARALGFEGQKAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++    QL+     ++M   T N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVA----QLESLKILRIMADAT-NVLAEGEVQ-QLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A A   +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIADADDEQEKALQNYGRYLGTAFQLVDDVL 220

Query: 229 D 229
           D
Sbjct: 221 D 221


>gi|329928274|ref|ZP_08282174.1| putative heptaprenyl pyrophosphate synthase component 2
           [Paenibacillus sp. HGF5]
 gi|328937953|gb|EGG34355.1| putative heptaprenyl pyrophosphate synthase component 2
           [Paenibacillus sp. HGF5]
          Length = 334

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +V   +      H  A ++    +E +H  SL+HDD+  +D   +RRG PT+
Sbjct: 45  GGKRLRPLMVVLGSRFGESGHEPAVMKTAVLLEYLHMASLVHDDI--IDQSDMRRGMPTL 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-----G 162
           H   D  TA+  GN ++  A E  +       D     +     + +     L      G
Sbjct: 103 HETTDVQTAVHIGNYMIARAIEWAAGHPGGDPDGNSEDISEDEAYRLAELAALVTELCMG 162

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +   +Q  F   +   Q     + KT  LM    ++GA  AHA     ERL  FGE+LG+
Sbjct: 163 EYDQLQHRFDFGLTMEQYLEKTRCKTALLMAHCLKAGAEAAHADAGTAERLFQFGESLGM 222

Query: 220 IFQLADDLLDCEEDLPKK 237
            FQ+ DDLLD  E  PK+
Sbjct: 223 AFQIRDDLLDFTE--PKE 238


>gi|257899830|ref|ZP_05679483.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15]
 gi|257837742|gb|EEV62816.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15]
          Length = 328

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 19/164 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+ + A+IE +H  +LIHDD+  +D   +RR +P +  Q+  V ++ AG+ L    F+++
Sbjct: 70  AIALAASIEMLHTATLIHDDI--VDEADLRRSQPNIRSQFGNVVSVYAGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           S   T LK    N RS           ++ +L G++  + D +  E  V    +    KT
Sbjct: 128 SDYSTSLKSLQLNSRS-----------MEKVLNGELGQMDDRYNYELSVKEYLENISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD
Sbjct: 177 AELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILD 220


>gi|148652697|ref|YP_001279790.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1]
 gi|148571781|gb|ABQ93840.1| Polyprenyl synthetase [Psychrobacter sp. PRwf-1]
          Length = 309

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +   C+ L  +     A+ + A  E +H  +L+HDD+  +D   +RRG+PT 
Sbjct: 27  GGKRMRPLITLLCSRLCKDEQSKDAMHLAAITEMLHTATLVHDDV--IDESGMRRGRPTA 84

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +D  TA++ G+ L+  AF ++           +S  +L L  + G   +  G++L +
Sbjct: 85  NATWDNPTAVLVGDYLIARAFNLLVG--------FQSLPLLQLFSD-GTCDIAEGEVLQL 135

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC---FGENLGIIF 221
           Q +      ET    I   KT  L   A    AI+    Q++ E ++    FG++ G  F
Sbjct: 136 QHQHNPEATETDYMNIIDGKTSRLFMMATAGVAIL----QDKPEFMQPFSDFGQHFGNAF 191

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 192 QIIDDVLDYSGD 203


>gi|78484685|ref|YP_390610.1| trans-hexaprenyltranstransferase [Thiomicrospira crunogena XCL-2]
 gi|78362971|gb|ABB40936.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2]
          Length = 321

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +      L + A IE IH  +L+HDD+  +D    RRG  T +
Sbjct: 43  GGKRLRPLLVLLSAHACDYKGKDHLTLAAVIEFIHTSTLLHDDV--VDESETRRGNQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++  P       +R   ++S T N+  +G +  Q+L+  
Sbjct: 101 EVWGNAASVLVGDFLYSRSFEMMVEPGI-----MRVMEVMSETTNVIAEGEV-LQLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D      +   +   KT  L   A   G I+    + E      +G +LG  FQL DD L
Sbjct: 155 DADTTSQRYMEVIHRKTAKLFEAATLLGPILGKKPELES-AFSSYGRHLGAAFQLIDDAL 213

Query: 229 DCEED 233
           D   D
Sbjct: 214 DYTAD 218


>gi|76809882|ref|YP_334895.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b]
 gi|167721317|ref|ZP_02404553.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei DM98]
 gi|167740286|ref|ZP_02413060.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 14]
 gi|167817505|ref|ZP_02449185.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 91]
 gi|167825907|ref|ZP_02457378.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 9]
 gi|167847393|ref|ZP_02472901.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei B7210]
 gi|167895981|ref|ZP_02483383.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 7894]
 gi|167904366|ref|ZP_02491571.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei NCTC
           13177]
 gi|167912626|ref|ZP_02499717.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 112]
 gi|167920573|ref|ZP_02507664.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei BCC215]
 gi|254258017|ref|ZP_04949071.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a]
 gi|254299344|ref|ZP_04966794.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e]
 gi|76579335|gb|ABA48810.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b]
 gi|157809083|gb|EDO86253.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e]
 gi|254216706|gb|EET06090.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a]
          Length = 330

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|158288633|ref|XP_565746.3| AGAP000591-PA [Anopheles gambiae str. PEST]
 gi|157018662|gb|EAL41155.3| AGAP000591-PA [Anopheles gambiae str. PEST]
          Length = 346

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 12/184 (6%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A+L  K +   +  E + + N     A+      E IH  SL+HDD+  +D  + RRGKP
Sbjct: 71  AILMAKALNYHMHNENSDVMNAQRQIAM----ISEMIHTASLVHDDV--IDQSFARRGKP 124

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +V++ ++      AG+ +L  A  +++  K     +I SQ++  L     +Q  LG +  
Sbjct: 125 SVNVLWNHKKVTQAGDYILAVASMLLARLKHDEVTHILSQVLTDLVQGEFMQ--LGSK-- 180

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + ++E       F     KT +L+  + ++ A+++ A +   E    +G NLG+ FQ  D
Sbjct: 181 ETENERF--AHYFTKTYRKTASLIANSLKAVAVLSGADEQMAELSFQYGRNLGLAFQFVD 238

Query: 226 DLLD 229
           DLLD
Sbjct: 239 DLLD 242


>gi|90420152|ref|ZP_01228060.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335486|gb|EAS49236.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 337

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      +++ A++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 56  GGKRLRPMLTIASALAHDYRGDAHVKLAASVEFMHTATLLHDDV--VDESDLRRGKKTAR 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ LL  AF      KT ++    + L +LS   ++  +G +  Q+   
Sbjct: 114 TIWGNQASVLVGDFLLGQAF------KTMVEVGSLTALDILSTASSVIAEGEVW-QLSAA 166

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +     E     +   KT AL   A E G ++A A + E+  +R +G +LG+ FQL DD+
Sbjct: 167 KHMTTSEADYLAVIDAKTAALFAAAAEVGPVIAGAGEAERTAMRDYGRSLGLAFQLVDDV 226

Query: 228 LD 229
           LD
Sbjct: 227 LD 228


>gi|257076044|ref|ZP_05570405.1| farnesyl pyrophosphate synthetase/
           geranyltransferase/farnesyltransferase/hexaprenyl
           [Ferroplasma acidarmanus fer1]
          Length = 330

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 28/211 (13%)

Query: 36  NDRLLSAIR-----------YAL-LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECI 82
           N RLL AI+           Y +  GGK+ R  L      +  N  + + L + +  E I
Sbjct: 19  NSRLLQAIKTDQPYLFEMSKYTIDAGGKRFRPLLTILSYEISCNEPYDSILDLASGYELI 78

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SLIHDD+  +D    RRG+ T+  +Y    AI+ G+ L   A+E+ S          
Sbjct: 79  HTASLIHDDI--IDKSKYRRGRETLASRYGIDNAIVVGDYLFAKAYELGS---------- 126

Query: 143 RSQLMLSLTHNIGLQGMLGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           R   ++S     G   +  GQ+   L+I +  +D      I   KT        E   I 
Sbjct: 127 RYGKVVSKVMADGSSHLAEGQIIEALNIGNLSLDIETYNKIIMNKTAYFFSACAEGATIA 186

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A A  N +++L  F  N+G+ FQ+ DD+LD 
Sbjct: 187 AMAPDNVRDKLSKFAYNMGMAFQITDDILDI 217


>gi|91216014|ref|ZP_01252983.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
 gi|91185991|gb|EAS72365.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
          Length = 325

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRS---FLVTECASLFNVNHLTALRVGAA 78
           L +   H+       LL+ I + ++   GK++R    FLV +  S   VN  T  R  + 
Sbjct: 17  LFEKKFHLFMSSRVALLNKITHFIVNRKGKQMRPMFVFLVAKMVSKGEVNDRT-YRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++S      
Sbjct: 76  IELIHTATLVHDDI--VDDSNQRRGFFSINALWKNKIAVLVGDFLLSKGL-LLSI----- 127

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACES 195
            DN    L+  ++  + ++ M  G++L I+      I E   + I + KT  L+   C  
Sbjct: 128 -DNDDFDLLKIIS--VAVREMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCSL 184

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           GA        + E +R FGE +G+ FQ+ DDL D
Sbjct: 185 GAAAVRPGSKDVEDMRKFGELIGMAFQIKDDLFD 218


>gi|48478271|ref|YP_023977.1| farnesyl pyrophosphate synthetase/
           geranyltransferase/farnesyltransferase/hexaprenyl
           diphosphate synthase [Picrophilus torridus DSM 9790]
 gi|48430919|gb|AAT43784.1| farnesyl pyrophosphate synthetase/
           geranyltransferase/farnesyltransferase/hexaprenyl
           diphosphate synthase [Picrophilus torridus DSM 9790]
          Length = 328

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 39/224 (17%)

Query: 36  NDRLLSAI-----------RYAL-LGGKKIRSFLVT---ECASLFNVNHLTALRVGAAIE 80
           N RLL +I           RY +  GGK+ R  L     E AS    ++   L + A  E
Sbjct: 19  NQRLLDSIQTDEKYLYDMARYTIEAGGKRFRPLLTILSFEIAS--GESYEKILDLAAGYE 76

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SLIHDD+  +D+  +RRG+ T+  +     AI+ G+ L   A+E+ S    ++  
Sbjct: 77  LIHTASLIHDDI--IDHSDMRRGRYTLSYKEGINNAIVVGDYLFAKAYELGSRYGKEV-- 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGALMCFACESG 196
              S++M   + N+       GQ+L+ ++       +ET + +I+  KT      AC  G
Sbjct: 133 ---SKIMADASSNLA-----EGQILEAENIGNLNMNEETYLKIIEN-KTARFFA-ACALG 182

Query: 197 AIMAHASQNE-KERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           A  A  +  E   RL  F  N+G+ FQ+ DD+LD    E+D+ K
Sbjct: 183 ATKAAGADFEISNRLSNFAYNMGMAFQITDDILDIIGNEKDMGK 226


>gi|326390072|ref|ZP_08211634.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993937|gb|EGD52367.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 322

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 20/228 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASL 64
           K   N+  I   LD+++      ++  +    + LL  IR +   GK +R   V      
Sbjct: 3   KFWNNNLEIKNELDEVIKIMEKRIKNSNRSIRNILLDMIRNS---GKMLRPAFVILSGKF 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +    L + AA+E +H  +L+HDD+  +DN  IRR KPT+  +Y +  A+  G+ L 
Sbjct: 60  GEYDRKRILPLAAAVEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKNYAVFIGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM 183
           +  F ++S       DNI  + +  ++  +    +  G++   +  + ID T    ++++
Sbjct: 118 SECFLLLS-------DNITIENLKKVSKVVS--RICKGEIGQFESRYNIDITINDYLKRI 168

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             KT AL   +   GA  ++  +   + L   G N+G+ FQ+ DD+LD
Sbjct: 169 AAKTAALFALSFYVGAYESNCGEKLAKILGSIGYNIGMAFQIIDDVLD 216


>gi|289549205|ref|YP_003474193.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
 gi|289182822|gb|ADC90066.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
          Length = 300

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+ E A +   +    + +   IE IH  SL+HDD+  +D   +RRG+P+ +
Sbjct: 33  GGKRVRPILMLETARMLGGDTERLIPLAVGIEYIHMASLLHDDV--VDGADVRRGRPSAN 90

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     ++ G+ +   A  + S     L  N++S  ++S      +  M  GQ+L++ 
Sbjct: 91  RVFGNPIVVLTGDYMYARALWLYS-----LYGNMKSIEIVSRA----VMQMAEGQVLELL 141

Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              + IDE     I   KTGAL   +   GA+M+     E+      G  +G  FQ+ DD
Sbjct: 142 HIGKIIDEETYLRIVDGKTGALFGASMGVGALMSGYPGFEE--FYRMGVKVGRAFQMVDD 199

Query: 227 LLD 229
            LD
Sbjct: 200 ALD 202


>gi|281204751|gb|EFA78946.1| trans-prenyltransferase [Polysphondylium pallidum PN500]
          Length = 902

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 32/232 (13%)

Query: 19  ILDDLLLQTASHM----QTQHNDRLLSAIRYAL--LGGKKIRS---FLVTECASLFNVNH 69
           I  DLLL T S +    + Q ND LL+ I   L  L GKK R    FL+++         
Sbjct: 39  IEKDLLLLTNSILNELSKNQENDSLLNKISCLLFNLKGKKTRPTVIFLLSKILENEKTKS 98

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            + L++    E  H  SLIHDD+  +D    RR + TV+  Y    AI  G+ +L+ +  
Sbjct: 99  NSFLKLAMVAEMFHTASLIHDDV--IDGSDTRRDEKTVNTLYSNRMAITGGDFILSKSMV 156

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I+ S +     N+R    +S   N+ L  ++ G++L +Q   +   +      +KT ++ 
Sbjct: 157 ILGSIR-----NVRVAKSMS---NV-LGDLVDGELLQLQGNGLSFEKYLQKSYLKTSSMF 207

Query: 190 CFACESGAIM----------AHASQNEKERLRCF--GENLGIIFQLADDLLD 229
              C+S A++          +    +EK    CF  G  +GI FQ+ DDLLD
Sbjct: 208 SNCCKSVALLGIHDDDDDIGSSIKIDEKTVELCFQFGTYIGIAFQIIDDLLD 259


>gi|227888787|ref|ZP_04006592.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii
           ATCC 33200]
 gi|227850624|gb|EEJ60710.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii
           ATCC 33200]
          Length = 350

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 13/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S 
Sbjct: 94  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 151 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFG 203

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC  GA  +        + + FGE LG  FQL DD+LD
Sbjct: 204 LACFIGAYESGLKVTRALKAKKFGEYLGQAFQLRDDILD 242


>gi|134098296|ref|YP_001103957.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133910919|emb|CAM01032.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 358

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 37/214 (17%)

Query: 43  IRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +R+ L GGK+IR             +         LR  +++E +   +L+HDDL  +D+
Sbjct: 39  VRFVLGGGKRIRPTFAWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDL--IDD 96

Query: 98  GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQL 138
              RRG PTVH                 Q+    AI+ G+  L +A +++ +   P   +
Sbjct: 97  SDTRRGNPTVHQAFAALHRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPPEAM 156

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQ--VFMIQKMKTGALMC-FACE 194
              +R    +          +L GQ LD+      DET      I ++K+ +       E
Sbjct: 157 ARGLRPWRAMRTE-------VLAGQYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLE 209

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +A A +   E LR FG ++G+ FQL DDLL
Sbjct: 210 LGAELAGADETALEALRRFGSDIGVAFQLRDDLL 243


>gi|53720615|ref|YP_109601.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243]
 gi|126451455|ref|YP_001067764.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1106a]
 gi|237813898|ref|YP_002898349.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346]
 gi|242316724|ref|ZP_04815740.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b]
 gi|254180568|ref|ZP_04887166.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
 gi|254190992|ref|ZP_04897498.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254199098|ref|ZP_04905513.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13]
 gi|52211029|emb|CAH37017.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243]
 gi|126225097|gb|ABN88637.1| polyprenyl synthetase [Burkholderia pseudomallei 1106a]
 gi|157938666|gb|EDO94336.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur
           52237]
 gi|169656928|gb|EDS88325.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13]
 gi|184211107|gb|EDU08150.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
 gi|237505493|gb|ACQ97811.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346]
 gi|242139963|gb|EES26365.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b]
          Length = 332

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 111 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 165 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|209522097|ref|ZP_03270748.1| Polyprenyl synthetase [Burkholderia sp. H160]
 gi|209497469|gb|EDZ97673.1| Polyprenyl synthetase [Burkholderia sp. H160]
          Length = 330

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++   
Sbjct: 77  LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGV 134

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  +R   +L+   NI  +G +  Q+L++ D  +DE +   + + KT  L   A +
Sbjct: 135 G-----KMRVMEILAEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GA++A A    +     +G  +G  FQ+ DD LD
Sbjct: 189 LGAVLAGADTKTEAAAAEYGRRIGTAFQIMDDWLD 223


>gi|48475134|gb|AAT44203.1| putative polyprenyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|57863832|gb|AAS16899.2| putative polyprenyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|215694846|dbj|BAG90037.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632699|gb|EEE64831.1| hypothetical protein OsJ_19688 [Oryza sativa Japonica Group]
          Length = 403

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+   IE IH  SLIHDD+  +D+  +RR
Sbjct: 121 GGKRLRPALVFLVSRATAELAGLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRR 178

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T+H  Y    A++AG+ +   +   ++        N+ +  ++ L   + ++    G
Sbjct: 179 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 229

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F   +      +    KT +L+  +  S AI +  S    E++  +G NLG+
Sbjct: 230 EIKQASTLFDCDVTLDDYLLKSYYKTASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGL 289

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 290 SFQVVDDILD 299


>gi|307264970|ref|ZP_07546531.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919955|gb|EFN50168.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 322

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 20/228 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASL 64
           K   N+  I   LD+++      ++  +    + LL  IR +   GK +R   V      
Sbjct: 3   KFWNNNLEIKNELDEVIKIMEKRVKNSNRSIRNILLDMIRNS---GKMLRPAFVILSGKF 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +    L + AA+E +H  +L+HDD+  +DN  IRR KPT+  +Y +  A+  G+ L 
Sbjct: 60  GEYDRRRILPLAAAVEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKNYAVFIGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM 183
           +  F ++S       DNI  + +  ++  +    +  G++   +  + ID T    ++++
Sbjct: 118 SECFLLLS-------DNITIENLKKVSKVVS--RICKGEIGQFESRYNIDITINDYLKRI 168

Query: 184 --KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             KT AL   +   GA  ++  +   + L   G N+G+ FQ+ DD+LD
Sbjct: 169 AAKTAALFALSFYVGAYESNCGEKLAKILGSIGYNIGMAFQIIDDVLD 216


>gi|86153438|ref|ZP_01071642.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843164|gb|EAQ60375.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 297

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ AAI
Sbjct: 4   IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYKLSKMDARFA 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|269964673|ref|ZP_06178911.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B]
 gi|269830572|gb|EEZ84793.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B]
          Length = 323

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSNAVNVIAEGEVQ-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|268565995|ref|XP_002639605.1| C. briggsae CBR-COQ-1 protein [Caenorhabditis briggsae]
 gi|187029454|emb|CAP31310.1| CBR-COQ-1 protein [Caenorhabditis briggsae AF16]
          Length = 392

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 10/159 (6%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++G   E IH  SL+HDD+  +D    RRG  +V+  +    +++ G+ +L  A +I+ S
Sbjct: 136 KIGMIAEMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCS 193

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCF 191
                K N+ + +M S+  ++ L G      +   +    +  V  I+K   KT +L   
Sbjct: 194 IG---KPNVIA-VMASIIEDLVL-GEFMQMSVTPSEATPSQRMVAYIEKTHRKTASLFAS 248

Query: 192 ACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLD 229
           +C S AI+A +S  N  +    +G NLGI FQLADDLLD
Sbjct: 249 SCRSTAILADSSNSNLHQTAYEYGRNLGIAFQLADDLLD 287


>gi|226196886|ref|ZP_03792465.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan
           9]
 gi|225931146|gb|EEH27154.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan
           9]
          Length = 278

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 88  ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 142 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|126656937|ref|ZP_01728115.1| Polyprenyl synthetase [Cyanothece sp. CCY0110]
 gi|126621775|gb|EAZ92484.1| Polyprenyl synthetase [Cyanothece sp. CCY0110]
          Length = 323

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 13/185 (7%)

Query: 49  GGKKIRS--FLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+IR    L+   A++ +   LT    R+    E IH  SL+HDD+  +D   +RR  
Sbjct: 44  GGKRIRPAIVLLVSRATMLD-RELTPRHRRLAEITEMIHTASLVHDDV--VDEAALRRNV 100

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PTV+  +D   A++AG+ L   +   +++        + S+++         QG+     
Sbjct: 101 PTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIFQGINRFDT 160

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D ++D++        KT +L+  + +S AI++ +S    + L  +G  LG+ FQ+ 
Sbjct: 161 TLTLDAYLDKSY------YKTASLIANSAKSAAILSDSSTEVIDSLYAYGRYLGLAFQIV 214

Query: 225 DDLLD 229
           DD+LD
Sbjct: 215 DDILD 219


>gi|302536189|ref|ZP_07288531.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C]
 gi|302445084|gb|EFL16900.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C]
          Length = 336

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 17/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  LV   AS F   +   +   A + E  H  +L HDD+  MD   +RRG  + 
Sbjct: 53  GGKRFRPLLVM-LASRFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVESA 109

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    A++ G+ L   A  I++    +    +R Q           + ++ GQ+L+ 
Sbjct: 110 NTRWGNSVAVLTGDFLFARASHILADLGPE---AVRIQAE-------AFERLVTGQILET 159

Query: 168 ---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D          +   KTG+L+  +   GA+M+ A ++  + L  +GE LG  FQLA
Sbjct: 160 AGPRDGRDPVAHYLDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLA 219

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 220 DDVLDIASD 228


>gi|260799431|ref|XP_002594699.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae]
 gi|229279935|gb|EEN50710.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae]
          Length = 328

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 27/194 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHLTA---------LRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           GK  R  +V   +   N +H  A          R+    E IH  SL+HDD+  +D    
Sbjct: 44  GKAFRPMVVLLMSRACNFHHGAAENSLALPSQRRISMIAEMIHTASLVHDDV--IDEADT 101

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGK  V   + +  AI+ G+ +LT     +SS       N    ++LS      ++ ++
Sbjct: 102 RRGKACVSYLHGQRKAILTGDYILT-----VSSMALAAIGNKDVVILLSQV----IEDLV 152

Query: 161 GGQMLDI---QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            G+ + +   +DE  DE     ++K   KT +L+  +C + A+++ +S++ +E    +G+
Sbjct: 153 RGEFMQLGTKEDE--DERFAHYLKKTFKKTASLLAHSCRAVAVLSGSSKDVQEVAYQYGK 210

Query: 216 NLGIIFQLADDLLD 229
           NLGI FQL DD+LD
Sbjct: 211 NLGIAFQLVDDMLD 224


>gi|158317822|ref|YP_001510330.1| polyprenyl synthetase [Frankia sp. EAN1pec]
 gi|158113227|gb|ABW15424.1| Polyprenyl synthetase [Frankia sp. EAN1pec]
          Length = 338

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V   A   + +    +    AIE  H  +L HDD+  MD   +RRG  + +
Sbjct: 54  GGKRFRPMVVLLAAQFADPDAAGVVPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASAN 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++    AI+ G+ L   A EI +   P+    L   I +     +   +G+     G  
Sbjct: 112 ARWTNTVAILTGDFLFARASEITADLGPEATRILARTIATLCEGQIRETVGV-----GPG 166

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            D  + ++       +   KT +L+  +   GA++A A     + L  FGE  G+ FQL+
Sbjct: 167 QDPIEHYL------RVITEKTASLIATSARLGAMLAGADPVTTDVLAAFGERFGVAFQLS 220

Query: 225 DDLLDC 230
           DDL+D 
Sbjct: 221 DDLIDV 226


>gi|307325950|ref|ZP_07605149.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306888442|gb|EFN19429.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 359

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 30/247 (12%)

Query: 6   PSKLQENSKR--IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTECA 62
           P +L  ++ R  +D +L+D L   A      H   L   ++  L GGK+IR  L VT   
Sbjct: 8   PGRLDADTVRESVDVVLEDFLTAKARTTPQHHLPYLSGLLKDFLSGGKRIRPLLCVTGWQ 67

Query: 63  SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------IQY 111
           ++       A+ RV A +E  H ++LIHDD+  MD+   RRG+PT+H           + 
Sbjct: 68  AVGGGEDTDAVFRVAACLEMFHAFALIHDDV--MDDSDTRRGRPTIHRTLAALCAADRRP 125

Query: 112 DEVT------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           D++       A++ G+  LT++ E++ S         +   +L L   +  + ML GQ L
Sbjct: 126 DQIERFGVSGAVLLGDLALTWSDELLHSAGLT---PAQFDAVLPLLSEMRTEVML-GQYL 181

Query: 166 DIQ--DEFIDETQVFM-IQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D+Q   E  D+ +  + + + KT           GA +A A+    E    +   LG  F
Sbjct: 182 DLQATGELTDDVEATLTVNRYKTAKYTIERPLHVGAAIAGAAPEAMEAFTAYALPLGEAF 241

Query: 222 QLADDLL 228
           QL DDLL
Sbjct: 242 QLRDDLL 248


>gi|134280083|ref|ZP_01766794.1| polyprenyl synthetase [Burkholderia pseudomallei 305]
 gi|134248090|gb|EBA48173.1| polyprenyl synthetase [Burkholderia pseudomallei 305]
          Length = 309

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 88  ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 142 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|167842012|ref|ZP_02468696.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis MSMB43]
          Length = 330

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|291004284|ref|ZP_06562257.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 370

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 37/214 (17%)

Query: 43  IRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +R+ L GGK+IR             +         LR  +++E +   +L+HDDL  +D+
Sbjct: 51  VRFVLGGGKRIRPTFAWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDL--IDD 108

Query: 98  GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQL 138
              RRG PTVH                 Q+    AI+ G+  L +A +++ +   P   +
Sbjct: 109 SDTRRGNPTVHQAFAALHRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPPEAM 168

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQ--VFMIQKMKTGALMC-FACE 194
              +R    +          +L GQ LD+      DET      I ++K+ +       E
Sbjct: 169 ARGLRPWRAMRTE-------VLAGQYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLE 221

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +A A +   E LR FG ++G+ FQL DDLL
Sbjct: 222 LGAELAGADETALEALRRFGSDIGVAFQLRDDLL 255


>gi|238853177|ref|ZP_04643564.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
 gi|238834231|gb|EEQ26481.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
          Length = 338

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 13/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S 
Sbjct: 82  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 138

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFG 191

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC  GA  +     +  + + FGE LG  FQL DD+LD
Sbjct: 192 LACFIGAYESGIKVTKALKAKKFGEYLGQAFQLRDDILD 230


>gi|163791759|ref|ZP_02186144.1| heptaprenyl diphosphate synthase, component II, putative
           [Carnobacterium sp. AT7]
 gi|159872973|gb|EDP67092.1| heptaprenyl diphosphate synthase, component II, putative
           [Carnobacterium sp. AT7]
          Length = 326

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 25/203 (12%)

Query: 42  AIRYALL-----GGKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPS 94
           +I +AL+     GGK +R    T   S F  +H    A    AAIE +H  +LIHDD+  
Sbjct: 34  SIEHALMDMMHTGGKLVRPAF-TLLFSTFGEDHDPRRARAFAAAIEILHMATLIHDDV-- 90

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D+   RRG+ T+  +Y +  A+ AG+ L T +F++++     +K     Q+ ++     
Sbjct: 91  IDDSPKRRGQSTIQSKYGKDVAVYAGDYLFTVSFKLLTDYSNSMK-----QMQINTN--- 142

Query: 155 GLQGMLGGQMLDIQDEFIDETQV--FMIQ-KMKTGALMCFACESGAIMAHASQNEKERLR 211
           G++ +L G++  +   +  +  V  ++ Q   KT  L   AC SGA+     Q+E+    
Sbjct: 143 GMERILMGEIDQMHLRYNQKITVRNYLTQISGKTAQLFALACYSGAL--EGGQSERFARN 200

Query: 212 CF--GENLGIIFQLADDLLDCEE 232
           C+  G ++G+ FQ+ DD+LD  +
Sbjct: 201 CYYIGSHIGMAFQIMDDILDYSQ 223


>gi|269960912|ref|ZP_06175282.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3]
 gi|269834352|gb|EEZ88441.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3]
          Length = 323

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    T+L  +++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILKLMSDAVNVIAEGEVQ-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A +  +   + +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEEVEVAFQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|13541888|ref|NP_111576.1| octaprenyl diphosphate synthase [Thermoplasma volcanium GSS1]
 gi|14325322|dbj|BAB60226.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
          Length = 326

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 12/184 (6%)

Query: 49  GGKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L +    S  +  +   L + A  E IH  SLIHDD+  +D+  +RRG+PT+
Sbjct: 44  GGKRFRPLLTILAFESSTDDPYFKILDLAAGYELIHTASLIHDDI--IDDSPMRRGRPTL 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +     AI+  + L   A+E+ S     +     S++M   +  +    +L    L  
Sbjct: 102 SYKEGINNAIVVADYLFAKAYELGSRYGPLV-----SKVMADASSRLAEGQILEAVNLGN 156

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGA-IMAHASQNEKERLRCFGENLGIIFQLADD 226
            D  I E   + I + KT      AC  GA I+A A +  +E L  F  NLG+ FQ+ DD
Sbjct: 157 LD--ITEDTYYKIIENKTAHFFE-ACALGATIVAEADRPTREILSNFAFNLGMAFQVTDD 213

Query: 227 LLDC 230
           +LD 
Sbjct: 214 ILDI 217


>gi|307731052|ref|YP_003908276.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
 gi|323527410|ref|YP_004229563.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
 gi|307585587|gb|ADN58985.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
 gi|323384412|gb|ADX56503.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
          Length = 330

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPALLLLVAGALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++          +R   +LS   NI  +G +  Q+L++ 
Sbjct: 109 ALFGNAASVLVGDFLYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A + GA++A A    +     FG  +G  FQ+ DD L
Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGADARTEAAAAEFGRRIGTAFQIMDDWL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|195388636|ref|XP_002052985.1| GJ23628 [Drosophila virilis]
 gi|194151071|gb|EDW66505.1| GJ23628 [Drosophila virilis]
          Length = 445

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +IS  ++   
Sbjct: 200 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDV 257

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 258 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 309

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 310 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 341


>gi|171912385|ref|ZP_02927855.1| Farnesyltranstransferase [Verrucomicrobium spinosum DSM 4136]
          Length = 336

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 16/184 (8%)

Query: 50  GKKIRSFL-VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK+IR  L V    +   V H    ++   +E IH  SL+HDD+  MD   IRR  PT  
Sbjct: 52  GKRIRPALAVLAGGATGGVTH-EHRQLSIILEMIHIASLVHDDI--MDGATIRREMPTAA 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ L  YA E+     TQ  ++   + +   + ++       G++L  Q
Sbjct: 109 AKWGNALSVLLGDSLFAYALEL----ATQFDESSICRKIARASRDVAC-----GEILQTQ 159

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             F   +   + F I +MKT AL   A E GA +   S +    +  +G  LG  +Q+ D
Sbjct: 160 RRFDFTLSMEEYFKIIEMKTAALFASATELGARLNGCSDSVVASMYNYGNRLGTAYQIYD 219

Query: 226 DLLD 229
           D +D
Sbjct: 220 DCID 223


>gi|329116532|ref|ZP_08245249.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020]
 gi|326906937|gb|EGE53851.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020]
          Length = 326

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 25/238 (10%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           +K  E  K ID +++ L+ Q A+    +++D   + +  +  GGK +R       +   +
Sbjct: 6   NKFPEIQKEIDAVVE-LIGQRAN---VRNSDIKAAIVDLSTAGGKYLRPAFFFFFSQFGD 61

Query: 67  ---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N     ++ A++E +H  +LIHDD+  +D+  +RRG+ T+  Q+ +  A+  G+ L
Sbjct: 62  QEQKNRDQLRQIAASLEILHMATLIHDDV--IDDSPLRRGQKTIQTQFGKDVAVYTGDFL 119

Query: 124 LTYAFEII-----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            T  FE+I      SP   +      Q+++         G L    L    E   E+ + 
Sbjct: 120 FTIFFELILESMQDSPYMTINAKAMKQILI---------GELEQMELYFNQEQDVESYLT 170

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I   KT  L   A + GA  A ASQ+        G ++G+ FQ+ DD+LD   D PK
Sbjct: 171 AISG-KTAELFQLASQEGAYFAGASQDVVSLAGRIGHHIGMTFQILDDILDYTAD-PK 226


>gi|296130537|ref|YP_003637787.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109]
 gi|296022352|gb|ADG75588.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109]
          Length = 335

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L + N    +   A +E  H  +L HDD+  MD+  +RRG P+ H
Sbjct: 51  GGKRLRPLLTLLTAELGDGNRREVIDAAAVVELTHLATLYHDDV--MDSAPLRRGAPSAH 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A  I+S    +    +R Q           + +  GQ+ +  
Sbjct: 109 EVWGNSVAILTGDLLFARASSIVSGLGPE---AVRIQAQT-------FERLCLGQLHETV 158

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               DE  V     +   KT +L+  +   GA+ A    +    +  FGE +G+ FQLAD
Sbjct: 159 GPRPDEDPVEHYLQVLADKTASLIATSARFGAMFAGCRPDVVRTVTQFGEIVGVAFQLAD 218

Query: 226 DLLDCEED 233
           D++D   D
Sbjct: 219 DVIDLTSD 226


>gi|111220513|ref|YP_711307.1| heptaprenyl diphosphate synthase component II [Frankia alni ACN14a]
 gi|111148045|emb|CAJ59711.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
           subunit 2) [Frankia alni ACN14a]
          Length = 296

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V   A   + +    +    AIE  H  +L HDD+  MD    RRG  + +
Sbjct: 12  GGKRFRPIVVLLAAQFADPHAPGVVPAAVAIELTHLSTLYHDDV--MDEAPRRRGAASAN 69

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    AI+ G+ L   A +I +        ++       L   I    +  GQ+ +  
Sbjct: 70  ARWTNTVAILTGDYLFARASDITA--------DLGPAATRILARTIAT--LCEGQIRETV 119

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               D+  V     +   KT +L+  +   GA++A A     + L  FGE  G+ FQL+D
Sbjct: 120 GPAPDQDPVEHYLRVVTEKTASLIATSGRLGAMLAGADPVTVDTLATFGELFGVAFQLSD 179

Query: 226 DLLDCEED 233
           D++D   D
Sbjct: 180 DIIDVASD 187


>gi|325289830|ref|YP_004266011.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965231|gb|ADY56010.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM
           8271]
          Length = 322

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 23/222 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECA 62
           L S+++ +  +++  LD LL           +D +LS     LL  GGK++R        
Sbjct: 6   LFSEIKADLTKVEKELDKLLAV---------DDPILSKTCVYLLQAGGKRMRPGFTLLSG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             FN +    L V  AIE IH  +L+HDD+  +D    RRG+PT+   +    ++  G+ 
Sbjct: 57  RFFNYDFKKILPVAMAIELIHMATLVHDDV--VDASLTRRGRPTLAAGWGNTVSVATGDF 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLDIQDEFIDETQVFMI 180
           L   A E+I     ++ D   ++++  ++  +  QG +       D++  F    Q +  
Sbjct: 115 LFAKALEMIG----KIDDPGVAKILADVSVEM-CQGEIQQIWSAFDVKQNF---KQYYYR 166

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            + KT  L+  +C  GA+++  S      L  +G  LGI FQ
Sbjct: 167 IRRKTALLIGLSCRLGAMVSDGSLRHMWLLETYGHCLGIAFQ 208


>gi|78779003|ref|YP_397115.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9312]
 gi|78712502|gb|ABB49679.1| Trans-hexaprenyltranstransferase [Prochlorococcus marinus str. MIT
           9312]
          Length = 323

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 21/222 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV----TECASLFNVNHLT 71
           ++  LDDL+ +  + +   H     +A      GGK++R  +V       +S F + +  
Sbjct: 11  VENDLDDLIFELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISSEFCLTN-K 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A   +
Sbjct: 70  HKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGA 187
           ++      DN+    +LS      +  +  G++    + F D  Q F   I K   KT +
Sbjct: 128 ANL-----DNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTAS 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +C++  +++  S  +   L  FG+N+G+ FQ+ DD+LD
Sbjct: 178 LIANSCKAAGVLSDLSDEKLNSLYDFGKNIGLAFQVVDDILD 219


>gi|118462300|ref|YP_883928.1| polyprenyl synthetase [Mycobacterium avium 104]
 gi|118163587|gb|ABK64484.1| polyprenyl synthetase [Mycobacterium avium 104]
          Length = 395

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 24/202 (11%)

Query: 45  YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           Y L GGK +R  L +  C  L    HL A L   A +E  H   LIHDD+   D  + RR
Sbjct: 55  YPLRGGKALRPALSIATCLGLGG--HLEAILPTAATLELYHNAFLIHDDI--EDESWWRR 110

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGM-- 159
           GKPT+HI +    A+  G+ +L+ + +        L DN+ R  L  +L     +  M  
Sbjct: 111 GKPTLHIDHGVPVAVNVGDAMLSLSLQ-------PLLDNVERVGLGPALRILRAVATMTR 163

Query: 160 --LGGQMLDI-----QDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLR 211
             + GQ L++         +D+     + ++KT         ++GA+ A ++ +    L 
Sbjct: 164 KTVDGQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGSTPDRMAPLE 223

Query: 212 CFGENLGIIFQLADDLLDCEED 233
             G +LG  FQ+ DDLL+   D
Sbjct: 224 SLGRHLGAAFQITDDLLNLRAD 245


>gi|195107776|ref|XP_001998484.1| GI23994 [Drosophila mojavensis]
 gi|193915078|gb|EDW13945.1| GI23994 [Drosophila mojavensis]
          Length = 435

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +IS  ++   
Sbjct: 190 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDV 247

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 248 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 299

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 300 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 331


>gi|148925911|ref|ZP_01809598.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844897|gb|EDK22001.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 297

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ AAI
Sbjct: 4   IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARF- 112

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 113 --------TSIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|12082285|dbj|BAB20883.1| GGPP synthase [Taraxacum japonicum]
          Length = 127

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT H  Y E  A++AG+ LL +AF+ I+S             +  L  +IG 
Sbjct: 1   NDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFQHIASATVGASPARVLAAVGELAKSIGT 60

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI      +    Q+  I   KT AL+  A   GAI+   S  + E+LR F
Sbjct: 61  EGLVAGQVVDIASTGAKDVGLEQLEFIHIHKTAALLEAAVVLGAIVGGGSDTQVEKLRKF 120

Query: 214 GENLGII 220
              +G++
Sbjct: 121 ARCIGLL 127


>gi|299783324|gb|ADJ41322.1| Trans-hexaprenyltranstransferase [Lactobacillus fermentum CECT
           5716]
          Length = 328

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 21/211 (9%)

Query: 28  ASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTA----LRVGAAIECI 82
           A+ ++T+ + +L SA+ + A  GGK +R       ASL            +++  +IE +
Sbjct: 25  AARIKTK-DGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVL 83

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +LIHDD+  +D+   RRG+ ++  ++ +  A+ +G+ L T  F++I++         
Sbjct: 84  HMATLIHDDI--IDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLT 141

Query: 143 -RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKM--KTGALMCFACESGAI 198
             +Q+M    H I     L G++  + D F  D+T +  ++ +  KT AL   A   GA 
Sbjct: 142 TNAQIM----HRI-----LSGELGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAY 192

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              A Q      +  G+N+GI FQ+ DD+LD
Sbjct: 193 FGGADQRTVALAKRIGQNVGIAFQILDDILD 223


>gi|157868092|ref|XP_001682599.1| polyprenyl synthase [Leishmania major strain Friedlin]
 gi|68126054|emb|CAJ07107.1| putative polyprenyl synthase [Leishmania major strain Friedlin]
          Length = 742

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 22/205 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   DN  +RRG   VH
Sbjct: 446 GGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++Y   TAI AG+      F    + + Q     ++  +  L  ++ L G   GQ LDI 
Sbjct: 504 VEYGVATAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVLLAGH-AGQGLDIY 559

Query: 169 D---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                     E  D + +F     I   KTG  +   C    ++  A     E +  FG 
Sbjct: 560 RLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSEAVERFGL 619

Query: 216 NLGIIFQLADDLLDC---EEDLPKK 237
            LG+ FQ+ DD L+    EE+L ++
Sbjct: 620 ALGLAFQIVDDALNIRGFEENLKEE 644


>gi|257866353|ref|ZP_05646006.1| polyprenyl synthetase [Enterococcus casseliflavus EC30]
 gi|257873131|ref|ZP_05652784.1| polyprenyl synthetase [Enterococcus casseliflavus EC10]
 gi|257800311|gb|EEV29339.1| polyprenyl synthetase [Enterococcus casseliflavus EC30]
 gi|257807295|gb|EEV36117.1| polyprenyl synthetase [Enterococcus casseliflavus EC10]
          Length = 326

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY 99
           I +   GGK +R  L    A L + ++       ++ A++E +H  +LIHDD+  +D+  
Sbjct: 38  IDFTYSGGKMLRPALFFLFADLGDPHYKKTDQLTKIAASLEILHMATLIHDDI--IDDSP 95

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RR + TV  +Y +  A+  G+ L T  FE+       L +++     L  T+   ++ +
Sbjct: 96  LRRSQVTVQAKYGKDIAVYTGDLLFTQFFEL-------LIESMNGSPFLK-TNAQAMKRL 147

Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++  +   + I E+    +Q +  KT  L   AC  GA         +ER    G N
Sbjct: 148 LLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHFGGLDTENQERAGEIGRN 207

Query: 217 LGIIFQLADDLLDCEED 233
           +GI FQ+ DD+LD   D
Sbjct: 208 IGIAFQVFDDILDYTSD 224


>gi|157414822|ref|YP_001482078.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385786|gb|ABV52101.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747460|gb|ADN90730.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931736|gb|EFV10691.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 297

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ AAI
Sbjct: 4   IDELIKQFLEELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFT 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|156848549|ref|XP_001647156.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117840|gb|EDO19298.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 471

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 39/193 (20%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL   T +   
Sbjct: 176 RLAEIVEMIHTASLLHDDV--IDHSETRRGRPSGNKAFTNKMAVLAGDFLLGRATVSISR 233

Query: 131 ISSPKT-----------------QLK-----------DNIRSQLMLSL---THNI-GLQG 158
           + +P+                  QLK           D  R +L  S+   T+++   + 
Sbjct: 234 LRNPEVVELMSNSIANLVEGEFMQLKNTAVDNNLNTIDEGRKELPPSIGKFTNDLHDYRV 293

Query: 159 MLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            +   +L  +D  I+    + + K  +KT +L+  AC S AI++ AS    +    +G+N
Sbjct: 294 PINDNLLTSKDAMINTAFEYYLHKTYLKTASLISMACRSSAILSGASPEVVDSCYEYGKN 353

Query: 217 LGIIFQLADDLLD 229
           LGI FQL DD+LD
Sbjct: 354 LGICFQLVDDMLD 366


>gi|29829539|ref|NP_824173.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29606647|dbj|BAC70708.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
          Length = 337

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A        T L    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 52  GGKAVRPALALLSAQAAGAPAETGLPGAVAVELVHNFSLLHDDL--MDGDEERRHRRTVW 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ LL  A E++      L   + +    +       + ++ GQ+ D+ 
Sbjct: 110 TLWGASGAILTGDALLALAQEVL------LDCGLPTGAAAARLLARTTRDLIRGQVQDVA 163

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +   +   +   KTGAL+  +   GA++A A     + L  +G+ +G+ FQL D
Sbjct: 164 FERRAHVPIEECVDMAAGKTGALLSASAAIGAVLAGAPVTTVDALALYGQQVGLAFQLTD 223

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 224 DVLGIWGD 231


>gi|283777976|ref|YP_003368731.1| hypothetical protein Psta_0175 [Pirellula staleyi DSM 6068]
 gi|283436429|gb|ADB14871.1| protein of unknown function DUF116 [Pirellula staleyi DSM 6068]
          Length = 673

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 5/166 (3%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R   +IE  H  SL+HDD+   D+   R G+ TVH ++   TAI  G+ L+   + +
Sbjct: 379 TVKRAALSIETFHKASLVHDDI--EDDDAFRYGEETVHRRFGTPTAINVGDYLIGMGYRL 436

Query: 131 ISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQML--DIQDEFIDETQVFMIQKMKTGA 187
           +S     +  +  + ++  L   +I L    G ++L  D +D+ +       I  +KT  
Sbjct: 437 VSKQSRAMGPDTAADILDILADAHIRLSEGQGAELLWRDARDKRLSPLDALKIYALKTSP 496

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               A  SGA +A       E LR F  NLG+ FQ+ +DL D + D
Sbjct: 497 AFEAALLSGARLAGDVTQYLEPLRQFARNLGVAFQILNDLGDWQGD 542


>gi|257875966|ref|ZP_05655619.1| polyprenyl synthetase [Enterococcus casseliflavus EC20]
 gi|257810132|gb|EEV38952.1| polyprenyl synthetase [Enterococcus casseliflavus EC20]
          Length = 326

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY 99
           I +   GGK +R  L    A L + ++       ++ A++E +H  +LIHDD+  +D+  
Sbjct: 38  IDFTYSGGKMLRPALFFLFADLGDPHYKKTDQLTKIAASLEILHMATLIHDDI--IDDSP 95

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RR + TV  +Y +  A+  G+ L T  FE+       L +++     L  T+   ++ +
Sbjct: 96  LRRSQVTVQAKYGKDIAVYTGDLLFTQFFEL-------LIESMNGSPFLK-TNAQAMKRL 147

Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++  +   + I E+    +Q +  KT  L   AC  GA         +ER    G N
Sbjct: 148 LLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHFGGLDTENQERAGEIGRN 207

Query: 217 LGIIFQLADDLLDCEED 233
           +GI FQ+ DD+LD   D
Sbjct: 208 IGIAFQVFDDILDYTSD 224


>gi|257054017|ref|YP_003131850.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692780|gb|ACV13117.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
          Length = 308

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 27/189 (14%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   + + +V    AL + A +E +H ++L+HDD+  +D    RR +PT+ 
Sbjct: 43  GGKRIRPGLVFLISEMVDVPREDALDIAAGVELLHNFTLVHDDI--IDGDEYRRDEPTLW 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +Y E +AI  G+ +   A  +   P+T+   ++    ++++T+         G+ +DI 
Sbjct: 101 AKYGEGSAINLGDMMFAKAI-LCFPPETR---DLALDTVITVTN---------GEQMDI- 146

Query: 169 DEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +F +   + + + M     KTGAL+    ++   +A    +    L  F  +LG  FQ+
Sbjct: 147 -DFAERRDITVEEYMTMVRRKTGALLELCVDAPLALAETDLD----LSGFT-SLGPAFQI 200

Query: 224 ADDLLDCEE 232
            DDLLD +E
Sbjct: 201 RDDLLDFQE 209


>gi|57238259|ref|YP_178660.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221]
 gi|57167063|gb|AAW35842.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221]
 gi|284925804|gb|ADC28156.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315057959|gb|ADT72288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 297

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ AAI
Sbjct: 4   IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLTIADESEI----AFKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|86149236|ref|ZP_01067468.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|121612193|ref|YP_001000241.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005197|ref|ZP_02270955.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|218562193|ref|YP_002343972.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|85840594|gb|EAQ57851.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|87250330|gb|EAQ73288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|112359899|emb|CAL34687.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315927039|gb|EFV06394.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315929574|gb|EFV08762.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 297

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ AAI
Sbjct: 4   IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|53802938|ref|YP_115384.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str.
           Bath]
 gi|53756699|gb|AAU90990.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str.
           Bath]
          Length = 340

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          + + A IE IH  +L+HDD+  +D   +RRG+ + +
Sbjct: 61  GGKRLRPMLHLLSAKALGYPGDHHITLAAVIEFIHTATLLHDDV--VDESALRRGQDSAN 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++     +++D +R   +LS T     +G +  Q+L+  
Sbjct: 119 ALWGNSASVLVGDYLYSRSFELM----VRVQD-MRVMDILSRTTTAIAEGEVL-QLLNCN 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE +   +   KT  L   A +  A++A +S   +E L+ +G  LGI FQL DD+L
Sbjct: 173 NPATDEGRYLDVISRKTAILFSAAAQLAAVLAGSSHAVEESLKNYGTYLGIAFQLKDDVL 232

Query: 229 DCEED 233
           D + D
Sbjct: 233 DYKAD 237


>gi|10801562|dbj|BAB16694.1| GGPP synthase 2 [Nicotiana tabacum]
          Length = 127

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 3/127 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  Y E  A++AG+ LL +AFE I++    +  +     +  L  +IG 
Sbjct: 1   NDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGT 60

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ+ DI    +  +    +  I   KT AL+  +   GAI+   +  E E+LR F
Sbjct: 61  EGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIF 120

Query: 214 GENLGII 220
              +G++
Sbjct: 121 ARCIGLL 127


>gi|88596918|ref|ZP_01100154.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|88190607|gb|EAQ94580.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 84-25]
          Length = 297

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ AAI
Sbjct: 4   IDELIKQFLEELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|325567558|ref|ZP_08144225.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
           12755]
 gi|325158991|gb|EGC71137.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
           12755]
          Length = 334

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 16/197 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGY 99
           I +   GGK +R  L    A L + ++       ++ A++E +H  +LIHDD+  +D+  
Sbjct: 46  IDFTYSGGKMLRPALFFLFADLGDPHYKKTDQLTKIAASLEILHMATLIHDDI--IDDSP 103

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RR + TV  +Y +  A+  G+ L T  FE+       L +++     L  T+   ++ +
Sbjct: 104 LRRSQVTVQAKYGKDIAVYTGDLLFTQFFEL-------LIESMNGSPFLK-TNAQAMKRL 155

Query: 160 LGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++  +   + I E+    +Q +  KT  L   AC  GA         +ER    G N
Sbjct: 156 LLGELDQMHTRYNIHESIDDYLQSINGKTAELFWLACLEGAHFGGLDTENQERAGEIGRN 215

Query: 217 LGIIFQLADDLLDCEED 233
           +GI FQ+ DD+LD   D
Sbjct: 216 IGIAFQVFDDILDYTSD 232


>gi|255513479|gb|EET89745.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 364

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 12/189 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          + +  +      E +H  +L+HDD+   D    RRG  +V+
Sbjct: 71  GGKRIRPIITLLVIEALGKDPMDYIEFSMIPEILHTATLMHDDIE--DGSETRRGAQSVY 128

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +Y    A+  G+ L  +  +++   K +L D ++ +++ +   ++   G+  GQ  DI 
Sbjct: 129 KKYGMDIALNLGDFLFFFPIKVLLDSK-KLDDAVKYRILKAHEKHMIRIGL--GQATDIA 185

Query: 169 DEF-------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                     I E     +   KTG L+ FA E GAI+  A   + ERL  F   +G+ F
Sbjct: 186 WHRALTDIGKITEENYMRVAFDKTGVLLGFAAELGAIIGGAEDADVERLGKFASMIGVAF 245

Query: 222 QLADDLLDC 230
           Q+ DD+L+ 
Sbjct: 246 QIEDDILNI 254


>gi|157887530|emb|CAM98716.1| hypothetical protein [Plasmodiophora brassicae]
          Length = 376

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 41/240 (17%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRS---FLVTECAS 63
           L   S R+  ++DD++   +  +       LL+++   L   GGK++R     L+    S
Sbjct: 55  LSRVSDRVSFVIDDVVSSFSGRLP------LLASVSKLLFESGGKRLRPSLCLLMAGALS 108

Query: 64  LFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +   A+    +V    E IH  SL+HDD+  +D    RR  PT ++Q+ +  +I+ 
Sbjct: 109 PARRDPSAAIGPVDKVAQISEMIHVASLLHDDV--LDGATTRRNTPTANVQFGDKASILG 166

Query: 120 GNGLLTYAF---------EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           G+ LL+ +          E +S   T + D +  ++M     N+G               
Sbjct: 167 GDFLLSRSSIILASLGSCEAVSLMATIISDLVSGEIMQMRPMNVG--------------S 212

Query: 171 FIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             D  + ++ +   KT +LM  +C + A++   S + +     FG+ LG+ FQL DDLLD
Sbjct: 213 LSDRLEYYLSKSYRKTASLMANSCRTVAVIDDLSSDLQNAAMDFGKYLGLCFQLTDDLLD 272


>gi|329568427|gb|EGG50234.1| polyprenyl synthetase [Enterococcus faecalis TX1467]
          Length = 326

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 22/212 (10%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + T++ D   + +  A  GGK +R    FL  +            L++ A++E +H  +L
Sbjct: 26  LHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+           S+ M
Sbjct: 86  IHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG------SEFM 137

Query: 148 LSLTHNIGLQGM----LG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
                 I  QGM    LG  GQM    D  +           KT  L   +C  GA   H
Sbjct: 138 -----KINAQGMKRLLLGELGQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGH 192

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +S+  +   +  G ++GI FQ+  ++LD   D
Sbjct: 193 SSKEVQRLAKRIGRHIGIAFQVYANILDYTAD 224


>gi|184155577|ref|YP_001843917.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956]
 gi|227514942|ref|ZP_03944991.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC
           14931]
 gi|183226921|dbj|BAG27437.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956]
 gi|227086706|gb|EEI22018.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC
           14931]
          Length = 328

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 19/189 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK +R       ASL            +++  +IE +H  +LIHDD+  +D+   RRG+
Sbjct: 46  GGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVLHMATLIHDDI--IDDSPERRGR 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQ 163
            ++  ++ +  A+ +G+ L T  F++I++           +Q+M    H I     L G+
Sbjct: 104 ISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLTTNAQIM----HRI-----LSGE 154

Query: 164 MLDIQDEFI-DETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +  + D F  D+T +  ++ +  KT AL   A   GA    A Q      +  G+N+GI 
Sbjct: 155 LGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQRTVALAKRIGQNVGIA 214

Query: 221 FQLADDLLD 229
           FQ+ DD+LD
Sbjct: 215 FQILDDILD 223


>gi|86151722|ref|ZP_01069936.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85841351|gb|EAQ58599.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 260.94]
          Length = 297

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ AAI
Sbjct: 4   IDELIKQFLEELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKLDARFA 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|324505880|gb|ADY42520.1| Decaprenyl-diphosphate synthase subunit 1 [Ascaris suum]
          Length = 432

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 30/168 (17%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI--- 130
           ++    E IH  SL+HDD+  +D   +RRG PTV+  +    A++ G+ +L  A ++   
Sbjct: 178 KIAVISEMIHTASLVHDDV--IDESDVRRGSPTVNAIWGNKMAVLVGDFILARATQVLCS 235

Query: 131 ------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQ 181
                 IS   T ++D +R + M           M  G   D     D+++ +T      
Sbjct: 236 IARPNVISVMATIIEDLVRGEFM----------QMTTGSETDATLRFDKYMAKTY----- 280

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             KT +L   +C+S A++A   +  +E    +G +LG+ FQL DDLLD
Sbjct: 281 -SKTASLFANSCKSAAMLADIPEANEEIAFEYGRSLGLAFQLVDDLLD 327


>gi|167586043|ref|ZP_02378431.1| Trans-hexaprenyltranstransferase [Burkholderia ubonensis Bu]
          Length = 331

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 10/182 (5%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R + L+    +L   +H   + + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 52  GGKRLRPALLLFVAGALGETSHQRHV-LAAVVEFIHTATLLHDDV--VDESELRRGRQTA 108

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++
Sbjct: 109 NALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNM 162

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +DE +   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD 
Sbjct: 163 HDADVDEARYMQVIRYKTAKLFEASARLGAVLAGADATTEAAAAEYGRRIGTAFQIMDDW 222

Query: 228 LD 229
           LD
Sbjct: 223 LD 224


>gi|326781297|ref|ZP_08240562.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326661630|gb|EGE46476.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 425

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 43/253 (16%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSA------------IRYALLGGKKIRSFLV 58
           E+++ +D  + D +L+TA  +  +  D  +++              + L GGK++R  L+
Sbjct: 33  EDARGVDADVVDAVLRTARAVLAERMDEAMASDALFCDELARRVADFTLDGGKRVRPRLL 92

Query: 59  TECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------- 109
                       TA LR+G A+E I   +LIHDD+  MD   +RRGKP VHI        
Sbjct: 93  WWGMRSCGAAETTAALRLGVALELIQSCALIHDDV--MDRSRLRRGKPAVHIGLAERAGY 150

Query: 110 --------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                    +    A++AG+  L +A + ++  +T L   ++ + +  L   +  + M+ 
Sbjct: 151 SPDSGRGSAFGASAAVLAGDLALAWADDTVA--ETALS-AVQRRRIGPLWRAMRTE-MVA 206

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQNEKER----LRCFGE 215
           GQ LD++ +    + V   Q ++T  L    ++ E    +  A     E     LR  G 
Sbjct: 207 GQYLDLRGQVSGGSSVE--QALRTACLKSASYSVERPLALGAALAGADEATTDALRSAGR 264

Query: 216 NLGIIFQLADDLL 228
             GI FQL DDLL
Sbjct: 265 CAGIAFQLRDDLL 277


>gi|283955963|ref|ZP_06373453.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792623|gb|EFC31402.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 297

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ AAI
Sbjct: 4   IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|217420539|ref|ZP_03452044.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576]
 gi|217395951|gb|EEC35968.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576]
          Length = 242

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 111 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 165 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|56751750|ref|YP_172451.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301]
 gi|56686709|dbj|BAD79931.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301]
          Length = 323

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 19/188 (10%)

Query: 49  GGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R  +V      T         H    R+    E IH  SL+HDD+  +D   +RR
Sbjct: 44  GGKRLRPAVVLLLSRATMPGQEITPRHR---RLAEITEMIHTASLVHDDV--VDESSLRR 98

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-LG 161
           G PTVH  +    A++AG+ L   A   ++   +     + SQ+++ L     LQG+   
Sbjct: 99  GIPTVHSSFSNRVAVLAGDFLFAQASWHLAHLDSLTVVKLLSQVIMDLAEGEILQGLNRF 158

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              L I+  ++D++        KT +L+  +  + ++++ +S+   + L  +G +LG+ F
Sbjct: 159 DSSLSIE-VYLDKSY------YKTASLLANSARAASVLSGSSETVCDALYDYGRSLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QIVDDILD 219


>gi|260662978|ref|ZP_05863871.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260552599|gb|EEX25599.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 327

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 19/189 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK +R       ASL            +++  +IE +H  +LIHDD+  +D+   RRG+
Sbjct: 45  GGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVLHMATLIHDDI--IDDSPERRGR 102

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQ 163
            ++  ++ +  A+ +G+ L T  F++I++           +Q+M    H I     L G+
Sbjct: 103 ISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLTTNAQIM----HRI-----LSGE 153

Query: 164 MLDIQDEFI-DETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +  + D F  D+T +  ++ +  KT AL   A   GA    A Q      +  G+N+GI 
Sbjct: 154 LGQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQRTVALAKRIGQNVGIA 213

Query: 221 FQLADDLLD 229
           FQ+ DD+LD
Sbjct: 214 FQILDDILD 222


>gi|186477401|ref|YP_001858871.1| polyprenyl synthetase [Burkholderia phymatum STM815]
 gi|184193860|gb|ACC71825.1| Polyprenyl synthetase [Burkholderia phymatum STM815]
          Length = 330

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++   
Sbjct: 77  LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVG- 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  +R   +LS   NI  +G +  Q+L++ D  +DE +   + + KT  L   A +
Sbjct: 134 ----VGKMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GA+++ A    +     FG  +G  FQ+ DD LD
Sbjct: 189 LGAVLSGADATTEAAAAEFGRRIGTAFQIMDDWLD 223


>gi|78187081|ref|YP_375124.1| trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273]
 gi|78166983|gb|ABB24081.1| Trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273]
          Length = 324

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 25/202 (12%)

Query: 44  RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L   GK+IR  +V   A++         R    +E +H  +LIHDD+  +D   +RR
Sbjct: 37  RYVLRQQGKQIRPAMVLLSAAVSGGVTDATYRAAIMVELLHSATLIHDDV--VDGAEMRR 94

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKT---QLKDNIRSQLMLSLTHNIGLQ 157
           G P+++  +    +++ G+ LL+    + + S       Q+ D +R              
Sbjct: 95  GLPSINAIWKNKISVLIGDYLLSRGLLYSLDSGDYGFLHQVSDAVRR------------- 141

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            M  G++L IQ      I E     +   KT +L+  +C  GA+ A + +     ++ +G
Sbjct: 142 -MSEGEILQIQKTRSLDITEEDYLSVISDKTASLIASSCAMGALSATSDEKSILAMKRYG 200

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
           E+LG+ FQ+ DDLLD   D  K
Sbjct: 201 EHLGLAFQIRDDLLDYTGDSKK 222


>gi|226497916|ref|NP_001149100.1| prenyl transferase [Zea mays]
 gi|195624736|gb|ACG34198.1| prenyl transferase [Zea mays]
          Length = 407

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  +  LT    R+   IE IH  SLIHDD+  +D+  +RR
Sbjct: 124 GGKRLRPALVFLVSRATAELAALPELTTEHRRLAEIIEMIHTASLIHDDV--IDDSGMRR 181

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T+H  Y    A++AG+ +   +   ++        N+ +  ++ L   + ++    G
Sbjct: 182 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 232

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F   +      +    KT +L+  +  S AI +       E++  +G NLG+
Sbjct: 233 EIKQASTLFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSGVGSGVCEQMYEYGRNLGL 292

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 293 AFQVVDDILD 302


>gi|329960631|ref|ZP_08298974.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
 gi|328532504|gb|EGF59298.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
          Length = 324

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 16/187 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+       L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPMLVLLAAKLYGEVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A+++G+ LL  A  ++    T      R+  ++ +   +G Q +  G++L + +
Sbjct: 103 IFNNKVAVLSGDYLL--ATSLVQVGLT------RNHAIIDIVSCLG-QDLAEGELLQLSN 153

Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               +F ++    +I+K KT  L     ++GA+   A   + E  R FGE +G+ FQ+ D
Sbjct: 154 VSNLQFSEDVYFDVIRK-KTAVLFAACTKAGALSVGADDEKVEFARLFGEYIGLCFQIKD 212

Query: 226 DLLDCEE 232
           D+ D  E
Sbjct: 213 DIFDYFE 219


>gi|116511014|ref|YP_808230.1| prenyl transferase [Lactococcus lactis subsp. cremoris SK11]
 gi|125623073|ref|YP_001031556.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363]
 gi|116106668|gb|ABJ71808.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|124491881|emb|CAL96802.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300069820|gb|ADJ59220.1| prenyl transferase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 326

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 22/195 (11%)

Query: 44  RYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++A  GGK +R  L    A +    + +    +++ A++E +H  +LIHDD+  +D+  +
Sbjct: 39  KFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPL 96

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRG P+V  Q+ +  A+ AG+ + T  FE++    +  + +  N +S           ++
Sbjct: 97  RRGMPSVESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQS-----------MK 145

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +L G++  +Q  F          K    KT  L+  +C  G   A   +  +   R  G
Sbjct: 146 RILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIG 205

Query: 215 ENLGIIFQLADDLLD 229
             +G+ FQ+ DD+L+
Sbjct: 206 RAIGLAFQVYDDILN 220


>gi|172037378|ref|YP_001803879.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142]
 gi|171698832|gb|ACB51813.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142]
          Length = 327

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     LV+    L +       R+    E IH  SL+HDD+  +D   +RR  P
Sbjct: 48  GGKRIRPAIVLLVSRATMLDSDITPRHRRLAEITEMIHTASLVHDDV--VDEAALRRNVP 105

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV+  +D   A++AG+ L   +   +++        + S+++         QG+      
Sbjct: 106 TVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEIFQGINRFDTS 165

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D ++D++        KT +L+  + +S AI++ +S    + L  +G  LG+ FQ+ D
Sbjct: 166 LTLDAYLDKSY------YKTASLIANSAKSAAILSDSSTEVIDSLYAYGRYLGLAFQIVD 219

Query: 226 DLLD 229
           D+LD
Sbjct: 220 DILD 223


>gi|157413035|ref|YP_001483901.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9215]
 gi|157387610|gb|ABV50315.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9215]
          Length = 323

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 19/221 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTAL- 73
           ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +    LT+  
Sbjct: 11  VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTSKH 70

Query: 74  -RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A   ++
Sbjct: 71  KRLAEITEMIHTASLVHDDV--VDEAATRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188
           +      DN+    +LS      +  +  G++    + F D  Q F   I K   KT +L
Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 178

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD
Sbjct: 179 IANSCKAAGVLSGINDENLTSLYEFGKNIGLAFQVVDDILD 219


>gi|16082302|ref|NP_394768.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma
           acidophilum DSM 1728]
 gi|10640656|emb|CAC12434.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma
           acidophilum]
          Length = 354

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 108/246 (43%), Gaps = 33/246 (13%)

Query: 6   PSKLQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63
           P +   N K RID  +     +  +  +   + R++  IR Y   GGK++R   +     
Sbjct: 8   PHETINNYKLRIDERISRFFDRKEAETKDDLSRRVIRMIREYTEGGGKRLRPIFLVLGYR 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------- 109
           LF   +        +IE    Y LIHDD+  +D+  +RRGKP++HI              
Sbjct: 68  LFADENNAIFDASISIELAQSYLLIHDDV--IDDSDLRRGKPSMHIRLWRSFFPESEKGK 125

Query: 110 QYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLS---LTHNIGLQGMLGGQML 165
           +  E  AI+AG+   TYA E +I+S      D   S L+L+   LT  I + G   GQ L
Sbjct: 126 KMGEGLAIVAGDLAETYAHESLINS------DFDPSLLLLADMELTKTIEMTGY--GQFL 177

Query: 166 DIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+    ++   E  +  +   KT         +   +     ++   LR FG  LGI FQ
Sbjct: 178 DVVSGTLNDFRENDLIRLHLWKTARYTLEGPLAMGALLSGRHDQIMDLRLFGRTLGIAFQ 237

Query: 223 LADDLL 228
           L DD+L
Sbjct: 238 LKDDIL 243


>gi|292654483|ref|YP_003534380.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2]
 gi|291370065|gb|ADE02292.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2]
          Length = 280

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 16/220 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +R+ T+++D L +  S ++       L  +  AL GGK++R  +              A+
Sbjct: 6   RRV-TMVNDRLEEVVSAVEPSELADQLDHV--ALAGGKRVRPAVTILACEAVGGTPEDAV 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
                +E +H  SL+ DD+  +D   IRRG P+   +Y    AIIA +GLL  AF ++SS
Sbjct: 63  DFAVGVELVHNASLVVDDI--IDRSDIRRGTPSAWAEYGYGPAIIASDGLLGEAFALLSS 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                +  I ++ M+ L           G+  ++     +E +   +   KTGAL   A 
Sbjct: 121 SDRATR--IVAESMVELGE---------GEATELVAVPSNEAEYMQLAHRKTGALFRAAA 169

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           E GA+ A    +  E    +   +G+ FQ+ DD+LD   D
Sbjct: 170 ELGAVAASGDAHVVEAFGDYAARVGVAFQIRDDVLDATAD 209


>gi|205355397|ref|ZP_03222168.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346631|gb|EDZ33263.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 275

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 20/187 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GKK+RS L+   A    +    A ++ AAIE IH  SL+HDD+  +D   +RRG  +V+
Sbjct: 7   SGKKLRSKLLLAIADESEI----AFKICAAIELIHLASLLHDDI--IDESELRRGARSVN 60

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDI 167
            ++    A++ G+ L + AF  +S    +           S+  +  ++  +G  M +D+
Sbjct: 61  AEFGTKNALMLGDILYSKAFYELSKMDARF---------TSIISDAVVKLAIGELMDVDL 111

Query: 168 QDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++F I++     +   KT  L+  +   GAI+A   + +      +G+NLG+ FQ+ DD
Sbjct: 112 GEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEKD---FAEYGKNLGLAFQMIDD 168

Query: 227 LLDCEED 233
           +LD + D
Sbjct: 169 ILDIKSD 175


>gi|320530437|ref|ZP_08031495.1| polyprenyl synthetase [Selenomonas artemidis F0399]
 gi|320137270|gb|EFW29194.1| polyprenyl synthetase [Selenomonas artemidis F0399]
          Length = 321

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 17/224 (7%)

Query: 16  IDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRS---FLVTECASLFNVNH 69
            D I +DL +L+ A       +  L+S I   L+  GGK++R     L     + F+ + 
Sbjct: 2   FDVIEEDLTVLEAALEAALSSDSALVSDIGAHLVSSGGKRLRPALFLLAARAGADFDRDR 61

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A+ +  A+E IH  SL+HDD+  +D    RRG  T + ++    AI++G+ +   AF+
Sbjct: 62  --AMPIAVALELIHTASLVHDDV--IDEADTRRGSATTNAKWGNQVAILSGDYIFARAFK 117

Query: 130 IISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            ++         +R + L+ +L+    LQ     Q+   +D + +        + KT   
Sbjct: 118 QVARVGYSSHIYMRLADLVCTLSEGEILQDHTVYQVPVSEDAYYERI------RKKTADF 171

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   CE GA +   S  +      +G  +G+ FQ+ DDLLD ++
Sbjct: 172 LEICCELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQ 215


>gi|195039199|ref|XP_001990881.1| GH19601 [Drosophila grimshawi]
 gi|193895077|gb|EDV93943.1| GH19601 [Drosophila grimshawi]
          Length = 449

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +IS  ++   
Sbjct: 204 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDV 261

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 262 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 313

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 314 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 345


>gi|146299544|ref|YP_001194135.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101]
 gi|146153962|gb|ABQ04816.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101]
          Length = 325

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 20/218 (9%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRS---FLVTECASLFNVNHLTALRVGAA 78
           L +   H        LL+ I Y ++   GK++R    FL  +  S   VN  T  R  + 
Sbjct: 17  LFEKKFHESMTSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMVSGGTVNERT-YRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++S      
Sbjct: 76  IELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI----- 127

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACES 195
            DN    L+  ++  + ++ M  G++L I+      I E   + I + KT  L+   C  
Sbjct: 128 -DNGDFDLLRIIS--VAVREMSEGELLQIEKARRLDITEDVYYEIIRKKTATLIAACCAL 184

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GA        + E +R FGE +G+ FQ+ DDL D  E+
Sbjct: 185 GAKAVIEDDVQVENMRMFGELIGMAFQIKDDLFDYSEE 222


>gi|229823651|ref|ZP_04449720.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271]
 gi|229786888|gb|EEP23002.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271]
          Length = 325

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 14/188 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R+ L    A L       + R + AAIE +H  +LIHDD+  +D    RRG   +H
Sbjct: 46  GKYLRAGLCLAMAQLTPEGITQSKRYIAAAIEVLHLATLIHDDV--IDEADTRRGIEALH 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           IQ     AI AG+ L+TYA  +I   + +   N     +        ++G+L G++  + 
Sbjct: 104 IQKSNRLAIYAGDYLMTYAARLIQKSQQEFDRNPLDAWV--------MEGILIGELNQLA 155

Query: 169 DEFIDETQVF-MIQKMKTGALMCFACESGAIMAHASQNEKERLRCF--GENLGIIFQLAD 225
           +++     ++  +++++    + FA  +       SQ+  +  + F  G+ +G+ FQL D
Sbjct: 156 NQYRQGMTMYDYLRQIRGKTALLFAAATFFGYYSLSQSALQNRQAFYLGQAIGMAFQLRD 215

Query: 226 DLLDCEED 233
           DL+D + D
Sbjct: 216 DLIDYQVD 223


>gi|218884766|ref|YP_002429148.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766382|gb|ACL11781.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 353

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 102/232 (43%), Gaps = 35/232 (15%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL--VTECASLFNVNHL-TALRVGAAIE 80
           L + AS +     D +  A  Y L GGK++R+FL  V   +  +    L T   V + IE
Sbjct: 15  LREEASSVSPLTYDIIEIASDYTLRGGKRLRAFLALVGYWSREWGSGDLATITNVMSGIE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVH---------------IQYDEVTAIIAGNGLLT 125
            +  Y LIHDD+  MD   +RRG PTVH               + Y +  AI  G+ L  
Sbjct: 75  LLQSYLLIHDDV--MDRDELRRGGPTVHAWFRDKCLKEMKGDCVHYGDSQAITVGDYLEA 132

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSL--THNIGLQGMLGGQMLDIQDE-----FIDETQVF 178
            A E IS      + N+  + +  L  T++ GL+ +  GQ LD+         + E  V 
Sbjct: 133 TAVEYIS------RANLPGETLRRLLETYSRGLRMVAYGQYLDVLLSNKPLGNVSERDVL 186

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLL 228
           ++  +KT +          ++A    +EK    L  +    GI FQL DD++
Sbjct: 187 LVHTLKTASYTIELPLHLGVIASGKYSEKILRELTSYAIPAGIAFQLRDDII 238


>gi|308051079|ref|YP_003914645.1| trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799]
 gi|307633269|gb|ADN77571.1| Trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799]
          Length = 322

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 12/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      +++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLAVLAARAVDYQGDDHVKLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLD 166
             +    +++ G+ L T +F+++    T+LK   R +++  L+   N+  +G +  Q+++
Sbjct: 101 ALFGNQASVLVGDFLYTRSFQMM----TELK---RPRVLEDLADATNVLAEGEVL-QLMN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             D    E     +   KT  L   A    A++A       + L  +G  LG  FQL DD
Sbjct: 153 CNDPNTTEESYMQVIYCKTARLFEAATHLAAVIADQPTEVCDALSDYGRYLGTAFQLVDD 212

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 213 VLDYTAD 219


>gi|226227338|ref|YP_002761444.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27]
 gi|226090529|dbj|BAH38974.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27]
          Length = 334

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 16/188 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + GK  R  L+   +S+   +   A+   A +E +H  +L+HDD  ++D+  +RRG PTV
Sbjct: 54  MKGKLFRPTLLLLSSSIEGRSPKRAITFAAVVELMHLATLVHDD--AVDHSALRRGMPTV 111

Query: 108 HIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QML 165
           +  +    ++I G+ L   A  E+++     + D    + M S+T N   +  LG  + L
Sbjct: 112 NSLFSHQVSVIMGDFLYLRALRELVT-----IGD---LEAMRSIT-NASNEMTLGEIRQL 162

Query: 166 DIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              D     E+    + + KT  L   AC+ GA+    +   +E +  FGE LG+ FQ+A
Sbjct: 163 SAYDALAFGESDYETLIRAKTATLFMAACDVGAL--SGAPRYREAVTRFGERLGMAFQVA 220

Query: 225 DDLLDCEE 232
           DDLLD  E
Sbjct: 221 DDLLDYTE 228


>gi|126695982|ref|YP_001090868.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9301]
 gi|126543025|gb|ABO17267.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9301]
          Length = 323

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 19/221 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTA 72
           ++  LDDL+L+  + +   H     +A      GGK++R     L+++  S         
Sbjct: 11  VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTTKH 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A   ++
Sbjct: 71  KRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188
           +      DN+    +LS      +  +  G++    + F D  Q F   I K   KT +L
Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFPKYINKSYCKTASL 178

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD
Sbjct: 179 IANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILD 219


>gi|260887775|ref|ZP_05899038.1| heptaprenyl diphosphate synthase component II [Selenomonas
           sputigena ATCC 35185]
 gi|330838673|ref|YP_004413253.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185]
 gi|260862451|gb|EEX76951.1| heptaprenyl diphosphate synthase component II [Selenomonas
           sputigena ATCC 35185]
 gi|329746437|gb|AEB99793.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185]
          Length = 324

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 14/185 (7%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L    +  F+   +  L V  A+E IH  SL+HDD+  +D+   RRG  
Sbjct: 43  GGKRLRPALFLLAARSSKDFDAKKMMPLAV--ALELIHMASLVHDDV--LDHADTRRGAV 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQM 164
           T +  +    AI++G+     AF +I       + + R +QL++ L+    +Q       
Sbjct: 99  TANAMWGNQQAILSGDYFFARAFLLIVENGFGERVSGRVAQLIMDLSSGEIIQNK----- 153

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            ++     D  + +     KT   +   CE GAI  +     +  LR +G+ +G+ FQ+ 
Sbjct: 154 -ELYRASRDVEEYYERIAKKTANFLAICCELGAIATNLGAEAERGLRAYGKYVGMAFQIT 212

Query: 225 DDLLD 229
           DDLLD
Sbjct: 213 DDLLD 217


>gi|312115019|ref|YP_004012615.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220148|gb|ADP71516.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 338

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +        + + A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 57  GGKRLRPMLTIGAAKMCGYEGTGHIMLAASVEFMHTATLLHDDV--VDESDMRRGKKSAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   +
Sbjct: 115 MLWGNQASVLVGDFLLGQAFRMMVDVGS-----LGALKVLSEASSVIAEGEVW-QLAASK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   +   KT AL   A E GAI+ +    E+  LR +G N+G+ FQL DD L
Sbjct: 169 NLATTEEEYLNVIISKTAALFAAAAEIGAILTNRGPEEQAALRLYGTNIGLAFQLIDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|89890092|ref|ZP_01201603.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
 gi|89518365|gb|EAS21021.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
          Length = 325

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 18/186 (9%)

Query: 50  GKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R   V   A +     VN  T  R  + IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 45  GKQMRPMFVFLVAKMIGDGEVNDRT-YRGASVIELIHTATLVHDDV--VDDSLKRRGFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V+  +    A++ G+ LL+    ++S       DN    L+  ++  + ++ M  G++L 
Sbjct: 102 VNALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLQIIS--VAVREMSEGELLQ 152

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+      I E   + I + KT  L+   C  GA        + E++R FGE +GI FQ+
Sbjct: 153 IEKARRLDITEEVYYDIIRKKTATLIAACCSLGACAVSPGSQDVEKMREFGEMIGIAFQI 212

Query: 224 ADDLLD 229
            DDL D
Sbjct: 213 KDDLFD 218


>gi|42518501|ref|NP_964431.1| hypothetical protein LJ0408 [Lactobacillus johnsonii NCC 533]
 gi|41582786|gb|AAS08397.1| hypothetical protein LJ_0408 [Lactobacillus johnsonii NCC 533]
          Length = 350

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S 
Sbjct: 94  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLS- 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 151 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYKINISEKEYLDQIKGKTGVLFG 203

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC  GA  +     +  + + FG+ LG  FQL DD+LD
Sbjct: 204 LACFIGAYESGLKVTKALKAKKFGDYLGQAFQLRDDILD 242


>gi|308499861|ref|XP_003112116.1| CRE-COQ-1 protein [Caenorhabditis remanei]
 gi|308268597|gb|EFP12550.1| CRE-COQ-1 protein [Caenorhabditis remanei]
          Length = 396

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 16/169 (9%)

Query: 69  HLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           HLT      ++G   E IH  SL+HDD+  +D    RRG  +V+  +    +++ G+ +L
Sbjct: 131 HLTVCQNQYKIGMIAEMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFIL 188

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM 183
             A +I+ S     K N+ S +M S+  ++ L   +  QM     E   + ++   I+K 
Sbjct: 189 ARATQILCSIG---KPNVIS-VMASIIEDLVLGEFM--QMSATPSEATPQQRMNAYIEKT 242

Query: 184 --KTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLD 229
             KT +L   +C S AI+A  +  N  +    +G NLGI FQLADDLLD
Sbjct: 243 HRKTASLFASSCRSTAILADPNNLNLHQTAYEYGRNLGIAFQLADDLLD 291


>gi|296481448|gb|DAA23563.1| prenyl diphosphate synthase, subunit 1 [Bos taurus]
          Length = 418

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 22/199 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  A  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 136 GKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVHDDI--IDDASSRR 193

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 194 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 251

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 252 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 305

Query: 221 FQLADDLLD---CEEDLPK 236
           FQL DD+LD   C E + K
Sbjct: 306 FQLIDDVLDFTSCSEQMGK 324


>gi|297526316|ref|YP_003668340.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255232|gb|ADI31441.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 365

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 49/226 (21%)

Query: 45  YALLGGKKIRSFLV--------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           Y L GGK++R+FLV            S+ +V +L A      IE +  Y L+HDD+  MD
Sbjct: 47  YTLRGGKRLRAFLVLIGYWSRKWGYGSIDSVKYLMA-----GIEFLQSYLLVHDDI--MD 99

Query: 97  NGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYA---FEIISSPKTQ 137
              IRRG PTVH+ +D+                  AII G+ L + A   F  ++ P   
Sbjct: 100 EDEIRRGGPTVHVWFDKKCREGGLIGRCKHYGVSQAIIVGDYLESLAVSMFTRLNLPDYA 159

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC-F 191
           LK+ I+       T+  G++ +  GQ LD+       + + E  V+ I  +KT +     
Sbjct: 160 LKELIK-------TYTRGIRLVAYGQFLDVLIANTPLQKVSEDDVYNIHLLKTASYTVEL 212

Query: 192 ACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               GAI +     E    L  +    GI FQL DD+L    D PK
Sbjct: 213 PLHLGAIASLMYDKELLTELSQYALPAGIAFQLQDDILGLYGD-PK 257


>gi|152990770|ref|YP_001356492.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2]
 gi|151422631|dbj|BAF70135.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2]
          Length = 296

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 24/218 (11%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +LD + ++    ++   + R+L   R ++  GK +RS L+   A +    H +A+     
Sbjct: 1   MLDQVKMRMEQIVEDLQDKRVLEIYR-SIPMGKMLRSKLILNIAPVPEAIHTSAI----- 54

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQ 137
           IE IH  SL+HDD+  +D+   RRG P+V+       AI+ G+ L   AF E+ S PKT 
Sbjct: 55  IELIHMASLLHDDV--IDDADTRRGNPSVNAVLGNKPAIMIGDILYAKAFYELSSLPKTL 112

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACES 195
            +   ++  +LSL           G++ D++    F  + + +M    K  A +  A   
Sbjct: 113 AQTISQAVALLSL-----------GELKDVELSKSFQPDIEAYMDMIYKKTASLIEASAI 161

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A  A+ S  + +    +G+ LG+ FQ+ DD+LD   D
Sbjct: 162 SA--AYLSGKDLKSYGEYGKKLGLAFQIVDDILDIISD 197


>gi|123965918|ref|YP_001010999.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200284|gb|ABM71892.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9515]
          Length = 323

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 27/225 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASL-FNVNHLT 71
           ++  LDDL+L+  + +   H     +A      GGK++R     L+++  S  FN+    
Sbjct: 11  VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISRDFNLTT-K 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A   +
Sbjct: 70  HKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGA 187
           ++      DN++   +LS      +  +  G++    + F D  Q F   I K   KT +
Sbjct: 128 ANL-----DNVKVVKLLSRV----IMDLAEGEIKQNLNRF-DSGQTFSKYINKSYCKTAS 177

Query: 188 LMCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLD 229
           L+  + ++  ++++    E ++L C   FG+N+G+ FQ+ DD+LD
Sbjct: 178 LIANSTKAAGVLSNL---EDDKLNCLYEFGKNIGLAFQVVDDILD 219


>gi|168046685|ref|XP_001775803.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672810|gb|EDQ59342.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 33/251 (13%)

Query: 1   MNGG---LPSKLQENSKR-------IDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL- 47
           MNGG   LPS  +   K        ++ + DDL L       +    N  L++A +    
Sbjct: 1   MNGGATSLPSTDKAEGKSKLTLADLVNPVSDDLRLLNDNLQKIVGADNPMLMAAAKQIFG 60

Query: 48  LGGKKIRS---FLVTECA-SLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
            GGK++R    FLV+     L N+  L     R+    E IH  SLIHDD+  +D    R
Sbjct: 61  AGGKRMRPALVFLVSRATCQLSNIQELRPQHRRLAEITEMIHTASLIHDDV--LDESDTR 118

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGK TVH  +    A++AG+ +   +   ++        N+ +  ++ L   + ++    
Sbjct: 119 RGKETVHQTFGTRVAVLAGDFMFAQSSWYLA--------NLDNLEVIKLISQV-IRDFAS 169

Query: 162 GQMLDIQDEFIDET--QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           G++   Q+ F  E   Q ++ +   KT +L+  + +S AI + ++ +    +  +G +LG
Sbjct: 170 GEIKQAQNLFDTEVTLQNYLDKSYYKTASLIASSTKSAAIFSDSTPSVSNAMFDYGMHLG 229

Query: 219 IIFQLADDLLD 229
           + FQ+ DD+LD
Sbjct: 230 LAFQVVDDILD 240


>gi|147920444|ref|YP_001218859.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I]
 gi|116077941|emb|CAL59658.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I]
          Length = 289

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 14/182 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   +   A L       AL     IECIH  SLI DD+  +D G  RRG+ T H 
Sbjct: 41  GKRLRPLTLLIMAELNGGTVEKALNAALGIECIHTASLIQDDI--LDEGLKRRGELTSHE 98

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++    A ++ + L++ A  + S    +          +     +GL+ +  G++LDI+ 
Sbjct: 99  KFGIFIATVSADYLISRAVMLYSGYDAK---------SIEAFGRMGLE-LAEGEVLDIKT 148

Query: 170 EFIDETQVFMIQKMKTGALMCFAC--ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                 + + ++ ++      FA   E GA +A  S ++ E  R  GE  GI +Q+ DDL
Sbjct: 149 RRSKTDEAYYLECVRRKTATAFASCFEIGARIAGVSDDKAELCRKMGEEFGIAYQIVDDL 208

Query: 228 LD 229
           ++
Sbjct: 209 IE 210


>gi|297570179|ref|YP_003691523.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926094|gb|ADH86904.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 336

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 50/248 (20%)

Query: 5   LPSKLQENSKRIDTIL-DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
           L  +L   +++I+ ++ DDL   T        N RL + + +ALL GGK+IR  L    A
Sbjct: 6   LKQQLAAAAEQINQVIKDDLAAVT--------NPRLAAILEHALLAGGKRIRPLLTLLAA 57

Query: 63  SLF-------NVNHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
            L        N    TA    ++  + E +H  SL+HDD+  +D+  +RRG+ TV+ ++D
Sbjct: 58  QLVQGHKGTENPQAGTATPWQQLAISFEYLHTASLLHDDV--IDHAALRRGRETVNTRWD 115

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-EF 171
             +AI+AG+ L                 + R+ L+      +    ++G     + D EF
Sbjct: 116 NGSAILAGDFL-----------------HARALLLAGRAGGVPCLELIGTATQAMVDSEF 158

Query: 172 ID----------ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           I           E   F +   KT AL+  ACE+G + A  +  ++  L  +G NLG  F
Sbjct: 159 IQQEAAASRDWREETYFAVLDGKTAALIAAACEAGGVAAGGNPAQRRALHTYGGNLGRAF 218

Query: 222 QLADDLLD 229
           Q+ DDLLD
Sbjct: 219 QIIDDLLD 226


>gi|134101792|ref|YP_001107453.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914415|emb|CAM04528.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 249

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 19/159 (11%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H +SL+HDD+  MD    RR +PTV   +    AI+AG+ +L  A  I+S+        
Sbjct: 1   MHNFSLLHDDV--MDGDLTRRHRPTVWSLFGTSNAILAGDAILGLAPRILSATG------ 52

Query: 142 IRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGALMCFACE 194
             S+  L+     G  +  +  GQ  DI   F +   V       + + KTG L+  +C 
Sbjct: 53  --SEHALTAIDWFGKCVVKLCEGQAADIS--FSERVDVGIDACVAMARAKTGELLGTSCA 108

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            G + A A + +   LR FG  +G+ FQL DDLL    D
Sbjct: 109 LGGLFAGADRTQITALREFGSEIGLAFQLVDDLLGIWGD 147


>gi|328950331|ref|YP_004367666.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884]
 gi|328450655|gb|AEB11556.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884]
          Length = 319

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 17/185 (9%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR  LV   + +L  V     + +  A+E +H  +L+HDDL  +D+   RRG+   
Sbjct: 43  GGKRIRPRLVLLASRALGGVPR--EMELALAVELLHSATLLHDDL--VDDAETRRGREAA 98

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +Y    ++++G+ LL+    +       L +  R +L+  L  ++  Q +  G++   
Sbjct: 99  FRKYGNAVSVLSGDYLLSRVLYL-------LAETGRLELV-RLFADVARQ-LAEGEVFQF 149

Query: 168 QDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q   + E      +++   KT ALM    E  A++A A+   +E LR FG   G++FQ+ 
Sbjct: 150 QVAALGEYSKANYERIIAGKTAALMRACTEGVALLADAAPMVREALRRFGYEYGMVFQMR 209

Query: 225 DDLLD 229
           DD LD
Sbjct: 210 DDYLD 214


>gi|319900543|ref|YP_004160271.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
 gi|319415574|gb|ADV42685.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
          Length = 312

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 16/187 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+       L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 33  GKMMRPMLVLLAAKLYGEICPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 90

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A+++G+ LL  A   +           R+  ++ +   +G Q +  G++L + +
Sbjct: 91  IFNNKVAVLSGDYLLATALVQVGLT--------RNHAIIDIVSCLG-QDLAEGELLQLSN 141

Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               +F ++    +I+K KT  L     ++GA+   A     E  R FGE +G+ FQ+ D
Sbjct: 142 VSNLQFSEDIYFDVIRK-KTAVLFAACTKAGALSVGADGERAEFARLFGEYIGLCFQIKD 200

Query: 226 DLLDCEE 232
           D+ D  E
Sbjct: 201 DIFDYFE 207


>gi|269217208|ref|ZP_06161062.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
           700122]
 gi|269129345|gb|EEZ60430.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
           700122]
          Length = 353

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 13/196 (6%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y+  GGK+ R  +          +   A+   AAIE  H  +LIHDD+   D   +RRG+
Sbjct: 60  YSRNGGKRHRPLICLAACVAVGGDVRRAVSSAAAIEHFHTAALIHDDI--ADEATLRRGE 117

Query: 105 PTVHIQYDEVTAIIAGN-GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           P +H+      AI  G+ GL      ++  P   L+D ++ +++  L      +  + GQ
Sbjct: 118 PCLHLTQGLGLAINMGDLGLSLVNGTVVRDP--LLEDGVKVRVIAELIEMT--RRTIEGQ 173

Query: 164 MLDI---QDEFIDET-QVFMIQKMKTGALMCFACE--SGAIMAHASQNEKERLRCFGENL 217
            LD+   +DE  D T + +++      A    A     GAI+   S+ E E LR +G + 
Sbjct: 174 ALDLGWARDERYDITPEDYLVMATHKTAHYSGAVPLAVGAIVGGGSEAEIEGLRAYGLDT 233

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DDLL+ E D
Sbjct: 234 GLAFQIQDDLLNIEGD 249


>gi|242216194|ref|XP_002473906.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726932|gb|EED80866.1| predicted protein [Postia placenta Mad-698-R]
          Length = 258

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 27/166 (16%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SL+HDD+  +D   +RRG P+  + +     I+AG+ LL  A    S+  ++L DN
Sbjct: 2   IHVASLLHDDV--IDKSPLRRGVPSAPLAFGNKLTILAGDFLLGRA----STTLSRLGDN 55

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--------------MKTGA 187
              +L+ S+  N     ++ G++L ++    +E  +  +Q               +KT +
Sbjct: 56  EVVELIASVIAN-----LVEGEILQLKSVHAEELGLGGVQSVGAENFNIYLQKTYLKTAS 110

Query: 188 LMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231
           LM     +  ++    + E  KE    +G NLGI FQL DD+LD E
Sbjct: 111 LMAKGARAAVVLGGCKEGEVWKEIAYAYGRNLGIAFQLVDDILDYE 156


>gi|33865545|ref|NP_897104.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. WH 8102]
 gi|33632714|emb|CAE07526.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. WH 8102]
          Length = 323

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 19/226 (8%)

Query: 9   LQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           LQ     ++T+L DL  L+     +     + L SA      GGK++R  +V   +   +
Sbjct: 8   LQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSA------GGKRLRPGIVLLLSRALS 61

Query: 67  VN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +  LT    R+    E IH  SL+HDD+  +D    RRG  TVH ++D   A++AG+ L
Sbjct: 62  ADGQLTPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFDARVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         + +++++        
Sbjct: 120 FAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFRFDTAQSFETYLEKSYC------ 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +  +  +++  S +E + L  FG  LG+ FQ+ DD+LD
Sbjct: 174 KTASLIANSARAAGVLSDCSPSELDGLYRFGRQLGLAFQVVDDILD 219


>gi|323448786|gb|EGB04680.1| hypothetical protein AURANDRAFT_55083 [Aureococcus anophagefferens]
          Length = 341

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 88/159 (55%), Gaps = 17/159 (10%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +H  SL HDD+  +D    RRG P+V  ++ +  AI+AG+ LL  A   ++    +L
Sbjct: 170 IEIVHTASLFHDDV--IDGADTRRGCPSVSAKFGDKVAILAGDFLLARACVALA----KL 223

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFM---IQKM--KTGALMCFA 192
           ++    +L+     ++ ++ ++ G+++ ++ E    +T   +   +QK   KTG+LM  A
Sbjct: 224 ENLAVVELI-----SVVIEHLVRGEIIQMRPESGTSDTHALLEAYLQKTFYKTGSLMANA 278

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           C + A++   +Q   +    +G ++G+ FQL DD+LD E
Sbjct: 279 CRAAALLEDETQANCDAAFAYGRHVGLAFQLVDDILDFE 317


>gi|321470026|gb|EFX81004.1| hypothetical protein DAPPUDRAFT_318059 [Daphnia pulex]
          Length = 391

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 32/196 (16%)

Query: 50  GKKIRSFLVTECASLFNVNHL---------TALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           GK IR  +    A   N  HL           +++   +E IH  SL+HDD+  +D    
Sbjct: 108 GKAIRPVITLLMAKAINY-HLGENSRNVVEKQMKIAQIVEMIHTASLVHDDV--VDAADS 164

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RR K +V+  + +  +I+AGN ++  + EI ++        I S  +L+L   I    ++
Sbjct: 165 RRNKSSVNKVWGQKKSILAGNYVVGRSIEICTA--------IESHEVLNLITKI-FSELI 215

Query: 161 GGQMLDI-----QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCF 213
            G+++ +     ++E+ D      ++K   KT +L+   C++ +++A AS   +     F
Sbjct: 216 SGELMQLDGTANKEEWFDH----YLEKTFKKTASLIANGCQAVSVVAGASSATQTNAFQF 271

Query: 214 GENLGIIFQLADDLLD 229
           G  LG+ FQL DDLLD
Sbjct: 272 GRQLGMAFQLVDDLLD 287


>gi|81301171|ref|YP_401379.1| trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942]
 gi|81170052|gb|ABB58392.1| Trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942]
          Length = 323

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%)

Query: 49  GGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R  +V      T         H    R+    E IH  SL+HDD+  +D   +RR
Sbjct: 44  GGKRLRPAVVLLLSRATMPGQEITPRHR---RLAEITEMIHTASLVHDDV--VDESSLRR 98

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-LG 161
           G PTVH  +    A++AG+ L   A   ++   +     + SQ+++ L     LQG+   
Sbjct: 99  GIPTVHSSFSNRVAVLAGDFLFAQASWHLAHLDSLTVVKLLSQVIMDLAEGEILQGLNRF 158

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              L I+  ++D++        KT +L+  +  +  +++ +S+   + L  +G +LG+ F
Sbjct: 159 DSSLSIE-VYLDKSY------YKTASLLANSARAAGVLSGSSETVCDALYDYGRSLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QIVDDILD 219


>gi|154152049|ref|NP_001093801.1| decaprenyl-diphosphate synthase subunit 1 [Bos taurus]
 gi|151556844|gb|AAI49262.1| PDSS1 protein [Bos taurus]
          Length = 418

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 22/199 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  A  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 136 GKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVHDDI--IDDASSRR 193

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 194 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 251

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 252 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 305

Query: 221 FQLADDLLD---CEEDLPK 236
           FQL DD+LD   C E + K
Sbjct: 306 FQLIDDVLDFTSCSEQMGK 324


>gi|332521667|ref|ZP_08398120.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332042756|gb|EGI78956.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 300

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 18/186 (9%)

Query: 50  GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R    FLV +  S   V   T  R  + IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 20  GKQMRPMFVFLVAKMVSNGEVKERT-YRGASVIELIHTATLVHDDV--VDDSNKRRGFFS 76

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++  +    A++ G+ LL+    ++S       DN    L+  ++  + ++ M  G++L 
Sbjct: 77  INALWKNKIAVLIGDYLLSKGL-LLSI------DNEDFDLLKIIS--VAVREMSEGELLQ 127

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+      I ET  + I + KT  L+   C  GA     +  E E +R FGE +G+ FQ+
Sbjct: 128 IEKARKLDITETIYYEIIRQKTATLIAACCSLGAASVKPNTLEVETMRKFGELIGMAFQI 187

Query: 224 ADDLLD 229
            DDL D
Sbjct: 188 KDDLFD 193


>gi|91070262|gb|ABE11181.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone
           HF10-11H7]
          Length = 323

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 19/221 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTA 72
           ++  LDDL+L+  + +   H     +A      GGK++R     L+++  S         
Sbjct: 11  VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTTKH 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A   ++
Sbjct: 71  KRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188
           +      DN+    +LS      +  +  G++    + F D  Q F   I K   KT +L
Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 178

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD
Sbjct: 179 IANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILD 219


>gi|260799425|ref|XP_002594697.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae]
 gi|229279933|gb|EEN50708.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae]
          Length = 328

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 18/161 (11%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D    RRGK  V   + +  AI+ G+ +LT     +SS
Sbjct: 77  RISMIAEMIHTASLVHDDV--IDEADTRRGKACVSYLHGQRKAILTGDYILT-----VSS 129

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM--KTGAL 188
                  N    ++LS      ++ ++ G+ + +   +DE  DE     ++K   KT +L
Sbjct: 130 MALAAIGNKDVVILLSQV----IEDLVRGEFMQLGTKEDE--DERFAHYLKKTFKKTASL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  +C + A+++ +S++ +E    +G+NLGI FQL DD+LD
Sbjct: 184 LAHSCRAVAVLSGSSKDVQEVAYQYGKNLGIAFQLVDDMLD 224


>gi|289581060|ref|YP_003479526.1| polyprenyl synthetase [Natrialba magadii ATCC 43099]
 gi|289530613|gb|ADD04964.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099]
          Length = 280

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 13/184 (7%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK++R  +              A+  G  IE +H  SL+ DD+  +D   +RRG  +
Sbjct: 36  LSGGKRVRPMVTILACETVGGTAEDAVEFGVGIELVHNASLVIDDI--IDRSELRRGTES 93

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
              ++    AII  +GLL  AF++ +S    ++    S + L +     L  M       
Sbjct: 94  AWAEFGYGPAIITSDGLLGEAFDLFASDPDAMRVVTESMVELGVGEATELSAMPS----- 148

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                 +E +   + + KTGAL   A E GAI A +     E L  + E +GI FQ+ DD
Sbjct: 149 ------NEEEYMTLARRKTGALFRAAAELGAIAADSDAVTVEALGEYAERVGIAFQIRDD 202

Query: 227 LLDC 230
           +LD 
Sbjct: 203 VLDA 206


>gi|195341723|ref|XP_002037455.1| GM12094 [Drosophila sechellia]
 gi|194131571|gb|EDW53614.1| GM12094 [Drosophila sechellia]
          Length = 461

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 249 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 300

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 332


>gi|225461848|ref|XP_002285665.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 421

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 23/226 (10%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68
            + + DDL  L Q    +    N  L+SA       GGK++R    FLV+   A +  + 
Sbjct: 103 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 162

Query: 69  HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    A++AG+ +   
Sbjct: 163 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 220

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
           +   ++        N+ +  ++ L   + ++    G++      F   ++  +  +    
Sbjct: 221 SSWYLA--------NLENLEVIKLISQV-IKDFASGEIKQASSLFDCELELEEYLLKSFY 271

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  + +  AI +    N  E++  +G NLG+ FQ+ DD+LD
Sbjct: 272 KTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILD 317


>gi|147844134|emb|CAN80568.1| hypothetical protein VITISV_004505 [Vitis vinifera]
          Length = 421

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 23/226 (10%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68
            + + DDL  L Q    +    N  L+SA       GGK++R    FLV+   A +  + 
Sbjct: 103 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 162

Query: 69  HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    A++AG+ +   
Sbjct: 163 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 220

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
           +   ++        N+ +  ++ L   + ++    G++      F   ++  +  +    
Sbjct: 221 SSWYLA--------NLENLEVIKLISQV-IKDFASGEIKQASSLFDCELELEEYLLKSFY 271

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  + +  AI +    N  E++  +G NLG+ FQ+ DD+LD
Sbjct: 272 KTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILD 317


>gi|323143046|ref|ZP_08077750.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei
           YIT 12066]
 gi|322417147|gb|EFY07777.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei
           YIT 12066]
          Length = 323

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 18/192 (9%)

Query: 49  GGKKIRSFLVTECASL---FNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  LV   + L   +     TA+ ++ A +E +H  +LIHDD+  +DN  +RRG+
Sbjct: 43  GGKRMRPALVLLASHLLPSYTDEEETAVCKLAAGVELLHTATLIHDDV--IDNSLMRRGR 100

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PT++       A++AG+ + T  F  I         +++   +LS+  +  L  ++ G++
Sbjct: 101 PTLNSTSGNHVAVLAGDYMFTRCFATIK--------DLKKADVLSIISDT-LATLVTGEL 151

Query: 165 LDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             +++E    I     +     KTGAL   +  + A+     +     L+ +G  LG  F
Sbjct: 152 DQLKNEGDVNISVEDYYTTIYCKTGALFELSASAPAVYLGEEEKYITALKNYGRYLGNAF 211

Query: 222 QLADDLLDCEED 233
           Q+ DD LD   D
Sbjct: 212 QIIDDCLDYSSD 223


>gi|302142790|emb|CBI20085.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 23/226 (10%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS---FLVTEC-ASLFNVN 68
            + + DDL  L Q    +    N  L+SA       GGK++R    FLV+   A +  + 
Sbjct: 102 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 161

Query: 69  HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    A++AG+ +   
Sbjct: 162 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 219

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
           +   ++        N+ +  ++ L   + ++    G++      F   ++  +  +    
Sbjct: 220 SSWYLA--------NLENLEVIKLISQV-IKDFASGEIKQASSLFDCELELEEYLLKSFY 270

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  + +  AI +    N  E++  +G NLG+ FQ+ DD+LD
Sbjct: 271 KTASLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILD 316


>gi|28198534|ref|NP_778848.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1]
 gi|71274823|ref|ZP_00651111.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon]
 gi|71902480|ref|ZP_00684417.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
 gi|170729932|ref|YP_001775365.1| trans-hexaprenyltranstransferase [Xylella fastidiosa M12]
 gi|182681213|ref|YP_001829373.1| polyprenyl synthetase [Xylella fastidiosa M23]
 gi|28056618|gb|AAO28497.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1]
 gi|71164555|gb|EAO14269.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon]
 gi|71727796|gb|EAO30052.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
 gi|167964725|gb|ACA11735.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa M12]
 gi|182631323|gb|ACB92099.1| Polyprenyl synthetase [Xylella fastidiosa M23]
          Length = 333

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L                ++ A IE IH  +L+HDD+  +D   +RR + T +
Sbjct: 54  GGKRLRPMLTMLAGHAIGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTAN 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++    T+L +    Q++   T+ I    +L  Q+L + 
Sbjct: 112 ALWGNAPSVLVGDFLYSRSFQLM----TELANLEVMQILAETTNRISEGEVL--QLLHVH 165

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DET    + + KT  L   A + GA+ +HA    + R+  +G  LG  FQ+ DD+L
Sbjct: 166 NPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVL 225

Query: 229 D 229
           D
Sbjct: 226 D 226


>gi|218708400|ref|YP_002416021.1| octaprenyl-diphosphate synthase [Vibrio splendidus LGP32]
 gi|218321419|emb|CAV17369.1| Octaprenyl-diphosphate synthase [Vibrio splendidus LGP32]
          Length = 323

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 12/224 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69
           K I T+  + + +    +Q Q N    L++ + + ++  GGK++R  L    A       
Sbjct: 4   KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +   A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+
Sbjct: 64  EAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQ 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++++  +     +R   ++S + N+  +G +  Q+++  +    E     +   KT  L 
Sbjct: 122 MMTTLGS-----LRILELMSESVNVIAEGEVQ-QLMNCNNPDTTEESYMQVIYSKTARLF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + GAI+  +S   +  ++ +G+ LG  FQL DD++D   D
Sbjct: 176 EAATQIGAILTESSPEIETAMQNYGKYLGTAFQLIDDVMDYTAD 219


>gi|123968209|ref|YP_001009067.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. AS9601]
 gi|123198319|gb|ABM69960.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. AS9601]
          Length = 323

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 19/221 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTA 72
           ++  LDDL+L+  + +   H     +A      GGK++R     L+++  S         
Sbjct: 11  VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTTKH 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A   ++
Sbjct: 71  KRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188
           +      DN+    +LS      +  +  G++    + F D  Q F   I K   KT +L
Sbjct: 129 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 178

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD
Sbjct: 179 IANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILD 219


>gi|78184893|ref|YP_377328.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9902]
 gi|78169187|gb|ABB26284.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9902]
          Length = 323

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  +V   +     +  LT    R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRIRPGIVLLISRALAADGELTPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH ++D   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLY---RF 158

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D    F  ET  F     KT +L+  +  +  +++  +  E + L  FG  LG+ FQ+ D
Sbjct: 159 DTSQSF--ET-YFEKSYCKTASLIANSSRAAGVLSECNPQELDSLYQFGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|309790120|ref|ZP_07684693.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
 gi|308227845|gb|EFO81500.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
          Length = 358

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 10/165 (6%)

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           + ++H+  +   A+ E IH  SL+HDDL  +D    RRG+ TVH ++D   A++ G+   
Sbjct: 98  YQLSHV--IHAAASAELIHAASLVHDDL--VDQAARRRGRVTVHARWDNDVALMVGD--- 150

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
              F  ++S +  L  + R     +    + ++G L   M+    E     Q F     K
Sbjct: 151 --YFFALASAEMSLSPDPRIITFYAQAVQVIVEGELSPVMVAEPAE-TARRQYFYKTGAK 207

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T  L   AC++G       + +   L  +G ++G+ FQ+ DD+LD
Sbjct: 208 TAVLFEAACKAGMAAGGGDEAQIAALAGYGFDVGVAFQIVDDVLD 252


>gi|290968407|ref|ZP_06559947.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781594|gb|EFD94182.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L]
          Length = 337

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 21/188 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GK IR  LV    S F   +  A     +  A IE  H  SLIHDD+  +D   +RRGKP
Sbjct: 55  GKMIRPRLVIMAGS-FGKRYAEAEERLYKAAALIEMTHSASLIHDDI--VDEAPLRRGKP 111

Query: 106 TVHIQYDEVTAIIAGNGLLTY-AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           +V  +Y +  A+ AG+ L++   + ++     Q      S ++L+      ++ M  G++
Sbjct: 112 SVQRRYGKSAAVYAGDFLMSRITYHLMQEGLMQ------SGMVLAKA----VEAMCAGEI 161

Query: 165 LDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                 +  D T    +Q +  KT AL   AC  GA+ +   ++   RL   GE LG +F
Sbjct: 162 TQALCRYRADVTLAEYLQNIYGKTVALFRAACRMGALESGCDESLIRRLENVGEALGYMF 221

Query: 222 QLADDLLD 229
           Q+ DDLLD
Sbjct: 222 QMRDDLLD 229


>gi|242091495|ref|XP_002441580.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
 gi|241946865|gb|EES20010.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
          Length = 406

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTEC-ASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+   A L  ++ LT    R+   IE IH  SLIHDD+  +D+  +RR
Sbjct: 124 GGKRLRPALVFLVSRATAELAALSELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRR 181

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T+H  Y    A++AG+ +   +   ++        N+ +  ++ L   + ++    G
Sbjct: 182 GKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------NLENIEVIKLISQV-IKDFASG 232

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++      F   +      +    KT +L+  +  S AI +       E++  +G NLG+
Sbjct: 233 EIKQASTLFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSGMDTTICEQMYEYGRNLGL 292

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 293 SFQVVDDILD 302


>gi|15672163|ref|NP_266337.1| prenyl transferase [Lactococcus lactis subsp. lactis Il1403]
 gi|12723034|gb|AAK04279.1|AE006256_1 prenyl transferase [Lactococcus lactis subsp. lactis Il1403]
          Length = 326

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 22/195 (11%)

Query: 44  RYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++A  GGK +R  L    A +    + +    +++ A++E +H  +LIHDD+  +D+  +
Sbjct: 39  KFASRGGKMVRPALFLLFAGIVPNGSKDEEKIIKIAASLEMLHSATLIHDDI--IDDSPL 96

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRG P++  Q+ +  A+ AG+ + T  FE++    +  + +  N +S           ++
Sbjct: 97  RRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQS-----------MK 145

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +L G++  +Q  F          K    KT  L+  +C  G   A   +  +   R  G
Sbjct: 146 KILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIG 205

Query: 215 ENLGIIFQLADDLLD 229
             +G+ FQ+ DD+L+
Sbjct: 206 RAIGLAFQVYDDILN 220


>gi|281490672|ref|YP_003352652.1| polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281374441|gb|ADA63962.1| Polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 326

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 22/195 (11%)

Query: 44  RYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++A  GGK +R  L    A +    + +    +++ A++E +H  +LIHDD+  +D+  +
Sbjct: 39  KFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPL 96

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRG P++  Q+ +  A+ AG+ + T  FE++    +  + +  N +S           ++
Sbjct: 97  RRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQS-----------MK 145

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +L G++  +Q  F          K    KT  L+  +C  G   A   +  +   R  G
Sbjct: 146 KILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIG 205

Query: 215 ENLGIIFQLADDLLD 229
             +G+ FQ+ DD+L+
Sbjct: 206 RAIGLAFQVYDDILN 220


>gi|157127995|ref|XP_001661265.1| trans-prenyltransferase [Aedes aegypti]
 gi|108882325|gb|EAT46550.1| trans-prenyltransferase [Aedes aegypti]
          Length = 249

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D  + RRGKP+V++ ++      AG+ +L  A  +++  K    
Sbjct: 4   EMIHTASLVHDDV--IDQSFARRGKPSVNVIWNHKKVTQAGDYVLAVASMLLARLKHDEV 61

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            +I SQ++  L     +Q  LG +  + ++E       F     KT +L+  + ++ A++
Sbjct: 62  THILSQVLTDLVQGEFMQ--LGSK--ETENERF--AHYFTKTYRKTASLIANSLKAVAVL 115

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A +   E    +G NLG+ FQ  DDLLD
Sbjct: 116 SGADEQMVELSFQYGRNLGLAFQFVDDLLD 145


>gi|326405759|gb|ADZ62830.1| polyprenyl transferase [Lactococcus lactis subsp. lactis CV56]
          Length = 326

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 22/195 (11%)

Query: 44  RYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++A  GGK +R  L    A +    + +    +++ A++E +H  +LIHDD+  +D+  +
Sbjct: 39  KFASRGGKMVRPALFLLFAGIVPNGSKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPL 96

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           RRG P++  Q+ +  A+ AG+ + T  FE++    +  + +  N +S           ++
Sbjct: 97  RRGLPSIESQFGKDVAVYAGDFVYTVYFELLIETMNGTSFVAKNAQS-----------MK 145

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +L G++  +Q  F          K    KT  L+  +C  G   A   +  +   R  G
Sbjct: 146 KILQGELTQMQSAFDKNNTARRYMKAISGKTAELLSLSCLEGVYFAGGDKKLQHSARKIG 205

Query: 215 ENLGIIFQLADDLLD 229
             +G+ FQ+ DD+L+
Sbjct: 206 RAIGLAFQVYDDILN 220


>gi|170695309|ref|ZP_02886455.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
 gi|170139709|gb|EDT07891.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
          Length = 330

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPALLLLVAGALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++          +R   +L+   NI  +G +  Q+L++ 
Sbjct: 109 ALFGNAASVLVGDFLYSRSFQMMVGVG-----KMRVMEILAEATNIISEGEVL-QLLNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A + GA++A A    +     FG  +G  FQ+ DD L
Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAAQLGAVLAGADARIEAAAAEFGRRIGTAFQIMDDWL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|302537967|ref|ZP_07290309.1| polyprenyl diphosphate synthase [Streptomyces sp. C]
 gi|302446862|gb|EFL18678.1| polyprenyl diphosphate synthase [Streptomyces sp. C]
          Length = 326

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 35  GGKAVRPALALLSAEAAGAAAEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 92

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T        +L  +       + ++ GQ  DI 
Sbjct: 93  KVHGPALAILVGDALFALANEVLLELGTVEAGRATRRLTTAS------RKLIDGQAQDIS 146

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  +   GA++  A     ++L  +G +LG+ FQ  D
Sbjct: 147 YEHRERVSVQECLEMEGNKTGALLACSVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVD 206

Query: 226 DLL 228
           DLL
Sbjct: 207 DLL 209


>gi|195575272|ref|XP_002105603.1| GD16491 [Drosophila simulans]
 gi|194201530|gb|EDX15106.1| GD16491 [Drosophila simulans]
          Length = 461

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 249 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 300

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 332


>gi|186682243|ref|YP_001865439.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
 gi|186464695|gb|ACC80496.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
          Length = 323

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L++    L         R+    E IH  SL+HDD+  +D   +RRG P
Sbjct: 44  GGKRIRPAIVLLISRATMLEQDITPRHRRLAEITEMIHTASLVHDDV--VDESDVRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH  +    AI+AG+ L   +   +++        + S++++ L      QG      L
Sbjct: 102 TVHSLFGNRIAILAGDFLFAQSSWYLANLDNLEVVKLLSEVIMDLATGEIQQG------L 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  I           KT +L+  + ++  +++  S+   E L  +G + GI FQ+ D
Sbjct: 156 NRFDAGISIETYLQKSYYKTASLIANSSKAAGLLSEVSRETVEHLYSYGRHFGIAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|330508568|ref|YP_004384996.1| polyprenyl synthetase [Methanosaeta concilii GP-6]
 gi|328929376|gb|AEB69178.1| polyprenyl synthetase [Methanosaeta concilii GP-6]
          Length = 311

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 13/178 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  ++   A         ++    AIE +H  SL+HDD+  +D+G  RRG P+   
Sbjct: 39  GKRVRPLILILSAEALGTPPAQSISAALAIELVHAASLVHDDI--LDHGIERRGSPSALE 96

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++    +++AG+ L++ + ++IS     +   IR+        +     M  G+++D+  
Sbjct: 97  RFGPEASLLAGDWLISRSIDLISGYSQPV---IRA-------FSRACMDMSEGELMDLSC 146

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               E     I + KT +L   + + G +++ A + +  RL  +G +LG+ +Q+ DDL
Sbjct: 147 AGSPEDYYQCITR-KTASLFSASAKIGGLISGAGEEDVARLESYGLHLGLGYQVLDDL 203


>gi|260436153|ref|ZP_05790123.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109]
 gi|260414027|gb|EEX07323.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109]
          Length = 323

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   +   +    L+    R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLLSRALSAQGELSPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH ++D   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTA 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + +++++        KT +L+  +C +  +++  S ++ + L  FG  LG+ FQ+ D
Sbjct: 162 QTFETYLEKSYC------KTASLIANSCRAAGVLSGCSPSQLDSLYQFGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|167752314|ref|ZP_02424441.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216]
 gi|167660555|gb|EDS04685.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216]
          Length = 329

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)

Query: 45  YALLG-GKKIRSFLVTECASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           YAL   GK IR   V   A+L          L AL     +E IH  SLIHDD+  +D  
Sbjct: 39  YALSARGKGIRPMTVLLSAALNAPAGQRSGGLRALLAATLVEMIHVASLIHDDV--IDES 96

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG+ +V+ ++    A++ G+ +L    ++           ++S     +TH  G   
Sbjct: 97  DMRRGRASVNARWQSRNAVVVGDYILAKNMDL----------GLKSGQFDLVTHVCGAIA 146

Query: 159 ML-GGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            L  G++L      + E    + + +I K KT  L+  +  +GA+   AS+ ++  +R F
Sbjct: 147 TLCEGEILQNDKANRQEMTRASYLDIIYK-KTACLIGVSASAGALAVGASREKQALMRKF 205

Query: 214 GENLGIIFQLADDLLD 229
           GE++G+ FQ+ DD+LD
Sbjct: 206 GESIGMAFQIQDDILD 221


>gi|296120422|ref|YP_003628200.1| trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM
           3776]
 gi|296012762|gb|ADG66001.1| Trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM
           3776]
          Length = 338

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
            D L  A R+    GK++R  LV   A      + T   + A +E IH  +L+HDD+  +
Sbjct: 49  KDILQHATRFR---GKRLRPILVLLSARACGEVNETHRLLAAVVEMIHIATLVHDDV--L 103

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D    RR   TV+ +++  T+++ G+ L T+AF + S    +L  +   +++   T+ + 
Sbjct: 104 DEASTRRHVATVNARWNNETSVLFGDYLFTHAFHLAS----ELPTSHACRIIGRATNKV- 158

Query: 156 LQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
                 G++  I +     ++E   F I   KT  L   +   GA  A         +  
Sbjct: 159 ----CEGELTQIHERGNLDLNEETYFKIINGKTAELTAVSAYLGAHYADQPAEVVNAVEA 214

Query: 213 FGENLGIIFQLADDLLD 229
           +G  LG+ FQ+ADDLLD
Sbjct: 215 YGRKLGLAFQIADDLLD 231


>gi|332879986|ref|ZP_08447670.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681982|gb|EGJ54895.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 326

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 21/204 (10%)

Query: 39  LLSAIRYALLG--GKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPS 94
           LL+ I Y ++   GK++R   +   A + +   +T    R  + IE IH  +L+HDD+  
Sbjct: 32  LLNRITYYIVNRKGKQMRPMFIFLVAKMLSGGKVTERTYRGASVIELIHTATLVHDDV-- 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D+   RRG  +++  +    A++ G+ LL+    ++S       DN    L+  ++  +
Sbjct: 90  VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS--V 140

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA--IMAHASQNEKER 209
            ++ M  G++L ++      I E   + + + KT  L+   C  GA  +M +A +   E+
Sbjct: 141 AVREMSEGELLQMEKARRLDIVEEVYYEVIRQKTATLIAACCAMGACSVMPNAPE-LIEK 199

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +R FGE +G+ FQ+ DDL D  ED
Sbjct: 200 MRLFGEYIGMAFQIKDDLFDYTED 223


>gi|297563981|ref|YP_003682954.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848430|gb|ADH70448.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 334

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 36/240 (15%)

Query: 1   MNGGLPSKLQENSKRIDTIL-------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKI 53
           ++  L  ++Q+N ++++ +L       D LL + ASH        LL+A      GGK+ 
Sbjct: 15  VDDALAREVQDNLEKVEDLLRESVASSDPLLTEAASH--------LLAA------GGKRF 60

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           R+ LV   A   + +    +   A +E  H  +L HDD+  MD   +RRG+P+ + ++  
Sbjct: 61  RATLVLLAAHFGDPSVPDLIPAAAVVELTHVATLYHDDV--MDEAELRRGEPSANQRWGN 118

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEF 171
             AI+ G+ +   A E+++   T+    +R Q             ++ GQ+L+     E 
Sbjct: 119 SVAILTGDYVFARASEMLADLGTE---AVRLQATT-------FGRLVQGQILETSGPQEG 168

Query: 172 IDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            D    ++ +   KT +L+  + E G +           +    + LG+ FQLADDLLD 
Sbjct: 169 TDPLDHYLRVISDKTASLIASSAEFGGMFGKVDPETIGTVTRACDALGMAFQLADDLLDV 228


>gi|270001562|gb|EEZ98009.1| hypothetical protein TcasGA2_TC000408 [Tribolium castaneum]
          Length = 339

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 21/209 (10%)

Query: 32  QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-------HLTALRVGAAI-ECI 82
           ++ + D L     Y   G GK IR  +    A   N +        LT+ R  A I E I
Sbjct: 37  RSTYQDDLYEIATYYFDGHGKAIRPMVAILMARAINYHIYKEKSGLLTSQREVAMISEMI 96

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+HDD+  +D    RRGKP+V++ ++     +AG+ +L  A  +I+  K      +
Sbjct: 97  HTASLVHDDV--IDQSDFRRGKPSVNVMWNHKKVTMAGDFILAVASIMIARLKNNDVTLV 154

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMA 200
            SQ++  L     +Q  LG +      E  +E     + K   KT +L+  + +S  ++A
Sbjct: 155 LSQVVSDLVQGEFMQ--LGSK------ETENERFAHYLTKTYRKTASLIANSVKSVTMLA 206

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
            A +   +    +G NLG+ FQL DDLLD
Sbjct: 207 GADEQLSDISYQYGRNLGLAFQLVDDLLD 235


>gi|225851044|ref|YP_002731278.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]
 gi|225645501|gb|ACO03687.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]
          Length = 320

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  LV   + L    N      +  A+E +H  SL+HDD+  +D    RRGK   
Sbjct: 38  GGKRLRPVLVLTFSKLLKGENEERDYPIAVAMEYLHTASLLHDDV--VDGAETRRGKAAA 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +   T ++ G+ +   A  + S         +   + +    +  ++ M  GQ+L++
Sbjct: 96  NRVFGNDTTVLTGDYMYANALYLFS---------VYGDIDMIRNVSDAVKKMSEGQLLEL 146

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   D  + E   F I + KT  L    C  G  +   S  +K+    +G ++GI FQL 
Sbjct: 147 KKIGDIDMREEDYFRILEGKTAVLFGSCCYVGTALGGGSDKQKKSAYNYGLSIGIAFQLI 206

Query: 225 DDLLD 229
           DDLLD
Sbjct: 207 DDLLD 211


>gi|24651612|ref|NP_733425.1| CG31005 [Drosophila melanogaster]
 gi|23172761|gb|AAF57135.2| CG31005 [Drosophila melanogaster]
 gi|201065485|gb|ACH92152.1| FI02023p [Drosophila melanogaster]
          Length = 436

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 249 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 300

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 332


>gi|194336606|ref|YP_002018400.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309083|gb|ACF43783.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 324

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 26/196 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  +V   A L    + ++ R    +E +H  +LIHDD+  +D   +RRG  +++ 
Sbjct: 44  GKQIRPAMVLLAAQLCGGVNESSYRAAIMVELLHSATLIHDDV--VDGAEMRRGLASINA 101

Query: 110 QYDEVTAIIAGNGLLT----YAFEIISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQ 163
            +    +++ G+ LL+    Y+ E         KD           H +   ++ M  G+
Sbjct: 102 LWKNKISVLIGDYLLSKGLLYSLE--------YKD-------YGFLHMVSEAVRRMSEGE 146

Query: 164 MLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +  IQ      I E     +   KT +L+  AC  GA+ A   +     L+ +GE LG+ 
Sbjct: 147 IFQIQKTRSLDISEADYLSVIADKTASLISSACAMGAMSATTDEVRIAALKSYGEYLGLA 206

Query: 221 FQLADDLLDCEEDLPK 236
           FQ+ DDLLD   D  K
Sbjct: 207 FQIRDDLLDYTGDSKK 222


>gi|288917197|ref|ZP_06411566.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f]
 gi|288351388|gb|EFC85596.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f]
          Length = 338

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  +V   A   +      +    AIE  H  +L HDD+  MD   +RRG  + +
Sbjct: 54  GGKRFRPMVVLLAAQFADPEAAGVVPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASAN 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    AI+ G+ L   A EI +        ++  +    L   I    +  GQ+ +  
Sbjct: 112 ARWTNTVAILTGDFLFARASEITA--------DLGPEATRILARTIAT--LCEGQIRETV 161

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                + Q+     +   KT +L+  +   GA++A A +   + L  FGE  G+ FQL+D
Sbjct: 162 GPGPGQNQIEHYLRVITDKTASLIATSGRLGAMLAGADRVTADVLAAFGERFGVAFQLSD 221

Query: 226 DLLD 229
           D++D
Sbjct: 222 DIID 225


>gi|307150008|ref|YP_003885392.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822]
 gi|306980236|gb|ADN12117.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822]
          Length = 323

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLV--TECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  LV     A++ + +     R  A I E IH  SL+HDD+  +D   +RR  P
Sbjct: 44  GGKRIRPALVLLVSRATMLDQDITPRHRRLAEITEMIHTASLVHDDV--VDEAELRRNVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV+  +D   A++AG+ L   +   +++      DN+    +LS       +G +  Q +
Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEVIRDFAEGEIQ-QGI 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           ++ D  I           KT +LM  + ++ A+++   +   E L  +G  LG+ FQ+ D
Sbjct: 156 NLFDTGITLEAYLEKSYYKTASLMANSAKAAAVLSDVPREVTEHLYNYGRYLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|168019710|ref|XP_001762387.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686465|gb|EDQ72854.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 356

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 20/190 (10%)

Query: 49  GGKKIRS---FLVTECA-SLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R    FLV+     L N+  L     R+    E IH  SLIHDD+  +D    RR
Sbjct: 74  GGKRMRPALVFLVSRATCQLSNIQELRPQHRRLAEITEMIHTASLIHDDV--LDESDTRR 131

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TVH  +    A++AG+ +   +   ++        N+ +  ++ L   + ++    G
Sbjct: 132 GKETVHQTFGTRVAVLAGDFMFAQSSWYLA--------NLDNLEVIKLISQV-IRDFASG 182

Query: 163 QMLDIQDEFIDET--QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++   Q+ F  E   Q ++ +   KT +L+  + +S AI + ++ +   ++  +G +LG+
Sbjct: 183 EIKQAQNLFDTEVTLQNYLDKSYYKTASLIASSTKSAAIFSDSTSSVSNQMFDYGMHLGL 242

Query: 220 IFQLADDLLD 229
            FQ+ DD+LD
Sbjct: 243 AFQVVDDILD 252


>gi|34541591|ref|NP_906070.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
 gi|34397908|gb|AAQ66969.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
          Length = 292

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 50  GKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  L    A++     + T L     +E IH  +LIHDD+  +D    RRG PT++
Sbjct: 13  GKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDV--IDMASTRRGVPTLN 70

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QMLDI 167
             +D   A++ G+ +L+ A       +    ++IR   ++++   +G +   G  +  + 
Sbjct: 71  AFFDNRVAVLMGDFVLSSAL-----MRAIALNDIR---IITIISRLGRELSEGEIRQFET 122

Query: 168 QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            D+ I +  ++M + + KT  L     E GAI   A     ER++  GE LG  FQ+ DD
Sbjct: 123 ADKVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVERVKRVGELLGYAFQIRDD 182

Query: 227 LLD 229
           + D
Sbjct: 183 IFD 185


>gi|282162726|ref|YP_003355111.1| polyprenyl synthetase [Methanocella paludicola SANAE]
 gi|282155040|dbj|BAI60128.1| polyprenyl synthetase [Methanocella paludicola SANAE]
          Length = 285

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 24/205 (11%)

Query: 37  DRLLSA-----IRYAL-----LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
           DR++SA     IR ++       GK++R   V   A +       A     A+ECIH  S
Sbjct: 15  DRIISAVELPEIRMSIAHSLKTAGKRLRPVSVLLLAEMNGGRADDATDAALAMECIHTAS 74

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LI DD+  +D G  RRG+ T H ++    A+++G+ L++ A  ++S      K + ++ L
Sbjct: 75  LIQDDI--VDEGLKRRGEDTSHEKFGMFLAMVSGDYLISRAMMLMS------KYDEKTIL 126

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQ 204
             S     GL  M  G++LD++      T+   ++  + KT  +   + E GA +A A +
Sbjct: 127 AFS---KAGLY-MAEGELLDVKSRKYKPTEADYVECVRKKTAIMFESSFEMGARIAGADE 182

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
              E  R  G   GI +Q+ DDL++
Sbjct: 183 KHAELCRLMGMEFGIAYQIVDDLIE 207


>gi|16329171|ref|NP_439899.1| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803]
 gi|15214189|sp|P72580|PREA_SYNY3 RecName: Full=Prenyl transferase
 gi|14595182|dbj|BAA16579.2| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803]
          Length = 323

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 19/188 (10%)

Query: 49  GGKKIRS--FLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R    L+   A+L +   LTA   R+    E IH  SL+HDD+  +D   +RR  
Sbjct: 44  GGKRVRPAIVLLVSRATLLD-QELTARHRRLAEITEMIHTASLVHDDV--VDEADLRRNV 100

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PTV+  +D   A++AG+ L   +   +++      DN+    +LS      ++    G++
Sbjct: 101 PTVNSLFDNRVAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEV----IRDFAEGEI 151

Query: 165 LDIQDEFIDETQV-FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           L   + F  +T +   ++K   KT +L+  + ++  +++ A ++  + L  +G++LG+ F
Sbjct: 152 LQSINRFDTDTDLETYLEKSYFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QIVDDILD 219


>gi|114778283|ref|ZP_01453142.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1]
 gi|114551385|gb|EAU53941.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1]
          Length = 325

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 16/211 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+ T  H   Q +  ++ AI + ++  GGK++R  L    A LF       + +   +E 
Sbjct: 18  LVDTCIHENLQSDIMMIPAIGHYIVNSGGKRLRPLLTLLTARLFGYQGKRHVPLSVVVEF 77

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SL+HDD+  +D+   RRG P+ +  +    +++ G+ L + AF+++ S      D 
Sbjct: 78  IHTASLLHDDV--VDSSDQRRGAPSANGVWGNQASVLVGDYLFSRAFQMMVSD----GDM 131

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198
           +  +LM  +T+ +       G++L +   F   + E +   + + KT  L   A E GA 
Sbjct: 132 VMLKLMSDVTNALA-----EGEVLQLSRTFHLEMTEAECLEVIERKTAVLFKAATEVGAH 186

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +A  S      +  +G  LG+ FQL DD LD
Sbjct: 187 VAGQSAQTIAAMAEYGMCLGVAFQLMDDALD 217


>gi|295677741|ref|YP_003606265.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002]
 gi|295437584|gb|ADG16754.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002]
          Length = 330

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++   
Sbjct: 77  LAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDFLYSRSFQMMVGV 134

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  +R   +LS   NI  +G +  Q+L++ D  +DE +   + + KT  L   A +
Sbjct: 135 G-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIRYKTAKLFEAAAQ 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GA++A A    +     +G  +G  FQ+ DD LD
Sbjct: 189 LGAVLAGADAKTEAAAAEYGRRIGTAFQIMDDWLD 223


>gi|241664241|ref|YP_002982601.1| polyprenyl synthetase [Ralstonia pickettii 12D]
 gi|240866268|gb|ACS63929.1| Polyprenyl synthetase [Ralstonia pickettii 12D]
          Length = 325

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 46  GGKRLRPVILLLVANALGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        +++R   +L+   NI  +G +  Q+L++ 
Sbjct: 104 AVFGNAASVLVGDFLYSRAFQMMVQA-----NSMRIMQILADATNIISEGEVL-QLLNMH 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   + + KT  L   A + GA+++ A    +E    +G  +G  FQ+ DDLL
Sbjct: 158 DPDVTEERYLQVIRYKTAKLFEAAAQIGAVLSGAGAAIEEAAAEYGRRIGTAFQIIDDLL 217

Query: 229 D 229
           D
Sbjct: 218 D 218


>gi|257456101|ref|ZP_05621302.1| polyprenyl synthetase family protein [Treponema vincentii ATCC
           35580]
 gi|257446487|gb|EEV21529.1| polyprenyl synthetase family protein [Treponema vincentii ATCC
           35580]
          Length = 334

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 13/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  L      L   +      +   IE IH  SLIHDD+   DN  +RRG+P  H
Sbjct: 48  GGKRWRPLLAVLAYQLAGGSGEEIYTLTPLIEGIHTASLIHDDIE--DNSELRRGQPAAH 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDI 167
           + Y   +A+ +G+ L   A   + + +     N++  L  + LTH   ++ +  GQ LDI
Sbjct: 106 VAYGLDSALNSGSWLYFQALGSLEAYRAPA--NVKLDLYAAALTH---IRALHEGQALDI 160

Query: 168 QDE-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
                   F        + ++KTGAL   A  +G   A  +  E        E  G+ FQ
Sbjct: 161 HWHRTAGFFPSRKDYERMIRLKTGALAALAAYTGMRAAGKAHEESAAFASLFEAAGVGFQ 220

Query: 223 LADD 226
           + DD
Sbjct: 221 ILDD 224


>gi|161525972|ref|YP_001580984.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349309|ref|YP_001944937.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC
           17616]
 gi|221213256|ref|ZP_03586231.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD1]
 gi|160343401|gb|ABX16487.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333331|dbj|BAG42401.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC
           17616]
 gi|221166708|gb|EED99179.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD1]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRETAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223

Query: 229 D 229
           D
Sbjct: 224 D 224


>gi|221202398|ref|ZP_03575430.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD2M]
 gi|221208142|ref|ZP_03581147.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD2]
 gi|221172045|gb|EEE04487.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD2]
 gi|221177675|gb|EEE10090.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD2M]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRETAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +    +++ G+ L + +FE+ +   K ++ D      +LS    I  +G +  Q+L++
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVGKMRVMD------ILSEATTIISEGEVL-QLLNM 162

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD 
Sbjct: 163 HDADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDW 222

Query: 228 LD 229
           LD
Sbjct: 223 LD 224


>gi|15837992|ref|NP_298680.1| octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c]
 gi|9106399|gb|AAF84200.1|AE003970_7 octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c]
          Length = 332

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L                ++ A IE IH  +L+HDD+  +D   +RR + T +
Sbjct: 53  GGKRLRPMLTMLAGHAIGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++    T+L +    Q++   T+ I    +L  Q+L + 
Sbjct: 111 ALWGNAPSVLVGDFLYSRSFQLM----TELANLEVMQILAETTNRISEGEVL--QLLHVH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DET    + + KT  L   A + GA+ +HA    + R+  +G  LG  FQ+ DD+L
Sbjct: 165 NPDTDETTYLRVIERKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|312131592|ref|YP_003998932.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908138|gb|ADQ18579.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 14/187 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR   V   A        +  R  A IE +H  +L+HDD+  +D    RRG  +V+ 
Sbjct: 46  GKQIRPMFVFLTAGALGGIKESTYRGAALIELLHTATLVHDDV--VDEANYRRGFFSVNA 103

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL     ++S              +L +  +  ++ M  G++L I+ 
Sbjct: 104 LWKNKIAVLVGDYLLAKGL-LLSVENEDFN-------LLKIV-STAVREMSEGELLQIEK 154

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                I E   + + + KT  L+   C  GA  A  +  E E+ R  GE +G+ FQ+ DD
Sbjct: 155 ARKLDITEEVYYEVIRQKTATLIAACCAVGAASADRTPEEVEKARLLGEKIGMAFQIKDD 214

Query: 227 LLDCEED 233
           L D   D
Sbjct: 215 LFDFGTD 221


>gi|195505401|ref|XP_002099488.1| GE23324 [Drosophila yakuba]
 gi|194185589|gb|EDW99200.1| GE23324 [Drosophila yakuba]
          Length = 470

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 225 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 282

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 283 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 334

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 335 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 366


>gi|261404272|ref|YP_003240513.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
 gi|261280735|gb|ACX62706.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
          Length = 334

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 11/190 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +V   +      H  A ++    +E +H  SL+HDD+  +D   +RRG PT+
Sbjct: 45  GGKRLRPLMVVLGSRFGESGHEPAVMKTAVLLEYLHMASLVHDDI--IDQSDMRRGMPTL 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-----G 162
           H   D  TA+  GN ++  A E  +       D     +     + +     L      G
Sbjct: 103 HETTDVQTAVHIGNYMIARAIEWAAGHPGGDPDGNSEDVSEDEAYRLAELAALVTELCMG 162

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +   +Q  F   +   Q     + KT  LM    ++GA  AHA     ERL  FGE+LG+
Sbjct: 163 EYDQLQHRFDFGLTMEQYLEKTRCKTALLMAHCLKAGAEAAHADAGTAERLFQFGESLGM 222

Query: 220 IFQLADDLLD 229
            FQ+ DDLLD
Sbjct: 223 AFQIRDDLLD 232


>gi|307579659|gb|ADN63628.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 309

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L                ++ A IE IH  +L+HDD+  +D   +RR + T +
Sbjct: 30  GGKRLRPMLTMLAGHAIGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++    T+L +    Q++   T+ I    +L  Q+L + 
Sbjct: 88  ALWGNAPSVLVGDFLYSRSFQLM----TELANLEVMQILAETTNRISEGEVL--QLLHVH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DET    + + KT  L   A + GA+ +HA    + R+  +G  LG  FQ+ DD+L
Sbjct: 142 NPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|238927608|ref|ZP_04659368.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531]
 gi|238884533|gb|EEQ48171.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531]
          Length = 321

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 21/197 (10%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L    A    + +   A+ V  A+E IH  SL+HDD+  +D    RRG  T 
Sbjct: 38  GGKRLRPALFLLAARGGASFDRARAMPVAVALELIHTASLVHDDV--IDEADTRRGAETT 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI++G+ +   AF++++      ++   S + + L H +    +  G++L  
Sbjct: 96  NAKWGNQVAILSGDYIFARAFKLVA------EEGYDSSVYVKLAHLVCT--LSEGEIL-- 145

Query: 168 QDEFI-----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           QD  +      E   +   + KT   +   CE G  +   S  +  ++  +G  +G+ FQ
Sbjct: 146 QDHTVYQIPTSEHAYYERIRKKTADFLEICCELGGFIGGMSPADTAQMAEYGHAIGMAFQ 205

Query: 223 LADDLLD---CEEDLPK 236
           + DDLLD     ED+ K
Sbjct: 206 ITDDLLDFRRSSEDIGK 222


>gi|194741958|ref|XP_001953476.1| GF17201 [Drosophila ananassae]
 gi|190626513|gb|EDV42037.1| GF17201 [Drosophila ananassae]
          Length = 441

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 196 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSVASIMIARLRSDDV 253

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 254 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 305

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 306 VIAQAEDNVAELAFQYGRNIGLAFQLVDDMLD 337


>gi|194904996|ref|XP_001981099.1| GG11874 [Drosophila erecta]
 gi|190655737|gb|EDV52969.1| GG11874 [Drosophila erecta]
          Length = 436

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 248

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 249 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 300

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 332


>gi|254253318|ref|ZP_04946636.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158]
 gi|124895927|gb|EAY69807.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158]
 gi|325528031|gb|EGD05253.1| polyprenyl synthetase [Burkholderia sp. TJI49]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223

Query: 229 D 229
           D
Sbjct: 224 D 224


>gi|257388648|ref|YP_003178421.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257170955|gb|ACV48714.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 344

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 39/226 (17%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIR-SFLVTECASLFNV---------------NHLTA 72
            +     + L  A RY +  GGK++R + L+    SL +V               + +  
Sbjct: 25  ELPVDEPEELYEASRYLMDAGGKRLRPTMLLLAAESLADVAPQSTDYRSFPTVEGDEIDV 84

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R    IE I  ++LIH     MD+  +RRG P VH +YD  TAI+AG+ L + AFE + 
Sbjct: 85  MRAAVGIETIQSFTLIH--DDIMDDDDLRRGVPAVHREYDLSTAILAGDTLFSKAFEYML 142

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---------DEFIDETQVFMIQKM 183
               + + ++ +   L+ T       +  GQ  DI          DE++D     M++ +
Sbjct: 143 DTGAKAERSVAATKRLAQTCT----EICEGQSFDIDFESRAEVTTDEYLD-----MVE-L 192

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT  L   +    A +  A ++  E L  +G ++G  FQ+ DDLLD
Sbjct: 193 KTAVLYAASASIPAQLMGA-EDAVEPLYGYGLDVGRAFQIQDDLLD 237


>gi|147920348|ref|YP_685879.1| putative polyprenyl synthetase [uncultured methanogenic archaeon
           RC-I]
 gi|110621275|emb|CAJ36553.1| putative polyprenyl synthetase [uncultured methanogenic archaeon
           RC-I]
          Length = 340

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 19/196 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++RS +        +     AL   AA+E +H +SLIHDD+   D    RR +PTV 
Sbjct: 55  GGKQLRSTMCLLACEAISGKFDNALPGAAAVELVHNFSLIHDDIEDGDE--TRRHRPTVW 112

Query: 109 IQYDEVTAIIAGNGLLTYAF----EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
             +    AI  G+ +   ++    E+   P+T +K       +L + ++  +Q +  GQ 
Sbjct: 113 KLWGVPQAINTGDAMDVVSYIAILELKVKPETMIK-------VLRVFNDTIMQ-LCEGQY 164

Query: 165 LDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           LD+    +     E  + MI   KT AL+  +   GA+ A   Q   +  + FG  +GI 
Sbjct: 165 LDMDFQTRKTVTVEEYIEMITG-KTAALIEASTAIGAMAATDDQKVIDHFKAFGHKIGIG 223

Query: 221 FQLADDLLDCEEDLPK 236
           FQ+ DDLL    D  K
Sbjct: 224 FQIQDDLLGIWGDPSK 239


>gi|313891223|ref|ZP_07824842.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120586|gb|EFR43706.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 326

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 45/228 (19%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           +Q ++ D   + ++ A  GGK +R    FL T        N     ++ A++E +H  +L
Sbjct: 26  VQARNTDIQEAIVQLAQAGGKYLRPAFFFLFTSFGQREKQNSEQLTKIAASLEILHMATL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-----SSPKTQLKDNI 142
           IHDD+  +D+  +RRG+ T+  Q+ +  A+  G+ L T  FE+I      SP   +K N 
Sbjct: 86  IHDDV--IDDSPLRRGQVTIQTQFGKDIAVYTGDFLFTIFFELILETMQDSP--YMKVNA 141

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-----------KTGALMCF 191
           ++           ++ +L G++        D+  ++  QK            KT  L   
Sbjct: 142 KA-----------MKKILVGEL--------DQMHLYFNQKQSIRDYLRSISGKTAELFRL 182

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           A   GA    AS     +    G ++G+ FQ+ DD+LD    E+D  K
Sbjct: 183 ASSEGAYFGGASPEVVSKAGRIGYHIGMTFQILDDILDYTAKEKDFNK 230


>gi|15606228|ref|NP_213606.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5]
 gi|2983415|gb|AAC06998.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5]
          Length = 304

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 16/190 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R       + +   +   AL +G A+E IH  SL+HDD+  +D    RRG+ + +
Sbjct: 33  GGKRLRPLFTLLVSGMCGGDPSKALPLGVALEYIHVASLLHDDV--VDRAKTRRGRESAN 90

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    A++ G+ +   +  + S+          +  M+ L   + +  M  GQ+L+I 
Sbjct: 91  LVFGNGVAVLTGDYMYAKSLHLFST--------YGNMEMIRLVSGV-VMDMAEGQVLEIS 141

Query: 169 D--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              + I E + F I   KTG L   AC     M+    + +E L   G  LG  FQL DD
Sbjct: 142 KVGDIISEEEYFQIIDGKTGVLFG-ACFGVGAMSGECGDWRE-LYEAGLRLGRAFQLIDD 199

Query: 227 LLDCEEDLPK 236
            LD E D PK
Sbjct: 200 ALDYEGD-PK 208


>gi|115350537|ref|YP_772376.1| trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD]
 gi|170699961|ref|ZP_02890988.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
 gi|172059569|ref|YP_001807221.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
 gi|115280525|gb|ABI86042.1| Trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD]
 gi|170135109|gb|EDT03410.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
 gi|171992086|gb|ACB63005.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223

Query: 229 D 229
           D
Sbjct: 224 D 224


>gi|315638153|ref|ZP_07893335.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21]
 gi|315481689|gb|EFU72311.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21]
          Length = 297

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 22/187 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GKK+RS L+   A         A  + A IE IH  SL+HDD+  +D   +RRG  +++ 
Sbjct: 30  GKKLRSKLLLSIAG----ESQKAYVLCAIIELIHLASLLHDDI--IDESELRRGARSINA 83

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
           ++    A++ G+ L + AF  +S  + ++     SQ++ +    + +     G+++D+  
Sbjct: 84  EFGAKNALMLGDILYSKAFYELSKQEAKI-----SQILSNAVCKLAI-----GELMDVNL 133

Query: 169 -DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             EF  + + ++     KT  L+  +   GA++A   +N       +G+NLG+ FQ+ DD
Sbjct: 134 SKEFNPDKEAYLTMIYHKTAVLIEASARCGALLAKLDEN---AFAKYGKNLGLAFQIVDD 190

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 191 ILDITGD 197


>gi|78065141|ref|YP_367910.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383]
 gi|77965886|gb|ABB07266.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223

Query: 229 D 229
           D
Sbjct: 224 D 224


>gi|34557907|ref|NP_907722.1| polyprenyl synthetase ) [Wolinella succinogenes DSM 1740]
 gi|34483625|emb|CAE10622.1| POLYPRENYL SYNTHETASE ) [Wolinella succinogenes]
          Length = 300

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 30/223 (13%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +RI+  + + LL+  S    Q +  L S        GK +RS L+   A         +L
Sbjct: 5   ERIEARVKEWLLEVGSKEALQMSQSLSS--------GKMLRSKLILAIAG----ESEESL 52

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + AA+E I   SL+HDD+  +D+ + RRGKP+++  +    AI+ G+   + AF  ++ 
Sbjct: 53  SLCAAVELIQSASLLHDDV--IDDAFTRRGKPSINAAFGNKNAIMLGDIFYSKAFFELT- 109

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM-IQKMKTGALMC 190
                    R   +++ T +  +  +  G++ D+     F  E  ++M + + KT +L+ 
Sbjct: 110 ---------RFSPLIARTVSHAVVRLSLGELADVTLAQTFNLEEHLYMQMIEDKTASLIE 160

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A ++ A++      + E  R +G+NLG+ FQ+ DDLLD  +D
Sbjct: 161 AAAQAAALLV---SRDSEAFRIYGKNLGLAFQIIDDLLDITQD 200


>gi|195158222|ref|XP_002019991.1| GL13744 [Drosophila persimilis]
 gi|194116760|gb|EDW38803.1| GL13744 [Drosophila persimilis]
          Length = 445

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 200 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 257

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 258 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 309

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 310 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 341


>gi|154174404|ref|YP_001408390.1| prenyl transferase [Campylobacter curvus 525.92]
 gi|112802622|gb|EAT99966.1| prenyl transferase [Campylobacter curvus 525.92]
          Length = 297

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+ A IE IH  SL+HDD+  +D+   RRGKP+++  +    +I+ G+   +  F  ++
Sbjct: 49  LRLCAIIELIHLASLLHDDV--IDDADTRRGKPSINALFGTKNSIMLGDIFYSKGFFELA 106

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCF 191
               +   NI ++L+      + +  ++    +D+ + F D+ Q +M +   KT  L+  
Sbjct: 107 ----KFSPNI-ARLVSEAVSKLSIGELMD---VDLSENFNDDKQKYMDMIYYKTAVLIEA 158

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               GAI+A   +    + R +G+NLG+ FQ+ DD+LD
Sbjct: 159 TAACGAILAGLDET---KFRIYGKNLGLAFQIIDDVLD 193


>gi|171316229|ref|ZP_02905452.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
 gi|171098643|gb|EDT43440.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223

Query: 229 D 229
           D
Sbjct: 224 D 224


>gi|107021658|ref|YP_619985.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054]
 gi|116688604|ref|YP_834227.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424]
 gi|170731903|ref|YP_001763850.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
 gi|105891847|gb|ABF75012.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054]
 gi|116646693|gb|ABK07334.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424]
 gi|169815145|gb|ACA89728.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
          Length = 331

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 223

Query: 229 D 229
           D
Sbjct: 224 D 224


>gi|198450324|ref|XP_001357936.2| GA15930 [Drosophila pseudoobscura pseudoobscura]
 gi|198130986|gb|EAL27072.2| GA15930 [Drosophila pseudoobscura pseudoobscura]
          Length = 445

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 200 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 257

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 258 TIVLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 309

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 310 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLD 341


>gi|170119528|ref|XP_001890894.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164634032|gb|EDQ98458.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 240

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 19/150 (12%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SL+HDD+  +D   +RRG P+   ++    +++ GN +L  A    S+   +L D 
Sbjct: 2   LHTASLLHDDV--IDASPLRRGAPSAPSKFGSKLSVLGGNFILGRA----STALARLGDA 55

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
             +QL+ S+  N     ++ G++L ++D+   +T   M +  ++ A++   CE G +   
Sbjct: 56  EVTQLIASVISN-----LVEGEILQMRDKTYLKTASLMAKGARS-AVVLGGCEEGEVW-- 107

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                K+    +G N+GI FQL DD+LD E
Sbjct: 108 -----KDIAYAYGRNVGIAFQLIDDILDYE 132


>gi|149173800|ref|ZP_01852429.1| polyprenyl synthase [Planctomyces maris DSM 8797]
 gi|148847330|gb|EDL61664.1| polyprenyl synthase [Planctomyces maris DSM 8797]
          Length = 330

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 14/177 (7%)

Query: 50  GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R  L+   A+     N +H     + + +E IH  +L+HDD+  +D+  IRR   T
Sbjct: 52  GKRLRPILLLLSAAATGGINESHYV---LASVVEMIHLATLVHDDV--LDDALIRRHVAT 106

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V+ +++  T+++ G+ L T+AF + +S    L D  R+  ++    N+  +G L  Q+ +
Sbjct: 107 VNSRWNNETSVLVGDFLFTHAFHLTAS----LGD-ARACRLIGRATNLVCEGELA-QIYE 160

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             +  + E Q   I   KT  L   + + GA+ A A ++  E +  +G  LG+ FQ+
Sbjct: 161 RGNHELSEEQYLEIINGKTAELCAISTQLGALYASADESIVEAMDEYGRALGVAFQI 217


>gi|150009558|ref|YP_001304301.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256838290|ref|ZP_05543800.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp.
           D13]
 gi|149937982|gb|ABR44679.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256739209|gb|EEU52533.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp.
           D13]
          Length = 324

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 13/195 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL SAI   L   GK +R  LV   A +        +     +E +H  +LIHDD+  +D
Sbjct: 32  RLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVTDNTINSAVLLELLHTATLIHDDV--ID 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG P+++  +D   +++ G+ +L+ A  +I S +T    ++R   ++ +  N+G 
Sbjct: 90  ETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GDLR---IVGIISNLGR 141

Query: 157 QGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
               G   Q+   ++  +DE     + K KT  L+    E GAI + AS       R FG
Sbjct: 142 DLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGAISSGASAEVIALCREFG 201

Query: 215 ENLGIIFQLADDLLD 229
           E LG  FQ+ DD+ D
Sbjct: 202 EYLGYCFQIKDDIFD 216


>gi|321399323|emb|CAM67227.2| putative polyprenyl synthase [Leishmania infantum JPCM5]
          Length = 742

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 19/194 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   DN  +RRG   VH
Sbjct: 446 GGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++Y   TAI AG+      F    + + Q     ++  +  L  ++ L G   GQ LDI 
Sbjct: 504 VEYGVPTAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVLLAGH-AGQGLDIY 559

Query: 169 D---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                     E  D + +F     I   KTG  +   C    ++  A     E +  FG 
Sbjct: 560 RLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSEAVERFGL 619

Query: 216 NLGIIFQLADDLLD 229
            LG+ FQ+ DD L+
Sbjct: 620 ALGLAFQIVDDALN 633


>gi|206561780|ref|YP_002232545.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315]
 gi|198037822|emb|CAR53766.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315]
          Length = 331

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DET+   + + KT  L   +   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 164 DADVDETRYMQVIRYKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRVGTAFQIMDDWL 223

Query: 229 D 229
           D
Sbjct: 224 D 224


>gi|146084366|ref|XP_001464985.1| polyprenyl synthase [Leishmania infantum JPCM5]
          Length = 742

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 19/194 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   DN  +RRG   VH
Sbjct: 446 GGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++Y   TAI AG+      F    + + Q     ++  +  L  ++ L G   GQ LDI 
Sbjct: 504 VEYGVPTAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVLLAGH-AGQGLDIY 559

Query: 169 D---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                     E  D + +F     I   KTG  +   C    ++  A     E +  FG 
Sbjct: 560 RLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSEAVERFGL 619

Query: 216 NLGIIFQLADDLLD 229
            LG+ FQ+ DD L+
Sbjct: 620 ALGLAFQIVDDALN 633


>gi|83721521|ref|YP_441686.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
 gi|167618604|ref|ZP_02387235.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis Bt4]
 gi|257137855|ref|ZP_05586117.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
 gi|83655346|gb|ABC39409.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
          Length = 330

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPALLLLVAGALGEHTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 109 ALFGNAASVLVGDYLYSRSFEMMVG-----VGKMRVMEILSEATTIISEGEVL-QLLNMH 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 163 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 222

Query: 229 D 229
           D
Sbjct: 223 D 223


>gi|269794087|ref|YP_003313542.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
 gi|269096272|gb|ACZ20708.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
          Length = 337

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 17/204 (8%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H D L +     L+  GGK++R  L    A L        +     +E  H  +L HDD+
Sbjct: 36  HADELANTTSRHLVDAGGKRLRPLLALLTAELGESARPEVIDAAVVVELTHLATLYHDDV 95

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             MD+  +RRG P  H  +    AI+ G+ L   A   ++    +    +R Q       
Sbjct: 96  --MDSAPLRRGAPAAHEVWGNSVAILTGDLLFARASVTVAGLGPE---AVRWQAET---- 146

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               + +  GQ+ +      DE  V     +   KT +L+  +   GA  A       E 
Sbjct: 147 ---FERLCLGQLHETVGPRPDEDPVQHYLQVLSDKTASLIATSARFGARYAGCRPEIVEI 203

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  FGE +G+ FQLADD++D   D
Sbjct: 204 VANFGEKVGVAFQLADDVIDLTSD 227


>gi|85373560|ref|YP_457622.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis
           HTCC2594]
 gi|84786643|gb|ABC62825.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis
           HTCC2594]
          Length = 340

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 10/186 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L         ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 59  GGKRLRPMLTLAGAELVGYQGSRHHKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAAN 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +     ++ G+ L + AFE+++   +     +R   +LS    +  +G +    L  Q
Sbjct: 117 IIFGNPATVLVGDFLFSRAFELMTEDGS-----LRVLKILSNASAVIAEGEVA--QLSAQ 169

Query: 169 DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +    E +   I   KT AL   A    A++A    + +  L  +G NLG+ FQL DD 
Sbjct: 170 RKLETSEERYLDIIGAKTAALFAAASRISAVVAECDDSHERALDDYGRNLGVAFQLVDDA 229

Query: 228 LDCEED 233
           +D + D
Sbjct: 230 IDYDSD 235


>gi|312143242|ref|YP_003994688.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903893|gb|ADQ14334.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 330

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKK+R FL+   AS  + +    L +G++IE +H  SL+HDD+  +D+  +RRGK T  
Sbjct: 41  GGKKLRPFLMFLAASFGDYDKKELLDLGSSIEILHMASLLHDDI--IDDADLRRGKVTAQ 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++ +  A+  G+ L++  F+I       L + +  + ++ +  N+ L  +  G++   +
Sbjct: 99  KRFGKNEAVFIGDFLISRTFDI-------LFEYLDKETLIKMNKNLRL--ICEGEIEQAE 149

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            ++   I     +   + KT  L   +   GA ++     +   L   G  +G+ FQ+ D
Sbjct: 150 KKYDFNISIRDYYRRIRHKTALLFAISSYLGAYVSGIRGKKLNILYKLGLEIGMAFQIQD 209

Query: 226 DLLD 229
           D+LD
Sbjct: 210 DILD 213


>gi|15610519|ref|NP_217900.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Rv]
 gi|148663246|ref|YP_001284769.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
           H37Ra]
 gi|167966941|ref|ZP_02549218.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
           H37Ra]
 gi|2661662|emb|CAA15768.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE)
           (POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|148507398|gb|ABQ75207.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
           H37Ra]
          Length = 350

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+  
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRIL-- 148

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AL    C  GA++A+A       L  FG  LG+ FQ  DDL+
Sbjct: 201 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243


>gi|325067554|ref|ZP_08126227.1| Polyprenyl synthetase [Actinomyces oris K20]
          Length = 291

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 25/166 (15%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
           G A+E  H  +L HDD+  MD   +RRG P+    +    AI+ G+ L+  A +++++  
Sbjct: 2   GVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWGNSAAILTGDVLVARASQLMAALG 59

Query: 134 PKTQL---KDNIR---SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           P+  +   K   R    QL  +L    G          D  D +I   QV      KTG+
Sbjct: 60  PEAVMAHAKTFERLCMGQLHETLPRPAGT---------DPVDHYI---QVL---ADKTGS 104

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  +   GA++  A  + ++ +  FGE +G+ FQLADD++D   D
Sbjct: 105 LIAVSARYGAMLTGAGTHTEQIVEEFGERIGVAFQLADDVIDLMSD 150


>gi|10801560|dbj|BAB16693.1| GGPP synthase 1 [Nicotiana tabacum]
          Length = 127

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKPT H  Y E  A++AG+ LL +AFE I++    +  +     +  L  +IG +G+
Sbjct: 4   LRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIAAATAGVSPSRILAAIGELAKSIGTEGL 63

Query: 160 LGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + GQ+ DI    +  +    +  I   KT AL+  +   GAI+   +  E E+LR F   
Sbjct: 64  VAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTGEEVEKLRRFARC 123

Query: 217 LGII 220
           +G++
Sbjct: 124 IGLL 127


>gi|11465411|ref|NP_045198.1| prenyl transferase [Cyanidium caldarium]
 gi|14195057|sp|Q9TLS1|PREA_CYACA RecName: Full=Prenyl transferase
 gi|6466314|gb|AAF12896.1|AF022186_18 unknown [Cyanidium caldarium]
          Length = 323

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 36/238 (15%)

Query: 9   LQENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++ NSK + ++ +DLL   QT + +   +N  L +A ++ L+   KKIR  +V   A   
Sbjct: 1   MKVNSKTLQSVKEDLLNIEQTLNKLIKVNNPILSAAAKHLLIVESKKIRPAIVLLVAKAI 60

Query: 66  NVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           + N     +  R+    E IH  +L+HDD+  +D   IRRG  +V+  +    A+ AG+ 
Sbjct: 61  DKNKKIKTSQQRLAEVTEIIHTATLLHDDV--VDESIIRRGTKSVNKTFGNKIAVFAGDF 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQV 177
           L                   +S   L+  +N+ +   +   + D+     Q         
Sbjct: 119 LFA-----------------QSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTY 161

Query: 178 FMIQKM------KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + I K       KT +L+  +C+S  +++   Q+   +   +G+NLG+ FQ+ DD+LD
Sbjct: 162 YSIIKYLEKSFNKTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILD 219


>gi|289157786|gb|ADC84423.1| geranylgeranyl diphosphate synthase [Vibrio campbellii]
          Length = 287

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 26/233 (11%)

Query: 7   SKLQENSKRIDTILD--DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           S+ + + KRI T  D  + LL   S  Q  H         + + GG +IR  +  + +  
Sbjct: 5   SRSKASQKRI-TYQDCEEFLLSVVSGNQPAH--------YHLMTGGSRIRMRVCLDMSLC 55

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             +N   A+R+ +A+E +H  SLIHDD+   D   +RRG+  V +++    AI  G+ L+
Sbjct: 56  LGLNDEDAMRLASAVELLHNASLIHDDI--QDGDSLRRGQSAVWVKFGTNVAICTGDYLI 113

Query: 125 TYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMI 180
             AF I   ISSP      N+  QL+ +  + + +   + GQ  D+   E I       I
Sbjct: 114 ARAFGILANISSP------NVLPQLLEATQNAVSV--TVEGQNADLTAKEHISPQNYESI 165

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + K G L+  + E   I +    NE    R    +L I +Q+ DD+ D  ED
Sbjct: 166 AEKKAGPLLALSLELPLI-SSGRLNEIPTARHAASSLAIAYQILDDIKDSVED 217


>gi|322498420|emb|CBZ33493.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 742

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 19/194 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   DN  +RRG   VH
Sbjct: 446 GGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++Y   TAI AG+      F    + + Q     ++  +  L  ++ L G   GQ LDI 
Sbjct: 504 VEYGVPTAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVLLAGH-AGQGLDIY 559

Query: 169 D---------EFIDETQVF----MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                     E  D + +F     I   KTG  +   C    ++  A     E +  FG 
Sbjct: 560 RLDYLMPKVVESGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAPTVLSEAVERFGL 619

Query: 216 NLGIIFQLADDLLD 229
            LG+ FQ+ DD L+
Sbjct: 620 ALGLAFQIVDDALN 633


>gi|148977829|ref|ZP_01814384.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3]
 gi|145962898|gb|EDK28169.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3]
          Length = 323

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLALLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++++  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTTLGS-----LRILELMSEAVNVIAEGEVQ-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GAI+  +S   +  ++ +G+ LG  FQL DD++
Sbjct: 155 NPDTTEESYMQVIYSKTARLFEAATQIGAILTESSPEIETAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|45644728|gb|AAS73116.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine
           gamma proteobacterium EBAC20E09]
          Length = 314

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 98/180 (54%), Gaps = 10/180 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GKKIRS L    +S  +  +    ++ + IE +H  +L+HDD+  +DN   RRG  +V+ 
Sbjct: 40  GKKIRSRLNLIASS--SSKNSDRYKLASIIELLHTATLVHDDV--VDNASTRRGAISVNS 95

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +     ++ G+ + + AF ++       K +I ++L    T++I  QG L  Q+  I +
Sbjct: 96  LWSNAHGVLIGDYIYSKAFMLMVEIG---KTDILAELA-DATNDIS-QGELI-QLDAISN 149

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I   ++  I   KTG L   + ++GA++A A++N  + +    +N+GI+FQ+ DDLLD
Sbjct: 150 IKISLNKLKKISYFKTGRLFEASAKTGAMLAGANKNFIKNISESAKNIGILFQIKDDLLD 209


>gi|296123158|ref|YP_003630936.1| hypothetical protein Plim_2915 [Planctomyces limnophilus DSM 3776]
 gi|296015498|gb|ADG68737.1| protein of unknown function DUF116 [Planctomyces limnophilus DSM
           3776]
          Length = 634

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 27/203 (13%)

Query: 49  GGKKIRSFL-------VTECASLFNVNHLTAL-------RVGAAIECIHCYSLIHDDLPS 94
           GGK++R F+       +T  A L   +   AL       RV  AIE  H  SLIHDD+  
Sbjct: 304 GGKRLRPFITLAAYDALTGAAGLTADHQDQALEYPPAVNRVAMAIEAFHKASLIHDDI-- 361

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTH 152
            DN   R GK T+H QY    AI  G+ L+   + ++S+ + +L   + + ++   S  H
Sbjct: 362 QDNDQFRYGKETLHRQYGVGPAINLGDHLIGAGYRLVSASRKELGAEVAADILDAFSAAH 421

Query: 153 NIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
                 +  GQ  ++Q        +   +   I  +KT      A  +G  MA    +  
Sbjct: 422 ----MKLCEGQGAELQWSRSGRHDLTPAEAMKIYALKTSPAFEAALYAGIRMAGPVDDYA 477

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
           E +  F  +LG+ FQ+ +DL D 
Sbjct: 478 EMITQFSRHLGVAFQILNDLSDW 500


>gi|224419075|ref|ZP_03657081.1| polyprenyl synthetase ) [Helicobacter canadensis MIT 98-5491]
 gi|253828013|ref|ZP_04870898.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142585|ref|ZP_07804778.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511419|gb|EES90078.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131616|gb|EFR49233.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 306

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 12/156 (7%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A IE I   SL+HDD+  +DN   RR +P+++    +  AI+ G+ L + AF        
Sbjct: 56  AIIEMIQNASLLHDDV--IDNATTRRSQPSINAIAGDKNAIMLGDVLYSKAF-------C 106

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCFAC 193
           +L D   S  M+    +  +  +  G+M D++   +F  +E +   + + KT +L+    
Sbjct: 107 ELSDFQESFPMIPRIVSNAVTLLAIGEMEDVELAKQFNANEAKYLKMIEHKTASLIESTA 166

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + A +A  +Q E +  R +G NLGI FQ+ DD+LD
Sbjct: 167 YAAAFLAGRNQEEAKDFRVYGRNLGIAFQIIDDVLD 202


>gi|242011677|ref|XP_002426574.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus
           humanus corporis]
 gi|212510711|gb|EEB13836.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus
           humanus corporis]
          Length = 262

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V    E IH  SLIHDD+  +D    RRGKP+V++ ++     +AG+ +L  A  +I+  
Sbjct: 12  VAMIAEMIHSASLIHDDV--IDQSDFRRGKPSVNVLWNHKKVTMAGDFILAVASMMIA-- 67

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMIQKM--KTGALMCF 191
             +L+D+      ++LT +  +  ++ G+ + +   E  +E     + K   KT +L+  
Sbjct: 68  --RLRDD-----KVTLTLSQVVTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIAN 120

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + ++ A++A A ++  E    +G N+G+ FQL DDLLD
Sbjct: 121 SAKAVAMLAGADESLSEVAFQYGRNIGLAFQLVDDLLD 158


>gi|298373963|ref|ZP_06983921.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
 gi|298268331|gb|EFI09986.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
          Length = 324

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 13/195 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL SAI   L   GK +R  LV   A +        +     +E +H  +LIHDD+  +D
Sbjct: 32  RLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVTDNTINSAVLLELLHTATLIHDDV--ID 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG P+++  +D   +++ G+ +L+ A  +I S +T    ++R   ++ +  N+G 
Sbjct: 90  ETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GDLR---IVGIISNLGR 141

Query: 157 QGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
               G   Q+   ++  +DE     + K KT  L+    E GAI + AS       R FG
Sbjct: 142 DLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGAISSGASAEVIALCREFG 201

Query: 215 ENLGIIFQLADDLLD 229
           E LG  FQ+ DD+ D
Sbjct: 202 EYLGYCFQIKDDIFD 216


>gi|262383148|ref|ZP_06076285.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B]
 gi|301311752|ref|ZP_07217677.1| polyprenyl synthetase [Bacteroides sp. 20_3]
 gi|262296026|gb|EEY83957.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B]
 gi|300830312|gb|EFK60957.1| polyprenyl synthetase [Bacteroides sp. 20_3]
          Length = 324

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 13/195 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL SAI   L   GK +R  LV   A +        +     +E +H  +LIHDD+  +D
Sbjct: 32  RLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVTDNTINSAVLLELLHTATLIHDDV--ID 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG P+++  +D   +++ G+ +L+ A  +I S +T    ++R   ++ +  N+G 
Sbjct: 90  ETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GDLR---IVGIISNLGR 141

Query: 157 QGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
               G   Q+   ++  +DE     + K KT  L+    E GAI + AS       R FG
Sbjct: 142 DLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGAISSGASAEVIALCREFG 201

Query: 215 ENLGIIFQLADDLLD 229
           E LG  FQ+ DD+ D
Sbjct: 202 EYLGYCFQIKDDIFD 216


>gi|239944197|ref|ZP_04696134.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 15998]
          Length = 347

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 62  GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167
            +    AII G+ +L  A  +++           ++L   +        +  GQ  D   
Sbjct: 120 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIE------LCAGQQADCAF 173

Query: 168 QDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++   DE    +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 174 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 233

Query: 225 DDLL 228
           DDL+
Sbjct: 234 DDLI 237


>gi|312065737|ref|XP_003135935.1| polyprenyl synthetase [Loa loa]
 gi|307768907|gb|EFO28141.1| polyprenyl synthetase [Loa loa]
          Length = 370

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 16/161 (9%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++    E IH  SL+HDD+  +D   IRRG  TV+  +    A++ G+ +L  A +++ S
Sbjct: 116 KIAVISEMIHTASLVHDDV--IDKADIRRGSRTVNALWGNKMAVLVGDFILARATQVLCS 173

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVF---MIQKM-KTGAL 188
                   I    ++S+   I ++ ++ G+ + + D   ++ TQ F   M +   KT +L
Sbjct: 174 --------IGRPSVISVMATI-IEDLVKGEFMQMNDGTDLNATQRFNKYMAKTYSKTASL 224

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              +C+S A+++  S+ ++     +G++LGI FQ+ DDLLD
Sbjct: 225 FANSCKSAAMLSDVSEADELSAYEYGKSLGIAFQMIDDLLD 265


>gi|255013149|ref|ZP_05285275.1| polyprenyl synthetase [Bacteroides sp. 2_1_7]
          Length = 345

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 13/195 (6%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           RL SAI   L   GK +R  LV   A +        +     +E +H  +LIHDD+  +D
Sbjct: 53  RLQSAIDVILNSTGKHVRPLLVLLTAKVCGQVTDNTINSAVLLELLHTATLIHDDV--ID 110

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG P+++  +D   +++ G+ +L+ A  +I S +T    ++R   ++ +  N+G 
Sbjct: 111 ETKQRRGVPSLNAIFDNRISVLVGDYVLSTA--LIRSIQT---GDLR---IVGIISNLGR 162

Query: 157 QGMLG--GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
               G   Q+   ++  +DE     + K KT  L+    E GAI + AS       R FG
Sbjct: 163 DLSEGEIKQLETAEESILDENCYLQVIKKKTATLLSACTEIGAISSGASAEVIALCREFG 222

Query: 215 ENLGIIFQLADDLLD 229
           E LG  FQ+ DD+ D
Sbjct: 223 EYLGYCFQIKDDIFD 237


>gi|159465717|ref|XP_001691069.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii]
 gi|158279755|gb|EDP05515.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii]
          Length = 410

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG  +++      TAI+AG+ LL  A   ++S
Sbjct: 153 RLAEIAELIHVASLLHDDV--IDDAQTRRGVLSLNTSVGNKTAILAGDFLLARASVTLAS 210

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +      + SQ+   L H +  + M   QM    ++ +D          KT +LM  + 
Sbjct: 211 LRNSEIVELMSQV---LEHLVSGEIM---QMTATSEQLLDLEHYLAKTYCKTASLMANSS 264

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            S A++A A+    +    +G +LGI FQ+ DDLLD
Sbjct: 265 RSVAVLAGAAPEVCDMAWSYGRHLGIAFQVVDDLLD 300


>gi|281491887|ref|YP_003353867.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis KF147]
 gi|281375598|gb|ADA65104.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis KF147]
          Length = 319

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R   +   +    ++    L + A++E +H  +L+HDD+  +D+   RRG  T+ 
Sbjct: 47  GGKMLRPAYLLLFSGFTVLSENERLALAASVEMMHIATLVHDDV--IDHADTRRGVATLS 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            +Y    A+ AG+ L    F ++S    +L +         LT NIG ++ +LGG++  +
Sbjct: 105 AKYGPEIAVYAGDYLFIAVFRLMSEHSLELSN---------LTKNIGSIERLLGGELGQL 155

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              F + +T    I+ +  KTG L   +     +++  +   K R    G N+GI FQ+ 
Sbjct: 156 NHHFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNTLTK-RAYKIGMNIGISFQIM 214

Query: 225 DDLLD 229
           DD LD
Sbjct: 215 DDYLD 219


>gi|222152303|ref|YP_002561478.1| polyprenyl synthetase [Streptococcus uberis 0140J]
 gi|222113114|emb|CAR40511.1| polyprenyl synthetase [Streptococcus uberis 0140J]
          Length = 326

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 32/219 (14%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCY 85
           + +Q ++ +   + I+ +  GGK +R    FL +              ++ A++E +H  
Sbjct: 24  NRVQVRNTEIEKAIIQLSQAGGKYLRPAFFFLFSSFGPYQKERKEQLQKIAASLEILHMA 83

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           +L+HDD+  +D+  +RRG PT+  QY +  A+  G+ L T  FE+I              
Sbjct: 84  TLVHDDV--IDDSPLRRGNPTIQTQYGKDVAVYTGDFLFTVFFELI-------------- 127

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-----------KTGALMCFACE 194
             L    N     +    M  I    +D+  ++  QK            KT  L   A +
Sbjct: 128 --LESMSNTPYMAINAKSMKKILVGELDQMHLYFNQKQSIRDYLRAISGKTAELFKLASQ 185

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            GA  + A +         G ++G+ FQ+ DD+LD   D
Sbjct: 186 EGAYFSGADETVVRLAGRIGYHIGMTFQILDDILDYTAD 224


>gi|150026116|ref|YP_001296942.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772657|emb|CAL44140.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
          Length = 325

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 18/202 (8%)

Query: 39  LLSAIRYALLG--GKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPS 94
           LL+ I Y ++   GK++R   V   A + +   +     R    IE IH  +L+HDD+  
Sbjct: 32  LLNRITYYVVNRKGKQMRPMFVFLTAKMISGGTVLERTYRGALVIELIHTATLVHDDV-- 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D+   RRG  +++  +    A++ G+ LL+    ++S       DN    L+  ++  +
Sbjct: 90  VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLKIIS--V 140

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            ++ M  G++L I+      I E   + I + KT  L+   C  GA      + + E++R
Sbjct: 141 AVREMSEGELLQIEKARRLDITEAIYYEIIRQKTATLIAACCALGAQSVSNDEVQVEKMR 200

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FGE +G+ FQ+ DDL D  ED
Sbjct: 201 KFGELIGMAFQIKDDLFDYTED 222


>gi|327402252|ref|YP_004343090.1| trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823]
 gi|327317760|gb|AEA42252.1| Trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823]
          Length = 322

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 19/212 (8%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRS-FLVTECASLFNVNHLTALRVGAAIE 80
           L +   H   +    LL  I + ++   GK++R  FL      L  VN  T  +  + +E
Sbjct: 16  LFEVRFHESMKSKVPLLDKITHYIIRRKGKQMRPMFLFLTAKMLGEVNEKT-YQSASLVE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +L+HDD+  +D+   RRG  +V+  +    A++ G+ +L+    ++ S +    D
Sbjct: 75  LLHTATLVHDDV--VDDANERRGFFSVNALWKNKIAVLVGDYMLSRV--LLHSLEN---D 127

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA 197
           NIR+  +++      ++ M  G++L I+      I E   F + + KT +L+   CES A
Sbjct: 128 NIRALQIVAR----AVREMSEGELLQIEKARKLDITEEVYFDVIRQKTASLIATVCESAA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                 ++  +R+R FGE +G+ FQ+ DD+ D
Sbjct: 184 ASVD-REDMADRMRNFGELVGLAFQVKDDIFD 214


>gi|291447668|ref|ZP_06587058.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291350615|gb|EFE77519.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 381

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 96  GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 153

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167
            +    AII G+ +L  A  +++           ++L   +        +  GQ  D   
Sbjct: 154 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIE------LCAGQQADCAF 207

Query: 168 QDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++   DE    +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 208 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 267

Query: 225 DDLL 228
           DDL+
Sbjct: 268 DDLI 271


>gi|257871156|ref|ZP_05650809.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2]
 gi|257805320|gb|EEV34142.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2]
          Length = 328

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 9/162 (5%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+ + AAIE +H  SLIHDD+  +D    RR  PT+  Q+    A+ AG+ L    F+++
Sbjct: 70  AVALSAAIEMLHTASLIHDDI--VDQADTRRSLPTIRAQFGNDVAVYAGDYLFVCCFKLL 127

Query: 132 SSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +     LK   I S+ M ++     L G LG QM    D  +           KT  L  
Sbjct: 128 ADYAGSLKSLQINSRSMETI-----LAGELG-QMSKRYDLNVTIEDYLENISGKTAELFA 181

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +C  GA  + AS     + +  G+++G+ FQ+ DD+LD  +
Sbjct: 182 LSCFIGAYESGASLRLANQAKTIGQSIGLAFQIMDDILDYSQ 223


>gi|307325382|ref|ZP_07604584.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306888851|gb|EFN19835.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 365

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 72  GGKAVRPALALLSAEAAGAAPGAGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T   D  R+   L+       + ++ GQ  DI 
Sbjct: 130 KVHGPAQAILVGDALFALANEILLELGT--ADAGRATRRLT----AATRKLIDGQAQDIS 183

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +   V     ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  D
Sbjct: 184 YEHRERVTVEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVD 243

Query: 226 DLL 228
           DLL
Sbjct: 244 DLL 246


>gi|42522155|ref|NP_967535.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100]
 gi|39574686|emb|CAE78528.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100]
          Length = 318

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 17/188 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK  R+ L+   ++   +   T L +   IE IH  SL+HDDL  +D  ++RRGK    
Sbjct: 33  GGKGFRAKLIRMMSAHLGIEPKTELLLSQTIEFIHNASLLHDDL--IDRSHLRRGKTAAW 90

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-- 166
           ++Y    A++AG+ LL      +S        NI+   ++  T  + +  +L G+ L   
Sbjct: 91  LKYTPEYAVLAGDYLLARVMVNLSG-----HGNIK---LVQYTAEV-ISDLLEGEWLQDS 141

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER--LRCFGENLGIIFQL 223
            + D F+   Q+  I  +KT +L  + C     +A    +E+    L   G  LG +FQ 
Sbjct: 142 VVGDFFVTMEQLDRIHNLKTASLFKW-CIRAPFIAQERYDEELHNILSEMGTLLGQLFQR 200

Query: 224 ADDLLDCE 231
           +DDLLD +
Sbjct: 201 SDDLLDYD 208


>gi|308232443|ref|ZP_07664084.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001]
 gi|308379494|ref|ZP_07486502.2| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu010]
 gi|308380676|ref|ZP_07669246.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu011]
 gi|308406139|ref|ZP_07669521.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012]
 gi|308213955|gb|EFO73354.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001]
 gi|308356823|gb|EFP45674.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu010]
 gi|308360773|gb|EFP49624.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu011]
 gi|308364378|gb|EFP53229.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012]
          Length = 354

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 41  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+  
Sbjct: 97  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRIL-- 152

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 153 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 204

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AL    C  GA++A+A       L  FG  LG+ FQ  DDL+
Sbjct: 205 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 247


>gi|149634722|ref|XP_001506831.1| PREDICTED: similar to PDSS1 protein [Ornithorhynchus anatinus]
          Length = 398

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 24/200 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   NV+H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 116 GKAFRPIIVVLMARACNVHHDNSRDVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 173

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + L+ ++ G
Sbjct: 174 GKHTVNQIWGEKKAVLAGDFILSAASVALA--------RIGNTTIVSVLTQV-LEDLVRG 224

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +I+        E    +G+N+GI
Sbjct: 225 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPVVHEIAYQYGKNVGI 284

Query: 220 IFQLADDLLD---CEEDLPK 236
            FQL DD+LD   C + L K
Sbjct: 285 AFQLIDDVLDFTACTDQLGK 304


>gi|269128599|ref|YP_003301969.1| trans-hexaprenyltranstransferase [Thermomonospora curvata DSM
           43183]
 gi|268313557|gb|ACY99931.1| Trans-hexaprenyltranstransferase [Thermomonospora curvata DSM
           43183]
          Length = 331

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 28/240 (11%)

Query: 1   MNGGLP------SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKK 52
           M+ G+P      + L  + +    ++++LL+Q+ +      +D LL+     L+  GGK+
Sbjct: 1   MSSGVPFDLSVDAALAADMRERLAVVEELLVQSVTS-----DDPLLAEASKHLVEAGGKR 55

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
            R  LV   +   +      +     +E  H  +L HDD+  MD   +RRG+ + ++++ 
Sbjct: 56  FRPALVLLASHFGDPAAAGVVPAAVVVELTHLATLYHDDV--MDEATVRRGEESANVRWT 113

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              AI+ G+ L   A ++++    Q    +R Q             ++ GQ+ +      
Sbjct: 114 NTVAILTGDYLFARASDLLADLGPQ---AVRIQAR-------AFARLVRGQIAETSGPAP 163

Query: 173 DETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           D   +     +   KT +L+  +   GA++A A Q   E +    E +G+ FQL+DD+LD
Sbjct: 164 DADPLEHYLQVVADKTASLIAVSGHLGALLAGAPQQVVETITSACEKIGVAFQLSDDILD 223


>gi|86147820|ref|ZP_01066126.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222]
 gi|85834347|gb|EAQ52499.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222]
          Length = 323

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 12/224 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69
           K I T+  + + +    +Q Q N    L++ + + ++  GGK++R  L    A       
Sbjct: 4   KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +   A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+
Sbjct: 64  EAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQ 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++++  +     +R   ++S + N+  +G +  Q+++  +    E     +   KT  L 
Sbjct: 122 MMTTLGS-----LRILELMSESVNVIAEGEVQ-QLMNCNNPDTTEESYMQVIYSKTARLF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + GAI+  ++   +  ++ +G+ LG  FQL DD++D   D
Sbjct: 176 EAATQIGAILTESTPEIETAMQNYGKYLGTAFQLIDDVMDYTAD 219


>gi|116074594|ref|ZP_01471855.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. RS9916]
 gi|116067816|gb|EAU73569.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. RS9916]
          Length = 323

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGKKIR  +V   + +L     LTA   R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKKIRPGIVLLVSRALSPEGELTARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVA 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTG 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + +++++        KT +L+  +  +  +++  + +  + L  FG  LG+ FQ+ D
Sbjct: 162 QSFETYLEKSYC------KTASLIANSARAAGVLSEQTPDRLDSLYRFGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|239990653|ref|ZP_04711317.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 11379]
          Length = 349

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 64  GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 121

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167
            +    AII G+ +L  A  +++           ++L   +        +  GQ  D   
Sbjct: 122 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARLSTCVIE------LCAGQQADCAF 175

Query: 168 QDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++   DE    +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 176 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 235

Query: 225 DDLL 228
           DDL+
Sbjct: 236 DDLI 239


>gi|198284597|ref|YP_002220918.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665678|ref|YP_002427267.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198249118|gb|ACH84711.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517891|gb|ACK78477.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 322

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A +        + + A +E IH  +L+HDD+  +D   +RR   T +
Sbjct: 43  GGKRLRPIVLLLAARMGGERGPRPISLAAVVEFIHTATLLHDDV--VDGSELRRSNATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            ++    A++ G+ L   +FE++      ++D ++R    ++   ++  QG +  Q+ + 
Sbjct: 101 QRWGNAAAVLVGDFLYARSFEMM------VQDGDMRILATMAEATSVIAQGEVA-QLENA 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +     F + + KT  L   A   GA++       ++ L  +G  LGI FQL DD 
Sbjct: 154 NDPDLSPEAYFAVIEAKTAKLFEAAARIGALVNELDAAAEKALAQYGSLLGIAFQLMDDA 213

Query: 228 LD 229
           LD
Sbjct: 214 LD 215


>gi|167580495|ref|ZP_02373369.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis TXDOH]
          Length = 297

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A     +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPALLLLVAGALGEHTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 88  ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD L
Sbjct: 142 DADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|320593030|gb|EFX05439.1| hexaprenyl pyrophosphate synthetase [Grosmannia clavigera kw1407]
          Length = 556

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 89/166 (53%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 298 RLAEITELIHTASLLHDDV--IDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALA- 354

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK--M 183
              +L++    +L+ ++  N     ++ G+ + +++   DET          + +QK  +
Sbjct: 355 ---RLRNAEVVELLSTVIAN-----LVEGEFMQLKNTARDETNPVWSEATLQYYLQKTYL 406

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++  A     +    +G+NLG+ FQL DD+LD
Sbjct: 407 KTASLISKSCRAAALLGGADAQTVDAAYAYGKNLGLAFQLVDDMLD 452


>gi|227509263|ref|ZP_03939312.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227191261|gb|EEI71328.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 325

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 18/191 (9%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R    ++ +E       + L A    AAIE +H  +LIHDD+  +D   +RRG  
Sbjct: 45  GGKLLRPGFFYIYSEFGEKIPADKLRA--GAAAIELLHVATLIHDDV--IDQSPLRRGVQ 100

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+H QY +  AI AG+ L T  F+ +        D  R        H   +Q +L G++ 
Sbjct: 101 TIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDATDLQR--------HIEAMQTILNGELD 152

Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            +   +   + +   F     KT  L   + E  AI+ HA +N        G  +G  +Q
Sbjct: 153 QMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTHAPRNIVTLGGEIGLAIGQAYQ 212

Query: 223 LADDLLDCEED 233
           + DD+LD   D
Sbjct: 213 IQDDILDYGGD 223


>gi|326921623|ref|XP_003207056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
           [Meleagris gallopavo]
          Length = 336

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 54  GKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRR 111

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 112 GKMTVNQIWGERKAVLAGDFILSAASLALA--------RIGNTTIISVLTQV-IEDLVRG 162

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +I++       E    +G+N+GI
Sbjct: 163 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILSCPDPKVHEIAYQYGKNIGI 222

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 223 AFQLIDDVLD 232


>gi|184200190|ref|YP_001854397.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila
           DC2201]
 gi|183580420|dbj|BAG28891.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila
           DC2201]
          Length = 339

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 17/202 (8%)

Query: 33  TQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
            + +D+L     + LL  GGK++R  L    A +    +   +     +E  H  SL HD
Sbjct: 35  VRSSDQLADVTAHHLLAAGGKRVRPLLALLAAEVAGSVNEDVIEAAVVVELTHLASLYHD 94

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MD+  +RRG  T H  +    AI+ G+ +   A  ++S+   +        LM+  
Sbjct: 95  DV--MDSAPMRRGVETAHTVWGNTVAILTGDMIFARASAMVSALGQE-------SLMIQA 145

Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEK 207
           +     + ++ GQ+ +     E  D  + ++ +   KTG+L+  + + GA++  A ++  
Sbjct: 146 ST---FERLVIGQLRETTGPAEGQDPLEHYLEVIAGKTGSLIAASGQYGALLGGAPRSVV 202

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           + +  +GE +G+ FQLADD++D
Sbjct: 203 DLMVVYGEKVGLAFQLADDIID 224


>gi|170782926|ref|YP_001711260.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169157496|emb|CAQ02687.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 340

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 31/204 (15%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  +V      L   +   A  VGAA E +H   ++HDD+  +D  + RRG P V
Sbjct: 36  GGKRFRPRMVMAAYDGLGGQDVQAAAHVGAAFEMLHTALIVHDDV--IDRDFTRRGGPNV 93

Query: 108 HIQYDEV-----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
              Y ++                  A+IAG+  L  A+ +I +  + ++D  RS LM  L
Sbjct: 94  SGAYRDIATTQGLPQPLAEHRGMSAAVIAGDLALVNAYRLIDA--SGVRDLTRSHLMEIL 151

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFAC--ESGAIMAHASQ 204
              +       G+++D++     +     ++  ++++KT A+  F    ++GA++A A  
Sbjct: 152 DDAVFASA--AGELIDVEFSLTADVPSVDEILRMERLKT-AVYSFEAPLQAGAVLAGARP 208

Query: 205 NEKERLRCFGENLGIIFQLADDLL 228
                L  F  ++GI +Q+ DD+L
Sbjct: 209 EVVAALGDFDRDIGIAYQVVDDVL 232


>gi|18447424|gb|AAL68276.1| RE18374p [Drosophila melanogaster]
          Length = 245

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 12/150 (8%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++     
Sbjct: 2   VHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTI 59

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIM 199
           + SQ++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A++
Sbjct: 60  VLSQILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATAVI 111

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 112 AQADDNVAEVAFQYGRNIGLAFQLVDDMLD 141


>gi|32473980|ref|NP_866974.1| polyprenyl synthetase [Rhodopirellula baltica SH 1]
 gi|32444517|emb|CAD74516.1| polyprenyl synthetase [Rhodopirellula baltica SH 1]
          Length = 659

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 27/246 (10%)

Query: 2   NGGLPSKLQENSKRID------TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIR 54
           NG  P+   E  + ID      TI  D L +   H +       ++   Y A++GG    
Sbjct: 297 NGARPAVTPEQLEGIDPIAATETIALDFLARGGKHSRP-----FITLAAYDAMMGGDGTG 351

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           +    +   + N       R   +IE  H  SL+HDD+   D    R G+P VH ++   
Sbjct: 352 A----DGEDVLNRVPDAVRRAALSIETFHKASLVHDDI--EDGDAFRYGQPAVHQRFGTA 405

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNI----RSQLMLSLTH-NIGLQGMLGGQML--DI 167
           TAI  G+ L+   + ++S  +  + D++    R  L+ SL   ++ L    G ++L  D 
Sbjct: 406 TAINVGDYLIGLGYRLLS--RNMMGDDVDAGTRVDLLDSLAAAHVRLSEGQGAELLWRDA 463

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D  +       I  +KT      A  SG  MA  +    + +R F  NLG+ FQ+ +DL
Sbjct: 464 KDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDASALIDPIRKFSRNLGVAFQIINDL 523

Query: 228 LDCEED 233
            D   D
Sbjct: 524 NDWAGD 529


>gi|227876918|ref|ZP_03995014.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01]
 gi|256843741|ref|ZP_05549229.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256850189|ref|ZP_05555619.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047813|ref|ZP_06020763.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293379832|ref|ZP_06625954.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
 gi|312978109|ref|ZP_07789854.1| polyprenyl synthetase family protein [Lactobacillus crispatus
           CTV-05]
 gi|227863475|gb|EEJ70898.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01]
 gi|256615161|gb|EEU20362.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713161|gb|EEU28152.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260571870|gb|EEX28441.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290923604|gb|EFE00485.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
 gi|310895084|gb|EFQ44153.1| polyprenyl synthetase family protein [Lactobacillus crispatus
           CTV-05]
          Length = 329

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 16/205 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSL 87
           ++T ++D   + +  A  GGK +R  L+   A + +     +   +++ ++IE +H  SL
Sbjct: 28  IRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQIIQLASSIEILHMASL 87

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+    +   RRGK ++  ++ + TA+ AG+ L T+ F++I +  ++    I++   
Sbjct: 88  IHDDIIDDSDE--RRGKISIQARFGKDTAVYAGDLLFTHFFDLILNAISEQDYMIKNAHT 145

Query: 148 LSLTHNIGLQGMLG--GQMLDIQDEFIDE-TQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +   H++ L G LG   +  ++  +F D  T V    K KT AL   A E G+   +  +
Sbjct: 146 M---HHL-LAGELGQMAERFNLSQDFNDYLTNV----KGKTAALFRLAAEEGSHFGNGDE 197

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
              + L  FGENLGI FQ+ DD+LD
Sbjct: 198 QTTQALASFGENLGIAFQIVDDILD 222


>gi|302674533|ref|XP_003026951.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8]
 gi|300100636|gb|EFI92048.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8]
          Length = 443

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T +R+   +E IH  SL+HDD+  +D   +RRG  +    +    A++ GN +L  A   
Sbjct: 188 TQMRLAHVLEMIHAASLLHDDV--IDASPLRRGVASAPEAFGNNLAVLGGNFVLGRA--- 242

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGAL 188
            S+   +L D     L+ S+  N     ++ G++L ++ +   +     +QK  MKT +L
Sbjct: 243 -SAALARLGDLEVVGLIASIISN-----LVEGEILQLKSQNPSDAWNLYLQKTYMKTASL 296

Query: 189 MCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231
           M     +   +    + E  +E    +G NLGI FQL DD+LD E
Sbjct: 297 MAKGARAAVALGGCKEGEVWREVAYAYGRNLGIAFQLQDDILDYE 341


>gi|91077592|ref|XP_973319.1| PREDICTED: similar to AGAP000591-PA [Tribolium castaneum]
          Length = 446

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 21/209 (10%)

Query: 32  QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-------HLTALRVGAAI-ECI 82
           ++ + D L     Y   G GK IR  +    A   N +        LT+ R  A I E I
Sbjct: 144 RSTYQDDLYEIATYYFDGHGKAIRPMVAILMARAINYHIYKEKSGLLTSQREVAMISEMI 203

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+HDD+  +D    RRGKP+V++ ++     +AG+ +L  A  +I+  K      +
Sbjct: 204 HTASLVHDDV--IDQSDFRRGKPSVNVMWNHKKVTMAGDFILAVASIMIARLKNNDVTLV 261

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMA 200
            SQ++  L     +Q  LG +      E  +E     + K   KT +L+  + +S  ++A
Sbjct: 262 LSQVVSDLVQGEFMQ--LGSK------ETENERFAHYLTKTYRKTASLIANSVKSVTMLA 313

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLD 229
            A +   +    +G NLG+ FQL DDLLD
Sbjct: 314 GADEQLSDISYQYGRNLGLAFQLVDDLLD 342


>gi|86607946|ref|YP_476708.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556488|gb|ABD01445.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 320

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 25/225 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++N  R+ +    +L   A H        L SA      GGK IR  +V   A     
Sbjct: 14  RLRQNLTRLVSAKHPILAMAAEH--------LFSA------GGKGIRPAIVLLIARATTP 59

Query: 68  N-HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +  +T    R+    E IH  SL+HDD+  +D   +RRG  TV+  +D   A++AG+ L 
Sbjct: 60  DGEITPRHWRLAEITEMIHTASLVHDDV--IDAADVRRGIDTVNTLFDNRIAVLAGDYLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A   +++      DN+    +LS       +G +  Q L   D  +           K
Sbjct: 118 GQAAWYLAN-----LDNLEVVKLLSKVIMDLPEGEVR-QSLTRFDPDVSMEDYLAKSFYK 171

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T +LM  + ++  +++  S+   +RL  FG +LGI FQ+ DDLLD
Sbjct: 172 TASLMSGSSKAAGLLSGVSEEVADRLFDFGRDLGIAFQIVDDLLD 216


>gi|1749738|dbj|BAA13926.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 356

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 10/161 (6%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+    E IH  SL+HDD+  +D+  +RRG P+ ++ +    +I+AGN +L  A  +++
Sbjct: 120 LRLAQITEMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARASTVMA 177

Query: 133 SPKTQLKDNIRSQLMLSLTHN--IGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGAL 188
             +      + + ++  L     + L+  +    L+I+    D    + I+K  +KT +L
Sbjct: 178 RLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFD----YYIEKSFLKTASL 233

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  +C++  I+   S         +G  +G  FQL DD+LD
Sbjct: 234 ISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLD 274


>gi|119356815|ref|YP_911459.1| trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM
           266]
 gi|119354164|gb|ABL65035.1| Trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM
           266]
          Length = 324

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 15/197 (7%)

Query: 44  RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L   GK+IR  LV   A +    + +  R    +E +H  +LIHDD+  +D   +RR
Sbjct: 37  RYVLKQQGKQIRPALVLLSAKMCGGVNDSTYRSAIMVELLHSATLIHDDV--VDGAEMRR 94

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  +++  +    +++ G+ LL+         K     +I S+          ++ M  G
Sbjct: 95  GLASINALWKNKISVLIGDYLLSKGLLYSLENKDYFSLHIVSE---------AVRRMSEG 145

Query: 163 QMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           ++L IQ      I E     +   KT +L+  +C  GA  A   +    +++ +GE LG+
Sbjct: 146 EILQIQKTRSLDISEEDYLSVISDKTASLIASSCAMGAASATEDEAAIAKMKNYGEYLGL 205

Query: 220 IFQLADDLLDCEEDLPK 236
            FQ+ DDLLD   D  K
Sbjct: 206 AFQIRDDLLDYTGDSNK 222


>gi|295693497|ref|YP_003602107.1| polyprenyl synthetase [Lactobacillus crispatus ST1]
 gi|295031603|emb|CBL51082.1| Polyprenyl synthetase [Lactobacillus crispatus ST1]
          Length = 329

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 16/205 (7%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSL 87
           ++T ++D   + +  A  GGK +R  L+   A + +     +   +++ ++IE +H  SL
Sbjct: 28  IRTPYSDLQDALLEMASNGGKYLRPSLLILSAQIASKKETVSKQIIQLASSIEILHMASL 87

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+    +   RRGK ++  ++ + TA+ AG+ L T+ F++I +  ++    I++   
Sbjct: 88  IHDDIIDDSDE--RRGKISIQARFGKDTAVYAGDLLFTHFFDLILNAISEQDYMIKNAHT 145

Query: 148 LSLTHNIGLQGMLG--GQMLDIQDEFIDE-TQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +   H++ L G LG   +  ++  +F D  T V    K KT AL   A E G+   +  +
Sbjct: 146 M---HHL-LAGELGQMAERFNLSQDFNDYLTNV----KGKTAALFRLAAEEGSHFGNGDE 197

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
              + L  FGENLGI FQ+ DD+LD
Sbjct: 198 QTTQALASFGENLGIAFQIVDDILD 222


>gi|325567804|ref|ZP_08144387.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
           12755]
 gi|325158495|gb|EGC70643.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
           12755]
          Length = 339

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 8/186 (4%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R ++ +   A   + +   A+ + A+IE +H  SLIHDD+  +D+   RR  PT+
Sbjct: 57  GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEMLHTASLIHDDI--VDHADTRRKLPTI 114

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+ AG+ L    F++++   + +K    S  M S +    L G LG QM   
Sbjct: 115 RSEFGNDVAVYAGDYLFVCCFKLMADYASSMK----SLQMNSRSMEKILAGELG-QMSKR 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +         + KT  L   +C  GA  +  S     + R  GE +G+ FQ+ DD+
Sbjct: 170 YDLSVTVEDYLENIRGKTAELFALSCFIGAYESGTSLRFANQAREIGEAIGLAFQIMDDV 229

Query: 228 LDCEED 233
           LD  +D
Sbjct: 230 LDYSQD 235


>gi|257868135|ref|ZP_05647788.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30]
 gi|257874590|ref|ZP_05654243.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10]
 gi|257802249|gb|EEV31121.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30]
 gi|257808754|gb|EEV37576.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10]
          Length = 323

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 8/186 (4%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R ++ +   A   + +   A+ + A+IE +H  SLIHDD+  +D+   RR  PT+
Sbjct: 41  GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEMLHTASLIHDDI--VDHADTRRKLPTI 98

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+ AG+ L    F++++   + +K    S  M S +    L G LG QM   
Sbjct: 99  RSEFGNDVAVYAGDYLFVCCFKLMADYASSMK----SLQMNSRSMEKILAGELG-QMSKR 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +         + KT  L   +C  GA  +  S     + R  GE +G+ FQ+ DD+
Sbjct: 154 YDLSVTVEDYLENIRGKTAELFALSCFIGAYESGTSLRFANQAREIGEAIGLAFQIMDDV 213

Query: 228 LDCEED 233
           LD  +D
Sbjct: 214 LDYSQD 219


>gi|78212668|ref|YP_381447.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9605]
 gi|78197127|gb|ABB34892.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9605]
          Length = 323

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   + +L     L+    R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLLSRALSEQGELSPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH ++D   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYRFDTA 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + +++++        KT +L+  +C +  +++  +  + + L  FG  LG+ FQ+ D
Sbjct: 162 QTFETYLEKSYC------KTASLIANSCRAAGVLSGCAPTQLDSLYQFGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|255020838|ref|ZP_05292894.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969629|gb|EET27135.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC
           51756]
          Length = 322

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 10/206 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q Q     + A+   L+  GGK++R  ++   A +        + + A +E IH  +L
Sbjct: 22  HEQIQSGVPTIPAMGAYLINAGGKRLRPIILLLAARMGGERGPRPIPLAAVVEFIHSATL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RR   T +  +    A++ G+ L   +FE++         ++R    
Sbjct: 82  LHDDV--VDGSELRRNHATANQLWGNAAAVLVGDFLYARSFEMMVE-----DGDMRIMAT 134

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           ++   ++  QG +  Q+ +  D  +D    F +   KT  L   A   GAI+      ++
Sbjct: 135 MAEATSVISQGEVA-QLENADDPDLDAEAYFAVIAAKTAKLFEAAARIGAIVNAMEPEQE 193

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             L  +G  +G+ FQL DD LD + +
Sbjct: 194 LALARYGSLVGVAFQLMDDALDYQAE 219


>gi|12231184|dbj|BAB20976.1| putative GGPP synthase [Sonchus oleraceus]
          Length = 126

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIG 155
           N   RRGKPT HI Y E  A++AG+ LL+++FE I+   T+   + R  + +  L   IG
Sbjct: 1   NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIAYMATKGVSSDRILRAIGELAKCIG 60

Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +G++ GQ++DI  E  D     +  I   KT AL+  +   GAIM   S  E E+L+  
Sbjct: 61  SEGLVAGQVVDICSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLQNL 120

Query: 214 GENLGI 219
            + LG 
Sbjct: 121 RDRLGF 126


>gi|254414461|ref|ZP_05028227.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC
           7420]
 gi|196178691|gb|EDX73689.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC
           7420]
          Length = 323

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 17/187 (9%)

Query: 49  GGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R  +V      T   S     H    R+    E IH  SL+HDD+  +D   +RR
Sbjct: 44  GGKRVRPAIVLLIARATVLDSDITPRHR---RLAEITEMIHTASLVHDDV--VDESSVRR 98

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
             PTV+  ++   A++AG+ L   +   +++        + SQ++  +      QG+   
Sbjct: 99  NVPTVNSMFNNRVAVLAGDFLFGQSAWYLANLNNLEVVKLLSQVIKDMAEGEIQQGLTRF 158

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +     D ++++T        KT +L+  + +S  +++  S    E L  +G +LG+ FQ
Sbjct: 159 EASTTIDTYLEKTY------KKTASLIANSSKSAGLLSGVSAEVAENLYRYGNHLGLAFQ 212

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 213 IVDDILD 219


>gi|31794563|ref|NP_857056.1| polyprenyl synthetase IdsB [Mycobacterium bovis AF2122/97]
 gi|121639307|ref|YP_979531.1| putative polyprenyl synthetase idsB [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148824590|ref|YP_001289344.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11]
 gi|215405406|ref|ZP_03417587.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 02_1987]
 gi|215428885|ref|ZP_03426804.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
 gi|215432351|ref|ZP_03430270.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
 gi|219559456|ref|ZP_03538532.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
 gi|224991804|ref|YP_002646493.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800429|ref|YP_003033430.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435]
 gi|254365996|ref|ZP_04982041.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str.
           Haarlem]
 gi|260188437|ref|ZP_05765911.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
 gi|260202541|ref|ZP_05770032.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
 gi|260206746|ref|ZP_05774237.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
 gi|289444961|ref|ZP_06434705.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
 gi|289449079|ref|ZP_06438823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
 gi|289555659|ref|ZP_06444869.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605]
 gi|289571618|ref|ZP_06451845.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
 gi|289576114|ref|ZP_06456341.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
 gi|289747205|ref|ZP_06506583.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987]
 gi|289752097|ref|ZP_06511475.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
 gi|289755512|ref|ZP_06514890.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
 gi|297636043|ref|ZP_06953823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207]
 gi|297733042|ref|ZP_06962160.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN R506]
 gi|306805203|ref|ZP_07441871.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008]
 gi|306969495|ref|ZP_07482156.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009]
 gi|313660374|ref|ZP_07817254.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN V2475]
 gi|31620159|emb|CAD95588.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE)
           (POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium bovis
           AF2122/97]
 gi|121494955|emb|CAL73441.1| Possible polyprenyl synthetase idsB [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134151509|gb|EBA43554.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148723117|gb|ABR07742.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11]
 gi|224774919|dbj|BAH27725.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321932|gb|ACT26535.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435]
 gi|289417880|gb|EFD15120.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
 gi|289422037|gb|EFD19238.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
 gi|289440291|gb|EFD22784.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605]
 gi|289540545|gb|EFD45123.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
 gi|289545372|gb|EFD49020.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
 gi|289687733|gb|EFD55221.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987]
 gi|289692684|gb|EFD60113.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
 gi|289696099|gb|EFD63528.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
 gi|308348256|gb|EFP37107.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008]
 gi|308352981|gb|EFP41832.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009]
 gi|328460161|gb|AEB05584.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207]
          Length = 350

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+  
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 148

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AL    C  GA++A+A       L  FG  LG+ FQ  DDL+
Sbjct: 201 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243


>gi|296119175|ref|ZP_06837745.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967801|gb|EFG81056.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM
           20306]
          Length = 366

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 15/184 (8%)

Query: 49  GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+ R   S L +E  S      +  ++    +E +H  +L HDD+  MD    RRG  
Sbjct: 87  GGKRFRPIMSLLSSEFGSEPGSEKV--IKAATVVEMVHVATLYHDDV--MDEADRRRGVE 142

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + + +++   AI+AG+ LL +A  ++S   T   +   +     +T    ++  +G    
Sbjct: 143 SANSRWNNSVAILAGDALLAHASRLMSQLDTHTVEQFAATFEELVTGQ--MRETVGAGEA 200

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D ++      +IQ+ KT  L+  A   GA  + A +   E LR  G  +G++FQ+ D
Sbjct: 201 NPIDHYMK-----VIQE-KTAVLIASAGYFGAYHSGAPKEHAEALRTIGGAIGMVFQIVD 254

Query: 226 DLLD 229
           D++D
Sbjct: 255 DIID 258


>gi|116203433|ref|XP_001227527.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88175728|gb|EAQ83196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 452

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 21/166 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 194 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALA- 250

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQK--M 183
                   +R   ++ L   + +  ++ G+ + +++   DET          + +QK  +
Sbjct: 251 -------RLRHAEVIELLATV-IANLVEGEFMQLKNTARDETNPQWSEDALTYYLQKTYL 302

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +C + A++  A     +    +G NLG+ FQL DDLLD
Sbjct: 303 KTASLISKSCRAAALLGGADAQTVDAAYSYGRNLGLAFQLVDDLLD 348


>gi|327543259|gb|EGF29692.1| polyprenyl synthetase [Rhodopirellula baltica WH47]
          Length = 616

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 27/246 (10%)

Query: 2   NGGLPSKLQENSKRID------TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIR 54
           NG  P+   E  + ID      TI  D L +   H +       ++   Y A++GG    
Sbjct: 254 NGARPAVTPEQLEGIDPIAATETIALDFLARGGKHSRP-----FITLAAYDAMMGGDGTG 308

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           +    +   + N       R   +IE  H  SL+HDD+   D    R G+P VH ++   
Sbjct: 309 A----DGEDVLNRVPDAVRRAALSIETFHKASLVHDDI--EDGDAFRYGQPAVHQRFGTA 362

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-----THNIGLQGMLGGQML--DI 167
           TAI  G+ L+   + ++S  +  + D++ ++  + L       ++ L    G ++L  D 
Sbjct: 363 TAINVGDYLIGLGYRLLS--RNMMGDDVDAETRVDLLDSLAAAHVRLSEGQGAELLWRDA 420

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D  +       I  +KT      A  SG  MA  +    + +R F  NLG+ FQ+ +DL
Sbjct: 421 KDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGDASALIDPIRKFSRNLGVAFQIINDL 480

Query: 228 LDCEED 233
            D   D
Sbjct: 481 NDWAGD 486


>gi|227832180|ref|YP_002833887.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262183968|ref|ZP_06043389.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227453196|gb|ACP31949.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 334

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 17/192 (8%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRG 103
           +L GGK+ R  +    AS F     +   V AA  +E +H  +L HDD+  MD    RRG
Sbjct: 52  SLAGGKRFRPMMAL-LASEFGERSQSPEVVKAATVVEMVHVATLYHDDV--MDEAERRRG 108

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             + + ++    AI+AG+ LL +A  ++S   T   ++               + ++ GQ
Sbjct: 109 VDSANFRWTNSVAILAGDALLAHASRLMSQLDTHTVEHFAETF----------EELVTGQ 158

Query: 164 MLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           M +     E         + + KT  L+  A   GA  A A   + E LR  G  +G+IF
Sbjct: 159 MRETIGAGEANAVEHYTAVIREKTAVLIASAGYLGAYHAGAGPEQCEALRQIGAAVGMIF 218

Query: 222 QLADDLLDCEED 233
           Q+ DD++D   D
Sbjct: 219 QIVDDVIDIFSD 230


>gi|159903572|ref|YP_001550916.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9211]
 gi|159888748|gb|ABX08962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9211]
          Length = 323

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 45/201 (22%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  +V   +   +V+  L++   R+    E IH  SL+HDD+  +D    RRG P
Sbjct: 44  GGKRIRPGIVLLLSRALSVDGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A                    L+  +N+ +  +L   ++
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQA-----------------SWHLANLNNLDVVKLLSRVIM 144

Query: 166 DIQDEFI-------DETQVFMIQKMKTGALMCFACESGAIMAHASQN-------EKERLR 211
           D+ D  I       D  Q F     K+       C++ +++A++SQ         KE+L 
Sbjct: 145 DLADGEIKQGLYRFDAGQSFSTYLEKS------YCKTASLIANSSQAVGVLNDLPKEKLN 198

Query: 212 C---FGENLGIIFQLADDLLD 229
               FG+ LG+ FQ+ DD+LD
Sbjct: 199 SLYHFGKQLGLAFQVVDDILD 219


>gi|332291133|ref|YP_004429742.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169219|gb|AEE18474.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 325

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 18/186 (9%)

Query: 50  GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R   V   A + N   VN  T  R  + IE IH  SL+HDD+  +D+  IRRG  +
Sbjct: 45  GKQMRPMFVFLTAKMMNNGEVNDRT-YRGASVIELIHTASLVHDDV--VDDSNIRRGFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++  +    A++ G+ L +    ++S       DN  + L+  ++  + ++ +  G++L 
Sbjct: 102 LNALWKNKIAVLVGDFLFSKGL-LLSI------DNGDTDLLQIIS--VAVREISEGELLQ 152

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+      I E   + I + KT  L+   C  GA   HA   E +R+  FGE +G+ FQ+
Sbjct: 153 IEKARKLDITEDLYYEIIRQKTATLIAACCAMGACAVHAKDKEVKRMHKFGELIGMAFQI 212

Query: 224 ADDLLD 229
            DDL D
Sbjct: 213 KDDLFD 218


>gi|299738690|ref|XP_001834728.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea
           okayama7#130]
 gi|298403425|gb|EAU87176.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea
           okayama7#130]
          Length = 505

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 26/176 (14%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T +R+   +E +H  SL+HDD+  +D   +RRG  +    +    +++ GN +L  A   
Sbjct: 194 TQVRLAQIVEMLHTASLLHDDV--IDESALRRGAASAPSAFGNKQSVLGGNFVLGRASAA 251

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-------- 182
           +S    +L D   +QL+  +  N     ++ G++L +++  +D +     Q+        
Sbjct: 252 LS----RLGDPEVTQLIAGVLSN-----LVEGEILQLKEIQLDGSPETASQRRQDAWNIY 302

Query: 183 -----MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231
                +KT +LM     S  ++    + E  KE    +G NLGI FQL DD+LD E
Sbjct: 303 LHKTYLKTASLMAKGARSAVVLGGCKEGEIWKEIAYAYGRNLGIAFQLVDDVLDYE 358


>gi|326336630|ref|ZP_08202798.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691100|gb|EGD33071.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 327

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 37/200 (18%)

Query: 50  GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R   V   A L +   +N  T  R  A IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 46  GKQMRPMFVFLVAKLISNGIINERT-YRGAAVIELIHTATLVHDDV--VDDSNKRRGFFS 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157
           ++  +    A++ G+ LL+                    L+LS+ +N         + ++
Sbjct: 103 INALWKNKIAVLVGDYLLSKG------------------LLLSIDNNDFDLLKIISVAVR 144

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERLRCF 213
            M  G++L ++      I E   + I + KT  L+   C  GA  +A  +    E++R F
Sbjct: 145 EMSEGELLQMEKARRLDITEEVYYEIIRQKTATLIAACCAMGACSVAPENTTLIEKMRLF 204

Query: 214 GENLGIIFQLADDLLDCEED 233
           GE +G+ FQ+ DDL D  E+
Sbjct: 205 GECVGMAFQIKDDLFDYTEE 224


>gi|170587658|ref|XP_001898591.1| Polyprenyl synthetase family protein [Brugia malayi]
 gi|158593861|gb|EDP32455.1| Polyprenyl synthetase family protein [Brugia malayi]
          Length = 394

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 87/161 (54%), Gaps = 16/161 (9%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++    E IH  SL+HDD+  +D   IRRG  T++  +    A++ G+ +L  A +++ S
Sbjct: 140 KIAVISEMIHTASLVHDDV--IDKADIRRGSRTINALWGNKMAVLVGDFILARATQVLCS 197

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVF---MIQKM-KTGAL 188
                   I    ++S+   I ++ ++ G+ + + D   ++ TQ F   M +   KT +L
Sbjct: 198 --------IGRPSVISVMATI-IEDLVKGEFMQMNDGTDLNATQRFNKYMAKTYSKTASL 248

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              +C+S A+++  S+ ++     +G++LGI FQ+ DDLLD
Sbjct: 249 FANSCKSAAMLSDVSEADELSAYEYGKSLGIAFQMIDDLLD 289


>gi|294085837|ref|YP_003552597.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665412|gb|ADE40513.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 357

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 14/190 (7%)

Query: 49  GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R  +    A + + N     + A+++  A+E IH  +L+HDD+  +D   +RRG+
Sbjct: 69  GGKRMRPLMTLAGARIASPNTTSCSVAAIKLATAVEFIHSATLLHDDV--IDESNMRRGQ 126

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            T +  +    +++ G+ L   AFE+ + S    +   + S         I    + G  
Sbjct: 127 DTANALWGNDASVLVGDFLFARAFELMVESGNIDVLGTLSSASARITEAEIKQMTVAGNP 186

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
              ++D ++D      + + KT  L   A  SGA ++ A +   + +  +G NLG+ FQ+
Sbjct: 187 DTRLED-YLD------VIEGKTAILFAAAAASGARISGADEQITQAMHMYGLNLGLAFQI 239

Query: 224 ADDLLDCEED 233
            DD LD   D
Sbjct: 240 MDDALDYTAD 249


>gi|153951500|ref|YP_001398431.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938946|gb|ABS43687.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 297

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 24/216 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+L+ Q    +  +    +LS ++     GKK+RS L+   A    +    A ++ A I
Sbjct: 4   IDELIKQFLQELGYEPILNMLSNVK----SGKKLRSKLLLAIADESEI----AFKICAVI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S    +  
Sbjct: 56  ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSKMDARFA 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF-IDETQVFMIQKMKTGALMCFACESGA 197
                    S+  +  ++  +G  M +D+ ++F I++     +   KT  L+  +   GA
Sbjct: 114 ---------SIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGA 164

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A   + +      +G+NLG+ FQ+ DD+LD + D
Sbjct: 165 ILAGLYEQD---FAEYGKNLGLAFQMIDDILDIKSD 197


>gi|238026152|ref|YP_002910383.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1]
 gi|237875346|gb|ACR27679.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1]
          Length = 332

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPALLLLVAGALGDGSSHRHTLAAVVEFIHTATLLHDDV--VDESELRRGRKTAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 111 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE++   + + KT  L   +   GA++A A  + +     +G  +G  FQ+ DD L
Sbjct: 165 DADVDESRYMQVIRYKTAKLFEASARLGAVLAGADASTEAAAAEYGRRIGTAFQIMDDWL 224

Query: 229 D 229
           D
Sbjct: 225 D 225


>gi|119490906|ref|ZP_01623189.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106]
 gi|119453724|gb|EAW34883.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106]
          Length = 323

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D   +RRG PTVH  ++   A++AG+ L   +   +++
Sbjct: 72  RLAEITEMIHTASLVHDDV--VDESELRRGSPTVHSLFNNRIAVLAGDFLFAQSSWYLAN 129

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   + S++++ L      QG      L+  D  +           KT +L+  + 
Sbjct: 130 LDNLEVVKLLSKVIMDLAEGEIQQG------LNRFDTGMSINAYLEKSYYKTASLVANSS 183

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++  +++  S    E L  +G+NLG+ FQ+ DD+LD
Sbjct: 184 KAAGLLSGVSAELAEDLYSYGQNLGLAFQIVDDILD 219


>gi|15842975|ref|NP_338012.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|254233984|ref|ZP_04927309.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C]
 gi|308370246|ref|ZP_07666898.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002]
 gi|308371326|ref|ZP_07667135.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003]
 gi|308372523|ref|ZP_07667397.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004]
 gi|308373727|ref|ZP_07667640.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu005]
 gi|308374857|ref|ZP_07667880.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu006]
 gi|308376100|ref|ZP_07668191.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007]
 gi|13883314|gb|AAK47826.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|124599513|gb|EAY58617.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C]
 gi|308324901|gb|EFP13752.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002]
 gi|308329132|gb|EFP17983.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003]
 gi|308332967|gb|EFP21818.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004]
 gi|308336584|gb|EFP25435.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu005]
 gi|308340457|gb|EFP29308.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu006]
 gi|308344324|gb|EFP33175.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007]
          Length = 354

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 41  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+  
Sbjct: 97  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 152

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 153 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 204

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AL    C  GA++A+A       L  FG  LG+ FQ  DDL+
Sbjct: 205 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 247


>gi|13383247|dbj|BAB39474.1| putative GGPP synthase 3 [Metaplexis japonica]
          Length = 127

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 3/127 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  Y E  A++AG+ LL +AFE I +           +++  L   IG 
Sbjct: 1   NDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIVTATKGASSEQLVRVIEELAKCIGS 60

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E I +     +  I   KT AL+  +   GAI+  A+  +  +LR F
Sbjct: 61  EGLVAGQVVDICSEGISDVGLEHLEFIHLHKTAALLEGSVVLGAILGGANDVQISKLRKF 120

Query: 214 GENLGII 220
              +G++
Sbjct: 121 ARCIGLL 127


>gi|19112068|ref|NP_595276.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces
           pombe 972h-]
 gi|20137618|sp|O43091|DPS1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           1; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 1
 gi|1845555|dbj|BAA12314.1| decaprenyl diphosphate synthase subunit 1 [Schizosaccharomyces
           pombe]
 gi|6714819|emb|CAB66154.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces
           pombe]
          Length = 378

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 18/165 (10%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+    E IH  SL+HDD+  +D+  +RRG P+ ++ +    +I+AGN +L  A    S
Sbjct: 120 LRLAQITEMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARA----S 173

Query: 133 SPKTQLKDNIRSQLMLSLTHNI------GLQGMLGGQMLDIQDEFIDETQVFMIQK--MK 184
           +   +L++   ++L+ ++  ++       L+  +    L+I+    D    + I+K  +K
Sbjct: 174 TAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFD----YYIEKSFLK 229

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T +L+  +C++  I+   S         +G  +G  FQL DD+LD
Sbjct: 230 TASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLD 274


>gi|227488516|ref|ZP_03918832.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227543121|ref|ZP_03973170.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227091410|gb|EEI26722.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227181109|gb|EEI62081.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 358

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)

Query: 45  YALLGGKKIRSFLVTE--CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           + + GGK++R             + ++    R  +++E I   +LIHDD+  +D    RR
Sbjct: 44  FVVSGGKRVRPLYAWAGYVGGGGDESNTAVQRACSSLEFIQACALIHDDI--IDASDTRR 101

Query: 103 GKPTVH--------------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           G PTVH                     ++    AI+ G+  L +A ++      +L D +
Sbjct: 102 GNPTVHRRMETYLRDYPGFSGPTERAAEFGTSVAILIGDLALVWAEDMFMESGVELSDLM 161

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGAL-MCFACESGAI 198
           R++       N     ++GGQ+LDI  E + ET     +++   KT +  +    + G +
Sbjct: 162 RARPAW----NAMRAEVIGGQILDISAEAVGETSEDTARRVNIYKTASYTITRPLQIGGL 217

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +A    +  E    +G NLGI FQL DDLL
Sbjct: 218 LAGVDDSTLEAFAGYGRNLGIAFQLRDDLL 247


>gi|126434936|ref|YP_001070627.1| polyprenyl synthetase [Mycobacterium sp. JLS]
 gi|126234736|gb|ABN98136.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
          Length = 386

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 45  YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           Y   GGK +R  L +  C  L     L A L   A +E  H   LIHDD+   D  + RR
Sbjct: 50  YPRRGGKALRPALSIAVCLGLGG--QLDAILPTAATLELYHNAFLIHDDI--EDESWWRR 105

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GKPT+HI +    A+  G+ +L+ + + +     ++      +++ ++ H    +  + G
Sbjct: 106 GKPTMHIDHGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAHMT--RRTVEG 163

Query: 163 QMLDIQ-----DEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGEN 216
           Q ++++        +D+     + ++KT         ++GAI A    N  E L   G +
Sbjct: 164 QAIELEWVRSNAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPNRLEPLESLGRH 223

Query: 217 LGIIFQLADDLLDCEED 233
           LG  FQ+ DDLL+   D
Sbjct: 224 LGAAFQITDDLLNLRAD 240


>gi|319953718|ref|YP_004164985.1| trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237]
 gi|319422378|gb|ADV49487.1| Trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237]
          Length = 325

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 18/186 (9%)

Query: 50  GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R   V   + L N   VN  T  R  + IE IH  +L+HDD+  +D    RRG  +
Sbjct: 45  GKQMRPMFVFLTSKLINNGEVNERT-YRGASVIELIHTATLVHDDV--VDESNKRRGFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++  +    A++ G+ LL+    ++S       DN    L+  ++  + ++ M  G++L 
Sbjct: 102 INALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLKIIS--VAVREMSEGELLQ 152

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           I+      I E   + I + KT  L+   C  GA        E E  R FGE  G+ FQ+
Sbjct: 153 IEKARRLDITEAIYYEIIRQKTATLIAACCSLGACSVKPDSEEVEVFRKFGEYCGMAFQI 212

Query: 224 ADDLLD 229
            DDL D
Sbjct: 213 KDDLFD 218


>gi|124023595|ref|YP_001017902.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9303]
 gi|123963881|gb|ABM78637.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9303]
          Length = 323

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   +   + +  L+A   R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLISRALSADGDLSARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVA 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLAVVKLLSRVIMDLADGEVKQGLYR---- 157

Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                  D  Q F   ++K   KT +LM  + ++  +++  S   ++ L  FG  LG+ F
Sbjct: 158 ------YDTGQSFATYLEKSYCKTASLMANSVQAAGVLSGESVEHQKSLHHFGRQLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QVVDDILD 219


>gi|307175359|gb|EFN65378.1| Decaprenyl-diphosphate synthase subunit 1 [Camponotus floridanus]
          Length = 337

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 26/234 (11%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL 64
           P +L E+   +  + DD+ L+  ++  TQ   + +S   Y L G GK IR  L    A  
Sbjct: 16  PYRLAEDD--LKDMFDDIRLELITNT-TQEELQPIST--YYLDGQGKAIRPILTILMARA 70

Query: 65  FN-------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            N       ++H +  ++    E IH  SL+HDD+  +D   IRRGKP+V++ + +    
Sbjct: 71  INYHKGRNVLSH-SQRQIAMISEMIHSSSLLHDDV--IDQSDIRRGKPSVNVVWSQKKVA 127

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           +AG+ +L  A  ++S  +        SQ++  L     +Q  LG +      E  +E   
Sbjct: 128 MAGDYILAVACRMLSRLQNDEVTITISQIVTDLVQGEFMQ--LGSK------ETENERFA 179

Query: 178 FMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             + K   KT +L+    ++ AI+A    +  E    +G N+G+ FQL DDLLD
Sbjct: 180 HYLTKTYRKTASLIANCSKAVAILAEVDDHMIEMAFQYGRNVGLAFQLVDDLLD 233


>gi|220932319|ref|YP_002509227.1| heptaprenyl diphosphate synthase component II [Halothermothrix
           orenii H 168]
 gi|219993629|gb|ACL70232.1| heptaprenyl diphosphate synthase component II [Halothermothrix
           orenii H 168]
          Length = 326

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 18/190 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A L + +      + +AIE +H  +L+HDD+  +D   IRRG+ +  
Sbjct: 47  GGKRLRPLLVVLSARLGDFDKEKIYHIASAIELLHMATLVHDDI--IDEARIRRGEISAQ 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++ +  A+  G+ +L+ AF+I +   ++         +  L   +GL  +  G++   +
Sbjct: 105 SKFGKDVAVFLGDFMLSRAFDIFTLYLSR-------HSLRKLNKVVGL--ICEGEIDQYE 155

Query: 169 DEFIDETQVFMIQ-----KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D+F  E +V + +     + KT  L   +   GA  +         +  FG  LG  FQ+
Sbjct: 156 DKF--EYKVSIREYLRRIRRKTALLFGLSTYIGAYESGVRGRNLSNIYRFGLRLGTAFQI 213

Query: 224 ADDLLDCEED 233
            DD+LD   D
Sbjct: 214 QDDILDFVAD 223


>gi|317420115|emb|CBN82151.1| Decaprenyl-diphosphate synthase subunit 1 [Dicentrarchus labrax]
          Length = 422

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNH------LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRR 102
           GK IR  +V   A   N++       L   R  A I E IH  SL+HDD+  +D    RR
Sbjct: 140 GKAIRPIIVILMARALNIHSNRAGDLLPGQRALAMISEMIHTASLVHDDV--IDGSDKRR 197

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T++  + E  AI+AG+ +L+ A  +++         + SQ++  L     +Q  LG 
Sbjct: 198 GKRTINDMWGERKAILAGDLILSAASVLLARIGNNAVVKVMSQVIEDLVRGEFMQ--LGS 255

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +I+  +     E    +G+N+GI 
Sbjct: 256 K------ENENERFKHYLEKTFKKTASLIANSCKAVSILVTSDPEVHEIAYQYGKNVGIA 309

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 310 FQLVDDVLD 318


>gi|292493567|ref|YP_003529006.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
 gi|291582162|gb|ADE16619.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
          Length = 329

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 77/180 (42%), Gaps = 5/180 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  LV    +        AL    AIECI   SLIHDD   +D   IRR +P    
Sbjct: 44  GKRVRGCLVCLINNALGGKTEDALPRAIAIECIQAASLIHDDY--VDEDIIRRKRPATWT 101

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 A++ G+  + +A  I S  +   +D       ++   N G    L  QM   + 
Sbjct: 102 VEGPRRAVLLGD--VIFATAIQSMVELGNEDGATVARAIATVAN-GAYQELSWQMDGGEA 158

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             ++      I  +KTGAL   AC+ GAI   A Q        FG   G  +Q+ADDL D
Sbjct: 159 NLLEAGIYDRIIYLKTGALFGAACQLGAIATGAPQETSASAYAFGTRTGEAYQIADDLQD 218


>gi|254552488|ref|ZP_05142935.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
          Length = 247

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 100/223 (44%), Gaps = 24/223 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 4   RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 59

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+  
Sbjct: 60  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 115

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 116 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 167

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AL    C  GA++A+A       L  FG  LG+ FQ  DDL+
Sbjct: 168 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 210


>gi|33240492|ref|NP_875434.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33238020|gb|AAQ00087.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 323

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 17/191 (8%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L+++  S          R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRIRPGIVLLISKALSAEGELSSKHRRLAEITEMIHTASLVHDDV--LDEASTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML---GG 162
           TVH ++D   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHNRFDHKVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLAEGEVKQGIYRFDPN 161

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q LD+   +++++        KT +L+  + ++  ++++ S    + L  FG+ LG+ FQ
Sbjct: 162 QSLDV---YLEKSYC------KTASLIANSAQAVGVLSNESDYHLKCLYNFGKQLGLAFQ 212

Query: 223 LADDLLDCEED 233
           + DD+LD   D
Sbjct: 213 VVDDILDFTSD 223


>gi|330815463|ref|YP_004359168.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3]
 gi|327367856|gb|AEA59212.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3]
          Length = 332

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 8/155 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +FE++   
Sbjct: 79  LAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDYLYSRSFEMMVGV 136

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  +R   +LS    I  +G +  Q+L++ D  +DE++   + + KT  L   +  
Sbjct: 137 G-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDESRYMQVIRYKTAKLFEASAR 190

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GA++A A  + +     +G  +G  FQ+ DD LD
Sbjct: 191 LGAVLAGADASTEAAAAEYGRRIGTAFQIMDDWLD 225


>gi|84394037|ref|ZP_00992774.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01]
 gi|84375323|gb|EAP92233.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01]
          Length = 323

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 12/224 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69
           K I T+  + + +    +Q Q N    L++ + + ++  GGK++R  L    A       
Sbjct: 4   KAIQTLTANDMAKVNETIQAQLNSDVSLINQLGFYIVSGGGKRLRPLLALLSARALGYQG 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +   A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+
Sbjct: 64  EAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQ 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++++  +     ++   ++S   N+  +G +  Q+++  +    E     +   KT  L 
Sbjct: 122 MMTTLGS-----LKILELMSEAVNVIAEGEVQ-QLMNCNNPDTTEESYMQVIYSKTARLF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + GAI++ +S   +  ++ +G+ LG  FQL DD++D   D
Sbjct: 176 EAATQIGAILSESSPEIETAMQNYGKYLGTAFQLIDDVMDYTAD 219


>gi|302536833|ref|ZP_07289175.1| polyprenyl synthetase [Streptomyces sp. C]
 gi|302445728|gb|EFL17544.1| polyprenyl synthetase [Streptomyces sp. C]
          Length = 290

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKT 136
           E  H ++L+HDD+  +D    RRG+PT    +    AI+AG+ ++  A  +++    P +
Sbjct: 38  ELAHNFTLLHDDI--IDRDVRRRGRPTAWTVFGTPHAILAGDAMMALALRLLAEDPHPAS 95

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
                  +  ++ L           GQ  D   E    +   +   +   KTGAL+  AC
Sbjct: 96  ARASARLAACVVELCE---------GQQADCAFEERAHVSLDECLTMAAAKTGALLGCAC 146

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             GA+ A A   E E +  FG   G+ FQL DDL+
Sbjct: 147 ALGALYAGAGPEEVEAVDAFGREAGLAFQLIDDLI 181


>gi|118468511|ref|YP_888517.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118169798|gb|ABK70694.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 362

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 31/209 (14%)

Query: 45  YALLGGKKIR-SFLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R +F      S+       A    LR+ +A+E +   +LIHDD+  +D+  
Sbjct: 47  FVLRGGKRVRPAFAYWGWRSVIEPADAVAGPDVLRLFSALELLQACALIHDDV--IDDSA 104

Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG PTVH  + E                  AI+AG+  L++A +I++     +  + R
Sbjct: 105 TRRGLPTVHRLFTEQHHERGWLGSERQFGLSAAILAGDLALSWADDIVAGADLPVDAHRR 164

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGAL-MCFACESGAIM 199
            Q   ++  +I  + +LGGQ LDI  E   +  V     +   KT +  +    + GA  
Sbjct: 165 VQ---TVWRHIRTE-VLGGQYLDIVTESSGDESVASALNVNTFKTASYTVARPLQLGAAA 220

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228
           A    + +E     G +LG+ FQL DD+L
Sbjct: 221 AADRPDVQELFHRIGNDLGVAFQLRDDVL 249


>gi|315186534|gb|EFU20293.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578]
          Length = 327

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 17/164 (10%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R+ AA+E +H  +L+HDD+  +D+   RRG   +H  Y    A++ G+ L   A E+++
Sbjct: 69  VRLAAALEMLHMATLVHDDI--VDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVA 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTG 186
              ++      S+         G++ +L G++ +++       E     +       KTG
Sbjct: 127 EYASREHAVFLSR---------GVRHILDGEIEEVEVRRALGRESFSLRRYLRRILRKTG 177

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            L   A   GA  A A +    RLR  G N+G+ FQ+ DD+LD 
Sbjct: 178 LLFVVAFHLGASEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDV 221


>gi|308275697|gb|ADO25596.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
           pseudotuberculosis I19]
          Length = 339

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 17/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R       AS +  + ++   ++    +E  H  +L HDD+  MD    RRG  +
Sbjct: 60  GGKRFRPMFAL-LASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVES 116

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + +++   AI+AG+ LL +   +++   T   D +R       +   G   ++ GQM +
Sbjct: 117 ANARWNNSVAILAGDILLAHVSRLMADLGT---DTVRH-----FSETFG--DLVTGQMRE 166

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            I     D  + +M + + KTG L+  A   GA+ + A+ +  E LR +G  +G++FQ+ 
Sbjct: 167 TIGVGEGDPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIV 226

Query: 225 DDLLDCEED 233
           DD++D   D
Sbjct: 227 DDIIDIFSD 235


>gi|37520322|ref|NP_923699.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421]
 gi|35211315|dbj|BAC88694.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421]
          Length = 325

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     LV+   + +        R+    E IH  SL+HDD+  +D   +RRG  
Sbjct: 46  GGKRIRPALVLLVSRATAAYGEPTERHRRLAEITEMIHTASLVHDDV--IDTSAVRRGID 103

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV+ ++    A++AG+    Y F + S+   +L      +L+  +  + G +G L    L
Sbjct: 104 TVNSRFGNRVAVLAGD----YLFGMASAYLARLGSLEVVELLGIVISHFG-EGELLQSTL 158

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               +   E Q       KT +LM     + A+++ +     E L  +G +LGI FQ+ D
Sbjct: 159 QFDSDLTFE-QYIDKSFYKTASLMAGTSRAAAVLSESPAAVCEALYEYGRHLGIAFQVID 217

Query: 226 DLLD 229
           DLLD
Sbjct: 218 DLLD 221


>gi|223938575|ref|ZP_03630466.1| Polyprenyl synthetase [bacterium Ellin514]
 gi|223892694|gb|EEF59164.1| Polyprenyl synthetase [bacterium Ellin514]
          Length = 189

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 11/128 (8%)

Query: 111 YDEVTAIIAGNGLLTYAFEII----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + E  A++AG+ LLT AFEI     S P+   KD     L+L +    G   ++ GQ+ D
Sbjct: 1   FGEGIAVLAGDALLTQAFEIAALSPSWPRYTHKD-----LVLEIARASGSLQLIAGQVAD 55

Query: 167 IQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++ E   I   Q+  I + KT AL+C +   G + A+ +  + + L  FG N+G+ FQ+ 
Sbjct: 56  LEAEGKRISTAQLKYIHERKTSALLCCSVRLGGMSANCTPAQLKALTDFGYNVGLAFQII 115

Query: 225 DDLLDCEE 232
           DD+LD  +
Sbjct: 116 DDILDVTQ 123


>gi|189464891|ref|ZP_03013676.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM
           17393]
 gi|189437165|gb|EDV06150.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM
           17393]
          Length = 324

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 16/161 (9%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    ++E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++ G+ LL  A  ++ 
Sbjct: 68  LHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIYNNKVAVLVGDYLL--ATSLVQ 123

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGAL 188
             KT       +  ++ +   +G Q +  G++L + +    +F +E    +I+K KT  L
Sbjct: 124 VGKTH------NYAIIEVVSRLG-QNLSEGELLQLSNVSSLQFSEEVYFDVIRK-KTAVL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                +SGA+    +  + E  R FGE +G+ FQ+ DD+ D
Sbjct: 176 FAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIKDDIFD 216


>gi|313675096|ref|YP_004053092.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126]
 gi|312941794|gb|ADR20984.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126]
          Length = 324

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 14/183 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V   A +    +    R  A IE +H  +L+HDD+  +D+   RRG  +++ 
Sbjct: 46  GKQMRPMFVFLSAGVHGQINEATYRGAALIELLHTATLVHDDV--VDDANYRRGFFSINA 103

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AI+ G+ LL+    ++S       DN    L+  ++    ++ M  G++L I+ 
Sbjct: 104 LWKNKIAILVGDYLLSRGL-LLSI------DNEDFDLLKIVSE--AVREMSEGELLQIEK 154

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                I E   + I K KT +L+   C  G+   +   +  E+++ FGE +G+ FQ+ DD
Sbjct: 155 ARKLNITEDIYYDIIKQKTASLIASCCAVGSRSVNKDDDISEKMKLFGEKVGMAFQIKDD 214

Query: 227 LLD 229
           L D
Sbjct: 215 LFD 217


>gi|264676899|ref|YP_003276805.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
 gi|299529717|ref|ZP_07043154.1| Polyprenyl synthetase [Comamonas testosteroni S44]
 gi|262207411|gb|ACY31509.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
 gi|298722580|gb|EFI63500.1| Polyprenyl synthetase [Comamonas testosteroni S44]
          Length = 309

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPALLLLIAGALGHQGKNKYILAAVVELIHTATLLHDDV--VDESTLRRGRATAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    +     +R   +LS   N+  +G +  Q+++  
Sbjct: 88  ETFGNPASVLVGDFLHTRSFQMMVEVGS-----MRVLQILSDATNVIAEGEVQ-QLINTH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  ++E     + + KT  L   + +  A++A A+   ++    +G+ LG  FQ+ DD+L
Sbjct: 142 DASLNEAGYLHVIRSKTAQLFEASAQLAAVLAGATPEVEQACAAYGQALGTAFQIIDDVL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|313205998|ref|YP_004045175.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445314|gb|ADQ81669.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022311|gb|EFT35339.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM]
 gi|325336561|gb|ADZ12835.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer
           RA-GD]
          Length = 325

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 16/184 (8%)

Query: 50  GKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK++R      CA L  +VN  T  R  + IE IH  +L+HDD+  +D  + RR   +++
Sbjct: 46  GKQMRPMFAFLCAKLVGDVNEKT-YRGASMIELIHTATLVHDDV--VDESFKRRNFFSIN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ LL+ +  ++S+      DN    L+  ++  I  + M  G++L ++
Sbjct: 103 ALWKNKIAVLVGDYLLSKSV-LLST------DNKDFDLLSVISTTI--REMSEGELLQLE 153

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                 I E   + I + KT  L+   CE G +     +   +++R FG   G+ FQ+ D
Sbjct: 154 KARKLDITEEVYYEIIRQKTATLIAACCEIGVLSNGVDETMAKKMRDFGTYTGMAFQIKD 213

Query: 226 DLLD 229
           DL D
Sbjct: 214 DLFD 217


>gi|297623348|ref|YP_003704782.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093]
 gi|297164528|gb|ADI14239.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093]
          Length = 338

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 29/242 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L E  + +D  +   L QT  H        LL    Y   GGK++R  L+    +    
Sbjct: 3   ELSELQRALDEAIFRELPQTHPHPDVSAFYALLR--DYPARGGKRLRGTLLLLSTAAHGA 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L V AA+E    + LIHDD+   D+   RRG+P +H       A+  G+ L  Y 
Sbjct: 61  PWERGLNVAAALELFQNWVLIHDDI--EDDSEDRRGRPALHRTAGVPVALNVGDALHIYM 118

Query: 128 FEII---------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEF-ID 173
           +  +         ++P+T  +     + M+S T          GQ LD+    +  F I 
Sbjct: 119 WRTLLRELRGDARAAPETLPRLLEAFEWMISRTAE--------GQHLDLTWVAEGRFEIS 170

Query: 174 ETQVFMIQKMKTGALMCFA-CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           E     +  +KT         E GA+ A A  +   RLR  GE+LG+ FQ+ DD+L+   
Sbjct: 171 EAAYLEMVTLKTAYYTVVGPLELGALCAGAEPD--PRLRRAGEDLGVAFQIRDDVLNLMA 228

Query: 233 DL 234
           D+
Sbjct: 229 DV 230


>gi|183983202|ref|YP_001851493.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M]
 gi|183176528|gb|ACC41638.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M]
          Length = 345

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H +SL+HDD+  MD    RRG+ TV   + E +AI+ G+ L      +++     L 
Sbjct: 94  ELMHNFSLVHDDV--MDRDVTRRGRATVWTVWGETSAIMLGDALHVLCSRVLAE---MLA 148

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196
             +    + +L  +    G+  GQ+ D   E      V    +M   KT  LM  ACE G
Sbjct: 149 PEVAMTAIATLESS--FLGLRVGQVDDGDFETPKRVTVDGYLRMAAGKTAGLMGCACELG 206

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A+ A A       +R FG +LG+ FQ+ DD++    D
Sbjct: 207 ALTAGADPLTVSAMREFGYHLGLAFQILDDIVGIWGD 243


>gi|118085662|ref|XP_418592.2| PREDICTED: similar to PDSS1 protein [Gallus gallus]
          Length = 366

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 84  GKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRR 141

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 142 GKMTVNQIWGERKAVLAGDFILSAASLALA--------RIGNTTIISVLTQV-IEDLVRG 192

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +I+        E    +G+N+GI
Sbjct: 193 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKVHEIAYQYGKNVGI 252

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 253 AFQLIDDVLD 262


>gi|300857719|ref|YP_003782702.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685173|gb|ADK28095.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205461|gb|ADL09803.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
           pseudotuberculosis C231]
          Length = 339

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 17/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R       AS +  + ++   ++    +E  H  +L HDD+  MD    RRG  +
Sbjct: 60  GGKRFRPMFAL-LASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVES 116

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + +++   AI+AG+ LL +   +++   T   D +R       +   G   ++ GQM +
Sbjct: 117 ANARWNNSVAILAGDILLAHVSRLMADLGT---DTVRH-----FSETFG--DLVTGQMRE 166

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            I     D  + +M + + KTG L+  A   GA+ + A+ +  E LR +G  +G++FQ+ 
Sbjct: 167 TIGVGEGDPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIV 226

Query: 225 DDLLDCEED 233
           DD++D   D
Sbjct: 227 DDIIDIFSD 235


>gi|157866922|ref|XP_001682016.1| farnesyl synthetase [Leishmania major strain Friedlin]
 gi|68125467|emb|CAJ03328.1| putative solanesyl-diphosphate synthase [Leishmania major strain
           Friedlin]
          Length = 359

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 13/165 (7%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           L  LR+    E IH  SL+HDD+  +DN   RRG+P +H  YD   A++AG+ +L  A  
Sbjct: 107 LPFLRLAEVTELIHTASLLHDDV--IDNTDTRRGRPALHKVYDAKRAVLAGDYMLARASF 164

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            I++ +         ++++ +T    L+ +  G+++ + D   D  +       KT +L+
Sbjct: 165 YIATLQV-------PRIVILMT--TALEELTSGELMQM-DGCFDIPRYEQKSFCKTASLI 214

Query: 190 CFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
             +  S A++A       E+    FG++LGI FQ+ DD LD   D
Sbjct: 215 ANSLASTAVLAGPGNEALEQTAFDFGKHLGIAFQILDDCLDITGD 259


>gi|71897572|ref|ZP_00679817.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
 gi|71732475|gb|EAO34528.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
          Length = 333

 Score = 64.7 bits (156), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L                ++ A IE IH  +L+HDD+  +D   +RR   T +
Sbjct: 54  GGKRLRPMLTMLAGHAIGHTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSSSTAN 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +F+++    T+L +    Q++   T+ I    +L  Q+L + 
Sbjct: 112 ALWGNAPSVLVGDFLYSRSFQLM----TELANLEVMQILAETTNRISEGEVL--QLLHVH 165

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DET    + + KT  L   A + GA+ +HA    + R+  +G  LG  FQ+ DD+L
Sbjct: 166 NPDTDETTYLSVIERKTAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVL 225

Query: 229 D 229
           D
Sbjct: 226 D 226


>gi|220928949|ref|YP_002505858.1| polyprenyl synthetase [Clostridium cellulolyticum H10]
 gi|219999277|gb|ACL75878.1| Polyprenyl synthetase [Clostridium cellulolyticum H10]
          Length = 318

 Score = 64.7 bits (156), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 19/203 (9%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T  N  L+ AI   +  GGK++R  +V   +    +     +++ +AIE +H  +LIHDD
Sbjct: 24  TSKNKLLVKAIADTVGAGGKRLRPAMVIVSSYFGKIRQENLIQLASAIELLHTATLIHDD 83

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLS 149
           +  +DN   RR   TV+ +Y    AI  G+ L T A  +++   P  +L    R+     
Sbjct: 84  V--LDNSPYRRNNETVYKKYGTDMAIYCGDFLYTKALLMLADIVPANKLTIAARA----- 136

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGAIMAHASQNE 206
                 ++ +  G++   +D+++    V    K    KT  L   +C  GA+ A  +   
Sbjct: 137 ------VKTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLFSASCALGALCAKCNPRI 190

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
              L   G   G++FQL DD  D
Sbjct: 191 TNSLSKLGFYYGVMFQLIDDFRD 213


>gi|227505153|ref|ZP_03935202.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum
           ATCC 6940]
 gi|227198266|gb|EEI78314.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum
           ATCC 6940]
          Length = 334

 Score = 64.7 bits (156), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 17/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R  +    AS F     +   V AA  +E +H  +L HDD+  MD    RRG  +
Sbjct: 55  GGKRFRPMMAL-LASEFGARPGSPEVVKAATVVEMVHVATLYHDDV--MDEAERRRGVES 111

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + ++    AI+AG+ LL +A  ++S   T   ++               + ++ GQM +
Sbjct: 112 ANFRWTNSVAILAGDVLLAHASRLMSQLDTHTVEHFSETF----------EELVTGQMRE 161

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            I     +  + +M + + KT  L+  A   GA  A A+  +   LR  G  +G+IFQ+ 
Sbjct: 162 TIGAGEANAVEHYMAVIREKTAVLIASAGYLGAYHAGATPEQAAALRQIGGAIGMIFQIV 221

Query: 225 DDLLDCEED 233
           DD++D   D
Sbjct: 222 DDIIDIFSD 230


>gi|11066676|gb|AAG28699.1|AF272737_2 CrtE [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 425

 Score = 64.7 bits (156), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 31/207 (14%)

Query: 45  YALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           + L GGK++R   L     S    +   ALR+G A+E I   +LIHDD+  MD   +RRG
Sbjct: 79  FTLDGGKRVRPRLLWWGMRSCGAADTTAALRLGVALELIQSCALIHDDV--MDRSRLRRG 136

Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           KP VHI                 +    A++AG+  L +A + ++  +T L   ++ + +
Sbjct: 137 KPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDLALAWADDTVA--ETALS-AVQRRRI 193

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQN 205
             L   +  + M+ GQ LD++ +    + V   Q ++T  L    ++ E    +  A   
Sbjct: 194 GPLWRTMRTE-MVAGQYLDLRGQVRGGSSVE--QALRTACLKSASYSVERPLALGAALAG 250

Query: 206 EKER----LRCFGENLGIIFQLADDLL 228
             E     LR  G   GI FQL DDLL
Sbjct: 251 ADEATTDALRSAGRCAGIAFQLRDDLL 277


>gi|311111182|ref|ZP_07712579.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22]
 gi|311066336|gb|EFQ46676.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22]
          Length = 341

 Score = 64.7 bits (156), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 20/164 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L+  +  ++S 
Sbjct: 82  KIATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLVALSLTLLS- 138

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
                 +N +S L   +     +Q +L G+     + +   I E +     K KTG L  
Sbjct: 139 ------ENAQS-LHSVIADGKTMQNILVGETEQYNNAYNIDISEKEYLDQIKGKTGVLFG 191

Query: 191 FAC-----ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC     ESG  +   ++  K   + FGE LG  FQL DD+LD
Sbjct: 192 LACFIGAYESGTKVTKVTKALKA--KKFGEYLGQAFQLRDDILD 233


>gi|116070412|ref|ZP_01467681.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107]
 gi|116065817|gb|EAU71574.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107]
          Length = 323

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  +V   +     +  LT    R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRIRPGIVLLISRALAADGELTQRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH ++D   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFDARVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLY---RF 158

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D    F  ET  F     KT +L+  +  +  +++  +  + + L  FG  LG+ FQ+ D
Sbjct: 159 DTSQSF--ET-YFEKSYCKTASLIANSSRAAGVLSECNPQQLDSLYQFGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|194334004|ref|YP_002015864.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311822|gb|ACF46217.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 324

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 14/190 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  LV   A +       + R    +E +H  +L+HDD+  +D   +RRG  +++ 
Sbjct: 44  GKQVRPLLVMLGAKVCGGVADASYRAAIMVELLHSATLVHDDV--VDGAEMRRGLASINA 101

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ +L+         K     + RS  M+S      ++ M  G++L IQ 
Sbjct: 102 VWKNKIAVLIGDYMLSKGLLYSLDHK-----DYRSLHMVS----DAVRRMSEGEILQIQK 152

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                I E     +   KT +L+  +C  G       + + E LR +GE LG+ FQ+ DD
Sbjct: 153 TRSLDISEEDYLKVISDKTASLLSTSCAMGGASVTDDEEKIEALRNYGEFLGLAFQIRDD 212

Query: 227 LLDCEEDLPK 236
           LLD   D  K
Sbjct: 213 LLDYTGDSNK 222


>gi|299115852|emb|CBN74415.1| geranyl-diphosphate synthase [Ectocarpus siliculosus]
          Length = 513

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 29/205 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIH 89
           + L GGKKIR  +V   +   N N                   LR+    E IH  SL H
Sbjct: 218 FELDGGKKIRPTMVILMSQACNSNSQQVRPDVQPGTELVNPLQLRLAEITEMIHAASLFH 277

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RRG P+V+  +    AI+AG+ LL  +    S    +L+     +LM  
Sbjct: 278 DDV--IDEADTRRGVPSVNKVFGNKLAILAGDFLLARS----SMSLARLRSLESVELM-- 329

Query: 150 LTHNIGLQGMLGGQMLDIQD-EFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNE 206
              +  ++ ++ G++L ++  E       + ++K   KTG+LM  +C++ A++       
Sbjct: 330 ---SAAIEHLVKGEVLQMRPTEDGGGAFEYYVRKNYYKTGSLMANSCKASAVLGQHDLEV 386

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +E    +G+ +G+ FQL DD+LD E
Sbjct: 387 QEVAFEYGKRVGLAFQLVDDILDFE 411


>gi|188995807|ref|YP_001930059.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC
           33277]
 gi|188595487|dbj|BAG34462.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC
           33277]
          Length = 324

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 50  GKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  L    A++     + T L     +E IH  +LIHDD+  +D    RRG PT++
Sbjct: 45  GKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDV--IDMASTRRGVPTLN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QMLDI 167
             +D   A++ G+ +L+ A       +    ++IR   ++++   +G +   G  +  + 
Sbjct: 103 AFFDNRVAVLMGDFVLSSAL-----MRAIALNDIR---IITIISQLGRELSEGEIRQFET 154

Query: 168 QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            D+ I +  ++M + + KT  L     E GAI   A     E+++  GE LG  FQ+ DD
Sbjct: 155 ADKVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVEKVKRVGELLGYAFQIRDD 214

Query: 227 LLD 229
           + D
Sbjct: 215 IFD 217


>gi|221068969|ref|ZP_03545074.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
 gi|220713992|gb|EED69360.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
          Length = 309

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPALLLLIAGALGHQGKNKYILAAVVELIHTATLLHDDV--VDESTLRRGRATAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++    +     +R   +LS   N+  +G +  Q+++  
Sbjct: 88  ETFGNPASVLVGDFLHTRSFQMMVEVGS-----MRVLQILSDATNVIAEGEVQ-QLINTH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  ++E     + + KT  L   + +  A++A A+   ++    +G+ LG  FQ+ DD+L
Sbjct: 142 DASLNEAGYLHVIRSKTAQLFEASAQLAAVLAGATPEMEQACATYGQALGTAFQIIDDVL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|332286668|ref|YP_004418579.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7]
 gi|330430621|gb|AEC21955.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7]
          Length = 308

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  ++   A+           + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRMRPAMLLMMANALGYQGGNHHLLAAVVEFIHTATLLHDDV--VDESDLRRGRSTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     + +  +LS    +  +G +  Q+L++ 
Sbjct: 88  AVFGNAASVLVGDYLYSRSFEMMVQSGS-----MPAMSVLSAATTVIAEGEVL-QLLNVH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   + + KT  L   A + GAI+  A+  ++     +G ++G  FQL DD+L
Sbjct: 142 DPDVSLDRYLQVVRYKTAKLFEAATQVGAIIGGATTEQEAAAAAYGRHIGTAFQLIDDVL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|139439484|ref|ZP_01772916.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC
           25986]
 gi|133775037|gb|EBA38857.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC
           25986]
          Length = 341

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 11/187 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK+ R  +    A+    +  +A    AAIE     +LIHDD+   DNG +RRGKP +H
Sbjct: 52  AGKRHRPLICMLAATAVGGSFESARSAAAAIEHFQSGALIHDDIA--DNGQLRRGKPCMH 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-- 166
           +      AI  G+  LT   + +    T L+ +++ +++  LT  I     + GQ LD  
Sbjct: 110 LTEGTGLAINCGDLALTMVTKTVLDDPT-LESDVKLRVLHELTEMI--VRTIEGQALDLG 166

Query: 167 -IQDEFID-ETQVFMIQKMKTGALMCFACE--SGAIMAHASQNEKERLRCFGENLGIIFQ 222
            ++D   D     ++       A    A    +GAI+   S  + E LR FG + G+ FQ
Sbjct: 167 WVRDGRFDISVDDYLDMATHKTAFYSGATPLAAGAIIGGGSDEQIEALRAFGLHTGLAFQ 226

Query: 223 LADDLLD 229
           + DDLL+
Sbjct: 227 IQDDLLN 233


>gi|302330014|gb|ADL20208.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
           pseudotuberculosis 1002]
          Length = 339

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 17/189 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R       AS +  + ++   ++    +E  H  +L HDD+  MD    RRG  +
Sbjct: 60  GGKRFRPMFAL-LASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVES 116

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + +++   AI+AG+ LL +   +++   T   D +R       +   G   ++ GQM +
Sbjct: 117 ANARWNNSVAILAGDILLAHVSRLMADLGT---DTVRH-----FSETFG--DLVTGQMRE 166

Query: 167 -IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            I     D  + +M + + KTG L+  A   GA+ + A+ +  E LR +G  +G++FQ+ 
Sbjct: 167 TIGVGEGDPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIV 226

Query: 225 DDLLDCEED 233
           DD++D   D
Sbjct: 227 DDIIDIFSD 235


>gi|116512181|ref|YP_809397.1| geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|116107835|gb|ABJ72975.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 319

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R   +   +   +++    L + A++E +H  +L+HDD+  +D+   RRG  T+ 
Sbjct: 47  GGKMLRPAYLLLFSGFTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLS 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDI 167
            +Y    A+ AG+ L      ++S    +L +         LT NIG ++ +LGG++  +
Sbjct: 105 AKYGPEIAVYAGDYLFIAVIRLMSEHSLELSN---------LTKNIGSIERLLGGELGQL 155

Query: 168 QDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              F + +T    I+ +  KTG L   +     +++  +   K R    G N+GI FQ+ 
Sbjct: 156 NHYFNLQQTLDDYIENISGKTGELFALSASVAPLISKNNALTK-RAYKIGMNIGISFQIM 214

Query: 225 DDLLD 229
           DD LD
Sbjct: 215 DDYLD 219


>gi|4732024|gb|AAD28559.1|AF118395_1 trans-prenyltransferase [Homo sapiens]
          Length = 376

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 19/194 (9%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDN 97
           Y  + GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+
Sbjct: 89  YFDVKGKAFRPIIVVLMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDD 146

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ
Sbjct: 147 ASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ 206

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGE 215
             LG +      E  +E     ++K   KT +L+  +C++ +++        E    +G+
Sbjct: 207 --LGSK------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 258

Query: 216 NLGIIFQLADDLLD 229
           N+GI FQL DD+LD
Sbjct: 259 NVGIAFQLIDDVLD 272


>gi|86606912|ref|YP_475675.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
 gi|86555454|gb|ABD00412.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
          Length = 323

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 25/225 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++N  R+ +    +L   A H        L SA      GGK IR  +V   A     
Sbjct: 17  RLRQNLSRLVSAKHPILAMAAEH--------LFSA------GGKGIRPAIVLLIARATTP 62

Query: 68  N-HLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +  +T    R+    E IH  SL+HDD+  +D   +RRG  TV+  +D   A++AG+ L 
Sbjct: 63  DGEITPQHWRLAEITEMIHTASLVHDDV--IDTADVRRGIDTVNTLFDNRVAVLAGDYLF 120

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A   +++      DN+    +LS       +G +  Q L   D  +   +       K
Sbjct: 121 GQAAWYLAN-----LDNLEVVKLLSKVIMDLPEGEVR-QSLTRFDPDVSLEEYLAKSFYK 174

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T +L+  + ++  +++  S    +RL  FG +LGI FQ+ DDLLD
Sbjct: 175 TASLISGSSKAAGLLSGVSPEVADRLFDFGRDLGIAFQIVDDLLD 219


>gi|290957483|ref|YP_003488665.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22]
 gi|260647009|emb|CBG70108.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei
           87.22]
          Length = 409

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV             A+R  AA+E +H ++L+HDD+  MD    RR + T   
Sbjct: 125 GKAIRPALVLAAVHALGGRESVAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRATAWT 182

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-L 165
            +    AI+AG+ +   A  +++    P +       +  ++ L         L G+  L
Sbjct: 183 VFGVPDAILAGDAMQALAQRLLAEDPHPASAAAAARLASCVVELCEGQHTDTELEGRPPL 242

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+    +DE  V  + + KTGAL+  AC  GA+ A A++ + E L  FG   G+ FQL D
Sbjct: 243 DVT---LDE--VLTMAEAKTGALLGCACAIGALYAGAAEEDVEALDAFGREAGLAFQLID 297

Query: 226 DLL 228
           D++
Sbjct: 298 DVI 300


>gi|254818358|ref|ZP_05223359.1| GrcC1 [Mycobacterium intracellulare ATCC 13950]
          Length = 338

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 24/231 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + +++   RI+ ++D   L++A  + T+    L  A      GGK+ R       
Sbjct: 15  DAAFAATVRDGVGRIEQLMD-TELRSADEIMTESLTHLFKA------GGKRFRPLFTVLS 67

Query: 62  ASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  N +       GA IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG
Sbjct: 68  AQLGPNPDAADVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAG 125

Query: 121 NGLLTYAFEIIS--SPKT-QLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           + L   A  ++S   P+  +L     +QL+   +    GL G   G          D  +
Sbjct: 126 DYLFATASRLVSRLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGA---------DPIE 176

Query: 177 VFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++ +   KT  L+  A   GA+ + A  ++ ERL   G  +G  FQ++DD
Sbjct: 177 HYLKVVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDD 227


>gi|57242131|ref|ZP_00370071.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis
           RM3195]
 gi|57017323|gb|EAL54104.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis
           RM3195]
          Length = 297

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 22/187 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GKK+RS L+   A         A  + A IE IH  SL+HDD+  +D   +RRG  +++ 
Sbjct: 30  GKKLRSKLLLSIAG----ESQKAYVLCAIIELIHLASLLHDDI--IDESELRRGARSINA 83

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
           ++    A++ G+ L + AF  +S  + ++     SQ++ +    + +     G+++D+  
Sbjct: 84  EFGAKNALMLGDILYSKAFYELSKQEAKI-----SQILSNAVCKLAI-----GELMDVNL 133

Query: 169 -DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +F  + + ++     KT  L+  +   GA++A  ++N       +G+NLG+ FQ+ DD
Sbjct: 134 SKKFNPDKEAYLTMIYHKTAVLIEASARCGALLAKLNEN---AFAEYGKNLGLAFQIVDD 190

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 191 ILDITGD 197


>gi|320334064|ref|YP_004170775.1| trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM
           21211]
 gi|319755353|gb|ADV67110.1| Trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM
           21211]
          Length = 316

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 18/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R  L         ++ H     V  A+E +H  SL+HDDL  +D+   RRG PT 
Sbjct: 38  GGKRTRPALTYLAFRALGLDAHPQEHDVAVAVELLHSASLLHDDL--IDDADTRRGAPTA 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++  V ++++G+ +L+    +++S    L   +R+    +  H      +  G++L  
Sbjct: 96  FRRFGNVVSVMSGDYMLSKLLVLLASTTPGL---VRA-FGETAAH------VCEGEVLQF 145

Query: 168 Q----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           Q     E+  E  + +I   KT AL+  A  + A++  AS   +  L  FG   G+ FQ+
Sbjct: 146 QVAAYGEYSHEHYLNVIYG-KTAALVELAASAPALLVGASDAHQRALADFGREYGMAFQM 204

Query: 224 ADDLLD 229
            DDLLD
Sbjct: 205 QDDLLD 210


>gi|153807183|ref|ZP_01959851.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185]
 gi|149130303|gb|EDM21513.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185]
          Length = 324

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK +R  LV   A L+ V     L    ++E +H  SL+HDD+  +D    RRG+ +V+
Sbjct: 44  SGKMMRPILVLLVARLYGVVSPATLHAAVSLELLHNASLVHDDV--VDESTERRGQLSVN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML--- 165
             ++   A++ G+ LL  A  ++ +  T       S  ++ L  ++G Q +  G++L   
Sbjct: 102 AIFNNKVAVLTGDYLL--ATSLVHAELTN------SHQIIRLVSSLG-QDLADGELLQLS 152

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           ++ +    ET  F + + KT AL      + A     S+ E +  R  GE +GI FQ+ D
Sbjct: 153 NVSNHSFSETVYFDVIRKKTAALFAACTAAAAYSVGVSEEEVKLARLLGEYIGICFQIKD 212

Query: 226 DLLD 229
           D+ D
Sbjct: 213 DIFD 216


>gi|90416595|ref|ZP_01224526.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium
           HTCC2207]
 gi|90331794|gb|EAS47022.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium
           HTCC2207]
          Length = 331

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 19/196 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A          L + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 41  GGKRLRPVVVLLSALASGYQGKQHLTMAAVIEFIHTATLLHDDV--VDVSALRRGRETAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+    +++ G+ + + AF+++      + D     ++   T N+  +G +  QM +  
Sbjct: 99  NQWGNAPSVLVGDFIYSRAFQML----VDVGDMPIMGVIADAT-NLISEGEV-QQMGNAG 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN-----------EKERLRCFGENL 217
           +  IDE   + +   KT  L   A   GA++A    +             + +  +G++L
Sbjct: 153 NSAIDEATYYEVIYRKTAKLFEAAARIGAMLAAEEADLFVGDSAILDARTDAMAAYGKHL 212

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ADD++D + D
Sbjct: 213 GLAFQIADDVMDYQGD 228


>gi|154334614|ref|XP_001563554.1| farnesyl synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060575|emb|CAM42123.1| putative solanesyl-diphosphate synthase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 359

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 13/165 (7%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           L  LR+    E IH  SL+HDD+  +D+  +RRG+P +H  YD   A++AG+ +L  A  
Sbjct: 107 LPFLRLAEVTELIHTASLVHDDV--IDSSDMRRGRPALHKVYDTKRAVLAGDYILARASF 164

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            I++ +         ++++ +T    L+ ++ G++L + D   D  +       KT +L+
Sbjct: 165 YIATLQV-------PRIVILMT--TALEELMSGELLQM-DGCFDIPRYEQKSFCKTASLI 214

Query: 190 CFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
             +  S A++        E+    FG +LGI FQ+ DD LD   D
Sbjct: 215 SNSLASTAVLVDPGNEALEQTAFDFGRHLGIAFQILDDCLDITGD 259


>gi|114705279|ref|ZP_01438187.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506]
 gi|114540064|gb|EAU43184.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506]
          Length = 338

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 9/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L    A         A +++ A++E +H  +L+HDD+  +D   +RRG+ T 
Sbjct: 56  GGKRLRPMLTIASALAHGYEEGDAHVKLAASVEFMHTATLLHDDV--VDESDLRRGRRTA 113

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              +    +++ G+ LL  AF+++    +     + +  +LS    +  +G +  Q+   
Sbjct: 114 RTIWGNQASVLVGDYLLGQAFKMMVDVGS-----MAALAILSDASAVIAEGEVW-QLAAA 167

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +     E     +   KT AL   A E G ++A  S  E+E +R +G +LGI FQL DD+
Sbjct: 168 KRMTTSEADYLSVVDAKTAALFAAAAEVGPVIAGKSMREREAMRRYGRSLGISFQLIDDV 227

Query: 228 LD 229
           LD
Sbjct: 228 LD 229


>gi|153837920|ref|ZP_01990587.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810]
 gi|149748698|gb|EDM59549.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810]
          Length = 277

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 8/159 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++   
Sbjct: 23  AAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMM--- 77

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            T+L      QLM S   N+  +G +  Q+++  D    E     +   KT  L   A +
Sbjct: 78  -TELGSMKILQLM-SNAVNVIAEGEVQ-QLMNCNDPDTTEESYMQVIYSKTARLFESATQ 134

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            GAI+  A ++ +  L+ +G+ LG  FQL DD++D   D
Sbjct: 135 IGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTSD 173


>gi|145511654|ref|XP_001441749.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409010|emb|CAK74352.1| unnamed protein product [Paramecium tetraurelia]
          Length = 346

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 95/231 (41%), Gaps = 17/231 (7%)

Query: 11  ENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIR---YALL--GGKKIRSFLVTECASL 64
           ENSK  D IL     L      Q+     L  +I    Y L+  GGK+ R       A L
Sbjct: 12  ENSKSFDKILPKKFELSDPQFSQSDDVKTLSQSISDPIYDLIDRGGKRWRPAFCFLIADL 71

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F   H     V A +E IH  +L+ DD+   D+  +RR    VHI+Y    A+ A N L 
Sbjct: 72  FKRAHEELYEVAALVELIHNATLVVDDIE--DDSSVRRNDKCVHIKYGLDVAVNAANYLY 129

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVF 178
                   +      D     L +SL++   ++ +  GQ  DI       D    E Q  
Sbjct: 130 FAPLHYFLNSANYSNDQKMKMLEVSLSN---MKIVHFGQAWDIFWHKQVCDIIPTEEQYL 186

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +   KTGAL   A +   I+    +   + L  F   +GI FQ+ DD+L+
Sbjct: 187 KMASYKTGALARMAAQLSCIVLEKDEKIGKALAEFAVQIGIAFQIQDDILN 237


>gi|332524057|ref|ZP_08400309.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
 gi|332315321|gb|EGJ28306.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
          Length = 326

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCY 85
             +Q ++ D   + I+ A  GGK +R    FL T        +     ++ A++E +H  
Sbjct: 24  KRVQVRNTDIQEAIIQLAQAGGKYLRPAFFFLFTSFGPKEKQDSEQLTKIAASLEILHMA 83

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           +LIHDD+  +D+  +RRG+ TV  Q+ +  A+  G+ L T  FE+I        + ++  
Sbjct: 84  TLIHDDV--IDDSPLRRGQVTVQTQFGKDIAVYTGDFLFTIFFELIL-------ETMQDS 134

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHA 202
             +S+     ++ +L G++  +   F  E  +    +    KT  L   A   GA    A
Sbjct: 135 PYMSINAK-AMKKILVGELDQMHLYFNQEQSIRDYLRSISGKTAELFRLASLEGAYFGGA 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           S +   +    G ++G+ FQ+ DD+LD    E+D  K
Sbjct: 194 SPDVVSKAGRIGYHIGMTFQILDDILDYTAKEKDFNK 230


>gi|33862665|ref|NP_894225.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9313]
 gi|33634581|emb|CAE20567.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9313]
          Length = 323

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   +   + +  L+A   R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLISRALSADGDLSARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVA 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLAVVKLLSRVIMDLADGEVKQGLYR---- 157

Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                  D  Q F   ++K   KT +LM  + ++  +++  S   ++ L  FG  LG+ F
Sbjct: 158 ------YDTGQSFATYLEKSYCKTASLMANSVQAAGVLSGESVEHQKLLHHFGRQLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QVVDDILD 219


>gi|22299300|ref|NP_682547.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1]
 gi|22295483|dbj|BAC09309.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1]
          Length = 323

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL HDD+  +D   +RRG PTV+  +    AI AG+ L   A   ++ 
Sbjct: 72  RLAEITEMIHTASLFHDDV--VDQAQLRRGVPTVNSVFGNRVAIQAGDFLFAQASWYLAD 129

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 DN++   +LS       +G +  Q  +  D  I      +    KT +L+  + 
Sbjct: 130 -----LDNLQVVKLLSQVIKDFAEGEIR-QGFNRFDTSITLDDYLLKTYYKTASLIANSA 183

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++ A+++ A     E +  +G+NLG+ FQ+ DD+LD
Sbjct: 184 KAAAVLSEAPPETIEAMYTYGKNLGLAFQIVDDILD 219


>gi|295394724|ref|ZP_06804939.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972320|gb|EFG48180.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 354

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 36/216 (16%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L   IR   +GGK+IR+        L    H     + A++E +H  +LIHDD+  +DN 
Sbjct: 39  LTDPIRAFCVGGKRIRALATWWGYQLAGGTHPGIAHMAASVELLHAAALIHDDI--IDNS 96

Query: 99  YIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKD-N 141
            +RRG P+ H  + ++                 AIIAG+  L  + ++ ++    + D N
Sbjct: 97  DMRRGNPSTHAFFSQMHGSAGFEGDARSFGINAAIIAGDVCLGLSEQLFNASGLNVTDPN 156

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ--------DEFIDET-QVFMIQKMKTGALMCFA 192
           +R+      TH+   + ++ GQ LDI+         + +D   +V   +  K      F 
Sbjct: 157 VRA------THDAFRRDVMMGQYLDIRIQAAPVPDSQIVDRAMEVLTYKSAKYSVEQPF- 209

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E GA +A A       L  F   LG  FQL DD L
Sbjct: 210 -ELGARLAGAKPQFVHDLSAFTLPLGQAFQLRDDEL 244


>gi|29165656|gb|AAH49211.1| PDSS1 protein [Homo sapiens]
          Length = 414

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 132 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 189

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 190 GKHTVNKIWGEKKAVLAGDLILSAASIALA--------RIGNTTVISILTQV-IEDLVRG 240

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 241 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 300

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 301 AFQLIDDVLD 310


>gi|57167586|ref|ZP_00366726.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228]
 gi|57020708|gb|EAL57372.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228]
          Length = 275

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 26/190 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GKK+RS L+   A      +  + ++ AAIE IH  SL+HDD+  +D   +RRG  +V+
Sbjct: 7   SGKKLRSKLLLAIAG----ENANSYKICAAIELIHLASLLHDDI--IDESKLRRGAKSVN 60

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L + AF  +S        +I S  ++ L           G+++D+ 
Sbjct: 61  AEFGTKNALMLGDILYSKAFYELSQLDACFA-SIISDAVVKLAV---------GELMDV- 109

Query: 169 DEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            EF      D+ +   +   KT  L+  +   GAI+A+  +   +    +G+NLG+ FQ+
Sbjct: 110 -EFSKSFNADKDKYLKMIYNKTAVLIEASARCGAILANLDE---KAFGEYGKNLGLAFQM 165

Query: 224 ADDLLDCEED 233
            DD+LD + D
Sbjct: 166 IDDILDIKGD 175


>gi|321470028|gb|EFX81006.1| hypothetical protein DAPPUDRAFT_303672 [Daphnia pulex]
          Length = 393

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 22/191 (11%)

Query: 50  GKKIRSFLVTEC---ASLFNVNHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYI 100
           GK IR  ++T C   A  F+++  T        ++    E IH  SL+HDD+  +D    
Sbjct: 110 GKAIRP-VITMCMARAINFHLDQNTPYVLQKQKKIAQIAEMIHTASLVHDDV--IDVADS 166

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RR +P+V+I + +  +IIAG+ +L  A ++++  + +    + SQ++  L     +Q  L
Sbjct: 167 RRSRPSVNIVWGQRKSIIAGDFILAMASKMLARLQNKQVIILLSQVLADLVQGEFMQ--L 224

Query: 161 GGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           G +      E  DE      +K   KT +L+ ++C++ ++++ A    +     +G  +G
Sbjct: 225 GAR------ENKDERFAHYSEKTFKKTASLIAYSCQAVSVLSGADSTLQAVAFQYGRQIG 278

Query: 219 IIFQLADDLLD 229
           + FQL DDLLD
Sbjct: 279 MAFQLVDDLLD 289


>gi|114629763|ref|XP_507706.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Pan
           troglodytes]
          Length = 415

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 190

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALA--------RIGNTTVISILTQV-IEDLVRG 241

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 242 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 301

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 302 AFQLIDDVLD 311


>gi|109088459|ref|XP_001102166.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 isoform 1
           [Macaca mulatta]
          Length = 415

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 190

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 248

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 249 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 302

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 303 FQLIDDVLD 311


>gi|50659086|ref|NP_055132.2| decaprenyl-diphosphate synthase subunit 1 [Homo sapiens]
 gi|74744657|sp|Q5T2R2|DPS1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           1; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 1; AltName: Full=Trans-prenyltransferase 1;
           Short=TPT 1
 gi|55959523|emb|CAI17280.1| trans-prenyltransferase (TPT) [Homo sapiens]
 gi|81157931|dbj|BAE48216.1| subunit 1 of decaprenyl diphosphate synthase [Homo sapiens]
 gi|119606490|gb|EAW86084.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_a
           [Homo sapiens]
          Length = 415

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 190

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 248

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 249 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 302

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 303 FQLIDDVLD 311


>gi|254556045|ref|YP_003062462.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum JDM1]
 gi|254044972|gb|ACT61765.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum JDM1]
          Length = 330

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 18/201 (8%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ND +L  I     GGK +R       +     +    + + A++E +H  +LIHDD+  +
Sbjct: 40  NDAILEMIHG---GGKLLRPAYCLLFSQFTTTDRQRMVALAASLETLHTATLIHDDI--V 94

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154
           D+  +RR   T+  ++ + TA+ AG+ L    F+I++   +  K         S+  N  
Sbjct: 95  DDAALRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSSSFK---------SIQMNSE 145

Query: 155 GLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLR 211
            ++ +L G++      + +D T    +Q++  KT  L   +C  GA  +  S +  +R R
Sbjct: 146 NMEKILVGEVQQKNRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESGQSSHFAQRAR 205

Query: 212 CFGENLGIIFQLADDLLDCEE 232
             G  +G+ FQ+ DD+LD +E
Sbjct: 206 KAGLAIGMAFQILDDILDYQE 226


>gi|15828220|ref|NP_302483.1| polyprenyl diphosphate synthase component [Mycobacterium leprae TN]
 gi|221230697|ref|YP_002504113.1| polyprenyl diphosphate synthase component [Mycobacterium leprae
           Br4923]
 gi|13093913|emb|CAC31793.1| polyprenyl diphosphate synthase component [Mycobacterium leprae]
 gi|219933804|emb|CAR72375.1| polyprenyl diphosphate synthase component [Mycobacterium leprae
           Br4923]
          Length = 330

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 27/231 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + +Q+   RI+ ++D  L  T   + T+    L +A      GGK+ R       
Sbjct: 10  DAAFAATVQDRVVRIEQLMDAELRDT-DEVMTESVLHLFAA------GGKRFRPLFTVLS 62

Query: 62  ASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +    +    +  GA IE +H  SL HDD+  MD   +RRG P+ ++++    AI+AG
Sbjct: 63  AQIGPRPDAPEVIIAGAVIELVHLASLYHDDV--MDEAEVRRGAPSANLRWSNSVAILAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQ--DEFIDETQ 176
           + L   A  ++S            QL L     I      ++ GQM + +   E  D  +
Sbjct: 121 DYLFATASRLVS------------QLGLDAVRIIADTFAQLVTGQMRETRGVPEGADSIE 168

Query: 177 VFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++ +   KTG L+  A   G + A A   + ERL   G  +G  FQ++DD
Sbjct: 169 QYLKVVYEKTGCLIGSAGRLGGLFAGAHAEQVERLSRLGSIVGTAFQISDD 219


>gi|195452852|ref|XP_002073528.1| GK13098 [Drosophila willistoni]
 gi|194169613|gb|EDW84514.1| GK13098 [Drosophila willistoni]
          Length = 449

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++   
Sbjct: 204 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDV 261

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + S+++  L     +Q  LG +      E  +E     + K   KT +L+  A ++ A
Sbjct: 262 TIVLSKILTDLVQGEFMQ--LGSR------ETENERFAHYLTKTYRKTASLIANALKATA 313

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A A  N  E    +G N+G+ FQL DD+LD
Sbjct: 314 VIAQADDNVAELAFQYGRNIGLAFQLVDDMLD 345


>gi|119719035|ref|YP_919530.1| polyprenyl synthetase [Thermofilum pendens Hrk 5]
 gi|119524155|gb|ABL77527.1| Polyprenyl synthetase [Thermofilum pendens Hrk 5]
          Length = 302

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 17/190 (8%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           YAL GGK +R  L    AS+F       L +  A+E +H  SL+HDD+   D    RRG+
Sbjct: 39  YALFGGKMLRGTLSLLVASMFTAQVEKVLPIALAVELMHAASLVHDDIA--DASPTRRGR 96

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           P+   +Y    AI   + L+  A  +++    + +K+++ +    +L           GQ
Sbjct: 97  PSFWSKYGLEDAITVPHVLMPVAISLVADAGVEAVKESMNAWRRSAL-----------GQ 145

Query: 164 MLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           + D +     E  V    + + KT A+   +C +  ++A   ++  E  R +G   G+++
Sbjct: 146 LWDTRILRGREVPVGYEKLIEYKTAAVFEASC-TLPLIAIGRRDIVESGRVYGRFFGLLY 204

Query: 222 QLADDLLDCE 231
           Q+ DD  D E
Sbjct: 205 QVLDDFSDAE 214


>gi|151946397|gb|EDN64619.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190408825|gb|EDV12090.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae
           RM11-1a]
 gi|256273178|gb|EEU08127.1| Coq1p [Saccharomyces cerevisiae JAY291]
 gi|259144849|emb|CAY77788.1| Coq1p [Saccharomyces cerevisiae EC1118]
 gi|323334502|gb|EGA75876.1| Coq1p [Saccharomyces cerevisiae AWRI796]
 gi|323338819|gb|EGA80034.1| Coq1p [Saccharomyces cerevisiae Vin13]
 gi|323349821|gb|EGA84035.1| Coq1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 473

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 42/195 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISR 234

Query: 133 --SPKT-----------------QLKDN-----------------IRSQLMLSLTHNIGL 156
             +P+                  QLK+                  + S+ +    H+  +
Sbjct: 235 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 294

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                G  L   D+ I+    + I K  +KT AL+  +C   AI++ AS    +    FG
Sbjct: 295 PSRQQGLQLS-HDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFG 353

Query: 215 ENLGIIFQLADDLLD 229
            NLGI FQL DD+LD
Sbjct: 354 RNLGICFQLVDDMLD 368


>gi|28377861|ref|NP_784753.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum WCFS1]
 gi|300767848|ref|ZP_07077758.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308180038|ref|YP_003924166.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270694|emb|CAD63600.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum WCFS1]
 gi|300494833|gb|EFK29991.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308045529|gb|ADN98072.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 330

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 18/201 (8%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ND +L  I     GGK +R       +     +    + + A++E +H  +LIHDD+  +
Sbjct: 40  NDAILEMIHG---GGKLLRPAYCLLFSQFTTTDRQRMVALAASLETLHTATLIHDDI--V 94

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI- 154
           D+  +RR   T+  ++ + TA+ AG+ L    F+I++   +  K         S+  N  
Sbjct: 95  DDAALRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSSSFK---------SIQMNSE 145

Query: 155 GLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLR 211
            ++ +L G++      + +D T    +Q++  KT  L   +C  GA  +  S +  +R R
Sbjct: 146 NMEKILVGEVQQKDRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESGQSSHFAQRAR 205

Query: 212 CFGENLGIIFQLADDLLDCEE 232
             G  +G+ FQ+ DD+LD +E
Sbjct: 206 KAGLAIGMAFQILDDILDYQE 226


>gi|322490435|emb|CBZ25694.1| putative polyprenyl synthase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 742

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 23/196 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK  RS +   C +  +  +    R  A  E +H  SLI DD+   DN  +RRG   VH
Sbjct: 446 GGKSWRSLIFVSCCNALSRQYFDCSRYIAVAELLHVGSLIIDDI--QDNSVVRRGGKCVH 503

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
           ++Y   TAI AG+      F    + + Q     ++  +  L  ++ L G   GQ LDI 
Sbjct: 504 VEYGVATAINAGSACY---FMGPRAARIQDLPPEKASRIYKLYFDVLLAGH-AGQGLDIY 559

Query: 168 --------------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
                             +D      I   KTGA +   C    ++        E +  F
Sbjct: 560 RLDYLMPKVVETGDTSTLVDALDA--IHTYKTGAAVGALCSMACVLCETPTVLSEAMERF 617

Query: 214 GENLGIIFQLADDLLD 229
           G  LG+ FQ+ DD L+
Sbjct: 618 GLTLGLAFQIVDDALN 633


>gi|152964618|ref|YP_001360402.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
 gi|151359135|gb|ABS02138.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
          Length = 344

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 18/192 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  L    A L           L     +E  H  SL HDD+  MD+   RRG  
Sbjct: 58  GGKRVRPMLTLLGAHLAGSAPEVPSAVLDAAVVVELTHLASLYHDDV--MDSAPTRRGAA 115

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS--PKT-QLKDNIRSQLMLSLTHNIGLQGMLGG 162
              + Y    AI+ G+ L   A  +++   P+  +L+     +L L   H     G   G
Sbjct: 116 AAQLVYGNNVAILTGDLLFARASNVVAGLGPEAVRLQAETFERLCLGQLHET--VGPKPG 173

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +  D  + ++D      +   KT +L+  A   GA+ A  S      +  +GE++G+ FQ
Sbjct: 174 E--DPVEHYLD------VLSDKTASLIATAGRFGAMFAGGSGETVTAMVRYGEDVGVAFQ 225

Query: 223 LADDLLDCEEDL 234
           LADD+LD   D+
Sbjct: 226 LADDVLDLTSDV 237


>gi|325970901|ref|YP_004247092.1| trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy]
 gi|324026139|gb|ADY12898.1| Trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy]
          Length = 328

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+RVG+ +E IH  SL+HDD+  +D+   RRGK TV  +     A++AG+ LL  A  + 
Sbjct: 68  AIRVGSILELIHLASLVHDDI--IDSAAKRRGKSTVFAKVGAKQAVLAGDFLLAKALMLT 125

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S  +  +   + S+ +  L  +   Q    G      D FI           KT +L   
Sbjct: 126 SGKERGMDSRVVSRALSRLCESELEQDAGQG------DFFISHHTYLRRIAGKTASLFAL 179

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +C +G  +  +    +      G  +G+ FQ+ DD+LD
Sbjct: 180 SCYAGVALQESEPTRQMLCHRIGYCMGMAFQIQDDILD 217


>gi|307719658|ref|YP_003875190.1| heptaprenyl diphosphate synthase component II [Spirochaeta
           thermophila DSM 6192]
 gi|306533383|gb|ADN02917.1| heptaprenyl diphosphate synthase component II [Spirochaeta
           thermophila DSM 6192]
          Length = 327

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 19/165 (11%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R+ AA+E +H  +L+HDD+  +D+   RRG   +H  Y    A++ G+ L   A E+++
Sbjct: 69  VRLAAALEMLHMATLVHDDI--VDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVA 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-------DEFIDETQVFMIQKMKT 185
              +  +D+       ++  + G++ +L G++ +++       D F    +       KT
Sbjct: 127 EYAS--RDH-------AVFLSRGVRHILDGEIEEVEVRRALGRDAF-SLRRYLRRILRKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           G L   A   GA  A A +    RLR  G N+G+ FQ+ DD+LD 
Sbjct: 177 GLLFVVAFHLGASEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDV 221


>gi|301784328|ref|XP_002927569.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
           [Ailuropoda melanoleuca]
          Length = 467

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 22/199 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 185 GKAFRPIIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 242

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 243 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTAVISILTQVIEDLVRGEFLQ--LGS 300

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 301 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 354

Query: 221 FQLADDLLD---CEEDLPK 236
           FQL DD+LD   C +++ K
Sbjct: 355 FQLIDDVLDFTSCSDEMGK 373


>gi|33861175|ref|NP_892736.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|33639907|emb|CAE19077.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
          Length = 323

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 19/188 (10%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L+++  S          R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLISKAISQDFTLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++      DN++   +LS      +  +  G++ 
Sbjct: 102 TVHSRFNTRVAVLAGDFLFAQASWHLANL-----DNVKVVKLLSRV----IMDLAEGEIK 152

Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              + F D  Q F   I K   KT +L+  + ++  ++ +   ++   L  FG+N+G+ F
Sbjct: 153 QNLNRF-DSAQTFSKYINKSYCKTASLIANSTKAAGVLCNLEDDKLNHLYEFGKNIGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QVVDDILD 219


>gi|262190890|ref|ZP_06049107.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae CT 5369-93]
 gi|262033217|gb|EEY51738.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae CT 5369-93]
          Length = 274

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 11/167 (6%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +H TA    A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T 
Sbjct: 15  AHHTTA---AAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTR 69

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F+++    T+L  +++   ++S   N+  +G +  Q+++  D    E     +   KT 
Sbjct: 70  SFQMM----TELG-SMKILKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTA 123

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++D   D
Sbjct: 124 RLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 170


>gi|326776680|ref|ZP_08235945.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
 gi|326657013|gb|EGE41859.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
          Length = 347

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   AS    +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 62  GKAIRPALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            +    AII G+ +L  A  +++           ++L   +        +  GQ  D   
Sbjct: 120 VFGIPDAIITGDAMLALAQRLLAEDPHPAAARAVARLSSCIIE------LCAGQQADCAF 173

Query: 169 ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                E I   +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 174 EERGPEEITLDECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLI 233

Query: 225 DDLL 228
           DDL+
Sbjct: 234 DDLI 237


>gi|291570889|dbj|BAI93161.1| solanesyl diphosphate synthase [Arthrospira platensis NIES-39]
          Length = 323

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D   +RRG PTVH  ++   A++AG+ L   +   +++
Sbjct: 72  RLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYLAN 129

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   + SQ+++ L      QG      L+  D  +           KT +L+  + 
Sbjct: 130 LDNLEVVKLLSQVIMDLAEGEIQQG------LNRFDTSLSIEAYLEKSYYKTASLIANSS 183

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++  +++  S    E L  +G N+G+ FQ+ DD+LD
Sbjct: 184 KAAGLLSGVSAELAEDLYKYGRNIGLAFQIVDDILD 219


>gi|194477144|ref|YP_002049323.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Paulinella chromatophora]
 gi|171192151|gb|ACB43113.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Paulinella chromatophora]
          Length = 323

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 19/226 (8%)

Query: 9   LQENSKRIDTILDDLL-LQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECA-SLF 65
           LQ     ++T+L DL  L  A H   Q   + L SA      GGK+IR  +V   + +L 
Sbjct: 8   LQPVESDLETLLSDLRNLIGADHPILQAAAEHLFSA------GGKRIRPGIVLLLSRALS 61

Query: 66  NVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               L+    R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PTGDLSPRHRRLAEITEMIHTASLVHDDV--VDEAATRRGVATVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         + +I+++        
Sbjct: 120 FAQASWHLANLDNLEVVKLLSRVIMDLADGEVKQGLFRYNTRQSFETYIEKSYC------ 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +  +  ++A  ++    +L  FG  LG+ FQ+ DD+LD
Sbjct: 174 KTASLIANSARAAGVLADLNEEHLVQLYRFGRQLGLAFQVVDDILD 219


>gi|291279049|ref|YP_003495884.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1]
 gi|290753751|dbj|BAI80128.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1]
          Length = 327

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   +   + L       ++ +   +E IH  +L+HDD+  +D    RRGK   +
Sbjct: 46  GGKRLRPVFLILSSKLSGYEGNRSIVISGVVEYIHTATLLHDDV--IDGAMYRRGKKAAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +     ++ G+ L + AF  +      +KD +   Q++L+       +G +  Q++  
Sbjct: 104 RVFGNDITVLCGDFLYSRAFVNL------VKDGDPEVQMILANAAKTMSEGEVF-QLVKT 156

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  +       I   KT  L    CE GA+++ + ++++E LR +G  +G+ FQ++DD+
Sbjct: 157 ANFDLTMEDYLKIIFSKTAILFSSCCEIGAVLSKSDKDKRENLREYGRLIGLAFQMSDDI 216

Query: 228 LD 229
           LD
Sbjct: 217 LD 218


>gi|254777239|ref|ZP_05218755.1| GAF domain-containing protein [Mycobacterium avium subsp. avium ATCC
            25291]
          Length = 1804

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 24/202 (11%)

Query: 45   YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y L GGK +R  L +  C  L    HL A L   A +E  H   LIHDD+   D  + RR
Sbjct: 1464 YPLRGGKALRPALSIATCLGLGG--HLEAILPTAATLELYHNAFLIHDDIE--DESWWRR 1519

Query: 103  GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGM-- 159
            GKPT+HI +    A+  G+ +L+ + +        L DN+ R  L  +L     +  M  
Sbjct: 1520 GKPTLHIDHGVPVAVNVGDAMLSLSLQ-------PLLDNVERVGLGPALRILRAVATMTR 1572

Query: 160  --LGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFA-CESGAIMAHASQNEKERLR 211
              + GQ L++         +D+     + ++KT         ++GA+ A A+ +    L 
Sbjct: 1573 KTVDGQALELDWVHSNTWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGATPDRMAPLE 1632

Query: 212  CFGENLGIIFQLADDLLDCEED 233
              G +LG  FQ+ DDLL+   D
Sbjct: 1633 SLGRHLGAAFQITDDLLNLRAD 1654


>gi|149197624|ref|ZP_01874674.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa
           HTCC2155]
 gi|149139194|gb|EDM27597.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa
           HTCC2155]
          Length = 360

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 55/224 (24%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK++R  L    A+L +     A  V +A E  H ++L+HDD+  +D    RRG 
Sbjct: 42  YTKNGGKRLRPALCLWSAALVSDCPELATSVASAAEIFHTWTLVHDDI--IDRDATRRGL 99

Query: 105 PTVHIQYDEVT------------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           PT H    +                    AI+ G+    +A  ++S    Q   ++ S  
Sbjct: 100 PTSHTALADFARKEHGSEGDNADHFGLSMAILTGDLQQAWALRLVSE---QANKDLTSGT 156

Query: 147 MLS-----LTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKTGALMCFACESG 196
            L+     L+H   +  +LGG+ +D++ E      I   ++  + +MKT  L+ F+ ++G
Sbjct: 157 ALAVMDRLLSHVYPV--LLGGEAIDVEFEHREIDSISPEEILKMLEMKTACLLEFSAQAG 214

Query: 197 AIMA------------HASQNEKERLRCFGENLGIIFQLADDLL 228
            ++             HA Q        F  N G+ FQL DD+L
Sbjct: 215 VVVGLELDSFDHDLVHHAGQ--------FAYNAGLAFQLQDDIL 250


>gi|124008499|ref|ZP_01693192.1| polyprenyl synthetase [Microscilla marina ATCC 23134]
 gi|123986007|gb|EAY25857.1| polyprenyl synthetase [Microscilla marina ATCC 23134]
          Length = 324

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 12/182 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V   A      +  A R  A IE +H  +L+HDD+  +D+   RRG  +++ 
Sbjct: 46  GKQMRPMFVFLSAGTGGEINEMAYRGAALIELLHTATLVHDDV--VDDSNYRRGFFSINA 103

Query: 110 QYDEVTAIIAGNGLLTYAF--EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            +    A++ G+ LL+      I +    QLK  I S  +  ++    LQ +   + LDI
Sbjct: 104 LWKNKIAVLVGDYLLSRGLLLSIDNEDFEQLK--IVSNAVREMSEGELLQ-IAKARRLDI 160

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +E       + I + KT +L+   C  GA  A  ++ +    R FGE +G+ FQ+ DDL
Sbjct: 161 TEEV-----YYDIIRQKTASLIASCCAVGASAAGLNKEQISMFREFGEKVGMAFQIKDDL 215

Query: 228 LD 229
            D
Sbjct: 216 FD 217


>gi|256082061|ref|XP_002577281.1| prenyl transferase; trans-prenyltransferase [Schistosoma mansoni]
 gi|238662587|emb|CAZ33518.1| prenyl transferase [Schistosoma mansoni]
          Length = 409

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 17/160 (10%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SLIHDDL  +D+  +RRGK + +  +    A++ G+ +LT++  +++       
Sbjct: 161 EMIHTASLIHDDL--IDSAAVRRGKTSAYKAFGHREAVLGGDFILTHSSRLLAQIGDTGV 218

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI----QKMKTGALMCFACES 195
             + SQ++  L H         G+M+ +     D+ + F         KT +L+  +C++
Sbjct: 219 IAVLSQVIEDLIH---------GEMMQLAPNSDDDDKRFQTYLTKTYRKTASLIANSCKA 269

Query: 196 GAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A++     SQ   + +  FGE+LG+ FQL DD+LD   D
Sbjct: 270 VAMLTVPTLSQWHIDNMYEFGEHLGMAFQLIDDVLDFVTD 309


>gi|6319475|ref|NP_009557.1| Coq1p [Saccharomyces cerevisiae S288c]
 gi|116929|sp|P18900|COQ1_YEAST RecName: Full=Hexaprenyl pyrophosphate synthase, mitochondrial;
           Short=HPS; Flags: Precursor
 gi|171704|gb|AAA34686.1| hexaprenyl pyrophosphate synthetase (COQ1) [Saccharomyces
           cerevisiae]
 gi|536190|emb|CAA84939.1| COQ1 [Saccharomyces cerevisiae]
 gi|45270088|gb|AAS56425.1| YBR003W [Saccharomyces cerevisiae]
 gi|285810339|tpg|DAA07124.1| TPA: Coq1p [Saccharomyces cerevisiae S288c]
 gi|323310186|gb|EGA63378.1| Coq1p [Saccharomyces cerevisiae FostersO]
          Length = 473

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 42/195 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSISR 234

Query: 133 --SPKT-----------------QLKDN-----------------IRSQLMLSLTHNIGL 156
             +P+                  QLK+                  + S+ +    H+  +
Sbjct: 235 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 294

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                G  L   D+ I+    + I K  +KT AL+  +C   AI++ AS    +    FG
Sbjct: 295 PSRQQGLQLS-HDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFG 353

Query: 215 ENLGIIFQLADDLLD 229
            NLGI FQL DD+LD
Sbjct: 354 RNLGICFQLVDDMLD 368


>gi|14625006|dbj|BAB61883.1| farnesyl diphosphate synthase [Rhodovulum strictum]
          Length = 110

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH+++DE TA++ G+ L T AFE+++ P       +R  L+ +L    G+ GM
Sbjct: 12  LRRGLPTVHLKWDEGTALLVGDALQTLAFEMLADPACHPDPAVRIDLVAALARASGIDGM 71

Query: 160 LGGQMLDIQDE----FIDETQVFMIQKMKTGAL 188
           + GQ  DI  E     +   ++  +   KTGAL
Sbjct: 72  VLGQAQDISVETDGRALSLAEITELHANKTGAL 104


>gi|158604961|gb|ABW74777.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter concisus 13826]
          Length = 297

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 92/168 (54%), Gaps = 24/168 (14%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-FEI 130
           +L++ A IE IH  SL+HDD+  +D   IRRGKP+++  +    +++ G+ L + A FE+
Sbjct: 48  SLKLCAIIELIHLASLLHDDV--IDEANIRRGKPSINALFGSKNSVMLGDILYSKAYFEL 105

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM---KT 185
                T+   +I + +  +++       +  G+M+D++  + F +  Q ++  KM   KT
Sbjct: 106 -----TKFDPSIAAVISDAVSK------LSIGEMMDVKMAENFNENEQEYL--KMIYYKT 152

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L+      GA +A     + E+   +G+NLG+ FQ+ DD+LD  +D
Sbjct: 153 AVLIEATAICGAKLAG---KDSEKFGLYGKNLGLAFQIVDDILDITQD 197


>gi|223040963|ref|ZP_03611224.1| prenyl transferase [Campylobacter rectus RM3267]
 gi|222877760|gb|EEF12880.1| prenyl transferase [Campylobacter rectus RM3267]
          Length = 297

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 28/170 (16%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           +L++ A IE IH  SL+HDD+  +D+   RRG P+++  +    A++ G+ L +  F  +
Sbjct: 48  SLKICAIIELIHLASLLHDDV--IDDAGTRRGSPSINASFGAKNAVMLGDILYSKGFYEL 105

Query: 132 SSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQ-----DEFID--ETQVFMIQKM 183
           S    ++   I   +  LS+           G+M+D++     +E I   ET ++     
Sbjct: 106 SKFPHEIAGEISGAVSKLSV-----------GEMMDVELSAKFNENIAAYETMIYY---- 150

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT  L+  A   GA++      E    + +G+NLG+ FQ+ DD+LD  +D
Sbjct: 151 KTAVLIEAAAAVGAMLVGL---ETRNFKIYGKNLGLAFQIIDDILDVTQD 197


>gi|305433092|ref|ZP_07402248.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20]
 gi|304443793|gb|EFM36450.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20]
          Length = 297

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 22/188 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GKK+RS L+   A      +  + ++ AAIE IH  SL+HDD+  +D   +RRG  +V+
Sbjct: 29  SGKKLRSKLLLAIAG----ENANSYKICAAIELIHLASLLHDDI--IDESKLRRGAKSVN 82

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++ G+ L + AF  +S        +I S  ++ L           G+++D++
Sbjct: 83  AEFGTKNALMLGDILYSKAFYELSQLDACFA-SIISDAVVKLAV---------GELMDVE 132

Query: 169 --DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               F  D+ +   +   KT  L+  +   GAI+A+  +   +    +G+NLG+ FQ+ D
Sbjct: 133 LSKSFNADKDKYLKMIYNKTAVLIEASARCGAILANLDE---KAFGEYGKNLGLAFQMID 189

Query: 226 DLLDCEED 233
           D+LD + D
Sbjct: 190 DILDIKGD 197


>gi|182436056|ref|YP_001823775.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178464572|dbj|BAG19092.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 347

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   AS    +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 62  GKAIRPALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AII G+ +L  A  +++           ++L   +        +  GQ  D   
Sbjct: 120 VFGIPDAIITGDAMLALAQRLLAEDPHPAAARAVARLSSCIIE------LCAGQQADCAF 173

Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E     +V +     +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 174 EERGPEEVTLDECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLI 233

Query: 225 DDLL 228
           DDL+
Sbjct: 234 DDLI 237


>gi|73948851|ref|XP_849908.1| PREDICTED: similar to trans-prenyltransferase [Canis familiaris]
          Length = 365

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 83  GKAFRPIIVVLMARACNIHHSNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 140

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 141 GKHTVNKIWGEKKAVLAGDLILSAASMALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 198

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 199 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 252

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 253 FQLIDDVLD 261


>gi|298710752|emb|CBJ32173.1| geranylgeranyl pyrophosphate synthase, chloroplast precursor
           [Ectocarpus siliculosus]
          Length = 254

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 1/90 (1%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           ++I Y+L+ GGK++R  L      +F  +   A+    + E IH  SLIHDDLP+MD+  
Sbjct: 143 ASIHYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDD 202

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           +RRG PT H++Y E  AI+AG+ LL+ +FE
Sbjct: 203 LRRGMPTCHVKYGEDIAILAGDALLSKSFE 232


>gi|172039945|ref|YP_001799659.1| putative polyprenyl diphosphate synthase [Corynebacterium
           urealyticum DSM 7109]
 gi|171851249|emb|CAQ04225.1| putative polyprenyl diphosphate synthase [Corynebacterium
           urealyticum DSM 7109]
          Length = 336

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPSMDNGYIRR 102
           AL GGK+ R       A+ +  N  TA +V  A   +E  H  +L HDD+  MD    RR
Sbjct: 53  ALAGGKRFRVVFAL-LAAQYGKNP-TARKVRDAAVVVELTHLATLYHDDV--MDEADRRR 108

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  + + ++    AI+AG+ L   A EI+S         + +  +       G   ++ G
Sbjct: 109 GAESANARWGNSMAILAGDYLFAVASEILS--------GLGAHTVRHFADTFG--ELVTG 158

Query: 163 QMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           QM +       E  +    K+   KTG L+  A   GA+ + A Q   + L  FG ++G 
Sbjct: 159 QMRETVGAADGEDAIEHYMKVIQEKTGVLIASAGYLGALHSGAEQEHVDALAQFGRHMGQ 218

Query: 220 IFQLADDLLDCEED 233
           IFQ+ DD++D   D
Sbjct: 219 IFQIVDDIIDIWAD 232


>gi|254394001|ref|ZP_05009090.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294810895|ref|ZP_06769538.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326439472|ref|ZP_08214206.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197707577|gb|EDY53389.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294323494|gb|EFG05137.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 368

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 36/210 (17%)

Query: 45  YALLGGKKIRSFLVTECASLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R  L   CA  +       +    +RVGAA+E  H ++L+HDDL  MD   
Sbjct: 58  FVLRGGKRLRPLL---CACGWYAAGGTGDPTAVVRVGAALELFHAFALVHDDL--MDRSA 112

Query: 100 IRRGKPTVH--------IQYDEVT--------AIIAGNGLLTYAFEII-SSPKTQLKDNI 142
            RRG+P VH           D  T        AI+ G+    ++ E++ ++P T  + + 
Sbjct: 113 TRRGRPAVHRALADRYRSTRDHATAERLGVGSAILLGDLACVWSCELLHTAPLTPRQFSA 172

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC-FACESGAI 198
               +L + H +  + M  GQ LD+    +   D      + + KT    C     +GA 
Sbjct: 173 ----LLPVVHAMRTEVMY-GQYLDLLATGEPTADVRGPLRVARYKTATYTCERPLHAGAA 227

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +A   +   +    +   LG  FQL DDLL
Sbjct: 228 LAGGPEAVLDACTAYALPLGEAFQLRDDLL 257


>gi|323356280|gb|EGA88084.1| Coq1p [Saccharomyces cerevisiae VL3]
          Length = 371

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 42/195 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 75  RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISR 132

Query: 133 --SPKT-----------------QLKDN-----------------IRSQLMLSLTHNIGL 156
             +P+                  QLK+                  + S+ +    H+  +
Sbjct: 133 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 192

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                G  L   D+ I+    + I K  +KT AL+  +C   AI++ AS    +    FG
Sbjct: 193 PSRQQGLQLS-HDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFG 251

Query: 215 ENLGIIFQLADDLLD 229
            NLGI FQL DD+LD
Sbjct: 252 RNLGICFQLVDDMLD 266


>gi|126341457|ref|XP_001376077.1| PREDICTED: similar to PDSS1 protein [Monodelphis domestica]
          Length = 412

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 24/200 (12%)

Query: 50  GKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   NV+H        +   +    E IH  SL+HDD+  +D+   RR
Sbjct: 130 GKAFRPIVVVLMARACNVHHNNCRDMQASQRSIALIAEMIHTASLVHDDI--IDDASSRR 187

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 188 GKHTVNQIWGEKKAVLAGDFILSAASVALA--------RIGNTTIVSVLTQV-IEDLVRG 238

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     I+K   KT +L+  +C++ +I+        E    +G+N+GI
Sbjct: 239 EFLQLGSKENENERFAHYIEKTFKKTASLLANSCKAVSILGCPDPVVHEIAYQYGKNIGI 298

Query: 220 IFQLADDLLD---CEEDLPK 236
            FQL DD+LD   C + L K
Sbjct: 299 AFQLIDDVLDFTSCTDQLGK 318


>gi|281342287|gb|EFB17871.1| hypothetical protein PANDA_017357 [Ailuropoda melanoleuca]
          Length = 363

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 22/199 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 81  GKAFRPIIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 138

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 139 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTAVISILTQVIEDLVRGEFLQ--LGS 196

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 197 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 250

Query: 221 FQLADDLLD---CEEDLPK 236
           FQL DD+LD   C +++ K
Sbjct: 251 FQLIDDVLDFTSCSDEMGK 269


>gi|116753666|ref|YP_842784.1| polyprenyl synthetase [Methanosaeta thermophila PT]
 gi|116665117|gb|ABK14144.1| Polyprenyl synthetase [Methanosaeta thermophila PT]
          Length = 289

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 20/189 (10%)

Query: 43  IRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           I Y L+  GK++R  ++   +  F  +   AL    A+E  H  SLIHDD+  +D G  R
Sbjct: 31  IEYVLMSPGKRVRPLILLFSSEAFGCDPRYALNAALAVELAHAASLIHDDI--LDCGVER 88

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQG 158
           RG P+   ++    +++AG+ L++ +  +ISS   P  +L              +     
Sbjct: 89  RGAPSAFRRFGMEASLLAGDYLISMSIGLISSYGEPAIRL-------------FSKACMD 135

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           M  G+++D+        + +     KT +L   +   G ++A A + ++     +G  LG
Sbjct: 136 MAEGEIIDLS-RIASPQEYYQCITKKTASLFAASARLGCMIAGADREDQILYERYGLELG 194

Query: 219 IIFQLADDL 227
           + +Q+ DDL
Sbjct: 195 LAYQIVDDL 203


>gi|159041083|ref|YP_001540335.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167]
 gi|157919918|gb|ABW01345.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167]
          Length = 299

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 15/201 (7%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           SA+ Y    GK IR  L          N + A+    A+E +H  +L+ DD+  +D   +
Sbjct: 38  SAMHYIHNKGKMIRPLLTLITTHTLGGNLMDAVNPAIAVELVHVATLLQDDI--IDGHLM 95

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQG 158
           RRG  T   +Y     I+A + L+  A E     KT+    +   + L L++  +  L+ 
Sbjct: 96  RRGSETPFKRYGTEYTILASDLLIAKAIEYSLKSKTRRITMELTSAALRLAIGQSYELEY 155

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
            L G+        +D      I + KT +L+  A   G  +A A  N    LR  GE LG
Sbjct: 156 KLNGK--------VDMNIYMRIIENKTASLISAAIVLGGYVADADSNTINLLRSLGEKLG 207

Query: 219 IIFQLADDLLD---CEEDLPK 236
             +Q+ DD++D    ++D PK
Sbjct: 208 AAYQIRDDIIDYLNLDKDNPK 228


>gi|332240581|ref|XP_003269466.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Nomascus
           leucogenys]
          Length = 397

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 115 GKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 172

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 173 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 230

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E   E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 231 K------ENESERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 284

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 285 FQLIDDVLD 293


>gi|302869226|ref|YP_003837863.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302572085|gb|ADL48287.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 355

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 33/212 (15%)

Query: 41  SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNG 98
           +A+R+  L GGK++R          F       + V AA +E  H ++LIHDD+  +D  
Sbjct: 42  TAVRWFVLAGGKRMRPLFCYWGWRGFGGPDAAPIVVAAASLELFHAFALIHDDI--VDRS 99

Query: 99  YIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLK 139
             RRG PT+H                + Y    A++ G+   T++ ++      P  +L+
Sbjct: 100 DRRRGAPTLHRFFAELHAASGWPGDPVAYGRQAAVLCGDLCATWSAQMFHGCGLPPERLR 159

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL-MCFACESG 196
              R  ++L+   +     ++ G+ LD+     D +      + ++KT    +    + G
Sbjct: 160 ---RGHVLLARMRSE----VIAGEYLDVVGAAGDGSVANALTVVRLKTARYTVTRPVQIG 212

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A +A A+  E   L  FG+ LG  FQL DDLL
Sbjct: 213 AALAGAAPEEVAALAGFGDPLGDAFQLRDDLL 244


>gi|167461667|ref|ZP_02326756.1| heptaprenyl diphosphate synthasecomponent II (spore germination
           protein C3) [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322382208|ref|ZP_08056122.1| heptaprenyl diphosphate synthase component II-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153825|gb|EFX46192.1| heptaprenyl diphosphate synthase component II-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 326

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 14/186 (7%)

Query: 49  GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  +V    S F    +    L++ A  E IH  SLIHDD+  +D    RR +P 
Sbjct: 45  GGKRLRPMMVI-VGSRFGPRPSPRKTLQLAAIAEFIHAASLIHDDI--IDRSDTRRNRPA 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H +    TA+   N ++    E++S    +    ++    ++ T       +  G+   
Sbjct: 102 LHTKVGIQTAVHTANYMMARVVELLSQYSKEHDRYVQDFSAITTTQ------LCIGEYQQ 155

Query: 167 IQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   F  D T+   ++K   KT  LM    + GA  + AS    ++L  FGE L + FQ+
Sbjct: 156 LNHRFDFDVTEEVYLEKTGNKTAQLMATCLKVGAKSSDASDAVADKLYQFGECLVMSFQI 215

Query: 224 ADDLLD 229
            DDLLD
Sbjct: 216 RDDLLD 221


>gi|1220524|gb|AAA91949.1| geranylgeranyl pyrophosphate synthase [Streptomyces griseus]
 gi|1632833|emb|CAA64849.1| GGPP synthase [Streptomyces griseus]
          Length = 425

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 31/207 (14%)

Query: 45  YALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           + L GGK++R   L     S        ALR+G A+E I   +LIHDD+  MD   +RRG
Sbjct: 78  FTLEGGKRMRPRLLWWGMRSCGAAETAAALRLGVALELIQSCALIHDDV--MDRSRLRRG 135

Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           KP +HI                 +    A++AG+  L +A + ++  +T L    R ++ 
Sbjct: 136 KPAMHIGLAERAGLSPDSERGSDFGASAAVLAGDLALVWADDTVA--ETVLSAAQRRRIG 193

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQN 205
            +L   +  + M+ GQ LD++ +    + V   Q ++T  L    ++ E    +  A   
Sbjct: 194 -ALWRAMRTE-MVAGQYLDLRGQLSGGSSV--AQALRTACLKSASYSVERPLAIGAALAG 249

Query: 206 EKER----LRCFGENLGIIFQLADDLL 228
             +R    LR  G   GI FQL DDLL
Sbjct: 250 ADDRTTDALRSAGRCAGIAFQLRDDLL 276


>gi|146082077|ref|XP_001464441.1| farnesyl synthetase [Leishmania infantum JPCM5]
 gi|134068533|emb|CAM66828.1| putative solanesyl-diphosphate synthase [Leishmania infantum JPCM5]
 gi|322497846|emb|CBZ32922.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 359

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 13/165 (7%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           L  LR+    E IH  SL+HDD+  +D+   RRG+P +H  YD   A++AG+ +L  A  
Sbjct: 107 LPFLRLAEVTELIHTASLVHDDV--IDSTGTRRGRPALHKVYDAKRAVLAGDYMLARASF 164

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            I++ +         ++++ +T    L+ +  G+++ + D   D  +       KT +L+
Sbjct: 165 YIATLQV-------PRIVILMT--TALEELTAGELIQM-DGCFDIPRYEQKSFCKTASLI 214

Query: 190 CFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
             +  S A++A       E+    FG++LGI FQ+ DD LD   D
Sbjct: 215 ANSLASTAVLADPGNEALEQTAFDFGKHLGIAFQILDDCLDITGD 259


>gi|182440623|ref|YP_001828342.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178469139|dbj|BAG23659.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 425

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 31/207 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           + L GGK++R  L+            TA LR+G A+E I   +LIHDD+  MD   +RRG
Sbjct: 79  FTLDGGKRVRPRLLWWGMRSCGAAETTAALRLGVALELIQSCALIHDDV--MDRSRLRRG 136

Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           KP VHI                 +    A++AG+  L +A + ++  +T L   ++ + +
Sbjct: 137 KPAVHIGLAERAGYSPDSGRGSAFGASAAVLAGDLALAWADDTVA--ETALS-AVQRRRI 193

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL--MCFACESGAIMAHASQN 205
             L   +  + M+ GQ LD++ +    + V   Q ++T  L    ++ E    +  A   
Sbjct: 194 GPLWRAMRTE-MVAGQYLDLRGQVRGGSSVE--QALRTACLKSASYSVERPLALGAALAG 250

Query: 206 EKER----LRCFGENLGIIFQLADDLL 228
             E     LR  G   GI FQL DDLL
Sbjct: 251 ADEATTDALRSAGRCAGIAFQLRDDLL 277


>gi|218200608|gb|EEC83035.1| hypothetical protein OsI_28120 [Oryza sativa Indica Group]
 gi|222640053|gb|EEE68185.1| hypothetical protein OsJ_26326 [Oryza sativa Japonica Group]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 13/160 (8%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R+    E IH  SLIHDD+  +D+   RRG  +++    +  A++AG+ LL+ AF   S
Sbjct: 140 MRLAEITELIHVTSLIHDDV--LDDANTRRGMDSLNCVMGKKLAVLAGDFLLSKAF---S 194

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQK--MKTGALM 189
           +    L DN    L+L+   N     ++ G+ + ++   I    + + +QK   KT AL+
Sbjct: 195 TAAVSL-DNAEVILLLATAVN----NLVTGEFMQMRITPIQRCSMDYYLQKSYYKTAALI 249

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +C++ A++A  +         +G++LGI +QL DD+LD
Sbjct: 250 SNSCKAVAVLAGQTAEVATLAYQYGKHLGIAYQLIDDILD 289


>gi|134294668|ref|YP_001118403.1| trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4]
 gi|134137825|gb|ABO53568.1| Trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4]
          Length = 331

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A            + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 52  GGKRLRPALLLLVAGALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTAN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++ 
Sbjct: 110 ALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMH 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE++   + + KT  L   +   GA+++ A    +     +G  +G  FQ+ DD L
Sbjct: 164 DADVDESRYMQVIRYKTAKLFEASARLGAVLSGADAPTEAAAAEYGRRIGTAFQIMDDWL 223

Query: 229 D 229
           D
Sbjct: 224 D 224


>gi|227503267|ref|ZP_03933316.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens
           ATCC 49725]
 gi|227075770|gb|EEI13733.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens
           ATCC 49725]
          Length = 359

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 43/214 (20%)

Query: 45  YALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + L GGK++R          A   + +    LR  +++E I   +LIHDD+  +D    R
Sbjct: 46  FVLDGGKRVRPMYAWAGYLAAGRGSESPEAMLRAASSLEFIQACALIHDDI--IDASNTR 103

Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIIS----SPKT--QLK 139
           RGKPTVH + + +                 AI+ G+  L YA ++      SP+   + +
Sbjct: 104 RGKPTVHREAERLHRESDFLGDPEFFGTSVAILVGDFALVYAEDMFQDSGLSPEALQRAR 163

Query: 140 DNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES--- 195
           D  R           G++  +LGGQ+LDI  E      V +   +       +  E    
Sbjct: 164 DPWR-----------GMRTEVLGGQLLDISLEAAGSESVALSNSVNRYKTAAYTIERPLH 212

Query: 196 -GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +A AS       R +G ++GI +QL DD L
Sbjct: 213 LGAAIAGASDQLISAFRGYGHDIGIAYQLRDDQL 246


>gi|307194127|gb|EFN76575.1| Decaprenyl-diphosphate synthase subunit 1 [Harpegnathos saltator]
          Length = 337

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK +R  L    A + N      V   +  R+    E IH  SL+HDD+  +D    RRG
Sbjct: 56  GKALRPMLSILMARVINYHKGSDVLSYSQRRIAMISEMIHVASLLHDDV--IDQSDSRRG 113

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           KP+V+I + +    +AG+ +L  A  +++  +      + +Q++  L     +Q  LG +
Sbjct: 114 KPSVNIIWSQKKVAMAGDYILAVAGTMLARIQNDDVTIVINQIITDLVQGEFMQ--LGSK 171

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             + ++E       F    +KT +LM    ++ A +A       E    +G N+G+ FQL
Sbjct: 172 --ETENERF--AHYFTKTYLKTASLMANCSKAVATLAEVDDRMVEMAYQYGRNVGLAFQL 227

Query: 224 ADDLLD 229
            DD LD
Sbjct: 228 VDDFLD 233


>gi|225009967|ref|ZP_03700439.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005446|gb|EEG43396.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C]
          Length = 325

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 18/198 (9%)

Query: 39  LLSAIRYALLG--GKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPS 94
           LL+ I Y ++   GK++R   V   A + +   +     R  + IE IH  +L+HDD+  
Sbjct: 32  LLNRITYYIVNRKGKQMRPMFVFLTAKMLSGGSVQERTYRGASVIELIHTATLVHDDV-- 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D    RRG  +++  +    A++ G+ LL+    +         DN    L+  ++  +
Sbjct: 90  VDGSDKRRGFFSINALWKNKIAVLVGDYLLSKGLLLCI-------DNDDFDLLKIIS--V 140

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            ++ M  G++L I+      I E   + I + KT  L+   C  GA        E E++R
Sbjct: 141 AVREMSEGELLQIEKARRLDITEEVYYHIIRQKTATLIAACCALGAASVSPGSEEVEKMR 200

Query: 212 CFGENLGIIFQLADDLLD 229
            FG  +G+ FQ+ DDL D
Sbjct: 201 EFGSLIGMAFQIKDDLFD 218


>gi|222100092|ref|YP_002534660.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572482|gb|ACM23294.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359]
          Length = 267

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 16/158 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF+ +   + 
Sbjct: 36  AALELVHLASLLHDDV--IDGARFRRGKETINSLYGDRAAVAAGDLVLVSAFQTVEELEN 93

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
              D +R   +     N+ ++ M  G++++    +  I + +   I + K+GAL   A +
Sbjct: 94  ---DTLRRAFL-----NV-IRKMSEGELIEQLKRYTPITKEEYLRIVEGKSGALFGLALQ 144

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A++   S  E   L   G  +G I+Q+ DD++D  E
Sbjct: 145 LPALLKGESGEE---LYKLGVTIGTIYQMLDDIMDFAE 179


>gi|62955289|ref|NP_001017656.1| decaprenyl-diphosphate synthase subunit 1 [Danio rerio]
 gi|62202649|gb|AAH93175.1| Prenyl (decaprenyl) diphosphate synthase, subunit 1 [Danio rerio]
          Length = 411

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNH------LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   NV+       L A R  A I E IH  SL+HDD+  +D+   RR
Sbjct: 129 GKAFRPMIVILMARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDV--IDDSDKRR 186

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T++  + E  AI+AG+ +L+ A   ++        ++ SQ++  L     +Q  LG 
Sbjct: 187 GKNTINNVWGERKAILAGDFILSAASMALARIGNTTVVSVLSQVIEDLVRGEFMQ--LGS 244

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +I+ ++     E    +G N+GI 
Sbjct: 245 K------ENENERFKHYLEKTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIA 298

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 299 FQLVDDILD 307


>gi|311745674|ref|ZP_07719459.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1]
 gi|126575112|gb|EAZ79462.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1]
          Length = 324

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 15/191 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V   A +    + +  R  A IE +H  +L+HDD+  +D+   RRG  +V+ 
Sbjct: 46  GKQMRPMFVFLTAGVCGEINESTHRGAALIELLHTATLVHDDV--VDDANYRRGFFSVNA 103

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+    ++S      K       +L +  N  ++ M  G++L I  
Sbjct: 104 LWKNKIAVLVGDYLLSRGL-LLSVDNGDFK-------LLQIVSN-AVKEMSEGELLQIAK 154

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                I E   + I + KT +L+   C  GA     +     +++ FGE +G+ FQ+ DD
Sbjct: 155 ARKLDITEEVYYQIIRQKTASLIASCCAVGASSVEGNIEVVSKMQEFGEKVGMAFQIKDD 214

Query: 227 LLDC-EEDLPK 236
           L D  EE++ K
Sbjct: 215 LFDYGEEEIGK 225


>gi|108799279|ref|YP_639476.1| polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119868395|ref|YP_938347.1| polyprenyl synthetase [Mycobacterium sp. KMS]
 gi|108769698|gb|ABG08420.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119694484|gb|ABL91557.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
          Length = 386

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 45  YALLGGKKIRSFL-VTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           Y   GGK +R  L +  C  L     L A L   A +E  H   LIHDD+   D  + RR
Sbjct: 50  YPRRGGKALRPALSIAVCLGLGG--QLDAILPTAATLELYHNAFLIHDDI--EDESWWRR 105

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GKPT+HI +    A+  G+ +L+ + + +     ++      +++ ++ H    +  + G
Sbjct: 106 GKPTMHIDHGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAHMT--RRTVEG 163

Query: 163 QMLDIQ-----DEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGEN 216
           Q ++++        +D+     + ++KT         ++GAI A    +  E L   G +
Sbjct: 164 QAIELEWVRSNAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPDRLEPLESLGRH 223

Query: 217 LGIIFQLADDLLDCEED 233
           LG  FQ+ DDLL+   D
Sbjct: 224 LGAAFQITDDLLNLRAD 240


>gi|72381895|ref|YP_291250.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. NATL2A]
 gi|72001745|gb|AAZ57547.1| trans-hexaprenyltranstransferase [Prochlorococcus marinus str.
           NATL2A]
          Length = 323

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L++   +      L   ++    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHTASLVHDDV--VDEADTRRGVE 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH ++D   A++AG+ L   A   +++ +      + S++++ L      QG+      
Sbjct: 102 TVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRVIMDLAEGEIKQGL------ 155

Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              + F D +Q F   ++K   KT +L+  + ++  ++++  Q     L  FG  LG+ F
Sbjct: 156 ---NRF-DSSQSFESYLEKSYCKTASLIANSSKAIGVLSNVDQESLNSLYFFGRQLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QVVDDILD 219


>gi|255722599|ref|XP_002546234.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Candida tropicalis MYA-3404]
 gi|240136723|gb|EER36276.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Candida tropicalis MYA-3404]
          Length = 480

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 37/191 (19%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127
           R+   +E IH  SL+HDD+  + +   RRG+P+ +I +    A++AG+ LL  A      
Sbjct: 188 RLAEIVEMIHTASLLHDDVIDLSDS--RRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 245

Query: 128 ------FEIISSPKTQLKDNIRSQLMLSLTHNIG---------------LQGMLGGQMLD 166
                  E++S+    L +    QL  ++  N                   G +  ++ D
Sbjct: 246 LRNPEVIELLSTTIANLVEGEFMQLKNTVIQNNNDDQIVNDGEVKEIPRPTGKVPTKLHD 305

Query: 167 IQDEFID-ETQV-----FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
                +D ET V     + + K  +KT +LM  +C + A+++ A  +  E    FG NLG
Sbjct: 306 YSVRTVDHETNVDAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDVIENCYSFGRNLG 365

Query: 219 IIFQLADDLLD 229
           + FQ+ DD+LD
Sbjct: 366 LCFQIVDDMLD 376


>gi|67906783|gb|AAY82846.1| predicted geranylgeranyl pyrophosphate synthase CrtE [uncultured
           bacterium MedeBAC46A06]
          Length = 344

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 7/180 (3%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R+ +    A L  V+   AL   AAIE +H  SLIHDD+   D   +RRG+P V  
Sbjct: 59  GKMLRAKMALSAADLLKVDRPAALHWAAAIEVLHNASLIHDDI--CDGDRLRRGRPAVWS 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           Q+    A+  G+ L+  +FE+ +    + +  +   L+  L  ++    +   +  D+Q 
Sbjct: 117 QFGRDVALTLGDWLVALSFELAAEAAQRAQTPM---LVKILATHMKTTTLGEAREFDLQ- 172

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              D          KT  L+    E  A MA           CF   LG  +Q+ +D+L+
Sbjct: 173 PVTDWQHYLQGAGDKTAPLLTAPIEGVATMALHGGAAPTIGACF-RALGNAYQIGNDILN 231


>gi|47221152|emb|CAG05473.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 418

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 37/198 (18%)

Query: 50  GKKIRSFLVTECASLFNVNH------LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRR 102
           GK IR  +V   A   N++       L   R  A I E IH  SL+HDD+  +D    RR
Sbjct: 136 GKAIRPMIVVLMARALNIHSNRSGDLLPGQRAIAMISEMIHTASLVHDDV--IDGSDQRR 193

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T++  + E  AI+AG+ +L+ A                  + L+   NI +  +L  
Sbjct: 194 GKTTINEIWGERKAILAGDFILSAA-----------------SMALARIGNITVVKVLSQ 236

Query: 163 QMLD-IQDEFI------DETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLR 211
            + D ++ EF+      +E + F   ++K   KT +L+  +C++ +I+ ++     E   
Sbjct: 237 VIEDLVRGEFMQLGSKENEKERFKHYLEKTFKKTASLIANSCKAVSILVNSDPEVHEIAF 296

Query: 212 CFGENLGIIFQLADDLLD 229
            +G+N+GI FQL DD+LD
Sbjct: 297 QYGKNVGIAFQLVDDVLD 314


>gi|87303352|ref|ZP_01086140.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. WH 5701]
 gi|87282000|gb|EAQ73962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. WH 5701]
          Length = 323

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 19/226 (8%)

Query: 9   LQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           LQ     ++T+L DL  L+     +     + L SA      GGK+IR  +V   +   +
Sbjct: 8   LQPVENDLETLLSDLRSLIGAGHPILQAAAEHLFSA------GGKRIRPGIVLLLSRALS 61

Query: 67  VN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +  L++   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PDGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNNRLAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         + ++D++        
Sbjct: 120 FAQASWHLANLDDLAVVKLLSRVIMDLADGEVRQGLYRYDTGQSFETYLDKSYC------ 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  + ++  +++  + +  E L  FG  LG+ FQ+ DD+LD
Sbjct: 174 KTASLIANSAKASGVLSGLADDRLEDLYRFGRQLGLAFQVVDDILD 219


>gi|307720825|ref|YP_003891965.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978918|gb|ADN08953.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 295

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 22/190 (11%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK++R+ L+ + A      H  A  + A +E IH  SL+HDD+  +D+   RRG+ +
Sbjct: 27  LQGGKRLRAKLILKIAP----EHKDAPLLAAIVELIHAASLLHDDV--IDDAMTRRGEAS 80

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V+      TA++ G+ L + AF  + +   ++   I S           +  +  G+M+D
Sbjct: 81  VNATDGSKTAVMLGDILYSKAFTELVAFDKKVAQTIAS----------SVTALSKGEMMD 130

Query: 167 I---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   Q+   DE +   +  +KT  L+  A ++    A  +  + ++   +G NLG+ FQ+
Sbjct: 131 VEMAQNFNADEERYLDMLYLKTATLIEAAAKA---SALLAGKDADKHALYGRNLGLSFQI 187

Query: 224 ADDLLDCEED 233
            DD+LD   D
Sbjct: 188 IDDILDITAD 197


>gi|300770135|ref|ZP_07080014.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762611|gb|EFK59428.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 323

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 14/177 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V   A L    + +  R  + +E +H  SL+HDD+  +DN   RRG  +V+ 
Sbjct: 45  GKQMRPMFVFFSAGLCGSINESTFRGASLVELLHTASLVHDDV--VDNANERRGFFSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+    ++S       DN    L+  ++    ++ M  G++L I+ 
Sbjct: 103 LWKNKVAVLVGDFLLSKGL-LLSV------DNNDFHLLKIVSE--AVEQMSEGELLQIEK 153

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                I+E+  F + + KT +L+   C  GA      +   +++  FGE +GI FQ+
Sbjct: 154 ARKLDIEESVYFEVIRQKTASLIASCCACGAASTDVDEETVKKMHAFGEKVGIAFQI 210


>gi|149920952|ref|ZP_01909413.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1]
 gi|149818224|gb|EDM77679.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1]
          Length = 589

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 17/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R  L    A           AL + A +E +H  SL+ DD+  +D   +RRG+  
Sbjct: 311 GGKRARPLLTLSAAEACGGADEAQRALGLAAGVEWLHQGSLLLDDI--VDAAELRRGRQA 368

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H      T+     G+ T+ F  +      +   IRS L+ S         +  G+ L+
Sbjct: 369 LHA----ATSPTFAAGVATFVFARVVRASQGMHPEIRSALVNSAAT------LAEGERLE 418

Query: 167 IQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q   +  +  T  + I   KT +L   A E GA    A + +   L  +G  LG+ FQ+
Sbjct: 419 LQRTGEAELPRTDYYAIIAAKTASLFACAVEVGARAVGAPRGQVRALIRYGRELGLAFQI 478

Query: 224 ADDLLD 229
            DD+LD
Sbjct: 479 IDDVLD 484


>gi|149193697|ref|ZP_01870795.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135650|gb|EDM24128.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
          Length = 287

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 37/193 (19%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  ++T    + N N   A ++ A +E IH  SL+HDD+  +D    RRG  +++ 
Sbjct: 23  GKGIRGKIIT----IINPN---AKKLAAIVEGIHLASLLHDDV--IDEADTRRGVKSINA 73

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML---------SLTHNIGLQGML 160
           +Y + TA++ G+ + +  F  +     ++   I + + L          L+ NI L    
Sbjct: 74  KYGDFTAVMLGDIIYSTCFYDLVDFDKEVAKIISNAVRLLSEGELEDVKLSKNINLD--- 130

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
                  +D+++      MI K KT +L+  +C++ A +   S  + E+   +G N+GI 
Sbjct: 131 -------KDKYMQ-----MIYK-KTASLIEASCKASAFL---SNYDVEKFGTYGRNIGIA 174

Query: 221 FQLADDLLDCEED 233
           FQ+ DDLLD  +D
Sbjct: 175 FQIIDDLLDIIQD 187


>gi|282865630|ref|ZP_06274681.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282559674|gb|EFB65225.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 358

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A L     ++A+    A+E +H +SL+HDD+  MD   +RR +P V  
Sbjct: 68  GKGVRQALAVLGAELCGAPGVSAVPGAVAVELVHAFSLVHDDI--MDGDELRRQRPAVWK 125

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            Y    A++AG+GLL  A + ++    Q    +    +L L+    L  ++ GQ  D+  
Sbjct: 126 SYGTGPAVLAGDGLLAAAVQTLA----QAPGALGGPAVLRLSGA--LTSLVRGQADDLLF 179

Query: 168 ------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                   E +       + + KTGAL+  A   GA++  A       L   G +LG+ F
Sbjct: 180 ADRPWTGPEAVRPDAYRSMAEHKTGALLGCAAALGALLGGAPDTTVTALDRAGRHLGVAF 239

Query: 222 QLADDLLDCEED 233
           Q  DDLL    D
Sbjct: 240 QAVDDLLGIWGD 251


>gi|126348010|emb|CAJ89730.1| putative farnesyl diphosphate synthase [Streptomyces ambofaciens
           ATCC 23877]
          Length = 347

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 11/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +   A+    A+E +H ++L+HDD+  +D   +RR +P   
Sbjct: 62  GGKAVRPALALLSAVAVGADPAAAVPGAVAVELVHDFTLLHDDV--IDGDALRRHQPAAW 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ LL  A   ++    +       +L+ +L        ++ GQ  D+ 
Sbjct: 120 SLFGTPAAVLTGDALLVAALRALTQASPRRAGAAVQELVAALLE------LVEGQSHDVA 173

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     +   KTGAL+  AC  G ++A A       LR FG +LG+ FQ AD
Sbjct: 174 FEKAHDVSVADYLTMAAGKTGALIGCACALGGVLAGADAVRVGGLREFGRHLGVAFQCAD 233

Query: 226 DLL 228
           D+L
Sbjct: 234 DIL 236


>gi|322489859|emb|CBZ25120.1| putative farnesyl synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 359

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 13/165 (7%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           L  LR+    E IH  SL+HDD+  +D    RRG+P +H  YD   A++AG+ +L  A  
Sbjct: 107 LPFLRLAEVTELIHTASLVHDDV--IDKTDTRRGRPALHKVYDTKRAVLAGDYILARASF 164

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            I++ +         ++++ +T    L+ +  G+++ + D   D  +       KT +L+
Sbjct: 165 YIATLQV-------PRIVILMT--TALEELTSGELIQM-DGCFDIPRYEQKSFCKTASLI 214

Query: 190 CFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
             +  S A++A       E+    FG++LGI FQ+ DD LD   D
Sbjct: 215 ANSLASTAVLADPGNEALEQTAFDFGKHLGIAFQILDDCLDITGD 259


>gi|228473247|ref|ZP_04058002.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275397|gb|EEK14189.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
          Length = 327

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 21/192 (10%)

Query: 50  GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R    FLV +  S   V   T  R  A IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 46  GKQMRPMFVFLVAKLVSEGLVQERT-YRGAAVIELIHTATLVHDDV--VDDSNKRRGFFS 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++  +    A++ G+ LL+    ++S       DN    L+  ++  + ++ M  G++L 
Sbjct: 103 INALWKNKIAVLVGDYLLSKGL-LLSI------DNGDFDLLRIIS--VAVREMSEGELLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIF 221
           ++      I E   + I + KT  L+   C  GA  + A +N +  E++R FGE +G+ F
Sbjct: 154 MEKARRLDITEEVYYEIIRQKTATLIAACCAMGAC-SVAPENSQVIEQMRLFGEYVGMAF 212

Query: 222 QLADDLLDCEED 233
           Q+ DDL D  E+
Sbjct: 213 QIKDDLFDYTEE 224


>gi|315427283|dbj|BAJ48895.1| octaprenyl-diphosphate synthase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 312

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 22/193 (11%)

Query: 43  IRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           I  A+ GGK++R   L+T   +L   ++  AL V  A+E  H  SL+HDD+   D   +R
Sbjct: 38  IERAVRGGKRLRPILLLTVFKTLGGTDYTKALDVAVALELAHSASLVHDDIVDFDK--VR 95

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGK ++  Q     AII G+ ++  AF I+     ++     +++ +    +   +G+L 
Sbjct: 96  RGKVSLWYQIGAGKAIIQGHRIINLAFNIVLDIGEEM-----TRIFVE-AWDRASKGIL- 148

Query: 162 GQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
                  DE ++     E    ++ + KT +L   A ++GA++A AS    + +R +G  
Sbjct: 149 -------DEVVNKAALTERLYLLMIREKTASLFEAAAQAGAVLAGASPEMVQHMRRYGSE 201

Query: 217 LGIIFQLADDLLD 229
           +G ++QLADDL +
Sbjct: 202 VGTVYQLADDLTE 214


>gi|288818513|ref|YP_003432861.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6]
 gi|288787913|dbj|BAI69660.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6]
 gi|308752103|gb|ADO45586.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 307

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 18/193 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L          +    L +   IE IH  SL+HDD+  +D    RRG+ + +
Sbjct: 37  GGKRMRPVLSLLTCKALGGDERKVLPLAVGIEYIHVASLLHDDV--VDGADRRRGRLSAN 94

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +     ++ G+ +   A  + S         I S+ ++ +           GQ+L+++
Sbjct: 95  LVFGNDLCVLTGDYMYAKALWLYSRYGDIKSIEIVSRAVMDMAQ---------GQVLELK 145

Query: 169 D--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              + ID+   F I   KTG L   +   GA+M  A + + ER    G  +G  FQL DD
Sbjct: 146 SIGDIIDQETYFSIIDRKTGVLFGASMAVGALM--AGREDYERFYQMGLKVGRAFQLVDD 203

Query: 227 LLD---CEEDLPK 236
            LD    EE L K
Sbjct: 204 ALDYSGSEEKLGK 216


>gi|254495951|ref|ZP_05108859.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii
           LLAP12]
 gi|254354829|gb|EET13456.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii
           LLAP12]
          Length = 322

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   ++  +      + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLASNACSYQGNAHIALAAMVEFFHTATLLHDDV--VDESTLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166
             +    +I+ G+ L T + E++            +  +L L  N  L+   G   Q+ +
Sbjct: 101 NIWGSKASILVGDYLFTQSIELMVDSG--------NPAILKLFANTALEISCGEVKQLSN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +  +   + F + + KT  L   A   G +++ AS+  ++ L  +G +LG  FQL DD
Sbjct: 153 RHNPALTFEEYFDVIRAKTALLFAAAACIGPMLSDASKEVQDSLYAYGLHLGNAFQLIDD 212

Query: 227 LLD 229
            LD
Sbjct: 213 ALD 215


>gi|222823775|ref|YP_002575349.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100]
 gi|222538997|gb|ACM64098.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100]
          Length = 297

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 20/166 (12%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           + ++ A IE IH  SL+HDD+  +D   +RRG  +++ Q+    AI+ G+ L + AF  +
Sbjct: 48  SYKICAIIELIHAASLLHDDV--IDEAKLRRGVKSINAQFGAKNAIMLGDILYSKAFYEL 105

Query: 132 SSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGA 187
           S    +L   I + + MLS+           G+++D+   + F  D+     +   KT  
Sbjct: 106 SLIDLKLAKIISNAVVMLSV-----------GELMDVNLSETFNTDKNAYLQMIYNKTAV 154

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  +   GA++A+ ++++      +G+NLG+ FQ+ DD+LD + D
Sbjct: 155 LIEASARCGALLANLNEDD---FAEYGKNLGLAFQIVDDILDIKGD 197


>gi|224044763|ref|XP_002189942.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1
           [Taeniopygia guttata]
          Length = 677

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 395 GKAFRPMIVVLMARACNIHHNNSKEVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRR 452

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T++  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 453 GKRTLNQIWGERKAVLAGDFILSAASVALA--------RIGNTTIVSVLTQV-IEDLVRG 503

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +I+        E    +G+N+GI
Sbjct: 504 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKVHEIAYQYGKNVGI 563

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 564 AFQLIDDVLD 573


>gi|118404002|ref|NP_001072229.1| prenyl (decaprenyl) diphosphate synthase, subunit 1 [Xenopus
           (Silurana) tropicalis]
 gi|110645682|gb|AAI18814.1| trans-prenyltransferase [Xenopus (Silurana) tropicalis]
          Length = 292

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 22/199 (11%)

Query: 50  GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  LV   A   N++       H +   +    E IH  SL+HDD+  +D    RR
Sbjct: 10  GKAFRPMLVVLMARACNIHYNNCREVHPSQRTIAEISEMIHTASLVHDDV--IDGSDSRR 67

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV   + E  A++AG+ +L+ A   ++         + SQ+ + L     LQ  LG 
Sbjct: 68  GKQTVSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVIALISQIAIDLVRGEFLQ--LGS 125

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     I+K   KT +L+  +C++ +++A       E    +G+N+GI 
Sbjct: 126 K------ENENERFSHYIEKTFKKTASLIANSCKAVSVLACPDPAVHEIAYQYGKNIGIA 179

Query: 221 FQLADDLLD---CEEDLPK 236
           FQL DD+LD   C + L K
Sbjct: 180 FQLIDDVLDFTSCADQLGK 198


>gi|332978343|gb|EGK15068.1| octylprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)]
          Length = 343

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 22/192 (11%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +   C+ L  +     A+ + A  E +H  +L+HDD+  +D   +RRG PT 
Sbjct: 61  GGKRMRPLITLLCSRLCRDEQSEDAMHLAAITEMLHTATLVHDDV--IDESGLRRGHPTA 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +D  TA++ G+ L+  AF ++           +S  +L L  + G   +  G++L +
Sbjct: 119 NATWDNPTAVLVGDYLIARAFNLLVG--------FQSLPLLKLFSD-GTCDIAEGEVLQL 169

Query: 168 QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC---FGENLGIIF 221
           Q +      E     I   KT  L   A    AI+    Q++ E ++    FG++ G  F
Sbjct: 170 QHQHNPQATEDDYMRIIDGKTSRLFMMATCGVAIL----QDKPEFMQPFSDFGQHFGNAF 225

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 226 QIIDDVLDYTGD 237


>gi|227512276|ref|ZP_03942325.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri
           ATCC 11577]
 gi|227084451|gb|EEI19763.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri
           ATCC 11577]
          Length = 325

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 18/191 (9%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R    ++ +E       + L A    AAIE +H  +LIHDD+  +D   +RRG  
Sbjct: 45  GGKLLRPGFFYIYSEFGENIPADKLRA--GAAAIELLHVATLIHDDV--IDQSPLRRGVQ 100

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+H QY +  AI AG+ L T  F+ +        D  R        H   +Q +L G++ 
Sbjct: 101 TIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDATDLQR--------HIEAMQTILNGELD 152

Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            +   +   + +   F     KT  L   + E  AI+ HA ++        G  +G  +Q
Sbjct: 153 QMAFNYRQDMSQKDYFHEITGKTAELFKLSFEQSAILTHAPRDIVTLGGEIGLAIGQAYQ 212

Query: 223 LADDLLDCEED 233
           + DD+LD   D
Sbjct: 213 IQDDILDYGGD 223


>gi|162452480|ref|YP_001614847.1| geranyltranstransferase [Sorangium cellulosum 'So ce 56']
 gi|161163062|emb|CAN94367.1| Geranyltranstransferase [Sorangium cellulosum 'So ce 56']
          Length = 370

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%)

Query: 14  KRIDTILDDLLLQTASHMQT--QHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHL 70
            R+D  LD      A+ +Q   +  + ++S  R   L GGK+ R+ L+         +  
Sbjct: 39  PRVDAALDQRWRDKAASVQRYGREVEAMVSEARSLTLRGGKRFRAGLLVAAYQGVAPDAP 98

Query: 71  --TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---------TAIIA 119
              A+  G A+E +  Y LI DD   +D   +RRG  TVH+   E          +AI+A
Sbjct: 99  LGPAIDAGVALELLQTYLLIQDDW--IDGDTVRRGDRTVHVALTETLGDPHLGASSAILA 156

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+   ++A   ++         + + L+    H    + ++ GQ LD+     D  Q   
Sbjct: 157 GDLTWSFALSTLAGADAPPATTLAAVLLFCKMH----EDVVIGQHLDVVGRAEDVEQ--- 209

Query: 180 IQKMKTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +KTG+       + GA +A A       L  F   +G+ FQL DDLL
Sbjct: 210 MHALKTGSYTVRGPLALGATLAGAPAETVAALERFAAPVGVAFQLRDDLL 259


>gi|90577181|ref|NP_062374.2| decaprenyl-diphosphate synthase subunit 1 [Mus musculus]
 gi|85700953|sp|Q33DR2|DPS1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           1; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 1; AltName: Full=Solanesyl-diphosphate synthase
           subunit 1; AltName: Full=Trans-prenyltransferase 1;
           Short=TPT 1
 gi|81157937|dbj|BAE48219.1| subunit 1 of solanesyl diphosphate synthase [Mus musculus]
 gi|220941795|emb|CAX15884.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus]
          Length = 409

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  A  + A+        E IH  +L+HDD+  +D+   RR
Sbjct: 127 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 184

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 185 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 235

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 236 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 295

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 296 AFQLIDDVLD 305


>gi|148676195|gb|EDL08142.1| prenyl (solanesyl) diphosphate synthase, subunit 1 [Mus musculus]
          Length = 407

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  A  + A+        E IH  +L+HDD+  +D+   RR
Sbjct: 125 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 182

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 183 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 233

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 234 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 293

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 294 AFQLIDDVLD 303


>gi|91070145|gb|ABE11067.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone
           HF10-11A3]
          Length = 327

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 19/221 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTAL- 73
           ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +    LT+  
Sbjct: 15  VENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPEFCLTSKH 74

Query: 74  -RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A   ++
Sbjct: 75  KRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFAQASWHLA 132

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQKM--KTGAL 188
           +      DN+    +LS      +  +  G++    + F D  Q F   I K   KT +L
Sbjct: 133 N-----LDNVNVVKLLSRV----IMDLAEGEIKQNLNRF-DSAQSFSKYINKSYCKTASL 182

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  + ++  +++  +      L  FG+N+G+ FQ+ DD+LD
Sbjct: 183 IANSSKAAGVLSGLNDEHLTSLYDFGKNIGLAFQVVDDILD 223


>gi|253568985|ref|ZP_04846395.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6]
 gi|251841004|gb|EES69085.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6]
          Length = 324

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           D +++ IR     GK +R  LV   A L+       L    ++E +H  SL+HDD+  +D
Sbjct: 34  DSVITHIRKR--NGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDV--VD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG+ +V+  ++   +++AG+ LL  A  ++ + +T   + IR  L+ SL   +  
Sbjct: 90  ESTERRGQLSVNAVFNNKVSVLAGDYLL--ATSLVHAEQTNNYEIIR--LVSSLGQKLAE 145

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             +L  Q+ ++ +    E   F + + KT AL     E+ A+     + E    R  GE 
Sbjct: 146 GELL--QLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEY 203

Query: 217 LGIIFQLADDLLD 229
           +GI FQ+ DD+ D
Sbjct: 204 IGICFQIKDDIFD 216


>gi|227522361|ref|ZP_03952410.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii
           ATCC 8290]
 gi|227090499|gb|EEI25811.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii
           ATCC 8290]
          Length = 325

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 21/220 (9%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVG 76
           L+  LL+  +      + R+L+ ++    GGK +R    ++ +E       + L A    
Sbjct: 19  LEPYLLKAVTLSNQPVHSRILALLKS---GGKLLRPGFFYIYSEFGENIPADKLRA--GA 73

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AAIE +H  +LIHDD+  +D   +RRG  T+H QY +  AI AG+ L T  F+ +     
Sbjct: 74  AAIELLHVATLIHDDV--IDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTH 131

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC 193
              D  R        H   +Q +L G++  +   +   + +   F     KT  L   + 
Sbjct: 132 DATDLQR--------HIEAMQTILNGELDQMAFNYRQDMSQKDYFHEITGKTAELFKLSF 183

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           E  AI+ HA ++        G  +G  +Q+ DD+LD   D
Sbjct: 184 EQSAILTHAPRDIVTLGGEIGLAIGQAYQIQDDILDYGGD 223


>gi|126663213|ref|ZP_01734211.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38]
 gi|126624871|gb|EAZ95561.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38]
          Length = 326

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 37/200 (18%)

Query: 50  GKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK++R    FL  +  S  +++  T  R  + IE IH  +L+HDD+  +D+   RRG  +
Sbjct: 45  GKQMRPMFVFLTAKMVSGGSIDERT-YRGASVIELIHTATLVHDDV--VDDSNKRRGFFS 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQ 157
           ++  +    A++ G+ LL+                    L+LS+ +N         + ++
Sbjct: 102 INALWKNKIAVLVGDFLLSKG------------------LLLSIDNNDFDLLKIISVAVR 143

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERLRCF 213
            M  G++L I+      I E   + I + KT  L+   C  GA  +A   +   E++R F
Sbjct: 144 EMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCSLGACSVAPDDKAVVEKMRKF 203

Query: 214 GENLGIIFQLADDLLDCEED 233
           GE +G+ FQ+ DDL D  +D
Sbjct: 204 GELIGMAFQIKDDLFDYTDD 223


>gi|323717965|gb|EGB27153.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CDC1551A]
          Length = 257

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 20/160 (12%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+    T
Sbjct: 3   AAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL----T 56

Query: 137 QLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            L D       IR   M  L   IG     +L GQ     D+++       +   KT AL
Sbjct: 57  GLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKTAAL 110

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
               C  GA++A+A       L  FG  LG+ FQ  DDL+
Sbjct: 111 TGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 150


>gi|133777358|gb|AAI07274.2| Pdss1 protein [Mus musculus]
          Length = 383

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  A  + A+        E IH  +L+HDD+  +D+   RR
Sbjct: 101 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 158

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 159 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 209

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 210 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 269

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 270 AFQLIDDVLD 279


>gi|282862498|ref|ZP_06271560.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282562837|gb|EFB68377.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 383

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 50/260 (19%)

Query: 4   GLPSKLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT 59
           G PS + + +  +D  L   L   LQ A  M     + +   +  + L GGK++R+  V 
Sbjct: 19  GAPSTVGDATAAVDAFLASYLDDRLQEARQMDAVFAEEVAGRVAAFVLRGGKRLRTAFVW 78

Query: 60  ECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-- 114
            C  L      +  T +R+GAA+E +   +L+HDD+  MD   +RRG P VH  +     
Sbjct: 79  -CGWLAAGRGGDPGTPVRIGAALELLQACALVHDDV--MDGSPVRRGAPAVHADFARAHR 135

Query: 115 --------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-- 158
                          A++AG+  L +A            D++ ++  L+  H   L    
Sbjct: 136 EAGLRGSAASYSATAAVLAGDLALAWA------------DDLLTETALAAPHGDRLHREW 183

Query: 159 ------MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKE 208
                 M+ GQ LD++ +    +     + + T     +  E     GA+ A A      
Sbjct: 184 RAMRSEMVAGQYLDLRAQATGSSDGDEARTIATLKSALYTVERPLALGAVSAAADARATA 243

Query: 209 RLRCFGENLGIIFQLADDLL 228
            LR  G   G+ FQL DDLL
Sbjct: 244 ALRSAGRCAGLAFQLRDDLL 263


>gi|133777361|gb|AAI07275.2| Pdss1 protein [Mus musculus]
          Length = 385

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  A  + A+        E IH  +L+HDD+  +D+   RR
Sbjct: 103 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 160

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 161 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 211

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 212 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 271

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 272 AFQLIDDVLD 281


>gi|294817027|ref|ZP_06775669.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326445912|ref|ZP_08220646.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294321842|gb|EFG03977.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 297

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 83/183 (45%), Gaps = 28/183 (15%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------IQYDEV------TAII 118
             AA+E  H ++LIHDD+  MD+   RRG PTVH          +  D+       TAI+
Sbjct: 20  TAAALEMFHAFALIHDDI--MDDSATRRGSPTVHRALADRLGAALDPDQAGQLGVSTAIL 77

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDET 175
            G+  LT++ E++ +P T      R   +L L   +  +  + GQ LDI   +    D +
Sbjct: 78  VGDLALTWSDELLYAPLTP----HRLAAVLPLVTAMRAE-TVHGQYLDITSARRPGTDTS 132

Query: 176 QVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
               I + KT A  M      GA +A A       L  +    G  FQLADDLL    D 
Sbjct: 133 LALRIARYKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAFQLADDLLGVFGD- 191

Query: 235 PKK 237
           P++
Sbjct: 192 PRR 194


>gi|38233043|ref|NP_938810.1| putative polyprenyl diphosphate synthase component [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38199302|emb|CAE48933.1| Putative polyprenyl diphosphate synthase component [Corynebacterium
           diphtheriae]
          Length = 330

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R       AS +    ++   ++    +E  H  +L HDD+  MD    RRG  +
Sbjct: 51  GGKRFRPMFAL-LASQYGSQPMSENVIKAAVVVEMTHLATLYHDDV--MDEADKRRGVDS 107

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + +++   AI+AG+ LL +   +++    +   +        +T    ++  +G +  D
Sbjct: 108 ANFRWNNSVAILAGDILLAHVARLMADLGVETVAHFSETFAELVTGQ--MRETIGARDGD 165

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             + +++      +   KTG L+  A   G++ A AS    E LR +G  +G++FQ+ DD
Sbjct: 166 PIEHYLN------VINEKTGVLIASAGFLGSMHAGASAEHVEALRAYGRAIGMVFQIVDD 219

Query: 227 LLDCEED 233
           ++D   D
Sbjct: 220 IIDIFSD 226


>gi|254421801|ref|ZP_05035519.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335]
 gi|196189290|gb|EDX84254.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335]
          Length = 323

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNH-LTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  +V   A     +  +T    R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRIRPAIVLLLARATQPDQGITGRHRRLAEITEMIHTASLVHDDV--VDESSTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH ++    A++AG+ L   +   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFGNKVAVLAGDFLFAQSSWYLANLDNLEVVKLLSRVIMDLAEGEIRQGLKHFDTT 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D +++++        KT  L+  + ++  +++  S +  E L  FG +LG+ +Q+ D
Sbjct: 162 LTIDAYLEKSY------YKTATLIANSAKAVGVLSEVSDHMAENLYQFGRSLGLAYQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|119717308|ref|YP_924273.1| polyprenyl synthetase [Nocardioides sp. JS614]
 gi|119537969|gb|ABL82586.1| Polyprenyl synthetase [Nocardioides sp. JS614]
          Length = 358

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 49/248 (19%)

Query: 15  RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFL--VTECASLFNVNHL 70
           RI T +D  + + A  +     D  RL+     ++ GGK+ R+        A   +V   
Sbjct: 16  RIQTAVDAFVDEQAGQLGPLGGDAARLVREAHTSVSGGKRFRAAFCYWGHRAVAADVPDE 75

Query: 71  TAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDE 113
           TAL R  A++E +H  +L+HDDL  MD    RRG P  H                 QY  
Sbjct: 76  TALVRACASLELLHASALVHDDL--MDASDTRRGHPATHRLFESEHRAAGWRGDPEQYGA 133

Query: 114 VTAIIAGNGLLTYAFEIIS---------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
             AI+ G+ LL++A E++          +P  ++ D  R++             ++ GQ 
Sbjct: 134 AAAILLGDLLLSWADELLRRCGLPIAQVAPALEVFDRCRTE-------------VIAGQF 180

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGII 220
           LD+  +      V     +       ++ E     GA +A A       L  FG  LG  
Sbjct: 181 LDVSVQARGRADVETAMTVLRYKSAKYSIERPLHIGAALAGAGPETMAELSAFGLPLGEA 240

Query: 221 FQLADDLL 228
           FQL DDLL
Sbjct: 241 FQLRDDLL 248


>gi|159026272|emb|CAO88848.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 323

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     LV+    L         R+    E IH  SL+HDD+  +D   +RR  P
Sbjct: 44  GGKRVRPAIVLLVSRATMLDRDITPRHRRLAEITEMIHTASLVHDDV--VDEAELRRSVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV+  +D   A++AG+ L   +   +++      DN+    +LS       +G +  Q +
Sbjct: 102 TVNSLFDNRVAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEVIRDFAEGEIQ-QGI 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  I           KT +L+  + ++  +++  S      L  +G NLG+ FQ+ D
Sbjct: 156 NRFDTSISLEAYLEKSYYKTASLIANSAKAAGVLSEQSAEVNHHLYNYGRNLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|254381308|ref|ZP_04996673.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
 gi|194340218|gb|EDX21184.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
          Length = 404

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 35/212 (16%)

Query: 49  GGKKIRS-FLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GG +IRS FL     +    +  T  ALRV AA+E I   +LIHDD+  MD   +RRGKP
Sbjct: 75  GGSRIRSRFLWWALRACGGTDAHTPGALRVAAALELIQSCALIHDDV--MDQSAVRRGKP 132

Query: 106 TVHIQ------------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + H Q                  + +  A++AG+  L++A ++++  +  L   +R++  
Sbjct: 133 SFHTQIALQYSRTTAARQPGLSPFPQAAAVLAGDLALSWADDLVA--EADLDPPVRTE-A 189

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC--FACE----SGAIMAH 201
           L +   +  + M+ GQ LD+  +         +Q ++T  L    +  E     GA +A 
Sbjct: 190 LRIWRAMRTE-MIAGQYLDLHGQATSSRSA--VQAIRTVCLKAARYTVEQPLALGAALAG 246

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A       L   G   GI FQL DDLL   +D
Sbjct: 247 ADDANTRALTAAGRCAGIAFQLRDDLLGVFDD 278


>gi|297686215|ref|XP_002820655.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Pongo
           abelii]
          Length = 415

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 190

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +Q++  L     LQ  LG 
Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVICILTQVIEDLVRGEFLQ--LGS 248

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 249 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 302

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 303 FQLIDDVLD 311


>gi|298387038|ref|ZP_06996592.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
 gi|298260188|gb|EFI03058.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
          Length = 324

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           D +++ IR     GK +R  LV   A L+       L    ++E +H  SL+HDD+  +D
Sbjct: 34  DSVITHIRKR--NGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDV--VD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG+ +V+  ++   +++AG+ LL  A  ++ + +T   + IR  L+ SL   +  
Sbjct: 90  ESTERRGQLSVNAVFNNKVSVLAGDYLL--ATSLVHAEQTNNYEIIR--LVSSLGQKLAE 145

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             +L  Q+ ++ +    E   F + + KT AL     E+ A+     + E    R  GE 
Sbjct: 146 GELL--QLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEY 203

Query: 217 LGIIFQLADDLLD 229
           +GI FQ+ DD+ D
Sbjct: 204 IGICFQIKDDIFD 216


>gi|315504299|ref|YP_004083186.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315410918|gb|ADU09035.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 355

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 33/212 (15%)

Query: 41  SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNG 98
           +A+R+  L GGK++R          F     + + V AA +E  H ++LIHDD+  +D  
Sbjct: 42  TAVRWFVLAGGKRMRPLFCYWGWRGFGGPDASPIVVAAASLELFHAFALIHDDI--VDRS 99

Query: 99  YIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLK 139
             RRG PT+H                  Y    A++ G+   T++ ++      P  +L+
Sbjct: 100 DRRRGAPTLHRFFAELHAASGWPGDPAAYGRQAAVLCGDLCATWSAQMFHGCGLPPERLR 159

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL-MCFACESG 196
              R  ++L+   +     ++ G+ LD+     D +      + ++KT    +    + G
Sbjct: 160 ---RGHVLLARMRSE----VIAGEYLDVVGAAGDGSVANALTVVRLKTARYTVTRPVQIG 212

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A +A A+  E   L  FG+ LG  FQL DDLL
Sbjct: 213 AALAGAAPEEVAALAGFGDPLGDAFQLRDDLL 244


>gi|296242804|ref|YP_003650291.1| polyprenyl synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095388|gb|ADG91339.1| Polyprenyl synthetase [Thermosphaera aggregans DSM 11486]
          Length = 365

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 42/238 (17%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVG 76
           D L + AS +    +     A  Y L GGK+IR+FL      ++     +V+ ++ L   
Sbjct: 24  DALEKEASEVSPHLSSIPYIARDYTLRGGKRIRAFLALVGYWSKAWGTGDVDRVSKLM-- 81

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE----------------VTAIIAG 120
           A +E +  Y L+HDD+  MD   +RRG PTVH+ + E                  AI  G
Sbjct: 82  ATLELLQSYLLVHDDIMDMDE--LRRGGPTVHVWFKEECLKTRVSSNCAHYGVSQAITVG 139

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDET 175
           + L   A E ++     LK    +   L  T++ GL+ +  GQ LD+         + E 
Sbjct: 140 DYLEATAVENLA----MLKLPGEAFEKLITTYSRGLRKVAYGQYLDVLYSSLPLARVGEN 195

Query: 176 QVFMIQKMKTGALMC-FACESGAIMAHASQNEKER----LRCFGENLGIIFQLADDLL 228
            + ++ K+KT +         GAI   AS    +R    L  +    GI FQL DD++
Sbjct: 196 DILVVHKLKTASYTVELPLHLGAI---ASLKYTDRLLNELSSYAIPAGIAFQLRDDII 250


>gi|108743210|dbj|BAE95384.1| hexaprenyl pyrophosphate synthetase [Saccharomyces bayanus]
          Length = 359

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 42/195 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
           R+   +E IH  SL+HDD+  +D    RRG+PT +  +    A++AG+ LL  A   IS 
Sbjct: 148 RLAEIVEMIHTASLLHDDV--IDYSDKRRGRPTGNAAFTNKMAVLAGDFLLGRATVSISR 205

Query: 133 ------------------------------SPKTQLKDN------IRSQLMLSLTHNIGL 156
                                          P T   DN      + S+ +    H   +
Sbjct: 206 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDPDTDTIDNGHKLLPVPSKKLEVKEHEFRV 265

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                G  L   D+ I+    + I K  +KT AL+  +C   AI++ ++    +    FG
Sbjct: 266 PSRQQGLQLS-HDQLIETAFEYYIHKTYLKTAALISKSCRCAAILSGSTPAVVDECYDFG 324

Query: 215 ENLGIIFQLADDLLD 229
            NLGI FQL DD+LD
Sbjct: 325 RNLGICFQLVDDMLD 339


>gi|124025385|ref|YP_001014501.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. NATL1A]
 gi|123960453|gb|ABM75236.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. NATL1A]
          Length = 323

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 19/188 (10%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L++   +      L   ++    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHTASLVHDDV--VDEADTRRGVE 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH ++D   A++AG+ L   A   +++ +      + S++++ L      QG+      
Sbjct: 102 TVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRVIMDLAEGEIKQGL------ 155

Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              + F D +Q F   ++K   KT +L+  + ++  +++   Q     L  FG  LG+ F
Sbjct: 156 ---NRF-DSSQSFESYLEKSYCKTASLIANSSKAIGVLSDVDQESLNSLYFFGRQLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QVVDDILD 219


>gi|270159180|ref|ZP_06187836.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968]
 gi|289165992|ref|YP_003456130.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150]
 gi|269987519|gb|EEZ93774.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968]
 gi|288859165|emb|CBJ13094.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae
           NSW150]
          Length = 322

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLTSNACGYQGQDHIDLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +    +I+ G+ L T + E+   I++P+  LK   R+ L +S             Q+ 
Sbjct: 101 NIWGSKASILVGDYLFTQSIELMVDINNPEV-LKLFARTALEISCGE--------VKQLT 151

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  +  +   + F + + KT  L   A   G I++++S+  +  L  +G +LG  FQL D
Sbjct: 152 NRHNPALTFEEYFDVIRAKTALLFAAAACIGPILSNSSKEMQNALYAYGLHLGNAFQLID 211

Query: 226 DLLD 229
           D LD
Sbjct: 212 DALD 215


>gi|253574559|ref|ZP_04851900.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp.
           oral taxon 786 str. D14]
 gi|251846264|gb|EES74271.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp.
           oral taxon 786 str. D14]
          Length = 326

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 24/198 (12%)

Query: 49  GGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR  +V    S F  + +     R+ AA E IH  SLIHDD+  +D+  +RRG+  
Sbjct: 45  GGKRIRPLMVI-VGSRFGPDPDEKKVWRLAAAAEFIHAASLIHDDI--IDDSPMRRGQKA 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG----- 161
           +HI+     A+  GN +     E+IS    +     R + +  L+     +  LG     
Sbjct: 102 MHIKLGVSGALHVGNYMSARVIELISVYSAE-----REKFVYDLSSLATTKLCLGEYQQL 156

Query: 162 GQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
             + D     DE+++++      K KT  LM    + GA  A A     E L  FGE LG
Sbjct: 157 SHLFDYDVTIDEYLEKS------KNKTAQLMATCLQIGAKAAGADTETAELLYSFGEKLG 210

Query: 219 IIFQLADDLLDCEEDLPK 236
           + FQ+ DD+LD  +   K
Sbjct: 211 MSFQIRDDVLDYTQSAEK 228


>gi|218438214|ref|YP_002376543.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424]
 gi|218170942|gb|ACK69675.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424]
          Length = 323

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     LV++   L         R+    E IH  SL+HDD+  +D   +RR  P
Sbjct: 44  GGKRIRPAIVLLVSKATMLDQEITSRHRRLAEITEMIHTASLVHDDV--VDEAELRRNVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV+  +D   A++AG+ L   +   +++      DN+    +LS       +G +  Q +
Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEVIRDFAEGEIQ-QGI 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  I           KT +LM  + ++ ++++   ++  E L  +G  LG+ FQ+ D
Sbjct: 156 NQFDTGITLDAYLEKSYYKTASLMANSAKAASVLSDVGRDITEHLYNYGRYLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|218245257|ref|YP_002370628.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801]
 gi|257058290|ref|YP_003136178.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802]
 gi|218165735|gb|ACK64472.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801]
 gi|256588456|gb|ACU99342.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802]
          Length = 323

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     LV+    L         R+    E IH  SL+HDD+  +D   +RR  P
Sbjct: 44  GGKRIRPAIVLLVSRATMLEREITPRHRRLAEITEMIHTASLVHDDV--VDEAELRRNVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV+  +D   A++AG+ L   +   +++        + S+++        LQG+      
Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEILQGINRFDTT 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + +++++        KT +L+  + ++ A+++ + +   + L  +G +LG+ FQ+ D
Sbjct: 162 LTLEAYLEKSY------YKTASLIANSAKAAAVLSDSPREMIDHLYDYGRDLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|294055567|ref|YP_003549225.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM
           45221]
 gi|293614900|gb|ADE55055.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM
           45221]
          Length = 344

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 22/226 (9%)

Query: 16  IDTILDDL--LLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNV 67
           +   LDDL   LQ+  + M+ +  D     +RY     GK++R  LV     E  +L   
Sbjct: 24  VKPYLDDLDVFLQSQVAEMEPEVQDH----VRYVFGHSGKRLRPMLVAYSGWEGPALTRA 79

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           + L  +++G+ IE +H  +L+HDD+  +D    R  + T   ++    A++ G+ L ++A
Sbjct: 80  DDL--VKLGSVIELVHLATLVHDDI--LDEADTRHRQETAAKKFGPAAAVLIGDVLFSHA 135

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            ++ +   T       +Q    +      Q    G+ ++   EF      F + ++KT  
Sbjct: 136 LKLAAEFDTNEVCRTVAQATSRVCAGEIAQTYQRGE-VNYSREFY-----FRVIQLKTAE 189

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   +C  GA +A  +    E    FG +LGI +Q+ DDL+D   D
Sbjct: 190 LFEVSCRLGAKVAGYTDEFSEAAGLFGRHLGIAYQIFDDLVDLYAD 235


>gi|254508603|ref|ZP_05120719.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16]
 gi|219548454|gb|EED25463.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16]
          Length = 260

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 11/165 (6%)

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           H TA    A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F
Sbjct: 3   HTTA---AAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSF 57

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++    T+L  +++   ++S   N+  +G +  Q+++  D    E     +   KT  L
Sbjct: 58  QMM----TELG-SMKILKLMSDAVNVIAEGEVQ-QLMNCNDPDTTEEIYMDVIYSKTARL 111

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              A + GAI+  A ++ +  L+ +G+ LG  FQL DD++D   D
Sbjct: 112 FEAATQIGAILNDAPEDVETALQNYGKYLGTAFQLIDDVMDYTSD 156


>gi|332639921|pdb|3RMG|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Bacteroides Thetaiotaomicron
 gi|332639922|pdb|3RMG|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Bacteroides Thetaiotaomicron
          Length = 334

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           D +++ IR     GK +R  LV   A L+       L    ++E +H  SL+HDD+  +D
Sbjct: 36  DSVITHIRKR--NGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDV--VD 91

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG+ +V+  ++   +++AG+ LL  A  ++ + +T   + IR  L+ SL   +  
Sbjct: 92  ESTERRGQLSVNAIFNNKVSVLAGDYLL--ATSLVHAEQTNNYEIIR--LVSSLGQKLAE 147

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             +L  Q+ ++ +    E   F + + KT AL     E+ A+     + E    R  GE 
Sbjct: 148 GELL--QLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEY 205

Query: 217 LGIIFQLADDLLD 229
           +GI FQ+ DD+ D
Sbjct: 206 IGICFQIKDDIFD 218


>gi|301091604|ref|XP_002895983.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095707|gb|EEY53759.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 436

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 33/205 (16%)

Query: 49  GGKKIRS---FLVTECASLFN--------------VNHLTALRVGAAIECIHCYSLIHDD 91
           GGKK+R     LV+  A                    H    R+    E IH  SL+HDD
Sbjct: 143 GGKKVRPTMVLLVSRAAEAHRRATDTPLPETQSEEYMHAAQQRLAEITEMIHTASLMHDD 202

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RRG+P+V+  +    A++AG+ LL  +  +++    +L++    +LM    
Sbjct: 203 V--IDEADTRRGRPSVNKVFGGKMAVLAGDFLLARSSVLLA----RLRNLEAVELM---- 252

Query: 152 HNIGLQGMLGGQML-----DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            +  ++ ++ G+++     D +D+             KTG+LM  +C++   +    Q+ 
Sbjct: 253 -STSIEHLVKGEVMQMKNADARDDISPFEYYLRKNYYKTGSLMSNSCKAALALGKHDQHI 311

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
            +    FG ++G+ FQL DD+LD E
Sbjct: 312 CDLGFAFGRHIGLAFQLIDDVLDYE 336


>gi|225020305|ref|ZP_03709497.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224947049|gb|EEG28258.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 343

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 17/185 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R  + T  AS +    +     +    +E  H  +L HDD+  MD   +RRG P+
Sbjct: 64  GGKRFRP-MFTLLASNYGPRPMCEDVFKAAVVVEMTHLATLYHDDV--MDEAQMRRGVPS 120

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++++    AI++G+ LL +A  I+S         +    +       G   ++ GQM +
Sbjct: 121 ANMRWSNSVAILSGDILLAHASRIMS--------ELGVDTVAHFAETFG--ALVTGQMRE 170

Query: 167 IQDEFI-DETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +     D  + +M +   KTG L+  A   GA+ + A       L+  G  +G++FQ+ 
Sbjct: 171 TEGPGTGDPIEHYMKVINEKTGVLIAAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIV 230

Query: 225 DDLLD 229
           DD++D
Sbjct: 231 DDIID 235


>gi|296168327|ref|ZP_06850251.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896758|gb|EFG76391.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 332

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 24/229 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           G  + +++   RI+ ++D  L  +A  + T     L  A      GGK+ R       A 
Sbjct: 11  GFAATVRDGVGRIEQLMDTELC-SADEVMTDSLTHLFKA------GGKRFRPLFTVLSAQ 63

Query: 64  L-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +  N +       GA IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG+ 
Sbjct: 64  IGPNPDAHEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGAPTANVRWGNNVAILAGDY 121

Query: 123 LLTYAFEIIS--SPKT-QLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
           L   A  ++S   P+  +L     +QL+   +    GL G   G          D  + +
Sbjct: 122 LFATASRLVSLLGPEAVRLIAETFAQLVTGQMRETRGLTGAAEGA---------DPVEHY 172

Query: 179 M-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + +   KT  L+  A   GA+ + A   + ERL   G  +G  FQ++DD
Sbjct: 173 LKVVYEKTACLIAAAGRFGAMFSGADAEQVERLSRLGGIVGTAFQISDD 221


>gi|284992911|ref|YP_003411465.1| trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM
           43160]
 gi|284066156|gb|ADB77094.1| Trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM
           43160]
          Length = 352

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  L    A L + +           E  H  +L HDD+  MD   +RRG P+ +
Sbjct: 73  GGKRFRPLLALLAAELGDPHGQGVTEAAVVCELTHLATLYHDDV--MDEAVVRRGAPSAN 130

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKT-QLKDNIRSQLMLS-LTHNIGLQGMLGGQM 164
            ++    AI+ G+ L   A ++++   P+  +++     +L+   +   +G Q       
Sbjct: 131 SRWSNSIAILTGDFLFARASDLLADLGPEAVRIQARTFERLVTGQIRETVGAQ-----PG 185

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            D  D ++D      +   KTG+L+  +   GA  A         L  FGE +G+ FQL+
Sbjct: 186 DDPVDHYLD------VLADKTGSLVATSARFGASFAGVDAELVTALTAFGEEVGVAFQLS 239

Query: 225 DDLLD 229
           DDLLD
Sbjct: 240 DDLLD 244


>gi|78358229|ref|YP_389678.1| trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220634|gb|ABB39983.1| Trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 322

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 20/187 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A            +  ++E +H  +L+HDD+  +D+  +RRG P  H
Sbjct: 41  GGKRLRPLLAILFARALGRGGDDIYPLACSVELLHSATLLHDDI--IDDAALRRGLPAAH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +     I+AG+ LL  A  I+S    T+L + I   ++ + T          G++ +I
Sbjct: 99  TLFGSTRTILAGDALLALANLIVSRYGDTRLTECIARAIIETAT----------GEIAEI 148

Query: 168 QDEFIDET-----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             E++  T         I K KT  ++  +C+ GAI A A+  +++    FG NLGI FQ
Sbjct: 149 --EYLRSTGHPQETYIEIIKGKTAWMIQASCQLGAIAAGATAQQEQAACDFGMNLGIAFQ 206

Query: 223 LADDLLD 229
           + DD LD
Sbjct: 207 IVDDALD 213


>gi|289435279|ref|YP_003465151.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171523|emb|CBH28067.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 321

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 105/195 (53%), Gaps = 18/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L        +R    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLVPTADFEMVRDASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD + +  MLS   N+ ++ +  G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKD-VAAHKMLS---NVTVE-LSTGEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G I++  S+++ E+L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    E++L K
Sbjct: 213 DDVLDFVGTEKELGK 227


>gi|29348670|ref|NP_812173.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340575|gb|AAO78367.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 324

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           D +++ IR     GK +R  LV   A L+       L    ++E +H  SL+HDD+  +D
Sbjct: 34  DSVITHIRKR--NGKMMRPILVLLVARLYGAVTPATLHAAVSLELLHTASLVHDDV--VD 89

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG+ +V+  ++   +++AG+ LL  A  ++ + +T   + IR  L+ SL   +  
Sbjct: 90  ESTERRGQLSVNAIFNNKVSVLAGDYLL--ATSLVHAEQTNNYEIIR--LVSSLGQKLAE 145

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             +L  Q+ ++ +    E   F + + KT AL     E+ A+     + E    R  GE 
Sbjct: 146 GELL--QLSNVSNHSFSEEVYFDVIRKKTAALFAACAEAAALSVQVGEEEVAFARLLGEY 203

Query: 217 LGIIFQLADDLLD 229
           +GI FQ+ DD+ D
Sbjct: 204 IGICFQIKDDIFD 216


>gi|4580645|gb|AAD24462.1|AF118855_1 trans-prenyltransferase [Mus musculus]
 gi|20071107|gb|AAH26820.1| Pdss1 protein [Mus musculus]
          Length = 336

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  A  + A+        E IH  +L+HDD+  +D+   RR
Sbjct: 54  GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 111

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++S+   + ++ ++ G
Sbjct: 112 GKHTVNKIWGEKKAVLAGDLILSAASVALA--------RIGNTAVVSMLAQV-IEDLVRG 162

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 163 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 222

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 223 AFQLIDDVLD 232


>gi|305679797|ref|ZP_07402607.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
 gi|305660417|gb|EFM49914.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
          Length = 343

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 17/185 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+ R  + T  AS +    +     +    +E  H  +L HDD+  MD   +RRG P+
Sbjct: 64  GGKRFRP-MFTLLASNYGPRPMCEDVFKAAVVVEMTHLATLYHDDV--MDEAQMRRGVPS 120

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++++    AI++G+ LL +A  I+S         +    +       G   ++ GQM +
Sbjct: 121 ANMRWSNSVAILSGDILLAHASRIMS--------ELGVDTVAHFAETFG--ALVTGQMRE 170

Query: 167 IQDEFI-DETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +     D  + +M +   KTG L+  A   GA+ + A       L+  G  +G++FQ+ 
Sbjct: 171 TEGPGTGDPIEHYMKVINEKTGVLIAAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIV 230

Query: 225 DDLLD 229
           DD++D
Sbjct: 231 DDIID 235


>gi|251781555|ref|YP_002995856.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390183|dbj|BAH80642.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126348|gb|ADX23645.1| polyprenyl synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 326

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 12/189 (6%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R    +L +E     +V+    L++  ++E +H  +LIHDD+  +D+  +RRG+ 
Sbjct: 44  GGKYLRPAFFYLFSEFGQEESVDEDKLLKIATSLEILHMATLIHDDI--IDDSPLRRGQE 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           T+  Q+ +  A+  G+ L T  FE I+ S        I ++ M  +     L G L    
Sbjct: 102 TIQSQFGKDVAVYTGDLLFTVFFELILESMANTPYMTINAKTMKKI-----LMGELNQMH 156

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L    E    + +  I   KT  L   A + GA    A           G N+G+ FQ+ 
Sbjct: 157 LQFNQEQTIRSYLHSISG-KTAELFRLASKEGAYFGGADGKIVALAGRIGFNIGMAFQIL 215

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 216 DDILDYTAD 224


>gi|159898866|ref|YP_001545113.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159891905|gb|ABX04985.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 326

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 19/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R+ +V   + L       +L    A+E IH  SL+HDDL  +D+   RRGK TVH
Sbjct: 47  GGKRLRAMMVLLASQLGRYRLSDSLHAATAVELIHAASLVHDDL--VDDADRRRGKVTVH 104

Query: 109 IQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLML---SLTHNIGLQGMLGGQM 164
            ++D+  A++ G+ L   A  E+  +P  ++       +M    S  H + +  +     
Sbjct: 105 AKWDQGVALMVGDYLFAVAAGEMALAPDPRVIQIFAESVMTISASELHPV-MATLPTATA 163

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L+         Q +     KT AL   A  +G +    S  E E    +G ++G+ FQ+ 
Sbjct: 164 LE---------QYYAKIGGKTAALFEAAAAAGVVCGGGSPEEIEAAARYGYDIGLAFQIV 214

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    EE L K
Sbjct: 215 DDILDFVSTEETLGK 229


>gi|325967740|ref|YP_004243932.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323706943|gb|ADY00430.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 343

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 33/210 (15%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          ++  AL   A +E IH YSLI+DD+  +D   +RR K TV 
Sbjct: 42  GGKRLRPLITLTATRACGSDYKVALPAAAIVELIHNYSLIYDDI--IDEALLRRNKLTVR 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +Y +  AI+ G     +  E I     + +D +      + T    ++ +  G+ LDI 
Sbjct: 100 AKYGDNAAILIG----IWYREAIEEAILETRDPVSFARETART----IRAIDEGERLDIL 151

Query: 169 DEFIDETQVFMIQ----------------------KMKTGALMCFACESGAIMAHASQNE 206
            E+      + ++                       +KT AL+  +   GA+ A+     
Sbjct: 152 LEYSGRKDPYFVENRLGPRLLSNWESLYNTYIKMISLKTAALIRASSVFGAMSANTPHCV 211

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           K  L  +G  LG+ FQ+ DD+LD   D+ K
Sbjct: 212 KA-LSDYGTYLGLAFQVLDDILDIFGDVKK 240


>gi|118593444|ref|ZP_01550824.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata
           IAM 12614]
 gi|118433923|gb|EAV40581.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata
           IAM 12614]
          Length = 338

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA +F       + + A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 57  GGKRLRPMLTLACADMFGYQGDGHVTLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +LS    +  +G +  Q+   +
Sbjct: 115 KLWGNQASVLVGDYLLGQAFKMMVDVGS-----LEALRILSTASAVIAEGEVL-QLGAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G ++A  S   K   R +G  LG  FQL DD L
Sbjct: 169 NIATTEADYLRVIEAKTAALFAAAAEVGPVIAGQSAEMKRAARTYGMELGYAFQLVDDAL 228

Query: 229 D 229
           D
Sbjct: 229 D 229


>gi|113952964|ref|YP_730756.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311]
 gi|113880315|gb|ABI45273.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311]
          Length = 323

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 13/185 (7%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   +   + +  L++   R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLISRALSADGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVE 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNYRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLF---RF 158

Query: 166 DIQDEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           D    F    + ++ +   KT +L+  + ++  +++  S+ + E L  +G  LG+ FQ+ 
Sbjct: 159 DTGQSF----ETYLEKSYCKTASLIANSAKAAGVLSGLSEPQLESLYHYGRQLGLAFQVV 214

Query: 225 DDLLD 229
           DD+LD
Sbjct: 215 DDILD 219


>gi|87124214|ref|ZP_01080063.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. RS9917]
 gi|86167786|gb|EAQ69044.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. RS9917]
          Length = 323

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 19/188 (10%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   + +L     LTA   R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLISRALSPSGDLTARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVA 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFR---- 157

Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                  D  Q F   ++K   KT +L+  + ++  +++  S +  + L  +G  LG+ F
Sbjct: 158 ------YDTGQTFATYLEKSYCKTASLIANSAKAAGVLSGESPDHLQALYHYGRQLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QVVDDILD 219


>gi|297192159|ref|ZP_06909557.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197720196|gb|EDY64104.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 345

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV         +   A+R  AA+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 61  GKAVRPALVLAACQALGGDPRQAVRAAAAVELAHNFTLLHDDV--IDEDPTRRHRPTAWS 118

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AIIAG+ +   A  +++  +         +L   +        +  GQ  D   
Sbjct: 119 VFGTADAIIAGDAMSALALRLLAEDRHPASGPAAVRLAACVIE------LCAGQQADCAF 172

Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E     +V +     +   KTGAL+  AC  GA+ A A + +   +  FG   G+ FQL 
Sbjct: 173 EERPPLEVTLEECLAMATAKTGALLGCACALGALYAGADEEQAAAMDAFGREAGLAFQLI 232

Query: 225 DDLL 228
           DDL+
Sbjct: 233 DDLI 236


>gi|313632621|gb|EFR99606.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
           FSL N1-067]
          Length = 324

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 105/195 (53%), Gaps = 18/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L        +R    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 47  GGKRIRPMFVCLSARLVPTADFEMVRDASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD + +  MLS   N+ ++ +  G++  +
Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKD-VAAHKMLS---NVTVE-LSTGEIEQL 155

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G I++  S+++ E+L  FG  +G+ FQ+ 
Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQIT 215

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    E++L K
Sbjct: 216 DDVLDFVGTEKELGK 230


>gi|254389342|ref|ZP_05004570.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|197703057|gb|EDY48869.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 355

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 28/181 (15%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------IQYDEV------TAIIAG 120
           AA+E  H ++LIHDD+  MD+   RRG PTVH          +  D+       TAI+ G
Sbjct: 80  AALEMFHAFALIHDDI--MDDSATRRGSPTVHRALADRLGAALDPDQAGQLGVSTAILVG 137

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQV 177
           +  LT++ E++ +P T      R   +L L   +  +  + GQ LDI   +    D +  
Sbjct: 138 DLALTWSDELLYAPLTP----HRLAAVLPLVTAMRAE-TVHGQYLDITSARRPGTDTSLA 192

Query: 178 FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I + KT A  M      GA +A A       L  +    G  FQLADDLL    D P+
Sbjct: 193 LRIARYKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAFQLADDLLGVFGD-PR 251

Query: 237 K 237
           +
Sbjct: 252 R 252


>gi|260203719|ref|ZP_05771210.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           K85]
 gi|289573154|ref|ZP_06453381.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           K85]
 gi|289537585|gb|EFD42163.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           K85]
          Length = 335

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A +    +       GA IE IH  +L HDD+  MD   +RRG P+ 
Sbjct: 55  GGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSA 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + Q+    AI+AG+ LL  A  +++    +    I   +   +T          GQM + 
Sbjct: 113 NAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTVAQLVT----------GQMRET 162

Query: 168 Q--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   E +D  + ++ + + KTG+L+  A   G + + A+  + ERL   G  +G  FQ+A
Sbjct: 163 RGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIA 222

Query: 225 DD 226
           DD
Sbjct: 223 DD 224


>gi|323127266|gb|ADX24563.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 332

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 10/162 (6%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L + AAIE  H  +LIHDD+  +D   +RR    +H  Y    AI AG+ LL+YA  + +
Sbjct: 70  LYLAAAIETFHLATLIHDDV--IDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLAT 127

Query: 133 --SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ-KMKTGA 187
             +    +KDN        L +++ ++ +L G++  + ++   +   + ++ Q K KT  
Sbjct: 128 RGAQLLNIKDNWEDNG--PLPYHV-VERILAGELAQLMNQHNSQMTMKAYLKQIKGKTAF 184

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L   AC+ G       Q   +     G  LG+ FQL+DDL+D
Sbjct: 185 LFGLACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLID 226


>gi|322411728|gb|EFY02636.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 332

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 10/162 (6%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L + AAIE  H  +LIHDD+  +D   +RR    +H  Y    AI AG+ LL+YA  + +
Sbjct: 70  LYLAAAIETFHLATLIHDDV--IDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLAT 127

Query: 133 SPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ-KMKTGA 187
                  +KDN        L ++I ++ +L G++  + ++   +   + ++ Q K KT  
Sbjct: 128 RGAQLLNIKDNWEDNG--PLPYHI-VERILAGELAQLMNQHNSQMTMKAYLKQIKGKTAF 184

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L   AC+ G       Q   +     G  LG+ FQL+DDL+D
Sbjct: 185 LFGLACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLID 226


>gi|319949926|ref|ZP_08023925.1| putative polyprenyl synthase [Dietzia cinnamea P4]
 gi|319436405|gb|EFV91526.1| putative polyprenyl synthase [Dietzia cinnamea P4]
          Length = 359

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 98/249 (39%), Gaps = 58/249 (23%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-------FLVT 59
           + + E   R+  +L D +L     M+           R+AL G    R         +VT
Sbjct: 32  AAIDERVDRLAGLLSDFVLDGGKRMRP----------RFALAGWAASRPDAGPAPEEVVT 81

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------- 108
            CA+L               E I   +L+HDD+  +D    RRG+PTVH           
Sbjct: 82  ACAAL---------------ELIQACALVHDDI--VDASDTRRGRPTVHRAIESAHRRDG 124

Query: 109 -----IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
                 +Y    AI+ G+  L++A E+     T   D       L   H +  + +L GQ
Sbjct: 125 WDGDAARYGVSQAILVGDLALSWADEMFV---TSGVDPAALGRALGPWHAMKTE-VLSGQ 180

Query: 164 MLDIQDEF---IDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGI 219
           MLDI  E     DE     + + KT A         GA +A A+      LR FG  +G 
Sbjct: 181 MLDILAEASGATDEQTPARVNRFKTAAYTVERPLHIGAELAGATDETVAALREFGVAVGQ 240

Query: 220 IFQLADDLL 228
            FQL DDLL
Sbjct: 241 AFQLRDDLL 249


>gi|90962003|ref|YP_535919.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius UCC118]
 gi|90821197|gb|ABD99836.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
           Farnesyltransferase / Heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius UCC118]
          Length = 328

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 20/193 (10%)

Query: 49  GGKKIRS-----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK +R      F      S   V+    + +  ++E +H  +LIHDD+  +D+   RRG
Sbjct: 45  GGKFLRPAFFLLFTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRG 102

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           + +V  Q+ +  A+ AG+ L T  F++I+       DN+       +     ++ +L G+
Sbjct: 103 EVSVQSQFGKDIAVYAGDYLFTVFFDLIT-------DNVLDTPFFKINSRT-MKKILLGE 154

Query: 164 MLDIQDEFIDETQVFM--IQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +  ++  + +  Q F+  ++ +  KT  L   A   GA    AS          G+N+GI
Sbjct: 155 LNQMKHRY-NTQQTFLNYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGI 213

Query: 220 IFQLADDLLDCEE 232
            FQ+ DD+LD  +
Sbjct: 214 SFQILDDILDYSD 226


>gi|170077205|ref|YP_001733843.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7002]
 gi|169884874|gb|ACA98587.1| Solanesyl diphosphate synthase [Synechococcus sp. PCC 7002]
          Length = 323

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 17/187 (9%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   + +      LT    R+    E IH  SL+HDD+  +D   +RR  P
Sbjct: 44  GGKRVRPAIVLLASRATLGDRPLTQRHRRLAEITEMIHTASLVHDDV--VDEAALRRSVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---NIGLQGMLGG 162
           TV+  +D   A++AG+ L   +   +++        + S+++          GL     G
Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLTVVKLLSEVIKDFAEGEIQQGLNRFDTG 161

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             L+I   +I+++        KT +L+  + ++ A+++       +RL  +G NLG+ FQ
Sbjct: 162 MNLEI---YIEKSY------YKTASLIGNSAKAAAVLSEVDPEIGDRLYDYGRNLGLAFQ 212

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 213 IVDDILD 219


>gi|291449974|ref|ZP_06589364.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291352923|gb|EFE79825.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 435

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 23/158 (14%)

Query: 44  RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           R+  LGG+++R     + +  CA         ALRVGAA+E +   +L+HDD+  MD+  
Sbjct: 122 RFTSLGGRRLRPALLWWALRACALPDGDRARAALRVGAAVELLQTCALVHDDV--MDSSR 179

Query: 100 IRRGKPTVHI----QYDE--------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +RRG+P +H+    QY            A++AG+  L +A + ++  +T+L D +R ++ 
Sbjct: 180 LRRGRPALHVSLADQYGAAGTDLFAGAAAVLAGDLALAWAEDTLA--ETELPDPVRRRVR 237

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKMK 184
                  G   M+ GQ LD+  +   D + +  ++  +
Sbjct: 238 AVWRVMRGE--MVAGQYLDLHGQVTADRSALLALRTAR 273


>gi|227891019|ref|ZP_04008824.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius ATCC 11741]
 gi|227867428|gb|EEJ74849.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius ATCC 11741]
 gi|300214709|gb|ADJ79125.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
           Farnesyltransferase / Heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius CECT 5713]
          Length = 328

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 20/193 (10%)

Query: 49  GGKKIRS-----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK +R      F      S   V+    + +  ++E +H  +LIHDD+  +D+   RRG
Sbjct: 45  GGKFLRPAFFLLFTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRG 102

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           + +V  Q+ +  A+ AG+ L T  F++I+       DN+       +     ++ +L G+
Sbjct: 103 EVSVQSQFGKDIAVYAGDYLFTVFFDLIT-------DNVLDTPFFKINSRT-MKKILLGE 154

Query: 164 MLDIQDEFIDETQVFM--IQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +  ++  + +  Q F+  ++ +  KT  L   A   GA    AS          G+N+GI
Sbjct: 155 LNQMKHRY-NTQQTFLNYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGI 213

Query: 220 IFQLADDLLDCEE 232
            FQ+ DD+LD  +
Sbjct: 214 SFQILDDILDYSD 226


>gi|227548900|ref|ZP_03978949.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079028|gb|EEI16991.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 380

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 41/215 (19%)

Query: 45  YALLGGKKIRS-------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           + L GGK+IR        F       + + +    LR  +++E I   +LIHDD+  +D 
Sbjct: 63  FILGGGKRIRPLYAWTGFFGARAAGGVGSEDPEAVLRAVSSLELIQACALIHDDI--IDA 120

Query: 98  GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG PTVH                  Y    AI+ G+  L +A ++        + +
Sbjct: 121 SDTRRGNPTVHRAVEARHSKDDLFGDSADYGRNEAILIGDFALIWAEDM-------WRYS 173

Query: 142 IRSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195
             S+  L+       +GM    +GGQ+LDI  E      V M   +       +  E   
Sbjct: 174 GLSEAALTRAAEP-WRGMRTEVIGGQLLDIALEAAANESVEMANNVNRYKTAAYTIERPL 232

Query: 196 --GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             GA +A A  +  E  R +G ++GI FQL DDLL
Sbjct: 233 HLGAAIAGAPADTIEAFRGYGRDIGIAFQLRDDLL 267


>gi|326560787|gb|EGE11154.1| solanesyl diphosphate synthase [Moraxella catarrhalis 103P14B1]
 gi|326574419|gb|EGE24361.1| solanesyl diphosphate synthase [Moraxella catarrhalis 101P30B1]
          Length = 331

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A  L +     A+++ A  E +H  +L+HDD+  +D   +RRGKPT 
Sbjct: 48  GGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPTA 105

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +D  TA++ G+ L+  +F ++            + L L    + G   +  G++L +
Sbjct: 106 NATWDNPTAVLVGDYLIARSFNLLVG---------FNHLPLLKLFSDGTCDIAEGEVLQL 156

Query: 168 QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q +      E+    I   KT  L   A + GA +    +   + L  F  + G  FQ+ 
Sbjct: 157 QHQHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMI 215

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 216 DDVLDFSGD 224


>gi|221134021|ref|ZP_03560326.1| hypothetical protein GHTCC_03754 [Glaciecola sp. HTCC2999]
          Length = 292

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 20/208 (9%)

Query: 35  HNDRLLSA-IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H+DRLLS  I+Y     G   R+ +    +   ++    A+   + +E +H  SLIHDD+
Sbjct: 29  HDDRLLSQMIQYHGTSQGNATRALISLYASDALHLRQQDAVAAASIVETLHTASLIHDDI 88

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLS 149
              D    RRGKP++  Q+ E  A+ AG+  L+ A+     IS P TQ+      Q ++ 
Sbjct: 89  --QDREPHRRGKPSLWHQFGEGPALCAGDFYLSKAYSHCADISQP-TQI------QRLIQ 139

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L H   +   + GQ  DI    I  T      I   K+G L+  A     ++A    +E 
Sbjct: 140 LVHQ-SITQTISGQTSDITSTDIRTTSQDYETIAINKSGPLLGLALRIPLLLAGYDDDET 198

Query: 208 ERL--RCFGENLGIIFQLADDLLDCEED 233
           +    +C  E   + +Q+ DDL D + D
Sbjct: 199 QVWMKQCI-EPFALSYQIVDDLFDTQID 225


>gi|240103297|ref|YP_002959606.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3]
 gi|239910851|gb|ACS33742.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3]
          Length = 309

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 11/181 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    +    ++   AL + +AIE IH  SL+HDD+  +D    RR  PTV 
Sbjct: 33  GGKRIRPRITLAVSKGLGLDENDALDLASAIELIHTASLVHDDV--IDLAEKRRNNPTVV 90

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +++    A+++G+ L   A  II+  K  + D +   +   +   I  + + G   LD+ 
Sbjct: 91  MRWGPELAVLSGDFLFVRALRIIAKKKAAMVDYVAKAVEDMVKGEILQEAVRGSVHLDLD 150

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                    + I   KTG L  F         +  +     L   G  +G  FQ+ DD+L
Sbjct: 151 -------TYYEIIDRKTGKL--FGAAFALPAYYLEKPYWMELDKAGTLVGRAFQIVDDVL 201

Query: 229 D 229
           D
Sbjct: 202 D 202


>gi|296117524|ref|ZP_06836108.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969255|gb|EFG82496.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306]
          Length = 366

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%)

Query: 44  RYALLGGKKIRSF-----LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           R+ L GGK+IR        V     L + +    LR  +++E I   +LIHDD+  +D  
Sbjct: 50  RFILGGGKRIRPLYVWAGFVAADGLLGDEDPQAVLRAASSLEFIQSCALIHDDI--VDAS 107

Query: 99  YIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH                  +    AI+ G+  L +A ++       L D+ 
Sbjct: 108 DTRRGNPTVHRAVEAEHRKLGWTGDPEAFGRSAAILIGDMSLVWAEDM-------LLDSG 160

Query: 143 RSQLMLSLTHNIGLQ---GMLGGQMLDIQDEFIDETQVFM---IQKMKTGALMC-FACES 195
            SQ  L  T          ++GGQ+LD+  E      V +   + + KT A         
Sbjct: 161 LSQAALQRTREPWRAMRTEVIGGQLLDVSLEAAAIESVELSDSVNRFKTAAYTIERPLHL 220

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           GA +A A Q   +  R +G ++GI FQL DD L
Sbjct: 221 GAAIAGAPQKLIDAFRGYGRDIGIAFQLRDDQL 253


>gi|300776952|ref|ZP_07086810.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
           35910]
 gi|300502462|gb|EFK33602.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
           35910]
          Length = 325

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 8/180 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V  CA L         R  + IE IH  +L+HDD+  +D  + RR   +++ 
Sbjct: 46  GKQMRPMFVFLCAKLVGEVTEKTYRGASMIELIHTATLVHDDV--VDESFKRRNFFSINA 103

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+ +  + +  K      + S+ +  ++    LQ +   + LDI +
Sbjct: 104 LWKNKIAVLVGDYLLSKSVLLSTDHKDYDLLGVISRTIREMSEGELLQ-LEKARKLDITE 162

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +   E     I + KT  L+   CE G +  +A +   +++  FG   G+ FQ+ DDL D
Sbjct: 163 DVYYE-----IIRQKTATLIAACCEIGVLSNNADEALAKKMMDFGTFTGMAFQIKDDLFD 217


>gi|301300397|ref|ZP_07206599.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851999|gb|EFK79681.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 328

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 20/193 (10%)

Query: 49  GGKKIRS-----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK +R      F      S   V+    + +  ++E +H  +LIHDD+  +D+   RRG
Sbjct: 45  GGKFLRPAFFLLFTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRG 102

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           + +V  Q+ +  A+ AG+ L T  F++I+       DN+       +     ++ +L G+
Sbjct: 103 EVSVQSQFGKDIAVYAGDYLFTVFFDLIT-------DNVLDTPFFKINSRT-MKKILLGE 154

Query: 164 MLDIQDEFIDETQVFM--IQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +  ++  + +  Q F+  ++ +  KT  L   A   GA    AS          G+N+GI
Sbjct: 155 LNQMKHRY-NTQQTFLNYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGI 213

Query: 220 IFQLADDLLDCEE 232
            FQ+ DD+LD  +
Sbjct: 214 SFQILDDILDYSD 226


>gi|300932807|ref|ZP_07148063.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens
           DSM 45100]
          Length = 340

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 18/193 (9%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           A+ GGK+ R  + T  A+L+     +    +    +E  H  +L HDD+  MD    RRG
Sbjct: 57  AIAGGKRFR-VVFTLLAALYGDKPTSQNVYKAAVVVELTHLATLYHDDV--MDEADRRRG 113

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             + ++++    AI+AG+ L   A ++++        +  S            + ++ GQ
Sbjct: 114 ADSANMRWGNSIAILAGDYLFAVASDMLADLGAATVSHFASTF----------RELVTGQ 163

Query: 164 MLDIQD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           M +     E  D  + +M + + KTG L+  A   GA  + A    ++ L  FG N+G +
Sbjct: 164 MRETVGCAEGEDPIEHYMTVIQEKTGVLIAAAGFLGAEHSGAPAEVRDALHAFGRNMGQV 223

Query: 221 FQLADDLLDCEED 233
           FQ+ DD++D   D
Sbjct: 224 FQIVDDIIDIWSD 236


>gi|326563527|gb|EGE13786.1| solanesyl diphosphate synthase [Moraxella catarrhalis 12P80B1]
          Length = 348

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A  L +     A+++ A  E +H  +L+HDD+  +D   +RRGKPT 
Sbjct: 65  GGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPTA 122

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +D  TA++ G+ L+  +F ++            + L L    + G   +  G++L +
Sbjct: 123 NATWDNPTAVLVGDYLIARSFNLLVG---------FNHLPLLKLFSDGTCDIAEGEVLQL 173

Query: 168 QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q +      E+    I   KT  L   A + GA +    +   + L  F  + G  FQ+ 
Sbjct: 174 QHQHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMI 232

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 233 DDVLDFSGD 241


>gi|87311122|ref|ZP_01093246.1| polyprenyl synthetase [Blastopirellula marina DSM 3645]
 gi|87286213|gb|EAQ78123.1| polyprenyl synthetase [Blastopirellula marina DSM 3645]
          Length = 616

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 9/195 (4%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+  AL GG+   +          +    TAL    AIE  H  SL+HDD+   D+ Y R
Sbjct: 303 AVYDALTGGEGTSAGGAARVGEYSDSVKRTAL----AIETFHKASLVHDDIED-DDAY-R 356

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGML 160
            G  T+H +Y   TAI  G+ ++   + ++S    QL      +++  L   ++ L    
Sbjct: 357 YGDVTIHRKYGVPTAINLGDYMIGLGYRLVSRDMAQLGGETAGRIIDCLADAHMRLSEGQ 416

Query: 161 GGQML--DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           G ++L  D  D+ +       I  +KT      A + G +++   ++    +R F  ++G
Sbjct: 417 GAELLWRDAADKSLKPVDALKIYALKTSPAFEAALQCGVLLSGTEEDYSNSMRQFARHVG 476

Query: 219 IIFQLADDLLDCEED 233
           + FQ+ +DL D   D
Sbjct: 477 VAFQILNDLKDWRGD 491


>gi|331701966|ref|YP_004398925.1| trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129309|gb|AEB73862.1| Trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL
           B-30929]
          Length = 325

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 20/192 (10%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R    ++ +E     +   + A    AA+E +H  +LIHDD+  +D   IRRG  
Sbjct: 45  GGKFLRPGFFYIYSEFGQEVDPAKIKA--GAAAVELLHVATLIHDDV--IDESPIRRGIE 100

Query: 106 TVHIQYDEVTAIIAGNGLLT-YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           T+H +Y +  AI AG+ L T Y  +++ S  TQ   N++        H   +Q +L G++
Sbjct: 101 TIHTEYGQKNAIYAGDYLFTCYFTQVLKS--TQDPANMKR-------HVDAMQTILAGEL 151

Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             ++  F   + E   F     KT  L     +  A+++ AS    +     G  +G  +
Sbjct: 152 DQMKYNFNQQMTEADYFHEITGKTAELFRLCFQQSALVSQASDQIFKLGGEIGLTIGQAY 211

Query: 222 QLADDLLDCEED 233
           Q+ DD+LD   D
Sbjct: 212 QILDDILDYSGD 223


>gi|291277470|ref|YP_003517242.1| polyprenyl synthetase [Helicobacter mustelae 12198]
 gi|290964664|emb|CBG40519.1| polyprenyl synthetase [Helicobacter mustelae 12198]
          Length = 298

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 108/207 (52%), Gaps = 21/207 (10%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           Q A +++   ++ +L   ++ L  GK +RS L+   A     NH   +++ A +E I   
Sbjct: 11  QIADYIKELESEEILDFCKH-LQNGKMLRSRLILAIAP----NHPDVIKLCAIVEMIQNA 65

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D+  +RRG P+++  +    +I+ G+   + AF  +     ++  +I S 
Sbjct: 66  SLLHDDV--IDDSLLRRGNPSINALFGNKNSIMLGDVFYSKAFFELLDLDKRITKSI-SD 122

Query: 146 LMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            ++ L+     +G +   M+    Q +F+    + MI+  KT +L+  +  S +I+A+  
Sbjct: 123 CVVRLS-----RGEISDVMMSRAFQPDFL--KYLNMIED-KTASLVASSAMSASILANL- 173

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
             + ++   +G NLGI FQ+ DDLLD 
Sbjct: 174 --DVKKHYNYGLNLGIAFQIVDDLLDV 198


>gi|40882370|dbj|BAD07374.1| farnesyl diphosphate synthase [Actinoplanes sp. A40644]
          Length = 362

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 31/209 (14%)

Query: 45  YALLGGKKIRSFL-----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK+IR        +              L   +  E +H   LIHDD+  +D   
Sbjct: 47  FVLRGGKRIRPTFAWLGWIGAGGDPEGPGAEAVLSACSGFELLHAAGLIHDDI--IDASR 104

Query: 100 IRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG P  HI Y E                 TAI+ G+  L +A  ++   +       R
Sbjct: 105 TRRGHPAAHITYAERHRASRFSGDSQIFGTGTAILIGDLALIWADVLVRGSRLPADAQAR 164

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMC-FACESGAIM 199
              + S   +     ++ GQ+LD+  +  D+  V     + + KT +       + GA +
Sbjct: 165 VSPVWSAVRS----EVMYGQLLDLISQARDDEDVDAALRVNRYKTASYTVERPLQFGAAI 220

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228
           A AS +     R FG  LGI FQL DDLL
Sbjct: 221 AGASPDLITAYRSFGAGLGIAFQLRDDLL 249


>gi|332669463|ref|YP_004452471.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
 gi|332338501|gb|AEE45084.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
          Length = 334

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L + +    +     +E  H  +L HDD+  MD+  +RRG P+ H
Sbjct: 51  GGKRLRPLLTLLTAELGDGSRREVVDAATVVELTHLATLYHDDV--MDSAPLRRGAPSAH 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A   ++       D +R Q           + +  GQ+ +  
Sbjct: 109 EVWGNSVAILTGDLLFARASATVAGLG---PDAVRIQAAT-------FERLCLGQLHETV 158

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                E  V     +   KT +L+  +   GA+ A    +    +  FGE LG+ FQLAD
Sbjct: 159 GPRPGEDPVAHYLQVLADKTASLVATSARFGAMFAGCRPDVVRTVTGFGEKLGVAFQLAD 218

Query: 226 DLLDCEED 233
           D++D   D
Sbjct: 219 DVIDLTSD 226


>gi|297570910|ref|YP_003696684.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931257|gb|ADH92065.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 338

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 33/229 (14%)

Query: 11  ENSKRIDTILDDLLLQTA-SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVN 68
           E   R+   +DDL++  A SH+              A  GGK++R  L    A L     
Sbjct: 27  EAQLRLAVQVDDLVVDEATSHL--------------AKAGGKRLRPALCLLTAQLGPRPA 72

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L     +E  H  +L HDD+  MD   +RRG P+    Y   +AI+AG+ L   A 
Sbjct: 73  SPDVLDSAVVVELTHLATLYHDDV--MDEAPLRRGVPSAQYVYGNSSAILAGDVLFARAS 130

Query: 129 EIIS--SPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
            I++   P+  L   +      M  L   IG +        + +D      QV      K
Sbjct: 131 GIVAKLGPEAVLLHAETFERLCMGQLHETIGPR--------EGEDPIQHHIQVL---ADK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TG+L+  +   G + +       E +  FG+ +G+ FQ+ADD++D   D
Sbjct: 180 TGSLIAASGRYGVLYSGGDPALAEEIAQFGDKVGVAFQIADDVIDLVSD 228


>gi|315644722|ref|ZP_07897852.1| Polyprenyl synthetase [Paenibacillus vortex V453]
 gi|315279872|gb|EFU43172.1| Polyprenyl synthetase [Paenibacillus vortex V453]
          Length = 334

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 13/191 (6%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  +V    S F V+ H +A ++    +E +H  SL+HDD+  +D   +RRG PT
Sbjct: 45  GGKRLRPLMVM-LGSRFGVSGHESAVMKTAVLLEYLHMASLVHDDI--IDQSDMRRGMPT 101

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-----LQGMLG 161
           +H   D  TA+  GN ++  A E  +    +  D     +     + +      +  +  
Sbjct: 102 LHETTDVQTAVHIGNYMIARAIEWAAGHPGEESDGASEAVSEEDAYRLAELAALVTELCM 161

Query: 162 GQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           G+   +   F   +   Q     + KT  LM    ++GA  A A     E L  FGE LG
Sbjct: 162 GEYDQLHHRFNYDLTMEQYLEKTRCKTALLMAHCLKAGAEAAKADARTAELLFQFGEALG 221

Query: 219 IIFQLADDLLD 229
           + FQ+ DDLLD
Sbjct: 222 MAFQIRDDLLD 232


>gi|120404508|ref|YP_954337.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119957326|gb|ABM14331.1| geranylgeranyl-diphosphate synthase [Mycobacterium vanbaalenii
           PYR-1]
          Length = 359

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 32/208 (15%)

Query: 45  YALLGGKKIR-SFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           + L GGK++R +F      ++        ALR+ +A+E +H  +L+HDD+  +D    RR
Sbjct: 47  FVLRGGKRLRPAFAYWGWRAVAGTEPGPEALRLFSALELLHACALVHDDV--IDASATRR 104

Query: 103 GKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           G PTVH                 Q+    AI+ G+  L +A +I++S +  ++ + R Q 
Sbjct: 105 GLPTVHRIFAERHRSNNWLGSSEQFGLSAAILLGDVALVWADDIVASAEIGVEAHRRVQR 164

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHAS 203
           + +         +LGGQ LDI +E      V     +   KT +          + A A+
Sbjct: 165 VWAAIRT----EVLGGQYLDIVNEATGAETVASALTVNIYKTASYTI--SRPLQLGAAAA 218

Query: 204 QNEKERLRCF---GENLGIIFQLADDLL 228
            +  E L  F   G +LG+ FQL DD+L
Sbjct: 219 ADCPEVLSAFHELGTSLGVAFQLRDDVL 246


>gi|306836504|ref|ZP_07469475.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726]
 gi|304567594|gb|EFM43188.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726]
          Length = 359

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 37/211 (17%)

Query: 45  YALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + L GGK++R          A   + +    LR  +++E I   +LIHDD+  +D    R
Sbjct: 46  FVLDGGKRVRPMYAWAGYLAAGRGSESPEAMLRAASSLEFIQACALIHDDI--IDASNTR 103

Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           RGKPTVH + + +                 AI+ G+  L YA ++        +D+  S 
Sbjct: 104 RGKPTVHREAERLHRESDFLGDPEFFGTSVAILVGDFALVYAEDM-------FQDSGLSP 156

Query: 146 LMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GA 197
             L        +GM    LGGQ+LDI  E      V +   +       +  E     GA
Sbjct: 157 EALQRAREP-WRGMRTEVLGGQLLDISLEAAGSESVALSNSVNRYKTAAYTIERPLHLGA 215

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +A A +      R +G ++GI +QL DD L
Sbjct: 216 AIAGAREELISAFRGYGHDIGIAYQLRDDQL 246


>gi|78777056|ref|YP_393371.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497596|gb|ABB44136.1| Polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 295

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 30/207 (14%)

Query: 38  RLLSAIRY--------ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           RL+  I Y         L GGK++R+ L+ + A        TA  +GA +E IH  SL+H
Sbjct: 10  RLIKEIDYDEVTNLFNKLQGGKRLRAGLILKIAPTCT----TAPLLGAIVELIHAASLLH 65

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRG  +++      TA++ G+ L + AF  + +   ++   I S     
Sbjct: 66  DDV--IDEATLRRGVASINATDGSKTAVMLGDILYSKAFSELVAFDKEIAKVISS----- 118

Query: 150 LTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
                 +  +  G+M+D++    F  DE +   +  +KT  L+          A  +Q +
Sbjct: 119 -----SVTALSKGEMMDVKMASAFNSDEERYLEMLYLKTATLIEACA---HAAALLAQKD 170

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
                 +G+NLG+ FQ+ DD+LD   D
Sbjct: 171 ALSHSIYGKNLGLSFQIIDDILDITSD 197


>gi|15607702|ref|NP_215076.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv]
 gi|15839960|ref|NP_334997.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31791744|ref|NP_854237.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97]
 gi|121636480|ref|YP_976703.1| putative polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148660331|ref|YP_001281854.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
           tuberculosis H37Ra]
 gi|148821763|ref|YP_001286517.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           F11]
 gi|167968365|ref|ZP_02550642.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           H37Ra]
 gi|215402328|ref|ZP_03414509.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           02_1987]
 gi|215410099|ref|ZP_03418907.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425797|ref|ZP_03423716.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T92]
 gi|215444672|ref|ZP_03431424.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T85]
 gi|218752200|ref|ZP_03530996.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           GM 1503]
 gi|219556398|ref|ZP_03535474.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T17]
 gi|224988952|ref|YP_002643639.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797494|ref|YP_003030495.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 1435]
 gi|254230904|ref|ZP_04924231.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           C]
 gi|254363521|ref|ZP_04979567.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254549517|ref|ZP_05139964.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185436|ref|ZP_05762910.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199565|ref|ZP_05767056.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T46]
 gi|289441947|ref|ZP_06431691.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T46]
 gi|289446109|ref|ZP_06435853.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552814|ref|ZP_06442024.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 605]
 gi|289568490|ref|ZP_06448717.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T17]
 gi|289744275|ref|ZP_06503653.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis
           02_1987]
 gi|289749061|ref|ZP_06508439.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T92]
 gi|289756639|ref|ZP_06516017.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T85]
 gi|289760681|ref|ZP_06520059.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           GM 1503]
 gi|294996072|ref|ZP_06801763.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           210]
 gi|297633052|ref|ZP_06950832.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 4207]
 gi|297730029|ref|ZP_06959147.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN R506]
 gi|298524050|ref|ZP_07011459.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774666|ref|ZP_07413003.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu001]
 gi|306779417|ref|ZP_07417754.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu002]
 gi|306783203|ref|ZP_07421525.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu003]
 gi|306787573|ref|ZP_07425895.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu004]
 gi|306792123|ref|ZP_07430425.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu005]
 gi|306796310|ref|ZP_07434612.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu006]
 gi|306802169|ref|ZP_07438837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu008]
 gi|306806378|ref|ZP_07443046.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu007]
 gi|306966577|ref|ZP_07479238.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu009]
 gi|306970770|ref|ZP_07483431.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu010]
 gi|307078494|ref|ZP_07487664.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu011]
 gi|307083056|ref|ZP_07492169.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu012]
 gi|313657357|ref|ZP_07814237.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN V2475]
 gi|2114024|emb|CAB08957.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL
           PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis
           H37Rv]
 gi|13880100|gb|AAK44811.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31617330|emb|CAD93439.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL
           PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis
           AF2122/97]
 gi|121492127|emb|CAL70592.1| Probable polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124599963|gb|EAY58973.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           C]
 gi|134149035|gb|EBA41080.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148504483|gb|ABQ72292.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
           tuberculosis H37Ra]
 gi|148720290|gb|ABR04915.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           F11]
 gi|224772065|dbj|BAH24871.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318997|gb|ACT23600.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414866|gb|EFD12106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T46]
 gi|289419067|gb|EFD16268.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437446|gb|EFD19939.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 605]
 gi|289542244|gb|EFD45892.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T17]
 gi|289684803|gb|EFD52291.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis
           02_1987]
 gi|289689648|gb|EFD57077.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T92]
 gi|289708187|gb|EFD72203.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           GM 1503]
 gi|289712203|gb|EFD76215.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T85]
 gi|298493844|gb|EFI29138.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216772|gb|EFO76171.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu001]
 gi|308327631|gb|EFP16482.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu002]
 gi|308331986|gb|EFP20837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu003]
 gi|308335773|gb|EFP24624.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu004]
 gi|308339379|gb|EFP28230.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu005]
 gi|308343255|gb|EFP32106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu006]
 gi|308347147|gb|EFP35998.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu007]
 gi|308351062|gb|EFP39913.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu008]
 gi|308355721|gb|EFP44572.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu009]
 gi|308359676|gb|EFP48527.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu010]
 gi|308363581|gb|EFP52432.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu011]
 gi|308367217|gb|EFP56068.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu012]
 gi|323721036|gb|EGB30100.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902391|gb|EGE49324.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           W-148]
 gi|328457279|gb|AEB02702.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 4207]
          Length = 335

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A +    +       GA IE IH  +L HDD+  MD   +RRG P+ 
Sbjct: 55  GGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSA 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + Q+    AI+AG+ LL  A  +++    +    I       +T          GQM + 
Sbjct: 113 NAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTFAQLVT----------GQMRET 162

Query: 168 Q--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   E +D  + ++ + + KTG+L+  A   G + + A+  + ERL   G  +G  FQ+A
Sbjct: 163 RGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIA 222

Query: 225 DD 226
           DD
Sbjct: 223 DD 224


>gi|311265743|ref|XP_003130800.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 1
           [Sus scrofa]
          Length = 410

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  + A+        E IH  SL+HDD+  +D+   RR
Sbjct: 128 GKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 185

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 186 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 243

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 244 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 297

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 298 FQLIDDVLD 306


>gi|311265745|ref|XP_003130801.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 2
           [Sus scrofa]
          Length = 421

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  + A+        E IH  SL+HDD+  +D+   RR
Sbjct: 139 GKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVHDDV--IDDASSRR 196

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 197 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 254

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 255 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIA 308

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 309 FQLIDDVLD 317


>gi|325003710|ref|ZP_08124822.1| trans-hexaprenyltranstransferase [Pseudonocardia sp. P1]
          Length = 330

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 16/185 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A +  +      +   A +E IH  +L HDD+  MD   +RRG  + 
Sbjct: 48  GGKRFRPLFTLLAAQVGPHPERDGVITAAAVVELIHLATLYHDDV--MDEAAMRRGAESA 105

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++D   AI+ G+ L  +A  +++       D +R   +++ T       ++ GQM + 
Sbjct: 106 NSRWDNSIAILTGDFLFAHASRLVADLG---PDAVR---IIAET----FAQLVTGQMRET 155

Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     +  V     +   KTG+L+  +   G + + A     E L  FG+ +G  FQ++
Sbjct: 156 RGPKPSDDPVEHYLRVVGEKTGSLIATSGRYGGMFSGAPTEHIEALHRFGDVIGTAFQIS 215

Query: 225 DDLLD 229
           DD++D
Sbjct: 216 DDIID 220


>gi|300779871|ref|ZP_07089727.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           genitalium ATCC 33030]
 gi|300533981|gb|EFK55040.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           genitalium ATCC 33030]
          Length = 386

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 11/225 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           QE ++R+   LD +       + + H+         A  GGK+ R  +    +   +   
Sbjct: 68  QELAERVAAGLDGVEKLMFERLSSGHDFLNEKVTHLAKAGGKRFRPMMAMLASEFGDQPQ 127

Query: 70  LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              +  GA I E +H  +L HDD+  MD    RRG  + + ++    AI++G+ LL  A 
Sbjct: 128 AENVVKGATIVEMVHLATLYHDDV--MDEAAKRRGVDSANARWTNTVAILSGDFLLAEAS 185

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            I+S   T    +        +T    ++  +G    D  + +++      + + KTG L
Sbjct: 186 RIMSEIDTATVAHFADTFSDLVTGQ--MRETVGPGEGDPVEHYLN------VIREKTGVL 237

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  A   GA  + A   +   L+  GE +G+IFQ+ DD++D   D
Sbjct: 238 IASAAFLGATHSGAKDEDVRTLKELGEAVGMIFQIVDDVIDIFSD 282


>gi|315640276|ref|ZP_07895393.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952]
 gi|315483938|gb|EFU74417.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952]
          Length = 326

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 15/161 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D   +RRG  ++  Q+    A+ AG+ L    F+++++  + +K
Sbjct: 78  EMLHTATLIHDDI--VDEAELRRGLSSIRSQFGNSVAVYAGDYLFVSCFKLMANYASSMK 135

Query: 140 DNIRSQLMLSLT-HNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACES 195
                    SL  H+  ++ +L G++  + + F ID +    ++ +  KT  L   +C  
Sbjct: 136 ---------SLQMHSKSMESILNGELGQMDNRFNIDLSVADYLEAISGKTAELFALSCAI 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GA  +  S+   E+    G  +G+ FQ+ DD+LD  +D  K
Sbjct: 187 GAYESGTSRKFAEQAGKIGLAIGMAFQIMDDILDYTQDQQK 227


>gi|50309433|ref|XP_454724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643859|emb|CAG99811.1| KLLA0E17183p [Kluyveromyces lactis]
          Length = 477

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 44/197 (22%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN---GLLTYAFEI 130
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +I +    A++AG+   G  T A   
Sbjct: 179 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNIAFTNKMAVLAGDFMLGRATVAISR 236

Query: 131 ISSPKT-----------------QLKDNI----------------RSQLMLSLT---HNI 154
           + +P+                  QLK+                         LT   + +
Sbjct: 237 LRNPEVVELVSNSIANLVEGEFMQLKNTAIDADHTTFNNGTQHIPPPPTKFELTEHEYRV 296

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRC 212
                  G  L   D+ +D    + + K  +KT AL+  +C + A+++       E    
Sbjct: 297 PTSSTTNGTQLS-HDQLVDMAFDYYLHKTYLKTAALISKSCRAAAVLSGVRDPIIEECYE 355

Query: 213 FGENLGIIFQLADDLLD 229
           FG+NLGI FQL DD+LD
Sbjct: 356 FGKNLGICFQLVDDMLD 372


>gi|296113380|ref|YP_003627318.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4]
 gi|295921074|gb|ADG61425.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4]
 gi|326559225|gb|EGE09656.1| solanesyl diphosphate synthase [Moraxella catarrhalis 46P47B1]
 gi|326559864|gb|EGE10264.1| solanesyl diphosphate synthase [Moraxella catarrhalis 7169]
 gi|326569650|gb|EGE19702.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC1]
 gi|326570131|gb|EGE20176.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC8]
 gi|326570869|gb|EGE20893.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC7]
 gi|326575988|gb|EGE25911.1| solanesyl diphosphate synthase [Moraxella catarrhalis CO72]
 gi|326576400|gb|EGE26309.1| solanesyl diphosphate synthase [Moraxella catarrhalis O35E]
          Length = 348

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A  L +     A+++ A  E +H  +L+HDD+  +D   +RRGKPT 
Sbjct: 65  GGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPTA 122

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +D  TA++ G+ L+  +F ++            + L L    + G   +  G++L +
Sbjct: 123 NATWDNPTAVLVGDYLIARSFNLLVG---------FNHLPLLKLFSDGTCDIAEGEVLQL 173

Query: 168 QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q +      E+    I   KT  L   A + GA +    +   + L  F  + G  FQ+ 
Sbjct: 174 QHQHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMI 232

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 233 DDVLDFSGD 241


>gi|215413281|ref|ZP_03421970.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
 gi|298526862|ref|ZP_07014271.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
 gi|298496656|gb|EFI31950.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
          Length = 350

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 24/223 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+  + L   A  I+  
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLRDALHATAVRIL-- 148

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AL    C  GA++A+A       L  FG  LG+ FQ  DDL+
Sbjct: 201 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243


>gi|320451263|ref|YP_004203359.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01]
 gi|320151432|gb|ADW22810.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01]
          Length = 314

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 18/217 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           R +  L +L+      ++  H D L++A      GGK+IR  LV   AS         + 
Sbjct: 12  RFEEALSELIASDVLFVRLIHQD-LVTA------GGKRIRPRLVF-LASRAIGGAPFEME 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-S 133
           +  A+E +H  +L+HDDL  +D+   RRGK     +Y    ++++G+ LL+    +I+ +
Sbjct: 64  LALAVELLHSATLLHDDL--IDDAETRRGKEAAFRRYGNAVSVLSGDFLLSRLLHVIAKT 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            + +L +   +Q+  +L+    LQ     Q+  ++D  ++  +   I   KT  LM  + 
Sbjct: 122 GRMELVERF-AQVAKTLSEGEVLQF----QVAALEDYSLENYE--RIITAKTAVLMELST 174

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           E  A++       +E L  FG   G  FQ+ DD LD 
Sbjct: 175 EGPALLKGVDGEVREALARFGLYYGQAFQMRDDYLDL 211


>gi|317509118|ref|ZP_07966745.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316252589|gb|EFV12032.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 338

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R         L        + + A A+E IH  +L HDD+  MD   +RRG P+ 
Sbjct: 54  GGKRFRPMFTVVAGQLGADERRGDVEIAASALELIHLATLYHDDV--MDEATMRRGVPSA 111

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-MLD 166
           ++Q+    AI+AG+ L   A  +I+   ++   +I +Q    L     LQ +LG Q   D
Sbjct: 112 NVQWGNQIAILAGDYLFARACGLIAKLGSE-ATSIVAQTFGELVTG-QLQEVLGAQGERD 169

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             + ++  T +F     KT +L+        +   A +  +++L   GE +G+ FQ+ADD
Sbjct: 170 KIEHYL--TVIFG----KTASLLGACGRLAGLAIRADRQVQDQLAVIGELVGMAFQIADD 223

Query: 227 LLD 229
           ++D
Sbjct: 224 IID 226


>gi|221195086|ref|ZP_03568142.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium
           rimae ATCC 49626]
 gi|221184989|gb|EEE17380.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium
           rimae ATCC 49626]
          Length = 365

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 14/202 (6%)

Query: 36  NDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  L   +R ++  GGK++R  LV       + +   AL V  AIE     +LIHDD+  
Sbjct: 47  NTYLYQPLRGFSATGGKRVRPALVLLATQAVHGDVEAALPVACAIEDFQSAALIHDDI-- 104

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            D   +RRG+P ++ +     AI  G+  L +    I    T   +  R +L+ +L   I
Sbjct: 105 ADKSELRRGEPCLYRRLGTGLAINVGDAALVHTIGRICHGNT-YDEATRLRLIDAL---I 160

Query: 155 GLQG-MLGGQMLDI---QDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            +Q   L GQ LD+   Q+   D T    +FM           +    GAI+   +  ++
Sbjct: 161 SMQEHTLEGQALDLGWTQENRWDITPDEYLFMATSKTAYYSAAYPLLCGAIVGGGTAEQR 220

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
             L+ FG   G+ FQL DDLL+
Sbjct: 221 SALKAFGLKAGLAFQLQDDLLN 242


>gi|215429394|ref|ZP_03427313.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           EAS054]
 gi|289752601|ref|ZP_06511979.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           EAS054]
 gi|289693188|gb|EFD60617.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           EAS054]
          Length = 335

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A +    +       GA IE IH  +L HDD+  MD   +RRG P+ 
Sbjct: 55  GGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSA 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + Q+    AI+AG+ LL  A  +++    +    I       +T          GQM + 
Sbjct: 113 NAQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTFAQLVT----------GQMRET 162

Query: 168 Q--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   E +D  + ++ + + KTG+L+  A   G + + A+  + ERL   G  +G  FQ+A
Sbjct: 163 RGTSENVDSIKQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIA 222

Query: 225 DD 226
           DD
Sbjct: 223 DD 224


>gi|117164674|emb|CAJ88220.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           ambofaciens ATCC 23877]
          Length = 380

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 50/213 (23%)

Query: 49  GGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R+     C    A+  + +    LRVGAA+E +   +L+HDD+  MD    RRG 
Sbjct: 65  GGKRLRTAFA--CCGWRAAGGSGDPAAVLRVGAALELLQACALVHDDV--MDGSLQRRGA 120

Query: 105 PTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           P +H++                +    A++AG+  L +A            D++ ++  L
Sbjct: 121 PALHVELARGHWAAGMHGSAETFGTSAAVLAGDLALVWA------------DDLLTETAL 168

Query: 149 SLTHNIGLQG--------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFA--CES 195
              H   L          M+ GQ LD+  +    + V     +  +K+ AL   A     
Sbjct: 169 GTPHGPRLHEEWRAMRTEMVAGQYLDLHAQAARSSGVDEALTVATLKS-ALYTVARPLAL 227

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           GA +A A +   E LR  G   G+ FQL DDLL
Sbjct: 228 GASLAGADEGTVEALRMAGRCAGLAFQLRDDLL 260


>gi|165970696|gb|AAI58696.1| Unknown (protein for IMAGE:9025778) [Rattus norvegicus]
          Length = 407

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGA-------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  + A         E IH  +L+HDD+  +D+   RR
Sbjct: 125 GKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVHDDV--IDDASSRR 182

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++SL   + ++ ++ G
Sbjct: 183 GKHTVNKVWGEQKAVLAGDLILSAASIALA--------RIGNTAVVSLLAQV-IEDLVRG 233

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 234 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 293

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 294 AFQLIDDVLD 303


>gi|302308079|ref|NP_984864.2| AER004Wp [Ashbya gossypii ATCC 10895]
 gi|299789285|gb|AAS52688.2| AER004Wp [Ashbya gossypii ATCC 10895]
          Length = 475

 Score = 61.6 bits (148), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 39/193 (20%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127
           R+   +E IH  SL+HDD+  +D+   RRGKP+ ++ +    A++AG+ LL  A      
Sbjct: 181 RLAEIVEMIHTASLLHDDV--IDHSGTRRGKPSGNVAFTNKMAVLAGDFLLGRATVSISR 238

Query: 128 ------FEIISSPKTQLKDNIRSQLMLSL------THNIGLQGMLGGQM---LDIQDEFI 172
                  E++S+    L +    QL  ++      T N G Q +        L + D  +
Sbjct: 239 LRNPEVVELVSNCIANLVEGEFMQLKNTVVDGDLETINNGTQQIPPASKTIPLPVHDYRV 298

Query: 173 DET------QVFMIQK----------MKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + T         MI+           +KT AL+  +C + A+++ A     +    FG+N
Sbjct: 299 NTTLASGISHEVMIETAFDYYLHKTYLKTAALISKSCRAAAVLSGARDPILDECYHFGKN 358

Query: 217 LGIIFQLADDLLD 229
           LGI FQL DD+LD
Sbjct: 359 LGICFQLVDDMLD 371


>gi|163781995|ref|ZP_02176994.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882527|gb|EDP76032.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 308

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 15/183 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +      +       AL +G  +E IH  SL+HDD+  +D    RRG+ + +
Sbjct: 33  GGKRLRPLITMLSCGMCGGEPEDALPLGVGLEYIHAASLLHDDV--VDGAKKRRGRESAN 90

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    A++ G+ +   A  + ++  T     I S+ ++ +            Q+L++ 
Sbjct: 91  LIFGNEVAVLTGDYMYAKALHLFATHGTIDMIRIVSRAVMDMAE---------AQVLELS 141

Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              E I E + F I   KT A++  AC S   +A    +E+ RL   G  +G  FQL DD
Sbjct: 142 RVGELITEEEYFQIIDGKT-AVLFGACVSVGGLAGGC-DEEGRLYEVGLRMGRAFQLIDD 199

Query: 227 LLD 229
           LLD
Sbjct: 200 LLD 202


>gi|227500381|ref|ZP_03930443.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius
           ATCC 35098]
 gi|227217444|gb|EEI82763.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius
           ATCC 35098]
          Length = 330

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 29/227 (12%)

Query: 17  DTILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHL 70
           + +++DL+++    ++      + +  L   I+ AL   GK IR+ L+  C SL     +
Sbjct: 12  ENLIEDLVIEIHQEIKNILGDYKSSQNLYDIIKDALRSSGKMIRTKLLI-CISLMGEEEI 70

Query: 71  TALRVG--AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +   +   AA+E  H  SLIHDD+  +D+  +RR   +   +Y +  A+ AG+ ++   F
Sbjct: 71  SDKIISQCAAVEITHLASLIHDDI--IDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVF 128

Query: 129 EIISSPK-----TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQK 182
             ++        + + D IR      +  N      L    +++  DE+ +         
Sbjct: 129 SYLAKKGYVEEISVIADTIRDMCNGEVGQN------LNKYKINVSTDEYFENIS------ 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            KT +     C  G+      + + E++  FG+NLG++FQL DDLLD
Sbjct: 177 GKTASFFKTVCYFGSKNCGFDRKDTEKMVRFGQNLGLMFQLKDDLLD 223


>gi|302814167|ref|XP_002988768.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii]
 gi|300143589|gb|EFJ10279.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii]
          Length = 304

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 8/196 (4%)

Query: 38  RLLSAIRY--ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L  AIRY  A   G+ + S  +  C  L   +   AL +   IE      L  DDLP M
Sbjct: 54  QLHKAIRYCTADEEGRHLASLCIAAC-ELVGGDRHAALPMACTIEMWMAIILTTDDLPCM 112

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   R+G+   H+++D+ TAI+A   L   AF  +        D    +L L    ++ 
Sbjct: 113 DNARTRKGRAAAHVEFDDTTAILAAQALAALAFGTVVDSTLVSTDK---RLRLVKEFSLS 169

Query: 156 LQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +Q ++ GQ  D++     ET  ++      KT +       +GAI+  A + E E LR F
Sbjct: 170 MQRLVYGQYDDVKKGESLETLEELNAKNTNKTSSFFELPLVAGAIVGGAGEEEIEGLRRF 229

Query: 214 GENLGIIFQLADDLLD 229
           G   G+++Q+ DDL D
Sbjct: 230 GRYFGLMWQVNDDLSD 245


>gi|268317461|ref|YP_003291180.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
 gi|262334995|gb|ACY48792.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
          Length = 332

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 22/219 (10%)

Query: 29  SHMQTQHNDRLLSAI-------RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
            H Q    D + +++       RY L   GK+IR  LV   A L         R  A +E
Sbjct: 26  KHFQRYFRDAMRTSVPLLDHVARYLLRQKGKRIRPLLVLLTAKLCGGITEATYRAAALVE 85

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +L+HDD+  +D    RRG  +++  +    A++ G+      F +         D
Sbjct: 86  LLHSATLVHDDV--VDGAEQRRGMFSINAIWKNKVAVLFGD------FLLSRG-LLLALD 136

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA 197
           +     + +L+  +  + M  G++L I+      IDE   F I   KT +L+    +SGA
Sbjct: 137 HRDYDTLHALSDAV--RRMSEGELLQIEKSRHLDIDEATYFRIISDKTASLIAACTKSGA 194

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + A       + +   GE LG+ FQ+ DDL D  E+  K
Sbjct: 195 LSATDDPRVIDEMYLMGEKLGLAFQIRDDLFDYGEEAGK 233


>gi|293342917|ref|XP_002725353.1| PREDICTED: rCG40823-like isoform 1 [Rattus norvegicus]
 gi|149028595|gb|EDL83936.1| rCG40823, isoform CRA_b [Rattus norvegicus]
          Length = 409

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGA-------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  + A         E IH  +L+HDD+  +D+   RR
Sbjct: 127 GKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVHDDV--IDDASSRR 184

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++SL   + ++ ++ G
Sbjct: 185 GKHTVNKVWGEQKAVLAGDLILSAASIALA--------RIGNTAVVSLLAQV-IEDLVRG 235

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 236 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 295

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 296 AFQLIDDVLD 305


>gi|194227087|ref|XP_001496103.2| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1
           [Equus caballus]
          Length = 379

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N +H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 97  GKAFRPIIVVLMARACNSHHDNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDARSRR 154

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 155 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 212

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 213 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 266

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 267 FQLIDDVLD 275


>gi|119094157|gb|ABL60987.1| geranylgeranyl pyrophosphate synthetase CrtE [uncultured marine
           bacterium HF10_19P19]
          Length = 338

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 17/186 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  +       F V    +L   AA+E +H  SL+HDD+   D   +RRG P+V  
Sbjct: 55  GKQLRGRMALAAGDSFGVPRTASLPWAAAVEVLHNASLVHDDI--CDGDMVRRGAPSVWA 112

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            Y   TA+  G+ L+  +FE+ +      +T    +I S+ M + T          GQ L
Sbjct: 113 FYGRDTALALGDWLIALSFELAAEAAYLGQTPQLVSILSRHMAATT---------AGQAL 163

Query: 166 DIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           + +     +   +M I   KT  L   + E  A +A   ++    L  F    G  +Q+A
Sbjct: 164 EFEVRAYPDWSGYMDISTGKTAPLFIASVEGIAHLA-GRRDAIRPLNRFFSAAGGCYQIA 222

Query: 225 DDLLDC 230
           +D+L+ 
Sbjct: 223 NDMLNV 228


>gi|83815330|ref|YP_445348.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
 gi|294507229|ref|YP_003571287.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8]
 gi|83756724|gb|ABC44837.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
 gi|294343557|emb|CBH24335.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8]
          Length = 355

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 23/188 (12%)

Query: 50  GKKIRSFLVTECA-----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GK+IR  LV   A     +  +  H    R  A +E +H  +L+HDD+  +D+   RRG 
Sbjct: 76  GKRIRPILVLLSAQACGGAATDQTH----RAAALVELLHTATLVHDDV--VDDAEERRGV 129

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            +++  +    A++ G+      F +       L  +  S L    T +  ++ M  G++
Sbjct: 130 FSINALWKNKIAVLLGD------FLLSRGLLLSLDHDDYSVLH---TLSDAVRRMSEGEL 180

Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           L I+      IDE   F I   KT +L+    +SGA+     +   ER+  FGE LG+ F
Sbjct: 181 LQIEKSRLLDIDEETYFRIISDKTASLISACTKSGAVSVTDDEALIERMDEFGETLGLAF 240

Query: 222 QLADDLLD 229
           Q+ DDL D
Sbjct: 241 QIRDDLFD 248


>gi|126666905|ref|ZP_01737881.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17]
 gi|126628621|gb|EAZ99242.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17]
          Length = 344

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 25/197 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G  +R+ L       F  +   A+   A  E IH  SL+HDDL  +D   +RRG+ TV  
Sbjct: 66  GSLLRARLALASCRSFECSQEYAVVAAACCELIHNASLVHDDL--LDGDQLRRGQATVWK 123

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++    A+ AG+ LL  AF + +      +  + +Q + ++T  +     + GQ ++I  
Sbjct: 124 RHGRGVALCAGDLLLCTAFAVSAGLDDAQQSRLLTQYLAAMTGRV-----IVGQSIEIAP 178

Query: 170 ----------EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                      +I+  Q       KT  L+     +GAI A A  +  + ++ F E +G+
Sbjct: 179 VEPGVQPRFRAYIEAAQA------KTVPLIQLPLMTGAIAAKAELSVLDSIKRFAEAVGL 232

Query: 220 IFQLADDLLDCEEDLPK 236
            +Q+ DDL D  E  PK
Sbjct: 233 AYQIIDDLDDLVE--PK 247


>gi|118475154|ref|YP_891862.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414380|gb|ABK82800.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 294

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 111/228 (48%), Gaps = 40/228 (17%)

Query: 14  KRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           +RID IL    D L    AS M +Q +             GKK+RS L+ + A       
Sbjct: 2   ERIDDILKEFVDSLNYPLASEMFSQVS------------SGKKLRSKLILKIAGA----S 45

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             + ++ + +E IH  SL+HDD+  +D+  IRRGKP+++  +    +I+ G+ L +  F 
Sbjct: 46  EASFKLSSVVEIIHLASLLHDDV--IDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGFN 103

Query: 130 IISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKT 185
            I     ++ D I   +  LS+           G+++D++    F  D+ +   +   KT
Sbjct: 104 EIVKFDMKIADIISDAVCKLSI-----------GELMDVELGSSFNADKEKYLKMIYFKT 152

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L+  A +S AI+A   +   ++   +G+NLG+ FQ+ DD+LD   D
Sbjct: 153 AVLIEAAAKSAAILAGFDE---QKYGDYGKNLGLAFQIVDDILDITSD 197


>gi|227833507|ref|YP_002835214.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184496|ref|ZP_06043917.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454523|gb|ACP33276.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 363

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 43/215 (20%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDN 97
           + L GGK+IR       A       L         LR   ++E I   +LIHDD+  +D 
Sbjct: 48  FVLDGGKRIRPLYA--WAGFIGARGLEGTESPQAMLRAATSLEFIQACALIHDDI--VDA 103

Query: 98  GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIIS----SPKTQ 137
              RRG PTVH                  + +  AI+ G+  L +A +++     SP+  
Sbjct: 104 SDTRRGNPTVHRGVAARHRELGFHGDADFFGQSLAILVGDMALVWAEDMLQDSGLSPEAL 163

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC-FAC 193
            +     + M         + ++GGQMLDI    +   D T    + + KT A       
Sbjct: 164 ARARAPWRAMR--------REVIGGQMLDICLEAEGSEDATLADSVNRFKTAAYTIERPL 215

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             GA +A A +      R +G+++G+ FQL DDLL
Sbjct: 216 HLGAAIAGAPEKLVAAFRGYGQDIGVAFQLRDDLL 250


>gi|218755158|ref|ZP_03533954.1| polyprenyl synthetase [Mycobacterium tuberculosis GM 1503]
 gi|289763564|ref|ZP_06522942.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503]
 gi|289711070|gb|EFD75086.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503]
          Length = 350

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 24/223 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+ TV   +    AI+ G+ L   A  I+  
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRSTVWSVWGVGGAILLGDALHATAVRIL-- 148

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            AL    C  GA++A+A       L  FG  LG+ FQ  DDL+
Sbjct: 201 AALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243


>gi|145219780|ref|YP_001130489.1| dimethylallyltranstransferase [Prosthecochloris vibrioformis DSM
           265]
 gi|145205944|gb|ABP36987.1| Dimethylallyltranstransferase [Chlorobium phaeovibrioides DSM 265]
          Length = 324

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 27/224 (12%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L  Q    +    N  +    RY L   GK+IR  +V   AS+      ++ R    +E 
Sbjct: 16  LFRQKYRELLRNQNSLVDKVTRYVLRQQGKQIRPVMVLLSASVAGGIRESSYRGAIMVEL 75

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT----YAFEIISSPKTQ 137
           +H  +LIHDD+  +D   +RRG  +++  +    +++ G+ LL+    Y+ E        
Sbjct: 76  LHSATLIHDDV--VDGAEMRRGIASINAIWKNKISVLIGDYLLSKGLLYSLES------- 126

Query: 138 LKDNIRSQLMLSLTHNI--GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
            KD           H +   ++ M  G++L IQ      I E     +   KT +L+  +
Sbjct: 127 -KD-------YGFLHIVSDAVRRMSEGEILQIQKTRSLDISEEDYIRVISDKTASLIASS 178

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           C  GA  A   + +   ++ +GE+LG+ FQ+ DD LD   D  K
Sbjct: 179 CAMGAESATEDEVKIAAMKKYGESLGLAFQIRDDTLDYTGDSRK 222


>gi|318041258|ref|ZP_07973214.1| solanesyl diphosphate synthase [Synechococcus sp. CB0101]
          Length = 323

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   +     +  LTA   R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLVSRALAADGELTARHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFRYDTG 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + +++++        KT +L+  +  +  +++    ++ + L  FG  LG+ FQ+ D
Sbjct: 162 QSFETYLEKSYC------KTASLIANSARAAGVLSGLPAHQLDELYRFGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|254777013|ref|ZP_05218529.1| GrcC1 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 335

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 29/227 (12%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + +++   RI+ ++D   L++A  + T+    L  A      GGK+ R       A +  
Sbjct: 20  ATVRDGVGRIEQLMD-TELRSADDIMTELLTHLFKA------GGKRFRPLFTVLSAQIGP 72

Query: 67  VNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 + + GA IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG+ L  
Sbjct: 73  DPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAGDYLFA 130

Query: 126 YAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM- 179
            A  ++S   P+  QL     +QL+              GQM + +   E  D  + ++ 
Sbjct: 131 TASRLVSRLGPEAVQLIAETFAQLVT-------------GQMRETRGRKEGSDPIEHYLK 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +   KT  L+  A   GA+ + A  ++ ERL   G  +G  FQ++DD
Sbjct: 178 VVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDD 224


>gi|158301264|ref|XP_320978.4| AGAP002069-PA [Anopheles gambiae str. PEST]
 gi|157012386|gb|EAA01051.4| AGAP002069-PA [Anopheles gambiae str. PEST]
          Length = 249

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D  + RRGKP+V++ +++     AG+    Y   ++S    +L+
Sbjct: 4   EMIHTASLVHDDV--IDQSFARRGKPSVNVLWNQQQVAQAGD----YILAVVSMMLARLQ 57

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESG 196
            N  + ++  +     L  ++ G+++ +  +  +  +    F     KT +L+  + ++ 
Sbjct: 58  HNDVTLILSEI-----LADLVQGELMQLDTKETENERFAHYFARSYRKTASLIANSLKAV 112

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A++    +   E    +G NLG+ FQL DDLLD
Sbjct: 113 AVLTGVGERTAEISFQYGRNLGLAFQLVDDLLD 145


>gi|313240927|emb|CBY33211.1| unnamed protein product [Oikopleura dioica]
          Length = 344

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 18/188 (9%)

Query: 49  GGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            GK IR  +V   A         +    +V    E IH  SL+HDD+  +D    RRGK 
Sbjct: 61  SGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGSLVHDDV--IDKSEERRGKA 118

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + + ++    A++AGN +++Y+ ++++S ++     I S++         ++ ++ G++ 
Sbjct: 119 SANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRI---------IEDLIYGELC 169

Query: 166 DIQDEFIDETQVF--MIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            ++    +    +   I+K  +KT +L+  + E+ A++     + ++    FG+ LGI F
Sbjct: 170 QLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHVQQAAFNFGKYLGIAF 229

Query: 222 QLADDLLD 229
           Q+ DD LD
Sbjct: 230 QIQDDRLD 237


>gi|226361079|ref|YP_002778857.1| polyprenyl diphosphate synthase [Rhodococcus opacus B4]
 gi|226239564|dbj|BAH49912.1| putative polyprenyl diphosphate synthase [Rhodococcus opacus B4]
          Length = 351

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 18/188 (9%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +A+  A  GGK+ R       A L    +  + +     +E +H  +L HDD+  MD   
Sbjct: 63  AALHLAKAGGKRFRPLFTVLTAQLGPKASDPSVVTAATVVELVHLATLYHDDV--MDEAS 120

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQ--LKDNIRSQLMLSLTHNIG 155
           +RRG P+ + ++    AI+AG+ L  +A  ++S+  P+    + +     +   +   IG
Sbjct: 121 MRRGAPSANARWGNSVAILAGDYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIG 180

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           L+G         QD          +   KTG+L+  +   G   + A  +  +RL   G+
Sbjct: 181 LRGE--------QDPV---EHYLKVVWEKTGSLIAASGRFGGTFSGADADHVKRLERLGD 229

Query: 216 NLGIIFQL 223
            +G  FQ+
Sbjct: 230 AVGTAFQI 237


>gi|293342919|ref|XP_002725354.1| PREDICTED: rCG40823-like isoform 2 [Rattus norvegicus]
          Length = 422

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 21/190 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGA-------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  + A         E IH  +L+HDD+  +D+   RR
Sbjct: 140 GKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVHDDV--IDDASSRR 197

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++         I +  ++SL   + ++ ++ G
Sbjct: 198 GKHTVNKVWGEQKAVLAGDLILSAASIALA--------RIGNTAVVSLLAQV-IEDLVRG 248

Query: 163 QMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           + L +   E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI
Sbjct: 249 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 308

Query: 220 IFQLADDLLD 229
            FQL DD+LD
Sbjct: 309 AFQLIDDVLD 318


>gi|313231697|emb|CBY08810.1| unnamed protein product [Oikopleura dioica]
          Length = 344

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 18/188 (9%)

Query: 49  GGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            GK IR  +V   A         +    +V    E IH  SL+HDD+  +D    RRGK 
Sbjct: 61  SGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGSLVHDDV--IDKSEERRGKA 118

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + + ++    A++AGN +++Y+ ++++S ++     I S++         ++ ++ G++ 
Sbjct: 119 SANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRI---------IEDLIYGELC 169

Query: 166 DIQDEFIDETQVF--MIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            ++    +    +   I+K  +KT +L+  + E+ A++     + ++    FG+ LGI F
Sbjct: 170 QLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHVQQAAFNFGKYLGIAF 229

Query: 222 QLADDLLD 229
           Q+ DD LD
Sbjct: 230 QIQDDRLD 237


>gi|193084129|gb|ACF09795.1| octaprenyl-diphosphate synthase [uncultured marine group III
           euryarchaeote SAT1000-53-B3]
          Length = 325

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 25/232 (10%)

Query: 7   SKLQEN---SKRIDTILDDLLLQTASHMQ---TQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++L+EN   S+ ++    ++  +   HM+   ++ +  L   I   +  GK++R  L   
Sbjct: 5   TRLKENLIISENLNDYYKEVRAEFQRHMKREISKESKDLAPLIEKGVGDGKQLRPVLCRL 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +     +   A   G A+E IHC +LIHDD   +D    RR  P +  +    TA++  
Sbjct: 65  VSDSLGGDAHLAFECGMALELIHCGTLIHDDW--LDGDKFRREAPALWKELGPRTAVLVA 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQVF 178
           + ++                ++   + L+   ++    + +  G + D  D+      V+
Sbjct: 123 DLMIATG-------------SLHGAISLATGKSLARCARNLTEGAIADFTDKENYSESVY 169

Query: 179 MIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + + K KTGAL   A E GA+++  + +    +  FGE +GII+Q+ DD LD
Sbjct: 170 LHRIKKKTGALYSTAAELGALISPRT-DLALPMHKFGETVGIIYQITDDYLD 220


>gi|13383251|dbj|BAB39476.1| putative GGPP synthase 1 [Youngia japonica]
          Length = 126

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT HI Y E  A++AG+ LL+++FE +++    +  +   + +  L   IG 
Sbjct: 1   NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHLATATKGVSSDRILRAIGELAKCIGS 60

Query: 157 QGMLGGQMLDIQDEFIDETQV-FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++DI           F +    +  AL+  +   GAIM   S  E E+LR F 
Sbjct: 61  EGLVAGQVVDICSRRRRCRIRPFGVYPFTQDAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120

Query: 215 ENLGII 220
            ++G++
Sbjct: 121 RSIGLL 126


>gi|256394108|ref|YP_003115672.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360334|gb|ACU73831.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 346

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 11/182 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L    A     +   A+ V  A+E +H +SL+HDD+  MD    RR +PT   
Sbjct: 62  GKAIRPALTLLTARAVGGSAEAAVPVAVAVELVHNFSLLHDDV--MDADLTRRHRPTAWS 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +    AI+AG+ LL  A  +++     + D     +            +  GQ  D+  
Sbjct: 120 VFGISQAILAGDALLAVANRLLAQEPAPVCDRGAEWIGTCCVE------LCAGQWSDMDF 173

Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            Q   +  ++V  +   KTGAL+  AC  GA+    +     RL  FG  LG+ FQ  DD
Sbjct: 174 EQRADVSVSEVLAMAAGKTGALLGCACALGALAGGGTPAAAGRLDAFGRKLGLAFQYVDD 233

Query: 227 LL 228
           LL
Sbjct: 234 LL 235


>gi|294631343|ref|ZP_06709903.1| polyprenyl synthetase [Streptomyces sp. e14]
 gi|292834676|gb|EFF93025.1| polyprenyl synthetase [Streptomyces sp. e14]
          Length = 383

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 13/154 (8%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H ++L+HDD+  MD    RR +PTV   + +  AI+AG+ L   A  +++       
Sbjct: 129 ELVHNFTLLHDDV--MDRDTTRRHRPTVWTVFGDADAILAGDALQALALRLLAEDPHPAA 186

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACE 194
               ++L   +        +  GQ  D   E    T+V + +     + KTGAL+  AC 
Sbjct: 187 PAAAARLAACVVE------LCAGQHADTALESRAPTEVTLAEVLAMAEAKTGALLGCACA 240

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            G + A A++ E   L  FG   G+ FQL DD++
Sbjct: 241 VGGLYAGAAEEEVRALDAFGRQAGLAFQLIDDVI 274


>gi|154148638|ref|YP_001406457.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter hominis ATCC BAA-381]
 gi|153804647|gb|ABS51654.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter hominis ATCC BAA-381]
          Length = 297

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 20/169 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           +L++ A +E IH  SL+HDD+  +D   IRRG P+++  +    A++ G+   + AF  +
Sbjct: 48  SLKLCAIVELIHAASLLHDDV--IDESDIRRGNPSINAVFGSKNAVMLGDIFYSKAFFEL 105

Query: 132 SSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ-KMKTGA 187
            S    +   I + +  LS+           G+++D++  + F    + ++     KT  
Sbjct: 106 CSFNDFISKTISNAVFKLSI-----------GELMDVKMSENFNKNRENYLTMIYYKTAG 154

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+    + GA +A++   + E+   +G+NLG+ FQ+ DD+LD  +D  K
Sbjct: 155 LIESVAKIGAFLANS---DCEKFAEYGKNLGLAFQIIDDILDITQDSKK 200


>gi|62391012|ref|YP_226414.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326351|emb|CAF20513.1| PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Corynebacterium
           glutamicum ATCC 13032]
          Length = 366

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 40/214 (18%)

Query: 45  YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR       FL  +     +    + L   A++E I   +LIHDD+  +D+ 
Sbjct: 50  FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 107

Query: 99  YIRRGKPTVH--IQYDE--------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH  ++ D                 +I+AG+  L +A ++       L+D+ 
Sbjct: 108 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDM-------LQDSG 160

Query: 143 RSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFM---IQKMKTGAL-MCFACE 194
            S   L+ T +   +GM    +GGQ+LDI  E      V +   + + KT A  +     
Sbjct: 161 LSAEALARTRD-AWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 219

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +A  S    + L  +G ++GI FQL DDLL
Sbjct: 220 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLL 253


>gi|118463064|ref|YP_883710.1| polyprenyl synthetase [Mycobacterium avium 104]
 gi|118164351|gb|ABK65248.1| polyprenyl synthetase [Mycobacterium avium 104]
          Length = 325

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 29/227 (12%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + +++   RI+ ++D   L++A  + T+    L  A      GGK+ R       A +  
Sbjct: 10  ATVRDGVGRIEQLMD-TELRSADDIMTELLTHLFKA------GGKRFRPLFTVLSAQIGP 62

Query: 67  VNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 + + GA IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG+ L  
Sbjct: 63  DPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAGDYLFA 120

Query: 126 YAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM- 179
            A  ++S   P+  QL     +QL+              GQM + +   E  D  + ++ 
Sbjct: 121 TASRLVSRLGPEAVQLIAETFAQLVT-------------GQMRETRGRKEGSDPIEHYLK 167

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +   KT  L+  A   GA+ + A  ++ ERL   G  +G  FQ++DD
Sbjct: 168 VVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDD 214


>gi|332294868|ref|YP_004436791.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM
           14796]
 gi|332177971|gb|AEE13660.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM
           14796]
          Length = 314

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 16/190 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   A   N +    ++  A +E IH  +LIHDD+  +D   +RRG  +V+
Sbjct: 43  GGKRIRPTLVFLSALCVNQDIEKVIKYAAVVEGIHLATLIHDDV--IDESNVRRGILSVN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +Y    AI++G+ +L      +S  + +    + +++++ +           G+++  +
Sbjct: 101 GKYGFKVAILSGDFILAKITHFLSLLENKEPVRLMAEVIMRMAE---------GEVMQQE 151

Query: 169 DEF-IDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D F I   + ++I+   KT  L+  +   G+I     +N       FG NLGI FQ+ DD
Sbjct: 152 DLFKIVSIERYIIRCTNKTARLISSSAFLGSIDVLDKRN---IFAEFGLNLGIAFQIIDD 208

Query: 227 LLDCEEDLPK 236
           +LD   ++ K
Sbjct: 209 ILDFTGEVKK 218


>gi|323359581|ref|YP_004225977.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
 gi|323275952|dbj|BAJ76097.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
          Length = 355

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 36/224 (16%)

Query: 34  QHND---RLLSAIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSL 87
           QH D    L SAIR A  GGK+ R  LV       +   +      +V AA E +H   +
Sbjct: 31  QHGDGARALASAIRRAAEGGKRFRPLLVVSAFDTLDGPDIARPALYQVAAAFELLHTAFV 90

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDE-----------------VTAIIAGNGLLTYAFEI 130
           +HDD+  +D+   RRG P V  ++                      I+AG+ LL  A  +
Sbjct: 91  VHDDV--IDHDVERRGMPNVGGEFRSRGTERGADAAGAALLGDAAGILAGDLLLHEAARL 148

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTG 186
           ++    ++  ++R +L+L +   + +     G++ D+++      ID   +      KT 
Sbjct: 149 VA--MAEIPTDLRRELLLLVEDAVLVSA--AGELADVENAVSAGDIDADTILRTTHDKT- 203

Query: 187 ALMCFAC--ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A+  F+   E+GA++A A    +  L+ FG+ LG+ +QL DDL+
Sbjct: 204 AVYSFSAPLEAGAVLAGAEAPVRHALQRFGQRLGLAYQLVDDLI 247


>gi|302560949|ref|ZP_07313291.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
 gi|302478567|gb|EFL41660.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
          Length = 354

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 17/188 (9%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A  GGK++R  LV   A   +       +     E +H  SL HDD+  +D   +R G  
Sbjct: 71  AATGGKRMRPLLVLLAAEFGDPGSEGVAQAAVVAELVHLASLYHDDV--VDRAAVRHGAA 128

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML-SLTHNIGLQGMLGGQM 164
           + +  +    A   GN LL     + +       D +   L L + T N     ++ GQ+
Sbjct: 129 SANALWGNRAAAQGGNWLLARGARLSA-------DLVPDALALNARTANR----IVEGQL 177

Query: 165 LDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           L++         V   F +   KT AL+  +   GA  A A +   + L  +GE LG+ F
Sbjct: 178 LELVGPEPGADPVAHYFRVAAGKTAALLAMSLGVGAFQAGAPRAAADALVEYGEQLGLAF 237

Query: 222 QLADDLLD 229
           Q+ADDLLD
Sbjct: 238 QIADDLLD 245


>gi|148239374|ref|YP_001224761.1| prenyl transferase [Synechococcus sp. WH 7803]
 gi|147847913|emb|CAK23464.1| Prenyl transferase [Synechococcus sp. WH 7803]
          Length = 323

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     LV+   S          R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLVSRALSPEGELSPRHRRLAEITEMIHTASLVHDDV--VDEAGTRRGVE 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFRYDTG 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + +++++        KT +L+  +  +  +++  ++ + E L  +G  LG+ FQ+ D
Sbjct: 162 QTFETYLEKSYC------KTASLVANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|332637102|ref|ZP_08415965.1| trans-hexaprenyltranstransferase, component II [Weissella cibaria
           KACC 11862]
          Length = 329

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 13/188 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R          F       L + A +E +H  SL+HDD+  +D+   RR   +V 
Sbjct: 51  GGKLLRPAFTILIGRFFPAEREPLLNLAATVEMLHTASLVHDDI--IDDSPKRRHAESVQ 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++ +  A   G+ L    F         L DN     ++ +     L+ +L G++    
Sbjct: 109 SRFGKDVAAYTGDYLFAVTFRT-------LADNTNDINVVRMATRY-LERILSGELTQRT 160

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + +  +  +   +     KT AL   A   G   +HA ++  +    F  N+G+ FQ+ D
Sbjct: 161 NHYKRDMTIANYEDQIAGKTAALFVLAANLGIAASHAPKDFADLATDFAYNVGMAFQILD 220

Query: 226 DLLDCEED 233
           DLLD   D
Sbjct: 221 DLLDYSAD 228


>gi|217077572|ref|YP_002335290.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B]
 gi|217037427|gb|ACJ75949.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B]
          Length = 338

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 37/239 (15%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---NVNHL 70
           K+++  ++ ++L+   +   Q    + + I Y L  GK+IR  L    A+ +    +++ 
Sbjct: 12  KKVEEYIEKVILENKVNPPKQIESLIRTLIEYCLRPGKRIRPLLFLLGATSYAKKELDYE 71

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-YDEVT------------AI 117
              R+ A IE +HC+ LIHDD+  MD   +RRG P++H+  Y+E              A+
Sbjct: 72  KLYRIAAVIEIMHCFLLIHDDI--MDRSALRRGLPSLHVVFYEEFKEKNNNEKIGEDLAL 129

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---NIGLQGMLGGQMLDIQDEF--- 171
           + G+ L   A   +S      K N+ S+ +   ++   N G      GQ LD+       
Sbjct: 130 VFGDILFFIAIRQLS------KLNLSSKFLEEFSNCYINTGY-----GQTLDVLYSLGKY 178

Query: 172 -IDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             DE ++ + I ++KT     F      ++      +K+++       GI FQ+ DD++
Sbjct: 179 KPDEDKISVEIARLKTAYYTFFYPFYLGVLLSNENIDKKKIEDAIIPAGIAFQIRDDII 237


>gi|297563839|ref|YP_003682812.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848288|gb|ADH70306.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 768

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+  +R+   G G+  RS++      LF V+      + AA E +H  SLI DD+   D 
Sbjct: 451 LVGPVRHTTAGLGRSWRSYVSMAAIELFGVDSEPYRPLVAAAELLHTGSLIVDDVE--DR 508

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+P  H+ + E  A+ AG       F +       L D+   +L +   +   L+
Sbjct: 509 SPLRRGRPAAHVVFGEAVAVNAGTAAY---FALDRVLNRVLPDDAALRLRVYQVYLRVLR 565

Query: 158 GMLGGQMLDI------QDEFIDETQVFMIQK-------MKTGALMCFACESGAIMAHASQ 204
              GGQ +DI       DE ++      + +       +KT A +    E GA++A A +
Sbjct: 566 AGHGGQAIDIAGHRAAMDEAVETGDAEALLRRVRSGHWLKTAAPVRGLAEIGALVAGARE 625

Query: 205 NEKERLRCFGE---NLGIIFQLADDLLD 229
              E+ R  GE    +G+ +Q++DD++D
Sbjct: 626 ---EQFRALGEYFDAVGLAYQISDDVMD 650


>gi|300711739|ref|YP_003737553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
 gi|299125422|gb|ADJ15761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
          Length = 354

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 23/207 (11%)

Query: 38  RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           R LS   + LL  GGK+ R+ +       F  +    L      E +H  ++I DD+   
Sbjct: 47  RALSDPIWDLLDRGGKRWRAVVCLLLLDGFGADPRAYLPYACIPEVLHNGTIIVDDV--E 104

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS------PKTQLKDNIRSQLMLS 149
           D   IRRG+P +H ++    A+ AGN +     ++I        P+TQL         L+
Sbjct: 105 DGAEIRRGEPALHHRFGPDIALNAGNAMYFLPLKVIGKNPADLDPETQLATYEMLMDELN 164

Query: 150 LTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            TH         GQ +DI     +D  + E +   +   KTG L        AI+     
Sbjct: 165 RTHL--------GQGMDIYWHRNRDATVAEAEYLEMCACKTGCLGRIVARLAAIITDQPP 216

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
             +  +  + E++ I FQ+ DD+LD E
Sbjct: 217 EVEREVAAYAEDMSIAFQIGDDILDVE 243


>gi|23308904|ref|NP_601376.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|21324942|dbj|BAB99565.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 371

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 40/214 (18%)

Query: 45  YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR       FL  +     +    + L   A++E I   +LIHDD+  +D+ 
Sbjct: 55  FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 112

Query: 99  YIRRGKPTVH--IQYDE--------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH  ++ D                 +I+AG+  L +A ++       L+D+ 
Sbjct: 113 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDM-------LQDSG 165

Query: 143 RSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFM---IQKMKTGAL-MCFACE 194
            S   L+ T +   +GM    +GGQ+LDI  E      V +   + + KT A  +     
Sbjct: 166 LSAEALARTRD-AWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 224

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +A  S    + L  +G ++GI FQL DDLL
Sbjct: 225 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLL 258


>gi|86739265|ref|YP_479665.1| polyprenyl synthetase [Frankia sp. CcI3]
 gi|86566127|gb|ABD09936.1| Polyprenyl synthetase [Frankia sp. CcI3]
          Length = 338

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 24/220 (10%)

Query: 20  LDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
           ++DLL   +++ S   T+ +  L+ A      GGK+ R  +V   A   +   +  +   
Sbjct: 28  VEDLLRESVRSESAFVTETSRHLVDA------GGKRFRPIVVLLAAQFADPEAVGVVPAA 81

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H  +L HDD+  MD    RRG  + + ++    AI+ G+ L   A +I +    
Sbjct: 82  VAIELTHLSTLYHDDV--MDEAPRRRGAASANTRWTNTVAILTGDYLFARASDITA---- 135

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFAC 193
               ++  +    L   I    +  GQ+ +       +  V     +   KT +L+  + 
Sbjct: 136 ----DLGPEATRILARTIAT--LCEGQIRETVGPAPGQDPVEHYLRVITDKTASLIATSG 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             GA++A A     + L  FGE  G+ FQL+DD++D   D
Sbjct: 190 RLGAMLAGADPITVDTLATFGELFGVAFQLSDDIIDVASD 229


>gi|239978074|ref|ZP_04700598.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 390

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 22/152 (14%)

Query: 44  RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           R+  LGG+++R     + +  CA         ALRVGAA+E +   +L+HDD+  MD+  
Sbjct: 77  RFTSLGGRRLRPALLWWALRACALPDGDRARAALRVGAAVELLQTCALVHDDV--MDSSR 134

Query: 100 IRRGKPTVHI----QYDE--------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +RRG+P +H+    QY            A++AG+  L +A + ++  +T+L D +R ++ 
Sbjct: 135 LRRGRPALHVSLADQYGAAGTDLFAGAAAVLAGDLALAWAEDTLA--ETELPDPVRRRVR 192

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
                  G   M+ GQ LD+  +   +    +
Sbjct: 193 AVWRVMRGE--MVAGQYLDLHGQVTADRSALL 222


>gi|297153619|gb|ADI03331.1| hypothetical protein SBI_00210 [Streptomyces bingchenggensis BCW-1]
          Length = 466

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 14/147 (9%)

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D+  +RRG+ T + +Y +  A++ G+ LL    +  +S        + +  M+S+    
Sbjct: 2   IDDAQVRRGRSTTNAKYGDAIALLTGDYLLARCMQAAAS--------LGASPMMSMAET- 52

Query: 155 GLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            L  +  GQML+   + D    E         KT  LM  A   GA+  +AS + ++ L 
Sbjct: 53  -LIDVCVGQMLESSQLFDPLRTEEDYLTAVSGKTARLMRTATTMGALQCNASNDVQDALE 111

Query: 212 CFGENLGIIFQLADDLLD-CEEDLPKK 237
            FG NLG+ FQ+ DD+LD C E+  K+
Sbjct: 112 SFGHNLGMAFQIWDDILDICSEETGKQ 138


>gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
 gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
          Length = 364

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 6/197 (3%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  ++RY++L GGK++R  L      L       A+ V  A+E +H  SLIHDD+P MD+
Sbjct: 98  LRESMRYSVLAGGKRLRPALAIAACELVGGPAAAAVPVACAVEMMHTASLIHDDMPCMDD 157

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIG 155
             +RRG+P+ H+ + E TA+++G+ LL  AFE +  +S    +  +   + +L L    G
Sbjct: 158 DPLRRGRPSNHVAFGEPTALLSGDALLALAFEHVARASAGAGVPADRALRAVLELGSAAG 217

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRC 212
           + G+  GQ+ D+  +      +  ++ +   KT  L+  A  SGA++      E ER+R 
Sbjct: 218 VGGIAAGQVADMASQGASSGSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRR 277

Query: 213 FGENLGIIFQLADDLLD 229
           +   LG++ Q+ DD+LD
Sbjct: 278 YAHFLGLLLQVVDDVLD 294


>gi|239928074|ref|ZP_04685027.1| putative polyprenyl diphosphate synthase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 341

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 19/186 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +      +      E +H  SL HDD+  +D+  IR G  + +
Sbjct: 61  GGKRLRPLLVLLGAEFGDPEGEGVVDAAVLAELVHVSSLYHDDV--IDDAGIRHGADSAN 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++    A+ AG+ LL  A ++  +  P+    + + +  ++             GQ L+
Sbjct: 119 ARWGNRRAVFAGDWLLAQAAQLSCALGPRAVRLNAVTADRLVR------------GQALE 166

Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +         +     +   K+ +L+  + + GA+ A A +   + L  +GE LG+ FQ+
Sbjct: 167 LLGPGPGTAPLDHYLRVTAGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGLAFQM 226

Query: 224 ADDLLD 229
           +DD+LD
Sbjct: 227 SDDILD 232


>gi|255325357|ref|ZP_05366463.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141]
 gi|255297922|gb|EET77233.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141]
          Length = 359

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 37/211 (17%)

Query: 45  YALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + L GGK++R          A     + +  LR  A++E I   +LIHDD+  +D    R
Sbjct: 46  FVLDGGKRVRPTYAWAGYLAAGRGEEDPVAMLRAAASLEFIQACALIHDDI--IDASNTR 103

Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           RG PTVH   +++                 AI+ G+  L YA ++        +D+  S 
Sbjct: 104 RGNPTVHRGVEKLHRESEYLGDPEFFGTSVAILVGDLALVYAEDM-------FQDSGLSA 156

Query: 146 LMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GA 197
             L    +   +GM    +GGQ+LDI  E      V +   +       +  E     GA
Sbjct: 157 AALHRARSP-WRGMRTEVIGGQLLDISLEAAGSESVELANSVNRYKTAAYTIERPLHLGA 215

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             A AS+      R +G ++GI +QL DD L
Sbjct: 216 ATAGASEELIAAFRGYGHDIGIAYQLRDDQL 246


>gi|332708306|ref|ZP_08428286.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L]
 gi|332352910|gb|EGJ32470.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L]
          Length = 323

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 19/188 (10%)

Query: 49  GGKKIRS--FLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R    L+   A++ N + +T    R+    E IH  SL+HDD+  +D   +RR  
Sbjct: 44  GGKRLRPAIVLLVSRATITN-SKITPRHRRLAEITEMIHTASLVHDDV--IDESDVRRTV 100

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PTV+  ++   A++AG+ L   +   +++      DN+    +LS      ++ M  G++
Sbjct: 101 PTVNSLFNNRIAVLAGDFLFGQSAWYLAN-----LDNLEVVKLLSEV----IKDMAEGEI 151

Query: 165 LDIQDEFIDETQV--FMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                 F   T +  ++ +   KT +LM  + ++   ++  S    E L  +G NLG+ F
Sbjct: 152 QQGLSRFDTTTTIEGYLAKTYNKTASLMANSAKAAGCLSGVSDQVAENLYHYGRNLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QIVDDILD 219


>gi|209879225|ref|XP_002141053.1| hexaprenyl pyrophosphate synthetase [Cryptosporidium muris RN66]
 gi|209556659|gb|EEA06704.1| hexaprenyl pyrophosphate synthetase, putative [Cryptosporidium
           muris RN66]
          Length = 505

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 49/190 (25%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D   IRRGK + H+++    AI+ G+ L + A   ++     
Sbjct: 213 ALEMIHIASLLHDDI--VDESDIRRGKTSTHLKFGNKIAILTGDFLFSRACHSVA----- 265

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE---------------TQVFMI 180
             +NI +   +SL     ++G++ G++L   D  EF+DE               TQ+ + 
Sbjct: 266 FLENINAMKHVSLI----VEGLVRGELLQYNDLREFLDEIKENLDEMKNQNSTTTQIDIF 321

Query: 181 QKMKTGALMCFACESGAIMAHA------------SQN---------EKERLRCFGENLGI 219
            K     L     ++ ++M+H             S N         +K+ +   G N GI
Sbjct: 322 NKYMKNYLSKIYYKTASLMSHGVSACVEVNGMQQSSNLIGNELFNIKKKTIFNIGLNFGI 381

Query: 220 IFQLADDLLD 229
            FQL DDLLD
Sbjct: 382 AFQLLDDLLD 391


>gi|297158616|gb|ADI08328.1| putative polyprenyl diphosphate synthase [Streptomyces
           bingchenggensis BCW-1]
          Length = 379

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 26/197 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A        TA+    A+E IH +SL+HDD+  MD    RR + +V  
Sbjct: 83  GKGVRQALAVLGAEAAGAPGTTAVAGAVAVELIHAFSLLHDDI--MDGDETRRRRASVWK 140

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQM 164
            Y    A++AG+ L   A + ++ SP       IR            L G LG    GQ 
Sbjct: 141 AYGTGPAVLAGDALFALAVQTLAESPGPHGGAAIRQ-----------LSGALGDLVRGQA 189

Query: 165 LDI--------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            D+          + +   +   + + KTGAL+  A   GA +A A +     L   G +
Sbjct: 190 EDLLFESRPWTGPDAVRTAEYRAMAEGKTGALLGCAAALGAQLAGAPEPVVAALDRAGRH 249

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQ  DDLL    D
Sbjct: 250 VGVAFQAVDDLLGIWGD 266


>gi|312881852|ref|ZP_07741623.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370498|gb|EFP97979.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 297

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 10/181 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GG K R+ L  + A  FN +H TAL +  ++E +H  SLIHDD+   D    RR +  + 
Sbjct: 49  GGSKRRALLCYDTARSFNHSHQTALLLACSVELLHNASLIHDDI--QDQDMTRRDQAALW 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++     AI  G+ L+  A+  +     QL   I ++ ++ L  ++ +   + GQM DI 
Sbjct: 107 VKSSVAEAICVGDSLIAAAYMALG----QLA--IFNEKLIPLV-SLRVMQTIKGQMSDIG 159

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 +    + K K   L+  + E  +++A++S    E+L    E   I +Q  DD+ 
Sbjct: 160 QGQFSRSSYTDVAKEKAAPLLRLSVELPSLLANSSII-GEKLAEAAELFAIAYQFNDDIS 218

Query: 229 D 229
           D
Sbjct: 219 D 219


>gi|291436410|ref|ZP_06575800.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC
           14672]
 gi|291339305|gb|EFE66261.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC
           14672]
          Length = 338

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 19/186 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +      +      E +H  SL HDD+  +D+  IR G  + +
Sbjct: 58  GGKRLRPLLVLLGAEFGDPEGEGVVDAAVLAELVHVSSLYHDDV--IDDAGIRHGADSAN 115

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            ++    A+ AG+ LL  A ++  +  P+    + + +  ++             GQ L+
Sbjct: 116 ARWGNRRAVFAGDWLLAQAAQLSCALGPRAVRLNAVTADRLVR------------GQALE 163

Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +         +     +   K+ +L+  + + GA+ A A +   + L  +GE LG+ FQ+
Sbjct: 164 LLGPGPGTAPLDHYLRVTAGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGLAFQM 223

Query: 224 ADDLLD 229
           +DD+LD
Sbjct: 224 SDDILD 229


>gi|145296134|ref|YP_001138955.1| hypothetical protein cgR_2054 [Corynebacterium glutamicum R]
 gi|140846054|dbj|BAF55053.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 366

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 40/214 (18%)

Query: 45  YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR       FL  +     +    + L   A++E I   +LIHDD+  +D+ 
Sbjct: 50  FVLNGGKRIRPLYAWAGFLAAQGLKNSSERLESVLDAAASLEFIQACALIHDDI--IDSS 107

Query: 99  YIRRGKPTVH--IQYDE--------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH  ++ D                 +I+AG+  L +A ++       L+D+ 
Sbjct: 108 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDM-------LQDSG 160

Query: 143 RSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFM---IQKMKTGAL-MCFACE 194
            S   L+ T +   +GM    +GGQ+LDI  E      V +   + + KT A  +     
Sbjct: 161 LSAEALARTRD-AWRGMRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 219

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +A  S    + L  +G ++GI FQL DDLL
Sbjct: 220 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLL 253


>gi|223996715|ref|XP_002288031.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana
           CCMP1335]
 gi|220977147|gb|EED95474.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana
           CCMP1335]
          Length = 320

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 20/167 (11%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL HDD+  +D    RRG+P  H  +    AI+AG+ LL  A   ++ 
Sbjct: 62  RLAEITEMIHTASLFHDDV--IDEADTRRGQPAAHRAFGNKMAILAGDYLLARASICLA- 118

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM-KTGALMC 190
              +L++    + M ++     ++ ++ G++L I+D    + + + ++ +   KT +LM 
Sbjct: 119 ---RLRNVDVVECMSTV-----IEHLVRGEVLQIKDNRTGVPDMEGYLRKNFYKTASLMA 170

Query: 191 FACESGAIMAHASQNEK------ERLRCFGENLGIIFQLADDLLDCE 231
            +C+S A++  ++          E    +G+++G+ FQL DD LD E
Sbjct: 171 NSCKSAALLGASANGSGISPVVVEAAYLYGKHIGVAFQLIDDALDFE 217


>gi|62898389|dbj|BAD97134.1| trans-prenyltransferase variant [Homo sapiens]
          Length = 415

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDVSSRR 190

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     LQ  LG 
Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQ--LGS 248

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +      E  +E     ++K   KT +L+  +C++ +++        E    +G+++GI 
Sbjct: 249 K------ENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKDVGIA 302

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 303 FQLIDDVLD 311


>gi|259047925|ref|ZP_05738326.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175]
 gi|259035422|gb|EEW36677.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175]
          Length = 325

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 21/201 (10%)

Query: 42  AIRYALL-----GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           AI+ A+L     GGK +R ++L+       N N    L + AA+E +H  +L HDD+  +
Sbjct: 35  AIKDAILSVLDSGGKMVRPAYLILFSMWNDNRNKEEVLAIAAALELLHVATLFHDDV--I 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRG+ T+  +     AI AG+ LLT  ++++SS     KD +  Q+  S     G
Sbjct: 93  DESSVRRGQETISAKLGNRVAIYAGDYLLTVCYQLLSSYS---KDLVNIQIPTS-----G 144

Query: 156 LQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRC 212
           +  ++ G++  +++ + +D T    ++++  KT  L   +C  G     +   E+ R R 
Sbjct: 145 MMQVIQGELSQMEERYRLDVTVQDYLKRIEGKTAQLFMLSCVMGE--QFSVLKEEARARQ 202

Query: 213 FGENLGIIFQLADDLLDCEED 233
            G  +G+ FQ+ DD+LD E D
Sbjct: 203 IGHAIGMSFQILDDILDYEID 223


>gi|284928810|ref|YP_003421332.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A]
 gi|284809269|gb|ADB94974.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A]
          Length = 323

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 21/189 (11%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK IR     LV++   L         R+    E IH  SL+HDD+  +D   +RR  P
Sbjct: 44  GGKHIRPAIVLLVSKATMLEGDITPHHRRLAEITEMIHTASLVHDDI--VDEAVLRRNVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQ 163
           TV+  +D   A++AG+ L   +   +++      DN++   +LS       +G +  G  
Sbjct: 102 TVNSLFDNRIAVLAGDFLFAQSSWYLAN-----LDNLQVVKLLSEVIRDFAEGEISQGIN 156

Query: 164 MLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             D     D ++D++        KT +L+  + +S  I++++S +    +  +G  LG+ 
Sbjct: 157 RFDTSLTLDSYLDKSY------YKTASLIANSAKSATILSNSSLDIINSIYTYGRCLGLA 210

Query: 221 FQLADDLLD 229
           FQ+ DD+LD
Sbjct: 211 FQIVDDILD 219


>gi|255324689|ref|ZP_05365803.1| bifunctional short chain isoprenyl diphosphate synthase
           [Corynebacterium tuberculostearicum SK141]
 gi|255298164|gb|EET77467.1| bifunctional short chain isoprenyl diphosphate synthase
           [Corynebacterium tuberculostearicum SK141]
          Length = 334

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 32/200 (16%)

Query: 49  GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+ R   + L +E         +  ++    +E +H  +L HDD+  MD    RRG  
Sbjct: 55  GGKRFRPMMALLASEYGPRPGCKEV--VKAATVVEMVHVATLYHDDV--MDEADRRRGVE 110

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIG-----LQGM 159
           + + +++   AI+AG+ LL +A                S+LM  L TH +G      + +
Sbjct: 111 SANSRWNNSVAILAGDALLAHA----------------SRLMSELDTHTVGHFADTFEEL 154

Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQM +     E         + + KT  L+  A   GA  + AS      L   G  +
Sbjct: 155 VTGQMRETIGAGEANAVEHYTAVIREKTAVLIASAGYLGAYHSGASAEHAAALHRIGGAI 214

Query: 218 GIIFQLADDLLDCEEDLPKK 237
           G+IFQ+ DD++D   D PK+
Sbjct: 215 GMIFQIVDDVIDIFSD-PKE 233


>gi|213420464|ref|ZP_03353530.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 244

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 8/148 (5%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           +L+HDD+  +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++  
Sbjct: 1   TLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVL 53

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            ++S   N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  
Sbjct: 54  EVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPE 112

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
           +++ L+ +G  LG  FQL DDLLD   D
Sbjct: 113 QEKGLQDYGRYLGTAFQLIDDLLDYSAD 140


>gi|50285865|ref|XP_445361.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524665|emb|CAG58267.1| unnamed protein product [Candida glabrata]
          Length = 471

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 40/194 (20%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130
           R+   +E IH  SL+HDD+  +D    RRG+P+ ++ +    A++AG+ LL   T A   
Sbjct: 175 RLAEIVEMIHTASLLHDDV--IDYSDTRRGRPSGNVAFSNKMAVLAGDFLLGRATVAISR 232

Query: 131 ISSPK-TQLKDN-----IRSQLMLSLTHNIGLQGMLGGQMLDI----------------- 167
           + +P+  +L  N     +  + M      +  Q ++G +   I                 
Sbjct: 233 LKNPEVVELMSNSIANLVEGEFMQLKNMAVEDQPLVGSKNDKILPPPSKKLELKEHDYRV 292

Query: 168 ----------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                      +E I+    + + K  +KT AL+  +  + AI++ A     E    FG 
Sbjct: 293 ATPEATGSFSHEEVINIAFEYYLHKTYLKTAALISKSSRAAAILSGARDPVIEECYSFGR 352

Query: 216 NLGIIFQLADDLLD 229
           N+GI FQL DDLLD
Sbjct: 353 NIGICFQLVDDLLD 366


>gi|311739255|ref|ZP_07713092.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311305681|gb|EFQ81747.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 334

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 32/200 (16%)

Query: 49  GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+ R   + L +E         +  ++    +E +H  +L HDD+  MD    RRG  
Sbjct: 55  GGKRFRPMMALLASEYGPRPGCEEV--VKAATVVEMVHVATLYHDDV--MDEADRRRGVE 110

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIG-----LQGM 159
           + + +++   AI+AG+ LL +A                S+LM  L TH +G      + +
Sbjct: 111 SANSRWNNSVAILAGDALLAHA----------------SRLMSELDTHTVGHFADTFEEL 154

Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQM +     E         + + KT  L+  A   GA  + AS      L   G  +
Sbjct: 155 VTGQMRETIGAGEANAVEHYTAVIREKTAVLIASAGYLGAYHSGASAEHAAALHRIGGAI 214

Query: 218 GIIFQLADDLLDCEEDLPKK 237
           G+IFQ+ DD++D   D PK+
Sbjct: 215 GMIFQIVDDVIDIFSD-PKE 233


>gi|90994460|ref|YP_536950.1| prenyl transferase [Porphyra yezoensis]
 gi|122194707|sp|Q1XDL8|PREA_PORYE RecName: Full=Prenyl transferase
 gi|90819024|dbj|BAE92393.1| prenyl transferase [Porphyra yezoensis]
          Length = 323

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R    FLV +  S     +    R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRVRPALVFLVAKATSEKQDINTGQKRLAEITEIIHTASLVHDDI--IDECTTRRGVK 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH  ++   A++AG+ L   +   +++ +        S+++         QG++     
Sbjct: 102 TVHNLFNTKIAVLAGDFLFAQSSWYLANIENLAVVKAISKVITDFAEGEIRQGLVHFDPS 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D +I+++        KT +L+  +C   A++  ++      L  +G+++G+ FQ+ D
Sbjct: 162 ISIDAYIEKSF------YKTASLIAASCRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DVLD 219


>gi|229891676|sp|P0C9E2|TPRT_ASFK5 RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
          Length = 318

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 40/244 (16%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H     +       A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISSPKTQLKDN---------IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I      +K+N         + + L   ++H++   G   GQ++D  ++ 
Sbjct: 160 LALTMQGFQNICRQVDWIKENCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217

Query: 172 IDETQVFMI--QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I   ++  I    + TG +     + GAI   A         CFG      FQLADD+ D
Sbjct: 218 IPFFKIAFIMGWVLGTGTIE----DIGAIERAA--------HCFGN----AFQLADDIKD 261

Query: 230 CEED 233
            + D
Sbjct: 262 HDTD 265


>gi|118595231|ref|ZP_01552578.1| trans-hexaprenyltranstransferase [Methylophilales bacterium
           HTCC2181]
 gi|118441009|gb|EAV47636.1| trans-hexaprenyltranstransferase [Methylophilales bacterium
           HTCC2181]
          Length = 321

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 14/184 (7%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     L  +     N +H     + A IE IH  +L+HDD+  +D    RR K 
Sbjct: 42  GGKRMRPSIHLLFAKLTGEINTSHHA---MAAIIEFIHTATLLHDDV--VDQSTQRRSKK 96

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T +  +   ++++ G+ + + +F+++    T++ +    +++   T+ I    +L  Q+L
Sbjct: 97  TANALFGNSSSVLVGDFIYSRSFQMM----TKINNMEVMEILADATNAISEGEIL--QLL 150

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + ++  + E   F +   KT  L         ++    Q +++ L   G   GI+FQL D
Sbjct: 151 NTKNPDLSENDYFQVIGFKTAKLFESCGSLAGVLNEVDQEKQKDLAKLGNIFGIMFQLTD 210

Query: 226 DLLD 229
           D+LD
Sbjct: 211 DILD 214


>gi|9628182|ref|NP_042768.1| prenyltransferase [African swine fever virus]
 gi|82051504|sp|Q65164|TPRT_ASFB7 RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
 gi|780444|gb|AAA65304.1| prenyltransferase [African swine fever virus]
 gi|162849284|emb|CAN10174.1| Prenyltransferase [African swine fever virus Benin 97/1]
 gi|162849457|emb|CAN10424.1| Prenyltransferase [African swine fever virus OURT 88/3]
 gi|291289519|emb|CBH29176.1| BA71V-B318L [African swine fever virus E75]
 gi|1097465|prf||2113434CC prenyltransferase
          Length = 318

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  SK  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSKEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H     +       A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  ++ 
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I     F I  +    L     E   ++  A+        CFG      FQLADD+ D +
Sbjct: 218 I---PFFKIAFIMGWVLGTGTIEDIGMIERAAH-------CFGH----AFQLADDIKDHD 263

Query: 232 ED 233
            D
Sbjct: 264 TD 265


>gi|25028623|ref|NP_738677.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314]
 gi|259507682|ref|ZP_05750582.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
 gi|23493909|dbj|BAC18877.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314]
 gi|259164729|gb|EEW49283.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
          Length = 366

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 35/217 (16%)

Query: 40  LSAIR-YALLGGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           LS +R + L GGK+IR       F+  +     + +    L   A++E I   +LIHDD+
Sbjct: 44  LSYLRDFVLNGGKRIRPLYVWAGFVAAQGPGRSSEDINAVLDAAASLEFIQACALIHDDI 103

Query: 93  PSMDNGYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             +D+   RRG PTVH                  + E  AI+AG+  L +A +++     
Sbjct: 104 --IDSSDTRRGAPTVHRAVESMHGAVGLEGDAAHFGESVAILAGDMALVWAEDMLQDSGL 161

Query: 137 QLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                    L  +     G++  ++GGQ+LDI  E      V +   +       +  E 
Sbjct: 162 SAA-----ALARARDAWRGMRTEVIGGQLLDIYLEAQASESVELANSVNRFKTAAYTIER 216

Query: 196 ----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
               GA +A  +    + LR +G ++GI FQL DDLL
Sbjct: 217 PLHLGASLAGGAPELIDALRNYGRDIGIAFQLRDDLL 253


>gi|257784150|ref|YP_003179367.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469]
 gi|257472657|gb|ACV50776.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469]
          Length = 347

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 35/239 (14%)

Query: 4   GLP----SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           GLP    S    +S+R    L+  L Q  +H              ++  GGK++R  L  
Sbjct: 21  GLPAASTSPANASSERTHADLNTYLYQPLAH--------------FSAGGGKRVRPVLCC 66

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   AL VG AIE     +LIHDD+   D   +RRG+  ++       AI  
Sbjct: 67  LGAEAVGGSAEAALPVGCAIEDFQSAALIHDDIA--DKSELRRGEKCLYKTLGTGLAINV 124

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQL---MLSLTHNIGLQGMLGGQMLDI---QDEFID 173
           G+  L      ++     L D I+ ++   +LS+  +      L GQ LD+   Q+E  D
Sbjct: 125 GDSALVNVVRRVTVAD-HLSDQIKVRVIDALLSMEEHT-----LEGQALDLGWAQNERWD 178

Query: 174 ETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            T    +FM           +    GA++  A Q   + L+ FG  +G+ FQL DDLL+
Sbjct: 179 VTSDQYLFMALSKTAYYSAAYPLVLGALIGGADQKTLDALKDFGLKVGLAFQLQDDLLN 237


>gi|240168232|ref|ZP_04746891.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           kansasii ATCC 12478]
          Length = 352

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 37/212 (17%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +AL GGK++R        + +  + +T        L++ +A+E +H ++LIHDD+  +D 
Sbjct: 37  FALRGGKRLRPVF-----AYWGWHAVTTEEPGPEILQLFSALELLHAWALIHDDV--IDA 89

Query: 98  GYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISS-PKTQLKD 140
              RRG+PT H+                Q+    AI+ G+    +A +I+S   +T L  
Sbjct: 90  SSTRRGRPTAHVHFAALHRERNWLGPAHQFGISAAILLGDVAQAWADDIVSEVGQTSLPP 149

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           +  ++ +  +   I  + +LGGQ LDI  E    + +     + T    C+       + 
Sbjct: 150 DA-ARRVRRVWSGIRTE-VLGGQYLDIVAEASAASSIASAMTVATFKTACYTVSRPLQLG 207

Query: 201 HASQNEKERLRC----FGENLGIIFQLADDLL 228
            A+  ++  +      FG +LG+ FQL DD+L
Sbjct: 208 VAAAADRPDVAAAFHQFGTDLGVAFQLRDDVL 239


>gi|229490670|ref|ZP_04384508.1| bifunctional short chain isoprenyl diphosphate synthase
           [Rhodococcus erythropolis SK121]
 gi|229322490|gb|EEN88273.1| bifunctional short chain isoprenyl diphosphate synthase
           [Rhodococcus erythropolis SK121]
          Length = 359

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 16/187 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +A+  A  GGK+ R       A L  V N  + +      E +H  +L HDD+  MD   
Sbjct: 71  AALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITAATVTELVHLATLYHDDV--MDEAS 128

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG P+ + ++    AI+AG+ L  +A  ++S   T   + +R   +++ T       +
Sbjct: 129 MRRGAPSANARWGNSVAILAGDYLFAHASRLVS---TLGPEAVR---IIAET----FAEL 178

Query: 160 LGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + GQM   + ++ E         +   KTG+L+  +   G   + A     ERL   G+ 
Sbjct: 179 VTGQMRETIGVKKEQDPVEHYLKVVWEKTGSLIAASGRFGGTFSGADAAHIERLERLGDA 238

Query: 217 LGIIFQL 223
           +G  FQ+
Sbjct: 239 VGTAFQI 245


>gi|320103110|ref|YP_004178701.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644]
 gi|319750392|gb|ADV62152.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644]
          Length = 364

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 34/251 (13%)

Query: 11  ENSKRIDTILDDLLLQTASHM--QTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64
           E+  RID  L  +  QT        Q    +  A+++ L GGK+IR  L      +    
Sbjct: 21  EDRARIDARLTRVFDQTRRRYACNPQVAPLVEEALKFTLEGGKRIRPRLCLAAYRILTQR 80

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE---VTA----- 116
           F         V   +E +H + L+HDDL  MD    RR +PT+H +Y E   V+A     
Sbjct: 81  FEPPPAPVWNVAVVLEALHAFMLVHDDL--MDQSLTRRDRPTLHERYREGLNVSARTAGD 138

Query: 117 --IIAGNGLLTYAFEIISSPK---TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-- 169
             I+AG+ +   A  ++       T+L   +R  ++  +    GL     GQ LD+    
Sbjct: 139 LGIVAGDWMFALAIRMLGRAGLQGTRLARVVR--IIAEMLIETGL-----GQSLDLLHDG 191

Query: 170 ---EFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              E I E  +  + + KT    +      GA +A+A    +  L  FG+ LG  +Q+ +
Sbjct: 192 RSLESITEEDITTLYRWKTARYTVSGPLVLGAALANAPAATRRCLNRFGDLLGFGYQICN 251

Query: 226 DLLDCEEDLPK 236
           DL   E+DL +
Sbjct: 252 DLESLEDDLER 262


>gi|311741515|ref|ZP_07715339.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311303685|gb|EFQ79764.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 359

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 37/211 (17%)

Query: 45  YALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + L GGK++R          A     +    LR  A++E I   +LIHDD+  +D    R
Sbjct: 46  FVLDGGKRVRPTYAWAGYLAAGRGEEDPAAMLRAAASLEFIQACALIHDDI--IDASNTR 103

Query: 102 RGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           RG PTVH   +++                 AI+ G+  L YA ++        +D+  S 
Sbjct: 104 RGNPTVHRGVEKLHRESEYLGDPEFFGTSVAILVGDLALVYAEDM-------FQDSGLSA 156

Query: 146 LMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GA 197
             L    +   +GM    +GGQ+LDI  E      V +   +       +  E     GA
Sbjct: 157 AALHRARSP-WRGMRTEVIGGQLLDISLEAAGSESVELANSVNRYKTAAYTIERPLHLGA 215

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +A AS+      R +G ++GI +QL DD L
Sbjct: 216 AIAGASEELIAAFRGYGHDIGIAYQLRDDQL 246


>gi|226305198|ref|YP_002765156.1| polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4]
 gi|226184313|dbj|BAH32417.1| putative polyprenyl diphosphate synthase [Rhodococcus erythropolis
           PR4]
          Length = 349

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 16/187 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +A+  A  GGK+ R       A L  V N  + +      E +H  +L HDD+  MD   
Sbjct: 61  AALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITAATVTELVHLATLYHDDV--MDEAS 118

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG P+ + ++    AI+AG+ L  +A  ++S   T   + +R   +++ T       +
Sbjct: 119 MRRGAPSANARWGNSVAILAGDYLFAHASRLVS---TLGPEAVR---IIAET----FAEL 168

Query: 160 LGGQM---LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + GQM   + ++ E         +   KTG+L+  +   G   + A     ERL   G+ 
Sbjct: 169 VTGQMRETIGVKKEQDPVEHYLKVVWEKTGSLIAASGRFGGTFSGADAAHIERLERLGDA 228

Query: 217 LGIIFQL 223
           +G  FQ+
Sbjct: 229 VGTAFQI 235


>gi|225158893|ref|ZP_03725207.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
 gi|224802511|gb|EEG20769.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
          Length = 429

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R  A +E +H  +L+HDD+  MD   +RR +PT   +Y    A++ G+ LL +A  + S
Sbjct: 172 VRAAAVVELVHLATLVHDDI--MDEADVRRNRPTAARKYGSEAAVLLGDALLAHAVYLAS 229

Query: 133 S-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
             P T++   + SQ    +     +Q +  G   DI     D      +  +KT  L   
Sbjct: 230 QFPTTEVCAAV-SQSTRKVCAGEIVQTLRRGTT-DISRADYDR-----VIDLKTAELFRV 282

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +C  GA ++    +       FG +LGI +Q+ DDL D
Sbjct: 283 SCHLGARLS-GHPDFAPAASTFGRHLGIAYQIYDDLAD 319


>gi|240169241|ref|ZP_04747900.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium kansasii
           ATCC 12478]
          Length = 335

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A +  +      +  GA +E IH  +L HDD+  MD   +RRG P+ 
Sbjct: 55  GGKRFRPLFTVLSAQVGPDPEAEEVIIAGAVVELIHLATLYHDDV--MDEAEVRRGAPSA 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+ LL  A  ++S         +       +T          GQM + 
Sbjct: 113 NARWGNNVAILAGDYLLATASRLVSRLGPAAVRIVADTFAALVT----------GQMRET 162

Query: 168 Q--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   E  D  + ++ +   KTG+L+  A   GA+ + A  ++ ERL   G  +G  FQ+A
Sbjct: 163 RGAPEGADLIEQYLTVVHEKTGSLIGAAGRFGAMFSGADGDQVERLSRLGGIVGTAFQIA 222

Query: 225 DD 226
           DD
Sbjct: 223 DD 224


>gi|166362742|ref|YP_001655015.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843]
 gi|166085115|dbj|BAF99822.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843]
          Length = 323

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS--FLVTECASLFNVNHLTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R    L+   A++ + +     R  A I E IH  SL+HDD+  +D   +RR  P
Sbjct: 44  GGKRVRPAIVLLVSRATMLDRDITPRHRRLAEITEMIHTASLVHDDV--VDEAELRRRVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV+  +D   A++AG+ L   +   +++      DN+    +LS       +G +  Q +
Sbjct: 102 TVNSLFDNRVAVLAGDFLFAQSSWYLAN-----LDNLEVVKLLSEVIRDFAEGEIQ-QGI 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  I           KT +L+  + ++  +++  S      L  +G +LG+ FQ+ D
Sbjct: 156 NRFDTSISLAAYLEKSYYKTASLIANSAKAAGVLSEQSAEVNHHLYNYGRDLGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|88808408|ref|ZP_01123918.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805]
 gi|88787396|gb|EAR18553.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805]
          Length = 323

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R     LV+   S          R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLVSRGLSPEGELSPRHRRLAEITEMIHTASLVHDDV--VDEAGTRRGVE 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFRYDTG 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + +++++        KT +L+  +  +  +++  ++ + E L  +G  LG+ FQ+ D
Sbjct: 162 QTFETYLEKSYC------KTASLIANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|296415815|ref|XP_002837581.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633454|emb|CAZ81772.1| unnamed protein product [Tuber melanosporum]
          Length = 343

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+   +E IH  +L+HDD+  +D    RRG P+ +       +I+AG+ +L  A   
Sbjct: 74  TQRRLAEIVELIHTATLLHDDV--LDQAETRRGNPSANSLSGNKLSILAGDYMLGRASVY 131

Query: 131 ISSPKTQLKDNIRSQLMLSLTHN--IGLQGMLGGQMLDIQDEFIDETQV-----FMIQK- 182
           ++  +      + ++++  L     + LQ    G   D   +   E  +     + ++K 
Sbjct: 132 LARLRNPEVIELLAEVIAELVKGELLQLQNTATGTTADFTSKSSREAHLRDSLEYYLEKT 191

Query: 183 -MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +K+ +L+  +C + A++  A+++   +   +G +LG+ FQL DD+LD
Sbjct: 192 YLKSASLISKSCRATAVLGGATEDVAAKAYSYGRHLGLAFQLVDDVLD 239


>gi|154249013|ref|YP_001409838.1| polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154152949|gb|ABS60181.1| Polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 341

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 30/206 (14%)

Query: 44  RYALLGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            + L  GK++R  L+    + +   ++  A+   AAIE +H + L+HDD+  +DN  +RR
Sbjct: 38  EFTLRPGKRVRPLLLLLSYNGYKGKNMDDAITFAAAIEIMHSFLLVHDDI--IDNADLRR 95

Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH- 152
           GKPT+H  Y++           AI+ G+ +  Y F I+S  K    ++   +++ + +  
Sbjct: 96  GKPTLHKTYEKSYNSSKLGTDLAIVVGDIVAFYIFGILSELKVS--ESTLKKIVKNFSKC 153

Query: 153 --NIGLQGMLGGQMLD------IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHAS 203
             N G      GQ+LD      I D+ ++E     I ++KT      +    G  ++  +
Sbjct: 154 YVNTGF-----GQLLDILYAGRIDDKIVNEDIPEKISELKTAYYTFVYPMLFGYYLSENN 208

Query: 204 QNEKERLRCF-GENLGIIFQLADDLL 228
             ++E      G+N GI FQ  DD++
Sbjct: 209 IEKEEEKILIVGKNAGIAFQYRDDII 234


>gi|183983198|ref|YP_001851489.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           marinum M]
 gi|183176524|gb|ACC41634.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           marinum M]
          Length = 340

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 47/178 (26%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTY 126
           H ++LIHDD+  +D    RRG+PT H+                Q+    AI+ G+    +
Sbjct: 65  HAWALIHDDV--IDASSTRRGRPTAHMHFAALHRDRNWLGPAQQFGISAAILIGDVAQAW 122

Query: 127 AFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
           A +IIS       SP  Q +      +IR+++             LGGQ LDI  E    
Sbjct: 123 ADDIISRVSQSSLSPDAQRRVQRVWSDIRTEV-------------LGGQYLDIVAEASAA 169

Query: 175 TQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             +     + T    C+        GA  A    + +E    FG +LG+ FQL DD+L
Sbjct: 170 DSITSAMTVATFKTACYTVSRPLQLGAAAAADRPDVQEAFHQFGTDLGVAFQLRDDVL 227


>gi|306835165|ref|ZP_07468202.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC
           49726]
 gi|304568954|gb|EFM44482.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC
           49726]
          Length = 334

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)

Query: 49  GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+ R   + L +E  +      +  ++    +E +H  +L HDD+  MD    RRG  
Sbjct: 55  GGKRFRPMMALLASEYGAKPGCEEV--IKSATVVEMVHVATLYHDDV--MDEADRRRGVE 110

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIG-----LQGM 159
           + + +++   AI+AG+ LL +A                S+LM  L TH +G      + +
Sbjct: 111 SANSRWNNSVAILAGDALLAHA----------------SRLMSQLDTHTVGHFADTFEEL 154

Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQM +     E         + + KT  L+  A   GA  + AS +    L   G  +
Sbjct: 155 VTGQMRETIGAGEANPVDHYMAVIQEKTAVLIASAGYLGAYHSGASADHAAALYRIGGAI 214

Query: 218 GIIFQLADDLLDCEEDLPK 236
           G+IFQ+ DD++D   D PK
Sbjct: 215 GMIFQIVDDVIDIFSD-PK 232


>gi|261884869|ref|ZP_06008908.1| polyprenyl synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 243

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 40/228 (17%)

Query: 14  KRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           +RID IL    D L    AS M +Q +             GKK+RS L+ + A       
Sbjct: 2   ERIDDILKEFVDSLNYPLASEMFSQVS------------SGKKLRSKLILKIAGASE--- 46

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             + ++ + +E IH  S++HDD+  +D+  IRRGKP+++  +    +I+ G+ L +  F 
Sbjct: 47  -ASFKLSSVVEIIHLASVLHDDV--IDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGFN 103

Query: 130 IISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQ--DEF-IDETQVFMIQKMKT 185
            I     ++ D I   +  LS+           G+++D++    F  D+ +   +   KT
Sbjct: 104 EIVKFDMKIADIISDAVCKLSI-----------GELMDVELGSSFNADKEKYLKMIYFKT 152

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L+  A +S    A  +  ++++   +G+NLG+ FQ+ DD+LD   D
Sbjct: 153 AVLIEAAAKS---AAILAGFDEQKYGDYGKNLGLAFQIVDDILDITSD 197


>gi|163841244|ref|YP_001625649.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209]
 gi|162954720|gb|ABY24235.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209]
          Length = 362

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 90/218 (41%), Gaps = 36/218 (16%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSM 95
           L+  I   + GGK++R+ L          N  T+  +   GAA+E     +LIHDD+  +
Sbjct: 42  LIDTISGLVTGGKRMRALLCYWGWRGAGGNPETSSPITTAGAALELFQAAALIHDDI--I 99

Query: 96  DNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLK 139
           D   IRRG P+VH Q+ ++                 AI+AG+  L+++ E+ SS      
Sbjct: 100 DRSDIRRGAPSVHRQFSQLHQRQRWALDPERFGHAAAILAGDLCLSFSEEVFSSINVPAP 159

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCFACE 194
              RS        N     ++ GQ LDI +E        E  V   Q +       ++ E
Sbjct: 160 QKARS------VFNTMRAEVMAGQYLDILEEVAGPSRGPENAVERAQSIIRYKSAKYSSE 213

Query: 195 S----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                G  +A A  N       F   LG  FQL DD+L
Sbjct: 214 HPLVLGGALAGADANLLSGYSAFALPLGEAFQLRDDML 251


>gi|257053117|ref|YP_003130950.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691880|gb|ACV12217.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
          Length = 346

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 30/213 (14%)

Query: 38  RLLSAIRYAL-LGGKKIR-SFLVTECASLFNV--------------NHLTALRVGAAIEC 81
           +L  A RY L  GGK++R + L+    S+ +V                +  +    +IE 
Sbjct: 36  KLYEASRYLLDAGGKRLRPTILLLVAESIADVLPRSEPYREFPAAEGPIDMMSAAVSIEI 95

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           I  ++LIH     MD+  +RRG P VH ++D  TAI+AG+ L   AFE +    +    +
Sbjct: 96  IQSFTLIH--DDIMDDDDMRRGVPAVHREFDLSTAILAGDTLYAKAFENMLETGSTGDRS 153

Query: 142 IR--SQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESG 196
           +R  S+L  + T       +  GQ +DI+   DE +       + ++KT  L   A    
Sbjct: 154 VRALSELATTCTQ------ICEGQSMDIEFETDETVTTEDYLEMVELKTAVLYAAAASIP 207

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            I+     +  + L  +G N+G  FQ+ DDLLD
Sbjct: 208 PIL-MGEDDYVDPLYQYGLNIGRGFQIQDDLLD 239


>gi|89075549|ref|ZP_01161954.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34]
 gi|89048689|gb|EAR54261.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34]
          Length = 323

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLAVLAARALGYDGDKHTTAAAFIEFIHTATLLHDDV--VDESNMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + +  AI+A A    +  L+ +G  LG  FQL DD+L
Sbjct: 155 DPNTTEDSYMQVIYSKTARLFEASTQIAAIIAQAPAEIELALQEYGRYLGTAFQLIDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|290790227|pdb|3LK5|A Chain A, Crystal Structure Of Putative Geranylgeranyl Pyrophosphate
           Synthase From Corynebacterium Glutamicum
 gi|325054159|pdb|3QQV|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Corynebacterium Glutamicum Complexed With Isoprenyl
           Diphosphate And Magnesium
          Length = 380

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 40/214 (18%)

Query: 45  YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR       FL  +     +    + L   A++E I   +LIHDD+  +D+ 
Sbjct: 57  FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 114

Query: 99  YIRRGKPTVH--IQYDE--------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH  ++ D                 +I+AG+  L +A       +  L+D+ 
Sbjct: 115 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDXALVWA-------EDXLQDSG 167

Query: 143 RSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQVFM---IQKMKTGAL-MCFACE 194
            S   L+ T +   +G    ++GGQ+LDI  E      V +   + + KT A  +     
Sbjct: 168 LSAEALARTRD-AWRGXRTEVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLH 226

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +A  S    + L  +G ++GI FQL DDLL
Sbjct: 227 LGASIAGGSPQLIDALLHYGHDIGIAFQLRDDLL 260


>gi|227502598|ref|ZP_03932647.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens
           ATCC 49725]
 gi|227076638|gb|EEI14601.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens
           ATCC 49725]
          Length = 334

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)

Query: 49  GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+ R   + L +E  +      +  ++    +E +H  +L HDD+  MD    RRG  
Sbjct: 55  GGKRFRPMMALLASEYGAKPGCEKV--IKSATVVEMVHVATLYHDDV--MDEADRRRGVE 110

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIG-----LQGM 159
           + + +++   AI+AG+ LL +A                S+LM  L TH +G      + +
Sbjct: 111 SANSRWNNSVAILAGDALLAHA----------------SRLMSQLDTHTVGHFADTFEEL 154

Query: 160 LGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQM +     E         + + KT  L+  A   GA  + AS +    L   G  +
Sbjct: 155 VTGQMRETIGAGEANPVDHYMAVIQEKTAVLIASAGYLGAYHSGASADHAAALYRIGGAI 214

Query: 218 GIIFQLADDLLDCEEDLPK 236
           G+IFQ+ DD++D   D PK
Sbjct: 215 GMIFQIVDDVIDIFSD-PK 232


>gi|162451281|ref|YP_001613648.1| trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56']
 gi|161161863|emb|CAN93168.1| Trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56']
          Length = 336

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           +T +H   +H   LL       L GK++R   V   + + +  +  A     A+E +H  
Sbjct: 40  ETPAHRSARH---LLG------LNGKRLRPICVALASHIGSGFNDAARTFAVAVELVHNA 90

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           +L+HDD+  +D G  RRG     + Y    +I  G+ LL  A   I +       ++  +
Sbjct: 91  TLLHDDV--VDLGDRRRGADAARVIYGNAASIFGGDYLLLDALSKIQAVGMT---DVLER 145

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++L +   +  + +   Q+          ++ F I   KT +L  +A  +GA     ++ 
Sbjct: 146 VLLVIKEMVVAEAL---QLASRGRVRTSTSEYFQIVDGKTASLFRWAMFAGARAGGVNEP 202

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
             + L  FG +LG+ FQL DD+LD   D
Sbjct: 203 LCKALESFGTSLGVAFQLVDDVLDFAGD 230


>gi|189346622|ref|YP_001943151.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
 gi|189340769|gb|ACD90172.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
          Length = 324

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 33/206 (16%)

Query: 44  RYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L   GK+IR  LV   A +         R    +E +H  +LIHDD+  +D   +RR
Sbjct: 37  RYVLRQQGKQIRPALVLLSAKICGGVTEVTYRAAIMVELLHSATLIHDDV--VDGAEMRR 94

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH---------N 153
           G  +++  +    +++ G+ LL+                    L+ SL H         +
Sbjct: 95  GLASINALWKNKISVLIGDYLLSKG------------------LLYSLDHKDYASLHTVS 136

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             ++ M  G++L IQ      I E     +   KT +L+  +C  GA  A         +
Sbjct: 137 DAVRRMSEGEILQIQKTRSLDISEEDYISVISDKTASLIASSCAMGAASATDDDTMIAGM 196

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
           + +GE LG+ FQ+ DDLLD   D  K
Sbjct: 197 KRYGEYLGLAFQIRDDLLDYTGDSKK 222


>gi|118616467|ref|YP_904799.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans
           Agy99]
 gi|183980932|ref|YP_001849223.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M]
 gi|118568577|gb|ABL03328.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans
           Agy99]
 gi|183174258|gb|ACC39368.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M]
          Length = 335

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 16/184 (8%)

Query: 47  LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           L GGK+ R       A +  N      +  GA IE IH  +L HDD+  MD   +RRG P
Sbjct: 53  LAGGKRFRPLFTVLSAQVGPNPGADEVVIAGAVIEMIHLATLYHDDV--MDEAQVRRGAP 110

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           + + ++    AI+AG+ LL  A  ++S       D +R      +  +   Q ++ GQM 
Sbjct: 111 SANARWGNNVAILAGDYLLATASRLVSRLG---PDAVR------IVADTFAQ-LVTGQMR 160

Query: 166 DIQ--DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           + +   E +D  + ++ +   KTG L+  A   G + + A   + ERL   G  +G  FQ
Sbjct: 161 ETRGAPEGVDMIEQYLKVVHEKTGCLIGAAGRFGGMFSGADGEQVERLNRLGGIVGTAFQ 220

Query: 223 LADD 226
           +ADD
Sbjct: 221 IADD 224


>gi|325000136|ref|ZP_08121248.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1]
          Length = 382

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 101/260 (38%), Gaps = 38/260 (14%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI---------------RYALLG 49
           +PS   E +    T LDD L Q    +   + DR  + +                + L G
Sbjct: 10  VPSGRAEVTPAGATPLDDALPQHVERVLAGYLDRRRTDVLGVDPAVAQAADALAGFVLGG 69

Query: 50  GKKIRSFLVTE----CASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GK++R                 +H  A L   A++E I   +L+HDDL  MD    RRG+
Sbjct: 70  GKRLRPTFAWWGWRGAGGDPGSDHAQAVLTAVASLELIQACALVHDDL--MDASSTRRGR 127

Query: 105 PTVHIQYDEVTAIIAGNGL---LTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQG- 158
           PTVH+++    A    +G       A  I+     Q+   D   S  +    H    +  
Sbjct: 128 PTVHVEFARTHAANDWSGPPARFGAAVAILVGDLAQVWADDMFHSAALPDGAHGRAAEPW 187

Query: 159 ------MLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKE 208
                 +L GQ LD+  +      E+    I + KT A         GA +A A      
Sbjct: 188 RAMRTEVLAGQYLDVLAQASGDTAESTALQIDRFKTAAYTVERPLHLGAAIAGAEPQVVN 247

Query: 209 RLRCFGENLGIIFQLADDLL 228
             R +G ++G+ FQL DDLL
Sbjct: 248 AYRRYGADIGVAFQLRDDLL 267


>gi|213409778|ref|XP_002175659.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212003706|gb|EEB09366.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 381

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 39/216 (18%)

Query: 45  YALLGGKKIRS---FLVTECASLFN-VNHLTA----------------------LRVGAA 78
           Y L  GK++R     LV+   SL N +N   A                      LR+   
Sbjct: 69  YTLAQGKQLRPSLVLLVSRAVSLLNGINRSVASERYILDCNPALLLDGDVLPSQLRLAQI 128

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL+HDD+  +D    RRG+ + +I +    A+ AG+ +L  A    S+   +L
Sbjct: 129 TEMIHVASLLHDDV--IDLATHRRGQVSGNIAFGNQQAVFAGDFILARA----STAMARL 182

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQK--MKTGALMCFAC 193
           ++   ++L+ ++  ++     L  Q+ ++ ++  D  Q    + ++K  +KT +L+  +C
Sbjct: 183 RNTRVTELLATVIADLIRGEFL--QLRNVDEKGGDALQASFDYYLEKSYLKTASLISKSC 240

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + A++  A  +  + +  FG  LGI FQL DD LD
Sbjct: 241 MAAAVLGKAVPSIVQAIGEFGRCLGIAFQLVDDALD 276


>gi|54027096|ref|YP_121338.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM
           10152]
 gi|54018604|dbj|BAD59974.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM
           10152]
          Length = 345

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 16/187 (8%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGY 99
           +A+  A  GGK+ R         L       AL   G  +E +H  +L HDD+  MD   
Sbjct: 57  AALHLAKAGGKRFRPLFTILTGQLGPRPTDPALITAGTVVELVHLATLYHDDV--MDEAT 114

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG P+V+ ++    AI+AG+ L  +A  + S   T   D +R   +++ T       +
Sbjct: 115 MRRGAPSVNSRWGNNIAILAGDYLFAHASRLTS---TLGPDAVR---IIAET----FAEL 164

Query: 160 LGGQMLDIQD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + GQM +     E  D  + ++ +   KTG+L+  A   G   + A     ERL   G+ 
Sbjct: 165 VTGQMRETMGARESQDPVEHYLRVVWEKTGSLIAAAGRFGGTFSGADTAHIERLARLGDA 224

Query: 217 LGIIFQL 223
           +G  FQ+
Sbjct: 225 VGTAFQI 231


>gi|257076714|ref|ZP_05571075.1| geranylgeranyl pyrophosphate synthase [Ferroplasma acidarmanus
           fer1]
          Length = 352

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 36/249 (14%)

Query: 7   SKLQENSKR-IDTILDDLLLQTASHMQ--------TQHNDRLLSAIRYALLGGKKIRSFL 57
           S +++N K+ +D + D +  Q  ++          T+  D ++    + L GGK++R  L
Sbjct: 2   SNIEDNYKKTLDGLKDKINAQLEAYFNFKLNECDDTRIKDIIIKLRDFTLNGGKRLRPIL 61

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----- 112
           +    ++F+      ++   +IE    + LIHDD+  MD   +RRGKP+ H   +     
Sbjct: 62  MIMGYNMFSGQDERIIKASISIELAQSFLLIHDDI--MDQSDMRRGKPSFHKAVEGSLDG 119

Query: 113 -------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                  E  AI AG+ + T++ E +     +L++ + +    S      ++    GQ+L
Sbjct: 120 NDATRIAENLAISAGDLIDTFSHEALLRSGFELENLLDADFEFSRI----IEDTGKGQIL 175

Query: 166 DIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIM-AHASQNEK--ERLRCFGENLGI 219
           DI    +    E ++  +  +KT     +  +   +M A+ S N+K  + ++ FG+  GI
Sbjct: 176 DIYSSIENLYSEERLTKLHFLKTAR---YTVQGPLLMGAYLSGNKKYIQEIKDFGKYAGI 232

Query: 220 IFQLADDLL 228
            FQL DD+L
Sbjct: 233 AFQLYDDML 241


>gi|332019800|gb|EGI60261.1| Decaprenyl-diphosphate synthase subunit 1 [Acromyrmex echinatior]
          Length = 337

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 18/188 (9%)

Query: 50  GKKIRSFLVTECASLFNVNH-----LTALRVGAAI-ECIHCYSLIHDDLPSMDNGYIRRG 103
           GK +R       A   N +      L + R  A I E IH  SL+HDD+  +D    RRG
Sbjct: 56  GKAVRPMFTILMARAINYHKGRNDLLYSQRQIAMISEMIHNASLLHDDV--IDQSDFRRG 113

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           KP+V++ + +    +AGN +L+ A  ++S   +       SQL+  L     +Q  LG +
Sbjct: 114 KPSVNVLWSQKKVAMAGNYILSIACMMLSEIHSDDVTISISQLISDLVQGEFMQ--LGSK 171

Query: 164 MLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                 E  +E     + K   KT +L+    +  AI+++  +   E    +G N+G+ F
Sbjct: 172 ------ETENERFAHYLTKTYRKTASLIANCMKGVAILSNVDERTIEMAFQYGRNVGLAF 225

Query: 222 QLADDLLD 229
           QL DDLLD
Sbjct: 226 QLVDDLLD 233


>gi|76802911|ref|YP_331006.1| multifunctional short/ long-chain (E)-prenyl diphosphate synthase
           [Natronomonas pharaonis DSM 2160]
 gi|76558776|emb|CAI50369.1| probable multifunctional short/ long-chain (E)-prenyl diphosphate
           synthase [Natronomonas pharaonis DSM 2160]
          Length = 353

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R+ L        + +    L   A  E +H  ++I DD+   D    RRG P +H
Sbjct: 60  GGKRWRAVLFLLLVEALDDDPDAYLEYAAIPEILHNGTIIVDDVE--DGATHRRGDPALH 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             +    A+ AGN +     +II+     L  + R      L + +    +  GQ +DI 
Sbjct: 118 HTHGTDIALNAGNAMYFLPLKIITHNPADLDADTRLAAYEMLMYELNRTHL--GQGMDIH 175

Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               Q+  I E Q   +   KTG L        AI+ +    E + L  + E + I FQ+
Sbjct: 176 WHNQQEIDITEDQYLEMCACKTGCLARIVARLAAIVTNNEAAESD-LAAYAEEMAIAFQI 234

Query: 224 ADDLLDCE 231
           ADD+LD E
Sbjct: 235 ADDVLDVE 242


>gi|309792042|ref|ZP_07686518.1| Polyprenyl synthetase [Oscillochloris trichoides DG6]
 gi|308225935|gb|EFO79687.1| Polyprenyl synthetase [Oscillochloris trichoides DG6]
          Length = 347

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 14/186 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV         +   A+ + A I+ +H ++LIHDD+   D+  +RRG+PT+  
Sbjct: 55  GKLIRPQLVLLACQAAGGDPALAMPLAAGIQLLHDFTLIHDDIE--DDSDMRRGRPTLWH 112

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIG--LQGMLGGQMLD 166
            +     I AG+G+   A   I     QL D  + ++ +L +       +  +  GQ LD
Sbjct: 113 LWGLAQGINAGDGMFVIAHLAIH----QLSDLGVPAERVLPILRRFDEVILHVCEGQFLD 168

Query: 167 IQDE----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           I  E       E  + MI + KT  L+  +   GA++A A       L  FG +LG+ FQ
Sbjct: 169 ISFEGNLGISTEDYLAMIGR-KTAILIDGSAALGAMVAGADAATVAALSTFGRSLGLAFQ 227

Query: 223 LADDLL 228
           + DD+L
Sbjct: 228 IEDDIL 233


>gi|156974446|ref|YP_001445353.1| hypothetical protein VIBHAR_02161 [Vibrio harveyi ATCC BAA-1116]
 gi|156526040|gb|ABU71126.1| hypothetical protein VIBHAR_02161 [Vibrio harveyi ATCC BAA-1116]
          Length = 236

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 15/173 (8%)

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             +N   A+R+ +A+E +H  SLIHDD+   D   +RRG+  V +++    AI  G+ L+
Sbjct: 5   LGLNDEDAMRLASAVELLHNASLIHDDI--QDGDSLRRGQSAVWVKFGTNVAICTGDYLI 62

Query: 125 TYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMI 180
             AF I   ISSP      N+  QL+ +  + + +   + GQ  D+   E I       I
Sbjct: 63  ARAFGILANISSP------NVLPQLLEATQNAVSV--TVEGQNADLTAKEHISPQNYESI 114

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + K G L+  + E   I +    NE    R    +L I +Q+ DD+ D  ED
Sbjct: 115 AEKKAGPLLALSLELPLI-SSGRLNEIPTARHAASSLAIAYQILDDIKDSVED 166


>gi|90580809|ref|ZP_01236612.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14]
 gi|90438077|gb|EAS63265.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14]
          Length = 323

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLAVLAARALGYDGDKHTTAAAFIEFIHTATLLHDDV--VDESNMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + +  AI+A A    +   + +G  LG  FQL DD+L
Sbjct: 155 DPNTTEDSYMQVIYSKTARLFEASTQIAAIIADAPAEIELAFQEYGRYLGTAFQLIDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|315506436|ref|YP_004085323.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315413055|gb|ADU11172.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 347

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 10/198 (5%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y    GK +R+ L       F       L     +E  H   LIHDD+   D    RRG 
Sbjct: 46  YPRRWGKGLRAALCLATCRAFGGGDAVGLNAAVTVELFHNAFLIHDDI--QDESEQRRGG 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM----LSLTHNIGLQGML 160
            T+H +Y    A+  GN     A   +++ +  L   I  +L     L + H++  Q + 
Sbjct: 104 RTLHAEYGVGVALNVGNMTNLLALRRLAANRAALGSGIAWRLFTETELMMRHSLEGQAIE 163

Query: 161 GGQMLD-IQDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLG 218
            G + D + D  +D    + +   KT    C + C +G ++A   +N  + L  +G  LG
Sbjct: 164 IGWIRDNVCD--LDADDYYRMCLKKTSWYTCIYPCRTGILVATGRENAVDVLDRYGWYLG 221

Query: 219 IIFQLADDLLDCEEDLPK 236
             FQ+ DD L+   D  +
Sbjct: 222 AAFQIQDDALNLTGDYAR 239


>gi|237752690|ref|ZP_04583170.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376179|gb|EEO26270.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 306

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 22/189 (11%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L  GK +RS L    A         ++R+ A IE I   SL+HDD+  +D    RR KP+
Sbjct: 30  LQSGKMLRSKLALSIAG----ESEESVRLCAIIEMIQNASLLHDDV--IDKATTRRNKPS 83

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIIS-----SPK-TQLKDNIRSQLMLSLTHNIGLQGML 160
           V+  + +  AI+ G+ L + AF  ++      P+  ++  N  + L +    ++ L G  
Sbjct: 84  VNALFGDKNAIMLGDVLYSKAFSELTCFAKDYPQIPRIVANAVTTLAIGEIEDVALSGAF 143

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
                       DE +   + + KT AL+     + A +A   + +    + +G NLG+ 
Sbjct: 144 NA----------DEAKYLAMIEHKTAALIEATAYAAAFLAGKDEKDARGFQIYGRNLGVA 193

Query: 221 FQLADDLLD 229
           FQ+ DD+LD
Sbjct: 194 FQIIDDVLD 202


>gi|300741252|ref|ZP_07071273.1| polyprenyl synthetase [Rothia dentocariosa M567]
 gi|300380437|gb|EFJ76999.1| polyprenyl synthetase [Rothia dentocariosa M567]
          Length = 380

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 62/275 (22%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRSFLV 58
           ++ G+ S+ +   + ++  + +   Q  + +    +D L  L AI     GGK++R+ L 
Sbjct: 10  LSDGVKSEQEAYLRAVEATMSEFFAQQRTLLTAISHDALPLLEAIESLSSGGKRLRALLS 69

Query: 59  ------TECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
                     S+   +  T + R GAA+E     +LIHDD+  +D    RRGKP+VH ++
Sbjct: 70  YWGWRGAGGESILERSAPTPIIRAGAALELFQSAALIHDDI--IDRSDTRRGKPSVHKKF 127

Query: 112 DE----------------VTAIIAGNGLLTYAFEIISS------PKTQLK---DNIRSQL 146
           +                    IIAG+  L+++ ++ SS        T+ +   D +R+++
Sbjct: 128 ETQHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARNIFDTMRTEV 187

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACE-----SGA 197
           M              GQ LD+  E I     E  +    ++       ++CE      GA
Sbjct: 188 M-------------AGQYLDVLSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGA 234

Query: 198 I----MAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    +AH      E+ R FG  LG  FQL DD L
Sbjct: 235 LALTAIAHQDHPILEKYRAFGLPLGEGFQLRDDEL 269


>gi|156540259|ref|XP_001602352.1| PREDICTED: similar to CG31005-PA [Nasonia vitripennis]
          Length = 426

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-----LTALRVGAAI-ECIHCYS 86
           T H +    A  Y    GK +R  +    A   N +      L + R  A I E IH  S
Sbjct: 128 TSHEELRTIATYYFGGQGKALRPMVAILMARAINYDKDQSGLLASQRQVAMISEMIHNAS 187

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+  +D    RRGKP+V+  + +    +AG+ +L  A  +I+  + Q  D      
Sbjct: 188 LVHDDV--VDQSDFRRGKPSVNALWSQKKVTMAGDFILAVASMMIA--RLQNDD------ 237

Query: 147 MLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHAS 203
            ++LT +  +  ++ G+ + +   E  +E     + K   KT +L+  + ++ A++  A 
Sbjct: 238 -VTLTLSQVITDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANSAKAVAMLGGAD 296

Query: 204 QNEKERLRCFGENLGIIFQLADDLLD 229
           +   E    +G N+G+ FQL DDLLD
Sbjct: 297 ERLAELAFQYGRNIGLAFQLVDDLLD 322


>gi|309812865|ref|ZP_07706597.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
 gi|308433143|gb|EFP57043.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
          Length = 364

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 35/222 (15%)

Query: 35  HNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
             D +L A+   L GGK++R SFL     +    +    +R  A++E     +L+HDD+ 
Sbjct: 35  QTDLMLDAVATLLRGGKRVRASFLYWGYRAAGGADSDALVRCAASMELFQAAALLHDDV- 93

Query: 94  SMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            MD    RRG P  H                 ++ E  AI+AG+  LT+A E+ ++    
Sbjct: 94  -MDASDTRRGMPAAHRAMAAAHRSRGLDGDADRFGEAGAILAGDLCLTWADEMYATSGLP 152

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195
             +  R + +  L        ++GGQ LD+ +       +   ++++  AL     +S  
Sbjct: 153 ADEVARGRAVFDLMRTQ----LMGGQFLDVLEASTPWATMGTPERIER-ALRVIRFKSAK 207

Query: 196 ---------GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                    GA  A AS +  + L  +G  LG  +QL DDLL
Sbjct: 208 YTMEHPLLIGAASAGASPHVTQALSQYGLALGEAYQLRDDLL 249


>gi|256395788|ref|YP_003117352.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256362014|gb|ACU75511.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 338

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 43/199 (21%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  +          +    +    A+E +H +SL+HDD+  MDN  +RR +P   
Sbjct: 53  GGKALRPAMALLSGRAAGADMARVVPAAVAVEFVHAFSLLHDDV--MDNDRMRRHRPA-- 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG---------- 158
                             A+ +   P   L  +    L   +  + G  G          
Sbjct: 109 ------------------AWTVFGVPAAILAGDALLALAEEVLLDRGTTGAHRAARHIAA 150

Query: 159 ----MLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               ++ GQ LD+      D  +DE  V  + K  T AL   +C  GA++A A       
Sbjct: 151 TTRKLIAGQALDLGFETRTDVSLDECTVMSMDK--TAALFACSCSIGAVLAEAPNRLALA 208

Query: 210 LRCFGENLGIIFQLADDLL 228
           L  FGE+LG+ FQL DDLL
Sbjct: 209 LSGFGEDLGLAFQLVDDLL 227


>gi|288220|emb|CAA79955.1| geranylgeranyl pyrophosphate synthetase [Myxococcus xanthus]
          Length = 361

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 25/238 (10%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           + LQ     ++T L +L  L   + +  +    L  A  Y L   K++R  LV     L 
Sbjct: 20  AWLQLVQTEVETSLAELFELPDEAGLDVRWTQALTQARAYTLRPAKRLRPALVMAGHCLA 79

Query: 66  NVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTAI 117
             + +      R  A +E +H + LIHDD+   D   +RRG P +H      +  E  A+
Sbjct: 80  RGSAVVPSGLWRFAAGLELLHTFLLIHDDV--ADQAELRRGAPPLHRMLAPGRAGEDLAV 137

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDETQ 176
           + G+ L   A E++          +       + + +G+ G    GQ LD+        +
Sbjct: 138 VVGDHLFARALEVMLGSGLTCVAGV-------VQYYLGVSGHTAAGQYLDLDLGRAPLAE 190

Query: 177 VFMIQKMKTGAL------MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           V + Q ++   L       C      A++  AS    E L   G ++G+ +QL DDLL
Sbjct: 191 VTLFQTLRVAHLKTARYGFCAPLVCAAMLGGASSGLVEELERVGRHVGLAYQLRDDLL 248


>gi|302336784|ref|YP_003801990.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301633969|gb|ADK79396.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 356

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 27/200 (13%)

Query: 50  GKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK IR  LV+  A L        AL +GAA+E      LIHDD+  MD   +RRG+ TVH
Sbjct: 48  GKMIRGSLVSLGAGLVAGEAPPAALPLGAAMELFQSALLIHDDI--MDRDTMRRGQSTVH 105

Query: 109 IQY---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             Y                E   I AG+  +  AF +++  +  L      +L+   +  
Sbjct: 106 HYYALEAAKYGTDDAAHLGESLGICAGDVAIFLAFSLVN--EAGLIAGNHHELVGLFSRE 163

Query: 154 IGLQGMLGGQMLDI--QDEFIDE--TQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKE 208
           + + G    QM D+   D + D    +V  + + KTG         +GA++A A +  ++
Sbjct: 164 MSIVGT--AQMSDVAWSDGWGDPNLAEVISLYRYKTGRYTFSLPLSAGALIAGADRRFRD 221

Query: 209 RLRCFGENLGIIFQLADDLL 228
            L  +GE LGI+FQ+ DD L
Sbjct: 222 LLEEYGELLGILFQIRDDEL 241


>gi|15790986|ref|NP_280810.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp.
           NRC-1]
 gi|169236734|ref|YP_001689934.1| multifunctional long-chain (E)-prenyl diphosphate synthase
           [Halobacterium salinarum R1]
 gi|10581569|gb|AAG20290.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp.
           NRC-1]
 gi|167727800|emb|CAP14588.1| putative multifunctional long-chain (E)-prenyl diphosphate synthase
           [Halobacterium salinarum R1]
          Length = 300

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 35/208 (16%)

Query: 47  LLGGKKIRSFLV------------TECASLFNVNHLTALRVGA--------AIECIHCYS 86
           L GGK++R  L             T  A    V    AL  G          +E +H  S
Sbjct: 36  LAGGKRVRPTLTVLVCEAAGGAVWTGAAEAAAVRENAALSAGGEDALDYAVGVELVHNAS 95

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQ 145
           L+ DD+  +D   +RRG  +   +Y     I+A +GLL  AF + S  P+          
Sbjct: 96  LVVDDI--IDRSELRRGSASAWAEYGYGPGIVASDGLLGEAFALFSRDPRA--------- 144

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            M  +T ++   G   G+ +++      E +   + + KTGAL   A E GAI A A   
Sbjct: 145 -MECVTDSLVELGE--GEAIELVARPETEREYMELARRKTGALFRAAAELGAIAADADGR 201

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
             ER   + E +G+ FQ+ DD+LD   D
Sbjct: 202 AVERFGEYAERVGVAFQIRDDVLDATAD 229


>gi|315108190|gb|EFT80166.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2]
          Length = 365

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 44/223 (19%)

Query: 39  LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L A R    GGK++R    +     A+   +     L+  A++E +H  +L+HDDL  M
Sbjct: 43  VLDAARDYTAGGKRLRPAFCYWGHAAAADQPIEPTGLLQAAASLEFLHVSALVHDDL--M 100

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNG----------------LLTYAFEIISSPK---- 135
           D+   RRG P+VH +++    I  G+G                LL ++ ++ +S      
Sbjct: 101 DHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQFGCDIAILLGDLLLMWSSQMFTSAPVKAD 160

Query: 136 -----TQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
                T L D +R+++    +L +T   G+ G      LD+         V  + + K  
Sbjct: 161 RLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDL---------VGRVVEYKCA 211

Query: 187 ALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +      C+ G  +A  S   ++ +  FG  +G  FQ  DDLL
Sbjct: 212 SYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLL 254


>gi|257052502|ref|YP_003130335.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691265|gb|ACV11602.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
          Length = 280

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 19/187 (10%)

Query: 47  LLGGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           L GGK++R   S LV E           A+     +E +H  SL+ DD+  +D    RR 
Sbjct: 36  LAGGKRVRPTVSLLVCEA---VGAEPEDAVDFAVGVELVHNASLVVDDI--IDESDRRRD 90

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            P+    +    A+IA +GL+  AF + S+ +  ++    S+ M+ L      +      
Sbjct: 91  SPSAWSAFGHGPALIASDGLIGEAFALFSTDERAMR--AVSEAMVELGEG---EATELAA 145

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           M D +D +        + + KTGAL   A E GAI A A     E    + E +GI FQ+
Sbjct: 146 MPDSEDAY------RQLARRKTGALFRAAAELGAIAADADARTVEAFGQYAEQVGIAFQI 199

Query: 224 ADDLLDC 230
            DD+LD 
Sbjct: 200 RDDVLDA 206


>gi|302867155|ref|YP_003835792.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302570014|gb|ADL46216.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 347

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 10/198 (5%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y    GK +R+ L       F       L     +E  H   LIHDD+   D    RRG 
Sbjct: 46  YPRRWGKGLRAALCLATCRAFGGGDAVGLNAAVTVELFHNAFLIHDDI--QDESEQRRGG 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM----LSLTHNIGLQGML 160
            T+H +Y    A+  GN     A   +++ +  L   I  +L     L + H++  Q + 
Sbjct: 104 RTLHAEYGVGVALNVGNMTNLLALRRLAANRAALGSGIAWRLFTETELMMRHSLEGQAIE 163

Query: 161 GGQMLD-IQDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLG 218
            G + D + D  +D    + +   KT    C + C +G ++A   +N  + L  +G  LG
Sbjct: 164 IGWIRDNVCD--LDADDYYRMCLKKTSWYTCIYPCRTGILVATGRENAVDVLDRYGWYLG 221

Query: 219 IIFQLADDLLDCEEDLPK 236
             FQ+ DD L+   D  +
Sbjct: 222 AAFQIQDDALNLTGDYAR 239


>gi|289426213|ref|ZP_06427959.1| polyprenyl synthetase [Propionibacterium acnes SK187]
 gi|289426856|ref|ZP_06428582.1| polyprenyl synthetase [Propionibacterium acnes J165]
 gi|295130308|ref|YP_003580971.1| polyprenyl synthetase [Propionibacterium acnes SK137]
 gi|289153378|gb|EFD02093.1| polyprenyl synthetase [Propionibacterium acnes SK187]
 gi|289159945|gb|EFD08123.1| polyprenyl synthetase [Propionibacterium acnes J165]
 gi|291376896|gb|ADE00751.1| polyprenyl synthetase [Propionibacterium acnes SK137]
 gi|313764760|gb|EFS36124.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1]
 gi|313772490|gb|EFS38456.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1]
 gi|313791810|gb|EFS39921.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1]
 gi|313802103|gb|EFS43335.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2]
 gi|313807220|gb|EFS45707.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2]
 gi|313809725|gb|EFS47446.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1]
 gi|313813232|gb|EFS50946.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1]
 gi|313815825|gb|EFS53539.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1]
 gi|313818266|gb|EFS55980.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2]
 gi|313820028|gb|EFS57742.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1]
 gi|313823163|gb|EFS60877.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2]
 gi|313825560|gb|EFS63274.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1]
 gi|313827798|gb|EFS65512.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2]
 gi|313830635|gb|EFS68349.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1]
 gi|313833855|gb|EFS71569.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1]
 gi|313838435|gb|EFS76149.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1]
 gi|314915252|gb|EFS79083.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4]
 gi|314918519|gb|EFS82350.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1]
 gi|314919783|gb|EFS83614.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3]
 gi|314925515|gb|EFS89346.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3]
 gi|314931797|gb|EFS95628.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1]
 gi|314956056|gb|EFT00454.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1]
 gi|314958462|gb|EFT02565.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1]
 gi|314960299|gb|EFT04401.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2]
 gi|314963108|gb|EFT07208.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1]
 gi|314968056|gb|EFT12155.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1]
 gi|314973637|gb|EFT17733.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1]
 gi|314976230|gb|EFT20325.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1]
 gi|314978163|gb|EFT22257.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2]
 gi|314983561|gb|EFT27653.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1]
 gi|314987750|gb|EFT31841.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2]
 gi|314990228|gb|EFT34319.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3]
 gi|315077572|gb|EFT49630.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2]
 gi|315080356|gb|EFT52332.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1]
 gi|315084615|gb|EFT56591.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2]
 gi|315085951|gb|EFT57927.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3]
 gi|315088631|gb|EFT60607.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1]
 gi|315096382|gb|EFT68358.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1]
 gi|315098240|gb|EFT70216.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2]
 gi|315101070|gb|EFT73046.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1]
 gi|327325893|gb|EGE67683.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA2]
 gi|327330588|gb|EGE72334.1| putative polyprenyl synthetase [Propionibacterium acnes HL097PA1]
 gi|327332234|gb|EGE73971.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA3]
 gi|327442612|gb|EGE89266.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2]
 gi|327445334|gb|EGE91988.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2]
 gi|327447790|gb|EGE94444.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1]
 gi|327451078|gb|EGE97732.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3]
 gi|327452840|gb|EGE99494.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1]
 gi|327453567|gb|EGF00222.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2]
 gi|328753112|gb|EGF66728.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1]
 gi|328753766|gb|EGF67382.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1]
 gi|328759144|gb|EGF72760.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2]
 gi|328760374|gb|EGF73943.1| putative polyprenyl synthetase [Propionibacterium acnes HL099PA1]
 gi|332675150|gb|AEE71966.1| bifunctional short chain isoprenyl diphosphate synthase
           [Propionibacterium acnes 266]
          Length = 365

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 44/223 (19%)

Query: 39  LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L A R    GGK++R    +     A+   +     L+  A++E +H  +L+HDDL  M
Sbjct: 43  VLDAARDYTAGGKRLRPAFCYWGHAAAADQPIEPTGLLQAAASLEFLHVSALVHDDL--M 100

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNG----------------LLTYAFEIISSPK---- 135
           D+   RRG P+VH +++    I  G+G                LL ++ ++ +S      
Sbjct: 101 DHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQFGCDIAILLGDLLLMWSSQMFTSAPVKAD 160

Query: 136 -----TQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
                T L D +R+++    +L +T   G+ G      LD+         V  + + K  
Sbjct: 161 RLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDL---------VGRVVEYKCA 211

Query: 187 ALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +      C+ G  +A  S   ++ +  FG  +G  FQ  DDLL
Sbjct: 212 SYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLL 254


>gi|111018984|ref|YP_701956.1| polyprenyl synthetase [Rhodococcus jostii RHA1]
 gi|110818514|gb|ABG93798.1| polyprenyl synthetase [Rhodococcus jostii RHA1]
          Length = 346

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 18/188 (9%)

Query: 41  SAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +A+  A  GGK+ R       A L    +  + +     +E +H  +L HDD+  MD   
Sbjct: 58  AALHLAKAGGKRFRPLFTVLTAQLGPKASDPSVVTAATVVELVHLATLYHDDV--MDEAS 115

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQ--LKDNIRSQLMLSLTHNIG 155
           +RRG P+ + ++    AI+AG+ L  +A  ++S+  P+    + +     +   +   IG
Sbjct: 116 MRRGAPSANSRWGNSVAILAGDYLFAHASRLVSTLGPEAVRIIAETFAELVTGQMRETIG 175

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           L+G         QD          +   KTG+L+      G   + A  +  +RL   G+
Sbjct: 176 LRGE--------QDPV---EHYLKVVWEKTGSLIAACGRFGGTFSGADADHVKRLERLGD 224

Query: 216 NLGIIFQL 223
            +G  FQ+
Sbjct: 225 AVGTAFQI 232


>gi|229891678|sp|P0C9E1|TPRT_ASFWA RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
          Length = 318

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 36/242 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H     +       A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  ++ 
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I     F I  +    L   + E   ++  A+        CFG      FQLADD+ D +
Sbjct: 218 I---PFFKIAFIMGWVLGTGSVEDIGMIERAAH-------CFGN----AFQLADDIKDHD 263

Query: 232 ED 233
            D
Sbjct: 264 TD 265


>gi|113474063|ref|YP_720124.1| trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101]
 gi|110165111|gb|ABG49651.1| Trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101]
          Length = 323

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           + GK+IR     L++    L         R+    E IH  SL+HDD+  +D   IRRG 
Sbjct: 43  VKGKRIRPAIVLLISRTTMLTQEITPKHRRLAEITEMIHTASLVHDDI--VDESEIRRGV 100

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PTVH  +    A++AG+ L   +   +++        + S++++ L      QG+     
Sbjct: 101 PTVHSLFTNRIAVLAGDFLFAQSSWYLANLDNLEVVKLLSKVIMDLAEGEIQQGLHRFNT 160

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            D+  E   E   +     KT +L+  + ++ AI++       + +  +G  +G+ FQ+ 
Sbjct: 161 -DLSIEAYLEKSYY-----KTSSLIANSSKAAAIISDVPPEIVQDMYYYGRYIGLAFQIV 214

Query: 225 DDLLD 229
           DD+LD
Sbjct: 215 DDILD 219


>gi|237786435|ref|YP_002907140.1| putative polyprenyl diphosphate synthase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237759347|gb|ACR18597.1| putative polyprenyl diphosphate synthase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 355

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 19/193 (9%)

Query: 46  ALLGGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           AL GGK++R   + L +        + +  ++    +E  H  +L HDD+  MD    RR
Sbjct: 73  ALAGGKRVRPMFALLASRYGERPGCDDV--IKAAIVVEMTHLATLYHDDV--MDEAEKRR 128

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  + + +++   AI+AG+ +L+ A  +++S   +   +                 ++ G
Sbjct: 129 GADSANFRWNNSVAILAGDFILSAASRLMASLGVKTVKHFSE----------AFGDLVTG 178

Query: 163 QMLD-IQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           QM + I     DE + ++ +   KT  L+  A   GA+ A      ++ L  FGE+LG++
Sbjct: 179 QMRETIGATSGDEIEHYLNVIHEKTAVLIRSAGFLGAMHAGTPAPIQQALATFGEHLGMV 238

Query: 221 FQLADDLLDCEED 233
           FQ+ DD++D   D
Sbjct: 239 FQIVDDMIDIFSD 251


>gi|290955133|ref|YP_003486315.1| geranylgeranyl pyrophosphate synthase [Streptomyces scabiei 87.22]
 gi|260644659|emb|CBG67744.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           scabiei 87.22]
          Length = 452

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 31/210 (14%)

Query: 44  RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           R+AL GGK +R     + +  C          ALRVGAA+E I   +L+HDD+  MD   
Sbjct: 108 RFALDGGKLMRPRFVWWALRACGG-GAAETEAALRVGAALELIQTCALVHDDV--MDASR 164

Query: 100 IRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
           +RRG+  +H                 ++ E  AI+AG+  L +A +I+++  T    +  
Sbjct: 165 LRRGRLALHADIAAQYAGGTAPADGARFGEAAAILAGDLALAWADDIVAATLTTPDTDRA 224

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMA 200
            + + S+        M+ GQ LDIQ +        +      +K+         +     
Sbjct: 225 VRELWSVMRTE----MVAGQYLDIQGQATSSRSLARAIRAACLKSALYSVERPLALGAAL 280

Query: 201 HASQNEKERLRC-FGENLGIIFQLADDLLD 229
             +   + R  C  G  +GI FQL DDL D
Sbjct: 281 AGADAARTRALCSAGRCVGIAFQLRDDLGD 310


>gi|260942339|ref|XP_002615468.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720]
 gi|238850758|gb|EEQ40222.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720]
          Length = 535

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 44/198 (22%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ LL  A   IS 
Sbjct: 236 RLAEIVEMIHTASLLHDDV--IDLSDARRGRPSGNIAFTNKMAVLAGDFLLGRASVAISR 293

Query: 133 --SPKT-----------------QLKDNIRS-----------QLMLSLT---------HN 153
             +P+                  QLK+ + +           +++ + T         ++
Sbjct: 294 LRNPEVVELISTSIANLVEGEFMQLKNTVLTDDKTVNNDGDEKVVPTPTGKVPVEQHEYS 353

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLR 211
           +   G  G       D  +D    + + K  +KT +LM  +  S A+++ A  N  +   
Sbjct: 354 VASPGQSGENGQVSHDTNVDAAFEYYLHKTYLKTASLMSKSARSAAVLSGARDNVVDSCY 413

Query: 212 CFGENLGIIFQLADDLLD 229
            FG NLG+ FQ+ DD+LD
Sbjct: 414 DFGRNLGLCFQIVDDMLD 431


>gi|317969726|ref|ZP_07971116.1| solanesyl diphosphate synthase [Synechococcus sp. CB0205]
          Length = 323

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   + +L     LT+   R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLISRALAPQGELTSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDNLEVVKLLSRVIMDLADGEVKQGLYRYDTG 161

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              + +++++        KT +L+  +  +  +++   +++ + L  FG  LG+ FQ+ D
Sbjct: 162 QSFETYLEKSYC------KTASLIANSARAAGVLSGLPEDQLDCLYRFGRQLGLAFQVVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|121603663|ref|YP_980992.1| trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans
           CJ2]
 gi|120592632|gb|ABM36071.1| Trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans
           CJ2]
          Length = 327

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV       +        + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 48  GGKRLRPALVLLMCGALDYRGAQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRSTAN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++     ++ D    Q +   T+ I    +L  Q++++ 
Sbjct: 106 EIFGNPASVLVGDFLYSRAFQMM----VEVGDMRIMQTLAEATNVIAEGEVL--QLMNMH 159

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E     + + KT  L   +    A++A +S   ++    +G+ LG  FQ+ DD+L
Sbjct: 160 DAGLTEAGYLRVIRSKTAKLFEASARLAALLAQSSPAVEQHCAEYGQALGTAFQVIDDVL 219

Query: 229 DCEEDL 234
           D + ++
Sbjct: 220 DYDGEV 225


>gi|81997099|sp|Q8V9T7|TPRT_ASFM2 RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
 gi|16905412|gb|AAL31326.1|L00966_9 polyprenyl synthetase [African swine fever virus]
          Length = 318

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H     +       A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  ++ 
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I     F I  +    L     E   ++  A+        CFG      FQLADD+ D +
Sbjct: 218 I---PFFKIAFIMGWVLGTGTIEDIGVIERAAH-------CFGN----AFQLADDIKDHD 263

Query: 232 ED 233
            D
Sbjct: 264 TD 265


>gi|269926570|ref|YP_003323193.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790230|gb|ACZ42371.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 345

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H ++L+HDD+   D+   RR +P++        A+ AG+G+   +  ++ S    L+  
Sbjct: 91  LHNFTLVHDDIE--DHSPSRRHRPSLWKLIGVPLALNAGDGMFVISHMVLQS---MLELG 145

Query: 142 IRSQLMLSLTHNIGLQGMLG---GQMLDIQDEFIDETQV----FMIQKMKTGALMCFACE 194
           + +Q +L+       Q  L    GQ +D+  E  +E  +     MI + KTGALM  +C 
Sbjct: 146 VPAQTVLAAIDKFD-QAALSVCEGQHMDLMFEAREEVSLQEYLAMISR-KTGALMGLSCY 203

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            GA++A   +   E+ R FGENLG+ +Q+ DD+
Sbjct: 204 LGALVAGKDECVLEQYRHFGENLGLAYQIRDDI 236


>gi|254520331|ref|ZP_05132387.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA]
 gi|226914080|gb|EEH99281.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA]
          Length = 321

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 16/187 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R   V    S F  N    ++   A IE +H  +L+HDD+  +D+  +RRG+ T+
Sbjct: 44  GGKLLRPAFVL-IGSKFGTNDTEKSIPTAAVIEMLHMATLVHDDV--IDDSKLRRGRETI 100

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--- 164
             +Y +  A+  G+ L    F+I+++  +     + S+ M  +   +G    L  +    
Sbjct: 101 QSKYGKDYAVYIGDYLFCVCFKILATSASLQAIKVDSRAMSKIC--MGEVNQLNSRFSMK 158

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L ++D +++          KT  L   +   GA   +A     + L   G NLG+ FQ+ 
Sbjct: 159 LSVKD-YLNRIS------GKTAELFSISLYLGAAECNADDKVSKELGKIGHNLGMAFQII 211

Query: 225 DDLLDCE 231
           DD+LD E
Sbjct: 212 DDILDYE 218


>gi|119094186|gb|ABL61008.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured marine
           bacterium HF10_25F10]
          Length = 341

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           SK    I+ D +L+    M         +A+ +    GK +R+ +    A L  V+   A
Sbjct: 22  SKSTSEIIHDFILE---RMPAPGQTLADAAMHHFAAPGKMLRAKMALRAADLLKVDRPAA 78

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L   AAIE +H  SL+HDD+   D   +RRG+P V  ++    A+  G+ L+  +FE+ +
Sbjct: 79  LHWAAAIEVLHNASLVHDDI--CDGDQLRRGRPAVWSKFGRDVALTLGDWLIALSFELAA 136


>gi|298707167|emb|CBJ29940.1| solanesyl diphosphate synthase-like protein [Ectocarpus
           siliculosus]
          Length = 479

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 16/161 (9%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++G   E IH  SLIHDD+  +D   +RRG   VH  Y    A++AG+ LL  A  +++ 
Sbjct: 226 QLGQITEMIHVASLIHDDV--LDEAEVRRGGMAVHKLYSNKVAVLAGDYLLARASVLLA- 282

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMC 190
              +L D    ++M +      L  ++ G+++ ++   ++ +D +        KT +L+ 
Sbjct: 283 ---RLGDVQVVEIMAT-----ALDSLVQGEIMQLKMDPEKLLDISLYLRKSYYKTASLIT 334

Query: 191 FACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLD 229
            AC+S AI+       +       +G ++G+ FQ+ DD+LD
Sbjct: 335 NACKSCAILGGHEFDSDVATAAEEYGYHMGLAFQIVDDILD 375


>gi|212276250|ref|NP_001130771.1| hypothetical protein LOC100191875 [Zea mays]
 gi|194690074|gb|ACF79121.1| unknown [Zea mays]
 gi|238009334|gb|ACR35702.1| unknown [Zea mays]
          Length = 245

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 14/151 (9%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +   +   ++        N
Sbjct: 2   IHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------N 51

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198
           + +  ++ L   + ++    G++      F   I      +    KT +L+  + +S +I
Sbjct: 52  LENIEVIKLISQV-IKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASI 110

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +  S    E++  +G NLG+ FQ+ DD+LD
Sbjct: 111 FSGVSTTICEKMYAYGRNLGLSFQVVDDILD 141


>gi|297171910|gb|ADI22897.1| geranylgeranyl pyrophosphate synthase [uncultured Rhizobium sp.
           HF0500_35F13]
          Length = 563

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 11/200 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+  AL GG+   +   T  A L +    TA+    +IE  H  SL+HDD    D+   R
Sbjct: 251 AVYDALTGGQATMAEGATFLAELPDSIRRTAM----SIETFHKASLVHDD--IEDDDDFR 304

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLTHNIGLQGM 159
            G PT+H ++   TAI  G+ L+   +  +S+   QL     + +  ML+  H    +G 
Sbjct: 305 YGDPTMHRRFGIPTAINVGDYLIGMGYRFVSNEAPQLGAAAAADILDMLARAHTRLSEGQ 364

Query: 160 LGGQML--DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            G +++  D  D+ +       I  +KT      A  +G  +A      +E +R F  NL
Sbjct: 365 -GAELMWRDALDKRLAPIDALKIYALKTAPAFEAAVLAGVRLARTVAEIEEPVRGFARNL 423

Query: 218 GIIFQLADDLLDCEEDLPKK 237
           G+ FQ+ +DL D + D   K
Sbjct: 424 GVAFQILNDLGDWKGDADNK 443


>gi|54023707|ref|YP_117949.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
 gi|54015215|dbj|BAD56585.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica
           IFM 10152]
          Length = 383

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 37/212 (17%)

Query: 45  YALLGGKKIR-SFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK+ R +F  T       S         L   AA+E +   +L+HDD+  +D+  
Sbjct: 68  FVLRGGKRTRPAFAWTGWLGAGGSPTAPEADAVLTACAALELVQACALVHDDI--IDSSR 125

Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RR  PTVH+ +++                  AI+ G+  L +A +++ +         R
Sbjct: 126 TRRRFPTVHVDFEQRHRERGWTGDPAHFGVSVAILIGDLALAWADDMVHASGLDAAAIGR 185

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACES----G 196
              + +L        +LGGQ+LDI  E   +  V     I + KT A   +  E     G
Sbjct: 186 FAPVWALMRT----EVLGGQLLDINGEAGRDDSVEAALRINRYKTAA---YTVERPLHLG 238

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A +A A        R FG ++G+ FQL DDLL
Sbjct: 239 AAIADADAELVAAYRTFGTDIGVAFQLRDDLL 270


>gi|255718931|ref|XP_002555746.1| KLTH0G16368p [Lachancea thermotolerans]
 gi|238937130|emb|CAR25309.1| KLTH0G16368p [Lachancea thermotolerans]
          Length = 470

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 43/195 (22%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130
           R+   +E IH  SL+HDD+  +D+   RRG+ + ++ +    A++AG+ LL   T +   
Sbjct: 175 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRASGNVAFTNKMAVLAGDFLLGRATVSISR 232

Query: 131 ISSPKT-----------------QLKDNI-----------------RSQLMLSLTHNIGL 156
           + +P+                  QLK+                    S  + + TH+  +
Sbjct: 233 LRNPEVVELISNSIANLVEGEFMQLKNTAVDSDLTTVANGTQKIPPPSPKLTNPTHDYRV 292

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214
               G      Q+  ID    + + K  +KT +L+  +C + AI++ A +   +    FG
Sbjct: 293 PVERGAVF--SQEIVIDTAFDYYLHKTYLKTASLISKSCRAAAILSGAQETVVDECYNFG 350

Query: 215 ENLGIIFQLADDLLD 229
           +NLGI FQL DD+LD
Sbjct: 351 KNLGICFQLVDDMLD 365


>gi|41410156|ref|NP_962992.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398989|gb|AAS06608.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 335

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + +++   RI+ ++D   L++A  + T+    L  A      GGK+ R       A +  
Sbjct: 20  ATVRDGVGRIEQLMD-TELRSADDIMTESLTHLFKA------GGKRFRPLFTVLSAQIGP 72

Query: 67  VNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 + + GA IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG+ L  
Sbjct: 73  DPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAGDYLFA 130

Query: 126 YAFEIIS--SPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM- 179
            A  ++S   P+  +L     +QL+              GQM + +   +  D  + ++ 
Sbjct: 131 TASRLVSRLGPEAVRLIAETFAQLVT-------------GQMRETRGRKQGSDPIEHYLK 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +   KT  L+  A   GA+ + A  ++ ERL   G  +G  FQ++DD
Sbjct: 178 VVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQISDD 224


>gi|300113550|ref|YP_003760125.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
 gi|299539487|gb|ADJ27804.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
          Length = 339

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 78/188 (41%), Gaps = 18/188 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  LV             +L    AIECI   SLIHDD   +D   IRR +P    
Sbjct: 51  GKRIRGCLVFLMNQTQEGKPEDSLPRAVAIECIQAASLIHDDY--LDEDVIRRKRPATWT 108

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 A++ G+  + +A  I S  +   +D        ++ H I        Q L  Q 
Sbjct: 109 IEGPRRAVLLGD--IMFATAIQSMAELSKEDGA------TVAHAIATVANGAYQELFWQT 160

Query: 170 EFIDETQVFMIQK--------MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           +        +++K        +KTGAL   AC+ GAI A A Q        FG   G  +
Sbjct: 161 KTGKSRAHKLLEKDLYEHIIYLKTGALFGAACQLGAIAAGAHQEVSALAYAFGARTGEAY 220

Query: 222 QLADDLLD 229
           Q+ADDL D
Sbjct: 221 QIADDLED 228


>gi|330448814|ref|ZP_08312461.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328493005|dbj|GAA06958.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 323

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A +E IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLAVLAARALGYDGEKHTTAAAFVEFIHTATLLHDDV--VDESDMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + +  AI+A A    +   + +G  LG  FQL DD+L
Sbjct: 155 DPDTTEDSYMQVIYSKTARLFEASTQIAAIIADAPAEIELAFQEYGRYLGTAFQLIDDVL 214

Query: 229 D 229
           D
Sbjct: 215 D 215


>gi|326203183|ref|ZP_08193049.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986829|gb|EGD47659.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 318

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 15/201 (7%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T  N  L+ AI   +  GGK++R  +V   +    +     +++ +AIE +H  +L+HDD
Sbjct: 24  TSKNQLLVKAIADTVGAGGKRLRPAMVIASSYFGKIRQDRLIKLASAIELLHTATLVHDD 83

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D    RR + TV+ +Y    AI  G+ L T A  +++        +I     L++ 
Sbjct: 84  V--LDYSPFRRNRETVYKKYGTDMAIYCGDFLYTKALLMLA--------DIVPAKHLTIA 133

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGAIMAHASQNEKE 208
               ++ +  G++   +D+++    V    K    KT  L   +C  GA+ A  + +   
Sbjct: 134 AK-AVKTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLFGASCALGALCAKCNHSITN 192

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            L   G   G++FQ+ DD  D
Sbjct: 193 SLSKLGFYYGVMFQMIDDYRD 213


>gi|16801110|ref|NP_471378.1| hypothetical protein lin2044 [Listeria innocua Clip11262]
 gi|16414545|emb|CAC97274.1| lin2044 [Listeria innocua Clip11262]
          Length = 321

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++  G AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLSPDADFEAVKNAGVAIELIHMASIVHDDVVDDAD--LRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|313623140|gb|EFR93406.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL
           J1-023]
          Length = 321

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++  G AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLSPNADFEAVKNAGVAIELIHMASIVHDDVVDDAD--LRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|311900885|dbj|BAJ33293.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 351

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 21/201 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L+ E A+L     +  L   A ++E +H + L+HDDL  +D+  +RRG P+ 
Sbjct: 62  GGKRLRVALLHEAAALVTAGPVPGLDAAALSVELLHTHGLVHDDL--IDDAPLRRGGPST 119

Query: 108 HIQY--------DEVTA--IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           +  Y        D   A  ++AG+     A  ++  P     +   +   +         
Sbjct: 120 YYAYLAEFPDRPDTARALTVLAGDLAAFLAVRVLLGPGGPPPERALAMAAVVADAGAAAV 179

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKM----KTGALMCFACESGAIMAHASQNEKER-LRC 212
           G    Q+LD++ +F        + ++     TG  +      G + A A     +R LR 
Sbjct: 180 GG---QLLDLERDFPPLPDTAFLHEVTAYKSTGYSVLAPLRLGLLAAGADPAPYDRELRG 236

Query: 213 FGENLGIIFQLADDLLDCEED 233
           + E +G+  Q+ DDLLD   D
Sbjct: 237 YAEAVGVANQIHDDLLDLFGD 257


>gi|313618146|gb|EFR90238.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL
           S4-378]
          Length = 321

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++  G AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLSPDADFEAVKNAGVAIELIHMASIVHDDVVDDAD--LRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|224372814|ref|YP_002607186.1| prenyl transferase [Nautilia profundicola AmH]
 gi|223589295|gb|ACM93031.1| prenyl transferase [Nautilia profundicola AmH]
          Length = 287

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+T    + + N   A ++ A +E IH  SL+HDD+  +D    RRG  +++ 
Sbjct: 23  GKGIRGKLIT----IIDPN---AQKLAAVVESIHLASLLHDDV--IDEADTRRGAASINA 73

Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +Y + TA++ G+ + + AF E+I   K   K    +  +LS       QG L    L   
Sbjct: 74  KYGDHTAVMLGDIVYSRAFYELIDFGKDIAKTVSNAVYLLS-------QGELEDVKLSNS 126

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                +  + MI K KT +L+  AC +GAI A   +N   +   +G+N+GI FQ+ DDLL
Sbjct: 127 INLDKDKYMQMIYK-KTASLIEAACAAGAISAGLDRN---KFATYGKNIGIAFQIIDDLL 182

Query: 229 DCEED 233
           D  +D
Sbjct: 183 DITQD 187


>gi|210631749|ref|ZP_03296991.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279]
 gi|210159869|gb|EEA90840.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279]
          Length = 346

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 5/184 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A         AL  G AIE     +LIHDD+   D   +RRG+P ++
Sbjct: 60  GGKRVRPVLALLGAEAVGGCAEQALSSGVAIELFQSAALIHDDI--ADASELRRGEPCLY 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQML 165
             + E  AI AG+  LT  FE++ +  +   D    +  +L+    H +  Q +  G   
Sbjct: 118 RTHGEGLAINAGDLALTRVFEVVLNDASLPGDRRLRVLDELVRMERHTLEGQALDLGWAR 177

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + +      ++MI+       +      GA+ A A+      L   G   G+ FQL D
Sbjct: 178 DGRWDVTSSDYLYMIEGKTAWYTVASPLRIGALAAGAADEAACELVELGRPAGLAFQLQD 237

Query: 226 DLLD 229
           DLL+
Sbjct: 238 DLLN 241


>gi|146417731|ref|XP_001484833.1| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 475

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 38/192 (19%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----- 128
           R+   +E IH  SL+HDD+  M +   RRG+P+ ++ +    A++AG+ LL  A      
Sbjct: 182 RLAEIVEMIHTASLLHDDVIDMSDA--RRGRPSGNVAFTNKMAVLAGDFLLGRASVAIAR 239

Query: 129 ----EIISSPKTQLKDNIRSQLM------LSLTHNIGLQGMLG------GQMLDIQDEF- 171
               E+I    T + + +  + M      L+ + +I   G L       G++   Q E+ 
Sbjct: 240 LRNPEVIELLSTTIANLVEGEFMQLKNTVLNQSSDINNGGELKPVPTPTGKVPTKQHEYS 299

Query: 172 ------ID-ETQV-----FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                 +D ET V     + + K  +KT +LM     + A+++ A  +  +    FG NL
Sbjct: 300 VQTPADVDHETNVNAAFEYYLHKTYLKTASLMSKLARAAAVLSGAQDDVVQNCYDFGRNL 359

Query: 218 GIIFQLADDLLD 229
           G+ FQ+ DD+LD
Sbjct: 360 GLCFQIVDDMLD 371


>gi|227892929|ref|ZP_04010734.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM
           16047]
 gi|227865267|gb|EEJ72688.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM
           16047]
          Length = 326

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 19/229 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           SK  EN   I   L+++       ++T H     + ++ A  GGK +R  L+   A    
Sbjct: 4   SKPWENYPLIANELEEVNDFIQKTIKTPHKSLQAALLQMADNGGKYLRPSLLLLAAHAVG 63

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             +   +++ ++IE +H  +LIHDD+    +   RRG  ++   + +  A+  G+ L T 
Sbjct: 64  KTNERTIKLASSIEILHMATLIHDDIIDDSDE--RRGNVSIQAAFGKDVAVYTGDLLFTD 121

Query: 127 AFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLG--GQMLDIQ---DEFIDETQVFMI 180
            F+++     + +  +R +Q M  +     L G LG   +  +++   D+++ +      
Sbjct: 122 FFDLMLDAIDEHEYLVRNAQTMRKI-----LNGELGQMAERFNLKQTLDDYLRDV----- 171

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            K KT AL   A E GA  A A+  + + L  FGENLGI FQ+ DD+LD
Sbjct: 172 -KGKTAALFRLAAEEGAHFAGANSMQSDALAQFGENLGIAFQMVDDILD 219


>gi|268679951|ref|YP_003304382.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617982|gb|ACZ12347.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 298

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 99/195 (50%), Gaps = 44/195 (22%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L+ + A +       +L++ A +E IH  SL+HDD+  +D+ + RRG+ +++ 
Sbjct: 31  GKRLRAKLILKIAGVSE----ASLKLAAIVELIHAASLLHDDV--IDDAFTRRGESSINA 84

Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +   TAI+ G+ L +  F E+   P+         ++  ++++ + L  +  G++LD+ 
Sbjct: 85  LFGNKTAIMLGDILYSKGFSELTHMPQ---------EVAFTISNAVALLSV--GELLDVD 133

Query: 169 -----DEFIDETQVFMIQKMKTGALM--------CFACESGAIMAHASQNEKERLRCFGE 215
                +E   ET  F +   KT +L+          + ++G I A            +G+
Sbjct: 134 LSHGFNE--SETLYFDMIYKKTASLIEASAKAAALLSGKNGDIYA-----------LYGK 180

Query: 216 NLGIIFQLADDLLDC 230
           NLG+ FQ+ DD+LD 
Sbjct: 181 NLGLAFQIIDDILDI 195


>gi|308197999|ref|XP_001386769.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
           [Scheffersomyces stipitis CBS 6054]
 gi|149388806|gb|EAZ62746.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
           [Pichia stipitis CBS 6054]
          Length = 465

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 41/194 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130
           R+   +E IH  SL+HDD+  + +   RRG+P+ +I +    A++AG+ LL   + A   
Sbjct: 171 RLAEIVEMIHTASLLHDDVIDLSDS--RRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 228

Query: 131 ISSPKT-----------------QLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQDE 170
           + +P+                  QLK+ + S    S+  N G + ++    G++   Q E
Sbjct: 229 LRNPEVIELLSTTIANLVEGEFMQLKNTVMSNDSQSIV-NDGEKKVIPEPTGKVPTKQHE 287

Query: 171 F-------------IDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           +             +D    + + K  +KT +LM  +  + A+++ A  +  E    FG 
Sbjct: 288 YSVSTPAEVDHITNVDAAFEYYLHKTYLKTASLMSKSSRAAAVLSGAHDDIIENCYEFGR 347

Query: 216 NLGIIFQLADDLLD 229
           NLG+ FQ+ DD+LD
Sbjct: 348 NLGLCFQIVDDMLD 361


>gi|118618810|ref|YP_907142.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           ulcerans Agy99]
 gi|118570920|gb|ABL05671.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           ulcerans Agy99]
          Length = 340

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 47/178 (26%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTY 126
           H ++LIHDD+  +D    RRG+P  HI                Q+    AI+ G+    +
Sbjct: 65  HAWALIHDDV--IDASSTRRGRPMAHIHFAALHRDRNWLGPAQQFGISAAILIGDVAQAW 122

Query: 127 AFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
           A +IIS       SP  Q +      +IR+++             LGGQ LDI  E    
Sbjct: 123 ADDIISRVSQSSLSPDAQRRVQRVWSDIRTEV-------------LGGQYLDIVAEASAA 169

Query: 175 TQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             +     + T    C+        GA  A    + +E    FG +LG+ FQL DD+L
Sbjct: 170 DSITSAMTVATFKTACYTVSRPLQLGAAAAADRPDVQEAFHQFGTDLGVAFQLRDDVL 227


>gi|302525469|ref|ZP_07277811.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4]
 gi|302434364|gb|EFL06180.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4]
          Length = 375

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 31/209 (14%)

Query: 45  YALLGGKKIR---SFLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK+IR   ++     A       L   AL+  A++E I   +LIHDDL  +D+  
Sbjct: 58  FVLGGGKRIRPTFAWWGWRGAGGAASGPLAEGALQAVASLELIQACALIHDDL--IDSSD 115

Query: 100 IRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG+PTVH+  +++                +A++ G+  L +A ++ +      +    
Sbjct: 116 SRRGRPTVHVAAEKLHAGRGWLGSPSVFGLASAVLVGDLALAWADDMFAEAPLPAETIAA 175

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMC-FACESGAIM 199
           ++             +L GQ LD++ + + +        I ++KT A         GA +
Sbjct: 176 ARPAWRAMRTE----VLAGQYLDVRTQAVGDASPEAALRIDRLKTAAYTVQRPLHLGASL 231

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228
           A A +     L  FG ++G+ FQL DDLL
Sbjct: 232 AGADEQLIATLLEFGGDVGVAFQLRDDLL 260


>gi|49259554|pdb|1VG2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima A76y Mutant
          Length = 299

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H YSL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLYSLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|108797750|ref|YP_637947.1| trans-hexaprenyltranstransferase [Mycobacterium sp. MCS]
 gi|108768169|gb|ABG06891.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. MCS]
          Length = 335

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A L        + V GA IE +H  +L HDD+  MD   +RRG P+ 
Sbjct: 55  GGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+ L   A  ++S    +    I       +T          GQM + 
Sbjct: 113 NARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVT----------GQMRET 162

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   E +DE + ++ +   KT  L+  +   GA  + A + + ERL   G  +G  FQ++
Sbjct: 163 RGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQIS 222

Query: 225 DD 226
           DD
Sbjct: 223 DD 224


>gi|225436206|ref|XP_002268229.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 321

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++I      A++AG+ LL+ A   ++S K    
Sbjct: 70  EMIHVASLLHDDV--LDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNT-- 125

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S L   + H +  + M   QM    ++ +           KT +L+  +C++ A++
Sbjct: 126 -EVVSLLATVVEHLVTGETM---QMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIALL 181

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  +         +G+NLG+ FQL DD+LD
Sbjct: 182 AGQTAEVSMLAFEYGKNLGLAFQLIDDVLD 211


>gi|126433376|ref|YP_001069067.1| trans-hexaprenyltranstransferase [Mycobacterium sp. JLS]
 gi|126233176|gb|ABN96576.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. JLS]
          Length = 325

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A L        + V GA IE +H  +L HDD+  MD   +RRG P+ 
Sbjct: 45  GGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+ L   A  ++S    +    I       +T          GQM + 
Sbjct: 103 NARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVT----------GQMRET 152

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   E +DE + ++ +   KT  L+  +   GA  + A + + ERL   G  +G  FQ++
Sbjct: 153 RGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQIS 212

Query: 225 DD 226
           DD
Sbjct: 213 DD 214


>gi|119866839|ref|YP_936791.1| trans-hexaprenyltranstransferase [Mycobacterium sp. KMS]
 gi|119692928|gb|ABL90001.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. KMS]
          Length = 342

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A L        + V GA IE +H  +L HDD+  MD   +RRG P+ 
Sbjct: 62  GGKRFRPLFTVLSARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 119

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+ L   A  ++S    +    I       +T          GQM + 
Sbjct: 120 NARWGNNIAILAGDYLFATASRLVSRLGPEAVRIIADTFAQLVT----------GQMRET 169

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   E +DE + ++ +   KT  L+  +   GA  + A + + ERL   G  +G  FQ++
Sbjct: 170 RGAVEGVDEIEHYLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQIS 229

Query: 225 DD 226
           DD
Sbjct: 230 DD 231


>gi|25011822|ref|NP_736217.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           NEM316]
 gi|77413688|ref|ZP_00789872.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515]
 gi|24413363|emb|CAD47442.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160288|gb|EAO71415.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515]
          Length = 326

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 32/199 (16%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R    +L ++  +  N +     ++ A++E +H  +LIHDD+  +D+  +RRG  
Sbjct: 44  GGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNM 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII-----SSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           T+  ++ +  A+  G+ L T  F++I      +P  ++  N +S           ++ +L
Sbjct: 102 TIQSKFGKDIAVYTGDLLFTVFFDLILESMADTPFMRI--NAKS-----------MRKIL 148

Query: 161 GGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE-- 215
            G++  +   +  +  +    +    KT  L   A + GA    A   EKE +R  G   
Sbjct: 149 MGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGA---EKEVVRLAGHIG 205

Query: 216 -NLGIIFQLADDLLDCEED 233
            N+G+ FQ+ DD+LD   D
Sbjct: 206 FNIGMTFQILDDILDYTAD 224


>gi|291449814|ref|ZP_06589204.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces
           albus J1074]
 gi|291352763|gb|EFE79665.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces
           albus J1074]
          Length = 209

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +  TAL    A+E +H +SL+HDD+  MD   +RR +P V 
Sbjct: 82  GGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDI--MDGDPLRRRRPAVW 139

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             Y    A++AG+ L   A + ++ +P  +    +R    LS T    L  ++ GQ  D+
Sbjct: 140 RAYGVGPAVLAGDALHALAVQTLAEAPGERAPAAVRH---LSRT----LTALVRGQADDL 192

Query: 168 QDEFIDET 175
           + E +  T
Sbjct: 193 RFEELPWT 200


>gi|229891677|sp|P0C9E0|TPRT_ASFP4 RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
          Length = 318

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H     +       A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  ++ 
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I     F I  +    L     E   ++  A+        CFG      FQLADD+ D +
Sbjct: 218 I---PFFKIAFIMGWVLGTGTIEDIGMIERAAH-------CFGN----AFQLADDIKDHD 263

Query: 232 ED 233
            D
Sbjct: 264 TD 265


>gi|114049915|emb|CAK50932.1| putative polyprenyl synthetase [Streptomyces ambofaciens]
 gi|114050137|emb|CAK51170.1| putative polyprenyl synthetase [Streptomyces ambofaciens]
          Length = 362

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 29/247 (11%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-----AIRYALLGGKKIRSFLVT 59
           +P +  + ++R +T  +    + A       + R            +L GGK++R  ++ 
Sbjct: 11  IPERFADCARRFNTRFEQYFRELADSFDAPPSSRFTPECLDLLRDLSLRGGKRLRVAMLY 70

Query: 60  ECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---- 114
           E A L   + +  L   A  +E +  + L+HDD+  +D+G +RRG P+ +  Y E     
Sbjct: 71  EAARLVTPDPVPGLEEAALGVELLQTHGLVHDDI--IDDGPVRRGGPSTYYAYREQFPDR 128

Query: 115 ------TAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
                  A++AG+  L  +  + + SP      + R  ++  L  +     M+ GQ+ DI
Sbjct: 129 PQDALGLAVLAGDLALVLSLRVLLDSPAPP---SARHAMVGVL--SAAASAMIAGQITDI 183

Query: 168 QDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQ 222
           + +F     E  +  +   KT      A     ++A      +    LR +   +GI   
Sbjct: 184 ERDFTHLPSEELLHAVSDYKTAHYSILAPVQLGLLAAGEDPARFDAELRRYARLVGIYET 243

Query: 223 LADDLLD 229
           + DD LD
Sbjct: 244 MRDDYLD 250


>gi|239977900|ref|ZP_04700424.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 312

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 10/128 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +  TAL    A+E +H +SL+HDD+  MD   +RR +P V 
Sbjct: 82  GGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDI--MDGDPLRRRRPAVW 139

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             Y    A++AG+ L   A + ++ +P  +    +R    LS T    L  ++ GQ  D+
Sbjct: 140 RAYGVGPAVLAGDALHALAVQTLAEAPGERAPAAVR---HLSRT----LTALVRGQADDL 192

Query: 168 QDEFIDET 175
           + E +  T
Sbjct: 193 RFEELPWT 200


>gi|284037886|ref|YP_003387816.1| trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74]
 gi|283817179|gb|ADB39017.1| Trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74]
          Length = 324

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 12/182 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V   A +         R  + IE +H  +L+HDD+  +D    RRG  +++ 
Sbjct: 46  GKQLRPMFVFLMAGVCGSITEATYRGASLIELLHTATLVHDDV--VDESNYRRGFFSINA 103

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDI 167
            +    A++ G+ LL+    ++ S      D +R  S  +  L+    LQ +   + LDI
Sbjct: 104 LWKNKVAVLVGDYLLSRG--LLLSVDNNDFDLLRIVSTAVRELSEGELLQ-LYKARRLDI 160

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            ++   E     I + KT +L+   C  GA  A       E+   FGE +GI FQ+ DDL
Sbjct: 161 TEDIYYE-----IIRQKTASLIAACCAVGARSAGIDPQVVEKAHAFGEKVGIAFQIKDDL 215

Query: 228 LD 229
            D
Sbjct: 216 FD 217


>gi|11465734|ref|NP_053878.1| prenyl transferase [Porphyra purpurea]
 gi|1709766|sp|P51268|PREA_PORPU RecName: Full=Prenyl transferase
 gi|1276734|gb|AAC08154.1| prenyl transferase [Porphyra purpurea]
          Length = 323

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 21/210 (10%)

Query: 33  TQHNDRLLSAIRYALL----------GGKKIRS---FLVTECASLFNVNHLTALRVGAAI 79
            +HN + ++  R+ +L          GGK++R     LV +  S          R+    
Sbjct: 18  VEHNLKSVAGTRHPILYAAAKHLFEAGGKRLRPAIVLLVAKSTSEQQEIKPGQRRLAEIT 77

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D    RRG+ TVH  ++   A++AG+ L   +   +++      
Sbjct: 78  EIIHTASLVHDDV--IDECSTRRGEKTVHKLFNTKIAVLAGDFLFAQSSWYLANIGNLEV 135

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + ++++         QG++        D++I+++        KT +L+  +C   A++
Sbjct: 136 VKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEKSF------YKTASLVAASCRGAAML 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
              +      L  +G+++G+ FQ+ DD+LD
Sbjct: 190 NDLNSQMHNDLYLYGKHMGLAFQIMDDVLD 219


>gi|156086492|ref|XP_001610655.1| polyprenyl synthetase superfamily protein [Babesia bovis T2Bo]
 gi|154797908|gb|EDO07087.1| polyprenyl synthetase superfamily protein [Babesia bovis]
          Length = 457

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 22/167 (13%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            LR+  + E +H  SL+HDD+  +D+  +RR  P VH++     A++ G+ +LT A   +
Sbjct: 194 VLRLLQSYEIVHIGSLMHDDV--LDSANLRRRMPAVHVKAGVKIAVLVGDLMLTRACSTV 251

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK-----TG 186
           +        N+ SQ+ L++  +  L+ ++ G++  +  E  D  +  M   +K     T 
Sbjct: 252 A--------NLGSQV-LTVRMSKALENLIKGEITTV--EGTDNVESMMCNYLKKTFLKTA 300

Query: 187 ALMCFACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLDCE 231
           +L+   C S  I +   Q+E    +C+  G ++G+ FQ+ DDLLD E
Sbjct: 301 SLIAECCAS--IASLLRQDEITCHKCYLLGLHVGMAFQIYDDLLDYE 345


>gi|145346108|ref|XP_001417536.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577763|gb|ABO95829.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 332

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RRG   ++++     AI+AG+ LL  A   ++S
Sbjct: 75  RLAEIAEMIHVASLLHDDV--LDNAATRRGLRALNLEVGNKLAILAGDFLLARASVTLAS 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +      + S+++  L     +Q     + L   D ++ +T        KT +L+  + 
Sbjct: 133 LRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMDHYVKKTY------YKTASLIANSS 186

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++ A++    +   +    +G+NLG+ FQ  DD+LD
Sbjct: 187 KAIALLGGHGEESAQLAYDYGKNLGLAFQFQDDVLD 222


>gi|255535323|ref|YP_003095694.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341519|gb|ACU07632.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
           3519-10]
          Length = 325

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 16/211 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L +   +   Q N  LL  +   ++   GK++R   V  CA L         R  + IE 
Sbjct: 18  LFEQKFYESMQSNVPLLDKVTRFIVTTKGKQMRPMFVFLCAKLVGSVTDKTFRGASMIEL 77

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  +L+HDD+  +D  + RR   +++  +    A++ G+ LL+ A  ++S+      D+
Sbjct: 78  IHTATLVHDDV--VDESFKRRNFFSINALWKNKIAVLVGDYLLSKAV-LLST------DH 128

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198
               L+  ++  I  + M  G++L ++      I E   + I + KT  L+   CE G  
Sbjct: 129 KDYDLLAVISRTI--REMAEGELLQLEKARKLDITEEVYYEIIRQKTATLIAACCEIGVR 186

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                +    ++  FG   G+ FQ+ DDL D
Sbjct: 187 SNSDDEVLAAKMMEFGTLTGMAFQIKDDLFD 217


>gi|156839045|ref|XP_001643218.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113818|gb|EDO15360.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 332

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 28/223 (12%)

Query: 24  LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L++      + + D + S   Y A   GK  RS LV      + ++    L +   +  +
Sbjct: 7   LVEGKPIWSSDYEDIVQSPYNYLAQQPGKNFRSLLVKTFNQFYGLDEEQILLIDKLVGIL 66

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDN 141
           H  SL+ DD+   DN  IRRG  T H++Y     I + N +   A E++    K  +KD+
Sbjct: 67  HTASLLIDDIE--DNSVIRRGMETAHLKYGIPMTINSANYMYFKAMEVLQDISKLHIKDS 124

Query: 142 IRSQLMLSLTHNIGLQGML-----------GGQMLDI--QDEF----IDETQVFMIQKMK 184
            +      + HN+ L+ ++            GQ LDI  +D F     DE   F +   K
Sbjct: 125 PQ------IDHNVLLKELMIIFNEELINLHRGQALDIYWRDTFPEIIPDEDMYFNMVMNK 178

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           TG L   A      +   S++ K  L      LGI++Q+ DDL
Sbjct: 179 TGGLFRLAVRIMETLNGNSKDSKS-LVPLANLLGILYQVRDDL 220


>gi|22537877|ref|NP_688728.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           2603V/R]
 gi|76799379|ref|ZP_00781535.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           18RS21]
 gi|77408798|ref|ZP_00785527.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           COH1]
 gi|22534773|gb|AAN00601.1|AE014270_19 polyprenyl synthetase family protein [Streptococcus agalactiae
           2603V/R]
 gi|76585273|gb|EAO61875.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           18RS21]
 gi|77172579|gb|EAO75719.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           COH1]
          Length = 326

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 28/197 (14%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R    +L ++  +  N +     ++ A++E +H  +LIHDD+  +D+  +RRG  
Sbjct: 44  GGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNM 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGG 162
           T+  ++ +  A+  G+ L T  F++I  S   T  ++ N +S           ++ +L G
Sbjct: 102 TIQSKFGKDIAVYTGDLLFTVFFDLILESMADTPFMRINAKS-----------MRKILMG 150

Query: 163 QMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE---N 216
           ++  +   +  +  +    +    KT  L   A + GA    A   EKE +R  G    N
Sbjct: 151 ELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGA---EKEVVRLAGHIGFN 207

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQ+ DD+LD   D
Sbjct: 208 IGMTFQILDDILDYTAD 224


>gi|168700708|ref|ZP_02732985.1| polyprenyl synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 599

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 22/210 (10%)

Query: 42  AIRYALL--GGKKIRSFLVTEC--------ASLFN-----VNHLTALRVGAAIECIHCYS 86
           AI Y  L  GGK+ R F+            A+L +      +H+   R   AIE  H  S
Sbjct: 272 AIAYDFLARGGKRSRPFITLAAYDALKGAPATLADSGWELPDHVK--RAAVAIEAFHKAS 329

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+   D+ Y R G  T+H  Y   TAI  G+ L+   ++ +S  +  L   + + +
Sbjct: 330 LVHDDIED-DDAY-RYGAETLHRTYGVGTAINVGDYLIGVGYKCVSRDRKALGAEVAADV 387

Query: 147 MLSLTH-NIGLQGMLGGQML--DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           +  L   +I L    G ++L  + +D+ +       I  +KT      A  +G  +A  +
Sbjct: 388 LDKLADAHIKLSEGQGAELLWREAKDKSLTTLDALKIYALKTSPAFEAALYTGVRLAGEA 447

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
              ++ +  F  N+G+ FQ+ +D+ D   D
Sbjct: 448 TAYEKLIADFSRNVGVAFQILNDIKDWTGD 477


>gi|77405958|ref|ZP_00783037.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           H36B]
 gi|77411623|ref|ZP_00787964.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           CJB111]
 gi|77162340|gb|EAO73310.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           CJB111]
 gi|77175410|gb|EAO78200.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           H36B]
          Length = 326

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 22/194 (11%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R    +L ++  +  N +     ++ A++E +H  +LIHDD+  +D+  +RRG  
Sbjct: 44  GGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNM 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++ +  A+  G+ L T  F++I      L+    +  M    +   ++ +L G++ 
Sbjct: 102 TIQSKFGKDIAVYTGDLLFTVFFDLI------LESMADTPFMT--INAKSMRKILMGELD 153

Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGI 219
            +   +  +  +    +    KT  L   A + GA    A   EKE +R  G    N+G+
Sbjct: 154 QMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGA---EKEVVRLAGHIGFNIGM 210

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD+LD   D
Sbjct: 211 TFQILDDILDYTAD 224


>gi|58699102|ref|ZP_00373935.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534385|gb|EAL58551.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 120

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           GGQ LDI  +F    ++  I  MKT  L   +CE GAI+  A+  ++  L  FG NLG+I
Sbjct: 1   GGQALDIDTDF---NKIKEIHLMKTAKLFAASCEIGAIIGGATDEQRRALYNFGINLGLI 57

Query: 221 FQLADDLLDCEED 233
           FQ  DD+ D E+D
Sbjct: 58  FQAKDDIEDYEQD 70


>gi|296090181|emb|CBI40000.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++I      A++AG+ LL+ A   ++S K    
Sbjct: 171 EMIHVASLLHDDV--LDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNT-- 226

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S L   + H +  + M   QM    ++ +           KT +L+  +C++ A++
Sbjct: 227 -EVVSLLATVVEHLVTGETM---QMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIALL 282

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  +         +G+NLG+ FQL DD+LD
Sbjct: 283 AGQTAEVSMLAFEYGKNLGLAFQLIDDVLD 312


>gi|254430804|ref|ZP_05044507.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001]
 gi|197625257|gb|EDY37816.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001]
          Length = 323

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 19/188 (10%)

Query: 49  GGKKIRSFLVTECASLFNVN-HLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   +     +  LT    R+    E IH  SL+HDD+  +D    RRG  
Sbjct: 44  GGKRLRPGIVLLLSRAVAPDGELTPRHRRLAEITEMIHTASLVHDDV--VDEAATRRGVD 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TVH +++   A++AG+ L   A   +++        + S++++ L      QG+      
Sbjct: 102 TVHSRFNHRVAVLAGDFLFAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLFR---- 157

Query: 166 DIQDEFIDETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                  D TQ F   ++K   KT +L+  +  +  +++       + L  FG  LG+ F
Sbjct: 158 ------YDTTQSFETYLEKSYCKTASLIANSARAAGVLSGLPAPRLDDLYRFGRQLGLAF 211

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 212 QVVDDILD 219


>gi|190346389|gb|EDK38464.2| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 475

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 38/192 (19%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----- 128
           R+   +E IH  SL+HDD+  M +   RRG+P+ ++ +    A++AG+ LL  A      
Sbjct: 182 RLAEIVEMIHTASLLHDDVIDMSDA--RRGRPSGNVAFTNKMAVLAGDFLLGRASVAIAR 239

Query: 129 ----EIISSPKTQLKDNIRSQLM------LSLTHNIGLQG------MLGGQMLDIQDEF- 171
               E+I    T + + +  + M      L+ + +I   G         G++   Q E+ 
Sbjct: 240 LRNPEVIELLSTTIANLVEGEFMQLKNTVLNQSSDINNGGESKPVPTPTGKVPTKQHEYS 299

Query: 172 ------ID-ETQV-----FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                 +D ET V     + + K  +KT +LM  +  + A+++ A  +  +    FG NL
Sbjct: 300 VQTPADVDHETNVNAAFEYYLHKTYLKTASLMSKSARAAAVLSGAQDDVVQNCYDFGRNL 359

Query: 218 GIIFQLADDLLD 229
           G+ FQ+ DD+LD
Sbjct: 360 GLCFQIVDDMLD 371


>gi|164690689|dbj|BAF98639.1| geranylgeranyl diphosphate synthase [Streptomyces argenteolus]
          Length = 360

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 42/250 (16%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRS---FLVTEC 61
           L+E  + ++ +L + + Q  + +    +  +  A+R    + L GGK+IR+   +     
Sbjct: 12  LEEVRQPVNAVLREFIEQQQNSIPPDVD--IGPAVRALGDFVLHGGKRIRAALCYWGWRG 69

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------- 110
           A   + +  +A R  AA+E  HC+ LIHDD+  +D    RRG+P++H Q           
Sbjct: 70  AGGGDEDLTSAYRAAAALEVCHCFGLIHDDI--IDGTATRRGRPSLHCQLASLHEQAGWH 127

Query: 111 -----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                +   +A++ G+  L +A E++++  ++ +      + + L ++      + GQML
Sbjct: 128 GDAAAFGRSSALLMGDLCLFWADELLTTACSEER-----LVEVRLEYSGMRVAEVCGQML 182

Query: 166 DI---QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLG 218
           ++        D +    +   KT     +A E     G  +A +S   ++    FG  LG
Sbjct: 183 EMIVQASRDFDVSSGMTVAHYKTAK---YATERPLQIGGRLAGSSAELRKSYAAFGLPLG 239

Query: 219 IIFQLADDLL 228
             FQL DD+L
Sbjct: 240 EAFQLRDDIL 249


>gi|91786742|ref|YP_547694.1| trans-hexaprenyltranstransferase [Polaromonas sp. JS666]
 gi|91695967|gb|ABE42796.1| Trans-hexaprenyltranstransferase [Polaromonas sp. JS666]
          Length = 327

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 8/186 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+                + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 48  GGKRLRPALLLLMCGALGYRGDQRYNLAAVVEFIHTATLLHDDV--VDESTLRRGRATAN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++         ++R    L+   N+  +G +  Q++++ 
Sbjct: 106 EAFGNPASVLVGDFLYSRAFQMMVE-----AGDMRVMQTLAEATNVIAEGEVL-QLMNMH 159

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E     + + KT  L   +    A++A +    ++    +G+ LG  FQ+ DD+L
Sbjct: 160 DATLSEDGYLRVIRSKTAKLFEASARLAALLAQSPPPVEQSCADYGQALGTAFQVIDDVL 219

Query: 229 DCEEDL 234
           D + D+
Sbjct: 220 DYDGDV 225


>gi|189500392|ref|YP_001959862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
 gi|189495833|gb|ACE04381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
          Length = 324

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%)

Query: 43  IRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +RY L   GK+IR  LV   A +         R     E +H  +LIHDD+  +D   +R
Sbjct: 36  VRYILKQQGKQIRPLLVMLGAKVCGGVEEKTYRAAIMAELLHSATLIHDDV--VDGAEMR 93

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RG  +++  +    +++ G+ +L+    F +         DN +  L L +  +  ++ M
Sbjct: 94  RGIASINAVWKNKISVLIGDYMLSKGLLFSL---------DN-KDYLFLHMV-STAVRRM 142

Query: 160 LGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             G++L IQ      I E     +   KT +L+  +   GA      + +   L+ +GE 
Sbjct: 143 SEGEILQIQKTRSLDITEEDYLRVISDKTASLLSTSSAMGAASVTDDEVKINALKSYGEY 202

Query: 217 LGIIFQLADDLLDCEEDLPK 236
           LG+ FQ+ DDLLD   D  K
Sbjct: 203 LGLAFQIRDDLLDYTGDSKK 222


>gi|158338022|ref|YP_001519198.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017]
 gi|158308263|gb|ABW29880.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017]
          Length = 323

 Score = 58.5 bits (140), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  +V   + +L     LT    R+    E IH  SL+HDD+  +D+  +RRG P
Sbjct: 44  GGKRMRPAIVLLLSRALLPDQDLTPRHRRLAEITEMIHTASLLHDDV--VDDSGVRRGVP 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +VH  +    AI AG+ L   A   +++      DN+    +LS       +G +  Q +
Sbjct: 102 SVHSLFGNRIAIQAGDFLFAQASWYLAN-----LDNLEVVKLLSEVIKDFAEGEIQ-QGI 155

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  D  +           KT +LM  + ++  +++  S    + L  +G  +G+ FQ+ D
Sbjct: 156 NCFDTSLTLEAYLEKSYYKTASLMANSAKAAGVLSGTSLQVNQDLYAYGRCVGLAFQIVD 215

Query: 226 DLLD 229
           D+LD
Sbjct: 216 DILD 219


>gi|325474098|gb|EGC77286.1| polyprenyl synthetase [Treponema denticola F0402]
          Length = 344

 Score = 58.5 bits (140), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  L      L   +   A  +   IE  H  SL+HDD+   D    RRG P  H
Sbjct: 58  GGKRWRPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDI--EDKSDTRRGAPAAH 115

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
           I+Y   TA+ + + L   A   + +   +  +++R+++    + N  L+ +  GQ +DI 
Sbjct: 116 IKYGLDTALNSASWLYFEALNPLIN--YEASESVRAEIYSLYSQN--LRRLHLGQSMDIG 171

Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                D      +   +  +KTG+L   A E G I A    NE         ++GI FQ+
Sbjct: 172 WHSNPDIIPSVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMGIGFQI 231

Query: 224 ADDLLDCEE 232
            DD+ +  E
Sbjct: 232 LDDVKNITE 240


>gi|182433853|ref|YP_001821572.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|182440870|ref|YP_001828589.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178462369|dbj|BAG16889.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178469386|dbj|BAG23906.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 402

 Score = 58.5 bits (140), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 29/206 (14%)

Query: 45  YALLGGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           +AL GGK++R  L+     +        ALR+G A+E I   +LI DD+  MD  + RRG
Sbjct: 77  FALRGGKRMRPLLLWWAMRACSGAESEAALRLGVALELIQTCALIQDDV--MDRSHTRRG 134

Query: 104 KPTVHIQYDEVTAIIAGNG----------------LLTYAFEIISSPKTQLKDNIRSQLM 147
           +P VHI   E   + AG+G                 L +A + +   +T L    R Q+ 
Sbjct: 135 RPAVHIALAEQRGLAAGSGPGAAFGASAAVLAGDLALVWADDTVG--ETFLPPGRRRQVR 192

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
                  G   M+ GQ LD++ +        +      +K+ AL           A A  
Sbjct: 193 ALWRSMRGE--MIAGQYLDLRGQIGGGASAARALRTAHLKS-ALYSVERPVALGAALAGA 249

Query: 205 NE--KERLRCFGENLGIIFQLADDLL 228
           +E   + LR      G+ FQL DDLL
Sbjct: 250 DEWTTDALRSASRYAGMAFQLRDDLL 275


>gi|332297374|ref|YP_004439296.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168]
 gi|332180477|gb|AEE16165.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168]
          Length = 348

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 13/164 (7%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +   +E +H  SLIHDD+   D    RRG P  HI +   TAI AG+ L   A   +
Sbjct: 85  AYEITPLVEFVHTASLIHDDI--EDCADTRRGMPAAHITWGIDTAINAGSWLYFTAAACL 142

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ------KMKT 185
               T +      +L L   +   L+ +  GQ +DI     D T +  +Q      +MKT
Sbjct: 143 ----TNVPLPAERKLALYRLYAEELRRLHLGQAMDIA-WHKDNTALPSVQEYEAMVRMKT 197

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           G L   A ++G ++   +  ++  +     ++G+ FQ+ DD+L+
Sbjct: 198 GTLAALAAKAGTLVGGGTAEQESVMGNAAADIGVGFQILDDVLN 241


>gi|254293445|ref|YP_003059468.1| trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814]
 gi|254041976|gb|ACT58771.1| Trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814]
          Length = 340

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 11/185 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  +    A          L  + AA+E IH  +L+HDD+  +D   +RRGK   
Sbjct: 58  GGKRLRPLITLAAAYAAGGKGSAPLHSLAAAVEYIHTATLLHDDV--VDESDLRRGKKAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            + +    +I+ G+ L   AF ++   ++ ++ D + +   +     +     +G   L 
Sbjct: 116 KMLWGNSASILVGDFLFARAFTLMVETRSLRILDILSNASCVIAEGEVKQLAAIGKADLP 175

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           I+D ++D      I + KT AL   A  +GA+   A   E + L  +G  LG  FQL DD
Sbjct: 176 IED-YMD------IVEAKTAALFEAAARAGALTVVAEGKESDGLAEYGRRLGRAFQLVDD 228

Query: 227 LLDCE 231
            LD +
Sbjct: 229 ALDYD 233


>gi|300709739|ref|YP_003735553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
 gi|299123422|gb|ADJ13761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
          Length = 280

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 15/189 (7%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           AL GGK++R  +              A+  G  IE +H  SL+ DD+  +D   +RRG  
Sbjct: 35  ALSGGKRVRPTVTVLVCEAVGGEPDDAVGFGVGIELVHNASLVIDDI--IDRSAMRRGVE 92

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           +   +Y    AI+  +  L  AF + SS P+        ++ M+ L           G+ 
Sbjct: 93  SAWTRYGYGPAIVGSDAQLGEAFALFSSDPRAT---QAVTEAMVELGE---------GEA 140

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            ++      E +   + + KTGAL   A E GAI A A     E +  + E +GI FQ+ 
Sbjct: 141 TELVARPETEAEYMELARRKTGALFRAAAELGAIAADADAVTVEAVGEYAERVGIAFQIR 200

Query: 225 DDLLDCEED 233
           DD+LD   D
Sbjct: 201 DDVLDATAD 209


>gi|217419927|ref|ZP_03451433.1| polyprenyl synthetase [Burkholderia pseudomallei 576]
 gi|217397231|gb|EEC37247.1| polyprenyl synthetase [Burkholderia pseudomallei 576]
          Length = 363

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%)

Query: 50  GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GKKIR  L+   ASLF  +        + A+    ++E +H  +LIHDD+  +D   +RR
Sbjct: 60  GKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRR 117

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  +V        AI+ G+     A  + +    +  D      ++ L  ++G     G 
Sbjct: 118 GIASVVGARGIDMAILVGDLQFIQAIRVFA----RHVDTQADMALVRLVLDVGFSLCCG- 172

Query: 163 QMLDIQDEFIDETQ--------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
              +I +  +D  +         F +   KT  L   ACE GA ++ A++ E   L  +G
Sbjct: 173 ---EIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYG 229

Query: 215 ENLGIIFQLADDLLD 229
            +LGI FQ+ DD+ D
Sbjct: 230 RDLGIAFQIMDDVFD 244


>gi|291060049|gb|ADD72784.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 377

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 113/263 (42%), Gaps = 48/263 (18%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLL--QTASHMQTQ------HNDRLLSAIRYALL--GGK 51
           NG +   L +  + I+  L D L    T S M T+       + R+L  +  A +  GGK
Sbjct: 11  NGTMKRALAQRLRNIERALADALPAQPTRSWMGTRLRVLASEDTRVLRTVCNACVSCGGK 70

Query: 52  KIRSFLVTECASLFN-----------------VNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + R  L+   A L +                 ++      + A +E IH  SL+HDD+  
Sbjct: 71  RWRPLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLSAVVELIHTASLLHDDIE- 129

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTH 152
            D+   RRGKP  +++Y     + A + L  +A  +I   S +  LK  + S   +S T 
Sbjct: 130 -DHSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTLSIEPALKAALFSA-TISATR 187

Query: 153 NIGLQGMLGGQMLDI----QDEFI-DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            + +     GQ LDI      E I    Q   +  +KTGAL+  + E G + A  S  E 
Sbjct: 188 ALHM-----GQALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGELGFLCAGYSAREA 242

Query: 208 ERLRCFGEN---LGIIFQLADDL 227
              R FG     +GI FQ+ DD+
Sbjct: 243 ---RSFGAQVMPIGIGFQILDDV 262


>gi|219848508|ref|YP_002462941.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
 gi|219542767|gb|ACL24505.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
          Length = 343

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 12/185 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV    +    +   AL + A I+ +H +SLIHDD+   D+  +RRG+ T+  
Sbjct: 52  GKLIRPQLVLLACTAAGGDPQQALPLAAGIQLLHDFSLIHDDI--EDDSAMRRGRRTLWH 109

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIG--LQGMLGGQMLD 166
            +     I AG+ +   A   I     +L D  + ++ +L++       +  +  GQ LD
Sbjct: 110 IWGLAHGINAGDAMFVIAHLAIH----RLADVGVPAERVLAILRRFDEVILRICEGQYLD 165

Query: 167 IQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +    D  I       +   KT AL+  A E GA +A A +     L  FG  LG+ FQ+
Sbjct: 166 LSFEGDLSITPDDYLTMIGGKTAALIAGAAELGARVAGAPEATVTALAEFGRALGLGFQI 225

Query: 224 ADDLL 228
            DD+L
Sbjct: 226 EDDIL 230


>gi|291518883|emb|CBK74104.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
           16/4]
          Length = 306

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 8/161 (4%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+   +A+E +H  +L+HDD+  MD+   RRG  T+  +  + TA+I G+ LL  A   +
Sbjct: 65  AVIFASAVEILHLATLVHDDI--MDDADTRRGLITLQKKAGKRTAVICGDYLLAAAINEL 122

Query: 132 SSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           S   T   D    +   S    +I L  +   Q ++ ++  +   +   I   KT AL  
Sbjct: 123 SKVVT---DEKYKKFNFSRYVESIALGEL--RQNINNRNFRLKTFRYLSIIDGKTAALFE 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            A  +GA+   A + + +  R  G   GIIFQL DD +D E
Sbjct: 178 AAYHAGALAGDADEQQIKLFRKLGRYTGIIFQLTDDCIDFE 218


>gi|134279621|ref|ZP_01766333.1| IS element protein [Burkholderia pseudomallei 305]
 gi|167901285|ref|ZP_02488490.1| heptaprenyl diphosphate synthase component II [Burkholderia
           pseudomallei NCTC 13177]
 gi|254181827|ref|ZP_04888424.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
 gi|134248821|gb|EBA48903.1| IS element protein [Burkholderia pseudomallei 305]
 gi|184212365|gb|EDU09408.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
          Length = 363

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%)

Query: 50  GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GKKIR  L+   ASLF  +        + A+    ++E +H  +LIHDD+  +D   +RR
Sbjct: 60  GKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRR 117

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  +V        AI+ G+     A  + +    +  D      ++ L  ++G     G 
Sbjct: 118 GIASVVGARGIDMAILVGDLQFIQAIRVFA----RHVDTQADMALVRLVLDVGFSLCCG- 172

Query: 163 QMLDIQDEFIDETQ--------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
              +I +  +D  +         F +   KT  L   ACE GA ++ A++ E   L  +G
Sbjct: 173 ---EIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYG 229

Query: 215 ENLGIIFQLADDLLD 229
            +LGI FQ+ DD+ D
Sbjct: 230 RDLGIAFQIMDDVFD 244


>gi|50842220|ref|YP_055447.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes
           KPA171202]
 gi|282854286|ref|ZP_06263623.1| polyprenyl synthetase [Propionibacterium acnes J139]
 gi|50839822|gb|AAT82489.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes
           KPA171202]
 gi|282583739|gb|EFB89119.1| polyprenyl synthetase [Propionibacterium acnes J139]
 gi|314923275|gb|EFS87106.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1]
 gi|314966417|gb|EFT10516.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2]
 gi|314980998|gb|EFT25092.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3]
 gi|315091657|gb|EFT63633.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4]
 gi|315093037|gb|EFT65013.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1]
 gi|315103189|gb|EFT75165.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2]
 gi|315107050|gb|EFT79026.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1]
 gi|327327861|gb|EGE69637.1| putative polyprenyl synthetase [Propionibacterium acnes HL103PA1]
          Length = 365

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 44/223 (19%)

Query: 39  LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L A R    GGK++R    +     A+         L+  A++E +H  +L+HDDL  M
Sbjct: 43  VLDAARDYTAGGKRLRPAFCYWGHAAAADQPTEPAGLLQAAASLEFLHVSALVHDDL--M 100

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNG----------------LLTYAFEIISSPK---- 135
           D+   RRG P+VH  ++    I  G+G                LL ++ ++ +S      
Sbjct: 101 DHSDTRRGLPSVHRHFEAAHGIAHGDGPAEQFGFDIAILLGDLLLMWSSQMFTSAPVKAD 160

Query: 136 -----TQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
                T L D +R+++    +L +T   G+ G      LD+         V  + + K  
Sbjct: 161 RLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGSDSESALDL---------VGRVVEYKCA 211

Query: 187 ALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +      C+ G  +A  S   ++ +  FG  +G  FQ  DDLL
Sbjct: 212 SYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDLL 254


>gi|167892795|ref|ZP_02480197.1| heptaprenyl diphosphate synthase component II [Burkholderia
           pseudomallei 7894]
          Length = 363

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 25/195 (12%)

Query: 50  GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GKKIR  L+   ASLF  +        + A+    ++E +H  +LIHDD+  +D   +RR
Sbjct: 60  GKKIRPLLLLLAASLFRADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRR 117

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  +V        AI+ G+     A  + +    +  D      ++ L  ++G     G 
Sbjct: 118 GIASVVGARGIDMAILVGDLQFIQAIRVFA----RHVDTQADMALVRLVLDVGFSLCCG- 172

Query: 163 QMLDIQDEFIDETQ--------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
              +I +  +D  +         F +   KT  L   ACE GA ++ A++ E   L  +G
Sbjct: 173 ---EIDERSVDRRESIGFLRNHYFKVADRKTAVLFGLACEIGAALSGATKREIRALSQYG 229

Query: 215 ENLGIIFQLADDLLD 229
            +LGI FQ+ DD+ D
Sbjct: 230 RDLGIAFQIMDDVFD 244


>gi|146166126|ref|XP_001015938.2| Polyprenyl synthetase family protein [Tetrahymena thermophila]
 gi|146145326|gb|EAR95693.2| Polyprenyl synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 424

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 21/232 (9%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVG 76
           IL D LL T +        + +S   + LL  GGK+ R  L    A  FN+       + 
Sbjct: 98  ILSDNLLYTKNQNDLVSLTKAISEPVWDLLDRGGKRWRPILCIILAEAFNLGQEDVKEIA 157

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           +  E +H  +L+ DD+   DN  +RR K  VH+ Y    +I AGN +      I+     
Sbjct: 158 SLCEIVHNGTLVVDDIE--DNSTVRRDKKCVHLIYGVDISINAGNMMYFAPLHIL----- 210

Query: 137 QLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDI--------QDEFIDETQVFMIQKMKT 185
            LK N    + +L  +  +   +  +  GQ  DI        +     E Q   +   KT
Sbjct: 211 -LKSNKYTDQQKLRFAKIYAEEMTQLHLGQGWDILWHNTDKLEGRIPTEQQYLQMTAHKT 269

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           G L   +        + S  ++  +  F E +G+ FQ+ DD+L+ E +  KK
Sbjct: 270 GVLARLSSRLICAAVNTSVEDEMTISRFSERIGVAFQIQDDILNLEGEEYKK 321


>gi|308178200|ref|YP_003917606.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117]
 gi|307745663|emb|CBT76635.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117]
          Length = 365

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 20/201 (9%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++D L+ A    L+  GGK++R  LV   + L    +   ++  A +E  H  +L HDD+
Sbjct: 68  NSDPLIDASSRHLVEAGGKRVRPLLVLLTSLLGEGVNDDVIKAAAVVELTHLATLYHDDV 127

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQL-KDNIRSQLMLS 149
             MD+  +RRG PT H  +    AI+AG+ +   A  F     P+  + +     +L L 
Sbjct: 128 --MDSAPMRRGAPTAHEVWGNSVAILAGDLIFARASVFGSELGPEAVMWQSRTFERLCLG 185

Query: 150 LTH-NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
             H +IG +          + + + E  + +I   KT +L+  +   GA    AS+   +
Sbjct: 186 QLHESIGPR----------EGDDVIEHHIQVISD-KTASLLSTSGAFGARFGGASEF-ID 233

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            LR +GE +G+ FQ+ADD++D
Sbjct: 234 VLREYGEKVGVAFQVADDVID 254


>gi|146321614|ref|YP_001201325.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
 gi|145692420|gb|ABP92925.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
          Length = 235

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 9/212 (4%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSL 87
           S M   H       + Y    GK +R+ L    A +       + L   A +E +H  +L
Sbjct: 25  SEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKLYFAAHLEVLHLATL 84

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D    RRG    H Q+    AI  G+ LL Y+  +       L+    S+  
Sbjct: 85  IHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKGLRLLE---VSRDD 139

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQ 204
           L L ++  ++ +L G++  + ++F  + T    ++++  KT  L   AC+ G+ +   S+
Sbjct: 140 LDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQLGSFVPGQSR 199

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +       G+ LG+ FQL DDL+D + D+ +
Sbjct: 200 KDSSMAFRSGQALGMAFQLRDDLIDYQLDVAE 231


>gi|300934189|ref|ZP_07149445.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens
           DSM 45100]
          Length = 389

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 30/174 (17%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE----------------VTAIIAG 120
           +A E I   +LIHDD+  +D    RRG PTVH +++                   AI+ G
Sbjct: 114 SAFEFIQACALIHDDI--VDQSDTRRGHPTVHREFERHHRDRKWLGSSEHYGISQAILIG 171

Query: 121 NGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
           +  L +A +++  S   TQ     R       T       ++GGQ+LDI  E      V 
Sbjct: 172 DLALAWADDLLLDSGLSTQRLHQCRHAWRAMRTE------VIGGQILDIAVEASGTENVD 225

Query: 178 --FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             + + K KT +  +      GA +A AS+   E LR  GE++G+ FQL DD L
Sbjct: 226 HAWDVIKYKTASYTVARPLHVGAALAGASEELIEFLRTIGEDIGVAFQLRDDQL 279


>gi|315303877|ref|ZP_07874357.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii
           FSL F6-596]
 gi|313627753|gb|EFR96406.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii
           FSL F6-596]
          Length = 324

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 18/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L        +R    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 47  GGKRIRPMFVCLSARLSPNADFEMVRDASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDIAAHKMLSRVTVELST-----GEIEQL 155

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G I++  SQ + ++L  FG  +G+ FQ+ 
Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSQADYQKLYRFGYYVGMAFQIT 215

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    E++L K
Sbjct: 216 DDVLDFVGTEKELGK 230


>gi|307325750|ref|ZP_07604950.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306888538|gb|EFN19524.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 766

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 18/193 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G+  R ++      L   +      + A  E +H  +L+ DD+   DN   RRG+P+VH 
Sbjct: 454 GRSWRPYVAAAVLCLLGADPEPYRPLTAVTELLHVSALVIDDI--QDNSPTRRGRPSVHE 511

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AI AG  L  Y F+ +     Q  D   + L +   +   L+    GQ LD+  
Sbjct: 512 IFGTAPAITAGT-LGYYTFDALIQRVPQADDG--TMLRIYRLYLRDLRAAHAGQALDLAG 568

Query: 170 EF--IDET-----------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
                D+            Q+    ++KTG L+    E  AI+  A + + + +  + E 
Sbjct: 569 HHTAFDQAVATGDARPLLDQIRAAHRLKTGMLVRSTAEVSAILGGADETQLDAICAYFEA 628

Query: 217 LGIIFQLADDLLD 229
           +GI +Q+ DD+ D
Sbjct: 629 VGIAYQITDDVFD 641


>gi|38018123|gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera]
          Length = 321

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++I      A++AG+ LL+ A   ++S K    
Sbjct: 70  EMIHVASLLHDDV--LDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNT-- 125

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S L   + H +  + M   QM    ++ +           KT +L+  +C++ A++
Sbjct: 126 -EVVSLLATVVEHLVTGETM---QMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIALL 181

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  +         +G+NLG+ FQL DD LD
Sbjct: 182 AGQTAEVSMLAFEYGKNLGLAFQLIDDXLD 211


>gi|256372659|ref|YP_003110483.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009243|gb|ACU54810.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 338

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 19/204 (9%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLI 88
           T   D   +A+   + GGK++R  +          +        +R   A+E +H  SL 
Sbjct: 29  TTDPDITAAALHLIMAGGKRVRPLIALATALALGEVAPSPDDPVVRGAVAVELVHLASLY 88

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  MD    RRG  + + ++  + A++ G+ LL  A  I +    +L + + + L  
Sbjct: 89  HDDV--MDEASERRGVSSANARFGNLIAVVTGDFLLARAAGIAA----RLGEEVAAALAD 142

Query: 149 SLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQN 205
           +L        M  GQ+L++ D  +    T+ ++     KT +LM  A    AI+    Q 
Sbjct: 143 TLAA------MCEGQILEVADAHQLTRTTERYLATIAGKTASLMGTAARIPAIVLGRDQA 196

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
             + L   G  LG++FQL DD+LD
Sbjct: 197 MLDALSAAGTALGMLFQLRDDVLD 220


>gi|241957890|ref|XP_002421664.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis
           CD36]
 gi|223645009|emb|CAX39602.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis
           CD36]
          Length = 498

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 44/198 (22%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ LL  A      
Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256

Query: 128 ------FEIISS-------------PKTQLKDNIRSQL---------------MLSLTHN 153
                  E++S+               T L++N   ++               + +  H 
Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLR 211
             +Q   GG  +   +  ++    + + K  +KT +LM  +C + A+++ +  +  E   
Sbjct: 317 YSVQQKNGGDAVVDHNINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGSQDDIIENCY 376

Query: 212 CFGENLGIIFQLADDLLD 229
            FG NLG+ FQ+ DD+LD
Sbjct: 377 QFGRNLGLCFQIVDDMLD 394


>gi|94502254|ref|ZP_01308739.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833697|ref|YP_001597893.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS]
 gi|293977807|ref|YP_003543237.1| geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri
           DMIN]
 gi|94451192|gb|EAT14132.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206187|gb|ABS30497.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS]
 gi|292667738|gb|ADE35373.1| Geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri
           DMIN]
          Length = 326

 Score = 58.2 bits (139), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 30/195 (15%)

Query: 48  LGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           + GK IR    FL+T+     N++  T   +   IE IH  SLIHDD+    N   RRG 
Sbjct: 45  IKGKYIRPIFVFLITKMLG--NISKKTY-DLAILIELIHTASLIHDDVIDFSNT--RRGF 99

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQ 163
            +++  +   TA+I G+ + +       S    +K+N    L ++S T    ++ M  G+
Sbjct: 100 LSINAIWQNKTAVIFGDYIFS------KSLNIAIKNNYIDYLNLISKT----IEQMSEGE 149

Query: 164 MLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL----RCFGEN 216
           +L ++   + FI E    +I   KT  L+   CE  A     S N+K+++    + FGE 
Sbjct: 150 ILQMKYFNNFFIKEYIYNIIIFKKTAILISACCEGCA----KSLNKKKKIVLNIKKFGEL 205

Query: 217 LGIIFQLADDLLDCE 231
            G+ FQ+ DDLLD +
Sbjct: 206 AGMAFQIKDDLLDYK 220


>gi|120402007|ref|YP_951836.1| trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1]
 gi|119954825|gb|ABM11830.1| Trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1]
          Length = 329

 Score = 58.2 bits (139), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A L        + V GA IE +H  +L HDD+  MD   +RRG P+ 
Sbjct: 49  GGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+ L   A  ++S         I     L +T          GQM + 
Sbjct: 107 NARWSNNIAILAGDYLFATASRLVSRLGPDAVRIIADTFALLVT----------GQMRET 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   + +DE   ++ +   KT  L+  +   GA  + A   + ERL   G  +G  FQ++
Sbjct: 157 RGAADHVDEVDHYLKVVYEKTACLIAASGRFGATFSGADDEQIERLARLGGIVGTAFQIS 216

Query: 225 DD 226
           DD
Sbjct: 217 DD 218


>gi|303398760|emb|CBW46741.1| B318L [African swine fever virus Georgia 2007/1]
          Length = 318

 Score = 58.2 bits (139), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAI------EDGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H     +       A E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAAEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  ++ 
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPEKT 217

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I     F I  +    L   + E   ++  A+        CFG      FQLADD+ D +
Sbjct: 218 I---PFFKIAFIMGWVLGTGSVEDIGMIERAAH-------CFGH----AFQLADDIKDHD 263

Query: 232 ED 233
            D
Sbjct: 264 TD 265


>gi|290955089|ref|YP_003486271.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
 gi|260644615|emb|CBG67700.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
          Length = 345

 Score = 58.2 bits (139), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 18/193 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDD+  MD    RR +PTV 
Sbjct: 62  GGKGVRQALAVLGAEVVGAPARAGVPAAVAVELVHVFSLLHDDI--MDGDVERRRRPTVW 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             Y    A++AG+ L   A E +++ +        +  + +L+  +G   ++ GQ  D+ 
Sbjct: 120 KAYGTGPAVLAGDALFALAVETLATAEPG------ASALRTLSAALGE--LVRGQADDLL 171

Query: 168 -------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
                    E +   +   + + KTGAL+  A   GA++          L   G  LG+ 
Sbjct: 172 FAARPWAGPERVRPAEYRAMAERKTGALLGCAAALGALLGGGPPAAVAALDRAGRRLGLA 231

Query: 221 FQLADDLLDCEED 233
           FQ+ DD+L    D
Sbjct: 232 FQIVDDVLGIWGD 244


>gi|253752432|ref|YP_003025573.1| polyprenyl synthetase [Streptococcus suis SC84]
 gi|253754258|ref|YP_003027399.1| polyprenyl synthetase [Streptococcus suis P1/7]
 gi|253756192|ref|YP_003029332.1| polyprenyl synthetase [Streptococcus suis BM407]
 gi|251816721|emb|CAZ52363.1| polyprenyl synthetase [Streptococcus suis SC84]
 gi|251818656|emb|CAZ56491.1| polyprenyl synthetase [Streptococcus suis BM407]
 gi|251820504|emb|CAR47259.1| polyprenyl synthetase [Streptococcus suis P1/7]
 gi|292559037|gb|ADE32038.1| Polyprenyl synthetase [Streptococcus suis GZ1]
 gi|319758838|gb|ADV70780.1| polyprenyl synthetase [Streptococcus suis JS14]
          Length = 329

 Score = 58.2 bits (139), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 9/212 (4%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSL 87
           S M   H       + Y    GK +R+ L    A +       + L   A +E +H  +L
Sbjct: 25  SEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKLYFAAHLEVLHLATL 84

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D    RRG    H Q+    AI  G+ LL Y+  +       L+    S+  
Sbjct: 85  IHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLFGKGLRLLE---VSRDD 139

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGALMCFACESGAIMAHASQ 204
           L L ++  ++ +L G++  + ++F  + T    ++++  KT  L   AC+ G+ +   S+
Sbjct: 140 LDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFGLACQLGSFVPGQSR 199

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +       G+ LG+ FQL DDL+D + D+ +
Sbjct: 200 KDSSMAFRSGQALGMAFQLRDDLIDYQLDVAE 231


>gi|308177142|ref|YP_003916548.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
 gi|307744605|emb|CBT75577.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
          Length = 369

 Score = 58.2 bits (139), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 26/243 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P++ Q+ S R++ I   +  Q  S   +     L S I  +L  GK +R  LV      F
Sbjct: 28  PTR-QKISDRLEEIA--IQAQRRSAAYSAQTALLWSRISKSLATGKLMRPSLVMLGYRAF 84

Query: 66  NV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-DEVTA------- 116
              N   A+ +G A E +H   LIHDD+  +D  ++RRGK T+   Y D+ +A       
Sbjct: 85  GGGNEARAIDLGCAFELLHAALLIHDDV--VDRDFMRRGKATISALYRDQASASGRSLAD 142

Query: 117 ---------IIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLD 166
                    IIAG+ L++ A ++ +             Q         G  G L   +  
Sbjct: 143 AEHAGNSVGIIAGDLLISEAIKLAARAAAGSDSEAGVEQAFFEAIEQAG-AGELEDLLYS 201

Query: 167 IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +       +QV  +++MKT A       ++GA++A A   + E +   G  LG+ +Q+ D
Sbjct: 202 LGSAAATTSQVLRMEQMKTAAYSFQLPLQAGALLAGAHPGQAEAIGAVGCQLGVAYQIID 261

Query: 226 DLL 228
           D+L
Sbjct: 262 DVL 264


>gi|298529963|ref|ZP_07017365.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509337|gb|EFI33241.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 322

 Score = 58.2 bits (139), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 10/188 (5%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GGK++R  L    A            +  ++E +H  +LIHDD+  +D+   RRG+  
Sbjct: 39  LSGGKRLRPMLTILTARCLGYQDQDIYPLACSLEFLHSATLIHDDI--LDSADTRRGQTA 96

Query: 107 VHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            H+ +    T +     L      +       +   +   +M + T  +        ++ 
Sbjct: 97  CHLAFGLHRTVLAGDALLALANLIVARYDIPAMNYCVAQAIMRTATGEVE-------EIA 149

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            I+    D T    I + KT  L+  AC  GA++A A Q   +    FG N+G+ FQL D
Sbjct: 150 QIRSPRPDRTAYLEIIQGKTADLIRAACSCGAMLARADQERLDHADSFGFNVGMAFQLVD 209

Query: 226 DLLDCEED 233
           D LD   D
Sbjct: 210 DALDYAAD 217


>gi|225351338|ref|ZP_03742361.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157682|gb|EEG70965.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 364

 Score = 58.2 bits (139), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 36/209 (17%)

Query: 49  GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++RS L  +    F    +        L +  A+E     +L+HDD+  +D+  +RR
Sbjct: 51  GGKRLRSLLTLDSFRAFASEDVRERDFDALLDLACAVEVFQTGALVHDDI--IDDSDLRR 108

Query: 103 GKPTVHIQYDEVTAIIA-GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML- 160
           GKP+ H  +   T   A G+GL     +++++    + D   S+L    TH   +   L 
Sbjct: 109 GKPSAHRAFSTGTHSEAIGHGLGIMLGDMLATASVDIADKAASKL----THGSDVVAALL 164

Query: 161 -------GGQMLDIQ---------DEFIDET-QVFMIQKMKTGALMCFA-CESGAIMAHA 202
                   GQ+LD+          DE ++ +  VF   + KT +    A  E G + A  
Sbjct: 165 NMHREVEVGQVLDLAVELNPLDDPDELVEASLNVF---RWKTASYTTIAPLEFGMLAAGI 221

Query: 203 SQNE-KERLRCFGENLGIIFQLADDLLDC 230
            +++ +++    G  LG+ FQLADDLLD 
Sbjct: 222 GKDDARKQALAVGLPLGLAFQLADDLLDV 250


>gi|30468171|ref|NP_849058.1| prenyl transferase [Cyanidioschyzon merolae strain 10D]
 gi|30409271|dbj|BAC76220.1| prenyl transferase [Cyanidioschyzon merolae strain 10D]
          Length = 315

 Score = 58.2 bits (139), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 22/196 (11%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR +F++    +L  ++  +  R+    E IH  SL+HDD+  +D    RRG  TV
Sbjct: 37  GGKRIRPTFVLLVSQALGGISQ-SQQRLAEITEMIHTASLLHDDV--VDEASKRRGIDTV 93

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    A++AG+ L   +   +++          S+L+  L           G+M   
Sbjct: 94  NTRFSNRIAVLAGDFLFAQSSWYLANLNNLEVVKFISKLISDLAE---------GEMRQT 144

Query: 168 QDEFIDETQVF-MIQK--MKTGALMCFACESGAIMA----HASQNEKERLRCFGENLGII 220
             +F  + +++  ++K   KT +L  FAC + A       H   +  + +   G++LGI 
Sbjct: 145 STQFSTQFELWAYLEKSFYKTASL--FACSAKATCMLSNDHEDNHHHKNMYLLGQHLGIA 202

Query: 221 FQLADDLLDCEEDLPK 236
           FQ+ DD+LD   D+ +
Sbjct: 203 FQIMDDVLDISGDISQ 218


>gi|302024379|ref|ZP_07249590.1| polyprenyl synthetase [Streptococcus suis 05HAS68]
          Length = 235

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 8/169 (4%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           + L   A +E +H  +LIHDD+  +D    RRG    H Q+    AI  G+ LL Y+  +
Sbjct: 68  SKLYFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRL 125

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGA 187
                  L+    S+  L L ++  ++ +L G++  + ++F  + T    ++++  KT  
Sbjct: 126 FGKGLRLLE---VSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAF 182

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L   AC+ G+ +   S+ +       G+ LG+ FQL DDL+D + D+ +
Sbjct: 183 LFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAE 231


>gi|315271298|gb|ACO46812.2| putative octaprenyl-diphosphate synthase [Deinococcus deserti
           VCD115]
          Length = 324

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 18/189 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK+ R  +    A    V   ++     + +G  +E +H  SL+HDDL  +D+   RRG
Sbjct: 40  GGKRTRPMITLLAAQALGVGPGSSQWPEVIDLGVCVELLHSASLLHDDL--IDDADTRRG 97

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +     ++  V ++++G+ +L     +++         + S   L+         +  G+
Sbjct: 98  QQAAFRRFGNVVSVMSGDFMLARLLTLLA--------GMPSGTALTRAFGETASQICEGE 149

Query: 164 MLDIQ-DEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +L  Q   + D        I   KT AL   A  + A++  +S+ ++E L  FG   G+ 
Sbjct: 150 VLQFQVAAYADYGLEHYLNIIHGKTAALTELAACAPAMLLGSSEAQREALATFGREYGLA 209

Query: 221 FQLADDLLD 229
           FQ+ DDLLD
Sbjct: 210 FQMQDDLLD 218


>gi|218294793|ref|ZP_03495647.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
 gi|218244701|gb|EED11225.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
          Length = 315

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 36/235 (15%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P  L+      +  L +L+      ++  H D L++A      GGK+IR  LV       
Sbjct: 4   PLPLEAKLAAFEEALSELVRSEVLFVRLIHQD-LVTA------GGKRIRPRLV------- 49

Query: 66  NVNHLTALRVGAA---------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               L +  VG A         +E +H  +L+HDDL  +D   +RRGK   + +Y    +
Sbjct: 50  ---FLASGAVGGAPFELELALAVELLHSATLLHDDL--IDEAELRRGKEAAYRRYGNAVS 104

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDET 175
           +++G+ LL+    +++  KT   + + +    + T  +  +G +L  Q+  ++D  ++  
Sbjct: 105 VLSGDFLLSRLLHVVA--KTGSLELVEA---FAETARVLAEGEVLQFQVAALEDYSLENY 159

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   I   KT ALM  A E  A++       +E LR FG   G  FQ+ DD LD 
Sbjct: 160 E--RIITAKTAALMALATEGPALLKGLKGAWREALRRFGLLYGQAFQMRDDYLDL 212


>gi|332797814|ref|YP_004459314.1| polyprenyl synthetase [Acidianus hospitalis W1]
 gi|332695549|gb|AEE95016.1| polyprenyl synthetase [Acidianus hospitalis W1]
          Length = 282

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 25/232 (10%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L E  +R   I+D L+ +    ++      ++   +Y +  GK+ R  LV          
Sbjct: 3   LIEFWERSKVIIDSLVTKFVDDVKDWE---IMEMSKYIMKDGKRFRGTLVFLFNDALGGE 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A +   A E +H  SL  DD+  +D    RRG  +    Y     I   N L+  A 
Sbjct: 60  EKNAYQGALATEILHSASLALDDI--VDYDLTRRGMASAWAVYTNRRVIFVSNFLIPTAL 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +IISS   +               NI ++      +  ++D + D+ + F   ++KT +L
Sbjct: 118 KIISSYGKE-------------ALNISIELWKDTAIGALKDMYGDKREYFKTIELKTASL 164

Query: 189 MCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLPKK 237
                   A++A  S  +KE   +L   G  LG+I+QL DD +DC +  P+K
Sbjct: 165 FKLP----AMLASFSSGKKELVDKLLEAGRVLGVIYQLIDDYVDCVKLEPEK 212


>gi|308233677|ref|ZP_07664414.1| Polyprenyl synthetase [Atopobium vaginae DSM 15829]
 gi|328943611|ref|ZP_08241076.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829]
 gi|327491580|gb|EGF23354.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829]
          Length = 366

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 13/173 (7%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T L++  A E     +LIHDD+   D   +RRGKP ++  +    A   G+  L +A E 
Sbjct: 97  TLLQISCAFEHFQAAALIHDDIA--DESLLRRGKPCLYRVHGTGLATNMGDSALVHALEC 154

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQMLDI--QDEFIDETQVFMIQKMKTGA 187
           I+S  + + D +R +L+      I ++   + GQ LD+   +E   +  +     M T  
Sbjct: 155 INS-LSGISDELRVRLIQEF---ITMEKHTIEGQALDVGWSNENRWDISLDDYLYMATSK 210

Query: 188 LMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              ++  +    GA+ A ASQ   E LR +G   G+ FQL DD L+   D  K
Sbjct: 211 TAYYSASTPLVIGALFAGASQKRSEALRAYGLQAGLAFQLKDDELNLFGDANK 263


>gi|226356826|ref|YP_002786566.1| octaprenyl-diphosphate synthase [Deinococcus deserti VCD115]
          Length = 318

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 18/189 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK+ R  +    A    V   ++     + +G  +E +H  SL+HDDL  +D+   RRG
Sbjct: 34  GGKRTRPMITLLAAQALGVGPGSSQWPEVIDLGVCVELLHSASLLHDDL--IDDADTRRG 91

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +     ++  V ++++G+ +L     +++         + S   L+         +  G+
Sbjct: 92  QQAAFRRFGNVVSVMSGDFMLARLLTLLA--------GMPSGTALTRAFGETASQICEGE 143

Query: 164 MLDIQ-DEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           +L  Q   + D        I   KT AL   A  + A++  +S+ ++E L  FG   G+ 
Sbjct: 144 VLQFQVAAYADYGLEHYLNIIHGKTAALTELAACAPAMLLGSSEAQREALATFGREYGLA 203

Query: 221 FQLADDLLD 229
           FQ+ DDLLD
Sbjct: 204 FQMQDDLLD 212


>gi|294654995|ref|XP_457083.2| DEHA2B02640p [Debaryomyces hansenii CBS767]
 gi|199429612|emb|CAG85071.2| DEHA2B02640p [Debaryomyces hansenii]
          Length = 483

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 40/194 (20%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ LL  A      
Sbjct: 188 RLAEIVEMIHTASLLHDDV--IDLSDTRRGRPSGNIAFSNKMAVLAGDFLLGRASVAIAR 245

Query: 128 ------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-----------GQMLDIQDE 170
                  E++S+    L +    QL  ++  N G   +             G++  ++ E
Sbjct: 246 LRNPEVIELLSTTIANLVEGEFMQLKNTVMSNEGPDSITNDGDIKNIPKATGKVPTVEHE 305

Query: 171 F-------ID-ETQV-----FMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           +       +D  T V     + + K  +KT +LM  +  +  +++ +  N  E    FG 
Sbjct: 306 YSVTAPGEVDHNTNVSAAFEYYLHKTYLKTASLMSKSSRAAGVLSGSQDNIIENCYDFGR 365

Query: 216 NLGIIFQLADDLLD 229
           NLG+ FQ+ DD+LD
Sbjct: 366 NLGLCFQIVDDMLD 379


>gi|42527045|ref|NP_972143.1| polyprenyl synthetase family protein [Treponema denticola ATCC
           35405]
 gi|41817469|gb|AAS12054.1| polyprenyl synthetase family protein [Treponema denticola ATCC
           35405]
          Length = 350

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  L      L   +   A  +   IE  H  SL+HDD+   D    RRG P  H
Sbjct: 64  GGKRWRPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIE--DKSDTRRGAPAAH 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
           I+Y   TA+ + + L   A   + +   ++ +++R+ +    + N  L+ +  GQ +DI 
Sbjct: 122 IKYGLDTALNSASWLYFEALNPLIN--YEVSESVRAVIYSLYSQN--LRRLHLGQSMDIG 177

Query: 168 ----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                D      +   +  +KTG+L   A E G I A    NE         ++GI FQ+
Sbjct: 178 WHSNSDIIPSVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMGIGFQI 237

Query: 224 ADDLLDCEE 232
            DD+ +  E
Sbjct: 238 LDDVKNITE 246


>gi|270158512|ref|ZP_06187169.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968]
 gi|289166652|ref|YP_003456790.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150]
 gi|269990537|gb|EEZ96791.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968]
 gi|288859825|emb|CBJ13806.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae
           NSW150]
          Length = 322

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +          + + A IE  H  +L+HDD+  +D+  +RRG+ T +
Sbjct: 43  GGKRLRCLLVLLASRACGYEGKEHIMLAAMIEFFHTATLLHDDV--IDDSTLRRGRDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG---LQGMLGGQML 165
             +    +I+ G+ L T   E++     ++ D    QL++ +   +G   +Q        
Sbjct: 101 KIWGNKASILVGDYLFTKYLELM----VEVGDIDIIQLLIGIAPQMGCGEIQQFSNRHNA 156

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D+  E     + F + + KT  L   +   GA+++ +    ++ +  +G +LG  FQL D
Sbjct: 157 DLSVE-----EYFDMIRAKTALLFAASSAIGALISKSEHQIQKAMYSYGLHLGNAFQLID 211

Query: 226 DLLD 229
           D LD
Sbjct: 212 DALD 215


>gi|223933610|ref|ZP_03625590.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
 gi|330833373|ref|YP_004402198.1| polyprenyl synthetase [Streptococcus suis ST3]
 gi|223897736|gb|EEF64117.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
 gi|329307596|gb|AEB82012.1| Polyprenyl synthetase [Streptococcus suis ST3]
          Length = 329

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 8/169 (4%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           + L   A +E +H  +LIHDD+  +D    RRG    H Q+    AI  G+ LL Y+  +
Sbjct: 68  SKLYFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRL 125

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKM--KTGA 187
                  L+    S+  L L ++  ++ +L G++  + ++F  + T    ++++  KT  
Sbjct: 126 FGKGLRLLE---VSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAF 182

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L   AC+ G+ +   S+ +       G+ LG+ FQL DDL+D + D+ +
Sbjct: 183 LFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVAE 231


>gi|298245028|ref|ZP_06968834.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552509|gb|EFH86374.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 367

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 8/154 (5%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-FEIISSPKTQ 137
           +E  H ++LIHDD+  +D    RR +PT+   +     I +G+G+   +   +       
Sbjct: 101 VELTHNFTLIHDDI--VDGDTERRHRPTLWTVWGMPNGINSGDGMFALSRLALWGVLDEG 158

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACE 194
           ++ +I ++L   L     +  +  GQ LD+  E   +  V M   M   KT  LM  + E
Sbjct: 159 VEADIAARLGACLDKACLV--VAEGQYLDMSFEGRQDISVAMYIDMIRRKTAELMACSAE 216

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +         RLR FGE +GI FQ+ DDLL
Sbjct: 217 MGARLGTRDAEAIARLRSFGEAIGIAFQVRDDLL 250


>gi|297562507|ref|YP_003681481.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846955|gb|ADH68975.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 380

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 37/216 (17%)

Query: 41  SAIRYALLGGKKIRSFL-----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + +R+ L GGK++R  L     +    +        A +  AA+E +   +L+HDD+  M
Sbjct: 61  TTVRFTLGGGKRMRPLLAWWGWLAGGGAPSGETARAARQACAAVELVQTCALVHDDV--M 118

Query: 96  DNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           D    RRG+P+VH                 +Y E  A++ G+  L +A ++++     + 
Sbjct: 119 DGSPTRRGRPSVHAAHALEHERDGHVGDSRRYGEALAVLVGDLALVWADDMLNEALPGVP 178

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACES- 195
           + +R++   ++  ++  + ++ GQ LD++ +      E     +  +KT     ++ E  
Sbjct: 179 EPVRAR---AVWRDLRTE-IMAGQFLDVRAQARRERSEEAALRVDLLKT---ASYSVERP 231

Query: 196 ---GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              GA MA A       LR +G ++GI FQL DDLL
Sbjct: 232 LHLGAAMAGADPAAVGALRGYGRDVGIAFQLRDDLL 267


>gi|269794596|ref|YP_003314051.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
 gi|269096781|gb|ACZ21217.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
          Length = 361

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 39/241 (16%)

Query: 16  IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECAS-LFNVNHLTA 72
           +D++LDD   +         +D  +L ++++ A  GGK++R  L+T     L   +   A
Sbjct: 22  VDSVLDDFFAEAIDRSDAYGSDYTQLWTSLQSASQGGKRLRPLLLTGVYDQLGGTDTALA 81

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------DE-------VT 115
             +GAA+E +H   ++HDD+  +D+  +RRG+  V   +          DE         
Sbjct: 82  ATIGAAVELLHTAFVVHDDV--IDHDVVRRGRLNVSGTFAQRARAEGADDERAENLGAAA 139

Query: 116 AIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF- 171
            I+AG+  LT A  +++   +P +  +D     L+    H + +     G++ D++    
Sbjct: 140 GILAGDLALTGAHRLVAFSDAPASTRRD-----LVHLFDHAVYVTA--AGELSDVRYSLD 192

Query: 172 ---IDETQVFMIQKMKTGALMCF--ACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              +    +  +   KT A+  F    ++GA++A A     E L   G  +G  FQL DD
Sbjct: 193 LAPVGLADIVAMAAHKT-AVYSFELPLQAGAVLAGADPRTVEWLSHVGRLVGTAFQLLDD 251

Query: 227 L 227
           +
Sbjct: 252 I 252


>gi|323699172|ref|ZP_08111084.1| Polyprenyl synthetase [Desulfovibrio sp. ND132]
 gi|323459104|gb|EGB14969.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
          Length = 322

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 18/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR       A          L +  A+E +H  +L+HDD   +D+  +RRG+   H
Sbjct: 41  GGKRIRPLFTLLFARALGYAKDDYLAIACALELLHSATLLHDDY--LDDAELRRGRAASH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +     I+AG+ LL  A E+ +        N R   +L+     G+     G++ +I 
Sbjct: 99  LVFGRTETILAGDALLALANEMGAR-----YGNPRLSWLLA----KGIMETATGEIEEI- 148

Query: 169 DEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            EF     ++      I   KT  L+  AC  GA +A A+  +++    FG N+GI FQL
Sbjct: 149 -EFSRAPSLNRETYMRIIVGKTARLIECACRCGAALAGATPEQEDAAGEFGLNVGIAFQL 207

Query: 224 ADDLLD 229
            DD LD
Sbjct: 208 VDDALD 213


>gi|257056769|ref|YP_003134601.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
 gi|256586641|gb|ACU97774.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
          Length = 361

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 34/180 (18%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTA 116
           LR  A++E I   +LIHDD+  +D+   RRG PTVH+ +                 +  A
Sbjct: 77  LRAVASLELIQACALIHDDV--IDSSDSRRGSPTVHVAFAARHTRERWLGSAEAFGQAAA 134

Query: 117 IIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           ++ G+  L +A ++ +     P T        + M +         +L GQ LD+  +  
Sbjct: 135 VLIGDLALAWAEDMFAECGLPPATIAAARPAWRAMRT--------EVLAGQYLDVHTQAT 186

Query: 173 DETQV---FMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +T V     + ++KT A         GA +A A     + L  FG  LG+ FQL DDLL
Sbjct: 187 GDTSVEAALRVDRLKTAAYTVQRPLHLGAALAGADDELIDALLDFGGELGVAFQLRDDLL 246


>gi|256395056|ref|YP_003116620.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256361282|gb|ACU74779.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 340

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 18/149 (12%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H ++L+HDD+  +D    RR +PT    +    AI+AG+ +L  A  ++           
Sbjct: 95  HNFTLLHDDV--IDRDQTRRHRPTAWTVFGAENAILAGDAMLALALRLVGGEAA------ 146

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIM 199
            S+L   +        +  GQ  D   E  D+    +   +   KTGAL+  AC  G + 
Sbjct: 147 -SRLAECVIE------ICDGQYEDCAFELRDDVTLDECLAMAGKKTGALLGCACALGGLA 199

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228
             A       L  FG  LG+ FQL DDLL
Sbjct: 200 VRADPLTVAALDLFGRELGMAFQLTDDLL 228


>gi|256392496|ref|YP_003114060.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256358722|gb|ACU72219.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 347

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRS-FLVTECASLFNVNH 69
           RIDT L   + +    ++    D LL+ +    R A+  GK+IR+ F      +    + 
Sbjct: 10  RIDTELRAFVREETGLLEA--VDPLLAPVGAQLRAAVADGKRIRAAFCYWGWRAAGQGDT 67

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-------------A 116
              +R  AA+E +H  +L+HDDL  +D+  +RRG PT H+   E T             A
Sbjct: 68  PAMVRAAAAMELVHAAALVHDDL--IDDSLLRRGVPTPHVALREATAKAPDPDGAARSLA 125

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDE 174
           ++ G+ L+ +A ++ +          R++ M S+      + ++ G+ L++       D 
Sbjct: 126 LLVGDLLMAWAGQLFTGSGLPAVYLARARPMWSVLA----RELIAGECLEVLRTGTETDP 181

Query: 175 TQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +   I + KT         + G  +  AS         +G  LG  FQL DDLL
Sbjct: 182 QESLTIIRYKTAKYTVEHPLQIGGRLGGASARTLGVFSDYGLPLGEAFQLRDDLL 236


>gi|37912978|gb|AAR05310.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine
           gamma proteobacterium EB000-45B06]
 gi|40063209|gb|AAR38046.1| polyprenyl synthetase family protein [uncultured marine bacterium
           562]
          Length = 316

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 94/180 (52%), Gaps = 8/180 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L    +S         L++ A IE +H  +L+HDD+  +D    RRG  +V+ 
Sbjct: 40  GKQLRARLSLIASSADRRQGKKRLKLAAIIELLHNATLVHDDV--VDESPTRRGVKSVNN 97

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +     ++ G+ + + AF ++     +L ++   + + + T++I    ++  Q+  I +
Sbjct: 98  IWTNAHGVLIGDYIYSKAFMLM----VELGNSKILEELSNATNDISKGELI--QLDAIAN 151

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I  +++  I   KTG L   + + GA++ ++ ++    +    +NLGI+FQ+ DDLLD
Sbjct: 152 TGISLSELEDISYFKTGRLFEASAKCGALLCNSKKSYVNSISECAKNLGIVFQIKDDLLD 211


>gi|145223562|ref|YP_001134240.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315443909|ref|YP_004076788.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
 gi|145216048|gb|ABP45452.1| geranylgeranyl-diphosphate synthase [Mycobacterium gilvum PYR-GCK]
 gi|315262212|gb|ADT98953.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
          Length = 359

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 36/215 (16%)

Query: 45  YALLGGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           + L GGK++R           A      H+  +R+ +A+E +H  +L+HDDL  +D    
Sbjct: 47  FVLRGGKRLRPAFAYWGFRAVAGTEPEPHI--MRLFSALELLHACALVHDDL--IDASAT 102

Query: 101 RRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           RRG PTVH  + E                  AI+ G+  L +A +II+        + R 
Sbjct: 103 RRGLPTVHRIFSERHRSNNWLGSSDQFGLSAAILLGDLSLVWADDIIAEAPIDDAAHRRV 162

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAH 201
           Q + +         +LGGQ LDI +E      V     +   KT +          + A 
Sbjct: 163 QRVWAAIRT----EVLGGQYLDIVNEASGSETVASALTVNIYKTASYTI--SRPLQLGAA 216

Query: 202 ASQNEKERLRCF---GENLGIIFQLADDLLDCEED 233
           A+ +  E L  F   G +LG+ FQL DD+L    D
Sbjct: 217 AAGDRPEILEAFHELGTSLGVAFQLRDDVLGVYGD 251


>gi|302348187|ref|YP_003815825.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus
           saccharovorans 345-15]
 gi|302328599|gb|ADL18794.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus
           saccharovorans 345-15]
          Length = 310

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 16/187 (8%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y + GGK  R F+    A     N   A     A+E +   SL  DD+  +D    RRG 
Sbjct: 46  YIVKGGKMFRGFMTMLFAEAAGGNLDRAKDAAIAVELVQGASLALDDI--IDKDAERRGG 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-GLQGMLGGQ 163
           P+  + Y    + +A   L+  A +++                L+L+++I   + M+ G+
Sbjct: 104 PSAWVLYGIGKSAMASLLLVPTALKLVEQYGP-----------LALSYSITAWESMVRGE 152

Query: 164 MLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           ++D      ++  +   +  +KTG+L   A   G I A+  +   ER   +G  +G  +Q
Sbjct: 153 IMDAYSSLNLEPVEYLQLASLKTGSLFSLASTLGVIAAN-HEEYAERAWNYGNIVGTAYQ 211

Query: 223 LADDLLD 229
           LADD+ D
Sbjct: 212 LADDITD 218


>gi|86740094|ref|YP_480494.1| polyprenyl synthetase [Frankia sp. CcI3]
 gi|86566956|gb|ABD10765.1| Polyprenyl synthetase [Frankia sp. CcI3]
          Length = 634

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 30/176 (17%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAG 120
           AAIE +H  +LIHDD+  MD    RRG+P  H ++  V                 AI+ G
Sbjct: 320 AAIELLHACALIHDDV--MDASDTRRGRPAAHRRFSRVHRTAGWRGDPADFGRSAAILLG 377

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEF-----ID 173
           +  L +A E++++ +   +  +R+        +     ++ GQ LD+  Q E      +D
Sbjct: 378 DLFLAWADELLAASRMPPEALVRAWPTYGRMRSE----LMAGQYLDLVGQAEAGPHGGLD 433

Query: 174 ETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             +   I + KT G  +    + G ++A A  +       FG  LG  FQL DDLL
Sbjct: 434 PGRAVRIARYKTAGYTVVRPLQLGGLLAGAPPDLLAAYAAFGLPLGEAFQLRDDLL 489


>gi|15920702|ref|NP_376371.1| isoprenyl diphosphate synthase [Sulfolobus tokodaii str. 7]
 gi|15621485|dbj|BAB65480.1| 283aa long hypothetical isoprenyl diphosphate synthase [Sulfolobus
           tokodaii str. 7]
          Length = 283

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 29/229 (12%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR---SFLVTEC 61
           L S  +++ + ID ++DD L+            +LL   +Y L  GK+ R   +FL TE 
Sbjct: 3   LLSYWKKSKEIIDKLVDDYLVDIKDW-------QLLEVSKYILKDGKRFRGTLTFLFTEA 55

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               N +   A +   A E +H  SL  DD+  +D   IRRG  +    Y     I   N
Sbjct: 56  ---LNGDIKNAYKAALASEILHSASLALDDI--VDYDIIRRGGSSAWAIYTNRKVIFITN 110

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L+  A  IIS   T  ++ ++  + L     +G           ++D F   ++     
Sbjct: 111 YLIPSALNIIS---TYGEEALKISIQLWKDTAVGA----------LKDIFGSPSEYLSTI 157

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           ++KT +L   +    +  +H     +E L   G+ +GI +QL DD +DC
Sbjct: 158 ELKTSSLFKLSTMLASFASHREDLVEETLDI-GKYIGIAYQLVDDYIDC 205


>gi|220910193|ref|YP_002485504.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425]
 gi|219866804|gb|ACL47143.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425]
          Length = 323

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK+IR  +V   A   + +   +    R+    E IH  SL HDD+  +D   +RRG PT
Sbjct: 45  GKRIRPAIVLLLARAISPSQEISSRHRRLAEITEMIHTASLFHDDV--VDQSDLRRGLPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           VH  +    AI AG+ L   A   ++         + SQ++         QG        
Sbjct: 103 VHSLFGNRIAIQAGDFLFAQASWYLADLDNLTVVKLLSQVIKDFAEGEIQQGFNRFDTSL 162

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
               ++D+T        KT +L+  + ++  +++  S    + L  +G ++G+ FQ+ DD
Sbjct: 163 TMAAYLDKTY------YKTASLIANSSKAVGVLSGISAQSSQSLYEYGRHVGLAFQIVDD 216

Query: 227 LLD 229
           +LD
Sbjct: 217 ILD 219


>gi|255030470|ref|ZP_05302421.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes LO28]
          Length = 292

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 18/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 32  GGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 89

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 90  KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 140

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 141 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 200

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    E++L K
Sbjct: 201 DDVLDFVGTEKELGK 215


>gi|108862467|gb|ABA97399.2| Prenyl transferase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|222630738|gb|EEE62870.1| hypothetical protein OsJ_17673 [Oryza sativa Japonica Group]
          Length = 245

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 14/151 (9%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +   +   ++        N
Sbjct: 2   IHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLA--------N 51

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198
           + +  ++ L   + ++    G++      F   I      +    KT +L+  +  S AI
Sbjct: 52  LENIEVIKLISQV-IKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAI 110

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +  S    E++  +G NLG+ FQ+ DD+LD
Sbjct: 111 FSGVSTAICEQMYEYGRNLGLSFQVVDDILD 141


>gi|16803969|ref|NP_465454.1| hypothetical protein lmo1930 [Listeria monocytogenes EGD-e]
 gi|224501271|ref|ZP_03669578.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes FSL R2-561]
 gi|254827185|ref|ZP_05231872.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           N3-165]
 gi|254831469|ref|ZP_05236124.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes 10403S]
 gi|254899373|ref|ZP_05259297.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes J0161]
 gi|254912488|ref|ZP_05262500.1| heptaprenyl diphosphate syntase component II [Listeria
           monocytogenes J2818]
 gi|254936815|ref|ZP_05268512.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900]
 gi|255025694|ref|ZP_05297680.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes FSL J2-003]
 gi|16411383|emb|CAD00008.1| lmo1930 [Listeria monocytogenes EGD-e]
 gi|258599568|gb|EEW12893.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           N3-165]
 gi|258609410|gb|EEW22018.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900]
 gi|293590470|gb|EFF98804.1| heptaprenyl diphosphate syntase component II [Listeria
           monocytogenes J2818]
          Length = 321

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|183601372|ref|ZP_02962742.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219683427|ref|YP_002469810.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|241191129|ref|YP_002968523.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241196535|ref|YP_002970090.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|183218978|gb|EDT89619.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219621077|gb|ACL29234.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|240249521|gb|ACS46461.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240251089|gb|ACS48028.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|295794118|gb|ADG33653.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 366

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 35/210 (16%)

Query: 49  GGKKIRSFLVTEC----ASLFNVNHLTALRV-----GAAIECIHCYSLIHDDLPSMDNGY 99
           GGK++R+ L  +     A   +     ++R        AIE     +L+HDDL  +D+  
Sbjct: 52  GGKRLRALLTLDAYDVLAGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDL--IDDSD 109

Query: 100 IRRGKPTVHIQYDEVTA---------IIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLS 149
           +RRGKP+ H                 ++ G+ L T    I+    T + ++ R  +  LS
Sbjct: 110 LRRGKPSAHCALTSFAGARSIGRGLGLMLGDMLATACTLIMEDASTGMVEHRRLVEAFLS 169

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHA 202
           + H++ +     GQ+LD+  E   +D+ Q        + + KT +    A    A +A  
Sbjct: 170 MQHDVEV-----GQVLDLAIERMPLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASG 224

Query: 203 SQNEKERLRC--FGENLGIIFQLADDLLDC 230
             +E   L C   G  LG  FQLADDLLD 
Sbjct: 225 MTSEAANLHCHAIGLPLGQAFQLADDLLDV 254


>gi|325182786|emb|CCA17241.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 452

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 27/202 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT-----------------ALRVGAAIECIHCYSLIHDD 91
           GGKK+R  +V   +    VN L+                   R+    E IH  SL+HDD
Sbjct: 159 GGKKVRPTMVLLMSQAAEVNRLSNELPLPSSQSKEFTMAAQQRLAEITEMIHTASLLHDD 218

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D   +RRG  +V+  + +  +I+AG+ LL  +   ++    +L++    +LM ++ 
Sbjct: 219 V--IDEAEMRRGIQSVNRVFGDKLSILAGDFLLARSSVCLA----RLRNVKVVELMSTII 272

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKER 209
            ++ ++G +  QM ++Q+        + ++K   KT +LM  +C++   +   +    E 
Sbjct: 273 EHL-VKGEVM-QMRNVQNRSNISLLEYYLRKNYYKTASLMANSCKAALTLGQHTDYVCEM 330

Query: 210 LRCFGENLGIIFQLADDLLDCE 231
              +G +LG+ FQL DD+LD E
Sbjct: 331 GFAYGRHLGLAFQLIDDVLDYE 352


>gi|68164585|gb|AAY87314.1| predicted geranylgeranyl diphosphate synthase [uncultured bacterium
           BAC17H8]
          Length = 341

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 11/182 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R+ +    A   NV+   AL   AAIE +H  SLIHDD+   D   +RR +P V  
Sbjct: 56  GKMLRAKMALRAADHLNVDRYAALHWAAAIEVLHNASLIHDDI--CDGDRLRRERPAVWS 113

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDI 167
            Y    A+  G+ L+  +FE+ +    + +  +  +++   TH   ++    G+    D+
Sbjct: 114 VYGRDVALTLGDWLVALSFELAAEAAQRAQTPMLVKIL--ATH---MKTTTDGEAREFDV 168

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           Q    D          KT  L+    E  A MA    +      CF   LG  +Q+A+D+
Sbjct: 169 Q-PVRDWDHYLKGAGDKTAPLLTAPLEGVAAMALHGGSAPIIGDCF-RALGNAYQIANDI 226

Query: 228 LD 229
           L+
Sbjct: 227 LN 228


>gi|163847417|ref|YP_001635461.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222525266|ref|YP_002569737.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
 gi|163668706|gb|ABY35072.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449145|gb|ACM53411.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
          Length = 345

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 6/182 (3%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV    +    +   AL + A I+ +H +SLIHDD+   D+  +RRG+ T+  
Sbjct: 54  GKLIRPQLVLLACAAAGGDPQQALPLAAGIQLLHDFSLIHDDIE--DDSAMRRGRRTLWH 111

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            +     I AG+ +   A   I     +     R   +L     I L+ +  GQ LD+  
Sbjct: 112 IWGLAHGINAGDAMFVIAHLAIHRLSERGLPAERVLSILRRFDEIILR-ICEGQYLDLSF 170

Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             D  I       +   KT AL+  A E GA  A A       L  FG  +G+ FQ+ DD
Sbjct: 171 EGDLSITPADYLTMIGGKTAALIAGAAELGARAAGADGETVAALADFGRAVGLAFQIEDD 230

Query: 227 LL 228
           +L
Sbjct: 231 IL 232


>gi|71664964|ref|XP_819457.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener]
 gi|70884759|gb|EAN97606.1| polyprenyl synthase, putative [Trypanosoma cruzi]
          Length = 747

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 12/202 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   +R+ +  GGK  R+F +  C++  + ++    R     E  H  SLI DD+   
Sbjct: 438 DTLFLPVRFLIDRGGKCWRTFFLFACSNALSRDYADTSRCVIITELGHVGSLIIDDIE-- 495

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNG--LLTYAFEIISS-PKTQLKD--NIRSQLMLSL 150
           D   +RRG    H+++   TAI AG     ++  F  +SS P  + K    +  ++M + 
Sbjct: 496 DGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVPFADVSSLPAEKAKRFYELYFEMMKAA 555

Query: 151 THNIGLQ----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
               GL     G L   ++   +    E  +  I   KTGA+    C    ++   S+  
Sbjct: 556 HAGQGLDIRGLGYLMPDVVRTGETKALEDALKAIHTCKTGAICGAICSFACVLTDTSEEV 615

Query: 207 KERLRCFGENLGIIFQLADDLL 228
              +  FG+ +G+ +Q+ DD+L
Sbjct: 616 TLAMEEFGKAIGLAYQIIDDVL 637


>gi|115739673|ref|XP_781598.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115924911|ref|XP_001192439.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 300

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 29/175 (16%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY---AFEI 130
           ++    E IH  SL+HDD+  +D    RRGK +++  + +  +I+AG+ +L+    A   
Sbjct: 49  KIAMITEMIHTASLMHDDV--IDAADTRRGKTSINELFGQRKSILAGDFVLSISSQALAR 106

Query: 131 ISSP------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           I  P       T ++D ++ + M            LG +  D ++E    +   M    K
Sbjct: 107 IGDPDVVIVLSTVIEDLVKGEFM-----------QLGSK--DNENERF--SHYLMKTYKK 151

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           T +LM  +C + A++A  S    E    +G N+G+ FQL DD+LD   C++ + K
Sbjct: 152 TASLMAHSCRAVAMLADCSPEVCEIAYQYGRNIGMAFQLVDDILDFVSCDDAMGK 206


>gi|315282959|ref|ZP_07871252.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL
           S4-120]
 gi|313613406|gb|EFR87257.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL
           S4-120]
          Length = 324

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 47  GGKRIRPMFVCLSARLAAEADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 155

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|308234849|ref|ZP_07665586.1| polyprenyl synthetase [Gardnerella vaginalis ATCC 14018]
          Length = 360

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 36/212 (16%)

Query: 49  GGKKIRSFLVTEC--ASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R++L  E   A   N +  TA    L V  A+E     +L+HDD+  +D   +RR
Sbjct: 51  GGKRLRAYLALEAFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDI--IDESALRR 108

Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLT 151
           G+P+ +    +            ++ G+ L T +F+I     T L+ N +  L    ++ 
Sbjct: 109 GRPSAYCALSKACNSKHIGIGLGLMLGDILATQSFDITRKACTNLR-NPQEVLGEFANMQ 167

Query: 152 HNIGLQGMLGGQMLDIQDEFID--------ETQVFMIQKMKTGALMCFACES-GAIMAHA 202
            N+G+     GQ+LD+  E +         E+ + +  + KT +    A  + G + A  
Sbjct: 168 RNVGI-----GQVLDLSIEMMSLKNPKKLAESSINVF-RWKTASYTTIAPLALGFLSAGL 221

Query: 203 SQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
           ++N   +L    GE LGI FQ+ADDL+D   D
Sbjct: 222 NKNYAIKLANDIGEPLGIAFQIADDLIDIVSD 253


>gi|307128579|ref|YP_003880609.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483041|gb|ADM89911.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI]
          Length = 326

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 40/200 (20%)

Query: 48  LGGKKIRS---FLVTE-----CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + GK IR    FL+T+     C   +++ +L        +E +H  SLIHDD+  +D   
Sbjct: 45  IKGKYIRPIFIFLITKMLGNICKKTYDLAYL--------VELMHTASLIHDDV--IDFST 94

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQG 158
            RRG  +++  +   TA+I G+ + +       S    +K+N +  L ++S T    ++ 
Sbjct: 95  TRRGVLSINAIWQNKTAVIFGDYIFS------KSLNIAIKNNYKDYLNIISKT----IEK 144

Query: 159 MLGGQMLDIQ-------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           M  G++  I+       +++I E  +F     KT  ++   CE GA   +  +     ++
Sbjct: 145 MSEGEIFQIEYFHKMNINKYIYEKIIFK----KTAIMIGACCEGGARSINKKKKIILEIK 200

Query: 212 CFGENLGIIFQLADDLLDCE 231
            FGE  G+ FQ+ DDLLD E
Sbjct: 201 KFGELAGMAFQIKDDLLDYE 220


>gi|311114488|ref|YP_003985709.1| putative bifunctional short chain isoprenyl diphosphate synthase
           [Gardnerella vaginalis ATCC 14019]
 gi|310945982|gb|ADP38686.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Gardnerella vaginalis ATCC 14019]
          Length = 366

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 36/212 (16%)

Query: 49  GGKKIRSFLVTEC--ASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R++L  E   A   N +  TA    L V  A+E     +L+HDD+  +D   +RR
Sbjct: 57  GGKRLRAYLALEAFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDI--IDESALRR 114

Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLT 151
           G+P+ +    +            ++ G+ L T +F+I     T L+ N +  L    ++ 
Sbjct: 115 GRPSAYCALSKACNSKHIGIGLGLMLGDILATQSFDITRKACTNLR-NPQEVLGEFANMQ 173

Query: 152 HNIGLQGMLGGQMLDIQDEFID--------ETQVFMIQKMKTGALMCFACES-GAIMAHA 202
            N+G+     GQ+LD+  E +         E+ + +  + KT +    A  + G + A  
Sbjct: 174 RNVGI-----GQVLDLSIEMMSLKNPKKLAESSINVF-RWKTASYTTIAPLALGFLSAGL 227

Query: 203 SQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
           ++N   +L    GE LGI FQ+ADDL+D   D
Sbjct: 228 NKNYAIKLANDIGEPLGIAFQIADDLIDIVSD 259


>gi|156093832|ref|XP_001612954.1| prenyl transferase [Plasmodium vivax SaI-1]
 gi|148801828|gb|EDL43227.1| prenyl transferase, putative [Plasmodium vivax]
          Length = 522

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 23/168 (13%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AA E IH  SL+HDD+  +D+   RRG P +H +Y    +I++G+ LL  A  + + 
Sbjct: 251 KIIAASEIIHMGSLLHDDV--IDDSNNRRGAPALHKKYGNKISILSGDFLLARASSVFAG 308

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKM-KTGALM 189
                      Q+     + +  + ++ G++L    +F    D  + + I+   KT +L 
Sbjct: 309 TGC-------PQICRRFAYVV--ESLIKGELLQTNLKFNNIEDALKTYFIKTYHKTASLF 359

Query: 190 C--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLDCEED 233
              FAC    I   + +NEK    CF  G ++G+ FQL DD LD + D
Sbjct: 360 SHLFAC----IAILSFKNEKVIELCFNLGLHIGMAFQLYDDYLDYKPD 403


>gi|145500940|ref|XP_001436453.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403592|emb|CAK69056.1| unnamed protein product [Paramecium tetraurelia]
          Length = 366

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 85/184 (46%), Gaps = 10/184 (5%)

Query: 50  GKKIRSFLVTECASLF--NVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK IR  L    A+    N  H    R+ AA IE +H  SL+HDD+  +D    RRG P+
Sbjct: 81  GKLIRPMLNLLYANHIEKNSQHTEQQRIWAAVIEILHVASLVHDDI--LDASDTRRGIPS 138

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            H  + +  A  + N L+  A   IS         I SQ+M +LT+   LQ M      +
Sbjct: 139 SHTIFGKHRATFSANYLIGRAGRKISELDDIRMFQIYSQIMDNLTNGEYLQAMKQKSFHN 198

Query: 167 IQDEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               F    Q +MI+   KT AL+  + +    + +      E+    G +LG+ FQ+ D
Sbjct: 199 ----FEITLQNYMIKTYYKTAALIANSLQGVCQLTNIKDEICEKSFNIGLHLGVAFQIID 254

Query: 226 DLLD 229
           D+LD
Sbjct: 255 DVLD 258


>gi|302338112|ref|YP_003803318.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635297|gb|ADK80724.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 322

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 10/184 (5%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L  GK +R   +   A     +   A  + AAIE +H  +LIHDD+  +D+   RRG P 
Sbjct: 42  LAQGKMLRPSFLLLTARCGKFSKKKAYDIAAAIEMLHIATLIHDDV--IDDADTRRGVPA 99

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           VH +     AI+ G+ L +  F I +   T   +N RS     L+  +G           
Sbjct: 100 VHTKIGIRKAILMGDYLFSRCFSIAAQYAT--IENGRS-----LSTAVGFICQSEIDQST 152

Query: 167 IQDEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            + +F    + ++ +   KT AL   +  +GA  +  ++ +    R  G  +G+ FQ+ D
Sbjct: 153 KEYDFAISRRTYLRRIAGKTAALFLLSFHAGASQSKMNKTQVMWARRAGYAIGMAFQIID 212

Query: 226 DLLD 229
           D+LD
Sbjct: 213 DILD 216


>gi|116873372|ref|YP_850153.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742250|emb|CAK21374.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 321

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLSPDADFGAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G I++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGIVSGQSEADYQKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|319440242|ref|ZP_07989398.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile
           DSM 44702]
          Length = 373

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 26/176 (14%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTA 116
           LR   ++E I   +LIHDD+  +D+   RRG+PT H                + Y E  A
Sbjct: 91  LRAVGSLEFIQACALIHDDI--IDHSDTRRGRPTTHRRFEASHRGNGWSGDAVGYGESQA 148

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           I+ G+    +A +++           R++             ++ GQMLDI  E      
Sbjct: 149 ILVGDLAFAWADDMLVDSGVDAASLARAREPWRKMRTE----VIAGQMLDIALENSGSED 204

Query: 177 VFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             M +K+ T     +  E     GA +  A     + LR  G  +GI FQL DD L
Sbjct: 205 PAMSEKVNTYKTAAYTVERPLHLGAALGDADARTVDLLRTAGREIGIAFQLEDDHL 260


>gi|289178875|gb|ADC86121.1| Dimethylallyltransferase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 376

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 35/209 (16%)

Query: 49  GGKKIRSFLVTEC----ASLFNVNHLTALRV-----GAAIECIHCYSLIHDDLPSMDNGY 99
           GGK++R+ L  +     A   +     ++R        AIE     +L+HDDL  +D+  
Sbjct: 62  GGKRLRALLTLDAYDVLAGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDL--IDDSD 119

Query: 100 IRRGKPTVHIQYDEVTA---------IIAGNGLLTYAFEIISSPKTQLKDNIR-SQLMLS 149
           +RRGKP+ H                 ++ G+ L T    I+    T + ++ R  +  LS
Sbjct: 120 LRRGKPSAHCALTSFAGARSIGRGLGLMLGDMLATACTLIMEDASTGMVEHRRLVEAFLS 179

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHA 202
           + H++ +     GQ+LD+  E   +D+ Q        + + KT +    A    A +A  
Sbjct: 180 MQHDVEV-----GQVLDLAIERMPLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASG 234

Query: 203 SQNEKERLRC--FGENLGIIFQLADDLLD 229
             +E   L C   G  LG  FQLADDLLD
Sbjct: 235 MTSEAANLHCHAIGLPLGQAFQLADDLLD 263


>gi|84496184|ref|ZP_00995038.1| putative polyprenyl synthase / dimethylallyltranstransferase
           [Janibacter sp. HTCC2649]
 gi|84382952|gb|EAP98833.1| putative polyprenyl synthase / dimethylallyltranstransferase
           [Janibacter sp. HTCC2649]
          Length = 366

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 43/222 (19%)

Query: 39  LLSAIRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL  +   L GGK++R+ FL     +    +    +R+  A+E     +LIHDD+  MD+
Sbjct: 44  LLDRVGSLLAGGKRLRAAFLYWGHRAAGRADSDELVRLATAMEFFQAAALIHDDV--MDD 101

Query: 98  GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG P  H                 ++    AI+AGN  LT+  E++++    ++D 
Sbjct: 102 SDTRRGMPAAHRALAAVHTERGWGGDDARFGVAGAILAGNLCLTWTDELVATSGLGVEDL 161

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD-----------EFIDETQVFMIQKMKTGALMC 190
            R +++           ++ GQ LD+ D           E I+  Q  +  K        
Sbjct: 162 ARGRVVFDRMRTQ----LMAGQFLDVVDSVRPWDGLPASERIERAQRVIRYKSAK----- 212

Query: 191 FACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  E     GA      + +   L  +G +LG  FQL DDLL
Sbjct: 213 YTVEHPLLIGATAGGLGEADLAHLSSYGLDLGHAFQLRDDLL 254


>gi|307719391|ref|YP_003874923.1| polyprenyl synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533116|gb|ADN02650.1| putative polyprenyl synthetase [Spirochaeta thermophila DSM 6192]
          Length = 376

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 30/211 (14%)

Query: 50  GKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  LV   A +          RVGAA+E      L+HDD+  MD   +RRG P++ 
Sbjct: 73  GKLVRGALVWAGAGVCGGAPEEWCARVGAALELFQSGLLVHDDV--MDRDRVRRGGPSMF 130

Query: 109 IQYD---------------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            QY+               E  A+  G+      F +++       + +R  L+  +   
Sbjct: 131 AQYEGRAGEEGVREARRVGEALAVCVGDVAFFLGFGLLAG--VGRGEAMRDALLRCVAEE 188

Query: 154 IGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKE 208
               G+   QM D+      E +    V  + + KTG          GA++A A +  + 
Sbjct: 189 YARVGVA--QMDDVWYGAAGEGVRLEDVLRVYRYKTGRYTFSVPLSLGALLAGADEGVRG 246

Query: 209 RLRCFGENLGIIFQLADD---LLDCEEDLPK 236
            L   GE LG++FQ+ DD   L   EE++ K
Sbjct: 247 ALEEVGELLGVVFQIRDDELGLFGSEEEIGK 277


>gi|38234187|ref|NP_939954.1| putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200449|emb|CAE50137.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           diphtheriae]
          Length = 374

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 40/216 (18%)

Query: 43  IRYALLGGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           + Y L GGK+IR       F+ +   +    +    L    ++E I   +LIHDD+  +D
Sbjct: 55  VEYVLGGGKRIRPTYAWAGFVASGGLTNKTEDPGAVLTAIGSLELIQACALIHDDI--ID 112

Query: 97  NGYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
               RRG PTVH                 ++ E  AI+ G+  + +A ++         +
Sbjct: 113 ASDTRRGNPTVHRVAERTHAESHRLGDSARFGESIAILVGDLAMVWADDM-------FHN 165

Query: 141 NIRSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES- 195
           +  S   +    N   +GM    +GGQ+LDI  E      + + + +       +  E  
Sbjct: 166 SGLSDAAIRRASN-AWRGMRTEVIGGQLLDIYIESTGSESIELAETVNRFKTAAYTIERP 224

Query: 196 ---GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              GA +A A       LR +G ++G+ FQL DDLL
Sbjct: 225 LHIGAALAGADDQTVHCLRNYGRDIGLAFQLRDDLL 260


>gi|71422877|ref|XP_812265.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener]
 gi|70877026|gb|EAN90414.1| polyprenyl synthase, putative [Trypanosoma cruzi]
          Length = 747

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 12/202 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   +R+ +  GGK  R+F    C++  + ++    +     E  H  SLI DD+   
Sbjct: 438 DTLFLPVRFLIDRGGKYWRTFFFFACSNALSRDYADTSKCIIITELGHVGSLIIDDIE-- 495

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNG--LLTYAFEIISS-PKTQLKD--NIRSQLMLSL 150
           D   +RRG    H+++   TAI AG     ++  F  ++S P  + K    +  ++M + 
Sbjct: 496 DGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVPFAGVNSLPAEKAKRFYELYFEMMKAA 555

Query: 151 THNIGLQ----GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
               GL     G L   ++   +    E  V  I   KTGA+    C    ++   S+  
Sbjct: 556 HAGQGLDIRGLGYLMPDVVRTGETKALEDAVKAIHTCKTGAICGAICSFACVLTDTSEEV 615

Query: 207 KERLRCFGENLGIIFQLADDLL 228
            + +  FG+ +G+ +Q+ DD+L
Sbjct: 616 TQAMEEFGKAIGLAYQIIDDVL 637


>gi|298709043|emb|CBJ30993.1| Geranylgeranyl pyrophosphate synthetase, chloroplast precursor
           [Ectocarpus siliculosus]
          Length = 142

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 44/66 (66%)

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L+ +D+ +   ++  I + KTGAL+  AC +GA++  AS  + + +  F E++G+ FQ+A
Sbjct: 9   LECEDKDVGLEELRWIHRHKTGALLKVACTAGALLGGASDKDVKNMEVFSESIGLAFQVA 68

Query: 225 DDLLDC 230
           DD+LDC
Sbjct: 69  DDILDC 74


>gi|212715644|ref|ZP_03323772.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661011|gb|EEB21586.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM
           16992]
          Length = 394

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 28/205 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +    F    +        L +  A+E     +L+HDD+  +D+  +RR
Sbjct: 83  GGKRLRALLTLDSFRAFASEDVLERDFDALLDLACAVEVFQTGALVHDDI--IDDSDLRR 140

Query: 103 GKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           GKP+ H  +   T +   G+GL     +++++    + D   S+L         L  M  
Sbjct: 141 GKPSAHRAFSTDTHSETIGHGLGIMLGDMLATASVDIADKAASKLTYGSNVVAALLNMHR 200

Query: 162 ----GQMLDIQ---------DEFIDET-QVFMIQKMKTGALMCFA-CESGAIMAHASQNE 206
               GQ+LD+          +E ++ +  VF   + KT +    A  E G + A  S+++
Sbjct: 201 EVEVGQVLDLAVELNPLNDPNELVEASLNVF---RWKTASYTTIAPLEFGMLAAGLSKDD 257

Query: 207 KER-LRCFGENLGIIFQLADDLLDC 230
             R     G  LG+ FQLADDLLD 
Sbjct: 258 ARRHALAVGLPLGLAFQLADDLLDV 282


>gi|322379568|ref|ZP_08053905.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1]
 gi|321147962|gb|EFX42525.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1]
          Length = 301

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 18/181 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +RS L+    S    NH   +   A IE I   SL+HDD+  +D+   RRG P+++ 
Sbjct: 35  GKMLRSQLILAICS----NHPQIVDFCAIIEMIQSASLLHDDV--IDHAQTRRGNPSLNA 88

Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +    AI+ G+   + AF E+ +  K  ++   +S + LS      +QG L        
Sbjct: 89  TFGNTNAIMLGDVFYSKAFCELANFSKEIVQLIAQSVVELSRGEIKDVQGCLA------- 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             F     +++       A +  A   GA +      E  + R FG + G+ FQ+ DDLL
Sbjct: 142 --FNPNKAIYLDTIEDKSASLIAASSCGAALLQGL--EPSKYRDFGRHFGMAFQMVDDLL 197

Query: 229 D 229
           D
Sbjct: 198 D 198


>gi|284995517|ref|YP_003417285.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923]
 gi|284060984|gb|ADB71923.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923]
          Length = 321

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|224498620|ref|ZP_03666969.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes Finland 1988]
          Length = 274

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 18/195 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 47  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 155

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 215

Query: 225 DDLLD---CEEDLPK 236
           DD+LD    E++L K
Sbjct: 216 DDVLDFVGTEKELGK 230


>gi|254434422|ref|ZP_05047930.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27]
 gi|207090755|gb|EDZ68026.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27]
          Length = 346

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 79/188 (42%), Gaps = 18/188 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK+IR  LV      F +N         AL    AIECI   SLIHDD   +D   IRR 
Sbjct: 59  GKRIRGCLV------FLMNQTQEGKLEDALPRAVAIECIQAASLIHDDY--LDEDVIRRK 110

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +P          A++ G+  + +A  I S  +    D       ++   N   Q +    
Sbjct: 111 RPATWTVEGPRRAVLLGD--IMFATAIQSMAELSKDDGATVARAIATVANGAYQELFWQT 168

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               +   + +++     I  +KTGAL   AC+ GAI A A +        FG   G  +
Sbjct: 169 KTRERRLHKLLEKNLYDHIIYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAY 228

Query: 222 QLADDLLD 229
           Q+ADDL D
Sbjct: 229 QIADDLED 236


>gi|308803076|ref|XP_003078851.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri]
 gi|116057304|emb|CAL51731.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri]
          Length = 298

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RRG   ++++     AI+AG+ LL  A   ++S
Sbjct: 41  RLAEIAEMIHVASLLHDDV--LDNAATRRGLRALNLEVGNKLAILAGDFLLARASVTLAS 98

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +      + S+++  L     +Q     + L   + ++ +T        KT +L+  + 
Sbjct: 99  LRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMEHYVKKTY------YKTASLIANSS 152

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++ A++    +   +    +G+NLG+ FQ  DD+LD
Sbjct: 153 KAIALLGGHGEKSADLAYDYGKNLGLAFQFQDDVLD 188


>gi|315453024|ref|YP_004073294.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179]
 gi|315132076|emb|CBY82704.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179]
          Length = 295

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 25/195 (12%)

Query: 47  LLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           LLG GK +RS L+          H   +   A IE I   SL+HDD+  +DN   RR   
Sbjct: 27  LLGQGKMLRSKLILAICP----EHPQLIDFCAIIEMIQSASLLHDDV--IDNAQTRRAHD 80

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    AI+ G+     AF  ++   T++   +   +M           +  G++ 
Sbjct: 81  SINHIFGNQNAIMLGDVFYAKAFLELTKLDTEIAQLVAHSVM----------ELSRGEIK 130

Query: 166 DIQ--DEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D++  D F  D T+   I + K+ +LM  +C   A++      + +  R FG N GI FQ
Sbjct: 131 DVRASDTFHTDITRYIDIIQDKSASLMVASCAGAALLGGL---DSQAYRTFGLNFGIAFQ 187

Query: 223 LADDLLDCEEDLPKK 237
           + DDLLD  +  PK+
Sbjct: 188 IMDDLLDITQ--PKE 200


>gi|77165696|ref|YP_344221.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
 gi|76884010|gb|ABA58691.1| Polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
          Length = 341

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 79/188 (42%), Gaps = 18/188 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK+IR  LV      F +N         AL    AIECI   SLIHDD   +D   IRR 
Sbjct: 54  GKRIRGCLV------FLMNQTQEGKLEDALPRAVAIECIQAASLIHDDY--LDEDVIRRK 105

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +P          A++ G+  + +A  I S  +    D       ++   N   Q +    
Sbjct: 106 RPATWTVEGPRRAVLLGD--IMFATAIQSMAELSKDDGATVARAIATVANGAYQELFWQT 163

Query: 164 MLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               +   + +++     I  +KTGAL   AC+ GAI A A +        FG   G  +
Sbjct: 164 KTRERRLHKLLEKNLYDHIIYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAY 223

Query: 222 QLADDLLD 229
           Q+ADDL D
Sbjct: 224 QIADDLED 231


>gi|284802375|ref|YP_003414240.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578]
 gi|284057937|gb|ADB68878.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578]
          Length = 321

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|322379645|ref|ZP_08053966.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5]
 gi|321147939|gb|EFX42518.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5]
          Length = 301

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 18/181 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +RS L+    S    NH   +   A IE I   SL+HDD+  +D+   RRG P+++ 
Sbjct: 35  GKMLRSQLILAICS----NHPQIVDFCAIIEMIQSASLLHDDV--IDHAQTRRGNPSLNA 88

Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +    AI+ G+   + AF E+ +  K  ++   +S + LS      +QG L        
Sbjct: 89  TFGNTNAIMLGDVFYSKAFCELANFSKEIVQLIAQSVVELSRGEIKDVQGCLA------- 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             F     +++       A +  A   GA +      E  + R FG + G+ FQ+ DDLL
Sbjct: 142 --FNPNKAIYLDTIEDKSASLIAASSCGAALLQGL--EPSKYRDFGRHFGMAFQMVDDLL 197

Query: 229 D 229
           D
Sbjct: 198 D 198


>gi|302539632|ref|ZP_07291974.1| putative mucin-2 [Streptomyces hygroscopicus ATCC 53653]
 gi|302457250|gb|EFL20343.1| putative mucin-2 [Streptomyces himastatinicus ATCC 53653]
          Length = 468

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 30/199 (15%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G+  R ++      L + +      + A  E +H  +L+ DD+   D+   RRG+P+VH 
Sbjct: 150 GRSWRPYVAAAVLCLLDADPEPYRPLTAVTELLHLSALVIDDI--QDDSPTRRGRPSVHE 207

Query: 110 QYDEVTAIIAGNGLLTYAFEII------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            +    AI AG  L  Y F+ +      ++P+T L+     +L L       L+    GQ
Sbjct: 208 VFGTAPAITAGT-LGYYTFDALIQRVPQAAPETMLRIY---RLYLR-----DLRAAHAGQ 258

Query: 164 MLDIQ------DEFIDE-------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            LDI       DE +          +V    ++KTG L+    E  A++  A + + + +
Sbjct: 259 ALDIAGHHAAFDEAVTSGDARPLLDEVRTAHRLKTGMLVRSTAEVSALLGGADERQLDAI 318

Query: 211 RCFGENLGIIFQLADDLLD 229
             + E +G  +Q+ DD+ D
Sbjct: 319 CRYFEAVGTAYQITDDVAD 337


>gi|315425225|dbj|BAJ46894.1| polyprenyl synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 353

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 76/187 (40%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R  L                 + A  E IH  +LI DD+   D   +RRG+P +H
Sbjct: 66  GGKRWRPALTVIVYEALGGGDPGIYILAAVPEIIHNATLIVDDVE--DGSLMRRGEPCIH 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    AI AGN    Y +        +L  N+ +  +      +    +  GQ +DI 
Sbjct: 124 RIYGIDIAINAGNA---YYYIPAYLAAKKLPKNMATLFLEKYVETMTRLSL--GQTMDIV 178

Query: 169 DEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                   I E     +   KTGAL  FA E  AI A    +  E L  FGE +G  FQ+
Sbjct: 179 WHRGLVTDITEEHYLQMAAFKTGALSRFAVELAAIYA-GRGDLLEELGRFGEAVGTAFQI 237

Query: 224 ADDLLDC 230
            DD L+ 
Sbjct: 238 QDDYLNI 244


>gi|117928903|ref|YP_873454.1| polyprenyl synthetase [Acidothermus cellulolyticus 11B]
 gi|117649366|gb|ABK53468.1| Polyprenyl synthetase [Acidothermus cellulolyticus 11B]
          Length = 339

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 13/183 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L    A          +    A+E +H +SL+HDD+  MD    RR +PT  
Sbjct: 53  GGKAVRSALAVLSAQAAGAPAAVGIPGAVAVELVHNFSLLHDDV--MDGDEERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++AG+ LL  AF+++   +     +   + + S T     Q ++ GQ  D+ 
Sbjct: 111 TVFGRSAALLAGDALLGLAFDVLLDAE---HGDAAQRCLGSAT-----QELIAGQFDDLD 162

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +   +   +   KT ALM  A   GA +A A       L  FG +LG+ FQL D
Sbjct: 163 FETRLDVSLDECVSMAGAKTAALMACASSIGARLAGADPALVNALDDFGRHLGLAFQLVD 222

Query: 226 DLL 228
           DLL
Sbjct: 223 DLL 225


>gi|168001212|ref|XP_001753309.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695595|gb|EDQ81938.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 317

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 18/161 (11%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL  A   ++S
Sbjct: 60  RIAEITEMIHVASLLHDDV--LDHADTRRGISSLNHVMGNKLAVLAGDFLLARASVALAS 117

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMC 190
            +      + SQ+         L+ ++ G+++ +  E  D + + + +QK   KT +LM 
Sbjct: 118 LRNTEVVELLSQV---------LEHLVTGEIMQLSVEDKDMSNMDYYMQKTFYKTASLMA 168

Query: 191 FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLD 229
            +C++ A++A   Q E   L  F  G +LG+ +QL DD LD
Sbjct: 169 NSCKAIAVLA--GQPEDVALLAFNYGRHLGLAYQLVDDALD 207


>gi|21955862|emb|CAD42868.1| solanesyl pyrophosphate synthase [Mucor circinelloides f.
           lusitanicus]
          Length = 471

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 19/168 (11%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-- 128
           T  R+    E IH  SL+HDD+  +D    RR  P+ +  +    A++ G+ LL  A   
Sbjct: 210 TQRRLAEISEMIHTASLLHDDV--IDASMTRRNLPSANASFGNKMAVLGGDFLLARASLA 267

Query: 129 -------EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
                  E I    T + + +  + M       G  G +  + L   D ++++T      
Sbjct: 268 LARLRNAECIELMATCIANLVEGEFMQLRNTKEGESGKV--KKLSTFDHYMEKTY----- 320

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            MKTG+L+  +C++ A++  +++        FG+NLG+ FQL DD+LD
Sbjct: 321 -MKTGSLIAQSCKASAVLGGSTKEVANIAYDFGKNLGLAFQLVDDMLD 367


>gi|321473148|gb|EFX84116.1| hypothetical protein DAPPUDRAFT_47316 [Daphnia pulex]
          Length = 302

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 16/160 (10%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +V    E +H   L HDD+  +D+   RR KPT++    +  +I AG+ +L  A E IS 
Sbjct: 50  KVAQVAEMVHGTCLYHDDV--IDDAIKRRAKPTINFLCGQKKSIWAGDFVLGRALETIS- 106

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGML----GGQMLDIQDEFIDETQVFMIQKMKTGALM 189
              Q+ +N    L+  +  N+    ++    G    +   ++ID+T        KT ++ 
Sbjct: 107 ---QISNNKVCILLTRMIQNVVTGELMQLDAGATEEERFSQYIDKT------FKKTASVF 157

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + C++  ++A A    +     FG  LGI +QL D + D
Sbjct: 158 AYPCQAVLVLAGADATLQTTAFEFGRQLGIAYQLVDGITD 197


>gi|108759001|ref|YP_629155.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622]
 gi|108462881|gb|ABF88066.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622]
          Length = 361

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 23/237 (9%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           + LQ     ++T L +L  L   + +  +    L  A  Y L   K++R  LV     L 
Sbjct: 20  AWLQLVQTEVETSLAELFELPDEAGLDVRWTQALTQARAYTLRPAKRLRPALVMAGHCLA 79

Query: 66  NVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTAI 117
             + +      R  A +E +H + LIHDD+   D   +RRG   +H      +  E  A+
Sbjct: 80  RGSAVVPSGLWRFAAGLELLHTFLLIHDDV--ADQAELRRGAAPLHRMLAPGRAGEDLAV 137

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L   A E++          +    +    H         GQ LD+        +V
Sbjct: 138 VVGDHLFARALEVMLGSGLTCVAGVVQYYLGVCRHTAA------GQYLDLDLGRAPLAEV 191

Query: 178 FMIQKMKTGAL------MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            + Q ++   L       C     GA++  AS    E L   G ++G+ +QL DDLL
Sbjct: 192 TLFQTLRVAHLKTARYGFCAPLVCGAMLGGASSGLVEELERVGRHVGLAYQLRDDLL 248


>gi|149924019|ref|ZP_01912402.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
 gi|149815102|gb|EDM74655.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
          Length = 366

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 19/187 (10%)

Query: 49  GGKKIRSF--LVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+ R    L+   A+ +  +      L + AA E +H  +L+HDD+  +D G  RRG+
Sbjct: 84  GGKRFRPMATLLAAQAAGYTCDEAWNDTLTIAAAGELLHTATLLHDDV--IDEGEFRRGR 141

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           P   + Y    +++ G+     A + +S   K     ++   + L     I        Q
Sbjct: 142 PAARLPYGNGLSVLTGDYCFARALQSVSRLGKAAATSSMADAVTLMAEGEI-------AQ 194

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQ 222
           +    +  +D  +  ++ + KT AL+ + C +   +AH    +    L  +G  +G  FQ
Sbjct: 195 LYAAGEWEVDLERYTLVIERKTAALIAW-CTA---VAHLVEPDAAAALARYGREVGFAFQ 250

Query: 223 LADDLLD 229
           +ADD++D
Sbjct: 251 IADDIID 257


>gi|258651230|ref|YP_003200386.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
 gi|258554455|gb|ACV77397.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
          Length = 326

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 17/190 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A +    +    +   A +E IH  +L HDD+  MD   IRRG  + 
Sbjct: 49  GGKRFRPLFTLVAAGVGPRPDAEEVVVASAVVELIHLATLYHDDV--MDEAQIRRGAKSA 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++D   AI+ G+ L  +A  +++S     +D +R   +++ T       ++ GQ  + 
Sbjct: 107 NARWDNSIAILTGDFLFAHASRLVASLG---EDAVR---IIAET----FAELVTGQTRET 156

Query: 168 QDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                DE  +     +   KT +L+        I + A +     LR +G  +G+ FQ++
Sbjct: 157 VGPGPDEDPIDHHLRVLDEKTASLIDTCARYAGIFSGAPEEHVLALRRYGRAVGVAFQIS 216

Query: 225 DDLLD-CEED 233
           DD+LD C  D
Sbjct: 217 DDILDICSTD 226


>gi|256826840|ref|YP_003150799.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM
           15641]
 gi|256582983|gb|ACU94117.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM
           15641]
          Length = 354

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 5/190 (2%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +RY+  GGK+ R  +          +   AL   AAIE  H  +LIHDD+   D   +RR
Sbjct: 59  LRYSRNGGKRHRPLICFAACRAVGGDLDRALSAAAAIEHFHTAALIHDDI--ADEAELRR 116

Query: 103 GKPTVHIQYDEVTAIIAGN-GLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGM 159
           G+P +H+      AI AG+ GL      ++          +R  S+L+      I  Q +
Sbjct: 117 GEPCLHLTEGLGLAINAGDLGLSLVNGTVMEDDALDDATKVRVVSELITMTRRTIEGQAL 176

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             G   D + +   E  + M                GAI+   ++ E E LR +G + G+
Sbjct: 177 DIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIVGGGTEGEIEGLRNYGLDTGL 236

Query: 220 IFQLADDLLD 229
            FQ+ DDLL+
Sbjct: 237 AFQIQDDLLN 246


>gi|321473072|gb|EFX84040.1| hypothetical protein DAPPUDRAFT_223125 [Daphnia pulex]
          Length = 378

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 16/160 (10%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           RV   +E IH   L HDD+  +DN   RR +P+++  +    +I+AG+ +L  +  II+ 
Sbjct: 127 RVCQVLEMIHAAGLYHDDV--IDNAESRRSRPSINNVWGVKKSILAGDFVLGRSMRIIA- 183

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALM 189
              ++ +   S L+ ++  +I +  ++       ++E    ++D+T        KT +L+
Sbjct: 184 ---EINNEDVSILLNTMIDHIVIGEIMQLSAGATEEERFAHYVDKT------FKKTASLL 234

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +C++ +++A A  + +      G  LG+ FQL DD+LD
Sbjct: 235 AHSCQAVSVLAGADSDVQAMGFTLGRQLGMAFQLVDDILD 274


>gi|228470131|ref|ZP_04055040.1| polyprenyl synthetase [Porphyromonas uenonis 60-3]
 gi|228308269|gb|EEK17124.1| polyprenyl synthetase [Porphyromonas uenonis 60-3]
          Length = 87

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             A+E  H ++L+HDD+  MDN  +RRGKP+V+ +Y    AI++G+ +L  A+++++
Sbjct: 24  AVALEVFHNFTLLHDDV--MDNSPVRRGKPSVYAKYGLTPAILSGDAMLILAYQMLT 78


>gi|255583629|ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 308

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS- 144
           +  H+++P  D       +P  H  +     ++ G+G++ +AFE+++      +DN    
Sbjct: 120 AFTHENIPLTDRPR-PSARPMFHHTFGPNIELLTGDGMIPFAFELLAQLNNPAQDNSDRI 178

Query: 145 -QLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFACESGA 197
            ++M+ ++  +G QGM+ GQ  + Q      DE      +  + K K GA    A   GA
Sbjct: 179 LRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWLRDVCKKKEGASHACAGACGA 238

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I+   ++ E E+LR +G  +G I  + + +   EE
Sbjct: 239 ILGGGNEEEIEKLRRYGLYVGTIQGIYNKVEGNEE 273


>gi|261415263|ref|YP_003248946.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371719|gb|ACX74464.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 334

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 23/214 (10%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---TEC-ASLFNVNHLTALRVGAA 78
           +++Q A +     +DRL++        GK+IRS L+     C A   +++ +      AA
Sbjct: 29  VIMQVAKNAPAGISDRLVTLFSRK---GKRIRSTLLCLLANCGAQKPDIDRVA--HACAA 83

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  SL+HDD+  +D   +RRG+ T H ++    A++ G+ +L+ +   +   + + 
Sbjct: 84  VELLHLASLVHDDI--IDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVIDEQAR- 140

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACES 195
             NI   +++S   +     ++ G+++++    D  +       I   KT AL+  A   
Sbjct: 141 --NI--PVIISDAAD----KLIIGEIMELDHCGDMSLSRKSYNEIIDGKTAALIDAAARI 192

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           G I+A   Q   +     G + GI FQ+ DDLLD
Sbjct: 193 GGILAGFDQPMVDECAKMGTHFGIAFQIIDDLLD 226


>gi|309812764|ref|ZP_07706503.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
 gi|308433281|gb|EFP57174.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
          Length = 402

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 100/256 (39%), Gaps = 63/256 (24%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT- 59
           +  GLPS     +  ++T++ DLL                        GGK +R  LV  
Sbjct: 74  VTAGLPSSALVEASSLETLVRDLLAA----------------------GGKLVRPRLVRL 111

Query: 60  ------ECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
                 EC +  +    T   +RV AA E +H + L+ DD+  MD    RRG PT H Q 
Sbjct: 112 GYLAARECTNPDDDPATTDAVVRVAAAFELLHLFGLLQDDV--MDASDTRRGTPTAHHQV 169

Query: 112 ---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
                           +  A++AG+     A  ++ +    + D   + ++  +T     
Sbjct: 170 RAAAAQPDGPDAARLGDSVAVLAGDLAFALANRLVRALPEHVADAWDAAVVELVT----- 224

Query: 157 QGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRC 212
                GQ LD+    +  +DE     +   K+GA       E GA++A  S      L  
Sbjct: 225 -----GQRLDLVFAAEARLDEVSTRRVAHAKSGAYTVQRPLEIGALLAGESAPPTW-LSR 278

Query: 213 FGENLGIIFQLADDLL 228
           FG  LG  F LADD++
Sbjct: 279 FGAALGEAFALADDII 294


>gi|170290882|ref|YP_001737698.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174962|gb|ACB08015.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 289

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 29/220 (13%)

Query: 22  DLLLQTA--SHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVG 76
           DL L  A  ++M+    D L+  ++    GGK+IR    FL+ E         L A    
Sbjct: 34  DLALMEALRNNMENPFADPLIEFMK----GGKRIRPAILFLINEACGGGGSPELAA---- 85

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E IH  SLIHDD+    +   RRG P+ HI++    AI+  + +L+   EI+S    
Sbjct: 86  AAVELIHTASLIHDDIIDDSD--SRRGIPSFHIKHGTEMAILIADFILSIVLEIVS---- 139

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFA 192
           + +D    +L+   T  + +     G+M+++    + + I       + K KT +L   A
Sbjct: 140 KYEDKRIGRLLSEATKLMSI-----GEMMEVILLRRGDPISVEDYLNVLKYKTASLFQTA 194

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              GA++A    +  E +  +G  LG+ +Q+ DDLLD  E
Sbjct: 195 SSLGALIA-GRDDLYEEMGLYGLYLGLSYQIRDDLLDWGE 233


>gi|313607945|gb|EFR84079.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes FSL F2-208]
          Length = 324

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD+    +  +RRG+ T+
Sbjct: 47  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDDAD--LRRGRETI 104

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 105 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 155

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 156 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQIT 215

Query: 225 DDLLD 229
           DD+LD
Sbjct: 216 DDVLD 220


>gi|217963918|ref|YP_002349596.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes HCC23]
 gi|217333188|gb|ACK38982.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes HCC23]
 gi|307571512|emb|CAR84691.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes L99]
          Length = 321

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD   +D+  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDD--VVDDADLRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|294085694|ref|YP_003552454.1| polyprenyl synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665269|gb|ADE40370.1| Polyprenyl synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 340

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R+ +    A L  ++   AL    +IE +H  SLIHDD+   D   +RRG+  V  
Sbjct: 56  GKMLRAKMALSAAKLLKIDQAAALHWSTSIEVLHNASLIHDDI--CDGDKMRRGRVAVWA 113

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y    A+  G+ L+  +FE+ +    +    +   L+  L  ++            IQ 
Sbjct: 114 KYGRDVALTLGDWLIALSFELAAEAAQRANTPM---LVKILAKHMATTTAGEAAEFSIQS 170

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLL 228
            +        I   KT  L+    E  A MA H   +    +  +  +LG  +Q+A+D+L
Sbjct: 171 SY-SWDHYLRIAGDKTAPLLTAPLEGIAAMALHG--DAAGAIGSYFRHLGEAYQIANDIL 227

Query: 229 ---------DCEEDLPKK 237
                    DC  DL ++
Sbjct: 228 NFRAGDGAADCGSDLARR 245


>gi|290892090|ref|ZP_06555086.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           J2-071]
 gi|290558213|gb|EFD91731.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           J2-071]
          Length = 321

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+IR   V   A L       A++    AIE IH  S++HDD   +D+  +RRG+ T+
Sbjct: 44  GGKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDD--VVDDADLRRGRETI 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++    A+  G+ L   + E +    T++KD    +++  +T  +       G++  +
Sbjct: 102 KSKWGNHIAMYTGDFLFAKSLEYM----TEIKDVAAHKMLSHVTVELST-----GEIEQL 152

Query: 168 QDEF-IDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D++  D++    ++  K KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ 
Sbjct: 153 KDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQIT 212

Query: 225 DDLLD 229
           DD+LD
Sbjct: 213 DDVLD 217


>gi|49259555|pdb|1VG3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima A76yS77F
           MUTANT
          Length = 299

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H Y L+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLYFLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|296206331|ref|XP_002750182.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial
           [Callithrix jacchus]
          Length = 308

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 37/197 (18%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRRG 103
           K  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RRG
Sbjct: 27  KAFRPIIVALMARACNIHHNNSQHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRRG 84

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYA---------FEIISSPKTQLKDNIRSQLMLSLTHNI 154
           K TV   + E  A++AG+ +L+ A           +IS     ++D++RS+ +       
Sbjct: 85  KHTVDKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDSVRSEFL------- 137

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRC 212
                LG +      E  +E     ++K   KT +L+  + ++ +++        E    
Sbjct: 138 ----QLGSK------ENENERFAHYLEKPFKKTASLIANSYKAVSVLGCPDPVVHEIAYQ 187

Query: 213 FGENLGIIFQLADDLLD 229
           +G+N+GI FQL DD+LD
Sbjct: 188 YGKNIGIAFQLIDDVLD 204


>gi|271965184|ref|YP_003339380.1| geranylgeranyl pyrophosphate synthase-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270508359|gb|ACZ86637.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 350

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 23/157 (14%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN-GLLTYAFEIISSPKTQLKDN 141
           H +SL+HDD+  MD    RR +P     +    AI+AG+  L      +  SP  ++   
Sbjct: 105 HDFSLLHDDI--MDGDLTRRHRPAAWSVFGVGEAILAGDVLLTLALDLLAGSPGLRV--- 159

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ-----KMKTGALMCFACESG 196
               L  SL        +  GQ  D+   F   T V + Q       KTGAL+  ACE G
Sbjct: 160 ----LTGSLLR------LCSGQSADLA--FETRTDVTLAQCVEMAAGKTGALLGCACEIG 207

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A+   A Q+       FG +LG+ FQL DDLL    D
Sbjct: 208 ALAGGAGQDRAGLFGRFGHHLGLAFQLTDDLLGIWGD 244


>gi|326774821|ref|ZP_08234086.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
 gi|326655154|gb|EGE40000.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
          Length = 349

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 26/169 (15%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKT 136
           A+E IH +SLIHDD+  MD    RR +PT+   Y    A++AG+ L   A   ++ +P  
Sbjct: 88  AVELIHTFSLIHDDI--MDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLAEAPGP 145

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLG----GQMLDIQDEFIDET--------QVFMIQKMK 184
                +R            L G LG    GQ  D+  E    T        +   +   K
Sbjct: 146 GGAAAVRQ-----------LAGALGDLVHGQAQDLLFESRPWTGPGAVLPHEYRSMATHK 194

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TG+L+  A   GA++A A  +  E L   G ++G+ FQ  DDLL    D
Sbjct: 195 TGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDLLGIWGD 243


>gi|118594190|ref|ZP_01551537.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Methylophilales bacterium HTCC2181]
 gi|118439968|gb|EAV46595.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Methylophilales bacterium HTCC2181]
          Length = 322

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR+ L     SL  ++  T ++     E IH  SL+HDD+   D    RRG+ TV  
Sbjct: 51  GKWIRAKLALATGSLLGLSSETYIKWAVVCELIHSASLLHDDV--CDKDLYRRGRLTVWK 108

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++    AI  G+ L+  +F+ I    T++       ++L L  +  ++ ++ GQ +D+  
Sbjct: 109 EFGIPAAICTGDYLIAESFKKI----TEISQGWHQTILLKLLSS-SVKDIVFGQSVDVSV 163

Query: 170 E--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +   +D      I   KTG L+               +E   L+   ENLG+ +Q  +D+
Sbjct: 164 DSVLLDWANYQKIAIKKTGPLIMLPIMGMFKCKEFDGDECIALKEISENLGLAYQWVNDI 223


>gi|302325898|gb|ADL25099.1| polyprenyl synthetase family protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 317

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 29/217 (13%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV---TECAS----LFNVNHLTALRV 75
           +++Q A +     +DRL++        GK+IRS L+     C +    +  V H  A   
Sbjct: 12  VIMQVAKNAPAGISDRLVTLFSRK---GKRIRSTLLCLLANCGAQKPDIDRVAHACA--- 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E +H  SL+HDD+  +D   +RRG+ T H ++    A++ G+ +L+ +   +   +
Sbjct: 66  --AVELLHLASLVHDDI--IDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVIDEQ 121

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFA 192
            +   NI   +++S   +     ++ G+++++    D  +       I   KT AL+  A
Sbjct: 122 AR---NI--PVIISDAAD----KLIIGEIMELDHCGDMSLSRKSYNEIIDGKTAALIDAA 172

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              G I+A   Q   +     G + GI FQ+ DDLLD
Sbjct: 173 ARIGGILAGFDQPMVDECAKMGTHFGIAFQIIDDLLD 209


>gi|313606489|gb|EFR83338.1| polyprenyl synthetase [Listeria monocytogenes FSL F2-208]
          Length = 206

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 86/162 (53%), Gaps = 18/162 (11%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +Y    A+  G+ L    F+I+S+  + + +NI         ++  ++ +L G++  +
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSV-ENIE-------FNSKNIEKILMGELDQM 155

Query: 168 QDEFIDETQVFMIQKM-----KTGALMCFACESGAIMAHASQ 204
           +  +  +T V + + +     KT  L   +C SGA  + A++
Sbjct: 156 RTSY--KTNVTVREYLTRISGKTAQLFALSCYSGATGSKATR 195


>gi|256832658|ref|YP_003161385.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
 gi|256686189|gb|ACV09082.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
          Length = 368

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 47/225 (20%)

Query: 39  LLSAIRYALLGGKKIRSFLVTEC-----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           L++A R    GGK++R+ L+        +    ++      VGAA+E     +L HDD+ 
Sbjct: 45  LMTAWRSLTSGGKRVRALLMYHVFRGIESGRSGLSDEDLYGVGAALELFQAAALFHDDV- 103

Query: 94  SMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYA---FEIISSP 134
            MD    RRG+PTVH                  Y +  AI+ G+  L  +   F   ++P
Sbjct: 104 -MDRSDTRRGEPTVHRVFAQRHRTSQWVGDPDLYGQSAAILLGDLSLVASEQLFRSATAP 162

Query: 135 ---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ETQVFMIQKM 183
              +++ +D+  +  M+             GQ +D   + +         +  + +I   
Sbjct: 163 GQHRSRARDHFDAMRMIVTV----------GQFMDTHAQVVPLSDDDDAMQRALDVIATK 212

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            T   +      GA +A A     E+LR FG+ LG  FQL DD L
Sbjct: 213 TTHYSVVAPLLIGAALAGAPTRVDEQLRAFGQPLGTAFQLIDDDL 257


>gi|217039783|gb|ACJ76979.1| geranyl diphosphate synthase [Linum usitatissimum]
          Length = 209

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG  ++++      A++AG+ LL+ A   ++S
Sbjct: 56  RIAEITEMIHVASLLHDDV--LDDADTRRGIKSLNLVMGNKVAVLAGDFLLSRACVALAS 113

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +      + S L   + H +  + M   QM    ++             KT +L+  +C
Sbjct: 114 LR---NTEVVSLLATVVEHLVTGETM---QMTTTSEQRCSMEYYMQKTYYKTASLISNSC 167

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++ A++A  +         +G NLG+ FQL DD+LD
Sbjct: 168 KAVALLAGQTTEVATLAFEYGRNLGLAFQLIDDVLD 203


>gi|291236349|ref|XP_002738102.1| PREDICTED: PDSS1 protein-like [Saccoglossus kowalevskii]
          Length = 403

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 12/157 (7%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V    E IH  SLIHDD+  +D    RRGK  V+  + +  AI+ G+ +L+ +  +++  
Sbjct: 153 VAMIAEMIHTASLIHDDV--IDAADTRRGKAAVNEIWGQKNAILVGDFILSKSSALLARI 210

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFA 192
             +    + SQ +  L     +Q  LG +    +DE  +E     +QK   KT +L+  +
Sbjct: 211 GNKEVVIVISQAIDDLVRGEFMQ--LGSK----EDE--NERFAHYLQKTYKKTASLIANS 262

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           C++ +I++  +    E    +G N+GI FQL DD+LD
Sbjct: 263 CKAVSILSGCNPAIVEITYQYGRNMGIAFQLVDDMLD 299


>gi|229915238|gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humulus lupulus]
          Length = 279

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 11/157 (7%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+   +A+  +H  +  H+ LP  D+       P +H  YD    ++  + +L   FE++
Sbjct: 76  AIAAASALRLLHAANFTHEHLPLTDSP---SPSPVIHNSYDPSIQLLMPDAILPLGFELL 132

Query: 132 SSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQM------LDIQDEFIDETQVFMIQKM 183
           +      ++N     ++++      G +G+L GQ       +   DE  +  +V    + 
Sbjct: 133 AQSYNPAQNNSDRVLRVIVEFARAFGSKGILDGQYRQRVVSISNGDEVDNAERVDCSGRE 192

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           K G +   A   GAI+  A++ E E+LR FG  +G+I
Sbjct: 193 KEGKMHACAAACGAILGDANEEETEKLRTFGLYVGMI 229


>gi|15639670|ref|NP_219120.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025908|ref|YP_001933680.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           SS14]
 gi|2072008|gb|AAB53642.1| octaprenyl-diphosphate synthase [Treponema pallidum]
 gi|3322980|gb|AAC65646.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018483|gb|ACD71101.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           SS14]
          Length = 364

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 21/163 (12%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-- 132
           + A +E IH  SL+HDD+   D+   RRGKP  +++Y     + A + L  +A  +I   
Sbjct: 98  LSAVVELIHTASLLHDDIE--DHSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTL 155

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFI-DETQVFMIQKMKTGA 187
           S +  LK  + S   +S T  + +     GQ LDI      E I    Q   +  +KTGA
Sbjct: 156 SIEPALKAALFSA-TISATRALHM-----GQALDIAWHRSPELIPSRAQYLRMVALKTGA 209

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGEN---LGIIFQLADDL 227
           L+  + E G + A  S  E    R FG     +GI FQ+ DD+
Sbjct: 210 LIALSGELGFLCAGYSAREA---RSFGAQVMPIGIGFQILDDV 249


>gi|313672526|ref|YP_004050637.1| polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939282|gb|ADR18474.1| Polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 323

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 10/182 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R   +   + L        + +   +E IH  +L+HDD+  +D    RRG+P+ +
Sbjct: 43  GGKRLRPIFMFLSSGLGGYTGNRDVILSGVVEYIHTATLLHDDV--IDGAKFRRGRPSAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +     ++ G+ L + AF  +      +KD + + Q++L+       +G +  Q++  
Sbjct: 101 QAFGNDITVLCGDFLYSRAFVNL------VKDGDPKVQMILANAAKTMSEGEVF-QLVKT 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  +   +   I   KT  L    CE GA++A       + +  FG+ +G+ FQ++DD+
Sbjct: 154 ANFNLSFEEYNKIIFSKTAVLFSACCEIGAMLAGFDGERVKMMAEFGKIVGLSFQMSDDI 213

Query: 228 LD 229
           LD
Sbjct: 214 LD 215


>gi|317152516|ref|YP_004120564.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942767|gb|ADU61818.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 322

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 14/184 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A     +      +  ++E +H  +L+HDD   +D+  +RRG+   H
Sbjct: 41  GGKRIRPMLTLLFARAMGYDRDDYHAIACSLELLHSATLLHDDY--LDDAELRRGRSAAH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
           + +     I+AG+ LL  A E+ +        N R   +L+     G+     G++ +I 
Sbjct: 99  LVFGRTETILAGDALLALANEMGAR-----YGNARLCWLLAR----GIMETAVGEIEEIR 149

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +   +D      I   KT  L+  AC  GA +A A+  +++    +G NLGI FQL D
Sbjct: 150 FSKHPTLDREAYMNIIIGKTARLIECACRCGAALAGATPEQEDAAGEYGLNLGIAFQLVD 209

Query: 226 DLLD 229
           D LD
Sbjct: 210 DALD 213


>gi|256370650|ref|YP_003108475.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009442|gb|ACU52802.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 317

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 19/190 (10%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           + L  GK +R  L+     +         ++ + IE IH  S+IHDD+  +DN   RRG 
Sbjct: 36  FFLKKGKYVRPLLIFLITKMLGTISKKTYKLASIIELIHTASIIHDDV--IDNSSFRRGF 93

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T++  ++   A+I G+ + + +  +  +  +   +N+ S L+L ++     +G L  Q+
Sbjct: 94  LTINSLWNNKIAVIFGDYIFSKSLNLALNHNSNHYNNLFSNLILKMS-----EGEL-YQI 147

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACE-SGAIMAHASQNEKERLRCFGENLGII--- 220
             I++    E     I   KT  L+   CE SG ++      +K+    F + +GI+   
Sbjct: 148 DFIKNHKFSEKNYKKIIFNKTALLISTCCEQSGKLL------QKKHTLFFLKKIGILIGL 201

Query: 221 -FQLADDLLD 229
            FQ+ DDLLD
Sbjct: 202 SFQIKDDLLD 211


>gi|182434309|ref|YP_001822028.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178462825|dbj|BAG17345.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 349

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 26/169 (15%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKT 136
           A+E IH +SLIHDD+  MD    RR +PT+   Y    A++AG+ L   A   ++ +P  
Sbjct: 88  AVELIHTFSLIHDDI--MDGDETRRRRPTLWKAYGTGPAVLAGDALFALAVSTLAEAPGP 145

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLG----GQMLDIQDEFIDET--------QVFMIQKMK 184
                +R            L G LG    GQ  D+  E    T        +   +   K
Sbjct: 146 GGAAAVRQ-----------LAGALGDLVHGQAQDLLFESRPWTGPGAVLPHEYRSMATHK 194

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TG+L+  A   GA++A A  +  E L   G ++G+ FQ  DDLL    D
Sbjct: 195 TGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAFQAVDDLLGIWGD 243


>gi|296393493|ref|YP_003658377.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985]
 gi|296180640|gb|ADG97546.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985]
          Length = 378

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 30/178 (16%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAI 117
           RV AA+E +    L+HDD+  +D   +RRG+P++H +++                E  AI
Sbjct: 98  RVCAALELLQAGLLVHDDI--IDQSDLRRGEPSLHRRFEAEHSREGWSGDAARHGEALAI 155

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRS---QLMLSLTHNIGLQGMLGGQMLDI----QDE 170
           +AG     +A ++ +     +    R+   ++  ++   +     +GGQ LD+     D+
Sbjct: 156 LAGELAFVWADDLAAEGLDAVAGADRTAFRKVWSAMRAEV-----IGGQCLDVLAQAGDD 210

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             +E    +I+       +    E G ++A A+++     R FG+++G+ FQL DDLL
Sbjct: 211 ESEEAATRVIRWKTASYTVARPLELGGVLACANESLLTFYRSFGDDVGVAFQLHDDLL 268


>gi|254470016|ref|ZP_05083420.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062]
 gi|211960327|gb|EEA95523.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062]
          Length = 337

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F       + + A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 56  GGKRLRPMLTLAFAQMFGYEGEGHVILAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++   ++     I S+    +     LQ  LG      Q
Sbjct: 114 KLWGNQASVLVGDYLLGQAFKMMVDVRSLEALRILSEASAIIAEGEVLQ--LGAA----Q 167

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D          + + KT AL   ACE    +A      +   R FG  LG  FQL DD L
Sbjct: 168 DTTTTYDMYLRVIEAKTAALFAAACEVSPEIADKGDEMRAAARKFGLELGYAFQLVDDAL 227

Query: 229 D 229
           D
Sbjct: 228 D 228


>gi|282865685|ref|ZP_06274735.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282559329|gb|EFB64881.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 363

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 23/205 (11%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104
           ++ GGK++R  L+ E A L +      L   A +IE +H + L+HDDL  +D+   RRG 
Sbjct: 57  SMRGGKRMRVVLLHEAAGLVSAEPAEGLDAAALSIELLHTHGLVHDDL--IDDSPTRRGG 114

Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           P+ +  Y E             ++AG+  L  +  ++   + +L   +R  +  + T   
Sbjct: 115 PSTYYAYRERFPRLPQAALGLTVLAGDLALGLSLRVLL--EARLPVALRQAMAEAQTRAA 172

Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK--E 208
                  GQ++D++ +F      E  +  +   K+      A     ++A   Q E   +
Sbjct: 173 A--DTFVGQIVDLERDFTGAVPGEDVLHSVADFKSARYSVLAPMRLGLLAAGGQPEAFDQ 230

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            LR +   +GI  Q+ DD LD   D
Sbjct: 231 ELRRYARLVGICGQMRDDYLDLYGD 255


>gi|262195439|ref|YP_003266648.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365]
 gi|262078786|gb|ACY14755.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365]
          Length = 348

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 22/229 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLL--SAIRYALLGGKKIRSFLVTECASLFNVN 68
           E S R+  +LD+   +  S +     +R L   A  +    GK+ R+ LV  C  L   +
Sbjct: 18  EASARLLALLDESFAEIDSGLPPHLWERALLGPAREFLRRPGKQFRARLVEVCWRLAGGD 77

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +   +E +H  SLI DD+   D    RRG P +H  Y    A+  GN +  +  
Sbjct: 78  SAMPIELPLVVELLHAGSLIVDDIE--DGSSTRRGGPALHHLYGTSIALNTGNWMYFWPL 135

Query: 129 EIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VF 178
            +I     S +   + + R++  L L H         GQ LD+  +  +  Q      V 
Sbjct: 136 TLIDRLDQSSERSAEMHRRTRQTLVLCHQ--------GQALDLALKVTELEQSEVPHVVR 187

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              + KT ALM  A   GAI A A     + +  FG  LG+  Q+ DDL
Sbjct: 188 ATTRSKTSALMSLAAALGAIAAGAESRVLDAVTRFGTELGVGLQMLDDL 236


>gi|170781757|ref|YP_001710089.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156325|emb|CAQ01473.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 373

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 105/260 (40%), Gaps = 55/260 (21%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYA---LLGGKKIRS-FLVTECASLFNVNHLT 71
           + T LDD L   A+ ++    D L+    ++   L GGK+ R+ F      S+ ++    
Sbjct: 11  VQTRLDDFLTAQAAGLREISPD-LVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSP 69

Query: 72  ALR--------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----- 112
           A R              V A +E  H  +LIHDD+  +D    RRG+P  H +++     
Sbjct: 70  AGRPQGEERPGYRAVVGVAAGLEIFHAAALIHDDI--IDRSDTRRGRPAAHRRFEALHAA 127

Query: 113 -----------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                      E  A + G+ LL ++ E++      L D   ++   +    +  Q  LG
Sbjct: 128 SGWGGSSAGFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELATMRTQVTLG 187

Query: 162 GQMLDIQDEFIDETQ-------------VFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            Q LD+ +E    T              V+   K    A +      GA +A A+  +  
Sbjct: 188 -QYLDVLEEVAWPTVPEDDTLARAHNVIVYKSAKYSIEAPLVV----GASLAGATPEQVA 242

Query: 209 RLRCFGENLGIIFQLADDLL 228
            LR  G  LGI FQL DD+L
Sbjct: 243 ALRAVGLPLGIAFQLRDDVL 262


>gi|290975757|ref|XP_002670608.1| predicted protein [Naegleria gruberi]
 gi|284084169|gb|EFC37864.1| predicted protein [Naegleria gruberi]
          Length = 437

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 14/167 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++    E IH  SLIHDD+  +D+   RRG P ++       A++AG+ LL  A   ++ 
Sbjct: 185 KLAETTELIHVASLIHDDI--VDDADTRRGIPALNKNVGNKVAVLAGDFLLGRASINLAR 242

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  ++ S ++  L +   LQ M G   LD   ++  +T  F     KT +L+  +C
Sbjct: 243 IGNIESIDLISTVIEHLAYGEVLQ-MAGKGKLDF--DYYMKTIFF-----KTSSLIANSC 294

Query: 194 ESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           ++ A+++ ++  E  +    FG+++GI +QL DD LD    + DL K
Sbjct: 295 KASAVLSGSTNRELIDAAYTFGKHVGIAYQLTDDSLDFTQSQNDLGK 341


>gi|294816499|ref|ZP_06775142.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294329098|gb|EFG10741.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 397

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 56/257 (21%)

Query: 9   LQENSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---S 63
           L  N + ++T L+  L+  Q A+       + + +   +   GGK++R  L   C     
Sbjct: 49  LLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCI-CGWYAG 107

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH---------IQYDEV 114
               +    ++  A++E  H ++LIHDDL  MD+   RRGKPTVH         ++  E 
Sbjct: 108 GGAGDMAAVVQAAASLEMFHAFALIHDDL--MDHSDTRRGKPTVHRSLAAHHSALRGQEA 165

Query: 115 T-------AIIAGNGLLTYAFEIISSPK---------TQLKDNIRSQLMLSLTHNIGLQG 158
                   AI+ G+  L ++ E++ +             + D +R+++M           
Sbjct: 166 ASHLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMY---------- 215

Query: 159 MLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLR 211
              GQ LD+    D  +D      + + KT     + CE     GA +A A     E   
Sbjct: 216 ---GQYLDLCAAGDPTLDLDAALTVARYKTAK---YTCERPLHIGASLAGAGLAVLEACT 269

Query: 212 CFGENLGIIFQLADDLL 228
            +   LG  FQL DDLL
Sbjct: 270 AYALPLGEAFQLRDDLL 286


>gi|240171992|ref|ZP_04750651.1| polyprenyl synthase [Mycobacterium kansasii ATCC 12478]
          Length = 385

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 17/194 (8%)

Query: 50  GKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GK+IR+ L   C     S   V+   A+ +  AIE  H  SLIHDD+   D   +RRG  
Sbjct: 101 GKRIRAGLGLACFRLQPSAATVSPAEAIDLACAIEMFHESSLIHDDI--CDGSLLRRGAR 158

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN----IRSQLMLSLTHNIGLQGMLG 161
           +V   +    A  AG  L   A +I++     + DN     R     ++T+   L  +  
Sbjct: 159 SVPAAFGVRIAARAGFHLAGTALQILAR---VVADNPAVFARVGEDPAITYLDQLSELSF 215

Query: 162 GQMLDIQDEFIDETQVFM----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ+++     ID++ +      +   KTG L   AC  G        +    L  + + L
Sbjct: 216 GQLIETLPPAIDDSVLRRHYERVAGAKTGTLFRLACSYGGTAGGVDADGLRALMRYADQL 275

Query: 218 GIIFQLADDLLDCE 231
            + FQ+ DD+ D E
Sbjct: 276 ALAFQIMDDVCDVE 289


>gi|293376156|ref|ZP_06622402.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
 gi|325845300|ref|ZP_08168603.1| putative heptaprenyl pyrophosphate synthase component 2
           [Turicibacter sp. HGF1]
 gi|292645229|gb|EFF63293.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
 gi|325488661|gb|EGC91067.1| putative heptaprenyl pyrophosphate synthase component 2
           [Turicibacter sp. HGF1]
          Length = 321

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 18/193 (9%)

Query: 49  GGKKIRSFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGKKIR  L          ++ HL  L   A +E +H  +L+HDD+  +D+   RRG+ T
Sbjct: 44  GGKKIRPGLCIIGGEFGDKDIKHLYHL--SAVLEMLHMATLVHDDI--IDDSVQRRGQLT 99

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
              +Y +  A+  G+ + T  FEI++       ++     M  L+  +    M  G++  
Sbjct: 100 TQQKYGKDYAVYTGDYIFTKCFEILA-------EHYELHHMKELSKTVSRVCM--GEIDQ 150

Query: 167 IQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               F   T V    K+   KT AL+  +   GA  +   +   ++L   G ++G  FQ+
Sbjct: 151 FDGRFKSHTSVKKYLKVIGAKTSALLAVSLSVGAYESGCDEKFCKKLGKIGLHIGNAFQI 210

Query: 224 ADDLLDCEEDLPK 236
            DD+LD   D  +
Sbjct: 211 IDDILDYVGDASR 223


>gi|148270387|ref|YP_001244847.1| polyprenyl synthetase [Thermotoga petrophila RKU-1]
 gi|147735931|gb|ABQ47271.1| Polyprenyl synthetase [Thermotoga petrophila RKU-1]
          Length = 298

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 67  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFYTVEEIGN 124

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
              D +R   +     N+ ++ M   ++++    +  I + +  +I + K+GAL   A +
Sbjct: 125 ---DRLRRTFL-----NV-IRRMSEAELIEQLSRYKPITKEEYLLIVEGKSGALFGLALQ 175

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A+         E L   G  +G I+Q+ DD++D
Sbjct: 176 LPALFEGEL---GEDLYNLGVTIGTIYQMFDDIMD 207


>gi|218887577|ref|YP_002436898.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758531|gb|ACL09430.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 331

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 28/162 (17%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKT 136
           ++E +H  +L+HDD+  +D   +RRG P  H  + +   ++AG+ LL  A  I++     
Sbjct: 79  SVELLHSATLLHDDI--LDGADLRRGLPAAHTMFGQTETVLAGDALLALANRIVARYGDA 136

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QDEFIDETQVFMIQKMKTGA 187
           +L + I   ++ + T          G++++I          D +ID      I   KT  
Sbjct: 137 RLTETIAEAIVQTAT----------GEIVEIAHQRSTDHGHDTYID------IITGKTAW 180

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++  +CE GA+ A A     +    FG NLGI FQ+ DD LD
Sbjct: 181 MLRASCELGALAAQAPDEAVQAAAGFGLNLGIAFQIVDDALD 222


>gi|307105639|gb|EFN53887.1| hypothetical protein CHLNCDRAFT_58364 [Chlorella variabilis]
          Length = 634

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 83/159 (52%), Gaps = 14/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D    RRGK +++  +    AI+AG+ LL  A   +++
Sbjct: 194 RIAEITELIHVASLLHDDV--IDAAGTRRGKKSLNALFGNKVAILAGDFLLARASVSLAA 251

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKM-KTGALMC 190
            +     N  + L++S +    L+ ++ G++L +  +  +   +  +M +   KT +LM 
Sbjct: 252 LR-----NPEAILLMSQS----LEHLVAGEILQLTADVEEAASMDHYMRKTYCKTASLMA 302

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +C + A++      +      +G ++G+ FQL DD++D
Sbjct: 303 NSCRAVAVLGGHGAGDCGAAAEYGRHVGLAFQLVDDVMD 341


>gi|21219102|ref|NP_624881.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|14716951|emb|CAC44181.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)]
          Length = 357

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 23/201 (11%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +L GGK++R  L+ E A L     +  L   A +IE +  + L+HDDL  +D+   RRG 
Sbjct: 51  SLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGG 108

Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           PT +  Y E             ++AG+  L  +  ++   + +L   +R Q M+ +    
Sbjct: 109 PTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLL--EAELPVAVR-QAMVEVQTRA 165

Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQN--EKE 208
                + GQ+ D++ +F     D   +  +   KT      A     ++A  ++    ++
Sbjct: 166 ATDTFV-GQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPGAHED 224

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            LR +   +GI  Q+ DD LD
Sbjct: 225 ELRRYARLVGICGQMRDDWLD 245


>gi|120402584|ref|YP_952413.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119955402|gb|ABM12407.1| Polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 1155

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 50/214 (23%)

Query: 47   LLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            L GGK +RS   +L   C    +     ALR  A++E +H ++LI DD+  MD+  +RR 
Sbjct: 849  LDGGKYVRSTYMYLGWLCGEREDT---AALRASASLELLHTFALIQDDV--MDSSPMRRA 903

Query: 104  KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLK-------- 139
            +P+ H+                ++ E  AI+ G+  L +A E++                
Sbjct: 904  RPSAHVALGRWHRDRALSGSASRFGESAAILLGDLCLVWAEEMLRRSGVDADALARVWPR 963

Query: 140  -DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF-ACE 194
             D +R++L +             GQ+ D+ +    F    +V  + + K+G        E
Sbjct: 964  YDAMRTELAI-------------GQLSDLLNSCQTFPTLPEVLDVLRRKSGNYTVRRPLE 1010

Query: 195  SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             GA MA  S +  + L  +G  +G  FQL DD+L
Sbjct: 1011 LGAAMAGCSADVADALSGYGAAIGEAFQLRDDIL 1044


>gi|254392179|ref|ZP_05007366.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326444821|ref|ZP_08219555.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705853|gb|EDY51665.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 362

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 56/257 (21%)

Query: 9   LQENSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---S 63
           L  N + ++T L+  L+  Q A+       + + +   +   GGK++R  L   C     
Sbjct: 14  LLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCI-CGWYAG 72

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH---------IQYDEV 114
               +    ++  A++E  H ++LIHDDL  MD+   RRGKPTVH         ++  E 
Sbjct: 73  GGAGDMAAVVQAAASLEMFHAFALIHDDL--MDHSDTRRGKPTVHRSLAAHHSALRGQEA 130

Query: 115 T-------AIIAGNGLLTYAFEIISSPK---------TQLKDNIRSQLMLSLTHNIGLQG 158
                   AI+ G+  L ++ E++ +             + D +R+++M           
Sbjct: 131 ASHLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMY---------- 180

Query: 159 MLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLR 211
              GQ LD+    D  +D      + + KT     + CE     GA +A A     E   
Sbjct: 181 ---GQYLDLCAAGDPTLDLDAALTVARYKTAK---YTCERPLHIGASLAGAGLAVLEACT 234

Query: 212 CFGENLGIIFQLADDLL 228
            +   LG  FQL DDLL
Sbjct: 235 AYALPLGEAFQLRDDLL 251


>gi|296166038|ref|ZP_06848487.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898603|gb|EFG78160.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 349

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 26/166 (15%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTY 126
           H  +L+HDD+  +D+   RRG+PT H+++ ++                 AI+ G+  L++
Sbjct: 77  HACALVHDDV--IDDSATRRGRPTTHVRFADLHRARRWRGSPERFGMSAAILLGDLALSW 134

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A +I+   +       R Q + +         +LGGQ LDI  E      +     + T 
Sbjct: 135 ADDIVFRAELSPGAARRVQRVWAEIRT----EVLGGQYLDIVAEASGAESIASAMNVDTY 190

Query: 187 ALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              C+        GA  A    + ++    FG ++G+ FQL DD+L
Sbjct: 191 KTACYTVSRPLQLGAAAAADRPDVQDVFGRFGTDIGVAFQLRDDVL 236


>gi|156937132|ref|YP_001434928.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566116|gb|ABU81521.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 271

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 26/222 (11%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           ID  L++L+  T       + +R+++  +Y + GGK++R  LV         N   AL  
Sbjct: 15  IDKELEELIKNT-------YEERVINVAKYIVNGGKRLRGALVMLVNEALGGNPEDALPA 67

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-P 134
             A+E +H  SL  DD+  +D  ++RRG+P+  +       ++  N L+ +A  ++    
Sbjct: 68  ALALELVHASSLSIDDIIDLD--FVRRGRPSAWVAKGVANTVMVSNLLIPHAIMLVKRYG 125

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           K  +   +     +S      + G   G+ ++  +  I+          KT ++   +  
Sbjct: 126 KRAIDKVVEVWWEVSKGEVWDVHGPPEGKGVEAYEAIIE---------AKTASMFALSAY 176

Query: 195 SGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEED 233
            G + A     E+ERL     +G  LG  +Q+ADDL D E D
Sbjct: 177 LGGLAA----GEEERLEGLWRYGFLLGKAYQIADDLKDVEGD 214


>gi|297159283|gb|ADI08995.1| putative polyprenyl diphosphate synthase [Streptomyces
           bingchenggensis BCW-1]
          Length = 380

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 23/191 (12%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           G K++R  LV   A   + +    +     +E  H  +L HDD+  +D+   RR  P   
Sbjct: 53  GAKRLRPLLVLLAARFGDPDAPGVVPSAVVVELTHLATLYHDDV--LDDADARRRTPATD 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIIS--SPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQM 164
             +D   A++ G+ L   A  +++   P+      D  R Q+               GQ+
Sbjct: 111 ANWDNSVAVLTGDFLFARASHLLADLGPEAVRIQADAFRQQVT--------------GQI 156

Query: 165 LDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           L+      D   +     +   + G+L+  +   GA+ + A +     L  +GE LG+  
Sbjct: 157 LETAGPSGDRDPIEHYLEVLAGRAGSLIAVSGRLGALASGAGREVAGVLARYGERLGVAC 216

Query: 222 QLADDLLDCEE 232
           +LA+D+LD  E
Sbjct: 217 RLAEDVLDIAE 227


>gi|168020145|ref|XP_001762604.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686337|gb|EDQ72727.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 340

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 18/160 (11%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-HIQYDEVTAIIAGNGLLTYAFEIIS 132
           R+   IE IH  SL+HDD+  +D+   RRG  ++ H   ++V A I    LL  A   +S
Sbjct: 85  RIAEIIEMIHVASLLHDDV--LDHADTRRGISSLNHAMGNKVCAAI---FLLARASVTLS 139

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALM 189
           S +      + SQ+         L+ ++ G+++ +  E+ + +   +I      KT +LM
Sbjct: 140 SLRNTQVVELLSQV---------LEHLVTGEIMQLSSEYKNMSNFDVISWKTFYKTASLM 190

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +C+S A++A   +    R   +G +LG+ +QL DD L+
Sbjct: 191 ANSCKSIAVLAGQPEEVANRAFDYGRHLGLAYQLVDDALN 230


>gi|281412693|ref|YP_003346772.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
 gi|281373796|gb|ADA67358.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
          Length = 299

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFYTVEEIGN 125

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
              D +R   +     N+ ++ M   ++++    +  I + +  +I + K+GAL   A +
Sbjct: 126 ---DRLRRTFL-----NV-IRRMSEAELIEQLSRYKPITKEEYLLIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A+         E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALFEGEL---GEDLYNLGVTIGTIYQMFDDIMD 208


>gi|311113328|ref|YP_003984550.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC
           17931]
 gi|310944822|gb|ADP41116.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC
           17931]
          Length = 380

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 62/275 (22%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIR---S 55
           ++ G+ S+ +   + ++  + +   Q  + +    +D L  L AI     GGK++R   S
Sbjct: 10  LSDGVKSEQEAYLRAVEATMSEFFAQQRTLLTAISHDALPLLEAIESLSSGGKRLRALLS 69

Query: 56  FLVTECASLFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
           +     A   ++   +A    +R GAA+E     +LIHDD+  +D    RRGKP+VH ++
Sbjct: 70  YWGWRGAGGDSILEGSAPAPIIRAGAALELFQSAALIHDDI--IDRSDTRRGKPSVHKKF 127

Query: 112 DE----------------VTAIIAGNGLLTYAFEIISS------PKTQLK---DNIRSQL 146
           +                    IIAG+  L+++ ++ SS        T+ +   D +R+++
Sbjct: 128 ETQHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARNIFDTMRTEV 187

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACE-----SGA 197
           M              GQ LD+  E I     E  +    ++       ++CE      GA
Sbjct: 188 M-------------AGQYLDVLSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGA 234

Query: 198 I----MAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    +AH       + R FG  LG  FQL DD L
Sbjct: 235 LALTAIAHQDHPILGKYRAFGLPLGEGFQLRDDEL 269


>gi|290891441|ref|ZP_06554500.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429]
 gi|290478883|gb|EFD87548.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429]
          Length = 335

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 43/223 (19%)

Query: 26  QTASHMQTQHNDRLLSAI------RYALLGGKKIRS----FLVTECASLFNVNHLTALRV 75
           Q  + +  Q+N +++ A+      RY L   +K       F + +CA             
Sbjct: 33  QEKTEVLIQNNGKMIRALITILFGRYTLTVNQKNYDQETIFSIDQCA------------- 79

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AAIE +H  +L+HDD+  +DN   RRG  T+   +     I  G+ L T  F +++S  
Sbjct: 80  -AAIELLHLATLVHDDV--IDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTS-- 134

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192
                 +         H+  ++ +L G+++    +F  +T   + +   K KT  L   +
Sbjct: 135 ------LAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS 188

Query: 193 CESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLD 229
             SG  +   ++       E +    FG NLG+ FQ+ DDL D
Sbjct: 189 AVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKD 231


>gi|227487152|ref|ZP_03917468.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227541680|ref|ZP_03971729.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227092810|gb|EEI28122.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227182648|gb|EEI63620.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 340

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 18/213 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGAA 78
           +++LL +  +H +   N+++   I  A  GGK+ R       + L    +    ++    
Sbjct: 35  VEELLQKELNHGEDFVNEKV---IHLAAAGGKRFRPMFAVLASQLGTRASCEDVIKAATV 91

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E  H  +L HDD+  MD    RRG  + + ++    AI+AG+ LL +A        ++L
Sbjct: 92  VEMTHLATLYHDDV--MDEADRRRGVESANARWGNSVAILAGDILLAHA--------SRL 141

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFM-IQKMKTGALMCFACESG 196
              + +  +       G   ++ GQM + +     D+ + ++ +   KTG L+  A   G
Sbjct: 142 MATLGTDTVAHFAQTFG--DLVTGQMRETVGPGDGDKIEHYLNVVHEKTGVLISSAGYLG 199

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A+    S      L+ FG  +G IFQ+ DD++D
Sbjct: 200 ALHGGCSPEITRALQQFGVYIGTIFQIVDDIID 232


>gi|54298645|ref|YP_125014.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris]
 gi|53752430|emb|CAH13862.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris]
          Length = 322

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166
             +    +++ G+ L T +  ++   +  +K+      +L+L  N   Q   G   Q+ +
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +  +     F + + KT  L   A   G I+ +A    ++ L  +G +LG  FQL DD
Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRDSLYNYGLHLGNAFQLIDD 212

Query: 227 LLD 229
            LD
Sbjct: 213 ALD 215


>gi|255513726|gb|EET89991.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 383

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 16/189 (8%)

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           R  L+   A +++      L + AA++    + LIHDD+   D   +RRG PT+H  Y  
Sbjct: 88  RPMLLMLTALMYDNQDPATLLLAAAVQLSQEWILIHDDIE--DKSEMRRGMPTLHKLYGS 145

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL---MLSLTHNIG------LQGMLGGQM 164
             A+  G+ L +  + +           IR +L    + + ++        L  M G   
Sbjct: 146 SAALHIGDVLHSVMWNMFIDYLGVANPEIRERLYNKFIEVAYSTASGQFQELNFMYGKDG 205

Query: 165 LDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           L        E+  F I   KT +  M    + GAI A   +N  E+L   GEN GI FQ+
Sbjct: 206 L----RSAKESTYFEIASGKTSSYSMRGPLQLGAISAGQDENIVEKLGAIGENAGIAFQI 261

Query: 224 ADDLLDCEE 232
            DD++D ++
Sbjct: 262 NDDIIDMQK 270


>gi|237785329|ref|YP_002906034.1| putative polyprenyl diphosphate synthase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758241|gb|ACR17491.1| putative polyprenyl diphosphate synthase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 361

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 45/260 (17%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIR-YALLGGKKIR------- 54
           +P  + +  + +   L++  ++  S M+  +   D  ++A+  + + GGK+IR       
Sbjct: 1   MPRSVDDVPRCVVAHLNEFFMERQSAMKAISPVADEAMAALTDFTINGGKRIRPTFAWLG 60

Query: 55  ---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ- 110
              S  +T   +  + +    +   +++E +   +LIHDD+  +D+   RRG PTVH   
Sbjct: 61  WMGSLQLTFSDAAEHPDADAVMHAASSLELLQSCALIHDDI--IDSSATRRGMPTVHEHF 118

Query: 111 ---------------YDEVTAIIAGNGLLTYA---FEIISSPKTQLKDNIRSQLMLSLTH 152
                          Y    AI+ G+  L++A   F   + P  Q +D          T 
Sbjct: 119 KQSHSAQAWHGRGESYGNAVAILIGDLALSWADDMFMEAALPPAQ-RDRAWQPWQDMRTE 177

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKE 208
                 ++ GQ++D+  E   +  +   +++       +  E     GA +A A Q+   
Sbjct: 178 ------VVCGQIMDVTAEAQGDGSLRTAERVNRYKTAAYTVERPLHIGAALAGAPQDTVT 231

Query: 209 RLRCFGENLGIIFQLADDLL 228
            LR FG ++G+ FQL DD L
Sbjct: 232 ALRTFGRDIGVAFQLRDDQL 251


>gi|296108301|ref|YP_003620002.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila
           2300/99 Alcoy]
 gi|295650203|gb|ADG26050.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila
           2300/99 Alcoy]
          Length = 322

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166
             +    +++ G+ L T +  ++   +  +K+      +L+L  N   Q   G   Q+ +
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +  +     F + + KT  L   A   G I+ +A    ++ L  +G +LG  FQL DD
Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRDSLYNYGLHLGNAFQLIDD 212

Query: 227 LLD 229
            LD
Sbjct: 213 ALD 215


>gi|255530459|ref|YP_003090831.1| trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366]
 gi|255343443|gb|ACU02769.1| Trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366]
          Length = 323

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 14/177 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V   A L      +  R  A +E +H  +L+HDD+  +DN Y RRG  +++ 
Sbjct: 45  GKQVRPMFVFFAAKLCGGIIESTHRGAALVELLHTATLVHDDV--VDNAYERRGFFSINA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL     ++S   ++ +       +L +     ++ M  G++L I+ 
Sbjct: 103 LWKNKIAVLVGDYLLAKGL-LLSVHNSEFR-------LLQIVSE-AVKQMSEGELLQIEK 153

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                I E   F + + KT +L+   C  GA  A A +   E++R FGE +GI FQ+
Sbjct: 154 VRRMDISEELYFDVIRQKTASLIASCCACGAASAGADEATIEKMRLFGEKVGIAFQI 210


>gi|296395152|ref|YP_003660036.1| trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985]
 gi|296182299|gb|ADG99205.1| Trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985]
          Length = 352

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 18/154 (11%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  +L HDD+  MD   +RRG P  ++++    AI+AG+ L   A  +I+         
Sbjct: 99  IHLATLYHDDV--MDEATMRRGVPAANVRWGNQVAILAGDYLFARACGLIA--------Q 148

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFACES 195
           + S+    + H      ++ GQ  D+     D+     I+        KT +L+      
Sbjct: 149 LGSEATAIVAHT--FAELVTGQFRDVVGAGADQGNAAKIEHYLATIHGKTASLIGACGRL 206

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +   A Q+ ++RL   G   G+ FQ+ADD++D
Sbjct: 207 AGLAVRADQDVQDRLASIGVLTGMAFQIADDIID 240


>gi|76788536|ref|YP_330346.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           A909]
 gi|76563593|gb|ABA46177.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           A909]
          Length = 326

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 22/194 (11%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R    +L ++  +  N +     ++ A++E +H  +LIHDD+  +D+  +RRG  
Sbjct: 44  GGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNM 101

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++ +  A+   + L T  F++I      L+    +  M    +   ++ +L G++ 
Sbjct: 102 TIQSKFGKDIAVYTRDLLFTVFFDLI------LESMADTPFMT--INAKSMRKILMGELD 153

Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGI 219
            +   +  +  +    +    KT  L   A + GA    A   EKE +R  G    N+G+
Sbjct: 154 QMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGA---EKEVVRLAGHIGFNIGM 210

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD+LD   D
Sbjct: 211 TFQILDDILDYTAD 224


>gi|325830170|ref|ZP_08163627.1| polyprenyl synthetase [Eggerthella sp. HGA1]
 gi|325487637|gb|EGC90075.1| polyprenyl synthetase [Eggerthella sp. HGA1]
          Length = 349

 Score = 55.5 bits (132), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 11/193 (5%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           I Y+  GGK+ R  +          +   A    AAIE  H  +LIHDD+   D   +RR
Sbjct: 54  ISYSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDDIA--DEAELRR 111

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+P +H+      AI AG+  L+     + S K+ L D  + +++  L      +  + G
Sbjct: 112 GEPCMHLTEGMGLAINAGDLALSLVNGTVVSDKS-LDDATKVRVITELIDMT--RRTIEG 168

Query: 163 QMLDI---QDEFIDET-QVFMIQKMKTGALMCFACE--SGAIMAHASQNEKERLRCFGEN 216
           Q LDI   +D   D T + +++      A    A     GAI+   ++ E E LR +G +
Sbjct: 169 QALDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEIEIEALRNYGLD 228

Query: 217 LGIIFQLADDLLD 229
            G+ FQ+ DDLL+
Sbjct: 229 TGLAFQIQDDLLN 241


>gi|318059311|ref|ZP_07978034.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces sp.
           SA3_actG]
          Length = 370

 Score = 55.5 bits (132), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 34/211 (16%)

Query: 49  GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GG+++RS  V       C +        AL VGAA+E +   +L+ DD+  MDN  +RRG
Sbjct: 59  GGRRLRSAFVWWGLRVACPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRG 116

Query: 104 KPTVHI---------------QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146
           +P +H+                + +  A++AG+  + +A +  +   P  ++   +R   
Sbjct: 117 QPALHVLLGSTRPAAAGPGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLW 176

Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +  T       M+ GQ LD+    D     T       +K+G            +  A+
Sbjct: 177 SVLRTE------MIAGQYLDLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAA 230

Query: 204 QNEKER-LRCFGENLGIIFQLADDLLDCEED 233
             E  R LR  G   G+ FQL DDLL    D
Sbjct: 231 PPEVCRVLRAAGGAAGLAFQLRDDLLAVWGD 261


>gi|114769799|ref|ZP_01447409.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha
           proteobacterium HTCC2255]
 gi|114549504|gb|EAU52386.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha
           proteobacterium HTCC2255]
          Length = 335

 Score = 55.5 bits (132), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 2/83 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R+ +  + ASL  ++  T+L   AA+E +H  SLIHDD+   D    RRG+ ++ +
Sbjct: 56  GKMLRAKMAIQSASLAEIDISTSLLWAAAVEVLHNASLIHDDI--CDGDKQRRGRESIWV 113

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS 132
           ++   TA+  G+ L+  +FE+ S
Sbjct: 114 KFGRDTALTLGDWLIALSFELAS 136


>gi|118587470|ref|ZP_01544895.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni
           ATCC BAA-1163]
 gi|118432120|gb|EAV38861.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni
           ATCC BAA-1163]
          Length = 335

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 19/163 (11%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AAIE +H  +L+HDD+  +DN   RRG  T+   +     I  G+ L T  F +++S  
Sbjct: 79  AAAIELLHLATLVHDDV--IDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTS-- 134

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192
                 +         H+  ++ +L G+++    +F  +T   + +   K KT  L   +
Sbjct: 135 ------LAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS 188

Query: 193 CESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLD 229
             SG  +   ++       E +    FG NLG+ FQ+ DDL D
Sbjct: 189 AVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKD 231


>gi|46199593|ref|YP_005260.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27]
 gi|46197219|gb|AAS81633.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27]
          Length = 312

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + L+   +R +  L +L+      ++  H D L++A      GGK+IR  LV   +    
Sbjct: 2   TDLEAPLRRFEEALSELVQSDVLFIRLIHQD-LVTA------GGKRIRPRLVFLASRALG 54

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   +  A+E +H  +L+HDDL  +D+   RRGK     +Y    ++++G+ LL+ 
Sbjct: 55  GAPFELE-LALAVELLHSATLLHDDL--IDDAETRRGKEAAFRKYGNAVSVLSGDFLLSR 111

Query: 127 AFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
              +I+ + + +L +   +++  +L+    LQ     Q+  ++D  ++  +   I   KT
Sbjct: 112 LLHVIAKTGRMELVERF-AEVAKTLSEGEVLQF----QVAALEDYSLENYE--RIITAKT 164

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             LM  A E  A++  A    +E L  +G   G  FQ+ DD LD 
Sbjct: 165 AVLMALATEGPALLLGAESRVREALYRYGLLYGQAFQMRDDYLDL 209


>gi|256789881|ref|ZP_05528312.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289773764|ref|ZP_06533142.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289703963|gb|EFD71392.1| polyprenyl synthetase [Streptomyces lividans TK24]
          Length = 357

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 23/201 (11%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +L GGK++R  L+ E A L     +  L   A +IE +  + L+HDDL  +D+   RRG 
Sbjct: 51  SLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGG 108

Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           PT +  Y E             ++AG+  L  +  ++     +L   +R Q M+ +    
Sbjct: 109 PTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLLD--AELPVAVR-QAMVEVQTRA 165

Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQN--EKE 208
                + GQ+ D++ +F     D   +  +   KT      A     ++A  ++    ++
Sbjct: 166 ATDTFV-GQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPGAHED 224

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            LR +   +GI  Q+ DD LD
Sbjct: 225 ELRRYARLVGICGQMRDDWLD 245


>gi|300780819|ref|ZP_07090673.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030]
 gi|300532526|gb|EFK53587.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030]
          Length = 368

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 48/218 (22%)

Query: 45  YALLGGKKIRS------FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR       F+          +    L   +++E I   +LIHDD+  +D  
Sbjct: 52  FVLGGGKRIRPTFGWVGFVGANGLENTEEDPAAVLCAVSSLEFIQACALIHDDI--IDAS 109

Query: 99  YIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH+                ++ E  AI+ G+  L +A            D++
Sbjct: 110 ATRRGNPTVHVAAAHSHREHNWLGDSDKFGESLAILVGDLALVWA------------DDM 157

Query: 143 RSQLMLS----LTHNIGLQGM----LGGQMLDIQDEFI---DETQVFMIQKMKTGALMC- 190
                LS    L  +   +GM    +GGQ+LDI  E      E     + + KT A    
Sbjct: 158 WHHSGLSHAALLRASEPWRGMRTEVIGGQILDISLEAAGCESEELANAVNRFKTAAYTIE 217

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                GA +A A  +    LR +G ++GI FQL DD+L
Sbjct: 218 RPLHLGAAIAGADDDTIAALRRYGHDIGIAFQLRDDIL 255


>gi|15644283|ref|NP_229335.1| octoprenyl-diphosphate synthase, putative [Thermotoga maritima
           MSB8]
 gi|170288987|ref|YP_001739225.1| polyprenyl synthetase [Thermotoga sp. RQ2]
 gi|46015919|pdb|1V4E|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima
 gi|46015920|pdb|1V4E|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima
 gi|4982102|gb|AAD36602.1|AE001800_12 octoprenyl-diphosphate synthase, putative [Thermotoga maritima
           MSB8]
 gi|170176490|gb|ACB09542.1| Polyprenyl synthetase [Thermotoga sp. RQ2]
          Length = 299

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|255326216|ref|ZP_05367302.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296]
 gi|255296670|gb|EET76001.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296]
          Length = 410

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 93/248 (37%), Gaps = 78/248 (31%)

Query: 39  LLSAIRYALLGGKKIRSFL------------VTECASLFNVNHLTALRVGAAIECIHCYS 86
           LL AI     GGK++R+ L            VTE     N    + ++ G A+E     +
Sbjct: 72  LLEAIESLSTGGKRLRALLSYWGWRGAGGAPVTE-----NRTSWSIVKAGMAVELFQTSA 126

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEI 130
           LIHDD+  +D    RRG P+VH +++                    I+AG+  + ++ E+
Sbjct: 127 LIHDDI--IDRSDTRRGAPSVHKRFEAAHEQNSWRGDAFNYGLTGGILAGDLTMAWSAEV 184

Query: 131 ISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET------ 175
            +S         P   + D +R+++             L GQ LD+  E ++        
Sbjct: 185 FASLGEGAIYGAPARTIFDRMRTEV-------------LAGQYLDVYSEVLETEDAQAAL 231

Query: 176 -QVFMIQKMKTG--------------ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            +   + + K+               AL     ESGA             R FG  LG  
Sbjct: 232 QRALNVIRFKSAKYSCEHPFTIGGALALQAAVLESGASAVSEQHPVLAGYRAFGLPLGEG 291

Query: 221 FQLADDLL 228
           FQL DD L
Sbjct: 292 FQLRDDEL 299


>gi|46015921|pdb|1V4H|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima F52a Mutant
          Length = 299

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|156405854|ref|XP_001640946.1| predicted protein [Nematostella vectensis]
 gi|156228083|gb|EDO48883.1| predicted protein [Nematostella vectensis]
          Length = 427

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 32/162 (19%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SLIHDD+  +D    RRGK  +++ Y +   I+AG+ +L+              
Sbjct: 182 EMIHTASLIHDDV--IDRADTRRGKVAINLMYGDKNCILAGDYILS-------------- 225

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFI--------DETQVFMIQKM--KTGA 187
              R  L ++   N+    +L  +++D  ++ EF+        DE     ++K   KT +
Sbjct: 226 ---RVSLAIARFGNVEAVKLLA-EIVDELVRGEFMQLGSKENPDERFTHYLKKTYKKTAS 281

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+   C++  ++  +  + ++    +G N+GI FQL DD+LD
Sbjct: 282 LIACCCKTAVLLGDSPPDIQDIAFQYGRNVGIAFQLVDDVLD 323


>gi|71041841|pdb|1WKZ|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima K41a Mutant
 gi|71041842|pdb|1WKZ|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima K41a Mutant
          Length = 299

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGEL---GEDLYNLGVTIGTIYQMFDDIMD 208


>gi|227495997|ref|ZP_03926308.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM
           15434]
 gi|226834485|gb|EEH66868.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM
           15434]
          Length = 405

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 110/270 (40%), Gaps = 50/270 (18%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND------RLLSAIRYALLGGKKIRSFLVTE 60
           S L + ++ +   +D  L Q     + ++ D       LL A    L GGK++R+ L   
Sbjct: 24  SDLSDTARLVRAGVDARLAQVLQERRARYEDLGEAATELLDAAEVLLKGGKRMRALLAGL 83

Query: 61  CASLFNVNHL-TAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
             +L +     TAL         GAA+E     +L+HDD+  +D    RRG+P  H +  
Sbjct: 84  GIALDSHGPARTALLSSPLVASAGAALELYQASALVHDDV--IDAALTRRGEPAAHRRLA 141

Query: 113 EV----------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +V                 AI+ G+ LL+   E +    T++  +  +        +   
Sbjct: 142 QVHRDHGWLTEPLTFGTSGAILLGDLLLSACGEEMGHAVTEVGVSPAAATAARQAFDRMT 201

Query: 157 QGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCFACES-----------GAIMA 200
             +  GQ LD++ E +     +E  V   Q M   AL     +S           GA++A
Sbjct: 202 SEVAVGQYLDLRSEVVPLPGPEENPVEAGQTMHRNALGVVRRKSARYSVMYPLLIGALLA 261

Query: 201 HASQN--EKERLRCFGENLGIIFQLADDLL 228
               +     RL  FGE +GI FQL DDLL
Sbjct: 262 GVDPDCALAARLAQFGEEVGIAFQLRDDLL 291


>gi|55981624|ref|YP_144921.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8]
 gi|55773037|dbj|BAD71478.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8]
          Length = 312

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + L+   +R +  L +L+      ++  H D L++A      GGK+IR  LV   +    
Sbjct: 2   TDLEAPLRRFEEALSELVQSDVLFIRLIHQD-LVTA------GGKRIRPRLVFLASRALG 54

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   +  A+E +H  +L+HDDL  +D+   RRGK     +Y    ++++G+ LL+ 
Sbjct: 55  GAPFELE-LALAVELLHSATLLHDDL--IDDAETRRGKEAAFRKYGNAVSVLSGDFLLSR 111

Query: 127 AFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
              +I+ + + +L +   +++  +L+    LQ     Q+  ++D  ++  +   I   KT
Sbjct: 112 LLHVIAKTGRMELVERF-AEVAKTLSEGEVLQF----QVAALEDYSLENYE--RIITAKT 164

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             LM  A E  A++  A    +E L  +G   G  FQ+ DD LD 
Sbjct: 165 AVLMALATEGPALLLGAESGVREALYRYGLLYGQAFQMRDDYLDL 209


>gi|116491791|ref|YP_811335.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
 gi|116092516|gb|ABJ57670.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
          Length = 335

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 19/163 (11%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AAIE +H  +L+HDD+  +DN   RRG  T+   +     I  G+ L T  F +++S  
Sbjct: 79  AAAIELLHLATLVHDDV--IDNAEKRRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTS-- 134

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192
                 +         H+  ++ +L G+++    +F  +T   + +   K KT  L   +
Sbjct: 135 ------LAPSKEFIAYHSSAMEKVLTGELIQDALKFHKQTTLAEYYQAIKGKTATLFSLS 188

Query: 193 CESGAIMAHASQN------EKERLRCFGENLGIIFQLADDLLD 229
             SG  +   ++       E +    FG NLG+ FQ+ DDL D
Sbjct: 189 AVSGVWLGKKNKQFDEDNLEFKNAFNFGYNLGMAFQMLDDLKD 231


>gi|254551210|ref|ZP_05141657.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
          Length = 352

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 61/243 (25%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--------VGA 77
           + A+HM + ++  +     + L GGK++R          +   H  A R        + +
Sbjct: 18  RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFA------YWGWHTVASREPDPDVLLLFS 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGN 121
           A+E +H ++L+HDDL  +D    RRG+PT  ++Y  +                 AI+ G+
Sbjct: 72  ALELLHAWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD 129

Query: 122 GLLTYAFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
               +A +I+S       +P  Q +      +IR+++             LGGQ LDI  
Sbjct: 130 LAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEV-------------LGGQYLDIVA 176

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLAD 225
           E      +     + T    C+       +  A+  ++  +      FG +LG+ FQL D
Sbjct: 177 EASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRD 236

Query: 226 DLL 228
           D+L
Sbjct: 237 DVL 239


>gi|260205469|ref|ZP_05772960.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis K85]
 gi|289574857|ref|ZP_06455084.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis K85]
 gi|289539288|gb|EFD43866.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis K85]
          Length = 352

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 61/243 (25%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--------VGA 77
           + A+HM + ++  +     + L GGK++R          +   H  A R        + +
Sbjct: 18  RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFA------YWGWHAVASREPDPDVLLLFS 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGN 121
           A+E +H ++L+HDDL  +D    RRG+PT  ++Y  +                 AI+ G+
Sbjct: 72  ALELLHAWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD 129

Query: 122 GLLTYAFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
               +A +I+S       +P  Q +      +IR+++             LGGQ LDI  
Sbjct: 130 LAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEV-------------LGGQYLDIVA 176

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLAD 225
           E      +     + T    C+       +  A+  ++  +      FG +LG+ FQL D
Sbjct: 177 EASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRD 236

Query: 226 DLL 228
           D+L
Sbjct: 237 DVL 239


>gi|172040899|ref|YP_001800613.1| putative polyprenyl diphosphate synthase [Corynebacterium
           urealyticum DSM 7109]
 gi|171852203|emb|CAQ05179.1| putative polyprenyl diphosphate synthase [Corynebacterium
           urealyticum DSM 7109]
          Length = 394

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 51/264 (19%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTA---SHMQTQHNDRLLSAIRYALLGGKKIRSFLV--- 58
           L + L++    +D  LD     +A   S +  + ND +     + + GGK++R       
Sbjct: 27  LRAPLKDVPAAVDRALDAYFDHSAAEFSAIAPEFNDAMAVLRGFVMGGGKRVRPTFAWAG 86

Query: 59  ---------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                     + +S+ +V+  + L   +A+E +   +LIHDD+  +D    RRG PT H 
Sbjct: 87  FRAGLEGGGADGSSIQDVDPASVLLALSALEFVQACALIHDDI--IDESDTRRGNPTTHR 144

Query: 110 QYDE----------------VTAIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLT 151
            ++                   AI+AG+  L++A +++++      + D +R       T
Sbjct: 145 VFESQHRERGWFGSSEHYGISQAILAGDLALSWADDLLATAGLSPSIVDRVRGPWRAMRT 204

Query: 152 HNIGLQGMLGGQMLDI------QDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQ 204
                  +L GQ LDI       +   D  QV      KT +  +      GA +A A +
Sbjct: 205 E------VLAGQQLDIALENNGSESIADAMQVI---NFKTASYTVARPLHIGAALAGADE 255

Query: 205 NEKERLRCFGENLGIIFQLADDLL 228
              E L  +G  +G  FQL DD L
Sbjct: 256 RTIELLLEYGTLVGQAFQLRDDQL 279


>gi|71041843|pdb|1WL0|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R44a Mutant
 gi|71041844|pdb|1WL0|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R44a Mutant
          Length = 299

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|305681416|ref|ZP_07404223.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
 gi|305659621|gb|EFM49121.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
          Length = 362

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 93/214 (43%), Gaps = 40/214 (18%)

Query: 45  YALLGGKKIRSFLV----TECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNG 98
           Y L GGK+IR   V         L N     A  LR  +A+E I   +LIHDD+  +D+ 
Sbjct: 49  YVLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDI--IDSS 106

Query: 99  YIRRGKPTVH----IQYDE------------VTAIIAGNGLLTYAFEIISSPKTQLK--D 140
             RRG PTVH     +++E              AI+ G+    +A +++ +        D
Sbjct: 107 DTRRGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAALD 166

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC-FACE 194
            I+       T       ++GGQ+LDI      DE I   QV  + + KT A        
Sbjct: 167 RIQPAWRGMRTE------VIGGQLLDIIHEASGDEDIATAQV--VNRFKTAAYTIERPLH 218

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +A A       LR +G ++G+ FQL DD L
Sbjct: 219 LGAALAGADAATIAALRAYGTDIGVAFQLRDDQL 252


>gi|325969747|ref|YP_004245939.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708950|gb|ADY02437.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 296

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 16/199 (8%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHLT-ALRVGAAIECIHCYSLIHDDLP 93
           DRLL A  + +   GK IR  LV   A +L N   +  A+   A++E IH  SL+ DD+ 
Sbjct: 39  DRLLKATYHYIRNRGKLIRPTLVLLMAYALGNGTGIERAILPAASVELIHTASLLQDDI- 97

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQLKDNIRSQLMLSLT 151
            MD   IRRG  T +  Y   TA++A + ++  A  F I S     + + + S + L++ 
Sbjct: 98  -MDQQRIRRGVETPYSIYGSHTAMLASDLIIAKAVEFAIRSGDNDIVFELLNSSIKLAVG 156

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210
            +  L+  L G+     D+++       +   KT +L+  +   GA   +   NE   R+
Sbjct: 157 QS--LESELSGRDNTTIDDYLK------LIYYKTASLIESSMIVGAYSVNVKDNEVISRI 208

Query: 211 RCFGENLGIIFQLADDLLD 229
           R  G  +GI FQ+ DD++D
Sbjct: 209 RDIGRFVGIAFQVRDDVID 227


>gi|52842862|ref|YP_096661.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629973|gb|AAU28714.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 322

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166
             +    +++ G+ L T +  ++   +  +K+      +L+L  N   Q   G   Q+ +
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +  +     F + + KT  L   A   G I+ +A    +  L  +G +LG  FQL DD
Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIELRNSLYNYGLHLGNAFQLIDD 212

Query: 227 LLD 229
            LD
Sbjct: 213 ALD 215


>gi|163849265|ref|YP_001637309.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222527256|ref|YP_002571727.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
 gi|163670554|gb|ABY36920.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222451135|gb|ACM55401.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
          Length = 361

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 16/148 (10%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRS 144
           SL+HDDL  +D    RRG+ TVH ++D   A++ G+     A  E+  SP  ++      
Sbjct: 120 SLVHDDL--VDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPRII----- 172

Query: 145 QLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMAH 201
                  +   +Q +  G++  + + + F    + ++ +   KT  L   AC++G +   
Sbjct: 173 -----TFYAEAVQTICEGELSPVTVAEPFDKALRQYLYKTGAKTAVLFEAACKAGMVAGG 227

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
            S  E   L  +G +LG+ FQ+ DD+LD
Sbjct: 228 GSDEEIAALGSYGYDLGMAFQIIDDVLD 255


>gi|332671664|ref|YP_004454672.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
 gi|332340702|gb|AEE47285.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
          Length = 367

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 27/238 (11%)

Query: 11  ENSKRIDT-ILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           E++ R+ T  L DLL++ A     +H D  R+L     + LGGK +R  L          
Sbjct: 24  EDATRLATSTLQDLLVERAVR-AGRHADAARVLWEDLASTLGGKLMRPRLTAAAYLGLGG 82

Query: 68  NHLTALR-VGAAIECIHCYSLIHDDLPSMD---------NGYIRR-----GKPTVHIQYD 112
             L A+  V AA E +H   L+HDD+   D         +G  RR     G P V     
Sbjct: 83  TDLGAVAPVAAAQEVLHVAMLVHDDVLDHDDVRRGRLNVSGAARRRGLTRGLPAVDADAQ 142

Query: 113 EVTA-IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
            + A I+AG+  L  AF +++  +T +  ++R +L   L    G++  + G++LD+  E 
Sbjct: 143 ALAAGILAGDLALASAFRLVA--RTPVPGDVRERLTDLLAD--GVETAVAGELLDVASET 198

Query: 172 IDETQV--FMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +    V   ++  +KT    C     SGA++A A ++   RL      LG+ FQL DD
Sbjct: 199 LAPADVDALLVAALKTAEYSCRVPLASGAVLAGADEDVLRRLDDVAAALGLAFQLTDD 256


>gi|52550292|gb|AAU84141.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
           GZfos37B2]
          Length = 361

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 28/183 (15%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVH-----------------IQYDEVTAIIAGNG 122
           E  H ++L+HDD+  +D   +RRG  TVH                   Y    AI+AG+ 
Sbjct: 79  EVFHTWTLVHDDV--IDRDCMRRGGYTVHEEFRRRGVDLGYDGDKAAHYGTSLAILAGDV 136

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFIDETQV 177
              ++  ++S    +  D      ++ +     +  +L GQ+ D+Q      E + E ++
Sbjct: 137 QQGWSVSLLSELAERGVDPAVVLHLIRMMETDVVIMLLSGQIFDVQYSKAPIESLSEAKI 196

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN-EKERLRC---FGENLGIIFQLADDLLDCEED 233
             +   KTGAL  FA  +GA++  ++ N E E +R    F    G  FQL DD+L    D
Sbjct: 197 LGMLWRKTGALYEFAGAAGAMIGLSTTNRENELVRSISQFTGRCGTAFQLQDDILGVVGD 256

Query: 234 LPK 236
             K
Sbjct: 257 TKK 259


>gi|15609310|ref|NP_216689.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
           H37Rv]
 gi|15841663|ref|NP_336700.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793351|ref|NP_855844.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis
           AF2122/97]
 gi|121638053|ref|YP_978277.1| putative geranylgeranyl pyrophosphate synthetase idsA2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148661989|ref|YP_001283512.1| putative geranylgeranyl pyrophosphate synthetase IdsA2
           [Mycobacterium tuberculosis H37Ra]
 gi|148823380|ref|YP_001288134.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis F11]
 gi|167967239|ref|ZP_02549516.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis H37Ra]
 gi|215403561|ref|ZP_03415742.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 02_1987]
 gi|215411897|ref|ZP_03420671.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215427549|ref|ZP_03425468.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T92]
 gi|215431104|ref|ZP_03429023.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis EAS054]
 gi|215446402|ref|ZP_03433154.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T85]
 gi|218753894|ref|ZP_03532690.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis GM 1503]
 gi|219558151|ref|ZP_03537227.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T17]
 gi|224990547|ref|YP_002645234.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253798764|ref|YP_003031765.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|254232327|ref|ZP_04925654.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis C]
 gi|254364972|ref|ZP_04981018.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260187169|ref|ZP_05764643.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|260201290|ref|ZP_05768781.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T46]
 gi|289443678|ref|ZP_06433422.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T46]
 gi|289447799|ref|ZP_06437543.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289554042|ref|ZP_06443252.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 605]
 gi|289570287|ref|ZP_06450514.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T17]
 gi|289745445|ref|ZP_06504823.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
           02_1987]
 gi|289750767|ref|ZP_06510145.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T92]
 gi|289754281|ref|ZP_06513659.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054]
 gi|289758293|ref|ZP_06517671.1| polyprenyl synthetase [Mycobacterium tuberculosis T85]
 gi|289762332|ref|ZP_06521710.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis GM 1503]
 gi|294993558|ref|ZP_06799249.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 210]
 gi|297634761|ref|ZP_06952541.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 4207]
 gi|297731752|ref|ZP_06960870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN R506]
 gi|298525665|ref|ZP_07013074.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306776423|ref|ZP_07414760.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu001]
 gi|306780200|ref|ZP_07418537.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu002]
 gi|306784947|ref|ZP_07423269.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu003]
 gi|306789314|ref|ZP_07427636.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu004]
 gi|306793640|ref|ZP_07431942.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu005]
 gi|306798031|ref|ZP_07436333.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu006]
 gi|306803911|ref|ZP_07440579.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu008]
 gi|306808482|ref|ZP_07445150.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu007]
 gi|306968308|ref|ZP_07480969.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu009]
 gi|306972535|ref|ZP_07485196.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu010]
 gi|307080242|ref|ZP_07489412.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu011]
 gi|307084831|ref|ZP_07493944.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu012]
 gi|313659086|ref|ZP_07815966.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN V2475]
 gi|2911093|emb|CAA17477.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE)
           (GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|13881916|gb|AAK46514.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31618943|emb|CAD97048.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE)
           (GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE)
           [Mycobacterium bovis AF2122/97]
 gi|121493701|emb|CAL72176.1| Probable geranylgeranyl pyrophosphate synthetase idsA2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124601386|gb|EAY60396.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis C]
 gi|134150486|gb|EBA42531.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148506141|gb|ABQ73950.1| putative geranylgeranyl pyrophosphate synthetase IdsA2
           [Mycobacterium tuberculosis H37Ra]
 gi|148721907|gb|ABR06532.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis F11]
 gi|224773660|dbj|BAH26466.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253320267|gb|ACT24870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|289416597|gb|EFD13837.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T46]
 gi|289420757|gb|EFD17958.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289438674|gb|EFD21167.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 605]
 gi|289544041|gb|EFD47689.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T17]
 gi|289685973|gb|EFD53461.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
           02_1987]
 gi|289691354|gb|EFD58783.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T92]
 gi|289694868|gb|EFD62297.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054]
 gi|289709838|gb|EFD73854.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis GM 1503]
 gi|289713857|gb|EFD77869.1| polyprenyl synthetase [Mycobacterium tuberculosis T85]
 gi|298495459|gb|EFI30753.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308215160|gb|EFO74559.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu001]
 gi|308326915|gb|EFP15766.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu002]
 gi|308330351|gb|EFP19202.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu003]
 gi|308334184|gb|EFP23035.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu004]
 gi|308337984|gb|EFP26835.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu005]
 gi|308341669|gb|EFP30520.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu006]
 gi|308345161|gb|EFP34012.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu007]
 gi|308349463|gb|EFP38314.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu008]
 gi|308354094|gb|EFP42945.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu009]
 gi|308358037|gb|EFP46888.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu010]
 gi|308361973|gb|EFP50824.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu011]
 gi|308365602|gb|EFP54453.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu012]
 gi|323719268|gb|EGB28412.1| geranylgeranyl pyrophosphate synthetase id [Mycobacterium
           tuberculosis CDC1551A]
 gi|326903788|gb|EGE50721.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis W-148]
 gi|328458527|gb|AEB03950.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 4207]
          Length = 352

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 61/243 (25%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--------VGA 77
           + A+HM + ++  +     + L GGK++R          +   H  A R        + +
Sbjct: 18  RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFA------YWGWHAVASREPDPDVLLLFS 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGN 121
           A+E +H ++L+HDDL  +D    RRG+PT  ++Y  +                 AI+ G+
Sbjct: 72  ALELLHAWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGD 129

Query: 122 GLLTYAFEIIS-------SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
               +A +I+S       +P  Q +      +IR+++             LGGQ LDI  
Sbjct: 130 LAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEV-------------LGGQYLDIVA 176

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLAD 225
           E      +     + T    C+       +  A+  ++  +      FG +LG+ FQL D
Sbjct: 177 EASAAESIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRD 236

Query: 226 DLL 228
           D+L
Sbjct: 237 DVL 239


>gi|307611532|emb|CBX01209.1| hypothetical protein LPW_29081 [Legionella pneumophila 130b]
          Length = 322

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166
             +    +++ G+ L T +  ++   +  +K+      +L+L  N   Q   G   Q+ +
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +  +     F + + KT  L   A   G I+ +A    +  L  +G +LG  FQL DD
Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRNSLYNYGLHLGNAFQLIDD 212

Query: 227 LLD 229
            LD
Sbjct: 213 ALD 215


>gi|54295495|ref|YP_127910.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens]
 gi|148358609|ref|YP_001249816.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str.
           Corby]
 gi|53755327|emb|CAH16823.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens]
 gi|148280382|gb|ABQ54470.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str.
           Corby]
          Length = 322

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLD 166
             +    +++ G+ L T +  ++   +  +K+      +L+L  N   Q   G   Q+ +
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMV--EVGIKE------ILNLLANTSHQITCGEVKQLAN 152

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +  +     F + + KT  L   A   G I+ +A    +  L  +G +LG  FQL DD
Sbjct: 153 RHNPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRNSLYNYGLHLGNAFQLIDD 212

Query: 227 LLD 229
            LD
Sbjct: 213 ALD 215


>gi|325001247|ref|ZP_08122359.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1]
          Length = 383

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 49/244 (20%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRV 75
           D + + +  + A H+ +      L+ +    +G GK +RS            +   AL  
Sbjct: 41  DRVEETVRRRCAEHVHSMEGAEFLAGVLTDFVGRGKYLRSMFGYLGWRAAAPDSPAALDA 100

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIA 119
            A +E +H ++L+ DD+  MD   +RRG+PTVH+Q                + E  A++ 
Sbjct: 101 VAGLELLHAFALLQDDV--MDGSLLRRGRPTVHVQLAAWHRGQGMSGCPDRFGESGAVLL 158

Query: 120 GNGLLTYAFEIISS---PKTQLK------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           G+  L +A + +     P+  L       D +RS+L +             GQ  D+ +E
Sbjct: 159 GDLCLVWAEQAMRESGLPRDALDRGWPRYDAMRSELAV-------------GQFADLLNE 205

Query: 171 F-----IDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                 +DE  V  + + K+G        E GA MA    +    L  +G  +G  FQ+ 
Sbjct: 206 ARRVPTLDE--VMDVLRRKSGNYTVRRPLELGAAMAGGGDDLVALLGDYGTMVGEAFQMR 263

Query: 225 DDLL 228
           DD+L
Sbjct: 264 DDVL 267


>gi|255322657|ref|ZP_05363801.1| prenyl transferase [Campylobacter showae RM3277]
 gi|255300218|gb|EET79491.1| prenyl transferase [Campylobacter showae RM3277]
          Length = 297

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 22/167 (13%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           +L++ A IE IH  SL+HDD+  +D+   RRG P+++  +    A++ G+ L +  F  +
Sbjct: 48  SLKICAIIELIHLASLLHDDV--IDDADTRRGSPSINASFGTKNAVMLGDILYSKGFYEL 105

Query: 132 SSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF--MIQKMKTG 186
           S    ++   I   +  LS+           G+M+D+    +F D+   +  MI   KT 
Sbjct: 106 SKFPYEIAGEISGAVSKLSV-----------GEMMDVDLSAKFNDDKSAYETMIY-YKTA 153

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L+  A   GA++A     +    + +G+NLG+ FQ+ DD+LD  +D
Sbjct: 154 VLIEAAAAVGAMLAGL---DASNFKIYGKNLGLAFQIIDDILDVTQD 197


>gi|294633680|ref|ZP_06712238.1| polyprenyl synthetase [Streptomyces sp. e14]
 gi|292830322|gb|EFF88673.1| polyprenyl synthetase [Streptomyces sp. e14]
          Length = 304

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 26/206 (12%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +L GGK++R  L+ E A L   + +  L   A +IE +  + LIHDD+  +D+  +RRG 
Sbjct: 53  SLRGGKRLRVALLYEAARLVTSDAVAGLEEAALSIELLQTHGLIHDDI--VDDSPVRRGA 110

Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHN 153
            +V+  Y E            A++AG+     +  + +++P   +  ++R Q M ++   
Sbjct: 111 ASVYYAYRERFADRPQTALGLAVLAGDLAAFLSVRVLLTAP---VPRDLR-QAMAAVQAT 166

Query: 154 IGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA-CESGAIMAHA--SQNEK 207
            G   ++ GQ+LD++ +F    D   + ++ + K+      A  + G + A A  + +EK
Sbjct: 167 AGADTVV-GQILDLERDFGPLPDRATLDLVSEYKSARYSVLAPLQLGLLAAGADPAAHEK 225

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E  R +   +GI  Q+ DD LD   D
Sbjct: 226 ELAR-YATLVGISGQMCDDYLDLFAD 250


>gi|241895189|ref|ZP_04782485.1| possible trans-hexaprenyltranstransferase [Weissella
           paramesenteroides ATCC 33313]
 gi|241871495|gb|EER75246.1| possible trans-hexaprenyltranstransferase [Weissella
           paramesenteroides ATCC 33313]
          Length = 342

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 21/206 (10%)

Query: 34  QHNDRLLSAIRYALL-----GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           Q ND+    +  ALL     GGK +R          +  N      + AA+E +H  +LI
Sbjct: 47  QANDK---EVEQALLDMFRAGGKMLRPAFAIIIGQFYPGNTSNLKHIAAAVEMLHTATLI 103

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D+   RR  P++  ++ +  A  AG+ L    F+ ++     +   +R    L
Sbjct: 104 HDDI--IDDSPERRHAPSIQSKFGKDIAAYAGDYLFAATFKTLAYHTDDMT-LVRQATKL 160

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQN 205
                  L+ +L G++    + +     +   ++    KT AL   + + GA    A   
Sbjct: 161 -------LEDILTGELTQRTNHYDRHMTLADYKEQIAGKTAALFVLSAQLGAANGDAPDE 213

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
             + +  F  N+G+ FQ+ DD+LD +
Sbjct: 214 FVDLVTEFAFNVGMAFQILDDILDYQ 239


>gi|291294415|ref|YP_003505813.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279]
 gi|290469374|gb|ADD26793.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279]
          Length = 336

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 27/221 (12%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           + A+ ++     R+L    Y   GGK +R  L+      +  +    L V AA+E    +
Sbjct: 26  EAATRLELAQFARMLR--DYPERGGKMLRGTLLVYTGLAYGASLEGVLPVAAALELFQNW 83

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNI 142
           +LIHDD+   D    RRGKP +H  Y    A+ AG+ L    + ++    + +  L + +
Sbjct: 84  ALIHDDI--EDASDERRGKPALHKLYGVPLALNAGDALHARQWALLVEAGASRAVLLEFV 141

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVF--MIQKMKTGALMCFACESG 196
           R     +   ++ +  M  GQ  D+ +    E + +   +   +  ++ GAL     E  
Sbjct: 142 RMVEQTAQGQHLEMSWM-EGQRFDLGEPDYLEMVGQKAAYYTAVAPLRLGALAA-GAEPP 199

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           AI + A           G  LGI FQ+ DD+L+   D P K
Sbjct: 200 AIFSEA-----------GLKLGIGFQIVDDVLNLMGD-PAK 228


>gi|302557424|ref|ZP_07309766.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000]
 gi|302475042|gb|EFL38135.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000]
          Length = 391

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 46/211 (21%)

Query: 49  GGKKIRS-FLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R+ F      +       TA LR GAA+E +   +L+HDD+  MD    RRG P 
Sbjct: 76  GGKRLRAAFAFCGWRAAGGTGDATAVLRTGAALELLQACALVHDDV--MDGSLRRRGGPA 133

Query: 107 VHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           +H++                +   +A++AG+  L +A            D++ ++  L  
Sbjct: 134 LHVELARGHWAAGMHGSAEAFGTSSAVLAGDLALAWA------------DDLLTETALGT 181

Query: 151 THNIGLQG--------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFA--CESGA 197
            H   L          M+ GQ  D+  +    + V     I  +K+ AL   A     G 
Sbjct: 182 PHGGRLHEEWRAMRTEMVAGQYRDLHAQAARSSGVDEALDIATLKS-ALYTVARPLALGG 240

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +A A     + LR  G   G+ FQL DDLL
Sbjct: 241 SLAGAGDRTLDALRAAGRCAGLAFQLRDDLL 271


>gi|255521547|ref|ZP_05388784.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
           J1-175]
          Length = 126

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 33/51 (64%)

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           I   KTG L+ FA  S A +A A   + +RLR F EN+GI FQ++DD+LD 
Sbjct: 8   IHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDV 58


>gi|317506600|ref|ZP_07964392.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316255109|gb|EFV14387.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 378

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 31/229 (13%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIE 80
           + A+ +  Q  D +     + L  GK+IR                  + +   RV AA+E
Sbjct: 45  EEAARIGPQFADVVAELSTFVLGSGKRIRPAFAWLGWLGAGGDAAGASAVPVQRVCAALE 104

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGNGLL 124
            +    L HDD+  +D   +RRG+P++H +++                E  AI+AG    
Sbjct: 105 LLQAGLLAHDDI--IDQSDLRRGEPSLHRRFEAEHSRERWAGRSERHGEALAILAGELAF 162

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFM 179
            +A ++ +     + +  R     +         ++GGQ LD+      DE  +E    +
Sbjct: 163 VWADDLAAEGLDAVTEADRPAFRRAWAAM--RSEVIGGQCLDVLAQAGGDE-SEEAAARV 219

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           I+       +    E G ++A A +      R FGE++G  FQL DDLL
Sbjct: 220 IRWKTASYTVARPLELGGVLARADEALLTFYRGFGEDVGAAFQLQDDLL 268


>gi|164605006|dbj|BAF98299.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 328

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 27/210 (12%)

Query: 38  RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTALRVGAAI--------------- 79
           +L SA  Y     + GK++R  ++   A+  NV H+    VG  +               
Sbjct: 102 KLASAAEYFFKMGVEGKRLRPTVLLLMATALNV-HIPEQIVGDTLAAELRTRQQCIAEIT 160

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RR   +++       A++AG+ LL+ A   ++S K    
Sbjct: 161 EMIHVASLLHDDV--LDDAETRRSISSLNFVMGNKVAVLAGDFLLSRACVAVASLK---N 215

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S L +++ H +  + M   QM    ++             KT +L+  +C++ A++
Sbjct: 216 TEVVSLLAIAVEHLVTGETM---QMTCTSEQRCSMEYYMKKTYYKTASLISNSCKAIALL 272

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  +         +G+NLG+ FQL DD+LD
Sbjct: 273 AGQTTEVATLAFEYGKNLGLAFQLIDDVLD 302


>gi|317125086|ref|YP_004099198.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043]
 gi|315589174|gb|ADU48471.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043]
          Length = 368

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 39/220 (17%)

Query: 39  LLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+ ++   L GGK +R SFL     +    +    +R+ A++E     +L+HDD+  MD 
Sbjct: 39  LVDSVSRLLSGGKGLRASFLYWGYRAAGAADSDALVRLSASMEFFQAAALLHDDV--MDR 96

Query: 98  GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQL 138
              RRG P+ H                 ++ E  AI+AG+  LT+  E+ S+   P   L
Sbjct: 97  SDTRRGMPSAHRAVADLHRSRGWAGDDARFGEGAAILAGDLCLTWCDELFSTCGLPAEDL 156

Query: 139 K------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                  D +R+QLM     ++ L+   G   LD++        V   +  K      + 
Sbjct: 157 ARGRGAFDLMRTQLMGGQFLDL-LESARGWDGLDLEARIASARNVIRYKSAK------YT 209

Query: 193 CES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E     GA +  A +     L  +G  LG  FQL DDLL
Sbjct: 210 IEHPLLIGARVGGAPEAALGDLSAYGLALGEAFQLRDDLL 249


>gi|149176626|ref|ZP_01855238.1| polyprenyl synthetase [Planctomyces maris DSM 8797]
 gi|148844505|gb|EDL58856.1| polyprenyl synthetase [Planctomyces maris DSM 8797]
          Length = 611

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 22/235 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF-------- 65
            D IL  L  +T +  +T        AI Y  L  GGK+ R F+                
Sbjct: 264 FDQILPPLRTKTEAAARTPLGK--TEAISYDWLKHGGKRFRPFITLAAYDALIKAQQADD 321

Query: 66  ---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                  L   +   AIE  H  SLIHDD+   D+   R G+ T+H Q+    AI  G+ 
Sbjct: 322 TAETTYPLGVQKAAMAIEVFHKASLIHDDI--EDDDQYRYGRETLHRQHGTGMAINIGDY 379

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           L+   + +++  +  +     S L+  +S  H    +G  G +M   + E  +       
Sbjct: 380 LIGVGYRLLNEARADIGAEAASDLIEKMSAAHIRLCEGQ-GAEMAWQESETFELAPLDAL 438

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I  +KT      A  +G  M  +    +E +  F  ++G+ FQ+ +DL D + D
Sbjct: 439 QIYALKTSPAFEAALYAGIRMTGSVGEYEELISSFSRHIGVGFQILNDLKDWQGD 493


>gi|167045407|gb|ABZ10062.1| hypothetical protein ALOHA_HF4000APKG10F15ctg4g8 [uncultured marine
           crenarchaeote HF4000_APKG10F15]
          Length = 100

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 17/102 (16%)

Query: 14  KRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNH 69
           K+I+ +LD +L L T S  +          ++YAL GGK+IR     L +EC    + N 
Sbjct: 10  KKINNVLDSELELYTESEFK--------EPLKYALGGGKRIRPIILLLASECVGEIDDNT 61

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
             A     AIE +H  S+IHDD+  +DN  IRR K   HI+Y
Sbjct: 62  FAA---ACAIEFLHTESVIHDDI--IDNETIRRQKDPFHIKY 98


>gi|149924264|ref|ZP_01912637.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
 gi|149814889|gb|EDM74454.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
          Length = 394

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/247 (21%), Positives = 103/247 (41%), Gaps = 29/247 (11%)

Query: 5   LPSKLQENSKRIDTILDDLLLQ---TASHMQTQHNDRLLS----------AIRYALLGGK 51
           +P+ L+ +  R+  +L++L+ +    +  ++ +   RL             + Y L   K
Sbjct: 1   MPAYLEGSRARVVAVLEELIAEQRRRSPGIEDRTEGRLEGDPYGPVLYDLMLDYPLREAK 60

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            +R  L          N   AL   + +E  H   L+HDD+   D  ++RRG PT+H  +
Sbjct: 61  GLRPALCIATCRALGGNLEAALPTASVLELYHNAFLVHDDV--EDRSHVRRGGPTLHAAH 118

Query: 112 DEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ 168
            +  A+  G+G+L       + +  +  L   +R  + M  ++        + GQ +++ 
Sbjct: 119 GQAIAVNVGDGMLALTLRPLLANIERVGLGPALRILEAMAEMSERT-----VEGQAMELD 173

Query: 169 ------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
                  E  D+  + M+ +             GA+ A +     E+L  F  +L + FQ
Sbjct: 174 WIRRNTWELSDDDYIEMVVRKTGWYSFIIPTRCGALCARSDPKVCEQLERFARDLSVAFQ 233

Query: 223 LADDLLD 229
           + DD+L+
Sbjct: 234 IQDDVLN 240


>gi|224068584|ref|XP_002326151.1| predicted protein [Populus trichocarpa]
 gi|222833344|gb|EEE71821.1| predicted protein [Populus trichocarpa]
          Length = 321

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 28/212 (13%)

Query: 38  RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHL------------TALR-----VGA 77
           +L SA  Y     + GK+ R  ++   A+  NV  L            T LR     +  
Sbjct: 8   KLASAAEYFFKMGVQGKRFRPTVLLLMATALNVRILETETGSEGDALTTELRKRQQSIAE 67

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D+   RRG  ++++      A++AG+ LL+ A   ++S K  
Sbjct: 68  ITEMIHVASLLHDDV--LDDADTRRGIGSLNLVMGNKVAVLAGDFLLSRACVALASLKNT 125

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               + + L  ++ H +  + M   QM    ++             KT +L+  +C++ A
Sbjct: 126 ---EVVTLLATAVEHLVNGETM---QMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIA 179

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A  +         +G+NLG+ +QL DD+LD
Sbjct: 180 LLAGQTTEVAMLAFEYGKNLGLAYQLIDDVLD 211


>gi|221134874|ref|ZP_03561177.1| Geranylgeranyl pyrophosphate synthase [Glaciecola sp. HTCC2999]
          Length = 188

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 8/150 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    + +     + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRLRPLLCVLSAQALGITNQQHHHLAAIIEFIHTATLLHDDV--VDESLLRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        DN++   +LS   N   QG +  Q++++ 
Sbjct: 105 ALFGNQASVLVGDFLYSRAFQMMVEL-----DNMKVMRILSDATNRIAQGEV-MQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAI 198
           D    E   F +   KT  L   A +  A+
Sbjct: 159 DPNTTEQSYFDVIYSKTARLFEAATQLAAV 188


>gi|49259556|pdb|1VG4|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima F132aL128A
           MUTANT
 gi|49259557|pdb|1VG4|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima F132aL128A
           MUTANT
          Length = 299

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +  L++        M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNNKARRAALNVIGK-----MSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|297565930|ref|YP_003684902.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946]
 gi|296850379|gb|ADH63394.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946]
          Length = 319

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 21/187 (11%)

Query: 49  GGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R   +FL +   +L  V +   + +  A+E +H  +L+HDDL  +D+   RRG  
Sbjct: 43  GGKRVRPQLAFLASR--ALGGVPY--EMELALAVELLHSTTLLHDDL--VDDAETRRGHV 96

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
               +Y    +++AG+             +     +I  ++ L    +   + +   ++L
Sbjct: 97  AAFRKYGNAVSVLAGD---------YLLSRLLYLLSITGRMELVYMFSEVARELAESEVL 147

Query: 166 DIQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             Q   + +      +++   KT +LM  ACE  A++ +A    ++ L  FG   G  FQ
Sbjct: 148 QFQIAALGDYSFEAYERIITGKTASLMRLACEGAAVLGNAPSEWRQALADFGLFYGQAFQ 207

Query: 223 LADDLLD 229
           + DD LD
Sbjct: 208 MRDDYLD 214


>gi|300858828|ref|YP_003783811.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686282|gb|ADK29204.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302331089|gb|ADL21283.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276777|gb|ADO26676.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis I19]
          Length = 393

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 43/215 (20%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDN 97
           + L GGK+IR       A     N L         L   +++E I   +LIHDD+  +D 
Sbjct: 77  FVLGGGKRIRPSYA--WAGFLAGNGLEGTEDPEAVLASISSLELIQACALIHDDI--IDA 132

Query: 98  GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG+PTVH                  + E  AI+ G+    +A ++        + +
Sbjct: 133 SDSRRGQPTVHRSAEACHRDNSWNGDSAHFGESIAILLGDLAFAWADDM-------FRTS 185

Query: 142 IRSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195
             S   ++ T N   +GM    +GGQ+LD+  E      + + + +       +  E   
Sbjct: 186 GLSDAAIARTSN-AWRGMRTEVIGGQLLDVFLESAGSESIELAENVNRFKTAAYTIERPL 244

Query: 196 --GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             GA +A A +     LR +G ++G+ +QL DDLL
Sbjct: 245 HIGAAIAGADERIVHALRDYGRDIGVAYQLRDDLL 279


>gi|254574320|ref|XP_002494269.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115]
 gi|238034068|emb|CAY72090.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115]
 gi|328353910|emb|CCA40307.1| hexaprenyl pyrophosphate synthetase,mitochondrial precursor [Pichia
           pastoris CBS 7435]
          Length = 489

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 46/198 (23%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----- 128
           R+   +E IH  SL+HDD+  +D    RRG+P+ ++ +    AI+AG+ LL  A      
Sbjct: 192 RLAEVVEMIHTASLLHDDV--IDFSDSRRGRPSGNVAFTNKMAILAGDFLLGRASVELGR 249

Query: 129 ----EIISSPKTQLKDNIRSQLMLSLTHNIGLQ--------------------------- 157
               E++    T + + +  + M     N  LQ                           
Sbjct: 250 LRNSEVVELMSTSIANLVEGEFMQ--LKNTVLQPDITMVEGNPTPIPEATGKVPTEISEY 307

Query: 158 ----GMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLR 211
                ++ G+ +   +E ++    + + K  +KT AL+  +  S AI+A   +       
Sbjct: 308 SVPGAIVDGKRIITHEENVNAAFDYYLHKTYLKTAALISKSSRSTAILAGCQEEVINNCY 367

Query: 212 CFGENLGIIFQLADDLLD 229
            FG NLG+ FQ+ DD+LD
Sbjct: 368 RFGRNLGLCFQIVDDMLD 385


>gi|328543228|ref|YP_004303337.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase
           [polymorphum gilvum SL003B-26A1]
 gi|326412974|gb|ADZ70037.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Polymorphum gilvum SL003B-26A1]
          Length = 336

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F       + + A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 55  GGKRLRPMLTLALADMFGYQGSGHVTLSASVEFMHTATLLHDDV--VDESDMRRGKLAAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+    +  +G +  Q+   +
Sbjct: 113 KLWGNQASVLVGDYLLGQAFKMMVDVGS-----LEALRVLAEASAVIAEGEVM-QLGAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A  S       R +G  LG+ FQL DD L
Sbjct: 167 NLATSEASYMKVIEAKTAALFAAAAEVGPIIAGQSAETCAAARRYGMELGLAFQLVDDAL 226

Query: 229 D 229
           D
Sbjct: 227 D 227


>gi|318081668|ref|ZP_07988981.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces sp.
           SA3_actF]
          Length = 258

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 34/206 (16%)

Query: 49  GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GG+++RS  V       C +        AL VGAA+E +   +L+ DD+  MDN  +RRG
Sbjct: 59  GGRRLRSAFVWWGLRVACPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRG 116

Query: 104 KPTVHI---------------QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146
           +P +H+                + +  A++AG+  + +A +  +   P  ++   +R   
Sbjct: 117 QPALHVLLGSTRPAAAGPGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLW 176

Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +  T       M+ GQ LD+    D     T       +K+G            +  A+
Sbjct: 177 SVLRTE------MIAGQYLDLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAA 230

Query: 204 QNEKER-LRCFGENLGIIFQLADDLL 228
             E  R LR  G   G+ FQL DDLL
Sbjct: 231 PPEVCRVLRAAGGAAGLAFQLRDDLL 256


>gi|239933102|ref|ZP_04690055.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           ghanaensis ATCC 14672]
          Length = 463

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)

Query: 44  RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           R+   GGK++R     + +  C      +   ALR+GAA+E +   +L+HDD+  MD   
Sbjct: 101 RFTRTGGKRVRPRFVWWTLRACGGGDGPSVAAALRIGAALELLQTCALVHDDV--MDGST 158

Query: 100 IRRGKPTVHI----QY------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
           +RR +P +H+    QY                AI+AG+  L +A ++++  +T L     
Sbjct: 159 LRRARPALHVDVAAQYGGAAPSARAERLGGAAAILAGDLALAWADDLLA--ETPLAPRS- 215

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIM 199
           ++ +  L  ++  + M+ GQ LD+  +      +             ++ E     GA +
Sbjct: 216 ARAVRRLWADMRTE-MVAGQYLDVHGQATGSRSLPRALHAACLKSALYSVERPIALGAAL 274

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A A    +E L   G   G+ FQL DDL D
Sbjct: 275 ADADDATREALGSAGRCAGLAFQLRDDLDD 304


>gi|317127634|ref|YP_004093916.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315472582|gb|ADU29185.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 326

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 19/153 (12%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLK 139
           H  SL+HDD+  +D+   R    T+H  +    AI +G+ L   +F+I++   S    L 
Sbjct: 81  HMASLVHDDV--IDDADTRHNHATIHTMHGNKFAIYSGDYLFCISFQILAQHASSLAHLD 138

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
            N R           G++ +L G++  +   F     V   + ++  KT  L   +C SG
Sbjct: 139 FNTR-----------GMEKILAGELDQLNSRFKPSLSVKSYLSRVAGKTAQLFAISCYSG 187

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A+   A++ +       G  +G+ FQ+ DD+LD
Sbjct: 188 AMEGGATRKQAMNAWNMGHYIGMTFQIMDDILD 220


>gi|328713339|ref|XP_001947197.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
           [Acyrthosiphon pisum]
          Length = 338

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 12/157 (7%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V    E IH  SLIHDD+  +D    RRGKP+V+  +      +AG+ +L     +I+  
Sbjct: 155 VAMIAEMIHSASLIHDDV--IDQSDFRRGKPSVNALWSHKKVAMAGDYILAVTSMMIARL 212

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFA 192
                    SQ++  L     +Q  LG +      E  +E     + K   KT +L+  +
Sbjct: 213 NHNDVTITLSQIITDLVQGEFMQ--LGSK------ETENERFAHYLTKTYRKTASLIANS 264

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            ++ A++A A     +    +G N+G+ FQL DDLLD
Sbjct: 265 VKAEAMLAGADDQLVDVSFEYGRNIGLAFQLVDDLLD 301


>gi|302206535|gb|ADL10877.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis C231]
          Length = 372

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 43/215 (20%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDN 97
           + L GGK+IR       A     N L         L   +++E I   +LIHDD+  +D 
Sbjct: 56  FVLGGGKRIRPSYA--WAGFLAGNGLEGTEDPEAVLASISSLELIQACALIHDDI--IDA 111

Query: 98  GYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG+PTVH                  + E  AI+ G+    +A ++  +        
Sbjct: 112 SDSRRGQPTVHRSAEACHRDNSWNGDSAHFGESIAILLGDLAFAWADDMFRTSGL----- 166

Query: 142 IRSQLMLSLTHNIGLQGM----LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195
             S   ++ T N   +GM    +GGQ+LD+  E      + + + +       +  E   
Sbjct: 167 --SDAAIARTSN-AWRGMRTEVIGGQLLDVFLESAGSESIELAENVNRFKTAAYTIERPL 223

Query: 196 --GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             GA +A A +     LR +G ++G+ +QL DDLL
Sbjct: 224 HIGAAIAGADERIVHALRDYGRDIGVAYQLRDDLL 258


>gi|221053263|ref|XP_002258006.1| polyprenyl synthetase [Plasmodium knowlesi strain H]
 gi|193807838|emb|CAQ38543.1| polyprenyl synthetase, putative [Plasmodium knowlesi strain H]
          Length = 522

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 23/168 (13%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+ AA E IH  SL+HDD+  +D+   RRG   +H +Y    +I++G+ LL  A  + +S
Sbjct: 251 RIIAASEIIHMGSLLHDDV--IDDSNNRRGALALHKKYGNKISILSGDFLLARASSVFAS 308

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKM-KTGALM 189
                      Q+     +   ++ ++ G++L    +F    D  + + I+   KT +L 
Sbjct: 309 IGC-------PQICKRFAY--VVESLIKGELLQTNLKFNNIEDALKTYFIKTYHKTASLF 359

Query: 190 C--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLDCEED 233
              FAC   AI++   +NEK    CF  G ++G+ FQL DD LD + D
Sbjct: 360 SHLFAC--MAILSF--KNEKIINLCFNLGLHIGMAFQLYDDYLDYKPD 403


>gi|294811347|ref|ZP_06769990.1| Putative geranylgeranyl diphosphate synthase [Streptomyces
           clavuligerus ATCC 27064]
 gi|326439921|ref|ZP_08214655.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294323946|gb|EFG05589.1| Putative geranylgeranyl diphosphate synthase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 395

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 41/209 (19%)

Query: 49  GGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  L  V   A+  + +    L V A++E    + LIHDD+  +D+  +RRG+P 
Sbjct: 92  GGKRLRPLLCVVGWHAAGGDEDPAAVLPVAASLELYQTFVLIHDDI--IDDSALRRGRPA 149

Query: 107 VH-------IQYDEVT------AIIAGNGLLTYAFEII-----SSPKT----QLKDNIRS 144
           VH       + +D         A++AGN  L +  E++      +P+     ++ D + +
Sbjct: 150 VHRALAARHVGHDSAARLGAGEALLAGNLALIWCQELLHTAELDTPRRAAVHRVNDTMLA 209

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHAS 203
           ++M     +     +LG + LD      D+ +  + I + KT A          + A   
Sbjct: 210 EVMFGQYRD-----LLGTERLD------DDIEAALGIIRYKTAAGTIQRPLQLGVAAGGG 258

Query: 204 QNEKERLRC--FGENLGIIFQLADDLLDC 230
             E  R  C  FG  LG  FQL DDLLD 
Sbjct: 259 DEETHRF-CTEFGVPLGEAFQLRDDLLDV 286


>gi|149280267|ref|ZP_01886389.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39]
 gi|149228956|gb|EDM34353.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39]
          Length = 323

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 14/177 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR   V   A L      +  R  A +E +H  +L+HDD+  +DN Y RRG  +++ 
Sbjct: 45  GKQIRPMFVFFAAKLCGGILESTHRGAALVELLHTATLVHDDV--VDNAYERRGFFSINA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL     ++S    + +       +L +     ++ M  G++L I+ 
Sbjct: 103 LWKNKIAVLVGDYLLAKGL-LLSVNNGEFR-------LLQIVSE-AVKQMSEGELLQIEK 153

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                I E   F + + KT +L+   C  GA  A A     E++R FGE +GI FQ+
Sbjct: 154 VRRMDISEDLYFDVIRQKTASLIASCCACGAASAGADDETIEKMRLFGEKVGIAFQI 210


>gi|327179707|gb|AEA30255.1| putative isoprenyl diphosphate synthase [Streptomyces sp. Acta
           2897]
          Length = 347

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 17/188 (9%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A+ GGK++R  LV   A          +      E +H  SL HDD+  MD   +R G P
Sbjct: 57  AVSGGKRMRPLLVLLGAEFGEEWRDGVVDAAVIAELVHISSLYHDDV--MDGAALRHGVP 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-MLGGQM 164
           + + ++ E  A+  G+ LL  A  + ++      D +R         N  + G ++ GQ+
Sbjct: 115 SANARWGERLAVAGGDWLLARAARLAAALG---PDMVR--------FNADVAGDLVEGQL 163

Query: 165 LDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           L++      E  V   F +   KT AL+  A  +GA+ A A   +   L  +G  LGI F
Sbjct: 164 LEMTGPAEGEDPVQHFFRVTSGKTAALLAMALGAGALQAGAPAGQGRSLMEYGHQLGIAF 223

Query: 222 QLADDLLD 229
           Q++DDLLD
Sbjct: 224 QISDDLLD 231


>gi|198419107|ref|XP_002123764.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
           subunit 1 [Ciona intestinalis]
          Length = 400

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++    E IH  SLIHDD+    N  +RRGK +V+    +  A++ GN ++  A +++SS
Sbjct: 153 KISLIAEMIHVGSLIHDDVVDFSN--VRRGKRSVNALCGDHNAVMVGNYVVANASKLLSS 210

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  N    +++S   +  ++G    Q  D +D+F            KT +L+   C
Sbjct: 211 I-----GNPEITIIISQIIDDIVRGEFMQQ--DNKDQF---KHYLKKTYKKTASLIANCC 260

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++ A ++  +    E    +G N+G+ FQL DDLLD
Sbjct: 261 KAVACLSSNNNEVIEAAYQYGSNIGMAFQLVDDLLD 296


>gi|88856502|ref|ZP_01131159.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium
           PHSC20C1]
 gi|88814156|gb|EAR24021.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium
           PHSC20C1]
          Length = 372

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 35/181 (19%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG-LLTY---AFEII 131
            +A+E  H  +L+HDD+  MD    RRG P+ H +++++    A  G   TY   A  ++
Sbjct: 88  ASALELFHAAALVHDDI--MDRSDTRRGSPSAHRRFEQMHRDGAWTGNAETYGQSAALLL 145

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQG----------MLGGQMLDIQDE----------F 171
                   D +  + +  L     L            ++ GQ LDI DE           
Sbjct: 146 GDLLLGWSDELLGRGLAMLPRPAALAARREFMTMRTEVMAGQYLDIHDESAWASYPESEA 205

Query: 172 IDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D  Q  +I K        ++ E+    GA +   ++ +   LR FG  LG+ FQL DD+
Sbjct: 206 LDRAQRVLIYKSAK-----YSVEAPLAVGASLGAGTEEQIAALRAFGLPLGVAFQLRDDV 260

Query: 228 L 228
           L
Sbjct: 261 L 261


>gi|46015922|pdb|1V4I|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima F132a Mutant
          Length = 299

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAALNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|291441451|ref|ZP_06580841.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC
           14672]
 gi|291344346|gb|EFE71302.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC
           14672]
          Length = 453

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 30/211 (14%)

Query: 44  RYALLGGKKIRS----FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           R+   GGK++R     + +  C      +   ALR+GAA+E +   +L+HDD+  MD   
Sbjct: 91  RFTRTGGKRVRPRFVWWTLRACGGGDGPSVAAALRIGAALELLQTCALVHDDV--MDGST 148

Query: 100 IRRGKPTVHI----QY------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
           +RR +P +H+    QY                AI+AG+  L +A ++++  +T L     
Sbjct: 149 LRRARPALHVDVAAQYGGAAPSARAERLGGAAAILAGDLALAWADDLLA--ETPLAPRS- 205

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIM 199
           ++ +  L  ++  + M+ GQ LD+  +      +             ++ E     GA +
Sbjct: 206 ARAVRRLWADMRTE-MVAGQYLDVHGQATGSRSLPRALHAACLKSALYSVERPIALGAAL 264

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A A    +E L   G   G+ FQL DDL D 
Sbjct: 265 ADADDATREALGSAGRCAGLAFQLRDDLDDV 295


>gi|110638671|ref|YP_678880.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406]
 gi|110281352|gb|ABG59538.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406]
          Length = 326

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 36/208 (17%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D+++S I      GK++R   V   A L  NVN  T  R  A IE +H  +L+HDD+   
Sbjct: 36  DKIMSYI--VKRNGKQMRPMFVFLSAHLAGNVNDSTQ-RGAALIELLHTATLVHDDVVDD 92

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH--- 152
            +   RRG  +++  +    A++ G+ LL+                    L+LS+ H   
Sbjct: 93  SD--YRRGMFSINALWKNKIAVLVGDYLLSKG------------------LLLSINHGDF 132

Query: 153 ------NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
                 +  ++ M  G++L I+      I+E   F I + KT +L+   C  G     A 
Sbjct: 133 HLLKIVSNAVREMSEGELLQIEKARNLNINEEIYFEIIRQKTASLIASCCAVGVSSTGAD 192

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231
           +   ER + FGE +G+ FQ+ DDL D E
Sbjct: 193 EALVERAKMFGEKIGMAFQVKDDLFDYE 220


>gi|332670673|ref|YP_004453681.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
 gi|332339711|gb|AEE46294.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
          Length = 372

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 52/260 (20%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRS-FLVTECASLF 65
           L++   ++D +L D + +    ++   +D L  + A+   L GGK++R+ F      +  
Sbjct: 10  LEDVRTQVDAVLADHVERLRRELEPTGDDTLPLVDAVARMLSGGKRLRAAFCWWSWRAHG 69

Query: 66  NVNHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV------- 114
            V       T +RVGAA+E     +L HDD+  MD    RRG P+ H  ++ +       
Sbjct: 70  GVPGTPEAGTVVRVGAALELFQAAALFHDDV--MDESDTRRGMPSAHRAFEAMHVERGLS 127

Query: 115 ---------TAIIAGNGLLT-----YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
                     AI+ G+  L      +A  +  +P ++ +   RS+ +  L        + 
Sbjct: 128 GDVRQFGMSAAILLGDLALVASEQEFASALADAPTSRAR---RSRAVYDLMRTE----VT 180

Query: 161 GGQMLDI--------QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKE 208
            GQ LD+         D   DE++   + + K+     ++ E     GA +A A      
Sbjct: 181 VGQYLDVLAQSLPWGDDPDADESRARAVIRAKSA---RYSVEHPLTLGAALADADDESLA 237

Query: 209 RLRCFGENLGIIFQLADDLL 228
             R  G  LG  FQL DDLL
Sbjct: 238 ACRQVGLPLGEAFQLRDDLL 257


>gi|297171036|gb|ADI22050.1| geranylgeranyl pyrophosphate synthase [uncultured myxobacterium
           HF0200_05J13]
          Length = 339

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 15/186 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GK++R   V   A         A++ +  A E +H  +L+HDD+  +D G  RRG   
Sbjct: 56  LPGKRVRPLCVVLAARAGGAPFNEAVKQLAIACELVHSATLLHDDV--LDEGSERRGAVA 113

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-- 164
             + Y    +++ G+ LL  A   +          + S LM  +       GM+  ++  
Sbjct: 114 ARLAYGNSASVLGGDYLLVDALRRVYKTGEH---GLLSDLMDVI------DGMVKAEVAQ 164

Query: 165 LDIQDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           L+ + +F  +   ++ I   KT A+  +   +G I    S+   + L  +G  +G+ FQ+
Sbjct: 165 LERRGKFDADRDAYLEIIYGKTAAIFEWGLRAGGIAGGLSEEAAQGLGKYGAAIGMAFQV 224

Query: 224 ADDLLD 229
            DD+LD
Sbjct: 225 VDDILD 230


>gi|321261930|ref|XP_003195684.1| trans-hexaprenyltranstransferase [Cryptococcus gattii WM276]
 gi|317462158|gb|ADV23897.1| trans-hexaprenyltranstransferase, putative [Cryptococcus gattii
           WM276]
          Length = 483

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 17/169 (10%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+ +  E IH  SL+HDD+  +D   +RRG P+    +    +I++G+ LL  A   
Sbjct: 217 TQRRLASITEMIHVASLLHDDV--IDASSLRRGTPSAPSTFGNKLSILSGDFLLGRASVA 274

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MIQK--MKTG 186
           ++    +L      +L+ ++  N+ ++G +       + E    T+ F   ++K  +KT 
Sbjct: 275 LA----RLGSREVVELLATVIANL-VEGEVMQLRATSEPEKAPTTKGFEDYMRKTYLKTA 329

Query: 187 ALMCFACESGAIMAH-ASQNE-----KERLRCFGENLGIIFQLADDLLD 229
           +LM  +  +  ++    S NE     K+    +G NLGI FQL DD LD
Sbjct: 330 SLMAKSARAAVVLGGCGSVNEEGAWVKDVAYGYGRNLGIAFQLIDDALD 378


>gi|189026971|emb|CAQ55981.1| polyprenyl synthetase [Aphanomyces euteiches]
          Length = 335

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 83/161 (51%), Gaps = 16/161 (9%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D    RRG  +V+  +    +I+AG+ LL  +   ++ 
Sbjct: 121 RLAEITEMIHTASLLHDDV--IDEADTRRGMQSVNKVFGSKMSILAGDFLLARSSICLA- 177

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKM-KTGAL 188
                   +RS   + L  +  ++ ++ G+++ +    ++  I   + ++ +   KTG+L
Sbjct: 178 -------RLRSLEAVELM-STAIEHLVKGEVMQMRHADKNGAISPFEYYLRKNYYKTGSL 229

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           M  +C++  I+   S+   E    +G +LG+ FQL DD+LD
Sbjct: 230 MANSCKASLILGEHSERVCELGFAYGRHLGLAFQLIDDVLD 270


>gi|145225827|ref|YP_001136505.1| trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK]
 gi|145218313|gb|ABP47717.1| Trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK]
          Length = 335

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A L        + V GA IE +H  +L HDD+  MD   +RRG P+ 
Sbjct: 55  GGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+ L   A  + S    +    I     L +T          GQM + 
Sbjct: 113 NARWGNNIAILAGDYLFATASRLTSRLGPEAVRIIADTFALLVT----------GQMRET 162

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   D+         +   KT  L+  +   GA  + + + + ERL   G  +G  FQ++
Sbjct: 163 RGAADQVDSVDHYLKVVYEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQIS 222

Query: 225 DD 226
           DD
Sbjct: 223 DD 224


>gi|225021908|ref|ZP_03711100.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945295|gb|EEG26504.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 368

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 93/216 (43%), Gaps = 44/216 (20%)

Query: 45  YALLGGKKIRSFLV----TECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNG 98
           Y L GGK+IR   V         L N     A  LR  +A+E I   +LIHDD+  +D+ 
Sbjct: 49  YVLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDI--IDSS 106

Query: 99  YIRRGKPTVH----IQYDE------------VTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH     +++E              AI+ G+    +A +++ +         
Sbjct: 107 DTRRGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAALD 166

Query: 143 RSQLMLSLTHNIGLQGM----LGGQMLDI-----QDEFIDETQVFMIQKMKTGALMC-FA 192
           R Q           +GM    +GGQ+LDI      DE I   QV  + + KT A      
Sbjct: 167 RMQPA--------WRGMRTEVIGGQLLDIIHEASGDEDIATAQV--VNRFKTAAYTIERP 216

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              GA +A A       LR +G ++G+ FQL DD L
Sbjct: 217 LHLGAALAGADAATIAALRAYGTDIGVAFQLRDDQL 252


>gi|315442465|ref|YP_004075344.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
 gi|315260768|gb|ADT97509.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
          Length = 329

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A L        + V GA IE +H  +L HDD+  MD   +RRG P+ 
Sbjct: 49  GGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSA 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+ L   A  + S    +    I     L +T          GQM + 
Sbjct: 107 NARWGNNIAILAGDYLFATASRLTSRLGPEAVRIIADTFALLVT----------GQMRET 156

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   D+         +   KT  L+  +   GA  + + + + ERL   G  +G  FQ++
Sbjct: 157 RGAADQVDSVDHYLKVVYEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQIS 216

Query: 225 DD 226
           DD
Sbjct: 217 DD 218


>gi|108800235|ref|YP_640432.1| polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119869363|ref|YP_939315.1| polyprenyl synthetase [Mycobacterium sp. KMS]
 gi|126435858|ref|YP_001071549.1| polyprenyl synthetase [Mycobacterium sp. JLS]
 gi|108770654|gb|ABG09376.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. MCS]
 gi|119695452|gb|ABL92525.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. KMS]
 gi|126235658|gb|ABN99058.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. JLS]
          Length = 359

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 26/166 (15%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTY 126
           H  +L+HDD+  +D    RRG PTVH                 Q+    AI+AG+  L +
Sbjct: 87  HACALVHDDV--IDASATRRGLPTVHRLFADRHADRGWHGSSEQFGLSAAILAGDLSLVW 144

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A +I++S    L  + R Q + +   +I  + +LGGQ LDI  E      V     + T 
Sbjct: 145 ADDIVASVDLPLDAHRRVQRVWA---DIRTE-VLGGQFLDIAAEASGAQTVASAMTVNTY 200

Query: 187 ALMCFACESG-AIMAHASQNEKERLRCF---GENLGIIFQLADDLL 228
               +       + A A+ +  E L  F   G ++G+ FQL DD+L
Sbjct: 201 KTASYTVSRPLQLGAAAAADRPEVLEIFHQLGTDIGVAFQLRDDVL 246


>gi|254467778|ref|ZP_05081184.1| polyprenyl synthetase superfamily protein [beta proteobacterium
           KB13]
 gi|207086588|gb|EDZ63871.1| polyprenyl synthetase superfamily protein [beta proteobacterium
           KB13]
          Length = 303

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 15/182 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR+ L      L N+   T ++   A E IH  SLIHDD+   D    RRG  T+  
Sbjct: 52  GKFIRAQLALASGELLNLPKDTVIKWSVACELIHTASLIHDDICDQDEK--RRGLTTIWK 109

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y    AI  G+ ++  AF+ +S  +T     I   L+ SL+  + ++ ++ GQ+ D+  
Sbjct: 110 KYGVPAAICLGDFIIAQAFQKLSEIETGWHQTI---LLNSLS--LSMKKIIVGQVSDVG- 163

Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             +D  ++ M     I   KTG L+    +         ++E   L     ++G+ +Q+ 
Sbjct: 164 --VDIKKISMKDYEQIAYEKTGPLLMTPLDGMFRCKELPESELNGLNKLMNSIGLAYQMI 221

Query: 225 DD 226
           +D
Sbjct: 222 ND 223


>gi|307324885|ref|ZP_07604090.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306889383|gb|EFN20364.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 355

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 29/203 (14%)

Query: 46  ALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           A+  GK++R+ F      ++   +    +R  A++E +H  +++HDDL  +D+  +R G+
Sbjct: 51  AVADGKRLRAAFCYWGWRAVGQPDSDALVRAAASMELVHAAAVVHDDL--IDDSPLRHGR 108

Query: 105 PTVHIQYDEVT-------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           PT HI                   A++ G+ L++ A ++ ++         R++ + SL 
Sbjct: 109 PTAHIALRAAVRRRPRAVAAARSLAMLVGDLLMSLAGQMFATSGLPAAYLARARPLWSLL 168

Query: 152 HNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQN 205
                + ++ G+ L+I       D T    + + KT     +  E     G  +A A Q 
Sbjct: 169 A----RELIAGECLEILRTGADPDTTASLKVIRYKTAK---YTVEQPLLIGGALAGAGQR 221

Query: 206 EKERLRCFGENLGIIFQLADDLL 228
            +E    +G  LG  FQL DDLL
Sbjct: 222 LREGYSAYGLPLGEAFQLRDDLL 244


>gi|261209912|ref|ZP_05924212.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC341]
 gi|260840977|gb|EEX67509.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC341]
          Length = 243

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 77/147 (52%), Gaps = 8/147 (5%)

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           ++HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   
Sbjct: 1   MLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TELG-SMKILK 53

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS   
Sbjct: 54  LMSDAVNVIAEGEVQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEV 112

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
           +  ++ +G+ LG  FQL DD++D   D
Sbjct: 113 ELAMQNYGKYLGTAFQLIDDVMDYTSD 139


>gi|326790007|ref|YP_004307828.1| trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427]
 gi|326540771|gb|ADZ82630.1| Trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427]
          Length = 321

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 14/187 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR       A            + A +E  H  +L+HDD+  +D+  +RRGK TV  
Sbjct: 45  GKMIRPGFSIIAAKFGEYEEERTRVLAAVMEFFHMATLVHDDV--IDDAKLRRGKETVQS 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y +  A+  G+ L    F++++S  +     I S+ M  +           G++  +  
Sbjct: 103 KYGKDYAVYIGDYLFCICFKLLASTASLQSIQIDSKAMSRICL---------GEVEQLNS 153

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF---GENLGIIFQLADD 226
            F     V    K  +G        S  I A  S  +K+  R F   G N+G+ FQ+ DD
Sbjct: 154 RFDKNVSVKNYLKRVSGKTAELFSLSLYIGAAESNCDKKLSRLFWNIGHNIGMAFQIIDD 213

Query: 227 LLDCEED 233
           +LD   D
Sbjct: 214 ILDYVSD 220


>gi|325282325|ref|YP_004254866.1| Geranyltranstransferase [Deinococcus proteolyticus MRP]
 gi|324314134|gb|ADY25249.1| Geranyltranstransferase [Deinococcus proteolyticus MRP]
          Length = 343

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 28/205 (13%)

Query: 49  GGKKIRSFLVTECASLFNV--------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           GGK++R  +    A    V        +H  AL +   IE +H  SL+HDDL  +D+   
Sbjct: 57  GGKRLRPLVTLLSAQALQVGAPEDAGGHHGDALALAICIELLHSASLLHDDL--IDDADT 114

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+     +Y  V ++++G+ +L     ++S    +L    R      LT   G    +
Sbjct: 115 RRGQEAAFRRYGNVVSVMSGDFMLARLLMLLS----ELPAAAR------LTRAFGEVASV 164

Query: 161 --GGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
              G++L  Q   + + T  Q   I   KT AL+  A  + A++  AS  +++ LR +G 
Sbjct: 165 ICEGEVLQFQVAAYGNPTPEQYSRIIYGKTAALLELAAAAPALLLGASAAQEQALRQYGR 224

Query: 216 NLGIIFQLADDLLDC---EEDLPKK 237
            LG+ FQ+ DDLLD    EEDL K 
Sbjct: 225 ELGMAFQIRDDLLDLLGREEDLGKP 249


>gi|289804959|ref|ZP_06535588.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 235

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 6/134 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGK T +  +    +++ G+ + T AF++++S       +++   ++S   N+  +G 
Sbjct: 4   MRRGKATANAAFGNAASVLVGDFIYTRAFQMMTS-----LGSLKVLEVMSEAVNVIAEGE 58

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ +G  LG 
Sbjct: 59  VL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGT 117

Query: 220 IFQLADDLLDCEED 233
            FQL DDLLD   D
Sbjct: 118 AFQLIDDLLDYSAD 131


>gi|333022534|ref|ZP_08450598.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp.
           Tu6071]
 gi|332742386|gb|EGJ72827.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp.
           Tu6071]
          Length = 467

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 34/211 (16%)

Query: 49  GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GG+++RS  V       C +        AL VGAA+E +   +L+ DD+  MDN  +RRG
Sbjct: 72  GGRRLRSAFVWWGLRVACPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRG 129

Query: 104 KPTVHI---------------QYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQL 146
           +P +H+                + +  A++AG+  + +A +  +   P  ++   +R   
Sbjct: 130 QPALHVLLGSTRAAAAGPGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLW 189

Query: 147 MLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +  T       M+ GQ LD+    D     T       +K+G            +  A+
Sbjct: 190 SVLRTE------MIAGQYLDLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAA 243

Query: 204 QNEKER-LRCFGENLGIIFQLADDLLDCEED 233
             E  R LR  G   G+ FQL DDLL    D
Sbjct: 244 PPEVCRVLRAAGGAAGLAFQLRDDLLAVWGD 274


>gi|254577169|ref|XP_002494571.1| ZYRO0A04620p [Zygosaccharomyces rouxii]
 gi|238937460|emb|CAR25638.1| ZYRO0A04620p [Zygosaccharomyces rouxii]
          Length = 468

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 38/192 (19%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL---TYAFEI 130
           R+   +E IH  SL+HDD+  +D+   RRG+ + ++ +    A++AG+ LL   T A   
Sbjct: 174 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRASGNVAFTNKMAVLAGDFLLGRATVAISR 231

Query: 131 ISSPKT-----------------QLKDNIRSQLMLSLTHNIGLQGM---LGGQMLDIQ-- 168
           + +P+                  QLK+     + +    N  L      L  ++ D +  
Sbjct: 232 LRNPEVVELMSNSIANLVEGEFMQLKNTAVEDISIINQGNKPLPAASKKLNNEVHDYRVP 291

Query: 169 ---------DEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                    D+ I+    + + K  +KT AL+  +  + AI++   +   ++   FG+++
Sbjct: 292 RAVGEGISHDQMIETAFDYYLHKTYLKTAALISKSSRAAAILSGVDRTVVDQCYEFGKDI 351

Query: 218 GIIFQLADDLLD 229
           GI FQL DD+LD
Sbjct: 352 GICFQLVDDMLD 363


>gi|257067655|ref|YP_003153910.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
 gi|256558473|gb|ACU84320.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
          Length = 382

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 26/216 (12%)

Query: 35  HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLP 93
           H D L  A   A  GGK+ R  L+      F    H  A++VGAA+E +H   +I DD+ 
Sbjct: 32  HGD-LWQAFARATEGGKRARPVLLLAAHEAFGGGRHEAAVQVGAALELLHTSFVIQDDV- 89

Query: 94  SMDNGYIRRGKP----TVHIQYDEVTAIIAGN-------GLLTYAFEIISSPKTQLKDNI 142
            +D    RRG P    +V  +  E  A  AG+       G+L     ++++ +   + + 
Sbjct: 90  -IDGDETRRGAPNLPGSVAAEAREQGASPAGSRRLGVAAGILAGDLGLVAALRAVARCDA 148

Query: 143 RSQL---MLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VFMIQKMKTGAL-MCFA 192
              +   +L L  +  L     G++ D++ +     Q         + ++KT A      
Sbjct: 149 PGPVVDRLLDLFEST-LHTSAAGELADVRLQLTPAEQPAALRDALAVAELKTAAYSFQLP 207

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             +GA++A A   +   L   G  LGI FQL DDLL
Sbjct: 208 LHAGALLAGARPAQLTALDEVGALLGIGFQLIDDLL 243


>gi|67527046|gb|AAY68315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured marine
           bacterium 66A03]
          Length = 338

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 9/179 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ +       F  +    L   +A+E +H  SLIHDD+   D   IRR   +V  
Sbjct: 55  GKQLRAKIALSAGEKFGADDAACLHWASAVELLHNASLIHDDI--CDGDTIRRNNASVWA 112

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y    A+  G+ ++  AF+  ++    + ++    L+  L++++  +  + GQ L+  +
Sbjct: 113 KYGRDIALALGDWMIAEAFQ-QAAKAAHVSNSF--NLVTKLSNHV--KSTIAGQALEFDN 167

Query: 170 E-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             + D  +   I   KT  L   A E  A +A  S+   E +  +   +GI +Q A+D+
Sbjct: 168 ALYPDIDKYLEISAGKTAPLFVAAIEGIAEIAGRSE-LIEEINHYFVTMGICYQFANDI 225


>gi|291449452|ref|ZP_06588842.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291352399|gb|EFE79303.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 348

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 26/197 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A     +    +    A+E IH +SLIHDD+  MD    RR +PT+  
Sbjct: 59  GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQM 164
            Y    A++AG+ L   A   ++ +P       +R            L G LG    GQ 
Sbjct: 117 AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQ-----------LAGALGDLVHGQA 165

Query: 165 LDIQDEFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            D+  E    +        +   +   KTG+L+  A   GA +A A  +  E L   G +
Sbjct: 166 QDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRH 225

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQ  DDLL    D
Sbjct: 226 VGVAFQAVDDLLGIWGD 242


>gi|119504024|ref|ZP_01626105.1| IdsA [marine gamma proteobacterium HTCC2080]
 gi|119460027|gb|EAW41121.1| IdsA [marine gamma proteobacterium HTCC2080]
          Length = 346

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 12/192 (6%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y + GG+  R  L    A +F  +    +    +IE +H   LIHDD+   D    RRGK
Sbjct: 46  YPMRGGRMFRPSLCIATAKVFGASLEQVIPAAVSIELLHNALLIHDDIE--DESDERRGK 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           PT+H +     A+ AG+ L   +   II    +   D+I   L      +   Q    GQ
Sbjct: 104 PTLHKKIGTPLALNAGDSLAFLSLRPIIRGSASMGSDSIVRILE---EFDQMAQQTAEGQ 160

Query: 164 MLDI------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            LD+        E  +   + M+ K        F    GA++    +   + L  F   L
Sbjct: 161 ALDLGWRRDNHIELCEADYLKMVLKKTCWLTTLFPIRLGALIGSGGRANLDSLFNFAFFL 220

Query: 218 GIIFQLADDLLD 229
           G  FQ+ DD+L+
Sbjct: 221 GAAFQIQDDVLN 232


>gi|320582142|gb|EFW96360.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
           [Pichia angusta DL-1]
          Length = 469

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 41/194 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----- 128
           R+    E IH  SL+HDD+  +D    RRG+ + ++ +    AI+AG+ LL  A      
Sbjct: 175 RLAEITEMIHTASLLHDDV--IDFSDSRRGRDSGNVAFSNKMAILAGDFLLGRASVSLGR 232

Query: 129 ----EIISSPKTQLKDNIRSQLM----LSLTHNIGLQGMLGGQMLDI------------- 167
               E++    T + + +  + M      +  NIG Q   GG +  I             
Sbjct: 233 LRNSEVVELMSTAIANLVEGEFMQLKNTVMQPNIG-QIEDGGVVKQIPEPTGKVPVEVHE 291

Query: 168 ----------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                      +E ++    + + K  +KT +LM  +  S AI+A  +++  E    FG 
Sbjct: 292 YSVKTPETISHEENVEAAFQYYLHKTYLKTASLMSKSSRSAAILAGCNEDVIENCYQFGR 351

Query: 216 NLGIIFQLADDLLD 229
           NLG+ FQ+ DD+LD
Sbjct: 352 NLGLCFQIVDDMLD 365


>gi|119713545|gb|ABL97597.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
           bacterium EB0_39F01]
 gi|161170296|gb|ABX59266.1| short chain isoprenyl diphosphate synthase IdsA [uncultured marine
           bacterium EB000_55B11]
 gi|297183824|gb|ADI19947.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
          Length = 335

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R+ +  + ASL  ++  T+L    A+E +H  SLIHDD+   D    RRG+ ++ +
Sbjct: 56  GKMLRAKMAIQSASLAEIDISTSLLWAGAVEVLHNASLIHDDI--CDGDKQRRGRESIWV 113

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS 132
           ++   TA+  G+ L+  +FE+ S
Sbjct: 114 KFGRDTALTLGDWLIALSFELAS 136


>gi|313681119|ref|YP_004058858.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977]
 gi|313153834|gb|ADR37685.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977]
          Length = 329

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 13/192 (6%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  LV   A  +  +   AL V AA+E    + L+HDD+   D+   RRG+
Sbjct: 37  YPERGGKMLRGRLVVLTARAYG-DDTAALGVAAALELFQNWVLVHDDI--EDDSDERRGR 93

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLG 161
           P +H       A+ AG+ L    + +++    + K  +    ++  T    ++ L   L 
Sbjct: 94  PALHRLVPMPLALNAGDALHAAMWRLLAEAGARRKVLLEFAELVETTASGQHLDLSWTLE 153

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           G+     D++++     M+++             GA++A    +        G  LG+ F
Sbjct: 154 GRFDLTPDDYLE-----MVRRKAAYYTAVAPLRLGALVAGRMPDPA--FARAGLELGVAF 206

Query: 222 QLADDLLDCEED 233
           Q+ DD+L+ E D
Sbjct: 207 QIVDDVLNLEGD 218


>gi|315186189|gb|EFU19951.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578]
          Length = 357

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 34/224 (15%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL   +R     GK +R  LV   A +          RVGAA+E      L+HDD+  M
Sbjct: 45  ERLFGFVRR----GKLVRGALVWAGARVCGGAPEEWCARVGAALELFQSGLLVHDDV--M 98

Query: 96  DNGYIRRGKPTVHIQYD---------------EVTAIIAGNGLLTYAFEIISSPKTQLKD 140
           D   +RRG P++  QY+               E  A+  G+      F +++        
Sbjct: 99  DRDRVRRGGPSMFAQYEGRADEEGVREARRVGEALAVCVGDVAFFLGFGLLAGVGRGAA- 157

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGAL-MCFACES 195
            +R  L+  +       G+   QM D+        +    V  + + KTG          
Sbjct: 158 -MRDALLRCVAEEYARVGVA--QMDDVWYGATGGGVSLDDVLRVYRYKTGRYTFSVPLSL 214

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADD---LLDCEEDLPK 236
           GA++A A +  +  L   GE LG++FQ+ DD   L   EE++ K
Sbjct: 215 GALLAGADEGVRGALEEVGELLGVVFQIRDDELGLFGSEEEIGK 258


>gi|148273051|ref|YP_001222612.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147830981|emb|CAN01926.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 373

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 55/260 (21%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYA---LLGGKKIRS-FLVTECASLFNVNHLT 71
           + T LDD L   A+ ++    D L+    ++   L GGK+ R+ F      S+ ++    
Sbjct: 11  VQTRLDDFLAAQAAGLREISPD-LVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSP 69

Query: 72  ALR--------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----- 112
           A R              V A +E  H  +L+HDD+  +D    RRG+P  H +++     
Sbjct: 70  AGRPQGEERPGYRAVVGVAAGLEIFHAAALVHDDI--IDRSDTRRGRPAAHRRFEALHAA 127

Query: 113 -----------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                      E  A + G+ LL ++ E++      L D   ++   +    +  Q  LG
Sbjct: 128 SGWGGSSASFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELAMMRTQVTLG 187

Query: 162 GQMLDIQDEFIDETQ-------------VFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            Q LD+ +E    T              V+   K    A +      GA +A A+  +  
Sbjct: 188 -QYLDVLEEVAWPTVPEEDTLARAHNVIVYKSAKYSIEAPLVV----GANLAGATPEQVT 242

Query: 209 RLRCFGENLGIIFQLADDLL 228
            LR  G  LGI FQL DD+L
Sbjct: 243 ALRAVGLPLGIAFQLRDDVL 262


>gi|46015923|pdb|1V4J|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima V73y Mutant
 gi|46015924|pdb|1V4J|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima V73y Mutant
          Length = 299

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E  H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELYHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|255578548|ref|XP_002530137.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223530362|gb|EEF32253.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 417

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   ++S K    
Sbjct: 166 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLKNT-- 221

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S L   + H +  + M   QM    ++             KT +L+  +C++ A++
Sbjct: 222 -EVVSLLATVVEHLVTGETM---QMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIALL 277

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  +         +G+NLG+ FQL DD+LD
Sbjct: 278 AGQTAEVAMLAFEYGKNLGLAFQLIDDVLD 307


>gi|300784232|ref|YP_003764523.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei
           U32]
 gi|299793746|gb|ADJ44121.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei
           U32]
          Length = 363

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 38/218 (17%)

Query: 40  LSAIR-YALLGGKKIRSFLVT-----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + A+R + L GGK++R                  +    L+  A++E I   +LIHDDL 
Sbjct: 40  IDALRGFVLGGGKRLRPTFAWWGWRGAGGDPAGPDAEGVLQAVASLELIQACALIHDDL- 98

Query: 94  SMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISS---P 134
            +D+   RRG PTVHI                 +   TA++ G+  L +A ++ +    P
Sbjct: 99  -IDSSDSRRGNPTVHIAGAKLHADRGWLGSPATFGLATAVLVGDLALAWADDMFADADLP 157

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMC- 190
              L    R       T       +L GQ LD++ +   +  V     I ++KT A    
Sbjct: 158 AETLA-AARPAWRAMRTE------VLAGQYLDVRTQATGDASVEAALKIDRLKTAAYTVQ 210

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                GA +  A+      L  FG  +G+ FQL DDLL
Sbjct: 211 RPLHLGAALGGAAPELIATLLEFGGEVGVAFQLRDDLL 248


>gi|302688307|ref|XP_003033833.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8]
 gi|300107528|gb|EFI98930.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8]
          Length = 382

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 27/198 (13%)

Query: 52  KIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + R  L+T  A   +V    AL    R+   +E IH  SL+HDD+  +D    RRG  + 
Sbjct: 91  RPRLILLTALAVNASVGERDALPQQVRLAEVVEMIHVVSLLHDDV--IDESDTRRGDMSA 148

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQG------- 158
             +Y    +I+AG+ +L  A  +I++      D +R  + ++ +L     +Q        
Sbjct: 149 PARYGNKNSILAGDFVLGRAMSLIAT--LGHFDAMREIAGVVTTLVEGEIIQAEDSIALS 206

Query: 159 --MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--FG 214
                GQ  D    +++  ++F    +KTG+L   A  S A+++    +++  L    +G
Sbjct: 207 DKARAGQAADQWGSYME--RIF----LKTGSLFARALRSTAMLSGLPSDDERVLAVGDYG 260

Query: 215 ENLGIIFQLADDLLDCEE 232
             LG+ FQ+ DD LD +E
Sbjct: 261 TELGLAFQIIDDALDFKE 278


>gi|82659078|gb|ABB88703.1| geranyl pyrophosphate synthase [Solanum lycopersicum]
          Length = 415

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   ++S K    
Sbjct: 164 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT-- 219

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             +   L   + H +  + M   QM    DE             KT +L+  +C++ A++
Sbjct: 220 -EVVCLLATVVEHLVTGETM---QMTTSSDERCSMEYYMQKTYYKTASLISNSCKAIALL 275

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  S         +G+NLG+ FQL DD+LD
Sbjct: 276 AGHSAEVSVLAFDYGKNLGLAFQLIDDVLD 305


>gi|239946000|ref|ZP_04697937.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 15998]
          Length = 323

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 26/197 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A     +    +    A+E IH +SLIHDD+  MD    RR +PT+  
Sbjct: 34  GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 91

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQM 164
            Y    A++AG+ L   A   ++ +P       +R            L G LG    GQ 
Sbjct: 92  AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQ-----------LAGALGDLVHGQA 140

Query: 165 LDIQDEFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            D+  E    +        +   +   KTG+L+  A   GA +A A  +  E L   G +
Sbjct: 141 QDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRH 200

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQ  DDLL    D
Sbjct: 201 VGVAFQAVDDLLGIWGD 217


>gi|170117033|ref|XP_001889705.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635285|gb|EDQ99594.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 325

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 20/226 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
           + DTILD L          Q+   +L    +     GK+IR  L+    +  NV   T L
Sbjct: 3   KYDTILDTL--SAKPTWSAQNESAILEPFTFITSNPGKEIRGKLIEAFNTWLNVPTDTLL 60

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-- 131
            +   +  +H  SL+ DD+   D+  +RRGKP  H  Y     I   N +   A++ +  
Sbjct: 61  VITKVVNMLHAASLMVDDIE--DDSQLRRGKPVAHKIYGIPQTINTANYVYFLAYQELFA 118

Query: 132 ------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
                 +SP  +  D + ++ +LSL    GL+ +L    L    E   E  + M+   KT
Sbjct: 119 LRNNPTTSPPRKDLDALVTEELLSLHRGQGLE-ILWRDSLQCPSE---EEYISMVNN-KT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           G L+    +   +MA  + N           +G+ FQ+ DDL++ +
Sbjct: 174 GGLLRMGVK--IMMACGTTNIGVDYVPLVNLIGVFFQIRDDLMNLQ 217


>gi|328954813|ref|YP_004372146.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
           [Coriobacterium glomerans PW2]
 gi|328455137|gb|AEB06331.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Coriobacterium glomerans PW2]
          Length = 363

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 17/195 (8%)

Query: 44  RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           R++  GGK+ R  +    A     +   AL V  AIE     +LIHDD+   D G  RRG
Sbjct: 70  RFSRNGGKRHRPLICMLAARAVGGDAAAALDVATAIEHFQSAALIHDDIA--DRGNTRRG 127

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIG--LQGML 160
            P +H+   E  AI  G+       E+IS     L D N+  +L + L   +    +  +
Sbjct: 128 APCLHVTEGEGIAINCGD------LELISMTAAVLDDANLGDELKIRLLRELVEMTRRTI 181

Query: 161 GGQMLDI---QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GQ LD+   +D   D   E  + M  +             GAI     + + E LR FG
Sbjct: 182 EGQALDLGWARDARYDLTVEDYLDMATRKTAWYSGAVPLACGAIAGGGCEVQVEGLRSFG 241

Query: 215 ENLGIIFQLADDLLD 229
              G+ FQ+ DDL++
Sbjct: 242 LACGLAFQIQDDLIN 256


>gi|49259559|pdb|1VG7|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima
           F132aL128AI123AD62A MUTANT
          Length = 299

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           +  +N   +  L++        M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EAGNNKARRAALNVIGK-----MSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALL---EGELGEDLYNLGVTIGTIYQMFDDIMD 208


>gi|239992468|ref|ZP_04713132.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 11379]
          Length = 349

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 26/197 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A     +    +    A+E IH +SLIHDD+  MD    RR +PT+  
Sbjct: 60  GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 117

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQM 164
            Y    A++AG+ L   A   ++ +P       +R            L G LG    GQ 
Sbjct: 118 AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQ-----------LAGALGDLVHGQA 166

Query: 165 LDIQDEFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            D+  E    +        +   +   KTG+L+  A   GA +A A  +  E L   G +
Sbjct: 167 QDLLFESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRH 226

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQ  DDLL    D
Sbjct: 227 VGVAFQAVDDLLGIWGD 243


>gi|118586922|ref|ZP_01544355.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni
           ATCC BAA-1163]
 gi|118432649|gb|EAV39382.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni
           ATCC BAA-1163]
          Length = 325

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 17/156 (10%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +LIHDD+  +D    RRG  ++  Q+ + TA+ +G+ L    F +++    +   + 
Sbjct: 80  HMATLIHDDV--IDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLA----EYASDF 133

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC-----ESGA 197
           R         N  L G +  QM++  D  I   Q F     KTG L   A      ESG 
Sbjct: 134 RGIQQYGHHMNAILNGEMT-QMVERYDLNISIDQYFKQISGKTGQLFSLATFLGAYESGN 192

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +  A   EK      G N+G+ FQL DD+LD  ++
Sbjct: 193 KIKFAKNAEK-----IGLNIGVSFQLMDDILDYTDN 223


>gi|283458392|ref|YP_003363016.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
 gi|283134431|dbj|BAI65196.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
          Length = 410

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 95/248 (38%), Gaps = 78/248 (31%)

Query: 39  LLSAIRYALLGGKKIRSFL------------VTECASLFNVNHLTALRVGAAIECIHCYS 86
           LL AI     GGK++R+ L            VTE  + +++     ++ G A+E     +
Sbjct: 72  LLEAIESLSTGGKRLRALLSYWGWRGAGGAPVTENRASWSI-----VKAGMAVELFQTSA 126

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEI 130
           LIHDD+  +D    RRG P+VH +++                    I+AG+  L ++ E+
Sbjct: 127 LIHDDI--IDRSDTRRGAPSVHKRFEAAHEQNSWRGDAFNYGLTGGILAGDLTLAWSAEV 184

Query: 131 ISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET------ 175
            +S         P   + D +R++             +L GQ LD+  E ++        
Sbjct: 185 FASLGEGAIYGAPARTIFDRMRTE-------------VLAGQYLDVYSEVLETEDAQAAL 231

Query: 176 -QVFMIQKMKTG--------------ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            +   + + K+               AL   A E+G              R FG  LG  
Sbjct: 232 QRALNVIRFKSAKYSCEHPFTIGGALALQATALENGTGAVSEQHPVLAGYRAFGLPLGEG 291

Query: 221 FQLADDLL 228
           FQL DD L
Sbjct: 292 FQLRDDEL 299


>gi|111221595|ref|YP_712389.1| geranylgeranyl pyrophosphate synthase [Frankia alni ACN14a]
 gi|111149127|emb|CAJ60810.1| Geranylgeranyl pyrophosphate synthase (Farnesyl diphosphate
           synthase, Bifunctional short chain isoprenyl diphosphate
           synthase) [Frankia alni ACN14a]
          Length = 358

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 37/213 (17%)

Query: 47  LLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           L GGK++R +F           +    +   AA+E +H  +L+HDD+  MD   +RRG P
Sbjct: 42  LSGGKQVRPAFCYWGWRGAGGPDCDEIVTAAAALEVLHACALVHDDV--MDGSQLRRGAP 99

Query: 106 T-------VHIQ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           +       VH +         +    AI+ G+  LT+A +++ +  + L     ++   +
Sbjct: 100 SAQRRLTLVHRRARLGGDPDTFGRSAAILLGDLFLTWADDLLMA--SGLTPGALARAWPT 157

Query: 150 LTHNIGLQGMLGGQMLDIQDEF-------------IDETQVFMIQKMKT-GALMCFACES 195
                G   ++ GQ LD+  +              +D  +V  I + KT G  +    + 
Sbjct: 158 YARMRGE--LVAGQYLDLASQVGPGASQGGAGGGQVDPARVARIARYKTAGYTVVRPLQL 215

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           GA++A +     E    FG  LG  FQL DD+L
Sbjct: 216 GALLAGSRPGLLETYAAFGHPLGEAFQLRDDVL 248


>gi|283783163|ref|YP_003373917.1| polyprenyl synthetase [Gardnerella vaginalis 409-05]
 gi|298253930|ref|ZP_06977517.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1]
 gi|283441784|gb|ADB14250.1| polyprenyl synthetase [Gardnerella vaginalis 409-05]
 gi|297532073|gb|EFH71048.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1]
          Length = 368

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 39/214 (18%)

Query: 49  GGKKIRSFLVTEC-------ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           GGK++R+ L            ++  ++  +   +  A+E     +LIHDD+  +D  Y+R
Sbjct: 55  GGKRLRALLTISAFYAASKETNIQKIHEQSVFDIACALEVFQTAALIHDDI--IDESYLR 112

Query: 102 RGKPTVHIQYDEV---------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML---- 148
           RGKP+ +    +V           ++ G+ L T +F+I    + + K+    + +L    
Sbjct: 113 RGKPSAYCALSKVCNNKHIGTGLGLMLGDLLATESFDI---ARNRAKNFTYGEELLAAFA 169

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACES-GAIMA 200
           S+  N+G+     GQ+LD+  E +              + + KT +    A  + G + A
Sbjct: 170 SMQRNVGI-----GQVLDLSIEMMQLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAA 224

Query: 201 HASQNEKERL-RCFGENLGIIFQLADDLLDCEED 233
           +    E   L    G +LG+ FQ+ADDLLD   D
Sbjct: 225 NMQPTEAYNLANSIGNSLGVAFQIADDLLDIVSD 258


>gi|116491107|ref|YP_810651.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
 gi|290890612|ref|ZP_06553683.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429]
 gi|116091832|gb|ABJ56986.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
 gi|290479740|gb|EFD88393.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429]
          Length = 325

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 17/156 (10%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +LIHDD+  +D    RRG  ++  Q+ + TA+ +G+ L    F +++    +   + 
Sbjct: 80  HMATLIHDDV--IDESPTRRGMSSIQKQFGQSTAVYSGDYLFVVCFNLLA----EYASDF 133

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC-----ESGA 197
           R         N  L G +  QM++  D  I   Q F     KTG L   A      ESG 
Sbjct: 134 RGIQQYGHHMNAILNGEMT-QMVERYDLNISIDQYFKQISGKTGQLFSLATFLGAYESGN 192

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +  A   EK      G N+G+ FQL DD+LD  ++
Sbjct: 193 KIKFAKNAEK-----IGLNIGVSFQLMDDILDYTDN 223


>gi|153799412|gb|ABS50482.1| NapT7 [Streptomyces sp. CNQ525]
          Length = 357

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 41/207 (19%)

Query: 49  GGKKIR-SFLVT-ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R +F +T   A+  +      +   A +E +H  +LIHDD+  +DN   RRGKPT
Sbjct: 66  GGKRVRPTFCITGYLAAGGDPRDPGIVAAAAGLEMLHVSALIHDDI--LDNSAQRRGKPT 123

Query: 107 VHIQY----------------DEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLS 149
           +H  Y                 E   I+ GN  L Y+ E++  +P   L +  R    L 
Sbjct: 124 IHTLYGDLHDSHGWRGESRRFGEGIGILIGNLALVYSQELVCQAPPAVLAEWHR----LC 179

Query: 150 LTHNIGLQGMLGGQMLDI--QDEFIDETQVF-MIQKMKTGALMCFACESGAIMAHASQNE 206
              NI       GQ LD+    EF  + Q+  ++  +K+G    +      +M   + + 
Sbjct: 180 SEVNI-------GQCLDVCAAAEFSADPQLSRLVALIKSGR---YTIHRPLVMGANAASR 229

Query: 207 KERLRC---FGENLGIIFQLADDLLDC 230
            +       +GE +G  FQL DDLLD 
Sbjct: 230 PDLAAAYVEYGEAVGEAFQLRDDLLDA 256


>gi|126180126|ref|YP_001048091.1| polyprenyl synthetase [Methanoculleus marisnigri JR1]
 gi|125862920|gb|ABN58109.1| Polyprenyl synthetase [Methanoculleus marisnigri JR1]
          Length = 295

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 24/228 (10%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN 66
             +E  ++I  ++D  + +TA          + SA+   L  GK++R+ L+    A L  
Sbjct: 3   PFREFLEKIRPVVDRRIAETAGG-----EGEIDSAVLALLSKGKRMRAGLLLYIHAGLAR 57

Query: 67  VNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               T  AL +  A+E  H  SLI DD+  +D    RRG P++H+   E  A++   G+L
Sbjct: 58  TAAPTRQALDLACAVELAHAASLILDDM--LDGDTARRGVPSLHLTRGEGRAVLDAVGIL 115

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
              +  +++P       + +     +   +  + MLGG  L    E  D      I   K
Sbjct: 116 ALPYA-LAAPYGAGYVTMLASAQRKMARGVAWE-MLGGPDLPAA-ELYDA-----IVARK 167

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLD 229
           TG L   A   GA++   +  E   +  FGE     G   Q+ADD+ D
Sbjct: 168 TGCLFSLAAAWGAMV---TGKEDAVVAAFGEFGLAAGKAMQVADDIAD 212


>gi|49259558|pdb|1VG6|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima
           F132aL128AI123A Mutant
          Length = 299

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           +  +N   +  L++        M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EAGNNKARRAALNVIGK-----MSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|323454000|gb|EGB09871.1| hypothetical protein AURANDRAFT_36976 [Aureococcus anophagefferens]
          Length = 439

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 25/189 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHL---------TALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           GK+ R  +V   A    V H             R+G   E IH  SLIHDD+  +D+   
Sbjct: 150 GKRFRPTIVALMAKALPVVHARDDAETCKAKQDRLGQITEMIHVASLIHDDV--LDDADT 207

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG   +H  Y    A+++G+ LL  A  +++  + +    + ++ + SL    G Q   
Sbjct: 208 RRGGDAIHKMYSNKVAVLSGDYLLARASVLLARLQHKQVVEVMAKALDSLLGKDGKQ--- 264

Query: 161 GGQMLDIQDEFIDETQVFMIQK-MKTGALMCFACESGAIMA-----HASQNEKERLRCFG 214
             +  +I      E ++++ +   KT +L+C A +S A++A      A+    E    +G
Sbjct: 265 --KKSEIAARDAKEMELYLRKSYYKTASLICDASKSCALLAGHDFDSATARAAEE---YG 319

Query: 215 ENLGIIFQL 223
            +LG+ FQ+
Sbjct: 320 YHLGLAFQI 328


>gi|29420495|dbj|BAC66492.1| farnesyl diphosphate synthase [Streptomyces argenteolus]
          Length = 346

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 17/191 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR  LV   A         AL    A+E  H +SL+HDD+  MD    RR +PT  
Sbjct: 61  GGKAIRPALVLLAAEAVGGAADAALPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAW 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             +    AI+AG+ LL  AF+++++   P       I             +Q +L GQ  
Sbjct: 119 TVFGVSPAILAGDALLALAFDVLATAGHPAAPEATRI---------FGAAIQELLEGQNA 169

Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  E    ++  +  ++   KTGAL+  AC  GA++   +  + E LR FG +LG+ FQ
Sbjct: 170 DMAFERRQDVELAECLVMAAGKTGALLGCACALGALLGGGAPEQVEHLRAFGRDLGLAFQ 229

Query: 223 LADDLLDCEED 233
           L DDLL    D
Sbjct: 230 LVDDLLGIWGD 240


>gi|328884962|emb|CCA58201.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or
           Geranyltranstransferase (farnesyldiphosphate synthase)
           or Geranylgeranyl pyrophosphate synthetase [Streptomyces
           venezuelae ATCC 10712]
          Length = 349

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS---PKTQLK 139
           H ++L+HDD+  +D    RR + T    +    A+IAG+ +   A  +++    P +   
Sbjct: 97  HNFTLLHDDI--VDEDVTRRHRATAWTVFGVPDALIAGDAMSALALRMLAEDPHPASAAA 154

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
               +  ++ L    G Q     +    ++  +DE     +   KTGAL+  +C  GA+ 
Sbjct: 155 SARLAACIIELC--AGQQADCAFEQRGPREVSLDE--CLAMATAKTGALLGASCAIGALY 210

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228
           A A + E   +  FG   G+ FQL DDL+
Sbjct: 211 AGAGEEEVAAMDAFGREAGLAFQLIDDLI 239


>gi|68474524|ref|XP_718635.1| hypothetical protein CaO19.7478 [Candida albicans SC5314]
 gi|46440414|gb|EAK99720.1| hypothetical protein CaO19.7478 [Candida albicans SC5314]
          Length = 510

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 56/210 (26%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN---GLLTYAFEI 130
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+   G  + A   
Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256

Query: 131 ISSPKT-----------------QLKDNI--------------------RSQLMLSLTHN 153
           + +P+                  QLK+ +                     +  + +  H 
Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316

Query: 154 IGLQ-------GMLGGQMLD---IQDEFIDETQVF--MIQK--MKTGALMCFACESGAIM 199
             +Q       G  GG   D   + D  I+    F   + K  +KT +LM  +C + A++
Sbjct: 317 YSVQQQQRTTNGGNGGDSADAAVVVDHEINVEAAFEYYLHKTYLKTASLMSKSCRAAAVL 376

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A  +  E    FG NLG+ FQ+ DD+LD
Sbjct: 377 SGAQDDIIENCYQFGRNLGLCFQIVDDMLD 406


>gi|308177871|ref|YP_003917277.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
 gi|307745334|emb|CBT76306.1| putative farnesyltranstransferase [Arthrobacter arilaitensis Re117]
          Length = 368

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 52/190 (27%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE----------------VTA 116
           +R+G A+E     +LIHDD+  +DN   RRG+P+VH +++                  +A
Sbjct: 86  VRLGVALELFQAAALIHDDI--IDNSDTRRGQPSVHKRFEAQHQELELAGSARNYGMASA 143

Query: 117 IIAGNGLLTYAFEI---ISSPKTQLK---DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           I+ G+  L+ + E+   ISS   Q +   + +R+Q+M              GQ LD+ +E
Sbjct: 144 ILTGDLCLSLSEEVFSEISSLTAQARTIFNQMRTQVM-------------AGQYLDVLEE 190

Query: 171 FIDET--------QVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLG 218
                        +   I + K+     ++ E+    G  +A AS++  E    F   LG
Sbjct: 191 SAGPAYDPKEAVKRARTIVRFKSAK---YSTENPFLLGGALAGASESLMEHYSAFALPLG 247

Query: 219 IIFQLADDLL 228
             FQL DD+L
Sbjct: 248 EAFQLRDDVL 257


>gi|303282127|ref|XP_003060355.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457826|gb|EEH55124.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 311

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 14/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG   ++++     AI+AG+ LL  A   ++S
Sbjct: 54  RLAEITELIHVASLLHDDV--LDHAATRRGLRALNLEVGNKLAILAGDFLLARASVTLAS 111

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMC 190
                   +R+  +++L   + L+ ++ G   QM    D        F     KT +L+ 
Sbjct: 112 --------LRNTEVIALLSRV-LEHLVTGEVMQMTAKADRLTSFDHYFQKTYFKTASLIA 162

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + ++  ++        E    +G +LG+ FQ  DD+LD
Sbjct: 163 NSAKAIVLLGGHDVTTAESAYQYGRHLGLAFQFQDDVLD 201


>gi|255023840|ref|ZP_05295826.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208]
          Length = 145

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 3/93 (3%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R +F +    +  + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+
Sbjct: 46  GGKLLRPAFALLSAQAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
           H +Y    A+  G+ L    F+I+S+  + +++
Sbjct: 104 HSKYGRNYAVYTGDYLFCICFKILSAHASSVEN 136


>gi|330469543|ref|YP_004407286.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
 gi|328812514|gb|AEB46686.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
          Length = 355

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 26/205 (12%)

Query: 44  RYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           R+ L GGK++R  F      +    +    +   AA+E  H ++LIHDD+  +D    RR
Sbjct: 46  RFVLAGGKRLRPLFCYWGWRAAGGPDSTPIVTAAAALELFHAFALIHDDI--LDGSDRRR 103

Query: 103 GKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           G+P+VH                  Y   TA++ G+    ++ ++        +   R   
Sbjct: 104 GEPSVHRIFADLHTRSSWRGDPEAYGRNTALLCGDLCAAWSDQMFHECGLDAESVHRGYA 163

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGAL-MCFACESGAIMAHAS 203
           + SL        ++ G+ LD+       +      + +MK     +    + GA +A AS
Sbjct: 164 VFSLMRT----EVIAGEYLDLVSGVGGGSVASALTVIRMKAARYTVTRPLQIGATLAGAS 219

Query: 204 QNEKERLRCFGENLGIIFQLADDLL 228
               + L  FG+ LG  FQL DD+L
Sbjct: 220 SELVDALAEFGDPLGDAFQLRDDVL 244


>gi|302689483|ref|XP_003034421.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8]
 gi|300108116|gb|EFI99518.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8]
          Length = 382

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 27/198 (13%)

Query: 52  KIRSFLVTECASLFNVNHLTAL----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + R  L+T  A   +V    AL    R+   +E IH  SL+HDD+  +D    RRG  + 
Sbjct: 91  RPRLILLTALAVNASVGERDALPQQVRLAEIVEMIHVVSLLHDDV--IDESDTRRGDLSA 148

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQG----MLG 161
             ++    +I+AG+ +L  A  +I++   +  D +R  + ++ +L     +Q      LG
Sbjct: 149 PSKFGNKNSILAGDFVLGRAMSLIAA--LENFDAMREIAGVVTTLVEGEIIQAEDSIALG 206

Query: 162 -----GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--FG 214
                GQ  D    +++  ++F    +KTG+L   A  S A+++    +++  L    +G
Sbjct: 207 EKAKVGQAADQWGSYME--RIF----LKTGSLFARALRSTAMLSGLPSDDERVLAVGDYG 260

Query: 215 ENLGIIFQLADDLLDCEE 232
             LG+ FQ+ DD LD +E
Sbjct: 261 TELGLAFQIIDDALDFKE 278


>gi|187736086|ref|YP_001878198.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426138|gb|ACD05417.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 336

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 8/180 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A          +R+GA +E +H  SL+HDD+  +D    RR + T + 
Sbjct: 53  GKMLRPALVLLVAGATGGIKPAHIRLGALLEMVHLASLVHDDV--IDEADKRRDEATANA 110

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ L ++A  +     T+       + + +   N+  QG +  Q   + D
Sbjct: 111 LWGNSLAVLLGDVLFSHAMVL----GTEFGSTEFCRRLANTVRNV-CQGEVA-QSSRLYD 164

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +   + F I + KT +L   A      ++  +   +E L   G+ LG+ +Q+ DD LD
Sbjct: 165 LSMTREEYFEIIRKKTASLFSAATGGAGWISGVTPEVEESLYQLGDLLGVAYQIYDDCLD 224


>gi|158979015|gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
          Length = 313

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 12/144 (8%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134
           I  +H  + +H+ LP  D G     KP +  +Y     ++ G+G++ + FE+++      
Sbjct: 116 IHLVHAAAYVHEHLPLTD-GSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 174

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190
           +T   D I  ++++ ++   G +GM+ G  L  ++E +D  T +  I+   K K G +  
Sbjct: 175 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 231

Query: 191 FACESGAIMAHASQNEKERLRCFG 214
                GAI+  A++ E ++LR FG
Sbjct: 232 CGAACGAILGGAAEEEIQKLRNFG 255


>gi|148887805|gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha haplocalyx
           var. piperascens]
          Length = 313

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 12/144 (8%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134
           I  +H  + +H+ LP  D G     KP +  +Y     ++ G+G++ + FE+++      
Sbjct: 116 IHLVHAAAYVHEHLPLTD-GSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 174

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190
           +T   D I  ++++ ++   G +GM+ G  L  ++E +D  T +  I+   K K G +  
Sbjct: 175 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 231

Query: 191 FACESGAIMAHASQNEKERLRCFG 214
                GAI+  A++ E ++LR FG
Sbjct: 232 CGAACGAILGGAAEEEIQKLRNFG 255


>gi|296454314|ref|YP_003661457.1| polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301]
 gi|296183745|gb|ADH00627.1| Polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301]
          Length = 360

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 33/206 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +     +T  R  A      AIE     +L+HDD+  +D   +RR
Sbjct: 52  GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108

Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
           GKP+ H   ++     AI  G GL+      T   EI     ++L + N  ++  L++  
Sbjct: 109 GKPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTNALNEAFLTMQR 168

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHASQN 205
            + +     GQ+LD+  E   + + +        + + KT +    A    A++A     
Sbjct: 169 EVEI-----GQILDLAVEMTPLSDPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223

Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229
           ++ R      G  LG+ FQLADDLLD
Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249


>gi|54024172|ref|YP_118414.1| polyprenyl synthase [Nocardia farcinica IFM 10152]
 gi|54015680|dbj|BAD57050.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
          Length = 385

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 23/197 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GK++R+ L   CA L           AL +    E  H  SL+HDD+   D   +RR  P
Sbjct: 101 GKRVRAGLALACAQLIPSPDAAPVHDALDIACVWEMFHESSLVHDDI--CDGSPLRRDAP 158

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLG 161
           +V   +    A  AG  L   A ++++     + DN  +         +T+   L  +  
Sbjct: 159 SVPAAFGVRRAARAGFHLAGKALQVLAR---VIADNPAAFGTVGTAAGVTYLDRLSDLSL 215

Query: 162 GQMLDIQDEFIDETQV----FMIQKMKTGALMCFACESGAIMAHASQNEKERLR---CFG 214
           GQ+++     +D   +      +   KTG L   AC  G     A   E +RLR    + 
Sbjct: 216 GQLVETIPPTVDHRALRGHYARVAAAKTGTLFRLACAYGGT---AGALEHDRLRDLMDYA 272

Query: 215 ENLGIIFQLADDLLDCE 231
           E L   FQ+ DD+ D +
Sbjct: 273 ERLAFAFQVMDDVRDVD 289


>gi|152967171|ref|YP_001362955.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361688|gb|ABS04691.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
          Length = 365

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 41/255 (16%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV----- 58
           P    +  + +  +LD+ L   AS ++    D   +L AI   L GGK++R         
Sbjct: 9   PVATSDLRRAVSDVLDEFLRDQASVLREVSEDCAPVLDAISALLSGGKRLRPAFCYWGFH 68

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---- 114
                L +   +TA    A++E     +LIHDD+  MD+   RRG+P  H +++ +    
Sbjct: 69  GTGGELPDEGIVTA---AASLELFQAAALIHDDV--MDDSDTRRGQPAAHRRFEALHARS 123

Query: 115 ------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                        A++AG+  L ++ E+ S  +       R + +     N+    ++GG
Sbjct: 124 GWDGSRERFGLAGAVLAGDLCLGWSDELFSRARLAPDALDRGRRIF----NVMRTQLMGG 179

Query: 163 QMLDI-----QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCF 213
           Q LD+      D+   +  V   +++ T     ++ E     G  +A AS +       F
Sbjct: 180 QYLDMLEQASSDQRGTDGAVDRARRVVTFKSAKYSIEHPLLLGGSLAGASTDLLADYSRF 239

Query: 214 GENLGIIFQLADDLL 228
           G  LG  FQL DD+L
Sbjct: 240 GLALGEAFQLRDDVL 254


>gi|51598574|ref|YP_072762.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi]
 gi|51573145|gb|AAU07170.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi]
          Length = 347

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%)

Query: 49  GGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GG +IR  L+   A    L   N     ++   +E  H  SLI DD+   DN   RRG+ 
Sbjct: 57  GGDRIRPMLMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--DNSLKRRGRS 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +H+ Y    +I AGN  L Y        ++ LK+N   +L++   +   L  +  GQ +
Sbjct: 115 AIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENYFTTLSNLHLGQGI 170

Query: 166 DIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    F + LG+ F
Sbjct: 171 DIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKLYSTFLK-LGVYF 229

Query: 222 QLADDLLDCEEDL 234
           Q+ DD+ + +  +
Sbjct: 230 QIIDDIKNIKNKI 242


>gi|282162809|ref|YP_003355194.1| polyprenyl synthetase [Methanocella paludicola SANAE]
 gi|282155123|dbj|BAI60211.1| polyprenyl synthetase [Methanocella paludicola SANAE]
          Length = 342

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +RS +        + +   AL   AA+E +H +SLIHDD+   D    RR + T+  
Sbjct: 56  GKSLRSTMCLLACEAISGDSNKALPAAAAVELLHNFSLIHDDIE--DGDVKRRHRDTLWK 113

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLD 166
            +    AI  G+     A +I ++     L   +   +M+ +    N  +  +  GQ LD
Sbjct: 114 LWGVPQAINTGD-----AMDIAANLSLLDLDGTVEPGMMVDIIRIFNQTVIELCEGQYLD 168

Query: 167 IQDEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +  +   +  V     M   KT AL+  +   GA++A   ++   R   FG  +GI FQ+
Sbjct: 169 MDFQGRSDVSVGEYITMVSGKTAALIEASTAIGAMVATGDRDVISRFGTFGRKIGIAFQI 228

Query: 224 ADDLL 228
            DD+L
Sbjct: 229 RDDIL 233


>gi|111115139|ref|YP_709757.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo]
 gi|216263882|ref|ZP_03435876.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1]
 gi|110890413|gb|ABH01581.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo]
 gi|215979926|gb|EEC20748.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1]
          Length = 347

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%)

Query: 49  GGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  ++   A    L   N+    ++   +E  H  SLI DD+   DN   RRG  
Sbjct: 57  GGKRIRPMIMILLAYALGLKEKNNKLIYKLSLLLELPHSGSLIIDDIE--DNSLKRRGAS 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +H+ Y    +I AGN  L Y        ++ LK+N   +L++       L  +  GQ +
Sbjct: 115 AIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSNLHLGQGI 170

Query: 166 DIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    F + LG+ F
Sbjct: 171 DIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFLK-LGVYF 229

Query: 222 QLADDLLDCEEDL 234
           Q+ DD+ + +  +
Sbjct: 230 QIIDDIKNIKNKI 242


>gi|315586238|gb|ADU40619.1| polyprenyl synthetase [Helicobacter pylori 35A]
          Length = 307

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + A +E I   SL+HDD+  +D   +RR  P+++  +    A+I G+   + AF  +
Sbjct: 59  ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVILGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S            +L+     N  L+   G    +I+D F+      D+ + + I + KT
Sbjct: 117 SK---------MGELIAKALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|219684533|ref|ZP_03539476.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr]
 gi|219671895|gb|EED28949.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr]
          Length = 347

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 14/202 (6%)

Query: 40  LSAIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L AI     GGK+IR  ++   A    L   N     ++   +E  H  SLI DD+   D
Sbjct: 48  LPAIEIINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--D 105

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG   +H+ Y    +I AGN  L Y        ++ LK+N   +L++       L
Sbjct: 106 NSLKRRGGSAIHLIYGTDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTL 161

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             +  GQ +DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    
Sbjct: 162 SNLHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYST 221

Query: 213 FGENLGIIFQLADDLLDCEEDL 234
           F + LG+ FQ+ DD+ + +  +
Sbjct: 222 FLK-LGVYFQIIDDIKNIKNKI 242


>gi|6449050|gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
 gi|10637873|emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita]
          Length = 313

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 12/144 (8%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134
           I  +H  + +H+ LP + +G     KP +  +Y     ++ G+G++ + FE+++      
Sbjct: 116 IHLVHAAAYVHEHLP-LTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 174

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190
           +T   D I  ++++ ++   G +GM+ G  L  ++E +D  T +  I+   K K G +  
Sbjct: 175 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 231

Query: 191 FACESGAIMAHASQNEKERLRCFG 214
                GAI+  A++ E ++LR FG
Sbjct: 232 CGAACGAILGGAAEEEIQKLRNFG 255


>gi|58271024|ref|XP_572668.1| trans-hexaprenyltranstransferase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134114824|ref|XP_773710.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256338|gb|EAL19063.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228927|gb|AAW45361.1| trans-hexaprenyltranstransferase, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 483

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 25/173 (14%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+ +  E IH  SL+HDD+  +D+  +RRG P+    +    +I++G+ LL  A   
Sbjct: 217 TQRRLASITEMIHVASLLHDDV--IDSSSLRRGTPSAPSTFGNKLSILSGDFLLGRASVA 274

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVF--MIQK-- 182
           ++    +L      +L+ ++  N     ++ G+M+ +    + E     + F   ++K  
Sbjct: 275 LA----RLGSREVVELLATVIAN-----LVEGEMMQLRATSEPEKAPTAKGFEDYMRKTY 325

Query: 183 MKTGALMCFACESGAIMAH-ASQNE-----KERLRCFGENLGIIFQLADDLLD 229
           +KT +LM  +  +  I+    S +E     K+    +G NLGI FQL DD LD
Sbjct: 326 LKTASLMAKSARAAVILGGCGSVSEEGAWVKDVAYGYGRNLGIAFQLIDDALD 378


>gi|328862405|gb|EGG11506.1| hypothetical protein MELLADRAFT_102532 [Melampsora larici-populina
           98AG31]
          Length = 429

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 39/176 (22%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127
           R+    E IH  SL+HDD+  +D    RR  P+   ++    +I+AG+ LL  A      
Sbjct: 166 RLAEISEMIHVASLLHDDV--IDKASSRRSIPSAPHEFGNKLSILAGDFLLARASIGLAR 223

Query: 128 ------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
                  E+ISS    +  N+    ++ L  N       G     I +E+++++      
Sbjct: 224 LGSLEVVELISS----IISNLVEGELMQLNSN-------GKSNHQIWNEYLEKSY----- 267

Query: 182 KMKTGALMCFACESGAIMA----HASQNEKERLR----CFGENLGIIFQLADDLLD 229
            +KT +LM        ++     H    E E+++     FG++LGI FQ+ DD+LD
Sbjct: 268 -LKTASLMAKTARCATVLGGCGIHQGWEEGEKIKDGVYQFGKHLGIAFQIIDDVLD 322


>gi|289526778|pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium
 gi|289526779|pdb|3KRA|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium
 gi|289526782|pdb|3KRC|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp
 gi|289526783|pdb|3KRC|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp
 gi|289526786|pdb|3KRF|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
 gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
 gi|289526790|pdb|3KRO|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (Ii)
 gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (Ii)
 gi|289526794|pdb|3KRP|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
          Length = 274

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 12/144 (8%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134
           I  +H  + +H+ LP  D G     KP +  +Y     ++ G+G++ + FE+++      
Sbjct: 69  IHLVHAAAYVHEHLPLTD-GSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 127

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190
           +T   D I  ++++ ++   G +GM+ G  L  ++E +D  T +  I+   K K G +  
Sbjct: 128 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 184

Query: 191 FACESGAIMAHASQNEKERLRCFG 214
                GAI+  A++ E ++LR FG
Sbjct: 185 CGAACGAILGGAAEEEIQKLRNFG 208


>gi|208434187|ref|YP_002265853.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27]
 gi|208432116|gb|ACI26987.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27]
          Length = 307

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   IRR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATIRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   I S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIA-QILSNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208


>gi|46015925|pdb|1V4K|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima S77f Mutant
          Length = 299

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H   L+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLAFLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|239918588|ref|YP_002958146.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|281415197|ref|ZP_06246939.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|239839795|gb|ACS31592.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
          Length = 358

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 29/217 (13%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL------RVGAAIECIHCYSLIHDDL 92
           LL ++   +  GK IR  LV     L   + +         R+GAA E +H   L+HDD+
Sbjct: 39  LLDSLHVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDDV 98

Query: 93  PSMDNGYIRRGKPTVHIQYDE-----------------VTAIIAGNGLLTYAFEIISSPK 135
             +D   +RRG+P VH                        A+IAG+ LLT AF + ++  
Sbjct: 99  --IDRDVLRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCA 156

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFA 192
                   +  ++     +   G L   +L +     E  D  ++  +Q++KT      A
Sbjct: 157 ADTARAAEAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGA 216

Query: 193 -CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              +GA++A A  +    +   G +LG  +Q+ DD+L
Sbjct: 217 PLRAGALLAGADPDLARAMGEAGADLGAAYQVIDDVL 253


>gi|256825427|ref|YP_003149387.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
           20547]
 gi|256688820|gb|ACV06622.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
           20547]
          Length = 362

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 41/223 (18%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVT--ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           D L  AI   + GGK++R   +T    A+  + +  T L+   A+E     +L+HDD+  
Sbjct: 37  DELAQAIESLMQGGKRLRPGFLTWGHVAAGGSADEAT-LQAATAMEFFQAAALLHDDV-- 93

Query: 95  MDNGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQL 138
           MD+   RRG P  H  + +                  AI+AG+  L +A    +    + 
Sbjct: 94  MDDSDTRRGTPAAHRVWAQRHREHAFEGSPEDHGIAGAILAGDLCLVWADAAFTGCGWEP 153

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFID----ETQVFMIQKMKTGALM 189
           +  +R++     T N+    ++ GQ LDI +     E +D      +V  + + K+    
Sbjct: 154 EQMLRARP----TWNLMRTQLMAGQFLDILNAARPWETLDTDARHERVRRVMQYKSAK-- 207

Query: 190 CFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            ++ E     GA  A      ++ L  +G +LG+ FQL DD+L
Sbjct: 208 -YSIEHPLLIGADAAGVDPTTRQHLSDYGLHLGLAFQLRDDVL 249


>gi|254819742|ref|ZP_05224743.1| polyprenyl synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 349

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 44/175 (25%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTY 126
           H  +L+HDD+  +D+   RRG+PT H+Q+  +                 AI+ G+  L +
Sbjct: 77  HACALVHDDV--IDDSSTRRGRPTTHVQFATLHRDRGWQGSPERFGASAAILLGDLALAW 134

Query: 127 AFEIIS----SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           A +I+     +P+ Q +      NIR++             +LGGQ LDI  E      +
Sbjct: 135 ADDIVFGIDLTPQAQRRIRRVWANIRTE-------------VLGGQYLDIVAEASAAASI 181

Query: 178 FMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                + T    C+        G   A    +  +    FG +LG+ FQL DD+L
Sbjct: 182 ASAMNVDTFKTACYTVSRPLQLGVAAAADRPDVHDIFSQFGTDLGVAFQLRDDVL 236


>gi|153799383|gb|ABS50454.1| NapT7 [Streptomyces aculeolatus]
          Length = 357

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 41/207 (19%)

Query: 49  GGKKIR-SFLVT-ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R +F +T   A+  +      +   A +E +H  +LIHDD+  +DN   RRGKPT
Sbjct: 66  GGKRVRPTFCITGYLAAGGDAGDPGIVAAAAGLEMLHVSALIHDDI--LDNSAQRRGKPT 123

Query: 107 VHIQY----------------DEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLS 149
           +H  Y                 E   I+ GN  L Y+ E++  +P   L +  R    L 
Sbjct: 124 IHTLYGDLHDSHGWRGESRRFGEGIGILIGNLALVYSQELVCQAPPAVLAEWHR----LC 179

Query: 150 LTHNIGLQGMLGGQMLDI--QDEFIDETQVF-MIQKMKTGALMCFACESGAIMAHASQNE 206
              NI       GQ LD+    EF  + ++  ++  +K+G    +      +M   + + 
Sbjct: 180 SEVNI-------GQCLDVCAAAEFSADPELSRLVALIKSGR---YTIHRPLVMGANAASR 229

Query: 207 KERLRC---FGENLGIIFQLADDLLDC 230
            +       +GE +G  FQL DDLLD 
Sbjct: 230 PDLAAAYVEYGEAVGEAFQLRDDLLDA 256


>gi|237749809|ref|ZP_04580289.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879]
 gi|229374559|gb|EEO24950.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879]
          Length = 421

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 8/91 (8%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L  GK +RS LV     L  V+   A R+ A IE I   SL+HDD+  +D+  +RRGKP+
Sbjct: 29  LESGKMLRSKLV-----LSVVDSDEAYRLCAVIELIQSASLLHDDV--IDSSDLRRGKPS 81

Query: 107 VHIQYDEVTAIIAGNGLLTYA-FEIISSPKT 136
           ++ Q+    AI+ G+ L + A FE+   PK+
Sbjct: 82  LNAQFGNKNAIMLGDILYSRAFFELSHFPKS 112


>gi|257790345|ref|YP_003180951.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243]
 gi|317489792|ref|ZP_07948291.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA]
 gi|257474242|gb|ACV54562.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243]
 gi|316911138|gb|EFV32748.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 349

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 11/191 (5%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y+  GGK+ R  +          +   A    AAIE  H  +LIHDD+   D   +RRG+
Sbjct: 56  YSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDDIA--DEAELRRGE 113

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P +H+      AI AG+  L+     + S +  L D  + +++  L      +  + GQ 
Sbjct: 114 PCMHLTEGMGLAINAGDLALSLVNGTVVSDE-NLDDATKVRVITELIDMT--RRTIEGQA 170

Query: 165 LDI---QDEFIDET-QVFMIQKMKTGALMCFACE--SGAIMAHASQNEKERLRCFGENLG 218
           LDI   +D   D T + +++      A    A     GAI+   ++ E E LR +G + G
Sbjct: 171 LDIGWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEVEVEALRNYGLDTG 230

Query: 219 IIFQLADDLLD 229
           + FQ+ DDLL+
Sbjct: 231 LAFQIQDDLLN 241


>gi|317008891|gb|ADU79471.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           India7]
          Length = 307

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   I S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGEAIA-QILSNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              M  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFMEASLKSMAILL----NKDTKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|313885281|ref|ZP_07819032.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619387|gb|EFR30825.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 321

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 77/185 (41%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GK  R+ LV   A L   N  T     L + A IE  H  +LIHDD+  +D    RRG 
Sbjct: 45  SGKFARAGLVLMFARL---NQKTISQEKLNIAAGIELFHLATLIHDDV--IDEADQRRGI 99

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
              H+      AI AG+ LL YA   +          I  +     T  + L G L  Q+
Sbjct: 100 QAFHLAESNRIAIYAGDYLLAYAMRFLYQSGLNDFSGIEQK-----TIELILNGELN-QL 153

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            ++ D  +   +     K KT  L   A   G      S+ + ++    GE +G+ FQL 
Sbjct: 154 KNVADPTMTIYRYLRQIKGKTALLFGLATVGGYQTESISRRQLKQAYYAGEEIGMAFQLI 213

Query: 225 DDLLD 229
           DD LD
Sbjct: 214 DDQLD 218


>gi|284050730|ref|ZP_06380940.1| trans-hexaprenyltranstransferase [Arthrospira platensis str.
           Paraca]
          Length = 211

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 8/148 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D   +RRG PTVH  ++   A++AG+ L   +   +++
Sbjct: 72  RLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYLAN 129

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   + SQ+++ L      QG      L+  D  +           KT +L+  + 
Sbjct: 130 LDNLEVVKLLSQVIMDLAEGEIQQG------LNRFDTSLSIEAYLEKSYYKTASLIANSS 183

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIF 221
           ++  +++  S    E L  +G N+G+ F
Sbjct: 184 KAAGLLSGVSAELAEDLYKYGRNIGLAF 211


>gi|122890375|emb|CAL34101.1| putative trans-polyprenyl diphosphate synthetase [Streptomyces
           cinnamonensis]
          Length = 352

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 43/239 (17%)

Query: 24  LLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSF--LVTECASLFNVNHLTALRVGA 77
            L+    +  + N+R + A+         GGK+IR    +    A+  + +    +   A
Sbjct: 32  FLRAEHELWAEVNERAVGAVAALTDLVAAGGKRIRPAFCIAGYLAAGGDPDDTAVVAAAA 91

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGN 121
           A+E +H  +LIHDD+  +D    RRG+PTVH                 +Y E  AI+ G+
Sbjct: 92  ALEMLHASALIHDDV--IDASSHRRGRPTVHARHSALHDRNAWQGESRRYGEGVAILVGD 149

Query: 122 GLLTYAFEII-SSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEF-IDET 175
             L Y+ +++ ++P   L     +RS+LM+             GQ +D+    EF +D  
Sbjct: 150 LALVYSEQLMAAAPPAVLPVWGTLRSELMI-------------GQYMDMTAAAEFLVDPR 196

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
               I   K+G             A    +       +GE +G  FQL DDLLD   D 
Sbjct: 197 LSRWIALAKSGHYTIHRPLVVGASAAGRADLAPAFAKYGEAVGEAFQLRDDLLDAFGDF 255


>gi|15594659|ref|NP_212448.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31]
 gi|2688215|gb|AAC66696.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31]
          Length = 347

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 42  AIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A    L   N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I AGN  L Y        K+ LK+N   +L++       L  
Sbjct: 108 LKRRGASAIHLIYGIDNSINAGN--LIYFLPAKLIEKSNLKEN--QKLLIYENFFTTLSN 163

Query: 159 MLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  GQ +DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    F 
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223

Query: 215 ENLGIIFQLADDLLDCEEDL 234
           + LG+ FQ+ DD+ + +  +
Sbjct: 224 K-LGVYFQIIDDIKNIKNKI 242


>gi|320333936|ref|YP_004170647.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211]
 gi|319755225|gb|ADV66982.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211]
          Length = 329

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 38/207 (18%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           Y   GGK IR+ L+   A    V   T     AL + A +E    + LIHDD+   D+  
Sbjct: 32  YPARGGKGIRAELLLASARAHGVREGTPAWEQALWLAATVELFQNWVLIHDDI--EDDSE 89

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--MLSLTH----- 152
            RRG+P +H  +    A+ AG+ L  Y +  ++      + N+      +L + H     
Sbjct: 90  ERRGQPALHRTHGVPLALNAGDALHAYMWAAVA------RANVPGAFEEVLQMIHRTAEG 143

Query: 153 -NIGLQGMLGGQMLDIQDEFID----ETQVF-MIQKMKTGALMCFACESGAIMAHASQNE 206
            ++ L  +  G+      +++D    +T  + ++  ++ GAL   A  S A  A      
Sbjct: 144 QHVDLAWVEHGRWDLTPADYLDMVRLKTAYYTVVVPLRLGALAAGATPSAAFEA------ 197

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
                  G  LG  FQ+ DD+L+   D
Sbjct: 198 ------AGVALGAAFQIRDDVLNLTAD 218


>gi|117164792|emb|CAJ88341.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC
           23877]
          Length = 357

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 23/201 (11%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +L GGK++R  L+ E A L     +  L   A +IE +  + L+HDDL  +D+   RRG 
Sbjct: 51  SLRGGKRMRVVLLHEAARLVRDEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGG 108

Query: 105 PTVHIQYDEV----------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           PT +  Y E             ++AG+  L  +  ++     +L   +R Q M+ +    
Sbjct: 109 PTTYHAYRERFPRHPQAALGLTVLAGDLALALSLRVLLD--AELPVEVR-QAMVEVQTRA 165

Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNE--KE 208
                +G Q+ D++ +F     D+  +  +   K+      A     ++A   Q    +E
Sbjct: 166 ATDTFVG-QIADLERDFAPAVPDDDVLHDVADHKSARYSVLAPLYLGLLAAGEQPAAFEE 224

Query: 209 RLRCFGENLGIIFQLADDLLD 229
            LR +   +GI  Q+ DD LD
Sbjct: 225 ELRRYARLVGICGQMRDDYLD 245


>gi|319443462|pdb|3AQ0|A Chain A, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443463|pdb|3AQ0|B Chain B, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443464|pdb|3AQ0|C Chain C, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443465|pdb|3AQ0|D Chain D, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443466|pdb|3AQ0|E Chain E, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443467|pdb|3AQ0|F Chain F, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443468|pdb|3AQ0|G Chain G, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443469|pdb|3AQ0|H Chain H, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
          Length = 348

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++ K    
Sbjct: 97  EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT-- 152

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
             + + L  ++ H      ++ G+ ++I         + + +QK   KT +L+  +C++ 
Sbjct: 153 -EVVALLATAVEH------LVTGETMEITSSTAARYSMDYYMQKTYYKTASLISNSCKAV 205

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A++   +         +G NLG+ FQL DD+LD
Sbjct: 206 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 238


>gi|76800954|ref|YP_325962.1| multifunctional long-chain (E)-prenyl diphosphate synthase
           [Natronomonas pharaonis DSM 2160]
 gi|76556819|emb|CAI48393.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase
           [Natronomonas pharaonis DSM 2160]
          Length = 291

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 24/199 (12%)

Query: 46  ALLGGKKIR---SFLVTECASLFNVNH--------LTALRVGAAIECIHCYSLIHDDLPS 94
           +L GGK++R   + L  E A    V            A+     IE +H  SL+ DD+  
Sbjct: 35  SLSGGKRVRPMVALLAFEAAGGELVGEDGRGSEPSRNAIDFAVGIELVHNASLVVDDI-- 92

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D   +RRG  +    +    AI   +GLL  AF + S+    ++    ++ M+ L    
Sbjct: 93  IDESELRRGVDSAWAAFGYGPAITTSDGLLGEAFSLFSADPRAMR--TVAEAMVELGE-- 148

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                  G+  ++ +    E     + + KTGAL   A E GAI A A     +    + 
Sbjct: 149 -------GEATELVERPDSEAAYMELARRKTGALFRAAAELGAIAADADTYAVDAFGQYA 201

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +GI FQ+ DD+LD   D
Sbjct: 202 ERVGIAFQIRDDVLDATAD 220


>gi|302336334|ref|YP_003801541.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Olsenella uli DSM 7084]
 gi|301320174|gb|ADK68661.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Olsenella uli DSM 7084]
          Length = 355

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 11/192 (5%)

Query: 44  RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           R+   GGK+ R  LV         +   AL   A IE     +LIHDD+   D G +RRG
Sbjct: 59  RFVASGGKRTRPALVLLGCEAVGGDVERALSSAAGIEHFQSAALIHDDI--ADEGELRRG 116

Query: 104 KPTVHIQYDEVTAIIAGN-GLLTYAFEIISS----PKTQLKDNIRSQLMLSLTHNIGLQG 158
           +P  ++      AI  G+ G++    +++      P T+L+  + ++L       +  Q 
Sbjct: 117 EPCTYLTEGLGVAINTGDLGIVRTFADVLEDDALDPTTKLR--VLAELAQMEQRTVEGQA 174

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-GAIMAHASQNEKERLRCFGENL 217
           +  G + D + + +  +    + + KT      +  S GAI    S  +   L  FG + 
Sbjct: 175 LDLGWVRDGRWD-VSTSDYLRMARHKTAFYSASSPLSIGAICGGGSSGQVGALGSFGMDA 233

Query: 218 GIIFQLADDLLD 229
           G+ FQL DDLL+
Sbjct: 234 GLAFQLQDDLLN 245


>gi|302786728|ref|XP_002975135.1| geranyl diphosphate synthase [Selaginella moellendorffii]
 gi|300157294|gb|EFJ23920.1| geranyl diphosphate synthase [Selaginella moellendorffii]
          Length = 342

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL  A   +S+ +    
Sbjct: 75  EMIHVASLLHDDV--LDHADTRRGIASLNFIMGNKLAVLAGDFLLARAAFSLSTLQNDEV 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S+++  L     +Q  +  +     D ++ +T        KT +L+  +C+  AI+
Sbjct: 133 VGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYYLQKTF------YKTASLIANSCKCIAIL 186

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A   +        +G +LG+ +QL DDLLD
Sbjct: 187 AGHPKEVAALAFDYGRHLGLAYQLVDDLLD 216


>gi|229816079|ref|ZP_04446400.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM
           13280]
 gi|229808393|gb|EEP44174.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM
           13280]
          Length = 355

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 7/202 (3%)

Query: 33  TQHNDRLLSA--IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           T+  DR L A    +   GGK++R  L    A         AL  G AIE     +LIHD
Sbjct: 42  TEDLDRYLYAPLAHFTAGGGKRVRPVLALLGAEAVGGCADQALSCGVAIELFQSAALIHD 101

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLM 147
           D+   D   +RRG+P ++       AI AG+  LT  FEI+    S   + +  +  +L+
Sbjct: 102 DIA--DASELRRGEPCLYRTEGLGLAINAGDLALTRVFEIVLADGSLPAERRVRVLEELV 159

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
               H +  Q +  G   D + +   +  ++MI        +     +GA+ A A  +  
Sbjct: 160 RMERHTLEGQALDLGWARDGRWDVTSDDYLYMIDGKTAWYTVASPLYAGALAAGAEPDAV 219

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
             L   G   G+ FQL DDLL+
Sbjct: 220 RGLIEVGLPAGLAFQLQDDLLN 241


>gi|254384667|ref|ZP_05000006.1| polyprenyl synthetase [Streptomyces sp. Mg1]
 gi|194343551|gb|EDX24517.1| polyprenyl synthetase [Streptomyces sp. Mg1]
          Length = 357

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 11/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H ++L+HDD+  +D    RRG+ T    +    AII G+ +L  A  +++       
Sbjct: 105 ELAHNFTLLHDDV--IDKDVRRRGRATAWTVFGTPDAIITGDAMLALALRLLAQDGHPAS 162

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESG 196
               ++L   +        +  GQ  D    Q   +   +   +   KTGAL+  AC  G
Sbjct: 163 AAASARLATCIIE------LCAGQQADCAFEQRPDVSLDECLTMAMAKTGALLGCACALG 216

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A+ A A  +E + +  FG   G+ FQL DDL+
Sbjct: 217 ALYAGAGPDEVDAMDAFGREAGLAFQLIDDLI 248


>gi|302791545|ref|XP_002977539.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii]
 gi|300154909|gb|EFJ21543.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii]
          Length = 402

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL  A   +S+ +    
Sbjct: 151 EMIHVASLLHDDV--LDHADTRRGIASLNFIMGNKLAVLAGDFLLARAAFSLSTLQNDEV 208

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S+++  L     +Q  +  +     D ++ +T        KT +L+  +C+  AI+
Sbjct: 209 VGLMSKVLEHLVAGEVMQWTVDAEKSSSMDYYLQKTF------YKTASLIANSCKCIAIL 262

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A   +        +G +LG+ +QL DDLLD
Sbjct: 263 AGHPKEVAALAFDYGRHLGLAYQLVDDLLD 292


>gi|45190485|ref|NP_984739.1| AEL122Wp [Ashbya gossypii ATCC 10895]
 gi|44983427|gb|AAS52563.1| AEL122Wp [Ashbya gossypii ATCC 10895]
          Length = 351

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 33/218 (15%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTE-------CASLFNVNHLTALRV---GAAIECIHCYS 86
           D    ++ Y   GGK  R   V +       C S  ++      RV   G  +E +  Y 
Sbjct: 36  DWYEKSLNYNTPGGKLNRGLSVVDTYVILKNCKSPLDLPVDEYRRVALLGWCVELLQAYF 95

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MD    RRG+P  + + +EV     G+  +  AF + ++    LK N R Q 
Sbjct: 96  LVADDM--MDKSITRRGQPCWY-RVEEV-----GDMAINDAFMLEAAIYCLLKRNFRDQP 147

Query: 147 ----MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQK------MKTGALMCFACE 194
               +L L H++  Q  +G Q+LD+    EFI +   F +Q+       KT     +   
Sbjct: 148 YYVDLLELLHDVTFQTEVG-QLLDLMTAPEFIVDLNKFSLQRHSYIVIFKTAYYSFYLPV 206

Query: 195 SGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
           + A+ A    +E++  + R     LG  FQ+ DD LDC
Sbjct: 207 ALAMYAAGVNDERDFAQAREVLLPLGEYFQIQDDYLDC 244


>gi|302688755|ref|XP_003034057.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8]
 gi|300107752|gb|EFI99154.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8]
          Length = 320

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 18/223 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           R D IL  L   + S    ++   +L    Y L   GK+ R+ L+        V   T  
Sbjct: 3   RYDNILARL--SSESRWTPENEKAVLEPYEYLLSTPGKEFRTQLIDAFNKWLAVPGDTLQ 60

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE---I 130
            +   +  +H  SL+ DD+   D+  +RRGKP  H  Y     I  GN +   A+    +
Sbjct: 61  IIAKIVNMLHSASLMVDDIE--DDSQLRRGKPVTHKIYGVPQTINTGNYVYFLAYRELLL 118

Query: 131 ISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEFIDETQVFMIQKMKTGAL 188
           +  P   +  + + +  +LSL    GL+ +    +    +DE+ID     M+   KTG L
Sbjct: 119 LREPAKGIDVEKLVTDELLSLHRGQGLELLWRDSLQCPTEDEYID-----MVNN-KTGGL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +        +MA ++QN           +G+ FQ+ DDL++ +
Sbjct: 173 LRIGIR--LMMACSTQNRDMNYIPLVNLIGVFFQIRDDLMNLQ 213


>gi|134101716|ref|YP_001107377.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291003113|ref|ZP_06561086.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133914339|emb|CAM04452.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 368

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 47/256 (18%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++  L + L E  +R D ++ D   ++     TQ       ++R  L GGK+IR      
Sbjct: 21  VDAALGNFLDEQEERFDDLISDPQSRSQWRAATQ-------SLRGFLAGGKRIRPAFCYW 73

Query: 61  CASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---- 114
                         +GAA  +E +H ++L+HDD+  +D    RRG P++H Q+ E+    
Sbjct: 74  GWRGAGGGADDEGVIGAAAALELLHSFALVHDDI--IDASDTRRGAPSLHRQHAELHRRS 131

Query: 115 ------------TAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGM 159
                        A++ G+  L +  +++++   P  ++++  R  +  SLT       +
Sbjct: 132 GGRGSSELFGTSIALLLGDLCLAWFHDMLATSGLPAERIRE-ARPLVAHSLTE------L 184

Query: 160 LGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACES----GAIMAHASQNEKERLRC 212
           + GQ LD+ ++      V   + +   KT     +  E     G ++A AS         
Sbjct: 185 VLGQYLDVAEQACSRHSVSRSYTVIHYKTAK---YTIERPLHLGGVLAGASPALLGSYTA 241

Query: 213 FGENLGIIFQLADDLL 228
           +   LG  FQL DD+L
Sbjct: 242 YAMPLGEAFQLRDDVL 257


>gi|325676958|ref|ZP_08156630.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707]
 gi|325552258|gb|EGD21948.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707]
          Length = 389

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 39/213 (18%)

Query: 45  YALLGGKKIRSFLVT-----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R   V                  ALR  +A+E +   +L+HDD+  +D   
Sbjct: 74  FVLRGGKRVRPMFVWTGWLGAGGDATGPEAPAALRAASALELVQACALVHDDI--IDAST 131

Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS----SPKTQLK 139
            RRG PTVH+++ +                  AI+ G+  L +A ++I     SP  Q +
Sbjct: 132 TRRGFPTVHVEFADQHSAHHWSGGSAEFGRAVAILLGDLALAWADDMIREAGLSPDAQAR 191

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMC-FACES 195
                   +S   +     +LGGQ LDI  E   DET      + + KT A         
Sbjct: 192 --------ISPVWSAMRTEVLGGQFLDISSEVRGDETVEAALRVDRYKTAAYTIERPLHL 243

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           GA +A A        R FG ++GI FQL DDLL
Sbjct: 244 GAALAGADDALVAAYRTFGTDIGIAFQLRDDLL 276


>gi|225552210|ref|ZP_03773150.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1]
 gi|225371208|gb|EEH00638.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1]
          Length = 347

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 42  AIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR     L+     L   N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG+  +H+ Y    +I AGN  L Y        ++ LK+N   +L++       L  
Sbjct: 108 LKRRGESAIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSN 163

Query: 159 MLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  GQ +DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    F 
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223

Query: 215 ENLGIIFQLADDLLDCEEDL 234
           + LG+ FQ+ DD+ + +  +
Sbjct: 224 K-LGVYFQIIDDIKNIKNKI 242


>gi|145616288|ref|XP_360889.2| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15]
 gi|145010025|gb|EDJ94681.1| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15]
          Length = 711

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 34/204 (16%)

Query: 41  SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + IRY   +  K  RS LV   +   +V       + + I C+H  SLI DD+   DN  
Sbjct: 415 APIRYIQSMPSKGFRSALVDCYSRWLDVPAREMESIKSVINCLHDSSLILDDIE--DNSR 472

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG P  H+ Y    AI +   L   A   I+S      DN   ++M  L     LQ +
Sbjct: 473 LRRGFPATHVVYGAGPAINSATYLYVQAVAAINS-----LDN--REMMDVLLRQ--LQNL 523

Query: 160 LGGQMLDI----------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             GQ LD+          +DE++      M+ + KTGA +    E   ++A ++ N  E+
Sbjct: 524 FLGQSLDLHWTANRQCPTRDEYLG-----MVGQ-KTGAFISMVAE--LMIAASNVNSPEK 575

Query: 210 LR----CFGENLGIIFQLADDLLD 229
            R     F    G+ +Q+ DD L+
Sbjct: 576 TRAAFAAFSHLSGLYYQVRDDYLN 599


>gi|271969419|ref|YP_003343615.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
           43021]
 gi|270512594|gb|ACZ90872.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
           43021]
          Length = 326

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 31/161 (19%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA----FEIIS 132
           A +E IH  SL+HDDL  MD    RRG  T++ +  +  A++ G+ +L  A      ++S
Sbjct: 80  ACVELIHAGSLVHDDL--MDKAAERRGVRTLNAELGDARALVVGDFMLARAGLAALSVVS 137

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGAL 188
            P  +   ++  +L               GQ  ++ + F      E  +  I   KT AL
Sbjct: 138 KPVARTLASVVVELA-------------EGQFQEVAELFDPGRTPEDALRSITG-KTAAL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              +C    ++AH    +   +  +GE  G++FQ+ DDLLD
Sbjct: 184 FRASC----LVAHP---DGRSMAEYGERFGVLFQILDDLLD 217


>gi|257068597|ref|YP_003154852.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
 gi|256559415|gb|ACU85262.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
          Length = 377

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 48/193 (24%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAI 117
           R G AIE +   +L+HDD+  +D+  +RRG+P +H+Q                Y    AI
Sbjct: 90  RYGTAIELVQAAALMHDDV--IDHSPVRRGRPALHVQAERRHRAEELAGSAEDYGVAVAI 147

Query: 118 IAGNGLLTYAFEIIS----SPKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + G+  L++A +I S    SP          D +R+++M              GQ LDI 
Sbjct: 148 VLGDLALSWAEQIASGVEGSPGAVAAAHREFDALRTEVM-------------SGQFLDIL 194

Query: 169 DEF--------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            +          ++  + +I+       +      GA +  A     E L  +   +G  
Sbjct: 195 HQAGGFSSAPDAEQAALSVIRWKTVPYTVLRPVRIGAALLGADHTALETLSAWAIEVGTA 254

Query: 221 FQLADDLLDCEED 233
           FQL DDLL    D
Sbjct: 255 FQLRDDLLSVVGD 267


>gi|89074633|ref|ZP_01161098.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium
           sp. SKA34]
 gi|89049571|gb|EAR55131.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium
           sp. SKA34]
          Length = 298

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 40  LSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           LS +RY    GG + R+ +    A    +N  TA  +   +E +H  SLIHDD+   D  
Sbjct: 39  LSYLRYHQQSGGSQRRAKICYITAVSLGLNTNTAKLLAVTVELLHNASLIHDDVQDKDRQ 98

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG+  + ++     AI  G+ L+  A+  +S   T    ++++ +   +   I    
Sbjct: 99  --RRGQDALWVKASVEEAICLGDTLIIAAYHALSKINTPANSHLQATVCRRVMETI---- 152

Query: 159 MLGGQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
              GQM D+  +  + E    +I   K   L+  + E  A++A      K  L     + 
Sbjct: 153 --RGQMEDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPALLAGEPSLAKA-LSNAASSF 209

Query: 218 GIIFQLADDLLDCEED 233
            + +Q  DDL D  +D
Sbjct: 210 ALAYQFYDDLCDQAQD 225


>gi|126136094|ref|XP_001384571.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces
           stipitis CBS 6054]
 gi|126091769|gb|ABN66542.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces
           stipitis CBS 6054]
          Length = 350

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 34/225 (15%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAAIE 80
           +M  +  D  +  + Y   GGK  R   V +   + N      L          +G AIE
Sbjct: 29  NMPQEAVDWFVKNLDYNTPGGKLNRGLSVVDTYCILNKTTAVELDDEKYAKVALLGWAIE 88

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +  Y L+ DD+  MD    RRG+P  ++      A   GN  +  +F +  +    LK 
Sbjct: 89  LLQAYFLVADDM--MDQSKTRRGQPCWYL------AEGVGNIAINDSFMLEGAIYVLLKK 140

Query: 141 NIRSQL----MLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK------MKTGAL 188
           + R+      +L L H +  +  LG Q+LD+   DE++ +   F + K       KT A 
Sbjct: 141 HFRNDSYYVDLLDLFHEVTFKTELG-QLLDLVTADEYVVDLDKFSLDKHSFIVIFKT-AY 198

Query: 189 MCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
             F       M  +  N  E L+   +    LG  FQ+ DD LDC
Sbjct: 199 YSFYLPVALAMYMSGINSAEDLKQVQDILIPLGEYFQIQDDFLDC 243


>gi|94985718|ref|YP_605082.1| polyprenyl synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555999|gb|ABF45913.1| Polyprenyl synthetase [Deinococcus geothermalis DSM 11300]
          Length = 329

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 81/214 (37%), Gaps = 46/214 (21%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           Y   GGK IRS L+   A        T     AL + A +E    + LIHDD+   D+  
Sbjct: 32  YPERGGKGIRSELLLASARAHGALPSTSAWEGALWLAAGLELFQNWVLIHDDI--EDDSE 89

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRG+P +H  Y    AI  G+ L                       M +  H  G+ G 
Sbjct: 90  ERRGRPALHRLYGVPVAINVGDALHAS--------------------MWAAVHRAGVPGG 129

Query: 160 L-----------GGQMLDI-----QDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHA 202
           L            GQ LD+     +   + E     + ++KT    +      GA+ A  
Sbjct: 130 LEEFLNMVWRTAEGQHLDLTWVQERSWNLGEADYLAMVRLKTALYTVVVPLRLGALAAGV 189

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +  ER    GE LG  FQ+ DD+L+   D  K
Sbjct: 190 LPD--ERFTAAGEALGAAFQIRDDVLNLAGDPAK 221


>gi|82540178|ref|XP_724427.1| polyprenyl synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479061|gb|EAA15992.1| Polyprenyl synthetase, putative [Plasmodium yoelii yoelii]
          Length = 540

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 23/164 (14%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---FEI 130
           ++ AA E IH  SL+HDD+  +D    RRG  ++H +Y    +I++G+ LL  A   F  
Sbjct: 269 KIIAASEIIHMGSLLHDDV--IDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVFAS 326

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-KTGALM 189
           I  P+   +    S ++ SL     LQ  L    ++      D  + ++I+   KT +L 
Sbjct: 327 IGYPEICKR---FSYVIESLIKGEFLQTNLNYNNIE------DALKTYLIKSYHKTASLF 377

Query: 190 C--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLD 229
              FAC    I   + QN+K    CF  G ++G+ FQL DD LD
Sbjct: 378 SHLFAC----IAIISFQNDKITELCFNLGLHIGMAFQLYDDYLD 417


>gi|312140160|ref|YP_004007496.1| polyprenyl synthase [Rhodococcus equi 103S]
 gi|311889499|emb|CBH48816.1| putative polyprenyl synthase [Rhodococcus equi 103S]
          Length = 373

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 91/213 (42%), Gaps = 39/213 (18%)

Query: 45  YALLGGKKIRSFLVT-----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R   V                  ALR  +A+E +   +L+HDD+  +D   
Sbjct: 58  FVLRGGKRVRPMFVWTGWLGAGGDATGPEAPAALRAASALELVQACALVHDDI--IDAST 115

Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS----SPKTQLK 139
            RRG PTVH+++ +                  AI+ G+  L +A ++I     SP  Q +
Sbjct: 116 TRRGFPTVHVEFADQHSAHHWSGGSAEFGRAVAILLGDLALAWADDMIREAGLSPDAQAR 175

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DET--QVFMIQKMKTGALMC-FACES 195
                   +S   +     +LGGQ LDI  E   DET      + + KT A         
Sbjct: 176 --------ISPVWSAMRTEVLGGQFLDISSEVRGDETVEAALRVDRYKTAAYTIERPLHL 227

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           GA +A A        R FG ++GI FQL DDLL
Sbjct: 228 GAALAGADDALVAAYRTFGTDIGIAFQLRDDLL 260


>gi|294628908|ref|ZP_06707468.1| farnesyltranstransferase [Streptomyces sp. e14]
 gi|292832241|gb|EFF90590.1| farnesyltranstransferase [Streptomyces sp. e14]
          Length = 291

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 6/107 (5%)

Query: 6   PSKLQENSKR--IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT--EC 61
           P+     ++R  ID +L D L +   + +      L+  +   ++GGK+IR  L      
Sbjct: 26  PATPDTTAERQAIDDVLKDFLEKRRKNCEPSQMGGLIELLADFMVGGKRIRPILTMLGWQ 85

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           A        T ++V A++E  H ++LIHDD+  MD+   RRG+PT+H
Sbjct: 86  AVTGEAAGDTVVQVAASLEMFHAFALIHDDI--MDDSDTRRGRPTIH 130


>gi|71041847|pdb|1WL2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R90a Mutant
          Length = 299

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D     RGK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFARGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|71041848|pdb|1WL3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R91a Mutant
 gi|71041849|pdb|1WL3|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R91a Mutant
          Length = 299

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    R GK T++  Y +  A+ AG+ +L  AF  +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRAGKETINFMYGDKAAVAAGDLVLVSAFHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|119026031|ref|YP_909876.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium adolescentis ATCC 15703]
 gi|154488796|ref|ZP_02029645.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis
           L2-32]
 gi|118765615|dbj|BAF39794.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium adolescentis ATCC 15703]
 gi|154082933|gb|EDN81978.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis
           L2-32]
          Length = 362

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 32/207 (15%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +    F    +        L +  AIE     +L+HDD+  +D+  +RR
Sbjct: 51  GGKRLRALLTLDAFRAFAPQDVAERDMDAVLDLACAIEVFQTGALVHDDI--IDDSDLRR 108

Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTH 152
           GKP+ H      T          I+ G+ L T + +I +    +L          L++  
Sbjct: 109 GKPSAHRALATDTHSDAIGHGLGIMLGDMLATASVDIANKAACRLGSGSSVVSAFLNMHR 168

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFA-CESGAIMAHASQ 204
            + +     GQ+LD+  E   +D+ +        + + KT +    A  E G + A  + 
Sbjct: 169 EVEI-----GQVLDLAVELNTLDDPEELASASLNVFRWKTASYTTIAPLEFGMLAAGLAP 223

Query: 205 NEKERLR-CFGENLGIIFQLADDLLDC 230
            +  RL    G  LG+ FQLADDLLD 
Sbjct: 224 ADARRLALAIGLPLGLAFQLADDLLDV 250


>gi|168203177|gb|ACA21459.1| geranyl diphosphate synthase 3 [Picea abies]
          Length = 427

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 14/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   ++S
Sbjct: 170 RIAEITEMIHVASLLHDDV--LDDADTRRGVGSLNFVMGNKLAVLAGDFLLSRASVALAS 227

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQK--MKTGALMC 190
               LK+    +L+  +     L+ ++ G+++ + +       + + +QK   KT +LM 
Sbjct: 228 ----LKNTEVVELLSKV-----LEHLVTGEIMQMTNTNEQRCSMEYYMQKTFYKTASLMA 278

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +C++ A++A            +G NLG+ +QL DD+LD
Sbjct: 279 NSCKAIALIAGQPAEVCMLAYDYGRNLGLAYQLLDDVLD 317


>gi|284051507|ref|ZP_06381717.1| polyprenyl synthetase [Arthrospira platensis str. Paraca]
          Length = 537

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 80/204 (39%), Gaps = 20/204 (9%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  +    A         AL   AA+E  H   LIHDD+   D    RRGK
Sbjct: 218 YPFRGGKMLRPTMCISAARAMGGMGQVALSTAAALELYHNAFLIHDDI--EDGSESRRGK 275

Query: 105 PTVH--------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
            T+H        I   + T ++A  GLL      I   KT    N+  ++      ++  
Sbjct: 276 GTLHHNIGIPRAINVGDATNVLA-VGLLLENLSAIGVTKTL---NVLHEIEFMARQSVEG 331

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC---- 212
           Q M    + +      D     M  K          C  G I+ ++S N ++ +      
Sbjct: 332 QAMELDWVAENTQNLSDRDYFKMCVKKTCWYSFMTPCRIGLIVGNSSANPQDLVEPLAGV 391

Query: 213 --FGENLGIIFQLADDLLDCEEDL 234
             FG  LGI FQ+ DDLL+   D+
Sbjct: 392 TRFGMILGIAFQIQDDLLNLVGDM 415


>gi|30686146|ref|NP_850234.1| geranyl diphosphate synthase, putative / GPPS, putative /
           dimethylallyltransferase, putative / prenyl transferase,
           putative [Arabidopsis thaliana]
 gi|330253906|gb|AEC09000.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 321

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 34/215 (15%)

Query: 38  RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTAL------------RV---GAA- 78
           +L SA  Y     + GK+ RS ++   A+  NV    AL            RV   G A 
Sbjct: 8   KLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAE 67

Query: 79  -IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++ K  
Sbjct: 68  ITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT 125

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACE 194
               + + L  ++ H      ++ G+ ++I         + + +QK   KT +L+  +C+
Sbjct: 126 ---EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCK 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A++   +         +G NLG+ FQL DD+LD
Sbjct: 177 AVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 211


>gi|291569742|dbj|BAI92014.1| polyprenyl synthetase family protein [Arthrospira platensis
           NIES-39]
          Length = 537

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 80/204 (39%), Gaps = 20/204 (9%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  +    A         AL   AA+E  H   LIHDD+   D    RRGK
Sbjct: 218 YPFRGGKMLRPTMCISAARAMGGMGQVALSTAAALELYHNAFLIHDDI--EDGSESRRGK 275

Query: 105 PTVH--------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
            T+H        I   + T ++A  GLL      I   KT    N+  ++      ++  
Sbjct: 276 GTLHHNIGIPRAINVGDATNVLA-VGLLLENLSAIGVTKTL---NVLHEIEFMARQSVEG 331

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC---- 212
           Q M    + +      D     M  K          C  G I+ ++S N ++ +      
Sbjct: 332 QAMELDWVAENTQNLSDRDYFKMCVKKTCWYSFMTPCRIGLIVGNSSANPQDLVEPLAGV 391

Query: 213 --FGENLGIIFQLADDLLDCEEDL 234
             FG  LGI FQ+ DDLL+   D+
Sbjct: 392 TRFGMILGIAFQIQDDLLNLVGDM 415


>gi|46581581|ref|YP_012389.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46451004|gb|AAS97649.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235224|gb|ADP88078.1| Polyprenyl synthetase [Desulfovibrio vulgaris RCH1]
          Length = 321

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 18/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A            +  ++E +H  +L+HDD+  +D+  +RRG    H
Sbjct: 41  GGKRLRPLLTLLVARALGYADDDIYPLACSVELLHSATLLHDDI--LDDADLRRGMAAAH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQ 163
             +     ++AG+ LL  A  I++     +L   I   ++ + T  I     ++G   G+
Sbjct: 99  TVFGSTATVLAGDALLALANLIVARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGR 158

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                D +ID      I   KT  ++  +CE GA+ A AS+        FG +LGI FQ+
Sbjct: 159 -----DTYID------IITGKTAWMLRASCELGALRAGASEEAVRAAAAFGLDLGIAFQI 207

Query: 224 ADDLLD 229
            DD LD
Sbjct: 208 VDDALD 213


>gi|70606778|ref|YP_255648.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567426|gb|AAY80355.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 283

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 23/214 (10%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           ++DD++ +  S ++      +L   +Y L  GK+ R+ L              +L    A
Sbjct: 13  LIDDVIQKYLSQIKDLD---MLEVSKYILKDGKRYRAVLNMFFTEALGGELSNSLDAALA 69

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +H  SL  DD+   D    RRGK +    Y     +   N L+  A  IIS      
Sbjct: 70  IEILHSSSLALDDIVDYDT--TRRGKLSAWALYTNRRVVFITNYLIPSALNIISRYG--- 124

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
           ++ ++  L L     +G           I+D F   T      ++KT +L      S A+
Sbjct: 125 ENALKVSLELWKDTAVGA----------IKDMFGPATSYLSTIELKTSSLFKL---STAL 171

Query: 199 MAHASQNEKER--LRCFGENLGIIFQLADDLLDC 230
            A  +  EK+   L   G+ LGI++QL DD +DC
Sbjct: 172 AAFTADREKDLDLLLDMGKYLGIMYQLIDDYIDC 205


>gi|320583988|gb|EFW98200.1| Geranylgeranyl diphosphate synthase [Pichia angusta DL-1]
          Length = 316

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 22/217 (10%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG---GKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++L   S    + N++ L+   + L     GK +RS L+     + NV      ++ A I
Sbjct: 1   MVLVPLSPSWNKENEKTLTTPYHYLADQTQGKHLRSLLIKTFNLVLNVPAEKLEKIEAVI 60

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           + +H  SL+ DD+   DN  +RR +P  H+ +     I   N +   A  +++       
Sbjct: 61  DTLHLSSLLIDDIE--DNSKLRRSRPCSHMIFGVPQTINCANYMYFVAMRLLT------- 111

Query: 140 DNIRSQLMLSLTHNIGLQGMLG---GQMLDIQ----DEFIDETQVFMIQKMKTGALMCFA 192
           D I ++    +  N+ L  M+    GQ LD+     +E   E +   +   KTG L    
Sbjct: 112 DAIENEDKRLVAQNVFLDEMVNLHRGQGLDLHWRENNECPSEQEYVNMVMNKTGGLFRL- 170

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             S  +M   +    ++L      LG+I+Q+ DD L+
Sbjct: 171 --SAKLMNLLADQPCDKLITLSNMLGVIYQIKDDYLN 205


>gi|120601259|ref|YP_965659.1| trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4]
 gi|120561488|gb|ABM27232.1| Trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4]
          Length = 321

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 18/186 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A            +  ++E +H  +L+HDD+  +D+  +RRG    H
Sbjct: 41  GGKRLRPLLTLLVARALGYADDDIYPLACSVELLHSATLLHDDI--LDDADLRRGMAAAH 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQ 163
             +     ++AG+ LL  A  I++     +L   I   ++ + T  I     ++G   G+
Sbjct: 99  TVFGSTATVLAGDALLALANLIVARYGDPRLTACISEAIIRTATGEIVEIAHMRGTDHGR 158

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                D +ID      I   KT  ++  +CE GA+ A AS+        FG +LGI FQ+
Sbjct: 159 -----DTYID------IITGKTAWMLRASCELGALRAGASEEAVRAAAAFGLDLGIAFQI 207

Query: 224 ADDLLD 229
            DD LD
Sbjct: 208 VDDALD 213


>gi|79324330|ref|NP_001031483.1| geranyl diphosphate synthase, putative / GPPS, putative /
           dimethylallyltransferase, putative / prenyl transferase,
           putative [Arabidopsis thaliana]
 gi|57222236|gb|AAW39025.1| At2g34630 [Arabidopsis thaliana]
 gi|330253907|gb|AEC09001.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 422

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 34/215 (15%)

Query: 38  RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTAL-----------------RVGA 77
           +L SA  Y     + GK+ RS ++   A+  NV    AL                  +  
Sbjct: 109 KLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAE 168

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++ K  
Sbjct: 169 ITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT 226

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACE 194
               + + L  ++ H      ++ G+ ++I         + + +QK   KT +L+  +C+
Sbjct: 227 ---EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCK 277

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A++   +         +G NLG+ FQL DD+LD
Sbjct: 278 AVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 312


>gi|109947883|ref|YP_665111.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str.
           Sheeba]
 gi|109715104|emb|CAK00112.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str.
           Sheeba]
          Length = 307

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S  +  L   I S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMEN-LIAQILSNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              M  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  ++
Sbjct: 164 AHFMEASLKSMAILL----NKDAKIYANFGLNFGMAFQIIDDLLDITQN 208


>gi|11467329|ref|NP_043186.1| prenyl transferase [Cyanophora paradoxa]
 gi|399307|sp|P31171|PREA_CYAPA RecName: Full=Prenyl transferase
 gi|336639|gb|AAA65472.1| prephytoene pyrophosphate dehydrogenase [Cyanophora paradoxa]
 gi|1016130|gb|AAA81217.1| prenyl transferase [Cyanophora paradoxa]
          Length = 323

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 14/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D   +RRG PTVH  +    AI+AG+ L   +   ++ 
Sbjct: 72  RLAEITEIIHTASLVHDDI--LDESDVRRGIPTVHSDFGTKIAILAGDFLFAQSSWYLA- 128

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQK--MKTGALMC 190
                  N+ S  ++ L   + +     G++    ++F +D T    ++K   KT +L+ 
Sbjct: 129 -------NLESLEVVKLISKV-ITDFAEGEIRRGLNQFKVDLTLEEYLEKSFYKTASLLA 180

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + ++ A+++H        L  +G +LG+ FQ+ DD+LD
Sbjct: 181 ASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILD 219


>gi|289774146|ref|ZP_06533524.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
 gi|289704345|gb|EFD71774.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
          Length = 392

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 57/262 (21%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS---AIRYALL---GGKKIRSFLVT 59
           P    + +  +D +L  +L +   H +    D L +   A R A L   GGK++R+    
Sbjct: 29  PVTATDAANAVDAVLRGVLDERLRHCRAV--DPLFARELADRLAALTARGGKRLRTAFA- 85

Query: 60  EC---ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------- 109
            C   A+  + +    LR GAA+E +   +L+HDD+  MD    RRG P +H+       
Sbjct: 86  HCGWRAAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHW 143

Query: 110 ---------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-- 158
                     +    A++ G+  L +A            D++ ++  L   H   L G  
Sbjct: 144 AAGMHGSSESFGTSAAVLTGDLALAWA------------DDLLTETALGTPHGPRLHGEW 191

Query: 159 ------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEK-- 207
                 M+ GQ  D+  +    + V     I  +K+ AL   A         A   +   
Sbjct: 192 RAMRTEMVAGQYRDLHAQAARSSGVDEALAIATLKS-ALYTVARPLALGAVLAGAADGDA 250

Query: 208 -ERLRCFGENLGIIFQLADDLL 228
            E LR  G   G+ FQL DDLL
Sbjct: 251 LEALRAAGRCAGLAFQLRDDLL 272


>gi|29841005|gb|AAP06018.1| similar to NM_010282 geranylgeranyl diphosphate synthase 1; GGPP
           synthase in Mus musculus [Schistosoma japonicum]
          Length = 335

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 19/181 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS L+        V   T   + + I+ +H  SLI DD+   D  Y+RRGKP  H 
Sbjct: 29  GKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDDIE--DGSYLRRGKPAAHC 86

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +   ++I + N +   A E +S  +      I ++ ML L           GQ +DI  
Sbjct: 87  VFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELHR---------GQGMDIYW 137

Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  F    E++   +   KTG L         +M   S+N+ +  +   + +G+ FQ+ D
Sbjct: 138 RSSFKCPSESEYEAMVLCKTGGLFGLGVR---LMQLFSKNQTD-YKPLLDTIGLFFQIRD 193

Query: 226 D 226
           D
Sbjct: 194 D 194


>gi|20260214|gb|AAM13005.1| putative trans-prenyltransferase [Arabidopsis thaliana]
          Length = 423

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 34/215 (15%)

Query: 38  RLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTAL-----------------RVGA 77
           +L SA  Y     + GK+ RS ++   A+  NV    AL                  +  
Sbjct: 110 KLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAE 169

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++ K  
Sbjct: 170 ITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT 227

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACE 194
               + + L  ++ H      ++ G+ ++I         + + +QK   KT +L+  +C+
Sbjct: 228 ---EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCK 278

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + A++   +         +G NLG+ FQL DD+LD
Sbjct: 279 AVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 313


>gi|219685642|ref|ZP_03540457.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04]
 gi|219672830|gb|EED29854.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04]
          Length = 347

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 14/202 (6%)

Query: 40  LSAIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L AI     GGK+IR  ++   A    L   N     ++   +E  H  SLI DD+   D
Sbjct: 48  LPAIEIINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--D 105

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG   +H+ Y    +I AGN  L Y        ++ LK+N   +L++       L
Sbjct: 106 NSLKRRGGSAIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTL 161

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             +  GQ +DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    
Sbjct: 162 SNLHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYST 221

Query: 213 FGENLGIIFQLADDLLDCEEDL 234
           F + LG+ FQ+ DD+ + +  +
Sbjct: 222 FLK-LGVYFQIIDDIKNIKNKI 242


>gi|319443460|pdb|3APZ|A Chain A, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl
           Pyrophosphate Synthase
 gi|319443461|pdb|3APZ|B Chain B, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl
           Pyrophosphate Synthase
          Length = 348

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++ K    
Sbjct: 97  EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT-- 152

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
             + + L  ++ H      ++ G+ ++I         + + +QK   KT +L+  +C++ 
Sbjct: 153 -EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 205

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A++   +         +G NLG+ FQL DD+LD
Sbjct: 206 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 238


>gi|164605004|dbj|BAF98298.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 330

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   ++S K    
Sbjct: 164 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLK---N 218

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S L   + H +  + M   QM    ++             KT +L+  +C++ A++
Sbjct: 219 TEVVSLLATVVEHLVTGETM---QMTSTSEQRCSMDHYMQKTYYKTASLISDSCKAIALL 275

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  +         +G++LG+ FQL DD+LD
Sbjct: 276 AGQTTEVAMLAFEYGKSLGLAFQLIDDVLD 305


>gi|94984603|ref|YP_603967.1| dimethylallyltransferase [Deinococcus geothermalis DSM 11300]
 gi|94554884|gb|ABF44798.1| Dimethylallyltransferase [Deinococcus geothermalis DSM 11300]
          Length = 575

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 44/202 (21%)

Query: 49  GGKKIR---SFLVTECASL--FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK+ R   +FL  +   L   +    T   +   IE +H  SL+HDDL  +D+   RRG
Sbjct: 291 GGKRARPTVTFLAAQALGLDGQDPRWQTVTDLAVCIELLHSASLLHDDL--IDDADTRRG 348

Query: 104 KPTVHIQYDEVTAIIAGNGL----------------LTYAFEIISSPKTQLKDNIRSQLM 147
           +     ++  V ++++G+ +                LT AF   +S   Q+ +    Q  
Sbjct: 349 QQAAFRRFGNVVSVMSGDFMLARLLTLLAAMPQGPALTRAFGQTAS---QICEGEVLQFQ 405

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           ++     GL              ++D      I   KT AL+  A  S A++ +A + ++
Sbjct: 406 VAAYAEYGLA------------PYLD------IIHGKTAALIELAAFSPALLLNAPEAQR 447

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
             L  FG   G+ FQ+ DDLLD
Sbjct: 448 AALATFGREYGLAFQIQDDLLD 469


>gi|289706465|ref|ZP_06502819.1| polyprenyl synthetase [Micrococcus luteus SK58]
 gi|289556784|gb|EFD50121.1| polyprenyl synthetase [Micrococcus luteus SK58]
          Length = 358

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 29/217 (13%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL------RVGAAIECIHCYSLIHDDL 92
           LL ++   +  GK IR  LV     L   + +         R+GAA E +H   L+HDD+
Sbjct: 39  LLDSLHVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDDV 98

Query: 93  PSMDNGYIRRGKPTVHIQYDE-----------------VTAIIAGNGLLTYAFEIISSPK 135
             +D   +RRG+P VH                        A+IAG+ LLT AF + ++  
Sbjct: 99  --IDRDTLRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATCA 156

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFA 192
             +     +  ++     +   G L   +L +     E  D  ++  +Q++KT      A
Sbjct: 157 ADIARAAEAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVGA 216

Query: 193 -CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              +GA++A A       +   G +LG  +Q+ DD+L
Sbjct: 217 PLRAGALLAGADPGLARAMGEAGADLGAAYQVIDDVL 253


>gi|254503516|ref|ZP_05115667.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
 gi|222439587|gb|EEE46266.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
          Length = 318

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F       + + A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 37  GGKRLRPMLTLAFADMFGYQGSGHVILAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 94

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     I S+    +     LQ  LG      +
Sbjct: 95  KLWGNQASVLVGDYLLGQAFKMMVDTGSLEALRILSEASAIIAEGEVLQ--LGAS----K 148

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT AL   A E G  +A  +   ++  R +G  LG  FQ+ DD L
Sbjct: 149 NIETTEAEYLRVIEAKTAALFAAAAEVGPEIAGQNDVMRKAARTYGLELGYAFQMVDDAL 208

Query: 229 D 229
           D
Sbjct: 209 D 209


>gi|297196800|ref|ZP_06914197.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
 gi|197711617|gb|EDY55651.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
          Length = 713

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 31/220 (14%)

Query: 32  QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q + ++ L+  +R  L   G+  R +       LF  +      + A  E +H  SLI D
Sbjct: 380 QDRLHESLVQPVRMLLDAPGRAWRPYTALSVLCLFGADPEPYRPLAALTELLHTASLIID 439

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII------SSPKTQLKDNIRS 144
           D+   D   +RRG+ TVH       AI AG     +AFE +        P T L+     
Sbjct: 440 DI--QDGSPLRRGRATVHEVIGTPAAITAGTAAF-FAFEPLLQRIPQHDPATMLR---VY 493

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ------DEFI---DETQVF----MIQKMKTGALMCF 191
           QL L       L+    GQ LD+       D  +   D  Q+        ++K+G  +  
Sbjct: 494 QLCLR-----ALRAGHAGQALDLSSHQAAFDHAVTTGDNRQLLADIRTTHRLKSGVPVRC 548

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             E  A++A A + +   +  + E +GI++Q++DD+ D +
Sbjct: 549 IAEVAAVLADADEAQIRAVGDYFETVGIVYQISDDVADLD 588


>gi|224532172|ref|ZP_03672804.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116]
 gi|224511637|gb|EEF82043.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116]
          Length = 347

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 14/193 (7%)

Query: 49  GGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR     L+     L   N     ++   +E  H  SLI DD+   DN   RRG  
Sbjct: 57  GGKRIRPMIMILLAYALGLKEKNDKLIYKLSLLLELPHSGSLIIDDIE--DNSLKRRGTS 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +H+ Y    +I AGN  L Y        ++ LK+N   +L++       L  +  GQ +
Sbjct: 115 AIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSNLHLGQGI 170

Query: 166 DIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    F + LG+ F
Sbjct: 171 DIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFLK-LGVYF 229

Query: 222 QLADDLLDCEEDL 234
           Q+ DD+ + +  +
Sbjct: 230 QIIDDIKNIKNKI 242


>gi|21218742|ref|NP_624521.1| geranylgeranyl pyrophosphate synthase [Streptomyces coelicolor
           A3(2)]
 gi|5748647|emb|CAB53152.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           coelicolor A3(2)]
          Length = 392

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 57/262 (21%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS---AIRYALL---GGKKIRSFLVT 59
           P    + +  +D +L  +L +   H +    D L +   A R A L   GGK++R+    
Sbjct: 29  PVTATDAANAVDAVLRGVLDERLRHCRAV--DPLFARELADRLAALTARGGKRLRTAFA- 85

Query: 60  EC---ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------- 109
            C   A+  + +    LR GAA+E +   +L+HDD+  MD    RRG P +H+       
Sbjct: 86  HCGWRAAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHW 143

Query: 110 ---------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-- 158
                     +    A++ G+  L +A            D++ ++  L   H   L G  
Sbjct: 144 AAGMHGSSESFGTSAAVLTGDLALAWA------------DDLLTETALGTPHGPRLHGEW 191

Query: 159 ------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEK-- 207
                 M+ GQ  D+  +    + V     I  +K+ AL   A         A   +   
Sbjct: 192 RAMRTEMVAGQYRDLHAQAARSSGVDEALAIATLKS-ALYTVARPLALGAVLAGAADGDA 250

Query: 208 -ERLRCFGENLGIIFQLADDLL 228
            E LR  G   G+ FQL DDLL
Sbjct: 251 LEALRAAGRCAGLAFQLRDDLL 272


>gi|256790271|ref|ZP_05528702.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
          Length = 375

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 57/262 (21%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS---AIRYALL---GGKKIRSFLVT 59
           P    + +  +D +L  +L +   H +    D L +   A R A L   GGK++R+    
Sbjct: 12  PVTATDAANAVDAVLRGVLDERLRHCRAV--DPLFARELADRLAALTARGGKRLRTAFA- 68

Query: 60  EC---ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------- 109
            C   A+  + +    LR GAA+E +   +L+HDD+  MD    RRG P +H+       
Sbjct: 69  HCGWRAAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHW 126

Query: 110 ---------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-- 158
                     +    A++ G+  L +A            D++ ++  L   H   L G  
Sbjct: 127 AAGMHGSSESFGTSAAVLTGDLALAWA------------DDLLTETALGTPHGPRLHGEW 174

Query: 159 ------MLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEK-- 207
                 M+ GQ  D+  +    + V     I  +K+ AL   A         A   +   
Sbjct: 175 RAMRTEMVAGQYRDLHAQAARSSGVDEALAIATLKS-ALYTVARPLALGAVLAGAADGDA 233

Query: 208 -ERLRCFGENLGIIFQLADDLL 228
            E LR  G   G+ FQL DDLL
Sbjct: 234 LEALRAAGRCAGLAFQLRDDLL 255


>gi|258652703|ref|YP_003201859.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
 gi|258555928|gb|ACV78870.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
          Length = 385

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 32/179 (17%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAII 118
           V AA+E +H ++L+HDD+  MD    RRG PTVH Q                +    AI+
Sbjct: 113 VSAALELLHLFALVHDDV--MDESDSRRGVPTVHRQAGRRHAATGAVGDPELFGTSIAIL 170

Query: 119 AGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-EFIDET 175
           AG+  L  A  +I  + P T+    +   L++ L   +G +  L G     +D  F    
Sbjct: 171 AGDLALAEAEGMIAETPPATR---RLWRHLVVELV--VGQRQDLTGTAARRRDLPFAHSV 225

Query: 176 QVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +     +K+G        E GA++A A  + +  L  +G++LG  F L DD+L    D
Sbjct: 226 AI-----LKSGRYTVQRPLELGAVIAGAPDSTRLALSNYGQHLGEAFALRDDVLGVWGD 279


>gi|241951352|ref|XP_002418398.1| dimethylallyltranstransferase, putative; farnesyl diphosphate
           synthetase, putative; farnesyl pyrophosphate synthetase,
           putative; geranyltranstransferase, putative [Candida
           dubliniensis CD36]
 gi|223641737|emb|CAX43698.1| dimethylallyltranstransferase, putative [Candida dubliniensis CD36]
          Length = 351

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 24/222 (10%)

Query: 28  ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN------VNHLTALRV---GAA 78
           + +M  +  D  + ++ Y   GGK  R   V +  ++ N      +N     +V   G A
Sbjct: 28  SYNMPQEAIDWFIKSLNYNTPGGKLNRGLSVVDTYAILNNTTSDKLNDTEYKKVAILGWA 87

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +  Y L+ DD+  MD    RRG+P  ++        I  + +L  A  I+   K   
Sbjct: 88  IELLQAYFLVADDM--MDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL--KNHF 143

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK------MKTGALMC 190
           + +     +L L H +  Q  LG Q+LD+   DE I +   F + K       KT     
Sbjct: 144 RQDPYYVDLLDLFHEVTFQTELG-QLLDLITADEEIVDLNKFSLDKHSFIVIFKTAYYSF 202

Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
           +     A+      NEK+  +++     LG  FQ+ DD LDC
Sbjct: 203 YLPVVLAMYMSGINNEKDLKQVKDILIPLGEYFQIQDDFLDC 244


>gi|195941332|ref|ZP_03086714.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi 80a]
 gi|216264524|ref|ZP_03436516.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a]
 gi|218249896|ref|YP_002374836.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7]
 gi|221217647|ref|ZP_03589115.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a]
 gi|224533848|ref|ZP_03674436.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a]
 gi|225548998|ref|ZP_03769973.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a]
 gi|225550179|ref|ZP_03771139.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a]
 gi|226321631|ref|ZP_03797157.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26]
 gi|215980997|gb|EEC21804.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a]
 gi|218165084|gb|ACK75145.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7]
 gi|221192324|gb|EEE18543.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a]
 gi|224513141|gb|EEF83504.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a]
 gi|225369291|gb|EEG98744.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a]
 gi|225370224|gb|EEG99662.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a]
 gi|226232820|gb|EEH31573.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26]
 gi|312148376|gb|ADQ31035.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi JD1]
 gi|312149235|gb|ADQ29306.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi N40]
          Length = 347

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 14/200 (7%)

Query: 42  AIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR     L+     L   N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I AGN  L Y        ++ LK+N   +L++       L  
Sbjct: 108 LKRRGASAIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSN 163

Query: 159 MLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  GQ +DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    F 
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223

Query: 215 ENLGIIFQLADDLLDCEEDL 234
           + LG+ FQ+ DD+ + +  +
Sbjct: 224 K-LGVYFQIIDDIKNIKNKI 242


>gi|302833229|ref|XP_002948178.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f.
           nagariensis]
 gi|300266398|gb|EFJ50585.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f.
           nagariensis]
          Length = 403

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 20/168 (11%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG  +++      TAI+AG+ LL  A   +++
Sbjct: 134 RIAEIAELIHVASLLHDDV--IDDAETRRGVVSLNNVMGNKTAILAGDFLLARASVSLAA 191

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +      + SQ+   L H +  + M   QM    ++ +D          KT +LM  + 
Sbjct: 192 LRNSETVVLMSQV---LEHLVSGEIM---QMTATSEQLLDLDHYLAKTYCKTASLMANSS 245

Query: 194 ESGAIMAHASQNEKERLRC------------FGENLGIIFQLADDLLD 229
            S A++A           C            +G +LG+ FQ+ DDLLD
Sbjct: 246 RSIAVLAGVPPEHVCGAVCGSGDVVCDMAWSYGRHLGLAFQVVDDLLD 293


>gi|183980313|ref|YP_001848604.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M]
 gi|183173639|gb|ACC38749.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M]
          Length = 329

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 10/153 (6%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH ++L+HDD+  MD    RRG+ TV   +    AI+ G+ L   A   ++     L
Sbjct: 77  VELIHNFTLLHDDV--MDGDSTRRGRATVWRVWGVNNAILLGDALHALAIRTLTD---SL 131

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACES 195
              +    +  L        +  GQ  D   E      V    +M   KT  LM  AC  
Sbjct: 132 GQGVAVNAITRLEQTC--LDLCVGQHQDCSFERCTTVTVPDYLRMAAGKTAVLMACACAL 189

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           GA+ A A       +  FG  LG+ FQ+ DDL+
Sbjct: 190 GAVSARADAATVAAVERFGYELGLAFQIVDDLI 222


>gi|118464723|ref|YP_881525.1| polyprenyl synthetase [Mycobacterium avium 104]
 gi|254774993|ref|ZP_05216509.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118166010|gb|ABK66907.1| polyprenyl synthetase [Mycobacterium avium 104]
          Length = 349

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 44/175 (25%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTY 126
           H  +L+HDD+  +D+   RRG+PT H+++  +                 AI+ G+  L +
Sbjct: 77  HACALVHDDV--IDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAW 134

Query: 127 AFEIIS----SPKT-----QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           A +I+     +P+      ++  NIR++             +LGGQ LDI  E      +
Sbjct: 135 ADDIVLGVDLTPQAARRVRRVWANIRTE-------------VLGGQYLDIVAEASAAASI 181

Query: 178 FMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                + T    C+        GA  A    +  +    FG +LG+ FQL DD+L
Sbjct: 182 ASAMNVDTFKTACYTVSRPLQLGAAAAADRPDVHDLFSQFGTDLGVAFQLRDDVL 236


>gi|223888948|ref|ZP_03623539.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b]
 gi|224533104|ref|ZP_03673704.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23]
 gi|226320615|ref|ZP_03796175.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805]
 gi|223885764|gb|EEF56863.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b]
 gi|224511831|gb|EEF82232.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23]
 gi|226234034|gb|EEH32755.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805]
          Length = 347

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 42  AIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A    L   N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I AGN  L Y        ++ LK+N   +L++       L  
Sbjct: 108 LKRRGASAIHLIYGIDNSINAGN--LIYFLPAKLIERSNLKEN--QKLLIYENFFTTLSN 163

Query: 159 MLGGQMLDIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  GQ +DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    F 
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFL 223

Query: 215 ENLGIIFQLADDLLDCEEDL 234
           + LG+ FQ+ DD+ + +  +
Sbjct: 224 K-LGVYFQIIDDIKNIKNKI 242


>gi|297823251|ref|XP_002879508.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325347|gb|EFH55767.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 422

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++ K    
Sbjct: 171 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT-- 226

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
             + + L  ++ H      ++ G+ ++I         + + +QK   KT +L+  +C++ 
Sbjct: 227 -EVVALLATAVEH------LVTGETMEITSTTEQRYSMDYYMQKTYYKTASLISNSCKAV 279

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A++   +         +G+NLG+ FQL DD+LD
Sbjct: 280 AVLTGQTAEVAVLAFEYGKNLGLAFQLIDDILD 312


>gi|329904645|ref|ZP_08273892.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547880|gb|EGF32635.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 281

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 7/139 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GG+++R+ L    A   +++   A+ +   +E +H  SLIHDDL   D    RRG  T+ 
Sbjct: 39  GGQRVRARLALYAAQALHLSDDDAVTIAVTVELLHNASLIHDDL--QDRDVQRRGCATLW 96

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + E  AI AG+ LL+ A+  +     +  D+ R   +L+  H       + GQ  D+ 
Sbjct: 97  SAFGENVAICAGDLLLSAAYGNL----CRFSDSTRLPQLLAQVHG-ATASAVHGQCADLS 151

Query: 169 DEFIDETQVFMIQKMKTGA 187
            +  D      I   K+GA
Sbjct: 152 GQACDIALYEKIAAAKSGA 170


>gi|224534236|ref|ZP_03674814.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S]
 gi|224514338|gb|EEF84654.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S]
          Length = 347

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%)

Query: 49  GGKKIRSFLVTECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  ++   A    L   N     ++   +E  H  SLI DD+   DN   RRG  
Sbjct: 57  GGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNSLKRRGAS 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +H+ Y    +I  GN +     ++I   ++ LK+N   +LM+       L  +  GQ +
Sbjct: 115 AIHLIYGIDNSINTGNLIYFLPAKLIE--RSNLKEN--QKLMIYENFFTTLSNLHLGQGI 170

Query: 166 DIQ---DEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           DI+   + +I   + ++ + ++KT +L   A    AI+ +     K+    F + LG+ F
Sbjct: 171 DIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTFLK-LGVYF 229

Query: 222 QLADDLLDCEEDL 234
           Q+ DD+ + +  +
Sbjct: 230 QIIDDIKNIKNKI 242


>gi|15644868|ref|NP_207038.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695]
 gi|2313331|gb|AAD07307.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695]
          Length = 307

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKAAMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +  ++ S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAKSL-SNAVLRLSRG------------EIEDVFVGGSFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208


>gi|226493052|ref|NP_001145807.1| hypothetical protein LOC100279314 [Zea mays]
 gi|219884511|gb|ACL52630.1| unknown [Zea mays]
          Length = 428

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++    L 
Sbjct: 177 EMIHVASLLHDDV--LDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA----LG 230

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
           +     LM +      ++ ++ G+ + I         + + +QK   KT +L+  +C++ 
Sbjct: 231 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAV 285

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AI+A  +         +G NLG+ FQL DD+LD
Sbjct: 286 AILAGHTTEVSVLAHEYGRNLGLAFQLIDDVLD 318


>gi|331696598|ref|YP_004332837.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190]
 gi|326951287|gb|AEA24984.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190]
          Length = 403

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 35/211 (16%)

Query: 44  RYALLGGKKIR---SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           R+ + GGK+IR   ++     A         ALR  +A+E +   +L+HDDL  +D+   
Sbjct: 87  RFVVGGGKRIRPTFAWWGWRGAGGDPAAAGAALRAVSALELLQACALVHDDL--IDDSAT 144

Query: 101 RRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           RRG+PTVH+++                    AI+ G+  L +A + + S         R+
Sbjct: 145 RRGRPTVHVEFAGRHRDGGWSGPADRFGAAAAILLGDIALAWADDTLQSSGLDAAALARA 204

Query: 145 QLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACES----GA 197
                         +L GQ LD+               + + KT A   +  E     GA
Sbjct: 205 GAPWRAMRTE----VLCGQYLDVLAQATADTSTAAAMRVNRFKTAA---YTVERPLHIGA 257

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +A A        R FG ++GI FQL DD+L
Sbjct: 258 ALAGADDRLVAAYRGFGTDIGIAFQLRDDML 288


>gi|11322965|emb|CAC16849.1| geranyl diphosphate synthase [Arabidopsis thaliana]
          Length = 422

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++ K    
Sbjct: 171 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT-- 226

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
             + + L  ++ H      ++ G+ ++I         + + +QK   KT +L+  +C++ 
Sbjct: 227 -EVVALLATAVEH------LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 279

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A++   +         +G NLG+ FQL DD+LD
Sbjct: 280 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 312


>gi|317180046|dbj|BAJ57832.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F32]
          Length = 307

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAKAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|217031457|ref|ZP_03436962.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128]
 gi|298736814|ref|YP_003729344.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8]
 gi|216946657|gb|EEC25253.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128]
 gi|298356008|emb|CBI66880.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8]
          Length = 307

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   I S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGEAIA-QILSNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKNAKMYADFGLNFGMAFQIIDDLLDITQD 208


>gi|294811348|ref|ZP_06769991.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC
           27064]
 gi|326439920|ref|ZP_08214654.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294323947|gb|EFG05590.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC
           27064]
          Length = 362

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +L GGK++R  L+ E A L     +  L   A ++E +H + L+HDD+  +D+  +RRG 
Sbjct: 57  SLRGGKRLRVALLHEAARLVTDAEVPGLDEAALSVELLHTHGLVHDDI--VDDAPLRRGA 114

Query: 105 PTVHIQY------DEVT----AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           P+V+  Y       E T    A++AG+     + +++   +  L D +R  L L+     
Sbjct: 115 PSVYYAYRAEFPGQERTAVGLAVLAGDLAAFLSVQVLL--EAPLPDGLR--LALAQEQTR 170

Query: 155 GLQGMLGGQMLDIQ--------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
                + GQ LD++        D+F+       + + K+      A     ++A     E
Sbjct: 171 ASAETVLGQFLDLERDVPPLPGDDFL-----HTVTEFKSARYSILAPLRLGLLAAGEDPE 225

Query: 207 KE--RLRCFGENLGIIFQLADDLLD 229
                LR +   +GI  Q+ DD LD
Sbjct: 226 PYAGELRRYAVLVGIYEQMRDDYLD 250


>gi|185813044|gb|ACC77966.1| geranyl pyrophosphate synthase [Catharanthus roseus]
          Length = 420

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           + IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   ++S K    
Sbjct: 169 KMIHVASLLHDDV--LDDAETRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLK---N 223

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + S L   + H +  + M   QM    D+              T +L+  +C++ A++
Sbjct: 224 TEVVSLLATVVEHLVTGETM---QMTTTSDQRCSMEYYMQKTYYMTASLISNSCKAIALL 280

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  +         +G+NLG+ FQL DD+LD
Sbjct: 281 AGQTSEVAMLAYEYGKNLGLAFQLIDDVLD 310


>gi|283456281|ref|YP_003360845.1| polyprenyl synthase [Bifidobacterium dentium Bd1]
 gi|283102915|gb|ADB10021.1| idsA Polyprenyl synthase [Bifidobacterium dentium Bd1]
          Length = 359

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 34/208 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +F  +          L +  A+E     +L+HDD+  +D+  +RR
Sbjct: 51  GGKRLRALLTLDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRR 108

Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLT 151
           G+P+ H      T          I+ G+ L T + +I +    +L   D++     L++ 
Sbjct: 109 GRPSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAF-LTMH 167

Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFA-CESGAIMAHAS 203
             + +     GQ+LD+  E   +D+ +  +     + + KT +    A  E G + A   
Sbjct: 168 REVEI-----GQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLD 222

Query: 204 QNEKERLR-CFGENLGIIFQLADDLLDC 230
            +    L    G  LG+ FQLADDLLD 
Sbjct: 223 ASAARDLAMSIGLPLGLAFQLADDLLDV 250


>gi|171742640|ref|ZP_02918447.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC
           27678]
 gi|171278254|gb|EDT45915.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC
           27678]
          Length = 391

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 34/208 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +F  +          L +  A+E     +L+HDD+  +D+  +RR
Sbjct: 83  GGKRLRALLTLDSFRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRR 140

Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLT 151
           G+P+ H      T          I+ G+ L T + +I +    +L   D++     L++ 
Sbjct: 141 GRPSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAF-LTMH 199

Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFA-CESGAIMAHAS 203
             + +     GQ+LD+  E   +D+ +  +     + + KT +    A  E G + A   
Sbjct: 200 REVEI-----GQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLD 254

Query: 204 QNEKERLR-CFGENLGIIFQLADDLLDC 230
            +    L    G  LG+ FQLADDLLD 
Sbjct: 255 ASAARDLAMSIGLPLGLAFQLADDLLDV 282


>gi|90415703|ref|ZP_01223637.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [marine gamma proteobacterium HTCC2207]
 gi|90333026|gb|EAS48196.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [marine gamma proteobacterium HTCC2207]
          Length = 339

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 13/173 (7%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A RY     GK  R+ L         +N    L   AA E +H  SLIHDD+   D 
Sbjct: 38  LAPAARYHFKNPGKSFRAQLALTSGVSLGLNTQDNLHWAAACELLHNASLIHDDIS--DA 95

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG+ ++H  +    A+  G+ ++  AFE+ +      ++ +    +++L     +Q
Sbjct: 96  STHRRGQESIHQHFGADMALCLGDWMVAKAFELGA------RNALYGGKLVTLLAQ-AMQ 148

Query: 158 GMLGGQMLDI-QDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEK 207
               GQ+ DI Q E  +      I K KT  L+    +  AI A  +A QNEK
Sbjct: 149 ETCSGQISDITQRECANLDDWQRIAKGKTAPLLIAPIKGAAIAAGLNAEQNEK 201


>gi|322691366|ref|YP_004220936.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456222|dbj|BAJ66844.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 360

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 31/205 (15%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK++R+ L  +   +   +     R     +  AIE     +L+HDD+  +D   +RRG
Sbjct: 52  GGKRLRALLALDAFDILAGDVTPDWRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRG 109

Query: 104 KPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTHN 153
           KP+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++   
Sbjct: 110 KPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQRE 169

Query: 154 IGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           + +     GQ+LD+  E                + + KT +    A    A++A     +
Sbjct: 170 VEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPD 224

Query: 207 KER--LRCFGENLGIIFQLADDLLD 229
           + R      G  LG+ FQLADDLLD
Sbjct: 225 QARHCALAVGRPLGLAFQLADDLLD 249


>gi|317179364|dbj|BAJ57152.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F30]
          Length = 307

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S            +L+     N  L+   G    +I+D F+      D+ + + I + KT
Sbjct: 117 SK---------MGELIAQALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|294817076|ref|ZP_06775718.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064]
 gi|326446035|ref|ZP_08220769.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294321891|gb|EFG04026.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064]
          Length = 385

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 19/226 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
            D L L    H+  + +  L++ +R+ +  GG++ R  LV     L          + AA
Sbjct: 35  WDGLDLALHGHVADRLHRALVAPVRHLIDHGGRRWRPALVAHTIELLGGAPERFGPLVAA 94

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E  H  SL+ DD+   D   +RRG+PT H  +    A+ AG     +AF+         
Sbjct: 95  LELAHTGSLVVDDV--EDGSAVRRGRPTAHAAFGTAVALNAGTAAY-FAFDRAIDLTLPD 151

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ET-----QVFMIQKMKT 185
             ++  +L       +    M  GQ LD+Q    +        E+      V +  ++K+
Sbjct: 152 DSDLAGELRALFLAALRAAHM--GQALDLQGHHPELEHALTSGESAPVLHSVRLTHRLKS 209

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           G L+       A++  A       L  FG  LG  +Q+ DD  D E
Sbjct: 210 GTLVAAGFTMAALVTCAPPALVGALTDFGMALGTAYQITDDTADLE 255


>gi|238879551|gb|EEQ43189.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Candida albicans WO-1]
          Length = 507

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 53/207 (25%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ LL  A      
Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256

Query: 128 ------FEIISS-------------PKTQLKDNIRSQL---------------MLSLTHN 153
                  E++S+               T L++N   ++               + +  H 
Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316

Query: 154 IGLQGML----GGQMLD---IQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHA 202
             +Q       GG   D   + D  I+    F     KT     +LM  +C + A+++ A
Sbjct: 317 YSVQQQQRTTNGGDSADAAVVVDHEINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGA 376

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229
             +  E    FG NLG+ FQ+ DD+LD
Sbjct: 377 QDDIIENCYQFGRNLGLCFQIVDDMLD 403


>gi|210134440|ref|YP_002300879.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12]
 gi|210132408|gb|ACJ07399.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12]
          Length = 307

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAKAL-SNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              M  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFMEASLKSMAILL----NKDAKMYADFGLNFGMEFQIIDDLLDITQD 208


>gi|254778946|ref|YP_003057051.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Helicobacter pylori B38]
 gi|254000857|emb|CAX28789.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Helicobacter pylori B38]
          Length = 307

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   I S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGEAIA-QILSNAVLRLSRG------------EIEDVFVGGSFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208


>gi|93278762|pdb|2AZL|A Chain A, Crystal Structure For The Mutant F117e Of Thermotoga
           Maritima Octaprenyl Pyrophosphate Synthase
          Length = 299

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  A   +     
Sbjct: 68  AALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAEHTVE---- 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
           ++ +N   +L  +  + IG   M   ++++    +  I + +   I + K+GAL   A +
Sbjct: 122 EIGNN---KLRRAFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQ 176

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++        E L   G  +G I+Q+ DD++D
Sbjct: 177 LPALLEGELG---EDLYNLGVTIGTIYQMFDDIMD 208


>gi|320163837|gb|EFW40736.1| geranyltranstransferase [Capsaspora owczarzaki ATCC 30864]
          Length = 347

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 33/241 (13%)

Query: 16  IDTILDDLLLQTASHMQT-QHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
            DT++ D++    +  +T + + + +S  ++Y + GGK  R   V     +     LT  
Sbjct: 14  FDTLVADVMDVAVNQYETPKESQQWMSENLKYNVPGGKMNRGLSVVSTYEILLGRPLTKD 73

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A  +G ++E +  + L+ DD+  MD    RRG+P  + +  EV+ I   +     +
Sbjct: 74  ELFKAQVLGWSVEWLQAFFLVADDM--MDQSQTRRGQPCWYKK-PEVSNIAIND-----S 125

Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180
           F I  S    LK   RS+     +L L H +  Q  LG QMLD+    ++ +D T+ F +
Sbjct: 126 FVIEGSIYILLKKYFRSEPYYVDLLDLLHEVTFQTELG-QMLDLITAPEDHVDLTR-FTL 183

Query: 181 QKMKT-----GALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDCEE 232
            K KT      A+  F       M  A                 +G  FQ+ DD LDC  
Sbjct: 184 SKYKTIVKYKTAVYSFYLPVAMAMHMAGVKNPAAFAAAHSILMEMGEFFQIQDDYLDCYG 243

Query: 233 D 233
           D
Sbjct: 244 D 244


>gi|28572702|ref|NP_789482.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27]
 gi|28410834|emb|CAD67220.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei
           TW08/27]
          Length = 354

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 41/232 (17%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALR-VGAAIECIHCYSLI 88
           ++H + +   ++    GGK++R+   F   EC      N    +  +  AIE  H  +L+
Sbjct: 21  SKHTESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENLFELISDIAVAIELFHAAALV 80

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS 132
           HDDL  +D    RRG P VH ++ +                 +AI+AG+ LL ++     
Sbjct: 81  HDDL--IDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTASAILAGDMLLVWSSRFFY 138

Query: 133 SPKTQLKDNIRSQ-------LMLSLTHNIGLQGMLGGQM----------LDIQDEFIDET 175
           S    L +    Q        M  L H +  + ++G  M          L +Q E +D +
Sbjct: 139 SALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQLSVQ-EALDIS 197

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +  MI+K    ++    C  GA    A+    E L+ F   +G+ FQ+ +D+
Sbjct: 198 KEIMIKKSGKYSVQVPLC-LGANTNGATIEHLEVLKRFSLPIGLAFQMRNDI 248


>gi|295106544|emb|CBL04087.1| farnesyl-diphosphate synthase /geranylgeranyl-diphosphate synthase
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 349

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 5/188 (2%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y+  GGK+ R  +          +   A    AAIE  H  +LIHDD+   D   +RRG+
Sbjct: 56  YSQNGGKRHRPLICFAACRAVGGDMARATSAAAAIEHFHTAALIHDDI--ADEAELRRGE 113

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLG 161
           P +H+      AI  G+  L+     +I+ P       +R  ++L+      I  Q +  
Sbjct: 114 PCLHLTEGMGLAINMGDLALSLVNGTVINDPLLDDATKVRVVNELIEMTRRTIEGQALDI 173

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           G   D + +   E  + M                GAI+   ++ E E LR +G + G+ F
Sbjct: 174 GWARDGRYDITPEDYLVMATHKTAHYSGAVPLAIGAIIGGGTEAEIEALRNYGLDTGLAF 233

Query: 222 QLADDLLD 229
           Q+ DDLL+
Sbjct: 234 QIQDDLLN 241


>gi|227547664|ref|ZP_03977713.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|227211919|gb|EEI79815.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum subsp. infantis ATCC 55813]
          Length = 360

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 31/205 (15%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK++R+ L  +   +   +     R     +  AIE     +L+HDD+  +D   +RRG
Sbjct: 52  GGKRLRALLALDAFDVLAGDVTPDWRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRG 109

Query: 104 KPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTHN 153
           KP+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++   
Sbjct: 110 KPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQRE 169

Query: 154 IGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           + +     GQ+LD+  E                + + KT +    A    A++A     +
Sbjct: 170 VEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPD 224

Query: 207 KER--LRCFGENLGIIFQLADDLLD 229
           + R      G  LG+ FQLADDLLD
Sbjct: 225 QARHCALAVGRPLGLAFQLADDLLD 249


>gi|302549101|ref|ZP_07301443.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
 gi|302466719|gb|EFL29812.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
          Length = 350

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 18/196 (9%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A  GGK +R  L    A +        +    A+E +H +SL+HDD+  MD    RR +P
Sbjct: 66  AAPGGKGVRQALAVLGAEVAGAPARAGVAAAVAVELVHTFSLLHDDI--MDGDADRRRRP 123

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            V   Y    A++AG+ L   A E +++ +    + +R       T +  L  ++ GQ  
Sbjct: 124 AVWKAYGTGPAVLAGDALFALAVETLAA-QPGGAEAVR-------TLSAALGDLVRGQAD 175

Query: 166 DI--------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           D+          E +   +   + + KTGAL+  A   GA +  A+      L   G +L
Sbjct: 176 DLLFTERPWTGPERVRPDEYRAVAEHKTGALLGCAAALGAALGGAAPETVAALDRVGRHL 235

Query: 218 GIIFQLADDLLDCEED 233
           GI FQ+ DD+L    D
Sbjct: 236 GIAFQIVDDVLGIWGD 251


>gi|159901006|ref|YP_001547253.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894045|gb|ABX07125.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 339

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 8/183 (4%)

Query: 50  GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  F +  CA++   +   A  + AAI+ +H +SLIHDD+   D+   RRG+ TV 
Sbjct: 50  GKLLRPRFCLLACAAV-GGDPQQAEPLAAAIQLLHDFSLIHDDIE--DHSPTRRGRETVW 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             ++   AI  G+G+ T A ++      ++       + ++   N  +  +  GQ LD+ 
Sbjct: 107 KLWEVPQAINVGDGMFTLA-QLSLFRLAEVGVESSVVVEIARRFNQTIIRLCEGQYLDMS 165

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    I E     +   KT AL+  A   GAI+ +A++ +   L  +GE LG+ FQ+ D
Sbjct: 166 FEQRLDISEGDYLAMISRKTAALIAAAAGLGAILGNANREQAAALYNWGEALGLAFQIED 225

Query: 226 DLL 228
           D+L
Sbjct: 226 DML 228


>gi|261837687|gb|ACX97453.1| octaprenyl-diphosphate synthase [Helicobacter pylori 51]
          Length = 307

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S            +L+     N  L+   G    +I+D F+      D+ + + I + KT
Sbjct: 117 SK---------MGELIAQALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|115375696|ref|ZP_01462950.1| IdsA [Stigmatella aurantiaca DW4/3-1]
 gi|310825166|ref|YP_003957524.1| polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115367259|gb|EAU66240.1| IdsA [Stigmatella aurantiaca DW4/3-1]
 gi|309398238|gb|ADO75697.1| Polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 391

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 22/197 (11%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y L   K +R  L              ALR   A+E  H   LIHDD+   D  ++RRG+
Sbjct: 46  YPLREAKGLRPALCIAACRASGGTLEAALRPAVALELYHNAFLIHDDI--EDESHLRRGR 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI------RSQLMLSLTHNIGLQG 158
           PT+H  +    AI  G+ +L  + +        L DNI       S  +L     +  + 
Sbjct: 104 PTLHQLHGVPVAINVGDAMLALSLQ-------PLLDNIGFIGLGPSLRILQEVARMARES 156

Query: 159 MLGGQMLDI------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              GQ L++           D   V M+++             GA+ A  +     +L  
Sbjct: 157 A-EGQALELDWIRRGHWALEDADYVRMVEQKTCWYSFITPVTLGALAARQNPAHTAQLAE 215

Query: 213 FGENLGIIFQLADDLLD 229
           F   LGI FQ+ DDLL+
Sbjct: 216 FARCLGIAFQIQDDLLN 232


>gi|242815971|ref|XP_002486676.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218715015|gb|EED14438.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 960

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 13/183 (7%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L GK +RS L+    +   V   +   +   I  +H  SL+ DD+   D   +RRG+P  
Sbjct: 682 LPGKNMRSQLIQSFNTWLQVPAESLAIIDKVISMLHTASLLIDDI--QDQSLLRRGQPVA 739

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-D 166
           H  +    A+ +GN +   A   I   ++     I    ++ L    G++      ++  
Sbjct: 740 HSIFGTAQAMNSGNYVYFLALREIQKLQSPKAITIYVDSLIDLHRGQGMELFWRDSLMCP 799

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++E++D     M+   KTG L C A +    +  A    K         LGIIFQ+ DD
Sbjct: 800 TEEEYLD-----MVAN-KTGGLFCLAIQ----LMQAEATVKVDFVPLVRLLGIIFQICDD 849

Query: 227 LLD 229
            L+
Sbjct: 850 YLN 852


>gi|11322972|emb|CAC16851.1| geranyl diphosphate synthase [Citrus sinensis]
          Length = 321

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)

Query: 38  RLLSAIRYAL---LGGKKIRSFLVTECASLFNVN------------HLTALR-----VGA 77
           +L SA  Y     + GK+ R  ++   A+  NV               T LR     +  
Sbjct: 8   KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDASATELRTRQQCIAE 67

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   ++S K  
Sbjct: 68  ITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT 125

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               + + L   + H +  + M   QM    D+             KT +L+  +C++ A
Sbjct: 126 ---EVVTLLATVVEHLVTGETM---QMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIA 179

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++A  +         +G+NLG+ +QL DD+LD
Sbjct: 180 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLD 211


>gi|261839097|gb|ACX98862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 52]
          Length = 307

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  + +  A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGDFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S            +L+     N  L+   G    +I+D F+      D+ + + I + KT
Sbjct: 117 SK---------MGELIAKTLSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|195624250|gb|ACG33955.1| decaprenyl-diphosphate synthase subunit 1 [Zea mays]
          Length = 428

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++    L 
Sbjct: 177 EMIHVASLLHDDV--LDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA----LG 230

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
           +     LM +      ++ ++ G+ + I         + + +QK   KT +L+  +C++ 
Sbjct: 231 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAV 285

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AI+A  +         +G NLG+ FQL DD+LD
Sbjct: 286 AILAGHTTEVSVLAYEYGRNLGLAFQLIDDVLD 318


>gi|227504679|ref|ZP_03934728.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum
           ATCC 6940]
 gi|227198689|gb|EEI78737.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum
           ATCC 6940]
          Length = 363

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 37/212 (17%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDN 97
           + L GGK+IR       A     + L +           +++E I   +LIHDD+  +D+
Sbjct: 48  FVLDGGKRIRPTYA--WAGFLGAHGLESGEDAQAMATAASSLEFIQACALIHDDI--IDS 103

Query: 98  GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG PTVH                  + +  AI+ G+  L +A +++          
Sbjct: 104 SDTRRGNPTVHRAVAAQHRAKGYHGDADFFGQSVAILVGDLALAWAEDMLQGSGLSGAAL 163

Query: 142 IRSQLMLSLTHNIGLQG-MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----G 196
            R++   S     G++  ++GGQ+LDI  E      + +   +       +  E     G
Sbjct: 164 HRARGPWS-----GMRTEVIGGQILDISLEAAGSEDLALANSVNRYKTAAYTIERPLHLG 218

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A +A A     +  R +G ++GI FQL DD L
Sbjct: 219 AAVAGAEPALIDAFRGYGRDIGIAFQLRDDQL 250


>gi|219847821|ref|YP_002462254.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
 gi|219542080|gb|ACL23818.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
          Length = 361

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 16/148 (10%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY-AFEIISSPKTQLKDNIRS 144
           SL+HDDL  +D    RRG+ TVH ++D   A++ G+      A E+  SP  ++      
Sbjct: 120 SLVHDDL--VDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPRII----- 172

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAH 201
                  +   +Q +  G++  +   E +D    Q       KT  L   AC++G +   
Sbjct: 173 -----TFYAEAVQTICEGELSPVTVAEPLDRALRQYLYKTGAKTAVLFEAACKAGMVSGG 227

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLD 229
            S ++   L  +G +LG+ FQ+ DD+LD
Sbjct: 228 GSDDQILALGRYGYDLGMAFQIIDDVLD 255


>gi|28493184|ref|NP_787345.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str.
           Twist]
 gi|28476225|gb|AAO44314.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str.
           Twist]
          Length = 379

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 41/232 (17%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALR-VGAAIECIHCYSLI 88
           ++H + +   ++    GGK++R+   F   EC      N    +  +  AIE  H  +L+
Sbjct: 46  SKHTESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENLFELISDIAVAIELFHAAALV 105

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIIS 132
           HDDL  +D    RRG P VH ++ +                 +AI+AG+ LL ++     
Sbjct: 106 HDDL--IDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTASAILAGDMLLVWSSRFFY 163

Query: 133 SPKTQLKDNIRSQ-------LMLSLTHNIGLQGMLGGQM----------LDIQDEFIDET 175
           S    L +    Q        M  L H +  + ++G  M          L +Q E +D +
Sbjct: 164 SALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQLSVQ-EALDIS 222

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +  MI+K    ++    C  GA    A+    E L+ F   +G+ FQ+ +D+
Sbjct: 223 KEIMIKKSGKYSVQVPLC-LGANTNGATIEHLEVLKRFSLPIGLAFQMRNDI 273


>gi|184201731|ref|YP_001855938.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201]
 gi|183581961|dbj|BAG30432.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201]
          Length = 382

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 70/231 (30%)

Query: 47  LLGGKKIR---------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L GGK IR         SF      ++ +V     +R+ A+ E +H   L+HDD+  +D 
Sbjct: 68  LAGGKLIRPRLTLIAWRSFTAPAGGAVPSVPDAQCVRLAASFEMLHAALLVHDDV--VDR 125

Query: 98  GYIRRGKPTVHIQY-----------------DEVTAIIAGN------------------- 121
            + RRG+PTV   +                  E  AI+AG+                   
Sbjct: 126 DWRRRGRPTVGELFRRDAAAAGAPAHEAEHAGESAAILAGDLLLAGALRLASTCTGDPAT 185

Query: 122 --GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
              +    FE +++      D+    L+LSL          G +   +QD       +  
Sbjct: 186 SRAVADVVFEAVTASAAGELDD----LLLSLHR-------FGAEHPGVQD-------ILD 227

Query: 180 IQKMKTGALMCFAC--ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           ++++KT A   F     +G+++A AS  E E+L   G  LG+ +Q+ DD+L
Sbjct: 228 MERLKT-ATYSFEAPLRAGSLLAGASAEESEQLAHAGALLGVGYQVVDDVL 277


>gi|242096724|ref|XP_002438852.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor]
 gi|241917075|gb|EER90219.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor]
          Length = 431

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++    L 
Sbjct: 180 EMIHVASLLHDDV--LDDADTRRGVSSLNLIMGNKLSVLAGDFLLSRACVALAA----LG 233

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
           +     LM +      ++ ++ G+ + I         + + +QK   KT +L+  +C++ 
Sbjct: 234 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMEYYLQKTYYKTASLISNSCKAV 288

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AI+A  +         +G NLG+ FQL DD+LD
Sbjct: 289 AILAGHTAEVSVLAYEYGRNLGLAFQLIDDVLD 321


>gi|237832673|ref|XP_002365634.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma
           gondii ME49]
 gi|211963298|gb|EEA98493.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma
           gondii ME49]
          Length = 536

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 21/188 (11%)

Query: 61  CASLFNVNHLTALRVGAAI------ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           C + F+    T  + G  +      E IH  SL+HDD+  +D    RRG+P  H ++   
Sbjct: 218 CGAAFSAKSQTRRKDGLELCMVHVAELIHTASLMHDDV--IDGADTRRGQPATHRRFCNK 275

Query: 115 TAIIAGNGLLTY---------AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TAI+ G+ LL+          + E++    + ++  ++ +L+ +L+ + G  G    +  
Sbjct: 276 TAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAEST 335

Query: 166 DIQDEFIDET---QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           +   E +      + ++ +   KT +L+  +C   AI+             FG  +G+ F
Sbjct: 336 EPLREHLKRKSALRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAF 395

Query: 222 QLADDLLD 229
           QL DD LD
Sbjct: 396 QLYDDELD 403


>gi|91076666|ref|XP_971444.1| PREDICTED: similar to AGAP006894-PA [Tribolium castaneum]
 gi|270002646|gb|EEZ99093.1| hypothetical protein TcasGA2_TC004978 [Tribolium castaneum]
          Length = 307

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 25/214 (11%)

Query: 26  QTASHMQTQHNDR-----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +TA  + ++ ND+     LL    Y +   GK IRS L        N++      +   +
Sbjct: 6   KTAPCVYSRDNDKCQDEKLLQPFTYIMQTPGKNIRSKLARAFNYWLNISEEKLKAIEEIV 65

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+ DD+   DN  +RRG P  H  Y   + I A N ++  A + +        
Sbjct: 66  EMMHNASLLLDDI--QDNSILRRGVPVAHSIYGVPSTINAANYVIFIALQRVLELNHPEA 123

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACES 195
            ++ +Q +L L    G++       +  +D +     DE +   I+  KTG L   A   
Sbjct: 124 VSVYTQQVLELHRGQGME-------IYWRDSYTCPTEDEYKQMTIR--KTGGLFMLAIR- 173

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +M   S+N+ +  +  G  LG+ FQ+ DD L+
Sbjct: 174 --LMQLFSENKADYTKLTG-ILGLFFQIRDDFLN 204


>gi|27261729|gb|AAN86061.1| geranylgeranyl diphosphate synthase [Citrus unshiu]
          Length = 426

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   ++S K    
Sbjct: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNT-- 230

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             + + L   + H +  + M   QM    D+             KT +L+  +C++ A++
Sbjct: 231 -EVVTLLATVVEHLVTGETM---QMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 286

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A  +         +G+NLG+ +QL DD+LD
Sbjct: 287 AGQTAEVAILAFDYGKNLGLAYQLIDDVLD 316


>gi|320449550|ref|YP_004201646.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01]
 gi|320149719|gb|ADW21097.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01]
          Length = 330

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 16/207 (7%)

Query: 35  HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H D    A+   Y   GGK +R  LV             +L  G A+E    + LIHDD+
Sbjct: 22  HPDPAYQALLQEYPSRGGKMLRGLLVVYAGLAHGATLEASLWAGTALELFQNWVLIHDDI 81

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              D    RRG+P +H  Y    A+ AG+ L    + ++      L + +    +L+  H
Sbjct: 82  --EDGSEERRGRPALHRLYPMPLALNAGDALHGEMWGLLIR---GLNEGLFGPEVLAEFH 136

Query: 153 NIGLQGMLGGQMLDI------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            + +     GQ LD+      + +   E  + M+               GA++  + +  
Sbjct: 137 QV-VHRTAYGQHLDLLWTLSGRLDLAPEDYLHMVAHKAAYYTAVAPLRLGALL--SGKTP 193

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
                  G  LGI FQ+ DD+L+ E D
Sbjct: 194 PALYEEAGLKLGIAFQIMDDVLNLEGD 220


>gi|256371287|ref|YP_003109111.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007871|gb|ACU53438.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 362

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 28/199 (14%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R  L    A    V+    L +G    AIE +H ++L+HDD+  MD   +RRG  
Sbjct: 62  GGKRLRPALAFWAARGLGVDGDDEL-LGDLLVAIELLHTFALVHDDI--MDRSELRRGAV 118

Query: 106 TVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           TVH +                Y +   I+ G+  LT A   + +    ++    +QL L 
Sbjct: 119 TVHARARDEHRSLKLRGEAETYGDAIGILVGDLALTLADGALEAAPLPVRATF-TQLKLE 177

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     L  +   Q+ D   E  +   +F   K      +      GA++A  +      
Sbjct: 178 VNLGQYLDVVASAQLFDTP-EHAEHIALFKSAKYTVERPLHL----GALLADPADGVLAA 232

Query: 210 LRCFGENLGIIFQLADDLL 228
           L  F   LG+ FQL DD+L
Sbjct: 233 LSRFALPLGLAFQLRDDVL 251


>gi|317482452|ref|ZP_07941469.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916112|gb|EFV37517.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 360

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +     +T  R  A      AIE     +L+HDD+  +D   +RR
Sbjct: 52  GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108

Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
           GKP+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++  
Sbjct: 109 GKPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 168

Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + +     GQ+LD+  E                + + KT +    A    A++A     
Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223

Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229
           ++ R      G  LG+ FQLADDLLD
Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249


>gi|297379465|gb|ADI34352.1| octaprenyl-diphosphate synthase [Helicobacter pylori v225d]
          Length = 307

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S     +   + S  +L L+    ++ M  G+  +      D+ + + I + KT   +  
Sbjct: 117 SKMGESIAQTL-SNAVLRLSRG-EIEDMFVGECFNS-----DKQKYWRILEDKTAHFIEA 169

Query: 192 ACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
           + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 170 SLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|308063102|gb|ADO04989.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Sat464]
          Length = 307

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAQTL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDTKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|317012084|gb|ADU82692.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Helicobacter pylori
           Lithuania75]
          Length = 307

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 31/182 (17%)

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           T+  SL  V +L A+     +E I   SL+HDD+  +D   +RR  P+++  +    A++
Sbjct: 51  TDAISLDKVFNLCAI-----VEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVM 103

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------ 172
            G+   + AF  +S     +   I S  +L L+              +I+D F+      
Sbjct: 104 LGDVFYSKAFFELSKMGEAIA-QILSNAVLRLSRG------------EIEDVFVGESFNS 150

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCE 231
           D+ + + I + KT   +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  
Sbjct: 151 DKQKYWRILEDKTAHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDIT 206

Query: 232 ED 233
           +D
Sbjct: 207 QD 208


>gi|312132590|ref|YP_003999929.1| ispa [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773533|gb|ADQ03021.1| IspA [Bifidobacterium longum subsp. longum BBMN68]
          Length = 360

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +     +T  R  A      AIE     +L+HDD+  +D   +RR
Sbjct: 52  GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108

Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
           GKP+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++  
Sbjct: 109 GKPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 168

Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + +     GQ+LD+  E                + + KT +    A    A++A     
Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223

Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229
           ++ R      G  LG+ FQLADDLLD
Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249


>gi|308061594|gb|ADO03482.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Cuz20]
          Length = 307

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAQTL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|239928994|ref|ZP_04685947.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 308

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 14/163 (8%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A  +++       
Sbjct: 99  ELVHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDADAILAGDALQALALGLLAEDPHPAA 156

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACE 194
               ++L   +        +  GQ  D   E     +V + + +     KTGAL+  AC 
Sbjct: 157 PAAAARLAHCVVE------LCAGQHTDTAMERRGPGEVTLAETLTMAEAKTGALLGCACA 210

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
            GA+ A A   +   L  FG   G+ FQL DD++    D P++
Sbjct: 211 IGALYADAEDADVAALDAFGREAGLAFQLIDDVIGIWGD-PRR 252


>gi|149918648|ref|ZP_01907136.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
 gi|149820489|gb|EDM79903.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
          Length = 388

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 13/194 (6%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y L   K +R  L    A     +   AL   AA+E +H   LIHDD+   D    RRG+
Sbjct: 46  YPLRAAKGLRPALCVAAARALGASRSAALPSAAALELLHNAFLIHDDVE--DESLARRGE 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFE--------IISSPKTQLKDNIRSQLMLSLTHNIG- 155
           PT+  +Y + TA+  G+ +L  A          I   P  ++ D +R  ++++       
Sbjct: 104 PTLQRRYGQATAMNMGDAMLALALGPLLDNTGVIGLGPALEVLDLVRETVVVTAAGQARE 163

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           L+ +  G+  D   ++    +  ++ K    + +      GA +A    + + +L  +  
Sbjct: 164 LEWIRQGRW-DFGSDYAAAYEALVVAKTAHYSFITPVV-VGATIAEVRGDARAQLAAYAR 221

Query: 216 NLGIIFQLADDLLD 229
           ++G+ FQ+ DDLL+
Sbjct: 222 HVGVAFQITDDLLN 235


>gi|14625010|dbj|BAB61885.1| geranylgeranyl diphosphate synthase [Rhodovulum strictum]
          Length = 131

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           HDD+P MDN  +RRGKP +H  Y E  A++ G+ L+   FE++
Sbjct: 1   HDDMPCMDNADLRRGKPALHKAYGEPLALLTGDSLIVAGFEVL 43


>gi|217074292|gb|ACJ85506.1| unknown [Medicago truncatula]
          Length = 146

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)

Query: 157 QGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + +    ++  I   KT AL+  A   GAI+   S  + E+LR F
Sbjct: 1   EGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKF 60

Query: 214 GENLGIIFQLADDLLDC 230
              +G++FQ+ DD+LD 
Sbjct: 61  ATYIGLLFQVVDDILDV 77


>gi|55792579|gb|AAV65383.1| plastid geranylgeranyl diphosphate synthase [Prototheca
           wickerhamii]
          Length = 195

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAA 78
           L D  L  A+ +Q  + +RL SA+RY+LLGG K++R  L      L       A+    A
Sbjct: 84  LVDAALDVAAPLQ--YPERLHSAMRYSLLGGGKRVRPALCLAACELVGGCLEVAMPAACA 141

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +E IH  SLIHDDLP+MD+  +RRG+P  H  + E
Sbjct: 142 VEMIHTMSLIHDDLPAMDDDDVRRGQPANHRAFGE 176


>gi|271964292|ref|YP_003338488.1| farnesyltranstransferase [Streptosporangium roseum DSM 43021]
 gi|270507467|gb|ACZ85745.1| putative farnesyltranstransferase [Streptosporangium roseum DSM
           43021]
          Length = 355

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 53/248 (21%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALR 74
           +D  L + + +    +       L+SA    L GGK++R +F           +      
Sbjct: 15  VDRSLKEFVERQLPQVSAPEVAPLISAAEEFLAGGKRLRPAFCYWGWRGAGGGDDPALFT 74

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAII 118
             A++E +   +L+HDD+  MD   +RRG P  H                 Q+ E  AI+
Sbjct: 75  AAASLELLQASALVHDDV--MDASDLRRGMPAAHRRFQTLHEKAGWHGSAEQFGEGAAIL 132

Query: 119 AGNGLLTYAFEIISS----PKT-----QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            GN +L ++ E+       P +     Q+ D++R++LM              GQ LD+ +
Sbjct: 133 LGNLMLIWSGEMWRGSGLPPASLAAAQQVHDHMRTELMC-------------GQYLDLLE 179

Query: 170 EFIDET---QVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRC--FGENLGII 220
           +   E        +   K+G    ++ E     G ++A   +       C  +G ++GI 
Sbjct: 180 QAHGENTFDSALRVALFKSGK---YSVEQPLRLGLVLAARGRAPWIDRLCEEYGRSVGIA 236

Query: 221 FQLADDLL 228
           FQL DD+L
Sbjct: 237 FQLRDDIL 244


>gi|301310937|ref|ZP_07216866.1| putative polyprenyl synthetase [Bacteroides sp. 20_3]
 gi|300831000|gb|EFK61641.1| putative polyprenyl synthetase [Bacteroides sp. 20_3]
          Length = 518

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 7/162 (4%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R   A+EC H  SL+HDD+   DN   R GKPT++  Y    AI  G+ LL   + ++S 
Sbjct: 277 RAAIAVECFHKASLVHDDI--QDNDKERYGKPTINALYGVPIAINVGDILLGEGYRLLSL 334

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
              +    + +   ++L      QGM     +  +   +D   V  I   KT      + 
Sbjct: 335 CDARALTAVAADAHIALCKG---QGMELEWSVSPRPLTLD--WVLEIFCNKTVPAFEVSL 389

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             G I A   +  +     +   LGI +QL DD+ D ++D P
Sbjct: 390 VLGLICAGDDEVLRRIFHQYSRALGIAYQLLDDIEDFKDDRP 431


>gi|23465984|ref|NP_696587.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum NCC2705]
 gi|23326700|gb|AAN25223.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [includes: farnesyl pyrophosphate synthetase (Fpp
           synthetase) (dimethylallyltransferase);
           geranyltranstransferase ] [Bifidobacterium longum
           NCC2705]
          Length = 372

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +     +T  R  A      AIE     +L+HDD+  +D   +RR
Sbjct: 64  GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 120

Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
           GKP+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++  
Sbjct: 121 GKPSAHHALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 180

Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + +     GQ+LD+  E                + + KT +    A    A++A     
Sbjct: 181 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 235

Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229
           ++ R      G  LG+ FQLADDLLD
Sbjct: 236 DQARHCALAVGRPLGLAFQLADDLLD 261


>gi|269219432|ref|ZP_06163286.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211128|gb|EEZ77468.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 363

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 37/216 (17%)

Query: 39  LLSAIRYALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
            L   R  L GGK+ R+ L+     CA+    +   A+  GAA E     +LIHDD+  +
Sbjct: 41  FLDPARRLLSGGKRTRAALLAAGYACAT--AEDREPAISAGAAAELYQTSALIHDDI--L 96

Query: 96  DNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           D    RR +P+ H+                 +   +AI+ G+ LL+ + E  +    Q+ 
Sbjct: 97  DAASTRRSQPSAHVALARLHLSGGWSGDRAHFGTSSAILLGDFLLSLSTEAFADACAQVG 156

Query: 140 DNI-RSQL--MLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VFMIQKMKTGALMC 190
               R+ L     +T  +       GQ LDI+ E            + ++        + 
Sbjct: 157 PRASRAALRAFARMTTEVAF-----GQYLDIRAENAPPAADSVGAALSVVAHKSARYSVV 211

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           F    GA++A AS +  + L   G  LG  FQL DD
Sbjct: 212 FPLRIGALLAGASGDVLDLLERVGAPLGEAFQLRDD 247


>gi|12055493|emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur]
          Length = 416

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   ++S
Sbjct: 159 RIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 216

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            K      + S L   + H +  + M   QM    ++             KT +L+  +C
Sbjct: 217 LKNT---EVVSLLAKVVEHLVTGETM---QMTTTCEQRCSMEYYMQKTYYKTASLISNSC 270

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++ A++   +         +G+NLG+ +QL DD+LD
Sbjct: 271 KAIALLGGQTSEVAMLAYEYGKNLGLAYQLIDDVLD 306


>gi|308182415|ref|YP_003926542.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           PeCan4]
 gi|308064600|gb|ADO06492.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           PeCan4]
          Length = 307

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAQTL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|164605008|dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+   +A+  +H  +  H++LP  D         T    Y     ++  +G++ Y FE++
Sbjct: 101 AMAAASALRLVHASASTHENLPLTDRPRPMPR--TRPTLYGPNIELLIADGIIPYGFELL 158

Query: 132 SSPKTQLKDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ------KM 183
           +      ++N    L  ++ ++  +G QG++ GQ  + Q E  +  ++F +       + 
Sbjct: 159 ARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNVCRK 218

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           K G L   A   GAI+   S++E E+LR +G  +G++
Sbjct: 219 KEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMV 255


>gi|159039018|ref|YP_001538271.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
 gi|157917853|gb|ABV99280.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
          Length = 360

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 58/253 (22%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIR-----YALLGGKKIR---SFLVTECASLF 65
           +R+D  L D L    + M     D  L+ +      + L GGK++R   ++     A   
Sbjct: 17  QRVDKALADFLAARRTWMT--DVDGSLAPVADAVEAFVLGGGKRLRPAFAYWGYRGAGGI 74

Query: 66  NVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------- 111
           +   + TAL   AA+E +   +LIHDDL  MD    RRG+P VH+++             
Sbjct: 75  DTEQVATAL---AALEFVQASALIHDDL--MDRSDTRRGEPAVHLRFAAQHRSAGWDGDA 129

Query: 112 ---DEVTAIIAGNGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGM 159
               +  AI+ G+  L ++ E++ S    P+T  +     D +RS++ +           
Sbjct: 130 DGFGDAAAILLGDLCLVWSDELLHSAGLDPRTVARARPIFDQMRSEVTV----------- 178

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGE 215
             GQ LD+  +   +T V    K+       +  E   ++  A  +    +      +G 
Sbjct: 179 --GQYLDVLTQATGDTSVEWAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSTYGL 236

Query: 216 NLGIIFQLADDLL 228
            LG  FQL DD+L
Sbjct: 237 PLGEAFQLRDDVL 249


>gi|291437332|ref|ZP_06576722.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
 gi|291340227|gb|EFE67183.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
          Length = 384

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A  +++       
Sbjct: 175 ELVHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDADAILAGDALQALALGLLAEDPHPAA 232

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-----KTGALMCFACE 194
               ++L   +        +  GQ  D   E     +V + + +     KTGAL+  AC 
Sbjct: 233 PAAAARLAHCVVE------LCAGQHTDTAMERRGPGEVTLAETLTMAEAKTGALLGCACA 286

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA+ A A   +   L  FG   G+ FQL DD++
Sbjct: 287 IGALYADAEDADVAALDAFGREAGLAFQLIDDVI 320


>gi|221488090|gb|EEE26304.1| polyprenyl synthetase domain-containing protein, putative
           [Toxoplasma gondii GT1]
          Length = 536

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 21/188 (11%)

Query: 61  CASLFNVNHLTALRVGAAI------ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           C + F+    T  + G  +      E IH  SL+HDD+  +D    RRG+P  H ++   
Sbjct: 218 CGAAFSAKSQTRRKDGLELCMVHVAELIHTASLMHDDV--IDGADTRRGQPATHRRFCNK 275

Query: 115 TAIIAGNGLLTY---------AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TAI+ G+ LL+          + E++    + ++  ++ +L+ +L+ + G  G    +  
Sbjct: 276 TAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAESR 335

Query: 166 DIQDEFIDET---QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           +   E +      + ++ +   KT +L+  +C   AI+             FG  +G+ F
Sbjct: 336 EPLREHLKRKSALRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAF 395

Query: 222 QLADDLLD 229
           QL DD LD
Sbjct: 396 QLYDDELD 403


>gi|221508609|gb|EEE34178.1| polyprenyl synthetase domain-containing protein, putative
           [Toxoplasma gondii VEG]
          Length = 536

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 21/188 (11%)

Query: 61  CASLFNVNHLTALRVGAAI------ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           C + F+    T  + G  +      E IH  SL+HDD+  +D    RRG+P  H ++   
Sbjct: 218 CGAAFSAKSQTRRKDGLELCMVHVAELIHTASLMHDDV--IDGADTRRGQPATHRRFCNK 275

Query: 115 TAIIAGNGLLTY---------AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TAI+ G+ LL+          + E++    + ++  ++ +L+ +L+ + G  G    +  
Sbjct: 276 TAILGGDFLLSRGNGIVAMCGSTEVMMRMSSVIESLVKGELIQALSDSRGDLGERQAESR 335

Query: 166 DIQDEFIDET---QVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           +   E +      + ++ +   KT +L+  +C   AI+             FG  +G+ F
Sbjct: 336 EPLREHLKRKSALRTYLTKTYHKTASLIAESCACLAILMGLPSRWVTWSADFGACVGMAF 395

Query: 222 QLADDLLD 229
           QL DD LD
Sbjct: 396 QLYDDELD 403


>gi|330971968|gb|EGH72034.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 190

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 38/71 (53%)

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+  I+D    E     + + KT  L   +  S A + +A Q + E LR FG++LG+ FQ
Sbjct: 17  QLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQ 76

Query: 223 LADDLLDCEED 233
           L DDLLD   D
Sbjct: 77  LVDDLLDYRGD 87


>gi|68072963|ref|XP_678396.1| polyprenyl synthetase [Plasmodium berghei strain ANKA]
 gi|56498851|emb|CAI04198.1| polyprenyl synthetase, putative [Plasmodium berghei]
          Length = 541

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 23/164 (14%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---FEI 130
           ++ AA E IH  SL+HDD+  +D    RRG  ++H +Y    +I++G+ LL  A   F  
Sbjct: 270 KIIAASEIIHMGSLLHDDV--IDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVFAS 327

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM-KTGALM 189
           I  P+   +    S ++ SL     LQ  L    ++      D  + ++I+   KT +L 
Sbjct: 328 IGYPEICKR---FSYVIESLIKGEFLQTNLNYTNIE------DALKTYLIKSYHKTASLF 378

Query: 190 C--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLD 229
              FAC    I   + QN++    CF  G ++G+ FQL DD LD
Sbjct: 379 SHLFAC----IAIISFQNDQITELCFNLGLHIGMAFQLYDDYLD 418


>gi|147901253|ref|NP_001084626.1| hypothetical protein LOC414582 [Xenopus laevis]
 gi|46249832|gb|AAH68912.1| MGC83119 protein [Xenopus laevis]
          Length = 348

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 102/254 (40%), Gaps = 29/254 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
           M   + S+ QE S   + I++DL  + + H +      RL   ++Y  LGGK  R   VT
Sbjct: 1   MKSQVSSERQEFSSYFEQIVEDLAAEDSGHPEVGDAIGRLKEVLQYNTLGGKCNRG--VT 58

Query: 60  ECASLFNV---------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
             AS   +         N   AL VG  +E +  + L+ DD+  MDN   RRG+P  + +
Sbjct: 59  VLASYRELLGPELHKDGNLQRALAVGWCVELLQAFFLVADDI--MDNSVTRRGQPCWYRK 116

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--- 167
             E   + A N        I    +   +       +L L      Q  LG Q LD+   
Sbjct: 117 --EGIGLDAVNDSFLLEACIYRILRKYCRGKPYYLSLLELFLETSYQTELG-QALDLITA 173

Query: 168 QDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHAS---QNEKERLRCFGENLGI 219
           Q   +D     E +   I K KT A   F     A M  A    + E +  +     +G 
Sbjct: 174 QPGKVDLNRYTEKRYKAIVKYKT-AFYSFYLPVAAAMYMAGIDGEEEHKNAKTILLEMGE 232

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD LDC  D
Sbjct: 233 FFQIQDDYLDCYGD 246


>gi|317181549|dbj|BAJ59333.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F57]
          Length = 307

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S            +L+     N  L+   G    +I+D F+      D+ + + I + KT
Sbjct: 117 SK---------MGELIAKALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|307945555|ref|ZP_07660891.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
 gi|307771428|gb|EFO30653.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
          Length = 172

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA +F       + + A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 57  GGKRLRPMLTLACADMFGYRGDGHVVLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEII 131
             +    +++ G+ LL  AF+++
Sbjct: 115 KLWGNQASVLVGDYLLGQAFKMM 137


>gi|255023966|ref|ZP_05295952.1| hypothetical protein LmonocyFSL_12090 [Listeria monocytogenes FSL
           J1-208]
          Length = 248

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 84/155 (54%), Gaps = 14/155 (9%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE IH  S++HDD+    +  +RRG+ T+  ++    A+  G+ L   + E +    TQ
Sbjct: 1   AIELIHMASIVHDDVVDDAD--LRRGRETIKSKWGNHIAMYTGDFLFAKSLEYM----TQ 54

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQ--KMKTGALMCFACE 194
           +KD    +++  +T  +       G++  ++D++  D++    ++  K KT  L+  +C 
Sbjct: 55  IKDVAAHKMLSHVTVELST-----GEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 109

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            G +++  S+ + ++L  FG  +G+ FQ+ DD+LD
Sbjct: 110 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLD 144


>gi|190348241|gb|EDK40664.2| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 329

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 18/178 (10%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           NH T   +   I   H  SL+ DD+   D    RRG P  H +Y   + +  GN +   A
Sbjct: 53  NHDTIATISEVITVFHNSSLLIDDIE--DGSEFRRGLPAAHTKYGVASTLNCGNLMYFVA 110

Query: 128 FEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQ-DEFIDETQVFMIQ 181
            +      P+    DN ++ + LS++ NI ++ +L    GQ LDI   + +  T++  I+
Sbjct: 111 LQTAQQKLPQYHPSDN-KNDIALSIS-NILVEELLNLHHGQGLDIHWRDHLKTTKLPSIE 168

Query: 182 KM------KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +       KTG L   A +   + A ++  ++  +       GI+FQ+ DDL++  +D
Sbjct: 169 EYMEMIMNKTGGLFRLAVK--LLGAFSTPQDEPTVLAIANLFGIVFQIRDDLMNLVDD 224


>gi|296269323|ref|YP_003651955.1| polyprenyl synthetase [Thermobispora bispora DSM 43833]
 gi|296092110|gb|ADG88062.1| Polyprenyl synthetase [Thermobispora bispora DSM 43833]
          Length = 358

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 52/225 (23%)

Query: 39  LLSAIRYALLGGKKIRSFLV----------TECASLFNVNHLTALRVGAAIECIHCYSLI 88
           LL A    L GGK++R              ++ A L+N          A++E +   +LI
Sbjct: 39  LLDAAEAFLSGGKRLRPAFCYWGWRAAGGGSDDARLYNA--------AASLELLQASALI 90

Query: 89  HDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIIS 132
           HDD+  MD   +RRG P+ H                 Q+ E  A++ GN LL +A E+  
Sbjct: 91  HDDV--MDASDVRRGMPSAHRRFERMHLESRWHGSAAQFGENAAVLLGNLLLVWAGEMWR 148

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALM 189
           +     +    +Q +    H+  L  ++ GQ LD+ ++   E        +   K+G   
Sbjct: 149 TSGLPAEALAVAQPV----HDHMLTELMCGQYLDLLEQAQGEGTFDSALRVALYKSGK-- 202

Query: 190 CFACES----GAIMAHASQNEKERLRC--FGENLGIIFQLADDLL 228
            ++ E     G ++A  S+       C  +G+ +GI FQL DD+L
Sbjct: 203 -YSVEQPLRLGLLLAAQSRLPWIDTLCAQYGQRVGIAFQLRDDIL 246


>gi|312376381|gb|EFR23484.1| hypothetical protein AND_12794 [Anopheles darlingi]
          Length = 299

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 28/204 (13%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV------GAAIECIHC 84
           Q + ++ LL    Y   + GK+IRS L         +NH  A+ V      G  ++ +H 
Sbjct: 17  QKEQDETLLQPFAYIQQIPGKQIRSKLA------LAINHWLAIPVEKLAPIGEIVQMLHN 70

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+ DD+   DN  +RRG P  H  Y   + I A N +L  A E +          + +
Sbjct: 71  SSLLIDDIE--DNSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGHPDATKVYT 128

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHA 202
           + +L L    G++       +  +D F    E++   +   KTG L   A     +M   
Sbjct: 129 EQLLELHRGQGME-------IYWRDNFACPTESEYKQMTIRKTGGLFMLAIR---LMQLF 178

Query: 203 SQNEKERLRCFGENLGIIFQLADD 226
           S N+K+        LG+ FQ+ DD
Sbjct: 179 SDNKKD-FSKLAAILGLYFQIRDD 201


>gi|239621275|ref|ZP_04664306.1| probable bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|239515736|gb|EEQ55603.1| probable bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum subsp. infantis CCUG 52486]
          Length = 366

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +     +T  R  A      AIE     +L+HDD+  +D   +RR
Sbjct: 58  GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 114

Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
           G+P+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++  
Sbjct: 115 GRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 174

Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + +     GQ+LD+  E                + + KT +    A    A++A     
Sbjct: 175 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 229

Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229
           ++ R      G  LG+ FQLADDLLD
Sbjct: 230 DQARHCALAVGRPLGLAFQLADDLLD 255


>gi|296138466|ref|YP_003645709.1| trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM
           20162]
 gi|296026600|gb|ADG77370.1| Trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM
           20162]
          Length = 326

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 14/176 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R         +        +   AA+E  H  +L HDD+  MD    RRG P+ +
Sbjct: 48  GGKRFRPMFTILSGRIGGAMSDQVITAAAAMELTHLATLYHDDV--MDEADARRGAPSAN 105

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    AI+AG+    Y F   S+    L       +            ++ GQML+++
Sbjct: 106 ARWGNSIAILAGD----YLFARASAFGADLGPRAVGVIAKCFGE------LVTGQMLELK 155

Query: 169 DEF-IDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
                D  Q ++     KTG+L+      GA+   A ++  +R+   G+ +G+ FQ
Sbjct: 156 GAGESDPVQHYLDTIWGKTGSLIATCGLLGALHGGAEEDLAQRMYRIGDAIGMAFQ 211


>gi|213691849|ref|YP_002322435.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213523310|gb|ACJ52057.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320457944|dbj|BAJ68565.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 360

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +     +T  R  A      AIE     +L+HDD+  +D   +RR
Sbjct: 52  GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108

Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
           G+P+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++  
Sbjct: 109 GRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 168

Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + +     GQ+LD+  E                + + KT +    A    A++A     
Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223

Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229
           ++ R      G  LG+ FQLADDLLD
Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249


>gi|188527047|ref|YP_001909734.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Shi470]
 gi|188143287|gb|ACD47704.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Shi470]
          Length = 307

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|19114211|ref|NP_593299.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe 972h-]
 gi|3287843|sp|O14230|FPPS_SCHPO RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|2330860|emb|CAB11097.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe]
          Length = 347

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%)

Query: 48  LGGKKIRSFLVTECASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           LGGK  R   V +   +          ++ A  +G  +E +  + LI DD+  MD    R
Sbjct: 47  LGGKYNRGLSVIDSYEILLGHPLDEAAYMKAAVLGWMVELLQSFFLIADDI--MDASKTR 104

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQ 157
           RG+P  ++          GN  +  AF + S+    LK + R +     ++ L H++  Q
Sbjct: 105 RGQPCWYLMPG------VGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQ 158

Query: 158 GMLGGQM--LDIQDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERL 210
             LG Q+  L   ++ +D ++ F +QK     +   A   F       M  A     E L
Sbjct: 159 TELGQQLDLLTAPEDSVDLSK-FSLQKHSFIVIYKTAFYSFYLPVALAMHLAGVATPENL 217

Query: 211 RCFGENL---GIIFQLADDLLDCEED 233
           +C  + L   G  FQ+ DD LDC  D
Sbjct: 218 KCAQDILIILGKYFQVQDDYLDCYGD 243


>gi|46191324|ref|ZP_00206770.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bifidobacterium
           longum DJO10A]
 gi|189439158|ref|YP_001954239.1| geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
           DJO10A]
 gi|322689400|ref|YP_004209134.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           infantis 157F]
 gi|189427593|gb|ACD97741.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
           DJO10A]
 gi|320460736|dbj|BAJ71356.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 360

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +     +T  R  A      AIE     +L+HDD+  +D   +RR
Sbjct: 52  GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108

Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
           G+P+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++  
Sbjct: 109 GRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQR 168

Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + +     GQ+LD+  E                + + KT +    A    A++A     
Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223

Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229
           ++ R      G  LG+ FQLADDLLD
Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249


>gi|255085660|ref|XP_002505261.1| predicted protein [Micromonas sp. RCC299]
 gi|226520530|gb|ACO66519.1| predicted protein [Micromonas sp. RCC299]
          Length = 327

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 14/159 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG   ++++     AI+AG+ LL  A   ++S
Sbjct: 70  RLAEITELIHVASLLHDDV--LDSAATRRGLRALNLEVGNKLAILAGDFLLARASVTLAS 127

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMC 190
                   +R+  ++ L   + L+ ++ G   QM    +  +     F     KT +L+ 
Sbjct: 128 --------LRNTEVIELLSRV-LEHLVTGEVMQMTAKPERLMSFDHYFQKTYFKTASLIA 178

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + ++  ++             +G +LG+ FQ  DD+LD
Sbjct: 179 NSAKAIVLLGGHDTETASHAYDYGRHLGLAFQFQDDVLD 217


>gi|171914615|ref|ZP_02930085.1| polyprenyl synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 589

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            G + R FL          +    L     +   A+EC H  SL+HDD+   DN   R G
Sbjct: 269 AGNRWRPFLTVASYQALREDPEGPLSDDLKKAAIAVECFHKASLVHDDI--EDNDAQRYG 326

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           + T+H ++    A+  G+ L+   + +++   + ++ + R+  ML +    G + +  GQ
Sbjct: 327 EATLHAEHGMPVALNVGDLLIGEGYRLLAD--SNVRADYRTA-MLKIAAE-GQRELCRGQ 382

Query: 164 ----MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
               + +     +  TQV  I + KT      A + GA ++      +E L  + E LGI
Sbjct: 383 GAELLWNNHPVALSSTQVLEIFRSKTAPAFEVALKIGAALSGRLDEVEEALHEYSEALGI 442

Query: 220 IFQL 223
            +Q+
Sbjct: 443 AYQI 446


>gi|68486364|ref|XP_712917.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
 gi|68486429|ref|XP_712885.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
 gi|46434304|gb|EAK93717.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
 gi|46434339|gb|EAK93751.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
          Length = 351

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 24/223 (10%)

Query: 27  TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN---------VNHLTALRVGA 77
            + +M  +  +  + ++ Y   GGK  R   V +  ++ N           +     +G 
Sbjct: 27  VSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVVDTFAILNNTTSDKLNDTEYKKVALLGW 86

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +  Y L+ DD+  MD    RRG+P  ++        I  + +L  A  I+   K  
Sbjct: 87  AIELLQAYFLVADDM--MDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL--KKH 142

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK------MKTGALM 189
            + +     +L L H +  Q  LG Q+LD+   DE I +   F ++K       KT    
Sbjct: 143 FRQDPYYVDLLDLFHEVTFQTELG-QLLDLITADEEIVDLDKFSLEKHSFIVIFKTAYYS 201

Query: 190 CFACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
            +   + A+      +EK+  ++R     LG  FQ+ DD LDC
Sbjct: 202 FYLPVALAMYMSGINDEKDLKQVRDILIPLGEYFQIQDDYLDC 244


>gi|332673082|gb|AEE69899.1| polyprenyl synthetase [Helicobacter pylori 83]
          Length = 307

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  VLNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S            +L+     N  L+   G    +I+D F+      D+ + + I + KT
Sbjct: 117 SK---------MGELIAKALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208


>gi|238882238|gb|EEQ45876.1| farnesyl pyrophosphate synthetase [Candida albicans WO-1]
          Length = 351

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 24/223 (10%)

Query: 27  TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN---------VNHLTALRVGA 77
            + +M  +  +  + ++ Y   GGK  R   V +  ++ N           +     +G 
Sbjct: 27  VSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVVDTFAILNNTTSDKLNDTEYKKVALLGW 86

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +  Y L+ DD+  MD    RRG+P  ++        I  + +L  A  I+   K  
Sbjct: 87  AIELLQAYFLVADDM--MDQSKTRRGQPCWYLVEGVNNIAINDSFMLEGAIYILL--KKH 142

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK------MKTGALM 189
            + +     +L L H +  Q  LG Q+LD+   DE I +   F ++K       KT    
Sbjct: 143 FRQDPYYVDLLDLFHEVTFQTELG-QLLDLITADEEIVDLDKFSLEKHSFIVIFKTAYYS 201

Query: 190 CFACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
            +   + A+      +EK+  ++R     LG  FQ+ DD LDC
Sbjct: 202 FYLPVALAMYMSGINDEKDLKQVRDILIPLGEYFQIQDDYLDC 244


>gi|222636085|gb|EEE66217.1| hypothetical protein OsJ_22362 [Oryza sativa Japonica Group]
          Length = 463

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       +++AG+ LL+ A   +++    L 
Sbjct: 212 EMIHVASLLHDDV--LDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAA----LG 265

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
           +     LM +      ++ ++ G+ + I         + + +QK   KT +L+  +C++ 
Sbjct: 266 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAV 320

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AI+A  + +       +G NLG+ FQL DD+LD
Sbjct: 321 AILAGHTADVSMLAYEYGRNLGLAFQLIDDVLD 353


>gi|242015532|ref|XP_002428407.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus
           corporis]
 gi|212513019|gb|EEB15669.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus
           corporis]
          Length = 403

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 22/207 (10%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMD 96
           ++Y + GGKK R   +     L   N      +L  + +G  IE +    LI DD+  MD
Sbjct: 101 LQYNVPGGKKNRGLALVVTYKLLKKNVSKEEIYLAQI-MGWCIEILQAKLLIADDI--MD 157

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG+P  ++ +D  T   A N  L     +    K   KD      +L L H++ L
Sbjct: 158 NSLTRRGRPCWYLTHDLGTK--ALNDALLLGGSLFQVLKMYFKDKSYYINILELFHDVML 215

Query: 157 QGMLGGQM-----LDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE- 208
           +  LG  +     LDI  +    T  +  +I K KT +   F     A M  A  ++ E 
Sbjct: 216 KTFLGQHLDTHTSLDISKDLNKFTMARYNLICKYKT-SYYSFVLPIAAAMFMAGIDDHEL 274

Query: 209 --RLRCFGENLGIIFQLADDLLDCEED 233
             + +     +G  FQ+ DD LDC  D
Sbjct: 275 HRQAKTILLEMGHFFQVQDDYLDCFGD 301


>gi|119713712|gb|ABL97762.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
           bacterium EB0_41B09]
          Length = 322

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 13/215 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           D  LD + +  A   +   ND+ LSA    +    GK +R+ L      L  ++  T + 
Sbjct: 15  DQFLDKVKIDFAKSFEV--NDQFLSAWLSHHGESQGKWLRARLALATGGLLGISSQTYIN 72

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
                E IH  SL+HDD+   DN  +RRG+ ++  ++    A+  G+ L+  +F  I   
Sbjct: 73  WAVVCELIHSASLLHDDICDQDN--LRRGQTSLWKEFGIPAAVCTGDYLIAESFRKI--- 127

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFA 192
            T++       ++L L  +  ++ ++ GQ  DI     + T  Q   +   KT   +   
Sbjct: 128 -TEIDQGWHQTILLKLL-SYSVKEIIFGQSKDISISPYEMTWDQYTKMATNKTAPFIALP 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                     S+ E E L+   + LG+ +Q  +DL
Sbjct: 186 MMGMFNCNECSKAECEGLQESSDILGLSYQWLNDL 220


>gi|118469870|ref|YP_885527.1| bifunctional short chain isoprenyl diphosphate synthase
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171157|gb|ABK72053.1| bifunctional short chain isoprenyl diphosphate synthase
           [Mycobacterium smegmatis str. MC2 155]
          Length = 329

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK+ R       A L        + V GA IE +H  +L HDD+  MD   +RRG  + 
Sbjct: 49  GGKRFRPLFTVLSAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQMRRGAQSA 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+ L   A  ++S       D +R   +++ T       ++ GQM + 
Sbjct: 107 NARWGNNIAILAGDYLFATASRLVSRLG---PDAVR---VIADT----FAQLVTGQMRET 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +   + +D    ++ +   KT  L+  +   GA  + A+  + ERL   G  +G  FQ+A
Sbjct: 157 RGAADHVDSVDHYLKVVYEKTACLIAASGRFGATFSGANDEQIERLSRLGGIVGTAFQIA 216

Query: 225 DD 226
           DD
Sbjct: 217 DD 218


>gi|317177056|dbj|BAJ54845.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F16]
          Length = 307

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 24/168 (14%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S            +L+     N  L+   G    +I+D F+      D+ + + I + KT
Sbjct: 117 SK---------MGELIAQALSNAVLRLSRG----EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +  + +S AI+      + +    FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL---SKDAKIYADFGLNFGMAFQIIDDLLDITQD 208


>gi|90580459|ref|ZP_01236265.1| Dimethylallyltransferase [Vibrio angustum S14]
 gi|90438368|gb|EAS63553.1| Dimethylallyltransferase [Vibrio angustum S14]
          Length = 298

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 11/196 (5%)

Query: 40  LSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           LS +RY     G + R+ +    A    +N  TA  +   +E +H  SLIHDD+   D  
Sbjct: 39  LSYLRYHQQSDGSQRRAKICYITAVSLGLNTNTAKLLAVTVELLHNASLIHDDVQDKDQK 98

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG+  + ++     AI  G+ L+  A+  +S   T    ++++ +   +   I    
Sbjct: 99  --RRGQDALWVKASVEEAICLGDTLIVAAYHALSKINTPANSHLQATVCRRVMETI---- 152

Query: 159 MLGGQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
              GQM D+  +  + E    +I   K   L+  + E  A++A      K  L     + 
Sbjct: 153 --RGQMDDLSPQLPLTEQSYTLIATNKAAPLLSLSVELPALLAGEPSLAKA-LSNAASSF 209

Query: 218 GIIFQLADDLLDCEED 233
            + +Q  DDL D  +D
Sbjct: 210 ALAYQFYDDLCDQAQD 225


>gi|22296798|gb|AAM94362.1| geranylgeranyl pyrophosphate synthase [Agromyces mediolanus]
          Length = 369

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 47/266 (17%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           PS+  E  + +    DD +++  +H       RL +A R A  GGK+IR  LV       
Sbjct: 10  PSRQAEVERYLGGFFDDAIVRADAHAADYR--RLWAAARDAASGGKRIRPRLVLGAYDAL 67

Query: 66  NVNHLTA----------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                 A                + + AA E +H   L+HDD+  +D   +RRG+P V  
Sbjct: 68  AAQGAPASGRERADAEPAAAAEAVALAAAFELLHTAFLVHDDV--IDRDLVRRGEPNVAG 125

Query: 110 Q-----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           +                 Y + +AI+AG+ LL  A   +++  T  + +       SLT 
Sbjct: 126 RFALDAALRGLERERADAYGQASAILAGD-LLIAAAHSVAAAST-CRSSAGEPSSPSLTK 183

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC--ESGAIMAHASQNEK 207
            +       G+  D++        E  +  + + KT A   F+    +GA++A A +   
Sbjct: 184 CV--FAAAAGEHADVRHAAGVRPGEADILAMIEDKT-ACYSFSAPLRAGALLAGAPRATV 240

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           ERL   G  LG+ FQL DD+L    D
Sbjct: 241 ERLGEIGRRLGVAFQLQDDVLGVYGD 266


>gi|302557478|ref|ZP_07309820.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
 gi|302475096|gb|EFL38189.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
          Length = 360

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 80/208 (38%), Gaps = 29/208 (13%)

Query: 45  YALLGGKKIRSFL-----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           Y L GGK++R        +       +      LR  A  E +H   LIHDD+  +D   
Sbjct: 45  YVLRGGKRVRPTFAWLGWIGAGGDPDDPVAPAVLRACAGFELLHASGLIHDDI--IDASR 102

Query: 100 IRRGKPTVHIQYDE----------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRS--QLM 147
            RRG P  H+ + E            A  AG  +L     ++ S        + +  Q  
Sbjct: 103 TRRGHPAAHVVFAERHRMRRFSGDPGAFGAGAAILVGDLALVWSDVMVRASGLPADAQTR 162

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQ 204
           L    +     ++ GQ+LD+  +  DE  V    ++ + KT     +  E       A  
Sbjct: 163 LGPVWSAVRYEVMYGQLLDLISQASDEEGVDAALLVDQYKTA---SYTVERPLQFGAAIA 219

Query: 205 NEKERL----RCFGENLGIIFQLADDLL 228
                L    R FG ++GI FQL DDLL
Sbjct: 220 GADAGLVDAYRAFGADIGIAFQLRDDLL 247


>gi|302538600|ref|ZP_07290942.1| predicted protein [Streptomyces sp. C]
 gi|302447495|gb|EFL19311.1| predicted protein [Streptomyces sp. C]
          Length = 355

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 15/205 (7%)

Query: 38  RLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSM 95
           R L  +R  +L GGK++R  L+ E A+L   + L  L   A +IE +  + LIHDD+  +
Sbjct: 41  RALDLVRDMSLRGGKRLRVVLLYEAAALVADDGLAGLDEAAISIELLQTHGLIHDDI--I 98

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS------QLMLS 149
           D+  +RRG P+ +  Y           L         +    L+  + S       L ++
Sbjct: 99  DDAPVRRGGPSTYYAYRHEFPDQPDTALALALLAGDLAAFLSLRVLLTSGLPADRALAMA 158

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNE 206
             H       + GQM+D++ +F     +     + + K+      A     ++A  + + 
Sbjct: 159 AVHADTGAATMTGQMIDLERDFHPAPGIDFLHAVTEFKSTRYSVLAPLRMGLLAAGADHT 218

Query: 207 K--ERLRCFGENLGIIFQLADDLLD 229
                LR +   LGI  Q+ DD LD
Sbjct: 219 PYDAELRRYATALGIANQIHDDWLD 243


>gi|119478047|ref|ZP_01618126.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [marine gamma
           proteobacterium HTCC2143]
 gi|119448753|gb|EAW29996.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [marine gamma
           proteobacterium HTCC2143]
          Length = 208

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           LM  +T+ I    +L  Q+    D    E Q F +   KT  L   A   GAI+A   Q 
Sbjct: 20  LMADVTNTIAEGEVL--QLTKAGDPDTTEDQYFQVITNKTAVLFAAATAGGAILAQQDQT 77

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
             +    +G NLGI FQL DD+LD E
Sbjct: 78  TVDNYYQYGLNLGIAFQLIDDVLDYE 103


>gi|289759542|ref|ZP_06518920.1| predicted protein [Mycobacterium tuberculosis T85]
 gi|289715106|gb|EFD79118.1| predicted protein [Mycobacterium tuberculosis T85]
          Length = 230

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 24/206 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 41  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+  
Sbjct: 97  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 152

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 153 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 204

Query: 186 GALMCFACESGAIMAHASQNEKERLR 211
            AL    C  GA++A+A     E  R
Sbjct: 205 AALTGCCCALGALVANADDATIEPPR 230


>gi|169846410|ref|XP_001829920.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130]
 gi|116508947|gb|EAU91842.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130]
          Length = 325

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 17/189 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  L+       NV       +   +  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 37  GKEIRGKLIDAFNLWLNVPDDKLQVIAKIVNMLHAASLMVDDI--EDDSQLRRGNPVAHK 94

Query: 110 QYDEVTAIIAGNGLLTYAFEII------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            Y     I + N +   AF+ +       +P  Q  D + +Q +LSL    GL+ +    
Sbjct: 95  IYGIPQTINSANYVYFLAFQELFALRNGPTPPRQDIDQMVTQELLSLHRGQGLEILWRDS 154

Query: 164 M-LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +    ++++ID     M+   KTG L+    +   +MA ++ N            G+ FQ
Sbjct: 155 LQCPTEEQYID-----MVSN-KTGGLLRLGIK--LMMACSTTNSDVDYTPLVSLFGVYFQ 206

Query: 223 LADDLLDCE 231
           + DDL++ +
Sbjct: 207 IRDDLMNLQ 215


>gi|255513478|gb|EET89744.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 340

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 16/194 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G   R  L+     +F       +++ AA +    + LI DD  +MD+   RRG PT+H 
Sbjct: 42  GNYRRPILLMLTGEMFGAPIEKLVQLAAAQQLSEEWLLIQDD--AMDDSEFRRGGPTLHK 99

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y  + AI A + +    ++I+     +  D      +    +++ ++  + GQ   I++
Sbjct: 100 MYGWIHAINASDTINVTMWKILKDYIMKF-DPKNGNAIYDKFYDM-IKYTIEGQY--IEN 155

Query: 170 EFIDETQ---------VFMIQKMKTGALMCFA-CESGAIMAHASQNEKERLRCFGENLGI 219
           +FI+ T+          F I   KT     +   + GA+ A A +      +  G N GI
Sbjct: 156 KFINNTKDLSKASESMYFRIADGKTCYYTIYGPMQIGAMAAGAPEKAISAFKEIGTNTGI 215

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD+LD   D
Sbjct: 216 AFQIMDDILDMAGD 229


>gi|41408009|ref|NP_960845.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396364|gb|AAS04228.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 348

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 43/174 (24%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTY 126
           H  +L+HDD+  +D+   RRG+PT H+++  +                 AI+ G+  L +
Sbjct: 77  HACALVHDDV--IDDSATRRGRPTTHVRFASLHRDRQWQGSPERFGMSAAILLGDLALAW 134

Query: 127 AFEIIS----SPKT-----QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           A +I+     +P+      ++  NIR++             +LGGQ LDI  E      +
Sbjct: 135 ADDIVLGVDLTPQAARRVRRVWANIRTE-------------VLGGQYLDIVAEASAAASI 181

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKER---LRCFGENLGIIFQLADDLL 228
                + T    C+       +  A+ +  +       FG +LG+ FQL DD+L
Sbjct: 182 ASAMNVDTFKTACYTVSRPLQLGAAAADRPDVHDLFSQFGTDLGVAFQLRDDVL 235


>gi|115469526|ref|NP_001058362.1| Os06g0678200 [Oryza sativa Japonica Group]
 gi|52076633|dbj|BAD45534.1| putative geranyl diphosphate synthase [Oryza sativa Japonica Group]
 gi|52076919|dbj|BAD45931.1| putative geranyl diphosphat synthase [Oryza sativa Japonica Group]
 gi|113596402|dbj|BAF20276.1| Os06g0678200 [Oryza sativa Japonica Group]
 gi|125556476|gb|EAZ02082.1| hypothetical protein OsI_24162 [Oryza sativa Indica Group]
 gi|215765303|dbj|BAG87000.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 430

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       +++AG+ LL+ A   +++    L 
Sbjct: 179 EMIHVASLLHDDV--LDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVALAA----LG 232

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKM--KTGALMCFACESG 196
           +     LM +      ++ ++ G+ + I         + + +QK   KT +L+  +C++ 
Sbjct: 233 NTEVVSLMAT-----AVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAV 287

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AI+A  + +       +G NLG+ FQL DD+LD
Sbjct: 288 AILAGHTADVSMLAYEYGRNLGLAFQLIDDVLD 320


>gi|291516753|emb|CBK70369.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
           subsp. longum F8]
          Length = 360

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 33/206 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGA------AIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +   +     +T  R  A      AIE     +L+HDD+  +D   +RR
Sbjct: 52  GGKRLRALLALDAFDIL-AGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRR 108

Query: 103 GKPTVHIQYDEVT---AIIAGNGLL------TYAFEIISSPKTQLKD-NIRSQLMLSLTH 152
           G+P+ H   ++     AI  G GL+      T   EI     ++L + +  ++  L++  
Sbjct: 109 GRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITCRSASRLPNTDALNEAFLTMQR 168

Query: 153 NIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + +     GQ+LD+  E                + + KT +    A    A++A     
Sbjct: 169 EVEI-----GQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESP 223

Query: 206 EKER--LRCFGENLGIIFQLADDLLD 229
           ++ R      G  LG+ FQLADDLLD
Sbjct: 224 DQARHCALAVGRPLGLAFQLADDLLD 249


>gi|215447707|ref|ZP_03434459.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T85]
 gi|294995846|ref|ZP_06801537.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 210]
          Length = 193

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 24/206 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 4   RAIESMREPLATMAGYHLGWWNADRSTAAGS----SGKYFRAALVYAAAAACGGDVGDAT 59

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+  
Sbjct: 60  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 115

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 116 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 167

Query: 186 GALMCFACESGAIMAHASQNEKERLR 211
            AL    C  GA++A+A     E  R
Sbjct: 168 AALTGCCCALGALVANADDATIEPPR 193


>gi|183983209|ref|YP_001851500.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M]
 gi|183176535|gb|ACC41645.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M]
          Length = 345

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 10/152 (6%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H +SL+HDD+  MD    RRG+ TV   + E  AI+ G+ L   A  ++      L+
Sbjct: 94  ELMHNFSLVHDDV--MDRDATRRGRATVWAVWGETNAIVLGDALHALAGRVLVE---MLE 148

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFACESG 196
             + +  ++ L  +     +  GQ  D   E  +   V    +M   KT  LM  AC  G
Sbjct: 149 PEVAANAVMRLESSC--VTLCDGQFEDCDFETRESVSVDGYLEMAAGKTAGLMGCACALG 206

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           A+ A+A       +  FG  LG+ FQ+ DD++
Sbjct: 207 ALAANADPATVTAMHQFGFQLGLAFQIVDDVM 238


>gi|256377875|ref|YP_003101535.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255922178|gb|ACU37689.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 361

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%)

Query: 50  GKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK++R      C  L      T       +R   A+E +   +L+HDD+  MD    RRG
Sbjct: 52  GKRVRPIFAW-CGWLAAGGAETGPESDAVVRALVALELLQVCALVHDDV--MDRSTTRRG 108

Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +   H+                 Y +  A++ G+  L ++ + I +   +     R+ + 
Sbjct: 109 RAAAHVAFAARHRRLRWSGDPKHYGDCAAVLVGDLALAWSDDAIVTAGLEPAALSRAWVA 168

Query: 148 LSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACES----GAI 198
                      M+ GQ LD+     ++E ++  Q   +  +KT A   +  E     GA 
Sbjct: 169 WQAMR----VEMMAGQHLDLLAGARREESLE--QALRVAALKTAA---YTVERPLHLGAA 219

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228
           MA A     E LR FG ++G+ FQL DDLL
Sbjct: 220 MAGAGPELVEALRSFGRDIGVAFQLRDDLL 249


>gi|226372050|gb|ACO51650.1| Geranylgeranyl pyrophosphate synthetase [Rana catesbeiana]
          Length = 299

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 20/193 (10%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK+IR+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKTQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +       N+ +Q +L L       
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLNHPDAVNVFTQQLLELHR----- 124

Query: 158 GMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
               GQ LDI  +D +    ET+   +   KTG L   A     +M   S ++K+ L+  
Sbjct: 125 ----GQGLDIYWRDTYTCPTETEYKSMVLQKTGGLFGLAV---GLMQLFSSSKKD-LKPL 176

Query: 214 GENLGIIFQLADD 226
              LG+ FQ+ DD
Sbjct: 177 LNTLGLFFQIRDD 189


>gi|15805956|ref|NP_294656.1| polyprenyl synthase [Deinococcus radiodurans R1]
 gi|6458656|gb|AAF10509.1|AE001946_1 polyprenyl synthase [Deinococcus radiodurans R1]
          Length = 320

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 28/196 (14%)

Query: 49  GGKKIRSFLVTECASLFNV---------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           GGK++R  +    A              +    LR+   +E +H  SL+HDDL  +D+  
Sbjct: 32  GGKRVRPLVTLLAAQALGAGPDALATSHSWDELLRLSVCVELLHSASLLHDDL--IDDSD 89

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            RRG+ T   ++  V ++++G+ +L     E+   P +            +LT   G   
Sbjct: 90  KRRGQETAFRRFGNVVSVMSGDFMLARLLGELSGMPGSP-----------ALTRAFGQAA 138

Query: 159 ML--GGQMLDIQ-DEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +   G++L  Q   + D +    F +   KT AL+  A ++ A++  A  + ++ L  F
Sbjct: 139 SVICEGEVLQFQVASYADYSFENYFQVIHGKTAALLELAAQAPAMLLGADDSARDALSTF 198

Query: 214 GENLGIIFQLADDLLD 229
           G   G+ FQ+ DDLLD
Sbjct: 199 GREYGMAFQMQDDLLD 214


>gi|240171554|ref|ZP_04750213.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium kansasii
           ATCC 12478]
          Length = 370

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 26/166 (15%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTY 126
           H ++L+ DD+  MD    RRG P VH+Q                + E  AI+ G+  L +
Sbjct: 100 HAFALLQDDV--MDRSSQRRGSPAVHVQLAEWYRLRGLSGPAGRFGESAAILLGDVCLIW 157

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKM 183
           A +++     + +   R Q +      + ++ +  GQ  D+ ++  D      V  I + 
Sbjct: 158 AEQMLRESGVEAR---RLQQLWPRYDAMRIE-LAVGQFADLANDIRDRPSLRTVLDIARR 213

Query: 184 KTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           K+G        E GA MA        +L  +G ++G  FQL DDLL
Sbjct: 214 KSGNYTVRRPLEMGAAMADCDDRTLTQLGLYGADVGEAFQLRDDLL 259


>gi|297197031|ref|ZP_06914428.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
 gi|197715682|gb|EDY59716.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
          Length = 351

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 33/205 (16%)

Query: 46  ALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           A+  GK++R+   +     A   + + L  +R  A++E +H  +++HDDL  +D+  +R 
Sbjct: 47  AVADGKRLRAAFCYWGWRAAGQPDSDAL--VRAAASMELVHAAAVVHDDL--IDDSPLRH 102

Query: 103 GKPTVHIQYDEVT-------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           G+PT H+                   A++ G+ L++ A ++ ++         R++ + S
Sbjct: 103 GRPTAHVALRGAVHGRPRAVSAARSLAMLVGDLLMSLAGQMFATSGLPAAYLARARPLWS 162

Query: 150 LTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHAS 203
           +      + ++ G+ L+I       D      + + KT     +  E     G  +A A 
Sbjct: 163 VL----ARELIAGECLEILRTGTVPDTATSLKVIRYKTAK---YTVEQPLLIGGTLAGAG 215

Query: 204 QNEKERLRCFGENLGIIFQLADDLL 228
           +  +E    +G  LG  FQL DDLL
Sbjct: 216 ERLREGYSAYGLPLGEAFQLRDDLL 240


>gi|329946884|ref|ZP_08294296.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328526695|gb|EGF53708.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 386

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 107/275 (38%), Gaps = 58/275 (21%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFL-VTEC 61
           LP+ L      ++  L+++L       +   Q    LL A    L GGK++R+ L    C
Sbjct: 4   LPAALSRVRPAVEHRLEEVLAGCHRRWEELEQAAPELLKAADSVLGGGKRMRAVLGAVGC 63

Query: 62  ASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH--IQYD 112
             L    H        +A+ +GAA+E     +L+HDDL  MD    RRG P  H    ++
Sbjct: 64  TILSAPEHRNKELTGASAVHLGAALELYQASALVHDDL--MDGASTRRGLPAAHHAFAWE 121

Query: 113 EVTAIIAG-------NGLLTYAFEIISSPKTQLKDNIRSQLML---------------SL 150
             T    G       NG +     ++S    ++    ++                   ++
Sbjct: 122 HETRGWLGHSRAFGSNGAILLGDLLLSLAGEEMSALAQAHTSSGCGDEAVGHARAAFDAM 181

Query: 151 THNIGLQGMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACES----------- 195
           T  + L     GQ LD++ E +     +      Q+M+  AL     +S           
Sbjct: 182 TTEVAL-----GQYLDVRSENLPLPWGQDPAAAAQRMRDDALSVVRHKSARYSVRHPLLI 236

Query: 196 GAIMA--HASQNEKERLRCFGENLGIIFQLADDLL 228
           GA++A    S    + L  FGE +GI FQL DD L
Sbjct: 237 GALLAGMAPSSPTAKHLAEFGEEIGIAFQLRDDEL 271


>gi|229817447|ref|ZP_04447729.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM
           20098]
 gi|229785236|gb|EEP21350.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM
           20098]
          Length = 359

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 29/203 (14%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R+ L+      F+ +  T    L V  A+E     +L+HDD+  +D+  +RRGKP
Sbjct: 52  GGKRLRALLMLAAYDAFDGHADTRNAMLDVACALEVFQTAALVHDDI--IDDSDLRRGKP 109

Query: 106 TVH--IQYDEVTAIIAGNGLL-------TYAFEIISSPKTQLKDNIR-SQLMLSLTHNIG 155
           + H  ++ D  +  I     L       T   +I++     L      +   L++   + 
Sbjct: 110 SAHRALETDTGSPAIGRGLGLMLGDLLATVCIDIVNEAAALLPHATALTSAFLNMQREVE 169

Query: 156 LQGMLGGQMLDI-------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNE 206
           +     GQ+LD+       QD          + + KT +    A    A++    A    
Sbjct: 170 I-----GQILDLAVEQAPLQDAEALANASLNVFRWKTASYTTIAPIELALLGSGAAPGQA 224

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
           +ER    G+ LG+ FQL DDL+D
Sbjct: 225 RERALAIGKPLGLAFQLEDDLID 247


>gi|62752853|ref|NP_001015867.1| farnesyl diphosphate synthase [Xenopus (Silurana) tropicalis]
 gi|59861885|gb|AAH90384.1| MGC108224 protein [Xenopus (Silurana) tropicalis]
 gi|124504226|gb|AAI28626.1| MGC108224 protein [Xenopus (Silurana) tropicalis]
          Length = 348

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 98/254 (38%), Gaps = 29/254 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
           MN    S+ QE S   + I+ DL  + + H +      RL   + Y   GGK  R   VT
Sbjct: 1   MNSHAGSERQEFSSYFEQIVQDLTAEDSGHPEVGDAITRLKEVLEYNTPGGKCNRG--VT 58

Query: 60  ECASLFNV---------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
             AS   +         N   AL VG  +E +  + L+ DD+  MDN   RRG+P  + +
Sbjct: 59  VLASYKELVGPELHKDGNLQRALAVGWCVELLQAFFLVADDI--MDNSVTRRGQPCWYRK 116

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--- 167
             E   + A N        I    +   +       +L L      Q  LG Q LD+   
Sbjct: 117 --EGVGLDAVNDSFLLEASIYRILRKYCRGKPYYLSLLELFLETSYQTELG-QALDLITA 173

Query: 168 QDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHAS---QNEKERLRCFGENLGI 219
           Q   +D     E +   I K KT A   F     A M  A    + E    R     +G 
Sbjct: 174 QPGKVDLNRYTEKRYKAIVKYKT-AFYSFYLPVAAAMYMAGIAGEAEHTNARTILLEMGE 232

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD LDC  D
Sbjct: 233 FFQIQDDYLDCYGD 246


>gi|304321515|ref|YP_003855158.1| polyprenyl synthetase family protein [Parvularcula bermudensis
           HTCC2503]
 gi|303300417|gb|ADM10016.1| polyprenyl synthetase family protein [Parvularcula bermudensis
           HTCC2503]
          Length = 317

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 8/181 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A L          +  A+E IH  +L+HDD+  +D   +RRG  T +
Sbjct: 35  GGKRLRPLMTLAAAELCGETGEGPRLLAGAVELIHAATLLHDDV--VDESALRRGLRTAN 92

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L   AFE++         +I    +LS    I  +G +  Q+   Q
Sbjct: 93  IVFGNKESVLVGDFLFARAFELMVR-----TGSIEVLGILSKASCIIAEGEVL-QLTTSQ 146

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    +T    +   KT AL   A E+GA++A     +   +R +G N GI +QL DD L
Sbjct: 147 NLETPQTIYLDVISAKTAALFAAAAEAGAVVAGGDAEKVAAMRAYGLNFGIAYQLVDDAL 206

Query: 229 D 229
           D
Sbjct: 207 D 207


>gi|307103628|gb|EFN51886.1| hypothetical protein CHLNCDRAFT_49140 [Chlorella variabilis]
          Length = 312

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 49  GGKKIRSFLVTECA-SLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R  +V   A + F +  L+ +     R+    E +H  SL+HDD+  +D   +RR
Sbjct: 41  GGKRLRPLIVLLVARATFPLTGLSDITERHRRLAEISEMLHTASLVHDDV--LDECDVRR 98

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  Y    A++AG+ L   +   +++      DN+    ++S        G +  
Sbjct: 99  GKETVNSLYGTRVAVLAGDFLFAQSSWFLAN-----LDNMEVIKLISQVIADFADGEI-S 152

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           Q   + D +ID  +       KT +L+  +C S A+ +
Sbjct: 153 QAASLFDAYIDLRRYLDKSFWKTASLIAASCRSAAVFS 190


>gi|227538590|ref|ZP_03968639.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241509|gb|EEI91524.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 201

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 14/167 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R   V   A L    + +  R  + +E +H  SL+HDD+  +DN   RRG  +V+ 
Sbjct: 45  GKQMRPMFVFFSAGLCGSINESTFRGASLVELLHTASLVHDDV--VDNANERRGFFSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+    ++S       DN    L+  ++    ++ M  G++L I+ 
Sbjct: 103 LWKNKVAVLVGDFLLSKGL-LLSV------DNNDFHLLKIVSE--AVEQMSEGELLQIEK 153

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
                I+E+  F + + KT +L+   C  GA          ++  CF
Sbjct: 154 ARKLDIEESVYFEVIRQKTASLIASCCACGAASTDVDARNCKKNACF 200


>gi|50955185|ref|YP_062473.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50951667|gb|AAT89368.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 371

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 31/216 (14%)

Query: 38  RLLSAIRYALLGGKKIRS-FLVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPS 94
           RL  + R A  GGK++R  FL++    L   +     A+R   A E +H   L+HDDL  
Sbjct: 54  RLWESARDAAEGGKRLRPRFLLSAFHGLGAPDDRREDAIRTAVAFELLHTAFLLHDDL-- 111

Query: 95  MDNGYIRRGKPTVHIQY---------DEVTAIIAGNGLLTYAFEIISS------PKTQLK 139
           +D   +RRG+P V  ++         D   A + G      A +++         +    
Sbjct: 112 IDGDTVRRGRPNVAGEFSADALFRGADAPLATVWGESAALLAGDLLLHAASDQLARLDAP 171

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEFIDETQVFMIQKMKTGAL-MCFA 192
             +RS+L+ +L   + +     G++ D+          I +  V  + + KT A  +   
Sbjct: 172 AGVRSRLLDALDRAVFVTAA--GELADVGLATGMTARGIPD--VLAMTEHKTAAYSVSGP 227

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             +GA++A AS    + L  +G  +G  FQL DDLL
Sbjct: 228 LTAGALLAGASDGLLDVLAHYGRLVGAAFQLGDDLL 263


>gi|156554759|ref|XP_001605679.1| PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis]
          Length = 314

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 16/196 (8%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + +++LL    Y L + GK+IR  L         +       VG   + +H  SL+ DD+
Sbjct: 17  EQDEKLLQPFTYILQVPGKQIRGKLAHAFNYWLKIPVEKLQAVGDITQMLHNSSLLIDDI 76

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   + I A N +L  A E + S        + ++ +L L  
Sbjct: 77  --QDNSILRRGIPVAHSIYGVASTINAANYVLFIALERVISLNHPEATQVYTEQLLELHR 134

Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G++       +  +D FI   E +   +   KTG L   A     + +      KE  
Sbjct: 135 GQGME-------IYWRDNFICPSEAEYRTMTIRKTGGLFNLAVRLMQLFSDC----KEDF 183

Query: 211 RCFGENLGIIFQLADD 226
                 LG+ FQ+ DD
Sbjct: 184 TPLAGILGLYFQIRDD 199


>gi|261337603|ref|ZP_05965487.1| probably short chain isoprenyl diphosphate synthase
           [Bifidobacterium gallicum DSM 20093]
 gi|270278026|gb|EFA23880.1| probably short chain isoprenyl diphosphate synthase
           [Bifidobacterium gallicum DSM 20093]
          Length = 385

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 44/218 (20%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA----------------LRVGAAIECIHCYSLIHDDL 92
           GGK++R+ L+ E   +      T                 L +  AIE     +L+HDD+
Sbjct: 66  GGKRLRALLLLETYRVMEPTQPTPASDQTPTNQARIKQSVLDLACAIELFQTAALVHDDI 125

Query: 93  PSMDNGYIRRGKPTVHIQYDEV---------TAIIAGNGLLTYAFEIISSPKTQLKD-NI 142
             +D+  +RRGKP  H                 I+ G+ L T    + S     L D N 
Sbjct: 126 --IDDADLRRGKPAAHRALANAGGTLSTGIGLGIMLGDLLATACSVVASEASHALPDPNA 183

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM-----IQKMKTGALMCFACES 195
             +  + +   + +     GQ+LD+  E   +D+ Q        + + KT +        
Sbjct: 184 IERAFMRMQQEVEI-----GQVLDLAIERMSLDDAQALADASLNVFRWKTASYTTITPLL 238

Query: 196 GAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDC 230
            A++A A   E E LR     G  LGI FQ+ADDL+D 
Sbjct: 239 LAMLA-AGMPEDEALRHAIDIGLPLGIAFQIADDLIDV 275


>gi|25452945|sp|O24241|FPPS1_PARAR RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase
           1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 1; AltName:
           Full=Dimethylallyltranstransferase 1; AltName:
           Full=Farnesyl diphosphate synthase 1; AltName:
           Full=Geranyltranstransferase 1
 gi|1532050|emb|CAA57892.1| farnesyl diphosphate synthase [Parthenium argentatum]
          Length = 342

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 28/233 (12%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
           DT+  +L+   A          +   + Y + GGK  R   V +   L     LT     
Sbjct: 14  DTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVIDSYQLLKGGELTDNEIF 73

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G++      
Sbjct: 74  LAAALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAANDGIILRN--- 127

Query: 131 ISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------- 179
            + P+  LK + R +     +L L + +  Q    GQM+D+    + E  +         
Sbjct: 128 -NVPRI-LKKHFRGKPYYVDLLDLFNEVEFQ-TASGQMIDLITTLVGEKDLSKYSLSIHR 184

Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230
            I + KT     +   + A++      EK E ++     +G  FQ+ DD LDC
Sbjct: 185 RIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMGTYFQVQDDYLDC 237


>gi|242078453|ref|XP_002443995.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor]
 gi|241940345|gb|EES13490.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor]
          Length = 365

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 15/166 (9%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +RV    E IH  SLIHDD+  +DN   RRG  +++    +  A++AG+ LL  AF    
Sbjct: 137 MRVAEITEMIHISSLIHDDV--LDNADTRRGMDSLNFTVGKKLAVLAGDFLLFRAF---- 190

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMC 190
           S    L +     L+ +  +N+    ++   +   Q   +D    + +QK   KT AL+ 
Sbjct: 191 SAAVALDNTEVVSLLATAVNNLVTGELMQLTITPAQRCSMD----YYLQKTYYKTAALIS 246

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +C++ A+++  +   +     +G +LGI+      +L   E+ P+
Sbjct: 247 NSCKAIAVLSGQTTEVQALAYQYGRHLGIV---TAPVLFAMEEFPQ 289


>gi|226356385|ref|YP_002786125.1| polyprenyl synthetase [Deinococcus deserti VCD115]
          Length = 341

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 82/201 (40%), Gaps = 34/201 (16%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           Y   GGK IRS L+   A    V H T     A  + A +E    + LIHDD+   D+  
Sbjct: 44  YPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDI--QDDSE 101

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRG+P +H  Y    AI  G+ L  Y +  +   +  +   +     L++ H       
Sbjct: 102 ERRGQPALHRLYGVPLAINVGDALHAYMWAAVH--RAGVPGAMEE--FLTMIHRTA---- 153

Query: 160 LGGQMLDI-----QDEFIDETQVFMIQKMKTG------ALMCFACESGAIMAHASQNEKE 208
             GQ LD+     ++  + E     + ++KT        L   A  +G   A A  N   
Sbjct: 154 -EGQHLDLSWVEHREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPASAFTNA-- 210

Query: 209 RLRCFGENLGIIFQLADDLLD 229
                G  LG  FQ+ DD+L+
Sbjct: 211 -----GLALGSAFQIRDDVLN 226


>gi|297243593|ref|ZP_06927524.1| bifunctional short chain isoprenyl diphosphate synthase
           [Gardnerella vaginalis AMD]
 gi|296888344|gb|EFH27085.1| bifunctional short chain isoprenyl diphosphate synthase
           [Gardnerella vaginalis AMD]
          Length = 368

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 43/250 (17%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTEC-------A 62
           S++ +T L+D L  T +    Q        I+ A++   GGK +R+ L            
Sbjct: 23  SQQFNTGLEDNLSSTCAQTLQQ-------VIKQAIVSSEGGKLLRALLTISAFYAASKET 75

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE------VTA 116
           ++  ++  +   +  A+E     +LIHDD+  +D  Y+RRGKP+ +    +      +  
Sbjct: 76  NIQKIHEQSVFDIACALEVFQTAALIHDDI--IDESYLRRGKPSAYCALSKACNNKHIGT 133

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLML----SLTHNIGLQGMLGGQMLDIQDEFI 172
            +        A E     +   K+    + +L    S+  N+G+     GQ+LD+  E +
Sbjct: 134 GLGLMLGDLLATESFDIARNCAKNFTYGEELLAAFASMQRNVGI-----GQVLDLSIEMM 188

Query: 173 D-------ETQVFMIQKMKTGALMCFACES-GAIMAHASQNEKERL-RCFGENLGIIFQL 223
                         + + KT +    A  + G + A+    E   L    G +LG+ FQ+
Sbjct: 189 QLDNPIQLAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQI 248

Query: 224 ADDLLDCEED 233
           ADDLLD   D
Sbjct: 249 ADDLLDIVSD 258


>gi|146413673|ref|XP_001482807.1| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 329

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           NH T   +   I   H  SL+ DD+   D    RRG P  H +Y     +  GN +   A
Sbjct: 53  NHDTIATISEVITVFHNSSLLIDDIE--DGSEFRRGLPAAHTKYGVALTLNCGNLMYFVA 110

Query: 128 FEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQ-DEFIDETQVFMIQ 181
            +      P+    DN ++ + LS+  NI ++ +L    GQ LDI   + +  T++ +I+
Sbjct: 111 LQTAQQKLPQYHPSDN-KNDIALSIL-NILVEELLNLHHGQGLDIHWRDHLKTTKLPLIE 168

Query: 182 KM------KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +       KTG L   A +   + A ++  ++  +       GI+FQ+ DDL++  +D
Sbjct: 169 EYMEMIMNKTGGLFRLAVK--LLGAFSTPQDEPTVLAIANLFGIVFQIRDDLMNLVDD 224


>gi|163795411|ref|ZP_02189378.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
 gi|159179397|gb|EDP63928.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
          Length = 294

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GG ++R+ +  +  S   ++    + + +  E +H  SL+HDDL   D   +RR  P++ 
Sbjct: 50  GGSRVRARIALQAGSALGLSQTICVALASGCELLHNASLVHDDLQDRDG--MRRNAPSMW 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           + + E  AI AG+ +L+ A+  ++    +    I + + L + H I  Q
Sbjct: 108 LAHGEAIAICAGDLMLSSAYAALAQAGPKAASMI-THVHLRVAHVISGQ 155


>gi|145222438|ref|YP_001133116.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315442885|ref|YP_004075764.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
 gi|145214924|gb|ABP44328.1| Polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315261188|gb|ADT97929.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
          Length = 371

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 44/186 (23%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVT 115
           A+R  A++E +H ++L+ DD+  MD   +RRG+PT H                 ++ E  
Sbjct: 90  AIRAAASLEFLHAFALMQDDV--MDESPMRRGRPTAHRAFANWHHANGLSGSSTRFGESA 147

Query: 116 AIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           A++  +  L +A +++                 D +R++L +             GQ  D
Sbjct: 148 AVLLADLCLVWAEQMLRESGVDAAALDRAWPRYDTMRTELAV-------------GQFAD 194

Query: 167 IQDE---FIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           + ++   F     V  + + K+G        E GA +A   + +   L  +G  +G  FQ
Sbjct: 195 LVNDTATFPSLDAVLDVARRKSGNYTVRRPLEIGATLAGCDERQLSALAGYGSAVGEAFQ 254

Query: 223 LADDLL 228
           + DDLL
Sbjct: 255 MRDDLL 260


>gi|15611295|ref|NP_222946.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori J99]
 gi|4154736|gb|AAD05797.1| putative OCTAPRENYL-DIPHOSPHATE SYNTHASE [Helicobacter pylori J99]
          Length = 307

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  ALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG + G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLHFGMAFQIIDDLLDITQD 208


>gi|42523219|ref|NP_968599.1| putative octaprenyl-diphosphate synthase [Bdellovibrio
           bacteriovorus HD100]
 gi|39575424|emb|CAE79592.1| putative octaprenyl-diphosphate synthase [Bdellovibrio
           bacteriovorus HD100]
          Length = 329

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 13/155 (8%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SLI DD+   D+   RRG PT H  Y    A+  GN +    FE +       
Sbjct: 73  LEWIHAGSLIVDDI--QDDSLERRGGPTAHRLYGVGPALNLGNWMY---FEALKGLHALP 127

Query: 139 KDNIRSQLMLSLTH------NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
            D+     ++S  H      ++G    LG  M  +  E I E  V     +K+GAL+  A
Sbjct: 128 VDDSVKLKIISCAHEAMHQAHLGQALDLGANMKTLSAEQIQEV-VHKSHSLKSGALVALA 186

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            + GA++  A Q + + L+  G  LG   Q  DDL
Sbjct: 187 MQVGALIGDA-QADLQLLQELGMQLGSSLQRFDDL 220


>gi|162538563|gb|ABY19313.1| farnesyl diphosphate synthase 2 [Myzus persicae]
 gi|168831500|gb|ACA35007.1| putative mitochondrial isoprenyl diphosphate synthase precursor
           [Myzus persicae]
 gi|169139042|gb|ACA48700.1| farnesyl diphosphate synthase 2 [Myzus persicae]
          Length = 396

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 25/207 (12%)

Query: 43  IRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSM 95
           ++Y + GGK  R   LV+    L + ++LT      +  +G  +E +  Y L+ DDL  M
Sbjct: 91  LQYNVPGGKNNRGLILVSSFKMLSSPSYLTDENLRLSYILGWCVEILQAYQLVMDDL--M 148

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRG+P  + ++++V  +   +G+L     I    K   KD      +L L +++ 
Sbjct: 149 DNAITRRGRPCWY-RHNDVGLMAVNDGILLEQ-AIYQLLKKYFKDKPYYTHILELFYDVT 206

Query: 156 LQGMLGGQMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           ++  +G Q LD+         + E         I K KT A   F       M   + N+
Sbjct: 207 MKSAMG-QCLDMLTAKSFKSKKLEKYTMENYKAIVKYKT-AYYSFVLPVCLAMRMTNVND 264

Query: 207 KERLR---CFGENLGIIFQLADDLLDC 230
           +E  R       ++G  FQ+ DD LDC
Sbjct: 265 QEIFRQAKVILLDMGQFFQIQDDYLDC 291


>gi|317506405|ref|ZP_07964210.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255285|gb|EFV14550.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 221

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 14/160 (8%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           D  ++ IRY   GGK +R+ L T            A+     +E +H  SL+HDD+  +D
Sbjct: 61  DAGVAPIRY---GGKAVRAALATLSCEALGGAAALAVDAAVCVELLHNASLLHDDI--ID 115

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG+P     +    A++AG+ L   A    ++ ++    +   +++ S T     
Sbjct: 116 GDRQRRGRPAAWTVFGVPAAMLAGDALFFLAMGRAAAMQSGTACDSVGKVIDSFTE---- 171

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKM---KTGALMCFAC 193
             ++ G+ LDI  E      V  ++ M   KTGAL+  AC
Sbjct: 172 --VIEGEYLDILLEGRSGATVSEVEAMAASKTGALIALAC 209


>gi|317010521|gb|ADU84268.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           SouthAfrica7]
          Length = 307

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S     +   I S  +L L+    ++ M  G+  +      D+ + + I + KT   +  
Sbjct: 117 SKMGESIA-QILSNAVLRLSRG-EIEDMFVGECFNS-----DKQKYWRILEDKTAHFIEA 169

Query: 192 ACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
           + +S AI+     N+  ++   FG + G+ FQ+ DDLLD  +D
Sbjct: 170 SLKSMAILL----NKDAKMYADFGLHFGMAFQIIDDLLDITQD 208


>gi|315271285|gb|ACO46371.2| putative Polyprenyl synthetase [Deinococcus deserti VCD115]
          Length = 329

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           Y   GGK IRS L+   A    V H T     A  + A +E    + LIHDD+   D+  
Sbjct: 32  YPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDI--QDDSE 89

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            RRG+P +H  Y    AI  G+ L  Y +  +
Sbjct: 90  ERRGQPALHRLYGVPLAINVGDALHAYMWAAV 121


>gi|326533542|dbj|BAK05302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 424

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 12/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+   RRG  +++       +++AG+ LL+ A   +++      
Sbjct: 173 EMIHVASLLHDDV--LDDADTRRGVTSLNCIMGNKLSVLAGDFLLSRACVALAALGNT-- 228

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             + S +  ++ H +  + M   QM   +++    +  + +QK   KT +L+  +C++ A
Sbjct: 229 -EVVSLMATAVGHLVTGETM---QMSTSREQ--RRSMEYYLQKTYYKTASLISNSCKAVA 282

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           I+A  +         +G NLG+ FQL DD+LD
Sbjct: 283 ILAGHTAEVSVLAYEYGRNLGLAFQLIDDVLD 314


>gi|108562668|ref|YP_626984.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           HPAG1]
 gi|107836441|gb|ABF84310.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           HPAG1]
          Length = 307

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGEVIAQAL-SNAVLRLSRG------------EIEDVFVGGSFNSDKQKYWCILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLNFGMAFQIIDDLLDITQD 208


>gi|62389517|ref|YP_224919.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41324851|emb|CAF19333.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 372

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 37/220 (16%)

Query: 40  LSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           L A   AL GGK IR  ++     T       V   T L+V  A+E +H   L+HDD+  
Sbjct: 49  LDAAFQALRGGKLIRPRMLLGLYNTLVDDDIEVKLNTVLQVAVALELLHFSLLVHDDV-- 106

Query: 95  MDNGYIRRGKPTV---------------------HIQYDEVTAIIAGNGLLTYAFEIISS 133
           +D    RRGK                        H+ + +   ++ GN  L    +I + 
Sbjct: 107 IDGDLYRRGKLNFIGQILMHRTPESFAQIQRDPEHLDWAQSNGLLMGNLFLAATHQIFA- 165

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ--KMKTGALM 189
            +  L  + R +L+  L H I     + G+ LD+    + I       ++  ++KT    
Sbjct: 166 -RLDLPHHQRVRLLDLLNHTIN--DTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYT 222

Query: 190 C-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 + AI+A   Q  + ++   G NLGI +QL DD L
Sbjct: 223 FELPMRAAAILAELPQEIETKIGEIGTNLGIAYQLQDDYL 262


>gi|289582888|ref|YP_003481354.1| polyprenyl synthetase [Natrialba magadii ATCC 43099]
 gi|289532441|gb|ADD06792.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099]
          Length = 354

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 11/204 (5%)

Query: 38  RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           R LS   + LL  GGK+ R+ L       F  +    +      E +H  ++I DD+   
Sbjct: 47  RALSDPLWDLLDRGGKRWRAVLFLVFIEGFGEDPTEYMPYACIPEILHNGTIIVDDV--E 104

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D    RRG+P +H  Y    A+ AGN L     +++      L    +      L   + 
Sbjct: 105 DQAAKRRGEPALHHIYGRDVALNAGNALYFLPLKLLRENPGDLPAEQQLAAYEMLMDELN 164

Query: 156 LQGMLGGQMLDI-----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              +  GQ +DI     ++  I   Q   +   KTG L        AI+     + +E +
Sbjct: 165 RTHL--GQGMDICWHNEREVRITPAQYLEMCACKTGCLGRIVARLAAIITDQPAHVEEAV 222

Query: 211 RCFGENLGIIFQLADDLLDCEEDL 234
             + E   + FQ+ DD+LD E  L
Sbjct: 223 ATYAELTAVAFQIGDDILDVENSL 246


>gi|207093075|ref|ZP_03240862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 270

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 24/168 (14%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAKAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +  + +S AI+    +N K     FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL--DKNAK-IYADFGLNFGMAFQIIDDLLDITQD 208


>gi|23308797|ref|NP_599861.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|21323391|dbj|BAB98019.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 382

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 37/220 (16%)

Query: 40  LSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           L A   AL GGK IR  ++     T       V   T L+V  A+E +H   L+HDD+  
Sbjct: 59  LDAAFQALRGGKLIRPRMLLGLYNTLVDDDIEVKLNTVLQVAVALELLHFSLLVHDDV-- 116

Query: 95  MDNGYIRRGKPTV---------------------HIQYDEVTAIIAGNGLLTYAFEIISS 133
           +D    RRGK                        H+ + +   ++ GN  L    +I + 
Sbjct: 117 IDGDLYRRGKLNFIGQILMHRTPESFAQIQRDPEHLDWAQSNGLLMGNLFLAATHQIFA- 175

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ--KMKTGALM 189
            +  L  + R +L+  L H I     + G+ LD+    + I       ++  ++KT    
Sbjct: 176 -RLDLPHHQRVRLLDLLNHTIN--DTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYT 232

Query: 190 C-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 + AI+A   Q  + ++   G NLGI +QL DD L
Sbjct: 233 FELPMRAAAILAELPQEIETKIGEIGTNLGIAYQLQDDYL 272


>gi|1749416|dbj|BAA13767.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 339

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%)

Query: 48  LGGKKIRSFLVTECASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           LGGK  R   V +   +          ++ A  +G  +E +  + LI DD+  MD    R
Sbjct: 32  LGGKYNRGLSVIDSYEILLGHPLDEAAYMKAAVLGWMVELLQSFFLIADDI--MDASKTR 89

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQ 157
           RG+P  ++          GN  +  AF + S+    LK + R +     ++ L H++  Q
Sbjct: 90  RGQPCWYLMPG------VGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQ 143

Query: 158 GMLGGQM--LDIQDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERL 210
             LG Q+  L   ++ +D ++ F +QK     +   A   F       M  A     E L
Sbjct: 144 TELGQQLDLLTAPEDSVDLSK-FSLQKHSFIVIYKTAFYSFYLPVELAMHLAGVATPENL 202

Query: 211 RCFGENL---GIIFQLADDLLDCEED 233
           +C  + L   G  FQ+ DD LDC  D
Sbjct: 203 KCAQDILIILGKYFQVQDDYLDCYGD 228


>gi|270656515|ref|ZP_06222316.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212]
 gi|270317032|gb|EFA28689.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212]
          Length = 127

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFE 129
            ++    +++ G+ + T AF+
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQ 127


>gi|57753869|dbj|BAD86799.1| geranylgeranyl diphosphate synthase [Streptomyces sp. KO-3988]
          Length = 388

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 36/212 (16%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK+IR  L             T   +GAA  +E  H ++LIHDD+  MD    RRG+PT
Sbjct: 86  GGKRIRPLLCMVGWHAAGGYGETEPIIGAAASLELFHAFTLIHDDV--MDASDTRRGRPT 143

Query: 107 VHI------------QYDEVTAIIAGNGLLTYAFEIISSPK---------TQLKDNIRSQ 145
           +H             ++   +AI+ G+ ++ ++ E++ S             L D +R++
Sbjct: 144 LHRTLETGANGTTAERFGTNSAILLGDLVMVWSDELLYSSGLDQQQLVAVRPLLDAMRTE 203

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQ 204
           +M+    +          +L       D  +   + + KT           GA +A A Q
Sbjct: 204 VMIGQYRD----------LLSTGQPTADVERSLAVIRYKTAKYTVERPLHIGAALAGADQ 253

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +    +   +G  FQL DDLL    D  K
Sbjct: 254 SLLDVCTAYALPIGEAFQLRDDLLGVFGDPSK 285


>gi|124800714|ref|XP_001349541.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7]
 gi|3845103|gb|AAC71816.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7]
          Length = 538

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 29/171 (16%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS- 132
           ++ AA E IH  SL+HDD+  +D+   RRG   +H ++    +I++G+ LL  A  I + 
Sbjct: 268 KIIAASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAG 325

Query: 133 --SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET-QVFMIQKM-KTG 186
             SPK            +  + +  ++ ++ G+ L    +F  ++E  ++++I+   KT 
Sbjct: 326 TGSPK------------ICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTA 373

Query: 187 ALMC--FACESGAIMAHASQNEKERLRCF--GENLGIIFQLADDLLDCEED 233
           +L    FAC    I   + +N+     CF  G ++G+ FQL DD LD + D
Sbjct: 374 SLFSHLFAC----IAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYKID 420


>gi|323335062|gb|EGA76352.1| Bts1p [Saccharomyces cerevisiae Vin13]
          Length = 335

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R  L+ +   + N+       V   +E +H  SL+ DD+   DN  +RRG+ T H+
Sbjct: 35  GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            +   + I   N +   A +++S   T  K+ +   L+     N  L  +  GQ LDI  
Sbjct: 93  IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148

Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                E I   ++++   M KTG L          ++ +S +    L  F   LGII+Q+
Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207

Query: 224 ADDLLDCEE 232
            DD L+ ++
Sbjct: 208 RDDYLNLKD 216


>gi|323331234|gb|EGA72652.1| Bts1p [Saccharomyces cerevisiae AWRI796]
          Length = 292

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R  L+ +   + N+       V   +E +H  SL+ DD+   DN  +RRG+ T H+
Sbjct: 35  GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            +   + I   N +   A +++S   T  K+ +   L+     N  L  +  GQ LDI  
Sbjct: 93  IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148

Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                E I   ++++   M KTG L          ++ +S +    L  F   LGII+Q+
Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207

Query: 224 ADDLLDCEE 232
            DD L+ ++
Sbjct: 208 RDDYLNLKD 216


>gi|241722226|ref|XP_002413673.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
 gi|215507489|gb|EEC16981.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
          Length = 182

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 10/73 (13%)

Query: 167 IQDEFI------DETQVF--MIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +Q EF+      DE + F   IQK   KT +L+ FAC+S +I+    +  +E    +G N
Sbjct: 6   VQGEFMQLGSKEDEGERFSHYIQKTFKKTASLIAFACKSVSILGGGDEKVQEAAYQYGRN 65

Query: 217 LGIIFQLADDLLD 229
           +GI FQL DDLLD
Sbjct: 66  VGIAFQLVDDLLD 78


>gi|190407883|gb|EDV11148.1| hypothetical protein SCRG_02424 [Saccharomyces cerevisiae RM11-1a]
          Length = 335

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R  L+ +   + N+       V   +E +H  SL+ DD+   DN  +RRG+ T H+
Sbjct: 35  GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            +   + I   N +   A +++S   T  K+ +   L+     N  L  +  GQ LDI  
Sbjct: 93  IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148

Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                E I   ++++   M KTG L          ++ +S +    L  F   LGII+Q+
Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207

Query: 224 ADDLLDCEE 232
            DD L+ ++
Sbjct: 208 RDDYLNLKD 216


>gi|302554072|ref|ZP_07306414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
 gi|302471690|gb|EFL34783.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
          Length = 389

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 18/165 (10%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A       +   +
Sbjct: 135 ELVHNFTLLHDDV--MDRDATRRHRPTAWTVFGDEGAILAGDTLQALAL------RLLAQ 186

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-------DEFIDETQVFMIQKMKTGALMCFA 192
           D   +    +      +  +  GQ  D         D  +DE  V  + + KTGAL+  A
Sbjct: 187 DPHPAAPAAAALLADCVVELCAGQYADTALERRGPADVTLDE--VLAMAEAKTGALLGSA 244

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           C  G + A A   +   L  FG   G+ FQL DD++    D P++
Sbjct: 245 CAIGGLYAGAGDADVAALDAFGREAGLAFQLIDDVIGIWGD-PRR 288


>gi|326905223|gb|EGE52156.1| LOW QUALITY PROTEIN: polyprenyl synthetase idsB [Mycobacterium
           tuberculosis W-148]
          Length = 222

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I+  
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRIL-- 148

Query: 134 PKTQLKDN------IRSQLMLSLTHNIGL--QGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             T L D       IR   M  L   IG     +L GQ     D+++       +   KT
Sbjct: 149 --TGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYL------RMAAGKT 200

Query: 186 GALMCFACESGAIMAHA 202
            AL    C  GA++A+A
Sbjct: 201 AALTGCCCALGALVANA 217


>gi|6325188|ref|NP_015256.1| Bts1p [Saccharomyces cerevisiae S288c]
 gi|74676512|sp|Q12051|GGPPS_YEAST RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName: Full=BET2 suppressor
           protein 1; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|1079673|gb|AAB68296.1| Bts1p: geranylgeranyl diphosphate synthase [Saccharomyces
           cerevisiae]
 gi|1098641|gb|AAA83262.1| Bts1p [Saccharomyces cerevisiae]
 gi|51013155|gb|AAT92871.1| YPL069C [Saccharomyces cerevisiae]
 gi|151942726|gb|EDN61072.1| geranylgeranyl diphosphate synthase [Saccharomyces cerevisiae
           YJM789]
 gi|207340526|gb|EDZ68851.1| YPL069Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270516|gb|EEU05700.1| Bts1p [Saccharomyces cerevisiae JAY291]
 gi|259150089|emb|CAY86892.1| Bts1p [Saccharomyces cerevisiae EC1118]
 gi|285815470|tpg|DAA11362.1| TPA: Bts1p [Saccharomyces cerevisiae S288c]
 gi|323302759|gb|EGA56565.1| Bts1p [Saccharomyces cerevisiae FostersB]
 gi|323346212|gb|EGA80502.1| Bts1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 335

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R  L+ +   + N+       V   +E +H  SL+ DD+   DN  +RRG+ T H+
Sbjct: 35  GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            +   + I   N +   A +++S   T  K+ +   L+     N  L  +  GQ LDI  
Sbjct: 93  IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148

Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                E I   ++++   M KTG L          ++ +S +    L  F   LGII+Q+
Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207

Query: 224 ADDLLDCEE 232
            DD L+ ++
Sbjct: 208 RDDYLNLKD 216


>gi|295698494|ref|YP_003603149.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola
           USDA]
 gi|291157286|gb|ADD79731.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola
           USDA]
          Length = 318

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 87/185 (47%), Gaps = 13/185 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GKKIR  +    + +        +   + IE IH  +L+HDD+  +D+  IRRG+    
Sbjct: 43  SGKKIRPIITLLFSKILGYRGKKDIIAASLIEFIHIATLLHDDI--IDSSIIRRGRKKSS 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ +   + ++I    ++   N+ S+          +  ++ G++L + 
Sbjct: 101 IVFGNEISVLVGDFVYAKSLKMIVGLNSKKVLNLISK---------TVHMIIEGEILQLS 151

Query: 169 DEFIDETQ-VFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +  ++ +Q  +M I   KT +L   A      + +   ++K  L+ +G + G  FQL +D
Sbjct: 152 NRTLEISQETYMKIIYQKTSSLFETAAYILTFICNVDSDKKIALKNYGRHFGNAFQLIND 211

Query: 227 LLDCE 231
           + D +
Sbjct: 212 IKDYQ 216


>gi|260103263|ref|ZP_05753500.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
           20075]
 gi|260082932|gb|EEW67052.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
           20075]
          Length = 92

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L+   A +    +   + + ++IE +H  +LIHDD  ++D+  +RRG  ++ 
Sbjct: 5   GGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDD--TIDDSDLRRGNISIQ 62

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            ++ +  A+ AGN L T  F+++    T+
Sbjct: 63  AEFGKDVAVYAGNLLFTNFFDLMLDTTTE 91


>gi|93279242|pdb|2DH4|A Chain A, Geranylgeranyl Pyrophosphate Synthase
 gi|93279243|pdb|2DH4|B Chain B, Geranylgeranyl Pyrophosphate Synthase
 gi|149241336|pdb|2E8T|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Fspp And Ipp
 gi|149241337|pdb|2E8T|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Fspp And Ipp
 gi|149241342|pdb|2E8U|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ipp (P21)
 gi|149241343|pdb|2E8U|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ipp (P21)
 gi|149241348|pdb|2E8V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Product Ggpp (P21)
 gi|149241349|pdb|2E8V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Product Ggpp (P21)
 gi|149241352|pdb|2E8W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ipp
 gi|149241353|pdb|2E8W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ipp
 gi|149241356|pdb|2E8X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|149241357|pdb|2E8X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|149241362|pdb|2E90|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Pyrophosphate And Fpp
 gi|149241363|pdb|2E90|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Pyrophosphate And Fpp
 gi|149241366|pdb|2E91|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-91
 gi|149241367|pdb|2E91|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-91
 gi|149241372|pdb|2E92|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-261
 gi|149241373|pdb|2E92|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-261
 gi|149241378|pdb|2E93|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-629
 gi|149241379|pdb|2E93|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-629
 gi|149241382|pdb|2E94|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-364
 gi|149241383|pdb|2E94|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-364
 gi|149241388|pdb|2E95|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-675
 gi|149241389|pdb|2E95|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-675
 gi|187609232|pdb|2Z7H|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Inhibitor Bph-210
 gi|187609233|pdb|2Z7H|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Inhibitor Bph-210
 gi|193506615|pdb|2Z4V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ggpp (Inhibitory Site)
 gi|193506616|pdb|2Z4V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ggpp (Inhibitory Site)
 gi|193506617|pdb|2Z4W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-749
 gi|193506618|pdb|2Z4W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-749
 gi|193506619|pdb|2Z4X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-252 (P21)
 gi|193506620|pdb|2Z4X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-252 (P21)
 gi|193506621|pdb|2Z4Y|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-252
 gi|193506622|pdb|2Z4Y|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-252
 gi|193506623|pdb|2Z4Z|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-Sc01
 gi|193506624|pdb|2Z4Z|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-Sc01
 gi|193506625|pdb|2Z50|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-28
 gi|193506626|pdb|2Z50|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-28
 gi|193506627|pdb|2Z52|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-23
 gi|193506628|pdb|2Z52|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-23
 gi|193885258|pdb|2Z78|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-806
 gi|193885259|pdb|2Z78|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-806
 gi|193885260|pdb|2Z7I|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Inhibitor Bph-742
 gi|193885261|pdb|2Z7I|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Inhibitor Bph-742
 gi|218766582|pdb|2ZEU|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-715
 gi|218766583|pdb|2ZEU|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-715
 gi|218766584|pdb|2ZEV|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp And Bph-715
 gi|218766585|pdb|2ZEV|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp And Bph-715
          Length = 340

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R  L+ +   + N+       V   +E +H  SL+ DD+   DN  +RRG+ T H+
Sbjct: 40  GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 97

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            +   + I   N +   A +++S   T  K+ +   L+     N  L  +  GQ LDI  
Sbjct: 98  IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 153

Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                E I   ++++   M KTG L          ++ +S +    L  F   LGII+Q+
Sbjct: 154 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 212

Query: 224 ADDLLDCEE 232
            DD L+ ++
Sbjct: 213 RDDYLNLKD 221


>gi|323352034|gb|EGA84573.1| Bts1p [Saccharomyces cerevisiae VL3]
          Length = 301

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R  L+ +   + N+       V   +E +H  SL+ DD+   DN  +RRG+ T H+
Sbjct: 35  GKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHL 92

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
            +   + I   N +   A +++S   T  K+ +   L+     N  L  +  GQ LDI  
Sbjct: 93  IFGVPSTINTANYMYFRAMQLVSQLTT--KEPLYHNLITIF--NEELINLHRGQGLDIYW 148

Query: 169 ----DEFIDETQVFMIQKM-KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                E I   ++++   M KTG L          ++ +S +    L  F   LGII+Q+
Sbjct: 149 RDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSSHH-GHSLVPFINLLGIIYQI 207

Query: 224 ADDLLDCEE 232
            DD L+ ++
Sbjct: 208 RDDYLNLKD 216


>gi|297564500|ref|YP_003683472.1| polyprenyl synthetase [Meiothermus silvanus DSM 9946]
 gi|296848949|gb|ADH61964.1| Polyprenyl synthetase [Meiothermus silvanus DSM 9946]
          Length = 332

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 22/197 (11%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  L+              L V AA+E    ++LIHDD+   D    RRG+
Sbjct: 39  YPERGGKMLRGMLLVYAGLAHGARLEQLLPVAAALELFQNWALIHDDIE--DASEERRGR 96

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQGMLG 161
           P +H  Y    A+ AG+ L    + ++   +     L + +R   + +   ++ +  M  
Sbjct: 97  PALHRLYGMPLALNAGDALHARMWAMLIEARASYLVLDEFVRVVDLTAQGQHLEMSWMQT 156

Query: 162 GQM-LDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            +  L  QD  +           +  ++ GAL      S  +   A+  E       G N
Sbjct: 157 HRFDLTEQDYLLMCAQKAAYYTAVAPLRLGAL------SAGVEPPATYIEA------GLN 204

Query: 217 LGIIFQLADDLLDCEED 233
           LGI FQ+ DD+L+ E D
Sbjct: 205 LGIGFQIVDDVLNLEGD 221


>gi|330961586|gb|EGH61846.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 205

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%)

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+  I+D    E     + + KT  L   +  S A + +AS  + E LR FG++LG+ FQ
Sbjct: 32  QLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNASDAQTEALRTFGDHLGVAFQ 91

Query: 223 LADDLLD 229
           L DDLLD
Sbjct: 92  LVDDLLD 98


>gi|324515875|gb|ADY46342.1| Farnesyl pyrophosphate synthase [Ascaris suum]
          Length = 338

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 21/209 (10%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR------VGAAIECIHCYSLIHD 90
           +R+     +A++GGK +R  L+    +  +  H T  R      VGA +E +  + LI D
Sbjct: 35  NRIDKLFEHAVIGGKCVRGRLLVAAYNALD-RHATRERIQQVATVGACLEILQAFFLIFD 93

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MD    RRGKP  H   D V      +GLL  +  +I+     + +N  ++  +S 
Sbjct: 94  DV--MDRSTTRRGKPCWHTLPD-VGLNAINDGLLLDS--VINEVLNDVLENDPNKDTVSS 148

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIM---AHASQ 204
                 Q  + GQMLD     + +    +   I   KT    CFA    A++        
Sbjct: 149 IFLRAKQMTVIGQMLDNSTSGLKDCTWERYGDIVTHKTSYYTCFAPLRVAMLLADRFMYA 208

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
           +E ER+      LG +FQ  DD LDC  D
Sbjct: 209 DETERI---AFKLGYLFQAQDDYLDCFGD 234


>gi|170290692|ref|YP_001737508.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174772|gb|ACB07825.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 352

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 19/192 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R +L    +    V+      +   IE +H  SLI DD+   D   +RRG   +H
Sbjct: 62  GGKRWRPWLFLVLSRNLGVDLERYKELALIIELLHNGSLIADDIE--DGAEVRRGDKAIH 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQML 165
           I+Y    A+   + +      I+        D ++ + ++    N  L+ M+    GQ  
Sbjct: 120 IKYGLDIAVNLSSAMYFLPLRILMEMNV---DELKYRRLV----NAYLEDMIRIHIGQAT 172

Query: 166 DI-------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           DI         E +       +   KTG L   A    AI A  S+ E+ R+  F E++G
Sbjct: 173 DIGWHRGLRDPETVGVEHYLEMCANKTGVLPRMAARFAAIAADLSEEEERRIGKFAESIG 232

Query: 219 IIFQLADDLLDC 230
           + FQ+ DD+L+ 
Sbjct: 233 VAFQIQDDILNL 244


>gi|255724742|ref|XP_002547300.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404]
 gi|240135191|gb|EER34745.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404]
          Length = 351

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 39/246 (15%)

Query: 14  KRIDTILDDLLLQ-----TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +R  ++ DD + +      +  M  +  D  +  + Y   GGK  R   V +  ++ N  
Sbjct: 9   ERFISVFDDAVEELKEVLVSYKMPQEAIDWFVKNLNYNTPGGKLNRGLSVVDTFAILNNT 68

Query: 69  HLTALR---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L          +G AIE +  Y L+ DD+  MD    RRG+   ++    V  +  
Sbjct: 69  TADKLNDEQYKKVALLGWAIELLQAYFLVADDM--MDQSKTRRGQKCWYL----VEGV-- 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI--QDEFID 173
           GN  +  +F +  +    LK + R       +L L H +  Q  LG Q+LD+   DE + 
Sbjct: 121 GNIAINDSFMLEGAIYVLLKKHFRQDPYYVDLLDLFHEVTFQTELG-QLLDLVTADEEVV 179

Query: 174 ETQVFMIQK------MKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLA 224
           +   F + K       KT A   F       M  +  N +E L+   +    LG  FQ+ 
Sbjct: 180 DLDKFSLDKHSFIVIFKT-AYYSFYLPVALAMYMSGINSEEDLKQVRDILIPLGEYFQIQ 238

Query: 225 DDLLDC 230
           DD LDC
Sbjct: 239 DDFLDC 244


>gi|224135433|ref|XP_002322072.1| predicted protein [Populus trichocarpa]
 gi|222869068|gb|EEF06199.1| predicted protein [Populus trichocarpa]
          Length = 236

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 83/176 (47%), Gaps = 16/176 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   N   A+   +A+  +H  +L H+ + S  N      +  +   +     ++ G+G+
Sbjct: 52  LVGGNRDQAMAAASALRLMHAAALTHEHILSTGN------RARIGHSFGSNIELLTGDGM 105

Query: 124 LTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178
           + +  E+++      ++N     ++++ +T  +G QGM  GQ    Q    ++ID     
Sbjct: 106 VPFGLELLAKSDDLTQNNSERILRVIIEITQAMGSQGMALGQYNQFQHGQSDYIDH---- 161

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            + K K G L   A   GAI+   ++ E E+LR +G  +G++  +  + ++ +E++
Sbjct: 162 -VCKKKEGELHSCAGAVGAILGGGTEEEIEKLRRYGLYVGLMQGVLSNWVERKEEV 216


>gi|297190113|ref|ZP_06907511.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721176|gb|EDY65084.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 354

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 47/241 (19%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSA----------IRYALLGGKKIRS---FLVTECASLFN 66
           +DD+LL    H   +  D LL+           +R A   GK++R+   +     A   +
Sbjct: 18  VDDVLL----HFVEEEIDHLLAVDGDLAPVADRLRIATNRGKRLRAAFCYWGWRAAGQPD 73

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT----------- 115
            + L  +R  AA+E +H  +++HDDL  +D+  +R G PT H+                 
Sbjct: 74  SDAL--VRAAAAMELVHAAAVVHDDL--IDDSPLRHGLPTAHVALRAAVVASPRPGAAAR 129

Query: 116 --AIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--Q 168
             A++ G+ L+++A ++ ++   P   L    R++ + ++      + ++ G+ L+I   
Sbjct: 130 SLAMLVGDLLMSWAGQLFTACGLPAAYLS---RARPLWAVL----ARELVAGECLEILRT 182

Query: 169 DEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               D      + + KT           G  +  A +  +E L  +G  LG  FQL DDL
Sbjct: 183 GAHPDTAASLKVIRYKTAKYTVEHPLHIGGALGGACEELREALSDYGLPLGEAFQLRDDL 242

Query: 228 L 228
           L
Sbjct: 243 L 243


>gi|282864692|ref|ZP_06273747.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282560631|gb|EFB66178.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 689

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 16/147 (10%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLM 147
           HDD+  MD+ Y RRG+P+ +  + +  AI+AG+ ++     +++   + ++ + + +   
Sbjct: 91  HDDV--MDHAYERRGRPSANALWGQHLAILAGDCVMLSGLGMLAELGRREVAEGVAASER 148

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS---- 203
           +         GM+  +  D+      E         KT  L   AC  GA+ A+ +    
Sbjct: 149 M-------CAGMV-RESADLHAASRSEESYLQAVGGKTAELFALACRLGAMQANGNGGRQ 200

Query: 204 -QNEKERLRCFGENLGIIFQLADDLLD 229
               +E L  FG  LG  +QL DD+LD
Sbjct: 201 EDGREEALAGFGWQLGHAYQLRDDILD 227


>gi|262153570|ref|ZP_06028698.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae INDRE 91/1]
 gi|262030597|gb|EEY49233.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae INDRE 91/1]
          Length = 232

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 6/134 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGK T +  +    +++ G+ + T +F+++    T+L  +++   ++S   N+  +G 
Sbjct: 1   MRRGKATANAAFGNAASVLVGDFIYTRSFQMM----TEL-GSMKILKLMSDAVNVIAEGE 55

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +  Q+++  D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG 
Sbjct: 56  VQ-QLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGT 114

Query: 220 IFQLADDLLDCEED 233
            FQL DD++D   D
Sbjct: 115 AFQLIDDVMDYTSD 128


>gi|328880104|emb|CCA53343.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
           pyrophosphate synthetase [Streptomyces venezuelae ATCC
           10712]
          Length = 350

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 35/202 (17%)

Query: 50  GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK++R+ F      +    +    LR  A++E +H  +++HDDL  +D+  +R G+PT H
Sbjct: 50  GKRLRAAFCYWGWRATRQPDSDALLRAAASMELVHAAAVVHDDL--IDDSPLRHGRPTAH 107

Query: 109 IQYDEVT-------------AIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTH 152
           +                   A++ G+ L++ A ++ ++   P   L       L  +L  
Sbjct: 108 VALGAAVRHHPRAADAARSLAMLVGDLLMSLAGQLFATSGLPAAYLGRA--RPLWAALAR 165

Query: 153 NIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES----GAIMAHASQNE 206
           +     ++ G+ L+I       D      + + KT     +  E     G  +A A +  
Sbjct: 166 D-----LIAGECLEILHTGGAPDTAASLKVIRYKTAK---YTVEQPLLIGGALAGAGERL 217

Query: 207 KERLRCFGENLGIIFQLADDLL 228
           +E    +G  LG  FQL DDLL
Sbjct: 218 REGFSAYGLPLGEAFQLRDDLL 239


>gi|171691761|ref|XP_001910805.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945829|emb|CAP72629.1| unnamed protein product [Podospora anserina S mat+]
          Length = 467

 Score = 48.1 bits (113), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 16/209 (7%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +D  L T   + T+  D++L+A    L G  GK  RS LV    +   V   +   +   
Sbjct: 163 EDFFLNT-KRLWTEQKDKVLTAPYDYLNGHPGKDFRSALVNAFDAFLEVPKESKETITKV 221

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +  +H  SL+ DD+   DN  +RRG P  H  Y     I + N +   A + +   K   
Sbjct: 222 VSMLHTASLLVDDV--EDNSLLRRGLPVAHTIYGIPQTINSSNYIYFVALQELQKLKNPK 279

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQML-DIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             NI ++ +L+L    G+       +    +DE+++     M+   KTG L     +   
Sbjct: 280 VVNIFAEELLNLHRGQGMDLYWRDTLTCPTEDEYLE-----MVGN-KTGGLFRLGIK--- 330

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADD 226
           +M   S++  + +      +G+IFQ+ADD
Sbjct: 331 LMQAESRSLTDCIPLVNV-IGLIFQIADD 358


>gi|158286675|ref|XP_308860.3| AGAP006894-PA [Anopheles gambiae str. PEST]
 gi|157020582|gb|EAA03964.3| AGAP006894-PA [Anopheles gambiae str. PEST]
          Length = 324

 Score = 48.1 bits (113), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 16/198 (8%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q + ++ LL    Y   + GK++RS L        ++ +     +   ++ +H  SL+ D
Sbjct: 19  QKEQDETLLQPFSYIQQIPGKQVRSKLALAINHWLHIPNDKLAAISEIVQMLHNSSLLID 78

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   DN  +RRG P  H  Y   + I A N +L  A E +          + ++ +L L
Sbjct: 79  DIE--DNSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGHPDATRVYTEQLLEL 136

Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G++       +  +D +    ET+   +   KTG L   A     +M   S+N K+
Sbjct: 137 HRGQGME-------IYWRDNYACPTETEYKQMTIRKTGGLFMLAIR---LMQLFSENRKD 186

Query: 209 RLRCFGENLGIIFQLADD 226
             +     LG+ FQ+ DD
Sbjct: 187 FTKLTA-ILGLYFQIRDD 203


>gi|195126086|ref|XP_002007505.1| GI12986 [Drosophila mojavensis]
 gi|193919114|gb|EDW17981.1| GI12986 [Drosophila mojavensis]
          Length = 337

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPPEKLTQIGEIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S+N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSEN-KEDFTKLTAILGLYFQIRDD 201


>gi|93278760|pdb|2AZK|A Chain A, Crystal Structure For The Mutant W136e Of Sulfolobus
           Solfataricus Hexaprenyl Pyrophosphate Synthase
 gi|93278761|pdb|2AZK|B Chain B, Crystal Structure For The Mutant W136e Of Sulfolobus
           Solfataricus Hexaprenyl Pyrophosphate Synthase
          Length = 289

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 20/156 (12%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  II +    
Sbjct: 77  AIEILHSASLALDDIVDLDA--TRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGD 134

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             D + + + L    ++G           ++D + D +      ++KTG+L      S  
Sbjct: 135 --DALNTSIELEKDTSVGA----------LRDMY-DNSDYIRTIELKTGSLFKL---STV 178

Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231
           + A+AS+  N K+++   G+ LGII+Q+ DD +D +
Sbjct: 179 LSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 214


>gi|157107955|ref|XP_001650014.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
 gi|108879453|gb|EAT43678.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
          Length = 321

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 22/202 (10%)

Query: 31  MQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +Q + +  LL    Y   + GK+ R+ +        N+       +G  ++ +H  SL+ 
Sbjct: 21  LQKEQDAILLEPFAYIQQIPGKQFRAKMALAFNHWLNIPEEKLAAIGEVVQMMHNSSLLI 80

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQL 146
           DD+   DN  +RRG P  H  Y   + I AGN +L  A   +     P+ Q    + ++ 
Sbjct: 81  DDIE--DNSILRRGIPVAHKIYGIASTINAGNYVLVLALAKVHGLGHPEAQ---QVVTEQ 135

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQ 204
           +L L    G++       +  +D FI  T+    Q +  KTG L   A     + +    
Sbjct: 136 LLELHRGQGME-------IYWRDNFICPTEAEYKQMVIRKTGGLFMLAIRLMQLFS---- 184

Query: 205 NEKERLRCFGENLGIIFQLADD 226
           ++K+        LG+ FQ+ DD
Sbjct: 185 DDKKDFTKLTAILGLSFQIRDD 206


>gi|147776970|emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
          Length = 298

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 18/174 (10%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD----NGYIRRGKPTVHIQYDEVTAIIA 119
           LF      A+   +A+  +H  S  H+ +P  D    N   R G PT    +     ++ 
Sbjct: 90  LFGGRRELAIAAASALHLMHAASYFHEHIPLTDQTRPNSPPRPG-PT----FGPNIELLT 144

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDE 174
           G+G++ +  E+++       D+  S    Q+++ LT  IG QG++ GQ +  Q DE    
Sbjct: 145 GDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRXIGSQGVVNGQYIQAQCDESSPS 204

Query: 175 T----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                   ++   K   L       GAI+    + E E+LR +G   G I +++
Sbjct: 205 VGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKMS 258


>gi|307636933|gb|ADN79383.1| octaprenyl-diphosphate synthase [Helicobacter pylori 908]
 gi|325995523|gb|ADZ50928.1| Octaprenyl-diphosphate synthase [Helicobacter pylori 2018]
 gi|325997121|gb|ADZ49329.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 2017]
          Length = 307

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG + G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLHFGMAFQIIDDLLDITQD 208


>gi|195013012|ref|XP_001983789.1| GH15381 [Drosophila grimshawi]
 gi|193897271|gb|EDV96137.1| GH15381 [Drosophila grimshawi]
          Length = 337

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPAEKLTQIGEIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F+   E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFVCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSAN-KEDYTKLTAILGLYFQIRDD 201


>gi|212545524|ref|XP_002152916.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210065885|gb|EEA19979.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 957

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 14/203 (6%)

Query: 29  SHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S   T   + LL    Y   L GK +RS L+    +   V   +   +   +  +H  SL
Sbjct: 659 SDWTTYEEEILLGPFNYLESLPGKNMRSQLIQSFNTWLKVPERSLTVIIKVVSMLHTASL 718

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+   D   +RRG+P  H  +    A+ +GN +   A   +   +     +I    +
Sbjct: 719 LIDDI--QDQSILRRGQPVAHSIFGTAQAMNSGNYVYFLALREVQKLQNPKAISIYVGSL 776

Query: 148 LSLTHNIGLQGMLGGQML-DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           + L    G++      ++   +++++D     M+   KTG L C A +     A    + 
Sbjct: 777 VDLHRGQGMELFWRDSLMCPTEEQYLD-----MVAN-KTGGLFCLAVQLMQAEATVQADF 830

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
              +R     LGIIFQ+ DD L+
Sbjct: 831 IPLVRL----LGIIFQICDDYLN 849


>gi|183233246|ref|XP_001913825.1| geranylgeranyl pyrophosphate synthetase [Entamoeba histolytica
           HM-1:IMSS]
 gi|169801661|gb|EDS89395.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba
           histolytica HM-1:IMSS]
          Length = 314

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 41/186 (22%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-------HIQ--------------- 110
           +R   A+E +H  +L HDD+  MD   +RR  PT+       +I+               
Sbjct: 35  IRTACAMELLHDSTLAHDDI--MDEDEMRRNAPTIVKTFYDKYIERNKEDVKTEKFLFMS 92

Query: 111 ----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
               Y    AI+ GN L + A  +     T +     ++++L L   +       GQ+LD
Sbjct: 93  RGTTYASSLAIMTGNILYSMAQRLCLESGTNI-----AEMVLELFSVLNY-----GQILD 142

Query: 167 IQD-EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +     ++E  + +I  MKT          G  +A  S+++ E  + +GE+ GI FQ+ D
Sbjct: 143 MSGLNTVEEYNLNII--MKTAIFFKTTASIGLTLAGRSEHDIELGKEWGEHFGIAFQMRD 200

Query: 226 DLLDCE 231
           DLLD +
Sbjct: 201 DLLDID 206


>gi|308184045|ref|YP_003928178.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           SJM180]
 gi|308059965|gb|ADO01861.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           SJM180]
          Length = 307

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGESFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDCEED 233
              +  + +S AI+     N+  ++   FG + G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL----NKDAKMYADFGLHFGMAFQIIDDLLDITQD 208


>gi|325068635|ref|ZP_08127308.1| Polyprenyl synthetase [Actinomyces oris K20]
          Length = 386

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 91/244 (37%), Gaps = 56/244 (22%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFL-VTECASLF----NVNHLT---ALRVGAAIECIHCY 85
           Q    LL A    L GGK++R+ L    CA L         LT   A+ +G A+E     
Sbjct: 35  QAAPELLEAAGSVLSGGKRMRAVLGAVGCAILSAPKQRAERLTGSDAVHLGTALELYQAS 94

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDE---------VTAIIAGNGLLTYAF-------- 128
           +L+HDDL  MD+   RRG P  H  +                  NG +            
Sbjct: 95  ALVHDDL--MDSADTRRGLPAAHRVFARNHEARGWLGRPQTFGANGAILLGDLLLSLAGE 152

Query: 129 EIISSPKTQLKDNIRSQLML-------SLTHNIGLQGMLGGQMLDIQDEFI----DETQV 177
           E+ +   ++     RS  +        ++T  + L     GQ LD++ E +    D+   
Sbjct: 153 EMSALAPSRASSQTRSSAVRYARSAFDAMTTEVAL-----GQFLDVRSENLPLPWDQEAG 207

Query: 178 FMIQKMKTGALMCFACESG-------------AIMAHASQNEKERLRCFGENLGIIFQLA 224
              ++M+  AL     +S                    S    E L  FGE++GI FQL 
Sbjct: 208 AAARRMQDEALSVVRHKSARYSVRHPLLIGALLAGLDPSGTTAEHLAAFGEDVGIAFQLR 267

Query: 225 DDLL 228
           DD L
Sbjct: 268 DDDL 271


>gi|15899101|ref|NP_343706.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
           [Sulfolobus solfataricus P2]
 gi|284173784|ref|ZP_06387753.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
           [Sulfolobus solfataricus 98/2]
 gi|13815644|gb|AAK42496.1| Geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
           [Sulfolobus solfataricus P2]
 gi|261600850|gb|ACX90453.1| Polyprenyl synthetase [Sulfolobus solfataricus 98/2]
          Length = 281

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  II +    
Sbjct: 69  AIEILHSASLALDDIVDLDA--TRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGD 126

Query: 138 LKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
             D + + + L    ++G L+ M             D +      ++KTG+L      S 
Sbjct: 127 --DALNTSIELWKDTSVGALRDMY------------DNSDYIRTIELKTGSLFKL---ST 169

Query: 197 AIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231
            + A+AS+  N K+++   G+ LGII+Q+ DD +D +
Sbjct: 170 VLSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206


>gi|260103264|ref|ZP_05753501.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
           20075]
 gi|260082925|gb|EEW67045.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
           20075]
          Length = 164

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 28/48 (58%)

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K KT AL   A E GA  A  +  +   L  FGENLGI FQ+ DDLLD
Sbjct: 38  KGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAFQIVDDLLD 85


>gi|238060507|ref|ZP_04605216.1| type I phosphodiesterase, nucleotide pyrophosphatase
           [Micromonospora sp. ATCC 39149]
 gi|237882318|gb|EEP71146.1| type I phosphodiesterase, nucleotide pyrophosphatase
           [Micromonospora sp. ATCC 39149]
          Length = 658

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 37/242 (15%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTA- 72
           R+D  L   L + A          + +A+ R+ L GGK++R      C   +        
Sbjct: 315 RVDAELAAFLDRQAPDWPDGAPRGVFTALHRFVLAGGKRLRPQF---CYWGWRGAGGEDG 371

Query: 73  -------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI---------------- 109
                  L   AA+E  H ++LIHDD+  +D    RRG P+VH                 
Sbjct: 372 GEDGSPILVASAALELFHAFALIHDDI--LDRSDRRRGAPSVHRLFADLHARSAWRGDPE 429

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y   TA++ G+    +A ++      +  + +R   + +L        ++ G+ LD+  
Sbjct: 430 AYGRNTALLCGDLCAAWADQMFHECGLRRDELLRGYAVFALMRTE----VIAGEYLDLVS 485

Query: 170 EFIDETQVFMIQKMKTGAL---MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              D +    +  ++  A    +    + GA +A         L  FG+ LG  FQL DD
Sbjct: 486 GVGDGSVASALTVIRLKAARYTVTRPLQIGAALAGGPPELAAALAEFGDPLGDAFQLRDD 545

Query: 227 LL 228
           +L
Sbjct: 546 VL 547


>gi|238586537|ref|XP_002391204.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553]
 gi|215455564|gb|EEB92134.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553]
          Length = 276

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 19/189 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS  +        V       +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 40  GKDIRSQFIAAFNLWLTVPEEKTKAIARVVNMLHSASLLIDDI--QDNSQLRRGSPVAHK 97

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLK--------DNIRSQLMLSLTHNIGLQGMLG 161
            Y     I   N +   AF+ IS  + +          D I +  +LSL    GL     
Sbjct: 98  IYGVPQTINTANYVYFLAFQEISKLREEDAKSRQGPDVDAIVTDELLSLHRGQGLDLFWR 157

Query: 162 GQM-LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             +    +DE+I      M+   KTG L+    +   +MA A+ N           +G+ 
Sbjct: 158 DSLQCPTEDEYIG-----MVNN-KTGGLLRIGIK--LMMAMATTNVSVNYVPLVNLIGVY 209

Query: 221 FQLADDLLD 229
           FQ+ DDLL+
Sbjct: 210 FQIRDDLLN 218


>gi|56756549|gb|AAW26447.1| SJCHGC00702 protein [Schistosoma japonicum]
          Length = 325

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IRS L+        V   T   + + I+ +H  SLI DD+   D  Y+RRGKP  H
Sbjct: 28  NGKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDDIE--DGSYLRRGKPAAH 85

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
             +   ++I + N +   A E +S  +      I ++ ML L    G+
Sbjct: 86  CVFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELHRGQGM 133


>gi|313837485|gb|EFS75199.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2]
 gi|314929303|gb|EFS93134.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1]
 gi|314971692|gb|EFT15790.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3]
 gi|328906969|gb|EGG26735.1| geranylgeranyl pyrophosphate synthase [Propionibacterium sp. P08]
          Length = 365

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)

Query: 39  LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +L A R    GGK++R    +     A+   V     L+   ++E +H  +L+HDDL  +
Sbjct: 43  VLDAARDYTGGGKRLRPAFCYWGHVAAAGQPVAPSGLLQAAGSLEFLHVSALVHDDL--I 100

Query: 96  DNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQ-- 137
           D+   RRG P+ H +++                   AI+ G+ LL ++ ++ +S   +  
Sbjct: 101 DHSNTRRGLPSAHRRFEAAHVTAHGDGSAEQFGFDVAILLGDLLLMWSSQMFTSAPVEAD 160

Query: 138 -------LKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
                  L D +R+++    +L +T   G+ G      LD+         V  + + K  
Sbjct: 161 RLAAAIPLFDAMRTEVTCGQVLDVTSQSGMAGSDSESALDL---------VGRVVEYKCA 211

Query: 187 ALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +       + G  +A  S   ++ +  FG  +G  FQ  DDLL
Sbjct: 212 SYTVVRPSQIGVALAGGSSRLQQTMADFGSPIGRAFQYRDDLL 254


>gi|330974647|gb|EGH74713.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 131

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEII 131
             +    +++ G+ L + +FE++
Sbjct: 101 ALWGNAPSVLVGDFLYSRSFEMM 123


>gi|156740413|ref|YP_001430542.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231741|gb|ABU56524.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 317

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 19/226 (8%)

Query: 17  DTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKK--IRSFLVTECASLFNVNHLTAL 73
           D I+ DL  ++   H + Q    +      AL G +K  +R+ LV   A L   +    +
Sbjct: 11  DEIVGDLAKVEQVIHARMQGRPIVAQTASAALRGMEKPYLRAALVVLAARLGRYDARRVI 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIIS 132
              AA E IH  + +HD+L  ++    RRG+P    +++   A+++G+ LL  A  E+  
Sbjct: 71  HAAAAAELIHFATAVHDNL--INEAARRRGQPIGDQRWNGDVALMSGDYLLALAASEMAL 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALM 189
           +P  ++  ++ S+++++      L  +     LD    Q E++ E+        +T AL 
Sbjct: 129 APDARII-SMYSRVVMTFCEG-RLAPVTAVAPLDQALAQHEYVVES--------RTAALF 178

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             A   G +   +       L  FG  LG+   +A ++ D E D P
Sbjct: 179 ETAARVGVVCGGSDDTLSNTLGRFGRELGMAMHIAAEVRDYEIDGP 224


>gi|110589268|gb|ABG77143.1| trans-hexaprenyltranstransferase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 168

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 8/162 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +      + + A IE IH  +L+HDD+  +D   +RR + T +
Sbjct: 14  GGKRLRPMLVLLAARACDYQGKRHINLAAIIEFIHTATLLHDDV--VDGSELRRNQETAN 71

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++ +      + +R   +LS   N   +G +  Q+L++ 
Sbjct: 72  AVWGNEASVLVGDFLYSRSFEMMVAV-----EQMRVMDILSHATNRIAEGEV-LQLLNVH 125

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           +    E     + K KT  L       G +++     +++ L
Sbjct: 126 NPETSEADYMEVIKRKTATLFEAGTRLGGVISGVDPQQEQAL 167


>gi|297197217|ref|ZP_06914614.1| predicted protein [Streptomyces sviceus ATCC 29083]
 gi|297146633|gb|EFH28249.1| predicted protein [Streptomyces sviceus ATCC 29083]
          Length = 277

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           LG  ++  + +  C          ALR+GAA+E I   +L+HDD+  MD   +RRG+P++
Sbjct: 185 LGRSRLVWWALRACGGAEPWRTHAALRIGAALELIQTCALVHDDV--MDGARLRRGRPSL 242

Query: 108 HI 109
           H+
Sbjct: 243 HV 244


>gi|291401904|ref|XP_002717322.1| PREDICTED: COenzyme Q (ubiquinone) biosynthesis family member
           (coq-1)-like [Oryctolagus cuniculus]
          Length = 512

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 49/189 (25%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 260 GKAFRPVIVVLMARACNIHHNNSRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRR 317

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK TV+  + E                     K  ++D +R + +               
Sbjct: 318 GKHTVNKIWGE---------------------KKVIEDLVRGEFL--------------- 341

Query: 163 QMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           Q+   ++E  +E     ++K   KT +L+  +C++ +++        E    +G+N+GI 
Sbjct: 342 QLGSKENE--NERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIA 399

Query: 221 FQLADDLLD 229
           FQL DD+LD
Sbjct: 400 FQLIDDVLD 408


>gi|225460953|ref|XP_002278023.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 298

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 18/166 (10%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMD----NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           A+   +A+  +H  S  H+ +P  D    N   R G PT    +     ++ G+G++ + 
Sbjct: 98  AIAAASALHLMHAASYFHEHIPLTDQPRANSPPRPG-PT----FGPNIELLTGDGMIPFG 152

Query: 128 FEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDET----QVF 178
            E+++       D+  S    Q+++ LT  IG QG++ GQ +  Q DE            
Sbjct: 153 LELLAKSNNLDDDDEHSDRILQVIIELTRTIGSQGVVNGQYIQAQCDESSPSVGKAGSTR 212

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           ++   K   L       GAI+    + E E+LR +G   G I +++
Sbjct: 213 IVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKMS 258


>gi|327311502|ref|YP_004338399.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947981|gb|AEA13087.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
          Length = 258

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV---GAAIECIHCYSL 87
           ++  N  L +AIRY +   GK IR  L+     + +   L   R+    A +E +H  SL
Sbjct: 23  ESVQNPSLRAAIRYYIETPGKMIRPLLLLLFTYVLDPERLKDERIINAAALLEVLHIVSL 82

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+  +D    RRG  T    Y +  AI+A + L+  A E   S              
Sbjct: 83  LQDDV--VDKHDARRGVETPRAIYGDGMAIVASDWLIAEAIERAVSISAD---------- 130

Query: 148 LSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            ++ +  G+   L  GQ LDI+    +  +      +KT  L+    E+  +M     + 
Sbjct: 131 -AVKYLAGVAKRLAEGQALDIEGLRKEAAE------LKTAPLI----EAAFVMPTMILSR 179

Query: 207 KERLR---CFGENLGIIFQLADDLLD 229
           ++ LR     G  LG+++Q +DD+ D
Sbjct: 180 RDLLRPAAALGRLLGVLYQYSDDMAD 205


>gi|148231821|ref|NP_001091413.1| geranylgeranyl diphosphate synthase 1 [Xenopus laevis]
 gi|126631300|gb|AAI33765.1| LOC100049104 protein [Xenopus laevis]
          Length = 296

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 20/193 (10%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK+IR+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYVLQLPGKQIRTKLSQAFNHWLNVPDDKIQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +       ++ +Q +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTMNHPNAVHVFTQQLLELHR----- 124

Query: 158 GMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
               GQ LDI  +D +    E +   +   KTG L   A     +M   S N+K+ L+  
Sbjct: 125 ----GQGLDIYWRDTYTCPSEAEYKAMVLQKTGGLFGLAV---GLMQLFSSNDKD-LKPL 176

Query: 214 GENLGIIFQLADD 226
              LG+ FQ+ DD
Sbjct: 177 LNTLGLFFQIRDD 189


>gi|310942864|pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942868|pdb|3OAC|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
          Length = 264

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 22/144 (15%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS----SP 134
           I  +H  + +H+ LP           P +  +Y     ++ G+G++ + FE+++      
Sbjct: 69  IHLVHAAAYVHEHLP-----------PAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPA 117

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQ---KMKTGALMC 190
           +T   D I  ++++ ++   G +GM+ G  L  ++E +D  T +  I+   K K G +  
Sbjct: 118 RTDDPDRIL-RVIIEISRAGGPEGMISG--LHREEEIVDGNTSLDFIEYVCKKKYGEMHA 174

Query: 191 FACESGAIMAHASQNEKERLRCFG 214
                GAI+  A++ E ++LR FG
Sbjct: 175 CGAACGAILGGAAEEEIQKLRNFG 198


>gi|220912326|ref|YP_002487635.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859204|gb|ACL39546.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
          Length = 364

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 30/155 (19%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDD 91
           D ++ +I   + GGK++R+ +   C   +            +  GAA+E     +LIHDD
Sbjct: 41  DPIMGSISNLVTGGKRLRALM---CYWGWRGAGGDAGAAEVVTAGAALELFQAAALIHDD 97

Query: 92  LPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPK 135
           +  +D    RRG P+VH ++ ++                 AI+AG+  L+++ E  +   
Sbjct: 98  I--IDRSDTRRGGPSVHRRFSQLHEAQGWALDSGRFGQAAAILAGDLCLSFSEEAFTDIG 155

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
            +     R++L+ +L        ++ GQ LDI +E
Sbjct: 156 ERAASGSRARLIFNLMR----AEVMAGQYLDILEE 186


>gi|67476710|ref|XP_653910.1| geranylgeranyl pyrophosphate synthase [Entamoeba histolytica
           HM-1:IMSS]
 gi|56470952|gb|EAL48563.1| geranylgeranyl pyrophosphate synthase, putative [Entamoeba
           histolytica HM-1:IMSS]
          Length = 349

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 41/186 (22%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-------HIQ--------------- 110
           +R   A+E +H  +L HDD+  MD   +RR  PT+       +I+               
Sbjct: 70  IRTACAMELLHDSTLAHDDI--MDEDEMRRNAPTIVKTFYDKYIERNKEDVKTEKFLFMS 127

Query: 111 ----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
               Y    AI+ GN L + A  +     T +     ++++L L   +       GQ+LD
Sbjct: 128 RGTTYASSLAIMTGNILYSMAQRLCLESGTNI-----AEMVLELFSVLNY-----GQILD 177

Query: 167 IQD-EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +     ++E  + +I  MKT          G  +A  S+++ E  + +GE+ GI FQ+ D
Sbjct: 178 MSGLNTVEEYNLNII--MKTAIFFKTTASIGLTLAGRSEHDIELGKEWGEHFGIAFQMRD 235

Query: 226 DLLDCE 231
           DLLD +
Sbjct: 236 DLLDID 241


>gi|302548937|ref|ZP_07301279.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
 gi|302466555|gb|EFL29648.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
          Length = 381

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 34/184 (18%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----QY-----------DEVTA 116
           AL  GAA+E +   +L+HDDL  MD    RRG+P +H     QY            E  A
Sbjct: 69  ALHAGAAVELLQTCALVHDDL--MDAATTRRGRPALHTAVARQYGDIPRGAARRLGEAAA 126

Query: 117 IIAGNGLLTYAFEIIS-------SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++AG+  L +A ++++           +    +R     + T  I       GQ LDIQ 
Sbjct: 127 VLAGDLALAWADDVMTDLLLDGDDLPPEAPARVRDIWRGTRTETI------AGQYLDIQG 180

Query: 170 EFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLAD 225
           +   +    +      +K+         +       +  E  +  C  G   G+ FQL D
Sbjct: 181 QATGQPTPARALRAACLKSALYTVERPLALGAALAGAGQEATQALCRAGRCAGLAFQLRD 240

Query: 226 DLLD 229
           DL D
Sbjct: 241 DLDD 244


>gi|313127585|ref|YP_004037855.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM
           11551]
 gi|312293950|gb|ADQ68410.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM
           11551]
          Length = 280

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 13/188 (6%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           AL GGK++R  +          +   A+    AIE +H  SL+      +D   IRRG P
Sbjct: 35  ALAGGKRVRPAVTILSCEACGGDADAAVDFAVAIELVHNASLVI--DDIIDRSDIRRGTP 92

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +   +Y    +IIA +GLL  AF ++S     ++  I ++ M+ L           G+  
Sbjct: 93  SAWAEYGYGPSIIASDGLLGEAFALLSVDDHAMQ--IVAESMVELGE---------GEAT 141

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           ++     +E +   + + KTGAL   A E GA+ A A     E    + E +G+ FQ+ D
Sbjct: 142 ELVARPTNEAEYMELARRKTGALFRAAAELGAVAADADPFTVEAFGEYAERVGVAFQIRD 201

Query: 226 DLLDCEED 233
           D+LD   D
Sbjct: 202 DVLDATAD 209


>gi|229583172|ref|YP_002841571.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228013888|gb|ACP49649.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 281

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 20/156 (12%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  II +    
Sbjct: 69  AIEILHSASLALDDIVDLD--VTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGD 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             D + + + L    ++G           ++D + +   +  I+ +KTG+L      S  
Sbjct: 127 --DALNTSIELWKDTSVGA----------LRDMYDNNDYIRTIE-LKTGSLFKL---STV 170

Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231
           + A+AS+  N K+++   G+ LGII+Q+ DD +D +
Sbjct: 171 LSAYASKHYNTKQQMLDVGKYLGIIYQIIDDFVDYK 206


>gi|282861732|ref|ZP_06270796.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282563548|gb|EFB69086.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 350

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 38/210 (18%)

Query: 43  IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +R A   GK++R+   +     A   + + L  +R  AA+E +H  +++HDDL  +D   
Sbjct: 45  LRTATAYGKRLRAAFCYWGWRAAGQPDSDAL--VRAAAAMELVHAAAVVHDDL--IDGSA 100

Query: 100 IRRGKPTVHIQYDEVT------------AIIAGNGLLTYAFEIISS---PKTQLK--DNI 142
           +R G PT                     A++ G+ L+++A ++  S   P   L     +
Sbjct: 101 LRHGLPTAQFALRAAVSGRRRPAAARSLALLVGDLLMSWAGQLFVSSGLPAAYLSRARPL 160

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES----GAI 198
            + L   L     L+ +  G + D++D      +V   +  K      +  E     G  
Sbjct: 161 WAALARELIAGECLEILRTGAVPDVRDSL----KVIRYKTAK------YTVEQPLLIGGA 210

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +A AS + +E    +G  LG  FQL DDLL
Sbjct: 211 LAGASPDLREAFSDYGLPLGEAFQLRDDLL 240


>gi|330835268|ref|YP_004409996.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4]
 gi|329567407|gb|AEB95512.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4]
          Length = 282

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 25/225 (11%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L E   R   I+D+L+      ++      ++   +Y +  GK+ R  L+          
Sbjct: 3   LMEFWFRSRVIIDELV---EKFLKETREWEVMEMSKYIMRDGKRFRGTLMFLFNGALGGE 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A E +H  SL  DD+   D   +RRG       Y     I   N L+  A 
Sbjct: 60  EKNAYPGALATEILHSASLALDDIVDYDE--LRRGMKAAWAVYTNRKVIFVSNYLIPTAL 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            IIS            +  L ++ ++     +G     ++D +  +       ++KT +L
Sbjct: 118 NIISG---------YGEKALKISVDLWKDTAVGA----LKDMYGKDDDYVRTVELKTASL 164

Query: 189 MCFACESGAIMAHASQNEKERLRCF---GENLGIIFQLADDLLDC 230
                   A++A  S  + E L      G+NLGII+Q+ DD +DC
Sbjct: 165 FKLP----AMLASFSSGKIELLDTLMEIGKNLGIIYQIVDDYVDC 205


>gi|119962314|ref|YP_946137.1| geranylgeranyl pyrophosphate synthase [Arthrobacter aurescens TC1]
 gi|119949173|gb|ABM08084.1| putative geranylgeranyl pyrophosphate synthase [Arthrobacter
           aurescens TC1]
          Length = 369

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 43/236 (18%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHD 90
           RL +     +LGGK +R  L+ E     + +         TA+ + AAIE +H   L+HD
Sbjct: 42  RLWALAGQNVLGGKFVRPLLLMETYDALHKHGPAEPHQRETAISIAAAIELLHYAFLLHD 101

Query: 91  DLPSMDNGYIRRGKPTV------------------------HIQYDEVTAIIAGNGLLTY 126
           D+  +D   +RRG P +                         + + +   I+ G+ LL  
Sbjct: 102 DV--IDGDLVRRGHPNLIGSLLAEAGETARTDGADGARAGSGLHWAQTGGILMGDMLLAA 159

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFI--DETQVFMIQK 182
             +  +  + +L   +R +L+  L H I     + G+ LD+   D  I  D   + M+  
Sbjct: 160 THQAFA--RAELPHELRLRLLDLLEHTI--NETVAGEQLDVGLGDGIIAPDLQTILMMCG 215

Query: 183 MKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
            KT          + A +A A    +  L   G +LG+ FQL DDLL    D P++
Sbjct: 216 YKTATYTFELPLRAAATLAGADFAVENALATAGRHLGLAFQLQDDLLSTFGD-PRR 270


>gi|50424267|ref|XP_460720.1| DEHA2F08272p [Debaryomyces hansenii CBS767]
 gi|49656389|emb|CAG89060.1| DEHA2F08272p [Debaryomyces hansenii]
          Length = 350

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 32/217 (14%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFN---VNHLTALR------VGAAIECIHCYSL 87
           D  +  + Y   GGK  R   V +   + N    N L++        +G  IE +  Y L
Sbjct: 36  DWFVGNLNYNTPGGKLNRGLSVIDTYCILNNTTANDLSSEEYSKVALLGWCIELLQAYFL 95

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL- 146
           + DD+  MD+   RRG+P  ++          GN  +  +F +  +    LK + R++  
Sbjct: 96  VADDM--MDHSKTRRGQPCWYLNEG------VGNIAINDSFMLEGALYILLKKHFRNEKY 147

Query: 147 ---MLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQK-----MKTGALMCFACESG 196
              +L L H +  Q  LG Q++D+   DE I +   F + K     +   A   F     
Sbjct: 148 YVDLLDLFHEVTFQTELG-QLIDLITADEEIVDLDKFSLSKHSFIVIYKTAYYSFYLPVA 206

Query: 197 AIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
             M  +  N ++ L+   +    LG  FQ+ DD LDC
Sbjct: 207 LAMFMSGINSEQDLKQVRDILIPLGEYFQIQDDFLDC 243


>gi|195428727|ref|XP_002062417.1| GK17525 [Drosophila willistoni]
 gi|194158502|gb|EDW73403.1| GK17525 [Drosophila willistoni]
          Length = 361

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  S++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFSYIQE--------------IPGKQFRSELALAFNHWLLIPAEMLTQIGDIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 RVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201


>gi|194865508|ref|XP_001971464.1| GG14418 [Drosophila erecta]
 gi|190653247|gb|EDV50490.1| GG14418 [Drosophila erecta]
          Length = 338

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQL 177

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
            +    N KE        LG+ FQ+ DD
Sbjct: 178 FS----NNKEDYSKLTAILGLYFQIRDD 201


>gi|225462001|ref|XP_002272641.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296089967|emb|CBI39786.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 27/214 (12%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSL 87
           Q  +R+L    Y + GGK  R   V +   L     LT      A  +G  IE +  Y L
Sbjct: 33  QWVERMLD---YNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVLGWCIEWLQAYFL 89

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+  MDN + RRG+P    +  +V  I A +G++    +I    K   K       +
Sbjct: 90  VLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVILRN-QIPRILKNHFKGKPYYVDL 145

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---ACESG 196
           L L + +  Q    GQM+D+      E  +          I + KT     +   AC   
Sbjct: 146 LDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVAC--A 202

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +MA  + +    ++     +GI FQ+ DD LDC
Sbjct: 203 LLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDC 236


>gi|296211695|ref|XP_002752610.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
           [Callithrix jacchus]
          Length = 261

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 16/132 (12%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR------YALLG-GKKIRSFLVTECA 62
           Q    R+        L + SH +T   + L+S         Y   G GK  R  +V   A
Sbjct: 61  QAGPDRLQWAKSSCTLGSMSHRETLFQELLISTSELKEMSEYYFDGKGKAFRPIIVALMA 120

Query: 63  SLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
              N++H  +  V A+        E IH  SL+HDD+  +D+   RRGK TV+  + E  
Sbjct: 121 RACNIHHNNSRHVQASQRTIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKK 178

Query: 116 AIIAGNGLLTYA 127
           A++AG+ +L+ A
Sbjct: 179 AVLAGDLILSAA 190


>gi|321475353|gb|EFX86316.1| hypothetical protein DAPPUDRAFT_313317 [Daphnia pulex]
          Length = 347

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 31/210 (14%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMD 96
           + Y L GGK  R   V E   +F  + +      TA+ +G A+E +  + L+ DD+  MD
Sbjct: 42  VEYNLKGGKMNRGLAVVESFMIFKNDQISEQDIETAIALGWAVEMLQAFFLVADDI--MD 99

Query: 97  NGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           +   RR KP  +   +  V A      L +  ++I+ S     KD      +L L H++ 
Sbjct: 100 DSLTRRMKPCWYRTNNLGVKAFNDSILLESLIYQILLS---YCKDRHYYLPILELFHDVT 156

Query: 156 LQGMLGGQMLDIQ-----------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           ++  L GQ +D+             +F  ET   ++ K KT     +     AI    S 
Sbjct: 157 MRTSL-GQAMDLHSTPDPNQSPDLSKFTMETYDAIV-KYKTAYYSFYL--PVAIAMRVSG 212

Query: 205 NEKERLRCFGEN----LGIIFQLADDLLDC 230
            + ERL    E+    +G  FQ+ DD LDC
Sbjct: 213 IQDERLFKQAEDILLPMGRFFQVQDDYLDC 242


>gi|227826552|ref|YP_002828331.1| polyprenyl synthetase [Sulfolobus islandicus M.14.25]
 gi|227829194|ref|YP_002830973.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229577963|ref|YP_002836361.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238618638|ref|YP_002913463.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4]
 gi|284996549|ref|YP_003418316.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227455641|gb|ACP34328.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227458347|gb|ACP37033.1| Polyprenyl synthetase [Sulfolobus islandicus M.14.25]
 gi|228008677|gb|ACP44439.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238379707|gb|ACR40795.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4]
 gi|284444444|gb|ADB85946.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323473631|gb|ADX84237.1| polyprenyl synthetase [Sulfolobus islandicus REY15A]
 gi|323476280|gb|ADX81518.1| Polyprenyl synthetase [Sulfolobus islandicus HVE10/4]
          Length = 281

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 20/156 (12%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  II +    
Sbjct: 69  AIEILHSASLALDDIVDLD--VTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGD 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             D + + + L    ++G           ++D + +   +  I+ +KTG+L      S  
Sbjct: 127 --DALNTSIELWKDTSVGA----------LRDMYDNNDYIRTIE-LKTGSLFKL---STV 170

Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231
           + A+AS+  N K+++   G+ LGII+Q+ DD +D +
Sbjct: 171 LSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206


>gi|217033468|ref|ZP_03438898.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10]
 gi|216944173|gb|EEC23601.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10]
          Length = 307

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 24/168 (14%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------TQVFMIQKMKT 185
           S            +L+     N  L+   G    +I+D F+ E       + + I + KT
Sbjct: 117 SK---------MGELIAKALSNAVLRLSRG----EIEDVFVGECFNSNKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +  + +S AI+      + +    FG N G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL---DKDAKIYADFGLNFGMAFQIVDDLLDIIQD 208


>gi|316972597|gb|EFV56270.1| octaprenyl pyrophosphate synthase / phytoene synthase [Trichinella
           spiralis]
          Length = 272

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 15/134 (11%)

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PTV+  +   TA   G        +II +  T L  +I +  ++S+   I L  ++ G++
Sbjct: 118 PTVNATHGYKTATFFG--------DIILAKATILLTSINNAEVISIVSKI-LDDLVKGEL 168

Query: 165 LDIQDEFIDETQVF--MIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           + ++    DE+++F   + K   KTG+L   + ++ A++A+ S+   + +  FG N G++
Sbjct: 169 IQMESG-SDESRLFSEYLTKCYKKTGSLFSNSLKAAAVLANCSELCVKNVYQFGRNFGLM 227

Query: 221 FQLADDLLD-CEED 233
           FQL DDLLD C  D
Sbjct: 228 FQLVDDLLDFCSVD 241


>gi|229583716|ref|YP_002842217.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27]
 gi|228018765|gb|ACP54172.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27]
          Length = 281

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 20/156 (12%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  II +    
Sbjct: 69  AIEILHSASLALDDIVDLD--VTRRGDKAAWVIYGNRKVIFITNYLIPTALRIIQTSYGD 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             D + + + L    ++G           ++D + +   +  I+ +KTG+L      S  
Sbjct: 127 --DALNTSIELWKDTSVGA----------LRDMYDNNDYIRTIE-LKTGSLFKL---STV 170

Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231
           + A+AS+  N K+++   G+ LGII+Q+ DD +D +
Sbjct: 171 LSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 206


>gi|262202475|ref|YP_003273683.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247]
 gi|262085822|gb|ACY21790.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247]
          Length = 377

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 30/207 (14%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA--IECIHCYSLIHDDLPSMDNGYIRRG 103
           AL GGK++R+      A       L A  V AA  IE  H  +LIHDD+  MD+   RRG
Sbjct: 66  ALSGGKRLRAAFCLWGARGAAGGDLPAGAVDAAAAIELFHLGALIHDDV--MDHSDRRRG 123

Query: 104 KPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI--RSQ 145
            PTVH +                + +  AI+AG+  L ++ E+++   +     I  R++
Sbjct: 124 MPTVHRRFADRHTADGLAGDPEAFGQAVAILAGDLCLMWSDEVLADAVSAASPEIGQRAR 183

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----FMIQKMKTGALMCFACESGAIMAH 201
            + SL  +      +GGQ LD+  +    T +     ++        +      G  +A 
Sbjct: 184 AVWSLMRD----ETVGGQYLDMLAQATPTTSLTRTRLVLHYKSAKYTVAQPLRLGGALAG 239

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLL 228
           A  +  +     G   G  FQL DDLL
Sbjct: 240 ADDDLLDAYESLGLIAGEAFQLRDDLL 266


>gi|218294741|ref|ZP_03495595.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
 gi|218244649|gb|EED11173.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
          Length = 330

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 22/199 (11%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  L    A         AL  G  +E    + LIHDD+   D    RRG+
Sbjct: 34  YPRRGGKMLRGLLTYYSALAHGAPEEAALLAGEGLELFQNWVLIHDDI--EDGSEERRGR 91

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P +H  +    A+ AG+ L    + +++  +   + ++  +++L   H + ++    GQ 
Sbjct: 92  PALHRLHPMPLALNAGDALHGEMWGLLA--EGVARGSLSPEVLLEF-HQV-VRRTAYGQH 147

Query: 165 LDI------QDEFIDETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKERLRCFG 214
           LD+      + +   E  + M+               GA++A    H    E       G
Sbjct: 148 LDLLWTLTGRLDLTPEDYLRMVAHKAAYYTAVAPLRLGALLAGNTPHPLYEEA------G 201

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG  FQ+ DD+L+ E D
Sbjct: 202 LKLGTAFQIVDDVLNLEGD 220


>gi|317038629|ref|XP_001401830.2| hypothetical protein ANI_1_1856184 [Aspergillus niger CBS 513.88]
          Length = 693

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 12/190 (6%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           +  K IR  ++       N     A +V   I  +H  SL+ DD+   DN  +RRG+PT 
Sbjct: 397 VPSKNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDI--QDNSELRRGRPTA 454

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +     I A    LT AFE      + +    R  ++  L     L+ +  GQ +D+
Sbjct: 455 YRVFGVAQTINAATHALTQAFEKAPHMGSSVSSPARMVMVCLLIEVDELRNLHVGQAMDL 514

Query: 168 ---QDEFIDETQVFM-IQKMKTGALMCFACE----SGAIMAHASQNEKERLRCFGENLGI 219
              +  +      ++ + ++KTGAL C A       G+  A A +  +  L     +LG 
Sbjct: 515 HWTRSGYRPSIADYLEMNRLKTGALFCLASNLLYIQGSFSAEAIK--QTDLSDLMISLGQ 572

Query: 220 IFQLADDLLD 229
            FQ  DD ++
Sbjct: 573 YFQARDDYIN 582


>gi|14573639|gb|AAK68152.1| farnesyldiphosphate synthase [x Citrofortunella microcarpa]
          Length = 341

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 27/218 (12%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIH 83
           H   Q  DR+L    Y + GGK  R   V +   L      T      +  +G  IE + 
Sbjct: 29  HDSRQWVDRMLD---YNVPGGKLNRGLSVVDSYRLLKEGKTTDDEFFLSSALGWCIEWLQ 85

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            Y L+ DD+  MD  + RRG+P    +  +V  I A +G+L     I    K   +D   
Sbjct: 86  AYFLVLDDI--MDGSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-HISRILKNHFRDKPY 141

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---A 192
              +L L + +  Q    GQM+D+      E  +          I + KT     +   A
Sbjct: 142 YVDLLDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPVA 200

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           C    +MA  + ++   ++     +GI FQ+ DD LDC
Sbjct: 201 C--ALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDC 236


>gi|302812791|ref|XP_002988082.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii]
 gi|300144188|gb|EFJ10874.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii]
          Length = 363

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 28/247 (11%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTEC 61
           G   +K  +   R+     +L+  + S   T  +   +S +  Y + GGK  R   V + 
Sbjct: 21  GSFKAKFMDAYHRLKK---ELIADSESFSHTFESREWVSEVLDYNVPGGKLNRGLSVVDS 77

Query: 62  ASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L              A  +G  IE +  Y LI DD+  MD+ + RRG+P    Q  +V
Sbjct: 78  LVLLRSGEELSEDELFLAFALGWCIEWLQAYFLILDDI--MDDSHTRRGQPCWFRQ-PKV 134

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEF 171
             I A +G+L     I    K    D    Q +  L   +  Q   G QMLD+       
Sbjct: 135 GLIAANDGILLRN-HISRILKRHFHDKPYYQDLRELFDEVEYQTACG-QMLDLITTPPGE 192

Query: 172 IDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQL 223
           +D ++  M     I K KT A   F       +  + +++K +          +G  FQ+
Sbjct: 193 VDLSKYVMDTYLRIVKYKT-AYYSFYLPVACALYMSGEDDKSKFESAERILVQMGTYFQI 251

Query: 224 ADDLLDC 230
            DD LDC
Sbjct: 252 QDDYLDC 258


>gi|331212927|ref|XP_003307733.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298136|gb|EFP74727.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 452

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 34/188 (18%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA------ 127
           R+    E IH  SL+HDD+  +D    RRG+ +   Q+    +++AG+ LL  A      
Sbjct: 161 RLAEIAELIHVSSLLHDDV--IDQAETRRGQASAPRQFGSKLSVLAGDFLLARASLNLAR 218

Query: 128 ------FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG--GQMLDIQDEFIDETQV-- 177
                  E+ISS  + L +    QL   L  ++     L       ++Q   +  +    
Sbjct: 219 LRNFEVIELISSVISNLVEGELIQLESILVPHLQNPPKLAPSSDPSNLQSTSLAHSPAAF 278

Query: 178 ------FMIQK--MKTGALMCFACESGAIMAHA--------SQNEKERLRCFGENLGIIF 221
                 F ++K  +KT +L+   C +  I++ +        +Q   E    FG++LG+ F
Sbjct: 279 DPRLFDFYMRKNYLKTASLIAKTCRAAVILSSSSSSPPSPQTQELIEASYQFGKHLGLAF 338

Query: 222 QLADDLLD 229
           Q+ DD+LD
Sbjct: 339 QIVDDILD 346


>gi|302388553|ref|YP_003824375.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
 gi|302199181|gb|ADL06752.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
          Length = 328

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 13/186 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK IR++ +  C S+   + + A  + + +A+E +H  +L+HDD+  +D+   RRG  T+
Sbjct: 51  GKFIRAYGLMAC-SMDEEDKVPADAVTLASAVELLHLATLVHDDV--IDDADTRRGIETL 107

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++ +  A+I G+    Y   +     + +    ++Q       N   +  +G    +I
Sbjct: 108 QKRFGKKAAVICGD----YLLSLALKLASSIPQ--KNQYEALDMPNYLCRICMGELRQEI 161

Query: 168 QDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            +  +D +  +   I K KT AL   +   GA+++   + +    R  G ++G+IFQL D
Sbjct: 162 NNGNLDLSVYRYLSIIKGKTAALFEASFHGGAMLSTKDERKLRMYRKAGNDVGMIFQLMD 221

Query: 226 DLLDCE 231
           D +D E
Sbjct: 222 DCIDYE 227


>gi|269127237|ref|YP_003300607.1| polyprenyl synthetase [Thermomonospora curvata DSM 43183]
 gi|268312195|gb|ACY98569.1| Polyprenyl synthetase [Thermomonospora curvata DSM 43183]
          Length = 353

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 26/171 (15%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGN 121
           ++E +   +LIHDD+  MD    RRG+P+ H +++                E +AI+ G+
Sbjct: 78  SLELLQASALIHDDV--MDASDTRRGQPSAHRRFEAMHREHGWRGGAAAFGEGSAILLGD 135

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQV 177
             L ++ E+  +     +   R + +  L        ++ GQ LD+ +        E  +
Sbjct: 136 LCLAWSAEMFDTSGLDTEALRRGRPVFDLMRTE----VICGQYLDMLESARGAGTVERAL 191

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +++       +      GA +A  +    E LR +G  LGI FQL DD+L
Sbjct: 192 TVVEFKSAKYTIERPLHMGAELAGGTPEVVEALRAYGRPLGIAFQLRDDVL 242


>gi|203287773|ref|YP_002222788.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1]
 gi|201084993|gb|ACH94567.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1]
          Length = 348

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 18/198 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGKKIR  L+   A     N+       ++   +E  H  SLI DD+   D    RRGKP
Sbjct: 57  GGKKIRPMLMILLAHALGYNNSDTENLYKLSMLLELPHSGSLIIDDIE--DGALKRRGKP 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           ++H+ Y    +I   N +     ++I  S+ KT  K  I      +L+ N+ L     GQ
Sbjct: 115 SIHLIYGLDNSINTANLIYFLPAKLIQTSNLKTSQKLIIYENFFTTLS-NLHL-----GQ 168

Query: 164 MLDI---QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            +DI      +I   + ++ + + KT +L   A     I+ +     K     F  N+G 
Sbjct: 169 GIDITLHNGTYIPSIEEYISLVEHKTSSLFGMAGFLAGILTNNENKAKNLYNTF-LNIGT 227

Query: 220 IFQLADDLLDCEEDLPKK 237
            FQ+ DD+ + ++ +  K
Sbjct: 228 YFQMIDDIKNIKDGVKGK 245


>gi|89894773|ref|YP_518260.1| hypothetical protein DSY2027 [Desulfitobacterium hafniense Y51]
 gi|89334221|dbj|BAE83816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 326

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 19/187 (10%)

Query: 49  GGKKI-RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI-RRGKPT 106
           GGK+     L+     +F+ N  T ++V  A+E     + I DD+   DN  +  R  P 
Sbjct: 46  GGKQYPWGNLLFTIGDVFSDNQETIVQVAVAMELYALAADIFDDIEDQDNDELPWRTIPA 105

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGG 162
                    AI   N +L  +F+ +++   Q      ++I   + ++  H    + +  G
Sbjct: 106 AQ-------AINTANLILFLSFKALAAINDQALYRQANDIFQTMGITACHGQNQEFLYEG 158

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q      + I   Q F   + K+GAL    C+  A++A    +    L  FG+NLGII Q
Sbjct: 159 Q------DAITLAQYFDTARKKSGALTAGTCKLAAVLAGCDTSLILDLEKFGQNLGIISQ 212

Query: 223 LADDLLD 229
           + +DL D
Sbjct: 213 IKNDLRD 219


>gi|260575018|ref|ZP_05843019.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp.
           SW2]
 gi|259022640|gb|EEW25935.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp.
           SW2]
          Length = 419

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 5/126 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67
           L E   R    + D +L+   + Q Q +  L S +R Y    GK +R  LV         
Sbjct: 211 LMETMARCKARVVDEILRLIPNKQPQRD--LYSLMRDYVQREGKGLRPTLVIATCMALGG 268

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +R  AA+E  H   L+HDD+   D    RRG PT+H+ +    A+ AG+G+  +A
Sbjct: 269 RFEDGVRAAAALEMFHNGFLVHDDI--ADESTHRRGLPTLHMSHGIGLAVNAGDGMHLFA 326

Query: 128 FEIISS 133
            ++  S
Sbjct: 327 VDMTLS 332


>gi|116670118|ref|YP_831051.1| polyprenyl synthetase [Arthrobacter sp. FB24]
 gi|116610227|gb|ABK02951.1| Polyprenyl synthetase [Arthrobacter sp. FB24]
          Length = 364

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%)

Query: 20  LDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-----VNHLTA 72
           L+D L    S M   +Q  D L+ +I   + GGK++R+ +   C   +            
Sbjct: 22  LNDFLATRQSVMSAISQDIDPLMGSISNLVTGGKRLRALM---CYWGWRGAGGEAAATEV 78

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TA 116
           +  G+A+E     +LIHDD+  +D    RRG P+VH ++ ++                 A
Sbjct: 79  VTAGSALELFQAAALIHDDI--IDRSDTRRGGPSVHRRFSQLHEDQGWALDSERFGHAAA 136

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           I+ G+  L+++ E      T + +   S     L  N+    ++ GQ LDI +E
Sbjct: 137 ILTGDLCLSFSEETF----TDIGEAAASGSQARLIFNLMRAEVMAGQYLDILEE 186


>gi|238060277|ref|ZP_04604986.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
 gi|237882088|gb|EEP70916.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
          Length = 360

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 51/217 (23%)

Query: 45  YALLGGKKIR---SFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           + L GGK++R   ++     A   + + + TAL   AA+E +   +LIHDDL  MD    
Sbjct: 51  FVLGGGKRLRPAFAYWGFRGAGGADADQVVTAL---AALEFVQASALIHDDL--MDRSDT 105

Query: 101 RRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIISS----PKTQLK- 139
           RRG+P VH ++                 +  AI+ G+  L ++ E++ S    P+   + 
Sbjct: 106 RRGEPAVHRRFAARHRGAGWGGDADGFGDAAAILLGDLCLVWSDELLHSAGLDPRVVARA 165

Query: 140 ----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
               D +R+++ +             GQ LD+  +   +T V    K+       +  E 
Sbjct: 166 RPVFDEMRTEVTV-------------GQYLDVLTQATGDTSVERAGKVARYKSAKYTVER 212

Query: 196 GAIMAHASQNEKERLRC----FGENLGIIFQLADDLL 228
             ++  A  +    +R     +G  LG  FQL DD+L
Sbjct: 213 PLLLGAALADAPAHVRAAYSAYGLPLGEAFQLRDDVL 249


>gi|327286120|ref|XP_003227779.1| PREDICTED: farnesyl pyrophosphate synthase-like [Anolis
           carolinensis]
          Length = 351

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 85/216 (39%), Gaps = 36/216 (16%)

Query: 38  RLLSAIRYALLGGKKIRSFLVT---------ECASLFNVNHLTALRVGAAIECIHCYSLI 88
           RL   + Y  +GGK  R   V          E     N  H  A+ VG  +E +  + L+
Sbjct: 44  RLKEVVEYNAIGGKYNRGLTVVSAFGELAGPEQQDPKNFQH--AMVVGWCVELLQAFFLV 101

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-- 146
            DD+  MD    RRG P  + +  E   + A N  L     + SS    LK + R Q   
Sbjct: 102 ADDI--MDGSLTRRGHPCWYKK--EGVGLAAVNDSLL----LESSIYRLLKRHCRGQPYY 153

Query: 147 --MLSLTHNIGLQGMLGGQMLDI-------QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             +L L      Q  LG Q LD+        D F +E +   I K KT A   F     A
Sbjct: 154 LNLLELFLQSAYQTELG-QTLDLISAPPVDLDSFTEE-RYKAIVKYKT-AFYSFYLPVAA 210

Query: 198 IMAHA---SQNEKERLRCFGENLGIIFQLADDLLDC 230
            M  A   S+ E    R     +G  FQ+ DD LDC
Sbjct: 211 AMYMAGIDSEEEHSHARTILLEMGEFFQIQDDYLDC 246


>gi|306822517|ref|ZP_07455895.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium dentium ATCC 27679]
 gi|304554062|gb|EFM41971.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium dentium ATCC 27679]
          Length = 391

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 34/208 (16%)

Query: 49  GGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R      SF      +    +    L +  A+E     +L+HDD+  +D+  +RR
Sbjct: 83  GGKRLRALLTLDSFRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRR 140

Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLT 151
           G+P+ H      T          I+ G+ L T + +I +    +L   D++     L++ 
Sbjct: 141 GRPSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAF-LTMH 199

Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHA-- 202
             + +     GQ+LD+  E   +D+ +  +     + + KT +    A     ++A    
Sbjct: 200 REVEI-----GQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLD 254

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   ++     G  LG+ FQLADDLLD 
Sbjct: 255 ASAARDLAMSIGLPLGLAFQLADDLLDV 282


>gi|296171238|ref|ZP_06852642.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894206|gb|EFG73963.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 429

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 44/209 (21%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS  V             ALR  A+ E +H ++L+ DD+  MD    RRG+P+ H
Sbjct: 125 GGKCLRSTFVYLGWLCGAAPGEAALRAAASFELLHVFALLQDDV--MDGSAERRGRPSAH 182

Query: 109 IQY----------------DEVTAIIAGNGLLTYAFEIISSP---KTQLK------DNIR 143
           +++                 E  AI+ G+  L ++ +++       T+L       D +R
Sbjct: 183 LRFARWHRERGLSGSSRRFGESAAILLGDLCLIWSEQMLRESGVDSTRLHRAWPRYDTMR 242

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCF-ACESGAIM 199
           ++L +             GQ  D+  +         V  + + K+G        E GA M
Sbjct: 243 TELAV-------------GQFADLTSDVRQMPSLEAVLDVARRKSGNYTVRRPLEIGAAM 289

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLL 228
           +        +L  +G  +G  FQL DD+L
Sbjct: 290 SDCDDRTLTQLGRYGAAVGEAFQLRDDVL 318


>gi|284030790|ref|YP_003380721.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
 gi|283810083|gb|ADB31922.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
          Length = 357

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 31/214 (14%)

Query: 40  LSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + A R A  GGK++R SF      +         L   A++E +H  +L+HDD+  MD+ 
Sbjct: 38  VQAARDATSGGKRLRPSFCYWGFRAAGGDPERPILTAAASLEMLHVSALVHDDV--MDSS 95

Query: 99  YIRRGKPTVHIQYDEV--------------------TAIIAGNGLLTYAFEIISSPKTQL 138
            +RRG P  H +++ +                     AI+ G+  L +A E++ +     
Sbjct: 96  DVRRGAPAAHKRFEALQRARTEASGTGGDPVGFGIGAAILLGDLCLIWADEMMHTSGFDA 155

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES--- 195
               R+              +  GQ LD+  +   E  +    ++       +  E    
Sbjct: 156 AALARASKFFDAVRV----EVTAGQYLDLVAQASGEADMDRALRVLRYKSATYTVERPLH 211

Query: 196 -GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            GA +    Q   + L  +G  LG  FQL DDLL
Sbjct: 212 IGAALGGGDQYLIDALSAYGLPLGEAFQLRDDLL 245


>gi|195376189|ref|XP_002046879.1| GJ13129 [Drosophila virilis]
 gi|194154037|gb|EDW69221.1| GJ13129 [Drosophila virilis]
          Length = 337

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 16/198 (8%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q + ++ LL    Y   + GK+ RS L         +      ++G  ++ +H  SL+ D
Sbjct: 17  QKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQIGEIVQMLHNSSLLID 76

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   DN  +RRG P  H  Y   + I A N  L  A E +          + ++ +L L
Sbjct: 77  DIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEATKVYTEQLLEL 134

Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G++       +  +D F    E+   ++   KTG L   A     +M   S N KE
Sbjct: 135 HRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---LMQLFSDN-KE 183

Query: 209 RLRCFGENLGIIFQLADD 226
                   LG+ FQ+ DD
Sbjct: 184 DYSKLTAILGLYFQIRDD 201


>gi|149245192|ref|XP_001527130.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449524|gb|EDK43780.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 351

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 28/215 (13%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFN---------VNHLTALRVGAAIECIHCYSL 87
           D    +++Y   GGK  R   V +  ++ N           +  A  +G AIE +  Y L
Sbjct: 37  DWFNKSLQYNTPGGKLNRGLSVVDTYAILNNTSADKLDDAQYKKAAILGWAIELLQAYFL 96

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+  MD    RRG+P  ++   E    IA N        I    +   + +     +
Sbjct: 97  VADDM--MDQSKTRRGQPCWYLA--EGVGNIAINDSFMLEGAIYEILRKHFRQDSYYVDL 152

Query: 148 LSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQK------MKTGALMCFACESGAI 198
           L L H +  Q  LG Q+LD+    +E +D ++ F + K       KT A   F       
Sbjct: 153 LDLFHEVTFQTELG-QLLDLVTADEEHVDLSK-FSLAKHSFIVIFKT-AYYSFYLPVALA 209

Query: 199 MAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
           M  +  ++ + L+   +    LG  FQ+ DD LDC
Sbjct: 210 MYMSGISDAKDLQQVKDILIPLGEYFQIQDDFLDC 244


>gi|163801010|ref|ZP_02194910.1| polyprenyl synthetase family protein [Vibrio sp. AND4]
 gi|159175359|gb|EDP60156.1| polyprenyl synthetase family protein [Vibrio sp. AND4]
          Length = 242

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 15/176 (8%)

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             +++  A+R+   IE +H  SLIHDD+   D+  +RRG   V  ++    AI  G+ L+
Sbjct: 11  LGIHYDDAVRLAVTIELLHNASLIHDDIQDKDS--VRRGAMAVWAKFGSSIAICTGDYLI 68

Query: 125 TYAFEI---ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMI 180
             AF +   +S  K+  K       +L  T    +   + GQ+ D+   E I   +   I
Sbjct: 69  AKAFGVLAEVSCSKSVPK-------LLEATQK-AVTTTIEGQIADLTAKEDIHRDEYEDI 120

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              K G L+  + E   I+     ++ +  R    NL + +Q+ DD+ D  +D  +
Sbjct: 121 AAKKAGPLLALSLELPLIVTE-KHSDIQTARHAAFNLAVAYQILDDINDSAKDFKR 175


>gi|134058744|emb|CAK38728.1| unnamed protein product [Aspergillus niger]
          Length = 401

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 23/189 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
            K IR  ++       N     A +V   I  +H  SL+ DD+   DN  +RRG+PT + 
Sbjct: 116 SKNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDI--QDNSELRRGRPTAYR 173

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            +     I A    LT AFE +     P T     D +R+   L +   + L     G  
Sbjct: 174 VFGVAQTINAATHALTQAFEKVVPLMKPGTSHGFFDELRN---LHVGQAMDLHWTRSGYR 230

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIMAHASQNEKERLRCFGENLGII 220
             I D          + ++KTGAL C A       G+  A A +  +  L     +LG  
Sbjct: 231 PSIAD-------YLEMNRLKTGALFCLASNLLYIQGSFSAEAIK--QTDLSDLMISLGQY 281

Query: 221 FQLADDLLD 229
           FQ  DD ++
Sbjct: 282 FQARDDYIN 290


>gi|309801449|ref|ZP_07695576.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022]
 gi|308221964|gb|EFO78249.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022]
          Length = 359

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 34/208 (16%)

Query: 49  GGKKIR------SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R      SF      +    +    L +  A+E     +L+HDD+  +D+  +RR
Sbjct: 51  GGKRLRALLTLDSFRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRR 108

Query: 103 GKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLT 151
           G+P+ H      T          I+ G+ L T + +I +    +L   D++     L++ 
Sbjct: 109 GRPSAHRALASGTHSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAF-LTMH 167

Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFM-----IQKMKTGALMCFACESGAIMAHA-- 202
             + +     GQ+LD+  E   +D+ +  +     + + KT +    A     ++A    
Sbjct: 168 REVEI-----GQVLDLAVELNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLD 222

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   ++     G  LG+ FQLADDLLD 
Sbjct: 223 ASAARDLAMSIGLPLGLAFQLADDLLDV 250


>gi|203284235|ref|YP_002221975.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly]
 gi|201083678|gb|ACH93269.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly]
          Length = 348

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 18/198 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  L+   A     N+       ++   +E  H  SLI DD+   D    RRGKP
Sbjct: 57  GGKRIRPMLMILLAHALGYNNSDTENLYKISMLLELPHSGSLIIDDIE--DGALKRRGKP 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           ++H+ Y    +I   N +     ++I  S+ KT  K  I      +L+ N+ L     GQ
Sbjct: 115 SIHLIYGLDNSINTANLIYFLPAKLIQTSNLKTSQKLIIYENFFTTLS-NLHL-----GQ 168

Query: 164 MLDI---QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            +DI      +I   + ++ + + KT +L   A     I+ +     K     F  N+G 
Sbjct: 169 GIDITLHNGTYIPSIEEYISLVEHKTSSLFGMAGFLAGILTNNENKAKNLYNTF-LNIGT 227

Query: 220 IFQLADDLLDCEEDLPKK 237
            FQ+ DD+ + ++ +  K
Sbjct: 228 YFQMIDDIKNIKDGVKGK 245


>gi|323463187|pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus
 gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus
          Length = 273

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 6/145 (4%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +  +H  +  H++LP  D       K  +  ++D    ++ G+G++ +  E+++      
Sbjct: 74  VHLMHVAAYTHENLPLTDGPM---SKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPT 130

Query: 139 KDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACES 195
           ++N    L  ++ LT  +G +G++ GQ  ++  ++  D   +  + K K G L       
Sbjct: 131 RNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCKKKEGTLHACGAAC 190

Query: 196 GAIMAHASQNEKERLRCFGENLGII 220
           GAI+    +++ E+LR FG  +G +
Sbjct: 191 GAILGGCDEDKIEKLRRFGLYVGTV 215


>gi|145294798|ref|YP_001137619.1| hypothetical protein cgR_0745 [Corynebacterium glutamicum R]
 gi|14517651|gb|AAK64296.1|AF159510_1 GGPP synthase [Corynebacterium glutamicum]
 gi|140844718|dbj|BAF53717.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 382

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 37/220 (16%)

Query: 40  LSAIRYALLGGKKIRSFLVTECASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           L A   AL GGK IR  ++             V   T L+V AA+E +H   L+HDD+  
Sbjct: 59  LDAAFQALRGGKLIRPRMLLGLYDALVDDDIEVKLNTVLQVAAALELLHFSLLVHDDV-- 116

Query: 95  MDNGYIRRGKPTV---------------------HIQYDEVTAIIAGNGLLTYAFEIISS 133
           +D    RRGK                        H+ + +   ++ GN  L    +I + 
Sbjct: 117 IDGDLYRRGKLNFIGQILIHRTPESFAQTQRDPEHLDWAQSNGLLMGNLFLAATHQIFA- 175

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ--KMKTGAL- 188
            +  L    R +L+  L H   +   + G+ LD+    + I       ++  ++KT    
Sbjct: 176 -RLDLPHPQRVRLLDLLNHT--MNDTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYS 232

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 + AI+A   Q  + ++   G NLGI +QL DD L
Sbjct: 233 FELPMRAAAILAELPQEIETQIGEIGTNLGIAYQLQDDYL 272


>gi|187918188|ref|YP_001883751.1| dimethylallyltransferase [Borrelia hermsii DAH]
 gi|119861036|gb|AAX16831.1| dimethylallyltransferase [Borrelia hermsii DAH]
          Length = 348

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 14/191 (7%)

Query: 49  GGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  L+   A      N N     ++   +E  H  SLI DD+   D    RRGKP
Sbjct: 57  GGKRIRPMLMILLAYALGYNNSNTKNLYKLSMLLELPHSGSLIIDDIE--DGAIKRRGKP 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            +H+ Y    +I   N +     ++I +   +       QL++       L  +  GQ +
Sbjct: 115 AIHLIYGLDNSINTANLIYFLPAKLIQTANLK----TSQQLLIYENFFTTLSNLHLGQGI 170

Query: 166 DI---QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           DI      +I   + ++ + ++KT +L   A     I+ +     K     F + LG  F
Sbjct: 171 DIAFHNGTYIPNVEEYISLVELKTSSLFGMAGFLAGILTNNENKAKNLYNTFMK-LGTCF 229

Query: 222 QLADDLLDCEE 232
           Q+ DD+ + ++
Sbjct: 230 QIIDDIKNIKD 240


>gi|46241272|gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 70/145 (48%), Gaps = 6/145 (4%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +  +H  +  H++LP  D       K  +  ++D    ++ G+G++ +  E+++      
Sbjct: 106 VHLMHVAAYTHENLPLTDGPM---SKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPT 162

Query: 139 KDNIRSQL--MLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACES 195
           ++N    L  ++ LT  +G +G++ GQ  ++  ++  D   +  + K K G L       
Sbjct: 163 RNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCKKKEGTLHACGAAC 222

Query: 196 GAIMAHASQNEKERLRCFGENLGII 220
           GAI+    +++ E+LR FG  +G +
Sbjct: 223 GAILGGCDEDKIEKLRRFGLYVGTV 247


>gi|307595824|ref|YP_003902141.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551025|gb|ADN51090.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 296

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHL-TALRVGAAIECIHCYSLIHDDLP 93
           D LL+A  + +   GK IR  LV   A +L N + L  A+   A++E IH  SL+ DD+ 
Sbjct: 39  DNLLNATYHYIRNRGKLIRPTLVLLMAYALGNGSGLERAILPAASVELIHTASLLQDDI- 97

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLT 151
            MD   IRRG  T +  Y   TA++A + ++  A E  I S     + + + S + L++ 
Sbjct: 98  -MDQQRIRRGVKTPYSIYGPHTAMLASDLIIAKAVEYAIRSGDNDIVFELLNSSIKLAIG 156

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERL 210
            +   +  L  +     D+++       +   KT +L+  +   GA   +   +E   ++
Sbjct: 157 QS--FESELSSRANVTIDDYL------RLIYYKTASLIESSMVVGAYSVNVKDDEVISKI 208

Query: 211 RCFGENLGIIFQLADDLLD 229
           R  G  +GI FQ+ DD++D
Sbjct: 209 RDVGRFVGIAFQVRDDVID 227


>gi|317506409|ref|ZP_07964214.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316255289|gb|EFV14554.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 354

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 11/156 (7%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V AA   +   +L+HDDL  +D+   R G+  V   +    A+  G+ LL  AF  +   
Sbjct: 85  VAAANTLLMASALVHDDL--VDHDECRYGRAAVWKAFGAPAAVHLGDALLALAFRTLRDA 142

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCF 191
               +D I+ ++          Q M  GQ  +    Q+      QV  +   K G  + +
Sbjct: 143 PAGARDEIQDRMAACA------QTMYAGQAAETLVEQNRAGSLEQVIDVAAAKAGNPVEY 196

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              SG + + A  +       FG + G+ FQ  +DL
Sbjct: 197 FVASGVLCSGAPADSVSAAAEFGLSFGMAFQFRNDL 232


>gi|118616234|ref|YP_904566.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans
           Agy99]
 gi|118568344|gb|ABL03095.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans
           Agy99]
          Length = 330

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 44/175 (25%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTY 126
           H ++L+ DD+  MD    RRG P VH+Q                + E  A++ G+  L +
Sbjct: 129 HAFALLQDDV--MDQSPQRRGSPAVHVQLARCHQRRGLSGAAARFGESAAVLLGDICLVW 186

Query: 127 AFEIISSPKTQLK---------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
           A +++     + +         D +R +L +             GQ+ D+ ++  + +  
Sbjct: 187 AEQMLRESGVEDRRLRQVWPRYDAMRIELAV-------------GQLCDLSNDIRNLSTL 233

Query: 176 -QVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             V  + + K+G        E GA MA   +   E+L  +G+ +G  FQL DD+L
Sbjct: 234 DAVLDVARRKSGNYTVRRPLEMGAAMADCDERTLEQLARYGDAVGEAFQLRDDML 288


>gi|62199628|gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera]
          Length = 341

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 27/214 (12%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSL 87
           Q  +R+L    Y + GGK  R   V +   L     LT      A  +G  IE +  Y L
Sbjct: 33  QWVERMLD---YNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVLGLCIEWLQAYFL 89

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+  MDN + RRG+P    +  +V  I A +G++    +I    K   K       +
Sbjct: 90  VLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVILRN-QIPRILKNHFKGKPYYVDL 145

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGAL---MCFACESG 196
           L L + +  Q    GQM+D+      E  +          I + KT      +  AC   
Sbjct: 146 LDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFHLPVAC--A 202

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +MA  + +    ++     +GI FQ+ DD LDC
Sbjct: 203 LLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDC 236


>gi|291457724|ref|ZP_06597114.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve
           DSM 20213]
 gi|291380777|gb|EFE88295.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve
           DSM 20213]
          Length = 363

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 38/211 (18%)

Query: 49  GGKKIRSFLVTEC--ASLFNVNHLTA-LR-----VGAAIECIHCYSLIHDDLPSMDNGYI 100
           GGK++R+ L  +   A +      T  +R     +  AIE     +L+HDD+  +D   +
Sbjct: 52  GGKRLRALLTLDAFDALMAQTGSSTPDMRDAMTDLACAIEVFQTAALVHDDI--IDESDL 109

Query: 101 RRGKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRS--QLMLS 149
           RRGKP+ H   ++            ++ G+ L T   EI      +L DN  +  +  L+
Sbjct: 110 RRGKPSAHRALEQAVHSGAIGHGLGLMLGDILATACIEIARRAARRL-DNTDAINEAFLT 168

Query: 150 LTHNIGLQGMLGGQMLDI---------QDEFIDET-QVFMIQKMKTGALMCFACESGAIM 199
           +   + +     GQ+LD+          D  +D +  VF  +      +        A  
Sbjct: 169 MQREVEI-----GQVLDLAVELTPLEDPDALVDASLNVFRWKTASYTTIAPLLFALLAAG 223

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A  ++  ++ L   G  LG+ FQLADDLLD 
Sbjct: 224 ADPAEAWQQAL-AVGRPLGLAFQLADDLLDV 253


>gi|1491641|emb|CAA59170.1| dimethylallyltransferase [Capsicum annuum]
          Length = 342

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 35/214 (16%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSM 95
           + Y + GGK  R   V +  SL +            A  +G  IE +  Y L+ DD+  M
Sbjct: 39  LEYNVPGGKLNRGLSVIDSYSLVDDGKELTRDEIFKASALGWCIEWLQAYFLVLDDI--M 96

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISS---PKTQLKDNIRSQLMLSL 150
           DN + RRG+P  + + ++V  I   +G+L   +   I+ +   PK+   D      +L L
Sbjct: 97  DNSHTRRGQPCWY-KVEKVGMIAVNDGILLRNHISRILKNHFRPKSYYVD------LLDL 149

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---ACESGAIM 199
            + +  Q    GQM+D+    + E  +          I + KT     +   AC    +M
Sbjct: 150 FNEVEFQTA-SGQMIDLITTHVGEKDLSKYSLPIHCRIVQYKTAYYSFYLPVAC--ALLM 206

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A  + +    ++     +GI FQ+ DD LDC  D
Sbjct: 207 AGENLDNHVDVKNILIEMGIYFQVQDDYLDCFAD 240


>gi|156042580|ref|XP_001587847.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980]
 gi|154695474|gb|EDN95212.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 220

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 14/130 (10%)

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----F 171
           A++AG+ LL+ A    S    +L+D   ++L+ ++  N+ ++G         QDE    +
Sbjct: 2   AVLAGDFLLSRA----SVALARLRDAEVTELLATVIANL-VEGEFMQLKNTAQDEKNPVW 56

Query: 172 IDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +ET  + +QK  +K+ +L+  +C + A++  +     +    +G+NLG+ FQL DD+LD
Sbjct: 57  TEETISYYLQKTYLKSASLISKSCRAAALLGGSDAVTVDAAYDYGKNLGLAFQLVDDMLD 116

Query: 230 ---CEEDLPK 236
               E++L K
Sbjct: 117 YTITEKELGK 126


>gi|166835923|gb|ABY90133.1| geranyl-diphosphate synthase [Glycine max]
          Length = 283

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 10/119 (8%)

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQ----- 163
           Y     ++ G+G++ + FE+++ P      +     ++M+ ++  +G  G+   Q     
Sbjct: 126 YGPNIELLTGDGIVPFGFELLARPDGPASASPERVLRVMIEISRAVGSVGLQDAQYVKKT 185

Query: 164 MLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           + D  +E   ++  Q F+++K   G   C A  SGAI+   S+++ ERLR FG ++G++
Sbjct: 186 LWDGGEEVQNVESMQRFVLEKRDGGLHACGAA-SGAILGGGSEDQIERLRNFGFHVGMM 243


>gi|328478740|gb|EGF48346.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus MTCC 5462]
          Length = 176

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 28/49 (57%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT AL   A  +GA + H S  +K+    FG  LG+ FQ+ DDLLD  +
Sbjct: 27  KTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 75


>gi|284031785|ref|YP_003381716.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
 gi|283811078|gb|ADB32917.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
          Length = 367

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 43/179 (24%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------------YDEVTAIIAGNG 122
           ++E +H ++LI DD+  MD+   RRG  TVH+Q               +    A++  + 
Sbjct: 88  SLELLHAFALIQDDV--MDDSATRRGSATVHVQLAHWAERQRRPVGAQFGRSAAVLLSDL 145

Query: 123 LLTYAFEIISS---PKTQLK------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
            L +A  ++     P   L       D +RS+L +             GQ  D+ +E   
Sbjct: 146 CLVWAERMLRESGLPAESLAKALPVYDLLRSELAV-------------GQFSDLLNENSA 192

Query: 174 ETQ---VFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 V  I + K+G        E GA+ A  S      LR +G  +G  FQL DDLL
Sbjct: 193 APSLNAVLDIARRKSGNYTVLRPLELGAVAAGCSPQVLAALRQYGTAIGEAFQLRDDLL 251


>gi|195338147|ref|XP_002035687.1| GM14833 [Drosophila sechellia]
 gi|195588444|ref|XP_002083968.1| GD14008 [Drosophila simulans]
 gi|194128780|gb|EDW50823.1| GM14833 [Drosophila sechellia]
 gi|194195977|gb|EDX09553.1| GD14008 [Drosophila simulans]
          Length = 338

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201


>gi|30795079|ref|NP_851529.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           rochei]
 gi|30698452|dbj|BAC76565.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           rochei]
          Length = 439

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 36/243 (14%)

Query: 16  IDTILDDLLLQTASHMQTQH----NDRLLSAIRYALLGGKKIRSFLVT----ECASLFNV 67
           +  +LD+ L +     +T       D      R+ L GGK+ R+ L       CA     
Sbjct: 68  VGRVLDEALAERLRRARTADPLFARDVAERMTRFTLEGGKRTRAQLAWWASRACAGRDAA 127

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------Y 111
               AL++GAA+E +   +L+HDD+  MD   +RRG+PT+H +                +
Sbjct: 128 VAAAALQIGAALELLQTCALVHDDV--MDRATLRRGRPTLHTELASGHEDRVGPERARRF 185

Query: 112 DEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
            +  A++AG+  L +A ++++ +P    K  +  +L   +        M+ GQ LD+  +
Sbjct: 186 GQSAAVLAGDLALAWADDLVAETPLAVWKAVVVRRLWSDMRTE-----MVAGQYLDLHGQ 240

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADD 226
                 +    +        ++ E    +  A     +    RL   G   G+ FQL DD
Sbjct: 241 ATAARSLARALRAACLKSALYSVERPLALGAAVAGADDVTLRRLCDAGRCAGMAFQLRDD 300

Query: 227 LLD 229
           L D
Sbjct: 301 LDD 303


>gi|71027225|ref|XP_763256.1| prenyl transferase [Theileria parva strain Muguga]
 gi|68350209|gb|EAN30973.1| prenyl transferase, putative [Theileria parva]
          Length = 453

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 11/162 (6%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  + E IH  SLIHDD+  +D   +RR   + H ++    +++ G+ LL+ + +II+S
Sbjct: 165 KLNISYELIHIGSLIHDDI--IDESDVRRNLMSSHKKFGVKFSVLFGDFLLSKSAQIITS 222

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +     NI+    LS T +  + G L    L+  D ++  + ++ I  +KT +L+    
Sbjct: 223 LQ-----NIKLVDKLSNTLDNLIHGELMYVNLNNNDLYL--SYLYKIY-LKTASLISNNI 274

Query: 194 ESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDL 234
            S + + +    +  E L   G ++G+ FQ+ DDLLD   +L
Sbjct: 275 SSVSHLTNQYNFQLDELLYIIGVHIGLSFQMCDDLLDYNSNL 316


>gi|68489506|ref|XP_711426.1| hypothetical protein CaO19.6674 [Candida albicans SC5314]
 gi|46432727|gb|EAK92197.1| hypothetical protein CaO19.6674 [Candida albicans SC5314]
 gi|238882748|gb|EEQ46386.1| hypothetical protein CAWG_04735 [Candida albicans WO-1]
          Length = 332

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 21/168 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF---EI 130
           R+   I   H  SL+ DD+   D+   RRG P  H++Y   T I  GN +   A    + 
Sbjct: 63  RISEIISVFHNSSLLIDDIE--DDSKYRRGVPVAHVKYGIPTTINCGNLMYFVALQQAQQ 120

Query: 131 ISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQ 181
           +S P   ++   + SQ+++       L  +  GQ LDI         ++  D  +   + 
Sbjct: 121 LSGPHGSMEVKFKSSQILID-----ELLNLHRGQGLDIYWRDYLKKLEKLPDVEEYLEMI 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K KTG L   A +  ++ +   +N++  L      +GI++Q+ DD L+
Sbjct: 176 KDKTGGLFRLAIKLLSLYSDVKENDQ--LISLANLMGILYQVRDDYLN 221


>gi|24660002|ref|NP_523958.2| quemao, isoform A [Drosophila melanogaster]
 gi|281365769|ref|NP_001163370.1| quemao, isoform B [Drosophila melanogaster]
 gi|7295252|gb|AAF50574.1| quemao, isoform A [Drosophila melanogaster]
 gi|17946375|gb|AAL49221.1| RE65121p [Drosophila melanogaster]
 gi|272455081|gb|ACZ94641.1| quemao, isoform B [Drosophila melanogaster]
          Length = 338

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201


>gi|115373108|ref|ZP_01460410.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369864|gb|EAU68797.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 401

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 36/205 (17%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVG---------AAIECIHCYSLIHDDLPSM 95
           YAL   K++R  LV          HLT    G         A +E +H + LIHDD+   
Sbjct: 99  YALRPAKRLRPVLVVAG------YHLTRGGAGVPPGLWQFAAGLELLHTFLLIHDDV--A 150

Query: 96  DNGYIRRGKPTVH-----IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLS 149
           D   +RRG   +H      +  E  A++ G+ L   A E +    + L+   ++ Q  L+
Sbjct: 151 DRADLRRGGAALHHLLAPGRAGEDLAVVVGDHLFARAMEAMLG--SGLRGAAKACQYYLA 208

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL------MCFACESGAIMAHAS 203
           +  +        GQ LD+         V + Q ++   L       C     GAI+A A 
Sbjct: 209 VCRHTA-----AGQYLDLDLSRAALADVGLFQALRVAHLKTARYGFCAPLVCGAILAEAD 263

Query: 204 QNEKERLRCFGENLGIIFQLADDLL 228
           +   + L   G   G+ +QL DD+L
Sbjct: 264 EALCQGLERVGRYGGLAYQLRDDVL 288


>gi|310824306|ref|YP_003956664.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397378|gb|ADO74837.1| Geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 366

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 37/244 (15%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           + LQ    +I+  L +L  L   + + ++    ++    YAL   K++R  LV       
Sbjct: 25  TWLQLVQAQIEASLAELFELPDEACLDSRWKQAMVRTRAYALRPAKRLRPVLVVAG---- 80

Query: 66  NVNHLTALRVG---------AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-----IQY 111
              HLT    G         A +E +H + LIHDD+   D   +RRG   +H      + 
Sbjct: 81  --YHLTRGGAGVPPGLWQFAAGLELLHTFLLIHDDV--ADRADLRRGGAALHHLLAPGRA 136

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDE 170
            E  A++ G+ L   A E +    + L+   ++ Q  L++  +        GQ LD+   
Sbjct: 137 GEDLAVVVGDHLFARAMEAMLG--SGLRGAAKACQYYLAVCRHTA-----AGQYLDLDLS 189

Query: 171 FIDETQVFMIQKMKTGAL------MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                 V + Q ++   L       C     GAI+A A +   + L   G   G+ +QL 
Sbjct: 190 RAALADVGLFQALRVAHLKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQLR 249

Query: 225 DDLL 228
           DD+L
Sbjct: 250 DDVL 253


>gi|194747643|ref|XP_001956261.1| GF24684 [Drosophila ananassae]
 gi|190623543|gb|EDV39067.1| GF24684 [Drosophila ananassae]
          Length = 338

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPAEKLAQIGDIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201


>gi|328949593|ref|YP_004366928.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328449917|gb|AEB10818.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 327

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 24/196 (12%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  L+   A         AL   AA+E    + LIHDD+   D   +RRG+
Sbjct: 34  YPERGGKLLRGQLLLATAQAHGAPPERALPAAAALELFQNWVLIHDDI--EDASEMRRGR 91

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           PT+H  Y    A+ AG+ L    + ++   + P   L++  R   ++  T          
Sbjct: 92  PTLHRLYSVPLALNAGDALHAVMWRVLLEAAYPTPVLQEFAR---LVETTAR-------- 140

Query: 162 GQMLD---IQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GQ LD   I+ E  D   E  + M+++           + GA++  A           G 
Sbjct: 141 GQHLDLAWIEAERFDLSPEDYLEMVRQKAAYYTAVAPLKLGALV--AGHTPHPAFEPAGL 198

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ DD+L+ E
Sbjct: 199 QLGVAFQIIDDVLNLE 214


>gi|19074981|ref|NP_586487.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|19069706|emb|CAD26091.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 292

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 27/226 (11%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALR 74
           I  I+   +LQ +S         +L  + Y L GGK++R           N    +  L 
Sbjct: 2   IKEIVKSRILQMSSEYSKPE---VLFLLDYNLGGGKELRYKAYVHVLKALNGEVSMENLI 58

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G ++E +    LI DD+  MDN  IRRGKP  +++         G   +  AF ++ + 
Sbjct: 59  MGYSVELLQAVLLIVDDI--MDNSKIRRGKPCYYLK--------RGMKTVKDAFFLLGAI 108

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           +  L + ++     S+       G     +   + E+  ET V  I + KTGA   +   
Sbjct: 109 RKLLSEKMKKPYSDSVFKTC--LGQTHDTIRKTRSEYSLETYV-AIAESKTGAYTFYL-- 163

Query: 195 SGAIMAHASQNEKERLRCFGE--NLG-IIFQLADDLLDCEEDLPKK 237
             A++ + + N+ E   C  +  NLG +IFQ+ DD L+    LP+K
Sbjct: 164 -PAVLGYVAANKAEP-ACLWDFCNLGALIFQMQDDYLNF---LPEK 204


>gi|289619215|emb|CBI54483.1| unnamed protein product [Sordaria macrospora]
          Length = 347

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 31/232 (13%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL----LGGKKIRSFLVTECASLF------NVNH 69
           L++ LL+ A   +    +++LS  + +L    LGGK  R   V + AS+          +
Sbjct: 17  LEEALLEYAKAYKLP--EQMLSWYKQSLEVNALGGKCNRGMSVPDSASILLGRPLTEEEY 74

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A  +G   E +  + L+ DD+  MD+   RRGKP  ++Q  E   ++A N        
Sbjct: 75  FQAATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYLQ--EGVGMVAINDAFMLESA 130

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QDEFIDETQVFMI 180
           I +  K   K + R    L L H +  Q  + GQ+ D+          D F  +   F++
Sbjct: 131 IYTLLKKYFKSHPRYVDFLELFHEVTFQTEM-GQLCDLLTAPEDKVDLDNFSMDKYTFIV 189

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLD 229
             +   A   F       M        E L+   +    LG  FQ+ DD LD
Sbjct: 190 --IYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLD 239


>gi|195492530|ref|XP_002094031.1| GE21608 [Drosophila yakuba]
 gi|194180132|gb|EDW93743.1| GE21608 [Drosophila yakuba]
          Length = 338

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSTN-KEDYSKLTAILGLYFQIRDD 201


>gi|46117498|ref|XP_384767.1| hypothetical protein FG04591.1 [Gibberella zeae PH-1]
          Length = 368

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 28/208 (13%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            +H + + + + Y L L GK +RS ++        +       +   I  +H  SL+ DD
Sbjct: 29  ARHEEIIRAPLTYLLNLPGKDVRSKMIAAFNQWLKIPEDKLDVIKRIIMLLHNASLLLDD 88

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQLM 147
           +   D+  +RRG P  H  +     I A N    YAF +      +L D     I ++ +
Sbjct: 89  I--QDSSKLRRGLPVSHSIFGIAQTINAAN----YAFFLAQQELPKLGDARAFEIFTEEL 142

Query: 148 LSLTHNIGLQGMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L L           GQ +DI  +D  I   E + F +   KTG L   A +   +M  AS
Sbjct: 143 LHLHR---------GQGMDIYWRDASICPTEEEYFTMVSNKTGGLFRLAVK---LMQLAS 190

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231
           +++K+ +      LG+IFQ+ DD L+ +
Sbjct: 191 ESDKDYVPLVNV-LGVIFQIRDDYLNLQ 217


>gi|118465792|ref|YP_883046.1| polyprenyl synthetase [Mycobacterium avium 104]
 gi|118167079|gb|ABK67976.1| polyprenyl synthetase [Mycobacterium avium 104]
          Length = 392

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 28/172 (16%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGN 121
           + E +H ++L+ DD+  MD    RRG+P  H+Q+                 E  AI+ G+
Sbjct: 117 SFELLHAFALLQDDV--MDGAQERRGRPAAHLQFGRWHQDRGLSGSPRRFGESAAILLGD 174

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDET---QV 177
             L +A +++     + +     +L  +      ++  L  GQ  D+ ++         V
Sbjct: 175 LCLIWAEQMLRDSGLEAR-----RLQRAFPRYDAMRVELAVGQFADLTNDIRQSPGLDAV 229

Query: 178 FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             + + K+G        E GA MA        RL  +G  +G  FQL DD+L
Sbjct: 230 LEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRYGAAVGEAFQLRDDVL 281


>gi|2944400|gb|AAC05273.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster]
          Length = 338

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSSN-KEDYSKLTAILGLYFQIRDD 201


>gi|50355599|dbj|BAD29965.1| Phoma betae geranylgeranyl diphosphate synthase
          Length = 343

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 19/181 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L+        V   +   +G  +  +H  SL+ DD+   DN  +RRGKP    
Sbjct: 68  GKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASLLIDDI--QDNSELRRGKPVAQN 125

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +     I + N +   A E ++S K     +I ++ +L L           GQ +D+  
Sbjct: 126 IFGTALTINSANYVYFLALEKLNSLKNPNITDIFTEELLRLHR---------GQAMDLYW 176

Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D      E + F +   KTG L          M  A  +    L    E LG+IFQ+ D
Sbjct: 177 RDTLTCPTEEEYFEMVANKTGGLFRLMYR----MMKAESSMPIDLLPVVELLGVIFQVVD 232

Query: 226 D 226
           D
Sbjct: 233 D 233


>gi|303233112|ref|ZP_07319785.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4]
 gi|302480697|gb|EFL43784.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4]
          Length = 379

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 17/167 (10%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R+  A+E     +LIHDD+   D   +RRG P ++  +    AI  G+  L  A ++I 
Sbjct: 111 VRLACALELFQAAALIHDDI--ADESLVRRGNPCLYRTHGTGLAINMGDCALVDASKLIC 168

Query: 133 SPKTQ-LKDNIRSQLM---LSLTHNIGLQGMLGGQMLDI-----QDEFIDETQVFMIQKM 183
           +   + L  N   QL+   L++         + GQ LD+     +   +  +   ++ ++
Sbjct: 169 TLSAEGLPSNAALQLLDEFLTMERTT-----IEGQALDLGWSRARTWNLAPSDYLVMAEL 223

Query: 184 KTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT    +      GA+ A A +   + LR FG   G+ FQL DD L+
Sbjct: 224 KTAHYSLASPLVLGALFAQAPKALCDALREFGCAAGVAFQLRDDYLN 270


>gi|119606491|gb|EAW86085.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_b
           [Homo sapiens]
          Length = 306

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 190

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA 127
           GK TV+  + E  A++AG+ +L+ A
Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAA 215


>gi|39645583|gb|AAH63635.1| PDSS1 protein [Homo sapiens]
          Length = 306

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 133 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 190

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA 127
           GK TV+  + E  A++AG+ +L+ A
Sbjct: 191 GKHTVNKIWGEKKAVLAGDLILSAA 215


>gi|154304670|ref|XP_001552739.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10]
 gi|150853974|gb|EDN29166.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10]
          Length = 220

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 14/130 (10%)

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----F 171
           A++AG+ LL+ A    S    +L+D   ++L+ ++  N+ ++G         QDE    +
Sbjct: 2   AVLAGDFLLSRA----SVALARLRDAEVTELLATVIANL-VEGEFMQLKNTAQDEKNPVW 56

Query: 172 IDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +ET  + +QK  +K+ +L+  +C + A++  +     +    +G+NLG+ FQL DD+LD
Sbjct: 57  TEETISYYLQKTYLKSASLISKSCRAAALLGGSDGVTVDAAYDYGKNLGLAFQLVDDMLD 116

Query: 230 ---CEEDLPK 236
               E++L K
Sbjct: 117 YTISEKELGK 126


>gi|146303474|ref|YP_001190790.1| polyprenyl synthetase [Metallosphaera sedula DSM 5348]
 gi|145701724|gb|ABP94866.1| Polyprenyl synthetase [Metallosphaera sedula DSM 5348]
          Length = 279

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 75/191 (39%), Gaps = 24/191 (12%)

Query: 44  RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           +Y +  GK+ R  L+             A     A E +H  SL  DD+   D   IRRG
Sbjct: 32  KYIMRDGKRFRGTLMFLFNGALGGEEKDAYPGALATEILHSASLALDDIVDYDE--IRRG 89

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGG 162
                  Y     I   N L+  A  IIS    +    +R  + L     +G L+ M G 
Sbjct: 90  MKAAWAVYTNRKVIFVSNYLIPTALSIISGYGDK---ALRISVDLWKDTAVGALKDMYGK 146

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF---GENLGI 219
                     DE  V  I+ +KT +L         +++  S    E L      G++LGI
Sbjct: 147 ----------DEDYVRTIE-LKTASLFKLPT----MLSSFSSGRSEFLDTLMEAGKDLGI 191

Query: 220 IFQLADDLLDC 230
           I+QL DD +DC
Sbjct: 192 IYQLIDDYVDC 202


>gi|41409167|ref|NP_962003.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397987|gb|AAS05617.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 382

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 28/172 (16%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGN 121
           + E +H ++L+ DD+  MD    RRG+P  H+Q+                 E  AI+ G+
Sbjct: 107 SFELLHAFALLQDDV--MDGAQERRGRPAAHLQFGRWHQDRGLSGSPRRFGESAAILLGD 164

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDET---QV 177
             L +A +++     + +     +L  +      ++  L  GQ  D+ ++         V
Sbjct: 165 LCLIWAEQMLRDSGLEAR-----RLQRAWPRYDAMRVELAVGQFADLTNDIRQSPGLDAV 219

Query: 178 FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             + + K+G        E GA MA        RL  +G  +G  FQL DD+L
Sbjct: 220 LEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRYGAAVGEAFQLRDDVL 271


>gi|329897187|ref|ZP_08271927.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
           IMCC3088]
 gi|328921342|gb|EGG28736.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
           IMCC3088]
          Length = 361

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 14/179 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A  +  +   A    AA+E +H  SL+HDDL   D+   RRG+ T   
Sbjct: 71  GKHLRGKLAYSAARQYGSSSQAASSWAAAVELLHNASLVHDDLCDKDSK--RRGQQTTFR 128

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           QY E  A+  G+ L+  A+E  +          R+        +  +  ++GGQ  +   
Sbjct: 129 QYGEAVAVCLGDYLIAKAYEFAA----------RAGAESLHLLSSSISALVGGQAAEFAS 178

Query: 170 E-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             +   ++   I   KT  L+       A++   S  E E L  +  +  + FQ+ +D+
Sbjct: 179 AGYPAWSEYEQIAVSKTAPLLGMGVVGAALINQQSAPEAE-LEHYFYHAALCFQMINDI 236


>gi|258653364|ref|YP_003202520.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
 gi|258556589|gb|ACV79531.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
          Length = 377

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 39/211 (18%)

Query: 49  GGKKIRS-FLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           GGK++R  FL   C  L      T       L+V AA+E +   +L+HDD+  +D    R
Sbjct: 56  GGKRLRPQFL--WCGWLAGGGAATGPDADAVLQVAAALELLQACALLHDDI--IDRSQRR 111

Query: 102 RGKPTVH-----------IQYDE-----VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           RG+P+ H           +  D        AI+ G+  L +  ++  +    L    R+ 
Sbjct: 112 RGRPSTHRAVAKRAADAGVAADPEHHGVSVAILLGDLALAWCDDLFLAGALPLGAAHRAA 171

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQ-------DEFIDETQVFMIQKMKTGALMC-FACESGA 197
            +           +L GQ+LD+        D    E     + + KT A         GA
Sbjct: 172 PVWRAMRT----EVLAGQLLDLAVTVSAEADPATQERDAMRVNRYKTAAYTIERPLHLGA 227

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +A A+      LR +G ++G+ FQL DDLL
Sbjct: 228 ALAGAAPATIAALRTYGTDIGVAFQLRDDLL 258


>gi|254776305|ref|ZP_05217821.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 369

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 28/172 (16%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----------------EVTAIIAGN 121
           + E +H ++L+ DD+  MD    RRG+P  H+Q+                 E  AI+ G+
Sbjct: 94  SFELLHAFALLQDDV--MDGAQERRGRPAAHLQFGRWHQDRGLSGSPRRFGESAAILLGD 151

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDET---QV 177
             L +A +++     + +     +L  +      ++  L  GQ  D+ ++         V
Sbjct: 152 LCLIWAEQMLRDSGLEAR-----RLQRAFPRYDAMRVELAVGQFADLTNDIRQSPGLDAV 206

Query: 178 FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             + + K+G        E GA MA        RL  +G  +G  FQL DD+L
Sbjct: 207 LEVARRKSGNYTVRRPLEIGATMAGCDDRTVARLSRYGAAVGEAFQLRDDVL 258


>gi|313140540|ref|ZP_07802733.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium bifidum NCIMB 41171]
 gi|313133050|gb|EFR50667.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium bifidum NCIMB 41171]
          Length = 365

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 24/176 (13%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT---------AIIAGNGL 123
           L +  AIE     +L+HDD+  +D+  +RRGKP  H      +          I+ G+ L
Sbjct: 86  LDLACAIEVFQTAALVHDDI--IDDSDLRRGKPAAHKALGTTSHSASLGRGLGIMLGDLL 143

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T + +I  +   ++    R  +++S    +  +  +G Q+LD+  E   +DE +    +
Sbjct: 144 ATASVDIAHAAAQRMP---RPDMIVSTFLRMHREVEIG-QVLDLAVELSPLDEPERLARE 199

Query: 182 KM-----KTGALMCFACESGAIMAHASQNEKERLRC--FGENLGIIFQLADDLLDC 230
            M     KT +    A    A++A      +        G  LG  FQLADDLLD 
Sbjct: 200 SMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLPLGQAFQLADDLLDV 255


>gi|320583113|gb|EFW97329.1| Farnesyl pyrophosphate synthase [Pichia angusta DL-1]
          Length = 351

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 27/207 (13%)

Query: 37  DRLLSAI-RYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +R LS +  YALL G K    F   E          TA+ +G A+E +  Y L+ DD+  
Sbjct: 52  NRGLSVVDTYALLKGYKSFDDFEPEEYKK-------TAI-LGWAVELLQAYFLVADDM-- 101

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD    RRG+P  + + D V  I   +  +  A   +   K   KD+    L L L H +
Sbjct: 102 MDKSITRRGQPCWY-RVDGVNEIAINDSFMLEAAIYVLLKKYFRKDSYYVDL-LELFHEV 159

Query: 155 GLQGMLGGQMLDI---QDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNE 206
             Q  LG Q+LD+    ++ +D ++  +     I   KT A   F       M  A  ++
Sbjct: 160 TFQTELG-QLLDLLTAPEDHVDLSKFSLSKHSFIVTFKT-AYYSFYLPVALAMYMAGVSD 217

Query: 207 KERLRCFGE---NLGIIFQLADDLLDC 230
           ++ L+   +    LG  FQ+ DD LDC
Sbjct: 218 EKDLKQAQDVLIPLGEYFQIQDDYLDC 244


>gi|310287739|ref|YP_003938997.1| Polyprenyl synthetase [Bifidobacterium bifidum S17]
 gi|311064626|ref|YP_003971351.1| polyprenyl synthase IdsA [Bifidobacterium bifidum PRL2010]
 gi|309251675|gb|ADO53423.1| Polyprenyl synthetase [Bifidobacterium bifidum S17]
 gi|310866945|gb|ADP36314.1| IdsA Polyprenyl synthase [Bifidobacterium bifidum PRL2010]
          Length = 365

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 24/176 (13%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT---------AIIAGNGL 123
           L +  AIE     +L+HDD+  +D+  +RRGKP  H      +          I+ G+ L
Sbjct: 86  LDLACAIEVFQTAALVHDDI--IDDSDLRRGKPAAHKALGTTSHSASLGRGLGIMLGDLL 143

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T + +I  +   ++    R  +++S    +  +  +G Q+LD+  E   +DE +    +
Sbjct: 144 ATASVDIAHAAAQRMP---RPDMIVSTFLRMHREVEIG-QVLDLAVELSPLDEPERLARE 199

Query: 182 KM-----KTGALMCFACESGAIMAHASQNEKERLRC--FGENLGIIFQLADDLLDC 230
            M     KT +    A    A++A      +        G  LG  FQLADDLLD 
Sbjct: 200 SMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLPLGQAFQLADDLLDV 255


>gi|269956783|ref|YP_003326572.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305464|gb|ACZ31014.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 365

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 46/216 (21%)

Query: 49  GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK++R+            +         +R GAA+E     +L+HDD+  MD    RRG
Sbjct: 49  GGKRLRAAFAYWSFRAHGGADAGPEREAVVRTGAALELFQAAALLHDDV--MDASDTRRG 106

Query: 104 KPTVH----------------IQYDEVTAIIAGN-GLLTYAFEIISS----PKTQLK--- 139
           +PT H                +++ E  AI+ G+  L+    EI  +    P+ + +   
Sbjct: 107 QPTAHRAFEARHATAGWAGEPVRFGESAAILLGDLCLVATQREIAEALAPLPRERAEAVR 166

Query: 140 ---DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES- 195
              D ++S++++    ++ +Q    G      D   DE +   + + KT     ++    
Sbjct: 167 AAFDTMQSEVIVGQYLDVLVQAEPWG-----LDPHADEERARAVIRAKT---TSYSVRQP 218

Query: 196 ---GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              GA++A A+  +   +   G  LG  FQL DD+L
Sbjct: 219 LVVGALIAGATPAQVAAVAAVGLPLGEAFQLRDDVL 254


>gi|224283386|ref|ZP_03646708.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium bifidum NCIMB 41171]
          Length = 359

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 35/211 (16%)

Query: 49  GGKKIRSFLVTECASLFNV-----------NHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           GGK++R+ L        +                 L +  AIE     +L+HDD+  +D+
Sbjct: 45  GGKRLRALLALHAFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDI--IDD 102

Query: 98  GYIRRGKPTVHIQYDEVT---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
             +RRGKP  H      +          I+ G+ L T + +I  +   ++    R  +++
Sbjct: 103 SDLRRGKPAAHKALGTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMP---RPDMIV 159

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM-----KTGALMCFACESGAIMAH 201
           S    +  +  +G Q+LD+  E   +DE +    + M     KT +    A    A++A 
Sbjct: 160 STFLRMHREVEIG-QVLDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLAS 218

Query: 202 ASQNEKERLRC--FGENLGIIFQLADDLLDC 230
                +        G  LG  FQLADDLLD 
Sbjct: 219 GRDPRRAHADAMAIGLPLGQAFQLADDLLDV 249


>gi|51469024|emb|CAH18006.1| geranylgeranyl diphosphate synthase [Gibberella intermedia]
          Length = 343

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 18/196 (9%)

Query: 41  SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           S   Y L L  K IR   +        V       +   I  +H  SLI DD    DN  
Sbjct: 98  SPYNYILTLPSKGIRGAFIDSLNVWLEVPEDKTSVIKEVIGMLHNSSLIIDDF--QDNSP 155

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKP+ H  +    AI     ++  A E       +++D +    +  +T  I    +
Sbjct: 156 LRRGKPSTHTVFGPAQAINTATYVIVKAIE-------KIQDIVSHDALADVTGMI--TSI 206

Query: 160 LGGQMLDIQ---DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEK--ERLRCF 213
             GQ +D+    +  +   Q +++    KTGAL   + E  A+ + AS ++   E L   
Sbjct: 207 FQGQAMDLWWTANGIVPSIQEYLLMVNDKTGALFRLSLELLALNSEASISDSTLESLSSV 266

Query: 214 GENLGIIFQLADDLLD 229
              LG  FQ+ DD ++
Sbjct: 267 VSLLGQYFQIRDDYMN 282


>gi|320096193|ref|ZP_08027782.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976874|gb|EFW08628.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 364

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 29/160 (18%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFL--VTEC-ASLFNVNHLTALRVGAAIECIHCYSLIH 89
           TQ    L S  R    GGK+ R  L  V  C A    ++      + AA+E     +L H
Sbjct: 33  TQRGAPLASLARSCSEGGKRFRGILAHVGHCLARGGPLDEAPVAPLSAALELYQASALAH 92

Query: 90  DDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISS 133
           DD+  +D+   RRG+PT H+                ++ E  AI+ G+ L ++A   ++ 
Sbjct: 93  DDI--IDHARTRRGRPTPHVSLAALHHDRAWRGDPDRFGEAGAILVGDLLFSWAEAAMAD 150

Query: 134 PKTQL--KDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDE 170
              +L  +D  R     S  H  + L     GQ LD+  E
Sbjct: 151 QADRLAPRDAARLWARYSRMHAEVAL-----GQFLDVAAE 185


>gi|119167462|gb|AAY33489.2| putative mitochondrial isoprenyl diphosphate synthase precursor
           [Megoura viciae]
          Length = 394

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 31/217 (14%)

Query: 39  LLSAIRYALLGGKKIR------SF-LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R      SF ++   A   + N   +  +G  +E +  Y L+ DD
Sbjct: 85  LAKMLQYNVPGGKKNRGLALVLSFKMLASPADQTDENLRLSYILGWCVEILQAYQLVLDD 144

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149
           +  MDN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L 
Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQTIYQLI---KMYFKDKPYYTHILE 198

Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           L +++ ++  +G Q LD+           +++  E    ++ K KT A   F       M
Sbjct: 199 LFYDVAMKTAMG-QCLDMLAANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255

Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
              + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|209570224|emb|CAP74388.1| geranylgeranyl diphosphate synthase [Gibberella intermedia]
          Length = 393

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 18/196 (9%)

Query: 41  SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           S   Y L L  K IR   +       +V    A  +   I+ +H  SLI DD    D   
Sbjct: 98  SPYNYILTLPSKGIRGAFIDSLNVWLDVPEDKAQVIKDVIDMLHNSSLIIDDF--QDGSP 155

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKP+ H  +    AI     ++  A E       ++++ +    +  +T  I    +
Sbjct: 156 LRRGKPSTHTVFGPAQAINTATYIIVKAIE-------RIQEIVSHDALADITGTIT--TI 206

Query: 160 LGGQMLDIQ---DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHA--SQNEKERLRCF 213
             GQ +D+    +  +   Q +++    KTGAL   + E  A+ + A  S +  E L   
Sbjct: 207 FQGQAMDLWWTANTILQSIQEYLLMVNDKTGALFRLSLELLALNSEAPISDSTLESLSSV 266

Query: 214 GENLGIIFQLADDLLD 229
              LG  FQ+ DD ++
Sbjct: 267 VSLLGQYFQIRDDYMN 282


>gi|119476621|ref|ZP_01616931.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143]
 gi|119449877|gb|EAW31113.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143]
          Length = 311

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 14/154 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R+ L         ++    L   AA E +H  SLIHDD+   D    RRG+ ++H 
Sbjct: 34  GKSFRAQLALSSGCSLGLSTTDNLHWAAACELLHNASLIHDDIS--DASTHRRGQESIHQ 91

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +    A+  G+ ++  AFE+ +      +++    ++++L     +Q    GQ+ DI  
Sbjct: 92  HFGADMALCLGDWMVAKAFELGA------RNSQHGSVLVALLAQ-AMQATCSGQIADISQ 144

Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            Q   +DE Q   I   KT  L+       A+ A
Sbjct: 145 RQCAGLDEWQC--IATGKTAPLLIAPIRGAAVAA 176


>gi|50955160|ref|YP_062448.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50951642|gb|AAT89343.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 372

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 26/178 (14%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV--------TAIIAGNGLLTY 126
           V +A+E  H  +L+HDDL  +DN   RRG P+VH +++ +             G G  T 
Sbjct: 86  VASALELFHAAALVHDDL--IDNSDTRRGAPSVHRRFESLHDSEKWSGCGKSFGTGAATL 143

Query: 127 AFEIISSPKTQLKDNIRSQLM-------LSLTHNIGLQGMLGGQMLDIQDEFI-----DE 174
             +++     +L +    Q +            N     +  GQ LD+ +E       D 
Sbjct: 144 LGDLLLILSDELFEEGIGQTVSPAARRAARAEFNRMRIDVTAGQYLDLFEEIGWAGRHDA 203

Query: 175 TQVFMIQKMKTGALMCFACES----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            Q+   +++       ++ ES    GA +A A+  + + L  FG  LGI +QL DDLL
Sbjct: 204 DQLARAERVIVYKSAKYSIESPLLIGASLAGANVGQLDALGGFGLPLGIAYQLRDDLL 261


>gi|158334022|ref|YP_001515194.1| polyprenyl synthetase [Acaryochloris marina MBIC11017]
 gi|158304263|gb|ABW25880.1| polyprenyl synthetase [Acaryochloris marina MBIC11017]
          Length = 298

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 6/184 (3%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L       F      +L+   A+E IH   L+HDD+   DN   R   PT+  
Sbjct: 2   GKGLRPALCMATCQAFGGTEEQSLKSAVALEMIHNAFLVHDDVE--DNSECRHRMPTLQA 59

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLG--GQML 165
           +     A+  G+ +   +  ++      L   +  ++     H +   L+G     G + 
Sbjct: 60  EQGVPIAVNIGDAMNALSLRLVRENIPMLGHQLTQRIYEEFEHLMLKSLEGQASELGWVR 119

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D + +  +   + MI            C  G ++A     + +R   FG  +G  FQ+ D
Sbjct: 120 DNRCDITEADYLQMILNKTCWYSFMHPCRIGGLIASKDTLDLDRFNKFGYFMGAAFQIQD 179

Query: 226 DLLD 229
           D+L+
Sbjct: 180 DVLN 183


>gi|2935459|gb|AAC73051.1| farnesyl pyrophosphate synthase [Solanum lycopersicum]
          Length = 342

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 97/235 (41%), Gaps = 35/235 (14%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRV----- 75
           DLL  TA          +   + Y + GGK  R   V +  SL  +   LTA  +     
Sbjct: 18  DLLEDTAFEFTDDSRKWVDKMLDYNVPGGKLNRGLSVIDSLSLLKDGKELTADEIFKASA 77

Query: 76  -GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL-----TYAFE 129
            G  IE +  Y L+ DD+  MD  + RRG+P  +   ++V  I   +G+L     T   +
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWY-NLEKVGMIAINDGILLRNHITRILK 134

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQ 181
               P++   D      +L L + +  Q    GQM+D+    + E  +          I 
Sbjct: 135 KYFRPESYYVD------LLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLSIHRRIV 187

Query: 182 KMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KT     +   AC    +M   + ++   ++    ++GI FQ+ DD LDC  D
Sbjct: 188 QYKTAYYSFYLPVAC--ALLMVGENLDKHVDVKKILIDMGIYFQVQDDYLDCFAD 240


>gi|3549881|emb|CAA75568.1| geranylgeranyl diphosphate synthase [Gibberella fujikuroi]
          Length = 342

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 18/196 (9%)

Query: 41  SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           S   Y L L  K IR   +        V       +   I  +H  SLI DD    DN  
Sbjct: 98  SPYNYILTLPSKGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLHNSSLIIDDF--QDNSP 155

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKP+ H  +    AI     ++  A E       +++D +    +  +T  I    +
Sbjct: 156 LRRGKPSTHTVFGPAQAINTATYVIVKAIE-------KIQDIVGHDALADVTGTIT--TI 206

Query: 160 LGGQMLDIQ---DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEK--ERLRCF 213
             GQ +D+    +  +   Q +++    KTGAL   + E  A+ + AS ++   E L   
Sbjct: 207 FQGQAMDLWWTANAIVPSIQEYLLMVNDKTGALFRLSLELLALNSEASISDSALESLSSA 266

Query: 214 GENLGIIFQLADDLLD 229
              LG  FQ+ DD ++
Sbjct: 267 VSLLGQYFQIRDDYMN 282


>gi|256831589|ref|YP_003160316.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
 gi|256685120|gb|ACV08013.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
          Length = 345

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 97/252 (38%), Gaps = 50/252 (19%)

Query: 11  ENSKRIDTILDDLLLQTAS------HMQ--------TQHNDRLLSAIRYALLGGKKIRSF 56
           E + R DT L   L  TAS      H Q         Q   RL   +  AL   +K    
Sbjct: 4   EPTTRPDTDLSASLSTTASAAISDFHTQLSQAHGRGRQIRPRLFLEVYAALSHREKHPHL 63

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            VTE   +  V H        AIE +H   LIHDD+  +D+  +RRG   ++  + E+ A
Sbjct: 64  RVTERPEIQQVAH--------AIELLHTSFLIHDDV--IDHDTMRRGHTNINGHF-ELVA 112

Query: 117 IIAG----------------NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           + +G                 G+L     ++           R +L+ +    I L  + 
Sbjct: 113 LSSGASAADAHTLGNTAGILGGVLALTEALMQVAALDFPHRQRQRLLTAFQEAISLSAL- 171

Query: 161 GGQMLDIQDEFIDE----TQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGE 215
            G++LD+    I      T    I ++KT            A+MA  +  +   L   G 
Sbjct: 172 -GELLDVHSATIPAPTPMTDTITIAELKTAEYSFVLPMRLAAMMADDANTDA--LAGVGR 228

Query: 216 NLGIIFQLADDL 227
           +LG+ +QL DDL
Sbjct: 229 HLGVAYQLHDDL 240


>gi|242017538|ref|XP_002429245.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus
           corporis]
 gi|212514134|gb|EEB16507.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus
           corporis]
          Length = 313

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 16/195 (8%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            +++LL   +Y L + GK +R  L         +       +   ++ +H  SL+ DD+ 
Sbjct: 20  QDEKLLQPFKYILQVPGKHMREKLAKAFNYWLKIPSDKLNVIVEIVQILHNSSLLLDDI- 78

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             DN  +RRG P  H  Y   + I A N ++  A E   S        + ++ +L L   
Sbjct: 79  -QDNSVLRRGIPVAHSIYGIPSTINAANYVIFIALEKTLSLDHPNATQVYTEQLLELHRG 137

Query: 154 IGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G++       +  +D F+   E++   +   KTG L   A     +M   S N+ +  +
Sbjct: 138 QGME-------IYWRDNFLCPSESEYKQMTMKKTGGLFMLAVR---LMQLFSDNKSDFSK 187

Query: 212 CFGENLGIIFQLADD 226
             G  +G+IFQ+ DD
Sbjct: 188 IAGI-IGLIFQIRDD 201


>gi|302819273|ref|XP_002991307.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii]
 gi|300140887|gb|EFJ07605.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii]
          Length = 343

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 25/234 (10%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV-NHLT-- 71
           +DT   +LL    +   T+ +   +S  + Y + GGK  R   V +   L    + L+  
Sbjct: 11  VDTTDKELLADCDAFQFTRESREWVSKMLDYNVPGGKLNRGLSVIDSLVLLKSEDELSRD 70

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A  +G  IE +  Y L+ DD+  MDN + RRGKP+   Q +    ++A N  L   
Sbjct: 71  EIEQAFALGWCIEWLQAYFLVMDDI--MDNSHTRRGKPSWFKQPN--VGLVAANDALLLR 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QDEFIDETQVF 178
             +    +           +  L   +  Q   G QMLD+           +++ ET + 
Sbjct: 127 NHVPRILRKYFHGQPYYFDLRELFDEVEYQTACG-QMLDLITSPAGKVDLSKYVMETYLR 185

Query: 179 MIQKMKTGALMCFACESGAI-MAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230
           ++ K KT     +   + A+ M+  S N K E  +     +G  FQ+ DD LDC
Sbjct: 186 IV-KFKTAFYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDC 238


>gi|209525923|ref|ZP_03274457.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
 gi|209493600|gb|EDZ93921.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
          Length = 177

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           R+    E IH  SL+HDD+  +D   +RRG PTVH  ++   A++AG+ L 
Sbjct: 72  RLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLF 120


>gi|183984773|ref|YP_001853064.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum
           M]
 gi|183178099|gb|ACC43209.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum
           M]
          Length = 384

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 44/175 (25%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTY 126
           H ++L+ DD+  MD    RRG P VH+Q                + E  A++ G+  L +
Sbjct: 114 HAFALLQDDV--MDQSPQRRGSPAVHVQLARCHQRRGLSGAAARFGESAAVLLGDICLVW 171

Query: 127 AFEIISSPKTQLK---------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
           A +++     + +         D +R +L +             GQ+ D+ ++  +    
Sbjct: 172 AEQMLRESGVEDRRLRQVWPRYDAMRIELAV-------------GQLCDLSNDIRNLPTL 218

Query: 176 -QVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             V  + + K+G        E GA MA   +   E+L  +G+ +G  FQL DD+L
Sbjct: 219 DAVLDVARRKSGNYTVRRPLEMGAAMADCDERTLEQLARYGDAVGEAFQLRDDML 273


>gi|1146159|gb|AAB07264.1| farnesyl diphosphate synthase short form [Arabidopsis thaliana]
          Length = 343

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 26/214 (12%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRV------GAAIECIHCYSLIH 89
           DR+L    Y + GGK  R   V +   L    N LT   V      G  IE +  Y L+ 
Sbjct: 37  DRMLD---YNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVL 93

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  MDN   RRG+P    +  +V  +   +G+L     I    K   +D      ++ 
Sbjct: 94  DDI--MDNSVTRRGQPC-WFRVPQVGMVAINDGILLRN-HIHRILKKHFRDKPYYVDLVD 149

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCFACESGAIMAH 201
           L + + LQ   G QM+D+   F  E  +          I + KT A   F       +  
Sbjct: 150 LFNEVELQTACG-QMIDLITTFEGEKDLAKYSLSIHRRIVQYKT-AYYSFYLPVACALLM 207

Query: 202 ASQNEKERL--RCFGENLGIIFQLADDLLDCEED 233
           A +N +  +  +    ++GI FQ+ DD LDC  D
Sbjct: 208 AGENLENHIDVKNVLVDMGIYFQVQDDYLDCFAD 241


>gi|15238801|ref|NP_199588.1| FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1);
           dimethylallyltranstransferase/ geranyltranstransferase
           [Arabidopsis thaliana]
 gi|21431776|sp|Q09152|FPPS1_ARATH RecName: Full=Farnesyl pyrophosphate synthase 1, mitochondrial;
           Short=FPP synthase 1; Short=FPS 1; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName:
           Full=Dimethylallyltranstransferase 1; AltName:
           Full=Farnesyl diphosphate synthase 1; AltName:
           Full=Geranyltranstransferase 1; Flags: Precursor
 gi|13878123|gb|AAK44139.1|AF370324_1 putative farnesyl diphosphate synthase precursor [Arabidopsis
           thaliana]
 gi|1872500|gb|AAB49290.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana]
 gi|7275351|gb|AAF44787.1| farnesyl diphosphate synthase long form [Arabidopsis thaliana]
 gi|10177913|dbj|BAB11324.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana]
 gi|17104795|gb|AAL34286.1| putative farnesyl diphosphate synthase precursor [Arabidopsis
           thaliana]
 gi|332008187|gb|AED95570.1| farnesyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 384

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 26/214 (12%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRV------GAAIECIHCYSLIH 89
           DR+L    Y + GGK  R   V +   L    N LT   V      G  IE +  Y L+ 
Sbjct: 78  DRMLD---YNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVL 134

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  MDN   RRG+P    +  +V  +   +G+L     I    K   +D      ++ 
Sbjct: 135 DDI--MDNSVTRRGQPC-WFRVPQVGMVAINDGILLRN-HIHRILKKHFRDKPYYVDLVD 190

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCFACESGAIMAH 201
           L + + LQ   G QM+D+   F  E  +          I + KT A   F       +  
Sbjct: 191 LFNEVELQTACG-QMIDLITTFEGEKDLAKYSLSIHRRIVQYKT-AYYSFYLPVACALLM 248

Query: 202 ASQNEKERL--RCFGENLGIIFQLADDLLDCEED 233
           A +N +  +  +    ++GI FQ+ DD LDC  D
Sbjct: 249 AGENLENHIDVKNVLVDMGIYFQVQDDYLDCFAD 282


>gi|62089112|dbj|BAD93000.1| trans-prenyltransferase variant [Homo sapiens]
          Length = 297

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  +  V A+        E IH  SL+HDD+  +D+   RR
Sbjct: 140 GKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRR 197

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA 127
           GK TV+  + E  A++AG+ +L+ A
Sbjct: 198 GKHTVNKIWGEKKAVLAGDLILSAA 222


>gi|134300028|ref|YP_001113524.1| geranylgeranyl pyrophosphate synthase-like protein
           [Desulfotomaculum reducens MI-1]
 gi|134052728|gb|ABO50699.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Desulfotomaculum reducens MI-1]
          Length = 162

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           N  L SA    + GGK+IR  LV        VN    +++  A+E +H  +L HDD+  +
Sbjct: 41  NHLLGSAHNLIIAGGKRIRPALVLLAGKQGLVNK-QVMQLAIAVEILHLATLTHDDI--I 97

Query: 96  DNGYIRRGKPTVH 108
           DN   RRGKP  H
Sbjct: 98  DNAATRRGKPAAH 110


>gi|54026371|ref|YP_120613.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
 gi|54017879|dbj|BAD59249.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica
           IFM 10152]
          Length = 369

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 48/252 (19%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           +++++++ R+   LDD +  +   H+       L   I   + GGK +RS L     S  
Sbjct: 27  TRMRDDTARV---LDDFVRARRREHLGAPETAVLGQVIGDFVAGGKYLRSALHLAGWSTV 83

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-------------- 111
                 A+R  A+ E +HC++L+ DD+  MD    RRG+P  H+++              
Sbjct: 84  APVGAAAIRAAASAELLHCFALMQDDV--MDESARRRGRPAAHVRFAQWHARQGFSGSSD 141

Query: 112 --DEVTAIIAGNGLLTYAFEIISSPKTQLK---------DNIRSQLMLSLTHNIGLQGML 160
              E  A +A +  L +A +++                 D +RS+L +            
Sbjct: 142 RFGESAATLAADLCLVWAEQLLRESGVDAAALARALPRYDAMRSELAV------------ 189

Query: 161 GGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGEN 216
            GQ  D+ ++         V  + + K+G        E GA +A A       L  +G  
Sbjct: 190 -GQFRDLVNDARRRPALADVLAVARAKSGHYTVRRPLELGAELAGAPPAVLAALGRYGVA 248

Query: 217 LGIIFQLADDLL 228
           +G  FQ+ DDLL
Sbjct: 249 IGEAFQVRDDLL 260


>gi|213407468|ref|XP_002174505.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
           yFS275]
 gi|212002552|gb|EEB08212.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
           yFS275]
          Length = 354

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 36/240 (15%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC------ASLFNVNH 69
           +D I+D L   T+ ++     D    ++ +  LGGK  R   V +        +L + ++
Sbjct: 25  VDEIVDYL---TSVNVPQDAKDWFKKSLYHNTLGGKYNRGLSVIDTYEILSGKALDDNSY 81

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A  +G  IE +  + L+ DD+  MD    RRG+P  ++  +       G+  +  +F 
Sbjct: 82  FRAALLGWCIELLQAFFLVADDM--MDESKTRRGQPCWYLMPN------VGSIAINDSFM 133

Query: 130 IISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQ---------DEFIDETQ 176
           + S+    LK + R +     +L L H +  Q  LG Q LD+           +F  +  
Sbjct: 134 LESAIYFLLKKHFRHETYYVDLLDLFHEVTFQTTLG-QELDLLTAPENHVDLSKFSQDKH 192

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
            F++  +   A   F       M  A+    + L+   +    LG  FQ+ DD LDC  D
Sbjct: 193 AFIV--IFKTAYYSFYLPVALAMCMANVATPDNLQRASDVLIPLGKYFQIQDDYLDCYGD 250


>gi|317013686|gb|ADU81122.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Gambia94/24]
          Length = 307

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 24/168 (14%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +   +E I   SL+HDD+  +D   +RR  P+++  +    A++ G+   + AF  +
Sbjct: 59  AFNLCTIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFEL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKT 185
           S     +   + S  +L L+              +I+D F+      D+ + + I + KT
Sbjct: 117 SKMGESIAQAL-SNAVLRLSRG------------EIEDVFVGECFNSDKQKYWRILEDKT 163

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +  + +S AI+      + +    FG + G+ FQ+ DDLLD  +D
Sbjct: 164 AHFIEASLKSMAILL---DKDAKMYADFGLHFGMAFQIIDDLLDITQD 208


>gi|320531404|ref|ZP_08032371.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320136376|gb|EFW28357.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 386

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 82/239 (34%), Gaps = 46/239 (19%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFL-VTECASLFNVNHLT-------ALRVGAAIECIHCY 85
           Q    LL A    L GGK++R+ L    CA L              A+ +GAA+E     
Sbjct: 35  QAAPELLGAASSVLSGGKRMRAVLGAIGCAILSAPEQRAECLTGSDAVHLGAALELYQAS 94

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDE---------VTAIIAGNGLLTYA--------- 127
           +L+HDDL  MD    RRG P  H  +                  NG +            
Sbjct: 95  ALVHDDL--MDGADTRRGMPAAHRAFTRDHEARGWLGRPQTFGANGAILLGDLLLSLAGE 152

Query: 128 -FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQK 182
               +S  +   +   R+        +     +  GQ LD++ E +    D       ++
Sbjct: 153 EMSALSQSRVSCETGSRTVQYARTAFDAMTTEVALGQFLDVRSENLPLPWDREPGAAARR 212

Query: 183 MKTGALMCFACESG-------------AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           M   AL     ++                    S    E L  FGE++GI FQL DD L
Sbjct: 213 MHDDALSVVRHKAARYSVRHPLLIGALLAGLDPSGPTAEHLAAFGEDVGIAFQLRDDEL 271


>gi|150021241|ref|YP_001306595.1| polyprenyl synthetase [Thermosipho melanesiensis BI429]
 gi|149793762|gb|ABR31210.1| Polyprenyl synthetase [Thermosipho melanesiensis BI429]
          Length = 332

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)

Query: 44  RYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           ++ L  GK+IR  L       F   V+  T  ++ A IE +H + LIHDD+  MD   +R
Sbjct: 40  KFCLRPGKRIRPLLFILGVEGFGGKVDE-TVYKIAATIEIMHSFLLIHDDI--MDQSELR 96

Query: 102 RGKPTVH 108
           RG+P++H
Sbjct: 97  RGQPSMH 103


>gi|13022122|gb|AAK11650.1| unknown [Tolypothrix sp. PCC 7601]
          Length = 69

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           E ID T +  I   KTGAL+  +  SGA++  AS    +RL  +  ++G+ FQ+ D++LD
Sbjct: 4   ENIDITTLDYIHTHKTGALLETSVLSGALLTGASDAVLQRLSVYAHHIGLAFQIVDNVLD 63

Query: 230 C 230
            
Sbjct: 64  I 64


>gi|326773501|ref|ZP_08232784.1| polyprenyl synthetase [Actinomyces viscosus C505]
 gi|326636731|gb|EGE37634.1| polyprenyl synthetase [Actinomyces viscosus C505]
          Length = 364

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 86/244 (35%), Gaps = 56/244 (22%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFL-VTECASLFNVNHLT-------ALRVGAAIECIHCY 85
           Q    LL A    L GGK++R+ L    CA L      +       A+ +GAA+E     
Sbjct: 13  QAAPELLEAAGSVLSGGKRMRAVLGAVGCAILSTPERRSEYLTASDAVHLGAALELYQAS 72

Query: 86  SLIHDDLPSMDNGYIRRGKPTVH------------------------IQYDEVTAIIAGN 121
           +L+HDDL  MD    RRG P  H                        I   ++   +AG 
Sbjct: 73  ALVHDDL--MDGADTRRGLPAAHRVFARDHEDRGWLGRPQTFGANGAILLGDLLLSLAGE 130

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQV 177
            +   A    SS               ++T  + L     GQ LD++ E +    D    
Sbjct: 131 EMSALAPSRTSSQTRGSAVRHARSAFDAMTTEVAL-----GQFLDVRSENLPLPWDREPG 185

Query: 178 FMIQKMKTGALMCFACESG-------------AIMAHASQNEKERLRCFGENLGIIFQLA 224
              + M+  AL     +S                    S    E L  FGE++GI FQL 
Sbjct: 186 AAARLMQGDALSVVRHKSARYSVRHPLLIGALLAGLDPSGATAEHLAAFGEDVGIAFQLR 245

Query: 225 DDLL 228
           DD L
Sbjct: 246 DDEL 249


>gi|294786992|ref|ZP_06752246.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia
           denticolens F0305]
 gi|315226633|ref|ZP_07868421.1| bifunctional short chain isoprenyl diphosphate synthase
           [Parascardovia denticolens DSM 10105]
 gi|294485825|gb|EFG33459.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia
           denticolens F0305]
 gi|315120765|gb|EFT83897.1| bifunctional short chain isoprenyl diphosphate synthase
           [Parascardovia denticolens DSM 10105]
          Length = 371

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 42/226 (18%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDL 92
            D+ LS+ R    GGK++R+ L+        +   +   A+ +  AIE     +L+HDD+
Sbjct: 45  TDQALSSSR----GGKRLRALLLCRTCQALRLPEEDWDAAIDLACAIEIFQTGALVHDDI 100

Query: 93  PSMDNGYIRRGKPTVHI--------------QYDEVTAIIAGNGLLTYAFEII--SSPKT 136
             +D+  +RRG P+ H               Q      ++ G+ L T + ++I  +S + 
Sbjct: 101 --IDDSDLRRGAPSAHKAFASHLLKRSSTARQDGLGLGLMLGDLLATESVDLIQEASSRL 158

Query: 137 QLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFID-------ETQVFMIQKMKTG 186
            + ++++S +M   L++   + +     GQ+LD+  E +D       E         KT 
Sbjct: 159 SVPESLKSVIMTAFLTMHRQVEI-----GQVLDLSMETVDLHDPASIEGGALATYVWKTA 213

Query: 187 ALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDC 230
           +    A    A +A     E   E  +  G  LG+ FQL DDL+D 
Sbjct: 214 SYTTIAPLRIAFLACGLDQETSHEVSQAVGLPLGVAFQLKDDLIDV 259


>gi|126306988|ref|XP_001368888.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1
           [Monodelphis domestica]
          Length = 299

 Score = 45.1 bits (105), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   RY L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKTQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++QK  TG L   A     +M   S N KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-NYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
              + LG+ FQ+ DD
Sbjct: 175 PLLDTLGLFFQIRDD 189


>gi|297805334|ref|XP_002870551.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316387|gb|EFH46810.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 189

 Score = 45.1 bits (105), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%)

Query: 157 QGMLGGQMLDIQDEFIDE-----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +G++ GQ+ D+  E ++       ++ +I   KT AL+  A   G IM   ++ E E+LR
Sbjct: 25  KGLVAGQVTDLSSERLNPHDAGLERLELIHLHKTAALLEEAAILGVIMGDGTEEEIEKLR 84

Query: 212 CFGENLGIIFQLADDLLDCEE 232
            +   + ++FQ+ DD+LD  E
Sbjct: 85  KYARCIRLLFQVVDDILDVTE 105


>gi|149638233|ref|XP_001512343.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1
           [Ornithorhynchus anatinus]
          Length = 301

 Score = 45.1 bits (105), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A   G +   +S   KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYRAMVLQ--KTGGLFGLAV--GLMQLFSSY--KEDLK 174

Query: 212 CFGENLGIIFQLADD 226
              + LG+ FQ+ DD
Sbjct: 175 PLLDTLGLFFQIRDD 189


>gi|297562409|ref|YP_003681383.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846857|gb|ADH68877.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 350

 Score = 45.1 bits (105), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 16/100 (16%)

Query: 46  ALLGGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           AL GGK++R SF      +    +    +R  AA+E +H  +++HDDL  +D   IR G 
Sbjct: 46  ALTGGKRLRASFCYWGWRAAGQPDSDALVRAAAAMELVHAAAVVHDDL--IDESPIRHGV 103

Query: 105 PTVHIQY-------------DEVTAIIAGNGLLTYAFEII 131
           P+ H+                   A++ G+ L+++A E+ 
Sbjct: 104 PSAHVALRAAFTGRPRPHAGSRALALLTGDLLMSWAAELF 143


>gi|325962936|ref|YP_004240842.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469023|gb|ADX72708.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 364

 Score = 45.1 bits (105), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 28/152 (18%)

Query: 39  LLSAIRYALLGGKKIRSFL----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           L+ +I   + GGK++R+ +                + A   GAA+E     +LIHDD+  
Sbjct: 43  LMGSISNLVTGGKRLRALMCYWGWRGAGGEPAAQQIVA--AGAALELFQAAALIHDDI-- 98

Query: 95  MDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQL 138
           +D    RRG P+VH ++ E+                 AI+ G+  L+++ E  +    + 
Sbjct: 99  IDRSDTRRGGPSVHRRFTELHGSRGWALDSERFGQAAAILTGDLCLSFSEEAFTDIGERA 158

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
               R++L+ +L        ++ GQ LDI +E
Sbjct: 159 AAGSRARLIFNLMR----AEVMAGQYLDILEE 186


>gi|330465077|ref|YP_004402820.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
 gi|328808048|gb|AEB42220.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
          Length = 372

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 44/219 (20%)

Query: 47  LLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           L GGK++R    +     A+  +      L   A +E +H ++L+HDD+  MD+   RRG
Sbjct: 62  LAGGKRVRPTFGYWGWRGAASGDEPLHRVLPALATLELLHTFALVHDDV--MDHSATRRG 119

Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRS 144
           +PT H+                ++ E  A++ G+  L +A ++++    P ++L D  R 
Sbjct: 120 RPTAHVAMAAQHAAAGRCGDSGRFGEAVAVLIGDLCLVWADQLLARAALPASRLLDVRRG 179

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGA------LMCFACE 194
              + +         + GQ LDI  E   E     +   + + KT +      L+  A  
Sbjct: 180 YDRMRVE-------TIAGQYLDILGEADPENWSVDRALRVARYKTASYTVQRPLLFGASL 232

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +G        +   R   +G  +G  FQL DDLL    D
Sbjct: 233 AGVDGGTPLTDAYTR---YGLAVGEAFQLRDDLLGVYGD 268


>gi|13021724|gb|AAK11531.1| PaxG [Penicillium paxilli]
          Length = 371

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 21/237 (8%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
           G P  L ++SK   TI    +L+     +  Q+N  +   + Y L + GK IRS L+   
Sbjct: 40  GFPRLLSDSSKAPSTIRTVQVLEDDVDDIAIQYNKIVRGPLDYLLAIPGKDIRSKLIDSF 99

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                +       V   I  +H  SL+ DD+   D   +RRGKP  H  Y     I + N
Sbjct: 100 NIWLQLPEEKLSIVKDIINLLHTASLLIDDI--QDASRLRRGKPVAHDVYGVAQTINSAN 157

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFI--DETQV 177
               YA+ +  +   ++ D    ++      ++ L     GQ +D+  +D  +   E + 
Sbjct: 158 ----YAYYLQQARLKEIGDPRAFEIFTRSLLDLHL-----GQGMDLYWRDMVVCPTEEEY 208

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             +   KTG L   A +   I +  + +         E LG+IFQ+ DD ++ +  L
Sbjct: 209 TRMVMYKTGGLFNLALDLMRIQSRKNTD----FSKLVELLGVIFQIRDDYMNLQSGL 261


>gi|328717612|ref|XP_001950423.2| PREDICTED: farnesyl pyrophosphate synthase-like [Acyrthosiphon
           pisum]
          Length = 396

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 27/214 (12%)

Query: 37  DRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLTA--LRV----GAAIECIHCYSLIH 89
           + L + ++Y + GGK  R   LVT    L   + LT   LR+    G  +E +  Y L+ 
Sbjct: 85  EWLENLLKYNVPGGKNNRGLTLVTSFKMLSTPSDLTYENLRLSYILGWCVEILQAYQLVL 144

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  MDN   RRG+P  + +++++  +   +G+L     I    K   KD      ++ 
Sbjct: 145 DDI--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQ-AIYQLLKKYFKDKPYYTHIVE 200

Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           L +++ ++  +G Q LD+           ++F  +  + ++ K KT A   F       M
Sbjct: 201 LFYDVTMKSAMG-QCLDMLTAKSFKSTKLEKFTMDNYIAIV-KYKT-AYYSFFLPVFLAM 257

Query: 200 AHASQNEKE---RLRCFGENLGIIFQLADDLLDC 230
              + N++E   + +     +G  FQ+ DD LDC
Sbjct: 258 RMTNINDQEIFKQSKAILLEMGQFFQVQDDYLDC 291


>gi|302809182|ref|XP_002986284.1| hypothetical protein SELMODRAFT_425252 [Selaginella moellendorffii]
 gi|300145820|gb|EFJ12493.1| hypothetical protein SELMODRAFT_425252 [Selaginella moellendorffii]
          Length = 267

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%)

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           + TA R     E      L  DDLP MDN   R+G+   H+++D+ TAI+A   L   AF
Sbjct: 132 YATAQRTKKHFEMWMAIILTTDDLPCMDNARTRKGRAAAHVEFDDTTAILAAQALAALAF 191

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             +      L D    +L L    ++ +Q ++ GQ  D++   +  T+    Q+ + G L
Sbjct: 192 GRVVDSTLVLADK---RLRLVKKFSLSMQRLVYGQYDDVKKGEVGNTRGTQRQEHQQGEL 248

Query: 189 MCFAC 193
           +  A 
Sbjct: 249 LLRAA 253


>gi|291243150|ref|XP_002741463.1| PREDICTED: geranylgeranyl diphosphate synthase 1-like [Saccoglossus
           kowalevskii]
          Length = 310

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 21/182 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  L        N+       +G  ++ +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 36  GKEIRMKLTQGFNHWLNIPEEKLHVIGEVVQMLHNASLLIDDIE--DNSKLRRGIPVAHN 93

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            Y     I   N +   A + + +        + ++ +LSL           GQ +DI  
Sbjct: 94  IYGIPHTINCANYVFFLALQKLLNLNNAQVTQVYTEQLLSLHE---------GQGMDIWW 144

Query: 168 QDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +D ++   +E    M+ K KTG L         +M   S+N K   +   ENLG+ FQ+ 
Sbjct: 145 RDAYVCPTEEEYKDMVIK-KTGGLFGLGIR---LMQIFSEN-KCDFKPLWENLGLYFQIR 199

Query: 225 DD 226
           DD
Sbjct: 200 DD 201


>gi|145609303|ref|XP_001409359.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15]
 gi|145016690|gb|EDK01120.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15]
          Length = 728

 Score = 44.7 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           K +RS L+ +C +L+  V   +   +   I+C+H  SLI DD+   D   +RRG P  HI
Sbjct: 434 KNMRSQLM-DCFNLWLEVPQPSLAAIKETIDCLHHSSLILDDIE--DGSDLRRGLPAAHI 490

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    AI +   L   A   +++         R Q+M    H+  L  +  GQ  D+  
Sbjct: 491 VYGVGQAINSATHLHVQA---VANMHAMASREGRPQMMDVFLHH--LNQLFIGQSWDLHW 545

Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHAS-----QNEKERLRCFGENLGI 219
            F      +E  + MI + KTGA++    E     A A+     ++ K  L  F    G 
Sbjct: 546 TFHRRCPTEEKYLNMIDQ-KTGAMLQMLLELMQTAAAAAKQGVLKDGKHLLWEFTRLFGR 604

Query: 220 IFQLADDLLD 229
            FQ+ DD ++
Sbjct: 605 FFQVRDDYMN 614


>gi|26376318|dbj|BAB28153.2| unnamed protein product [Mus musculus]
 gi|220941794|emb|CAX15883.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus]
          Length = 280

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   A   N++H  A  + A+        E IH  +L+HDD+  +D+   RR
Sbjct: 127 GKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRR 184

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYA 127
           GK TV+  + E  A++AG+ +L+ A
Sbjct: 185 GKHTVNKIWGEKKAVLAGDLILSAA 209


>gi|328860517|gb|EGG09623.1| hypothetical protein MELLADRAFT_47465 [Melampsora larici-populina
           98AG31]
          Length = 366

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 10/186 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + GK+IRS ++        V       +   +  +H  SL+ DD+   D+  +RRG P  
Sbjct: 74  IPGKEIRSMMIDAFNHWLQVPRPALEIIKKIVGQLHTASLLMDDV--EDDSDLRRGVPVT 131

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  Y     I   N +   A++ ++  K  L+ +  + L  SL ++  LQ +  GQ +D+
Sbjct: 132 HKIYGIPQTINTANYVYFLAYQELTKLKPCLRSDATTDLW-SLVNDELLQ-LHRGQGMDL 189

Query: 168 --QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             +D     T+   +Q +  KTG L   A +   ++A +   E          +GIIFQ+
Sbjct: 190 YWRDSLTCPTEEEYLQMVNNKTGGLFRIAIK--LMIALSPIPETPDYLPLVNLVGIIFQI 247

Query: 224 ADDLLD 229
            DDLL+
Sbjct: 248 RDDLLN 253


>gi|150865549|ref|XP_001384814.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS
           6054]
 gi|149386805|gb|ABN66785.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS
           6054]
          Length = 347

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 23/173 (13%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  I   H  SL+ DD+   D+   RRG P  H +Y     I  GN +   A +     
Sbjct: 67  IGDIISIFHNASLLIDDIE--DSSEYRRGFPAAHTKYGIPLTINCGNLMYFVALQKAQIT 124

Query: 135 KTQLKDNIRSQLMLSL------THNIGLQGMLG---GQMLDI-QDEFIDETQ-------- 176
             +L  ++ S L + +      T  I +  ML    GQ LDI   +++ ETQ        
Sbjct: 125 LPRLYSDLNSDLEIDIDKLKFETSQILIDEMLNLHHGQGLDIYWRDYLPETQESLPSVQD 184

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              + K KTG L   + +   ++A  S+ E   L      LGII+Q+ DD L+
Sbjct: 185 YLSMVKDKTGGLFRLSIK---LLALFSKRETTDLIPIANLLGIIYQVRDDYLN 234


>gi|125977318|ref|XP_001352692.1| GA21189 [Drosophila pseudoobscura pseudoobscura]
 gi|195174424|ref|XP_002027974.1| GL21354 [Drosophila persimilis]
 gi|54641441|gb|EAL30191.1| GA21189 [Drosophila pseudoobscura pseudoobscura]
 gi|194115684|gb|EDW37727.1| GL21354 [Drosophila persimilis]
          Length = 339

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 29/208 (13%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPAEKLAQIGDIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQLLGHPEAT 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 125 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 175 MQLFSAN-KEDYSKLTAILGLYFQIRDD 201


>gi|119167460|gb|AAY33488.2| putative mitochondrial isoprenyl diphosphate synthase precursor
           [Aphis fabae]
          Length = 394

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 29/216 (13%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R   +     + +        N   +  +G  +E +  Y L+ DD
Sbjct: 85  LAKVLQYNVPGGKKNRGLALVPSFKMLSSPSDQTDENLRLSYILGWCVEILQAYQLVLDD 144

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149
           +  MDN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L 
Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYYVHILE 198

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVF---------MIQKMKTGALMCFACESGAIMA 200
           L +++ ++  +G Q LD+      +T+            I K KT A   F       M 
Sbjct: 199 LFYDVTMKTSMG-QCLDMLTANSFKTKKLEKYTMENYTAIVKYKT-AYYSFFLPVCLAMR 256

Query: 201 HASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
             + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 257 MTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|330469324|ref|YP_004407067.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
 gi|328812295|gb|AEB46467.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
          Length = 342

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 56/241 (23%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVG 76
           T LDD L+  A  ++            + L GGK++R +F          V+    +   
Sbjct: 17  TDLDDALVPVAEAIEA-----------FVLGGGKRLRPAFAYWGYRGAGGVDTDAVVTAL 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAG 120
           AA+E +   +LIHDDL  MD    RRG+P VH +                + +  AI+ G
Sbjct: 66  AALEFVQASALIHDDL--MDRSDTRRGEPAVHRRFAARHRAAGWGGNPDGFGDAAAILLG 123

Query: 121 NGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           +  L ++ E++ S    P+T  +     D +R+++ +             GQ LD+  + 
Sbjct: 124 DLCLVWSDELLHSAGLDPRTVARARPDFDEMRTEVTV-------------GQYLDVVTQA 170

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR----CFGENLGIIFQLADDL 227
             +  +    K+       +  E   ++  A  +    +R     +G  LG  FQL DD+
Sbjct: 171 TGDASLERASKIARYKSAKYTVERPLLLGAALADAPADIRVAYSAYGLPLGEAFQLRDDV 230

Query: 228 L 228
           L
Sbjct: 231 L 231


>gi|414611|emb|CAA53433.1| dimethylallyltransferase [Arabidopsis thaliana]
          Length = 343

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 26/214 (12%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRV------GAAIECIHCYSLIH 89
           DR+L    Y + GGK  R   V +   L    N LT   V      G  IE +  Y L+ 
Sbjct: 37  DRMLD---YNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVL 93

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  MDN   RRG+P    +  +V  +   +G+L     I    K   +D      ++ 
Sbjct: 94  DDI--MDNSVTRRGQPC-WFRVPQVGMVAINDGILLRN-HIHRILKKHFRDKPYYVDLVD 149

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAIMAH 201
           L + + LQ   G QM+D+   F  E  +          I + KT A   F       +  
Sbjct: 150 LFNEVELQTACG-QMIDLITTFEGEKDLSKYSLSIHRRIVQHKT-AYYSFYLPVACALLM 207

Query: 202 ASQNEKERL--RCFGENLGIIFQLADDLLDCEED 233
           A +N +  +  +    ++GI FQ+ DD LDC  D
Sbjct: 208 AGENLENHIDVKNVLVDMGIYFQVQDDYLDCFAD 241


>gi|71005854|ref|XP_757593.1| hypothetical protein UM01446.1 [Ustilago maydis 521]
 gi|46097004|gb|EAK82237.1| hypothetical protein UM01446.1 [Ustilago maydis 521]
          Length = 399

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 45/255 (17%)

Query: 11  ENSKRIDTILDDLLLQ-----TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           +  KR +++   L+ +     T+  M  +  D     + Y   GGK  R   V +   + 
Sbjct: 93  QKRKRFESVFPLLVEELTAYLTSEKMPAEAIDWFRRNLDYNTPGGKLNRGLSVVDTVEIL 152

Query: 66  ---------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
                             +L A  +G  IE +  Y L+ DD+  MD    RRG+P  +  
Sbjct: 153 LCTDSDTGKISRELTEPEYLKAAILGWCIELLQAYFLVADDM--MDASVTRRGQPCWY-- 208

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLD 166
              V  +  GN  +  AF + ++    LK + RS     ++L L H++  Q  LG Q++D
Sbjct: 209 --RVEGV--GNIAINDAFMLEAAIYFLLKKHFRSDPYYGMLLELFHDVTFQTELG-QLID 263

Query: 167 I---QDEFIDETQVFMIQK-----MKTGALMCFACESGAIMAHASQNEKERLRCFGE--- 215
           +    ++ +D ++ F +QK     +   A   F       M  A   ++   +   +   
Sbjct: 264 LITAPEDSVDLSK-FSLQKHHLIVVYKTAFYSFYLPVALAMRMAGVTDETLYKQALDILL 322

Query: 216 NLGIIFQLADDLLDC 230
            +G  FQ+ DD LDC
Sbjct: 323 PMGEYFQVQDDFLDC 337


>gi|209870011|ref|NP_001119633.3| mitochondrial isoprenyl diphosphate synthase [Acyrthosiphon pisum]
          Length = 394

 Score = 44.7 bits (104), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 27/215 (12%)

Query: 39  LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R         +++  A   + N   +  +G  +E +  Y L+ DD
Sbjct: 85  LAKLLQYNVPGGKKNRGLALVLSYKMLSSPADQTDENIRLSYILGWCVEILQAYQLVLDD 144

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MDN   RRG+P  + +++++  +   +G+L     I    K   KD      +L L 
Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQ-SIYQLIKKYFKDKPYYTHILELF 200

Query: 152 HNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +++ ++  +G Q LD+           +++  E    ++ K KT A   F       M  
Sbjct: 201 YDVTMKTSMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAMRM 257

Query: 202 ASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
            + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 258 TNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|254672305|emb|CBA05414.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275]
          Length = 171

 Score = 44.7 bits (104), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 45  GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEII 131
             +    A++ G+ L T AF+++
Sbjct: 103 NLFGNAAAVLVGDFLYTRAFQLM 125


>gi|260945739|ref|XP_002617167.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238849021|gb|EEQ38485.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 374

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 24  LLQTASHMQTQHN------DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--- 74
           L+Q    +  Q+N      D     + Y   GGK  R   V +   +     L  L    
Sbjct: 41  LVQELKEILVQYNMPQEAIDWFTKNLNYNTPGGKLNRGLSVIDTYCILKNKSLADLSQEE 100

Query: 75  ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +G AIE +  Y L+ DD+  MD    RRG+P  ++    V  +  GN  +  +F
Sbjct: 101 YKKVAILGWAIELLQAYFLVADDM--MDQSKTRRGQPCWYL----VEGV--GNIAINDSF 152

Query: 129 EIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181
            +  +    LK + R       +L L H +  Q  LG Q+LD+    +E +D  + F + 
Sbjct: 153 MLEGAIYVLLKKHFRQDPYYVDLLDLFHEVTFQTELG-QLLDLVTADEEHVDLDK-FSLA 210

Query: 182 K------MKTG--------ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K       KT         AL  F C         S+ + +++R     LG  FQ+ DD 
Sbjct: 211 KHSFIVIFKTAYYSFYLPVALAMFMC------GINSEQDLKQVRDILIPLGEYFQIQDDY 264

Query: 228 LDC 230
           LDC
Sbjct: 265 LDC 267


>gi|302812450|ref|XP_002987912.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii]
 gi|300144301|gb|EFJ10986.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii]
          Length = 374

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 33/238 (13%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV-NHLT-- 71
            D I  +LL    +   T+ +   +S  + Y + GGK  R   V +   L    + L+  
Sbjct: 42  FDKIKKELLADCDAFQFTRESREWVSKMLDYNVPGGKLNRGLSVIDSLVLLKSEDELSRD 101

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A  +G  IE +  Y L+ DD+  MD+ + RRGKP+   Q +    ++A N  L   
Sbjct: 102 EIEQAFALGWCIEWLQAYFLVMDDI--MDDSHTRRGKPSWFKQPN--VGLVAANDALLLR 157

Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI---------QDEFIDE 174
             +   P+  L+     QL    +  L   +  Q   G QMLD+           +++ E
Sbjct: 158 NHV---PRI-LRKYFHGQLYYFDLRELFDEVEYQTACG-QMLDLITSPAGKVDLSKYVME 212

Query: 175 TQVFMIQKMKTGALMCFACESGAI-MAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230
           T + ++ K KT     +   + A+ M+  S N K E  +     +G  FQ+ DD LDC
Sbjct: 213 TYLRIV-KFKTAFYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDC 269


>gi|282935089|gb|ACT79809.3| mitochondrial farnesyl diphosphate synthase [Aphis gossypii]
          Length = 394

 Score = 44.3 bits (103), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 31/217 (14%)

Query: 39  LLSAIRYALLGGKKIR------SF-LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R      SF +++  +   + N   +  +G  +E +  Y L+ DD
Sbjct: 85  LAKVLQYNVPGGKKNRGLALVLSFKMLSSPSDQTDENLRLSYILGWCVEILQAYQLVLDD 144

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149
           +  MDN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L 
Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYYVHILE 198

Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           L +++ ++  +G Q LD+           +++  E    ++ K KT A   F       M
Sbjct: 199 LFYDVTMKTSMG-QCLDMLTANSFKTKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255

Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
              + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|304406152|ref|ZP_07387809.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344736|gb|EFM10573.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 304

 Score = 44.3 bits (103), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-QYDEVTAIIAGNGLLTYAFEIISSP 134
            AA+E +     I+DDL   DN       P V   Q D   A+    GL + + ++I + 
Sbjct: 65  AAAVELMILALDIYDDLQDKDN-------PKVPWSQIDPAIALNVAIGLQSLSMDLILTV 117

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  +R+   L    N G+   + GQ  D+++E + E +   + + K+G+L+  AC 
Sbjct: 118 PGPSDRKLRAATYL----NQGVLRAVNGQHTDLRNEPMTEEECLQMIEEKSGSLVAAACL 173

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            GA  A A+    E +  +G  +GI  QL +D+
Sbjct: 174 VGA--ALATDEHAELIGAYGRAIGIAAQLRNDV 204


>gi|7648574|gb|AAF65590.1|AF139916_11 GGPP synthase [Brevibacterium linens]
          Length = 385

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 29/214 (13%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  ++ +   GGK IR  ++ +  A+L   +   A+    A++ +H   +IHDD+  +D
Sbjct: 70  QLWDSLTHMATGGKLIRPRMLLDAHAALGGRDEHAAVDAACAMQLLHIALVIHDDV--ID 127

Query: 97  NGYIRRGKPTVHIQYDE-----------------VTAIIAGNGLLTYAFEIISSPKTQLK 139
           N  IRRG+ T+  ++                    T+I+ G+ +LT +  +++  +  ++
Sbjct: 128 NDTIRRGEATISGEFASEAMSRGALRRDANAWGIATSILGGDLILTLSHSLLA--RLDIE 185

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQKMKTGALMCFACE-- 194
           D  R + +L +  +  ++   G      L +  E  +   V  +   KT A+  F     
Sbjct: 186 DTKR-RAILDIFDDTVVESAAGEHSDVWLSLHLEGANSPDVLAMVDQKT-AVYSFQAPLL 243

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             A++A A     + L      +G+I+QL DD+L
Sbjct: 244 IAAVLAGADSGLIDDLANISRQIGVIYQLRDDVL 277


>gi|50355631|dbj|BAD29970.1| geranylgeranyldiphosphate synthase [Phoma betae]
          Length = 343

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 19/181 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L+        V   +   +G  +  +H  SL+ DD+   DN  +RRGKP    
Sbjct: 68  GKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASLLIDDI--QDNSELRRGKPVAQN 125

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +     I + N +   A E ++S K     +I ++ +L L           GQ +D+  
Sbjct: 126 IFGTALTINSANYVYFLALEKLNSLKNPNITDIFTEELLRLHR---------GQAMDLYW 176

Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D      E + F +    TG L          M +A  +    L    E LG+IFQ+ D
Sbjct: 177 RDTLTCPTEEEYFEMVANMTGGLFWLMYR----MMNAESSMPIDLLPVVELLGVIFQVLD 232

Query: 226 D 226
           D
Sbjct: 233 D 233


>gi|323356561|ref|YP_004222957.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
 gi|323272932|dbj|BAJ73077.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
          Length = 363

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 49/260 (18%)

Query: 6   PSKLQENSKRIDTILDDLLLQTAS-HMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECAS 63
           P  ++  S+R+D  L D L   +S   + +   R  +A   +L GGK++R+ F +T   +
Sbjct: 5   PEPIEAVSQRLDKFLSDQLSYASSLGPEAETMSRAGAA---SLRGGKRLRARFCLTGWRA 61

Query: 64  LFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------ 110
           +        +   AA       +E     +L+HDD+  +DN   RRG+P  H        
Sbjct: 62  VAESTAARTVAPAAAAISVAAALEIFQAAALVHDDI--IDNSDTRRGQPAAHRALEAAHA 119

Query: 111 ----------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL---Q 157
                     +    A++ G+ L+ ++ ++       L+D +  Q   S T  +     +
Sbjct: 120 AAHWAGDAAMFGRSGAVLLGDLLVAWSDDL-------LEDALADQPTASATRRLYAHMRR 172

Query: 158 GMLGGQMLDIQDE-----FIDETQVFMIQKMKTGALMCFAC----ESGAIMAHASQNEKE 208
            +  GQ LD+ +E     + D+       ++ +     ++     E GA +A A  ++ +
Sbjct: 173 DVTIGQFLDVAEESAYAVYPDDQHAERALRVASYKSARYSIQKPLEIGAALAGADDDQLD 232

Query: 209 RLRCFGENLGIIFQLADDLL 228
            L  FG ++G+ FQL DD+L
Sbjct: 233 ALARFGHDVGMAFQLRDDVL 252


>gi|75233327|sp|Q7XYT0|FPPS2_ARTSI RecName: Full=Farnesyl diphosphate synthase 2; Includes: RecName:
           Full=Dimethylallyltranstransferase; Includes: RecName:
           Full=(2E,6E)-farnesyl diphosphate synthase
 gi|32329197|gb|AAP74719.1| farnesyl diphosphate synthase [Artemisia spiciformis]
          Length = 342

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 44/241 (18%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
           D++  DL+   A        + +   + Y + GGK  R   V +   L     LT     
Sbjct: 14  DSLKSDLIHDPAFEFDDDSRNWVERMLDYNVPGGKLNRGLSVVDSYKLLKQEELTEDEVF 73

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I   +G++     I
Sbjct: 74  LACALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAVNDGVVLRN-HI 129

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQK 182
               K   +       +L L + +  Q    GQM+D+      + ++          I K
Sbjct: 130 PRILKKHFRGKAYYADLLDLFNEVEFQTA-SGQMIDLITTLFGQKELSKYSLSTHQRIVK 188

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENL-------------GIIFQLADDLLD 229
            KT     +   + A++             FGENL             G  FQ+ DD LD
Sbjct: 189 FKTAYYSFYLPVACALLM------------FGENLDDHVQVKDVLVEMGTYFQVQDDYLD 236

Query: 230 C 230
           C
Sbjct: 237 C 237


>gi|25452946|sp|O24242|FPPS2_PARAR RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase
           2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 2; AltName:
           Full=Dimethylallyltranstransferase 2; AltName:
           Full=Farnesyl diphosphate synthase 2; AltName:
           Full=Geranyltranstransferase 2
 gi|1532052|emb|CAA57893.1| farnesyl diphosphate synthase [Parthenium argentatum]
          Length = 342

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 28/233 (12%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
           DT+  +L+   A          +   + Y + GGK  R   V +   L     LT     
Sbjct: 14  DTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVIDSYQLLKGGKLTDDEIF 73

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  +E +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G++      
Sbjct: 74  HASALGWCVEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAANDGIILRN--- 127

Query: 131 ISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------- 179
              P+  LK + R +     ++ L + +  Q    GQM+D+    + E  +         
Sbjct: 128 -HVPRI-LKKHFRGKPYYVDLVDLFNEVEFQ-TASGQMIDLITTLVGEKDLSKYSLSIHR 184

Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
            I + KT     +   + A++      EK   ++     +G  FQ+ DD LDC
Sbjct: 185 RIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMGTYFQVQDDYLDC 237


>gi|75233326|sp|Q7XYS9|FPPS1_ARTSI RecName: Full=Farnesyl diphosphate synthase 1; Includes: RecName:
           Full=Dimethylallyltranstransferase; Includes: RecName:
           Full=(2E,6E)-farnesyl diphosphate synthase
 gi|32329199|gb|AAP74720.1| farnesyl diphosphate synthase [Artemisia spiciformis]
          Length = 346

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
           K  DT+  DL+   A          +   + Y + GGK  R   V +   L     L+  
Sbjct: 15  KVYDTLKSDLINDPAFEFDDDSRQWIQKMLDYNVPGGKLNRGLSVVDSYQLLKGGELSDD 74

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +  +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G+L   
Sbjct: 75  EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAANDGILLRN 131

Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---- 179
                 P+  LK + R +     ++ L + +  Q    GQM+D+    + E  +      
Sbjct: 132 ----HVPRI-LKKHFRGKPYYVDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLS 185

Query: 180 ----IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
               I + KT     +   + A++      +K   ++     +G  FQ+ DD LDC
Sbjct: 186 IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDC 241


>gi|325111161|ref|YP_004272229.1| hypothetical protein Plabr_4636 [Planctomyces brasiliensis DSM
           5305]
 gi|324971429|gb|ADY62207.1| protein of unknown function DUF116 [Planctomyces brasiliensis DSM
           5305]
          Length = 623

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 22/204 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--------------ALRVGA-AIECIHCYSLIHDDLP 93
           GGK+ R F+        N    T              A++  A AIE  H  SL+HDD+ 
Sbjct: 297 GGKRFRPFITLAAWDARNGGDATRKDPSSNEPLEVPDAVKKAAIAIEAFHKASLVHDDI- 355

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLT 151
             D+   R G+ T+H Q+    AI  G+ L+   + +++           S ++  +SL 
Sbjct: 356 -QDDDEYRYGEETLHRQHGVGIAINVGDYLIGMGYRLLAECHVADDPMAVSDIVQRMSLA 414

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQV--FMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           H I L    G +M    +  ++ T +    I  +KT      A  SG  +        E 
Sbjct: 415 H-IKLCEGQGAEMEWTANPSLNLTPLDAMQIYALKTSPAFEAALYSGLRLGGDVSEYDEM 473

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  F  +LG+ FQ+ +DL D   D
Sbjct: 474 VSTFCRHLGVGFQILNDLKDWRGD 497


>gi|257877744|ref|ZP_05657397.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20]
 gi|257811910|gb|EEV40730.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20]
          Length = 177

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 49  GGKKIR-SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R ++ +   A   + +   A+ + A+IE +H  SLIHDD+  +D+   RR  PT+
Sbjct: 46  GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEMLHTASLIHDDI--VDHADTRRKLPTI 103

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             ++    A+ AG+ L    F++++   + +K
Sbjct: 104 RSEFGNDVAVYAGDYLFVCCFKLMADYASSMK 135


>gi|254729448|gb|ACT79808.1| mitochondrial farnesyl diphosphate synthase [Aphis gossypii]
          Length = 394

 Score = 44.3 bits (103), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 29/216 (13%)

Query: 39  LLSAIRYALLGGKKIR------SF-LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R      SF +++  +   + N   +  +G  +E +  Y L+ DD
Sbjct: 85  LAKVLQYNVPGGKKNRGLALVLSFKMLSSPSDQTDENLRLSYILGWCVEILQAYQLVLDD 144

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149
           +  MDN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L 
Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYYVHILE 198

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVF---------MIQKMKTGALMCFACESGAIMA 200
           L +++ ++  +G Q LD+      +T+            I K KT A   F       M 
Sbjct: 199 LFYDVTMKTSMG-QCLDMLTANSFKTKKLEKYTMENYTAIVKYKT-AYYSFFLPVCLAMR 256

Query: 201 HASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
             + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 257 MTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|15608129|ref|NP_215504.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv]
 gi|148660770|ref|YP_001282293.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis
           H37Ra]
 gi|2052123|emb|CAB08149.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL
           PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis
           H37Rv]
 gi|148504922|gb|ABQ72731.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis
           H37Ra]
          Length = 325

 Score = 44.3 bits (103), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 49  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 217 RDIIAISGD 225


>gi|311742815|ref|ZP_07716623.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272]
 gi|311313495|gb|EFQ83404.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272]
          Length = 362

 Score = 44.3 bits (103), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 47/218 (21%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT--------ALRVGA-AIECIHCYSLIHDDLPSMDNGY 99
           GGK++R      C + + V   T        A+ V A ++E +   +L+HDDL  MD   
Sbjct: 49  GGKRLRPAF---CLAGWRVATATPDDTPVPEAVAVAAGSLEWLQGSALVHDDL--MDGSD 103

Query: 100 IRRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISS------PKTQ 137
            RRG+P+VH  +++                 TA++ G+ +L++  E++ S      P T 
Sbjct: 104 TRRGRPSVHRDFEQRHRREAMVGDPAGFGAATAVLMGDLMLSWCDEMLRSAGHRPGPFTG 163

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACE 194
                R      +  ++    ++ GQ LD+ ++   E+   +  ++ + K      +  E
Sbjct: 164 ADGAARLARAFEVL-DVCKTEVVAGQFLDVVNQTRPESSAAEAMLVVRYKAAK---YTVE 219

Query: 195 S----GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                GA +    Q     L      LG  FQL DD+L
Sbjct: 220 RPLHLGATLGGGDQALMAGLSAVALPLGEAFQLRDDVL 257


>gi|308231691|ref|ZP_07413460.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu001]
 gi|308378784|ref|ZP_07483890.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu010]
 gi|308379930|ref|ZP_07488129.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu011]
 gi|308397859|ref|ZP_07492630.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu012]
 gi|308216330|gb|EFO75729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu001]
 gi|308359223|gb|EFP48074.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu010]
 gi|308363135|gb|EFP51986.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu011]
 gi|308366792|gb|EFP55643.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu012]
          Length = 333

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 57  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 114

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 115 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 164

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 165 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 224

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 225 RDIIAISGD 233


>gi|254231286|ref|ZP_04924613.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           C]
 gi|124600345|gb|EAY59355.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           C]
          Length = 333

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 57  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 114

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 115 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 164

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 165 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 224

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 225 RDIIAISGD 233


>gi|31792180|ref|NP_854673.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97]
 gi|121636916|ref|YP_977139.1| putative polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148822198|ref|YP_001286952.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           F11]
 gi|215429849|ref|ZP_03427768.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           EAS054]
 gi|215445137|ref|ZP_03431889.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T85]
 gi|218752659|ref|ZP_03531455.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           GM 1503]
 gi|224989388|ref|YP_002644075.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253799983|ref|YP_003032984.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 1435]
 gi|254363907|ref|ZP_04979953.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254549973|ref|ZP_05140420.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260200016|ref|ZP_05767507.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T46]
 gi|289442409|ref|ZP_06432153.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T46]
 gi|289555229|ref|ZP_06444439.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 605]
 gi|289749517|ref|ZP_06508895.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T92]
 gi|289753047|ref|ZP_06512425.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           EAS054]
 gi|289757072|ref|ZP_06516450.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T85]
 gi|289761123|ref|ZP_06520501.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           GM 1503]
 gi|297633514|ref|ZP_06951294.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 4207]
 gi|297730499|ref|ZP_06959617.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN R506]
 gi|313657828|ref|ZP_07814708.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN V2475]
 gi|31617768|emb|CAD93877.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL
           PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis
           AF2122/97]
 gi|121492563|emb|CAL71031.1| Probable polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|134149421|gb|EBA41466.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148720725|gb|ABR05350.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           F11]
 gi|224772501|dbj|BAH25307.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253321486|gb|ACT26089.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 1435]
 gi|289415328|gb|EFD12568.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T46]
 gi|289439861|gb|EFD22354.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 605]
 gi|289690104|gb|EFD57533.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T92]
 gi|289693634|gb|EFD61063.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           EAS054]
 gi|289708629|gb|EFD72645.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           GM 1503]
 gi|289712636|gb|EFD76648.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T85]
 gi|326904785|gb|EGE51718.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           W-148]
 gi|328459725|gb|AEB05148.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 4207]
          Length = 325

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 49  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 217 RDIIAISGD 225


>gi|308370103|ref|ZP_07420299.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu002]
 gi|308370565|ref|ZP_07422005.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu003]
 gi|308371822|ref|ZP_07426360.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu004]
 gi|308372989|ref|ZP_07430673.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu005]
 gi|308374160|ref|ZP_07435075.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu006]
 gi|308375313|ref|ZP_07443508.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu007]
 gi|308376574|ref|ZP_07439328.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu008]
 gi|308377573|ref|ZP_07479700.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu009]
 gi|308325351|gb|EFP14202.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu002]
 gi|308331528|gb|EFP20379.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu003]
 gi|308335332|gb|EFP24183.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu004]
 gi|308339139|gb|EFP27990.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu005]
 gi|308342810|gb|EFP31661.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu006]
 gi|308346663|gb|EFP35514.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu007]
 gi|308350578|gb|EFP39429.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu008]
 gi|308355269|gb|EFP44120.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu009]
          Length = 333

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 57  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 114

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 115 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 164

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 165 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 224

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 225 RDIIAISGD 233


>gi|254672306|emb|CBA05417.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275]
          Length = 186

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+++I +  I E Q   + + KT  L   A + GAI+  AS   +  L+ +G  +G  FQ
Sbjct: 13  QLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQ 72

Query: 223 LADDLLD 229
           + DD+LD
Sbjct: 73  IIDDVLD 79


>gi|215402805|ref|ZP_03414986.1| polyprenyl synthetase [Mycobacterium tuberculosis 02_1987]
          Length = 331

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 55  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 113 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 162

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 163 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 222

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 223 RDIIAISGD 231


>gi|25027199|ref|NP_737253.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
           YS-314]
 gi|259506664|ref|ZP_05749566.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
           YS-314]
 gi|23492480|dbj|BAC17453.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
           YS-314]
 gi|259165748|gb|EEW50302.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
           YS-314]
          Length = 374

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 35/214 (16%)

Query: 46  ALLGGKKIRSFLV-------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD-- 96
           AL GGK +R  ++       T  A+    N   AL++  A E +H   L+HDD+   D  
Sbjct: 55  ALRGGKLVRPRMLLGTHRTMTADATAGTANREAALQIAVATELLHFAFLVHDDVIDGDLY 114

Query: 97  -----------------NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
                            + +  RG    H+ +     I+ GN  L    ++ +  +  L 
Sbjct: 115 RRGKLNFIGQILKQRDPDNFSDRGPDPEHLHWACSNGILIGNLFLAATHQVFA--RVDLP 172

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMC-FACE 194
              R +L+  L H   +   L G+ LD+    +    D +    + ++KT          
Sbjct: 173 HPTRLRLLDLLDHT--MNDSLVGEFLDVGLSSRAITPDISTALEMSRLKTATYTFELPLR 230

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           + AI+A  S+ +++++   G +LG  +QL DD L
Sbjct: 231 AAAILAGLSEEDEQKVGVIGTHLGTAYQLQDDYL 264


>gi|215426267|ref|ZP_03424186.1| polyprenyl synthetase [Mycobacterium tuberculosis T92]
          Length = 331

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 55  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 113 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 162

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 163 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 222

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 223 RDIIAISGD 231


>gi|196013707|ref|XP_002116714.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens]
 gi|190580692|gb|EDV20773.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens]
          Length = 352

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 41/249 (16%)

Query: 18  TILDDLLLQTASHMQTQ--HNDRLLSAIRYA-------LLGGKKIRSFLVTECASLF--- 65
           T+ D L  Q  + +      ND+ + AI++        + GGK+ R   V   A L    
Sbjct: 15  TLFDQLFPQLVTELTEDGLANDQTVDAIQWMKKSLECNVPGGKRNRGLSVIATARLLVAP 74

Query: 66  ----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               + +   AL +G  +E +  + L+ DD+  MD+   RRG+P    +  E+  I   +
Sbjct: 75  QELSDEDIKGALILGWCVEFLQAFFLVADDI--MDDSVTRRGQP-CWFRNPEIGTIAIND 131

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
                +F I S     LK   RSQ     +L L H       +G Q LD+     ++D +
Sbjct: 132 -----SFMIESCIYKLLKKYFRSQPYYADLLDLMHETTYDTEVG-QTLDLITAPSYVDFS 185

Query: 176 QVFMIQKMKT-----GALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDL 227
           + F I++ +       A+  F       M     N +   +  R     +G  FQ+ DD 
Sbjct: 186 R-FSIERYRAIVKYKTAIYSFYLPVALAMTMTKNNSEVDYQDARQVLMQMGEYFQIQDDF 244

Query: 228 LDCEEDLPK 236
           LDC  D PK
Sbjct: 245 LDCFGD-PK 252


>gi|289744725|ref|ZP_06504103.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           02_1987]
 gi|289685253|gb|EFD52741.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           02_1987]
          Length = 325

 Score = 43.9 bits (102), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 49  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 217 RDIIAISGD 225


>gi|149247108|ref|XP_001527979.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447933|gb|EDK42321.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 504

 Score = 43.9 bits (102), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 30/47 (63%)

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KT +LM  +C + A+++ A  +  E    FG NLG+ FQ+ DD+LD
Sbjct: 354 LKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLD 400



 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           R+   +E IH  SL+HDD+  +D    RRG+P+ ++ +    A++AG+ LL  A
Sbjct: 186 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNVAFTNKMAVLAGDFLLGRA 237


>gi|167968055|ref|ZP_02550332.1| polyprenyl synthetase [Mycobacterium tuberculosis H37Ra]
          Length = 331

 Score = 43.9 bits (102), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 55  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 112

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 113 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 162

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 163 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 222

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 223 RDIIAISGD 231


>gi|110776978|ref|XP_001122899.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like, partial
           [Apis mellifera]
          Length = 310

 Score = 43.9 bits (102), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 87/218 (39%), Gaps = 36/218 (16%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + ++ LL    Y L + GK+IR+ L         +       +G  I+ +H  SL+ DD+
Sbjct: 16  EEDEILLEPYNYILQVPGKQIRATLAHAFNYWLKIKSDKLRDIGDIIQLLHNASLLIDDI 75

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   + + A N  +  A E +                L+L H
Sbjct: 76  --QDNSVLRRGIPVAHNIYGVASTMNAANYAIFIALEKV----------------LALNH 117

Query: 153 NIGLQGML-------GGQMLDI--QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAH 201
             G+Q  L        GQ ++I  +D +I  T+    Q    KTG L   A     + + 
Sbjct: 118 VEGIQIYLEQLLELHRGQGMEIYWRDNYICPTEAAYKQMTIQKTGGLFNLAVRLMQLFSE 177

Query: 202 ASQNEKERLRCFGENLGIIFQLADDL--LDCEEDLPKK 237
                KE        LG+ FQ+ DD   L  EE +  K
Sbjct: 178 C----KEDFVPLTSILGLYFQIRDDYCNLSSEEYVDNK 211


>gi|302781879|ref|XP_002972713.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii]
 gi|300159314|gb|EFJ25934.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii]
          Length = 363

 Score = 43.9 bits (102), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 32/249 (12%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTEC 61
           G   +K  +   R+     +L+  + S   T  +   +S  + Y + GGK  R   V + 
Sbjct: 21  GSFKAKFMDAYHRLKK---ELITDSESFSHTFESREWVSKMLDYNVPGGKLNRGLSVVDS 77

Query: 62  ASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L              A  +G  IE +  Y L+ DD+  MD+ + RRG+P    Q  +V
Sbjct: 78  LVLLRSGEELSEDELFLAFALGWCIEWLQAYFLVLDDI--MDDSHTRRGQPCWFRQ-PKV 134

Query: 115 TAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QD 169
             I A +G+L   +   I++       D    Q +  L   +  Q   G QMLD+     
Sbjct: 135 GLIAANDGILLRNHISRILTR---HFHDKPYYQDLRELFDEVEYQTACG-QMLDLITTPP 190

Query: 170 EFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIF 221
             +D ++  M     I K KT A   F       +  + +++K +          +G  F
Sbjct: 191 GEVDLSKYVMDTYLRIVKYKT-AYYSFYLPVACALYMSGEDDKSKFESAERILVQMGTYF 249

Query: 222 QLADDLLDC 230
           Q+ DD LDC
Sbjct: 250 QIQDDYLDC 258


>gi|6899844|dbj|BAA90525.1| geranylgeranyl diphosphate synthase [Nigrospora sphaerica]
          Length = 392

 Score = 43.9 bits (102), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 19/181 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IRS ++    +   V       +  A+  +H  SL+ DD+   DN  +RRG+P  H 
Sbjct: 117 GKEIRSLMLACFNAWLEVPAQRLEVIKRAVGMLHTASLLIDDI--QDNSELRRGRPVAHK 174

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +     I + N +   A + +++ +T    +I +  +L L           GQ +D+  
Sbjct: 175 IFGPAMTINSANHMYFLALQELNALETPGVVDIFTDELLRLHR---------GQAMDLYW 225

Query: 170 EFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                   E   F +   KTG L   A      +  A       L    E LG++FQ+AD
Sbjct: 226 RETLTCPTEADYFEMTSNKTGGLFRLAYR----LMKAESAVSVDLMPVVELLGVLFQVAD 281

Query: 226 D 226
           D
Sbjct: 282 D 282


>gi|227875512|ref|ZP_03993652.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC
           35243]
 gi|306818821|ref|ZP_07452543.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239]
 gi|227843848|gb|EEJ54017.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC
           35243]
 gi|304648507|gb|EFM45810.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239]
          Length = 360

 Score = 43.9 bits (102), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 31/206 (15%)

Query: 47  LLGGKKIRSF--LVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           LL GK+ R+    +   AS   V+       L +G  +E     +++HDD+  +D   IR
Sbjct: 47  LLRGKRFRAIGAYIGWIASGGTVSPQIPGCLLDLGTCLELFQASAIVHDDI--IDEARIR 104

Query: 102 RGKPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           RG P+  I           ++ E  AI+ G+ L   A    +S    L D+ R Q +  L
Sbjct: 105 RGLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFAAANSYFASAVKGL-DSARLQALGQL 163

Query: 151 THNIGLQGMLG-GQMLDIQDEFID---------ETQVFMIQKMKTGALMCFACESGAIMA 200
              + +Q  +  GQ LD+  E  D         E+ + +I+       +      GA +A
Sbjct: 164 Y--VTMQAEVAYGQYLDLFAESRDLTADVPPSKESAMEVIRHKTARYSVVIPILIGAALA 221

Query: 201 HASQNEKERLRCFGENLGIIFQLADD 226
            A+ +   +L  F   LGI +QL DD
Sbjct: 222 GATPDLLAKLEDFSTPLGIAYQLRDD 247


>gi|119953112|ref|YP_945322.1| dimethylallyltransferase [Borrelia turicatae 91E135]
 gi|119861883|gb|AAX17651.1| dimethylallyltransferase [Borrelia turicatae 91E135]
          Length = 348

 Score = 43.9 bits (102), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 28/198 (14%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK+IR  L+   A     N        ++   +E  H  SLI DD+   D    RRGKP
Sbjct: 57  GGKRIRPMLMILLAYALGYNKKNTENLYKLSMLLELPHSGSLIIDDIE--DGAIKRRGKP 114

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQM 164
            +H+ Y    +I   N +     ++I + K +     +SQ L++       L  +  GQ 
Sbjct: 115 AIHLIYGLDNSINTANLIYFLPAKLIQTSKLK-----KSQKLLIYENFFTTLSNLHLGQG 169

Query: 165 LDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +DI           DE+I       + ++KT  L   A     I+ +     K     F 
Sbjct: 170 IDIALHNGTYIPNLDEYIS------LVELKTSCLFGMAGFLAGILTNNESKAKNLYNTFL 223

Query: 215 ENLGIIFQLADDLLDCEE 232
           + LG  FQ+ DD+ + ++
Sbjct: 224 K-LGTCFQIIDDIKNIKD 240


>gi|134100861|ref|YP_001106522.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291003525|ref|ZP_06561498.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133913484|emb|CAM03597.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 337

 Score = 43.9 bits (102), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 88/185 (47%), Gaps = 15/185 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  LV   A     N   A+   AA+E +H +SL+HDDL   D    RR +PT  
Sbjct: 52  GGKALRPALVLLSAQAVAPNGAQAVPAAAAVELVHNFSLLHDDLLDGDTS--RRHRPTAW 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++AG+ LL  A E++    +   D I S   L       ++ ++ GQ  D+ 
Sbjct: 110 TVFGRPAALLAGDALLGLATEVLLDSTS--GDAIASARALC----AAVRSLIAGQNADLD 163

Query: 169 -----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                D  +DE     +   KT AL+  +   GA+   A +   ERL  FG  LG+ FQL
Sbjct: 164 FEHRADVTLDE--CLHMADEKTSALLACSTSIGALHVGAPRETVERLHAFGSELGMAFQL 221

Query: 224 ADDLL 228
            DDLL
Sbjct: 222 VDDLL 226


>gi|255943955|ref|XP_002562745.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587480|emb|CAP85515.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 372

 Score = 43.9 bits (102), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)

Query: 33  TQHNDRLLSA-IRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           T+  ++++SA + Y L + GK IR  L++      ++       V   I+ +H  SL+ D
Sbjct: 71  TEPYEKIVSAPLEYLLCIPGKDIRGKLISAFNEWLHLPDDKLAIVKEVIDRLHTASLLID 130

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQL 146
           D+   D   +RRG P  H  +     I A N    YA+ +      ++ D    +I +Q 
Sbjct: 131 DI--QDASRLRRGHPVAHDVFGVAQTINAAN----YAYFLQQKRLNEINDPRAFHIFTQA 184

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +L L  +IG QGM     L  +D  +   E +   +   KTG L   A E   +M   S 
Sbjct: 185 LLDL--HIG-QGM----DLYWRDALVCPTEAEYTRMVMYKTGGLFRLAVE---LMQIQST 234

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
              +  R  G  LGIIFQ+ DD ++ +
Sbjct: 235 TTTDLSRLVGL-LGIIFQIRDDYMNLQ 260


>gi|167519034|ref|XP_001743857.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777819|gb|EDQ91435.1| predicted protein [Monosiga brevicollis MX1]
          Length = 346

 Score = 43.9 bits (102), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 89/226 (39%), Gaps = 53/226 (23%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALR------------VGAAIECIHCYSLIHD 90
           + Y   GGK  R   V     L    HL A R            +G  IE +  + L+ D
Sbjct: 42  LEYNCPGGKMNRGLSV-----LTTFRHLVAPREPTDQEIEQCNILGWCIEWLQAFFLVAD 96

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS------ 144
           D+  MD    RRG+P  + Q  E    +A N     +F I ++    LK + +S      
Sbjct: 97  DI--MDGSVTRRGQPCWYKQ--ENVGTVAIND----SFLIEAAIYKLLKKHFKSTPVYVD 148

Query: 145 --QLMLSLTHNIGLQGMLGGQMLD---------IQDEFIDETQVFMIQKMKTGALMCFAC 193
             +LML  T+   L     GQ+LD         + D F  E    ++ K KT A   F  
Sbjct: 149 LLELMLETTYQTEL-----GQLLDLITAPEDQVVLDRFTIEKHTNIV-KYKT-AFYSFYL 201

Query: 194 ESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDCEEDLPK 236
                M  A   +++      +    +GI FQ+ DD LDC  D PK
Sbjct: 202 PVAMAMLLAGVKDEQAFANAKDILLEMGIFFQVQDDYLDCYGD-PK 246


>gi|62858985|ref|NP_001017122.1| geranylgeranyl diphosphate synthase 1 [Xenopus (Silurana)
           tropicalis]
 gi|89273784|emb|CAJ82104.1| ggps1 [Xenopus (Silurana) tropicalis]
 gi|111309089|gb|AAI21538.1| hypothetical protein LOC549876 [Xenopus (Silurana) tropicalis]
          Length = 296

 Score = 43.9 bits (102), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK+IR+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +       ++ +Q +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPNAVHVFTQQLLELHR----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +      E +  ++Q  KTG L   A     +M   S  +K+ L+
Sbjct: 125 ----GQGLDIYWRDTYTCPTEAEYKAMVLQ--KTGGLFGLAV---GLMQLFSSYDKD-LK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|215410588|ref|ZP_03419396.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           94_M4241A]
 gi|298524483|ref|ZP_07011892.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|298494277|gb|EFI29571.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 325

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 49  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 217 RDIIAISGD 225


>gi|254572275|ref|XP_002493247.1| Geranylgeranyl diphosphate synthase, increases the intracellular
           pool of geranylgeranyl diphosphate [Pichia pastoris
           GS115]
 gi|238033045|emb|CAY71068.1| Geranylgeranyl diphosphate synthase, increases the intracellular
           pool of geranylgeranyl diphosphate [Pichia pastoris
           GS115]
 gi|328352737|emb|CCA39135.1| hypothetical protein PP7435_Chr3-0163 [Pichia pastoris CBS 7435]
          Length = 336

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 23/194 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R  L+        V+H +   +   I+ +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 31  GKHFRRILIDLFNEFLEVDHQSVESIEQVIDILHNSSLMVDDVE--DSATLRRGIPATHN 88

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLD 166
            +     I   N    Y + +       L ++ R        +++ ++ M+    GQ LD
Sbjct: 89  VFGIPQTINTAN----YMYFVAIQKAGTLGNHAR-------VNDVLIEEMMNLHRGQGLD 137

Query: 167 I--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS---QNEKERLRCFGENLGI 219
           +  +D F+   E Q   +   KTG L         ++ + +   + +   L  F   LGI
Sbjct: 138 LYWRDNFVCPSEEQYLDMVMNKTGGLFRLTVRLMELVQNPNDGVERKASSLVHFANLLGI 197

Query: 220 IFQLADDLLDCEED 233
           ++Q+ DD L+ + D
Sbjct: 198 VYQIRDDYLNLKSD 211


>gi|255075269|ref|XP_002501309.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299]
 gi|226516573|gb|ACO62567.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299]
          Length = 342

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 82/219 (37%), Gaps = 33/219 (15%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHD 90
           D +   + Y +  GK  R   V +     N   ++      A+ VG  IE +    L+ D
Sbjct: 34  DWIDKMVEYNVPHGKLNRGLAVVDGMRALNPAGVSDDQMHRAMVVGWCIEWLQAAFLVWD 93

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MD    RRG+P      +    ++A N  L    +I S  K   K +     +L +
Sbjct: 94  DI--MDESVTRRGQPCWF--RNPKVEMVAINDGLVLECQIYSMLKKHCKAHAGYAELLEM 149

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET-------QVFMIQKMKTGALMCFACESGAIM---- 199
            H I  +    GQ+LD+    I E        + +M       A   F   + A M    
Sbjct: 150 FHEITYK-TASGQLLDLITAPIGEVDLSKYTEEAYMRIVTYKTAYYTFYLPAAAAMHLSG 208

Query: 200 -----AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                A A  NE        E LG  FQ+ DD LDC  D
Sbjct: 209 VTDPAAFAKANE------ICEKLGQFFQIQDDYLDCYGD 241


>gi|70887563|ref|NP_001020642.1| farnesyl pyrophosphate synthase [Danio rerio]
 gi|66911345|gb|AAH97112.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase)
           [Danio rerio]
 gi|182891376|gb|AAI64398.1| Fdps protein [Danio rerio]
          Length = 356

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)

Query: 37  DRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIH 89
           +RL   ++Y   GGK+ R   ++     L + + L       AL VG  IE +  + L+ 
Sbjct: 46  NRLREVLQYNAPGGKRNRGLSVIGSLRELVSPSELPTEEVHRALLVGWCIELLQAFFLVA 105

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146
           DD+  MD+   RRG+P  + +  E   + A N     AF +  S    L+ + R Q    
Sbjct: 106 DDI--MDSSVTRRGQPCWYKK--EAIGLDAIND----AFLLEGSIYRLLRRHCRGQPYYV 157

Query: 147 -MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM-----IQKMKTGALMCFACESGA 197
            +L L      Q  LG Q LD+       ID  +  M     I K KT     +   + A
Sbjct: 158 HLLELFTETSFQTELG-QALDLMTAPPHKIDLNRFTMERYKAIVKYKTAFYSFYLPVAAA 216

Query: 198 IMAHASQNEKER--LRCFGENLGIIFQLADDLLDC 230
           +     +NE E    +     +G  FQ+ DD LDC
Sbjct: 217 MYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDC 251


>gi|53733369|gb|AAH83515.1| Fdps protein [Danio rerio]
          Length = 359

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 30/215 (13%)

Query: 37  DRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIH 89
           +RL   ++Y   GGK+ R   ++     L + + L       AL VG  IE +  + L+ 
Sbjct: 49  NRLREVLQYNAPGGKRNRGLSVIGSLRELVSPSELPTEEVHRALLVGWCIELLQAFFLVA 108

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146
           DD+  MD+   RRG+P  + +  E   + A N     AF +  S    L+ + R Q    
Sbjct: 109 DDI--MDSSVTRRGQPCWYKK--EAIGLDAIND----AFLLEGSIYRLLRRHCRGQPYYV 160

Query: 147 -MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM-----IQKMKTGALMCFACESGA 197
            +L L      Q  LG Q LD+       ID  +  M     I K KT     +   + A
Sbjct: 161 HLLELFTETSFQTELG-QALDLMTAPPHKIDLNRFTMERYKAIVKYKTAFYSFYLPVAAA 219

Query: 198 IMAHASQNEKER--LRCFGENLGIIFQLADDLLDC 230
           +     +NE E    +     +G  FQ+ DD LDC
Sbjct: 220 MYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDC 254


>gi|256074738|ref|XP_002573680.1| geranylgeranyl pyrophosphate synthase [Schistosoma mansoni]
 gi|238658865|emb|CAZ29912.1| geranylgeranyl pyrophosphate synthase, putative [Schistosoma
           mansoni]
          Length = 338

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 19/182 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IRS LV        V       +   I+ +H  SLI DD+   D  ++RRGKPT H
Sbjct: 29  NGKGIRSALVAAFNYWLKVPESILRVISDVIQMLHNASLIIDDIE--DGSHLRRGKPTAH 86

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             +    +I + N     A E +S  +      I ++ ML L           GQ +DI 
Sbjct: 87  CIFGVAPSINSANYAYFLALEKLSLLERPETVKIFTEQMLVLHR---------GQGMDIF 137

Query: 168 -QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +  F    E++   +   KTG L         +M   S+N+ +  +   + +G+ +Q+ 
Sbjct: 138 WRSSFKCPSESEYEAMVLCKTGGLFSLGVR---LMQLFSENQTD-YKPLLDAIGLFYQIR 193

Query: 225 DD 226
           DD
Sbjct: 194 DD 195


>gi|300705868|ref|XP_002995273.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01]
 gi|239604252|gb|EEQ81602.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01]
          Length = 301

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 23/209 (11%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +++LS I Y  +GGK  R+ L     S  N   L +L+     E +    ++ DD+  MD
Sbjct: 22  NKILSFITYNTVGGKGYRAELFNLIISDINSTEL-SLKTSCVYELLQSAFIVADDV--MD 78

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGL--LTYAFEIISSPKTQLK----DNIRSQLMLSL 150
              IRRG          V       GL  L YA  +IS+    L+    +N RS L  + 
Sbjct: 79  ESLIRRG----------VECYYRKKGLICLKYAQYLISALGKYLRMVRGENERSPLRATY 128

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKE 208
            +N  L   LG Q+LD + +  +E  V +  ++     A+  F     +    + + E  
Sbjct: 129 -YNCILDTCLG-QILDSKKKSKEEYSVELYNRIIEYKTAIYTFYLPLVSGYLFSGRKEPS 186

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPKK 237
            L  + + +G+IFQ+ DD L+   +L KK
Sbjct: 187 CLYEYCKIIGMIFQMQDDYLNFFPELSKK 215


>gi|239917873|ref|YP_002957431.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|239839080|gb|ACS30877.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
          Length = 373

 Score = 43.5 bits (101), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 30/153 (19%)

Query: 39  LLSAIRYALLGGKKIRSFLVT--ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L+ AI     GGK++R+ L      A+            GAA E     +LIHDD+  +D
Sbjct: 49  LVDAIADLTAGGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LD 106

Query: 97  NGYIRRGKPTVHIQYDEV----------------TAIIAGN---GLLTYAFEIISSPKTQ 137
               RRG P+VH +++ +                 AI+AG+   G+   AF  + +  T 
Sbjct: 107 RSDTRRGMPSVHRRFESLHREAGWRHAAEHFGVSAAILAGDVALGMSETAFARVLA-GTP 165

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
            +D  R++L           G++ GQ LD+  E
Sbjct: 166 REDRARAELARMRF------GVMAGQYLDVVAE 192


>gi|78191063|gb|ABB29856.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 234

 Score = 43.5 bits (101), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 22/175 (12%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G  IE +  Y L+ DD+  MDN + RRG+P  + +  +V  I   +G+L     + 
Sbjct: 2   ASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53

Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDE---------TQVF 178
           +     LK++ R++     +L L + +  Q    GQM+D+    + E         T   
Sbjct: 54  NHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPTHRR 112

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++Q                +MA  + ++   ++     +GI FQ+ DD LDC  D
Sbjct: 113 IVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFAD 167


>gi|164661701|ref|XP_001731973.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966]
 gi|159105874|gb|EDP44759.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966]
          Length = 450

 Score = 43.5 bits (101), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 60/213 (28%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T  R+    E IH  SL+HDD+  +D   +RRG P+    +    +I+ G+ LL  A   
Sbjct: 137 TQQRLAEITEMIHVASLLHDDV--IDASPLRRGAPSAPSTFGNKLSILGGDFLLGRASIA 194

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV------------- 177
           ++    +L+D   ++LM ++  N+    ++  +  D +   + + Q              
Sbjct: 195 LA----RLRDPEVTELMSTVIANLVEGEVMQLKATDSEQVPVTDVQSARPSNEVMERFWF 250

Query: 178 ----------------------FMIQK--MKTGALMCFACESGAIMA--------HASQN 205
                                 F +QK  +KT +L+  +  S  ++          +   
Sbjct: 251 AYDQGSSSAMSTPGAPNALLFEFYLQKTYLKTASLIAKSARSATVLGGCGTWSNQQSDMT 310

Query: 206 EKERLRC---------FGENLGIIFQLADDLLD 229
            ++R            FG N+GI FQL DD+LD
Sbjct: 311 PQQRADAATVCDAAYTFGRNVGIAFQLVDDMLD 343


>gi|50302727|ref|XP_451300.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1346032|sp|P49349|FPPS_KLULA RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|453166|emb|CAA53614.1| Farnesyldiphosphatesynthetase [Kluyveromyces lactis]
 gi|49640431|emb|CAH02888.1| KLLA0A06732p [Kluyveromyces lactis]
 gi|1092509|prf||2024223A farnesyl diphosphate synthase
          Length = 349

 Score = 43.5 bits (101), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 33/210 (15%)

Query: 37  DRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +R LS +  YALL G K  S L  E        +     +G  IE +  Y L+ DD+  M
Sbjct: 50  NRGLSVVDTYALLKGYKSVSELSAE-------EYKKVAILGWCIELLQAYFLVADDM--M 100

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLT 151
           D    RRG+P  +    +V  +  G+  +  AF +  +    LK + R++     +L L 
Sbjct: 101 DQSITRRGQPCWY----KVENV--GDIAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELF 154

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMCFACESGAIMAHAS 203
           H++  Q  LG Q+LD+     D+  +  F ++K       KT A   F       M  A 
Sbjct: 155 HDVTFQTELG-QLLDLITAPEDKVDLSKFSLEKHSFIVIFKT-AYYSFYLAVALAMFAAG 212

Query: 204 QNEKERLRCFGE---NLGIIFQLADDLLDC 230
             + + L+   +    LG  FQ+ DD LDC
Sbjct: 213 ITDSKDLKQASDVLIPLGEYFQIQDDFLDC 242


>gi|255715471|ref|XP_002554017.1| KLTH0E12430p [Lachancea thermotolerans]
 gi|238935399|emb|CAR23580.1| KLTH0E12430p [Lachancea thermotolerans]
          Length = 326

 Score = 43.5 bits (101), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 12/215 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV-NHLTALRVGAAIEC 81
           L   A H  ++    L     Y     GK  R+ L+    S + + +H  A+ +   +E 
Sbjct: 11  LANEAPHWTSEEESNLRRPFDYLTSSPGKNFRAELIQIFNSFYELPDHRIAI-ISKLVET 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SL+ DD+   D+   RRG    H+ Y     I   N +  YA E +        D 
Sbjct: 70  LHTSSLLIDDIE--DSSEWRRGLKAAHLVYGVPMTINTANYMYFYAMECLKELGNGCDDL 127

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKM--KTGALMCFACESGA 197
             ++L+  +  N  +  +  GQ LDI  +D F+  T+   +  +  KTG L         
Sbjct: 128 SLNKLL--IIFNEEMMDLHRGQGLDIYWRDCFMVPTEPEYLNMVMNKTGGLFRLTVRLME 185

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + + +    K  L      LGI++Q+ DD ++ ++
Sbjct: 186 VFSPSFSGAKS-LVPLSNLLGILYQIRDDFMNLQD 219


>gi|320006988|gb|ADW01838.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 351

 Score = 43.5 bits (101), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 31/242 (12%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRS-FLVTECASLF 65
           + E  +R+D +L   + + A          D +   +  +   GK++R+ F      +  
Sbjct: 8   MAEFKERVDDVLRVFVAREAERFAAVDPVLDPVAGQLESSAAHGKRLRAAFCYWGWRATG 67

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-------------IQYD 112
             +  + +R  A++E +H  +++HDDL  +D+  +R G PT H             +   
Sbjct: 68  QPDDESLVRAAASMELVHAAAVVHDDL--IDDSPLRHGLPTAHMALRGAARGRPRSVSAG 125

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDE 170
              A++ G+ L+  A ++ ++         R++ + S       + ++ G+ L+I     
Sbjct: 126 RSLAMLVGDLLMGLAGQLFATSGLPAAYLARARPLWSALA----RDLIAGECLEILRTGA 181

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR----CFGENLGIIFQLADD 226
             D      + + KT     +  E   ++  A     ER+R     +G  LG  FQL DD
Sbjct: 182 APDTADSLKVIRYKTAK---YTVEQPLLIGGALAGAGERVRSGYSAYGLPLGEAFQLRDD 238

Query: 227 LL 228
           L+
Sbjct: 239 LV 240


>gi|184201140|ref|YP_001855347.1| polyprenyl synthase [Kocuria rhizophila DC2201]
 gi|183581370|dbj|BAG29841.1| polyprenyl synthase [Kocuria rhizophila DC2201]
          Length = 370

 Score = 43.5 bits (101), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 35/220 (15%)

Query: 38  RLLSAIRYALLGGKKIRSFL--VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           RL+ A+     GGK++R+ L      A+         +   A++E     +LIHDD+  +
Sbjct: 46  RLVDAVGQLTEGGKRLRARLCHWGWRAAGGEAGSDVVVAAAASLELFQTAALIHDDI--L 103

Query: 96  DNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIISSPKTQL- 138
           D    RRG+P+VH  ++ +                 A++ G+  L++A ++ +    ++ 
Sbjct: 104 DRSDTRRGRPSVHRVFEALHRESGWAADPAHFGVSAAVLTGDMSLSFAEQLFADAAARVA 163

Query: 139 -KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES-- 195
            +   R++ + S         ++ GQ LDI  E          Q  +   ++ +      
Sbjct: 164 PQAGARAREIFSTMRT----EVMAGQYLDIHAEVAPPAAEPARQLERAMTVLRYKSAKYS 219

Query: 196 -------GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                  GA +A A +        F   LG  FQL DD+L
Sbjct: 220 VEHPVAIGAALAGADEAFLRACAAFTLPLGEAFQLRDDVL 259


>gi|299115584|emb|CBN75787.1| Farnesyl pyrophosphate synthase [Ectocarpus siliculosus]
          Length = 499

 Score = 43.5 bits (101), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 25/214 (11%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAAIECIHCYSL 87
           D +   + Y   GGK  R   V +    F   +   LR         +G  +E +  + L
Sbjct: 187 DWIQENLEYNTKGGKMNRGMGVVDVLRAFAEANGRELRHEEVCRGSILGWCVEWLQAFFL 246

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+  MD    RRG+P  + +  +V  I   +  +  A       +    +N   QL 
Sbjct: 247 VADDV--MDRSLTRRGQPCWY-KVPKVQEIAINDSFILEAHVFKMLKRHFAHENYYLQL- 302

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFID---------ETQVFMIQKMKTGALMCF-ACESGA 197
           + L H++  +  +G Q+LD+  + +D           +  MI + KT     +  C  G 
Sbjct: 303 VELFHDVTYRTEMG-QLLDLTSQPMDAPSDLTRFTPVRYRMIVRYKTAYYTFYLPCAIGM 361

Query: 198 IMAHASQNEKERL-RCFGENLGIIFQLADDLLDC 230
           I A        RL R     +G  FQ+ DD LDC
Sbjct: 362 IYAGVKDPASYRLARDICCRIGEFFQIQDDYLDC 395


>gi|260185898|ref|ZP_05763372.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289446570|ref|ZP_06436314.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289419528|gb|EFD16729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           CPHL_A]
          Length = 325

 Score = 43.5 bits (101), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 49  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG     Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 107 NTRWTNNFAILAGG----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 217 RDIIAISGD 225


>gi|320168042|gb|EFW44941.1| geranylgeranyl pyrophosphate synthetase [Capsaspora owczarzaki ATCC
           30864]
          Length = 314

 Score = 43.5 bits (101), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 20/203 (9%)

Query: 34  QHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q    LL    Y   + GK++R+ L+       ++       +   ++ +H  SL+ DD+
Sbjct: 5   QQQKTLLEPYTYLTSVPGKEVRTILIRAFDQWMHIPTKELDEIKGIVQMLHSASLLIDDI 64

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H+ Y   + I   N     A E +      LK N + + + + T 
Sbjct: 65  --EDNSKLRRGVPVAHLIYGVPSTINCANYAYFLALERV------LKLN-KPEAVAAFTE 115

Query: 153 NIGLQGMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
              L  +  GQ LDI  +D  +   E +   + K KTG L   +     +M   S+N + 
Sbjct: 116 E--LLELHRGQGLDIWWRDSNVCPTEEEYREMVKRKTGGLFRLSVR---LMQAFSEN-RS 169

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
                 + LG+ FQ+ DD  + E
Sbjct: 170 NFVPLLDALGLYFQIRDDFANLE 192


>gi|315504571|ref|YP_004083458.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315411190|gb|ADU09307.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 360

 Score = 43.5 bits (101), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 56/241 (23%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVG 76
           T +DD LL  A  ++            + L GGK++R +F          V+    +   
Sbjct: 35  TAVDDGLLPVAEAIEA-----------FVLGGGKRLRPAFGYWGYRGAGGVDSDQVVATL 83

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAG 120
           AA+E +   +LIHDDL  MD    RRG+P +H ++                 +  AI+ G
Sbjct: 84  AALEFVQASALIHDDL--MDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDAAAILLG 141

Query: 121 NGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           +  L ++ E++ S    P T  +     D +R+++ +             GQ LD+  + 
Sbjct: 142 DLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTV-------------GQYLDVLTQA 188

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL----RCFGENLGIIFQLADDL 227
             +T +    K+       +  E   ++  A       +      +G  LG  FQL DD+
Sbjct: 189 TGDTSLDRAAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDV 248

Query: 228 L 228
           L
Sbjct: 249 L 249


>gi|302868959|ref|YP_003837596.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302571818|gb|ADL48020.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 360

 Score = 43.5 bits (101), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 56/241 (23%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVNHLTALRVG 76
           T +DD LL  A  ++            + L GGK++R +F          V+    +   
Sbjct: 35  TAVDDGLLPVAEAIEA-----------FVLGGGKRLRPAFGYWGYRGAGGVDSDQVVATL 83

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAG 120
           AA+E +   +LIHDDL  MD    RRG+P +H ++                 +  AI+ G
Sbjct: 84  AALEFVQASALIHDDL--MDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFGDAAAILLG 141

Query: 121 NGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           +  L ++ E++ S    P T  +     D +R+++ +             GQ LD+  + 
Sbjct: 142 DLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTV-------------GQYLDVLTQA 188

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL----RCFGENLGIIFQLADDL 227
             +T +    K+       +  E   ++  A       +      +G  LG  FQL DD+
Sbjct: 189 TGDTSLDRAAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDV 248

Query: 228 L 228
           L
Sbjct: 249 L 249


>gi|255716258|ref|XP_002554410.1| KLTH0F04642p [Lachancea thermotolerans]
 gi|238935793|emb|CAR23973.1| KLTH0F04642p [Lachancea thermotolerans]
          Length = 351

 Score = 43.5 bits (101), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 27/207 (13%)

Query: 37  DRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +R LS +  YA+L GKK            F +  L     G  IE +  Y L+ DD+  M
Sbjct: 52  NRGLSVVDSYAILKGKKSYE--ELSEEEYFKLATL-----GWCIELLQAYFLVADDM--M 102

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D    RRG+P  + + +EV  I   +  +     I    K   K +     +L L H++ 
Sbjct: 103 DKSITRRGQPCWY-RVEEVGEIAINDAFMLEG-AIYCLLKNHFKQDSYYVELLELFHDVT 160

Query: 156 LQGMLGGQMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            Q  LG Q+LD+          D+F  +   F++ + KT A   F       M  A  ++
Sbjct: 161 FQTELG-QLLDLITAPEDNVDLDKFSLDRHSFIV-RFKT-AYYSFYLPVALAMHAAGISD 217

Query: 207 KERLRCFGE---NLGIIFQLADDLLDC 230
              L+   +    LG  FQ+ DD LDC
Sbjct: 218 ARDLKQAQDVLIPLGEYFQIQDDYLDC 244


>gi|78191047|gb|ABB29848.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 234

 Score = 43.5 bits (101), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 22/175 (12%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G  IE +  Y L+ DD+  MDN + RRG+P  + +  +V  I   +G+L     + 
Sbjct: 2   ASALGWRIEWLQAYFLVLDDI--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53

Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDE---------TQVF 178
           +     LK++ R++     +L L + +  Q    GQM+D+    + E         T   
Sbjct: 54  NHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPTHRR 112

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++Q                +MA  + ++   ++     +GI FQ+ DD LDC  D
Sbjct: 113 IVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFAD 167


>gi|328714372|ref|XP_001947385.2| PREDICTED: geranylgeranyl pyrophosphate synthase-like
           [Acyrthosiphon pisum]
          Length = 327

 Score = 43.5 bits (101), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 20/197 (10%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           H  +LL    Y + + GK+IR+ L         +       +G  ++ +H  SL+ DD+ 
Sbjct: 31  HIIKLLQPFTYIMQVPGKQIRAKLAHAFNYWLKIPSDKLAVIGDIVQMLHNSSLLTDDI- 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             DN  +RRG P  H  Y   + I A N +   A E   S    +   + ++ +L L   
Sbjct: 90  -QDNSVLRRGIPVAHSIYGVASTINAANYMSFVALERTLSLGHPMATTVYTEQVLELHRG 148

Query: 154 IGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            G++       +  +D +     DE +   I+  KTG L   A     + +  S N+  +
Sbjct: 149 QGME-------IYWRDNYTCPTEDEYKKMTIR--KTGGLFMLAIRLMQLFS-DSTNDFTK 198

Query: 210 LRCFGENLGIIFQLADD 226
           L      LG+ FQ+ DD
Sbjct: 199 LTGI---LGLYFQIRDD 212


>gi|67541280|ref|XP_664414.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4]
 gi|40739019|gb|EAA58209.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4]
 gi|259480406|tpe|CBF71507.1| TPA: ThiJ/PfpI family protein (AFU_orthologue; AFUA_3G01210)
           [Aspergillus nidulans FGSC A4]
          Length = 933

 Score = 43.5 bits (101), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 15/151 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           + +H  SL+ DD+   D+  +RRG+P  H  +     I + N LL  A + + +    L 
Sbjct: 403 QSLHNASLMLDDI--EDHSPLRRGRPATHTIFGAEQTINSANYLLIDAMQKVRA----LD 456

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACES 195
           D +   + L   HN+ +     GQ  D+    Q +   E +   + ++KT  L       
Sbjct: 457 DPVCLDIYLEEMHNLFV-----GQSFDLYWTRQGQCPSEDEYLAMVRLKTSGLFRLLTRL 511

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            A +A   +    RL    ++LG  FQ+ DD
Sbjct: 512 MAQIAPVQRGLDRRLSNLSDSLGEFFQIRDD 542


>gi|325190513|emb|CCA25012.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14]
          Length = 345

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 24/208 (11%)

Query: 41  SAIRYALLGGKKIRSFLVTECA-SLFNVNHLTALR-----VGAAIECIHCYSLIHDDLPS 94
             + Y  LGGK  R  LV ECA SLF       ++     +G  IE +  + LI DD+  
Sbjct: 40  EVMEYNCLGGKLNRGLLVVECAKSLFGEELSPEIKRKANILGWCIELVQAFFLIADDI-- 97

Query: 95  MDNGYIRRGKPTVH-IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           MDN  +RRG+   + +   E+TA+     + ++ F I+   +   ++ I    ++ L  +
Sbjct: 98  MDNSLMRRGQICWYKLPKVELTAVNDAFLMESFVFRIL---RLHFRNEITYTDIIHLFQD 154

Query: 154 IGLQGMLGGQMLDIQDEFID---ETQVFMIQ------KMKTGALMCFACESGAIMAHASQ 204
             +     GQ+LD+  + ++   +   F ++      + KT     +   + A++     
Sbjct: 155 -TIHRTEMGQLLDLTSQPLNAPSDLSRFTVERYRKIVRYKTAYYTFYLPLACAMLLRGIL 213

Query: 205 NEK--ERLRCFGENLGIIFQLADDLLDC 230
           +E   +  +     +G  FQ+ DD LDC
Sbjct: 214 DEPSHQVAQDICMEIGEYFQIQDDFLDC 241


>gi|269977242|ref|ZP_06184215.1| dimethylallyltransferase [Mobiluncus mulieris 28-1]
 gi|307700943|ref|ZP_07637968.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
 gi|269934545|gb|EEZ91106.1| dimethylallyltransferase [Mobiluncus mulieris 28-1]
 gi|307613938|gb|EFN93182.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
          Length = 360

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 31/206 (15%)

Query: 47  LLGGKKIRSF--LVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           LL GK+ R+    +   AS   V+       L +G  +E     +++HDD+  +D   IR
Sbjct: 47  LLRGKRFRAIGAYIGWIASGGTVSPQIPGCLLDLGTCLELFQASAIVHDDI--IDEARIR 104

Query: 102 RGKPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           RG P+  I           ++ E  AI+ G+ L   A    +S    L D+ R Q +  L
Sbjct: 105 RGLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFAAANSYFASAVKGL-DSARLQALGQL 163

Query: 151 THNIGLQGMLG-GQMLDIQDEFID---------ETQVFMIQKMKTGALMCFACESGAIMA 200
              + +Q  +  GQ LD+  E  D         E+ + +I+       +      GA +A
Sbjct: 164 Y--VTMQAEVAYGQYLDLFAESRDLTADVPPSKESAMEVIRHKTARYSVVIPILIGAALA 221

Query: 201 HASQNEKERLRCFGENLGIIFQLADD 226
            A+ +   +L  F   LGI +QL DD
Sbjct: 222 GATPDLLVKLEDFSTPLGIAYQLRDD 247


>gi|93278758|pdb|2AZJ|A Chain A, Crystal Structure For The Mutant D81c Of Sulfolobus
           Solfataricus Hexaprenyl Pyrophosphate Synthase
 gi|93278759|pdb|2AZJ|B Chain B, Crystal Structure For The Mutant D81c Of Sulfolobus
           Solfataricus Hexaprenyl Pyrophosphate Synthase
          Length = 289

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 20/156 (12%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +H  SL   D+  +D    RRG     + Y     I   N L+  A  II +    
Sbjct: 77  AIEILHSASLALCDIVDLDA--TRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGD 134

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             D + + + L    ++G           ++D + D +      ++KTG+L      S  
Sbjct: 135 --DALNTSIELWKDTSVGA----------LRDMY-DNSDYIRTIELKTGSLFKL---STV 178

Query: 198 IMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCE 231
           + A+AS+  N K+++   G+ LGII+Q+ DD +D +
Sbjct: 179 LSAYASKHYNTKQQMLDVGKYLGIIYQVIDDFVDYK 214


>gi|78191061|gb|ABB29855.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 234

 Score = 43.1 bits (100), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 22/175 (12%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G  IE +  Y L+ DD+  MDN + RRG+P  + +  +V  I   +G+L     + 
Sbjct: 2   ASALGWCIEWLQAYFLVLDDV--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53

Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDE---------TQVF 178
           +     LK++ R++     +L L + +  Q    GQM+D+    + E         T   
Sbjct: 54  NHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPTHRR 112

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++Q                +MA  + ++   ++     +GI FQ+ DD LDC  D
Sbjct: 113 IVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFAD 167


>gi|213513990|ref|NP_001133850.1| Farnesyl pyrophosphate synthetase [Salmo salar]
 gi|209155566|gb|ACI34015.1| Farnesyl pyrophosphate synthetase [Salmo salar]
          Length = 359

 Score = 43.1 bits (100), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 89/219 (40%), Gaps = 32/219 (14%)

Query: 37  DRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIH 89
           +RL   + Y   GGK+ R   ++     L     LT      AL VG  IE +  + L+ 
Sbjct: 49  NRLREVLHYNTPGGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCIELLQAFFLVA 108

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146
           DD+  MD    RRG+P  + +  E   + A N     +F +  S    L+ + R+Q    
Sbjct: 109 DDI--MDASVTRRGQPCWYKR--ERVGLDAIND----SFLLEGSIYRLLRRHCRAQPYYV 160

Query: 147 -MLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM-----IQKMKTGALMCFACESGA 197
            +L L      Q  LG Q LD+       ID  +  M     I K KT A   F     A
Sbjct: 161 HLLELFTETSFQTELG-QALDLMTAPPGQIDLNRFTMERYKAIVKYKT-AFYSFYLPVAA 218

Query: 198 IMAHA---SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            M  A   S+ E    +     +G  FQ+ DD LDC  D
Sbjct: 219 AMYMAGIDSEEEHNNAKHILLEMGEFFQIQDDYLDCYGD 257


>gi|296129905|ref|YP_003637155.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021720|gb|ADG74956.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109]
          Length = 372

 Score = 43.1 bits (100), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 13/78 (16%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA--------LRVGAAIECIHCYSLIHD 90
           L+ A+   + GGK++R+     C   +  +  T         LR GAA+E     +L HD
Sbjct: 43  LVDAVERMVAGGKRLRAAF---CYWSWRAHGGTPGDGREQGVLRAGAALELFQAAALFHD 99

Query: 91  DLPSMDNGYIRRGKPTVH 108
           D+  MD+   RRG PT H
Sbjct: 100 DV--MDDSSTRRGLPTAH 115


>gi|294995177|ref|ZP_06800868.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           210]
          Length = 325

 Score = 43.1 bits (100), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 49  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIGASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 217 RDIIAISGD 225


>gi|170027724|ref|XP_001841747.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus]
 gi|167862317|gb|EDS25700.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus]
          Length = 380

 Score = 43.1 bits (100), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 80/204 (39%), Gaps = 21/204 (10%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNH-LT------ALRVGAAIECIHCYSLIHDDLPS 94
           A++Y +  GKK R         +   +H LT      A  +G  IE      LI DD+  
Sbjct: 78  ALQYNVPQGKKNRGLAAVLAYRMLAKSHELTPENIRRAHYLGWCIEMFQSVFLICDDV-- 135

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD    RRG+P  + + D+V      + L+  A  I    K Q  D      ++ + + I
Sbjct: 136 MDGSQTRRGQPCWY-KVDDVKLTAVNDALMLDA-AIFHVLKKQFGDEPYYNKLVEMFNEI 193

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQNEKER 209
                +G Q LD+Q   +D TQ  M     I   KT A   F       M     N+ E 
Sbjct: 194 KFITTVG-QSLDLQSAKLDVTQYTMDLYKSIVSHKT-AYYTFYLPVALAMHMTGFNDPEV 251

Query: 210 LRCFGE---NLGIIFQLADDLLDC 230
            R        +G  FQ  DD LDC
Sbjct: 252 FRQTKTILLEIGRFFQAQDDFLDC 275


>gi|145595766|ref|YP_001160063.1| polyprenyl synthetase [Salinispora tropica CNB-440]
 gi|145305103|gb|ABP55685.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
          Length = 360

 Score = 43.1 bits (100), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 54/251 (21%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIR---SFLVTECASLFNV 67
           +R+D  L D L+   + M         L  A+  + L GGK++R   ++     A   + 
Sbjct: 17  QRVDKALADFLVTRRAWMTDVDASLAPLADAVEAFVLGGGKRLRPAFAYWGYRGAGGIDT 76

Query: 68  NHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE------------- 113
             + TAL   AA+E +   +LIHDDL  +D    RRG+P VH+++               
Sbjct: 77  EQVATAL---AALEFVQASALIHDDL--IDRSDTRRGEPAVHLRFTARHRSAGWDGDAAG 131

Query: 114 ---VTAIIAGNGLLTYAFEIISS----PKTQLK-----DNIRSQLMLSLTHNIGLQGMLG 161
                AI+ G+  L ++ E++ S    P T  +     D +R+++ +             
Sbjct: 132 FGDAAAILLGDLCLVWSDELLHSAGLDPHTVARARPIFDQMRTEVTV------------- 178

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC----FGENL 217
           GQ LD+  +   +T V    K+       +  E   ++  A  +    +      +G  L
Sbjct: 179 GQYLDVLTQATGDTSVERAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSAYGLPL 238

Query: 218 GIIFQLADDLL 228
           G  FQL DD+L
Sbjct: 239 GEAFQLRDDVL 249


>gi|289704967|ref|ZP_06501382.1| polyprenyl synthetase [Micrococcus luteus SK58]
 gi|289558303|gb|EFD51579.1| polyprenyl synthetase [Micrococcus luteus SK58]
          Length = 371

 Score = 43.1 bits (100), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 30/153 (19%)

Query: 39  LLSAIRYALLGGKKIRSFLVT--ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L+ AI     GGK++R+ L      A+            GAA E     +LIHDD+  +D
Sbjct: 47  LVDAIADLTAGGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LD 104

Query: 97  NGYIRRGKPTVHIQYDEV----------------TAIIAGN---GLLTYAFEIISSPKTQ 137
               RRG P+VH +++ +                 AI+AG+   G+   AF  + +  T 
Sbjct: 105 RSDTRRGMPSVHRRFESLHREAGWRHAAEHFGVSAAILAGDVALGMSETAFARVLA-GTP 163

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
            +D  R++L           G++ GQ LD+  E
Sbjct: 164 REDRARAELERMRF------GVMAGQYLDVVAE 190


>gi|255988559|gb|ACU51163.1| farnesyl pyrophosphate synthase [Nicotiana tabacum]
          Length = 234

 Score = 43.1 bits (100), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 22/175 (12%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G  IE +  Y L+ DD+  MDN + RRG+P  + +  +V  I   +G+L     + 
Sbjct: 2   ASALGWRIEWLQAYFLVLDDI--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53

Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-------- 179
           +     LK++ R++     +L L + +  Q    GQM+D+    + E  +          
Sbjct: 54  NHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPIHRR 112

Query: 180 IQKMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I + KT     +   + A+ MA  + ++   ++     +GI FQ+ DD LDC  D
Sbjct: 113 IVQYKTAYYSFYLPAACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFAD 167


>gi|260814652|ref|XP_002602028.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae]
 gi|229287333|gb|EEN58040.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae]
          Length = 357

 Score = 43.1 bits (100), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 32/218 (14%)

Query: 38  RLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHD 90
           R    + Y   GGK+ R   ++T    L + + LT      A+ VG  IE +  + L+ D
Sbjct: 48  RFRQVLEYNCPGGKRNRGLSVITSYRFLVSSDQLTEENIHRAMVVGWCIEWLQAFFLVLD 107

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL---- 146
           D+  MD    RRG+P  + + +EV     GN  +  A  I S     L+   R Q     
Sbjct: 108 DI--MDQSQTRRGQPCWY-RVEEV-----GNMAINDACYIESCIYRLLRRFCRGQPYYVD 159

Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFID-----ETQVFMIQKMKTGALMCFACESGAI 198
           +L L      + ++G Q LD+    D  ++     E +   I K KT A   F     A 
Sbjct: 160 LLELFQGTTYKTIVG-QSLDLITSPDGKVNLSNFTEERYNAIVKYKT-AFYSFHLPVAAA 217

Query: 199 MAHA---SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           M  A   S+   E  +     +G  FQ+ DD LDC  D
Sbjct: 218 MYMAGITSKESHENAKTILLEMGRFFQIQDDYLDCYGD 255


>gi|300866343|ref|ZP_07111044.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506]
 gi|300335648|emb|CBN56204.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506]
          Length = 323

 Score = 43.1 bits (100), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 8/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD   +D+  +RRG PTVH  +    A++AG+ L   +   +++
Sbjct: 72  RLAEITEMIHTASLVHDD--VVDDSDVRRGIPTVHSYFGNRVAVLAGDFLFAQSSWYLAN 129

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   + S++++ L      QG+ G       + +++++        KT +L+  + 
Sbjct: 130 LDNLEVVKLLSEVIMDLAEGEIQQGLNGFDTTLSIEAYLEKSY------YKTASLIANSS 183

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++   ++  S    + L  +G ++G+ FQ+ DD+LD
Sbjct: 184 KAAGCLSGVSAQLADDLYNYGRDIGLAFQIVDDILD 219


>gi|221116455|ref|XP_002156744.1| PREDICTED: similar to Pdss1 protein, partial [Hydra magnipapillata]
          Length = 199

 Score = 43.1 bits (100), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  L+   A   NV+           L++    E IH  SL+HDD+  +D+  +RR
Sbjct: 92  GKLFRPVLIVLMAKALNVHQQNTSDLLECQLKMAMIAEMIHTASLLHDDV--IDDAVLRR 149

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            KP+V+  +    +I+AG+ +L  A  ++S
Sbjct: 150 NKPSVNQIFSSKQSILAGDFILARASILLS 179


>gi|307324121|ref|ZP_07603330.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306890570|gb|EFN21547.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 378

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 16/193 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L   CA     +   A+    A+E +H +SL+HDD+  MD    RR +PTV 
Sbjct: 84  GGKGVRQALAVLCAEAAGASGEAAVAGAVAVELVHTFSLLHDDI--MDGDQTRRTRPTVW 141

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    A++AG+           + +                 ++ L  ++ GQ  D+ 
Sbjct: 142 KAYGTGPAVLAGD------ALFALAVEALAAVPGAGAAAAVRRLSVALGDLVRGQADDLL 195

Query: 169 DEFIDETQVFMI-----QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            E    T    +     ++M   KTGAL+  A   GA +A A ++    L   G ++G+ 
Sbjct: 196 FESRPWTGATAVGPEEYRRMAEHKTGALLGCAAALGAALAGAPESTAAALDRAGRHMGVA 255

Query: 221 FQLADDLLDCEED 233
           FQ+ADDLL    D
Sbjct: 256 FQVADDLLGIWGD 268


>gi|45709211|gb|AAH67768.1| GGPS1 protein [Homo sapiens]
          Length = 300

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +   Q    + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHQDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|315655468|ref|ZP_07908367.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333]
 gi|315490123|gb|EFU79749.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333]
          Length = 361

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 30/177 (16%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----------QYDEVTAIIAGN 121
           L +GA++E     +L+HDD+  +DN   RRG P   I           ++ +  AI+ G+
Sbjct: 79  LDLGASLELFQTSALVHDDI--IDNAIKRRGLPAAQIAFMTSFPMGGPRFGDSAAILWGD 136

Query: 122 GLLTYAFEIISSPKTQLK-DNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
            L   A    S   + L  +N    S L +++   +       GQ LD+  E  +     
Sbjct: 137 LLYAAANSYFSQAISTLSMENAHRASNLFVTMQAEVAY-----GQFLDLSAETRELSPDM 191

Query: 174 ----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
               E  + +I+       +      GA +  AS +  E+L  F   LG+ +QL DD
Sbjct: 192 PPSREAAMEIIKHKTARYSVVIPLLLGAALRGASDSLIEQLEGFATPLGVAYQLRDD 248


>gi|254581250|ref|XP_002496610.1| ZYRO0D04070p [Zygosaccharomyces rouxii]
 gi|238939502|emb|CAR27677.1| ZYRO0D04070p [Zygosaccharomyces rouxii]
          Length = 322

 Score = 42.7 bits (99), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 17/185 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  RS L+     ++ +      ++   +  +H  SL+ DD+   D+   RRG PT H 
Sbjct: 34  GKSFRSKLINVFNEIYQIPIEKTNQISTLVAILHNASLLIDDIE--DSSATRRGIPTSHT 91

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS----PKTQLKD--NIRSQLMLSLTHNIGLQGMLGGQ 163
            +     I A N +   A EI+ +     K  L D   I +Q M++L    GL       
Sbjct: 92  LFGVPLTINAANYMYFKAMEILQTISGDDKILLHDLMVIFNQEMINLHRGQGLDIYWRDN 151

Query: 164 MLDIQDEFI-DETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIF 221
           +L    +FI DE   + +   KTG L         IM   +  E    L      LGII+
Sbjct: 152 LL----QFIPDEATYYNMVMNKTGGLFRLTVR---IMELLTDVELPHSLVPLSNLLGIIY 204

Query: 222 QLADD 226
           Q+ DD
Sbjct: 205 QIRDD 209


>gi|238603525|ref|XP_002395972.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553]
 gi|215467625|gb|EEB96902.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553]
          Length = 232

 Score = 42.7 bits (99), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK  RS++V  C S    +      + AAIE +H  SL+ DD+   D    RRG   VH
Sbjct: 150 GGKSWRSYIVLACLSALGKDPEPFKPLLAAIELLHTGSLVIDDI--QDESPTRRGVTAVH 207

Query: 109 IQYDEVTAIIAGNG 122
             +   TAI AG  
Sbjct: 208 HVWGVPTAINAGTA 221


>gi|217072134|gb|ACJ84427.1| unknown [Medicago truncatula]
          Length = 251

 Score = 42.7 bits (99), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 28/215 (13%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86
           Q  DR+L    Y + GGK  R         L+ E  +L +     A  +G  IE +  Y 
Sbjct: 33  QWVDRMLD---YNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFQASALGWCIEWLQAYF 89

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MDN + RRG+P  + +  +V  I A +G+L     I    +   K       
Sbjct: 90  LVLDDI--MDNSHTRRGQPCWY-RVPKVGMIAANDGVLLRN-HIPRILRKHFKGKPYYVE 145

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCF---ACES 195
           +L L + +  Q    GQM+D+      E  +          I + KT     +   AC  
Sbjct: 146 LLDLFNEVEFQTA-AGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVAC-- 202

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +MA  + +    ++     +G  FQ+ DD LDC
Sbjct: 203 ALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDC 237


>gi|8574390|emb|CAB94793.1| geranylgeranyl pyrophosphate synthase [Mycobacterium aurum]
          Length = 371

 Score = 42.7 bits (99), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 50/183 (27%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAGN 121
           ++E +H ++L+ DD+  MD   +RRG+P+ H                 ++ E  A++ G+
Sbjct: 93  SLELLHAFALLQDDV--MDESPMRRGRPSAHRAFERWHRERGLPGSSARFGESAAVLLGD 150

Query: 122 GLLTYAFEII------------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
             L +A +++            + P+    D +R++L +             GQ  D+ +
Sbjct: 151 LCLVWAEQMLRESGVDEAALTRAWPR---YDAMRTELAV-------------GQFADLVN 194

Query: 170 E---FIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +   F    +V  + + K+G        E GA +A         L  +GE +G  FQL D
Sbjct: 195 DTAGFPQLDEVLDVARRKSGNYTVRRPLEIGAALAGCDAEVITVLGRYGEAIGEAFQLRD 254

Query: 226 DLL 228
           DLL
Sbjct: 255 DLL 257


>gi|295656234|gb|AAK11525.2|AF279807_1 geranylgeranyl pyrophosphate synthase [Penicillium paxilli]
          Length = 375

 Score = 42.7 bits (99), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R+ L+    S   V   +   +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 88  GKDVRTQLIQAFNSWLQVPPESLAIISKVVTMLHTASLLIDDV--EDNSVLRRGVPVAHN 145

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A + I   K     +I  + +L+L    G+       +    +
Sbjct: 146 IFGTAQTINSANYVYFLALQEIQQLKNPAAIDIYVKELLNLHRGQGMDLFWRDTLTCPTE 205

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE+++     M+   KTG L   A +   +M   S   K+ +      +G+IFQ+ DD L
Sbjct: 206 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESSTGKDCVSLVNV-MGLIFQICDDYL 255

Query: 229 D 229
           +
Sbjct: 256 N 256


>gi|167391930|ref|XP_001739954.1| geranylgeranyl pyrophosphate synthetase [Entamoeba dispar SAW760]
 gi|165896168|gb|EDR23665.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba dispar
           SAW760]
          Length = 349

 Score = 42.7 bits (99), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 41/187 (21%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-------HIQ-------------- 110
            +R   A+E +H  +L HDD+  MD   +RR  PTV       +++              
Sbjct: 69  VIRTACAMELLHDSTLAHDDI--MDEDELRRNAPTVVKTFYDKYVERNKEDVKTEKFLFI 126

Query: 111 -----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                Y    AI+ GN L + A  +     + +     ++++L L   +       GQ+L
Sbjct: 127 SRGTTYASSIAIMVGNILYSMAQRLCLESGSNI-----AEMLLELFDVLNY-----GQIL 176

Query: 166 DIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           D+     +++ ++ +I  MKT          G  +A  S+++ E  + +GE+ GI FQ+ 
Sbjct: 177 DMSCLSTVEDYKLNVI--MKTAIFFKTTACIGLTLAGRSEHDIEIGKEWGEHFGIAFQMR 234

Query: 225 DDLLDCE 231
           DDLLD +
Sbjct: 235 DDLLDID 241


>gi|331251210|ref|XP_003338205.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|309317195|gb|EFP93786.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 503

 Score = 42.7 bits (99), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 11/188 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IRS ++       +V       V   +  +H  SL+ DD+   D   +RRG P  H 
Sbjct: 213 GKEIRSMMIDAFNHWLSVPTEQLNIVKRIVGLLHTASLLMDDV--EDGSELRRGIPVAHK 270

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            Y     I + N +   A++ +S      +D+  S L   +  N  L  +  GQ +D+  
Sbjct: 271 IYGIPQTINSANYVYFLAYQELSMLHPS-QDSSASNLWKLI--NEELLRLHRGQGMDLYW 327

Query: 168 QDEFIDETQVFMIQ--KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D     T+   IQ  K KTG L   A +   +MA +   +        + +GIIFQ+ D
Sbjct: 328 RDSLTCPTEEEYIQMVKNKTGGLFRIAIK--LMMAMSPLQQIPDYVPLVDLIGIIFQIRD 385

Query: 226 DLLDCEED 233
           DLL+   D
Sbjct: 386 DLLNLSSD 393


>gi|1346030|sp|P49350|FPPS_ARTAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|1022770|gb|AAC49452.1| farnesyl diphosphate synthase [Artemisia annua]
          Length = 343

 Score = 42.7 bits (99), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
           K  DT+  +L+   A          +   + Y + GGK  R   V +   L     L+  
Sbjct: 12  KVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLKGGELSDD 71

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +  +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G+L   
Sbjct: 72  EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLPKVGMIAANDGILLRN 128

Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---- 179
                 P+  LK + R +     ++ L + +  Q    GQM+D+    + E  +      
Sbjct: 129 ----HVPRI-LKKHFRGKPYYVDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLS 182

Query: 180 ----IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
               I + KT     +   + A++      +K   ++     +G  FQ+ DD LDC
Sbjct: 183 IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDC 238


>gi|260906389|ref|ZP_05914711.1| putative geranylgeranyl pyrophosphate synthase [Brevibacterium
           linens BL2]
          Length = 354

 Score = 42.7 bits (99), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 29/214 (13%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +L  ++ +   GGK IR  L+ +    L   +   A+    A++ +H   +IHDD+  +D
Sbjct: 39  QLWDSLTHMATGGKLIRPRLLLDAHRGLGGRDQAAAVDAACAMQLLHIALVIHDDV--ID 96

Query: 97  NGYIRRGKPTVHIQ-----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           N  IRRG+  +  +                 + + TA++ G+ +LT A  +++  +    
Sbjct: 97  NDTIRRGEANISGEFASDALCRGAGRREAQVWGDATALLGGDLMLTLAHSLLARLEV--- 153

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQKMKTGALMCFACE-- 194
           D+ + + +L +  +   +   G      L +  E     +V  +   KT A+  F     
Sbjct: 154 DDSKRRAILDIFDDTLFRSAAGEHSDVWLSLHLEEARSQEVLEMAGQKT-AVYSFQAPLL 212

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             A++A AS  +   L      +GI++QL DD+L
Sbjct: 213 IAAVLAGASSTQTAELAAIAAQIGIVYQLRDDVL 246


>gi|1346028|sp|P49351|FPPS1_LUPAL RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase
           1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 1; AltName:
           Full=Dimethylallyltranstransferase 1; AltName:
           Full=Farnesyl diphosphate synthase 1; AltName:
           Full=Geranyltranstransferase 1
 gi|558923|gb|AAA86687.1| farnesyl pyrophosphate synthase [Lupinus albus]
          Length = 342

 Score = 42.7 bits (99), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 28/215 (13%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYS 86
           Q  DR+L    Y + GGK  R   V +   L    H         A  +G  IE +  Y 
Sbjct: 33  QWLDRMLD---YNVPGGKLNRGLSVIDSYRLLKDGHELNDDEIFLASALGWCIEWLQAYF 89

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MDN + RRG+P    +  +V  I A +G+L     I    K   +       
Sbjct: 90  LVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-HIPRILKKHFRGKPYYAD 145

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCF---ACES 195
           +L L + +  Q    GQM+D+      E  +          I + KT     +   AC  
Sbjct: 146 LLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVAC-- 202

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +M   + +    ++    ++G  FQ+ DD LDC
Sbjct: 203 ALLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDC 237


>gi|289573627|ref|ZP_06453854.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           K85]
 gi|289538058|gb|EFD42636.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           K85]
          Length = 282

 Score = 42.7 bits (99), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 49  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156

Query: 168 QD--EFIDETQVFM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  + ++ +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 157 RGPASHIDTIEHYLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 217 RDIIAISGD 225


>gi|296939580|gb|ADH95185.1| putative farnesyl diphosphate synthase [Aquilaria microcarpa]
          Length = 342

 Score = 42.7 bits (99), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 36/216 (16%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLT------ALRVGAAIECIHCYSLIH 89
           DR+L    Y + GGK  R   V +   L    N LT      A  +G  IE +  Y L+ 
Sbjct: 36  DRMLD---YNVPGGKLNRGLSVIDSYKLLKEGNELTEEEVFLASALGWCIEWLQAYFLVL 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146
           DD+  MDN + RRG+P    +  +V  I   +G+L     + +     LK++ R +    
Sbjct: 93  DDI--MDNSHTRRGQPC-WFRLPKVGLIAVNDGIL-----LRNHISRILKNHFRGKAYYV 144

Query: 147 -MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---ACE 194
            +L L + +  Q   G QM+D+      E  +          I + KT     +   AC 
Sbjct: 145 DLLDLFNEVEFQTACG-QMIDLITTLEGEKDLTKYSLSKHRRIVQYKTAYYSFYLPVAC- 202

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +M+  + +    ++    ++GI FQ+ DD LDC
Sbjct: 203 -ALLMSGENLDNHVDVKNILVDMGIYFQVQDDFLDC 237


>gi|21219099|ref|NP_624878.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|256789883|ref|ZP_05528314.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289773766|ref|ZP_06533144.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|6013088|emb|CAB57417.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|289703965|gb|EFD71394.1| polyprenyl synthetase [Streptomyces lividans TK24]
          Length = 352

 Score = 42.7 bits (99), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 35/210 (16%)

Query: 43  IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +R A   GK++R+   +     A     + L  +R  A++E +H  +++HDDL  +D+  
Sbjct: 43  LRKAAGHGKRLRAAFCYWGWRAAGQPESDAL--VRAAASMELVHAAAVVHDDL--IDDSR 98

Query: 100 IRRGKPTVHIQYDEV---------------TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           +R G PT H+  + V                A++ G+ L+  A  + ++         R+
Sbjct: 99  LRHGLPTAHVALEAVLARDGRPDARTAARSLAMLVGDQLMVLAGLLFTTSGLPAAYLARA 158

Query: 145 QLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES----GAI 198
           + + ++      + ++ G+ L+I       D      + + KT     +  E     G +
Sbjct: 159 RDLWAVL----ARELVAGECLEILHTGGPPDTGTSLKVVRYKTAK---YTVEHPLLIGGL 211

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +A A+   ++  R +   LG  FQL DDLL
Sbjct: 212 LAGAAPALRDTYRAYALPLGEAFQLRDDLL 241


>gi|55979982|ref|YP_143279.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8]
 gi|73535442|pdb|1WMW|A Chain A, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
           From Thermus Thermophilus
 gi|73535443|pdb|1WMW|B Chain B, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
           From Thermus Thermophilus
 gi|73535444|pdb|1WMW|C Chain C, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
           From Thermus Thermophilus
 gi|73535445|pdb|1WMW|D Chain D, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
           From Thermus Thermophilus
 gi|31745059|dbj|BAC77651.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus]
 gi|55771395|dbj|BAD69836.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8]
          Length = 330

 Score = 42.7 bits (99), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 86/228 (37%), Gaps = 29/228 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           I   L + LL    H    + D L     Y   GGK +R  L    A          L  
Sbjct: 8   IRQALQERLLARLDHPDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGLEA 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E    + L+HDD+   D    RRG+P +H  +    A+ AG+ +    + +++   
Sbjct: 65  ATALELFQNWVLVHDDI--EDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGL 122

Query: 134 -----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF--IDETQVFM--IQKM 183
                P   L +        +   ++ L   LGG   L  +D F  +     +   +  +
Sbjct: 123 ARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPL 182

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + GAL+       A        E+  LR     LG  FQ+ DD+L+ E
Sbjct: 183 RLGALLAGKTPPAAY-------EEGGLR-----LGTAFQIVDDVLNLE 218


>gi|325289010|ref|YP_004265191.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964411|gb|ADY55190.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 304

 Score = 42.4 bits (98), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 22/235 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV 67
           +Q+N   I+ ++  L+     +  TQ   + +S  +RY + G       ++     +F+ 
Sbjct: 1   MQDNWAMIEQMMLQLI---HDYFPTQELKKYMSEFVRYKMEGHFPFGQLVILHY-QMFDG 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 R  AA+E +     I DDL   DN  +    P  +I +  V  I  G  +L+  
Sbjct: 57  QSTDIFRAAAAVELMILSLDIFDDLQDNDNFSV----PWNNIDHAIVMNIATGLLMLSTK 112

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
               S   T  + N ++  M +   N  +   + GQ +D+ +    E     + + K+G+
Sbjct: 113 ----SLEHTSFEPNKKA--MGTNYLNSCVIKAINGQHIDLLNLIESEKDYIEMVRSKSGS 166

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL-----LDCEEDLPKK 237
           LM  AC  G   A AS+N  + +  + E+LGII Q+ +D+     LD + DL  K
Sbjct: 167 LMASACLVGT--ALASENHHDVVNKYAEHLGIIAQIKNDINDIFRLDPKNDLLNK 219


>gi|300785964|ref|YP_003766255.1| polyprenyl synthetase [Amycolatopsis mediterranei U32]
 gi|299795478|gb|ADJ45853.1| polyprenyl synthetase [Amycolatopsis mediterranei U32]
          Length = 367

 Score = 42.4 bits (98), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 28/171 (16%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNG 122
           +E +HC++L+ DD+  MD   +RRG+  +H+                ++ E  AI+ G+ 
Sbjct: 93  LELLHCFALVQDDV--MDGSALRRGRTALHVRFARWHEEQGWAGSAPRFGESAAILFGDL 150

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDE---FIDETQVF 178
            L ++ +++       +     QL     H   ++  L  GQ+ D+ ++         + 
Sbjct: 151 FLVWSEQMLRESGLAAE-----QLARGWGHYDAMRAELAVGQLADLVNDARALPSWDTLL 205

Query: 179 MIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            + + K+G        E GA +A         L  FG  +G  FQL DDLL
Sbjct: 206 DVLRRKSGNYTVRRPLEFGAALAGCGPELMAGLGEFGGLVGEAFQLRDDLL 256


>gi|115738308|ref|XP_781908.2| PREDICTED: similar to Chain  , Avian Farnesyl Diphosphate Synthase
           (Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus]
 gi|115948816|ref|XP_001196369.1| PREDICTED: similar to Chain  , Avian Farnesyl Diphosphate Synthase
           (Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus]
          Length = 619

 Score = 42.4 bits (98), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 38/211 (18%)

Query: 45  YALLGGKKIRSFLVTEC-----ASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK+ R   V         S+ N   N  TA+ +G  +E +  Y LI DD+  MD 
Sbjct: 317 YTVPGGKRNRGLTVVNAFRQLANSVQNTEDNIHTAMVLGWCVEWLQAYFLIADDM--MDQ 374

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHN 153
              RRG+P  + + D V     GN  +  +F + +     LK  I  Q     ++ L H 
Sbjct: 375 SKTRRGQPCWYKK-DGV-----GNVAINDSFYVEACIYKLLKRYIGHQPYYVQVMELFHE 428

Query: 154 IGLQGMLGGQMLDI-----QDEFID---ETQVFMIQKMKTGALMCFACESGAIM------ 199
              Q ++G Q LD+      D  ++   E +   I K KT     +  E+ A+       
Sbjct: 429 TTYQTIMG-QSLDLLTSPENDRDLNRFTEQRYAAIVKWKTAFYSFYLPEALAMHMVGISD 487

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A +  N K  L      +G  FQ+ DD LDC
Sbjct: 488 AKSHTNAKTILL----QMGHFFQVQDDYLDC 514


>gi|63103173|gb|AAY33492.1| bifunctional GPPS/FPPS isoprenyl diphosphate synthase precursor
           [Myzus persicae]
          Length = 362

 Score = 42.4 bits (98), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%)

Query: 39  LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R         +++  +   + N   +  +G  +E +  Y L+ DD
Sbjct: 53  LAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDD 112

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149
           +  MDN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L 
Sbjct: 113 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILE 166

Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           L  ++ ++  +G Q LD+           +++  E    ++ K KT A   F       M
Sbjct: 167 LFFDVTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 223

Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
              + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 224 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 260


>gi|190149251|gb|AAY33490.3| putative mitochondrial isoprenyl diphosphate synthase precursor
           [Acyrthosiphon pisum]
          Length = 394

 Score = 42.4 bits (98), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%)

Query: 39  LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R         +++  +   + N   +  +G  +E +  Y L+ DD
Sbjct: 85  LAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDD 144

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149
           +  MDN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L 
Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILE 198

Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           L  ++ ++  +G Q LD+           +++  E    ++ K KT A   F       M
Sbjct: 199 LFFDVTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255

Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
              + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|121714909|ref|XP_001275064.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus
           clavatus NRRL 1]
 gi|119403220|gb|EAW13638.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus
           clavatus NRRL 1]
          Length = 359

 Score = 42.4 bits (98), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L++       +       +   I  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 85  GKDIRGKLISSFNEWLKIPEQKLDIIKRVIGLLHTASLLIDDI--QDSSKLRRGFPVAHS 142

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N    +A + +          I +  +L L    G+       ++   +
Sbjct: 143 IFGIAQTINSANFAYFWAQQELQKLGKSDALAIFTDELLRLHRGQGMDLYWRDSLICPTE 202

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +E++D     M+   KTG L   A +   +M   SQNE++ +    + LGIIFQ+ DD  
Sbjct: 203 EEYLD-----MVSN-KTGGLFRLAIK---LMQMESQNERDCVPLV-DLLGIIFQIRDDYQ 252

Query: 229 DCEEDLPKK 237
           + + DL  K
Sbjct: 253 NLQSDLYAK 261


>gi|15840414|ref|NP_335451.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|13880584|gb|AAK45265.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 333

 Score = 42.4 bits (98), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 57  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 114

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 115 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 164

Query: 168 QD--EFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  +    +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 165 RGPASHIDTIEHCLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 224

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 225 RDIIAISGD 233


>gi|63103171|gb|AAY33491.1| bifunctional putative mitochondrial GPPS/FPPS isorpenyl diphosphate
           synthase precursor [Myzus persicae]
          Length = 394

 Score = 42.4 bits (98), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%)

Query: 39  LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R         +++  +   + N   +  +G  +E +  Y L+ DD
Sbjct: 85  LAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDD 144

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149
           +  MDN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L 
Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILE 198

Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           L  ++ ++  +G Q LD+           +++  E    ++ K KT A   F       M
Sbjct: 199 LFFDVTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255

Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
              + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|169139097|gb|ACA48701.1| farnesyl diphosphate synthase 1 [Myzus persicae]
          Length = 394

 Score = 42.4 bits (98), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 31/213 (14%)

Query: 43  IRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           ++Y + GGKK R         +++  +   + N   +  +G  +E +  Y L+ DD+  M
Sbjct: 89  LQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDDI--M 146

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           DN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L L  +
Sbjct: 147 DNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILELFFD 202

Query: 154 IGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           + ++  +G Q LD+           +++  E    ++ K KT A   F       M   +
Sbjct: 203 VTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAMRMTN 259

Query: 204 QNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
            N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 260 INDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|156360985|ref|XP_001625302.1| predicted protein [Nematostella vectensis]
 gi|156212129|gb|EDO33202.1| predicted protein [Nematostella vectensis]
          Length = 303

 Score = 42.4 bits (98), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 22/194 (11%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L + GK++R  L+        +       +   ++ +H  SL+ DD+   DN
Sbjct: 16  LLEPYKYILQVPGKQVRETLIQAFNVWLKIPEDKLKIIADVVKMLHNSSLLIDDIE--DN 73

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y     I + N +   A E + S       ++ ++ +L L       
Sbjct: 74  SKLRRGIPVAHTIYGVAQTINSANYIYFKALEKVLSLNHPECIHVFTEELLELHR----- 128

Query: 158 GMLGGQMLDI--QDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
               GQ +DI  +D +    +E    M++K KTG L   A     +M   S+N+ + L  
Sbjct: 129 ----GQGMDIYWRDSYTCPTEEEYRDMVRK-KTGGLFRVAVR---LMQLFSENKSDFLPL 180

Query: 213 FGENLGIIFQLADD 226
             + LG+ FQ+ DD
Sbjct: 181 L-DMLGLYFQIRDD 193


>gi|323720556|gb|EGB29637.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 325

 Score = 42.4 bits (98), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GG   R       A L  + +       GAAIE +H  +L HD +  +D   + R  P+ 
Sbjct: 49  GGTPFRPLFTVLAAQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSD 106

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    AI+AG+    Y F   S   ++L     + +  +         ++ GQM   
Sbjct: 107 NTRWTNNFAILAGD----YRFATASQLASRLDPEAFAVVAEAFAE------LITGQMRAT 156

Query: 168 QD--EFIDETQ-VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +     ID  +    +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++
Sbjct: 157 RGPASHIDTIEHCLRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEIS 216

Query: 225 DDLLDCEED 233
            D++    D
Sbjct: 217 RDIIAISGD 225


>gi|153791942|ref|NP_001093301.1| farnesyl diphosphate synthase 2 [Bombyx mori]
 gi|146424708|dbj|BAF62114.1| farnesyl diphosphate synthase 2 [Bombyx mori]
          Length = 382

 Score = 42.4 bits (98), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 93/238 (39%), Gaps = 32/238 (13%)

Query: 19  ILDDLL------LQTASHMQ--TQHNDRLLSAIRYALLGGKKIR------SFLVTECASL 64
           + DDLL      LQ  S +    Q  D L   + Y L+GGK  R      S+   E    
Sbjct: 46  MFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPEK 105

Query: 65  FNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              + L  A ++G  +E    Y ++ DD+  MD   +RRG P  + +  EV    A N  
Sbjct: 106 VTEHTLKMACKLGWCVEMFQAYCIVLDDI--MDGSSVRRGMPCWY-RRPEVGITCAFNDS 162

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L     +    KT  + N     M  L +    +  +G  +  +      +   F + + 
Sbjct: 163 LLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRY 222

Query: 184 KT-----GALMCF--ACESGAIMAHASQNEKERLRCFGENL----GIIFQLADDLLDC 230
            T      A   +      G ++A   +N  E++    +++    G +FQ+ DD +DC
Sbjct: 223 YTIIKYKAAYYTYNLPVSLGLLLA---ENVDEKIYKSAQDICLEIGTMFQIQDDFIDC 277


>gi|46200288|ref|YP_005955.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27]
 gi|46197916|gb|AAS82328.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27]
          Length = 330

 Score = 42.4 bits (98), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 86/228 (37%), Gaps = 29/228 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           I   L + LL    H    + D L     Y   GGK +R  L    A          L  
Sbjct: 8   IRQALQERLLARLDHPDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGLEA 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E    + L+HDD+   D    RRG+P +H  +    A+ AG+ +    + +++   
Sbjct: 65  ATALELFQNWILVHDDI--EDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGL 122

Query: 134 -----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDIQDEF--IDETQVFM--IQKM 183
                P   L +        +   ++ L   LGG   L  +D F  +     +   +  +
Sbjct: 123 ARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPL 182

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + GAL+       A        E+  LR     LG  FQ+ DD+L+ E
Sbjct: 183 RLGALLAGKTPPAAY-------EEGGLR-----LGTAFQIVDDVLNLE 218


>gi|6016044|sp|O64905|FPPS_HELAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|3002542|gb|AAC78557.1| farnesyl pyrophosphate synthase [Helianthus annuus]
          Length = 341

 Score = 42.4 bits (98), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 33/221 (14%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIH 83
           H   Q  D++L    Y + GGK  R   V +   L     LT      A  +G  IE + 
Sbjct: 30  HDSRQWIDKMLD---YNVPGGKLNRGLSVVDSYQLLKGAELTDDEIFLASALGWCIEWLQ 86

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            Y L+ DD+  MD  + RRG+P    +  +V  I A +GL+         P+  LK + R
Sbjct: 87  AYFLVLDDI--MDGSHTRRGQPC-WFRLPKVGMIAANDGLILRN----HVPRI-LKKHFR 138

Query: 144 SQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF 191
            +     ++ L + +  Q    GQM+D+    + E  +          I + KT     +
Sbjct: 139 GKPYYVDLVDLFNEVEFQ-TASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFY 197

Query: 192 ACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDC 230
              + A++       N  E      E +G  FQ+ DD LDC
Sbjct: 198 LPVACALLMFGEDLDNHVEVKNVLVE-MGTYFQVQDDYLDC 237


>gi|164426247|ref|XP_960695.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A]
 gi|166214942|sp|P24322|GGPPS_NEUCR RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName: Full=Albino-3 protein;
           AltName: Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|157071260|gb|EAA31459.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A]
          Length = 433

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 13/178 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS +V    +  +V   +   +   I  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 146 GKDIRSQMVKAFDAWLDVPSESLEVITKVISMLHTASLLVDDV--EDNSVLRRGFPVAHS 203

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I   N +  YA + +   K     +I S+ +L+L    G+       +    +
Sbjct: 204 IFGIPQTINTSNYVYFYALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLTCPTE 263

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D++++     M+   KTG L       G  +  A              +G+IFQ+ADD
Sbjct: 264 DDYLE-----MVSN-KTGGLFRL----GIKLMQAESRSPVDCVPLVNIIGLIFQIADD 311


>gi|903319|gb|AAC13867.1| geranylgeranyl pyrophosphate synthetase [Neurospora crassa]
 gi|28949983|emb|CAD70868.1| farnesyltranstransferase (al-3) [Neurospora crassa]
          Length = 428

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 13/178 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS +V    +  +V   +   +   I  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 141 GKDIRSQMVKAFDAWLDVPSESLEVITKVISMLHTASLLVDDV--EDNSVLRRGFPVAHS 198

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I   N +  YA + +   K     +I S+ +L+L    G+       +    +
Sbjct: 199 IFGIPQTINTSNYVYFYALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLTCPTE 258

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D++++     M+   KTG L       G  +  A              +G+IFQ+ADD
Sbjct: 259 DDYLE-----MVSN-KTGGLFRL----GIKLMQAESRSPVDCVPLVNIIGLIFQIADD 306


>gi|300079894|gb|ADJ67472.1| farnesyl pyrophosphate synthase [Artemisia annua]
          Length = 343

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 92/232 (39%), Gaps = 20/232 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
           K  DT+  +L+   A          +   + Y + GGK  R   V +   L     L+  
Sbjct: 12  KVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNIPGGKLNRGLSVVDSYQLLKGGELSDD 71

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +  +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G+L   
Sbjct: 72  EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLLKVGMIAANDGILLRN 128

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-------- 179
             +    K   +     + ++ L + +  Q    GQM+D+    + E  +          
Sbjct: 129 -HVPRILKKHFRGKPYYEDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLSIHRR 186

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
           I + KT     +   + A++      +K   ++     +G  FQ+ DD LDC
Sbjct: 187 IVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDC 238


>gi|162538561|gb|ABY19312.1| farnesyl diphosphate synthase 1 [Myzus persicae]
          Length = 394

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%)

Query: 39  LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           L   ++Y + GGKK R         +++  +   + N   +  +G  +E +  Y L+ DD
Sbjct: 85  LAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAYQLVLDD 144

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLS 149
           +  MDN   RRG+P  + +++++  +   +G+L     +++I   K   KD      +L 
Sbjct: 145 I--MDNAITRRGRPCWY-RHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYYTHILE 198

Query: 150 LTHNIGLQGMLGGQMLDIQ----------DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           L  ++ ++  +G Q LD+           +++  E    ++ K KT A   F       M
Sbjct: 199 LFFDVTMKTAMG-QCLDMLTANSFKSKKLEKYTMENYTAIV-KYKT-AYYSFFLPVCLAM 255

Query: 200 AHASQNEKERLRCFGE---NLGIIFQLADDLLDCEED 233
              + N+ E  R        +G  FQ+ DD LDC  D
Sbjct: 256 RMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|326915522|ref|XP_003204065.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Meleagris
           gallopavo]
          Length = 299

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 24/196 (12%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+L   +Y L L GK++R+ L        NV       +    E +H  SL+ DD+   D
Sbjct: 10  RILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIE--D 67

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG P  H  Y   + I   N +     E + +        + ++ +L L      
Sbjct: 68  NSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHK---- 123

Query: 157 QGMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                GQ LDI  +D +      E +  ++Q  KTG L   A     +M   S N K+ L
Sbjct: 124 -----GQGLDIYWRDTYTCPTEAEYKAMVLQ--KTGGLFGLAV---GLMQLFS-NYKKDL 172

Query: 211 RCFGENLGIIFQLADD 226
           +     LG+ FQ+ DD
Sbjct: 173 KPLLNTLGLFFQIRDD 188


>gi|151415019|gb|ABS11699.1| farnesyl diphosphate synthase [Matricaria chamomilla var. recutita]
          Length = 343

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
           K  DT+  +L+   A          +   + Y + GGK  R   V +   L     LT  
Sbjct: 12  KVYDTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVVDSYQLLKGGELTDD 71

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +  +G  IE +  Y L+  D+  MD  + RRG+P    +  +V  I A +G+L   
Sbjct: 72  EIFLSSALGWCIEWLQAYFLVLGDI--MDESHTRRGQPC-WFRLPKVGMIAANDGILLRN 128

Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---- 179
                 P+  LK++ R +     ++ L + +  Q    GQM+D+    + E  +      
Sbjct: 129 ----HVPRI-LKNHFRGKPYYVDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLS 182

Query: 180 ----IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
               I + KT     +   + A++      +K   ++     +G  FQ+ DD LDC
Sbjct: 183 VHRRIVQYKTAYYSFYLPVAXALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDC 238


>gi|126438016|ref|YP_001073707.1| polyprenyl synthetase [Mycobacterium sp. JLS]
 gi|126237816|gb|ABO01217.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
          Length = 374

 Score = 42.0 bits (97), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 28/179 (15%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---------------- 114
            ALR  A+ + +H ++L+ DD+  MD+  +RRG+P  H+++ +                 
Sbjct: 92  AALRAAASFDLLHVFALLQDDV--MDDSPLRRGRPAAHVRFAQWHRDNGLNGSAERFGAS 149

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFID 173
            A++ G+  L +A +++   ++ L D     L  +      ++  L  GQ  D+ ++   
Sbjct: 150 AAVLLGDLCLVWAGQMMR--ESGLGDR---ALARAWPRYDAMRTELAVGQFADLVNDAGG 204

Query: 174 ET---QVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 V  + + K+G        E G  +A   +     L  +G  +G  FQL DDLL
Sbjct: 205 RPTLEDVLDVARRKSGNYTVRRPLEIGGALAGCPEATLGLLGRYGAAVGEAFQLRDDLL 263


>gi|71041845|pdb|1WL1|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima H74a Mutant
 gi|71041846|pdb|1WL1|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima H74a Mutant
          Length = 299

 Score = 42.0 bits (97), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 16/143 (11%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRGK T++  Y +  A+ AG+ +L  AF  +     ++ +N   +L  
Sbjct: 80  HDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVSAFHTVE----EIGNN---KLRR 130

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +  + IG   M   ++++    +  I + +   I + K+GAL   A +  A++       
Sbjct: 131 AFLNVIG--KMSEAELIEQLSRYKPITKEEYLRIVEGKSGALFGLALQLPALLEGELG-- 186

Query: 207 KERLRCFGENLGIIFQLADDLLD 229
            E L   G  +G I+Q+ DD++D
Sbjct: 187 -EDLYNLGVTIGTIYQMFDDIMD 208


>gi|50292709|ref|XP_448787.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528100|emb|CAG61757.1| unnamed protein product [Candida glabrata]
          Length = 351

 Score = 42.0 bits (97), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 29/212 (13%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLF----------NVNHLTALRVGAAIECIHCYSLIHD 90
           S++ Y   GGK  R   V +  ++           +  +     +G  IE +  Y L+ D
Sbjct: 40  SSLNYNTPGGKLNRGLSVVDTYAILKGYESVDDMKDDEYKKVALLGWCIELLQAYFLVAD 99

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MD    RRG+P  + +   V  I   +  +  A  I    K   +++     +L L
Sbjct: 100 DM--MDKSITRRGQPCWY-RVKNVNEIAINDAFMLEA-AIYVLLKKHFRNDSYYVDLLEL 155

Query: 151 THNIGLQGMLGGQMLDI---QDEFIDETQVFMIQK------MKTGALMCFACESGAIMAH 201
            H++  Q  LG Q+LD+    ++ +D ++ F + K       KT A   F       M  
Sbjct: 156 FHDVTFQTELG-QLLDLITAPEDHVDLSK-FSLSKHSFIVIFKT-AYYSFYLPVALAMYA 212

Query: 202 ASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
           A  N+ + L+   +    LG  FQ+ DD LDC
Sbjct: 213 AGVNDSKDLKQAQDVLIPLGEYFQIQDDYLDC 244


>gi|117164789|emb|CAJ88338.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC
           23877]
          Length = 352

 Score = 42.0 bits (97), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG----GKKIRS-FLVTECASLFNVNH 69
           R+D +L   + + A H+     D  L+ +   L G    GK++R+ F      +    + 
Sbjct: 13  RVDGVLRSYVDEEAGHLVA--VDDALAPVAEQLRGAAGHGKRLRAAFCYWGWRAAGQPDD 70

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              +R  AA+E +H  +++HDDL  +D+  +R G PT H+  + V
Sbjct: 71  DALVRAAAAMELVHAAAIVHDDL--IDDSPLRHGLPTAHVALEAV 113


>gi|330961585|gb|EGH61845.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 116

 Score = 42.0 bits (97), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDMSG--MRRGRSTAN 100

Query: 109 IQYDEVTAIIAGNGL 123
             +    +++ G+ L
Sbjct: 101 ALWGNAPSVLVGDFL 115


>gi|311895558|dbj|BAJ27966.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 368

 Score = 42.0 bits (97), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 71/175 (40%), Gaps = 50/175 (28%)

Query: 88  IHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEI- 130
           +HDDL  MD    RRG P VH                 QY    A++ G+ LL +  E+ 
Sbjct: 98  VHDDL--MDRSDTRRGLPAVHRRFENLHRAGGWRGDREQYGASAAVLLGDLLLIWCDELF 155

Query: 131 ---------ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMI 180
                    +SS K    D +R+++ML             GQ LD+ +    D T    +
Sbjct: 156 QCSGLPTGAVSSAKPVF-DLMRTEVML-------------GQYLDVLEPVAGDSTDADAL 201

Query: 181 QKMKT-------GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            + +T          +    + GA++A A  +  + L  FG  LG  FQL DDLL
Sbjct: 202 DRARTVLHYKSAKYTIERPLQVGALLAGAGPDLVDALGGFGLPLGEAFQLRDDLL 256


>gi|4894899|gb|AAD32648.1| farnesyl diphosphate synthase [Artemisia annua]
          Length = 343

 Score = 42.0 bits (97), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 26/235 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
           K  DT+  +L+   A          +   + Y + GGK  R   V +   L     L+  
Sbjct: 12  KVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLKGGELSDD 71

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +  +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G+L   
Sbjct: 72  EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLLKVGMIAANDGILLRN 128

Query: 128 FEIISSPKTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM----- 179
                 P+  LK + R +   + L    N G+     GQM+D+    + E  +       
Sbjct: 129 ----HVPRI-LKKHFRGKPYYVDLVDLFNEGVIQTASGQMIDLIPTLVGEKDLSKYSLSI 183

Query: 180 ---IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
              I + KT     +   + A++      +K   ++     +G  FQ+ DD LDC
Sbjct: 184 HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDC 238


>gi|12848440|dbj|BAB27955.1| unnamed protein product [Mus musculus]
 gi|13905030|gb|AAH06798.1| Ggps1 protein [Mus musculus]
 gi|148700811|gb|EDL32758.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Mus musculus]
          Length = 236

 Score = 42.0 bits (97), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   RY L L GK++RS L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++QK  TG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDTYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
              + LG+ FQ+ DD
Sbjct: 175 PLLDTLGLFFQIRDD 189


>gi|313237864|emb|CBY12994.1| unnamed protein product [Oikopleura dioica]
          Length = 349

 Score = 42.0 bits (97), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +L  ++ Y L GGK  R  + ++     A    V+   AL +G A+EC+    L+ DD+ 
Sbjct: 46  QLEKSLEYNLSGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDDI- 104

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MD+   RRG+   +   D    ++A N  L+    +    ++ L D +    ++ L   
Sbjct: 105 -MDSSVTRRGRACWYKNQD--VGLMAINDALSIEMCVYILLRS-LPDYVPVDKLVELFEW 160

Query: 154 IGLQGMLGGQMLDIQDE---------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             +   +G Q LD+Q+          F ++T   ++ K KT     +   +  ++A    
Sbjct: 161 ATIITEMG-QTLDMQNSECAHVDLSHFTEDTYSAIV-KYKTSVYSFYLPIASGLVAAGQD 218

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
           +   +L+     +G  FQ  DD +DC
Sbjct: 219 SNCSQLKEITLQMGHYFQAQDDFIDC 244


>gi|325290814|ref|YP_004266995.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966215|gb|ADY56994.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 313

 Score = 42.0 bits (97), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            ++KD   +  + S+ + +G++  +G   ++L    E I+  Q F + + K+G+L   AC
Sbjct: 118 ARIKDRSLAIQICSIFNCMGIRASVGQYQEVLYGISEQIELDQYFELIRQKSGSLTAAAC 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + G +M  A ++   +L  FG N GI+ Q+++DL D
Sbjct: 178 KIGGVMGRAPESIVLKLEEFGANYGIMNQISNDLND 213


>gi|108802037|ref|YP_642234.1| polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119871189|ref|YP_941141.1| polyprenyl synthetase [Mycobacterium sp. KMS]
 gi|108772456|gb|ABG11178.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119697278|gb|ABL94351.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
          Length = 374

 Score = 42.0 bits (97), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 2/41 (4%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            ALR  A+ + +H ++L+ DD+  MD+  +RRG+P  H+++
Sbjct: 92  AALRAAASFDLLHVFALLQDDV--MDDSPLRRGRPAAHVRF 130


>gi|15236002|ref|NP_193452.1| FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2);
           dimethylallyltranstransferase/ geranyltranstransferase
           [Arabidopsis thaliana]
 gi|13431525|sp|Q43315|FPPS2_ARATH RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase
           2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 2; AltName:
           Full=Dimethylallyltranstransferase 2; AltName:
           Full=Farnesyl diphosphate synthase 2; AltName:
           Full=Geranyltranstransferase 2
 gi|1146161|gb|AAB07247.1| farnesyl diphosphate synthase [Arabidopsis thaliana]
 gi|1146163|gb|AAB07248.1| farnesyl diphosphate synthase [Arabidopsis thaliana]
 gi|2245078|emb|CAB10500.1| dl4630c [Arabidopsis thaliana]
 gi|7268470|emb|CAB80990.1| AT4g17190 [Arabidopsis thaliana]
 gi|18176350|gb|AAL60028.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis
           thaliana]
 gi|21436457|gb|AAM51429.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis
           thaliana]
 gi|332658460|gb|AEE83860.1| farnesyl diphosphate synthase 2 [Arabidopsis thaliana]
          Length = 342

 Score = 42.0 bits (97), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 32/240 (13%)

Query: 16  IDTILDDLLLQTAS----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-- 69
           + ++L   LLQ  S    H   Q  +R+L    Y + GGK  R   V +   L       
Sbjct: 11  VYSVLKSDLLQDPSFEFTHESRQWLERMLD---YNVRGGKLNRGLSVVDSYKLLKQGQDL 67

Query: 70  -----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                  +  +G  IE +  Y L+ DD+  MDN   RRG+P    +  +V  I   +G+L
Sbjct: 68  TEKETFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQP-CWFRKPKVGMIAINDGIL 124

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ- 181
                I    K   ++      ++ L + +  Q   G QM+D+   F  E  +  + +Q 
Sbjct: 125 LRN-HIHRILKKHFREMPYYVDLVDLFNEVEFQTACG-QMIDLITTFDGEKDLSKYSLQI 182

Query: 182 -----KMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                + KT     +   AC    +MA  +      ++    ++GI FQ+ DD LDC  D
Sbjct: 183 HRRIVEYKTAYYSFYLPVAC--ALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFAD 240


>gi|160893233|ref|ZP_02074021.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50]
 gi|156865316|gb|EDO58747.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50]
          Length = 127

 Score = 42.0 bits (97), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 36/54 (66%)

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           Q+  + + KTGAL+  +   GA++A A+++E +++     ++G+ FQ+ DDLLD
Sbjct: 5   QLHFVYENKTGALIEASMMIGAVLAGATEDELKQVEMIASDIGLAFQIQDDLLD 58


>gi|284991729|ref|YP_003410283.1| polyprenyl synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064974|gb|ADB75912.1| Polyprenyl synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 375

 Score = 42.0 bits (97), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 26/169 (15%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGL 123
           E +H  +L+HDD+  MD    RRG+P  H+ +                    AI+ G+  
Sbjct: 102 EFVHASALVHDDV--MDGALTRRGRPATHVGFAARHGDGELAGDGDTFGIGAAILVGDLA 159

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180
           L ++ E++           R++ +           +  GQ LD+               +
Sbjct: 160 LVWSDELLRRSGISTAALSRARTVWDTMRTE----VTAGQYLDLLRAAGGLPGAQGALTV 215

Query: 181 QKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            + K+ G  +    + GA +A A     E     G  LG  FQL DD+L
Sbjct: 216 ARYKSAGYTVQRPLQLGAAIAGAGPRAAEVYTAIGLPLGEAFQLRDDVL 264


>gi|313222092|emb|CBY39100.1| unnamed protein product [Oikopleura dioica]
          Length = 349

 Score = 42.0 bits (97), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +L  ++ Y L GGK  R  + ++     A    V+   AL +G A+EC+    L+ DD+ 
Sbjct: 46  QLEKSLEYNLSGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDDI- 104

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MD+   RRG+   +   D    ++A N  L+    +    ++ L D +    ++ L   
Sbjct: 105 -MDSSVTRRGRACWYKNQD--VGLMAINDALSIEMCVYILLRS-LPDYVPVDKLVELFEW 160

Query: 154 IGLQGMLGGQMLDIQDE---------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             +   +G Q LD+Q+          F ++T   ++ K KT     +   +  ++A    
Sbjct: 161 ATIITEMG-QTLDMQNSECAHVDLNHFTEDTYSAIV-KYKTSVYSFYLPIASGLVAAGQD 218

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
           +   +L+     +G  FQ  DD +DC
Sbjct: 219 SNCSQLKEITLQMGHYFQAQDDFIDC 244


>gi|285013665|gb|ADC32809.1| farnesyl pyrophosphate synthase [Medicago sativa]
          Length = 342

 Score = 42.0 bits (97), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 28/215 (13%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86
           Q  DR+L    Y + GGK  R         L+ E  +L +     A  +G  IE +  Y 
Sbjct: 33  QWVDRMLD---YNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFQASALGWCIEWLQAYF 89

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MDN + RRG+P    +  +V  I A +G+L     I    +   K       
Sbjct: 90  LVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-HIPRILRKHFKGKPYYVE 145

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF---ACES 195
           +L L + +  Q    GQM+D+      E  +          I + KT     +   AC  
Sbjct: 146 LLDLFNEVEFQTA-AGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVAC-- 202

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +MA    +    ++     +G  FQ+ DD LDC
Sbjct: 203 ALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDC 237


>gi|299538243|ref|ZP_07051528.1| transcriptional regulator of comG and srfA [Lysinibacillus
           fusiformis ZC1]
 gi|298726445|gb|EFI67035.1| transcriptional regulator of comG and srfA [Lysinibacillus
           fusiformis ZC1]
          Length = 300

 Score = 42.0 bits (97), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 20/165 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +V AAIE +     I DDL   D+ Y     P + +       I+A   +   +FE    
Sbjct: 65  KVAAAIELLILSFDIIDDLQDKDSDYSWNKTPELSLNVALAMLIMASKTIDETSFE---- 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                      +  + L +   L+  + GQ LD+ +   DE     +  +K+G+L    C
Sbjct: 121 ---------HKRAAIKLVNEYALKS-INGQQLDLLNSCRDEDSYVKMITLKSGSLTAMGC 170

Query: 194 ESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             G ++A    SQ  +E    +G+ +GII Q+ +D+   +   PK
Sbjct: 171 LVGEVLAKGVISQEVEE----YGKYIGIIQQIKNDIQSLKVWGPK 211


>gi|297800392|ref|XP_002868080.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313916|gb|EFH44339.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 342

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 32/240 (13%)

Query: 16  IDTILDDLLLQTAS----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-- 69
           + +IL   LLQ  S    H   Q  +R+L    Y + GGK  R   V +   L       
Sbjct: 11  VYSILKSDLLQDPSFEFTHESRQWLERMLD---YNVRGGKLNRGLSVVDSYKLLKQGQDL 67

Query: 70  -----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                  +  +G  IE +  Y L+ DD+  MDN   RRG+P    +  +V  I   +G+L
Sbjct: 68  TEKETFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQP-CWFRKPKVGMIAINDGIL 124

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQ- 181
                I    K   ++      ++ L + +  Q   G QM+D+   F  E  +  + +Q 
Sbjct: 125 LRN-HIHRILKKHFREMPYYVDLVDLFNEVEFQTACG-QMIDLITTFDGEKDLSKYSLQI 182

Query: 182 -----KMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                + KT     +   AC    +MA  +      ++    ++GI FQ+ DD LDC  D
Sbjct: 183 HRRIVQYKTAYYSFYLPVAC--ALLMAGENLENHTDVKNVLVDMGIYFQVQDDYLDCFAD 240


>gi|225709438|gb|ACO10565.1| Geranylgeranyl pyrophosphate synthetase [Caligus rogercresseyi]
          Length = 303

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL    Y L   GK IR  L+T   S   +   T  ++   I+ +H  SL+ DD+   D+
Sbjct: 18  LLEPFTYLLQAKGKNIRKKLLTAFNSWLKIPSDTLNKISDIIQMLHNASLLLDDIE--DS 75

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           G +RRG P     + E + I   N ++  A E +          + S+ +L L    G++
Sbjct: 76  GILRRGIPVSRKIFGEPSTINCANYVMFIALEKVIELNHPSAAKVFSEQLLELHRGQGME 135

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L         +M   S  E   ++   E
Sbjct: 136 -------IYWRDNYQCPTEKEYRQMCIRKTGGLFALGVR---LMQLFSSEEGNYIQLV-E 184

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 185 LLGLYFQIRDDF 196


>gi|254821741|ref|ZP_05226742.1| IdsA2_2 [Mycobacterium intracellulare ATCC 13950]
          Length = 359

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 28/172 (16%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGN 121
           + E +H ++L+ DD+  MD   +RRG+P+ H Q                + E  AI+ G+
Sbjct: 84  SFELVHAFALLQDDV--MDGSDVRRGRPSAHRQFGRWHRERGLPGASRRFGESAAILLGD 141

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQ---V 177
             L +A +++       +     +L L+      ++  L  GQ  D+ ++         V
Sbjct: 142 LCLIWAEQMLRDSGIDPR-----RLQLAWPRYDAMRTELAVGQFADLINDARQAPGLEFV 196

Query: 178 FMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             + + K+G        E GA MA    +   +L  +G  +G  FQL DD+L
Sbjct: 197 LDVARRKSGNYTVRRPLEIGAAMAGCGAHTLCQLGRYGRAVGEAFQLRDDVL 248


>gi|207347806|gb|EDZ73868.1| YBR003Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 256

 Score = 41.6 bits (96), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSIS 233


>gi|83768519|dbj|BAE58656.1| unnamed protein product [Aspergillus oryzae]
          Length = 312

 Score = 41.6 bits (96), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 21/195 (10%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           D LLS+      GGK IR  L+        +    A  +   +  +H  SL+ DD+   D
Sbjct: 31  DYLLSS------GGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLIDDI--QD 82

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKP  H  +     I + N     A + +SS  +   +++  + +L+L    G+
Sbjct: 83  SSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNLHRGQGM 142

Query: 157 QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                   L  +D      E Q   +   KTG L   A +    +     N+        
Sbjct: 143 D-------LHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVK----LMQLESNQTCDCIPLT 191

Query: 215 ENLGIIFQLADDLLD 229
             LG IFQ+ DD+L+
Sbjct: 192 NTLGTIFQIRDDILN 206


>gi|255587638|ref|XP_002534338.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
 gi|223525465|gb|EEF28044.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
          Length = 333

 Score = 41.6 bits (96), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 35/242 (14%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNH------- 69
           +IL   LL+  +   T  +   ++  + Y + GGK  R   V +   L            
Sbjct: 13  SILKKQLLEDPAFEWTPDSREWVNRMLDYNVPGGKLNRGLSVIDSYQLLKEGQELTEEEI 72

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A  +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G+L     
Sbjct: 73  FLASALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-- 127

Query: 130 IISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------ 179
               P+  LK++ R +     +L L + +  Q    GQM+D+      E  +        
Sbjct: 128 --HIPRI-LKNHFRGKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSKYTLSLH 183

Query: 180 --IQKMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             I + KT     +   AC    +MA  + ++   ++    ++GI FQ+ DD LDC  D 
Sbjct: 184 RRIVQYKTAYYSFYLPVAC--ALLMAGENLDDHIDVKNILVDMGIYFQVQDDYLDCFGD- 240

Query: 235 PK 236
           PK
Sbjct: 241 PK 242


>gi|156847950|ref|XP_001646858.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117539|gb|EDO19000.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 352

 Score = 41.6 bits (96), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 27/172 (15%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  +E +  Y L+ DD+  MD    RRG+P  +   D       G   +  AF + ++ 
Sbjct: 85  LGWCVELLQAYFLVADDM--MDKSITRRGQPCWYRVED------VGEIAINDAFMLEAAI 136

Query: 135 KTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQK----- 182
              LK   RS+     ++ L H++  Q  +G Q+LD+    +E +D ++ F ++K     
Sbjct: 137 YELLKKYFRSESYYIDLIELFHDVTFQTEMG-QLLDLITAPEESVDLSK-FSLEKHSFIV 194

Query: 183 -MKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
             KT A   F       M  A  ++ + L+   +    LG  FQ+ DD LDC
Sbjct: 195 IFKT-AYYSFYLPVALAMYVAGNHDPKDLKQAQDVLIPLGEYFQIQDDYLDC 245


>gi|326435055|gb|EGD80625.1| quemao protein [Salpingoeca sp. ATCC 50818]
          Length = 328

 Score = 41.6 bits (96), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 23/185 (12%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + GK IRS L+        V      ++ +  + +H  SL+ DD+   DN  +RRG P  
Sbjct: 38  IPGKDIRSQLIQAFNLWLKVPDDKLSKIKSVTKILHNASLLIDDI--EDNSKLRRGIPVA 95

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  Y     I   N +   A   I++        + +  +L L           GQ +DI
Sbjct: 96  HSVYGVAQTINCANYMYFKAMAEIAALGHPDAAQVFTDQLLELHR---------GQGMDI 146

Query: 168 --QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             +D F+    DE +  +++  KTG L   A +   + +  S++    L  F    G+ F
Sbjct: 147 YWRDAFVCPTEDEYRTMVLR--KTGGLFQLAVQIMQLFSDDSRDYTPLLNAF----GLYF 200

Query: 222 QLADD 226
           Q+ DD
Sbjct: 201 QIRDD 205


>gi|323306067|gb|EGA59801.1| Coq1p [Saccharomyces cerevisiae FostersB]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNXAFTNKMAVLAGDFLLGRATVSIS 233


>gi|224047852|ref|XP_002194762.1| PREDICTED: similar to geranylgeranyl pyrophosphate synthetase
           [Taeniopygia guttata]
          Length = 299

 Score = 41.6 bits (96), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 24/196 (12%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           R+L   +Y L L GK++R+ L        NV       +    E +H  SL+ DD+   D
Sbjct: 10  RILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIDVTEMLHNASLLVDDIE--D 67

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRG P  H  Y   + I   N +     E + +        + ++ +L L      
Sbjct: 68  NSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHK---- 123

Query: 157 QGMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                GQ LDI  +D +      E +  ++Q  KTG L   A     +M   S N K+ L
Sbjct: 124 -----GQGLDIYWRDTYTCPTEAEYKAMVLQ--KTGGLFGLAV---GLMQLFS-NYKKDL 172

Query: 211 RCFGENLGIIFQLADD 226
           +     LG+ FQ+ DD
Sbjct: 173 KPLLNTLGLFFQIRDD 188


>gi|403318|emb|CAA81272.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae]
 gi|1582566|prf||2118405G hexaprenyl pyrophosphate synthetase
          Length = 285

 Score = 41.6 bits (96), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSIS 233


>gi|304389368|ref|ZP_07371333.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315656626|ref|ZP_07909513.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|304327486|gb|EFL94719.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315492581|gb|EFU82185.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 361

 Score = 41.6 bits (96), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 30/177 (16%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----------QYDEVTAIIAGN 121
           L +GA++E     +L+HDD+  +DN   RRG P   I           ++ +  AI+ G+
Sbjct: 79  LDLGASLELFQTSALVHDDI--IDNAIKRRGLPAAQIAFMTSFPMGGPRFGDSAAILWGD 136

Query: 122 GLLTYAFEIISSPKTQLK-DNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
            L   A    S   + L  +N    S   +++   +       GQ LD+  E  +     
Sbjct: 137 LLYAAANSYFSQAISTLSVENAHRASNFFVTMQAEVAY-----GQFLDLSAETRELSPDM 191

Query: 174 ----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
               E  + +I+       +      GA +  AS +  E+L  F   LG+ +QL DD
Sbjct: 192 PPSREAAMEIIKHKTARYSVVIPLLLGAALRGASDSLIEQLEGFATPLGVAYQLRDD 248


>gi|238490280|ref|XP_002376377.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
           flavus NRRL3357]
 gi|317145287|ref|XP_001820658.2| farnesyltranstransferase [Aspergillus oryzae RIB40]
 gi|220696790|gb|EED53131.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
           flavus NRRL3357]
          Length = 320

 Score = 41.6 bits (96), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 21/195 (10%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           D LLS+      GGK IR  L+        +    A  +   +  +H  SL+ DD+   D
Sbjct: 39  DYLLSS------GGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLIDDI--QD 90

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGKP  H  +     I + N     A + +SS  +   +++  + +L+L    G+
Sbjct: 91  SSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNLHRGQGM 150

Query: 157 QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                   L  +D      E Q   +   KTG L   A +    +     N+        
Sbjct: 151 D-------LHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVK----LMQLESNQTCDCIPLT 199

Query: 215 ENLGIIFQLADDLLD 229
             LG IFQ+ DD+L+
Sbjct: 200 NTLGTIFQIRDDILN 214


>gi|119331238|ref|NP_001073269.1| geranylgeranyl pyrophosphate synthase [Bos taurus]
 gi|143811398|sp|P56966|GGPPS_BOVIN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|111305299|gb|AAI20314.1| Geranylgeranyl diphosphate synthase 1 [Bos taurus]
 gi|296472248|gb|DAA14363.1| geranylgeranyl pyrophosphate synthetase [Bos taurus]
          Length = 300

 Score = 41.6 bits (96), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
              + LG+ FQ+ DD
Sbjct: 175 PLLDTLGLFFQIRDD 189


>gi|241955823|ref|XP_002420632.1| geranylgeranyl diphosphate synthase, putative; geranylgeranyl
           pyrophosphate synthetase, putative; [includes:
           dimethylallyltranstransferase (ec 2.5.1.1)
           geranyltranstransferase (ec 2.5.1.10);
           farnesyltranstransferas (ec 2.5.1.29)] [Candida
           dubliniensis CD36]
 gi|223643974|emb|CAX41714.1| geranylgeranyl diphosphate synthase, putative [Candida dubliniensis
           CD36]
          Length = 332

 Score = 41.6 bits (96), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 21/168 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF---EI 130
           ++   I   H  SL+ DD+   D+   RRG P  H++Y   + +  GN +   A    + 
Sbjct: 63  KISEIISVFHNSSLLIDDIE--DDSKYRRGVPVAHVKYGIPSTLNCGNLMYFVALQQAQQ 120

Query: 131 ISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQ--------DEFIDETQVFMIQ 181
           +S P   ++   + SQ+++       L  +  GQ LDI         ++  D  +   + 
Sbjct: 121 LSGPHGSMEIKFKSSQILID-----ELLNLHRGQGLDIYWRDYLKKLEKLPDVEEYLEMI 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           K KTG L   A +  ++ +   +N  ++L      +GI++Q+ DD L+
Sbjct: 176 KDKTGGLFRLAIKLLSLYSDIKEN--DQLISLANLMGILYQVRDDYLN 221


>gi|316954848|gb|EFV46383.1| decaprenyl-diphosphate synthase subunit 1 [Trichinella spiralis]
          Length = 146

 Score = 41.6 bits (96), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD-CEED 233
           KTG+L   + ++ A++A+ S+   + +  FG N G++FQL DDLLD C  D
Sbjct: 65  KTGSLFSNSLKAAAVLANCSELCVKNVYQFGRNFGLMFQLVDDLLDFCSVD 115


>gi|281346909|gb|EFB22493.1| hypothetical protein PANDA_021734 [Ailuropoda melanoleuca]
          Length = 284

 Score = 41.6 bits (96), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 23/188 (12%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y+L+ GK++R+ L         V       +    E +H  SL+ DD+   DN  +RRG 
Sbjct: 3   YSLISGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRRGF 60

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P  H  Y   + I + N +     E + +        + +  +L L           GQ 
Sbjct: 61  PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQ---------GQG 111

Query: 165 LDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+     LG
Sbjct: 112 LDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLKPLLNTLG 165

Query: 219 IIFQLADD 226
           + FQ+ DD
Sbjct: 166 LFFQIRDD 173


>gi|329941631|ref|ZP_08290896.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
 gi|329299348|gb|EGG43248.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
          Length = 337

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)

Query: 43  IRYALLGGKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +R A   GK++R+ F      +    +    LR  A++E +H  + +HDDL  +D+  +R
Sbjct: 30  LRRAAAHGKRLRAAFCYWGWRAAGQPDSEALLRAAASLELVHAAATVHDDL--IDDSPLR 87

Query: 102 RGKPTVHI 109
            G PTVH+
Sbjct: 88  HGLPTVHV 95


>gi|6806915|ref|NP_034412.1| geranylgeranyl pyrophosphate synthase [Mus musculus]
 gi|6831551|sp|Q9WTN0|GGPPS_MOUSE RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|4586868|dbj|BAA76512.1| GGPP synthase [Mus musculus]
 gi|47124116|gb|AAH69913.1| Geranylgeranyl diphosphate synthase 1 [Mus musculus]
 gi|74215597|dbj|BAE21415.1| unnamed protein product [Mus musculus]
          Length = 300

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   RY L L GK++RS L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++QK  TG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDTYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
              + LG+ FQ+ DD
Sbjct: 175 PLLDTLGLFFQIRDD 189


>gi|67516745|ref|XP_658258.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4]
 gi|40746274|gb|EAA65430.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4]
 gi|259489078|tpe|CBF89051.1| TPA: Geranylgeranyl diphosphate synthase
           [Source:UniProtKB/TrEMBL;Acc:Q874I1] [Aspergillus
           nidulans FGSC A4]
          Length = 396

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 17/183 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  ++        V   +   +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 95  GKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTASLLIDDVE--DNSLLRRGIPVAHS 152

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            Y     I + N +   A + +   K+    +I  Q +L+L    G+       +    +
Sbjct: 153 IYGTAQTINSANYVYFLALQEVQKLKSPAAIDIYVQELLNLHRGQGMDLFWRDTLTCPSE 212

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG--ENLGIIFQLADD 226
           DE+++     M+   KTG L   A +   +M   S   K+   C      LG++FQ+ DD
Sbjct: 213 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESSTGKD---CVALVNVLGLVFQICDD 260

Query: 227 LLD 229
            L+
Sbjct: 261 YLN 263


>gi|119483962|ref|XP_001261884.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya
           fischeri NRRL 181]
 gi|119410040|gb|EAW19987.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya
           fischeri NRRL 181]
          Length = 357

 Score = 41.2 bits (95), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 19/192 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L++       +       +   +  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 83  GKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLLIDDI--QDSSKLRRGFPVAHS 140

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +     I + N    +A       + +LK   + + M+  T    +  +  GQ LD+  
Sbjct: 141 IFGIAQTINSANFAYFWA-------QQELKKLGKPEAMVIFTEE--MLRLHRGQGLDLYW 191

Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D      E +   +   KTG L   A +   +M   SQN K+ +    + LGIIFQ+ D
Sbjct: 192 RDSLTCPTEEEYLEMVANKTGGLFRLAIK---LMQMESQNTKDCVPLV-DLLGIIFQIRD 247

Query: 226 DLLDCEEDLPKK 237
           D  + + DL  K
Sbjct: 248 DYQNLQSDLYAK 259


>gi|4324960|gb|AAD17204.1| farnesyl diphosphate synthase [Artemisia annua]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 28/236 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
           K  DT+  +L+   A          +   + Y + GGK  R   V +   L     L+  
Sbjct: 12  KVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVVDSYQLLKGGELSDD 71

Query: 72  ----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +  +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G+L   
Sbjct: 72  EIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPC-WFRLLKVGMIAANDGILLRN 128

Query: 128 FEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---- 179
                 P+  LK + R +     ++ L + +  Q    GQM+D+    + E  +      
Sbjct: 129 ----HVPRI-LKKHFRGKPYYVDLVDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLS 182

Query: 180 ----IQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
               I + KT     +   + A++      +K   ++     +G  FQ+ DD LDC
Sbjct: 183 IHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQDDYLDC 238


>gi|89675427|gb|ABD77586.1| farnesyl diphosphate synthase [Vitis vinifera]
          Length = 176

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 14/171 (8%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G  IE +  Y L+ DD+  MDN + RRG+P    +  +V  I A +G++    +I 
Sbjct: 11  ACVLGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVILRN-QIP 66

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKM 183
              K   K       +L L + +  Q    GQM+D+      E  +          I + 
Sbjct: 67  RILKNHFKGKPYYVDLLDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSLPLHRRIVQY 125

Query: 184 KTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT     +   + A+ MA  + +    ++     +GI FQ+ DD LDC  D
Sbjct: 126 KTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 176


>gi|255945615|ref|XP_002563575.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588310|emb|CAP86415.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 732

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 20/212 (9%)

Query: 32  QTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           QTQ    +L+   Y   L  K +R  L+    S + V   + L +  A+  +H  SL+ D
Sbjct: 382 QTQQQRPVLNPYTYINSLPSKNVRQTLIAALNSWYKVPVKSLLIIEGAVNFLHNSSLLLD 441

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   D  ++RRG+P  H  +     I     L+  A  +I          + S   +S+
Sbjct: 442 DI--QDGSFLRRGRPVAHQIFGVGQTINTATYLMNEALYLI---------QMLSPSAVSV 490

Query: 151 THNIG-LQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
              I  ++ +  GQ  D+   +        Q   +   KTG L  F   S  + + A++N
Sbjct: 491 YTEIDEMRNLQLGQGRDLYWSYHTHVPTPAQYISMVDGKTGGL--FRLISRLMRSEATKN 548

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
               +  F   LG  FQ+ DD  + + ED  K
Sbjct: 549 SDLDISQFATLLGRHFQIRDDYQNLQSEDYTK 580


>gi|67623923|ref|XP_668244.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54659431|gb|EAL38008.1| hypothetical protein Chro.70416 [Cryptosporidium hominis]
          Length = 456

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 26/171 (15%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           +I+ IH  SL+HDD+  +DN  IRRGK   +  +     I+ G+ L + +   IS     
Sbjct: 187 SIQLIHSASLLHDDI--LDNSEIRRGKKAPYKIFGNKRTILLGDYLFSKSCLNIS----- 239

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLG-----GQMLDIQDEFIDET--------QVFMIQKMK 184
           L +NI +   +S+     ++G        G +++  +   D          +  +    K
Sbjct: 240 LIENINAMKCISIIAENLVKGEFSQLNGLGSLIESLNNSKDRKGLVENYFEKYLLKSYYK 299

Query: 185 TGALMCF---ACESGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLD 229
           T +L  F   AC      A+ ++   E +      G N G+ FQL DD+LD
Sbjct: 300 TASLFSFGGIACSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILD 350


>gi|325129055|gb|EGC51905.1| geranyltranstransferase [Neisseria meningitidis N1568]
          Length = 143

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 159 MLGGQMLDIQDEFIDETQVFMIQ--KMKTGALMCFACESGAIM-AHASQNEKERLRCFGE 215
           M GGQ +D+ +      Q  + Q   +KTGAL+  A   GA+   + S++    L  +  
Sbjct: 1   MAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDAYAA 60

Query: 216 NLGIIFQLADDLLDCEED 233
            LG+ FQ+ DD+LDCE D
Sbjct: 61  KLGLAFQVIDDVLDCEAD 78


>gi|327292126|ref|XP_003230771.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial
           [Anolis carolinensis]
          Length = 137

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 11/77 (14%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE---------I 130
           E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+ +L  A +         I
Sbjct: 30  EMIHTASLVHDDV--IDDANSRRGKLTVNHVWGERKAVLAGDFILAVASQTLARIGNTTI 87

Query: 131 ISSPKTQLKDNIRSQLM 147
           +S     ++D +R + +
Sbjct: 88  VSVLTRAIEDLVRGEFL 104


>gi|291402146|ref|XP_002717392.1| PREDICTED: geranylgeranyl diphosphate synthase 1 [Oryctolagus
           cuniculus]
          Length = 300

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
              + LG+ FQ+ DD
Sbjct: 175 PLLDTLGLFFQIRDD 189


>gi|260905289|ref|ZP_05913611.1| Polyprenyl synthetase [Brevibacterium linens BL2]
          Length = 401

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 38/211 (18%)

Query: 49  GGKKIRSFLVTECASLFNVN--HLTALRVGAA-----IECIHCYSLIHDDLPSMDNGYIR 101
           GGK IR  L+     L + +    +AL  G A     +E +H  +LIHDD+  +D+   R
Sbjct: 75  GGKMIRPVLLWWGFQLASGDDSSRSALNGGVAEAAGSLELLHAAALIHDDV--IDHSDTR 132

Query: 102 RGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           RGKP +H Q++                   AI+ G+  L  + E+    ++ L     ++
Sbjct: 133 RGKPALHRQFESRHSERRFQGGAEPFGVAAAIVIGDICLALSEELFEKSQSVLGITPSAR 192

Query: 146 -LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV----FMIQKMKTGALMCFACESGAI 198
            L  +L  ++     + GQ LD+  E +  D+ ++    + +   K+             
Sbjct: 193 DLRATLRRDV-----MVGQYLDVLAEVVPLDDARIGERAWEVLSFKSAKYSVEQPLLLGA 247

Query: 199 MAHASQNEK-ERLRCFGENLGIIFQLADDLL 228
               +  E+   +  FG  LG  FQL DD+L
Sbjct: 248 ALGGADEEQLAEISRFGLPLGQAFQLRDDVL 278


>gi|13383245|dbj|BAB39473.1| putative GGPP synthase 2 [Metaplexis japonica]
          Length = 128

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 12/129 (9%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
           +RRGKPT H  Y E  A++AG+ LL +AFE I++  K  L  N   +L+ +    +  +G
Sbjct: 4   LRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIVTCHKRGLILNNLLELLKNWLSVLVQKG 63

Query: 159 MLGGQMLD-------IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +L G++L        + D  I  + +   Q++     +      GAI+  A+  +  +LR
Sbjct: 64  LLQGRLLIFAPKESLMSDWNILSSYICTRQQLYWRGSVVL----GAILGGANDVQISKLR 119

Query: 212 CFGENLGII 220
            F   +G++
Sbjct: 120 KFARCIGLL 128


>gi|164661846|ref|XP_001732045.1| hypothetical protein MGL_0638 [Malassezia globosa CBS 7966]
 gi|159105947|gb|EDP44831.1| hypothetical protein MGL_0638 [Malassezia globosa CBS 7966]
          Length = 361

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 25/192 (13%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G+K R    +E        ++ A  +G  +E +  Y L+ DD+  MD    RRG P  + 
Sbjct: 75  GQKTRELTESE--------YVQAAVLGWCVELLQAYFLVADDM--MDASITRRGHPCWY- 123

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
           + D V  I   +  +  A  I    KT  K       +L L H++  Q  LG Q++D+  
Sbjct: 124 RVDGVGNIAINDAFMLEA-AIYHLLKTHFKSESYYGHLLELFHDVTFQTELG-QLIDLIT 181

Query: 168 -QDEFIDETQVFMIQKMK-----TGALMCFACESGAIMAHASQNEKERLRCFGE---NLG 218
             ++ +D ++ F  +K +       A   F       M     N++   +   +    LG
Sbjct: 182 APEDVVDLSK-FSPEKHRLIVVYKTAFYSFYLPVALAMRMCHVNDEAAFKHAQDILIPLG 240

Query: 219 IIFQLADDLLDC 230
             FQ+ DD LDC
Sbjct: 241 EYFQIQDDYLDC 252


>gi|221119260|ref|XP_002166810.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
           subunit 1 [Hydra magnipapillata]
          Length = 186

 Score = 40.8 bits (94), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 31/46 (67%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +LM  +C+S A++A+ S   ++    +G+NLG+ FQL DD LD
Sbjct: 36  KTASLMANSCKSVALLANCSSIVQDMAFEYGKNLGMAFQLVDDALD 81


>gi|10119869|dbj|BAB13491.1| ComQ [Bacillus subtilis]
 gi|291485620|dbj|BAI86695.1| quorum-sensing protein [Bacillus subtilis subsp. natto BEST195]
          Length = 287

 Score = 40.8 bits (94), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + + IE +   + I DD+   DN           ++ D   A  A   L T + ++I S 
Sbjct: 52  LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               K       +LSLT    LQ  L GQ +D+      E++   + K+K+G+L+     
Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 158 LGVYLATGEYN--ETVEEYSRYLGIVEQIAND 187


>gi|326516466|dbj|BAJ92388.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 408

 Score = 40.8 bits (94), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 35/234 (14%)

Query: 21  DDLLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSF-------LVTECASLFNVNHLT 71
           D+LL   A +       R   A  + Y + GGK  R         L+ E   + + +   
Sbjct: 81  DELLNDRAFNFDFTDETRQWVAKMLDYNVPGGKLNRGLSVIDSYMLLREGTEVDDEDFYL 140

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK------PTVHIQYDEVTAIIAGNGLLT 125
           A  +G  IE +   +L+ DD+   DN Y RR        PTV +     +AI  G  L  
Sbjct: 141 ACVLGWCIEWLQASALVLDDI--TDNAYTRRDNLCWYKLPTVGL-----SAINDGVLLKC 193

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------QDEFIDETQVF 178
           +   II   K   K+      ++ L + IGLQ  +G QMLD+       +D      Q +
Sbjct: 194 HVQAII---KRYFKEKFYFMELMELWNEIGLQTAMG-QMLDLITTHTGAKDLARYRIQGY 249

Query: 179 M-IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDC 230
             I K KT     +   + A++ + ++ ++   L+     +G+ FQ+ DD LDC
Sbjct: 250 RRIVKYKTSYYSFYPPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDC 303


>gi|116197531|ref|XP_001224577.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51]
 gi|88178200|gb|EAQ85668.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51]
          Length = 715

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 30/209 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQ--------HNDRLLSAIRYA-LLGGK 51
           +NGG+ S+   N      I   +++   SH + +          D L +  RY   L GK
Sbjct: 379 INGGVASRTATNG----IITTGIVINDDSHQEMEVVQDVPSLGTDVLEAPSRYIDSLPGK 434

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            IR   +      + V    A  V  A+  +H  SL+ DD+   D+  +RRGKP  H+ +
Sbjct: 435 GIRHKAIDALNVWYRVPPQQAAIVSKAVHLLHGASLMLDDIE--DSSRLRRGKPAAHLVF 492

Query: 112 DEVTAI-IAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGLQ------GMLGG- 162
             +  I  AG   L    E+ +S   +L+D    Q   L+ T N+          M+ G 
Sbjct: 493 GTMQTINSAGFRFLNALEELTNSKLEELQDLYVGQSYDLAWTCNLSCPTEEEYLAMVDGS 552

Query: 163 ------QMLDIQDEFIDETQVFMIQKMKT 185
                 +MLD Q +   +  V +I +  T
Sbjct: 553 LFRMLARMLDAQSDSPTKPDVVLITRFMT 581


>gi|14488053|gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x piperita]
          Length = 349

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 36/219 (16%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86
           Q  +R+L    Y + GGK  R         L+ E   L +     A  +G  IE +  Y 
Sbjct: 40  QWVERMLD---YNVPGGKLNRGLSVIDSYQLLKEGKDLTDDEVFLASALGWCIEWLQAYF 96

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MDN + RRG+P    +  +V  I   +G++     + +     LK + RS+ 
Sbjct: 97  LVLDDI--MDNSHTRRGQP-CWFKVPKVGMIAINDGII-----LRNHIPRILKKHFRSKP 148

Query: 147 ----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCF--- 191
               +L L + +  Q    GQM+D+      E  +          I + KT     +   
Sbjct: 149 YYVDLLDLFNEVEFQ-TASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPV 207

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AC    +MA  +      ++    ++GI FQ+ DD LDC
Sbjct: 208 AC--ALLMAGENLENHPTVKDVLIDMGIYFQVQDDYLDC 244


>gi|224010788|ref|XP_002294351.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220969846|gb|EED88185.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 349

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 24/192 (12%)

Query: 50  GKKIRSFLVTECASLF-NVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK +R  L+ +C  L+  V     L  V A +  +H  SL+ DD+   DN  +RRG+P  
Sbjct: 31  GKDVRGKLI-DCFQLWLGVESEGVLEEVKAIVADLHNASLLIDDIE--DNSKLRRGQPVA 87

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  +   + I   N +   A E      ++    +    ML+L           GQ  DI
Sbjct: 88  HSIFGVASVINTANYVYFMALERCFLLGSEGAMKVFVSEMLNLHR---------GQGQDI 138

Query: 168 QDEFID------ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           Q  + D      E+Q   +   KTG L   A   G + + A++ +         NLG+ F
Sbjct: 139 Q--WRDTTTCPTESQYLAMVTDKTGGLFRLAV--GLLQSFATKMKDVDFVPLVNNLGLYF 194

Query: 222 QLADDLLDCEED 233
           Q+ DDL++  ++
Sbjct: 195 QIRDDLINLADE 206


>gi|89574388|gb|ABD77411.1| geranylgeranyl diphosphate synthase [Zingiber officinale]
          Length = 112

 Score = 40.8 bits (94), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 26/35 (74%)

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           GAI+  AS ++ ERLR +  ++G++FQ+ DD+LD 
Sbjct: 9   GAIVGGASDDQIERLRKYARSIGLLFQVVDDILDV 43


>gi|186704302|dbj|BAG30960.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali]
          Length = 424

 Score = 40.8 bits (94), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 17/183 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK+ R+ ++    + F V   +   +   +  +H  SL+ DD+   DN  +RRG+P  H
Sbjct: 145 SGKEFRTLILNAFNAWFRVPPESLTIICDVVRMLHTSSLLIDDI--QDNSLLRRGRPVAH 202

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDI 167
             Y     I  GN    Y + + +    +L+ N  S L +     + L +G   GQ L  
Sbjct: 203 SIYGVAQTINTGN----YVYFLAAKELNKLR-NAASALEVFTAEMLNLHRGQ--GQELYW 255

Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--FGENLGIIFQL 223
           +D      E +   +   KTG L   A +   +M   S        C    + LG+++Q+
Sbjct: 256 RDTLKCPTEDEYLKMVSNKTGGLFRMAVK---LMQAESPAGPMAPVCDKLVQLLGLVYQI 312

Query: 224 ADD 226
           ADD
Sbjct: 313 ADD 315


>gi|1549220|dbj|BAA13462.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus]
          Length = 344

 Score = 40.8 bits (94), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 26/199 (13%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  L    A          L    A+E    + L+HDD+   D    RRG+
Sbjct: 34  YPRRGGKMLRGLLTVYSALAHGAPLEAGLETATALELFQNWVLVHDDI--EDGSEERRGR 91

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISS-------PKTQLKDNIRSQLMLSLTHNIGLQ 157
           P +H  +    A+ AG+ +    + +++        P   L +        +   ++ L 
Sbjct: 92  PALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLL 151

Query: 158 GMLGGQM-LDIQDEF--IDETQVFM--IQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             LGG   L  +D F  +    V+   +  ++ G L+       A        E+  LR 
Sbjct: 152 WTLGGTFDLRPEDYFRMVAHKAVYYTAVVPLRLGVLLVGKTPPAAY-------EEGGLR- 203

Query: 213 FGENLGIIFQLADDLLDCE 231
               LG  FQ+ DD+L+ E
Sbjct: 204 ----LGTAFQIVDDVLNLE 218


>gi|224808192|gb|ACN63187.1| farnesyl diphosphate synthase [Euphorbia pekinensis]
          Length = 342

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 34/237 (14%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALR 74
           +LL  TA          +   + Y + GGK  R   V +   L              A  
Sbjct: 18  ELLNDTAFEWSPDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKQGEELTEEEIFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I A +G++         P
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPC-WFRLPKVGMIAANDGIMLRN----HIP 130

Query: 135 KTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK 182
           +  LK + R +     +L L + +  Q    GQM+D+      E  +          I +
Sbjct: 131 RI-LKKHFRGKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLNKYTLSLHRRIVQ 188

Query: 183 MKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KT     +   AC    +MA  S +    ++     +GI FQ+ DD LDC  D PK
Sbjct: 189 YKTAYYSFYLPVAC--ALLMAGESLDNHIDVQNILVQMGIYFQVQDDYLDCYGD-PK 242


>gi|317030986|ref|XP_001392584.2| polyprenyl synthetase [Aspergillus niger CBS 513.88]
          Length = 515

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 14/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
            K  R+ L+      + V   +   +      +H  SL+ DD+   D+  +RRGKP VH 
Sbjct: 197 SKGFRNHLIDALQEWYKVPQASLAVISGVASLLHEASLMLDDI--QDDSPLRRGKPAVH- 253

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
                T    G  + +  F I ++ +  L+ +  + L+ S + +  +  +  GQ  D+Q 
Sbjct: 254 -----TIFGVGQTINSARFHINNALRLCLQLSPSASLIFSASISDQIAQLFTGQAHDLQW 308

Query: 169 ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                   E   F +   K GAL+     S  +   A+QN    L  F   +G   QL D
Sbjct: 309 ARHKSIPTEEDYFRMVDGKNGALLILI--SRLMQNEATQNRTLDLTHFMNLIGRSHQLRD 366

Query: 226 D 226
           D
Sbjct: 367 D 367


>gi|157072593|gb|ABV08819.1| farnesyl diphosphate synthetase [Salvia miltiorrhiza]
 gi|315019238|gb|ADT70780.1| farnesyl pyrophosphate synthase [Salvia miltiorrhiza]
          Length = 349

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYS 86
           Q  +R+L    Y + GGK  R   V +   L              A  +G  +E +  Y 
Sbjct: 40  QWVERMLD---YNVPGGKLNRGLSVIDSYKLLKGGKDLTDDEVFLASALGWCVEWLQAYF 96

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MDN + RRG+P    +  +V  I   +G++     + +     LK + R++ 
Sbjct: 97  LVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAINDGII-----LRNHIPRILKKHFRTKP 148

Query: 147 ----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACE 194
               +L L + +  Q    GQM+D+      E  +          I + KT     +   
Sbjct: 149 YYVDLLDLFNEVEFQ-TASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAYYSFYLPV 207

Query: 195 SGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
           + A++      EK   ++    N+GI FQ+ DD LDC
Sbjct: 208 ACALLMAGEDLEKHPTVKDVLINMGIYFQVQDDYLDC 244


>gi|122938158|gb|ABC46412.2| geranylgeranyl diphosphate synthase [Gibberella intermedia]
          Length = 392

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 18/188 (9%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L  K IR   +        V       +   I  +H  SLI D     DN  +RRGKP+ 
Sbjct: 106 LPSKGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLHNSSLIDD---FQDNSPLRRGKPST 162

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  +    AI     ++  A E       +++D +    +  +T  I    +  GQ +D+
Sbjct: 163 HTVFGPAQAINTATYVIVKAIE-------KIQDIVGHDALADVTGTIT--TIFQGQAMDL 213

Query: 168 Q---DEFIDETQVFMIQ-KMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIF 221
               +  +   Q +++    +TGAL   + E  A+ + AS ++   E L      LG  F
Sbjct: 214 WWTANAIVPSIQEYLLMVNDETGALFRLSLELLALNSEASISDSALESLSSAVSLLGQYF 273

Query: 222 QLADDLLD 229
           Q+ DD ++
Sbjct: 274 QIRDDYMN 281


>gi|150261574|pdb|2Q80|A Chain A, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261575|pdb|2Q80|B Chain B, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261576|pdb|2Q80|C Chain C, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261577|pdb|2Q80|D Chain D, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261578|pdb|2Q80|E Chain E, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261579|pdb|2Q80|F Chain F, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
          Length = 301

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 13  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 70

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 71  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 125

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 126 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 175

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 176 PLLNTLGLFFQIRDD 190


>gi|4758430|ref|NP_004828.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
 gi|83700220|ref|NP_001032354.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
 gi|332812275|ref|XP_003308874.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
           [Pan troglodytes]
 gi|332812277|ref|XP_003308875.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
           [Pan troglodytes]
 gi|332812279|ref|XP_003339061.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pan
           troglodytes]
 gi|332812283|ref|XP_003308876.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
           [Pan troglodytes]
 gi|6831549|sp|O95749|GGPPS_HUMAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|5410359|gb|AAD43050.1|AF125394_1 gerannylgeranyl pyrophosphate synthase [Homo sapiens]
 gi|12024672|gb|AAG45581.1|AF057698_1 geranylgeranyl pyrophosphate synthetase [Homo sapiens]
 gi|4520350|dbj|BAA75909.1| geranylgeranyl diphosphate synthase [Homo sapiens]
 gi|4586866|dbj|BAA76511.1| GGPP synthase [Homo sapiens]
 gi|4730813|dbj|BAA77251.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
 gi|13528915|gb|AAH05252.1| Geranylgeranyl diphosphate synthase 1 [Homo sapiens]
 gi|55960163|emb|CAI13753.1| geranylgeranyl diphosphate synthase 1 [Homo sapiens]
 gi|119590422|gb|EAW70016.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
 gi|119590423|gb|EAW70017.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
 gi|119590425|gb|EAW70019.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
 gi|261861372|dbj|BAI47208.1| geranylgeranyl diphosphate synthase 1 [synthetic construct]
 gi|312152218|gb|ADQ32621.1| geranylgeranyl diphosphate synthase 1 [synthetic construct]
          Length = 300

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|194042553|ref|XP_001924804.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Sus scrofa]
          Length = 300

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|182440724|ref|YP_001828443.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178469240|dbj|BAG23760.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 351

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 50  GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK++R+ F      +    +    +R  A++E IH  +++HDDL  +D+  +R G+PT H
Sbjct: 51  GKRLRAAFCYWGWRAAGQPDSDALVRAAASLELIHAAAVVHDDL--IDDSALRHGRPTAH 108

Query: 109 I 109
           I
Sbjct: 109 I 109


>gi|326781397|ref|ZP_08240662.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326661730|gb|EGE46576.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 351

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 50  GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK++R+ F      +    +    +R  A++E IH  +++HDDL  +D+  +R G+PT H
Sbjct: 51  GKRLRAAFCYWGWRAAGQPDSDALVRAAASLELIHAAAVVHDDL--IDDSALRHGRPTAH 108

Query: 109 I 109
           I
Sbjct: 109 I 109


>gi|309754779|gb|ADO87007.1| E,E-farnesyl diphosphate synthase [Santalum album]
          Length = 342

 Score = 40.4 bits (93), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 30/216 (13%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86
           Q  DR+L    Y + GGK  R         L+ E   L +     A  +G  IE +  Y 
Sbjct: 33  QWVDRMLD---YNVPGGKLNRGLSVIDSYELLKEGKELTDDEIFLASALGWCIEWLQAYF 89

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MD  + RRG+P    +  EV  I   +G++     I    K   K+      
Sbjct: 90  LVLDDI--MDGSHTRRGQPC-WFRLPEVGLIAVNDGIMLRN-HIPRILKKHFKNKPYYVE 145

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM-----IQKMKTGALMCFACESGAI 198
           +L L + +  Q    GQM+D+        D ++  M     I + KT     +   + A+
Sbjct: 146 LLDLFNEVEFQTT-SGQMIDLITTLEGQKDLSKYSMPIHHRIVQYKTAYYSFYLPVACAL 204

Query: 199 MAHA----SQNEKERLRCFGENLGIIFQLADDLLDC 230
           +       S  E E++      +G  FQ+ DD LDC
Sbjct: 205 LMSGENLDSHTEVEKILV---EMGTYFQVQDDYLDC 237


>gi|328768663|gb|EGF78709.1| hypothetical protein BATDEDRAFT_17386 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 365

 Score = 40.4 bits (93), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 76/200 (38%), Gaps = 25/200 (12%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK  R   V           LTA  +      G  IE +  + LI DD+  MD    RR
Sbjct: 67  GGKMNRGLTVPSALESILKRELTADELFQSQVLGWCIEFLQAFFLISDDI--MDGSLTRR 124

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+P  + +  E   ++A N        I    K   K +      L L H +  Q  LG 
Sbjct: 125 GQPCWYKK--ENVGMVAINDSFIVEAAIYQMLKKYFKTHPAYGDFLELFHEVTYQTELG- 181

Query: 163 QMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RL 210
           Q++D+          D F  E   ++++  KT A   F       M  A   E+    + 
Sbjct: 182 QLMDLITAPEGDVDLDRFSIEKHAYIVE-FKT-AYYSFYLPIALAMRLAGITEERAYIQA 239

Query: 211 RCFGENLGIIFQLADDLLDC 230
           R     LG  FQ+ DD LDC
Sbjct: 240 RDVLLPLGEYFQVQDDYLDC 259


>gi|326444518|ref|ZP_08219252.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 373

 Score = 40.4 bits (93), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 24/194 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKP--- 105
           G  +R  L+   A          L     +E +H  SL H    P  D G  RR  P   
Sbjct: 76  GGLLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPG--RRDVPGAP 133

Query: 106 ----TVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNI----RSQLMLSLTHNIG 155
                V+ +    TA++ G+  L   FE +S  + +   +D I    R Q         G
Sbjct: 134 DPRTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAG 193

Query: 156 L--QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
              +    G+ LDI+ E   ET      ++ T      AC  GA +A A     + L  +
Sbjct: 194 ATRERATAGR-LDIEAEHWLETA-----RLTTAVPFAAACRVGATLAGAPPEWTDALAVY 247

Query: 214 GENLGIIFQLADDL 227
           GE LG+  +L ++L
Sbjct: 248 GEQLGMALRLQEEL 261


>gi|294816184|ref|ZP_06774827.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328783|gb|EFG10426.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 396

 Score = 40.4 bits (93), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 24/194 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH-DDLPSMDNGYIRRGKP--- 105
           G  +R  L+   A          L     +E +H  SL H    P  D G  RR  P   
Sbjct: 99  GGLLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPG--RRDVPGAP 156

Query: 106 ----TVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNI----RSQLMLSLTHNIG 155
                V+ +    TA++ G+  L   FE +S  + +   +D I    R Q         G
Sbjct: 157 DPRTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAG 216

Query: 156 L--QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
              +    G+ LDI+ E   ET      ++ T      AC  GA +A A     + L  +
Sbjct: 217 ATRERATAGR-LDIEAEHWLETA-----RLTTAVPFAAACRVGATLAGAPPEWTDALAVY 270

Query: 214 GENLGIIFQLADDL 227
           GE LG+  +L ++L
Sbjct: 271 GEQLGMALRLQEEL 284


>gi|332236282|ref|XP_003267333.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
           [Nomascus leucogenys]
 gi|332236284|ref|XP_003267334.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
           [Nomascus leucogenys]
 gi|332236286|ref|XP_003267335.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
           [Nomascus leucogenys]
 gi|332236288|ref|XP_003267336.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
           [Nomascus leucogenys]
          Length = 300

 Score = 40.4 bits (93), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|164605010|dbj|BAF98301.1| farnesyl-diphosphate synthase [Hevea brasiliensis]
          Length = 342

 Score = 40.4 bits (93), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 38/241 (15%)

Query: 15  RIDTILDDLLLQTASHMQT----QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69
           ++ ++L   LL+  +   T    Q  +R+L    Y + GGK  R   V +   L      
Sbjct: 10  KVYSVLKQELLEDPAFEWTPDSRQWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGQE 66

Query: 70  ------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A  +G  IE +  Y L+ DD+  MD+ + RRG+P    +  +V  I A +G+
Sbjct: 67  LTEEEIFLASALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPC-WFRVPKVGLIAANDGI 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           L         P+  LK + R +     +L L + +  Q    GQM+D+     +E  +  
Sbjct: 124 LLRN----HIPRI-LKKHFRGKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEEEKDLSK 177

Query: 180 --------IQKMKTGALMCFACESGAIMAHASQNEKERL--RCFGENLGIIFQLADDLLD 229
                   I + KT A   F       +  A +N    +  +     +GI FQ+ DD LD
Sbjct: 178 YTLSLHRRIVQYKT-AYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLD 236

Query: 230 C 230
           C
Sbjct: 237 C 237


>gi|50289191|ref|XP_447025.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526334|emb|CAG59958.1| unnamed protein product [Candida glabrata]
          Length = 332

 Score = 40.4 bits (93), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  R+ L+      + ++      +   +E +H  SLI DD+   DN  +RRG    H+
Sbjct: 36  GKNFRAKLIHLFNQFYLLDENIIQTLTQIVEILHNSSLIIDDIE--DNSQLRRGVVASHM 93

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            Y    +I   N +   A +++   +    D + S  ++ +  N  L  +  GQ LDI  
Sbjct: 94  LYGVPMSINTANYMYFVAMDLL---RNLSHDAVTSNDLMKI-FNEELLYLHRGQGLDIYW 149

Query: 168 QDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +D        E   F +   KTG L     +    ++   Q +K  L   G  LGII+Q+
Sbjct: 150 RDSLPKVVPTEEMYFNMVMNKTGGLFRLTLKIMERLSEYWQGQKS-LVPLGNLLGIIYQV 208

Query: 224 ADDLLDCEE 232
            DD L+  +
Sbjct: 209 RDDYLNLTD 217


>gi|302864751|ref|YP_003833388.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302567610|gb|ADL43812.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 44/214 (20%)

Query: 47  LLGGKKIR-SFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           L GGK++R +F       +        + L   +A+E +H ++L+HDD+  MD    RRG
Sbjct: 74  LAGGKRVRPTFAYWGWRGVVGGEEPLCSVLPALSALELLHTFALVHDDV--MDASDTRRG 131

Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRS 144
            PT H                 +Y E  A++ G+  + +A  ++   + P  +L D  R 
Sbjct: 132 LPTAHRAAAARHRAAGHTGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRC 191

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGA------LMCFACE 194
              + +         + GQ LD+  E    +    +   + + KT +      L+  AC 
Sbjct: 192 YDQMRVE-------TVAGQFLDVLGENDSASWTVDRALRVARYKTASYTVQRPLLFGACL 244

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +G   A A          +G  +G  FQL DDLL
Sbjct: 245 AG---ADADDPLIAAYTRYGLAVGEAFQLRDDLL 275


>gi|219669206|ref|YP_002459641.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539466|gb|ACL21205.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 326

 Score = 40.4 bits (93), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 19/187 (10%)

Query: 49  GGKKI-RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI-RRGKPT 106
           GGK+     L+     +F  +  T +    A+E     + I DD+   DN  +  R  P 
Sbjct: 46  GGKQYPWGNLLFTIGDVFGDSQETIVHGAVAMELYALAADIFDDIEDQDNDELPWRTIPA 105

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGG 162
                    AI   N +L  +F+ +++   Q      ++I   + ++  H    + +  G
Sbjct: 106 AQ-------AINTANLILFLSFKALAAINDQALYRQANDIFQTMGITACHGQNQEFLYEG 158

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q      + I   Q F   + K+GAL    C+  A++A    +    L  FG+NLGII Q
Sbjct: 159 Q------DAITLAQYFDTARKKSGALTAGTCKLAAVLAGCDTSLILDLEKFGQNLGIISQ 212

Query: 223 LADDLLD 229
           + +DL D
Sbjct: 213 IKNDLRD 219


>gi|257079431|ref|ZP_05573792.1| polyprenyl synthetase [Enterococcus faecalis JH1]
 gi|256987461|gb|EEU74763.1| polyprenyl synthetase [Enterococcus faecalis JH1]
          Length = 201

 Score = 40.4 bits (93), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT  L   +C  GA   H+S+  +   +  G ++GI FQ+ DD+LD   D
Sbjct: 50  KTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTAD 99


>gi|154687280|ref|YP_001422441.1| ComQ [Bacillus amyloliquefaciens FZB42]
 gi|126362993|emb|CAM35811.1| competence protein ComQ [Bacillus amyloliquefaciens FZB42]
 gi|154353131|gb|ABS75210.1| ComQ [Bacillus amyloliquefaciens FZB42]
          Length = 286

 Score = 40.4 bits (93), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 18/158 (11%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-IQYDEVTAIIAGNGLLTYAFEII 131
           L +G  IE +   + I DD+   D       +P    ++ D+  ++     + T A ++I
Sbjct: 41  LDLGTGIELLILAADIFDDIQDKD-------RPNAEWMKMDQAVSLNIATLIYTIALQVI 93

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           SS   +        L+L       +Q M  GQ +D+ D  + E Q   + K K+GAL   
Sbjct: 94  SSRDPE-------GLLLKTALKYTVQAM-EGQHIDLVDNTLTENQCIEMIKKKSGALTAL 145

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           A   GA++  A++  +  +  +   +G+  QL +DL +
Sbjct: 146 ASMLGAVL--ATKRYQSDVEQYAFYIGVAAQLKNDLFE 181


>gi|297281802|ref|XP_002802154.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
           [Macaca mulatta]
 gi|297281804|ref|XP_002802155.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
           [Macaca mulatta]
 gi|297281806|ref|XP_002802156.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
           [Macaca mulatta]
 gi|297281808|ref|XP_002802157.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
           [Macaca mulatta]
          Length = 300

 Score = 40.4 bits (93), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|301105393|ref|XP_002901780.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4]
 gi|262099118|gb|EEY57170.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4]
          Length = 345

 Score = 40.4 bits (93), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 33/220 (15%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECA-SLFNVNHLT------ALRVGAAIECIHCYSLIH 89
           D +   + Y  +GGK  R   V  C  ++     LT      A  +G  IE +  + LI 
Sbjct: 35  DWVDEVVEYNCIGGKLNRGISVVHCTQAMAPGKELTPELKEKASVLGWCIEWLQAFFLIA 94

Query: 90  DDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL-- 146
           DD+  MD    RRG+P  + + + ++ AI     L  + F+I       LK + RS+   
Sbjct: 95  DDI--MDESITRRGQPCWYRKPNVKMIAINDAFLLEAFVFQI-------LKKHFRSEPYY 145

Query: 147 --MLSLTHNIGLQGMLGGQMLDIQDEFID-ETQV--FMIQKM------KTGALMCFACES 195
             ++   H++     +G Q+LD+  + +D E  +  F +++       KT     +   +
Sbjct: 146 VDLVETFHDVVFHTEIG-QLLDLTSQPLDGEVYLDRFTVERYRQIVINKTAYYTFYLSAA 204

Query: 196 GAIMAHASQNEKER--LRCFGENLGIIFQLADDLLDCEED 233
            A+  +   +E      +     +G  FQ+ DD LDC  D
Sbjct: 205 CAMFLNGVVDEASHSLAKNICVQIGEYFQIQDDFLDCYGD 244


>gi|151944962|gb|EDN63217.1| FPP synthetase [Saccharomyces cerevisiae YJM789]
          Length = 352

 Score = 40.4 bits (93), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%)

Query: 28  ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAA 78
           A  M  +  D    ++ Y   GGK  R   V +  ++ +   +  L          +G  
Sbjct: 29  AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSKKTVEQLGQEEYEKVAILGWC 88

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +  Y L+ DD+  MD    RRG+P  + +  EV  I   +  +  A  I    K+  
Sbjct: 89  IELLQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHF 144

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMC 190
           ++      +  L H +  Q  LG Q++D+     D+  +  F ++K       KT     
Sbjct: 145 RNEKYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203

Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
           +   + A+      +EK+  + R     LG  FQ+ DD LDC
Sbjct: 204 YLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245


>gi|115491941|ref|XP_001210598.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624]
 gi|114197458|gb|EAU39158.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624]
          Length = 358

 Score = 40.4 bits (93), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 15/202 (7%)

Query: 31  MQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           + +  N+R+L      LL   GK IR  L+    +   V   +   +   +  +H  SL+
Sbjct: 46  LWSAENERILMGPYDYLLQHPGKDIRRQLINAFDAWLQVPPDSLAIINKVVAMLHTSSLL 105

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
            DD+   D+  +RRG P  H  Y     I + N +   A + +         +I  + +L
Sbjct: 106 IDDVE--DSSALRRGIPVAHSIYGTAQTINSANYVYFLALQELQKLNNPAAIDIYVKELL 163

Query: 149 SLTHNIGLQGMLGGQML-DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +L    G++      +    +DE++      M+   KTG L   A +   +M   S+  K
Sbjct: 164 NLHRGQGMELFWRDTLTCPTEDEYLQ-----MVGN-KTGGLFRLAVK---LMQAESKTGK 214

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
           + +      LG+IFQ+ DD L+
Sbjct: 215 DCVSLVNV-LGLIFQICDDYLN 235


>gi|58699201|ref|ZP_00374011.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
          ananassae]
 gi|58534279|gb|EAL58468.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
          ananassae]
          Length = 69

 Score = 40.4 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 17 DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRV 75
          +T  + L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V
Sbjct: 4  ETTKNLLIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISV 63

Query: 76 GAAIE 80
           AAIE
Sbjct: 64 AAAIE 68


>gi|315501045|ref|YP_004079932.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315407664|gb|ADU05781.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 44/214 (20%)

Query: 47  LLGGKKIR-SFLVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           L GGK++R +F       +        + L   +A+E +H ++L+HDD+  MD    RRG
Sbjct: 74  LAGGKRVRPTFAYWGWRGVVGGEEPLCSVLPALSALELLHTFALVHDDV--MDASDTRRG 131

Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEII---SSPKTQLKDNIRS 144
            PT H                 +Y E  A++ G+  + +A  ++   + P  +L D  R 
Sbjct: 132 LPTAHRAAAARHRAAGHTGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRC 191

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----QVFMIQKMKTGA------LMCFACE 194
              + +         + GQ LD+  E    +    +   + + KT +      L+  AC 
Sbjct: 192 YDQMRVE-------TVAGQFLDVLGENDSASWTVDRALRVARYKTASYTVQRPLLFGACL 244

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +G   A A          +G  +G  FQL DDLL
Sbjct: 245 AG---ADADDPLIAAYTRYGLAVGEAFQLRDDLL 275


>gi|149690652|ref|XP_001492882.1| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Equus
           caballus]
          Length = 299

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL    Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYEYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + + +      + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|325283242|ref|YP_004255783.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP]
 gi|324315051|gb|ADY26166.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP]
          Length = 331

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 79/208 (37%), Gaps = 34/208 (16%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE----------CIHCYSLIHDDLPS 94
           Y   GGK IRS L+   A    +        GA  E              + LIHDD+  
Sbjct: 34  YPQRGGKGIRSELLLLSAQAHGLAE-----GGAGWERALWLAAALELFQNWVLIHDDI-- 86

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D+   RRG P +H  +    A+ AG+ L  Y +  +   K  L         L++ H  
Sbjct: 87  VDDSDERRGAPALHKLHGVPLALNAGDALHAYMWAAVQ--KAGLDAGFSE--FLTMIHRT 142

Query: 155 GLQGMLGGQMLDIQ-----DEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKE 208
                  GQ LD+      +  +       + ++KTG   +      GA+   A Q    
Sbjct: 143 A-----EGQHLDVSWVEHGEWNLQPADYLEMVRLKTGFYTIVTPLRLGALA--AGQPPHP 195

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236
                G +LG  FQ+ DD+L+   D  K
Sbjct: 196 DFEAAGLSLGTAFQIRDDVLNLTGDPAK 223


>gi|149238027|ref|XP_001524890.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451487|gb|EDK45743.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 347

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 20/205 (9%)

Query: 43  IRYALLGGKKIRS-FLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYI 100
           IR        +RS F+     + F++     L+ +   IE +H  SL+ DD+   D+   
Sbjct: 27  IRKLASNNNNVRSRFINAFNETFFHITDQEVLQLINEVIEILHNASLLIDDVE--DSSNF 84

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRG P+ H++Y     I  GN +   A E + +  + +L     +   L+L   I +  M
Sbjct: 85  RRGYPSAHMKYGVPLTINCGNLMYFEAIEKVYNLWRLKLGKEDTTLATLALVWEIVMPEM 144

Query: 160 LG---GQMLDI--QDEFIDETQVFMI------QKMKTGALMCFACESGAIMAHASQNEKE 208
                GQ LDI  +D   D   +  +       K KTG L   A     + +  S +   
Sbjct: 145 KNFHKGQGLDIYWRDNLPDLESLPSVVDYCQMAKDKTGGLFRLAVRLLRLFSSGSTHLDS 204

Query: 209 RLRCFGEN----LGIIFQLADDLLD 229
                 E+    LG+I+Q+ DD L+
Sbjct: 205 EYNGVFESIANCLGVIYQIRDDYLN 229


>gi|126460364|ref|YP_001056642.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126250085|gb|ABO09176.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 261

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 25/167 (14%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L   A +E +H  SL+ DD+  MD    RRG  T    Y +  AI+A + L+  +     
Sbjct: 69  LEAAAIVELLHVVSLLQDDV--MDQHDQRRGIKTPRAMYGDGRAIVASDWLIAESI---- 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
               ++  N+ + ++  L      Q +  GQ LD++ E  D+   F     KT  L+   
Sbjct: 123 ----KMAVNLGADVVTYLADVA--QRLSVGQALDLEGER-DKAAEF-----KTAPLI--- 167

Query: 193 CESGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLDCEEDLPK 236
            E+  +M       +E +   +  G  LGI++Q +DD  D   + P+
Sbjct: 168 -EAALVMPLVILGRRELIETAKKLGTKLGILYQYSDDYSDENVERPE 213


>gi|323308567|gb|EGA61811.1| Erg20p [Saccharomyces cerevisiae FostersO]
          Length = 352

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%)

Query: 28  ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAA 78
           A  M  +  D    ++ Y   GGK  R   V +  ++ +   +  L          +G  
Sbjct: 29  AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWC 88

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +  Y L+ DD+  MD    RRG+P  + +  EV  I   +  +  A  I    K+  
Sbjct: 89  IELLQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHF 144

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMC 190
           ++      +  L H +  Q  LG Q++D+     D+  +  F ++K       KT     
Sbjct: 145 RNEKYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203

Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
           +   + A+      +EK+  + R     LG  FQ+ DD LDC
Sbjct: 204 YLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245


>gi|50550901|ref|XP_502923.1| YALI0D17050p [Yarrowia lipolytica]
 gi|49648791|emb|CAG81114.1| YALI0D17050p [Yarrowia lipolytica]
          Length = 327

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 14/187 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G  IR  L+    ++  V+      +    + +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 32  GHNIREHLIAAFGAVIKVDKSDLETISHITKILHNSSLLVDDVE--DNSMLRRGLPAAHC 89

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +     I + N +   A + +   K+    +I ++ M++L    G+  +   + L    
Sbjct: 90  LFGVPQTINSANYMYFVALQEVLKLKSYDAVSIFTEEMINLHRGQGMD-LYWRETLTCPS 148

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER-----LRCFGENLGIIFQLA 224
           E  DE    ++   KTG L   A     +++ AS+ E        L    + LG+I+Q+ 
Sbjct: 149 E--DEYLEMVVH--KTGGLFRLALR--LMLSVASKQEDHEKINFDLTHLTDTLGVIYQIL 202

Query: 225 DDLLDCE 231
           DD L+ +
Sbjct: 203 DDYLNLQ 209


>gi|323304418|gb|EGA58189.1| Erg20p [Saccharomyces cerevisiae FostersB]
          Length = 352

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%)

Query: 28  ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAA 78
           A  M  +  D    ++ Y   GGK  R   V +  ++ +   +  L          +G  
Sbjct: 29  AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWC 88

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +  Y L+ DD+  MD    RRG+P  + +  EV  I   +  +  A  I    K+  
Sbjct: 89  IELLQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHF 144

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMC 190
           ++      +  L H +  Q  LG Q++D+     D+  +  F ++K       KT     
Sbjct: 145 RNEKYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203

Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
           +   + A+      +EK+  + R     LG  FQ+ DD LDC
Sbjct: 204 YLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245


>gi|298346921|ref|YP_003719608.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC
           43063]
 gi|298236982|gb|ADI68114.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC
           43063]
          Length = 361

 Score = 40.0 bits (92), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 30/177 (16%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----------QYDEVTAIIAGN 121
           L +GA++E     +L+HDD+  +DN   RRG P   I           ++ +  AI+ G+
Sbjct: 79  LDLGASLELFQTSALVHDDI--IDNAIKRRGLPAAQIAFMTSFPMGGPRFGDSAAILWGD 136

Query: 122 GLLTYAFEIISSPKTQLK-DNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
            L   A    S   + L  +N    S   +++   +       GQ LD+  E  +     
Sbjct: 137 LLYAAANSYFSQAISTLSVENAHRASNFFVTMQAEVAY-----GQFLDLSAETRELSPDM 191

Query: 174 ----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
               E  + +I+       +      GA +  A+ +  E+L  F   LG+ +QL DD
Sbjct: 192 PPSREAAMEIIKHKTARYSVVIPLLLGAALRGANDSLIEQLEGFATPLGVAYQLRDD 248


>gi|255937223|ref|XP_002559638.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584258|emb|CAP92291.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 369

 Score = 40.0 bits (92), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+    +   V   +   +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 82  GKDIRRQLIHAFNAWLQVPPASLSIITKVVTMLHTSSLLIDDVE--DNSVLRRGIPVAHN 139

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A + +         +I  Q ML+L    G+       +    +
Sbjct: 140 IFGTAQTINSANYVYFLALQEVQQLNNPAAIDIYVQEMLNLHRGQGMDLFWRDTLTCPTE 199

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE+++     M+   KTG L   A +   +M   S   K+ +      +G+IFQ+ DD L
Sbjct: 200 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESTTGKDCVALVNV-MGLIFQICDDYL 249

Query: 229 D 229
           +
Sbjct: 250 N 250


>gi|301792142|ref|XP_002931038.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Ailuropoda
           melanoleuca]
          Length = 300

 Score = 40.0 bits (92), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 81/195 (41%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + +  +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|2957271|gb|AAC05595.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster]
          Length = 335

 Score = 40.0 bits (92), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 32/208 (15%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++LLQ  +++Q               + GK+ RS L         +      ++G  ++
Sbjct: 21  DEILLQPFTYIQQ--------------IPGKQFRSELALAFNHWLLIPGEKLAQIGNIVQ 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ +D     N  +RRG P  H  Y   + I A N  L  A E +         
Sbjct: 67  MLHNSSLLIED-----NSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEVR 121

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D F    E+   ++   KTG L   A     +
Sbjct: 122 KVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIR---L 171

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD 226
           M   S N KE        LG+ FQ+ DD
Sbjct: 172 MQLFSSN-KEDYSKLTAILGLYFQIRDD 198


>gi|6322294|ref|NP_012368.1| Erg20p [Saccharomyces cerevisiae S288c]
 gi|120479|sp|P08524|FPPS_YEAST RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|171517|gb|AAA34606.1| farnesyl diphosphate synthetase (EC 2.5.1.1) [Saccharomyces
           cerevisiae]
 gi|1008358|emb|CAA89462.1| ERG20 [Saccharomyces cerevisiae]
 gi|190409344|gb|EDV12609.1| farnesyl diphosphate synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207344136|gb|EDZ71372.1| YJL167Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271340|gb|EEU06405.1| Erg20p [Saccharomyces cerevisiae JAY291]
 gi|285812738|tpg|DAA08636.1| TPA: Erg20p [Saccharomyces cerevisiae S288c]
 gi|290771068|emb|CAY80618.2| Erg20p [Saccharomyces cerevisiae EC1118]
 gi|323332955|gb|EGA74357.1| Erg20p [Saccharomyces cerevisiae AWRI796]
 gi|323337022|gb|EGA78278.1| Erg20p [Saccharomyces cerevisiae Vin13]
 gi|323348011|gb|EGA82269.1| Erg20p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 352

 Score = 40.0 bits (92), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%)

Query: 28  ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAA 78
           A  M  +  D    ++ Y   GGK  R   V +  ++ +   +  L          +G  
Sbjct: 29  AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWC 88

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +  Y L+ DD+  MD    RRG+P  + +  EV  I   +  +  A  I    K+  
Sbjct: 89  IELLQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHF 144

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMC 190
           ++      +  L H +  Q  LG Q++D+     D+  +  F ++K       KT     
Sbjct: 145 RNEKYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSF 203

Query: 191 FACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
           +   + A+      +EK+  + R     LG  FQ+ DD LDC
Sbjct: 204 YLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245


>gi|256390769|ref|YP_003112333.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256356995|gb|ACU70492.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 367

 Score = 40.0 bits (92), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 42/223 (18%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDL 92
           L +A+R  L GGK +R             +  TA      +   A++E +   +LIHDD 
Sbjct: 42  LPTALREFLDGGKLMRPGFCYWGWRGVLGDSATAQEEEGIVHAAASLELLQASALIHDDY 101

Query: 93  PSMDNGYIRRGKPTVHIQY------------DE----VTAIIAGNGLLTYAFEIISSPKT 136
             MD+   RRG P +H ++            DE      AI+ G+  LT+  E+ +    
Sbjct: 102 --MDDSDTRRGMPAIHRRFAAAHREAAWEGSDERFGAAAAILLGDVCLTWCDEMFAGNGL 159

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACE 194
             +    ++    +        ++ GQ LD+  Q   +DE +    Q+ +T  ++ F   
Sbjct: 160 PAERTAAARRYFDVMRTE----VMAGQYLDVLAQAHGLDEPER-AAQRAQT--VIRFKSA 212

Query: 195 S---------GAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                     GA++A   ++       +G  LG  FQL DD+L
Sbjct: 213 KYTIERPLHVGAMLAGGGKDVIAAYSAYGLPLGEAFQLRDDVL 255


>gi|46367743|dbj|BAD15361.1| farnesyl diphosphate synthase [Lactarius chrysorrheus]
          Length = 381

 Score = 40.0 bits (92), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 12/157 (7%)

Query: 18  TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
            + DDLL     H M  +  +    ++ Y + GGK  R   V +  ++     LT     
Sbjct: 37  VVRDDLLEDFRKHNMPEEAIEYYQRSMDYNVPGGKLNRGMSVVDSVAILKGRELTESEYF 96

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G A+E +  Y L+ DD+  MD    RRG+P  +    E    +A N  L     I
Sbjct: 97  QAAVLGWAVEWMQAYFLVSDDI--MDASITRRGQPCWYRT--EGVGFMAINDALILEGAI 152

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
               +   +       ++ L H +  Q  + GQ++D+
Sbjct: 153 FQMIRKHFRKEPFYVDLIDLLHEVSYQTEM-GQLVDL 188


>gi|289615531|emb|CBI57772.1| putative farnesyltranstransferase [Sordaria macrospora]
          Length = 436

 Score = 40.0 bits (92), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 13/178 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS +V    +  +V   +   +   I  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 148 GKDIRSQMVKAFNAWLDVPSESLEVITKVISMLHTASLLVDDV--EDNSVLRRGFPVAHS 205

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I   N +  +A + +   K     +I S+ +L+L    G+       +    +
Sbjct: 206 IFGIPQTINTSNYVYFHALQELQKLKNPKAVSIFSEELLNLHRGQGMDLFWRDTLTCPTE 265

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D++++     M+   KTG L       G  +  A              +G+IFQ+ADD
Sbjct: 266 DDYLE-----MVSN-KTGGLFRL----GIKLMQAESRSPVDCVPLVNIIGLIFQIADD 313


>gi|29468176|gb|AAO85432.1|AF479566_1 geranylgeranyl diphosphate synthase [Emericella nidulans]
          Length = 396

 Score = 40.0 bits (92), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 17/183 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  ++        V   +   +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 95  GKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTASLLIDDVE--DNSLLRRGIPVAHS 152

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            Y     I + N +   A + +   K+    ++  Q +L+L    G+       +    +
Sbjct: 153 IYGTAQTINSANYVYFLALQEVQKLKSPAAIDMYVQELLNLHRGQGMDLFWRDTLTCPSE 212

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG--ENLGIIFQLADD 226
           DE+++     M+   KTG L   A +   +M   S   K+   C      LG++FQ+ DD
Sbjct: 213 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESSTGKD---CVALVNVLGLVFQICDD 260

Query: 227 LLD 229
            L+
Sbjct: 261 YLN 263


>gi|66363140|ref|XP_628536.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum
           Iowa II]
 gi|46229548|gb|EAK90366.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum
           Iowa II]
          Length = 466

 Score = 40.0 bits (92), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 26/171 (15%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           +I+ IH  SL+HDD+  +DN  IRRGK   +  +     I+ G+ L + +   IS     
Sbjct: 187 SIQLIHSASLLHDDI--LDNSEIRRGKKAPYKIFGNKKTILLGDYLFSKSCLNIS----- 239

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLG-----GQMLDIQDEFIDET--------QVFMIQKMK 184
           + +NI +   +S+     ++G        G +++  +   D+         +  +    K
Sbjct: 240 IIENINAMKCISIIAENLVKGEFSQLNGLGSLIEGLNNSKDKKGLVGNYFEKYLLKSYYK 299

Query: 185 TGALMCF---ACESGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLD 229
           T +L  F   AC      A+ ++   E +      G N G+ FQL DD+LD
Sbjct: 300 TASLFSFGGIACSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMDDILD 350


>gi|326490349|dbj|BAJ84838.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326510595|dbj|BAJ87514.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 408

 Score = 40.0 bits (92), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 33/208 (15%)

Query: 45  YALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R         L+ E   + + +   A  +G  IE +   +L+ DD+   DN
Sbjct: 107 YNVPGGKLNRGLSVIDSYMLLREGTEVDDEDFYLACVLGWCIEWLQASALVLDDIT--DN 164

Query: 98  GYIRRGK------PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
            Y RR        PTV +     +AI  G  L  +   II   K   K+      ++ L 
Sbjct: 165 AYTRRDNLCWYKLPTVGL-----SAINDGVLLKCHVQAII---KRYFKEKFYFMELMELW 216

Query: 152 HNIGLQGMLGGQMLDI-------QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHAS 203
           + IGLQ  +G QMLD+       +D      Q +  I K KT     +   + A++ + +
Sbjct: 217 NEIGLQTAMG-QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGA 275

Query: 204 Q-NEKERLRCFGENLGIIFQLADDLLDC 230
           + ++   L+     +G+ FQ+ DD LDC
Sbjct: 276 KLSDYVELKNVLIEMGVYFQIQDDYLDC 303


>gi|323354370|gb|EGA86209.1| Erg20p [Saccharomyces cerevisiae VL3]
          Length = 322

 Score = 40.0 bits (92), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 24/219 (10%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAAIEC 81
           M  +  D    ++ Y   GGK  R   V +  ++ +   +  L          +G  IE 
Sbjct: 1   MPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIEL 60

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +  Y L+ DD+  MD    RRG+P  + +  EV  I   +  +  A  I    K+  ++ 
Sbjct: 61  LQAYFLVADDM--MDKSITRRGQPCWY-KVPEVGEIAINDAFMLEA-AIYKLLKSHFRNE 116

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--FMIQK------MKTGALMCFAC 193
                +  L H +  Q  LG Q++D+     D+  +  F ++K       KT     +  
Sbjct: 117 KYYIDITELFHEVTFQTELG-QLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSFYLP 175

Query: 194 ESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDC 230
            + A+      +EK+  + R     LG  FQ+ DD LDC
Sbjct: 176 VALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 214


>gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
            [Trichinella spiralis]
          Length = 1241

 Score = 40.0 bits (92), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 11/136 (8%)

Query: 5    LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
            +P  L  + KR+D   D+ +L + S   ++  + L++  +Y   + GK+IR  L      
Sbjct: 906  VPRALSTSQKRMDK--DNSMLLSLSPPASKEEEELIAPFKYICSIPGKQIRVKLGFNL-- 961

Query: 64   LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              NV++     +   +E +H  SL+ DD+   D+  +RRG P  H  Y   T +   N  
Sbjct: 962  WLNVDNEIVNAISEIVEMLHNASLMIDDIE--DSSELRRGMPVTHRIYGLPTTLNTAN-- 1017

Query: 124  LTYAFEIISSPKTQLK 139
              Y + +  S   QL+
Sbjct: 1018 --YIYFVALSKTVQLR 1031


>gi|46109712|ref|XP_381914.1| hypothetical protein FG01738.1 [Gibberella zeae PH-1]
          Length = 757

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 15/133 (11%)

Query: 14  KRIDT------ILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           K++D+       L D++LQ    M+   +D ++   RY   L  K +R+  +        
Sbjct: 432 KKVDSGADHKKTLSDIMLQELPPME---DDVVMEPYRYLCSLPSKGVRNKTIDALNFWLK 488

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V    A  + A  E +H  SL+ DD+   D+  +RRGKP+ H  + E   I +       
Sbjct: 489 VPIENANTIKAITESLHGSSLMLDDIE--DHSQLRRGKPSAHAVFGEAQTINSATFQYIQ 546

Query: 127 AFEIIS---SPKT 136
           +  +IS   SPK 
Sbjct: 547 SVSLISQLRSPKA 559


>gi|297170553|gb|ADI21581.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium
           HF0070_35E03]
          Length = 180

 Score = 39.7 bits (91), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KTG L   ACE G  +A  S+    +   FG +LGII+Q+ DDL+D
Sbjct: 13  KTGELFRAACEVGTHLAGFSKETTIQAGNFGSSLGIIYQIYDDLVD 58


>gi|145240169|ref|XP_001392731.1| farnesyltranstransferase [Aspergillus niger CBS 513.88]
 gi|134077245|emb|CAK45586.1| unnamed protein product [Aspergillus niger]
          Length = 389

 Score = 39.7 bits (91), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+        V   +   +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 103 GKDIRRQLINAFNVWLKVPPESLSIITKVVAMLHTASLLIDDV--EDNSILRRGIPVAHN 160

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            Y     I + N +   A + +         +I  Q +L+L    G+       +    +
Sbjct: 161 IYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQELLNLHRGQGMDLFWRDTLTCPSE 220

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           DE+++     M+   KTG L   A +   +M   S + K+ +      +G+IFQ+ DD L
Sbjct: 221 DEYLE-----MVGN-KTGGLFRLAVK---LMQAESSSGKDCVSLVNV-MGLIFQICDDYL 270

Query: 229 D 229
           +
Sbjct: 271 N 271


>gi|328869898|gb|EGG18273.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium fasciculatum]
          Length = 300

 Score = 39.7 bits (91), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R+ L+        V       V + ++ +H  SL+ DD+   DN  +RRG PT H 
Sbjct: 28  GKGVRALLIESFNHWLKVEDRVVKEVSSLVQSLHMSSLLIDDIE--DNSLLRRGTPTAHT 85

Query: 110 QY 111
            Y
Sbjct: 86  LY 87


>gi|89894766|ref|YP_518253.1| hypothetical protein DSY2020 [Desulfitobacterium hafniense Y51]
 gi|89334214|dbj|BAE83809.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 288

 Score = 39.7 bits (91), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 19/187 (10%)

Query: 49  GGKKI-RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI-RRGKPT 106
           GGK+     L+     +F  +  T +    A+E     + I DD+   DN  +  R  P 
Sbjct: 8   GGKQYPWGNLLFTIGDVFGDSQETIVHGAVAMELYALAADIFDDIEDQDNDELPWRTIPA 67

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL----KDNIRSQLMLSLTHNIGLQGMLGG 162
                    AI   N +L  +F+ +++   Q      ++I   + ++  H    + +  G
Sbjct: 68  AQ-------AINTANLILFLSFKALAAINDQALYRQANDIFQTMGITACHGQNQEFLYEG 120

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q      + I   Q F   + K+GAL   AC+   ++A    +    L  FG+NLGII Q
Sbjct: 121 Q------DAITLAQYFDTARKKSGALTAGACKLAGVLAGCDTSLILDLDKFGQNLGIISQ 174

Query: 223 LADDLLD 229
           + +DL D
Sbjct: 175 IKNDLQD 181


>gi|297626728|ref|YP_003688491.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922493|emb|CBL57066.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 358

 Score = 39.7 bits (91), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 39  LLSAIRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           L+   R    GGK++R    F     A     +    L   A  E +H  +L+HDDL  +
Sbjct: 45  LVGLARRFTAGGKRLRPAFCFWGHVAAGGAPADPTALLDATAGFELLHVAALVHDDL--I 102

Query: 96  DNGYIRRGKPTVHIQYDEV 114
           D+   RRG P  H Q +E+
Sbjct: 103 DDSDTRRGMPAAHRQLEEL 121


>gi|224089549|ref|XP_002308751.1| predicted protein [Populus trichocarpa]
 gi|222854727|gb|EEE92274.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score = 39.7 bits (91), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 18/167 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD+ + RRG+P    +  +V  I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDSSHTRRGQPC-WFRLPKVGLIAANDGILLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186
           K   +D      +L L + +  Q    GQM+D+      E  +          I + KT 
Sbjct: 134 KNHFRDKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
               +   AC    +MA  + +    ++     +G  FQ+ DD LDC
Sbjct: 193 YYSFYLPVAC--ALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDC 237


>gi|118486658|gb|ABK95166.1| unknown [Populus trichocarpa]
          Length = 342

 Score = 39.7 bits (91), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 18/167 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD+ + RRG+P    +  +V  I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDSSHTRRGQPC-WFRLPKVGLIAANDGILLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186
           K   +D      +L L + +  Q    GQM+D+      E  +          I + KT 
Sbjct: 134 KNHFRDKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
               +   AC    +MA  + +    ++     +G  FQ+ DD LDC
Sbjct: 193 YYSFYLPVAC--ALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDC 237


>gi|213965295|ref|ZP_03393492.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum
           SK46]
 gi|213952147|gb|EEB63532.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum
           SK46]
          Length = 370

 Score = 39.7 bits (91), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 24/148 (16%)

Query: 101 RRGKPTVHIQYDE----------------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           RRG PT+H  ++                   AI+ G+  LT+A +++ S     +   R+
Sbjct: 114 RRGAPTIHKVFEAKHEANSWNGAADRFGISAAILIGDVALTWADDMMHSSGLSSEALTRA 173

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIMA 200
            +            +LGGQ+LDI  E   +++V   +K+       +  E     GA +A
Sbjct: 174 LVPWRAMRT----EVLGGQLLDITAEASRDSRVETAEKINLFKTAAYTIERPLHIGAAIA 229

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLL 228
            A     E  R FG ++G+ FQL DD L
Sbjct: 230 GAPAELVEAYRSFGRDIGVAFQLRDDQL 257


>gi|238498722|ref|XP_002380596.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
 gi|220693870|gb|EED50215.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
          Length = 271

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 27/170 (15%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           RV +  E +H  SL+ DD+   D+  +RRG+P  H  + +   I + N LL  A + +  
Sbjct: 14  RVKSIAETLHNASLLLDDIE--DSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMDQVRQ 71

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----------QDEFIDETQVFMIQKM 183
              Q   ++  + M         + +  GQ  D+          QDE+++     MI + 
Sbjct: 72  LDNQRCMDVFVEEM---------RNLFIGQSFDLYWTRQGECPSQDEYLE-----MISQ- 116

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTG L           A    N    L      LG  FQ+ DD  +  ED
Sbjct: 117 KTGGLFRLLTRLMTEKASTQHNSTITLDSLVSLLGQYFQIRDDYKNLTED 166


>gi|62288317|gb|AAX78434.1| farnesyl diphosphate synthase [Anthonomus grandis]
          Length = 438

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 86/212 (40%), Gaps = 25/212 (11%)

Query: 38  RLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHD 90
           R+   ++Y +  GKK R   L++    L +  +LT      A  +G  +E IH   L+ D
Sbjct: 128 RVARVLQYNVPNGKKNRGLILISAYKMLEDPKNLTPENIKLASVLGWCLEMIHSCFLVLD 187

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MDN   RRG    + Q      + A N  L     + +  K  L+D+     ++ L
Sbjct: 188 DI--MDNSETRRGSLCWYRQ--NGIGLSAINDGLILENAVYTLLKMHLRDHPAYVPIIEL 243

Query: 151 THNIGLQGMLGGQMLD---------IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            H    +  LG Q LD          + E    ++   I K KT A   F       M  
Sbjct: 244 FHETVSKTTLG-QCLDSMCLDSDGKPKLEMFSMSRYTSIVKYKT-AYYSFHMPVAVAMYL 301

Query: 202 ASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
           A  N+ E+ R        +G  FQ+ DD LDC
Sbjct: 302 AGMNDPEQHRQAKTILLEMGEFFQIQDDFLDC 333


>gi|47229030|emb|CAG09545.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 299

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 20/193 (10%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L        NV       +    E +H  SL+ DD+   D+
Sbjct: 13  LLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIRVTEMLHNASLLIDDIE--DS 70

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 71  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVRVFTRQLLELHR----- 125

Query: 158 GMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
               GQ LDI  +D +    E +   +   KTG L   A     +M   S + K+ L+  
Sbjct: 126 ----GQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAV---GLMQLFS-DWKQDLKPL 177

Query: 214 GENLGIIFQLADD 226
            + LG+ FQ+ DD
Sbjct: 178 LDTLGLFFQIRDD 190


>gi|58271236|ref|XP_572774.1| farnesyltranstransferase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134114510|ref|XP_774085.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256717|gb|EAL19438.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229033|gb|AAW45467.1| farnesyltranstransferase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 322

 Score = 39.3 bits (90), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IRS L+        V+      +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 35  GKEIRSKLIDAFNQWLEVDKDDLKVITKVVRMLHNASLLMDDVE--DNSELRRGLPVAHT 92

Query: 110 QYDEVTAIIAGNGLLTYAFE 129
            Y     I A N +   AF+
Sbjct: 93  IYGVPQTINAANYVYFLAFQ 112


>gi|70992035|ref|XP_750866.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
 gi|66848499|gb|EAL88828.1| geranylgeranyl diphosphate synthase, putative [Aspergillus
           fumigatus Af293]
          Length = 787

 Score = 39.3 bits (90), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           +  K +RS ++        V+  +  ++   ++ +H  SLI DD+   DN   RRG+P  
Sbjct: 496 MPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLHNASLILDDI--EDNSPKRRGRPAT 553

Query: 108 HIQYDEVTAIIAGNGLLTYAFEI 130
           H  +    AI + N +   A ++
Sbjct: 554 HTIFGHSQAINSANFMFVQAVQV 576


>gi|294815586|ref|ZP_06774229.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294328185|gb|EFG09828.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 442

 Score = 39.3 bits (90), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 43  IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +R  +  GK++R+   +     A   + + +  +R  AA+E +H  +++HDDL  +D+  
Sbjct: 114 LRAVVARGKRLRAAFCYWGWRAAGRDDTDDI--VRAAAAMELVHAAAVVHDDL--IDHSA 169

Query: 100 IRRGKPTVH 108
           +R G PT H
Sbjct: 170 VRHGSPTAH 178


>gi|119493680|ref|XP_001263940.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
 gi|119412101|gb|EAW22043.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
          Length = 294

 Score = 39.3 bits (90), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 21/173 (12%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA-- 127
           ++A  +   +  +H  SL+ DD+   D+  +RRG P  H  +     I + N    +A  
Sbjct: 96  ISAFVIKRVVGLLHSASLLIDDI--QDSSKLRRGFPVAHSIFGVAQTINSANFAYFFAQQ 153

Query: 128 -FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--K 184
             + +  P+  +   I ++ ML L    G+        L  +D  I  T+   ++ +  K
Sbjct: 154 ELQKLGKPEALV---IFTEEMLRLHRGQGMD-------LYWRDSLICPTEEEYLEMVANK 203

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           TG L   A +   +M   SQN K+ +    + LGIIFQ+ DD  + + DL  K
Sbjct: 204 TGGLFRLAIK---LMQMESQNTKDCVPLV-DLLGIIFQIRDDYQNLQSDLYAK 252


>gi|238589678|ref|XP_002392090.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553]
 gi|215457662|gb|EEB93020.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553]
          Length = 153

 Score = 39.3 bits (90), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 183 MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCE 231
           MKT +LM     +   +   ++ E  +E    +G NLGI FQL DD+LD E
Sbjct: 1   MKTASLMAKGARAATCLGGCTEGELYREIAYAYGRNLGIAFQLVDDVLDYE 51


>gi|159124434|gb|EDP49552.1| geranylgeranyl diphosphate synthase, putative [Aspergillus
           fumigatus A1163]
          Length = 787

 Score = 39.3 bits (90), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           +  K +RS ++        V+  +  ++   ++ +H  SLI DD+   DN   RRG+P  
Sbjct: 496 MPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLHNASLILDDI--EDNSPKRRGRPAT 553

Query: 108 HIQYDEVTAIIAGNGLLTYAFEI 130
           H  +    AI + N +   A ++
Sbjct: 554 HTIFGHSQAINSANFMFVQAVQV 576


>gi|316969473|gb|EFV53567.1| polyprenyl synthetase superfamily [Trichinella spiralis]
          Length = 683

 Score = 39.3 bits (90), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 8/68 (11%)

Query: 49  GGKKIRSFLVT---ECASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK IR  L+T   E   LF+     A +   + +A+E +H   LI DD+  MDN   RR
Sbjct: 502 GGKGIRGRLLTGALEANVLFDDRTSLAQKAHTIASAVEMLHAGFLIQDDI--MDNASTRR 559

Query: 103 GKPTVHIQ 110
           GKP  + Q
Sbjct: 560 GKPCWYRQ 567


>gi|158286274|ref|XP_308653.4| AGAP007104-PA [Anopheles gambiae str. PEST]
 gi|157020390|gb|EAA04004.4| AGAP007104-PA [Anopheles gambiae str. PEST]
          Length = 443

 Score = 39.3 bits (90), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 84/228 (36%), Gaps = 23/228 (10%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLT 71
           ++ DL    + + +       + A++Y +  GKK R         ++     L   N   
Sbjct: 118 VVRDLTAYASKYDKNVATKWFVKALQYNVPQGKKNRGLACVLAYRMLARSEDLTPENIRR 177

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G AIE +H   LI DD+  MD    RRG+P  H   D+V      + ++  A  I 
Sbjct: 178 AQYLGWAIEMLHSMFLIMDDV--MDGSVTRRGQPCWHT-LDDVKLSGVNDAIMIEA-AIA 233

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM------LDIQDEFIDETQVFMIQKMKT 185
              K Q  +      +L L + +     +G  +      LD+ D  +D  +  +  K   
Sbjct: 234 HLVKIQYGNEPYYPRLLELFNEMKFITTIGQSLDLRSAKLDVTDYSMDLYKSIVFHKT-- 291

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
            A   F       M      + E  R        +G  +Q  DD  DC
Sbjct: 292 -AYYTFYLPVAMAMHLTGYTDPEMFRQAKTILLEIGQFYQTQDDFFDC 338


>gi|296424384|ref|XP_002841728.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637976|emb|CAZ85919.1| unnamed protein product [Tuber melanosporum]
          Length = 343

 Score = 39.3 bits (90), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 13/185 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR   +T   S   V  ++   +   +  +H  SL+ DD+    N  +RRG P  H 
Sbjct: 72  GKDIRQQSITAFNSWLQVPEVSLQIITKVVAMLHNASLLVDDVEDRSN--LRRGFPVAHS 129

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A + +      L   I ++ +L+L    G+       +    +
Sbjct: 130 IFGVAQTINSANYVYFQALQELLKLNNPLVLRIYTEELLNLHRGQGMDLFWRDTLTTPTE 189

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D++++     M+   KTG L   A +   +M   S ++K+ +      +G++FQ+ DD L
Sbjct: 190 DDYLE-----MVSN-KTGGLFRLAVK---LMQAESASDKDYVPLVNI-IGLLFQILDDYL 239

Query: 229 DCEED 233
           + + +
Sbjct: 240 NLQSN 244


>gi|222619102|gb|EEE55234.1| hypothetical protein OsJ_03111 [Oryza sativa Japonica Group]
          Length = 358

 Score = 39.3 bits (90), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 27/206 (13%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLT---------ALRVGAAIECIHCYSLIHDDLPSM 95
           Y +LGGK  R   V E   +      T         A  +G  IE +  Y L+ DD+  M
Sbjct: 55  YNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI--M 112

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRGKP    +  +V  I   +GL+  + +I    +   +       +L L + + 
Sbjct: 113 DNSQTRRGKPC-WFRLPKVGLIAINDGLVLRS-QISRIFRRYFRGKSYYVDLLDLFNEVE 170

Query: 156 LQGMLGGQMLD-------IQDEFIDETQVF-MIQKMKTGALMCF---ACESGAIMAHASQ 204
           +Q    GQ+LD        +D       V+  I + KT     +   AC    ++   S 
Sbjct: 171 IQTT-SGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVAC--ALLLFDESL 227

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
           +   +++     +G+ FQ  DD LDC
Sbjct: 228 DNYAQVKHILVEMGVYFQSQDDYLDC 253


>gi|254392222|ref|ZP_05007408.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326443937|ref|ZP_08218671.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705895|gb|EDY51707.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 439

 Score = 39.3 bits (90), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 43  IRYALLGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           +R  +  GK++R+   +     A   + + +  +R  AA+E +H  +++HDDL  +D+  
Sbjct: 111 LRAVVARGKRLRAAFCYWGWRAAGRDDTDDI--VRAAAAMELVHAAAVVHDDL--IDHSA 166

Query: 100 IRRGKPTVH 108
           +R G PT H
Sbjct: 167 VRHGSPTAH 175


>gi|13537421|dbj|BAB40665.1| farnesyl pyrophosphate synthase [Humulus lupulus]
 gi|13537423|dbj|BAB40666.1| farnesyl pyrophophate synthase [Humulus lupulus]
          Length = 342

 Score = 39.3 bits (90), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 98/249 (39%), Gaps = 36/249 (14%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQT----QHNDRLLSAIRYALLGGKKIRSFLVT 59
           GL SK  E    + +IL   LL   +   T    Q  +R+L    Y + GGK  R   V 
Sbjct: 3   GLRSKFME----VYSILKSELLNDPAFEFTDDSRQWVERMLD---YNVPGGKLNRGLSVI 55

Query: 60  ECASLFNV-NHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +   L      LT   +      G  IE +  Y L+ DD+  MDN   RRG+P    +  
Sbjct: 56  DSYQLLKGGKELTEEEIFLTSALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPC-WFRVP 112

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           +V  I A +G+L     I    K   K       +L L + +  Q    GQM+D+     
Sbjct: 113 KVGLIAANDGILLRN-HIPRILKKHFKGKSYYVDLLDLFNEVEFQTA-SGQMIDLITTIE 170

Query: 173 DETQV--------FMIQKMKTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIF 221
            E  +          I + KT     +   AC    +MA  + +    ++     +G  F
Sbjct: 171 GEKDLSKYSIPLHHRIVQYKTAYYSFYLPVAC--ALVMAGENLDNHVDVKNVLIEMGTYF 228

Query: 222 QLADDLLDC 230
           Q+ DD LDC
Sbjct: 229 QVQDDYLDC 237


>gi|269794899|ref|YP_003314354.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
 gi|269097084|gb|ACZ21520.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
          Length = 369

 Score = 39.3 bits (90), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 37  DRLLSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           D L  A    L GGK++R+            +       + + VGAA+E     +L HDD
Sbjct: 41  DPLADAWSQMLRGGKRLRAAFAYWSWRAHGGAPGGAEAASIVGVGAALELFQAAALFHDD 100

Query: 92  LPSMDNGYIRRGKPTVHIQY 111
           +  MD    RRG PT H  +
Sbjct: 101 V--MDRSDTRRGVPTAHRTF 118


>gi|312381025|gb|EFR26873.1| hypothetical protein AND_06760 [Anopheles darlingi]
          Length = 479

 Score = 39.3 bits (90), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 83/212 (39%), Gaps = 25/212 (11%)

Query: 39  LLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            + A++Y +  GKK R         ++ +   L   N   A  +G  IE +H   L+ DD
Sbjct: 174 FVRALQYNVPQGKKNRGLASVLAYRMLAKHEDLTPENIRRAQYLGWCIEMLHSMFLMIDD 233

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQLKDNIRSQLMLS 149
           +  MD   +RRG+P  H   D+V  +   +G++  A  F +I   K    +      +L 
Sbjct: 234 I--MDGSAMRRGQPAWHT-LDDVKMVAINDGIMIDAAIFYVI---KKHFGNEPYYARLLE 287

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALMCFACESGAIMAHASQ 204
               I     +G Q LD+    +D TQ  M     I   KT A   F       M     
Sbjct: 288 EFSEIKFITTIG-QSLDLLSAKMDVTQYTMDVYKSIVFHKT-AYYTFYLPVAMAMHMTGY 345

Query: 205 NEKERLRCFGE---NLGIIFQLADDLLDCEED 233
            + E  R        +G  +Q  DD LDC  D
Sbjct: 346 TDPEMFRQAKTILLEIGQFYQAQDDFLDCFGD 377


>gi|317138018|ref|XP_001816605.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
          Length = 364

 Score = 39.3 bits (90), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 31/200 (15%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L GK     ++       N++  +A  +   +  +   SL+ DD+   D   +RRG P  
Sbjct: 75  LPGKNTVGKVIESLRPWLNISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAA 132

Query: 108 HIQY------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGM 159
           H++Y      +  T IIA         +++S  +T L+  +    +LS+   +   LQ +
Sbjct: 133 HVKYGLSQTINSTTYIIA---------KVVSEVQTHLR--LECAKVLSVLRKLAEELQTL 181

Query: 160 LGGQMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             GQ LD+   F      ++E  V +    KTG           I A+A+ N++  LR  
Sbjct: 182 TLGQALDLNWTFNKTCPSVNEYLVMI--DHKTGGFFRLMLRIMEIEANATPNDE--LRHL 237

Query: 214 GENLGIIFQLADDLLDCEED 233
              LG  +Q+ DD  +   D
Sbjct: 238 ITLLGRYYQIRDDYQNIASD 257


>gi|22676905|gb|AAM98379.1| farnesyl diphosphate synthase [Hevea brasiliensis]
 gi|34013692|gb|AAQ56011.1| farnesyl diphosphate synthase [Hevea brasiliensis]
          Length = 342

 Score = 39.3 bits (90), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 38/241 (15%)

Query: 15  RIDTILDDLLLQTASHMQT----QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69
           ++ ++L   LL+  +   T    Q  +R+L    Y + GGK  R   V +   L      
Sbjct: 10  KVYSVLKQELLEDPAFEWTPDSRQWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGQE 66

Query: 70  ------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A  +G  IE +  Y L+ DD+  MD+ + RRG+P    +  +V  I A +G+
Sbjct: 67  LTEEEIFLASALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPC-WFRVPKVGLIAANDGI 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           L         P+  LK + R +     +L L + +  Q    GQM+D+      E  +  
Sbjct: 124 LLRN----HIPRI-LKKHFRGKAYYVDLLDLFNEVEFQTA-SGQMIDLITTLEGEKDLSK 177

Query: 180 --------IQKMKTGALMCFACESGAIMAHASQNEKERL--RCFGENLGIIFQLADDLLD 229
                   I + KT A   F       +  A +N    +  +     +GI FQ+ DD LD
Sbjct: 178 YTLSLHRRIVQYKT-AYYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLD 236

Query: 230 C 230
           C
Sbjct: 237 C 237


>gi|327262083|ref|XP_003215855.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Anolis
           carolinensis]
          Length = 300

 Score = 39.3 bits (90), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 79/200 (39%), Gaps = 34/200 (17%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL    Y L L GK++R+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYHYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH----- 152
             +RRG P  H  Y   + I   N +                     Q +L+L H     
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINCANFIYFLGL----------------QKVLTLDHPDAVK 113

Query: 153 --NIGLQGMLGGQMLDI--QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
              + L  +  GQ LDI  +D +    E++   +   KTG L   A     +M   S N 
Sbjct: 114 VFTLQLLELHKGQGLDIYWRDNYTCPTESEYKAMVLQKTGGLFGLAV---GLMQLFS-NY 169

Query: 207 KERLRCFGENLGIIFQLADD 226
           K+ L+     LG+ FQ+ DD
Sbjct: 170 KKDLKPLLNTLGLFFQIRDD 189


>gi|168031541|ref|XP_001768279.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680457|gb|EDQ66893.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 360

 Score = 39.3 bits (90), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 78/204 (38%), Gaps = 24/204 (11%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R   V     L   +          A  +G  IE +  Y L+ DD+  MDN
Sbjct: 58  YTVPGGKLNRGLSVVHSLELLKKDTPLSEQDTFNACALGWCIEWLQGYFLVMDDI--MDN 115

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG+P  + +  +V  I   +G++     I    K   + +     ++ L +++  Q
Sbjct: 116 SVTRRGQPCWY-RVPKVGLIAINDGIILRT-HISRVLKRHFRQSPIYVELVDLFNDVEYQ 173

Query: 158 GMLGGQMLDIQDEFIDETQV--------FMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               GQMLD+      E  +          I K KT A   F       +  A +    +
Sbjct: 174 TA-SGQMLDLITTPAGEVDLSKYVLPTYLRIVKYKT-AYYSFYLPVACALLLAGETSVAK 231

Query: 210 LRCFGE---NLGIIFQLADDLLDC 230
                E    +G  FQ+ DD LDC
Sbjct: 232 FEAAKEVLVQMGTYFQVQDDYLDC 255


>gi|218188900|gb|EEC71327.1| hypothetical protein OsI_03373 [Oryza sativa Indica Group]
          Length = 356

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 86/218 (39%), Gaps = 39/218 (17%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLT---------ALRVGAAIECIHCYSLIH 89
           L S + Y +LGGK  R   V E   +      T         A  +G  IE +  Y L+ 
Sbjct: 47  LESMLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVL 106

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146
           DD+  MDN   RRGKP    +  +V  I   +GL+          ++Q+    R      
Sbjct: 107 DDI--MDNSQTRRGKPC-WFRLPKVGLIAINDGLVL---------RSQISRIFRRYFCGK 154

Query: 147 -----MLSLTHNIGLQGMLGGQMLD-------IQDEFIDETQVF-MIQKMKTGALMCFAC 193
                +L L + +  Q    GQ+LD        +D       V+  I + KT     +  
Sbjct: 155 SYYVDLLDLFNEVEFQTT-SGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLP 213

Query: 194 ESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC 230
            + A++    S +   +++     +G+ FQ  DD LDC
Sbjct: 214 VACALLLFGESLDNYAQVKHILVEMGVYFQSQDDYLDC 251


>gi|149032543|gb|EDL87421.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Rattus
           norvegicus]
          Length = 267

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++QK  TG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDTYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
              + LG+ FQ+ DD
Sbjct: 175 PLLDTLGLFFQIRDD 189


>gi|267847005|gb|ACY80695.1| farnesyl pyrophosphate synthase [Cyclocarya paliurus]
          Length = 342

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 23/203 (11%)

Query: 45  YALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R         L+ E   L N     A  +G  IE +  Y L+ DD+  MDN
Sbjct: 41  YNVPGGKLNRGLSVIDSYKLLKEGKELTNDEIFLACALGWCIEWLQAYFLVLDDI--MDN 98

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG+P    +  +V  I   +G++     I    K   ++      +L L + +  Q
Sbjct: 99  SVTRRGQPC-WFRLPKVGMIAVNDGIILRN-HIPRILKNHFREKNYYVDLLDLFNEVEFQ 156

Query: 158 GMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAIMAHASQNEKER 209
               GQM+D+    + E  +          I + KT A   F       +  A +N +  
Sbjct: 157 TA-SGQMIDLITTLVGEKDLSKYSLSLHQRIVQYKT-AYYSFYLPVACALLMAGENLENH 214

Query: 210 L--RCFGENLGIIFQLADDLLDC 230
           +  +     +G  FQ+ DD LDC
Sbjct: 215 INVKNILIEMGNYFQVQDDYLDC 237


>gi|119964435|ref|YP_947457.1| polyprenyl synthetase [Arthrobacter aurescens TC1]
 gi|119951294|gb|ABM10205.1| putative polyprenyl synthetase [Arthrobacter aurescens TC1]
          Length = 364

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 48/162 (29%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLP 93
           L+ +I   + GGK++R+ +   C   +      A     +  G A+E     +LIHDD+ 
Sbjct: 43  LIGSISNLVTGGKRLRALM---CYWGWRGAGGPAGDPDIITAGCALELFQAAALIHDDI- 98

Query: 94  SMDNGYIRRGKPTVHIQYDEV----------------TAIIAGNGLLTYAFEIIS----- 132
            +D    RRG P+VH +++++                 AI+ G+  L+++ E  +     
Sbjct: 99  -IDRSDTRRGGPSVHKRFNQLHEMNGWALDSGRFGDAAAILTGDLCLSFSEESFTEIGHR 157

Query: 133 ----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
               SP  ++ + +R+++M              GQ LDI +E
Sbjct: 158 AAAGSPARRIFNVMRAEVM-------------AGQYLDILEE 186


>gi|171185989|ref|YP_001794908.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935201|gb|ACB40462.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 263

 Score = 38.9 bits (89), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +V  L  ++  A +E +H  SL+ DD+  MD    RRG  T    Y +  +I+A + L+ 
Sbjct: 62  SVLDLRIIQAAAIVELLHVVSLLQDDV--MDKHDERRGAKTPRALYGDGRSIVASDWLIA 119

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            + +       QL  +I  + +  +   + +     GQ LD+   + DE   F    +  
Sbjct: 120 ESIK----RALQLGPDI-VKYLADVAQRLSI-----GQALDLDGRY-DEAAEFKTAPLIE 168

Query: 186 GALMCFACESG--AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +L+  A   G   I+  A +         G+ LG+++Q ADD  D
Sbjct: 169 ASLVLPAMLLGRREILDSAKK--------LGQLLGVLYQYADDYSD 206


>gi|157418928|gb|ABV55169.1| quorum-sensing protein [Bacillus subtilis]
 gi|157418932|gb|ABV55171.1| quorum-sensing protein [Bacillus subtilis]
          Length = 287

 Score = 38.9 bits (89), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + + IE +   + I DD+   DN           ++ D   A  A   L T + ++I S 
Sbjct: 52  LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               K       +LSLT    LQ  L GQ +D+      E++   + K+K+G+L+     
Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G  +A    N  E +  +   LG++ Q+A+D
Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187


>gi|14422406|dbj|BAB60822.1| putative FPP synthase 2 [Eucommia ulmoides]
          Length = 342

 Score = 38.9 bits (89), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 26/210 (12%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R   V +   L              A  +G  IE +  Y L+ DD+  MD+
Sbjct: 41  YNVPGGKLNRGLSVIDSFKLLKEGKEPTDEEIFLACVLGWCIEWLQAYFLVLDDI--MDS 98

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
            + RRG+P    +  +V  I   +GL+     I    K   K       +L L + +  Q
Sbjct: 99  SHTRRGQPC-WFRLPKVGMIAVNDGLILRN-HIPRILKKHFKGKPYYVDLLDLFNEVEFQ 156

Query: 158 GMLGGQMLDIQDEFIDETQV--------FMIQKMKTGALMCF---ACESGAIMAHASQNE 206
               GQM+D+    + E  +          I + KT     +   AC    +M+  + + 
Sbjct: 157 TA-SGQMIDLITTLVGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVAC--ALVMSGENLDN 213

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              ++     +G  FQ+ DD LDC  D PK
Sbjct: 214 HVDVKNILVEMGTYFQVQDDYLDCFGD-PK 242


>gi|296813323|ref|XP_002846999.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
           113480]
 gi|238842255|gb|EEQ31917.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
           113480]
          Length = 345

 Score = 38.9 bits (89), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 14/179 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+ R+ L++       V+  +   +   I  +H  SL+ DD+   DN  +RRG+P  H 
Sbjct: 67  GKEFRTQLLSAFNVWLKVSPDSLQCISGVIRMLHNASLLVDDI--QDNSRLRRGRPVAHS 124

Query: 110 QYDEVTAIIAGNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM-LDI 167
            +     I + N +   A  E+   P ++    I +  MLSL    G+       +    
Sbjct: 125 VFGVAQTINSANFVYFLALAELQKLPHSKEAMEIFTAEMLSLHRGQGMDLFWRDTLSCPS 184

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +D++++     M+   KTG L   A +    +  A    K         LG+IFQ+ DD
Sbjct: 185 EDDYLE-----MVSN-KTGGLFRLAIK----LMQAECETKVDCMPLVNLLGLIFQITDD 233


>gi|295401745|ref|ZP_06811711.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976232|gb|EFG51844.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 310

 Score = 38.9 bits (89), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 11/154 (7%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+ AA+E +     I DDL   D+      K  +   +     ++           I   
Sbjct: 69  RIAAAVELLMLAGDILDDLMDQDSLETSWSKAPLTTSFHMAIGLLLAGQKAIADLPIDDD 128

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            K + +  I S+L+ SL           GQ +D+ +    ET    + K K+G+L+  AC
Sbjct: 129 KKAKAQSYILSRLLQSL----------NGQHMDVTNGIQTETDYLQMLKKKSGSLVAMAC 178

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             G  +A A +N    +  +  ++GI  Q+ +D+
Sbjct: 179 FVGTALAGAEKN-TVIIEKYANDIGIAAQIDNDI 211


>gi|56090562|ref|NP_001007627.1| geranylgeranyl pyrophosphate synthase [Rattus norvegicus]
 gi|81891588|sp|Q6F596|GGPPS_RAT RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|50428383|dbj|BAD30051.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
 gi|50428385|dbj|BAD30052.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
 gi|50428387|dbj|BAD30053.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
 gi|50428389|dbj|BAD30054.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
 gi|59861856|gb|AAH90327.1| Geranylgeranyl diphosphate synthase 1 [Rattus norvegicus]
          Length = 300

 Score = 38.9 bits (89), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L       
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++QK  TG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDTYTCPTEEEYKAMVLQK--TGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
              + LG+ FQ+ DD
Sbjct: 175 PLLDTLGLFFQIRDD 189


>gi|205363969|gb|ACI04497.1| CrtE [uncultured bacterium]
          Length = 351

 Score = 38.9 bits (89), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 18/158 (11%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  SLI DD+   D    RRG P +H  +    A+ AGN L  +A+ ++       
Sbjct: 88  VEVLHAGSLIVDDI--QDESEERRGGPALHQIHGVPLALNAGNWLYFWAYALLGEIDLPD 145

Query: 139 KDNIRSQLMLSLTHNIGLQGML---GGQMLDIQDEFIDETQVFMIQK------MKTGALM 189
           +  +R+       H +  + +L    GQ LD+     D  Q  +         +KTG+L+
Sbjct: 146 EAAVRA-------HRLVTRALLDCHAGQGLDLSVRMSDVAQAAVPAVVRASTLLKTGSLL 198

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             A   GA++  A+ +       FG++LG   Q+ DDL
Sbjct: 199 GLAAGLGALVGGATADAIAASARFGQDLGTGLQMLDDL 236


>gi|196004414|ref|XP_002112074.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens]
 gi|190585973|gb|EDV26041.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens]
          Length = 286

 Score = 38.9 bits (89), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 11/179 (6%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + GK+IR  L+    +   +       + + ++ +H  SL+ DD+   DN  +RRG P  
Sbjct: 10  IPGKEIRVKLIQAFNNWLQIPEDKLAAISSVVQMLHNASLLIDDIE--DNSKLRRGVPVA 67

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  +     I A N +   A   I S        I ++ ML L    GL  +      D 
Sbjct: 68  HQIFGLAQTINAANYVYFKAMHEILSLNHPDGVKIFTEEMLELHQGQGLDILWR----DS 123

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            +   +E    M+ K KTG L   A     +M   S+N K         L + FQ+ DD
Sbjct: 124 HNCPSEEEYKMMVNK-KTGGLFRLAVN---LMQLFSEN-KRNFTPLLNYLSLFFQIGDD 177


>gi|115439359|ref|NP_001043959.1| Os01g0695300 [Oryza sativa Japonica Group]
 gi|56785155|dbj|BAD81810.1| putative farnesyl-pyrophosphate synthetase fps2 [Oryza sativa
           Japonica Group]
 gi|113533490|dbj|BAF05873.1| Os01g0695300 [Oryza sativa Japonica Group]
          Length = 307

 Score = 38.9 bits (89), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 27/206 (13%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLT---------ALRVGAAIECIHCYSLIHDDLPSM 95
           Y +LGGK  R   V E   +      T         A  +G  IE +  Y L+ DD+  M
Sbjct: 4   YNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI--M 61

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN   RRGKP    +  +V  I   +GL+  + +I    +   +       +L L + + 
Sbjct: 62  DNSQTRRGKPC-WFRLPKVGLIAINDGLVLRS-QISRIFRRYFRGKSYYVDLLDLFNEVE 119

Query: 156 LQGMLGGQMLD-------IQDEFIDETQVF-MIQKMKTGALMCF---ACESGAIMAHASQ 204
           +Q    GQ+LD        +D       V+  I + KT     +   AC    ++   S 
Sbjct: 120 IQTT-SGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVAC--ALLLFDESL 176

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
           +   +++     +G+ FQ  DD LDC
Sbjct: 177 DNYAQVKHILVEMGVYFQSQDDYLDC 202


>gi|303391601|ref|XP_003074030.1| farnesyl pyrophosphate synthetase [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303303179|gb|ADM12670.1| farnesyl pyrophosphate synthetase [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 292

 Score = 38.9 bits (89), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 26/219 (11%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--VNHLTAL 73
           I  I+   +LQ + +    +   +L  + Y L GGK++R        +  N  +N    L
Sbjct: 2   IKEIVKRKVLQLSDYY---NKSEILFLLDYNLEGGKELRYKAYIHVLNALNGEMNE-KNL 57

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            VG  IE +    LI DDL  MDN  +RR KP  +++         G  ++  AF ++  
Sbjct: 58  TVGYTIELLQAALLITDDL--MDNSEVRREKPCYYLK--------RGTKVIKDAFFLLGV 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +  +   ++     S+       G     +   + E+  E     I + KTGA   +  
Sbjct: 108 IRKMIDKRMKRPYSYSIFKTC--IGQTHDTIRKTRAEYNIEAYT-AIAESKTGAYTFYL- 163

Query: 194 ESGAIMAH--ASQNEKERLRCFGENLG-IIFQLADDLLD 229
              AI  +  A + E E L  F  NLG +IFQ+ DD L+
Sbjct: 164 --PAIFGYISAKKKEPEYLWDFC-NLGALIFQMQDDYLN 199


>gi|296230923|ref|XP_002760938.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
           [Callithrix jacchus]
 gi|296230925|ref|XP_002760939.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
           [Callithrix jacchus]
          Length = 300

 Score = 38.9 bits (89), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 82/202 (40%), Gaps = 38/202 (18%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E +                L+L H   ++
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKV----------------LTLDHPDAVK 113

Query: 158 -------GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
                   +  GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S 
Sbjct: 114 LFTCQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS- 167

Query: 205 NEKERLRCFGENLGIIFQLADD 226
           + KE L+     LG+ FQ+ DD
Sbjct: 168 DYKEDLKPLLNTLGLFFQIRDD 189


>gi|213402169|ref|XP_002171857.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
           yFS275]
 gi|211999904|gb|EEB05564.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
           yFS275]
          Length = 341

 Score = 38.9 bits (89), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 87/234 (37%), Gaps = 26/234 (11%)

Query: 19  ILDDLLLQTASHMQTQH--NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
           I+ D L Q+ S +       + +L  I    +GGK  R   V E   +     LT     
Sbjct: 11  IILDTLTQSLSKLNCPEGLKENVLHTITQNTIGGKGTRGKAVLESVKVLLGTELTDDMHE 70

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +  +G  +E +    L+ DD+  MD    RRG+P  ++Q     A      +    F +
Sbjct: 71  KSCLLGWIVEMLQGSFLVADDI--MDKSLTRRGRPCWYLQVGTSRAFTEAVMMENLVFVL 128

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--------LDIQDEFIDETQVFMIQK 182
           +   +   +D    + +L   H I LQ   G +M        + +   F  +   F++  
Sbjct: 129 L---RLFFRDQPYYKELLDTFHEILLQTETGQEMDLILSIGGVPMNTSFSLKAYEFIVT- 184

Query: 183 MKTGALMCFACESGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLDCEED 233
            KT A   F       M      EK+     +     LG  FQ  DD LDC  D
Sbjct: 185 YKT-AYYSFYLPIKCAMILVGMKEKQAYVDAKRLAVQLGRYFQFQDDFLDCYGD 237


>gi|229820403|ref|YP_002881929.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566316|gb|ACQ80167.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
          Length = 362

 Score = 38.9 bits (89), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 10/66 (15%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L   CA+               +  GAA+E     +L+HDD+  MD   +RR
Sbjct: 49  GGKRLRALLC--CAAWEAAGGAVPSAGDPVVLAGAALELFQAAALVHDDV--MDASDVRR 104

Query: 103 GKPTVH 108
           G P  H
Sbjct: 105 GAPAAH 110


>gi|215480263|gb|ACJ67476.1| quorum sensing protein [Bacillus subtilis]
          Length = 252

 Score = 38.9 bits (89), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + + IE +   + I DD+   DN           ++ D   A  A   L T + ++I S 
Sbjct: 52  LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               K       +LSLT    LQ  L GQ +D+      E++   + K+K+G+L+     
Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G  +A    N  E +  +   LG++ Q+A+D
Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187


>gi|21955860|emb|CAD42869.1| farnesyl pyrophosphate synthase [Mucor circinelloides f.
           lusitanicus]
          Length = 352

 Score = 38.9 bits (89), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 36/250 (14%)

Query: 8   KLQENSKR------IDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           KLQ+   R        T+ D++LL+   + M     +     + Y + GGK  R   V +
Sbjct: 5   KLQKEENRQAFLKVFPTLADEVLLELRKYNMPEDAYEWTKKMLYYNVPGGKLNRGISVVD 64

Query: 61  CASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              +   + +T      A  +G  IE +  + L+ DD+  MD    RRG+P  +    E 
Sbjct: 65  TVRILKGDAVTEDDIFKATVLGWLIEFLQAFFLVSDDI--MDASITRRGQPCWYKS--EG 120

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
             ++A N        I    K   K       ++ L H +  Q  LG Q+ D+     D+
Sbjct: 121 VGMVAINDAFILESCIYIFLKKYFKKTDYYIELVELFHEVTFQTELG-QLCDLITAPEDD 179

Query: 175 TQV--FMIQK------MKTGALMCFACESGAIMAHASQNEKERLRCFGEN------LGII 220
             +  F I+K       KT     +   + A+     +NE+     F ++      LG  
Sbjct: 180 VDLSKFSIKKHQFIVIYKTAYYSFYLPVALAMHMVGIKNEE----AFKQSHDILIPLGEY 235

Query: 221 FQLADDLLDC 230
           FQ+ DD LDC
Sbjct: 236 FQVQDDYLDC 245


>gi|73952570|ref|XP_536340.2| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Canis
           familiaris]
          Length = 300

 Score = 38.9 bits (89), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 24/195 (12%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     + + +        + +  +L L       
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLQKVLTLDHPDAVKLFTHQLLELHQ----- 124

Query: 158 GMLGGQMLDI--QDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               GQ LDI  +D +     +E +  ++Q  KTG L   A     +M   S + KE L+
Sbjct: 125 ----GQGLDIYWRDNYTCPTEEEYKAMVLQ--KTGGLFGLAV---GLMQLFS-DYKEDLK 174

Query: 212 CFGENLGIIFQLADD 226
                LG+ FQ+ DD
Sbjct: 175 PLLNTLGLFFQIRDD 189


>gi|168070550|ref|XP_001786852.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660326|gb|EDQ48334.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 367

 Score = 38.9 bits (89), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  LV   +          + +  A+E +H  +L+HDDL  +D+   RRGK    
Sbjct: 290 GGKRIRPRLVFLASRALGGAPFE-MELALAVELLHSATLLHDDL--IDDAETRRGKEAAF 346

Query: 109 IQYDEVTAIIAG 120
            +Y    ++++G
Sbjct: 347 RKYGNAVSVLSG 358


>gi|78191049|gb|ABB29849.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 234

 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 22/175 (12%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G  IE +  Y L+ DD+  MDN + RRG+P  + +  +V  I   +G+L     + 
Sbjct: 2   ASALGRCIEWLQAYFLVLDDI--MDNSHTRRGQPCWY-KLPKVGMIAVNDGIL-----LR 53

Query: 132 SSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDE---------TQVF 178
                 LK++ R++     +L L + +  Q    GQM+D+    + E         T   
Sbjct: 54  DHITRILKNHFRAKPYYVDLLDLFNEVEFQTA-SGQMVDLITTLVGEKDLSKYSLPTHRR 112

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++Q                +MA  + ++   ++     +GI  Q+ DD LDC  D
Sbjct: 113 IVQYKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYSQVQDDYLDCFAD 167


>gi|215480273|gb|ACJ67481.1| quorum sensing protein [Bacillus subtilis]
          Length = 258

 Score = 38.5 bits (88), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + + IE +   + I DD+   DN           ++ D   A  A   L T + ++I S 
Sbjct: 52  LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               K       +LSLT    LQ  L GQ +D+      E++   + K+K+G+L+     
Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G  +A    N  E +  +   LG++ Q+A+D
Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187


>gi|212530618|ref|XP_002145466.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210074864|gb|EEA28951.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 297

 Score = 38.5 bits (88), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +LS  +Y   L  KK+R   +   +  F+V       +   I+ +H  SL+ DD+   D+
Sbjct: 104 ILSPSQYVKSLPSKKVRHHAIDALSIWFDVPEAELSVMKDTIDTLHNSSLMLDDIE--DD 161

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +RRG P+ H+ +     I A N L   A E+
Sbjct: 162 SPLRRGFPSTHVVFGISQTINAANYLYVIALEM 194


>gi|66815945|ref|XP_641989.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4]
 gi|74856499|sp|Q54XP1|Y8823_DICDI RecName: Full=Probable farnesyl diphosphate synthase DDB_G0278823;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|60470032|gb|EAL68013.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4]
          Length = 356

 Score = 38.5 bits (88), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 29/213 (13%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALR---------VGAAIECIHCYSLIHDD 91
           + I+    GGK  R   V E  SL ++N   AL          +G  +E      L+ DD
Sbjct: 45  TVIKANSTGGKMNRGISVLE--SLESLNEGRALTRHEIFQAQTLGWCVEIFQACYLVSDD 102

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----M 147
           +  MD    RRGKP  + Q    +    G   +  +F I S     L+   +++     +
Sbjct: 103 I--MDQSLKRRGKPCWYKQKRPNSDQEVGLAAINDSFIIESCVFILLEKYFKNESYYLNI 160

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM-----IQKMKTGALMCFACESGAIMA 200
           + L H  G Q  LG Q+LD+  + I  D + + +     I + KT A   F       M 
Sbjct: 161 VELFHKTGFQTQLG-QLLDLTTQPIRGDFSSINLKNHTRITEYKT-AYYSFFFPVALAML 218

Query: 201 HASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
            +  N ++      +    +G+ FQ+ DD LDC
Sbjct: 219 MSKINHEQAFTTAKDILLPMGVYFQVQDDFLDC 251


>gi|134077098|emb|CAK45439.1| unnamed protein product [Aspergillus niger]
          Length = 360

 Score = 38.5 bits (88), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 26/184 (14%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K  R+ L+      + V   +   +      +H  SL+ DD+   D+  +RRGKP VH  
Sbjct: 47  KGFRNHLIDALQEWYKVPQASLAVISGVASLLHEASLMLDDI--QDDSPLRRGKPAVH-- 102

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLD 166
                  I G G      + I+S +  + + +R  L LS + ++     +  +  GQ  D
Sbjct: 103 ------TIFGVG------QTINSARFHINNALRLCLQLSPSASLIFSDQIAQLFTGQAHD 150

Query: 167 IQ----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +Q         E   F +   K GAL+     S  +   A+QN    L  F   +G   Q
Sbjct: 151 LQWARHKSIPTEEDYFRMVDGKNGALLILI--SRLMQNEATQNRTLDLTHFMNLIGRSHQ 208

Query: 223 LADD 226
           L DD
Sbjct: 209 LRDD 212


>gi|229819467|ref|YP_002880993.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565380|gb|ACQ79231.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
          Length = 366

 Score = 38.5 bits (88), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 39/220 (17%)

Query: 42  AIRYALLGGKKIRSFLVTECASLF-----------NVNHLTALRVGAAIECIHCYSLIHD 90
           A+R A  GGK++R  LV                  + +   A++V AA E +H   L+HD
Sbjct: 45  AVREACRGGKRVRPALVLAAFHGLRDDAGPGHEEGDPDGGAAVQVAAAFELLHAAFLLHD 104

Query: 91  DLPSMDNGYIRRGKP--------TVHI---------QYDEVTAIIAGNGLLTYAFEIISS 133
           D+  +D   +RRG+P          H          ++    A++AG+ L+  A   +++
Sbjct: 105 DV--IDGDLVRRGRPNLIAELAEAAHTDGVGSSPAHEWGTAAAVLAGDVLIHAALHAVAT 162

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALM 189
               +    R +L L L     L   + G++ D+    + E      V  +   KT A  
Sbjct: 163 --ADVPAEPRREL-LELVDRC-LVRTVAGEVADVAYAARVEVPRLPDVLRMTSWKTAAYS 218

Query: 190 CFA-CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           C A   +GAI+A A+   +  L   G  +G  +QL DD+L
Sbjct: 219 CEAPLVAGAILAGAAPGARAALADVGRAVGAAYQLRDDVL 258


>gi|188039903|gb|ACD47128.1| farnesyl pyrophosphate synthetase [Dendrobium huoshanense]
          Length = 174

 Score = 38.5 bits (88), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 18/169 (10%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  IE +  Y L+ DD+  MD+ + RRG+P   +       IIA N  +     I     
Sbjct: 1   GWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFVV--PKVGIIAANDGIILRNHIPRILN 56

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------QDEFIDETQVF-MIQKMKTGA 187
              +D      +L L + +  Q    GQMLD+       +D    +  V+  I + KT  
Sbjct: 57  RHFRDKTYYVHLLDLFNEVEFQTA-SGQMLDLITTHEGEKDLSKYKMPVYNRIVQYKTAY 115

Query: 188 LMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +   AC    +MA  + +    ++     +G  FQ+ DD LDC  D
Sbjct: 116 YSFYLPVAC--ALLMAGETLDNYVDVKRVLVEMGTYFQVQDDYLDCFGD 162


>gi|110590636|pdb|2HER|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Zoledronate
 gi|110590637|pdb|2HER|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Zoledronate
 gi|122921291|pdb|2O1O|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Risedronate.
 gi|122921292|pdb|2O1O|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Risedronate.
 gi|149243603|pdb|2Q58|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Zoledronate
 gi|149243604|pdb|2Q58|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Zoledronate
          Length = 368

 Score = 38.5 bits (88), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 40  LSAIRYALLGGKKIRS---FLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           L+ I Y +  GK IR     L++  +S + N+   +   +G  +E I    LI DD+  M
Sbjct: 61  LNCIDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--M 118

Query: 96  DNGYIRRGKPTVHIQYDEVTAI 117
           D+G  RRG P  +I + +  AI
Sbjct: 119 DSGKFRRGAPCWYIVHGQSNAI 140


>gi|215480233|gb|ACJ67461.1| quorum sensing protein [Bacillus subtilis]
          Length = 268

 Score = 38.5 bits (88), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + + IE +   + I DD+   DN           ++ D   A  A   L T + ++I S 
Sbjct: 52  LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               K       +LSLT    LQ  L GQ +D+      E++   + K+K+G+L+     
Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G  +A    N  E +  +   LG++ Q+A+D
Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187


>gi|146319410|ref|YP_001199122.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
 gi|145690216|gb|ABP90722.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
          Length = 164

 Score = 38.5 bits (88), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 3/100 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSL 87
           S M   H       + Y    GK +R+ L    A +       + L   A +E +H  +L
Sbjct: 25  SEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKLYFAAHLEVLHLATL 84

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           IHDD+  +D    RRG    H Q+    AI  G+ LL Y+
Sbjct: 85  IHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYS 122


>gi|94502447|ref|ZP_01308879.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|94450996|gb|EAT13989.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
          Length = 137

 Score = 38.5 bits (88), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%)

Query: 48  LGGKKIRS---FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           + GK IR    FL+T+     N++  T   +   IE IH  SLIHDD+    N   RRG 
Sbjct: 49  IKGKYIRPIFVFLITKMLG--NISKKTY-DLAILIELIHTASLIHDDVIDFSNT--RRGF 103

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +++  +   TA++ G+ + + +F+I
Sbjct: 104 LSINAIWQNKTALVFGDYIFSKSFDI 129


>gi|321312716|ref|YP_004205003.1| isoprenyl-trasferase [Bacillus subtilis BSn5]
 gi|320018990|gb|ADV93976.1| isoprenyl-trasferase [Bacillus subtilis BSn5]
          Length = 289

 Score = 38.5 bits (88), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 65  FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+   +TA+ + A+ IE +   + I DD+   DN           ++ D    I A   L
Sbjct: 41  FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            T + ++IS  S   QL         LSLT    LQ  L GQ  D+  +   E++   + 
Sbjct: 95  YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+K+G+L+      G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187


>gi|162312532|ref|XP_001713103.1| serine palmitoyltransferase Lcb2 (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|1346422|sp|Q09925|LCB2_SCHPO RecName: Full=Serine palmitoyltransferase 2; Short=SPT 2; AltName:
           Full=Long chain base biosynthesis protein 2
 gi|1001947|gb|AAC49534.1| serine palmitoyltransferase [Schizosaccharomyces pombe]
 gi|159884011|emb|CAA91967.3| serine palmitoyltransferase Lcb2 (predicted) [Schizosaccharomyces
           pombe]
          Length = 603

 Score = 38.5 bits (88), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 16/159 (10%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDN---GYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +NH T++R GA +   +     H+D+  ++      I +G+P  H  Y ++  +I   GL
Sbjct: 280 LNH-TSIRFGARLSGANIRVYKHNDMTDLERVLREVISQGQPRTHRPYSKILVVI--EGL 336

Query: 124 LTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
            +        PK  +LK+  +  L +   H+IG  G  GG + D      D   + M   
Sbjct: 337 YSMEGNFCDLPKVVELKNRYKFYLFIDEAHSIGAIGPRGGGICDYFGISTDHVDILMGTF 396

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            K+     F    G I   A+ N   +LR    N G ++
Sbjct: 397 TKS-----FGAAGGYI--SATPNIINKLRV--TNPGYVY 426


>gi|328793440|ref|XP_396188.3| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Apis
           mellifera]
          Length = 210

 Score = 38.5 bits (88), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 29/52 (55%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT +L+    ++ A++A A     E    +G N+G+ FQL DDLLD    LP
Sbjct: 61  KTASLIANTLKAEAMLADADDQLAELAFQYGRNIGLAFQLVDDLLDFVSTLP 112


>gi|215480271|gb|ACJ67480.1| quorum sensing protein [Bacillus subtilis]
          Length = 241

 Score = 38.5 bits (88), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + + IE +   + I DD+   DN           ++ D   A  A   L T + ++I S 
Sbjct: 52  LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               K       +LSLT    LQ  L GQ +D+      E++   + K+K+G+L+     
Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G  +A    N  E +  +   LG++ Q+A+D
Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187


>gi|215480261|gb|ACJ67475.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 38.5 bits (88), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + + IE +   + I DD+   DN           ++ D   A  A   L T + ++I S 
Sbjct: 52  LASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATALYTLSLQVIGSV 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               K       +LSLT    LQ  L GQ +D+      E++   + K+K+G+L+     
Sbjct: 106 SNHPK-------LLSLTLQYSLQS-LQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSI 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G  +A    N  E +  +   LG++ Q+A+D
Sbjct: 158 LGVYLATGECN--ETVEEYSRYLGVVEQIAND 187


>gi|145641599|ref|ZP_01797176.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           R3021]
 gi|145273646|gb|EDK13515.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           22.4-21]
          Length = 144

 Score = 38.5 bits (88), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 162 GQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKER-LRCFGENL 217
           GQ LD+  E   I  +++ +I + KTGAL+  A + G I + H +    E+ L  + E +
Sbjct: 4   GQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAI 63

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQ+ DD+LD E D
Sbjct: 64  GLAFQVQDDILDIEGD 79


>gi|68165941|gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]
          Length = 342

 Score = 38.5 bits (88), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 24/213 (11%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86
           Q  +R+L    Y + GGK  R         L+ E   L +     +  +G  IE +  Y 
Sbjct: 33  QWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGKELSDDEIFLSSALGWCIEWLQAYF 89

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MD+ + RRG+P    +  +V  I   +G+L     I    K   +       
Sbjct: 90  LVLDDI--MDSSHTRRGQPC-WFRLPKVGMIAVNDGILLRN-HIPRILKKHFRQKPYYVD 145

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAI 198
           +L L + +  Q    GQM+D+    + E  +          I + KT     +   + A+
Sbjct: 146 LLDLFNEVEFQTA-SGQMIDLITTLVGEKDLSKYSLPIHRRIVQYKTAYYSFYLPVACAL 204

Query: 199 MAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
           +      EK   ++     +G  FQ+ DD LDC
Sbjct: 205 LMSGEDLEKHTNVKDILIEMGTYFQVQDDYLDC 237


>gi|67619073|ref|XP_667626.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis TU502]
 gi|54658782|gb|EAL37400.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis]
          Length = 353

 Score = 38.5 bits (88), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 40  LSAIRYALLGGKKIRS---FLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           L+ I Y +  GK IR     L++  +S + N+   +   +G  +E I    LI DD+  M
Sbjct: 46  LNCIDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--M 103

Query: 96  DNGYIRRGKPTVHIQYDEVTAI 117
           D+G  RRG P  +I + +  AI
Sbjct: 104 DSGKFRRGAPCWYIVHGQSNAI 125


>gi|253761777|ref|XP_002489263.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor]
 gi|241947012|gb|EES20157.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor]
          Length = 325

 Score = 38.1 bits (87), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  +  S AI +  S +  E++  +G NLG+ FQ+ DD+LD
Sbjct: 176 KTASLIAASTRSAAIFSGVSTSICEQMYEYGRNLGLSFQVVDDILD 221


>gi|66357330|ref|XP_625843.1| farnesyl pyrophosphate synthase [Cryptosporidium parvum Iowa II]
 gi|46226968|gb|EAK87934.1| putative farnesyl pyrophosphate synthase [Cryptosporidium parvum
           Iowa II]
          Length = 384

 Score = 38.1 bits (87), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 40  LSAIRYALLGGKKIRS---FLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           L+ I Y +  GK IR     L++  +S + N+   +   +G  +E I    LI DD+  M
Sbjct: 77  LNCIDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--M 134

Query: 96  DNGYIRRGKPTVHIQYDEVTAI 117
           D+G  RRG P  +I + +  AI
Sbjct: 135 DSGKFRRGAPCWYIVHGQSNAI 156


>gi|295674851|ref|XP_002797971.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
           brasiliensis Pb01]
 gi|226280621|gb|EEH36187.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
           brasiliensis Pb01]
          Length = 407

 Score = 38.1 bits (87), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+       +V   +   +   +  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 107 GKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDV--EDSSNLRRGVPVAHN 164

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A E +   ++    N+  + +L+L    G+       +    +
Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLRSPNAINVYVKELLNLHRGQGMDVFWRDTLTCPTE 224

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +E+++     M+   KTG L   A +   +M   S  E + +      +G+IFQ+ DD L
Sbjct: 225 EEYLE-----MVGN-KTGGLFRLAIK---LMQAESDTEIDCV-ALANLMGLIFQICDDYL 274

Query: 229 D 229
           +
Sbjct: 275 N 275


>gi|222629694|gb|EEE61826.1| hypothetical protein OsJ_16466 [Oryza sativa Japonica Group]
          Length = 403

 Score = 38.1 bits (87), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 33/208 (15%)

Query: 45  YALLGGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R   V +   L        + +   A  +G  +E +   +L+ DD+   DN
Sbjct: 102 YNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDIT--DN 159

Query: 98  GYIRRGK------PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
            Y RR        PTV +     +AI  G  L  +   II   K   K+      ++ L 
Sbjct: 160 AYTRRDNLCWYKLPTVGM-----SAINDGVLLKCHVQAII---KRYFKEKFYFLDLMELW 211

Query: 152 HNIGLQGMLGGQMLDI-------QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHAS 203
           + IGLQ  +G QMLD+       +D      Q +  I K KT     +   + A++ + +
Sbjct: 212 NEIGLQTAMG-QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGA 270

Query: 204 Q-NEKERLRCFGENLGIIFQLADDLLDC 230
           + ++   L+     +G+ FQ+ DD LDC
Sbjct: 271 RLSDYVELKNVLIEMGVYFQIQDDYLDC 298


>gi|255642257|gb|ACU21393.1| unknown [Glycine max]
          Length = 342

 Score = 38.1 bits (87), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 17/97 (17%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFN---------VNHLTALRVGAAIECIHCYSL 87
           DR+L    Y + GGK  R   V +   L           + H +AL  G  IE +  Y L
Sbjct: 36  DRMLD---YNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFHASAL--GWCIEWLQAYFL 90

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           + DD+  MDN + RRG+P    +  +V  I A +G+L
Sbjct: 91  VLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVL 124


>gi|145591919|ref|YP_001153921.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283687|gb|ABP51269.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 263

 Score = 38.1 bits (87), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 23/195 (11%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPS 94
           L  A RY +   GK +R  L+   +   +   L   RV  A   +E +H  SL+ DD+  
Sbjct: 31  LRDAARYYIEKPGKMLRPILLLTFSYSLDRRSLMDPRVLQAATIVELLHIVSLLQDDV-- 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD    RRG  T  + Y +   ++A + L      I  S K  +K     + ++    ++
Sbjct: 89  MDKHDERRGAKTPRVIYGDERTVLASDWL------IAESIKRAVK---LGEEVVEYLADV 139

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
             Q +  GQ LD++ E     +      +KT  L+       A++    ++  E  +  G
Sbjct: 140 A-QRLSMGQALDLEGEREKAAE------LKTAPLIEATLVLPALLLK-RRDVLELAKRLG 191

Query: 215 ENLGIIFQLADDLLD 229
            +LG+++Q +DDL D
Sbjct: 192 ASLGVLYQYSDDLSD 206


>gi|70982877|ref|XP_746966.1| geranylgeranyl pyrophosphate synthetase AtmG [Aspergillus fumigatus
           Af293]
 gi|66844591|gb|EAL84928.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
           fumigatus Af293]
 gi|159123850|gb|EDP48969.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
           fumigatus A1163]
          Length = 357

 Score = 38.1 bits (87), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 40/242 (16%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
            G  PS LQE  K  D   D ++     ++ +                GK IR  L++  
Sbjct: 52  TGSSPSDLQEQRKLAD---DKIIWAPLDYLCS--------------FPGKDIRGKLISAF 94

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                +       +   +  +H  SL+ DD+   D+  +RRG P  H  +     I + N
Sbjct: 95  NQWLQIPEDKLDVIKRVVGLLHSASLLIDDI--QDSSKLRRGFPVAHSIFGIAQTINSAN 152

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFI--DETQV 177
               +A       + +LK   + + M+  T    +  +  GQ LD+  +D      E + 
Sbjct: 153 FAYFWA-------QQELKKLGKPEAMVIFTEE--MLRLHRGQGLDLYWRDSLTCPTEEEY 203

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG--ENLGIIFQLADDLLDCEEDLP 235
             +   KTG L   A +   + +H +++      C    + LGIIFQ+ DD  + + DL 
Sbjct: 204 LEMVANKTGGLFRLAIKLMQMESHNTED------CVPLVDLLGIIFQIRDDYQNLQSDLY 257

Query: 236 KK 237
            K
Sbjct: 258 AK 259


>gi|215480219|gb|ACJ67454.1| quorum sensing protein [Bacillus subtilis]
          Length = 270

 Score = 38.1 bits (87), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 65  FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+   +TA+ + A+ IE +   + I DD+   DN           ++ D    I A   L
Sbjct: 41  FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            T + ++IS  S   QL         LSLT    LQ  L GQ  D+  +   E++   + 
Sbjct: 95  YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+K+G+L+      G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187


>gi|297790967|ref|XP_002863368.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309203|gb|EFH39627.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score = 38.1 bits (87), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 31/210 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH-LTALRV------GAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R   V +   L      LT   V      G  IE +  Y L+ DD+  MDN
Sbjct: 42  YNVRGGKLNRGLSVVDSFKLLKEGKDLTEQEVFLSCALGWCIEWLQAYFLVLDDI--MDN 99

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHN 153
              RRG+P    +  +V  +   +G+L     + +     LK + R       ++ L + 
Sbjct: 100 SVTRRGQPC-WFRVPQVGMVAINDGIL-----LRNHIHRILKKHFRGMPYYVDLVDLFNE 153

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALMCFACESGAIMAHASQN 205
           + LQ   G QM+D+   F  E  +          I + KT A   F       +  A +N
Sbjct: 154 VELQTACG-QMIDLITTFEGEKDLSKYSLSIHRRIVQYKT-AYYSFYLPVACALLMAGEN 211

Query: 206 EKERL--RCFGENLGIIFQLADDLLDCEED 233
            +  +  +    ++GI FQ+ DD LDC  D
Sbjct: 212 LENHIDVKNVLVDMGIYFQVQDDYLDCFAD 241


>gi|115461044|ref|NP_001054122.1| Os04g0657300 [Oryza sativa Japonica Group]
 gi|39545740|emb|CAE75966.1| OSJNBa0071I13.18 [Oryza sativa Japonica Group]
 gi|113565693|dbj|BAF16036.1| Os04g0657300 [Oryza sativa Japonica Group]
 gi|125550054|gb|EAY95876.1| hypothetical protein OsI_17742 [Oryza sativa Indica Group]
          Length = 407

 Score = 38.1 bits (87), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 33/208 (15%)

Query: 45  YALLGGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R   V +   L        + +   A  +G  +E +   +L+ DD+   DN
Sbjct: 106 YNVPGGKLNRGLSVVDSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDIT--DN 163

Query: 98  GYIRRGK------PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
            Y RR        PTV +     +AI  G  L  +   II   K   K+      ++ L 
Sbjct: 164 AYTRRDNLCWYKLPTVGM-----SAINDGVLLKCHVQAII---KRYFKEKFYFLDLMELW 215

Query: 152 HNIGLQGMLGGQMLDI-------QDEFIDETQVFM-IQKMKTGALMCFACESGAIMAHAS 203
           + IGLQ  +G QMLD+       +D      Q +  I K KT     +   + A++ + +
Sbjct: 216 NEIGLQTAMG-QMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGA 274

Query: 204 Q-NEKERLRCFGENLGIIFQLADDLLDC 230
           + ++   L+     +G+ FQ+ DD LDC
Sbjct: 275 RLSDYVELKNVLIEMGVYFQIQDDYLDC 302


>gi|296818379|ref|XP_002849526.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
 gi|238839979|gb|EEQ29641.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
          Length = 366

 Score = 38.1 bits (87), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A L GK+IR  L+        V+  +   +   I   H  SL+ DD+   DN  +RRG P
Sbjct: 84  AALPGKEIRRKLLDAFNVWLKVDEESCEIIARTITMAHNASLMIDDI--QDNSQLRRGVP 141

Query: 106 TVHIQYDEVTAIIAGN 121
           T H  Y     I A N
Sbjct: 142 TAHRVYGIAQTINAAN 157


>gi|238498004|ref|XP_002380237.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
 gi|220693511|gb|EED49856.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
          Length = 387

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 73/200 (36%), Gaps = 32/200 (16%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L  K IR   +    S   V   ++  + + I  +H  SL+ DD+   DN   RRG PT 
Sbjct: 113 LPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI--EDNSVPRRGSPTT 170

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-----LQGMLGG 162
           H  +     I + N     AFE +                L   + IG     L+ +  G
Sbjct: 171 HTLFGVGQTINSANYTFVCAFEELQK--------------LQSPNAIGVFIEQLKNLHCG 216

Query: 163 QMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           Q LD+  ++       DE    +  K      +C     G     + + E    R F   
Sbjct: 217 QGLDLYWKYNTHVPTADEYMTMIDHKTGGPFRLCVRLMQG---ESSGKTEHIDARRFVTL 273

Query: 217 LGIIFQLADDL--LDCEEDL 234
           LG  FQ+ DD   L   EDL
Sbjct: 274 LGRYFQIRDDYQNLTSAEDL 293


>gi|215480217|gb|ACJ67453.1| quorum sensing protein [Bacillus subtilis]
          Length = 268

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 65  FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+   +TA+ + A+ IE +   + I DD+   DN           ++ D    I A   L
Sbjct: 41  FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            T + ++IS  S   QL         LSLT    LQ  L GQ  D+  +   E++   + 
Sbjct: 95  YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+K+G+L+      G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187


>gi|215480281|gb|ACJ67485.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 65  FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+   +TA+ + A+ IE +   + I DD+   DN           ++ D    I A   L
Sbjct: 41  FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            T + ++IS  S   QL         LSLT    LQ  L GQ  D+  +   E++   + 
Sbjct: 95  YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+K+G+L+      G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187


>gi|14279425|gb|AAK58594.1|AF268889_1 farnesyl pyrophosphate synthase [Humulus lupulus]
          Length = 342

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 18/167 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN   RRG+P    +  +V  I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPC-WFRVPKVGLIAANDGILLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   K       +L L + +  Q    GQM+D+      E  +          I + KT 
Sbjct: 134 KKHFKGKSYYVDLLDLFNEVEFQTA-SGQMIDLITTIEGEKDLSKYSIPLHHRIVQYKTA 192

Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
               +   AC    +MA  + +    ++     +G  FQ+ DD LDC
Sbjct: 193 YYSFYLPVAC--ALVMAGENLDNHVDVKNVLIEMGTYFQVQDDYLDC 237


>gi|321261676|ref|XP_003195557.1| farnesyltranstransferase [Cryptococcus gattii WM276]
 gi|317462031|gb|ADV23770.1| Farnesyltranstransferase, putative [Cryptococcus gattii WM276]
          Length = 322

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IRS L+        V+    + +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 35  GKEIRSKLIDAFNLWLEVDKDDLVVITKVVRMLHNASLLMDDVE--DNSELRRGLPVAHT 92

Query: 110 QYDEVTAIIAGNGLLTYAFE 129
            Y     I   N +   AF+
Sbjct: 93  IYGVPQTINTANYVYFLAFQ 112


>gi|215480215|gb|ACJ67452.1| quorum sensing protein [Bacillus subtilis]
          Length = 265

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 65  FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+   +TA+ + A+ IE +   + I DD+   DN           ++ D    I A   L
Sbjct: 41  FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            T + ++IS  S   QL         LSLT    LQ  L GQ  D+  +   E++   + 
Sbjct: 95  YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+K+G+L+      G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187


>gi|168203179|gb|ACA21460.1| farnesyl diphosphate synthase 4 [Picea abies]
          Length = 347

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 76/202 (37%), Gaps = 21/202 (10%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R   V +   L                 +G  IE +  Y LI DD+  MD+
Sbjct: 46  YTVPGGKLNRGLSVIDSYRLLKAGKEISEDEVFLGCVLGWCIEWLQAYFLILDDI--MDS 103

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
            + RRG+P    +  +V  I   +G+L     I    K   +       +L L + +  Q
Sbjct: 104 SHTRRGQPC-WFRLPKVGLIAVNDGILLRN-HICRILKKHFRTKPYYVDLLDLFNEVEFQ 161

Query: 158 GMLGGQMLDI---------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               GQ+LD+           ++   T V ++Q                +MA  + +   
Sbjct: 162 TA-SGQLLDLITTHEGATDLSKYKMPTYVRIVQYKTAYYSFYLPVACALVMAGENLDNHV 220

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
            ++     +G  FQ+ DD LDC
Sbjct: 221 DVKNILVEMGTYFQVQDDYLDC 242


>gi|281201286|gb|EFA75498.1| geranylgeranyl diphosphate synthase 1 [Polysphondylium pallidum
           PN500]
          Length = 300

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 3/107 (2%)

Query: 24  LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           + +  S+  ++ +  LL   +Y +   GK IR+ L+        V+     +V   ++ +
Sbjct: 1   MYKKFSYPLSEKDVALLEPYKYISETPGKGIRTILIEAFNHWLKVDSEYVKKVADIVQAL 60

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           H  SL+ DD+   DN  +RRG P  H  Y     I   N +   A +
Sbjct: 61  HMSSLLIDDIE--DNSKLRRGMPVAHDIYGYAQTINCANTVYFLAMD 105


>gi|212532131|ref|XP_002146222.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC
           18224]
 gi|210071586|gb|EEA25675.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC
           18224]
          Length = 396

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  ++    +   V   +   + + +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 104 GKDIRKQMIAAFNAWLKVPEQSLEIITSVVAMLHNASLLIDDV--EDNSVLRRGIPVAHN 161

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A + +    +     I ++ +L+L    G+       +    +
Sbjct: 162 IFGTAQTINSANYVYFLALQELRKLNSPAAIEIYTEELLNLHKGQGMDLFWRDTLTCPTE 221

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +E+++     M+   KTG L   A +   +M   S+  K+ +      LG+IFQ+ DD L
Sbjct: 222 EEYLE-----MVDN-KTGGLFRLAVK---LMQAESEAGKDCVPLVN-ILGLIFQICDDYL 271

Query: 229 D 229
           +
Sbjct: 272 N 272


>gi|215480257|gb|ACJ67473.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 21/165 (12%)

Query: 65  FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+   +TA+ + A+ IE +   + I DD+   DN           ++ D    I A   L
Sbjct: 41  FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATTL 94

Query: 124 LTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            T + ++IS  S   QL         LSLT    LQ  L GQ  D+  +   E++   + 
Sbjct: 95  YTLSLQVISLVSNNPQL---------LSLTLQYSLQS-LQGQHADLNVKISSESEYIEMI 144

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+K+G+L+      G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 145 KLKSGSLVTLPSVLGVYLATGEIN--ETVEEYSLYLGIVEQIAND 187


>gi|238504512|ref|XP_002383487.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
 gi|220690958|gb|EED47307.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
          Length = 368

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 29/196 (14%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L GK     ++       N++  +A  +   +  +   SL+ DD+   D   +RRG P  
Sbjct: 85  LPGKNTVGKVIESLRPWLNISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAA 142

Query: 108 HIQY------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           H++Y      +  T IIA         +I+S  +T L    R +    L+    LQ +  
Sbjct: 143 HVKYGLSQTINSTTYIIA---------KIVSDVQTHL----RPECAKVLSEE--LQTLTL 187

Query: 162 GQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ LD+   F  +     +  ++   KTG           I A+A+ N++  LR     L
Sbjct: 188 GQALDLNWTFNKKCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANATPNDE--LRHLITLL 245

Query: 218 GIIFQLADDLLDCEED 233
           G  +Q+ DD  +   D
Sbjct: 246 GRYYQIRDDYQNLASD 261


>gi|241836196|ref|XP_002415093.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis]
 gi|215509305|gb|EEC18758.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis]
          Length = 288

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 20/191 (10%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +L    Y L + GK+IR+ L         ++      +G  ++ +H  SL+ D      N
Sbjct: 10  ILQPYHYILKIPGKQIRTKLAQAFNYWLKISPEKCQVIGEIVQMLHNASLLQD------N 63

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  +   + I + N +     E            + ++ +L L    G++
Sbjct: 64  SSLRRGVPVAHNIFGVASTINSANYVYFLGLEKCLELDNPRATAVFTEQILELHRGQGME 123

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +I   E+    + K KTG L   A     +M   S+N+    +  G 
Sbjct: 124 -------IYWRDNYICPTESDYSRMVKRKTGGLFGLAV---GLMQLFSENKGNFTKLIG- 172

Query: 216 NLGIIFQLADD 226
            LG+ FQ+ DD
Sbjct: 173 TLGLYFQIRDD 183


>gi|30984142|dbj|BAC53873.2| farnesyl pyrophosphate synthase [Phaseolus lunatus]
          Length = 243

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 18/170 (10%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G  IE +  Y L+ DD+  MDN + RRG+P    +  +V  I A +G+L     I 
Sbjct: 12  ASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRVPKVGMIAANDGVLLRN-HIP 67

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKM 183
              K   +       +L L + +  Q    GQM+D+      E  +          I + 
Sbjct: 68  RILKKHFRGKPYYVDLLDLFNEVEFQTA-SGQMIDLITTLQGEKDLSKYTLTLHRRIVQY 126

Query: 184 KTGALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KT     +   AC    +MA  + +    ++     +G  FQ+ DD LDC
Sbjct: 127 KTAYYSFYLPVAC--ALLMAGDNLDNHVDVKNILVEMGTYFQVQDDYLDC 174


>gi|83766667|dbj|BAE56807.1| unnamed protein product [Aspergillus oryzae]
          Length = 362

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L  K IR   +    S   V   ++  + + I  +H  SL+ DD+   DN   RRG PT 
Sbjct: 79  LPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDIE--DNSVPRRGSPTA 136

Query: 108 HIQYDEVTAIIAGNGLLTYAFE 129
           H  +     I + N     AFE
Sbjct: 137 HTLFGVGQTINSANYTFVCAFE 158


>gi|312087949|ref|XP_003145671.1| geranylgeranyl pyrophosphate synthetase [Loa loa]
 gi|307759165|gb|EFO18399.1| geranylgeranyl pyrophosphate synthetase [Loa loa]
          Length = 306

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 34/204 (16%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +LL+  +Y L L GK++RS L     S   V+      +   +E +H  SL+ DD+   D
Sbjct: 7   QLLAPYQYILKLPGKQLRSQLAKAFNSWLQVDVEVLDSIMTVVEMLHNASLMIDDIE--D 64

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---------FEIISSPKTQLKDNIRSQLM 147
           +  +RRG P  H  Y     I   N +   A         FE +     QL +  R Q  
Sbjct: 65  SSLLRRGLPVTHSIYGIPRTINTANYVYFAALSRCILLGKFEAVKIFTEQLLELHRGQ-- 122

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
                         G+ L  +D      E +   +   KTG L     +   +      +
Sbjct: 123 --------------GKELYWRDTVQCPTEEEYEQMAMQKTGGLFALTIQLMELFGKKQYD 168

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
            K  +R    NL + FQ+ DD ++
Sbjct: 169 FKSLIR----NLAVYFQIRDDYIN 188


>gi|317143053|ref|XP_001818809.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
          Length = 384

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L  K IR   +    S   V   ++  + + I  +H  SL+ DD+   DN   RRG PT 
Sbjct: 101 LPSKNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDI--EDNSVPRRGSPTA 158

Query: 108 HIQYDEVTAIIAGNGLLTYAFE 129
           H  +     I + N     AFE
Sbjct: 159 HTLFGVGQTINSANYTFVCAFE 180


>gi|18313968|ref|NP_560635.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18161541|gb|AAL64817.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 263

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 31/199 (15%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPS 94
           L  A+RY +   GK +R  L+   +   +   L   R+  A   IE +H  SL+ DD+  
Sbjct: 31  LRKAVRYYIETPGKLLRPILLLTFSYTLDRRALMDPRLIQAATIIELLHVVSLLQDDV-- 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML--SLTH 152
           MD    RRG  T  + Y +   I+A + L+               ++IR  + L   +  
Sbjct: 89  MDKHEERRGIKTPRVLYGDDRTILASDWLIA--------------ESIRRAVKLGPEVVE 134

Query: 153 NIG--LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            +    Q +  GQ LD+  E     +      +KT  L+       AI+    +   E  
Sbjct: 135 YLADVAQRLSRGQALDLDGERERAAE------LKTAPLIEATLVLPAIILRRREI-LELA 187

Query: 211 RCFGENLGIIFQLADDLLD 229
           +  G +LG+++Q +DD+ D
Sbjct: 188 KKLGRSLGVLYQYSDDISD 206


>gi|134082876|emb|CAK42706.1| unnamed protein product [Aspergillus niger]
          Length = 619

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 19/207 (9%)

Query: 33  TQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T+H   LL+   Y A L  K +R   +        +       + +  + +H  SL+ DD
Sbjct: 400 TEH---LLAPAEYIASLPSKGVREAFIDALNVWLALPDRFVSVMKSIAKTLHNASLMLDD 456

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +   D   +RRG+P  H  + +   I + N +L  A + +      L+D+    + +  T
Sbjct: 457 IE--DGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVR----LLEDSRCLDIFVEET 510

Query: 152 HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            N+ +     GQ  D+    QDE   E +   + + KTG L           A + +N  
Sbjct: 511 RNLFI-----GQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQKATSKKNRC 565

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDL 234
             L    + +G  FQ+ DD  +  E++
Sbjct: 566 LPLEPLVDLMGEYFQIRDDYKNLAEEV 592


>gi|251795064|ref|YP_003009795.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
 gi|247542690|gb|ACS99708.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
          Length = 306

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 16/158 (10%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R  AA+E     S I DDL   D           H  + +V    A     ++   ++ S
Sbjct: 63  RAAAAVELFILASDILDDLQDGD---------APHQAWSQVPPAAAMQAAASF---MVLS 110

Query: 134 PKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
            +  L+      L+L +    N  L     GQMLD+ +   DE     + + K+ AL+ F
Sbjct: 111 QQAVLELEFDQVLLLRVARMMNGQLLKAANGQMLDLMNAVTDEDSYLAMVQHKSAALIVF 170

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AC +G ++  A +     +  + E +G+  Q+ +D+ D
Sbjct: 171 ACMTGVML--AGREWHPVVAEYAEEVGMAAQIKNDIKD 206


>gi|308801677|ref|XP_003078152.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri]
 gi|116056603|emb|CAL52892.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri]
          Length = 346

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 29/179 (16%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEI 130
           A+ VG  IE +  Y L+ DD+  MD    RRG+P  + Q D ++TAI   +G+L     +
Sbjct: 79  AMVVGWCIEFLQAYFLVADDI--MDESVTRRGQPCWYRQPDVKMTAI--NDGILL-EMML 133

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK--- 184
               K   K       ++ L H++  Q    GQ++D+       +D ++  M   M+   
Sbjct: 134 YKCLKKYCKGLECYHDLVELFHDVTYQ-TASGQLIDLITAPIGIVDLSKYTMEAYMRIVT 192

Query: 185 -TGALMCFACESGAIM---------AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              A   F   +   M         A++  NE     C    LG  FQ+ DD LDC  D
Sbjct: 193 YKTAFYTFYLPAACAMRLCGVKDEAAYSKANEI----CI--KLGQFFQIQDDYLDCYGD 245


>gi|256752080|ref|ZP_05492948.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749090|gb|EEU62126.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 124

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235
            I + KT AL+  +  +GA +A A++ +   LR +   +G  FQ+ DD+LD    EE L 
Sbjct: 5   FIHEHKTAALIEASVCAGAYIAGATEEDIHALREYARLIGFAFQIKDDILDVIGEEEKLG 64

Query: 236 KK 237
           KK
Sbjct: 65  KK 66


>gi|322800773|gb|EFZ21659.1| hypothetical protein SINV_04639 [Solenopsis invicta]
          Length = 348

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 33/210 (15%)

Query: 44  RYALLGGKKIRSF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMD 96
           +Y +  GKK+R   L+    SL + + LT   +         +E +  Y L+ DD+   D
Sbjct: 44  QYTVPKGKKLRGLTLIKVYKSLVSNDQLTEDNIRLVQILAWCVELMQTYILVLDDI--QD 101

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA----------------FEIISSPKTQLKD 140
           +  +RRG+P  H+ Y  V      +G+L  +                  ++ + +  +  
Sbjct: 102 HSLLRRGQPCWHL-YSNVGEAAVNDGVLLESAMYYIIRKHFKGKECYVNLVETFQDIIFK 160

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            +  Q M   + N G +  L    +D  +  I+    +    + T A M FA      M 
Sbjct: 161 TLMGQCMDLYSSNFGKKPNLDLFTIDRHNTIIEIKTAYYTYVLPTFAAMHFAGIKNPEMF 220

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +       +     +G +FQ+ DD LDC
Sbjct: 221 RQA-------KIIALEIGHMFQVQDDYLDC 243


>gi|317156125|ref|XP_001825412.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
          Length = 692

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 11/188 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L  K +R   V        + +    RV +  E +H  SL+ DD+   D+  +RRG+P  
Sbjct: 409 LPSKGVREAFVDAMNVWLVLPNDVVNRVKSIAETLHNASLLLDDIE--DSSPLRRGQPAA 466

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQML 165
           H  + +   I + N LL  A   +     Q   ++  + M  L +  +  L     G+  
Sbjct: 467 HTIFGQGQTINSANYLLIQAMHQVRQLDNQRCMDVFVEEMRNLFIGQSFDLYWTRQGECP 526

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             QDE+++     MI + KTG L           A    N    L      LG  FQ+ D
Sbjct: 527 S-QDEYLE-----MISQ-KTGGLFRLLTRLMTEKASTQHNSTITLDSLVSLLGQYFQIRD 579

Query: 226 DLLDCEED 233
           D  +  ED
Sbjct: 580 DYKNLTED 587


>gi|281413632|ref|ZP_06245374.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
          Length = 371

 Score = 37.4 bits (85), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 49  GGKKIRSFLV--TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R+ L      A+            GAA E     +LIHDD+  +D    RRG P+
Sbjct: 10  GGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LDRSDTRRGMPS 67

Query: 107 VHIQYDEV 114
           VH +++ +
Sbjct: 68  VHRRFESL 75


>gi|219666168|ref|YP_002456603.1| geranylgeranyl pyrophosphate synthase-like protein
           [Desulfitobacterium hafniense DCB-2]
 gi|219536428|gb|ACL18167.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 318

 Score = 37.4 bits (85), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           Q F +   K G+L   AC+ GAI+  A +     L  FG NLGI+ Q+ +DL D
Sbjct: 160 QYFEMAGQKAGSLTACACKIGAILGGAEEPVIHGLEQFGINLGILNQIRNDLND 213


>gi|239610018|gb|EEQ87005.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
           ER-3]
          Length = 405

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 19/184 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR   +T      +V   +   +   +  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 107 GKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDVE--DSSNLRRGVPVAHN 164

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +     I + N +   A E +   K+    NI +  +L+L           GQ +D+  
Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHR---------GQGMDVFW 215

Query: 168 QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D     T+   ++ +  KTG L   A +    +  A  +           +G+IFQ+ D
Sbjct: 216 RDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESDSGIDCVALVNLMGLIFQICD 271

Query: 226 DLLD 229
           D L+
Sbjct: 272 DYLN 275


>gi|89892905|ref|YP_516392.1| hypothetical protein DSY0159 [Desulfitobacterium hafniense Y51]
 gi|89332353|dbj|BAE81948.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 319

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           Q F +   K G+L   AC+ GAI+  A +     L  FG NLGI+ Q+ +DL D
Sbjct: 161 QYFEMAGQKAGSLTACACKIGAILGGAEEPVIHGLEQFGINLGILNQIRNDLND 214


>gi|317036431|ref|XP_001397340.2| geranylgeranyl pyrophosphate synthase [Aspergillus niger CBS
           513.88]
          Length = 696

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 15/156 (9%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SL+ DD+   D   +RRG+P  H  + +   I + N +L  A + +      L+D+
Sbjct: 447 LHNASLMLDDIE--DGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVR----LLEDS 500

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGA 197
               + +  T N+ +     GQ  D+    QDE   E +   + + KTG L         
Sbjct: 501 RCLDIFVEETRNLFI-----GQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMM 555

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A + +N    L    + +G  FQ+ DD  +  E+
Sbjct: 556 QKATSKKNRCLPLEPLVDLMGEYFQIRDDYKNLAEE 591


>gi|119579179|gb|EAW58775.1| hCG2042152 [Homo sapiens]
          Length = 318

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 9/69 (13%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-------IECIHCYSLIHDDLPSMDN 97
           Y  + GK  RS +V   A   N++H  +  V A+        E IH  SL+HDD+  +DN
Sbjct: 82  YFDVKGKAFRSIIVVLMARACNIHHNNSRHVQASQRATALIAEMIHTASLVHDDV--IDN 139

Query: 98  GYIRRGKPT 106
              R+GK T
Sbjct: 140 ARSRKGKHT 148


>gi|59709769|gb|AAW88510.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii]
 gi|59709775|gb|AAW88514.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
          Length = 334

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 23/196 (11%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L  K IRS L         V     L +   I+ +H  SL+ DD+   D+  +RRG P  
Sbjct: 50  LPSKDIRSGLTDAINEFLRVPEEKVLVIKRIIDLLHNASLLIDDI--QDSSKLRRGVPVA 107

Query: 108 HIQYDEVTAIIAGNGLLTY-----AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           H  +     I + N  L Y       E +++P+      I ++ +++L    G++     
Sbjct: 108 HHIFGIAQTINSAN--LAYFIAQRELEKLTNPRAFA---IYNEELINLHRGQGMELHWRE 162

Query: 163 QM-LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +    +DE++      MIQK KTG L   A     ++   S ++ + +    + LG +F
Sbjct: 163 SLHCPTEDEYLR-----MIQK-KTGGLFRLAIR---LLQGESASDDDYVSLI-DTLGTLF 212

Query: 222 QLADDLLDCEEDLPKK 237
           Q+ DD  + + D+  K
Sbjct: 213 QIRDDYQNLQSDIYSK 228


>gi|145344237|ref|XP_001416643.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576869|gb|ABO94936.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 348

 Score = 37.4 bits (85), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 21/175 (12%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEI 130
           A+ VG  IE +  Y L+ DD+  MD    RRG+P  + Q D ++TAI   +G+L     +
Sbjct: 81  AMVVGWCIEFLQAYFLVADDI--MDESVTRRGQPCWYRQPDVKMTAI--NDGILL-EMML 135

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK--- 184
               K   K       ++ L H++  Q    GQ++D+       +D ++  M   M+   
Sbjct: 136 YKCLKKYCKGLECYADLVELFHDVTYQ-TASGQLIDLITAPIGVVDLSKYTMEAYMRIVT 194

Query: 185 -TGALMCFACESGAIM-----AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              A   F   +   M        +  EK    C    LG  FQ+ DD LDC  D
Sbjct: 195 YKTAFYTFYLPAACAMRLCGVKDEAAYEKANEICI--KLGQFFQIQDDYLDCYGD 247


>gi|226480790|emb|CAX73492.1| dimethylallyltranstransferase [Schistosoma japonicum]
          Length = 386

 Score = 37.4 bits (85), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 9/76 (11%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLP 93
           + + Y L  GK+IR  LV     +F   +    R       +G  +E +H   L+ DD+ 
Sbjct: 45  NVVSYNLSSGKRIRGVLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDI- 103

Query: 94  SMDNGYIRRGKPTVHI 109
            +DN  +RRG+P  H+
Sbjct: 104 -IDNSTLRRGQPCWHL 118


>gi|66735446|gb|AAY53905.1| farnesyl pyrophosphate synthase [Panax notoginseng]
          Length = 343

 Score = 37.4 bits (85), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 25/214 (11%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86
           Q  +R+L    Y + GGK  R         L+ E   L +     +  +G  IE +  Y 
Sbjct: 33  QWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGKELSDDEIFLSSALGWCIEWLQAYF 89

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MD+ + RRG+P    +  +V  I   +G+L     I    K   +       
Sbjct: 90  LVLDDI--MDSSHTRRGQPC-WFRLPKVGMIAVNDGILLRN-HIPRILKKHFRQKPYYVD 145

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAI 198
           +L L + +  Q   G QM+D+    + E  +          I + KT     +   + A+
Sbjct: 146 LLDLFNEVEFQTACG-QMIDLITTLVGEKDLSKYSLPIHRRIVQYKTAYYSFYLPVACAL 204

Query: 199 MAHASQNEKERL--RCFGENLGIIFQLADDLLDC 230
           +      EK  L  +     +G  FQ+ DD LDC
Sbjct: 205 LMSGEDLEKHLLDVKDILIEMGTYFQVQDDYLDC 238


>gi|327350942|gb|EGE79799.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 405

 Score = 37.4 bits (85), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 19/184 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR   +T      +V   +   +   +  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 107 GKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDV--EDSSNLRRGVPVAHN 164

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +     I + N +   A E +   K+    NI +  +L+L           GQ +D+  
Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHR---------GQGMDVFW 215

Query: 168 QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D     T+   ++ +  KTG L   A +    +  A  +           +G+IFQ+ D
Sbjct: 216 RDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESDSGIDCVALVNLMGLIFQICD 271

Query: 226 DLLD 229
           D L+
Sbjct: 272 DYLN 275


>gi|307328224|ref|ZP_07607402.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306886058|gb|EFN17066.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 345

 Score = 37.4 bits (85), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 17/152 (11%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL- 138
           E  H  +  HD +   D   +R G       +D   A++ G+ L   A  I++    Q  
Sbjct: 78  ELTHLATHYHDGV--RDETAVRPGARGPDANWDNTVAVLIGDFLFARASHILADLGPQAV 135

Query: 139 ---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
               +  R Q+   +    G +        D +D      +V      +TGAL   +   
Sbjct: 136 RLQAEAFRRQVTGQILETAGPR--------DGRDPVEHHLEVLA---GRTGALTAVSGRL 184

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           GA+++ A  +  + L  +GE LG+   LAD+L
Sbjct: 185 GALVSGADPSAVDALARYGERLGMASHLADEL 216


>gi|300431229|gb|ADK12004.1| farnesyl diphosphate synthase [Aralia elata]
          Length = 342

 Score = 37.4 bits (85), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 24/213 (11%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALRVGAAIECIHCYS 86
           Q  +R+L    Y + GGK  R         L+ E   L +     +  +G  IE +  Y 
Sbjct: 33  QWVERMLD---YNVPGGKLNRGLSVIDSYKLLKEGKELSDDEIFLSSALGWCIEWLQAYF 89

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MD+ + RRG+P    +  +V  I   +G+L     I    K   +       
Sbjct: 90  LVLDDI--MDSSHTRRGQPC-WFRLPKVGMIAVNDGILLRN-HIPRILKKHFRQKPYYVD 145

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTGALMCFACESGAI 198
           +L L + +  Q   G QM+D+    + E  +          I + KT     +   + A+
Sbjct: 146 LLDLFNEVEFQTACG-QMIDLITTLVGEKDLSKYSLPIHRRIVQYKTAYYSFYLPVACAL 204

Query: 199 MAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
           +      EK   ++     +G  FQ+ DD LDC
Sbjct: 205 LMSGGDLEKHTNVKDILIEMGTYFQVQDDYLDC 237


>gi|261198611|ref|XP_002625707.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
           SLH14081]
 gi|239594859|gb|EEQ77440.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
           SLH14081]
          Length = 405

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 19/184 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR   +T      +V   +   +   +  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 107 GKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDV--EDSSNLRRGVPVAHN 164

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            +     I + N +   A E +   K+    NI +  +L+L           GQ +D+  
Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHR---------GQGMDVFW 215

Query: 168 QDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D     T+   ++ +  KTG L   A +    +  A  +           +G+IFQ+ D
Sbjct: 216 RDTLTCPTEEDYLEMVGNKTGGLFRLAIK----LMQAESDSGIDCVALVNLMGLIFQICD 271

Query: 226 DLLD 229
           D L+
Sbjct: 272 DYLN 275


>gi|56756931|gb|AAW26637.1| SJCHGC02430 protein [Schistosoma japonicum]
          Length = 386

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 9/76 (11%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLP 93
           + + Y L  GK+IR  LV     +F   +    R       +G  +E +H   L+ DD+ 
Sbjct: 45  NVVSYNLSSGKRIRGVLVVLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDI- 103

Query: 94  SMDNGYIRRGKPTVHI 109
            +DN  +RRG+P  H+
Sbjct: 104 -IDNSTLRRGQPCWHL 118


>gi|83764459|dbj|BAE54603.1| unnamed protein product [Aspergillus oryzae]
          Length = 358

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 21/192 (10%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L GK     ++       N++  +A  +   +  +   SL+ DD+   D   +RRG P  
Sbjct: 75  LPGKNTVGKVIESLRPWLNISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAA 132

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H++Y     I +     TY   II+   ++++ ++R +    L+    LQ +  GQ LD+
Sbjct: 133 HVKYGLSQTINS----TTY---IIAKVVSEVQTHLRLECAKVLSEE--LQTLTLGQALDL 183

Query: 168 QDEF------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
              F      ++E  V +    KTG           I A+A+ N++  LR     LG  +
Sbjct: 184 NWTFNKTCPSVNEYLVMI--DHKTGGFFRLMLRIMEIEANATPNDE--LRHLITLLGRYY 239

Query: 222 QLADDLLDCEED 233
           Q+ DD  +   D
Sbjct: 240 QIRDDYQNIASD 251


>gi|242212320|ref|XP_002471994.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728918|gb|EED82802.1| predicted protein [Postia placenta Mad-698-R]
          Length = 327

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 22/216 (10%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTECASLFNVNHLTALRVGA 77
           D L    A H + + +D       Y  L    GK +R  ++       +V       +G 
Sbjct: 17  DTLRYTLARHSEWRQSDEKSVLEPYTYLISHSGKDVRGQMINAFNEWLHVPKDQLAIIGR 76

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +  +H  SL+ DD+   D+  +RRG P  H  Y     I   N +   AF+ +S+    
Sbjct: 77  IVGMLHNASLLVDDVE--DDSQLRRGNPVAHKIYGIPQVINTANYVYFQAFQEVSA---- 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLG---GQMLDI--QDEFI--DETQVFMIQKMKTGALMC 190
               +++       H I +  +L    GQ LD+  +D      E +   +   KTG L  
Sbjct: 131 ----LQASCDKYDLHTIVIDELLNLHRGQGLDLLWRDTLTCPSEQEYIAMVNNKTGGLFR 186

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            A     +MA+A+ +           +GI FQ+ DD
Sbjct: 187 LAVR--LMMANATTSVGVDFIPLVNLIGIYFQIRDD 220


>gi|294882140|ref|XP_002769627.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239873179|gb|EER02345.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 377

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 14/171 (8%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL++   +E +  + L  DD+  MD+   RRGKP  + +     AI  G  L +  +  I
Sbjct: 100 ALKLAWCVEILQSHFLTLDDV--MDSSSTRRGKPCWYTKVGVSNAINDGAFLYSTIYPFI 157

Query: 132 ---SSPKTQLKDNIR-----SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-MIQK 182
              +S K  L D I       Q  L   H     GM   Q  D +     E + F  I  
Sbjct: 158 RNIASHKEWLLDVIDIFAHIEQCTLIGQHLDVNGGMQQQQQQDSEHNKEKEIERFNTIAL 217

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGE---NLGIIFQLADDLLDC 230
            KT     +   S  + A   ++  + L    +    LG+ FQ  DD LDC
Sbjct: 218 YKTAFYTYYLPASVGVFASDDKDAVKYLPLIKDVCLKLGVYFQAQDDFLDC 268


>gi|46241300|gb|AAS82870.1| geranyl diphosphate synthase small subunit [Clarkia breweri]
          Length = 300

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQ---- 168
           ++ G+G+L  AFE++++ +    D  RS+ +L +   I    G +G+L G+  ++Q    
Sbjct: 126 LLTGDGMLPLAFELLANSEGA-GDESRSRRILRVIVEISKAAGSEGLLKGEYNELQLGRL 184

Query: 169 -----DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
                 ++ D   +  +   K G L   A   G I+   ++ E E+LR  G  +G+I
Sbjct: 185 AGFTGGDWRDAFWMDHVCGKKEGGLHACAAACGGILGGGTEEEIEKLRKLGYLVGMI 241


>gi|170595477|ref|XP_001902397.1| Polyprenyl synthetase family protein [Brugia malayi]
 gi|158589952|gb|EDP28754.1| Polyprenyl synthetase family protein [Brugia malayi]
          Length = 334

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 11/200 (5%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-----LTALRVGAAIECIHCYSLIHD 90
            DR+     +++ GGK  RS L+ E                   + A +E +  + LI D
Sbjct: 34  RDRIDKLFDHSVCGGKYKRSILLVEAYKALGGRQDEERMKMVTNIAACLELLQSFFLIED 93

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MD G  RRGKP  H + + +      +GLL            ++  ++R     + 
Sbjct: 94  DV--MDEGVNRRGKPCWH-RLEGIGINGINDGLLLDCMVSYILRSNRVSADVRDAFDEAR 150

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              I L  +L G    ++D      Q   I + KT     F     A +  A     E +
Sbjct: 151 RVTI-LGQILDGDTKSVEDCTWQRHQ--SITQHKTSHYTYFTPLQIAALLTAQPLIIEPV 207

Query: 211 RCFGENLGIIFQLADDLLDC 230
           +     LG +FQ  DD +DC
Sbjct: 208 KRIAYLLGYLFQSKDDYMDC 227


>gi|124358874|dbj|BAF45924.1| fusicoccadiene synthase [Phomopsis amygdali]
 gi|124358876|dbj|BAF45925.1| fusicoccadiene synthase [Phomopsis amygdali]
          Length = 719

 Score = 37.0 bits (84), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 75/192 (39%), Gaps = 26/192 (13%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A +  K +R   +        V  +   ++  A+  +H  SL+ DD    DN  +RRGKP
Sbjct: 430 ASMPSKGVRDQFIDALNDWLRVPDVKVGKIKDAVRVLHNSSLLLDDF--QDNSPLRRGKP 487

Query: 106 TVHIQYDEVTAI-IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           + H  +     +  A   ++    +I+     +    + + +M+          +  GQ 
Sbjct: 488 STHNIFGSAQTVNTATYSIIKAIGQIMEFSAGESVQEVMNSIMI----------LFQGQA 537

Query: 165 LDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER------LRCFG 214
           +D+          E + + +   KTG L   A    +++ +A+ NE  R      L    
Sbjct: 538 MDLFWTYNGHVPSEEEYYRMIDQKTGQLFSIAT---SLLLNAADNEIPRTKIQSCLHRLT 594

Query: 215 ENLGIIFQLADD 226
             LG  FQ+ DD
Sbjct: 595 RLLGRCFQIRDD 606


>gi|315024113|gb|ADR83704.1| farnesyl pyrophosphate synthase [Alisma plantago-aquatica]
          Length = 343

 Score = 37.0 bits (84), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 26/233 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALR 74
           +LL   A        + +   + Y + GGK  R   V +   L              +  
Sbjct: 31  ELLEDPAFDFTDDAREWIEKMLDYNVPGGKLNRGLSVVDSYKLLKEGKELSEEELFLSCV 90

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P    +  +V  I A +G++     I    
Sbjct: 91  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRIPKVGLIAANDGIILRN-HIPRML 146

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186
           +   K       +L L + +  Q   G QMLD+      ET +          I + KT 
Sbjct: 147 QRHFKGKPYYVDLLDLFNEVEFQTACG-QMLDLITTHEGETDLSKYKLPVYKRIVQYKTA 205

Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               +   AC    +M+  + ++   ++     +G  FQ+ DD LDC  D PK
Sbjct: 206 YYSFYLPVAC--ALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGD-PK 255


>gi|260363971|ref|ZP_05776710.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030]
 gi|308112584|gb|EFO50124.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030]
          Length = 195

 Score = 37.0 bits (84), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+++  D    E     +   KT  L   A + GAI+  A ++ +  L+ +G+ LG  FQ
Sbjct: 21  QLMNCNDPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQ 80

Query: 223 LADDLLDCEED 233
           L DD++D   D
Sbjct: 81  LIDDVMDYTSD 91


>gi|126650453|ref|ZP_01722676.1| ComQ [Bacillus sp. B14905]
 gi|126592609|gb|EAZ86608.1| ComQ [Bacillus sp. B14905]
          Length = 297

 Score = 37.0 bits (84), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 16/163 (9%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AA+E +     I DDL   D+       P + +       I+A   +   +FE    
Sbjct: 62  KIAAAVELVILSFDIIDDLQDKDSDNSWSRTPELSLNVALAMLIMASKTIDETSFE---- 117

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                      +  +++     L+  + GQ LD+ +   DE     +  +K+G+L   +C
Sbjct: 118 ---------HKRAAITILEECALKS-ISGQQLDLLNNCRDEDSYIHMITLKSGSLTAMSC 167

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             G ++A    +++  +  +G+ +GII Q+ +D+   +   PK
Sbjct: 168 LIGEVLAKGEVSKE--VEAYGKYIGIIQQIKNDIQSLKTWGPK 208


>gi|317140569|gb|ADV03674.1| farnesyl pyrophosphate synthase [Alisma orientale]
          Length = 343

 Score = 37.0 bits (84), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 26/233 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALR 74
           +LL   A        + +   + Y + GGK  R   V +   L              +  
Sbjct: 31  ELLEDPAFDFTDDAREWIEKMLDYNVPGGKLNRGLSVVDSYKLLKEGKELSEEELFLSCV 90

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P    +  +V  I A +G++     I    
Sbjct: 91  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRIPKVGLIAANDGIILRN-HIPRML 146

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186
           +   K       +L L + +  Q   G QMLD+      ET +          I + KT 
Sbjct: 147 QRHFKGKPYYVDLLDLFNEVEFQTACG-QMLDLITTHEGETDLSKYKLPVYKRIVQYKTA 205

Query: 187 ALMCF---ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               +   AC    +M+  + ++   ++     +G  FQ+ DD LDC  D PK
Sbjct: 206 YYSFYLPVAC--ALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGD-PK 255


>gi|320012344|gb|ADW07194.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 374

 Score = 37.0 bits (84), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L   CA        +A+    A+E +H +SL+HDD+  MD    RR + TV  
Sbjct: 85  GKGVRQALAVLCAEAAGAPPDSAVAAAVAVELVHTFSLLHDDI--MDGDGTRRQRETVWK 142

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            Y    A++AG+ LL  A + ++     L      +L  +L+      G+  GQ  D+  
Sbjct: 143 AYGTGPAVLAGDALLALAVQTLAEAPGPLTAVAVGRLSETLS------GLARGQAEDLLL 196

Query: 168 ------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                     +   +   + ++KTG L+  A   G ++  A +     L   G +LG+ F
Sbjct: 197 AARPWTGPGAVRTDEYRAMAELKTGTLLGCAAALGGLLGGAPEPVVAALDRAGRHLGVAF 256

Query: 222 QLADDLLDCEED 233
           Q  DDLL    D
Sbjct: 257 QAVDDLLGIWGD 268


>gi|322818356|gb|EFZ25796.1| polyprenyl synthase, putative [Trypanosoma cruzi]
          Length = 222

 Score = 37.0 bits (84), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 30/55 (54%)

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           E  V  I   KTGA+    C    I+  AS+ + + +  FG+ +G+ +Q+ DD+L
Sbjct: 58  EDAVKFIHTCKTGAICGAICSFACILTDASEEDTQAMEEFGKAIGLAYQIIDDVL 112


>gi|225678401|gb|EEH16685.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
           brasiliensis Pb03]
          Length = 407

 Score = 37.0 bits (84), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+       +V   +   +   +  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 107 GKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLVDDV--EDSSNLRRGVPVAHN 164

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A E +   +     ++  + +L+L    G+       +    +
Sbjct: 165 IFGTAQTINSANYVYFLALEEVQKLRNPNAIDVYVKELLNLHRGQGMDVFWRDTLTCPTE 224

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +E++D     M+   KTG L   A +   +M   S  E + +      +G+IFQ+ DD L
Sbjct: 225 EEYLD-----MVGN-KTGGLFRLAIK---LMQAESGTEIDCV-ALANLMGLIFQICDDYL 274

Query: 229 D 229
           +
Sbjct: 275 N 275


>gi|322796022|gb|EFZ18646.1| hypothetical protein SINV_13860 [Solenopsis invicta]
          Length = 77

 Score = 37.0 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           NV   T  ++    E IH  SL+HDD+  +D   IRRGKP+V++ + +
Sbjct: 30  NVLLQTQRQIAMIAEMIHSASLLHDDV--IDQSDIRRGKPSVNVMWSQ 75


>gi|322794010|gb|EFZ17248.1| hypothetical protein SINV_11878 [Solenopsis invicta]
          Length = 354

 Score = 37.0 bits (84), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 25/208 (12%)

Query: 42  AIRYALLGGKKIRSF-LVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPS 94
            + Y +  GKKIR   L+    SL   + LT      A  +   +E +  Y L+ DD+  
Sbjct: 48  VLEYNVPNGKKIRGLTLICVYKSLVPNDQLTEDNIRLAQILAWCVEMMQAYLLVLDDI-- 105

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNG-LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            D    RRG+P  H +Y+ +      +G LL  A   I     Q K+   S   L  T  
Sbjct: 106 QDQSLFRRGQPCWH-RYNNIGEAAVNDGVLLESAMYYILRKHFQGKE---SYCNLVETFQ 161

Query: 154 IGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKT-----GALMCFACESGAIMAHASQN 205
             +   L GQ LD+     D+     +F + ++ +      A   +     A M  A   
Sbjct: 162 DAIFKTLMGQCLDLNSTNFDKKPNLNLFTMDRLNSVIKFKTAHYTYVLPIIAAMHLAGIK 221

Query: 206 EKE---RLRCFGENLGIIFQLADDLLDC 230
           + E   + +     +G +FQ+ DD LDC
Sbjct: 222 DSEMFNQAQAILLEIGRLFQVQDDYLDC 249


>gi|18307877|gb|AAL67733.1|AF456136_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 289

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)

Query: 65  FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+   +TA+ + A+ IE +   + I DD+   DN           ++ D    I A   L
Sbjct: 41  FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATAL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T + ++IS     L  N    L L+L +   LQ  L GQ  D+      E++   + K+
Sbjct: 95  YTLSLQVIS-----LVSNNPQHLSLTLQY--SLQS-LQGQHEDLNVTISSESEYIEMIKL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+G+L+      G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 147 KSGSLVTLPSVLGVYLATGEIN--ETVEEYSRYLGIVEQIAND 187


>gi|229543109|ref|ZP_04432169.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus
           coagulans 36D1]
 gi|229327529|gb|EEN93204.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus
           coagulans 36D1]
          Length = 289

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           GQ  DI++  + E +   + K K+GAL   AC  GA++A  +  +   +  +   +GI  
Sbjct: 113 GQFADIRNAPLKEEEYIAVIKQKSGALCALACLCGAMLA-GNTTDLHLIGEYATGIGICA 171

Query: 222 QLADDLLD 229
           QL +DL D
Sbjct: 172 QLENDLDD 179


>gi|118088191|ref|XP_424685.2| PREDICTED: similar to geranylgeranyl diphosphate synthase [Gallus
           gallus]
          Length = 420

 Score = 36.6 bits (83), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 19/181 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L        NV       +    E +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 144 GKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDI--EDNSKLRRGFPVAHS 201

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            Y   + I   N +     E + +        + ++ +L L           GQ LDI  
Sbjct: 202 IYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHK---------GQGLDIYW 252

Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D +    E +   +   KTG L   A     +M   S N K+ L+     LG+ FQ+ D
Sbjct: 253 RDTYTCPTEAEYKAMVLQKTGGLFGLAV---GLMQLFS-NYKKDLKPLLNTLGLFFQIRD 308

Query: 226 D 226
           D
Sbjct: 309 D 309


>gi|269103559|ref|ZP_06156256.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163457|gb|EEZ41953.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 189

 Score = 36.6 bits (83), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  D    E     +   KT  L   A +  AI+A AS   +
Sbjct: 1   MSAATNVIAEGEVQ-QLMNCNDPDTTEESYMEVIYSKTARLFEAATQVAAIIAKASPEVE 59

Query: 208 ERLRCFGENLGIIFQLADDLLD 229
              + +G  LG  FQL DD+LD
Sbjct: 60  TAFQDYGRYLGTAFQLIDDVLD 81


>gi|328767086|gb|EGF77137.1| hypothetical protein BATDEDRAFT_14267 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 290

 Score = 36.6 bits (83), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 27/191 (14%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G++IR+ L+      F V       +   +  +H  SL+ DD+   D   +RRG P  H 
Sbjct: 14  GQEIRNLLIEGFQKWFQVPTEKLAIIKQVVAMLHTASLLVDDVE--DGSDLRRGVPVTHK 71

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   + I A N    YA+ I       LKD    +++ + T  + L  +  G  +  +D
Sbjct: 72  IFGVASTINAAN----YAYFIALENVLMLKD---VRIVQAFTEELQLLHLGQGMEIHWRD 124

Query: 170 EFI--DETQVFMIQKMKTGAL-------MCFACESGAIMAHASQNEKERLRCFGENLGII 220
             +   E+    + + KTG L       M    ES A + +               +G+ 
Sbjct: 125 TVVCPSESDYLKMVENKTGGLLRLGVRMMQLDIESPAALEYIK---------LVNLIGVF 175

Query: 221 FQLADDLLDCE 231
           +Q+ DD L+ +
Sbjct: 176 YQVRDDYLNLK 186


>gi|242774766|ref|XP_002478507.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC
           10500]
 gi|218722126|gb|EED21544.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC
           10500]
          Length = 392

 Score = 36.6 bits (83), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  ++    +   V   +   +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 100 GKDIRKQMIAAFNAWLKVPESSLAIITKVVAMLHNASLLIDDVE--DNSVLRRGIPVAHN 157

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A + +    +    +I ++ +L+L    G+       +    +
Sbjct: 158 IFGTAQTINSANYVYFLALQEVRKLNSVTAMDIYTEELLNLHKGQGMDLFWRDTLTCPTE 217

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +E+++     M+   KTG L   A +    +  A  +           +G+IFQ+ DD L
Sbjct: 218 EEYLE-----MVDN-KTGGLFRLAVK----LMQAESDTGRDCVPLVNVMGLIFQICDDYL 267

Query: 229 D 229
           +
Sbjct: 268 N 268


>gi|290976635|ref|XP_002671045.1| predicted protein [Naegleria gruberi]
 gi|284084610|gb|EFC38301.1| predicted protein [Naegleria gruberi]
          Length = 226

 Score = 36.6 bits (83), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK  RS L+      F ++      + + I+ +H  SL+ DD+   DN  +RRGKP  H
Sbjct: 30  NGKGFRSKLIDAFNEWFKLSEDELNVIKSIIDKLHNASLLVDDIE--DNSKLRRGKPCAH 87

Query: 109 IQYDEVTAIIAGN 121
           + Y     I   N
Sbjct: 88  LIYGTPATINCAN 100


>gi|169829787|ref|YP_001699945.1| transcriptional regulator of comG and srfA [Lysinibacillus
           sphaericus C3-41]
 gi|168994275|gb|ACA41815.1| transcriptional regulator of comG and srfA [Lysinibacillus
           sphaericus C3-41]
          Length = 297

 Score = 36.6 bits (83), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 69/163 (42%), Gaps = 16/163 (9%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AA+E +     I DDL   D+       P + +       I+A   +   +FE    
Sbjct: 62  KIAAAVELLILSFDIIDDLQDKDSDNSWSRTPELSLNVALAMLIMASKTIDETSFE---- 117

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                      +  + +     L+  + GQ LD+ +   DE     +  +K+G+L   +C
Sbjct: 118 ---------HKRAAIKILEECALKS-ISGQQLDLLNNCRDEDSYVQMITLKSGSLTAMSC 167

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             G ++A    +++  +  +G+ +GII Q+ +D+   +   PK
Sbjct: 168 LIGEVLAKGEVSQE--VEAYGKYIGIIQQIKNDIQSLKAWGPK 208


>gi|256084091|ref|XP_002578266.1| dimethylallyltransferase; farnesyl pyrophosphate synthase;
           geranyltranstransferase [Schistosoma mansoni]
 gi|238663632|emb|CAZ34504.1| dimethylallyltransferase [Schistosoma mansoni]
          Length = 401

 Score = 36.6 bits (83), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDN 97
           Y L  GK+IR  LV     +F+  +  + +       +G  +E +H   L+ DD+  +DN
Sbjct: 49  YNLSSGKRIRGVLVVLSYMVFSNKNENSRKNLSCVYLIGWCVELLHAGFLVLDDI--IDN 106

Query: 98  GYIRRGKPTVH-IQYDEVTAIIAGN 121
             +RRG+P  H  Q D    +I  N
Sbjct: 107 STLRRGQPCWHCTQIDSNRGLIGVN 131


>gi|317137331|ref|XP_001727659.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
          Length = 371

 Score = 36.6 bits (83), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 21/195 (10%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +L+   Y A L  K +R   +        V   T   + +    +H  SL+ DDL   D 
Sbjct: 76  VLAPYNYIAGLPSKNVREIFIQGIHIWIQVPQPTLESIKSITNILHQSSLMFDDLE--DE 133

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKP  H+ Y     I +      YA     S   +L  +  +++ +       LQ
Sbjct: 134 SQLRRGKPATHMLYGPAQTINSA----VYALVNTFSEVQRLDSSETTEIFID-----ELQ 184

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQ-KMKTGAL--MCFACESGAIMAHASQNEKERLR 211
            +  GQ  D+  ++   I   + +M+    KTG L  +C        ++     E   L 
Sbjct: 185 NLHCGQSFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQAKSISSGPHLE---LT 241

Query: 212 CFGENLGIIFQLADD 226
            F   LG  FQ+ DD
Sbjct: 242 HFVSLLGRFFQIRDD 256


>gi|238499299|ref|XP_002380884.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus
           flavus NRRL3357]
 gi|220692637|gb|EED48983.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus
           flavus NRRL3357]
          Length = 273

 Score = 36.6 bits (83), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 23/190 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS L+        V +     +   I+ +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 16  GKDIRSKLIDAFNEFLEVPNDKLDVIKRIIDLLHNASLLIDDI--QDSSTLRRGVPVAHS 73

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQML 165
            +  V  I     L  YA+ +     T L +    +I ++ +L L    G++       L
Sbjct: 74  IFGVVQII----NLANYAYFVAQRELTNLTNPLSLSIYTEELLHLHRGQGME-------L 122

Query: 166 DIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             +D      E +   +   KTG L   A      +  A            E LG++FQ+
Sbjct: 123 HWRDTLQCPSEEEYIEMALDKTGGLFRLAIR----LMQAESASGTDYVPLVETLGLLFQI 178

Query: 224 ADDLLDCEED 233
            DD  + + D
Sbjct: 179 RDDYQNLQSD 188


>gi|83770687|dbj|BAE60820.1| unnamed protein product [Aspergillus oryzae]
          Length = 362

 Score = 36.6 bits (83), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 21/195 (10%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +L+   Y A L  K +R   +        V   T   + +    +H  SL+ DDL   D 
Sbjct: 67  VLAPYNYIAGLPSKNVREIFIQGIHIWIQVPQPTLESIKSITNILHQSSLMFDDLE--DE 124

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKP  H+ Y     I +      YA     S   +L  +  +++ +       LQ
Sbjct: 125 SQLRRGKPATHMLYGPAQTINSA----VYALVNTFSEVQRLDSSETTEIFID-----ELQ 175

Query: 158 GMLGGQMLDIQDEF---IDETQVFMIQ-KMKTGAL--MCFACESGAIMAHASQNEKERLR 211
            +  GQ  D+  ++   I   + +M+    KTG L  +C        ++     E   L 
Sbjct: 176 NLHCGQSFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQAKSISSGPHLE---LT 232

Query: 212 CFGENLGIIFQLADD 226
            F   LG  FQ+ DD
Sbjct: 233 HFVSLLGRFFQIRDD 247


>gi|325185255|emb|CCA19743.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 293

 Score = 36.6 bits (83), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L GK IR  LV       NV   T+  +   +  +H  SL+ DD+   DN  +RRG+P  
Sbjct: 19  LPGKNIRGKLVDAFQLWLNVAPGTSKAIKTIVNGLHDASLLIDDIE--DNSDLRRGRPVA 76

Query: 108 HIQY 111
           H  Y
Sbjct: 77  HHIY 80


>gi|55710092|gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]
          Length = 342

 Score = 36.6 bits (83), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 87/225 (38%), Gaps = 21/225 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHLTALR 74
           DLL   A          +   + Y + GGK  R         L+ E   L +   + +  
Sbjct: 18  DLLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKEGKELSDDEIVLSSA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD  + RRG+P    +  +V  I   +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPC-WFRIPKVGMIAINDGILLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--------IQKMKTG 186
           K   +       +L L + +  Q   G QM+D+    + E  +          I + KT 
Sbjct: 134 KKHFRQKPYYVDLLDLFNEVEFQTACG-QMIDLITTLVGEKDLSKYSLPIHRRIVQYKTA 192

Query: 187 ALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDC 230
               +   + A++      EK   ++     +G  FQ+ DD LDC
Sbjct: 193 YYSFYLPVACALLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDC 237


>gi|302543684|ref|ZP_07296026.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
          53653]
 gi|302461302|gb|EFL24395.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
          53653]
          Length = 86

 Score = 36.6 bits (83), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 44 RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
          RYALL  GK +R  L+ E A      +  +L     +E +H  SL+HDD
Sbjct: 38 RYALLPAGKLLRPLLLVESARAVGGGYEESLPAALGVEYLHAGSLVHDD 86


>gi|215480227|gb|ACJ67458.1| quorum sensing protein [Bacillus subtilis]
 gi|215480229|gb|ACJ67459.1| quorum sensing protein [Bacillus subtilis]
          Length = 272

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A IE +     I+DDL   DNG        V ++ D   A+ A   L T + +++S  
Sbjct: 52  LAAGIELLILSFDIYDDLEDQDNG------SAVWMKIDSSIALNAVTALYTLSIQVMSQA 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
             + +    SQ +L    N  LQ  + GQ  DI +    E     + K K+GAL    C 
Sbjct: 106 SHEPE---FSQEIL----NFALQS-IQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCV 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G ++A    +    +  +   LGII Q+ +D
Sbjct: 158 MGVMLATGKYH--PIVASYSYELGIIAQIEND 187


>gi|198436974|ref|XP_002128313.1| PREDICTED: similar to farnesyl pyrophosphate synthetase [Ciona
           intestinalis]
          Length = 348

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 85/215 (39%), Gaps = 25/215 (11%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECIHCYSLIHD 90
           +R+   + Y    GK+ R   V         + ++      AL +G A+E +    L+ D
Sbjct: 38  ERIKDLLEYNAPHGKRTRGLTVVAAFKTIAGDGISEDEMKLALTMGWAVEILQASFLVAD 97

Query: 91  DLPSMDNGYIRRGKPTVHIQYDE-VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DL  MD    RRG+   ++  +    A+  G  L T  F +I   +   K       +  
Sbjct: 98  DL--MDQSKTRRGQACWYLNPNVGYQAVNDGMILETCVFTLI---RQHCKGKAFYADIFD 152

Query: 150 LTHNIGLQGMLGGQMLDIQDE--------FIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           L H + L  ++G Q LD++             ET+   I K KT A   F          
Sbjct: 153 LFHKVILNTLMG-QSLDMEASEQPTVDFTLFTETKHAAIIKYKT-AFYSFYLPVAIAFYM 210

Query: 202 ASQNEKE--RLRC-FGENLGIIFQLADDLLDCEED 233
           A  N+++     C     +G +FQ+ DD LDC  D
Sbjct: 211 AGINDEQCHTAACDILTKIGCLFQIQDDYLDCYGD 245


>gi|38684029|gb|AAR27053.1| farnesyl diphosphate synthetase [Ginkgo biloba]
          Length = 390

 Score = 36.2 bits (82), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 29/209 (13%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK  R   V +   L                 +G  IE +  Y L+ DD+  MD 
Sbjct: 89  YTVPGGKLNRGLSVIDSYRLLKTGKEITEDEVFLGCVLGWCIEWLQAYFLVLDDI--MDG 146

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLL--TYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
            + RRG+P    +  +V  I A +G+L  T+   I+   K   +       +  L + + 
Sbjct: 147 SHTRRGQP-CWFRLPQVGLIAANDGILLRTHISRIL---KLHFQTKPYYVDLCDLFNEVE 202

Query: 156 LQGMLGGQMLDI---QDEFIDETQVFM-----IQKMKTGALMCF---ACESGAIMAHASQ 204
            Q    GQMLD+    +  ID  +  M     I + KT     +   AC    +MA  + 
Sbjct: 203 FQ-TASGQMLDLITTHEGAIDLAKYKMPTYLRIVQYKTAYYSFYLPVAC--ALLMAGENL 259

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
           +    ++     +G  FQ+ DD LDC  D
Sbjct: 260 DNFVAVKNILVQMGTYFQVQDDYLDCFGD 288


>gi|313636097|gb|EFS01975.1| polyprenyl synthetase [Listeria seeligeri FSL S4-171]
          Length = 157

 Score = 36.2 bits (82), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT  L   +C SGA  + AS+    +    G  LG+ FQ+ DD+LD
Sbjct: 6   KTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLD 51


>gi|300707872|ref|XP_002996129.1| hypothetical protein NCER_100832 [Nosema ceranae BRL01]
 gi|239605400|gb|EEQ82458.1| hypothetical protein NCER_100832 [Nosema ceranae BRL01]
          Length = 305

 Score = 36.2 bits (82), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 10/77 (12%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDDL 92
           ++   I Y + GGK +R  +++      N + L  L      VG  +E  H   ++ DD+
Sbjct: 25  KIFEMINYNISGGKNVRFDILSHVT---NNSKLCVLEEDKFLVGFCMELFHASFILSDDI 81

Query: 93  PSMDNGYIRRGKPTVHI 109
             +DN  IRR KP  H+
Sbjct: 82  --VDNSLIRRNKPCFHL 96


>gi|294658024|ref|XP_460338.2| DEHA2E23870p [Debaryomyces hansenii CBS767]
 gi|199433130|emb|CAG88623.2| DEHA2E23870p [Debaryomyces hansenii]
          Length = 346

 Score = 36.2 bits (82), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 81/221 (36%), Gaps = 30/221 (13%)

Query: 35  HNDRLLSAIR--YALLGG-----KKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCY 85
           HND +   I   Y  L G       IR+  +     L+    +H    ++G  I   H  
Sbjct: 15  HNDEIPKCISEPYDYLEGIPSNNNNIRATFLNAFNDLYYQIEDHKLLDKIGEIISIFHNS 74

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR-- 143
           SL+ DD+   D+   RRG PT H  Y     I  GN +   A +   +      + I   
Sbjct: 75  SLLIDDIE--DDSSFRRGLPTAHTLYGTPLTINCGNLMYFIALQKAQNELPMYYNKIHDG 132

Query: 144 -----------SQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
                      SQ+    ML+L H  GL          IQ+   +  +   +   KTG L
Sbjct: 133 DVDVKSLTYQISQILVDEMLNLHHGQGLDIYWRDSGDYIQNHLPEIDEYLKMVMNKTGGL 192

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             F      +   +   +   +      LGII+Q+ DD L+
Sbjct: 193 --FRLSVKLLEVFSPTFKSTSVIPLANLLGIIYQIRDDYLN 231


>gi|119494797|ref|XP_001264204.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
 gi|119412366|gb|EAW22307.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
          Length = 397

 Score = 36.2 bits (82), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 20/193 (10%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A + GK+IR  L+      + V+      + A +   H  SL+ DD+   D+  +RRG P
Sbjct: 115 AGIPGKEIRRKLLEAFNHWYKVDEQPCQAIAATVGMAHNASLLIDDI--QDSSKLRRGVP 172

Query: 106 TVHIQYDEVTAIIAGNGLLTYA----FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
             H  Y     I + N +   A    F + + P+     ++ ++ M++L    G++    
Sbjct: 173 CAHEVYGVAQTINSANYVYFLAQDQLFRLRNWPQAI---SVFNEEMVNLHRGQGMELFWR 229

Query: 162 GQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             +L    D+++      MI   KTG L   A      +   S      +    + LG+ 
Sbjct: 230 DNLLPPSMDDYLQ-----MIAN-KTGGLFRMAVR----LLQTSSRHVVDVEQLVDVLGLY 279

Query: 221 FQLADDLLDCEED 233
           FQ+ DD  + +E+
Sbjct: 280 FQILDDYKNVKEE 292


>gi|119490120|ref|XP_001262975.1| polyprenyl synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119411135|gb|EAW21078.1| polyprenyl synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 668

 Score = 36.2 bits (82), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           +  K  R  L+    + FNV   + + +      +H  SL+ DD+   D   +RRGKP V
Sbjct: 398 MPSKGFRHHLIDALQTWFNVPERSLMLISGVASLLHEASLMLDDI--QDGSLLRRGKPAV 455

Query: 108 H 108
           H
Sbjct: 456 H 456


>gi|313619071|gb|EFR90878.1| geranyltranstransferase [Listeria innocua FSL S4-378]
          Length = 94

 Score = 36.2 bits (82), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 2   QTKRLRIFAENIGIGFQISDDILDVIGDETK 32


>gi|154509178|ref|ZP_02044820.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798812|gb|EDN81232.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC
           17982]
          Length = 367

 Score = 36.2 bits (82), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 42  AIRYALLGGKKIRSFLV---TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           A+  ++ GGK+ R+ +       +S  +V  ++   + AA+E     +L+HDD+  +D  
Sbjct: 41  AVLASVSGGKRFRALMAHVGYALSSGTSVEEVSLPHLSAALELYQASALVHDDI--IDKA 98

Query: 99  YIRRGKPTVH 108
             RRG PT H
Sbjct: 99  DERRGMPTPH 108


>gi|62288319|gb|AAX78435.1| farnesyl diphosphate synthase [Dendroctonus jeffreyi]
          Length = 429

 Score = 36.2 bits (82), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 92/244 (37%), Gaps = 29/244 (11%)

Query: 10  QENSKRIDTILDDLL--LQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLF 65
           +E S+    +  DL+  L      Q  H+   R    ++Y    GKK R  ++     + 
Sbjct: 87  KEQSRDFMALFPDLVRELTEVGKSQELHDVMRRFARVLQYNTPTGKKNRGLIILSTYRML 146

Query: 66  -NVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            +   LT   +      G   E +H Y LI DD+  MD    RRG      Q      + 
Sbjct: 147 EDPEKLTPENIRLASILGWCAEMVHAYVLILDDI--MDGSETRRGALCWFRQSG--IGLT 202

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---------QD 169
           A N  +     +    K  LKD+     ++ L H   L+  LG Q LD          + 
Sbjct: 203 AVNDAVMIENAVYLLIKRHLKDHPMYVPLMELFHEGNLKTTLG-QSLDAMCLDTNGKPKL 261

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR---CFGENLGIIFQLADD 226
           +    ++   I K KT A   F       M  A  +++E+ R        +G  FQ+ DD
Sbjct: 262 DMFTMSRYTSIVKYKT-AFYSFQMPVAIAMYLAGMSDEEQHRQAKTILMEMGQFFQIQDD 320

Query: 227 LLDC 230
            LDC
Sbjct: 321 FLDC 324


>gi|282158091|ref|NP_001164089.1| farnesyl pyrophosphate synthase [Tribolium castaneum]
          Length = 425

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 24/211 (11%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRV------GAAIECIHCYSLIHD 90
           R   A+ Y +  GKK R   V     +     +LT   +      G  +E +  + L+ D
Sbjct: 116 RYAKALHYNVPNGKKNRGLAVIAAYKMLEKEENLTPENIRLANIMGWCVELLQGFFLVTD 175

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +D   +RRG P  + + D  T + A N  +     I +  K     +      + L
Sbjct: 176 DI--IDRSEMRRGMPCWYKKDD--TGLNAFNDAILLEHGIYTLLKRHFSQHHCYVPTMEL 231

Query: 151 THNIGLQGMLGGQMLDI---QD-----EFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            H++ L+  +G Q LD    +D     E     +   I K KT A   F       M  A
Sbjct: 232 FHDVTLKTSMG-QALDCLCNKDGKPNLELFTMNKYNSIVKYKT-AYYTFQLPVALAMYMA 289

Query: 203 SQNEKE---RLRCFGENLGIIFQLADDLLDC 230
           +  + E   + +     +G+ FQ+ DD LDC
Sbjct: 290 NLYDPEMHRQAKTILMEMGLFFQIQDDFLDC 320


>gi|146319409|ref|YP_001199121.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
 gi|145690215|gb|ABP90721.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
          Length = 168

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 28/51 (54%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           KT  L   AC+ G+ +   S+ +       G+ LG+ FQL DDL+D + D+
Sbjct: 18  KTAFLFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDV 68


>gi|311069671|ref|YP_003974594.1| isoprenyl-trasferase [Bacillus atrophaeus 1942]
 gi|310870188|gb|ADP33663.1| isoprenyl-trasferase [Bacillus atrophaeus 1942]
          Length = 289

 Score = 35.8 bits (81), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + + IE +   + I DD+   DN           ++ D    I A   L T + ++IS  
Sbjct: 52  LASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATALYTLSLQVISLV 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               +        LSLT    LQ  L GQ +D+      E++   + K+K+G+L+     
Sbjct: 106 SNNPQ-------HLSLTLQYSLQS-LQGQHVDLTLTVSSESEFIEMIKLKSGSLVTLPSV 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 158 LGVYLATGEFN--ETVDEYSHYLGIVEQIAND 187


>gi|18307881|gb|AAL67736.1|AF456137_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 289

 Score = 35.8 bits (81), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 17/163 (10%)

Query: 65  FNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+   +TA+ + A+ IE +   + I DD+   DN           ++ D    I A   L
Sbjct: 41  FDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATAL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T + ++IS     L  N    L ++L +   LQ  L GQ  D+      E++   + K+
Sbjct: 95  YTLSLQVIS-----LVSNNPQHLSMTLQY--SLQS-LQGQHEDLNVTISSESEYIEMIKL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+G+L+      G  +A    N  E +  +   LGI+ Q+A+D
Sbjct: 147 KSGSLVTLPSVLGVYLATGEIN--ETVEEYSRYLGIVEQIAND 187


>gi|169763336|ref|XP_001727568.1| farnesyltranstransferase [Aspergillus oryzae RIB40]
 gi|238489227|ref|XP_002375851.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357]
 gi|83770596|dbj|BAE60729.1| unnamed protein product [Aspergillus oryzae]
 gi|220698239|gb|EED54579.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357]
          Length = 389

 Score = 35.8 bits (81), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 19/184 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+        V   +   +   +  +H  SL+ DD+   D   +RRG P  H 
Sbjct: 97  GKDIRRQLINAFNEWLKVPAESLAIITKVVTMLHTASLLIDDVE--DCSILRRGAPVAHN 154

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-- 167
            Y     I + N +   A + +         +I  Q +L+L           GQ +D+  
Sbjct: 155 IYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQELLNLHR---------GQGMDLFW 205

Query: 168 QDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +D      E +   +   KTG L   A +   +M   S   K+ +      LG+IFQ+ D
Sbjct: 206 RDTLTCPSEEEYLEMVGNKTGGLFRLAIK---LMQAESATGKDCVSLVNV-LGLIFQICD 261

Query: 226 DLLD 229
           D L+
Sbjct: 262 DYLN 265


>gi|157111697|ref|XP_001651688.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
 gi|108878318|gb|EAT42543.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
          Length = 289

 Score = 35.8 bits (81), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           + GK+ RS +        NV     ++VG  I+ +H  SL+ DD+   D+  +RRG P  
Sbjct: 12  IPGKQFRSRMAVALDHWLNVPFDKMVKVGEIIQLLHNGSLLIDDI--QDSSVLRRGVPAA 69

Query: 108 H 108
           H
Sbjct: 70  H 70


>gi|219122674|ref|XP_002181666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406942|gb|EEC46880.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 330

 Score = 35.8 bits (81), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 21/214 (9%)

Query: 27  TASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL--RVGAAIECIH 83
            A  +  Q +  LL A RY   + GK +R  L+ +C  L+     T +   +   +  +H
Sbjct: 13  VAPLLPHQSDPSLLEAFRYINSVPGKDVRGKLI-DCFQLWLKVESTEILDSIKDIVGDLH 71

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   DN  +RRG P  H  +     I   N +   A E + +  +     + 
Sbjct: 72  NASLLIDDIE--DNSKLRRGNPVAHSIFGIPQVINCSNYVYFLALEKVHALNSPTAMQVF 129

Query: 144 SQLMLSL----THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
              +L+L     H+I  +  +             E +   + + KTG L   A   G + 
Sbjct: 130 VGELLNLHRGQGHDIAWRDSIRCPT---------EGEYLTMVQDKTGGLFRLAV--GLMQ 178

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A+ +          NL + FQ+ DD ++  ++
Sbjct: 179 CFATTHRDTDFSNLVNNLAMYFQIRDDFINLADE 212


>gi|322693895|gb|EFY85740.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium acridum
           CQMa 102]
          Length = 331

 Score = 35.8 bits (81), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 39/198 (19%)

Query: 48  LGGKKIRSFLVTECASLFN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           L GK +RS ++    S FN      V+ L  ++    I  +H  SL+ DD+   D+  +R
Sbjct: 50  LPGKDVRSKMI----SAFNEWLCIPVDKLEVIK--RIIMLLHNASLLIDDI--QDSSKLR 101

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQ 157
           RG P  H  +     I A N    YA+ +      +L D     I ++ +LSL       
Sbjct: 102 RGLPVSHHIFGVPQTINAAN----YAYFLAQQELPKLGDPKAFEIYTEELLSLHR----- 152

Query: 158 GMLGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
               GQ +DI      +   E + F +   KTG L   A     +M  AS    + +   
Sbjct: 153 ----GQGMDIYWREASKCPTEEEYFSMVSHKTGGLFRLAIR---LMQLASDKNCDFVPLV 205

Query: 214 GENLGIIFQLADDLLDCE 231
              LG+IFQ+ DD L+ +
Sbjct: 206 NV-LGVIFQIRDDYLNLQ 222


>gi|299756412|ref|XP_001829313.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130]
 gi|298411665|gb|EAU92273.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130]
          Length = 479

 Score = 35.8 bits (81), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 35/178 (19%)

Query: 71  TALRVGAAIECIHCYSLIHDDL------PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           T +R+   +E IH   L+H ++      PS D+             +    +I+ G+ LL
Sbjct: 222 TQMRLAQIVEMIHVALLLHQNISDASKSPSSDS----------QNPFGNKLSILGGDFLL 271

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---------DET 175
             A  ++S     L      +L+ S+  N+     LG  M  +Q   +         +E 
Sbjct: 272 GRASTVLS----HLGGGEVVELIASVISNLVEGEFLG--MDKVQTPGLGVMEGPRTREEA 325

Query: 176 QVFMIQK--MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLD 229
               ++K  +K+ +LM     +  ++    +NE  KE    +G +LGI +QL +D LD
Sbjct: 326 WDLYLRKTYLKSASLMAKGARASVVLGGCGENEVWKEVAYAYGRSLGIAYQLIEDTLD 383


>gi|157693593|ref|YP_001488055.1| hypothetical protein BPUM_2840 [Bacillus pumilus SAFR-032]
 gi|157682351|gb|ABV63495.1| hypothetical protein BPUM_2840 [Bacillus pumilus SAFR-032]
          Length = 307

 Score = 35.8 bits (81), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 20/157 (12%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE +   + I DD+   D    +   P +  Q     A+ A N L   +F + S 
Sbjct: 64  QLAAGIELLILSADILDDIEDQD----KDSYPWMRCQ--SGVAMNAANVLFALSFGVFSK 117

Query: 134 --PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
               T+L +++ S  + S+           GQ LD+  E  +E     I ++K G+L   
Sbjct: 118 LDHATELINSVYSYSIQSMQ----------GQHLDMTVEPENEQDCLNIMRLKAGSLFVL 167

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            C  G I+A  S  +K  +  +   LG+  QL +D L
Sbjct: 168 PCMLGVILATGSFEKK--VEEYAYYLGMAEQLENDYL 202


>gi|221132081|ref|XP_002160031.1| PREDICTED: similar to farnesyl diphosphate synthase (farnesyl
           pyrophosphate synthetase, dimethylallyltranstransferase,
           geranyltranstransferase) [Hydra magnipapillata]
          Length = 477

 Score = 35.4 bits (80), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 16  IDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT--- 71
            + I+ +L+   A + Q T+    L  A+ Y    GKK R  +V          ++T   
Sbjct: 147 FENIIKELVEVDAQNPQITEAAHSLRDALSYNAFDGKKSRGMMVICSLDFLKNGNVTNSE 206

Query: 72  ---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
              AL +G  +E +    L+ DD+  MD   IRRGKP  +
Sbjct: 207 VDKALCLGWCVEILQAVFLVADDI--MDRSEIRRGKPCWY 244


>gi|154271672|ref|XP_001536689.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus
           NAm1]
 gi|150409359|gb|EDN04809.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus
           NAm1]
          Length = 375

 Score = 35.4 bits (80), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R   +       +V   +   +   +  +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 79  GKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLVDDVE--DSSTLRRGVPVAHN 136

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A E +   K+    NI  + +L+L    G+       +    +
Sbjct: 137 IFGTAQTINSANYVYFLALEEVQKLKSPNVINIYVKELLNLHRGQGMDVFWRDTLTCPTE 196

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D++++     M+   KTG L   A +    +  A  +           +G+IFQ+ DD L
Sbjct: 197 DDYLE-----MVGN-KTGGLFRLAIK----LMQAESDTGIDCVTLVNLMGLIFQICDDYL 246

Query: 229 D 229
           +
Sbjct: 247 N 247


>gi|310792468|gb|EFQ27995.1| polyprenyl synthetase [Glomerella graminicola M1.001]
          Length = 377

 Score = 35.4 bits (80), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 21/142 (14%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECAS------LFNVNHLTALRVGAAIECIHCYSLIH 89
           NDR   ++    LGGK  R   V +  S      L    +  A  +G   E +  + L+ 
Sbjct: 67  NDR--CSLEINTLGGKCNRGMSVPDSVSYLLGKPLNEEEYFQAATLGWMTELLQAFFLVS 124

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL--- 146
           DD+  MD    RRGKP  +    E   ++A N     AF + ++  T L+   R      
Sbjct: 125 DDI--MDTSITRRGKPCWYRH--EGVGMVAIND----AFMLEAAIYTLLRKFFREHASYV 176

Query: 147 -MLSLTHNIGLQGMLGGQMLDI 167
            +L L H +  Q  L GQ+ D+
Sbjct: 177 DLLELFHEVTFQTEL-GQLCDL 197


>gi|324513413|gb|ADY45511.1| Geranylgeranyl pyrophosphate synthase [Ascaris suum]
          Length = 307

 Score = 35.4 bits (80), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +RS L T       +N      +   +E +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 20  GKHVRSRLATAFNLWLKINDNPLELIMCTVEMLHNASLLIDDIE--DSSILRRGIPVAHS 77

Query: 110 QYDEVTAIIAGN 121
            Y     I  GN
Sbjct: 78  VYGVARTINTGN 89


>gi|254416180|ref|ZP_05029935.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420]
 gi|196177113|gb|EDX72122.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420]
          Length = 452

 Score = 35.4 bits (80), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 18/165 (10%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN-------GLLTYAFEIISSPK 135
           H   LIHDD+   D    RRGK T+H       AI  G+       GLL     ++   K
Sbjct: 172 HNAFLIHDDI--EDESESRRGKGTLHQMIGIPRAINVGDATNVLAVGLLLENLSVLGVSK 229

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                NI  ++      ++  Q M    +        D+    M  K          C  
Sbjct: 230 AL---NILHEIEFMARQSVEGQAMELDWVATNPSHLSDQDYFTMCVKKTCWYSFITPCRI 286

Query: 196 GAIMAHASQNEKERLRC------FGENLGIIFQLADDLLDCEEDL 234
           G I+ H + + ++ +        FG  LGI FQ+ DDLL+ + ++
Sbjct: 287 GLIVGHPASSVQDLIEPLAGLTRFGMILGIAFQIQDDLLNLQGEM 331


>gi|312383692|gb|EFR28678.1| hypothetical protein AND_03051 [Anopheles darlingi]
          Length = 197

 Score = 35.4 bits (80), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  + ++ A+++ A +   E    +G NLG+ FQ  DDLLD
Sbjct: 48  KTASLIANSLKAVAVLSGADEQMAELSFQYGRNLGLAFQFVDDLLD 93


>gi|70995862|ref|XP_752686.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
 gi|42820719|emb|CAF32032.1| geranylgeranyl pyrophosphate synthetase, putative [Aspergillus
           fumigatus]
 gi|66850321|gb|EAL90648.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
 gi|159131440|gb|EDP56553.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus A1163]
          Length = 387

 Score = 35.4 bits (80), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 13/181 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+T       V   +   +   +  +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 90  GKDIRRQLITAFNVWLQVRPESLSIITKVVGMLHTASLLVDDVE--DNSILRRGIPVAHN 147

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-DIQ 168
            +     I + N +   A + +         +I  Q +L+L    G+       +    +
Sbjct: 148 IFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQELLNLHRGQGMDLFWRDTLTCPTE 207

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           ++++D     M+   KTG L   A +    +  A              +G+IFQ+ DD L
Sbjct: 208 EDYLD-----MVGN-KTGGLFRLAIK----LMQAESTTGIDCVSLVNVMGLIFQICDDYL 257

Query: 229 D 229
           +
Sbjct: 258 N 258


>gi|85001640|ref|XP_955531.1| farnesyl pyrophosphate synthetase [Theileria annulata strain
           Ankara]
 gi|65303677|emb|CAI76055.1| farnesyl pyrophosphate synthetase, putative [Theileria annulata]
          Length = 384

 Score = 35.4 bits (80), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 53/232 (22%)

Query: 42  AIRYALLGGKKIRSFLV-------------------TECASLFNVNHLTALRVGAAIECI 82
           A++Y L GGK +R  +V                   T    ++N NHL    V   +E +
Sbjct: 50  AVQYNLQGGKMLRGTMVLSTVKSLCGTNIPENLMTQTLIVGMYNSNHLKQFIVAWCVELL 109

Query: 83  HCYSLIHDDLPSMDNGYIRRGK------PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
               L+ DD+  +D    RR        PT+ +      AI     L T  + I+ +   
Sbjct: 110 QTSFLVADDI--IDKSTKRRSNTCWYLVPTIGVS----NAINDVMFLYTLIYRILFNT-- 161

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ETQVFM-IQKMKTGA 187
            +KD+ +   ++   + + +  +LG Q LDI +   D         T++F  I K KT  
Sbjct: 162 -MKDSKKFLEIIETFNRVSMTTILG-QHLDIYESNSDVLFHDSKEATKLFAEICKNKTSY 219

Query: 188 LMCF------ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              F         SG  +++   ++ E +      +G +FQ  DD LDC  D
Sbjct: 220 YSFFLPLKLGMMLSGVELSNLFYSKVESISIL---IGTLFQAQDDYLDCYGD 268


>gi|115753941|ref|XP_001195950.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115932639|ref|XP_001187762.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 165

 Score = 35.4 bits (80), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 50  GKKIRSFLVTECASLFNV-NHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GK  R  +V   + + N+ N LT        ++    E IH  SL+HDD+  +D    RR
Sbjct: 21  GKSFRPMIVLLMSRVCNLHNSLTESIKDSQKKIAMITEMIHTASLMHDDV--IDAADTRR 78

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           GK +++  + +  +I+AG+ +L+ + + ++
Sbjct: 79  GKTSINELFGQRKSILAGDFVLSISSQALA 108


>gi|289806033|ref|ZP_06536662.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 137

 Score = 35.4 bits (80), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D
Sbjct: 15  IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGD 69


>gi|254367578|ref|ZP_04983601.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica 257]
 gi|134253391|gb|EBA52485.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica 257]
          Length = 203

 Score = 35.0 bits (79), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           Q++   T+ I    +L  Q+L+ ++  + E +   +   KT  L   ACE   +++   Q
Sbjct: 12  QILADATNKISEGEVL--QLLNARNSELSEEEYIKVIYCKTAKLFEAACELAGLISIDKQ 69

Query: 205 NEKE---RLRCFGENLGIIFQLADDLLDCEED 233
           +  +   R++ +G  LG  FQ+ADD+LD   D
Sbjct: 70  DYTKYQGRIKNYGVYLGNAFQIADDVLDYVSD 101


>gi|242820546|ref|XP_002487531.1| serine palmitoyltransferase 1, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218713996|gb|EED13420.1| serine palmitoyltransferase 1, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 639

 Score = 35.0 bits (79), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +NH  ++R GA +         H+++  ++      I +G+P  H  + ++  ++   GL
Sbjct: 312 LNH-ASIRFGARLSGASIRVFSHNNMADLECKLRDAISQGQPRTHRPWKKI--LVTVEGL 368

Query: 124 LTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
            +    +++ P   +LK+  R  L +   H+IG  G  G  + D     ID +++ ++  
Sbjct: 369 YSMEGTMVNLPGIMELKERYRFYLYIDEAHSIGAVGPNGRGVCDYFG--IDPSRIEILMG 426

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
             T +   F    G + A  S  EK R  C G+  G
Sbjct: 427 TFTKS---FGANGGYVAAVKSIIEKLRATCSGQIFG 459


>gi|238878238|gb|EEQ41876.1| serine palmitoyltransferase 2 [Candida albicans WO-1]
          Length = 569

 Score = 35.0 bits (79), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 14/149 (9%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDN---GYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +NH  ++R G  +         H+D+  ++N     I +G+P  H  ++++  I+A  GL
Sbjct: 255 LNH-ASIRFGIRLSGASVKVFKHNDMNDLENLIRNQIAQGQPKTHRPWNKI--IVAVEGL 311

Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQ 181
            +    + + P+  ++KD  +  L +   H+I   G LG +   I D F +D  +V ++ 
Sbjct: 312 YSMEGNMCNLPEIVRIKDKYKCYLFVDEAHSI---GALGPEGRGICDYFSVDPARVDVLM 368

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERL 210
              T +   F    G I    +  EK RL
Sbjct: 369 GTLTKS---FGATGGYIAGDKTLIEKLRL 394


>gi|52081669|ref|YP_080460.1| transcriptional regulator [Bacillus licheniformis ATCC 14580]
 gi|52787054|ref|YP_092883.1| ComQ [Bacillus licheniformis ATCC 14580]
 gi|18266382|gb|AAL67539.1|AF459919_3 ComQ protein [Bacillus licheniformis]
 gi|52004880|gb|AAU24822.1| transcriptional regulator [Bacillus licheniformis ATCC 14580]
 gi|52349556|gb|AAU42190.1| ComQ [Bacillus licheniformis ATCC 14580]
 gi|301752359|gb|ADK89154.1| ComQ [Bacillus licheniformis]
          Length = 289

 Score = 35.0 bits (79), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 20/170 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +GA IE +     I DDL   D+      +P + I  +   A+ A   L T + ++I
Sbjct: 49  AETLGAGIELLILAFDIFDDLEDEDSP----DEPWMKI--NRSVAMNAATALYTISIKVI 102

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
            S     K+ +  + ++  T    LQ M  GQ  D+ +    E +   + K K+GAL   
Sbjct: 103 GSVS---KEPVFFEKLMEYT----LQSM-QGQHDDLSNRPATEDECLDMIKRKSGALTAL 154

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADD----LLDCEEDLPKK 237
            C  GA++A    +    +  +   LGI  Q+ +D      D + D+ KK
Sbjct: 155 PCVLGAMLATGKFD--PTVEKYAYQLGIASQIENDYKALFYDSKSDIAKK 202


>gi|319647582|ref|ZP_08001802.1| ComQ protein [Bacillus sp. BT1B_CT2]
 gi|317390430|gb|EFV71237.1| ComQ protein [Bacillus sp. BT1B_CT2]
          Length = 293

 Score = 35.0 bits (79), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 20/170 (11%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +GA IE +     I DDL   D+      +P + I  +   A+ A   L T + ++I
Sbjct: 49  AETLGAGIELLILAFDIFDDLEDEDSP----DEPWMKI--NRSVAMNAATALYTISIKVI 102

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
            S     K+ +  + ++  T    LQ M  GQ  D+ +    E +   + K K+GAL   
Sbjct: 103 GSVS---KEPVFFEKLMEYT----LQSM-QGQHDDLSNRPATEDECLDMIKRKSGALTAL 154

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADD----LLDCEEDLPKK 237
            C  GA++A    +    +  +   LGI  Q+ +D      D + D+ KK
Sbjct: 155 PCVLGAMLATGKFD--PTVEKYAYQLGIASQIENDYKALFYDSKSDIAKK 202


>gi|66800205|ref|XP_629028.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum
           AX4]
 gi|74850574|sp|Q54BK1|GGPPS_DICDI RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|60462385|gb|EAL60606.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum
           AX4]
          Length = 303

 Score = 35.0 bits (79), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK  R+ L+        V       +   I+ +H  SL+ DD+   DN  +RRGKP  H
Sbjct: 30  SGKGFRNALIKSFDYWLKVGDEKVQDISKVIQGLHGASLLIDDIE--DNSKLRRGKPVAH 87

Query: 109 IQYDEVTAIIAGN 121
             Y     I + N
Sbjct: 88  SIYGIPQTINSAN 100


>gi|170574826|ref|XP_001892983.1| geranylgeranyl pyrophosphate synthetase [Brugia malayi]
 gi|158601230|gb|EDP38192.1| geranylgeranyl pyrophosphate synthetase, putative [Brugia malayi]
          Length = 306

 Score = 35.0 bits (79), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 34/204 (16%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +LL+  +Y L L GK++RS L         V+      +   +E +H  SL+ DD+   D
Sbjct: 7   QLLAPYQYILKLPGKQLRSQLAKAFNFWLQVDVEVLDSIMTVVEMLHNASLMIDDIE--D 64

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA---------FEIISSPKTQLKDNIRSQLM 147
           +  +RRG P  H  Y     I   N +   A         FE +     QL +  R Q  
Sbjct: 65  SSLLRRGLPVTHSIYGIARTINTANYVYFAALSRCILLGKFEAVEIFTEQLLELHRGQ-- 122

Query: 148 LSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
                         G+ L  +D  +   E +   +   KTG L     +   +      +
Sbjct: 123 --------------GKELYWRDIVQCPTEEEYEQMAMQKTGGLFALTVQLMELFGKKQYD 168

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
            K  ++    NL I FQ+ DD ++
Sbjct: 169 FKSLIK----NLAIYFQIRDDYIN 188


>gi|330796722|ref|XP_003286414.1| polyprenyl synthetase [Dictyostelium purpureum]
 gi|325083609|gb|EGC37057.1| polyprenyl synthetase [Dictyostelium purpureum]
          Length = 298

 Score = 35.0 bits (79), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK  R+ L+        V       +   ++ +H  SL+ DD+   DN  +RRGKP  H
Sbjct: 25  SGKGFRNTLIKSFDFWLKVGDERVKDISQVVQGLHVSSLLIDDIE--DNSKLRRGKPVAH 82

Query: 109 IQYDEVTAIIAGN 121
             Y     I + N
Sbjct: 83  SIYGIPQTINSAN 95


>gi|170044368|ref|XP_001849822.1| trans-prenyltransferase [Culex quinquefasciatus]
 gi|167867554|gb|EDS30937.1| trans-prenyltransferase [Culex quinquefasciatus]
          Length = 205

 Score = 35.0 bits (79), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT +L+  + ++ A+++ A +   E    +G NLG+ FQ  DDLLD
Sbjct: 56  KTASLIANSLKAVAVLSGADEQMVELSFQYGRNLGLAFQFVDDLLD 101


>gi|296330769|ref|ZP_06873245.1| ComQ [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305675758|ref|YP_003867430.1| isoprenyl-trasferase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152083|gb|EFG92956.1| ComQ [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305414002|gb|ADM39121.1| isoprenyl-trasferase (ComX modification) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 286

 Score = 34.7 bits (78), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A IE +     I+DDL   DNG        V ++ D   A+ A   L T + +++   
Sbjct: 52  LAAGIELLILSFDIYDDLEDKDNG------NAVWMKIDSSIALNAVTALYTLSIQVMCQA 105

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
             + K    SQ +L    N  LQ  + GQ  DI +    E     + K K+GAL    C 
Sbjct: 106 SHEPK---FSQEIL----NFALQS-IQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCV 157

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            G ++A    +    +  +   LGII Q+ +D
Sbjct: 158 MGVMLATGKYH--PIVASYSYELGIIAQIEND 187


Searching..................................................done


Results from round 2




>gi|254781111|ref|YP_003065524.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040788|gb|ACT57584.1| geranyltranstransferase protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 237

 Score =  337 bits (864), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE
Sbjct: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG
Sbjct: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI
Sbjct: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK
Sbjct: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237


>gi|315122480|ref|YP_004062969.1| geranyltranstransferase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495882|gb|ADR52481.1| geranyltranstransferase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 297

 Score =  277 bits (710), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 167/232 (71%), Positives = 196/232 (84%), Gaps = 4/232 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN  L  KLQENS++I+++L+DLL    SH  +  NDRL SAIRYA+LGGK IRSFLV E
Sbjct: 1   MNDDLLLKLQENSQKIESLLNDLL----SHQSSYLNDRLRSAIRYAILGGKNIRSFLVAE 56

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           CASLF +++ T LRVGAAIEC+HCYSLIHDDLPSMDNGYIRRGKPT+H+QYDE TAI+AG
Sbjct: 57  CASLFGLSNPTVLRVGAAIECVHCYSLIHDDLPSMDNGYIRRGKPTLHLQYDEATAILAG 116

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           N LLTYAFEII SP+TQLKD+IRS+L LSL  N G+QGMLGGQMLDIQ+E +DE Q+  I
Sbjct: 117 NSLLTYAFEIICSPETQLKDSIRSELTLSLARNAGIQGMLGGQMLDIQNECLDEKQLLTI 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           Q+MKTG+LM FACE+GAI+AH +Q EK RLR +GENLGI+FQL DDLLD EE
Sbjct: 177 QEMKTGSLMRFACEAGAIIAHTNQEEKARLRYYGENLGIVFQLVDDLLDFEE 228


>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
          Length = 370

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 127/241 (52%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S + E + R++  LDD        +  +   ++  A+RY+LL GGK++R  L    
Sbjct: 77  FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 129

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 130 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 189

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL +AFE I+     +      + +  L  +IG +G++ GQ++DI  E + +    Q+ 
Sbjct: 190 ALLAFAFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLE 249

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  A   GAI+   S  + E+LR F   +G++FQ+ DD+LD     ++L 
Sbjct: 250 FIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELG 309

Query: 236 K 236
           K
Sbjct: 310 K 310


>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 364

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M     + L E  K ++  LD+ +L        +  +++  A+RY+LL GGK++R  L  
Sbjct: 69  MTFDFKAYLLEKGKSVNQALDNAIL-------IREPEKIHEAMRYSLLAGGKRVRPILCI 121

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             + L   N   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++A
Sbjct: 122 AASELVGGNESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 181

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176
           G+ LL +AFE +++    +  +   + +  L  +IG +G++ GQ++DI    +       
Sbjct: 182 GDALLAFAFEYVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDH 241

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KT AL+  +   GAI+   +  + ERLR F   +G++FQ+ DD+LD     E+
Sbjct: 242 LEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEE 301

Query: 234 LPK 236
           L K
Sbjct: 302 LGK 304


>gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
          Length = 372

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 82/241 (34%), Positives = 127/241 (52%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S + E + R++  LDD        +  +   ++  A+RY+LL GGK++R  L    
Sbjct: 79  FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 131

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 132 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 191

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL +AFE I+     +      + +  L  +IG +G++ GQ++DI  E + +    ++ 
Sbjct: 192 ALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLE 251

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  A   GAI+   S  + E+LR F   +G++FQ+ DD+LD     ++L 
Sbjct: 252 FIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELG 311

Query: 236 K 236
           K
Sbjct: 312 K 312


>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
          Length = 371

 Score =  271 bits (694), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 128/242 (52%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                S + + +  ++  LDD        +      ++  ++RY+LL GGK+IR  L   
Sbjct: 77  TFDFKSYMLQKADSVNKALDD-------SIPLTEPLKIQESMRYSLLAGGKRIRPMLCIA 129

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +  TA+    A+E +H  SL+HDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 130 ACELVGGDESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKVFTEDVAVLAG 189

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + +L ++FE ++S    +      +++  L   +G +G++ GQ++DI  E +DE     +
Sbjct: 190 DAMLAFSFEHVASLTKGVCSERIVRVIYELAKCVGCEGLVAGQVVDICSEGMDEVGLEHL 249

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT AL+  +   GAI+   S  E E+LR F   +G++FQ+ DD+LD     ++L
Sbjct: 250 EFIHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDVTKSSKEL 309

Query: 235 PK 236
            K
Sbjct: 310 GK 311


>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
          Length = 385

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   +  I+  LD         +  +H +++  A+RY+LL GGK++R  L    
Sbjct: 92  FEFKKYMFSKANAINEALDKC-------VSLRHPEKIHEAMRYSLLAGGKRVRPILCIAS 144

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  + +    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 145 CELVGGSEESVMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 204

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVF 178
            LL +AFE I+     ++     +++  L   IG +G++ GQ++D+    +       + 
Sbjct: 205 ALLAFAFEHIACSTKGVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLE 264

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  +   GAI+   S  E ERLR F   +G++FQ+ DD+LD     ++L 
Sbjct: 265 YIHVHKTAALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSSQELG 324

Query: 236 K 236
           K
Sbjct: 325 K 325


>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
          Length = 365

 Score =  268 bits (685), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 81/242 (33%), Positives = 127/242 (52%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                + + E    ++  LD       S +  +  +++  A+RY+LL GGK++R  L   
Sbjct: 71  TFNFKAYMIEKGHSVNQALD-------SAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLA 123

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 124 ACELVGGHESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAG 183

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + LL +AFE I+     +      + +  L  +IG +G++ GQ++DI  E + +    Q+
Sbjct: 184 DALLAFAFEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQL 243

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT AL+  +   GAI+   S  E E+LR F   +G++FQ+ DD+LD     ++L
Sbjct: 244 EFIHVHKTAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQEL 303

Query: 235 PK 236
            K
Sbjct: 304 GK 305


>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
          Length = 372

 Score =  267 bits (684), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 78/240 (32%), Positives = 127/240 (52%), Gaps = 14/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              + + E +  ++  L+  +L        +   ++  ++RY+LL GGK++R  L     
Sbjct: 80  DFKTYMLEKASSVNKALEQAVL-------LKEPLKIHESMRYSLLAGGKRVRPMLCIAAC 132

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L      TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ 
Sbjct: 133 ELVGGLESTAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 192

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179
           LL ++FE ++     +  +   +++  L   IG +G++ GQ++DI  E + E     +  
Sbjct: 193 LLAFSFEHVAKSTKGVSSDRIVRVIGELAKCIGSEGLVAGQVVDISSEGMTEVGLEHLEF 252

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT AL+  +   GAI+  A   + E+LR F   +G++FQ+ DD+LD     ++L K
Sbjct: 253 IHVHKTAALLEASVVLGAIVGGADDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQELGK 312


>gi|225430848|ref|XP_002273789.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 368

 Score =  267 bits (684), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + + +  ++  LDD        +  +   ++  ++RY+LL GGK++R  L    
Sbjct: 75  FNFNAYILDKANSVNKALDD-------AVPIREPVKVHESMRYSLLAGGKRVRPVLCIAA 127

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SL+HDDLP MDN  +RRGKPT H  + E  AI+AG+
Sbjct: 128 CELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGD 187

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL +AFE +++    +      + +  L  +IG +G++ GQ++DI  E + +     + 
Sbjct: 188 ALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLE 247

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  A   GAI+   S  E E+LR F   +G++FQ+ DD+LD     ++L 
Sbjct: 248 YIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELG 307

Query: 236 K 236
           K
Sbjct: 308 K 308


>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
          Length = 368

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/243 (32%), Positives = 128/243 (52%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +     S + + +  I+  L+       + +  +   ++  ++RY+LL GGK++R  L  
Sbjct: 73  LGFDFKSYMVQKASAINQALE-------AAVSLREPLKIHESMRYSLLAGGKRVRPALCL 125

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT HI + E  A++A
Sbjct: 126 AACELVGGDESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLA 185

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
           G+ LL +AFE I+     +      + +  L   IG +G++ GQ++DI  E + E    +
Sbjct: 186 GDALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEK 245

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KT  L+  A   GAIM   +  E E+LR +  ++G++FQ+ DD+LD     ++
Sbjct: 246 LEFIHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQE 305

Query: 234 LPK 236
           L K
Sbjct: 306 LGK 308


>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
           subsp. sativus]
          Length = 367

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 ++ + K+I+  LD+        +  Q    +  A+RY+LL GGK++R  L    
Sbjct: 74  FHFEGYMKTSGKKINKALDE-------AVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIAS 126

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+ +  A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E TAI+AG+
Sbjct: 127 CELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGD 186

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE ++     +      + +  L   +G QG++ GQ++DI ++   +D   +  
Sbjct: 187 ALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEY 246

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT  L+  +   GAI+   +  E ERLR +   +G++FQ+ DD+LD      +L K
Sbjct: 247 IHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGK 306


>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
          Length = 367

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 ++ + K+I+  LD+        +  Q    +  A+RY+LL GGK++R  L    
Sbjct: 74  FHFEGYMKTSGKKINKALDE-------AVPVQKPAIIHEAMRYSLLAGGKRVRPVLCIAS 126

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+ +  A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E TAI+AG+
Sbjct: 127 CELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGD 186

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE ++     +      + +  L   +G QG++ GQ++DI ++   +D   +  
Sbjct: 187 ALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEY 246

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT  L+  +   GAI+   +  E ERLR +   +G++FQ+ DD+LD      +L K
Sbjct: 247 IHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDVTKSSAELGK 306


>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
          Length = 366

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                + + E +  ++  LD+ ++        +    +  A+RY+LL GGK++R  L   
Sbjct: 72  QFNFKTYVAEKAISVNKALDEAVI-------VKDPPVIYEAMRYSLLAGGKRVRPMLCLA 124

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP MDN  IRRGKPT H  Y E  A++AG
Sbjct: 125 ACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAG 184

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           + LL +AFE I++    +  +     +  L  +IG +G++ GQ+ DI    +  +    +
Sbjct: 185 DSLLAFAFEFIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTL 244

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT AL+  +   GAI+   +  E E+LR F   +G++FQ+ DD+LD     E+L
Sbjct: 245 EFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEEL 304

Query: 235 PK 236
            K
Sbjct: 305 GK 306


>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
          Length = 365

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 ++  + +++  LDD +         Q   ++  A+RY+LL GGK++R  L    
Sbjct: 73  FDFEEYMKMKAIKVNKALDDAI-------PMQEPIKIHEAMRYSLLAGGKRVRPILCMAS 125

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +   +   A+    ++E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++ G+
Sbjct: 126 CEVVGGDESLAIPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGD 185

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE ++S    +      Q +  L   +G +G++ GQ++DI  E   +  T++  
Sbjct: 186 ALLSLAFEHVASKTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEY 245

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KTG L+  A   GAI+   ++ E ER+R +   LG++FQ+ DD+LD     E+L K
Sbjct: 246 IHNHKTGKLLEAAVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGK 305


>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 372

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 78/238 (32%), Positives = 127/238 (53%), Gaps = 13/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               +   +K ++  LD+ +         Q+  ++  A+RY+LL GGK++R  L      
Sbjct: 82  FEEYMATKAKHVNKALDEAI-------PLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACE 134

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +  TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TAI+AG+ L
Sbjct: 135 LVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDAL 194

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           L+++FE ++     +  +   + +  L   +G +G++ GQ++DI  E   +  + +  I 
Sbjct: 195 LSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYIH 254

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             KT  L+  +   GAI+  A     ER+R +   +G++FQ+ DD+LD     E+L K
Sbjct: 255 IHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGK 312


>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
 gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
          Length = 365

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   + +++  LD+        +  QH  ++  A+RY+LL GGK++R  L    
Sbjct: 73  FEFKEYMINKANQVNKALDE-------AVPLQHPQKINEAMRYSLLAGGKRVRPILCIAS 125

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++AG+
Sbjct: 126 CELVGGDEGLAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGD 185

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE ++     +  +   Q +  L   +G +G++ GQ++DI  E   +  + +  
Sbjct: 186 ALLSLAFEHVARNTKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEY 245

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT  L+  A   GAIM  A     ERLR +  ++G++FQ+ DD+LD     E+L K
Sbjct: 246 IHVHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSSEELGK 305


>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
          Length = 364

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 120/233 (51%), Gaps = 11/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
             L S + + +  ++  L+       + +  +   ++  A+RY+ L GGK++R  L    
Sbjct: 71  FDLKSYMIQKANSVNQALE-------TAVSLREPLKIHEAMRYSVLAGGKRVRPVLCIAA 123

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDD P MDN  +RRGKPT H  + E  A++AG+
Sbjct: 124 CELVGGEESMAMPAACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAVLAGD 183

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL ++FE ++     +      + +  L  +IG +G++ GQ++DI  E + +     + 
Sbjct: 184 ALLAFSFEHMTGSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGLEHLE 243

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I   KT AL+  +   GAI+   S  E E+LR F   +G++FQ+ DD+LD  
Sbjct: 244 FIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVT 296


>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
 gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
          Length = 307

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L S L+     +D  L+       S +     +++  A+RY+LL GGK++R  L   
Sbjct: 14  SFDLTSYLKHQKDLVDQALE-------SSLPITKPEKIYEAMRYSLLAGGKRLRPILCLA 66

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG
Sbjct: 67  TCDLMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 126

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +GLL+YAFE +++    +      +++  L   +G  G++GGQ+LD++ E    I    +
Sbjct: 127 DGLLSYAFEYVATQTRNVPPEQILEVIARLGRTVGAAGLVGGQVLDLESEGKSDITPETL 186

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTGAL+  +  SGAI+A A++ E E+L  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 187 TFIHTHKTGALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDDILDITATQEEL 246

Query: 235 PK 236
            K
Sbjct: 247 GK 248


>gi|75250205|sp|Q94ID7|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
           Short=GGPP synthase; Short=GGPS; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; Flags: Precursor
 gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
          Length = 370

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    S + +    I+  L+       + +  Q   ++  ++RY+LL GGK++R  L   
Sbjct: 76  SFDFKSYMLQKGNSINQALE-------AAIPLQEPAKIHESMRYSLLAGGKRVRPALCLA 128

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   N   A+    A+E IH  SLIHDDLP MDN  +RRGKPT HI + E  A++AG
Sbjct: 129 ACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 188

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + LL +AFE I+     +      + +  L   IG +G++ GQ++DI  E    +D  ++
Sbjct: 189 DALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKL 248

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  A   GAI+   +  E E+LR +  ++G++FQ+ DD+LD     ++L
Sbjct: 249 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 308

Query: 235 PK 236
            K
Sbjct: 309 GK 310


>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
 gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
          Length = 294

 Score =  264 bits (675), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 11/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L + L+E    ID++L   L       + +   +L  A++Y+L  GGK++R  L     
Sbjct: 2   DLKAYLKERKALIDSVLLTYLPP-----EPEFGKKLYEAVKYSLTVGGKRLRPILCLAGC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   N   AL    AIE IH YSLIHDDLP+MDN  +RRG PT  +++ E TAI+AG+ 
Sbjct: 57  EIVGGNRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           LL  AFE+++  +     N + +++  +    G+ GM+ GQ  D+  E    +   ++  
Sbjct: 117 LLNRAFEVLADWEFDC--NRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLF 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I K KTG L+  +  SG I    S  E + LR +G++LG+ FQ+ DD+LD   D  K
Sbjct: 175 IHKHKTGRLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEK 231


>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
          Length = 366

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 11/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                + + E +  ++  LD+ ++        +    +  A+RY+LL GGK++R  L   
Sbjct: 72  QFNFKTYVAEKAISVNKALDEAVI-------VKDPPVIHEAMRYSLLAGGKRVRPMLCLA 124

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG
Sbjct: 125 ACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAG 184

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           + LL +AFE I++    +  +     +  L  +IG +G++ GQ+ DI    +  +    +
Sbjct: 185 DSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTL 244

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             I   KT AL+  +   GAI+   +  E E+LR F   +G++FQ+ DD+LD  
Sbjct: 245 EFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVT 298


>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
 gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
          Length = 316

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 131/241 (54%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L + L +  + ++  LD       + +   + +++  ++RY+L+ GGK++R  L    
Sbjct: 24  FDLSTYLSQKKELVEAALD-------AAIAVTYPEKIYESMRYSLMAGGKRLRPILCLAT 76

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+
Sbjct: 77  CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 136

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
           GLL+YAFE +++    +      Q++  L   +G  G++GGQ++D+  E    I E  + 
Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLT 196

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KTGAL+      GAI+A A++ + ERL  + +N+G+ FQ+ DD+LD      +L 
Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITVPSSELG 256

Query: 236 K 236
           K
Sbjct: 257 K 257


>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
          Length = 373

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 11/232 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              + +   +K ++  L+  +L        +   R+  ++RY+LL GGK+IR  L     
Sbjct: 81  DFTAYVLGKAKSVNKALEGAVL-------VKEPLRIHESMRYSLLAGGKRIRPMLCIAAC 133

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +  TA+    A+E IH  SL+HDDLP MDN  +RRGKPT H  Y E  A++AG+ 
Sbjct: 134 ELVGGDEETAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDA 193

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFM 179
           LL +AFE I++           +++  L  +IG +G++ GQ++DI  E I       +  
Sbjct: 194 LLAFAFEHIATATKGASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEF 253

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I   KT AL+  +   GAI+   ++ E  +LR F  N+G++FQ+ DD+LD  
Sbjct: 254 IHLHKTAALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVT 305


>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
          Length = 370

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N      +   +  ++  LD         +   H  ++ +A+RY+LL GGK++R  L   
Sbjct: 77  NFPFEEYMVLKANNVNEALD-------KAVPLNHPLKIHAAMRYSLLAGGKRVRPILCIA 129

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TAI+AG
Sbjct: 130 ACELVGGDEAAAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAG 189

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + +L+ AFE I+     +      +++  L   +G +G++ GQ++D+  E   ++   + 
Sbjct: 190 DAMLSLAFEHIARATKNVSPERVVRVITELGSAVGSEGLVAGQIVDVCSEGKEVNVKDLE 249

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT  L+  A   GAI   A     ER+R +   +G++FQ+ DD+LD     E+L 
Sbjct: 250 YIHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYARCIGLLFQVIDDILDVTKSSEELG 309

Query: 236 K 236
           K
Sbjct: 310 K 310


>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
 gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
          Length = 294

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 85/239 (35%), Positives = 132/239 (55%), Gaps = 10/239 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN     +L++ S+++D  LD  +  + +     +   +  A+RY++  GGK++R  LV 
Sbjct: 1   MN--FKEELKQWSQKVDEALDRYIPSSDA-----YPSVIHEAMRYSIFAGGKRLRPILVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                   N    + V  A+E IH YSL+HDDLP+MDN   RRG+PT H  Y E  AI+ 
Sbjct: 54  AATQAVGGNTEKVMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILV 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
           G+ L T AFE+I+      + +  +Q+ L +    G  G++GGQ++DI  ++  ID   +
Sbjct: 114 GDALQTLAFELIAQTTESFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I + KTGAL   +  +GAI+  A+ N+   L  + E +G+ FQ+ DDLLD E D  K
Sbjct: 174 EYIHRHKTGALFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAK 232


>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
 gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
 gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
 gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
          Length = 309

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 90/242 (37%), Positives = 131/242 (54%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L S L++  + ++  LD  L  T         + +  A+RY+LL GGK++R  L   
Sbjct: 16  NFDLASYLKDKQQLVEAALDRSLAIT-------RPETIYEAMRYSLLAGGKRLRPILCLT 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       AL    A+E IH  SLIHDDLP+MDN   RRGK T H +Y E  AI+AG
Sbjct: 69  TCELLGGTLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +GLL YAFE  ++    +  +    ++  L   +G  G++GGQ+LD++ E    I    +
Sbjct: 129 DGLLAYAFEYAATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTGAL+  +  SGAI+A  S  + +RL  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 189 KFIHTHKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEEL 248

Query: 235 PK 236
            K
Sbjct: 249 GK 250


>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 310

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+    + L E  K ++  LD+ +L        +  +++  A+RY+LL GGK++R  L  
Sbjct: 15  MDFDFKAYLLEKGKSVNQALDNAVL-------IREPEKIHEAMRYSLLAGGKRVRPILCI 67

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   N   A+    A+E IH  SL+HDDLP MDN  +RRGKPT H  Y E  A++A
Sbjct: 68  AACELVGGNESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 127

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176
           G+ LL +AFE +++    +  +   + +  L  +IG +G++ GQ++DI    +       
Sbjct: 128 GDALLAFAFEYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDH 187

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KT AL+  +   GAI+   +  + ERLR F   +G++FQ+ DD+LD     E+
Sbjct: 188 LEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEE 247

Query: 234 LPK 236
           L K
Sbjct: 248 LGK 250


>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
           7420]
 gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
           7420]
          Length = 309

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 85/241 (35%), Positives = 130/241 (53%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L + L+E   +++  LD         +   + +++  A+RY+LL GGK++R  L    
Sbjct: 17  FDLSTYLKERKAQVEAALDR-------SLPLGYPEKIYEAMRYSLLAGGKRLRPILCLAT 69

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E +H  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+
Sbjct: 70  CELMGGTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGD 129

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
           GLL YAFE +++    +      Q++  L   +G  G++GGQ++D++ E    I E  + 
Sbjct: 130 GLLAYAFEYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLH 189

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KTGAL+      G I+A A+  + ERL  + +N+G+ FQ+ DD+LD     E+L 
Sbjct: 190 YIHTHKTGALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQEELG 249

Query: 236 K 236
           K
Sbjct: 250 K 250


>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
 gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
          Length = 365

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 128/242 (52%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                S + + +  ++  LD       + +  +   ++  ++RY+LL GGK++R  L   
Sbjct: 71  TFDFKSYMLQKANSVNKALD-------AAVSLKEPAKIHESMRYSLLAGGKRVRPVLCLA 123

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   AL    A+E IH  SL+HDDLP MDN  +RRGKPT HI + E  A++AG
Sbjct: 124 ACDLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 183

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + LL++AFE I+     +      + +  L   IG +G++ GQ++DI  E + E    Q+
Sbjct: 184 DALLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQL 243

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  A   GAI+   +  E E+LR +  ++G++FQ+ DD+LD     ++L
Sbjct: 244 EFIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTKSSQEL 303

Query: 235 PK 236
            K
Sbjct: 304 GK 305


>gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
          Length = 365

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 73/232 (31%), Positives = 123/232 (53%), Gaps = 10/232 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   + +++  LD+ +         Q   ++  A+RY+LL GGK++R  L    
Sbjct: 73  FEFQEYMVTKAIKVNKALDEAI-------PMQEPIKVHEAMRYSLLAGGKRVRPILCMAS 125

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +   +   A+    A+E IH  SL+HDDLP MDN  +RRGKPT H  + E TA++AG+
Sbjct: 126 CEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLAGD 185

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE +++    +      Q +  L   +G +G++ GQ++D+  E   +  T++  
Sbjct: 186 ALLSLAFEHVATKTQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEY 245

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I   KT  L+  A   GAIM   ++ + ER+R +   +G++FQ+ DD+LD  
Sbjct: 246 IHHHKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVT 297


>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
          Length = 365

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 73/232 (31%), Positives = 124/232 (53%), Gaps = 10/232 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   + +++  LD+ +         Q   ++  A+RY+LL GGK++R  L    
Sbjct: 73  FEFQEYMVTKAIKVNKALDEAI-------PMQEPIKVHEAMRYSLLAGGKRVRPILCMAS 125

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +   +   A+    A+E IH  SL+HDDLP MDN  +RRGKPT H  + E TA++AG+
Sbjct: 126 CEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGD 185

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE +++    +      Q +  L   +G +G++ GQ++D+  E   +  T++  
Sbjct: 186 ALLSLAFEHVATKTQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEY 245

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I + KT  L+  A   GAIM   ++ + ER+R +   +G++FQ+ DD+LD  
Sbjct: 246 IHQHKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVT 297


>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
          Length = 373

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                + + + +  ++  LD       + +  +   ++  A+RY+LL GGK++R  L   
Sbjct: 79  TFNFKTYMLQKANSVNQALD-------AAVSLKDPRKIHEAMRYSLLAGGKRVRPMLCIA 131

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+    ++E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 132 ACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 191

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + LL ++FE I+     +      + +  L  +IG +G++ GQ++DI  E + +     +
Sbjct: 192 DALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHL 251

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT AL+  A   GAI+   S  E E+LR F   +G++FQ+ DD+LD     ++L
Sbjct: 252 EFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQEL 311

Query: 235 PK 236
            K
Sbjct: 312 GK 313


>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
 gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
          Length = 366

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 126/242 (52%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                S + + +  ++  LD       + +  +   ++  ++RY+LL GGK++R  L   
Sbjct: 72  TFDFKSYMIQKANSVNKALD-------TAVTLKEPAKIHESMRYSLLAGGKRVRPVLCLA 124

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP MDN  +RRGK T HI + E  A++AG
Sbjct: 125 ACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAG 184

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + LL +AFE I+     +      + +  L   IG +G++ GQ++DI  E + E    Q+
Sbjct: 185 DALLAFAFEHIAVSTLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQL 244

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  A   GAI+   +  E E+LR +  ++G++FQ+ DD+LD     ++L
Sbjct: 245 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQEL 304

Query: 235 PK 236
            K
Sbjct: 305 GK 306


>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
          Length = 356

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                + +      +   LD+ ++        ++   +  A+RY+LL GGK++R  L   
Sbjct: 61  TFNFNAYMLGKGNSVHKALDESIM-------IKNPPTIHEAMRYSLLAGGKRVRPILCIA 113

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TA+    A+E IH  SLIHDDLP MDN   RRGKPT H  Y E  A++AG
Sbjct: 114 ACELVGGEEATAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAG 173

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQV 177
           + LL +AFE +SS             +  L  +IG +G++ GQ++DI     + I   Q+
Sbjct: 174 DSLLAFAFEYVSSRTEGASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQL 233

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT AL+  +   GAI+   S  + E+LR F   +G++FQ+ DD+LD     E+L
Sbjct: 234 EFIHIHKTAALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEEL 293

Query: 235 PK 236
            K
Sbjct: 294 GK 295


>gi|121145|sp|P80042|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
           Short=GGPP synthase; Short=GGPS; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; Flags: Precursor
 gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
          Length = 369

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 81/241 (33%), Positives = 125/241 (51%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 + E +  ++  LD+ ++    H+       +  A+RY+LL GGK++R  L    
Sbjct: 76  FNFKIYVTEKAISVNKALDEAIIVKEPHV-------IHEAMRYSLLAGGKRVRPMLCLAA 128

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   N   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+
Sbjct: 129 CELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGD 188

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178
            LL +AFE I +    +  +     +  L  +IG +G++ GQ+ DI+   +  +    + 
Sbjct: 189 SLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLE 248

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  +   GAI+   +  E E+LR F   +G++FQ+ DD+LD     E+L 
Sbjct: 249 FIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELG 308

Query: 236 K 236
           K
Sbjct: 309 K 309


>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
          Length = 308

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + + +  ++  LDD        +  +   ++  ++RY+LL GGK++R  L    
Sbjct: 15  FNFNAYILDKANSVNKALDD-------AVPIREPVKVHESMRYSLLAGGKRVRPVLCIAA 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SL+HDDLP MDN  +RRGKPT H  + E  AI+AG+
Sbjct: 68  CELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL +AFE +++    +      + +  L  +IG +G++ GQ++DI  E + +     + 
Sbjct: 128 ALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLE 187

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  A   GAI+   S  E E+LR F   +G++FQ+ DD+LD     ++L 
Sbjct: 188 YIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELG 247

Query: 236 K 236
           K
Sbjct: 248 K 248


>gi|15234534|ref|NP_195399.1| GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|13432144|sp|P34802|GGPP1_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 1,
           chloroplastic; Short=GGPP synthase 1; Short=GGPS1;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 1;
           AltName: Full=Dimethylallyltranstransferase 1; AltName:
           Full=Farnesyl diphosphate synthase 1; AltName:
           Full=Farnesyltranstransferase 1; AltName:
           Full=Geranyltranstransferase 1; Flags: Precursor
 gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
          Length = 371

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 15/238 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    S +   ++ ++  LD       S +  +   ++  A+RY+LL GGK++R  L   
Sbjct: 73  SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 125

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 126 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185

Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
           + LL++AFE ++S  +   +      + +  L   IG +G++ GQ++DI  E +D     
Sbjct: 186 DALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              +  I   KT AL+  +   GAI+   S +E ERLR F   +G++FQ+ DD+LD  
Sbjct: 246 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 303


>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 297

 Score =  260 bits (666), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L + L +  ++++  L   L+         + +R+  A+RY+LL GGK++R  L   
Sbjct: 5   TFNLKAYLSQRQQQVEEALSAALV-------PAYPERIYEAMRYSLLAGGKRLRPILCLA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       AL    A+E IH  SLIHDDLP+MDN   RRGKPT H  + E  AI+AG
Sbjct: 58  ACELAGGTVEQALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + LL +AFE I+S    +   +  Q++  + H +   G++GGQ++D++ E   I    + 
Sbjct: 118 DALLAFAFEHIASQTQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLE 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KTGAL+  +  SG I+A   +     L  +  ++G+ FQ+ DD+LD   
Sbjct: 178 YIHSHKTGALLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITA 231


>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 379

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 15/238 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    S +   ++ ++  LD       S +  +   ++  A+RY+LL GGK++R  L   
Sbjct: 81  SFDFMSYIITKAESVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 133

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 134 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 193

Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
           + LL++AFE ++S  +   +      + +  L   IG +G++ GQ++DI  E +D     
Sbjct: 194 DALLSFAFEHLASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 253

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              +  I   KT AL+  +   GAI+   S +E ERLR F   +G++FQ+ DD+LD  
Sbjct: 254 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 311


>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
          Length = 369

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                S + + +  ++  LD  +L        +    +  A+RY+LL GGK++R  L   
Sbjct: 75  TFNFKSYMVQKANSVNQALDAAVL-------LREPQMIHEAMRYSLLAGGKRVRPVLCLS 127

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 128 ACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 187

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + LL YAFE ++     +      + +  L  +IG +G++ GQ++DI  E    +   Q+
Sbjct: 188 DALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQL 247

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT AL+  +   GAI+   +  + E LR F   +G++FQ  DD+LD     ++L
Sbjct: 248 EFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQEL 307

Query: 235 PK 236
            K
Sbjct: 308 GK 309


>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
 gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
          Length = 307

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 132/241 (54%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L + L++    +D  L+         +     +++  A+RY+LL GGK++R  L    
Sbjct: 15  FDLKAYLKQQKDLVDQALE-------GSLPITKPEKIYEAMRYSLLAGGKRLRPILCLAT 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+
Sbjct: 68  CELMGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
           GLL+YAFE +++    +  N   Q++  L   +G  G++GGQ+LD++ E    I    + 
Sbjct: 128 GLLSYAFEFVATQTRNVPPNQVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDITAETLT 187

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KTGAL+  +  SGAI+A A+  ++ RL  + +N+G+ FQ+ DD+LD     E+L 
Sbjct: 188 FIHTHKTGALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDITSTQEELG 247

Query: 236 K 236
           K
Sbjct: 248 K 248


>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
          Length = 351

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 11/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                  + E +  ++  L+       S +  +   ++  ++RY+LL GGK++R  L   
Sbjct: 57  TFDFKKYMLEKASSVNKALE-------SAVSLKEPLKIHESMRYSLLAGGKRVRPMLCLA 109

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +  TA+    +IE IH  SL+HDDLP MDN ++RRG PT HI + E  A++AG
Sbjct: 110 ACELVGGHPSTAMPAACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIVFGEDVAVLAG 169

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + LL Y+FE +++    +      +++  L   I  +G+L GQ++DI  E + E     +
Sbjct: 170 DALLAYSFEYLATATEGVLPERIVRVIAELAKCIRSEGLLAGQVVDICSEGVSEIGLEHL 229

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             I   KT AL+  +   GAI+   +  E ERLR F   +G++FQ+ DD+LD  
Sbjct: 230 EYIHLHKTAALLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVT 283


>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
           subsp. sativus]
          Length = 365

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 127/234 (54%), Gaps = 11/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                S + E +  ++  LD       + +  Q   ++  ++RY+LL GGK++R  L   
Sbjct: 71  TFDFKSYMLEKAISVNKALD-------ASVSLQEPVKIHESMRYSLLAGGKRVRPILSIA 123

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              LF  +   A+    A+E IH  SL+HDDLP MDN  +RRGKPT H  Y E  A++AG
Sbjct: 124 ACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAG 183

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + +L  AF ++++  + +  +   ++++ L   IG +G++ GQ++D+  E    +    +
Sbjct: 184 DAMLALAFHLVATETSGVSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLKDL 243

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             I + KT AL+  +   GAI+  A+  E E++R +   +G++FQ+ DD+LD  
Sbjct: 244 EFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVT 297


>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
          Length = 361

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S + E +  ++  LD         +  +   ++  ++RY+LL GGK++R  L    
Sbjct: 69  FDFKSYMLEKANLVNQALD-------LAVPLKDPIKIHESMRYSLLAGGKRVRPVLCIAA 121

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   + LTA+    A+E IH  SL+HDDLP MDN   RRGKPT H+ Y E  A++ G+
Sbjct: 122 CELVGGDGLTAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGD 181

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
            +L++AFE +++    +  +   + +  L   IG +G++ GQ++DI  E  D     +  
Sbjct: 182 AMLSFAFEHMATATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEF 241

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT AL+  +   GAI+   S  E E+LR F  ++G++FQ+ DD+LD     E+L K
Sbjct: 242 IHLHKTAALLEGSVVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGK 301


>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
 gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
          Length = 297

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 81/234 (34%), Positives = 126/234 (53%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L + L +  ++++  L   L+         + +R+  A+RY+LL GGK++R  L   
Sbjct: 5   TFNLDTYLSQRQQQVEEALSAALV-------PAYPERIYEAMRYSLLAGGKRLRPILCLA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP+MDN   RRGKPT H  + E  AI+AG
Sbjct: 58  ACELAGGSVEQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + LL YAFE I+S    +   +  Q++  + H +   G++GGQ++D++ E   I    + 
Sbjct: 118 DALLAYAFEHIASQTRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLE 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KTGAL+  +  SG I+A A +    RL  +  ++G+ FQ+ DD+LD   
Sbjct: 178 YIHSHKTGALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTA 231


>gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
           NIES-39]
          Length = 316

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 80/234 (34%), Positives = 128/234 (54%), Gaps = 11/234 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L + L +  + ++  LD       + +   + +++  ++RY+L+ GGK++R  L    
Sbjct: 24  FDLSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLAT 76

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y +  AI+AG+
Sbjct: 77  CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGD 136

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVF 178
           GLL+YAFE +++    +      Q++  L   +G  G++GGQ++DI  E +    E  + 
Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLT 196

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KTGAL+      GAI+A A++ + ERL  + +N+G+ FQ+ DD+LD   
Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITA 250


>gi|225458370|ref|XP_002283364.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 371

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 + + +  +   LD+ +         +   ++  A+RY+LL GGK++R  L    
Sbjct: 78  FSFKDYMIQKASSVHKALDEAVY-------VKSPIKIHEAMRYSLLAGGKRVRPALCLAA 130

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 131 CELVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 190

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            LL +AFE +++  + +  +     +  L  +IG +G++ GQ++DI       +   Q+ 
Sbjct: 191 SLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLE 250

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  A   GA++   S  E E+LR +   +G++FQ+ DD+LD     ++L 
Sbjct: 251 FIHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKSSQELG 310

Query: 236 K 236
           K
Sbjct: 311 K 311


>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
          Length = 359

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N    + ++E ++R++  LD  + Q       +    +  ++RY+LL GGK++R  L   
Sbjct: 65  NFDFEAYMKEKAERVNRALDAAVAQ-------REPRWIHESMRYSLLAGGKRVRPLLCIA 117

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +  TA+    A E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG
Sbjct: 118 SCELVGGDERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAG 177

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + LL  AFE +++    +      + ++     IG +G++GGQ++DI  E + E    Q+
Sbjct: 178 DALLALAFEHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQL 237

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT AL+  A   GAI+  A     E+LR F   +G++FQ+ DD+LD     E+L
Sbjct: 238 EYIHLHKTAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDVTKSSEEL 297

Query: 235 PK 236
            K
Sbjct: 298 GK 299


>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 312

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 16/242 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              + ++  +  I+  LD       + +   + +RL  ++RY+LL GGK+IR  L     
Sbjct: 18  EFNAYIKNVNAEIERALD-------ASVPMHYPERLSESMRYSLLAGGKRIRPALCLAAC 70

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L       A+    A+E IH  SLIHDDLPSMDN   RRGKPT H  Y E  AI+AG+ 
Sbjct: 71  ELVGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 130

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----TQV 177
           LL++AFE I      +  +   ++++ +   +G +G++GGQ++DI  E  DE       +
Sbjct: 131 LLSHAFEYIGRETKGVSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTL 190

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTGAL+  +  +GAI+  AS+ +  +L  + +N+G+ FQ+ DD+LDC    E+L
Sbjct: 191 KYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTATSEEL 250

Query: 235 PK 236
            K
Sbjct: 251 GK 252


>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
 gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
          Length = 310

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 12/236 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L + L+E  K  D  LD  +          + +++  A+RY+LL GGK++R  L   
Sbjct: 16  TFNLVAYLKERQKLCDNALDRAI-------PIIYPEKIYEAMRYSLLAGGKRVRPILCLA 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG
Sbjct: 69  TCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAG 128

Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           +GLL  AFE+++      +   +  Q+++ L   +G  G++GGQ++D++ E    I    
Sbjct: 129 DGLLALAFELVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLET 188

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I + KT AL+     SG I+A AS  + +RL  + EN+G+ FQ+ DD+LD   
Sbjct: 189 LNFIHRHKTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITS 244


>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
          Length = 364

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + E +  ++  LDD +         ++   +  A+RY+LL GGK++R  L    
Sbjct: 71  FNFNAYVVEKANHVNKALDDAVA-------VRNPPMIHDAMRYSLLAGGKRVRPMLCIAA 123

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +       A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 124 CEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 183

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178
            LL +AFE +++  T +        +  L   IG +G++ GQ++D+    D  +    + 
Sbjct: 184 ALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLE 243

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  +   GAI+   S ++ E+LR F   +G++FQ+ DD+LD     E+L 
Sbjct: 244 FIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVTKSSEELG 303

Query: 236 K 236
           K
Sbjct: 304 K 304


>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
 gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
          Length = 297

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 116/236 (49%), Gaps = 8/236 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
              L S L E  + +   L   L          +   +  A+ Y+L  GGK++R  LV  
Sbjct: 3   TTELESYLAERRQLVQEALARNLPP-----PDTYPPAVHQAMHYSLFAGGKRLRPILVLA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                       L    A+E IH YSLIHDDLP+MDN   RRG+PT H  Y E  A++AG
Sbjct: 58  AGEAVGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDYRRGRPTCHKVYGEAIALLAG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + LLT AFE++S     +      +    L  + G QG++GGQ++D++ E   +   +V 
Sbjct: 118 DALLTLAFEVLSRIPATIPPERILRATRELAASAGSQGLIGGQVVDMEAEGQPVTLEKVN 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            I   KTG+L+      G I+  A + +   L  +GE LG+ FQ+ DD+LD   D 
Sbjct: 178 YIHNHKTGSLIRACLRLGGILGGAGEEQLALLTRYGEALGLAFQITDDILDITGDF 233


>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
          Length = 345

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S + + +  ++  LDD        +  +   ++  ++RY+LL GGK++R  L    
Sbjct: 53  FDFKSYMVQKANTVNQALDD-------AVPIREPKKIHESMRYSLLAGGKRVRPILCLAS 105

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   + ++A+    A+E IH  SL+HDDLP MDN   RRGKPT HI Y E  A++AG+
Sbjct: 106 CELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHIVYGEEIAVLAGD 165

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
            LL++AFE +++    +      + +  L   IG +G++ GQ++DI  E  D     +  
Sbjct: 166 ALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEF 225

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT AL+  +   GAIM   S  E ERLR F  ++G++FQ+ DD+LD     E+L K
Sbjct: 226 IHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSIGLLFQVVDDILDVTKSSEELGK 285


>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 370

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    S + + +  I+  L+       + +  Q   ++  ++RY+LL GGK++R  L   
Sbjct: 76  SFDFKSYMLQKANSINQALE-------AAIPLQEPAKIHESMRYSLLAGGKRVRPALCLA 128

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   N   A+    A+  IH  SLIHDDLP MDN  +RRGKPT HI + E  A++AG
Sbjct: 129 ACELVGGNDSMAMPAACAVGMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 188

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + LL +AFE I+     +      + +  L   IG +G++ GQ++DI  E    +D  ++
Sbjct: 189 DALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKL 248

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  A   GAI+   +  E E+LR +   +G++FQ+ DD+LD     ++L
Sbjct: 249 EFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILDVTKSSQEL 308

Query: 235 PK 236
            K
Sbjct: 309 GK 310


>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
           thermopropionicum SI]
 gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
           thermopropionicum SI]
          Length = 294

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 85/239 (35%), Positives = 131/239 (54%), Gaps = 11/239 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           MN     +L++ +  ++  L+  L          +   +  A+RY++LGG K++R  LV 
Sbjct: 2   MN--FKEELKKKAALVEEALERYLPP-----PDAYPPLIHHAMRYSVLGGGKRLRPALVM 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     N    L    A+E IH YSL+HDDLP+MDN   RRG+ T H  Y E  AI+A
Sbjct: 55  AGAEAVGGNAADVLPAACAVELIHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAAAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT AFE++++      +NI  +++       G  G++GGQ++D       IDE+ +
Sbjct: 115 GDALLTLAFELLANNDRARPENI-VRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I + KTGAL  F+  +GA++A A + +   L  + E+LG+ FQ+ DD+LD E D  K
Sbjct: 174 EYIHRHKTGALYRFSVRAGAMLAGAQEEQLASLTAYAEHLGLAFQIKDDILDVEGDEKK 232


>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 294

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 128/232 (55%), Gaps = 8/232 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L+  +  +D  L++ L          +   +  A+RY++  GGK++R  L    A    
Sbjct: 6   QLKSYALAVDKALNEYLPAAE-----VYPSTIHEAMRYSVFAGGKRLRPILTIAAAEAVG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    + V  A+E IH YSL+HDDLP+MDN   RRG+PT H  Y E  AI+ G+ LLT 
Sbjct: 61  GSMEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQ 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           AFE+I+    ++  +  +Q+ L +    G  G++GGQ++D   +D+ ID   +  I + K
Sbjct: 121 AFEVIAGTAVKVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           TGAL   A  +GAI++ AS  E   L  + E +G+ FQ+ DDLLD E D  K
Sbjct: 181 TGALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAK 232


>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
 gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
          Length = 316

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L + L E    ++  LD+        ++  + +++  A+RY+LL GGK++R  L   
Sbjct: 23  TFDLSNYLVERKALVEKALDN-------SIKIVYPEKIYEAMRYSLLAGGKRLRPILCLA 75

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   N   A+    A+E IH  SLIHDDLPSMDN   RRG+ T H  Y E  AI+AG
Sbjct: 76  TCELSGGNIEMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIAILAG 135

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQV 177
           +GLL+YAFE + +    +      Q++  L    G  G++GGQ++D+  E I    E  +
Sbjct: 136 DGLLSYAFEFVVTQTKNVLPKQVLQVIARLGKASGAAGLVGGQVVDLASEGISQVSEKTL 195

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
             I   KTGAL+  +   GAI+A  SQ    RL  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 196 HFIHTHKTGALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDITATTEEL 255

Query: 235 PK 236
            K
Sbjct: 256 GK 257


>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
           6301]
 gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
 gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
           6301]
 gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
          Length = 301

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 89/243 (36%), Positives = 138/243 (56%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           +   L S L+E  ++++  L+ +L         Q    +  ++RY+LL  GK++R  L  
Sbjct: 7   LRFDLKSYLKERQRQVEAALNAIL-------PPQDPPLIYESMRYSLLAEGKRLRPILCL 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L       AL    A+E +H  SLIHDDLPSMDN   RRG+PT H  Y E  AI+A
Sbjct: 60  ASCELAGGTAAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILA 119

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
           G+ LLTYAFE I+    ++  +   +++ +L   +G +G++GGQ++D+Q E  D+     
Sbjct: 120 GDALLTYAFEAIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLET 179

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KTGAL+  +  SGAI+A AS+  +E+LR + + +G+ FQ+ DD+LD     E+
Sbjct: 180 LHYIHTHKTGALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAEE 239

Query: 234 LPK 236
           L K
Sbjct: 240 LGK 242


>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
          Length = 369

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 11/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S + + +  ++  L+       S +  +   ++  A+RY+LL GGK++R  L    
Sbjct: 76  FDFQSYMDQMADSVNQALE-------SAVSLREPLKIHEAMRYSLLAGGKRVRPLLCIAA 128

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 129 CELVGGDVSVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDIAVLAGD 188

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL++AFE ++        +   + +  L   +G +G++ GQ++DI  E +++     + 
Sbjct: 189 ALLSFAFEHVAVSTVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLNDVGLDHLE 248

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I   KT  L+  A   GAI+   +  E ERLR F   +G++FQ+ DD+LD  
Sbjct: 249 YIHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVT 301


>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L]
 gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Lyngbya majuscula 3L]
          Length = 309

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/240 (36%), Positives = 128/240 (53%), Gaps = 14/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L + L+E    I++ LD  L +          D++  A+RY+LL GGK++R  L     
Sbjct: 18  DLLTYLKERKALIESALDQALPRME-------PDKIYEAMRYSLLAGGKRLRPILCLATC 70

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  + E  AI+AG+G
Sbjct: 71  ELMGGTVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDG 130

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           LL YAFE  ++    +      Q++  L   +G  G++GGQ+LD++ E    I E  +  
Sbjct: 131 LLAYAFEYAAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSF 190

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KTGAL+      G I+A A+    +RL  + +N+G+ FQ+ DD+LD     E+L K
Sbjct: 191 IHTHKTGALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILDITATQEELGK 250


>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
          Length = 366

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 12/235 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                S + E +  ++  LD       + +  Q   ++  ++RY+LL GGK++R  L   
Sbjct: 71  TFDFKSYMLEKAISVNKALD-------ASVSLQEPVKIHESMRYSLLAGGKRVRPLLSIA 123

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              LF  +   A+    A+E IH  SL+HDDLP MDN  +RRGKPT H  Y E  A++AG
Sbjct: 124 ACELFGGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAG 183

Query: 121 NGLLTY-AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           + +L   AF ++++    +  +   ++++ L   IG +G++ GQ++D+  E    +    
Sbjct: 184 DAMLALAAFHLVATETRGVSSDQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLED 243

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +  I + KT AL+  +   GAI+  A+  E E++R +   +G++FQ+ DD+LD  
Sbjct: 244 LEFIHRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVT 298


>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
           nagariensis]
 gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
           nagariensis]
          Length = 312

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 82/234 (35%), Positives = 127/234 (54%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +      + + +K ++  LD+ + Q       ++ D L  ++RY+LL GGK++R  L   
Sbjct: 19  SFDFNQYMVDRAKLVNKALDEAVPQ-------KYPDTLYESMRYSLLAGGKRVRPALCLA 71

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   AL    A+E IH  SLIHDDLPSMDN   RRG+PT H  Y E  AI++G
Sbjct: 72  ACELIGGDVQAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSG 131

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + LLTYAFE I+     +      ++++ L    G +G++ GQ++DIQ E   +    + 
Sbjct: 132 DALLTYAFEHIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLK 191

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KT AL+  +   GAI+  A +   E+LR +  N+G+ FQ+ DD+LD  +
Sbjct: 192 YIHLHKTAALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQ 245


>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
           MBIC11017]
 gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
           MBIC11017]
          Length = 301

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 84/239 (35%), Positives = 129/239 (53%), Gaps = 11/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L   L +  + ++  LD       + +   + +++  A+RY+LL GGK++R  L   
Sbjct: 8   NFNLVDYLSQRRELVEAALD-------ASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLA 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+    A+E IH  SLIHDDLP+MDN   RRGKPT H +Y E  AI+AG
Sbjct: 61  ACELAGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +GLL YA+E ++    Q+      +++  L H +   G++GGQ++D++ E    +  + +
Sbjct: 121 DGLLAYAYEHVAIETQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTL 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I   KTGAL+  +  SGA +A ASQ+   R   F  N+G+ FQ+ DD+LD      K
Sbjct: 181 NFIHAHKTGALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEK 239


>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
 gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
          Length = 345

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 16/242 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              + ++  + +I+  LD       + +   + +RL  ++RY+LL GGK+IR  L     
Sbjct: 51  EFNAYIKGVNAKIERALD-------ASVPVHYPERLSESMRYSLLAGGKRIRPALCLAAC 103

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +  TA+    A+E IH  SLIHDDLPSMDN   RRGKPT H  Y E  AI+AG+ 
Sbjct: 104 ELVGGDMETAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 163

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQV 177
           LL++AFE I             ++++ +   +G +G++GGQ++DI  E      +    +
Sbjct: 164 LLSHAFEYIGRETKGASAEKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTL 223

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTGAL+  +  +GAI+  AS+ +  +L  + +N+G+ FQ+ DD+LDC    E+L
Sbjct: 224 KYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTASSEEL 283

Query: 235 PK 236
            K
Sbjct: 284 GK 285


>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
 gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
          Length = 295

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 131/240 (54%), Gaps = 12/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   L++  + +D  L+  L         +    L  ++RY++  GGK++R  L+    
Sbjct: 2   DLKQYLKQKCELVDQALERFLPH-----GKELPASLHGSMRYSVFAGGKRVRPVLLLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                   +AL    A+E IH YSLIHDDLP+MDN   RRG PT H  Y E TAI+AG+ 
Sbjct: 57  EAVGGELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           LLT AF ++S     ++   R +++  + H  G +GM+GGQM+D++ E    ID   +  
Sbjct: 117 LLTEAFILLSCNGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I   KTGAL+  +  +GAI+  A++   + L  + + +G+ FQ+ADD+LD E    +L K
Sbjct: 177 IHTHKTGALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGK 236


>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
 gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
          Length = 309

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L S L+E  + ++  LD         +     +++  A+RY+LL GGK++R  L   
Sbjct: 16  NFELASYLKEKKQLVEAALDQ-------SLHITRPEKIYEAMRYSLLAGGKRLRPILCLT 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       +L    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG
Sbjct: 69  TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + LL+YAFE +++    +       ++  L   +G  G++GGQ+LD++ E   +     +
Sbjct: 129 DALLSYAFEYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTGAL+  +  SGAI+A A   + ERL  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEEL 248

Query: 235 PK 236
            K
Sbjct: 249 GK 250


>gi|13431547|sp|Q43133|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
           chloroplastic/chromoplastic; Short=GGPP synthase;
           Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; Flags: Precursor
 gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
          Length = 366

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/244 (33%), Positives = 126/244 (51%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +   +  ++  LD       S +  +   ++  A+RY+LL GGK++R  L    
Sbjct: 70  FDFMSYIIRKADSVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAA 122

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+
Sbjct: 123 CELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGD 182

Query: 122 GLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL++AFE ++S   +++      + +  L   IG +G++ GQ++DI  E +D       
Sbjct: 183 ALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLE 242

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KT AL+  +   G I+   S  E ERLR F   +G++FQ+ DD+LD     +
Sbjct: 243 HLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQ 302

Query: 233 DLPK 236
           +L K
Sbjct: 303 ELGK 306


>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
 gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
          Length = 309

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 130/242 (53%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L S L+E  + ++  LD         +     +++  A+RY+LL GGK++R  L   
Sbjct: 16  DFDLASYLKEKKQLVEAALDQ-------SLPITRPEKIYEAMRYSLLAGGKRLRPILCLT 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       +L    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG
Sbjct: 69  TCELMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + LL+YAFE +++    +       ++  L   +G  G++GGQ+LD++ E    +    +
Sbjct: 129 DALLSYAFEYVATQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
             I   KTGAL+  +  SGAI+A A   + ERL  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDVTASTEEL 248

Query: 235 PK 236
            K
Sbjct: 249 GK 250


>gi|13431546|sp|Q42698|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
           Short=GGPP synthase; Short=GGPS; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; Flags: Precursor
 gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
          Length = 357

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 76/240 (31%), Positives = 126/240 (52%), Gaps = 14/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              + +   +  ++  L+D +L        +   ++  ++RY+LL GGK++R  L     
Sbjct: 65  DFKAYMIGKANSVNKALEDAVL-------VREPLKIHESMRYSLLAGGKRVRPMLCIAAC 117

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF      A+    A+E IH  SL+HDDLP MDN  +RRGKPT H  + E  A++AG+ 
Sbjct: 118 ELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDA 177

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFM 179
           LL +AFE I++    +      +++  L   IG +G++ GQ++D+  E I       +  
Sbjct: 178 LLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEF 237

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT AL+  +   GAI+  A+  +  +LR F   +G++FQ+ DD+LD     ++L K
Sbjct: 238 IHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGK 297


>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
          Length = 383

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 12/234 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L+  +  ++  LD         +  ++ +R+  A+RY+LL GGK++R  L    
Sbjct: 89  FDFKEYLRSKAMAVNEALDR-------AVPLRYPERIHEAMRYSLLAGGKRVRPVLCISA 141

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP MDN   RRGKPT H  + E TAI+AG+
Sbjct: 142 CELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAILAGD 201

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
            LL++AFE I+ S    +  +   +++  L   IG QG++GGQ+ DI  E    +D   +
Sbjct: 202 ALLSFAFEHIAVSTSKSVGTDRILRVVSELGRTIGSQGLVGGQVADITSEGDASVDLDTL 261

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             I   KT  L+  +   GAI++ AS NE ER++ +  ++G++FQ+ DD+LD  
Sbjct: 262 EWIHIHKTAVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDVT 315


>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
 gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
          Length = 320

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L S L+E  + +D  L+         +   + +++  A+RY+L+ GGK++R  L    
Sbjct: 28  FDLVSYLKERQQWVDAALEQ-------SISVTYPEKIYQAMRYSLMAGGKRLRPILCLAT 80

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+
Sbjct: 81  CEMTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGD 140

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
           GLL YAFE ++     +      +++  L H +   G++GGQ++D++ E    +    + 
Sbjct: 141 GLLAYAFEYVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLN 200

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KTGAL+  +   GA +  AS    ++L  +  N+G+ FQ+ DD+LD     E+L 
Sbjct: 201 FIHAHKTGALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELG 260

Query: 236 K 236
           K
Sbjct: 261 K 261


>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
 gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
 gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
          Length = 391

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 15/242 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   +  ++  LD         + T + +++  ++RY+LL GGK++R  L    
Sbjct: 97  FDFKKYMYSKAISVNEALD-------KAVPTHYPEKIHESMRYSLLAGGKRVRPTLCIAA 149

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  +LIHDDLP MDN  +RRGKPT H  + E TA++AG+
Sbjct: 150 CELVGGTEDLAMPAACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGD 209

Query: 122 GLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
            LL++AFE I+   ++  ++ R  +++  L  ++G +G++ GQ++DI  E    +D   +
Sbjct: 210 ALLSFAFEHIARSTSKTVESERVLRVICELGKSMGSEGLVAGQIVDIASEGDTSVDLKTL 269

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  +  SGAI+  AS+ E ER R +   +G++FQ+ DD+LD     E+L
Sbjct: 270 EYIHLHKTAVLLECSVVSGAIIGGASEEEIERTRRYARCVGLLFQVVDDILDVTKTSEEL 329

Query: 235 PK 236
            K
Sbjct: 330 GK 331


>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
          Length = 296

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 85/243 (34%), Positives = 129/243 (53%), Gaps = 11/243 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L   L E  + ++  L+D        + +     +L A RY+L  GGK++R  L  
Sbjct: 1   MGFDLKLYLAERKQLVEDALEDCFP-----VPSGLEKSVLEAARYSLFAGGKRLRPILCL 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +   +   A+    A+E IH YSLIHDDLP+MDN   RRGKPT H  + E  A++A
Sbjct: 56  AAAEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ LLT AF+ +S     +       ++ +L    G +GM+GGQ++D   ++  +D   V
Sbjct: 116 GDALLTEAFDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATV 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
             +   KTGAL+  + E GA++   S  +   L+ +G +LG+ FQ+ DDLLD E D   +
Sbjct: 176 EYMHIHKTGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREM 235

Query: 235 PKK 237
            KK
Sbjct: 236 GKK 238


>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha haplocalyx
           var. piperascens]
          Length = 377

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 131/242 (54%), Gaps = 14/242 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   +K ++  L+       + +Q +   ++  ++RY+LL GGK++R  L    
Sbjct: 84  FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 136

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SL+HDDLP MDN  +RRGKPT H+ + E  A++AG+
Sbjct: 137 CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 196

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL++AFE +++           +++  L  ++G +G++ GQ++D+  E + E     + 
Sbjct: 197 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLE 256

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  +   GAI+   ++ E  +LR F   +G++FQ+ DD+LD     ++L 
Sbjct: 257 FIHHHKTAALLQGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELG 316

Query: 236 KK 237
           KK
Sbjct: 317 KK 318


>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
          Length = 386

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 82/244 (33%), Positives = 132/244 (54%), Gaps = 15/244 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +       +   +  ++  LD ++         ++  ++  ++RY+LL GGK++R  L  
Sbjct: 90  VEFDFDKYMHSKAIAVNEALDKVI-------PPRYPQKIYESMRYSLLAGGKRVRPILCI 142

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L       A+    AIE IH  SLIHDDLP +DN  +RRGKPT H  + E TAIIA
Sbjct: 143 AACELMGGTEELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIA 202

Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDET 175
           G+ LL+ AFE ++   ++ L  +I  +L+  +    G +G++GGQ++DI+ E    ID  
Sbjct: 203 GDALLSLAFEHVAVSTSRTLGTDIILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLE 262

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            +  +   KT  L+  +   GAIM  AS+++ ER R +   +G++FQ+ DD+LD     E
Sbjct: 263 TLEWVHIHKTAVLLECSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSE 322

Query: 233 DLPK 236
           +L K
Sbjct: 323 ELGK 326


>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
 gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
          Length = 295

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 84/240 (35%), Positives = 129/240 (53%), Gaps = 12/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   L++  + +D  L+  L         +    L  A+RY++  GGK++R  L+    
Sbjct: 2   DLKEYLKQKCQLVDQALERYLPD-----GKELPASLHGAMRYSVFAGGKRVRPVLMLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    +    A+E IH YSLIHDDLP+MDN   RRG PT H  Y E TAI+AG+ 
Sbjct: 57  EAVGGSPQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           LLT AF ++S+         R +++  +    G +GM+GGQ++D++ E    +D   +  
Sbjct: 117 LLTEAFILLSANGEGGDPAARLRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I   KTGAL+  +  SGAIM  AS+ + + L  + + +G+ FQ+ADD+LD E    +L K
Sbjct: 177 IHTHKTGALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGK 236


>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
 gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
          Length = 294

 Score =  255 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 11/237 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              +L+E  + I+  L  +L         ++   +  A++Y++  GGK++R  L      
Sbjct: 2   FKEQLKEKQQLIEKELHRILEVE------ENPQIIYEAMKYSVFAGGKRLRPVLCLSSCE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF  +   AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+GL
Sbjct: 56  LFEGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115

Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L  AFE++     +   +     +    +    G +GM+GGQ++DI  Q+  +   ++  
Sbjct: 116 LNLAFEVLIRHALENPHDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKF 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + KTGAL+  +  +GA +A A + +   LR +   +G+ FQ+ DD+LD   +  K
Sbjct: 176 MHEHKTGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEK 232


>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
          Length = 383

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 15/242 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 ++  +  ++  LD         +  ++ +++  A+RY+LL GGK++R  L    
Sbjct: 89  FDFKEYMRSKAMSVNEALDR-------AVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAA 141

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++AG+
Sbjct: 142 CELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGD 201

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
            LL++AFE I+ S    ++ +   +++  L   IG +G+ GGQ+ D     +  +    +
Sbjct: 202 ALLSFAFEHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETL 261

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  +  SGAI+  AS +E ER+R +   +G++FQ+ DD+LD     E+L
Sbjct: 262 EWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEEL 321

Query: 235 PK 236
            K
Sbjct: 322 GK 323


>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 371

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 125/238 (52%), Gaps = 15/238 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    S +   ++ ++  LD       S +  +   ++  A+ Y+LL GGK++R  L   
Sbjct: 73  SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIA 125

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 126 ACELVGGEESTAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185

Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
           + LL+++FE ++S  +   +      + +  L   IG +G++ GQ++DI  E +D     
Sbjct: 186 DALLSFSFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              +  I   KT AL+  +   GAI+   S +E ERLR F   +G++FQ+ DD+LD  
Sbjct: 246 LEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVT 303


>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
          Length = 383

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 15/242 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 ++  +  ++  LD         +  ++ +++  A+RY+LL GGK++R  L    
Sbjct: 89  FDFKEYMRSKAMSVNEALDR-------AVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAA 141

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++AG+
Sbjct: 142 CELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGD 201

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
            LL++AFE I+ S    ++ +   +++  L   IG +G+ GGQ+ D     +  +    +
Sbjct: 202 ALLSFAFEHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETL 261

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  +  SGAI+  AS +E ER+R +   +G++FQ+ DD+LD     E+L
Sbjct: 262 EWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEEL 321

Query: 235 PK 236
            K
Sbjct: 322 GK 323


>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
          Length = 316

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 11/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 + E S+ ++  L+D +     H       ++  A+RY+LL GGK++R  L    
Sbjct: 23  FNFNLYMVEKSRSVNQALNDAVSLREPH-------KIHEAMRYSLLAGGKRVRPVLCIAA 75

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +   N  TA+    +IE IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 76  CEVVGGNESTAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGD 135

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            LL +AFE I+   + +        +  L  +IG +G++ GQ++DI  E    I   ++ 
Sbjct: 136 ALLAFAFEHIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLE 195

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I   KT AL+  +   GAI+      E E+LR F   +G++FQ+ DD+LD  
Sbjct: 196 FIHLHKTAALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVT 248


>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
 gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
 gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
 gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
          Length = 393

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 81/242 (33%), Positives = 132/242 (54%), Gaps = 15/242 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 ++  +  +D  LD         +  ++ +++  ++RY+LL GGK++R  L    
Sbjct: 99  FDFNEYMKSKAVAVDAALD-------KAIPLEYPEKIHESMRYSLLAGGKRVRPALCIAA 151

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP MDN   RRGKPT H  + E TA++AG+
Sbjct: 152 CELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGD 211

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF---IDETQV 177
            LL++AFE I+   ++   + R+  ++S     IG QG++GGQ++DI  E    +D   +
Sbjct: 212 ALLSFAFEHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTL 271

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  +  SG I+  A+++E  R+R +   +G++FQ+ DD+LD     E+L
Sbjct: 272 EWIHIHKTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEEL 331

Query: 235 PK 236
            K
Sbjct: 332 GK 333


>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115928|ref|YP_004186087.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 294

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 11/237 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              KL+E  + ++  L  +L            + +  A+RY++  GGK++R  L      
Sbjct: 2   FKEKLREKQQLVEKELHRILDIDEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+GL
Sbjct: 56  LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115

Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L   +E++     +  ++     +    +    G +G++GGQ++DI  Q+  +   ++  
Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKF 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + KTGAL+  +  +GA +A A++ E   LR +   +G  FQ+ DD+LD   +  K
Sbjct: 176 MHEHKTGALIEASVCAGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEK 232


>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 294

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 83/233 (35%), Positives = 126/233 (54%), Gaps = 7/233 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L+E  K    I+D  +L+    +      RL  A++Y+L  GGK++R  L      +  
Sbjct: 2   ELKEYLKERKAIIDREILKYLPSVPP-FGKRLYEAVKYSLTVGGKRLRPILCMAGCEVVG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N+  AL    AIE IH YSLIHDDLP+MDN  +RRG PT   ++DE TAI+AG+ LL  
Sbjct: 61  GNYEEALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDALLNR 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
           AFE++S         I+   +  ++   G+ GM+ GQ  D+  E    +   ++  I + 
Sbjct: 121 AFEVLSQWNFDCDRKIKV--IEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRH 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KTG L+  +  SG I    S+ E   L+ +G+++G+ FQ+ DD+LD   D  K
Sbjct: 179 KTGRLITASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDVIGDQNK 231


>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
 gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
 gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
 gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
 gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
 gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
          Length = 294

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 125/237 (52%), Gaps = 11/237 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              KL+E  + ++  L  +L            + +  A+RY++  GGK++R  L      
Sbjct: 2   FKEKLREKQQLVEKELHRILDIEEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+GL
Sbjct: 56  LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115

Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L   +E++     +  ++     +    +    G +G++GGQ++DI  Q+  +   ++  
Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTKLTYEELKF 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + KT AL+  +  +GA +A A++ +   LR +   +G  FQ+ DD+LD   +  K
Sbjct: 176 IHEHKTAALIEASVCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEK 232


>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 294

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 11/237 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              +L+E  + I+  L  +L         ++   +  A++Y++  GGK++R  L      
Sbjct: 2   FKEQLKEKQQLIEKELHRILEVE------ENPQIIYEAMKYSVFAGGKRLRPVLCLSSCE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF  +   AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+GL
Sbjct: 56  LFEGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115

Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L  AFE++     +   +     +    +    G +GM+GGQ++DI  Q+  +   ++  
Sbjct: 116 LNLAFEVLIRHALENPHDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKF 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + KTGAL+  +  +GA +A A + +   LR +   +G+ FQ+ DD+LD   +  K
Sbjct: 176 MHEHKTGALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEK 232


>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
 gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
          Length = 302

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 130/241 (53%), Gaps = 15/241 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L   LQE    ++T LD  L+ T           +  A+RY+LL GGK++R  L    
Sbjct: 11  FSLAQYLQEQKTIVETALDQSLVITE-------PVTIYEAMRYSLLAGGKRLRPILCLAA 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +       A+    A+E IH  SLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+
Sbjct: 64  CEMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL+YAFE ++     +      Q+++ L   +G +G++GGQ++D++ E   +     + 
Sbjct: 124 ALLSYAFEYVAR-TPDVPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLN 182

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KTGAL+     +GAI+A A   E + L  + +N+G+ FQ+ DD+LD     E+L 
Sbjct: 183 FIHTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELG 242

Query: 236 K 236
           K
Sbjct: 243 K 243


>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
 gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
          Length = 382

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 82/234 (35%), Positives = 128/234 (54%), Gaps = 12/234 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L   +  ++  LD         +Q ++ +++  A+RY+LL GGK++R  L    
Sbjct: 88  FDFKEYLLSKAMAVNEALDR-------AVQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAA 140

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP MDN   RRGKPT H  + E TA++AG+
Sbjct: 141 CELVGGTEKLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAVLAGD 200

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
            LL++AFE I+ S    +  +   +++  L   IG QG++GGQ+ DI  E    +D   +
Sbjct: 201 ALLSFAFEHIAVSTSKSVGSDRILRVVSELGRTIGSQGLVGGQVADITSEGNASVDLDTL 260

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             I   KT  L+  +   GAI++ AS+NE ER++ +  ++G++FQ+ DD+LD  
Sbjct: 261 EWIHIHKTAVLLECSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDILDVT 314


>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
 gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
          Length = 309

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/241 (35%), Positives = 130/241 (53%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L S L+E  + ++  LD       + +     +++  A+RY+LL GGK++R  L    
Sbjct: 17  FDLVSYLKEKKQLVEAALD-------ASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTT 69

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       AL    A+E IH  SLIHDDLP+MDN   RRG+ T H  Y E  AI+AG+
Sbjct: 70  CELMGGTVEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGD 129

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            LL+YAFE +++    +       ++  L   +G  G++GGQ+LD++ E    I    + 
Sbjct: 130 ALLSYAFEHVATQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILK 189

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLP 235
            I   KTGAL+  +  SGAI+A A+  + ERL  + +N+G+ FQ+ DD+LD      +L 
Sbjct: 190 FIHVHKTGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAELG 249

Query: 236 K 236
           K
Sbjct: 250 K 250


>gi|296133204|ref|YP_003640451.1| Polyprenyl synthetase [Thermincola sp. JR]
 gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
          Length = 299

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 137/236 (58%), Gaps = 7/236 (2%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64
            + L+E  ++++ I+++ L Q     + ++ + +  ++RY+ L GGK++R  LV   A  
Sbjct: 4   KAFLKELKRKVN-IIEEALSQYLPG-EDEYPETIHQSMRYSMLAGGKRLRPVLVLAAAEA 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +    +    AIE IH YSLIHDDLP+MD+   RRGKPT H+ Y E  AI+AG+ LL
Sbjct: 62  VGGDVKKVIPAACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHVVYGEAIAILAGDALL 121

Query: 125 TYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMI 180
           T AFE++SS   +  +      +++  ++   G +G++GGQ++DI  E +D     +  I
Sbjct: 122 TLAFEVLSSLVEEPGIDPQKVLRVIKEISLAAGSRGLIGGQVVDIGSENLDISAETLKYI 181

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTGAL   A ++GAI++ AS+ +   L  +   LG+ FQ+ DD+LD E D  K
Sbjct: 182 HIHKTGALFKAALKTGAILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTEK 237


>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 293

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 85/232 (36%), Positives = 123/232 (53%), Gaps = 10/232 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L E  + I+  L+ LL            + L  A+RY++  GGK++R  L      L   
Sbjct: 6   LMEKIEYINNGLNKLLDIDDK------PEILYDAMRYSVFAGGKRLRPVLCISSCELVGG 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+ LL Y 
Sbjct: 60  DRDDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYG 119

Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
           FE++        +     +    + H  G  GM+GGQ++D   +++ I E ++  +   K
Sbjct: 120 FEVLIHHALDSANCQNILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           TGAL+  +  +GAIM  A     ++L  + E +G+ FQ+ DD+LD   D  K
Sbjct: 180 TGALIKASVVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESK 231


>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
 gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
          Length = 309

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 12/236 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L + L E  +  D  LD         +   + +++  A+RY+LL GGK++R  L   
Sbjct: 15  QFNLYAYLGERQQLCDAALD-------KSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLA 67

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG
Sbjct: 68  TCEMIGGTIGMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAG 127

Query: 121 NGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           +GLL  +FE +++   Q +  +   Q++  +    G  G++GGQ++D+  E    I    
Sbjct: 128 DGLLALSFEFVATQTPQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLET 187

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I   KT AL+  +   G I+A AS  + ++L C+ +N+G+ FQ+ DD+LD   
Sbjct: 188 LNFIHNHKTAALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITA 243


>gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 309

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L S L+E    +++ LD  L+         +  ++  A+RY+LL GGK++R  L   
Sbjct: 16  NFSLASYLEEKRLIVESALDSSLV-------IGNPAKIYEAMRYSLLAGGKRLRPILCLA 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   AL    A+E IH  SLIHDDLP+MDN   RRGK T H  + E  AI+AG
Sbjct: 69  TCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +GLL YAFE +++    +      +++  L   +G  G++GGQ+LD++ E    I    +
Sbjct: 129 DGLLAYAFEYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTGAL+  +  SGA++A A   +  +L  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 189 GFIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEEL 248

Query: 235 PK 236
            K
Sbjct: 249 GK 250


>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
 gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
          Length = 302

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 132/242 (54%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L   LQ     ++  LD       S +     +++  A+RY+LL GGK++R  L   
Sbjct: 9   DFDLAQYLQVKKGVVEAALD-------SSLAIARPEKIYEAMRYSLLAGGKRLRPILCIT 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   AL    A+E IH  SLIHDDLPSMDN   RRGKPT H  Y E  AI+AG
Sbjct: 62  ACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAG 121

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +GLL YAFE + +   Q       Q++  L   +G  G++GGQ+LD++ E    I    +
Sbjct: 122 DGLLAYAFEYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETL 181

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTGAL+  +  +GAI+A A+  +++RL  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 182 TFIHTHKTGALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEEL 241

Query: 235 PK 236
            K
Sbjct: 242 GK 243


>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 309

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 76/235 (32%), Positives = 122/235 (51%), Gaps = 12/235 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L + L E  +  D  LD         +   + + +  A+RY+LL GGK++R  L    
Sbjct: 16  FNLYAYLGERQQLCDAALD-------KSIPLVYPETIYEAMRYSLLAGGKRVRPILCLAT 68

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y E  AI+AG+
Sbjct: 69  CEMIGGTIEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGD 128

Query: 122 GLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           GLL  +F+++++   Q     R+ +++  +    G  G++GGQ++D+  E    I    +
Sbjct: 129 GLLALSFQLVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KT AL+  +   G I+A A+  + ++L  + +N+G+ FQ+ DD+LD   
Sbjct: 189 NFIHNHKTAALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDITA 243


>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
 gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
 gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
          Length = 377

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 11/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   +K ++  L+       + +Q +   ++  ++RY+LL GGK++R  L    
Sbjct: 84  FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 136

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SL+HDDLP MDN  +RRGKPT H+ + E  A++AG+
Sbjct: 137 CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 196

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL++AFE +++           +++  L  +IG +G++ GQ++D+  E + E     + 
Sbjct: 197 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLE 256

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I   KT AL+  +   GAI+    + E  +LR F   +G++FQ+ DD+LD  
Sbjct: 257 FIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVT 309


>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
          Length = 361

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/240 (32%), Positives = 124/240 (51%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S + E    ++  LD       + +  +   ++  ++RY+LL GGK+IR  +    
Sbjct: 69  FNFDSYMLEKVNMVNEALD-------ASVPLKDPIKIHESMRYSLLAGGKRIRPMMCIAA 121

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +   N L A+    A+E IH  SL+HDDLP MDN   RRGKP  H  Y E  A++ G+
Sbjct: 122 CEIVGGNILNAMPAACAVEMIHTMSLVHDDLPCMDNDDFRRGKPISHKVYGEEMAVLTGD 181

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
            LL+ +FE I++    +  +   + +  L  ++G +G++ GQ++DI  E  D     +  
Sbjct: 182 ALLSLSFEHIATATKGVSKDRIVRAIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEY 241

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           I   KT  L+  +   GAIM   S  + E+LR F  ++G++FQ+ DD+LD     E+L K
Sbjct: 242 IHIHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVDDILDVTKSTEELGK 301


>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 359

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 + E ++R++  LDD        +  +H  ++  A+RY+LL GGK++R  L    
Sbjct: 67  FQFEEYMAEMAERVNQALDD-------SVPLRHPLKIHEAMRYSLLAGGKRVRPILCIAS 119

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   + + A  +  A+E IH  SLIHDDLP MDN   RRG PT H  + E TA++AG+
Sbjct: 120 CELVGGDPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGD 179

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE +++  T +  +   +++  L   +G  G++GGQ++DI      I+ +++  
Sbjct: 180 ALLSLAFEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEY 239

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT  L+  +   GAIM      + ERLR +   +G++FQ+ DD+LD     E+L K
Sbjct: 240 IHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDVTKSSEELGK 299


>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
 gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
          Length = 308

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 7/216 (3%)

Query: 28  ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
            S +   + +++  A+RY+LL GGK++R  L      L       A+    A E  H  S
Sbjct: 34  DSAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCELLGGTVEMAMPTACAFEMSHTMS 93

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDDLP+MDN   RRGK T H  Y E  AI+AG+GLL YAFE I++    +      Q+
Sbjct: 94  LIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEFIAAQTQNVPPQQVLQV 153

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           +  L   +G   ++GGQ++D++ E    + E  +  I   KTGAL+      GAI+A A 
Sbjct: 154 VARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIHTHKTGALLEACVVCGAILAGAE 213

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             + +RL  + +N+G+ FQ+ DD+LD     E+L K
Sbjct: 214 PTDLQRLSRYAQNIGLAFQIVDDILDITATQEELGK 249


>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
 gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
          Length = 287

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 14/235 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + E    ++  LD         +   + +++  A+RY+LL GGK++R  L      L   
Sbjct: 1   MAERKAEVEQALDR-------SIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGG 53

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+    ++E IH  SLIHDDLP+MDN   RRG+ T H  Y E  AI+AG+GLL+YA
Sbjct: 54  TMEMAMPTACSLEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYA 113

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184
           FE +++  T +       ++  L   +G  G++GGQ++D++ E    I E Q+  I   K
Sbjct: 114 FEFVATQTTNVPPQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           TGAL+     SGAI+A  S   +ERL  + + +G+ FQ+ DD+LD     E+L K
Sbjct: 174 TGALLEACVVSGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGK 228


>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
 gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
          Length = 295

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 12/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   L++  + +D  L+  L         +    L  ++RY++  GGK++R  L+    
Sbjct: 2   DLKQYLKQKCELVDQSLERFLPH-----GKELPASLHGSMRYSVFAGGKRVRPVLLLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    AL    A+E IH YSLIHDDLP+MDN   RRG PT H  Y E TAI+AG+ 
Sbjct: 57  EAVGGALKPALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           LLT AF ++S     +    R +++  + H  G +GM+GGQM+D++ E    ID   +  
Sbjct: 117 LLTEAFILLSGNGEGVDPAARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I   KTGAL+  +  +GAI+  A +   + L  + + +G+ FQ+ADD+LD E    +L K
Sbjct: 177 IHTHKTGALIRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGK 236


>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 288

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 130/235 (55%), Gaps = 14/235 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++  ++ ++  LD         +  Q+ +++  A+RY+LL GGK++R  L      L   
Sbjct: 1   MKSKAQAVNVALD-------KAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGG 53

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   ++    A+E +H  SLIHDDLP MDN  +RRGKPT H  + E TA++AG+ LLTYA
Sbjct: 54  NEEMSMPAACAMEMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYA 113

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184
           FE I+   T +  +   +++  L   +G +G++ GQ++DI  E    +    +  +   K
Sbjct: 114 FEHIARDTTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           T  L+  +   GAI+  AS++E  RL  +  N+G++FQ+ DD+LD      +L K
Sbjct: 174 TAVLLESSVVCGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGK 228


>gi|307265160|ref|ZP_07546719.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919782|gb|EFN49997.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 294

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 11/237 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              KL+E  + ++  L  +L            + +  A+RY++  GGK++R  L      
Sbjct: 2   FKEKLREKQQLVEKELHRILDIDEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+GL
Sbjct: 56  LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115

Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L   +E++     +  ++     +    +    G +G++GGQ++DI  Q+  +   ++  
Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKF 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + KTGAL+  +  +GA +A A++ E   LR +   +G  FQ+ DD+LD   +  K
Sbjct: 176 MHEHKTGALIEASVCAGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEK 232


>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 299

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 128/238 (53%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +      L++  K I+  LD         +  ++ + L  ++RY+LL GGK+IR  L   
Sbjct: 7   SYDFEKYLKQTKKVIEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLA 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             SL       A+    AIE IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG
Sbjct: 60  SCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + LLT AFE++S     +  N    ++  L+   G  G++GGQ++D++ E   +D   + 
Sbjct: 120 DALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLE 179

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I   KTGAL+     +GA++A A++   + L  + E +G+ FQ+ DD+LD      K
Sbjct: 180 YIHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 237


>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
          Length = 364

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + E +  ++  LDD +         ++   +  A+RY+LL GGK++R  L    
Sbjct: 71  FNFNAYVVEKANHVNKALDDAVA-------VRNPPMIHDAMRYSLLAGGKRVRPMLCIAA 123

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +       A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + +  A++AG+
Sbjct: 124 CEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGKDVAVLAGD 183

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178
            LL +AFE +++  T +        +  L   IG +G++ GQ++D+    D  +    + 
Sbjct: 184 ALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLE 243

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  +   GAI+   S ++ E+LR F   +G++ Q+ DD+LD     E+L 
Sbjct: 244 FIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDILDVTKSSEELG 303

Query: 236 K 236
           K
Sbjct: 304 K 304


>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
 gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
          Length = 345

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 128/234 (54%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    + + + +K ++  +D+        +  ++ + L  ++RY+LL GGK++R  L   
Sbjct: 52  SFDFNTYMVDRAKLVNKAMDE-------AVPLKYPETLNESMRYSLLAGGKRVRPALCLA 104

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   AL    A+E +H  SLIHDDLPSMDN   RRG+PT H  Y E  AI+AG
Sbjct: 105 ACELVGGDIHAALPAACAMEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAG 164

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + LL+++FE I+     +      ++++ L   +G  G++ GQ++DIQ E   +    + 
Sbjct: 165 DALLSFSFEHIARATKGVPAERVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLK 224

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I + KT AL+  +   GAI+  A ++  E+LR +  N+G+ FQ+ DD+LD   
Sbjct: 225 YIHEHKTAALLEASVVCGAILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTA 278


>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
           elongatus BP-1]
 gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
           elongatus BP-1]
          Length = 307

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 125/235 (53%), Gaps = 11/235 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L + L+E    ++  L+       + +   + +++  A+RY+L+ GGK++R  L   
Sbjct: 14  TFDLKAYLKERQALVEAALE-------ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLA 66

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+    A+E IH  SLIHDDLP+MDN   RRGKPT H  Y E  AI+AG
Sbjct: 67  TCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAG 126

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +GLL YAFE +      +      +++  L H +   G++GGQ++D++ E    I    +
Sbjct: 127 DGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETL 186

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGAL+  +  SGA++  A +++  RL  +  N+G+ FQ+ DD+LD   
Sbjct: 187 HFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITS 241


>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 300

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L+E  K ++  LD         +  ++ + L  ++RY+LL GGK+IR  L    
Sbjct: 9   SDFDKYLKETKKIVEEALD-------LSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            SL       A+    AIE IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 62  CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE++S     +  N    ++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 122 ALLTRAFEMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTGAL+     +GA++A A+    + L  + E +G+ FQ+ DD+LD      K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEK 238


>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
           9312]
          Length = 300

 Score =  251 bits (641), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 10/237 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L+   K ++  LD         +  ++ + L  ++RY+LL GGK+IR  L    
Sbjct: 9   SDFEEYLKNAKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            SL       A+    AIE IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 62  CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE++S     +       ++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTGAL+     +GA++A A++   + L  + E +G+ FQ+ DD+LD      K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238


>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
           elongatus]
          Length = 307

 Score =  251 bits (641), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 125/235 (53%), Gaps = 11/235 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              + + L+E    ++  L+       + +   + +++  A+RY+L+ GGK++R  L   
Sbjct: 14  TFDVKAYLKERQALVEAALE-------ASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLA 66

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+    A+E IH  SLIHDDLP+MDN   RRGKPT H  Y E  AI+AG
Sbjct: 67  TCELMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAG 126

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +GLL YAFE +      +      +++  L H +   G++GGQ++D++ E    I    +
Sbjct: 127 DGLLAYAFEYVVEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETL 186

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGAL+  +  SGA++  A +++  RL  +  N+G+ FQ+ DD+LD   
Sbjct: 187 HFIHSHKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITS 241


>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
           str. MIT 9202]
 gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
           str. MIT 9202]
          Length = 300

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 10/237 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L+   K ++  LD         +  ++ + L  ++RY+LL GGK+IR  L    
Sbjct: 9   SDFEKYLKNTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            SL       A+    AIE IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 62  CSLAGGKPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE++S     +       ++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTGAL+     +GA++A A++   + L  + E +G+ FQ+ DD+LD      K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238


>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
          Length = 387

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 83/244 (34%), Positives = 126/244 (51%), Gaps = 15/244 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +       +   +  +   LD  +  +       +  ++  ++RY+LL GGK++R  L  
Sbjct: 91  VEFDFNKYMLSKAMAVTEALDKAIPHS-------YPQKIHESMRYSLLAGGKRVRPVLCI 143

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L       A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + + TA++A
Sbjct: 144 AACELVGGREELAMPTACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGQDTALLA 203

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDET 175
           G+ L  +AFE I++     +  +   + +  L    G QG++GGQ++DI   +D F+D  
Sbjct: 204 GDALHAFAFEHIVAFTSKSVGSDGILRAVTELARATGPQGIMGGQIVDIASERDAFVDLQ 263

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KT  L   A   GAI+  AS +E ER+R F   LG++FQ+ DD+LD     E
Sbjct: 264 TLEWIHIHKTAVLFECATVCGAIIGGASGDEIERIRRFARYLGLLFQVVDDILDVTKSSE 323

Query: 233 DLPK 236
           DL K
Sbjct: 324 DLGK 327


>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
 gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
          Length = 314

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/240 (32%), Positives = 125/240 (52%), Gaps = 13/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +    K+++  L++        +  QH  ++  A+RY+LLG GK++   L    
Sbjct: 22  FQFKEYMLTKLKQVNEALEE-------AVPLQHPIKIHEAMRYSLLGNGKRMCPILCIAS 74

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+ +  A+E +H  SLIHDDLP MDN  +RRGKPT H  + E  AI+AG+
Sbjct: 75  CELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIAILAGD 134

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE I+S    +  +   + +  L   IG +G++ GQ++DI  E   +    +  
Sbjct: 135 ALLSLAFEHIASKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSMKTLEY 194

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT  L+  +   GAIM  A     ERLR +  ++G+++Q+ DD+LD     E+L K
Sbjct: 195 IHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSSEELGK 254


>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 300

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 125/237 (52%), Gaps = 10/237 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L+   K ++  LD         +  ++ + L  ++RY+LL GGK+IR  L    
Sbjct: 9   SDFEKYLKNTKKVVEEALD-------VSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            SL       A+    AIE IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 62  CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE++S     +       ++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTGAL+     +GA++A A++   + L  + E +G+ FQ+ DD+LD      K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEK 238


>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 294

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 81/241 (33%), Positives = 125/241 (51%), Gaps = 14/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              K +   + ++  L  +L            + +  A+RY++  GGK++R  L      
Sbjct: 2   FKEKFKNLQQMVEEELHRILDVQEK------PEIIYEAMRYSVFAGGKRLRPVLCLSACE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   AL V  +IE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GL
Sbjct: 56  LLGGDLKKALPVACSIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAILAGDGL 115

Query: 124 LTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L   +E++   + +         +    +    G +G++GGQ+ DI  Q+  +   ++  
Sbjct: 116 LNLGYEVLIRHALENPEDYEKILKAANEIATASGCKGIIGGQVEDILSQNTELTYEELKY 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           I + KT AL+  +  +GA MA AS+ E E LR +   +G+ FQ+ DD+LD   D   L K
Sbjct: 176 IHEHKTAALIEASVCAGAHMAGASEKEVELLREYAGLIGLAFQIKDDILDVIGDEKTLGK 235

Query: 237 K 237
           K
Sbjct: 236 K 236


>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 295

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 74/237 (31%), Positives = 120/237 (50%), Gaps = 9/237 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              S  +   K ++  +   L    +     +   +  A+ Y+L  GGK++R  L+    
Sbjct: 2   EFESLFKRYRKMVEEGIGRFLPPDDT-----YPPVIHQAMNYSLKAGGKRLRPVLMLAAG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
               +     L     +EC+H YSLIHDDLP+MDN   RRGKPT H  + E  AI+AG+ 
Sbjct: 57  EWSGIAPEKLLPAAVGVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDA 116

Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
           LLT AFE+ + + +  +      +++  L    G +G++ GQ++D+       D   +  
Sbjct: 117 LLTKAFELTAKTLEQGIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KT  L+ ++  +G I+A A++ E + L  +G +LG+ FQ+ DDLLD   D  K
Sbjct: 177 IHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQK 233


>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 371

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 124/235 (52%), Gaps = 15/235 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    S +   ++ ++  LD       S +  +   ++  A+RY+LL GGK++R  L   
Sbjct: 73  SFDFMSYIITKAELVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIA 125

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 126 ACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 185

Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
           + LL++AFE ++S  +   +      + +  L   IG +G++ GQ++DI  E +D     
Sbjct: 186 DALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVG 245

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              +  I   KT AL+  +    AI+   S +E ERLR F   +G++FQ+ DD+L
Sbjct: 246 LEHLEFIHLHKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDIL 300


>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
          Length = 299

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +      L++   R++  LD       + +  +  ++L  ++RY+LL GGK++R  L   
Sbjct: 7   SFDFAEYLEKARTRVEDALD-------ASLGPEKPEKLRESMRYSLLAGGKRLRPILCLA 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       AL    A+E IH  SLIHDDLPSMDN  +RRG+PT H  Y +  AI+AG
Sbjct: 60  ACELAGGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
           + LLT AFE++S     +      +++  L+   G  G++GGQ   LD + + +D   + 
Sbjct: 120 DALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLE 179

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KTGAL+      GA++  A +   E L  +   +G+ FQ+ DD+LD   
Sbjct: 180 YIHLHKTGALLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDILDVTA 233


>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
           15579]
 gi|187773137|gb|EDU36939.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
           15579]
          Length = 290

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 139/236 (58%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + I+  L + L    +     ++ ++  A+ Y+L  GGK+IR  L+    +L+ 
Sbjct: 3   KIKKIGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLLLNTYALYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +N       ++    G+ GM+GGQ++DI  +D+ I   +++ + K K
Sbjct: 118 AMNIMFEYSLKNGENALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 TGALIKASILAGAILGSATSTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 297

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 90/239 (37%), Positives = 134/239 (56%), Gaps = 11/239 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   ++ N   +D  L + L       ++++   +  A+ Y++  GGK++R  L     
Sbjct: 2   SLDVFMKNNKNLVDQKLQEYLPN-----KSEYPTAIHEAMHYSVFAGGKRLRPLLTLAAG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF  N  T L    AIE IH YSLIHDDLP++DN  +RRGK T H+ + E  AI+AG+ 
Sbjct: 57  DLFGANKKTILPFACAIELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
           LL YAFE+++S   +   + R+    +  +    G +GM+GGQ++DI+ E    ID   V
Sbjct: 117 LLNYAFELMTSKGVENFTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I K KTGAL   +   GAI++ ASQ + E+L  + + LG+ FQ+ DD+LD E D  K
Sbjct: 177 SYIHKHKTGALFTASIRIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQK 235


>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
 gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
          Length = 366

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/243 (34%), Positives = 131/243 (53%), Gaps = 15/243 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L S LQ     ++  LD+ L         ++ D++  A+RY+LL GGK++R  L   
Sbjct: 71  SFDLQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIA 123

Query: 61  CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            + +        A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++A
Sbjct: 124 ASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLA 183

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176
           G+ +L+ AFE I+     +      +++  L   +G QG++ GQ++DI     E +D   
Sbjct: 184 GDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDT 243

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KTG L+  A   GAI   AS+ E  R+R + + +G++FQ+ DD+LD     ++
Sbjct: 244 LRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQE 303

Query: 234 LPK 236
           L K
Sbjct: 304 LGK 306


>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
 gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
          Length = 309

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 12/236 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L + LQ+  K  +T LD  +          + +++  ++RY+LL GGK++R  L   
Sbjct: 15  TFNLAAYLQKRKKLCETALDQAI-------PVIYPEKIYESMRYSLLAGGKRLRPILCLA 67

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +       A+    A+E IH  SLIHDDLP+MDN   RRG+ T H  Y +  AI+AG
Sbjct: 68  ACEMIGGTISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAG 127

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF---IDETQ 176
           +GLL YAFE +++   +     R   +++     +G  G++GGQ++D+  E    I    
Sbjct: 128 DGLLAYAFEFVATQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLET 187

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I   KT AL+  +   G I+A AS    +RL  + +N+G+ FQ+ DD+LD   
Sbjct: 188 LNFIHNHKTAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITA 243


>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
 gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
          Length = 343

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 14/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              + + + +K I+  L D + +        + +RL  ++RY+LL GGK+IR  L     
Sbjct: 48  DFGNYIADKNKAIEQALSDSVPEM-------YPERLHESMRYSLLAGGKRIRPCLCIAAC 100

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L       A+    A+E IH  SLIHDDLPSMDN   RRGKPT H  Y E  AI+AG+ 
Sbjct: 101 ELMGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 160

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLT-HNIGLQGMLGGQMLDIQDEFID-----ETQ 176
           LL++AFE I     +     R+  +L      +G +G++GGQ++DI  E  D        
Sbjct: 161 LLSHAFEYIGRETPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLET 220

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I   KTGAL+  +  SGAI+A A + + ERL  + + +G+ FQ+ DD+LDC +
Sbjct: 221 LKYIHAHKTGALLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQ 276


>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 300

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 125/236 (52%), Gaps = 10/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
                L +  K ++  LD         +  ++ + L  ++RY+LL GGK+IR  L     
Sbjct: 10  DFEKYLTDTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLASC 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           SL       A+    AIE IH  SLIHDDLP+MDN   RRG+PT H  Y +  AI+AG+ 
Sbjct: 63  SLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDA 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLT AFE++S     +  N    ++  L+   G  G++GGQ++D++ E   +D   +  I
Sbjct: 123 LLTRAFEMVSLRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYI 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTGAL+  +  +GA++A A++     L  + E +G+ FQ+ DD+LD      K
Sbjct: 183 HLHKTGALLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEK 238


>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
 gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
          Length = 300

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 81/233 (34%), Positives = 124/233 (53%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L+    +++  LD       S +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 9   FDFSHYLEAGRLKVEQALD-------SSLGPERPESLREAMRYSLLAGGKRLRPILCLAS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   AL    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y + TAI+AG+
Sbjct: 62  CELAGGDASLALPTATALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE+++     +      +++  L+   G  G++GGQ++D+  E   +D   +  
Sbjct: 122 ALLTRAFEMVALRSPDVPAERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDLDTLEY 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+  +  SGA++A A     E LR +   +G+ FQ+ DD+LD   
Sbjct: 182 IHLHKTGALLQASVLSGALIAGADDTLLEALRTYSRAIGLAFQIIDDILDVTA 234


>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 295

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 102/236 (43%), Positives = 138/236 (58%), Gaps = 10/236 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           NG L     E  K+ID  L  ++      +Q      L  A+ Y+L  GGK+IR  L+  
Sbjct: 3   NGTLKHFFDEEKKQIDNRLPHIIENLNIPVQ------LRDAMIYSLKAGGKRIRPMLLLA 56

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
               +N        V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG
Sbjct: 57  TLRGYNKPLSHGYDVACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAG 116

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVF 178
           +GLLTY+F++ISS    L DN++  L+  ++   G +GM+GGQ+LD+Q E I     Q+ 
Sbjct: 117 DGLLTYSFQLISSS-MLLPDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQLQ 175

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            I   KTG L+  + ESGAI+A  S+NE+  L  F ++LGI FQ+ DD+LD E D 
Sbjct: 176 KIHHHKTGDLLAVSVESGAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGDE 231


>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
 gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
          Length = 300

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 124/237 (52%), Gaps = 10/237 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L+   K ++  LD         +  ++ + L  ++RY+LL GGK+IR  L    
Sbjct: 9   SDFEKYLKNTKKVVEEALD-------FSLGPENPEILRESMRYSLLAGGKRIRPILCLAS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            SL       A+    AIE IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 62  CSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE++S     +       ++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 122 ALLTRAFEMVSLRSPGVDPTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEY 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTGAL+     +GA++A A++     L  + E +G+ FQ+ DD+LD      K
Sbjct: 182 IHLHKTGALLKACVRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEK 238


>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
           NIES-843]
 gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
           NIES-843]
          Length = 309

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L S L+E    +++ LD  L+         +  ++  A+RY+LL GGK++R  L   
Sbjct: 16  SFSLASYLEEKRLIVESALDSSLV-------IGNPAKIYEAMRYSLLAGGKRLRPILCLA 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   AL    A+E IH  SLIHDDLP+MDN   RRGK T H  + E  AI+AG
Sbjct: 69  TCELMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQV 177
           +GLL YAFE +++    +      +++  L   +G  G++GGQ+LD++      I    +
Sbjct: 129 DGLLAYAFEYVATQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KTGAL+  +  SGA++A A   +  +L  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 189 GFIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEEL 248

Query: 235 PK 236
            K
Sbjct: 249 GK 250


>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
 gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
          Length = 315

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    + L +    ++  LD       + +  +  + L  ++RY+LL GGK++R  L   
Sbjct: 23  DFDFSAYLAKTRNLVEGALD-------AALGPERPESLRESMRYSLLAGGKRLRPILCLA 75

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG
Sbjct: 76  ACELVGGDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAG 135

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + LL+ AFE++S     +      +++  L    G  G++GGQ++D++ E   +D   + 
Sbjct: 136 DALLSRAFEMVSLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLE 195

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KT AL+     +GA++  A  N+ E +R +   +G+ FQ+ DD+LD   
Sbjct: 196 YIHLHKTAALLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTA 249


>gi|303239901|ref|ZP_07326424.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2]
 gi|302592611|gb|EFL62336.1| Polyprenyl synthetase [Acetivibrio cellulolyticus CD2]
          Length = 297

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 84/246 (34%), Positives = 126/246 (51%), Gaps = 16/246 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN       Q  +  ++  LD+ + +            + SA+RY+LL GGK++R  L  
Sbjct: 1   MN--FKENQQRYADLVNAFLDNYVKENDL-----LEKSVYSAMRYSLLAGGKRLRPVLAL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   +    +    AIE +H YSLIHDDLP+MDN   RRGK T H ++ E  AI+A
Sbjct: 54  AVCELLGGDINEVMPFACAIEMVHTYSLIHDDLPAMDNDDFRRGKLTNHKKFGEAIAILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL---THNIGLQGMLGGQMLDIQDEFIDE-- 174
           G+GLL  AFE++         N   Q + ++     + G+ GM+ GQ++D + E  +   
Sbjct: 114 GDGLLNLAFELMIESTATDNCNNAVQKVKAMSYIAKSSGIHGMIAGQVIDTESENKEVAY 173

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
             +  + K KTGAL+     S AI+ +AS+ +   L  +  NLG+ FQ+ DD+LD E   
Sbjct: 174 ETLEYMHKCKTGALIKAPVVSSAIICNASEEDLRSLEAYAGNLGLAFQIKDDILDVEGST 233

Query: 233 -DLPKK 237
             L KK
Sbjct: 234 EKLGKK 239


>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 300

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 79/233 (33%), Positives = 126/233 (54%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L +   RI++ LD       + +  +  ++L  A+RY+LL GGK++R  L    
Sbjct: 9   FDFTAYLAKARTRIESALD-------ASLGPERPNQLREAMRYSLLAGGKRLRPILCLAA 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    AIE IH  SLIHDDLPSMDN  +RRG+PT H  Y E  AI+AG+
Sbjct: 62  CELTGSDSENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE+++     +  +   +++  L+   G  G++GGQ+ D++ E   +D   +  
Sbjct: 122 ALLTRAFEMVALRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEF 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+  +   GA++  A ++    L  + + +G+ FQ+ DD+LD   
Sbjct: 182 IHIHKTGALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDVTA 234


>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
 gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
          Length = 309

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 12/235 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L + L+E  K  +  LD+ +          + +++  ++RY+LL GGK++R  L    
Sbjct: 16  FNLVAYLKERQKLCEAALDEAI-------PVIYPEKIYESMRYSLLAGGKRLRPILCLAT 68

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + +       A+    A+E IH  SLIHDDLP+MDN   RRG  T H  Y +  AI+AG+
Sbjct: 69  SEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGD 128

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           GLL YAFE ++      +  +   Q++  L   +G  G++GGQ++D+  E    I    +
Sbjct: 129 GLLAYAFEFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KT AL+      G I+A AS  + +RL  + +N+G+ FQ+ DD+LD   
Sbjct: 189 NFIHNHKTAALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITS 243


>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 369

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 81/242 (33%), Positives = 126/242 (52%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                S + + +  I+  LD       + +  +   ++  ++RY+LL GGK++R  L   
Sbjct: 75  TFDFKSYMLQKAASINQALD-------AAVPIREPTKIHESMRYSLLAGGKRVRPALCLA 127

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   N   A+    A+E IH  SLIHDDLP MDN  +RRGKPT HI + E  A++AG
Sbjct: 128 ACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAG 187

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + LL  AFE I+     +      + +  L   IG +G++ GQ++DI  E + E    ++
Sbjct: 188 DALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLSEVGLEKL 247

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  A   GAIM   +  E E+LR +  ++G++FQ+ DD+LD     ++L
Sbjct: 248 EFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 307

Query: 235 PK 236
            K
Sbjct: 308 GK 309


>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
 gi|1345836|sp|P48368|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
           Short=GGPP synthase; AltName:
           Full=Farnesyltranstransferase
 gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
          Length = 300

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 84/239 (35%), Positives = 128/239 (53%), Gaps = 11/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           N  L + L E  + ++  L+         +   +   +  +IRY+L  GGK+IR  L   
Sbjct: 7   NFNLLTYLYERKEIVEDTLN-------KSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLA 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       AL    A+E IH  SLIHDDLP+MDN   RRGKPT HI Y E  AI+AG
Sbjct: 60  SCELAGGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
           + LL YAFE I++    +  ++  +++  + H++   G++GGQ++D+  E   +T +   
Sbjct: 120 DALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETL 179

Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I   KTGAL+  A  SGA++A A + +  R   + +N+G+ FQ+ DD+LD      K
Sbjct: 180 NFIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEK 238


>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
 gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
          Length = 349

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 128/236 (54%), Gaps = 14/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              + + E +  I+  L D + +        + +RL  ++RY+LL GGK+IR  L     
Sbjct: 54  DFAAYIAEKNAAIEQALSDSVPEM-------YPERLHESMRYSLLAGGKRIRPCLCIAAC 106

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L       A+    A+E IH  SLIHDDLPSMDN   RRGKPT H  Y E  AI+AG+ 
Sbjct: 107 ELMGGTMDVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDA 166

Query: 123 LLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQ 176
           LL++AFE I       +      ++++ +   +G +G++GGQ++DI  E      +    
Sbjct: 167 LLSHAFEYIGRETPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVET 226

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I   KTGAL+  +  +GAI+A A + + ERL  + + +G+ FQ+ DD+LDC +
Sbjct: 227 LQYIHAHKTGALLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQ 282


>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 306

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
              P+ L      ++  LDD        +  +  ++L  A+RY+LL GGK++R  L    
Sbjct: 15  FDFPAYLAAAKASVEEALDD-------SLGPERPEQLREAMRYSLLAGGKRLRPILCLAA 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       AL    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 68  CELAGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT +FE+++     +      +++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 128 ALLTRSFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEF 187

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+      GA++  A  +  + LR +   +G+ FQ+ DD+LD   
Sbjct: 188 IHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTA 240


>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
 gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
          Length = 317

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L    + ++  LDD        +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 20  FDFKAYLGSQKQLVEAALDD-------SLGPERPESLREAMRYSLLAGGKRLRPILCLAA 72

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 73  CELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 132

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
            LLT AFE++S     +      +++  L+   G  G++GGQ++D   + + +D   +  
Sbjct: 133 ALLTRAFEMVSLRSPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLDTLEY 192

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+     +GA++  A + + + LR +   +G+ FQ+ DD+LD   
Sbjct: 193 IHLHKTGALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTA 245


>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
 gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
          Length = 290

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 138/236 (58%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + I+  L + L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +    +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K K
Sbjct: 118 AMNIMFEYSLKNGEKA-VKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
 gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
          Length = 309

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 123/235 (52%), Gaps = 12/235 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L + L+E  K  +  LD       + +   + +++  ++RY+LL GGK++R  L    
Sbjct: 16  FNLVAYLKERQKLCEAALD-------AAIPIIYPEKIYESMRYSLLAGGKRLRPILCLAT 68

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + +       A+    A+E IH  SLIHDDLP+MDN   RRG  T H  Y E  AI+AG+
Sbjct: 69  SEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGD 128

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
           GLL YAFE ++      +  +   Q++  L   +G  G++GGQ++D+  E   +T +   
Sbjct: 129 GLLAYAFEFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETL 188

Query: 179 -MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KT AL+      G I+A AS    +RL  + +N+G+ FQ+ DD+LD   
Sbjct: 189 NFIHNHKTAALLEACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITS 243


>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
 gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
          Length = 290

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 137/236 (58%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + I+  L + L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +        ++    G+ GM+GGQ++DI  +D+ I   +++ + K K
Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 290

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 88/236 (37%), Positives = 138/236 (58%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + I+  L + L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMIYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +        ++T   G+ GM+GGQ++DI  +D+ I   +++ + K K
Sbjct: 118 AMNIMFEYSLKNGEEALKAC-YTITKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
 gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
 gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
 gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
 gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
          Length = 295

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 129/237 (54%), Gaps = 9/237 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
                L+E +  ++ +L + + +   + +T     ++ A+ Y+L  GGK++R  L  E  
Sbjct: 2   EFKQCLKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   N   A+    AIE IH YSLIHDDLP++DN  +RRG+PT H  Y E   I+AG+ 
Sbjct: 57  KIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDA 116

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LL YAFE +++    +       + +  +    G+ GM+GGQ++D++ E   I++ ++  
Sbjct: 117 LLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KT A+M     +GA +  A+  + E +  + +N+G+ FQ+ DD+LD   D  K
Sbjct: 177 IHMNKTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESK 233


>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
 gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
          Length = 312

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S L +  + ++  LD       + +  +  + L  ++RY+LL GGK++R  L    
Sbjct: 21  FDFSSYLAKTRELVEQSLD-------AALGPERPESLRESMRYSLLAGGKRLRPILCLAA 73

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 74  CELVGGDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGD 133

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LL+ AFE+++     +      +++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 134 ALLSRAFEMVAVRSEGVPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEY 193

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KT AL+     +GA++  A  ++ + +R +   +G+ FQ+ DD+LD   
Sbjct: 194 IHLHKTAALLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTA 246


>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
 gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
 gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
 gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
 gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
 gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
 gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
 gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
 gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
 gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
 gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
 gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile]
 gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
 gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
          Length = 295

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 129/237 (54%), Gaps = 9/237 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
                L+E +  ++ +L + + +   + +T     ++ A+ Y+L  GGK++R  L  E  
Sbjct: 2   EFKQCLKEKASFVEKVLKEYMPKEEGYQKT-----VIEAMNYSLSAGGKRLRPILTLEAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   N   A+    AIE IH YSLIHDDLP++DN  +RRG+PT H  Y E   I+AG+ 
Sbjct: 57  KIVGGNEDEAIPFAIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDA 116

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LL YAFE +++    +       + +  +    G+ GM+GGQ++D++ E   I++ ++  
Sbjct: 117 LLNYAFEVMLAGSINKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KT A+M     +GA +  A+  + E +  + +N+G+ FQ+ DD+LD   D  K
Sbjct: 177 IHMNKTAAMMVGCMRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAK 233


>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
           16646]
 gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
           16646]
          Length = 296

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 10/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L+E  K I+  LD  + ++      ++  ++  A+RY+   GGK+IR  L  + A
Sbjct: 3   NFEIELKEAGKIIEKALDFYIPKSN-----EYPQKIHEAMRYSTFNGGKRIRPVLTMKAA 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF +     +     IE IH YSLIHDDLP MDN   RRGKPT H  + +  A++AG+ 
Sbjct: 58  ELFGLQGEKVIPTACGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDA 117

Query: 123 LLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LLT AF  I        +       ++  ++   G  GM+GGQ +DI  +   IDE  +F
Sbjct: 118 LLTLAFNTIVKNAQIEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLF 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   KTG L+  +  +GA +A A  ++  +L  FGE +G+IFQ+ DDLLD   D  K
Sbjct: 178 YMDYHKTGCLIQASLWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLDICGDEKK 235


>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 299

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +      L++   R++  L        + +  +  ++L  ++RY+LL GGK++R  L   
Sbjct: 7   SFDFAEYLEKARTRVEDAL-------GASLGPEKPEKLRESMRYSLLAGGKRLRPILCLA 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       AL    A+E IH  SLIHDDLPSMDN  +RRG+PT H  Y +  AI+AG
Sbjct: 60  ACELAGGELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
           + LLT AFE++S     +      +++  L+   G  G++GGQ   LD + + +D   + 
Sbjct: 120 DALLTRAFEMVSIRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLE 179

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KTGAL+      GA++  A +   + L  +   +G+ FQ+ DD+LD   
Sbjct: 180 YIHLHKTGALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTA 233


>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
          Length = 312

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L+ + ++++  LD         +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 19  FDFAAYLESSRQQVEQALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAA 71

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP+MDN  +RRG PT H  Y E  AI+AG+
Sbjct: 72  CELAGGDAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGD 131

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
            LLT AFE+++     +      +++  L+   G  G++GGQ++D   + + +D   +  
Sbjct: 132 ALLTRAFEMVALRSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKDVDLETLEY 191

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+     +GA++A AS+     L  +   +G+ FQ+ DD+LD   
Sbjct: 192 IHLHKTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTA 244


>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
          Length = 348

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 17/243 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
               S +   +  ++  LD       S +  +   ++  AIRY+LL  GK++R  L    
Sbjct: 53  FDFTSYMIGKANAVNEALD-------SAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAA 105

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       AL    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 106 CELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 165

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----- 176
            L+++AFE +++  T +      + +  L   IG +G++ GQ++D+    +D+       
Sbjct: 166 ALISFAFEHLATS-TAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEV 224

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KT  L+  A   GAI+   S  E E+LR F   +G++FQ+ DD+LD     E+
Sbjct: 225 LEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 284

Query: 234 LPK 236
           L K
Sbjct: 285 LGK 287


>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
          Length = 288

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 7/223 (3%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D +     + +  ++  ++  ++RY+ L GGK++R  L      L      TA+    A+
Sbjct: 6   DSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAACAV 65

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDDLP MDN  +RRGKPT H+ + E  A++AG+ LL +AFE+I++  T + 
Sbjct: 66  EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVP 125

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196
            +   +++  L  +IG +G++ GQ++DI  E + +     +  I   KT AL+  +   G
Sbjct: 126 ADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLG 185

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           AI+  A+  E E+LR F   +G +FQ+ DD+LD     ++L K
Sbjct: 186 AILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGK 228


>gi|15224197|ref|NP_179452.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75268021|sp|Q9ZU77|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
           chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
           AltName: Full=Dimethylallyltranstransferase 7; AltName:
           Full=Farnesyl diphosphate synthase 7; AltName:
           Full=Farnesyltranstransferase 7; AltName:
           Full=Geranyltranstransferase 7; Flags: Precursor
 gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
           synthetase/farnesyltranstransferase [Arabidopsis
           thaliana]
 gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
          Length = 347

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 17/243 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
               S +   +  ++  LD       S +  +   ++  AIRY+LL  GK++R  L    
Sbjct: 53  FDFTSYMIGKANAVNEALD-------SAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAA 105

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       AL    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 106 CELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 165

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----- 176
            L+++AFE +++  T +      + +  L   IG +G++ GQ++D+    +D+       
Sbjct: 166 ALISFAFEHLATS-TAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEV 224

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KT  L+  A   GAI+   S  E E+LR F   +G++FQ+ DD+LD     E+
Sbjct: 225 LEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 284

Query: 234 LPK 236
           L K
Sbjct: 285 LGK 287


>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
 gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
          Length = 298

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 12/241 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L++ +  ++  LD  ++Q     ++     L SA+RY+L+ GGK++R  L     
Sbjct: 5   EFKQQLEKYADIVNEYLDRCIVQNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +    L    A+E IH YSLIHDDLP+MDN   RRG+PT H  Y E  AI+AG+G
Sbjct: 60  DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 119

Query: 123 LLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LL  AFEI+     +  D  R S+    +    G+ GM+ GQ++D++ E   +D   +  
Sbjct: 120 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + ++KTGAL+     S AI+  A  ++ ++L  F ENLG+ FQ+ DD+LD E     L K
Sbjct: 180 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGK 239

Query: 237 K 237
           K
Sbjct: 240 K 240


>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
 gi|125713574|gb|ABN52066.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
          Length = 295

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 12/241 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L++ +  ++  LD  ++Q     ++     L SA+RY+L+ GGK++R  L     
Sbjct: 2   EFKQQLEKYADIVNEYLDRCIVQNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +    L    A+E IH YSLIHDDLP+MDN   RRG+PT H  Y E  AI+AG+G
Sbjct: 57  DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 116

Query: 123 LLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LL  AFEI+     +  D  R S+    +    G+ GM+ GQ++D++ E   +D   +  
Sbjct: 117 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + ++KTGAL+     S AI+  A  ++ ++L  F ENLG+ FQ+ DD+LD E     L K
Sbjct: 177 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGK 236

Query: 237 K 237
           K
Sbjct: 237 K 237


>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 300

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 81/234 (34%), Positives = 124/234 (52%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    + L +   R++  LD       + +  +   +L  A+RY+LL GGK++R  L   
Sbjct: 8   SFDFAAYLAKEKIRVEAALD-------ASLGPERPKQLREAMRYSLLAGGKRLRPILCLA 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TAL    AIE IH  SLIHDDLPSMDN  +RRG+PT H  Y +  AI+AG
Sbjct: 61  ACELIAGESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
           + LLT AFE++S     +      +++  L+   G  G++GGQ+ D   + + +D   + 
Sbjct: 121 DALLTRAFEMVSLRSPGISAERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLE 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KTGAL+  +   GA++  A  +  + LR + E +G+ FQ+ DD+LD   
Sbjct: 181 YIHIHKTGALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTS 234


>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
 gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
          Length = 290

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 138/236 (58%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + I+  L + L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +    +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K K
Sbjct: 118 AMNIMFEYSLKNGEKA-VKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L K+
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKE 232


>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
 gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
 gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
          Length = 298

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 86/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L++ +  ++  LD  +++     ++     L SA+RY+L+ GGK++R  L     
Sbjct: 5   EFKQQLEKYADIVNEYLDRCIVKNELPEKS-----LYSAMRYSLMAGGKRLRPVLSLAVC 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +    L    A+E IH YSLIHDDLP+MDN   RRG+PT H  Y E  AI+AG+G
Sbjct: 60  DMLGGSVEQVLPFACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDG 119

Query: 123 LLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LL  AFEI+     +  D  R S+    +    G+ GM+ GQ++D++ E   +D   +  
Sbjct: 120 LLNLAFEIMLENIIKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNR 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + ++KTGAL+     S AI+  A  ++ ++L  F ENLG+ FQ+ DD+LD E     L K
Sbjct: 180 MHRLKTGALIKAPVVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGK 239

Query: 237 K 237
           K
Sbjct: 240 K 240


>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 403

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 18/244 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           + G    +   ++ I+  LD         +       +  A+RY +  GGK++R  L   
Sbjct: 109 DFGFKPYMIRKAETINRALD-------KAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLA 161

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      +A+    ++E IH  SLI DDLP MDN  +RRGKPT H  + E  AI++G
Sbjct: 162 ACELVGGGERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 221

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
             LL  AFE ++      K  +R   +  L  +IG +G++ GQ +D+  E +D       
Sbjct: 222 GALLALAFEHLTEADVSSKKMVRV--VKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLE 279

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KTGAL+  +   GA++   S+ E E++R F   +G++FQ+ DD+LD     E
Sbjct: 280 DLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSE 339

Query: 233 DLPK 236
           +L K
Sbjct: 340 ELGK 343


>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
          Length = 381

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 12/236 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +       +   +  ++  L+         +  ++  ++  ++RY+LL GGK++R  L  
Sbjct: 85  VEFDFNKYMDSKAMTVNEALN-------KAIPLRYPQKIYESMRYSLLAGGKRVRPVLCI 137

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L       A+    AIE IH  SL+HDDLP +DN  +RRGKPT H  + E TA+ A
Sbjct: 138 AACELVGGTEELAIPTACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTA 197

Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDET 175
           GN L +YAFE I+ S    +  +   +++  L    G +G++GGQM+DI  E    ID  
Sbjct: 198 GNALHSYAFEHIAVSTSKTVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQ 257

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +  I   KT  L+  +   GAI+  AS+   ER R +   +G++FQ+ DD+LD  
Sbjct: 258 TLEWIHIHKTAMLLECSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDVT 313


>gi|323705302|ref|ZP_08116877.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535204|gb|EGB24980.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 293

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 86/232 (37%), Positives = 122/232 (52%), Gaps = 10/232 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+E  + I+  L++ L        T   + L  A++Y++  GGK++R  L      L   
Sbjct: 6   LREKIEYINKGLNEFLS------LTDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGG 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+ LL Y 
Sbjct: 60  NKEDALPVACAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYG 119

Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           FE +I       K     +    +    G +GM+ GQ++D+  E   I E  +  +   K
Sbjct: 120 FEVLIQQALNSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           TGAL+  +  +GAI+  A     ++L  + E LG  FQ+ DD+LD + D  K
Sbjct: 180 TGALIKASILAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAK 231


>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
           657]
 gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
           657]
          Length = 290

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + ++  L + L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   KIKKMGEEVELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +        ++    G+ GM+GGQ++DI  +D+ I   ++  + K K
Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
 gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
          Length = 290

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + I+  L + L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +        ++    G+ GM+GGQ++DI  +D+ I   ++  + K K
Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 306

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
              P+ L      ++  LDD        +  +  ++L  A+RY+LL GGK++R  L    
Sbjct: 15  FDFPAYLAAAKASVEEALDD-------SLGPERPEQLREAMRYSLLAGGKRLRPILCIAA 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       AL    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG+
Sbjct: 68  CELAGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT +FE+++     +      +++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 128 ALLTRSFEMVALRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEF 187

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+      GA++  A  +  + LR +   +G+ FQ+ DD+LD   
Sbjct: 188 IHLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTA 240


>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
 gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
          Length = 312

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 126/234 (53%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                + L+ +  R++  LD       + M  +  + L  A+RY+LL GGK++R  L   
Sbjct: 20  TFDFANYLKLSRDRVEIALD-------ASMGPERPESLRDAMRYSLLAGGKRLRPILCLA 72

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+AG
Sbjct: 73  ACELVGGSSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAG 132

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + +L+ AFE+++     +  +   +++  L    G  G++GGQ++D++ E   +D   + 
Sbjct: 133 DAMLSRAFEMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLE 192

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KT AL+     +GA++  A+ ++ + +R +   +G+ FQ+ DD+LD   
Sbjct: 193 YIHLHKTAALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTA 246


>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter sp. Re1]
 gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter sp. Re1]
          Length = 296

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 84/237 (35%), Positives = 132/237 (55%), Gaps = 11/237 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN     +++  ++ ++  L   L +       +   +L  A+ Y+ L GGK++R  +V 
Sbjct: 1   MN-KFEGEMKYMAQVVEQELSRYLPRKD-----EFPSKLHEAMHYSTLSGGKRLRPIIVM 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           + A LF +++   +     IE IH YSLIHDDLP MDN   RRGKPT H  Y +  A++A
Sbjct: 55  KAAELFGISYEKVIPTACGIEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLA 114

Query: 120 GNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           G+ LLT+AF  I+     + +  +    ++  ++   G  GM+GGQ +DI    + +   
Sbjct: 115 GDALLTHAFATIAKNSKISGINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRD 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +F I   KTG LM  +  SGA +A AS+ + E ++CFGE LG+IFQ+ DD+LD + 
Sbjct: 175 TLFYISTHKTGCLMSVSFWSGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKG 231


>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1]
 gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus sp. MC-1]
          Length = 294

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 95/235 (40%), Positives = 131/235 (55%), Gaps = 8/235 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L   L +    +++ LD LL         +    L  A+RY+LL GGK++R  L   C 
Sbjct: 2   ELKPYLADRKYLVESALDRLLPAAD-----REPRALTGAMRYSLLIGGKRLRPILTLACC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    A+    A+EC+H YSLIHDDLP+MDN  +RRG PT H QY E TAI+AG+ 
Sbjct: 57  EAVGGALERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180
           LLT+AFE+ + P T +    R +L+  L    G  GM+GGQMLDIQ E       Q+  I
Sbjct: 117 LLTHAFELAAKPVTGVLPEARLELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNI 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KTGAL+  AC +GA +   + ++ + L+ +GE LG+ FQ+ DD+LD   D  
Sbjct: 177 HIHKTGALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTK 231


>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
           pyrophosphate synthetase [Syntrophus aciditrophicus SB]
 gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
           pyrophosphate synthetase [Syntrophus aciditrophicus SB]
          Length = 308

 Score =  245 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 86/237 (36%), Positives = 129/237 (54%), Gaps = 12/237 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L + ++E   RID  +D  L       + +    L  A+RY+L  GGK+IR  L    A
Sbjct: 12  DLNAYIKEKKLRIDEAIDRYLP-----GEEESPGELFKAMRYSLFAGGKRIRPILCLAAA 66

Query: 63  SLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                 V+    L V  A+E IH YSLIHDDLP+MDN   RRGKPT H  + +  AI+AG
Sbjct: 67  EAVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAG 126

Query: 121 NGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176
           + LLT AFE+++     T L   I  +++  +    G  GM+GGQ+ D++ E    +   
Sbjct: 127 DALLTEAFELMTRTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLDT 186

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  I   KTGA++  +  +GAI++  S+     L  +G  +G++FQ+ADD+L+ E D
Sbjct: 187 LNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGD 243


>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium
 gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium
 gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp
 gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp
 gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
 gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
 gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (Ii)
 gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (Ii)
 gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
          Length = 295

 Score =  245 bits (625), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 125/233 (53%), Gaps = 11/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   +K ++  L+       + +Q +   ++  ++RY+LL GGK++R  L    
Sbjct: 2   FDFDGYMLRKAKSVNKALE-------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAA 54

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SL+HDDLP MDN  +RRGKPT H+ + E  A++AG+
Sbjct: 55  CELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            LL++AFE +++           +++  L  +IG +G++ GQ++D+  E + E     + 
Sbjct: 115 ALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLE 174

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I   KT AL+  +   GAI+    + E  +LR F   +G++FQ+ DD+LD  
Sbjct: 175 FIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVT 227


>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410699|gb|ABP67703.1| farnesyl-diphosphate synthase [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 298

 Score =  244 bits (624), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L   L+   ++ID  LD LL +          D +  A+RY++  GGK++R  L   
Sbjct: 3   SERLTEYLKYAQEKIDKHLDSLLGKN-------SPDVIYEAMRYSVFAGGKRLRPILCLL 55

Query: 61  CASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              L +        L +  AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+
Sbjct: 56  SYELLSGKEADEKVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAIL 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQD---EFIDE 174
           AG+ LL  A E+  +   + K                G +GM+GGQ++D+ +   E  +E
Sbjct: 116 AGDALLNKAAEVCFNWILRNKAKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEE 175

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             ++ +   KT  L+  +C  GA +A A +        +G+NLG+ FQ+ DD+LD   D 
Sbjct: 176 NLLYEMHLKKTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDS 235

Query: 235 PK 236
            K
Sbjct: 236 KK 237


>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
          Length = 310

 Score =  244 bits (623), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 10/234 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    + L+ +  +++  LD         +  +  + L  ++RY+LL GGK++R  L   
Sbjct: 16  SFDFAAYLEASRLKVEAALD-------GSLGPERPESLRESMRYSLLAGGKRLRPILCLA 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A+    A+E IH  SLIHDDLP+MDN  +RRG PT H  Y E  AI+AG
Sbjct: 69  ACELAGGDSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
           + LLT AFE+++     +      +++  L+   G  G++GGQ++D   + + +D   + 
Sbjct: 129 DALLTRAFEMVALRSPGVPAEQLLKVVGELSLASGAPGLVGGQVVDLECEGKNVDLETLE 188

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KTGAL+     +GA++A A     E LR +   +G+ FQ+ DD+LD   
Sbjct: 189 YIHLHKTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDVTA 242


>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
 gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
          Length = 327

 Score =  244 bits (623), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 84/243 (34%), Positives = 131/243 (53%), Gaps = 15/243 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L S LQ     ++  LD+ L         ++ D++  A+RY+LL GGK++R  L   
Sbjct: 32  SFDLQSYLQFKGVAVNAALDEAL-------PMRYPDKIHEAMRYSLLAGGKRVRPILCIA 84

Query: 61  CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            + +        A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E TA++A
Sbjct: 85  ASEMIPGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLA 144

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176
           G+ +L+ AFE I+     +      +++  L   +G QG++ GQ++DI     E +D   
Sbjct: 145 GDAMLSLAFEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDM 204

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KTG L+  A   GAI   AS+ E  R+R + + +G++FQ+ DD+LD     ++
Sbjct: 205 LRYIHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQE 264

Query: 234 LPK 236
           L K
Sbjct: 265 LGK 267


>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
 gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
          Length = 300

 Score =  244 bits (623), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L+   + ++  LD         + T+    L  A+RY+LL GGK++R  L    
Sbjct: 9   FDFAAYLRAARESVELALD-------GSLGTERPTSLSEAMRYSLLAGGKRLRPILCLAA 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   N   A+    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y E TAI+AG+
Sbjct: 62  CELAGGNVAAAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFEI++     +      +++  L+   G  G++GGQM+D++ E   ++   +  
Sbjct: 122 ALLTRAFEIVALRSPGVSPECILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEY 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+      G ++  AS    + LR +   +G+ FQ+ DD+LD   
Sbjct: 182 IHLHKTGALLSACVICGGLIGDASDELLQALRNYARGIGLAFQIIDDILDVTA 234


>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
          Length = 383

 Score =  244 bits (623), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 15/242 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 L   +  ++  L+         +  ++ +++  A+RY+LL GGK+IR  L    
Sbjct: 89  FDFKEYLHSKAISVNEALER-------AVPLRYPEKIHEAMRYSLLAGGKRIRPILTIAA 141

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLPSMDN  +RRGK T H  + E TA++AG+
Sbjct: 142 CELVGGSEELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTAVLAGD 201

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
            LL++AFE I+ S +  +  +   +++  L   IG QG+ GGQ+ DI  E    +    +
Sbjct: 202 ALLSFAFEHIAVSTRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPSVGLETL 261

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  A  SGAI+  AS+NE ER   +   +G++FQ+ DD+LD     E+L
Sbjct: 262 EWIHIHKTAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEEL 321

Query: 235 PK 236
            K
Sbjct: 322 GK 323


>gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
          Length = 284

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 86/230 (37%), Positives = 134/230 (58%), Gaps = 12/230 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + I+  L + L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+  ++  A
Sbjct: 3   EEIELWLKEHLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKA 57

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  A  I+ 
Sbjct: 58  MPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMF 117

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMC 190
               +  +    +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K KTGAL+ 
Sbjct: 118 EYSLKNGEKA-VKACYTIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIK 176

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 SSILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 226


>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
 gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
          Length = 294

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           ++++  + I+  L + L    +     ++  +  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 7   RIKKMGEEIELWLKEYLDNKGN-----YDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 62  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +    +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K K
Sbjct: 122 AMNIMFEYSLKNGEKAL-EACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+   +  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 181 TGALIKASILAGAILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 236


>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
 gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
           Okra]
          Length = 290

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 135/236 (57%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + I+  L   L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   KIKKMGEEIELWLKGYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +        ++     + GM+GGQ++DI  +D+ I   +++ + K K
Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAEVDGMIGGQVVDILSEDKSITLDELYYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 TGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
 gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
          Length = 298

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 7/232 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
            +E    + T+++  L + A          L +A+ Y+L  GGK++R  LV         
Sbjct: 8   FKEMWSNLQTLVNRQL-EEALDQSGDCPPILKAAMSYSLSAGGKRLRPILVLLSCEACGG 66

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +  TAL    AIE +H YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ LLT A
Sbjct: 67  DQSTALPAACAIEMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDALLTRA 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMK 184
           FE++++       +  +   + L +  G  GM+GGQ+ D++ E +       +  I K K
Sbjct: 127 FELLANQIE--VKSCAAACCVDLANAAGAVGMVGGQVADLESEHLENPTLEILEAIHKRK 184

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           TG L+C A   GA +  A     + L  +G  +G+ FQ+ DDLLD   D  K
Sbjct: 185 TGRLICSALTMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGDEEK 236


>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
 gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
           Hall]
          Length = 290

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 136/236 (57%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           ++++  + I+  L + L    +     ++  +  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   RIKKMGEEIELWLKEYLDNKGN-----YDKNIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +    +   ++    G+ GM+GGQ++DI  +D+ I   +++ + K K
Sbjct: 118 AMNIMFEYSLKNGEKAL-EACYAIAKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  +  +GAI+   +  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 TGALIKASILAGAILGSDTYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|167464892|ref|ZP_02329981.1| Polyprenyl synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 303

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 10/239 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G + + LQ  +++++  L+  L      +Q +    L  ++ Y+L+ GGK+IR  LV   
Sbjct: 7   GSIQAYLQTRARQVEEALEGSLP-----VQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
              F +     + V  AIE IH YSLIHDDLP+MDN   RRGKPT H ++ E  AI+AG+
Sbjct: 62  VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 121

Query: 122 GLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
            LLT+AF  ++    Q          ++  ++   G +GM+GGQ  D+Q         ++
Sbjct: 122 ALLTHAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLEEL 181

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I   KT  L+  +  +GAI+A A + +   L  FG  +G+ FQ+ DD+LD   D  K
Sbjct: 182 EYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEAK 240


>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
          Length = 297

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 88/241 (36%), Positives = 135/241 (56%), Gaps = 11/241 (4%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
           MN   +   LQ+  +R++  L   + + A+       + +  A+ Y+L  GGK+IR  L+
Sbjct: 1   MNRAEVERFLQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLL 54

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 F       L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+
Sbjct: 55  FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114

Query: 119 AGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           AG+GLLTYAF++I+     ++    + +L+  L    G +GM+ GQ+ DI+ E   +   
Sbjct: 115 AGDGLLTYAFQVIAEANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLE 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q+  I + KTG ++ ++  +GA++A A+  +  +L  F  +LG+ FQ+ DD+LD E    
Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEE 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
 gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
          Length = 297

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 131/241 (54%), Gaps = 11/241 (4%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
           MN   +   LQ+  +R++  L   + +  +         +  A+ Y+L  GGK+IR  L+
Sbjct: 1   MNRAEVEQFLQQQKQRLEESLPHYIARLNA------PGTIKRAMSYSLEAGGKRIRPLLL 54

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 F       L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+
Sbjct: 55  FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114

Query: 119 AGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           AG+GLLTYAF++I+     ++    + +L+  L    G +GM+ GQ+ DI+ E   +   
Sbjct: 115 AGDGLLTYAFQVIAEMSDARIVPATKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLE 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q+  I + KTG ++ ++  +GA++A A   +   L  F  +LG+ FQ+ DD+LD E    
Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDDILDIEGSEE 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
          Length = 360

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 80/232 (34%), Positives = 121/232 (52%), Gaps = 11/232 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
                + E +  ++  L+       S +  +    +  ++RY+LL GGK+IR  L     
Sbjct: 68  EFKEYVLEKAISVNKALE-------SAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAAC 120

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L      TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ 
Sbjct: 121 ELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 180

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFM 179
           LL  AFE I++    +  +   +++  L   IG +G++ GQ++DI  E I   D   +  
Sbjct: 181 LLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEF 240

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I   KT AL+  +   GAI+  A   + E+LR F   +G++FQ+ DD+LD  
Sbjct: 241 IHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVT 292


>gi|295399115|ref|ZP_06809097.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978581|gb|EFG54177.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 297

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 88/241 (36%), Positives = 135/241 (56%), Gaps = 11/241 (4%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
           MN   +   LQ+  +R++  L   + + A+       + +  A+ Y+L  GGK+IR  L+
Sbjct: 1   MNRAEVERFLQQQKQRLENALPHYITRMAA------PETIKRAMSYSLEAGGKRIRPLLL 54

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 F       L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+
Sbjct: 55  FATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAIL 114

Query: 119 AGNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           AG+GLLTYAF++I+     ++    + +L+  L    G +GM+ GQ+ DI+ E   +   
Sbjct: 115 AGDGLLTYAFQVIAEADDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLE 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q+  I + KTG ++ ++  +GA++A A+  +  +L  F  +LG+ FQ+ DD+LD E    
Sbjct: 175 QLEYIHRHKTGKMLQYSVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEE 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
          Length = 319

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 129/237 (54%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   L E  + ++T L   + +       +   +L  A+ Y+L  GGK+IR  L+    
Sbjct: 5   SVEQFLNEQKQAVETALSRYIERL------EGPAKLKKAMAYSLEAGGKRIRPLLLLSTV 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+AG+G
Sbjct: 59  RALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF++I     + +  ++R +L+  L    G +GM+ GQ  D++ E   +  +++  
Sbjct: 119 LLTYAFQLIVEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + KTG ++ ++  +GA++  A   +   L  F  +LG+ FQ+ DD+LD E    K
Sbjct: 179 IHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEK 235


>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 372

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
                  +   ++ ++  LD+ +             ++  A+RYA L  GK++R  L   
Sbjct: 78  TFEFDPYMISKAESVNKALDEAI-------PVGEPLKIHEAMRYAILAAGKRVRPILCLA 130

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+    A+E IH  SLI DDLP MDN  +RRGKPT H  Y E  AI++G
Sbjct: 131 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 190

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
             LL+ AFE +++   ++        +  L  +IG +G++ GQ +DI  E +D       
Sbjct: 191 GALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 248

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KT  L+  A   GAI+   S  E E +R F   +G++FQ+ DD+LD     E
Sbjct: 249 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 308

Query: 233 DLPK 236
           +L K
Sbjct: 309 ELGK 312


>gi|322382773|ref|ZP_08056617.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153242|gb|EFX45688.1| geranyltranstransferase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 298

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 10/239 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G + + LQ  +++++  L+  L      +Q +    L  ++ Y+L+ GGK+IR  LV   
Sbjct: 2   GSIQAYLQTRARQVEEALEGSLP-----VQWEFPADLRESMLYSLMAGGKRIRPVLVLAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
              F +     + V  AIE IH YSLIHDDLP+MDN   RRGKPT H ++ E  AI+AG+
Sbjct: 57  VESFGLAPEKVMPVACAIEIIHTYSLIHDDLPAMDNDDYRRGKPTNHKKFGEAMAILAGD 116

Query: 122 GLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
            LLT+AF  ++    Q          ++  ++   G +GM+GGQ  D+Q         ++
Sbjct: 117 ALLTHAFYSVTQAARQGGFSAEQVLAVVEEISVYAGARGMVGGQAADMQGVQGITRLEEL 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I   KT  L+  +  +GAI+A A + +   L  FG  +G+ FQ+ DD+LD   D  K
Sbjct: 177 EYIHACKTSDLIICSLRAGAILAGADEKQLRALTVFGSCIGMAFQIMDDILDVAGDEAK 235


>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
           Complex With Ggpp
 gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
           Complex With Ggpp
          Length = 293

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 119/232 (51%), Gaps = 14/232 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S +   +  ++  LD       S +  +   ++  A RY+LL GGK++R  L      L 
Sbjct: 15  SYIIRKADSVNKALD-------SAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELV 67

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A     A+E IH  SLIHDDLP  DN  +RRGKPT H  Y E  A++AG+ LL+
Sbjct: 68  GGEESLAXPAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLS 127

Query: 126 YAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFM 179
           +AFE ++S   +++      + +  L   IG +G++ GQ++DI  E +D        +  
Sbjct: 128 FAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKF 187

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           I   KT AL+  +   G I+   S  E ERLR F   +G++FQ+ DD+LD  
Sbjct: 188 IHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT 239


>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
           WK1]
 gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
           WK1]
          Length = 290

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 86/231 (37%), Positives = 133/231 (57%), Gaps = 10/231 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L++  ++I+  L   +         Q    +  A+ Y+L  GGK+IR  L+      F  
Sbjct: 5   LRQYKEQIEQQLPAYIESL------QAPQTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRK 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + V  A+E IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+AG+ LLTYA
Sbjct: 59  PIDIGMSVACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYA 118

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F++++  KT +  +++ +L+  L    G +GM+GGQ+ D++ E   I   Q+  I + KT
Sbjct: 119 FQVVADDKT-ISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           G L+ ++  +GAI+  A++ +   L  F ++LG+ FQ+ DD+LD E D  K
Sbjct: 178 GKLLQYSIRAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQK 228


>gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
          Length = 290

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 137/236 (58%), Gaps = 12/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K+++  + I+  L + L    +     ++ ++  A+ Y+L  GGK+IR  L     SL+ 
Sbjct: 3   KIKKMGEEIELWLKEYLDNKGN-----YDKKIYEAMAYSLEAGGKRIRPVLFLNTYSLYK 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++  A+ + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ LL  
Sbjct: 58  EDYKKAMPIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNE 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           A  I+     +  +        ++    G+ GM+GGQ++DI  +D+ I   +++ +Q+ K
Sbjct: 118 AMNIMFEYSLKNGEKALKAC-YTIAKAAGVDGMIGGQVVDILSEDKSISLDELYYMQQKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            GAL+  +  +GAI+  A+  + E L  +G+NLG+ FQ+ DD+LD E D   L KK
Sbjct: 177 AGALIKASILAGAILGSATYTDIELLGEYGDNLGLAFQIKDDILDVEGDTTTLGKK 232


>gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
 gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
          Length = 301

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 111/242 (45%), Positives = 148/242 (61%), Gaps = 6/242 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L + +   + RI+T LD LL  +      +   RLL+A+R+  L GGK++R  LV 
Sbjct: 1   MTPDLKTHMAVQAIRIETRLDHLLGGSEFLESNKSPPRLLAAMRHGVLNGGKRLRPVLVL 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           ECA+L        L V  A+E IHCYSL+HDDLP+MDN  +RRGKPTVH  +DE T I+A
Sbjct: 61  ECAALLGRCDEGVLDVACALELIHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATGILA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
           G+ LLT AF++I          IR QL   L+   G+ GM GGQMLD+Q E  D  E ++
Sbjct: 121 GDALLTLAFDVIGQEAAHPDATIRLQLSRELSKASGVVGMAGGQMLDLQAEHCDRTEIEI 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
           +    MKTGAL+ +AC +GAI+A AS +  +RL  FG  +G+ FQ+ADDLLD     E+L
Sbjct: 181 YKFHAMKTGALLRYACRAGAILADASNDNIDRLTRFGTTIGLSFQIADDLLDVVASPEEL 240

Query: 235 PK 236
            K
Sbjct: 241 GK 242


>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 302

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 10/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            + + ++E ++ + T L   L         Q  + L  A+ Y+L+ GGK++R  LV   A
Sbjct: 7   SIEAYMKEIAEAVSTRLSSSLP-----AAWQVPETLSRAMDYSLMAGGKRLRPLLVVAAA 61

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ V  A+E +H YSLIHDDLP++DN   RRGKPT H  + E  AI+AG+G
Sbjct: 62  EALGGSRDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDG 121

Query: 123 LLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178
           LLT+AF  +  +S K  +       ++  L+   G  GM+GGQ+ D+Q E    D  Q+ 
Sbjct: 122 LLTHAFYSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLR 181

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I + KTG L+ F+  +G  +A  +  + E L  +G  LG  FQ+ DD+LD   D  K
Sbjct: 182 YIHEHKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESK 239


>gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
 gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
          Length = 293

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 86/225 (38%), Positives = 130/225 (57%), Gaps = 6/225 (2%)

Query: 16  IDTILDDLLLQTASHMQTQ--HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           I+T+ ++L      +M+ +  +N R+  A++Y+L  GGK+IR  L      L+  +    
Sbjct: 7   IETLREELNKYLYDYMEGKGSYNKRVYEAMQYSLDAGGKRIRPLLFLLTYKLYKTDCNEV 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  A++AG+GLL  A  ++ 
Sbjct: 67  MDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAVLAGDGLLNEAMSLMF 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
                 KDN   +    ++ + G  GM+GGQ +DI  E   I   Q++ +   KTGAL+ 
Sbjct: 127 RHCIGKKDNA-IRACSIISESAGADGMVGGQTVDILSENTKIPIDQLYYMHSKKTGALIK 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  S A+ A AS+ E ++L  +GE LG+ FQ+ DD+LD   D  
Sbjct: 186 GSIISAAVYAGASKAEIDKLSYYGEKLGLAFQIKDDILDLTGDTA 230


>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
 gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
          Length = 315

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 136/237 (57%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            +   L    + ++  L+ LL      +        + A+RY+LL GGK++R  L    A
Sbjct: 21  DIKQYLAAQRELVEAALEQLLPAEDGPLAAH-----IEAMRYSLLAGGKRVRPILCLAAA 75

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L V  A+ECIH YSLIHDDLP+MDN  +RRG PT H ++ E  AI+AG+G
Sbjct: 76  EAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHKKFGEAAAILAGDG 135

Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LL++AFE+++ P  +       + +L+ ++   +G +GM+GGQ+LDI+ E   ++  ++ 
Sbjct: 136 LLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEAEGRRLELDELQ 195

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            I + KTGAL+  A ++GAI   AS+ + + L  +G+  G+ FQ+ DDLL+   D  
Sbjct: 196 QIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVDDLLNVTSDTA 252


>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
           16795]
 gi|164603021|gb|EDQ96486.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
           16795]
          Length = 295

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 79/236 (33%), Positives = 130/236 (55%), Gaps = 9/236 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
                L+  S  I+ +L   + +   + +T     +  A+ Y+L  GGK++R  L  E A
Sbjct: 2   AFKEDLKTKSAYIEDLLKQYMPKEEGYQKT-----IFEAMNYSLSSGGKRLRPILTLESA 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +    +    AIE IH YSLIHDDLP+MDN   RRGKPT H  + +  A +AG+ 
Sbjct: 57  KIIGGDVKEVIPFCVAIEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGDGMATLAGDA 116

Query: 123 LLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LL YAFEI+       ++ +IR + +  +    G+ GM+GGQ++DI+ E   I++ ++  
Sbjct: 117 LLNYAFEIMLKESLGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEKEKLDF 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I   KT A++     +GAIM +A +++ + +  + +N+G+ FQ+ DD+LD   D  
Sbjct: 177 IHMNKTAAMIIGCMRAGAIMGNACEDDLQNITKYAKNIGLAFQIVDDILDIVGDEK 232


>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
          Length = 367

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 16/243 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L E + +++  LD         +  ++   +  A+RY+LL GGK++R  L    
Sbjct: 72  FDFKAYLIEKANKVNEALDQ-------AVSVKNPPMIHEAMRYSLLAGGKRVRPILCIAA 124

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-YDEVTAIIAG 120
             L       ++    A+E IH  SLIHDDLP      +RRGK     +   E  A++AG
Sbjct: 125 CELVGGEESNSVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAG 184

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQ 176
           + LL ++FE I++    +           ++ +IG +G++ GQ+ D     +++     Q
Sbjct: 185 DSLLAFSFEYIATATKNVSPAKNFSRSRRISKSIGTEGLVAGQVADFVINGENQMFGLDQ 244

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I   KT AL+  A   GAI+   +  E E+LR F   +G++FQ+ DD+LD     E+
Sbjct: 245 LEFIHIHKTAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSSEE 304

Query: 234 LPK 236
           L K
Sbjct: 305 LGK 307


>gi|15224064|ref|NP_179960.1| GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|75218930|sp|O04046|GGPP2_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 2; Short=GGPP
           synthase 2; Short=GGPS2; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 2; AltName:
           Full=Dimethylallyltranstransferase 2; AltName:
           Full=Farnesyl diphosphate synthase 2; AltName:
           Full=Farnesyltranstransferase 2; AltName:
           Full=Geranyltranstransferase 2; Flags: Precursor
 gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
 gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
 gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
          Length = 376

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
                  +   ++ ++  L++ +             ++  A+RYA L  GK++R  L   
Sbjct: 82  TFEFDPYMMSKAESVNKALEEAI-------PVGEPLKIHEAMRYAILAAGKRVRPILCLA 134

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+    A+E IH  SLI DDLP MDN  +RRGKPT H  Y E  AI++G
Sbjct: 135 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 194

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
             LL+ AFE +++   ++        +  L  +IG +G++ GQ +DI  E +D       
Sbjct: 195 GALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 252

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KT  L+  A   GAI+   S  E E +R F   +G++FQ+ DD+LD     E
Sbjct: 253 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 312

Query: 233 DLPK 236
           +L K
Sbjct: 313 ELGK 316


>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 356

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 17/245 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +   SK ++ +LD+ +      +      ++  A+RY LL GGK++R  L    
Sbjct: 58  SEFMSYMIRKSKSVNEVLDEAVPLCEPVL------KIREAMRYTLLSGGKRVRPMLCLAA 111

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L      TA+    A+E IH  SLI DDLP MD+  +RRGKPT H  + E  AI+A +
Sbjct: 112 CELVGGQESTAMPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVD 171

Query: 122 GLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID------E 174
            L+  A +  + S    +        +L +   +G +G++ GQ  D+  E          
Sbjct: 172 ALIALAIKHTVESTSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGL 231

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--- 231
             +  I   KT AL+  A   GAIM   S  E ER+R +   +G++FQ+ DD+LD     
Sbjct: 232 KHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDVTKSS 291

Query: 232 EDLPK 236
           E+L K
Sbjct: 292 EELGK 296


>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 373

 Score =  240 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 18/244 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
                  +   ++ ++  L++ +             ++  A+RYA L  GK++R  L   
Sbjct: 79  TFEFDPYMMSKAESVNKALEEAI-------PVGEPLKIHEAMRYAILAAGKRVRPILCLA 131

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+    A+E IH  SLI DDLP MDN  +RRGKPT H  Y E  AI++G
Sbjct: 132 SCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSG 191

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
             LL+ AFE +++   ++        +  L  +IG +G++ GQ +DI  E +D       
Sbjct: 192 GALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 249

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KT  L+  A   GAI+   S  E E +R F   +G++FQ+ DD+LD     E
Sbjct: 250 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 309

Query: 233 DLPK 236
           +L K
Sbjct: 310 ELGK 313


>gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88]
 gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88]
          Length = 288

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 10/231 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L      +DT L +      +     +N  +  A+ Y++ +GGK+IR  L      ++N 
Sbjct: 3   LNSYKDEVDTWLKEYFKDKGT-----YNKSVYEAMSYSVNIGGKRIRPILALITYKIYNK 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N+  AL +  AIE IH YSLIHDDLP MD+  +RRGKPT H  + +  A++AG+GLL  A
Sbjct: 58  NYKEALSIACAIEMIHTYSLIHDDLPCMDD-DLRRGKPTNHKVFGDGLAVLAGDGLLNEA 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
           F II     Q K     +    +    G++GM+GGQ++D    ++ I+  ++  I + KT
Sbjct: 117 FNIILKNGCQ-KGMTWVEAGYEIGKASGVEGMIGGQVVDVLNTNKSIEIEELDYIHEKKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            AL+  +  +GAI+  A++ +   L+ FG+ LG+ FQ+ DD+LD E D  K
Sbjct: 176 AALITASIMTGAILGEANEKDTTILKEFGKKLGLAFQIKDDILDIESDTRK 226


>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 372

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 18/244 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           N      +   ++ I+  LD+ +              +  A+RYA L GGK++R  L   
Sbjct: 78  NFDFKPYMINKAETINRALDEAI-------PLIEPLNIHKAMRYAILAGGKRVRPILCLA 130

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A++   A+E IH  SLI DDLP MDN  +RRGKPT H  + E  AI++G
Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
             LL  AFE ++      K  +R   +  L  +IG +G++ GQ +D+  E +D       
Sbjct: 191 GALLALAFEHLTEADVSSKKMVRV--VKELAKSIGTKGLVAGQAMDLSSEGLDPNDVGLE 248

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KTGAL+  +   GA++   S+ E E++R F   +G++FQ+ DD+LD     E
Sbjct: 249 DLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDILDETKSSE 308

Query: 233 DLPK 236
           +L K
Sbjct: 309 ELGK 312


>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 337

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 81/243 (33%), Positives = 132/243 (54%), Gaps = 13/243 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L   + +    I+  LD+ ++ T         ++++ A++Y+L+ GGK+IR  L   
Sbjct: 41  DFDLNQYIADKLPLIEKALDESVVSTEKE-----TEKIVEAMKYSLMAGGKRIRPVLCLA 95

Query: 61  CASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +FN  +   A+    ++E IH  SLIHDDLPSMDN  +RRGKPT H+ Y E  AI+A
Sbjct: 96  ACEMFNDGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILA 155

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           G+ LL+ +F  ++     +  +    +++ L  ++G +G+ GGQ++D++ E         
Sbjct: 156 GDALLSDSFRHVAEQTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLED 215

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EED 233
           +  I   KT  L+  A  SGAI+  AS  E +    F  N+G+ FQ+ADD+LD     E+
Sbjct: 216 LRWIHTHKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEE 275

Query: 234 LPK 236
           L K
Sbjct: 276 LGK 278


>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
           HRM2]
 gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
           HRM2]
          Length = 316

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 83/242 (34%), Positives = 128/242 (52%), Gaps = 16/242 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N    + L+     ++  L  +L       +      L  A+ ++L+ GGK++R  L   
Sbjct: 15  NFDFKAYLKARQTLVNERLGAILGSLDPRRE------LTCAMGHSLMAGGKRLRPILCLA 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                +     AL    A+E IH YSL+HDDLP+MDN  +RRG PT H  + E TAI+AG
Sbjct: 69  ACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHRAFGESTAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLK----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-- 174
           +GLLT+AF+I+S P+   K      +R +L+  ++   G+ GM+ GQMLD+  +  DE  
Sbjct: 129 DGLLTHAFQILSRPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADETV 188

Query: 175 ---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                +  I  +KTG ++  +  +GA+ A A     E L  + E +G+ FQ+ DD+LD E
Sbjct: 189 TSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIVDDILDVE 248

Query: 232 ED 233
            D
Sbjct: 249 GD 250


>gi|585326|sp|Q08291|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
          Length = 297

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 130/237 (54%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   L E  + ++T L   + +       +   +L  A+ Y+L  GGK+IR  L+    
Sbjct: 5   SVEQFLNEQKQAVETALSRYIERL------EGPAKLKKAMAYSLEAGGKRIRPLLLLSTV 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+AG+G
Sbjct: 59  RALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF++I+    + +  ++R +L+  L    G +GM+ GQ  D++ E   +  +++  
Sbjct: 119 LLTYAFQLITEIDDERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + KTG ++ ++  +GA++  A   +   L  F  +LG+ FQ+ DD+LD E    K
Sbjct: 179 IHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEK 235


>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
 gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
          Length = 289

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 14/232 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + ++  L++      S     +N  +  A++Y++ +GGK+IR  L+    +++  N+  
Sbjct: 7   KEEVNVWLNNYFENKGS-----YNKIVYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKD 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            + +  AIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLL  A  I+
Sbjct: 62  IMPMACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIM 121

Query: 132 SSPKTQLKDNIRSQLM-LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
            +    L ++IR+      ++   G++GM+GGQ++DI  E   I    +  + K KTG L
Sbjct: 122 FNY--SLNNDIRALKASKIISEASGVEGMIGGQVVDIISEGKKITIDNLKYMHKNKTGKL 179

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +     +GAI+ +A + + + L  FGE LG+ FQ+ DD+LD   D   L K+
Sbjct: 180 IKSPIIAGAILGNAPKEDIDILEEFGEKLGLAFQIKDDILDVIGDVKVLGKE 231


>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 295

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 129/236 (54%), Gaps = 9/236 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              +LQ      +  L D       +M+  +N  L+ +++Y+L  GGK++R  L      
Sbjct: 3   FREQLQHYIDLTNEHLKDYF-----NMKEGYNQTLIESMKYSLFAGGKRLRPILSLASYQ 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F  +    +     IE IH YSLIHDDLP+MDN   RRGK T H  Y+E  AI+AG+GL
Sbjct: 58  MFRDDIEEVMPYACGIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYNEGVAILAGDGL 117

Query: 124 LTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           L Y+FE++     +  D  +    +  ++++ G+ GM+GGQ++D++ E   ID+  +  I
Sbjct: 118 LNYSFELMLENAIKQNDIYKHIVAIKEISNSAGVHGMIGGQVVDLESENKIIDKEMLDYI 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KT AL+  + + GAI+A A + +   +   G NLG+ FQ+ DD+LD   D  K
Sbjct: 178 HINKTAALITTSLKVGAIIAGAQEEDIRNMEKVGLNLGLAFQIKDDILDVVGDEAK 233


>gi|284051541|ref|ZP_06381751.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca]
          Length = 239

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 11/223 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L + L +  + ++  LD       + +   + +++  ++RY+L+ GGK++R  L    
Sbjct: 24  FDLSTYLSQKKELVEAALD-------AAITVTYPEKIYESMRYSLMAGGKRLRPTLCLAT 76

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP+MDN   RRGK T H  Y +  AI+AG+
Sbjct: 77  CELLGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGD 136

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
           GLL+YAFE +++    +      Q++  L   +G  G++GGQ++DI  E    + E  + 
Sbjct: 137 GLLSYAFEFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLT 196

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            I   KTGAL+      GAI+A A++ + ERL  + +N+G+ F
Sbjct: 197 FIHTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAF 239


>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
           henselae str. Houston-1]
 gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
           henselae str. Houston-1]
          Length = 300

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 106/233 (45%), Positives = 150/233 (64%), Gaps = 3/233 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               + L +++  ++  L  LL     + +    + LL A+RY  L GGK++R FLV + 
Sbjct: 2   HEFITLLAKHAHSVEKRLATLLSDQVQNGEIARPEILLKAMRYGVLNGGKRLRPFLVIQS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +LF++    +L V +A+ECIHCYSLIHDDLP+MDN  +RRG+PTVHI +DE TAI+AGN
Sbjct: 62  CALFDIPIEYSLNVASALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGN 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
            LLT+AFEII+   ++L    R +L+ +L    GL GM+GGQMLD++ E   +    +  
Sbjct: 122 ALLTFAFEIIAHKTSELSFETRIRLITALAQASGLGGMIGGQMLDLEAEKKPQESKDITT 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q MKT  L+ FAC++GAI+ +ASQ   E+L  FG  LG+ FQL DDLLD   
Sbjct: 182 LQHMKTATLISFACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTA 234


>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
 gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
          Length = 296

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 130/236 (55%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+  L S  + + ++++  L D + +  +         +  ++ Y+L  GGK+IR  L+ 
Sbjct: 1   MHQSLSSFSELHKEKLEIHLKDYVHKLNA------PPEVKESMLYSLEAGGKRIRPMLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              + F  +    L   AAIE +H YSLIHDDLPSMDN  +RRGKPT H  + E  AI+A
Sbjct: 55  ASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAFAILA 114

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTY+F+ I+  P        +  L+  L+   G +GM+GGQ  DI+ E   +    
Sbjct: 115 GDALLTYSFQTIAETPDEFASAETKLSLIKELSKASGAEGMVGGQAADIKGEGKQLGLED 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I   KTG L+  +  SGAI+A+ASQ   + L  F  +LG+ FQ+ DD+LD E 
Sbjct: 175 LEYIHVHKTGKLLECSVVSGAILANASQETIQALSKFAYHLGLAFQIRDDILDLEG 230


>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
          Length = 382

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 15/244 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           +       +   +  ++  LD         +  +   +L  ++RY+ L GGK++R  L  
Sbjct: 86  VEFDFNKYMHAKAISVNQALDR-------AVPLRFPQKLHESMRYSILSGGKRVRPVLCI 138

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L       A+ +  AIE IH  +L+HDD+P +DN  IRRGKPT H  + E TA+IA
Sbjct: 139 AACELVGGTEELAMPIACAIEMIHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIA 198

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDET 175
           G  LL+ AFE I+   ++   N R  +++  L    G QG++GGQ LD+  E    ++  
Sbjct: 199 GVALLSVAFEHIAVSTSKTVGNDRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQ 258

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KT  L+  +   GAI+  AS++E ER+R +   +GI+FQ+ DD+LD     E
Sbjct: 259 TLQWIHAHKTAVLLESSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSE 318

Query: 233 DLPK 236
           +L K
Sbjct: 319 ELGK 322


>gi|302872147|ref|YP_003840783.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 299

 Score =  238 bits (607), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 15/240 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   +  + K ++  LD +L +       +  + +  A+RY++  GGK++R  L      
Sbjct: 6   LEEYINLSQKNVEEHLDKILKE-------KSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58

Query: 64  LFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+AG
Sbjct: 59  MVSKDKEIDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIAILAG 118

Query: 121 NGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176
           + LL  A E+ ++       +    +    L    G++GM+GGQ++DI +   D   E  
Sbjct: 119 DALLNLAAEVCLNWILNYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEEL 178

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +F +   KT  L+  +C  GA++A A  +    L  +G+NLG+ FQ+ DD+LD   D  K
Sbjct: 179 LFEMHLKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKK 238


>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
          Length = 292

 Score =  237 bits (606), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 87/234 (37%), Positives = 130/234 (55%), Gaps = 9/234 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S +Q     I+  L+++  +         N  L  A+ Y+L+ GGK++R  L+   A 
Sbjct: 2   MKSYMQRKMDLINQQLNEIYTEN-----MALNKDLAKAMNYSLMAGGKRLRPILIMAAAD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              V+    LR+  +IE IH YSLIHDDLP+MDN   RRGK T H  + E  AI+AG+ L
Sbjct: 57  ALGVDGEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT AFEII++ K  +    + +++  ++   G +GM+GGQ++D+Q E   ID   +  + 
Sbjct: 117 LTMAFEIIATDKN-VDAETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             KTGAL C A  SGAI+A A + +   L  +    G+ FQ+ DD+LD   D  
Sbjct: 176 AAKTGALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEK 229


>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
          Length = 373

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 18/244 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           +      +   ++ I+  LD+ +              +  A+RYA L GGK++R  L   
Sbjct: 78  SFDFKPYMISKAETINRALDEAI-------PLIEPLNIHKAMRYAILAGGKRVRPILCLA 130

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A++   A+E IH  SLI DDLP MDN  +RRGKPT H  + E  AI++G
Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----T 175
             LL  AFE ++      K  +R+  +  L  +IG +G++ GQ  D+  E +++      
Sbjct: 191 GALLALAFEHLTEADVSSKKMVRA--VKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLE 248

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KTG+L+  +   GA++   ++ E E++R F   +G++FQ+ DD+LD     E
Sbjct: 249 DLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSE 308

Query: 233 DLPK 236
           +L K
Sbjct: 309 ELGK 312


>gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
 gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
          Length = 289

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 16/233 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + I+  L++         + ++N  +  A++Y++ +GGK+IR  L+    S++  N+  
Sbjct: 7   KEEINVWLNNYFEN-----KGRYNKMVYDAMKYSVEVGGKRIRPILMLCTYSVYKDNYKE 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            + +  AIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLL  A  I+
Sbjct: 62  IMPMACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIM 121

Query: 132 S--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
              S    +K    S+++   +   G++GM+GGQ++DI  E   I    +  + K KTG 
Sbjct: 122 FNYSLNNDIKALKASKII---SEAAGVEGMIGGQVVDIISEGKKISIDNLRYMHKNKTGK 178

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           L+  +  +GAI+  A   +   L  FGE LG+ FQ+ DD+LD   D   L K+
Sbjct: 179 LIKSSIIAGAILGDAPNEDVNILDEFGEKLGLAFQIKDDILDVIGDEKILGKE 231


>gi|15224199|ref|NP_179454.1| GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|75266042|sp|Q9SLG2|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
           synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 4; AltName:
           Full=Dimethylallyltranstransferase 4; AltName:
           Full=Farnesyl diphosphate synthase 4; AltName:
           Full=Farnesyltranstransferase 4; AltName:
           Full=Geranyltranstransferase 4; Flags: Precursor
 gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
           synthetase/farnesyltranstransferase [Arabidopsis
           thaliana]
 gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
          Length = 372

 Score =  237 bits (606), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 18/244 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           +      +   ++ I+  LD+ +              +  A+RYA L GGK++R  L   
Sbjct: 78  SFDFKPYMISKAETINRALDEAI-------PLIEPLNIHKAMRYAILAGGKRVRPILCLA 130

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A++   A+E IH  SLI DDLP MDN  +RRGKPT H  + E  AI++G
Sbjct: 131 ACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSG 190

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----T 175
             LL  AFE ++      K  +R+  +  L  +IG +G++ GQ  D+  E +++      
Sbjct: 191 GALLALAFEHLTEADVSSKKMVRA--VKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLE 248

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KTG+L+  +   GA++   ++ E E++R F   +G++FQ+ DD+LD     E
Sbjct: 249 DLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSE 308

Query: 233 DLPK 236
           +L K
Sbjct: 309 ELGK 312


>gi|312877544|ref|ZP_07737504.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795685|gb|EFR12054.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 299

 Score =  237 bits (605), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 19/242 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   +  + K+++  L+ +L +       +  + +  A+RY++  GGK++R  L      
Sbjct: 6   LEEYINLSQKKVEEHLEKILAE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58

Query: 64  LFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+AG
Sbjct: 59  MLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAG 118

Query: 121 NGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---E 174
           + LL  A E+      +    K+ +++   L  +   G++GM+GGQ++DI +   D   E
Sbjct: 119 DALLNLAAEVCMDWILRCGCEKNLVKAAKYLFWS--SGVEGMIGGQVIDITNSGQDIKSE 176

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             +F +   KT  L+  +C  GA++A A  +    +  FG+NLG+ FQ+ DD+LD   D 
Sbjct: 177 ELLFEMHLKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIGDS 236

Query: 235 PK 236
            K
Sbjct: 237 KK 238


>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 295

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 9/235 (3%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
            + ++E     D  L   L      ++   N  ++ A+RY++  GGK++R  +     +L
Sbjct: 4   KAIMKEYQILTDKKLHHYL-----DVKEDKNKTVIDAMRYSIFAGGKRLRPIVAIATYNL 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F  N    L    A+E IH YSLIHDDLP+MD+   RRGK T H  Y E  AI+AG+ LL
Sbjct: 59  FKDNLEEVLPYACALEMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALL 118

Query: 125 TYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            YAFEI+ S  +TQ   N+  Q +  +    G+ GM+GGQ++D++ E   +D+  +  I 
Sbjct: 119 NYAFEIMISHARTQSNANVHLQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIH 178

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KT AL+  A + GAI+A A++ +   +   G+N+G+ FQ+ DD+LD   D  K
Sbjct: 179 YNKTAALIISAFKVGAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKK 233


>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 299

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 81/241 (33%), Positives = 128/241 (53%), Gaps = 15/241 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   +  + K+I+  L+ +L +       +  + +  A+RY++  GGK++R  L     
Sbjct: 5   ELEEYINLSQKKIEEHLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSY 57

Query: 63  SLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+A
Sbjct: 58  QMLSKDQEINQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILA 117

Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ET 175
           G+ LL  A E+ +        D    +    L    G++GM+GGQ++DI +   D   E 
Sbjct: 118 GDALLNLAAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEE 177

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +F +   KT  L+  +C  GA++A A  +    L  +G+NLG+ FQ+ DD+LD   D  
Sbjct: 178 LLFEMHLKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSK 237

Query: 236 K 236
           K
Sbjct: 238 K 238


>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
 gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
          Length = 287

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 86/229 (37%), Positives = 127/229 (55%), Gaps = 12/229 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
            I+  L+D      S     +N  L  +++Y++ +GGK+IR  L+    S++  N+   +
Sbjct: 7   EINKWLNDYFENKGS-----YNKILYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIM 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +  AIE IH YSLIHDDLP MDN  +RRGKPT H  + E  AI+AG+GLL  A  I+ +
Sbjct: 62  PMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIMFN 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
                 D +       ++   G +GM+GGQ++DI  E   I   ++  + K KTG L+  
Sbjct: 122 YSLT-HDKLALMASKVISEASGAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKS 180

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +  +GAI+  AS+ E E L  FG  LG+ FQ+ DD+LD   D   L K+
Sbjct: 181 SIIAGAILGGASKEEIEILDEFGSKLGLAFQIKDDILDVIGDSKILGKE 229


>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 295

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 10/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L   ++ ID  LD  L Q      +++   +  A+RY++  GGK++R  L    A     
Sbjct: 6   LAAKAETIDAALDRYLRQA-----SENPPVIHEAMRYSVFAGGKRLRPALTLAAAQAVGA 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L    AIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  A++AG+ L   A
Sbjct: 61  PERLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALA 120

Query: 128 FEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKM 183
           FE+++  +    L       ++  +    G  G++GGQ LD+      + E ++  + + 
Sbjct: 121 FEVLAGCRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVHRA 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTGAL   A  +GA++  AS  + ERL  F E+ G+ FQ+ DD+LD   
Sbjct: 181 KTGALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTG 229


>gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
           quintana str. Toulouse]
 gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
           quintana str. Toulouse]
          Length = 301

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 104/233 (44%), Positives = 151/233 (64%), Gaps = 4/233 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + L +++  ++  LD LL     + +    + L+ A+RY  L GGK++R FLV +  
Sbjct: 3   EFTTLLAKHAHSVERRLDTLLSDQVQNGEISRPEALIKAMRYGVLNGGKRLRPFLVIQSG 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF++     L V +A+EC+HCYSLIHDDLP+MDN  +RRG+PTVHI +DE TAI+AGN 
Sbjct: 63  ALFDIPAEYCLDVASALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNA 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFM 179
           LLT+AFEII+   + L    + +L+ +L  + GL GM+GGQMLD++ E   +     +  
Sbjct: 123 LLTFAFEIIAHKASTLPFETKIKLITTLAQSAGLGGMIGGQMLDLEAEKKPQDSAISILT 182

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q MKT AL+ FAC++GAI+ +AS+   E+L  FG  LG+ FQL DDLLD   
Sbjct: 183 LQHMKTAALISFACQAGAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDITA 235


>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase,  (ggppsynthetase) (ggps)
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 295

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 125/236 (52%), Gaps = 11/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   L++   +I+  +                  L  ++ Y+L  GGK++R  L  
Sbjct: 1   MNFELKKYLKDKKAKIEEFIKSYFQTF------PTPPILHDSVLYSLTAGGKRLRPILCI 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                 +      +    AIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+A
Sbjct: 55  ASYEACDG-MENIVPYATAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEGIAILA 113

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176
           G+GLLT AF I+S+     +  N   +++  ++   GL+GM+ GQ  D+  E    DE  
Sbjct: 114 GDGLLTEAFTILSNKDYANISSNTLLKVISEISKAAGLRGMVAGQAYDLISEGKEPDERV 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           V  I   KT A++  + + GAI+A AS+ + + L  +G+++G+ FQ+ DD+LD E 
Sbjct: 174 VEFIHLYKTAAMIKASVKVGAILAEASEEKIKNLEIYGQSIGLAFQIVDDILDIEG 229


>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
 gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
          Length = 326

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 89/244 (36%), Positives = 131/244 (53%), Gaps = 15/244 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  +   L++    +D  LD +     S         L  ++RY+L+ GGK++R  L  
Sbjct: 31  MN--IKDYLEQKRLAVDCFLDQV-----SPPTATPPTTLHESMRYSLMAGGKRVRPILTI 83

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A          + V  ++E IH YSLIHDDLPSMDN   RRGKPT H  Y E  AI+A
Sbjct: 84  AAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEAMAILA 143

Query: 120 GNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           G+ LLT AF++IS P+     +   + +++  L +  G  GM+GGQ+ DIQ E   ID  
Sbjct: 144 GDALLTMAFDLISRPELMKGCEPTRQVRILQELAYGSGNMGMVGGQVFDIQAENQDIDLP 203

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232
            +  I K KTG L+  A   GA+ A A+  + + +  + E++G+ FQ+ADD+L+      
Sbjct: 204 TLQNIHKHKTGMLIRAAVRMGAMAAGATDRQLDDMTGYAEDIGLAFQIADDVLNVTGTRE 263

Query: 233 DLPK 236
           +L K
Sbjct: 264 ELGK 267


>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 309

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 86/241 (35%), Positives = 135/241 (56%), Gaps = 12/241 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
                ++L +   +I+  L D  +           D ++SA++Y+L  GGK++R  L+ E
Sbjct: 11  TAKFANRLTKKGHQIEAYLTDCFV-----GPFDAPDIIVSAMKYSLFAGGKRVRPILLME 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             ++F  +   A+    AIE IH YSLIHDDLP+MDN  +RRG+PT H  Y E  AI+AG
Sbjct: 66  TCAMFGGDERVAIPFACAIEMIHTYSLIHDDLPAMDNDDLRRGEPTNHKVYGENIAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLD---IQDEFIDE 174
           + LL  A E        ++   R++ + +L+      G+ GM+GGQ  D     D+ I+E
Sbjct: 126 DALLNAAVETAVEGIETMEPAERARGIAALSLLMRAAGVNGMIGGQTGDLLAEDDDAINE 185

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            ++  I   KTGAL+  A   GA++A AS++E++ LR +G  +G+ FQ+ DD+LD E + 
Sbjct: 186 DKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQQALRNYGSAIGMAFQVVDDILDVESET 245

Query: 235 P 235
            
Sbjct: 246 A 246


>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
 gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
          Length = 297

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   L E  + ++  L   + Q          + L  A+ Y+L  GGK+IR  L+    
Sbjct: 5   EIEQFLNEQKQAVEAALSRYIAQL------HGPETLKKAMAYSLEAGGKRIRPLLLLSTI 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N    L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+AG+G
Sbjct: 59  QALGQNPSLGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDG 118

Query: 123 LLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
           LLTYAF++I+     ++  ++R QL+  L    G +GM+ GQ+ D++ E       ++  
Sbjct: 119 LLTYAFQLIAEIHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + KTG ++ ++  +GA++  A   +   L  F  +LG+ FQ+ DD+LD E    K
Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGTEEK 235


>gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510]
 gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510]
          Length = 300

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 102/234 (43%), Positives = 147/234 (62%), Gaps = 8/234 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L S + E ++ ++  +  LL  T          R+  A+RY  L GGK++R FLV +
Sbjct: 6   QSDLKSAMAEIAQAVELKIGALLPTTDLP-----EARVFEAMRYGCLNGGKRLRPFLVMQ 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            ++LF VN   A+R  AA+E +H YSL+HDDLP+MD+G +RRG+PT H Q+DE TAI+AG
Sbjct: 61  SSALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMDDGELRRGRPTCHRQFDEATAILAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
           +GLLT AFE+++ P T    NIR QL+ +L    G  GM+GGQMLD   + E  D     
Sbjct: 121 DGLLTLAFEVLADPATHEDPNIRCQLVTALAKAAGGHGMVGGQMLDLIAEHETFDLGTTT 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +Q++KTG ++ F+CE+G I+  AS  ++  LR +  +LG+ FQ+ DDLLD E 
Sbjct: 181 RLQRLKTGEMIAFSCEAGGILGKASPPQRTALRAYAHDLGLAFQIVDDLLDVEG 234


>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
 gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
          Length = 298

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 83/235 (35%), Positives = 126/235 (53%), Gaps = 5/235 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
           GL + L+E  K    +++  L++     +   + RL  ++RY+L+ GGK++R  L+   A
Sbjct: 3   GLNTMLKEIWKERQQLVEKQLVKELEK-EPPLDARLAESMRYSLMAGGKRLRPILLMAAA 61

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     L    A+E IH YSLIHDDLP+MDN   RRGK T H  + +  A++AG+ 
Sbjct: 62  DAVGAKGTDYLTTACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLAGDA 121

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLT AFE+I   +         + +  ++   G+ GM+GGQ +D++ E   I   Q+  +
Sbjct: 122 LLTLAFEVIGR-QQHTDPATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISMEQLRKM 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KTGAL   A  SGAI+A AS+ +   L  + E  G+ FQ+ DD+LD   D  
Sbjct: 181 HMGKTGALFRAALRSGAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDEA 235


>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
 gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
          Length = 296

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 10/238 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   LQ     I+  L++LL  +   + T     +  A+ Y++  GGK++R  L  
Sbjct: 1   MNS-LEQSLQHAIPLINQRLEELLSPSDEPLLT----TIHEAMLYSVRAGGKRLRPLLCL 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +    L +  AIE IH YSLIHDDLP++DN  +RRGKPT H  Y E  AI+A
Sbjct: 56  LTAGALRQDESRVLDIACAIEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LL  AFE++      L  ++  +++  +  + G  GM+GGQ++DIQ E   ID   +
Sbjct: 116 GDALLNRAFEVLCQL--PLAPDLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTM 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             I + KTG ++     S AI   A+  + E    +G N+G+ FQ+ADD+LD E D  
Sbjct: 174 RYIHENKTGRIIRSCLVSSAIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGDEA 231


>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 299

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 19/243 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   +  + K+++  L+ +L +       +  + +  A+RY++  GGK++R  L     
Sbjct: 5   ELEEYINLSQKKVEEHLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSY 57

Query: 63  SLFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+A
Sbjct: 58  QMVSKDQIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILA 117

Query: 120 GNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--- 173
           G+ LL  A E+      +    ++ I++   L      G++GM+GGQ++DI +   D   
Sbjct: 118 GDALLNLAAEVCMDWILRYGCRENLIKAAKYLFWA--SGVEGMIGGQVIDITNSGQDIKS 175

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           E  +F +   KT  L+  +C  GA++A A  +    L  +G+NLG+ FQ+ DD+LD   D
Sbjct: 176 EELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGD 235

Query: 234 LPK 236
             K
Sbjct: 236 SKK 238


>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 339

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 125/242 (51%), Gaps = 12/242 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L   L      I++ L     + +   +    D++  ++ Y+L+ GGK+IR  L   
Sbjct: 44  SFSLDEYLASKIGPIESAL-----EASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIA 98

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F  +   A+    A+E IH  SLIHDDLPSMDN  +RRGKPT H+ + E  AI+AG
Sbjct: 99  ACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAG 158

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
           + LL+ +FE ++     +       ++  L  ++G +G+ GGQ++D++ E         +
Sbjct: 159 DSLLSTSFEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDL 218

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             I   KT  L+  A  SGA++  A+  E      F  N+G+ FQ+ADD+LD     EDL
Sbjct: 219 KWIHIHKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDL 278

Query: 235 PK 236
            K
Sbjct: 279 GK 280


>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 378

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 18/244 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
                  +   ++ ++  L++ +             ++  A+RYA L  GK++R  L   
Sbjct: 84  TFEFDPYMMSKAESVNKALEEAI-------PVGEPLKIHEAMRYAILAAGKRVRPILCLA 136

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L        +    A+E IH  SLI DDLP MDN  +RRGKPT    Y E  AI++G
Sbjct: 137 SCELVGGQENATIPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSG 196

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
             LL+ AFE +++   ++        +  L  +IG +G++ GQ +DI  E +D       
Sbjct: 197 GALLSLAFEHMTTA--EISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLE 254

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KT  L+  A   GAI+   S  E E +R F   +G++FQ+ DD+LD     E
Sbjct: 255 HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSE 314

Query: 233 DLPK 236
           +L K
Sbjct: 315 ELGK 318


>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
 gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
          Length = 295

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 9/237 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L+  +   + I+   + +   + +T     ++ A+ Y+L  GGK++R  L  E  
Sbjct: 2   DFKEELKIRANYAEEIIKKYMPEEVGYQKT-----IMEAMNYSLSSGGKRLRPVLTLEAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +   A+   AAIE IH YSLIHDDLP++DN  +RRG+ T H  + E  AI+AG+ 
Sbjct: 57  RIVGGDTDNAIPFAAAIEMIHTYSLIHDDLPALDNDDLRRGRATNHKVFGEAMAILAGDA 116

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LL +A+E ++     +       +    +    G+ GM+GGQ++D+Q E   I + ++  
Sbjct: 117 LLNFAYETMLKESIGKENPERYLRATYEIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + KT A+M     +GA +  A + + E +  +   +G+ FQ+ DD+LD   D  K
Sbjct: 177 IHENKTAAMMVGCMRAGAAIGGADEKQMELITDYANKIGLAFQIVDDILDIVGDEAK 233


>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 299

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 131/242 (54%), Gaps = 19/242 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   +  + K+++  L+ +L +       +  + +  A+RY++  GGK++R  L      
Sbjct: 6   LEEYINLSQKKVEEHLEKILAE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58

Query: 64  LFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+AG
Sbjct: 59  MLSKDQEVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAG 118

Query: 121 NGLLTYAFEIISSPKTQ---LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---E 174
           + LL  A E+      +    K+ +++   L      G++GM+GGQ++DI +   D   E
Sbjct: 119 DALLNLAAEVCMDWILRYGCEKNLVKAAKYLFWA--SGVEGMIGGQVIDITNSGQDIKSE 176

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             +F +   KT  L+  +C  GA++A A  +    +  FG+NLG+ FQ+ DD+LD   D 
Sbjct: 177 ELLFEMHLKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIGDS 236

Query: 235 PK 236
            K
Sbjct: 237 KK 238


>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 294

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 91/236 (38%), Positives = 134/236 (56%), Gaps = 9/236 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            + + LQ  S+ I+  LD L+ +         +  L+ A RYALL GGK++R  L     
Sbjct: 3   DVANYLQTQSQLIEKRLDQLVSKRHGP-----HQNLIEAARYALLSGGKRLRPILALTTV 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   AL     +E IH YSLIHDDLP MDN   RRGK TVH QY E  A++ G+ 
Sbjct: 58  QTLHGDIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDF 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLTYAFE++++ K  L    + +L+  L+   G  GM+GGQ LD+  E   I+   + ++
Sbjct: 118 LLTYAFELLATDK-YLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLL 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KT AL+  + E G I+A+A++ +   +R FGEN+G+ FQ+ DD+LD      K
Sbjct: 177 HRNKTAALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAK 232


>gi|310829047|ref|YP_003961404.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
 gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
          Length = 297

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 89/236 (37%), Positives = 126/236 (53%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
               L E  K  D    +LL        T   D ++SA++Y+L  GGK++R  L+ E   
Sbjct: 4   FKETLLEKVKETDH---ELLACFDRKFDT--PDIIVSAMKYSLFAGGKRLRPILMKETCR 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +      +  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+ L
Sbjct: 59  CLGGDSADVKPLACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGENMAILAGDAL 118

Query: 124 LTYAFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L YA E  I   P    K    ++ +  L H+ G+ GM+GGQ  DI  ++E I+E +++ 
Sbjct: 119 LNYAMETAIAGIPVDPSKTFHYTRALSYLAHSSGVNGMIGGQTGDILSENEAINEEKMYY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I   KTGAL+  A   G  +A  +  E++ L  + E +G+ FQ+ DD+LD   D  
Sbjct: 179 IHAHKTGALLKAAVLCGGFVAKVTGEERDALETYSEKIGLAFQIVDDILDVTGDEK 234


>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
           Desulfobacterium sp.]
          Length = 316

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 86/237 (36%), Positives = 134/237 (56%), Gaps = 11/237 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
           +  L S   E +K I   L +++ ++ S        +L  A+ Y+L+  GK+IR  L   
Sbjct: 21  DFDLESYFAEKTKTIKNELINIINKSNSF------GQLSKAMEYSLISEGKRIRPILCIA 74

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A          L    AIE IH YSLIHDDLP++DN  +RRGKPT H  ++E TAI+AG
Sbjct: 75  AAESVGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAG 134

Query: 121 NGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQ 176
           + LLT AF+++S  +     N     +++  ++   G  GM+ GQM DI  E       +
Sbjct: 135 DALLTLAFQVLSEFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRDIASENTQILLNK 194

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +  +KTGAL+  + ESGAI+A+AS ++ ++L+ + + +G+ FQ+ADDLL+   D
Sbjct: 195 LEELHILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGD 251


>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [Clostridium sticklandii DSM 519]
 gi|308825427|emb|CBH21465.1| geranyltranstransferase [Clostridium sticklandii]
          Length = 295

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 83/243 (34%), Positives = 135/243 (55%), Gaps = 13/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN      ++ + + ++  +D+LL      +   +  +L+ +++Y++  GGK++R  L  
Sbjct: 1   MN--FKELMEFDKQIVEKYMDELL-----SINVIYEKKLIESMKYSVQAGGKRLRPILFL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   L N N    + +  AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E TAI+A
Sbjct: 54  ETIKLLNKNPFDFIEIACAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+GLL  A EI+ +  ++         +  ++   G+ GM+ GQ +DI+ E   ID   +
Sbjct: 114 GDGLLNLAHEIMIAFVSKKLTKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTM 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
             I   KTGAL+  +  + A+M+ A       L+ + + +G+ FQ+ DD+LD E    +L
Sbjct: 174 KFIHSNKTGALIEASIVAAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIEGNEAEL 233

Query: 235 PKK 237
            KK
Sbjct: 234 GKK 236


>gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 298

 Score =  235 bits (599), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 15/242 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN     +L   +K I+  L+  L              L  A+ Y+L+ GGK++R  L  
Sbjct: 1   MNREFKQELASRAKEIEDYLESCLQFE------GVPGELQQAMEYSLMAGGKRVRPVLCL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +        L   + +E IH YSL+HDDLP+MDN  +RRGKPT H ++ E  AI+A
Sbjct: 55  AWGEMTGACTKDILPFASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQ 176
           G+GLLT AF ++   KT            ++    G  GM+GGQ +D++    E ++   
Sbjct: 115 GDGLLTQAFAMM--LKTSFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESMELVD 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQN---EKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +  MKTGAL+  AC SGAI+A +      +      +G N+G+ FQ+ DD+LD   D
Sbjct: 173 LKGMHAMKTGALLRAACCSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILDVTGD 232

Query: 234 LP 235
             
Sbjct: 233 EK 234


>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
           8271]
          Length = 289

 Score =  234 bits (598), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 76/227 (33%), Positives = 122/227 (53%), Gaps = 8/227 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
            Q        +++D L +    +  + ND L  ++ Y L+ GGK++R  L    A +   
Sbjct: 2   FQNKYSYFTGLIEDFLQK----LPWKANDVLSESMAYTLMAGGKRVRPVLALAAAEIVGG 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +     +E IH YSLIHDDLP++DN   RRG+PT H  + E TA++AG+GLLTY 
Sbjct: 58  APEVVIPCACGLEMIHTYSLIHDDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYG 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F++++S    +    + +++      +G QGM+ GQ+LD   E   +  +Q+  I  +KT
Sbjct: 118 FQLLAS-DVPVPLERQIKVIRETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           GAL+  +   GAI+    + E  +L  +   LG+ FQ+ DD+LD E 
Sbjct: 177 GALLTASVRLGAILGGGLEEEIRQLSIYAAALGLAFQIKDDILDIEG 223


>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
 gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
          Length = 300

 Score =  234 bits (598), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 127/235 (54%), Gaps = 4/235 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   + ++  + +  +++    + L   + +  +  + L  A+RY+LL GGK++R  L  
Sbjct: 1   MAVAVSTEF-DFAAYLESARGQVELALEAALGPERPESLREAMRYSLLAGGKRLRPILCL 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L       AL    A+E IH  SLIHDDLP+MDN  +RRG+PT H  Y +  AI+A
Sbjct: 60  AACELAGGEVALALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILA 119

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT AFE+++     +      Q++  L+   G  G++GGQ++D++ E   +D   +
Sbjct: 120 GDALLTRAFEMVALRSPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATL 179

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGAL+     +GA++A A +   + LR +   +G+ FQ+ DD+LD   
Sbjct: 180 EYIHLHKTGALLQACVLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTA 234


>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
 gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
          Length = 294

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 129/236 (54%), Gaps = 9/236 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
              S+L++ S  I+  +   L      ++  +   L SA+ Y+   GGK++R  L+ E  
Sbjct: 2   DFISELKKKSDFIEAEIYAYLP-----LEEGYQKTLFSAMNYSYKAGGKRLRPILIMESY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L        L   AAIE IH YSLIHDDLP++DN  +RRGK T H  + E  AI+AG+G
Sbjct: 57  KLCGGKGSEYLPYAAAIEMIHTYSLIHDDLPALDNDDLRRGKKTNHKVFGEAMAILAGDG 116

Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LL YA+E+I +      D   + +   ++    G+ GM+GGQ++D++ E   ID   +  
Sbjct: 117 LLNYAYEVILNHALNSSDQPSAIKACKAIADGAGIYGMVGGQVVDVESESKEIDLACLDF 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I   KT A++    +SGA +A A  +  E+L  +G  LG+ FQ+ADD+LD E D  
Sbjct: 177 IHLNKTAAMIVACMKSGAYLAGADDDTVEKLEAYGRYLGLAFQIADDILDIEGDEK 232


>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 292

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 84/228 (36%), Positives = 131/228 (57%), Gaps = 9/228 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +   E    ++  LD L+        T    R+  A+RY+L+ GGK++R  LV     
Sbjct: 2   IEAYFAEKVPEVNRWLDRLMPPA-----TTFPPRIHEAMRYSLMAGGKRLRPILVLAAGE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F         V  A E +H YSLIHDDLP+MDN  +RRG PT H Q+DE TAI+AG+GL
Sbjct: 57  AFGGAPERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           +T+AF I++      +  +R    L++     ++GM+ GQ++D++ E   ID  ++  I 
Sbjct: 117 MTHAFRILAEMDAPAEQKVRVIRELAVGSGT-VEGMIAGQIVDLEAERKPIDAERLKFIH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + KTGAL+  A   G I+A A++++   L  +G+ +G+ FQ+ADD+LD
Sbjct: 176 RAKTGALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILD 223


>gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909]
 gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1]
 gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909]
 gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1]
          Length = 291

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 89/231 (38%), Positives = 135/231 (58%), Gaps = 10/231 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + ++ N K  + ++ DL+              L  ++ Y+L +GGK++R  L+     
Sbjct: 2   LSTYIETNKKPFEKVMFDLIESE------PIPSELKESMLYSLKVGGKRLRPILLFAVLE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            FN+       V AA+E IH YSLIHDDLP+MD+  +RRGKPT HI + E TAI+AG+ L
Sbjct: 56  SFNLAPQKGYHVAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHIVFGEATAILAGDSL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT+AF++I+  + +L  N R  L+ +L+   G  GM+ GQ+LD++ E   +   Q+  I 
Sbjct: 116 LTHAFKVIAEDE-RLTTNQRLSLIQALSLASGPMGMVAGQVLDMEAEVKAVSLEQLKQIH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KTG L+ FA  +GAI+A A      +L+ F  +LG+ FQ+ DD+LD E 
Sbjct: 175 VNKTGRLIEFAIVAGAIIAQADDEVINQLKQFAYHLGLAFQIKDDILDVEG 225


>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 299

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 15/240 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   +  + K+++  L+ +L +       +  + +  A+RY++  GGK++R  L      
Sbjct: 6   LEEYIYLSQKKVEENLEKILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58

Query: 64  LFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           + + +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+AG
Sbjct: 59  MVSKDQIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAG 118

Query: 121 NGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176
           + LL  A E+ +        D    +    L    G++GM+GGQ++DI +   D   E  
Sbjct: 119 DALLNLAAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEEL 178

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +F +   KT  L+  +C  GA++A A  +    L  +G+NLG+ FQ+ DD+LD   D  K
Sbjct: 179 LFEMHLKKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKK 238


>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
 gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
          Length = 295

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 82/241 (34%), Positives = 135/241 (56%), Gaps = 12/241 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
               +L+E S  I+  ++  L +   + +T     +  A+ Y+L  GGK++R  L+ E  
Sbjct: 2   DFKKELKERSIYIEDKIESYLPKEEGYQKT-----IFEAMNYSLRAGGKRLRPILLMEAY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L        +    A+E IH YSLIHDDLP++DN  +RRGKPT HI + E  AI+AG+ 
Sbjct: 57  KLCQGQGEDFVPYSVAMEMIHTYSLIHDDLPALDNDDLRRGKPTNHIVFGEAMAILAGDA 116

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
           LL  A+E ++++     +  I  +    ++   G+ GM+GGQ++D++ E   ID+ ++  
Sbjct: 117 LLNTAYETMLNAAFKHSRPEISLRAAYEISRGAGIYGMIGGQVVDVESEDKKIDKDKLDY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           I   KT A++  +  +GAI+A   ++  E L  + EN+G+ FQ+ DD+LD E D   L K
Sbjct: 177 IHMNKTAAMIVGSVRAGAILAGIDEDRLESLTKYAENIGLAFQIVDDILDIEGDEKLLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
 gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
          Length = 292

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 86/234 (36%), Positives = 130/234 (55%), Gaps = 10/234 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
               KL+     I++ +D  L   A+        R+  A+ Y++  GGK++R  LV    
Sbjct: 2   EFKEKLRTYQSEIESAVDQYLPAEATR-----PSRIHEAMLYSMRAGGKRLRPVLVLASK 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF+ + L A+    A+EC+H YSLIHDDLPS+D+G +RRGKPT H Q+DE TA++AG+ 
Sbjct: 57  ELFD-SELDAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDA 115

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LL YAF++++       D + + L+  L    G + ++GGQM DI  E   + E  +  I
Sbjct: 116 LLAYAFQLLARHFANAPD-VCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFI 174

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
              KT AL+      G I+  A+  + + LR +G  +GI FQ+ DD+LD   D 
Sbjct: 175 HLNKTSALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSDE 228


>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259366|gb|EDS73332.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
           17244]
          Length = 294

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            +  +L++    ++ +L    ++            +  +  Y+L  GGK+IR  L+ E  
Sbjct: 2   DIKKELKDKQSFVEDVLKKYTIKEGK------PKSIFESFNYSLFVGGKRIRPILLMESC 55

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   AL + AA+E IH YSLIHDDLP MD+  +RRGKPT H  Y E TA++AG+ 
Sbjct: 56  KCVGGDTNEALPLMAAMEMIHTYSLIHDDLPCMDDDELRRGKPTNHTVYGEATALLAGDS 115

Query: 123 LLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
           LL  A+E +       KD N   + M  +  + G++GM+ GQ++D++ E    D   +  
Sbjct: 116 LLNLAYETMLKGAKSSKDINRYVEAMNVIADSAGVKGMIAGQVMDMESEGKEPDGETLDF 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           I   KTGA++  +  SGA++  A+ +E + L  +   +G++FQ+ DD+LD   D   L K
Sbjct: 176 IHDNKTGAILRASVISGAVVGGATDDELKNLSEYARAIGLMFQVVDDILDVVSDEETLGK 235

Query: 237 K 237
           K
Sbjct: 236 K 236


>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
 gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
          Length = 287

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 13/232 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +   +++  LD+        +  QH  ++  A+RY+LL GGK++R  L      L   + 
Sbjct: 3   QKGNQVNKALDE-------AVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDE 55

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A+    A+E IH  SLIHDDLP MDN  +RRG PT H  + E TA++AG+ LL  AFE
Sbjct: 56  ELAMPTACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFE 115

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
            ++     +  +   Q +  L   +G +G++ GQ++DI+ E   +  + +  I   KT  
Sbjct: 116 HVARNTKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAK 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           L+  A   GAIM  A     ERLR +  ++G++FQ+ DD+LD     E+L K
Sbjct: 176 LLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGK 227


>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
 gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
          Length = 293

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 129/233 (55%), Gaps = 14/233 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +    R++  L + + Q   +        L  A+ Y+L+ GGK+IR  LV E   +   +
Sbjct: 11  EAAQARVEEALRERVGQMGRYAD------LREAMEYSLMAGGKRIRPVLVLESCRMCGGD 64

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL    A+E IH YSLIHDDLP+MD+  +RRG+PT H+ Y E TAI+AG+GLLT AF
Sbjct: 65  PEVALPFACAVEMIHTYSLIHDDLPAMDDDELRRGRPTNHMVYGEATAILAGDGLLTAAF 124

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTG 186
           + ++    QL        +  L+   G  GM+GGQ LD+  E    T  ++  +Q +KTG
Sbjct: 125 QTLTQA--QLTAQQVVDAVACLSLAAGPDGMVGGQALDMAGEGRSLTRAELEQLQSLKTG 182

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           AL+  A E G I A  S  ++E +R + + LG  FQ+ DD+LD     E+L K
Sbjct: 183 ALIAAAAELGCIAAGGSPEQRESVRQYAQCLGRAFQVQDDILDVTSTDEELGK 235


>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
 gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
 gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Geobacillus kaustophilus HTA426]
          Length = 297

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   L E  + ++  L   + +       +  + L  A+ Y+L  GGK+IR  L+    
Sbjct: 5   SVEQFLNEQKRAVEAALSSYMARL------RGPETLKKAMAYSLEAGGKRIRPLLLLATI 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+AG+ 
Sbjct: 59  QALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDA 118

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
           LLTYAF++I+     ++  ++R QL+  L    G +GM+ GQ  D++ E       ++  
Sbjct: 119 LLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I + KTG ++ ++  +GA++  A   +   L  F  +LG+ FQ+ DD+LD E 
Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEG 231


>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
           ATCC 824]
 gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
           acetobutylicum ATCC 824]
 gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
           EA 2018]
          Length = 289

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/226 (34%), Positives = 123/226 (54%), Gaps = 9/226 (3%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            K ++  L        +     +N R+  ++ Y+L  GGK++R  L+    +++N ++  
Sbjct: 7   KKEVEEYLSRYFEGKDN-----YNKRVYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKE 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            + + AAIE IH YSLIHDDLP MDN  +RRG+PT H  +    A++AG+GLL  A  I+
Sbjct: 62  VIDIAAAIEMIHTYSLIHDDLPCMDNDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIM 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
                   +      ++ ++      GM+GGQ++DI  E   I+E ++  + K KTG L+
Sbjct: 122 FKYCIGKGEEALKACLM-ISKAASSDGMIGGQVVDILSEGKKINEDELRYMHKKKTGELI 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             A  SGAI+  A  ++ E L  +G+ LG+ FQ+ DD+LD   D  
Sbjct: 181 KAAVVSGAILGGAPLHDVELLSQYGDKLGLAFQIEDDILDIIGDTK 226


>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
 gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
 gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
 gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
 gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
 gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
          Length = 297

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 123/233 (52%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   L E  + ++  L   + +       +  + L  A+ Y+L  GGK+IR  L+    
Sbjct: 5   SVEQFLNEQKRAVEAALSSYMARL------RGPETLKKAMAYSLEAGGKRIRPLLLLATI 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L V  AIE IH YSLIHDDLPSMDN  +RRGKPT H  + E  AI+AG+ 
Sbjct: 59  QALGKDPAIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDA 118

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
           LLTYAF++++      +   +R QL+  L    G +GM+ GQ  D++ E       ++  
Sbjct: 119 LLTYAFQLMAEIDDDRVPPPVRLQLIEQLAKAAGPEGMVAGQAADMEAEGKTLALAELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I + KTG ++ ++  +GA++  A   +   L  F  +LG+ FQ+ DD+LD E 
Sbjct: 179 IHRHKTGKMLQYSVHAGALLGGADGRQTRELNEFAAHLGLAFQIRDDILDIEG 231


>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
 gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
          Length = 289

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 84/229 (36%), Positives = 126/229 (55%), Gaps = 12/229 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
            I+  L+D      S     +N  L  +++Y++ +GGK+IR  L+    S++  N+   +
Sbjct: 9   EINKWLNDYFENKGS-----YNKVLYDSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIM 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +  AIE IH YSLIHDDLP MDN  +RRGKPT H  + E  AI+AG+GLL  A  ++ +
Sbjct: 64  PMACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNVMFN 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
                 D +       ++   G +GM+GGQ++DI  E   I   ++  + K KTG L+  
Sbjct: 124 YSLT-HDKVALMASKVISEAAGAEGMIGGQVVDIISEGQKISIDKLKYMHKNKTGQLIKS 182

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +  +GAI+  AS+   E L  FG  LG+ FQ+ DD+LD   D   L K+
Sbjct: 183 SIIAGAILGGASKENLEILDEFGSKLGLAFQIKDDILDVIGDSKVLGKE 231


>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
          Length = 299

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 19/242 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   +  + K+++  LD +L +       +  + +  A+RY++  GGK++R  L      
Sbjct: 6   LEEYINLSQKKVEKHLDGILKE-------RSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQ 58

Query: 64  LFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +F+ +       L + +AIE IH YSLIHDDLP+MDN  +RRGKPT H+ + E  AI+AG
Sbjct: 59  MFSEDKEIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIAILAG 118

Query: 121 NGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---E 174
           + LL  A E+      +    ++ I++   L      G++GM+GGQ++DI +   D   E
Sbjct: 119 DALLNLAAEVCMDWILRYGCRENLIKAAKYLFWA--SGVEGMIGGQVIDITNSGQDIKNE 176

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             +F +   KT  L+  +C  GA++A A       L  +G+NLG+ FQ+ DD+LD   D 
Sbjct: 177 ELLFEMHLKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIGDS 236

Query: 235 PK 236
            K
Sbjct: 237 KK 238


>gi|220927127|ref|YP_002502429.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
 gi|219951734|gb|ACL62126.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
          Length = 337

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 97/237 (40%), Positives = 144/237 (60%), Gaps = 7/237 (2%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
              P++L   +  ++  L++ L   A   +     RL+  +R+A+LGG K++R FL  E 
Sbjct: 35  ADFPARLTAVADAVEGFLNERLGDAAGPGEITRPVRLMQGMRHAVLGGGKRLRPFLTIET 94

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A +    +  AL  G+ IE +HCYSL+HDDLP+MDN  +RRGKPTVH  +DE TAI+ G+
Sbjct: 95  ARMLGGPYAGALAAGSGIELVHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATAILVGD 154

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDET 175
            LLT+AFEI++ P  Q    +R++L+L L    GL GM+GGQ+LD+  E       +D  
Sbjct: 155 ALLTFAFEILADPVWQPDARVRAELVLGLARAAGLGGMVGGQLLDLGAEGRFGPANLDVD 214

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               +Q MKTGAL+  + ++GAI+  A  +++  L  +G  LG  FQ+ADD+LD E 
Sbjct: 215 ATLQLQAMKTGALLAVSVDAGAIVGGADPDQRAALLAYGRALGQAFQVADDILDREA 271


>gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
          Length = 363

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 + E +  ++  LD+ ++        +   ++  A+RY+LL GGK++R  L    
Sbjct: 70  FNFKVYVAEKAICVNKALDEAIM-------VKDPPKIHEAMRYSLLAGGKRVRPMLCLAA 122

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   N   A+    A+E IH  SLIHDDLP MD+  +RRGKPT H  Y E  A++AG+
Sbjct: 123 CELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGD 182

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            LL +AFE +++  T +  +     +  L  ++G +G++ GQ+ D     +  +    + 
Sbjct: 183 ALLAFAFEYLATATTGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLE 242

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  +   GAI+   +  E ++LR F + +G++FQ+ DD+LD      +L 
Sbjct: 243 FIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELG 302

Query: 236 K 236
           K
Sbjct: 303 K 303


>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
 gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
          Length = 299

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 84/239 (35%), Positives = 125/239 (52%), Gaps = 11/239 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+    + LQ     I+  L DLL       + Q  + L  A+RYA+L GGK+IR  LV 
Sbjct: 5   MSENFNAWLQSVQSAIEKSLSDLLPS-----EKQFPEPLHQAMRYAVLDGGKRIRPLLVF 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LF        +  +A+E IH YSLIHDD+P MDN  +RRGKPT+H+Q+ E  A++A
Sbjct: 60  ATGALFGAPVAVMTQTASAVEMIHAYSLIHDDMPCMDNDVLRRGKPTLHVQFGEAMALLA 119

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
           G+ L   AF ++S      K  + ++ +  L+   G  GM GGQ   LD   + +   Q+
Sbjct: 120 GDALQAQAFIVLSKIDDDAK--LVAERLRILSEASGSLGMCGGQAIDLDSVGKNLSIDQL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + ++KTGAL+  +   GA  A      E   L  + + +G+ FQ+ DD+LD   D  
Sbjct: 178 EQMHRLKTGALLKASVMLGAFSAKRPDPEEITALDAYAKAIGLAFQVVDDILDVTADTA 236


>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
           LSv54]
 gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
           psychrophila LSv54]
          Length = 298

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 93/246 (37%), Positives = 135/246 (54%), Gaps = 17/246 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  + + L++    ++  +D  +L+ +   +     + + A+RY+L  GGK+IR  L  
Sbjct: 1   MN--IKNYLEQKRSLVEEAMDRFMLEESGPFK-----KHIEAMRYSLFAGGKRIRPILCL 53

Query: 60  ECAS---LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
             A             L V  A+ECIH YSLIHDDLP+MD+  +RRGK T H+ Y E  A
Sbjct: 54  AAADSICAQERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGA 113

Query: 117 IIAGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173
           I+AG+GLL++AF++I+      L    R  +   +    G  GM+GGQ LDIQ E   ID
Sbjct: 114 ILAGDGLLSWAFDLIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEID 173

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230
              +  I + KTGAL+  +  SGAI A A+  +   L  +G N+G+ FQ+ DDLLD    
Sbjct: 174 FDTLATIHRSKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDATAT 233

Query: 231 EEDLPK 236
            E+L K
Sbjct: 234 TEELGK 239


>gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
 gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
 gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
 gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
          Length = 293

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 12/228 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I+  L        S     +N ++  A+ Y+L  GGK+IR  L+     L+  +    L 
Sbjct: 14  IENWLGSYFKDKGS-----YNKKVYEAMEYSLGAGGKRIRPLLLLLTYMLYKDDFEKVLP 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + +A+E IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+GLL     I+   
Sbjct: 69  IASAVEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAVAVLAGDGLLNEGMSIMLKS 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
               + N   +    +  + G +GM+GGQ +DI  E   I   Q++ +   KTGA++  +
Sbjct: 129 CMNEQHNF-IKACSFIAESAGAEGMVGGQTVDILSENTKIPIDQLYYMHSKKTGAIIKAS 187

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
             +GAI+  A + + E L  +G+ LG+ FQ+ DD+LD   D   L KK
Sbjct: 188 IIAGAILGEAPKRDIENLEYYGQKLGLAFQIKDDILDIVGDTEVLGKK 235


>gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 307

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 103/237 (43%), Positives = 144/237 (60%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L + ++  + +L +LL       +     RL+ ++RY+ L GGK++R FLV E A
Sbjct: 8   DFTQRLDKTAEETEALLGELLGDAPLADEIARPQRLIESMRYSSLGGGKRLRPFLVVESA 67

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H  YD+ TAI+AG+ 
Sbjct: 68  AVFGVPRKGALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDA 127

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVF 178
           LLT AF+II+  +      +R  L  +L    G+ GM GGQ+LD+  E          V 
Sbjct: 128 LLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDSGPVDVA 187

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ F C +GA++  AS  E + L  +G  LG  FQ+ADDLLD E D  
Sbjct: 188 RVQQMKTGALLRFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGDAA 244


>gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
          Length = 303

 Score =  231 bits (590), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 89/237 (37%), Positives = 135/237 (56%), Gaps = 9/237 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            + + L      ++  LD L ++     Q      L  ++RY+LL GGK+IR  L     
Sbjct: 8   AIEAYLNRCKNAVEQFLDSLFVKE----QRTDYGTLAESMRYSLLAGGKRIRPVLAMAAI 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                + +  + + A +E IH YSLIHDDLPSMDN  +RRGKPT H+ Y + TAI+AG+ 
Sbjct: 64  EALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDNDSLRRGKPTNHVIYGDATAILAGDA 123

Query: 123 LLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LLT+AF ++S P     +   IR +++  L+   G+ GM+GGQ +DI  E   ++ + + 
Sbjct: 124 LLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGVNGMVGGQQMDIASEGKALNLSSLE 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + + KTGAL+  +   GA++  AS  + E L  +G+ +GI FQ+ADDLLD E D  
Sbjct: 184 FLHQHKTGALIRASLRIGALLGKASSPDFEHLDRYGQAVGIAFQIADDLLDVEGDAA 240


>gi|294101849|ref|YP_003553707.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
 gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
          Length = 300

 Score =  231 bits (590), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 12/244 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  +  +L++N        +D L    S        RL  ++ Y+L  GGK++R  L  
Sbjct: 2   MNDMVKRELEKNR----VWFEDHLNSLCSSRPENIPPRLWESMTYSLQAGGKRLRPILCV 57

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           + A          L +  A+E +H  SLIHDDLP+MDN  +RRGKPT H+ Y +  AI+A
Sbjct: 58  KAAESVGGEKEKVLPMALALEMVHTASLIHDDLPAMDNDSLRRGKPTNHMIYGDALAILA 117

Query: 120 GNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
           G+ LL +AFE  +       +  +   Q +      +G  G+ GGQ    D        +
Sbjct: 118 GDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQAVGPSGICGGQVLDTDPASFTSSLS 177

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            V  I   KT  L+  +  +GAI+  ASQ        +G +LG+ FQ+ DD+LD     E
Sbjct: 178 FVANIALQKTAVLLQASLVTGAILGGASQEIAGAFGKYGRHLGLAFQIVDDILDVTSSPE 237

Query: 233 DLPK 236
           +L K
Sbjct: 238 ELGK 241


>gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14]
 gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14]
          Length = 308

 Score =  231 bits (589), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 110/245 (44%), Positives = 150/245 (61%), Gaps = 10/245 (4%)

Query: 1   MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIR 54
           M  GL S     +L   +   +T+L  LL       +     RL+ A+RY+ L GGK++R
Sbjct: 1   MTSGLSSADFVKRLDTTADETETLLGTLLSDAVLPDEIARPKRLMDAMRYSSLGGGKRLR 60

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            FLV E +++F V   +AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H   D+ 
Sbjct: 61  PFLVVESSAVFGVPRDSALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTADDA 120

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--- 171
           TAI+AG+GLLT AF+II+  +      +R  L  +L    G+ GM+GGQMLD+  E    
Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHQDPAVRLLLTRALARAAGIGGMVGGQMLDLAGEGRFG 180

Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +   V  +Q+MKTGAL+ F C SGA++  ASQ + + L  +G  LG  FQ+ADDLLD 
Sbjct: 181 DREPVDVARLQQMKTGALLRFGCISGALLGQASQKDYQALDAYGRALGEAFQIADDLLDV 240

Query: 231 EEDLP 235
           E D  
Sbjct: 241 EGDAA 245


>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 295

 Score =  231 bits (589), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 129/233 (55%), Gaps = 8/233 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
            + + +Q++ + ++  +  ++      ++  ++ +++ ++ Y+LLGG K++R  L  E  
Sbjct: 2   DIKTIMQDDKEIVERHIKKIM-----DIKLGYSQKIIESMSYSLLGGGKRLRPVLFIETL 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF+++    L +   +E IH YSLIHDDLP+MDN  +RRGKPT HI Y E  AI+AG+ 
Sbjct: 57  KLFDIDFEQYLNIACVLEMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDS 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LL  ++E++     +            ++ N G+ GM+GGQ+ D+ +E   ID   +  I
Sbjct: 117 LLNLSYEVLFDFLYKNSSPNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYI 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KT  L+  +  S A ++  S+     L  +  N+G+ FQ++DD+LD   D
Sbjct: 177 HYNKTAKLIMASILSAAYISDCSKEYITYLESYAYNIGMAFQISDDILDVVGD 229


>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. SG-1]
 gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. SG-1]
          Length = 295

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 78/204 (38%), Positives = 120/204 (58%), Gaps = 4/204 (1%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            +++  A+ Y+L  GGK+IR  L+         +    L   AA+E IH YSLIHDDLPS
Sbjct: 31  PEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPS 90

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  +RRGKPT H  + E TAI+AG+GLLTY+FE+++     +      +L+  L  + 
Sbjct: 91  MDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLAG-TPDVSAEKLIRLVSLLAKSA 149

Query: 155 GLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G +GM+GGQ  D++ E   +   ++  I K KTG L+ F+  + AI+A +++ +   L  
Sbjct: 150 GPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEE 209

Query: 213 FGENLGIIFQLADDLLDCEEDLPK 236
           +  ++G+ FQ+ DD+LD E    K
Sbjct: 210 YAFHIGLAFQIQDDILDVEGSEEK 233


>gi|146337687|ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizobium sp. ORS278]
 gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
           (FPP synthase) [Bradyrhizobium sp. ORS278]
          Length = 306

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 104/237 (43%), Positives = 145/237 (61%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L + ++  + +L +LL       +     RL+ ++RY+ L GGK++R FLV E A
Sbjct: 7   DFTQRLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPFLVVESA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H  YD+ TAI+AG+ 
Sbjct: 67  AVFGVPRRGALMAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDA 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           LLT AF+II+  +      +R  L  +L    G+ GM GGQ+LD+  E      D   V 
Sbjct: 127 LLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVA 186

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ F C +GA++  AS  E + L  +G  LG  FQ+ADDLLD E D  
Sbjct: 187 RVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEGDAA 243


>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
           F0359]
 gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
           F0359]
          Length = 293

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 120/232 (51%), Gaps = 9/232 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + L+   KRIDT L +LL  +           L  A+ Y+L  GGK+IR  L     
Sbjct: 2   SFRTSLESRKKRIDTRLAELLQTSTPEFSG-----LYEAMNYSLNAGGKRIRPVLFLAVL 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L +  A+EC+H YSLIHDDLP+MDN   RRGKPT H  Y + TA++AG+G
Sbjct: 57  EAAGTDPDAFLDLACALECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDG 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLTYAFE++++        I  Q +    H  G  GM+GGQ  D+Q E        + ++
Sbjct: 117 LLTYAFELMAAQSAAPAHKIL-QAIRIFAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELM 175

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + KTG +     +  A++A       + L  +G+ LG+ FQ+ DD+LD   
Sbjct: 176 HRSKTGVIFTAIVQMAALLAGVRNETMKALTTYGDQLGLAFQITDDILDVVG 227


>gi|253990912|ref|YP_003042268.1| Geranyltranstransferase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP
           synthase [Photorhabdus asymbiotica]
          Length = 305

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 87/233 (37%), Positives = 129/233 (55%), Gaps = 10/233 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
              +L+   +R++ +L   L        T  N  L+ A+++ ALLGGK++R FLV     
Sbjct: 9   FEQQLKTYQQRVNKVLISTLSSL-----TFPNSPLVRAMQHGALLGGKRLRPFLVYAVGE 63

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F ++        AA+ECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG+ L
Sbjct: 64  MFGLSANNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAGDAL 123

Query: 124 LTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
              AFEI+S  +        R +++  L    G+ GM GGQ LD++ E   ID   +  I
Sbjct: 124 QALAFEILSKREMPDVTTANRLEMLAELATASGIAGMCGGQSLDLEAEGKHIDLQALEQI 183

Query: 181 QKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + KTGAL+  A + GA  A  S  +    L  + + +G+ FQ+ DD+LD   
Sbjct: 184 HRHKTGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQVQDDILDVIG 236


>gi|149191099|ref|ZP_01869358.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1]
 gi|148835027|gb|EDL52005.1| Geranylgeranyl pyrophosphate synthase [Vibrio shilonii AK1]
          Length = 294

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L S  Q N++++D  LD                RL+ A+RYALL GGK+ R FLV 
Sbjct: 1   MIEALKSYQQRNNEQLDAWLDHY---------PFQEQRLIEAMRYALLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +F   +       AAIECIH YSLIHDDLP+MD+  +RRG+ T HIQ+DE TAI+ 
Sbjct: 52  ATGQIFGCTNEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQATCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
           G+ L T AF I+S  +     +  R  ++  L H  G  GM  GQ LD++ E   +   +
Sbjct: 112 GDALQTLAFTILSEGELASFANEQRITMVQKLAHASGAAGMCIGQALDLEAENRNVTLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A         +L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LERIHRHKTGALIKCAVQLGALAAGDKGVQYLPQLENYADAIGLAFQVQDDILDIVGDTE 231


>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
 gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
          Length = 291

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 126/238 (52%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +    +   + I+  L D L +T        ++ L  A+ Y+L+ GGK++R  L+   A 
Sbjct: 1   MKELWRNRQELIERALRDELAKTDI-----LDNTLREAMEYSLMAGGKRLRPILLMAAAD 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +    L    A+E IH YSLIHDDLP+MDN   RRGK T H  Y +  AI+AG+ L
Sbjct: 56  AVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDGIAILAGDAL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT AF ++   +  +      +++  ++   G +GM+GGQ+LD+Q E   I   ++  + 
Sbjct: 116 LTLAFTVLLR-QKDVPAVSLLRVVDEISRAAGAEGMVGGQVLDLQAENKTISLDELRRVH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTGAL   A  SGAI+  AS+ +   L  + ++ G+ FQ+ DD+LD      D+ K
Sbjct: 175 MGKTGALFHAALRSGAILGGASEQQLTALTAYADHFGLAFQITDDILDVVGNAEDIGK 232


>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
 gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
 gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
          Length = 295

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 9/238 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+    ++ ++ +  ++  L   L +        +++ L  A+ Y+L+ GGK++R  L+ 
Sbjct: 1   MHVNFKAEWKKRADLVEEGLLRELKKV-----PAYDETLEKAMEYSLMAGGKRLRPVLLM 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +    L  G AIE IH YSLIHDDLP+MDN   RRGKPT H  + +  A++A
Sbjct: 56  AAADAVGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT AFE++   +          ++  ++   G  GM+GGQ+LD++ E   +D   +
Sbjct: 116 GDALLTLAFEVMLR-QEGAAPETLVTVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAAL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             I   KTGAL C A  SGAI+A A + E   L  + E  G+ FQ+ DD+LD   D  
Sbjct: 175 RKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEA 232


>gi|219854470|ref|YP_002471592.1| hypothetical protein CKR_1127 [Clostridium kluyveri NBRC 12016]
 gi|219568194|dbj|BAH06178.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 298

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 131/236 (55%), Gaps = 8/236 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +++   K +   LD  L +      T +N ++  ++ Y+L  GGK+IR  L      ++N
Sbjct: 7   EIKRVFKSLKEELDIYLREYMKDRGT-YNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++   + + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+ G+ LL  
Sbjct: 66  KDYSKVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNE 125

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           A  I+        +N   +    ++ + G +GM+GGQ +DI  E   I   +++ +   K
Sbjct: 126 AMSIMFRHCIGKGENA-IRACSIISESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRK 184

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGA++  +  S A+ A   + E ++L+C+GE LG+ FQ+ DD+LD   D   L KK
Sbjct: 185 TGAIIKASIVSAAVYASTGEEEIDKLKCYGEKLGLAFQIKDDILDVLGDDAVLGKK 240


>gi|313118274|sp|Q9LRR0|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
           chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
           AltName: Full=Dimethylallyltranstransferase 8; AltName:
           Full=Farnesyl diphosphate synthase 8; AltName:
           Full=Farnesyltranstransferase 8; AltName:
           Full=Geranyltranstransferase 8; Flags: Precursor
          Length = 361

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 129/244 (52%), Gaps = 16/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   ++ ++  LD       S +  +    +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKLYMIRKAESVNAALD------VSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 117

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 118 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGD 177

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L  + R  + ++ L   IG +G++ GQ++D+  E ++       
Sbjct: 178 ALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLE 237

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
           ++  I   KT AL+  A   GAIM   ++ E E+LR +   +G++FQ+ DD+LD     E
Sbjct: 238 RLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 297

Query: 233 DLPK 236
           +L K
Sbjct: 298 ELGK 301


>gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 294

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 8/220 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+  L +++ +   +        +  A+ Y+LL GGK++R  L    A + +      + 
Sbjct: 14  IEERLQNIIPEVNEYCLD-----IKKAMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVIN 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            G AIE IH YSLIHDDLP+MDN   RRGKPT H  + E  AI+AG+GLL  A+EI+ + 
Sbjct: 69  FGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMIND 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             + K   + +    +    G  GM+GGQ++D+Q E   I+  ++  + ++KTGAL+   
Sbjct: 129 AVESKSIDKMRAAGIVAKYAGSLGMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAP 188

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E+ A++  A + E E L  +  NLG+ FQ+ DD+LD E 
Sbjct: 189 VEAAAVICGADKKEFELLSGYAANLGLAFQIKDDILDIEG 228


>gi|153953855|ref|YP_001394620.1| Fps [Clostridium kluyveri DSM 555]
 gi|146346736|gb|EDK33272.1| Fps [Clostridium kluyveri DSM 555]
          Length = 293

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 131/236 (55%), Gaps = 8/236 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +++   K +   LD  L +      T +N ++  ++ Y+L  GGK+IR  L      ++N
Sbjct: 2   EIKRVFKSLKEELDIYLREYMKDRGT-YNRKIYDSMEYSLNAGGKRIRPMLFLLTYRMYN 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            ++   + + AAIE IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+ G+ LL  
Sbjct: 61  KDYSKVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEAIAILGGDALLNE 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           A  I+        +N   +    ++ + G +GM+GGQ +DI  E   I   +++ +   K
Sbjct: 121 AMSIMFRHCIGKGENA-IRACSIISESAGAEGMIGGQTVDILSENVKISVDKLYYMHSRK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGA++  +  S A+ A   + E ++L+C+GE LG+ FQ+ DD+LD   D   L KK
Sbjct: 180 TGAIIKASIVSAAVYASTGEEEIDKLKCYGEKLGLAFQIKDDILDVLGDDAVLGKK 235


>gi|187735758|ref|YP_001877870.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 297

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 9/236 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   + E    ID  LD LL       + +  + +  A+RY++  GGK++R  L    A
Sbjct: 5   SLNDYITEQCALIDAALDRLLP-----AEDESPETIHKAMRYSIFAGGKRMRPVLCLAAA 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                  + AL    A+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ 
Sbjct: 60  EACGGLAVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDA 119

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLT AF +I+      +  +R   +  L    G   ++GGQ+LD++ E   + E +V  +
Sbjct: 120 LLTEAFAVIAQVDDTERYTVR-DYVRELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTV 178

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KT AL+  A   G + A+A++++ E L  FG NLG+ FQ+ DD+LD      K
Sbjct: 179 YEGKTAALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEK 234


>gi|282889795|ref|ZP_06298334.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500369|gb|EFB42649.1| hypothetical protein pah_c004o183 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 305

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 89/235 (37%), Positives = 127/235 (54%), Gaps = 9/235 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
           L    Q   + I+  L+ L  +  SHM  Q    L  A RY+LLGG K+IR  L      
Sbjct: 14  LEEFQQAALQHIEACLEKLFPE--SHMPYQS---LFDAARYSLLGGGKRIRPLLSLAVTQ 68

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A++   A+E IH YSL+HDDLPSMDN   RRGKP++H  + E  AI+ G+ L
Sbjct: 69  ALTGTFTQAIQPACALELIHTYSLVHDDLPSMDNDDFRRGKPSLHKVFPEGHAILTGDFL 128

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
           LTYAFE++ S    L      +L+  L  + G  GM+ GQ++DI   ++ +    +  I 
Sbjct: 129 LTYAFEVLCSS-PGLTAQQIVELVALLAKSAGGHGMIAGQIMDISAVNQTLTLDNLQHIH 187

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KTGAL+  A E GAI++  +  E+  L+ FG  +G+ FQ+ DD+LD      K
Sbjct: 188 QTKTGALITCAVEFGAIVSGCAPVERALLQQFGNEIGLAFQIIDDVLDITSSHAK 242


>gi|257467862|ref|ZP_05631958.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317062151|ref|ZP_07926636.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|313687827|gb|EFS24662.1| dimethylallyltransferase [Fusobacterium ulcerans ATCC 49185]
          Length = 295

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 81/233 (34%), Positives = 122/233 (52%), Gaps = 9/233 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
             + L  N K I++ +D  L +        + + +   ++YA+L GGK++R  L+     
Sbjct: 3   FKNYLDSNKKLIESSMDTYLSELN------YPEVIAEGMKYAVLNGGKRLRPILLFMILD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +        +   AAIE IH YSL+HDDLP++DN   RRGK T H ++ E   I+ G+ L
Sbjct: 57  ILGCEKENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT+AF I++     L      +++   +   G+ GM+GGQM+DI  E   ID   +  I 
Sbjct: 117 LTHAFYILTDKNKHLPAEKVIEIVRLTSSYAGINGMIGGQMIDIASEGKKIDLETLKYIH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             KTG LM    E   I+  A + EKE L  F + +G+ FQ+ DD+LD E D 
Sbjct: 177 SNKTGKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDF 229


>gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Persephonella marina EX-H1]
 gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Persephonella marina EX-H1]
          Length = 290

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 4/206 (1%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIH 89
            +   ++L  A+ Y+L  GGK++R  LV E A      +    + +  A E IH YSLIH
Sbjct: 23  PSGIPEKLFDAMAYSLSAGGKRLRPILVLESAKAVGMEDIKDIVDIAVATEFIHTYSLIH 82

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MD+  +RRGKPT HI Y E  AI+AG+GL +YAFE+IS  +T   D +  +++  
Sbjct: 83  DDLPAMDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAFELISKNRTVPPDKLL-KVINI 141

Query: 150 LTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           L+H  G+ GM+GGQ  DI  E       +  I   KT   +   C+ G ++A A++ E+ 
Sbjct: 142 LSHGTGIYGMVGGQAADILHEKENSFNDINFIHTHKTAKFIQSCCQMGGVLADATEEEEI 201

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDL 234
            L+ +G  +G+ FQ+ DD+LD   D 
Sbjct: 202 SLKNYGLYIGLAFQIQDDILDEIGDE 227


>gi|319404799|emb|CBI78400.1| geranyltranstransferase [Bartonella rochalimae ATCC BAA-1498]
          Length = 300

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 106/233 (45%), Positives = 156/233 (66%), Gaps = 3/233 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               + L ++++ ++  LD LL   A + +    + L++A+R+  L GGK++R FLV + 
Sbjct: 2   HEFTTLLAKHAQNVEKRLDILLSHKAQNDEITRPEILINAMRHGVLNGGKRLRPFLVIQS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF+++   +L +G A+ECIHCYSLIHDDLP++DN  +RRG+PTVHI +DE TAI+AGN
Sbjct: 62  AALFDISPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEGTAILAGN 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
            LLT+AFEII+          R +L+ +LT   GL GM+GGQMLD++ E    +E+    
Sbjct: 122 ALLTFAFEIIAHKACSFSSKTRIELITALTQAAGLGGMIGGQMLDLEAEKKPQNESATIT 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q+MKT AL+ FAC++GAIM  AS+    +L  FG ++G+ FQL DDLLD   
Sbjct: 182 LQQMKTAALIRFACQAGAIMGRASKTLTHKLASFGTHIGLAFQLTDDLLDLTS 234


>gi|253583347|ref|ZP_04860545.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
 gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
          Length = 295

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 124/233 (53%), Gaps = 9/233 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
             + L  + K I++ LD  L +        + + +   ++YA+L GGK++R  L+     
Sbjct: 3   FKNYLDNSKKLIESNLDIYLNELN------YPEVIAEGMKYAVLNGGKRLRPILLFMVLD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + + +    +   AAIE IH YSL+HDDLP++DN   RRGK T H ++ E   I+ G+ L
Sbjct: 57  ILDCDKEKGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT+AF I++     L      +++   +   G+ GM+GGQM+DI  E   ID   +  + 
Sbjct: 117 LTHAFYILTEKNKHLPAEKIVEIVRLTSSYAGINGMIGGQMVDIASEGKKIDLETLKYMH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             KTG LM    E   I+  A + E+E L  F E +G+ FQ+ DD+LD E D 
Sbjct: 177 SNKTGKLMKLPVELACIIGDADREEREVLVKFSELIGLAFQIKDDILDIEGDF 229


>gi|269962343|ref|ZP_06176693.1| geranyltranstransferase [Vibrio harveyi 1DA3]
 gi|269832839|gb|EEZ86948.1| geranyltranstransferase [Vibrio harveyi 1DA3]
          Length = 294

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N+++++  L+ L               L+ A++Y  LLGGK++R FLV 
Sbjct: 1   MQETLTSYQQRNNQQLNLWLEQL---------PHQEQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++  +     ++ R +++ +L    G  GM  GQ LD   ++  +    
Sbjct: 112 GDALQTLAFTILAEGELNPNAESQRIKMVQALAQASGASGMCLGQALDLGAENRRVSLAD 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEIHRNKTGALINCAVKLGALAAGEKGLEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231


>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 332

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 84/243 (34%), Positives = 133/243 (54%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +   L S L+  +K ++  LD         +  Q+ +++  A+RY+LL GGK++R  L  
Sbjct: 37  LEFDLDSYLRAKAKAVNVALD-------KAVPMQYPEKIREAMRYSLLAGGKRVRPALCI 89

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   N   A+    A+E +H  SLIHDDLP MD+  +RRGKPT H  + E TA++A
Sbjct: 90  AACELVGGNEDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLA 149

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           G+ LL YAFE I+   T +  +   +++  L   +G +G++ GQ++DI  E    +    
Sbjct: 150 GDALLAYAFEHIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEI 209

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  +   KT  L+  A  SGAI+  AS++E  RL  +  N+G++FQ+ DD+LD      +
Sbjct: 210 LEYVHTHKTAVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDVTKSSAE 269

Query: 234 LPK 236
           L K
Sbjct: 270 LGK 272


>gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
           27560]
 gi|149735562|gb|EDM51448.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
           27560]
          Length = 296

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 87/243 (35%), Positives = 130/243 (53%), Gaps = 13/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN    ++L+E +  ++ I+ D   +            ++ A+ Y+L  GGK++R  LV 
Sbjct: 1   MN-NFDTELKERTAYVEKIVYDYCPKEEG-----LQKIIIEAMNYSLKAGGKRLRPMLVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   LF  +   A    AA+E IH YSL+HDDLP+MDN   RRGK T H  Y E   I+A
Sbjct: 55  ETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAMDNDMYRRGKKTTHAVYGEDIGILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLL  A+E +S    + K   R+ L +++  +  G+ GM+GGQ +D+ +E    D   
Sbjct: 115 GDGLLNMAYETMSMAILKSKYPQRAALAMNILAYKAGIYGMIGGQTVDVINENKEKDIDT 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I K+KT AL+  A   GAI+A   +   E +     N+GI FQ+ DD+LD      +
Sbjct: 175 INFIHKLKTAALIEGAMMVGAILAGVDEQAVETVEEIATNVGIAFQIQDDILDVTGTLEE 234

Query: 234 LPK 236
           L K
Sbjct: 235 LGK 237


>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
          Length = 363

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 14/241 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 + E +  ++  LD+ ++     M       +  A+RY+LL GGK++R  L    
Sbjct: 70  FDFKVYVAEKAICVNRALDEAIMVKDPPM-------IHEAMRYSLLAGGKRVRPMLCFAA 122

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   N   A+    A+E IH  SLIHDDLP MD+  +RRGKPT H  Y E  A++AG+
Sbjct: 123 CELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGD 182

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            LL +AFE +++    +  +     +  L  ++G +G++ GQ+ D     +  +    + 
Sbjct: 183 ALLAFAFEYLATATIGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLE 242

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  +   GAI+   +  E ++LR F   +G++FQ+ DD+LD      +L 
Sbjct: 243 FIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELG 302

Query: 236 K 236
           K
Sbjct: 303 K 303


>gi|126173596|ref|YP_001049745.1| polyprenyl synthetase [Shewanella baltica OS155]
 gi|125996801|gb|ABN60876.1| farnesyl-diphosphate synthase [Shewanella baltica OS155]
          Length = 293

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 132/238 (55%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE  +R+D  L   L             +L +A+ Y ALLGGK+IR FLV     
Sbjct: 2   LVSAIQEYQQRVDNQLKQRLSTLE-----HTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++     +       ++  L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A +++   +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234


>gi|152999876|ref|YP_001365557.1| polyprenyl synthetase [Shewanella baltica OS185]
 gi|160874501|ref|YP_001553817.1| polyprenyl synthetase [Shewanella baltica OS195]
 gi|217974160|ref|YP_002358911.1| polyprenyl synthetase [Shewanella baltica OS223]
 gi|151364494|gb|ABS07494.1| Polyprenyl synthetase [Shewanella baltica OS185]
 gi|160860023|gb|ABX48557.1| Polyprenyl synthetase [Shewanella baltica OS195]
 gi|217499295|gb|ACK47488.1| Polyprenyl synthetase [Shewanella baltica OS223]
 gi|315266739|gb|ADT93592.1| Polyprenyl synthetase [Shewanella baltica OS678]
          Length = 293

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 95/238 (39%), Positives = 131/238 (55%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE  +R+D  L                 +L +A+ Y ALLGGK+IR FLV     
Sbjct: 2   LVSAIQEYQQRVDNQLKQRFSTLE-----DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++     +       ++  L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A +++   +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234


>gi|304409467|ref|ZP_07391087.1| Polyprenyl synthetase [Shewanella baltica OS183]
 gi|307303825|ref|ZP_07583578.1| Polyprenyl synthetase [Shewanella baltica BA175]
 gi|304351985|gb|EFM16383.1| Polyprenyl synthetase [Shewanella baltica OS183]
 gi|306912723|gb|EFN43146.1| Polyprenyl synthetase [Shewanella baltica BA175]
          Length = 293

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 95/238 (39%), Positives = 131/238 (55%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE  +R+D  L                 +L +A+ Y ALLGGK+IR FLV     
Sbjct: 2   LVSAIQEFQQRVDNQLKQRFSTLE-----DTAPQLKAAMTYGALLGGKRIRPFLVYSVGR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVELEKLDACAAAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++     +       ++  L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRVLAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A +++   +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYAAMMDFARAVGLAFQVQDDILDIVATTEELGK 234


>gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
 gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
          Length = 305

 Score =  228 bits (582), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 9/242 (3%)

Query: 1   MNGGLPSKLQ-ENSKRIDTI-LDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSF 56
           MN  L  K++  N    + I L  L  +   ++ +   N  L  ++RY++  GGK+IR  
Sbjct: 1   MNNYLKKKMRISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPL 60

Query: 57  LVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           LV   A         +  +V  ++E +H YSLIHDDLP MDN  +RRGKPT H ++ +  
Sbjct: 61  LVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAI 120

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173
           A++AG+GLLT +FE +S   T + ++ + +L+  L    G QGM+ GQ  DI  E    +
Sbjct: 121 AVLAGDGLLTTSFEWLS--LTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYN 178

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             ++  +   KTGAL+ +AC +G I++ AS N+ E LR +GEN G+ FQ+ DDLLD   D
Sbjct: 179 LEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGD 238

Query: 234 LP 235
             
Sbjct: 239 AK 240


>gi|37527745|ref|NP_931090.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
           synthase) [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|36787181|emb|CAE16258.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
           synthase) [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 305

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 7/244 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+    ++ +E  K     ++++L+ T S +   +N  + +     LLGGK++R FLV  
Sbjct: 1   MSEQNSTQFKEQLKICQQRVNNVLISTLSSVAFANNPLVHAMQHGTLLGGKRLRPFLVYA 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F ++        AA+ECIH +SLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG
Sbjct: 61  VGEMFGLSANNLDAPAAAVECIHAFSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAILAG 120

Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           + L   AFEI+S      +    R +++  L    G+ GM GGQ LD+  E   ID   +
Sbjct: 121 DALQALAFEILSKREMPDVTTADRLEMVAELATASGIAGMCGGQALDLAAEGRHIDLHML 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
             I + KTGAL+  A   GA  A  S  +    L  + + +G+ FQ+ DD+LD   D   
Sbjct: 181 EQIHRHKTGALIRCAVRMGAYGAGQSGHDALPELDQYAQAIGLAFQVQDDILDVIGDTEM 240

Query: 234 LPKK 237
           + K+
Sbjct: 241 IGKR 244


>gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713]
          Length = 305

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 9/242 (3%)

Query: 1   MNGGLPSKLQ-ENSKRIDTI-LDDLLLQTASHMQT-QHNDRLLSAIRYAL-LGGKKIRSF 56
           MN  L  K++  N    + I L  L  +   ++ +   N  L  ++RY++  GGK+IR  
Sbjct: 1   MNNYLKKKMRISNLTEFEKISLPKLENEMDLYLNSLNSNQILKESMRYSVDAGGKRIRPL 60

Query: 57  LVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           LV   A         +  +V  ++E +H YSLIHDDLP MDN  +RRGKPT H ++ +  
Sbjct: 61  LVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEMDNDELRRGKPTNHKKFGQAI 120

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173
           A++AG+GLLT +FE +S   T + ++ + +L+  L    G QGM+ GQ  DI  E    +
Sbjct: 121 AVLAGDGLLTTSFEWLS--LTDIDNDKKIKLISQLALAAGPQGMVSGQTDDILGESKKYN 178

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             ++  +   KTGAL+ +AC +G I++ AS N+ E LR +GEN G+ FQ+ DDLLD   D
Sbjct: 179 LEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGENFGLAFQIYDDLLDVIGD 238

Query: 234 LP 235
             
Sbjct: 239 AK 240


>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
 gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
          Length = 302

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+  L   L+E   ++D  LD+   +            L+ A+RY+L  GGK++R  L  
Sbjct: 5   MDFDLKVYLEEKRVQVDAALDEYFPKGDG-----LTTALIKAMRYSLFAGGKRLRPILCI 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A          L V  A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 60  AGAEAVGGVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLA 119

Query: 120 GNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
           G+GLLT AF +++SPK    ++     +++  +    G +GM+GGQ++D   + +  +  
Sbjct: 120 GDGLLTEAFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEFE 179

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            V  +   KTGA++  +  SGAI A A ++  +    +G  +G+ FQ++DD+LD E D  
Sbjct: 180 TVKFLHTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGDSE 239


>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
           Ice1]
 gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
           Ice1]
          Length = 296

 Score =  228 bits (582), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 131/238 (55%), Gaps = 10/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L ++L++ + +ID  L   +       +      +  A+RY+L  GGK++R  LV    
Sbjct: 2   DLKAELKQLNMKIDAALSRYMP-----AEDVAPPVIHKAMRYSLFAGGKRLRPVLVLAGC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +  + +    A+E IH YSLIHDDLP+MD+  +RRG PT H+ + E TAI+AG+G
Sbjct: 57  RAVGGDEESVMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDG 116

Query: 123 LLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LLT AF +++    +      +  Q++  L    G  GM+GGQ++D++ E   ID   + 
Sbjct: 117 LLTRAFGVLAEEGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVATMA 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I   KTGAL+  +   GA++   S  + E L  +G++LG+ FQ+ DDLLD + D  K
Sbjct: 177 YIHAHKTGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEK 234


>gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 305

 Score =  228 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 104/232 (44%), Positives = 140/232 (60%), Gaps = 4/232 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
           S L++   RI   +D     T   +      RL  A+RY A+ GGK++R  LVT  ASLF
Sbjct: 12  SLLKDALVRIQQEVDACFDATLP-VPEDPRARLYEAMRYSAIGGGKRLRPLLVTAVASLF 70

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V+   A+RVG A+E IH YSLIHDD+P MDN  +R GKPTVH+ YD+ TA++AG+ L  
Sbjct: 71  GVDRSVAVRVGTALESIHVYSLIHDDMPCMDNDSLRHGKPTVHLAYDDATAVLAGDALQA 130

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKM 183
            AFEI+S P       +R +L+ +L H  G+ GM+GGQM+DI  E    D   V  +Q++
Sbjct: 131 LAFEILSDPDLVGDPFVRIELVRTLAHASGINGMVGGQMMDIAAETASFDLATVTRLQQL 190

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KTGAL+  A E GAI+ H     +  LR +  N+G+ FQ+ DDLLD E D  
Sbjct: 191 KTGALLAAAVEMGAILGHVPPEGRTHLRGYARNIGLAFQIVDDLLDAEGDEE 242


>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
           WA1]
 gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
           WA1]
          Length = 296

 Score =  228 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 84/243 (34%), Positives = 144/243 (59%), Gaps = 15/243 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   +    + I+  +D++  ++   ++    +  +  ++Y L  GGK++R  L  
Sbjct: 1   MN--LKEYMNIRLEEINKTIDNVFDKSDIELE----NSFIEMLKYPLDAGGKRLRPILTC 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LFN ++  ++    A+E IH YSL+HDDLP+MDN  +RRGKPT H++Y E  AI+ 
Sbjct: 55  LACELFNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILV 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+GLLT+AF+++S  KT +KD+   +L+  L++  G+ GM+ GQ +D   +++ I+   +
Sbjct: 115 GDGLLTHAFQLLS--KTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDML 172

Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
            ++   KTGA++  A   GAI + + + N+ E +  +GE +G+ FQ+ DD+LD   D   
Sbjct: 173 KILHAKKTGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNET 232

Query: 234 LPK 236
           L K
Sbjct: 233 LGK 235


>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
 gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
          Length = 297

 Score =  228 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 11/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L + L+E    +D  LD  L +       +    L  ++RY++  GGK+IR  L+    
Sbjct: 2   DLKAYLKERCTLVDEALDRFLPKAD-----ELPFSLHKSMRYSVFAGGKRIRPILMLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+    A+E IH YSLIHDDLP+MD+   RRG PT H  + E  AI+AG+ 
Sbjct: 57  DAVGGDISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDA 116

Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           LLT AF ++S   P   L      +++  ++H  G  GM+GGQ++D++ E    +D   V
Sbjct: 117 LLTEAFILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGAL+  + ++GAI+  A +     L  +GE +G+ FQ+ADD+LD E 
Sbjct: 177 QYIHTHKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIEG 231


>gi|254228604|ref|ZP_04922028.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
 gi|262395026|ref|YP_003286880.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           Ex25]
 gi|151938783|gb|EDN57617.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
 gi|262338620|gb|ACY52415.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           Ex25]
          Length = 294

 Score =  228 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 127/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N+++++  LD L               L+ A++Y  LLGGK++R FLV 
Sbjct: 1   MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AAIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF II+  +     +  R  ++ +L H+ G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTIIADGQLNPAAETQRINMIKALAHSSGANGMCVGQALDLGAENRQVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231


>gi|319406284|emb|CBI79921.1| geranyltranstransferase [Bartonella sp. AR 15-3]
          Length = 300

 Score =  228 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 105/233 (45%), Positives = 151/233 (64%), Gaps = 3/233 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               + L +++  ++  LD LL   A + +    + L++A+RY  L GGK+ R FLV + 
Sbjct: 2   HEFTTLLAKHAHNVEKRLDILLSHKAQNGEISRPEILINAMRYGVLNGGKRFRPFLVIQS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF++    +L +G A+EC+HCYSLIHDDLP++DN  +RRGKPTVH  +DE TAI+AGN
Sbjct: 62  AALFDIPPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHTAFDEGTAILAGN 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
            LLT+AFEII+          +  L+ +LT   GL GM+GGQMLD++ E    +E+    
Sbjct: 122 ALLTFAFEIIAHKACSFSSKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQNESATIT 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q+MKT AL+ FAC++GAIM  AS+   ++L  FG  +G+ FQL DDLLD   
Sbjct: 182 LQQMKTAALIRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLTS 234


>gi|58617311|ref|YP_196510.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
           Gardel]
 gi|58416923|emb|CAI28036.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
           Gardel]
          Length = 276

 Score =  227 bits (580), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 93/237 (39%), Positives = 133/237 (56%), Gaps = 9/237 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  +   ++  S+     L ++L +        H+D LL++++Y+L   GK IR FLV 
Sbjct: 1   MSYNISYLMENYSRLFTKELYNILPKAD------HDDILLASMKYSLFTPGKYIRPFLVN 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +FNVN    L V  AIE IH YSLIHDDLP MDN   RRG+ + H ++ E  AI+ 
Sbjct: 55  ASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTRRGQLSSHKKFTEAIAILT 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LLT AFE++S+        IR +++  LT  IG QGM+ GQ+LD +    D   +  
Sbjct: 115 GDALLTLAFEVLSTINE--SPYIRCRIIQVLTQAIGYQGMIKGQVLDTETIAKDINDIKT 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +KT  L   ACE G I+  AS  E   L+ +G NLG  FQ+ DD+ D  +D+ K
Sbjct: 173 MHTLKTACLFSAACEVGGILGGASDTELNSLKNYGLNLGFAFQIKDDIADICKDISK 229


>gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
 gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
 gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
 gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
          Length = 290

 Score =  227 bits (580), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 15/232 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + +D  L     +       ++N  L  ++ Y++ +GGK+IR  L+     ++  ++  
Sbjct: 7   KEEVDQSLKAYFNK-----DREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKK 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L    AIE IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +I+
Sbjct: 62  ILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKIL 121

Query: 132 SSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187
                +  K  +++  ++      G  GM+GGQ++DI +E    I   ++  +   KTG 
Sbjct: 122 VDYSLEEGKSALKATKII--ADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +  SGA++A AS+ + ++L  FG  LG+ FQ+ DD+LD      DL K
Sbjct: 180 LIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231


>gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
 gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
          Length = 321

 Score =  227 bits (580), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 105/237 (44%), Positives = 142/237 (59%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L   ++  + +L  LL       +     RL+ AIRYA L GGK++R FL  E A
Sbjct: 22  DFAKRLDTTAEDTEALLGRLLSDDLLPDEITRPRRLMEAIRYATLGGGKRLRPFLAVESA 81

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F V   +AL VGAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H  YD+ TAI+AG+ 
Sbjct: 82  AVFGVERASALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDA 141

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           LLT+AF+II+  +      +R  L   L    GL GM+GGQ+LD+  E      +   V 
Sbjct: 142 LLTFAFDIITRDEVHRDPQVRLDLNRVLARCAGLGGMVGGQILDLAGEGRFGDREPVDVA 201

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ + C +GAI+  A       L  +G  LG  FQ+ADDLLD E D  
Sbjct: 202 RLQQMKTGALLRYGCVAGAILGEAPPEHYRALDDYGRALGEAFQIADDLLDVEGDAA 258


>gi|319407760|emb|CBI81407.1| geranyltranstransferase [Bartonella sp. 1-1C]
          Length = 300

 Score =  227 bits (580), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 104/233 (44%), Positives = 154/233 (66%), Gaps = 3/233 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               + L ++++ ++  LD LL   A + +    + L++A+R+  L GGK++R FLV + 
Sbjct: 2   HEFTTLLAKHAQNVEKRLDMLLSHKAQNDEIIRPEMLINAMRHGVLNGGKRLRPFLVIQS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF++    +L +G A+ECIHCYSLIHDDLP++DN  +RRG+PTVHI +DE TAI+AGN
Sbjct: 62  AALFDIPPEDSLDIGVALECIHCYSLIHDDLPALDNDTLRRGQPTVHIAFDEATAILAGN 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
            LLT+AFEII+          + +L+ +LT   GL GM+GGQ+LD++ E    +E     
Sbjct: 122 ALLTFAFEIIAHKTCSFSPKTKIELITALTQAAGLGGMIGGQLLDLEAEKKPHNENATTT 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q+MKT AL+ FAC++GAIM  AS+    +L  FG ++G+ FQL DDLLD   
Sbjct: 182 LQQMKTAALIRFACQAGAIMGRASKTLTHQLASFGTHIGLAFQLTDDLLDLTS 234


>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
 gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
          Length = 307

 Score =  227 bits (580), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 82/238 (34%), Positives = 132/238 (55%), Gaps = 14/238 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L S L + S +++  +D       + +   + +++  A+RY+LL GGK++R  L   
Sbjct: 11  TFDLKSYLSDRSCQVEAAID-------AALPVVYPEQIYEAMRYSLLAGGKRLRPILCLA 63

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +   +   A+    A+E +H  SLIHDDLP+MD+   RRGK T H  Y E  A++AG
Sbjct: 64  TCEMLGASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAG 123

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLT----HNIGLQGMLGGQMLDIQDEF--IDE 174
           + LLTYAFE I++   Q  D    Q +L +       +G +G++GGQ++D+  E   +DE
Sbjct: 124 DALLTYAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDE 183

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  I   KT AL+  +  SGA++A AS+   +RLR + + +G+ FQ+ DD+LD   
Sbjct: 184 ETLTFIHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITS 241


>gi|27376057|ref|NP_767586.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110]
 gi|27349196|dbj|BAC46211.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 110]
          Length = 307

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/238 (43%), Positives = 146/238 (61%), Gaps = 5/238 (2%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
                +L + +   + +L  LL       +     RL+ A+RY+ L GGK++R FLV E 
Sbjct: 7   SDFAKRLDKTADDTEALLGRLLADDILPDEIARPKRLMDAMRYSSLNGGKRLRPFLVVES 66

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H + D+ TAI+AG+
Sbjct: 67  AAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKKTDDATAILAGD 126

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQV 177
           GLLT AF+I++  +     N+R  L  +L    G+ GM+GGQ+LD+  E      +   V
Sbjct: 127 GLLTLAFDIVTRDEIHRDANVRLLLTRALARCAGIGGMVGGQILDLAGEGRFGGNEPIDV 186

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             IQ+MKTGAL+ + C +GAI+  A+  E + L  +G  LG  FQ+ADDLLD E D  
Sbjct: 187 ARIQQMKTGALLRYGCIAGAILGQATAKEYQALDDYGRALGEAFQIADDLLDVEGDAA 244


>gi|190571159|ref|YP_001975517.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018563|ref|ZP_03334371.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357431|emb|CAQ54865.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995514|gb|EEB56154.1| geranyltranstransferase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 260

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 131/212 (61%), Gaps = 12/212 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   +S+FN+    A+   AAIE 
Sbjct: 10  LVVEVNKLLPENSENKLISAMRYVLLAPAKHIRSFLVIASSSIFNIKVEKAITAAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP MDN   RRG+P+ H ++ E TA++AG+ LLT AFE++S    ++   
Sbjct: 70  IHAYSLIHDDLPCMDNSDTRRGQPSCHKKFGEATAVLAGDALLTLAFEVLSLLNCEI--- 126

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
                +  L+  IG++GM+GGQ+LDI     D  ++  I  MKT  L   +CE GAI+  
Sbjct: 127 -----IKVLSQAIGMKGMVGGQILDI---GADFDKIKEIHLMKTAKLFAASCEIGAIIGG 178

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A+  E+E L  +G NLG+IFQ  DD+ D E+D
Sbjct: 179 ATDKEREALYNYGINLGLIFQAKDDIEDYEQD 210


>gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101]
 gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101]
          Length = 290

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 79/231 (34%), Positives = 123/231 (53%), Gaps = 13/231 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + +D  L     +       ++N  L  ++ Y++ +GGK+IR  L+     ++  ++  
Sbjct: 7   KEEVDQSLKAYFDK-----DREYNKVLYDSMAYSVNVGGKRIRPILMLLSYYIYKSDYKK 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L    AIE IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +I+
Sbjct: 62  ILTPAIAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKIL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188
                +   +   +    +    G  GM+GGQ++DI +E    I   ++  +   KTG L
Sbjct: 122 VDYSLEEGISAL-KATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGEL 180

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           +  +  SGAI+A AS+ + ++L  FG  LG+ FQ+ DD+LD      DL K
Sbjct: 181 IKASIMSGAILAEASERDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231


>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
 gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
          Length = 297

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 11/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L + L+E   R+D  LD  L +     +T+    L  A+RY++  GGK++R  L+    
Sbjct: 2   DLKAYLKEQCARVDAALDSYLPR-----ETELPHSLHKAMRYSVFAGGKRVRPILMLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+    A+E IH YSLIHDDLP+MD+   RRG PT H  + E  AI+AG+ 
Sbjct: 57  QAVGGDTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDA 116

Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           LLT AF+++S+P     +    R  ++  +    G  GM+GGQ++D++ E    ID   V
Sbjct: 117 LLTEAFKLLSNPACAAGVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPTV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGAL+  A  +GA++  A + +   +  +G   G+ FQ+ADD+LD E 
Sbjct: 177 QYIHTHKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEG 231


>gi|240851259|ref|YP_002972662.1| geranyltranstransferase [Bartonella grahamii as4aup]
 gi|240268382|gb|ACS51970.1| geranyltranstransferase [Bartonella grahamii as4aup]
          Length = 300

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 111/233 (47%), Positives = 153/233 (65%), Gaps = 3/233 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               + L ++   ++  LD LL     + +      L+ A+RY  L GGK++R FLV + 
Sbjct: 2   HEFTTLLAKHGHTVEKRLDTLLSDQIQNGEISRPKNLIKAMRYGVLNGGKRLRPFLVIQS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF++    +L V  A+ECIHCYSLIHDDLP+MDN  +RRGKPTVHI +DE TAI+AGN
Sbjct: 62  AALFDIPVEYSLDVACALECIHCYSLIHDDLPAMDNDILRRGKPTVHIAFDEATAILAGN 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
            LLT+AFEII+   + L  +IR +L+ SL  + GL GMLGGQMLD++ E   +  + +  
Sbjct: 122 ALLTFAFEIIAHKASTLSTDIRIKLITSLAQSAGLGGMLGGQMLDLEAEKKPQGSSDIIT 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q MKT AL+ FAC++GAI+ +AS+   E+L  FG  LG+ FQL DDLLD   
Sbjct: 182 LQHMKTAALISFACQAGAIIGNASKELTEKLTDFGTYLGLAFQLTDDLLDVTA 234


>gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
 gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
          Length = 290

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 78/232 (33%), Positives = 126/232 (54%), Gaps = 15/232 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + +D  L     +       ++N  L  ++ Y++ +GGK+IR  L+     ++  ++  
Sbjct: 7   KEEVDQSLKAYFNK-----DREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKK 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L    AIE IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +++
Sbjct: 62  ILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVL 121

Query: 132 SSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187
                +  K  +++  ++      G  GM+GGQ++DI +E    I   ++  +   KTG 
Sbjct: 122 VDYSLEEGKSALKATKII--ADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +  SGA++A AS+ + ++L  FG  LG+ FQ+ DD+LD      DL K
Sbjct: 180 LIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231


>gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
 gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
          Length = 308

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 106/237 (44%), Positives = 143/237 (60%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L   ++  + +L  LL       +     RL+ AIRY+ L GGK++R FL  E A
Sbjct: 9   DFAKRLDATAEDTEALLGRLLSDDLLPDEIARPRRLMEAIRYSTLGGGKRLRPFLAVESA 68

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F V+   AL VGAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H  YD+ TAI+AG+ 
Sbjct: 69  AVFGVDRAGALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDA 128

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           LLT AF+II+  +      +R  L   L    GL GM+GGQMLD+  E      +   V 
Sbjct: 129 LLTLAFDIITRDEVHQDAKVRLDLNRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVA 188

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ + C +GAI+  AS    + L  +G  LG  FQ+ADDLLD E D  
Sbjct: 189 RLQQMKTGALLRYGCVAGAILGQASPEHYKALDDYGRALGEAFQIADDLLDVEGDAA 245


>gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
 gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
          Length = 290

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/231 (33%), Positives = 123/231 (53%), Gaps = 13/231 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + +D  L     +       ++N  L  ++ Y++ +GGK+IR  L+     ++  ++  
Sbjct: 7   KEEVDQSLKAYFNK-----DREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKK 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L    AIE IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +++
Sbjct: 62  ILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188
                +   +   +    +    G  GM+GGQ++DI +E    I   ++  +   KTG L
Sbjct: 122 VDYSLEEGTSAL-KATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGEL 180

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           +  +  SGA++A AS+ + ++L  FG  LG+ FQ+ DD+LD      DL K
Sbjct: 181 IKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231


>gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
           StLB046]
          Length = 294

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 138/235 (58%), Gaps = 10/235 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L   +  N  +++T + +L+    +         L  ++ Y+L  GGK+IR   V 
Sbjct: 1   MENMLKQFIDHNIPQLETTMYELVESIKA------PAHLKESMLYSLKAGGKRIRPLFVV 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               ++N +  T+  VG+A+E IH YSLIHDDLPSMD+  +RRGKPT H+ Y E  A +A
Sbjct: 55  AVCEMYNQSLETSYTVGSAVEMIHTYSLIHDDLPSMDDDELRRGKPTNHVVYGEALATLA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L T AF +I+     L    R +L+  L+   G +GM+GGQ+LD+  E   ++  ++
Sbjct: 115 GDALNTLAFGVIARLNN-LSAEKRIELVNLLSVAAGTEGMVGGQVLDMDGEKRLLNLKEL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTGAL+ F+ E+GA++A+AS +++E L  +  ++G+ FQ+ DD+LD E 
Sbjct: 174 ETVHVNKTGALLRFSIEAGAVLANASISDREALVEYAHHIGLAFQIQDDILDIEG 228


>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
           V4]
 gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
           V4]
          Length = 300

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 8/232 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            + + + E  + +++ L   +   A          L  AI Y L  GGK++R  L    A
Sbjct: 8   EIENYIFEQQQVVESALRKFVTGKAKK-----PRILHEAIDYCLFSGGKRLRPILCLAGA 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N   AL +  A+ECIH YSL+HDDLPSMDN   RRGKP++H  Y E  AI+ G+ 
Sbjct: 63  HAVCRNSDCALPMACAVECIHTYSLVHDDLPSMDNDDFRRGKPSLHKIYGEALAILTGDA 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LL  AFE+ S      +    SQ++  L    G + ++ GQ+ D++ E   I  TQ+  I
Sbjct: 123 LLALAFEVASLCSPLGRTYPVSQMIWELARTAGSRALVAGQVADLEAEGKEIGLTQLRYI 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT AL+  +   GA+ A A +   + +  +G  LG+ FQ+ DD+LD  +
Sbjct: 183 HCRKTAALITTSLRLGAMAADADKKTLDLITRYGRALGLAFQIIDDILDVTQ 234


>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
 gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
          Length = 295

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 92/245 (37%), Positives = 137/245 (55%), Gaps = 16/245 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L   + + S +++  L     +  +H       R+  A+RY+L+ GGK+IR  LV 
Sbjct: 1   MNPALQEFINDTSLQVNRCL-----EGWTHPADAVAPRVTEAMRYSLMNGGKRIRPTLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A   +V +   L    A+ECIH YSLIHDDLP+MDN  +RRGKPT HI +DE TAI+A
Sbjct: 56  AAARAVSVPNEATLAGAGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---- 175
           G+GL T AFE +S+ +          ++ +L    G +GM+ GQM+D++ E + +     
Sbjct: 116 GDGLQTLAFEKLSTIE---DPATAVAMIRTLALASGDKGMVAGQMIDMESEGLQQAFTIS 172

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
            +  I + KTGAL+  A   GA    ASQ + + L  + + +G+ FQ+ DD+LD   D  
Sbjct: 173 HLEKIHRHKTGALIRAAVLMGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVISDTA 232

Query: 234 -LPKK 237
            L K+
Sbjct: 233 TLGKR 237


>gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 289

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 84/230 (36%), Positives = 132/230 (57%), Gaps = 12/230 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            K I+  L++   +  S      N  +  +  Y+L +GGK+IR  L++    ++  ++  
Sbjct: 7   KKDINEYLENYFSEKGS-----FNRIIYDSCSYSLNIGGKRIRPILLSLTYYIYKEDYRK 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            + + AA+E IH YSLIHDDLP MDN  +RRGKPT HI++ E  A++AG+ LL  A  I+
Sbjct: 62  VIPMAAAMEMIHTYSLIHDDLPCMDNDDLRRGKPTNHIKFQENIAVLAGDALLNEAMIIM 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
                + ++N   +    +    G +GM+GGQ++DI  E   I + ++  +   KTGAL+
Sbjct: 122 MDYALKSENNAL-RAAHEIAVAAGAEGMIGGQVVDIISEGKKISQDELEYMHAKKTGALI 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
             A  SGAI+A A +++   LR +GE LG++FQ+ DD+LD   D   L K
Sbjct: 181 RAAIVSGAILAEAPEDDLRLLREYGEKLGLVFQIKDDILDVIGDSNVLGK 230


>gi|269965070|ref|ZP_06179235.1| geranyltranstransferase [Vibrio alginolyticus 40B]
 gi|269830373|gb|EEZ84598.1| geranyltranstransferase [Vibrio alginolyticus 40B]
          Length = 294

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N+++++  LD L               L+ A++Y  LLGGK++R FLV 
Sbjct: 1   MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AAIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF II+  + +   +  R  ++ +L H+ G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQRINMIKALAHSSGASGMCVGQALDLGAENRQVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231


>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
 gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
          Length = 309

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 14/242 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L S L++  + ++  LD         +     +++  A+RY+LL GGK++R  L   
Sbjct: 16  DFDLASYLKDKKQLVEAALDQ-------SLPIIRPEKIYEAMRYSLLAGGKRLRPILCLT 68

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       +L    A+E IH  SLIHDDLP+MD+   RRGK T H  Y E  AI+AG
Sbjct: 69  TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + LL+YAFE +++    +       ++  L   +G  G++GGQ+LD++ E    +    +
Sbjct: 129 DALLSYAFEYVATQTRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVDTL 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
             I   KTGAL+  +  SGAI+A A Q + ERL  + +N+G+ FQ+ DD+LD     E+L
Sbjct: 189 KFIHIHKTGALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTASTEEL 248

Query: 235 PK 236
            K
Sbjct: 249 GK 250


>gi|91225061|ref|ZP_01260283.1| geranyltranstransferase [Vibrio alginolyticus 12G01]
 gi|91190004|gb|EAS76275.1| geranyltranstransferase [Vibrio alginolyticus 12G01]
          Length = 294

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N+++++  LD L               L+ A++Y  LLGGK++R FLV 
Sbjct: 1   MQQTLTSFQQRNNQQLNLWLDQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AAIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF II+  + +   +  R  ++ +L H+ G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTIIADGQLSPAAEAQRINMIKALAHSSGASGMCIGQALDLGAENRQVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231


>gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
 gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
 gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
 gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
 gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
 gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
          Length = 290

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 78/231 (33%), Positives = 123/231 (53%), Gaps = 13/231 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + +D  L     +       ++N  L  ++ Y++ +GGK+IR  L+     ++  ++  
Sbjct: 7   KEEVDQSLKAYFNK-----DREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKK 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L    AIE IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  A +I+
Sbjct: 62  ILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKIL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGAL 188
                +   +   +    +    G  GM+GGQ++DI +E    I   ++  +   KTG L
Sbjct: 122 VDYSLEEGISAL-KATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGEL 180

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           +  +  SGA++A AS+ + ++L  FG  LG+ FQ+ DD+LD      DL K
Sbjct: 181 IKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGK 231


>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
 gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
          Length = 295

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 12/242 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   +    Q     ++  L   L +T        +D+L +++ Y+L+ GGK++R  L+ 
Sbjct: 1   MGAEMKELWQSRRTLVERALQAELDRTDI-----LDDKLRASMAYSLMAGGKRLRPILLM 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A    V+    +    A+E IH YSLIHDDLP+MDN   RRGK T H  YDE TAI+A
Sbjct: 56  AAADAVGVDGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYDEGTAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ LLT AF +I   +  +      +++       G +GM+GGQMLD++ E   I   ++
Sbjct: 116 GDALLTLAFTVILR-QQDVPAERLLRVVDETGRAAGAEGMVGGQMLDLEAENRRISMEEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
             +   KTGAL   A   GAI+A AS+ +   L  + ++ G+ FQ+ DD+LD      D+
Sbjct: 175 RRVHMGKTGALFRAALRCGAILAGASERQLAALTAYADHFGLAFQITDDILDVIGTAEDI 234

Query: 235 PK 236
            K
Sbjct: 235 GK 236


>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 315

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/233 (36%), Positives = 137/233 (58%), Gaps = 12/233 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   L++     D  L+ LL        TQ    +  A+R+++  GGK++R  LV E A 
Sbjct: 24  LKETLEQGRILADAALERLLPP-----GTQRPPSIHQAMRHSVFAGGKRLRPILVMEAAR 78

Query: 64  LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +   +       +GAA+E +H YSLIHDDLP++DN  +RRG+PT H+ + E TAI+AG+ 
Sbjct: 79  MITGSLPDGVDELGAALEMLHTYSLIHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDA 138

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFI--DETQVFM 179
           L TYA+E+++  +T      R Q++  + H  G + GM+GGQ+LD++ E    D   V  
Sbjct: 139 LQTYAYEVMARLRTT--AEARVQIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEY 196

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I + KTGAL+  +  +G + A A + + +R+R FG++ G+ FQ+ DD+LD  +
Sbjct: 197 IHRSKTGALITASVVAGGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQ 249


>gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
 gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP]
          Length = 308

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 91/241 (37%), Positives = 133/241 (55%), Gaps = 11/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M   L + L    +RI+  L + L Q+           L  A+ YA LLGGK+IR FL+ 
Sbjct: 12  MTYSLTTDLNAIQQRINHFLSNQLPQS-----PTEQPPLNQAMAYAVLLGGKRIRPFLMY 66

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V   T     AAIE IH YSL+HDDLP+MDN  +RRGKPT HI +DE TAI+A
Sbjct: 67  TTGKMLGVPLTTLDHSAAAIEAIHAYSLVHDDLPAMDNDQLRRGKPTCHIAFDEATAILA 126

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           GN L   AFE+I++    L D  + Q + +L+   G +GM  GQ LD   +++ ++ T++
Sbjct: 127 GNALQALAFELIANA-PHLTDWQKVQQIRTLSTAAGAKGMCLGQNLDLLAENKSLNLTEL 185

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             I + KTGAL+  +      ++  +QN   K+ L  + + +G+ FQ+ DD+LD      
Sbjct: 186 EQIHRHKTGALIVASVLMAVNLSDHAQNNAIKQPLERYAQAIGLAFQVQDDILDVIGQTD 245

Query: 236 K 236
           K
Sbjct: 246 K 246


>gi|317471815|ref|ZP_07931152.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316900706|gb|EFV22683.1| polyprenyl synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 297

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 11/237 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN     +L++    I+ ILD  L +     +T     +L A+   +  GGK++R  L+ 
Sbjct: 1   MNE-FDQELKKRISHIEEILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLME 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +F           AAIE IH YSLIHDDLP++DN   RRG+ T HI Y E  AI+A
Sbjct: 55  ETYKMFGGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           G+ LL YAFE  SS       ++   ++ +  L    G+ GM+GGQ  D++ E   +   
Sbjct: 115 GDALLNYAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSME 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           Q+  I   KT AL+      GA++A AS  + + +   G  +G+ FQ+ DD+LD   
Sbjct: 175 QIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITG 231


>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
          Length = 297

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 94/241 (39%), Positives = 135/241 (56%), Gaps = 12/241 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            + + L    KR+D  L+ L  +  S    +   RL   IRY+LL GGK+IR  L     
Sbjct: 2   EITAYLDMQKKRVDKALEALFERELS----REYGRLAEGIRYSLLAGGKRIRPVLALAAI 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +  + L +   +E +H YSL+HDDLP+MDN  +RRG+PT H+ Y E  AI+AG+ 
Sbjct: 58  EAVGGDGESLLPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDA 117

Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LLT+AF ++S P     L  + R +++  L+   GL GM+GGQ LDI  E   +   ++ 
Sbjct: 118 LLTHAFTLLSDPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELE 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235
            + + KTGAL+  +   G I+A AS    E L  +GE +GI FQ+ADDLLD     E+L 
Sbjct: 178 NLHRHKTGALLRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELG 237

Query: 236 K 236
           K
Sbjct: 238 K 238


>gi|167746999|ref|ZP_02419126.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662]
 gi|167653959|gb|EDR98088.1| hypothetical protein ANACAC_01711 [Anaerostipes caccae DSM 14662]
          Length = 297

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 11/237 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN     +L++    I+ ILD  L +     +T     +L A+   +  GGK++R  L+ 
Sbjct: 1   MNE-FDQELKKRISHIEKILDHYLPKPEGFQKT-----VLKAMNTTVKAGGKRLRPMLME 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +F           AAIE IH YSLIHDDLP++DN   RRG+ T HI Y E  AI+A
Sbjct: 55  ETYKMFGGKEKVIEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           G+ LL YAFE  SS       ++   ++ +  L    G+ GM+GGQ  D++ E   +   
Sbjct: 115 GDALLNYAFETASSAFALEDADLPKVAEAIRILARKPGIYGMIGGQAADVELEGTVLSME 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           Q+  I   KT AL+      GA++A AS  + + +   G  +G+ FQ+ DD+LD   
Sbjct: 175 QIMFIHHNKTSALIEACMMIGAVLAGASPEDVKAMEECGRKIGLAFQIQDDILDITG 231


>gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
 gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
          Length = 305

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/240 (43%), Positives = 147/240 (61%), Gaps = 12/240 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
             L   +   +  I+  L  L+  T          R++ A+RYA L GGK++R FLV + 
Sbjct: 8   SHLNEVMAAEALAINDHLSQLMPATDGP-----EGRVVDAMRYAALEGGKRLRPFLVLQS 62

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A LF+V+   AL V AAIE IHCYSLIHDDLP+MDN  +RRG+PTVH QYDE TAI+AG+
Sbjct: 63  AQLFSVSRACALNVAAAIEMIHCYSLIHDDLPAMDNDDLRRGRPTVHRQYDEPTAILAGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDET 175
            LLT AFE+I+ P T     +R  L+  L    G +GM+GGQM+D+  E       +D  
Sbjct: 123 ALLTKAFEVIALPGTHSDPAVRCDLVTELAIAAGAKGMVGGQMIDLMAERGLIDGALDVP 182

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  + ++KTG L+ F+  +GAI+  A +++++ L  +  +LG+ FQ+ADDLLD E D  
Sbjct: 183 AITRMHQLKTGRLISFSSIAGAILGKAPRSQRQALFNYAHDLGLAFQIADDLLDVEGDTA 242


>gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
          Length = 297

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/231 (37%), Positives = 126/231 (54%), Gaps = 8/231 (3%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64
              L+   +RI+T+LD  L   ++      + RL+ A+RYA L GGK++R  LV    + 
Sbjct: 7   SEALKAYQRRIETVLDQRLAADSAP-----DPRLIEAMRYATLSGGKRLRPVLVYAAGAT 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + AA+E +H YSLIHDDLP+MDN  +RRG+PT H  +DE TAI+AG+ L 
Sbjct: 62  CGAPDDVLDAMAAAVEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAGDALQ 121

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQK 182
             AFEI+++    L        +  L H  GL GM GGQ +D     + ID  ++  + +
Sbjct: 122 ACAFEIMTAGVRALPGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELERMHR 181

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +KTGAL+  +   GAI      +    L  + E +G+ FQ+ DD+LD E D
Sbjct: 182 LKTGALIRVSVRLGAIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGD 232


>gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13]
 gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13]
          Length = 301

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 134/238 (56%), Gaps = 12/238 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHM--QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           L++ +  I+++ +++     ++     ++N  L  ++ Y++ +GGK+IR  L+     ++
Sbjct: 7   LEDTAMNINSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINVGGKRIRPILMLLSYYIY 66

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             ++   L    AIE IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL 
Sbjct: 67  KSDYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLN 126

Query: 126 YAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181
            A +I+     +  K  +++  ++      G  GM+GGQ++DI +E    I   ++  + 
Sbjct: 127 EAMKILVDYSLEEGKSALKATKII--ADAAGSDGMIGGQIVDIINEDKEEISLKELDYMH 184

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTG L+  +  SGA++A AS+ + ++L  FG  LG+ FQ+ DD+LD      DL K
Sbjct: 185 LKKTGELIKASIMSGAVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDVVGNAKDLGK 242


>gi|182677419|ref|YP_001831565.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633302|gb|ACB94076.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 310

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 108/243 (44%), Positives = 150/243 (61%), Gaps = 8/243 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
                +L + ++  +  LD LL  +    +T    R L A+RYA L GGK++R FL+ E 
Sbjct: 8   EDFQQRLTQIAEATEKTLDHLLGPSPLPGETLRPPRFLEAMRYASLGGGKRLRPFLLVET 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A LF +     LR  +A+E IHCYSL+HDDLP++DN  +RRG+PT H  YDE TAI+ G+
Sbjct: 68  ARLFGIEGEGVLRAASALEMIHCYSLVHDDLPALDNDDLRRGRPTTHKAYDEATAILVGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQV 177
           GLLTYAF++++ P T     IR +L+L+L    G+ GM+GGQ+LDI+ E          V
Sbjct: 128 GLLTYAFDVLADPATHKDPAIRIELVLALARAAGVGGMVGGQVLDIEAEQAKTPHTAEAV 187

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
             +Q MKTGAL+ +A  +GAI A  S+  +E L  +G+ LG  FQ+ADD+LD E D   L
Sbjct: 188 IELQSMKTGALLHYAVIAGAIFAGVSKQTREALSAYGQALGAAFQVADDILDVEADTEAL 247

Query: 235 PKK 237
            KK
Sbjct: 248 GKK 250


>gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 297

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + +   + YA L GGK++R FL+ 
Sbjct: 1   MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N N    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ 
Sbjct: 54  ATLELLNQNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S    +L  + +   ++S T    G+ GM+GGQM+DIQ E   ID   
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLET 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I   KTG L+    E   I+A+  ++++E L  + + +G+ FQ+ DD+LD E    D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
 gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
          Length = 294

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 81/242 (33%), Positives = 140/242 (57%), Gaps = 15/242 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   +    K I+  ++++  ++   ++    +  +  ++Y L  GGK++R  L  
Sbjct: 1   MN--LKEYMNIRLKDINNNIENIFDKSDIELE----NSFIEMLKYPLDAGGKRLRPVLTL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF  ++  A+    ++E IH YSL+HDDLP+MDN  +RRGKPT H++Y E  AI+ 
Sbjct: 55  LACELFEGDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILV 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+GLLT+AF+++S  K  +KD+   +L+  L++  G+ GM+ GQ +D   +++ I+   +
Sbjct: 115 GDGLLTHAFQLLS--KADVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDML 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
            ++   KT A++  A   GAI +  + N+ E +  +GE +G+ FQ+ DD+LD   D   L
Sbjct: 173 KVLHAKKTAAMIRGAVRLGAISSE-NDNDIENITKYGEAIGLAFQIQDDILDVISDNETL 231

Query: 235 PK 236
            K
Sbjct: 232 GK 233


>gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
 gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
          Length = 313

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 83/235 (35%), Positives = 129/235 (54%), Gaps = 10/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L    +R+D  L + +    SH +     +L+ AIRY +L GGK+IR +LV    
Sbjct: 9   DFHQQLTLYQRRVDEKLKNFIQPLPSHSR-----QLIEAIRYTVLCGGKRIRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++  +     AA+ECIH YSL+HDDLP+MD+  +RRG+P+ HI++ E  AI+AG+ 
Sbjct: 64  KMFGLSPGSLDVAAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDA 123

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF +++  P   +    R +++  L   IG  GM  GQ LD+  E   I    +  
Sbjct: 124 LQTLAFSLLADQPMPNVTLENRLKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEK 183

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I + KTGAL+  A   GA+ A   S+     L  + + +G+ FQ+ DD+LD   +
Sbjct: 184 IHRHKTGALIRAAVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILDITGE 238


>gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
 gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
          Length = 297

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 84/243 (34%), Positives = 133/243 (54%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + + + + YA L GGK++R FL+ 
Sbjct: 1   MN-DFQVYLKEKTDFFETELKKELKELS------YPETIANGMEYAILNGGKRLRPFLLF 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N +    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ 
Sbjct: 54  VTLELLNEDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S    +L  + +   ++S T    G+ GM+GGQM+DI+ E   ID   
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLET 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I   KTG L+  + E   I+A+  ++++E L  + + +G+ FQ+ DD+LD E    D
Sbjct: 174 LKYIHSHKTGKLIKLSIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
          Length = 297

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 88/240 (36%), Positives = 136/240 (56%), Gaps = 11/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M+    ++L++   RI+  L +   +  S     +N  L  A++Y  LLGGK++R FLV 
Sbjct: 1   MSYQFGTELKQVQDRINQFLANQFEEIDS-----YNAHLRDAMKYGLLLGGKRVRPFLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AAIE IH YSLIHDDLP+MDN  +RRG+PT HI +DE TAI+A
Sbjct: 56  ATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L  +AFEI++   + L    + QL+  L    G+QGM  GQ LD+  E   ++  ++
Sbjct: 116 GDALQAFAFEILTEAPS-LSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +I + KTGAL+  A + G I +    ++  +++L  + + +G+ FQ+ DD+LD E D  
Sbjct: 175 ELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQTIGLAFQVQDDILDIEGDSA 234


>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
 gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
          Length = 293

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 7/231 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L++ S    + +D  L Q  S       ++L +A+RY+L  GGK+IR  L    A L   
Sbjct: 3   LKQFSTYTQSRVDQYLEQQLSDYAP--ANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGD 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+E IH YSLIHDDLP+MDN  +RRGKPT HIQ+DE TAI+AG+ L T+A
Sbjct: 61  ISSLTDASAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
           FE++S+P T  +  +  +L+  L    G  GM+ GQM+D   +++ I   ++  +   KT
Sbjct: 121 FELLSNP-TSAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKT 179

Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  +   GA+        +  +L  +   +G+ FQ+ DD++D   D  
Sbjct: 180 GALIKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTE 230


>gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
 gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
          Length = 306

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +R++  L D +           +  L+ A+RY A+LGGK++R +LV    
Sbjct: 9   DFSQQLTAHQQRVNQALLDFIAPL-----PFGDSDLVEAMRYGAVLGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++ +      AAIECIH YSLIHDDLP+MDN  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSLVNLDAPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHVKFGEANAILAGDA 123

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++    + + D  R  ++  L    G+ GM GGQ LD++ E   I    +  
Sbjct: 124 LQTLAFSILAEADMSDVADKDRLAMVAELARASGVAGMCGGQALDLEAEARQISLADLEQ 183

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGERGRAALPFLDRYAEAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
 gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
          Length = 292

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 81/235 (34%), Positives = 125/235 (53%), Gaps = 11/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
            L + L+E S+ +D  L          +      R+  A+ Y AL GGK++R  L+   A
Sbjct: 3   DLSTYLKERSELVDGFLK-------IRIGVGAISRVDEAMAYSALAGGKRLRPILLMAAA 55

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     L + +A+E IH YSLIHDDLP MDN   RRG+ T H  + +  A++AG+G
Sbjct: 56  DAVGGKGTDFLPLASALEMIHTYSLIHDDLPEMDNDDYRRGRLTNHKVFGQAMAVLAGDG 115

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
           LLT AFE+++  +  +   +  +++  +    G +GM+GGQ LDI  E   ++  ++  +
Sbjct: 116 LLTQAFEVMTE-QKGVDPALMVEIIHLIARCAGPEGMVGGQALDINAEEKHLEPAEMKQL 174

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL   A  SGA++   S++E   L  F    G+ FQ+ DD+LD E D  
Sbjct: 175 HEAKTGALFIAAIRSGALLGGGSKDEVNALTKFATFFGLAFQITDDILDVEGDSK 229


>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
           95/1000]
 gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
           95/1000]
          Length = 295

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 83/242 (34%), Positives = 137/242 (56%), Gaps = 14/242 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   +    K ID+ ++++   ++  ++    +  L  ++Y L  GGK++R  L  
Sbjct: 1   MN--LKEYMNIRLKDIDSEINNIFKSSSISLE----NNFLDMLKYPLDAGGKRLRPILTC 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LFN ++  A+    ++E IH YSL+HDDLP+MDN  +RRGKPT H++Y E  AI+ 
Sbjct: 55  LACELFNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILV 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+GLLT++FEI+S+    + D    +L+  +++  G+ GM+ GQ +D   ++  ID   +
Sbjct: 115 GDGLLTHSFEILSNAN--VNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEML 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
            ++   KTGA++  A   GAI +       E +  +GE +G+ FQ+ DD+LD   D   L
Sbjct: 173 KILHSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETL 232

Query: 235 PK 236
            K
Sbjct: 233 GK 234


>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
          Length = 295

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 88/234 (37%), Positives = 129/234 (55%), Gaps = 10/234 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L + L    K ++  LD +L             RL SA+R++L  GGK++R  L    A
Sbjct: 3   NLETYLARRQKAVNEALDRILADCVP------GGRLFSAMRHSLKAGGKRLRPILCMAAA 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    AL  G AIE IH YSL+HDDLP++DN  +RRG+P  H  +DE TAI AG+ 
Sbjct: 57  EAVGGTWEDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L T AFE++SS +    +   R  L+  ++   G  GM+ GQM DI  Q   +   Q+  
Sbjct: 117 LHTLAFEVLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKE 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + ++KTGAL+  +  +GA+   A+  +  +L  + EN+G+ FQ+ADDLL+ E D
Sbjct: 177 LHRLKTGALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGD 230


>gi|71892019|ref|YP_277749.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|71796125|gb|AAZ40876.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 306

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 89/243 (36%), Positives = 131/243 (53%), Gaps = 13/243 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
              ++L+E+ +R+D  +   L+        Q    L+ AIRY+ LLGGK++R FLV +  
Sbjct: 5   DFANELRESHQRVDEAISRYLIMFLK----QDVSLLMQAIRYSVLLGGKRLRPFLVYQTG 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF +         AAIECIH YSLIHDDLP MDN  +RRG PT H+++ E  A++AG+ 
Sbjct: 61  KLFGIRSSNLNAPAAAIECIHAYSLIHDDLPIMDNDKLRRGHPTCHVKFGESIAVLAGDA 120

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
           L T AF I+S      + D  R +++ +L    G  GM  GQ LD     ++ I  TQ+ 
Sbjct: 121 LHTLAFTILSEAHMPTITDQDRLKMIATLASASGANGMCLGQSLDLINKNNKNISATQLE 180

Query: 179 MIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEE--DL 234
            I + KTG+L+  A   GA+ A   +  +    L  +   +G+ FQ+ DD++D     D 
Sbjct: 181 TIYQYKTGSLIRAAVRIGALAAGNKSCDDVLSFLDHYATTIGLAFQIQDDIIDISHAYDQ 240

Query: 235 PKK 237
            KK
Sbjct: 241 KKK 243


>gi|85713667|ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
 gi|85699571|gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
          Length = 308

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 103/239 (43%), Positives = 145/239 (60%), Gaps = 5/239 (2%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           +     +L   +   + +L+ LL       +     RL+ A+RY+ L GGK++R FLV E
Sbjct: 7   SADFAKRLDSTADETEALLEKLLSDAPLPDEIARPKRLMDAMRYSSLGGGKRLRPFLVVE 66

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H   D+ TAI+AG
Sbjct: 67  SSAVFGVAREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDATAILAG 126

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQ 176
           +GLLT AF+II+  +      +R  L  +L    G+ GM+GGQ+LD+  E          
Sbjct: 127 DGLLTLAFDIITRDEVHQDPTVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFGDRGPVD 186

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           V  +Q+MKTGAL+ F C +GA++  ASQ + + L  +G  LG  FQ+ADDLLD E D  
Sbjct: 187 VARVQQMKTGALLRFGCIAGALLGQASQEDYQALDTYGRALGEAFQIADDLLDVEGDAA 245


>gi|57239293|ref|YP_180429.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579257|ref|YP_197469.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161372|emb|CAH58295.1| putative geranyltranstransferase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417883|emb|CAI27087.1| Possible geranyltranstransferase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 276

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 93/237 (39%), Positives = 132/237 (55%), Gaps = 9/237 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   +   ++  S+     L ++L +        H+D LL++++Y+L   GK IR FLV 
Sbjct: 1   MFYNISHLMENYSRLFTKELYNILPKAD------HDDILLASMKYSLFTPGKYIRPFLVN 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +FNVN    L V  AIE IH YSLIHDDLP MDN   RRG+ + H ++ E  AI+ 
Sbjct: 55  ASAQIFNVNIDRTLPVSVAIELIHVYSLIHDDLPGMDNEDTRRGQLSSHKKFTEAIAILT 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LLT AFE++S+        IR +++  LT  IG QGM+ GQ+LD +    D   +  
Sbjct: 115 GDALLTLAFEVLSTINE--SPYIRCRIIQVLTQAIGYQGMIKGQVLDTETIAKDINDIKT 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +KT  L   ACE G I+  AS  E   L+ +G NLG  FQ+ DD+ D  +D+ K
Sbjct: 173 MHTLKTACLFSAACEVGGILGGASDTELNSLKNYGLNLGFAFQIKDDIADICKDISK 229


>gi|222055717|ref|YP_002538079.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
 gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
          Length = 297

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 129/235 (54%), Gaps = 11/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L S L+E  + +D  L+  L      +       L  ++RY++  GGK+IR  L+    
Sbjct: 2   DLKSYLKERCQLVDDALNRFLP-----LADDLPASLHKSMRYSIFAGGKRIRPILMLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N   A+    A+E IH YSLIHDDLP+MD+   RRG PT H  + E  AI+AG+ 
Sbjct: 57  EAVGGNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDA 116

Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           LLT AF ++S+      +      Q++  ++   G +GM+GGQ++D++ E    ID   V
Sbjct: 117 LLTEAFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGAL+  + +SGA++  AS  + E L  +GE +G+ FQ+ADD+LD E 
Sbjct: 177 QYIHTHKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEG 231


>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
 gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
 gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
 gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
          Length = 307

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 95/244 (38%), Positives = 129/244 (52%), Gaps = 13/244 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
                 KL    +R+D  L+  L           +  L  A+RY ALLGGK++R FLV  
Sbjct: 8   TDAFRQKLHSAHQRVDEALNQALQTL-----PFSDMPLSQAMRYGALLGGKRLRPFLVYA 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +FNV         AAIECIH YSLIHDDLP+MDN  +RRGKPT HI++ E  AI+AG
Sbjct: 63  VGEMFNVPVANLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAG 122

Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
           + L T AFEI++ +    +    R  ++  L    GL GM GGQ   LD +D+ ID   +
Sbjct: 123 DALQTLAFEILAKNAMPDVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVAL 182

Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC---EED 233
             I   KTGAL+  A   GA+ A     +    L  +  ++G+ FQ+ DD+LD     E+
Sbjct: 183 EKIHLHKTGALIRAAVRLGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEE 242

Query: 234 LPKK 237
             K+
Sbjct: 243 TGKR 246


>gi|75674693|ref|YP_317114.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74419563|gb|ABA03762.1| farnesyl-diphosphate synthase [Nitrobacter winogradskyi Nb-255]
          Length = 308

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 107/245 (43%), Positives = 147/245 (60%), Gaps = 10/245 (4%)

Query: 1   MNGGLPS-----KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIR 54
           M  GL S     +L   +   + +L+ LL       +     RL  A+RY+ L GGK++R
Sbjct: 1   MTSGLSSADFAIRLDTTADETEAVLEKLLSDAPLPDEIARPRRLTDAMRYSSLGGGKRLR 60

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            FLV E +++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H   D+ 
Sbjct: 61  PFLVVESSAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDDA 120

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--- 171
           TAI+AG+GLLT AF+II+  +      +R  L  +L    G+ GM+GGQ+LD+  E    
Sbjct: 121 TAILAGDGLLTLAFDIITRDEVHDDPAVRLLLTRALARAAGIGGMVGGQLLDLAGEGRFG 180

Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                 V  +Q+MKTGAL+ F C +GA++  ASQ + + L  +G  LG  FQ+ADDLLD 
Sbjct: 181 DRGPVDVARVQQMKTGALLRFGCIAGALLGQASQKDYQALDAYGRALGEAFQIADDLLDV 240

Query: 231 EEDLP 235
           E D  
Sbjct: 241 ESDAA 245


>gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittGG]
 gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittGG]
          Length = 296

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL+A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLNAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
          Length = 303

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 87/237 (36%), Positives = 137/237 (57%), Gaps = 9/237 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            + + L      ++  L+ L ++            L  ++RY+LL GGK+IR  L     
Sbjct: 8   AIEAYLNRCKYAVEQFLESLFVKELG----TDYGTLAESMRYSLLAGGKRIRPVLAMAAM 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + + +  + + A +E IH YSLIHDDLPSMD+  +RRGKPT H+ Y + TAI+AG+ 
Sbjct: 64  EALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDDDSLRRGKPTNHVIYGDATAILAGDA 123

Query: 123 LLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LLT+AF ++S P     +   IR +++  L+   G+ GM+GGQ +DI  E   ++ + + 
Sbjct: 124 LLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAGINGMVGGQQMDIASEGKALNLSSLE 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + + KTGAL+  +   GA++  AS ++ ERL  +G+ +GI FQ+ADDLLD E D  
Sbjct: 184 FLHQHKTGALIRASLRIGALLGKASSSDFERLDRYGQAVGIAFQIADDLLDVEGDAA 240


>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
           7421]
 gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
           7421]
          Length = 295

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 13/241 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L + L++   +++  LD  L Q       Q+ D+L  A+RY+LL GGK++R  L   
Sbjct: 3   QFDLDAYLRQCRSQVEAALDRYLPQ-------QYPDKLYEAMRYSLLAGGKRLRPILCLT 55

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +   +   A+    A+E +H  SLIHDDLP+MD+   RRGK T H  Y E  AI+AG
Sbjct: 56  SCRMSGGSADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAG 115

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + LL YAF++I+      +     +++  L       G++GGQ++D++ E   I    + 
Sbjct: 116 DALLAYAFQLIAEKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLE 175

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KTGAL+  +  SGAI+A A     ERL  +   +G+ FQ+ DDLLD      +L 
Sbjct: 176 YIHTHKTGALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELG 235

Query: 236 K 236
           K
Sbjct: 236 K 236


>gi|121601917|ref|YP_988458.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
 gi|120614094|gb|ABM44695.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
          Length = 300

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 107/233 (45%), Positives = 147/233 (63%), Gaps = 3/233 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               + L +++  +   L+ LL       +    + LL A+RY  L GGK +R F V + 
Sbjct: 2   HEFTTLLAKHADAVKQRLNMLLNNHVQEGEIARPELLLQAMRYGVLNGGKCLRPFFVIQS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF+V    AL VG A+ECIHCYSLIHDDLP+MDN  +RRGKPTVH  +DE TAI+AGN
Sbjct: 62  AALFDVPPEHALDVGVALECIHCYSLIHDDLPAMDNDILRRGKPTVHKAFDEATAILAGN 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
            LLT+AFEII+     L    R  L+ +L    GL GM+GGQ+LD++ E    D T++  
Sbjct: 122 ALLTFAFEIIAHKACALLPQTRLNLITALAQAAGLGGMIGGQILDLEAEKKPQDRTKILT 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q+MKT AL+ F+C++GAIM +AS +  ++   FG  +G+ FQL DDLLD   
Sbjct: 182 LQRMKTAALISFSCQAGAIMGNASASITQQFADFGTQIGLAFQLTDDLLDVTS 234


>gi|220929321|ref|YP_002506230.1| polyprenyl synthetase [Clostridium cellulolyticum H10]
 gi|219999649|gb|ACL76250.1| Polyprenyl synthetase [Clostridium cellulolyticum H10]
          Length = 294

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 8/220 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+  L +++ +   +        +  A+ Y+LL GGK++R  L    A +F+      + 
Sbjct: 14  IEERLHNIIPEVDEYCLD-----IEQAMSYSLLAGGKRLRPVLALAVAEMFDKPFDEVIN 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            G AIE IH YSLIHDDLP+MDN   RRGK T H  + E  AI+AG+GLL  A+EI+ + 
Sbjct: 69  FGCAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDGLLNMAYEIMIND 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFA 192
             + ++  + +    +    G  GM+GGQ++D+Q E   I+  ++  + ++KTGAL+   
Sbjct: 129 AVESRNIEKMRAAGIVAKYAGALGMVGGQVIDLQSEEKTIESDRLKTMHRLKTGALIKAP 188

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E+ A++  A + E E L  +  NLG+ FQ+ DD+LD E 
Sbjct: 189 VEAAAVICGADKKEFELLSGYAANLGLAFQIKDDILDIEG 228


>gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           6P18H1]
 gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           6P18H1]
          Length = 296

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 134/238 (56%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
 gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
          Length = 296

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 103/235 (43%), Positives = 150/235 (63%), Gaps = 8/235 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M   L + + +  ++++  +D LL +           RL  A+RY  L GGK++R FLV 
Sbjct: 1   MPKTLTAAMADTVEQVEAAIDVLLPRVDLP-----EARLFEAMRYGCLGGGKRLRPFLVM 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A LF VN   ALR  AA+E IHCYSL+HDDLP+MD+  +RRG+PT+H++YDE TAI+A
Sbjct: 56  ESARLFGVNPACALRAAAAVEFIHCYSLVHDDLPAMDDSDLRRGRPTLHLEYDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ LLT AFEI++ P+T     +R +L+ +L    G +GM+GGQMLD   +D   D   +
Sbjct: 116 GDALLTVAFEILADPETHEDAQVRCRLVSALAKAAGPRGMVGGQMLDLMAEDRTFDIGAI 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +Q++KTG L+ F+  +GAI+  AS  +   L+ +  +LG+ FQ+ADDLLD E 
Sbjct: 176 TRLQRLKTGELIAFSATAGAILGRASPPQHHALQAYAHDLGLAFQIADDLLDVEG 230


>gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846]
          Length = 296

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 134/238 (56%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      +   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQSLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKKLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13]
          Length = 298

 Score =  225 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 82/237 (34%), Positives = 128/237 (54%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L + +++  K ++  L   +         +  + LL ++ Y+L  GGK++R  LV    
Sbjct: 6   DLQTFMKDRKKLVEDALFSYMN------AVEAPEVLLESMNYSLKAGGKRLRPLLVLATL 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       + V  A+E IH YSL+HDDLPSMD+   RRGKPT H  + E  AI+AG+ 
Sbjct: 60  KSFGKPEELGMPVACAVEMIHTYSLVHDDLPSMDDDDFRRGKPTNHKVFGEAMAILAGDA 119

Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLT++FE++       +K      LM  L    G  GM+GGQ+ D++ E   +    +  
Sbjct: 120 LLTHSFEVMEDLLNFDVKPMKVVTLMKELAKAAGPTGMVGGQVADMEGEGAQLSLQDLEY 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + KTG L+ F+  +GAI+  A++ +  +L  F ++LG+ FQ+ DD+LD E D  K
Sbjct: 180 IHRNKTGKLLGFSIVAGAILGDATEEQISKLEQFADHLGLAFQIRDDILDIEGDAAK 236


>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
 gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
          Length = 297

 Score =  225 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+        E    I++ L+  L  T          RL  A+RYA+L GGK++R  L  
Sbjct: 1   MHPDFQLWTTERLALIESFLEQNLPATNCA-----PARLHEAMRYAVLNGGKRVRPLLSF 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   +    +   AA+E IH YSL+HDDLP MDN  +RRGKPT HI+Y E TA++ 
Sbjct: 56  AAGELSGADKTQVIAASAAVELIHAYSLVHDDLPCMDNDILRRGKPTCHIRYGEPTALLV 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
           G+ L + AF++++          + +++  L    G +GM GGQ   LD   + +   ++
Sbjct: 116 GDSLQSLAFQLLAESALTEDPRTQLEMIRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPEL 175

Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTGAL+  A   GA      ++++ ++L  F + +G+ FQ+ DD+LD E 
Sbjct: 176 EFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLDHFAKCIGLAFQVVDDILDAEA 231


>gi|237737790|ref|ZP_04568271.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
 gi|229419670|gb|EEO34717.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
          Length = 300

 Score =  225 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 9/234 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L    K ++  +D  L +        + + +   ++YA+L GGK++R  L+     
Sbjct: 8   FKEYLGMGKKLVEDGIDKYLGEL------TYPEVIAEGMKYAVLNGGKRLRPILLFMTLD 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +        L   +AIE IH YSL+HDDLP++DN   RRGK T H ++ E   I+ G+ L
Sbjct: 62  ILGCEREKGLATASAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDAL 121

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT+AF +++   + L      +++   +   G+ GM+GGQM+DI  E   ID   +  + 
Sbjct: 122 LTHAFYVLTEKNSHLSAEKIVEIVKLTSSYAGINGMIGGQMVDIASEGKKIDLETLRYMH 181

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             KTG L+    E   ++A AS  ++E L  + E +G+ FQ+ DD+LD E D  
Sbjct: 182 AHKTGKLIKLPVEVACVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDFE 235


>gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047]
 gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047]
          Length = 296

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 137/238 (57%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+  L    SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLETQLEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYTT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAGKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L  + G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAKSSGIQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +   A +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAETIGLAFQVQDDILDIEGDSA 233


>gi|56551751|ref|YP_162590.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762408|ref|ZP_04760487.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|56543325|gb|AAV89479.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373095|gb|EER62744.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 298

 Score =  224 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 97/240 (40%), Positives = 148/240 (61%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M   L + +++ ++ ID +  + L      +      RL+ A+RYA + GGK++R  LV 
Sbjct: 1   MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVV 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LFNV+   ALRVG AIECIH YSLIHDD+P MDN  +RRGKPTVH  +D+ +A+++
Sbjct: 56  ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175
           G+ L   AFEI+S  K     ++R +L+ +L    G  GM+GGQ +D+  E      D  
Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLP 175

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +Q++KTGAL  F  E+GAIM   +++ ++RL+ +  ++G+ FQ+ADDL+D E D  
Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235


>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
 gi|156866965|gb|EDO60337.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
          Length = 293

 Score =  224 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 10/228 (4%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +   RI+  L   L       +      ++ A+ Y+LL GGK+IR  L  E   +   + 
Sbjct: 6   QYLSRIEEALASYLP-----AKDCLQKDVIEAMEYSLLAGGKRIRPTLTLEFCRVCGGDV 60

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A+    A+E IH YSLIHDDLP MDN  +RRG+P  HIQY E  A++AG+GLLT AFE
Sbjct: 61  QAAMPFACAVEMIHSYSLIHDDLPCMDNSDLRRGRPANHIQYGEDIALLAGDGLLTLAFE 120

Query: 130 IISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
              SP++         ++    L    G +GM+GGQ++D   +++      +  + + KT
Sbjct: 121 TALSPESIKLAGAQRGAEAARLLAKAAGAEGMVGGQVIDLQHENQRAPIEVLLEMDRKKT 180

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  A + G  +A A Q ++E    +   +G+ FQ+ DD+LD   D
Sbjct: 181 GALIQAAAQMGCAVAGADQKQREAAVEYAACVGLAFQIRDDILDVISD 228


>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
 gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
          Length = 296

 Score =  224 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 122/234 (52%), Gaps = 9/234 (3%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
              +     R++  L+  L   +         RL  A+RYA+LGG K++R  L       
Sbjct: 5   EDWVNALQARVEQALEKTLPPASKP-----PKRLHEAMRYAVLGGGKRLRPLLTYSAGMA 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V         +A+E IH YSL+HDDLPSMDN  +RRG+PT H  + E TA++AG+ L 
Sbjct: 60  VGVAEAALDAPASAVELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLAGDALQ 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQK 182
             AF I++ P + +    +  ++  L    G +GM GGQ +D+    I    +++  + +
Sbjct: 120 ALAFRILAEPASTIPAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMETMHR 179

Query: 183 MKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +KTGAL+  +   GA    A +Q+  E+L  F + +G+ FQ+ DD+LD E D  
Sbjct: 180 LKTGALIRASVLLGAWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTA 233


>gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 297

 Score =  224 bits (571), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + +   + YA L GGK++R FL+ 
Sbjct: 1   MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N N    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ 
Sbjct: 54  VTLELLNENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S    +L  + +   ++S T    G+ GM+GGQM+DIQ E   ID   
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGIDGMIGGQMIDIQSENKKIDLET 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I   KTG L+    E   I+A+  ++++E L  + + +G+ FQ+ DD+LD E    D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANLEKDKREVLEEYADLIGLAFQVKDDILDVEGTFED 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118]
 gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118]
          Length = 297

 Score =  224 bits (571), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 6/205 (2%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDL 92
            N  L  ++RY++  GGK+IR  LV   A         +  +V  ++E +H YSLIHDDL
Sbjct: 30  SNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDL 89

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H ++ +  A++AG+GLLT +FE +S   T + ++ + +L+  L  
Sbjct: 90  PEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLS--LTDIDNDKKIKLISQLAL 147

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G QGM+ GQ  DI  E    +  ++  +   KTGAL+ +AC +G I++ AS N+ E L
Sbjct: 148 AAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELL 207

Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
           R +GEN G+ FQ+ DDLLD   D  
Sbjct: 208 RKYGENFGLAFQIYDDLLDVIGDAK 232


>gi|294785112|ref|ZP_06750400.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
 gi|294486826|gb|EFG34188.1| geranyltranstransferase [Fusobacterium sp. 3_1_27]
          Length = 297

 Score =  224 bits (571), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + +   + YA L GGK++R FL+ 
Sbjct: 1   MN-DFQVYLKEKTDFFETELKKELKELS------YPEIIAKGMEYATLNGGKRLRPFLLF 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N N    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ 
Sbjct: 54  ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S    +L  + +   ++S T    G+ GM+GGQM+DI+ E   I    
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I   KTG L+    E   I+A+  +++++ L  + + +G+ FQ+ DD+LD E    D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFED 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
          Length = 297

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 87/237 (36%), Positives = 135/237 (56%), Gaps = 11/237 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M+    ++L++   RI+  L +   +  S     +N  L  A++Y  LLGGK++R FLV 
Sbjct: 1   MSYQFGTELKQVQDRINQFLANQFEEIDS-----YNAPLRDAMKYGLLLGGKRVRPFLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AAIE IH YSLIHDDLP+MDN  +RRG+PT HI +DE TAI+A
Sbjct: 56  ATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGQPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L  +AFEI++   + L    + QL+  L    G+QGM  GQ LD+  E   ++  ++
Sbjct: 116 GDALQAFAFEILTEAPS-LSAEQKLQLVKVLAQASGVQGMCLGQSLDLISEHKQVNLDEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +I + KTGAL+  A + G I +    ++  +++L  + + +G+ FQ+ DD+LD E 
Sbjct: 175 ELIHRNKTGALLTAALKLGFICSPHFENKELEQQLERYSQAIGLAFQVQDDILDIEG 231


>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
 gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
          Length = 321

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
              P+ L+    R++  LD       + +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 28  FDFPAYLEAARLRVEAALD-------AALGPERPESLREAMRYSLLAGGKRLRPILCLAA 80

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+
Sbjct: 81  CELAGGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGD 140

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
            LLT AFE+++   + +       ++  L+   G  G++GGQ++D   + + +D   +  
Sbjct: 141 ALLTRAFEMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEY 200

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+      GA++A A       LR +   +G+ FQ+ DD+LD   
Sbjct: 201 IHLHKTGALLRACVLCGALIAGAPDALLTALRTYARGIGLAFQIIDDILDVTA 253


>gi|254994133|ref|ZP_05276323.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
           J2-064]
          Length = 233

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  S    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|237742320|ref|ZP_04572801.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
 gi|229429968|gb|EEO40180.1| dimethylallyltransferase [Fusobacterium sp. 4_1_13]
          Length = 297

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 129/243 (53%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + +   + YA L GGK++R FL+ 
Sbjct: 1   MN-DFQVYLKEKTDFFETELKRELKELS------YPETIAKGMEYATLNGGKRLRPFLLF 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N N    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ 
Sbjct: 54  ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S    +   + +   ++S T    G+ GM+GGQM+DI+ E   I    
Sbjct: 114 GDSLLTYAFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I   KTG L+    E   I+A+  +++++ L  + + +G+ FQ+ DD+LD E    D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFED 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio vulnificus MO6-24/O]
 gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase [Vibrio
           vulnificus MO6-24/O]
          Length = 294

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L S  Q N+++++  LD L            N  L+ A+RY L LGGK+ R FLV 
Sbjct: 1   MIDVLASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +   +        +AIECIH YSLIHDDLP+MD+  +RRG+PT H+++DE TAI+ 
Sbjct: 52  ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTILAEGTLSPDGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A   GA+ A         +L  +   +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTE 231


>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           coahuilensis m4-4]
          Length = 294

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 84/239 (35%), Positives = 134/239 (56%), Gaps = 10/239 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L S + E       I+D  L++   ++       L  ++ Y++  GGK+IR  L+ 
Sbjct: 1   MTTNLRSFMTEYK----AIIDKELVEQIDYLSI--PTSLKESMIYSVSAGGKRIRPVLLL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F  +    ++   A+E +H YSLIHDDLPSMD+  +RRGKPT H  + E TAI+A
Sbjct: 55  ATIEAFGKSPALGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEATAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLTY+FE+I+S K  +    + +L+       G +GM+GGQ+ D++ E   +   ++
Sbjct: 115 GDALLTYSFEVIASMK-DILPQTKIELVRLFAKAAGPEGMVGGQVADMEGERKTLTLEEL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I + KTG L+ +A  +GAI+  AS+ E    + + E++G+ FQ+ DD+LD E    K
Sbjct: 174 EYIHRNKTGKLLQYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDK 232


>gi|37679053|ref|NP_933662.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
 gi|37197795|dbj|BAC93633.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
          Length = 298

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L S  Q N+++++  LD L            N  L+ A+RY L LGGK+ R FLV 
Sbjct: 5   MIDVLASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +   +        +AIECIH YSLIHDDLP+MD+  +RRG+PT H+++DE TAI+ 
Sbjct: 56  ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD   ++  +   +
Sbjct: 116 GDALQTLAFTILAEGTLSPDGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A   GA+ A         +L  F   +G+ FQ+ DD+LD   D  
Sbjct: 176 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKFSTAIGLAFQVQDDILDIISDTE 235


>gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 297

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 13/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
                L+E +   +T L   L + +      + + +   + YA L GGK++R FL+    
Sbjct: 3   DFQVYLKEKTSFFETELKKELQELS------YPETIAKGMEYAILNGGKRLRPFLLFATL 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L N N    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ G+ 
Sbjct: 57  ELLNQNIEKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF I+S    +   + +   ++S T    G+ GM+GGQM+DI+ E   ID   +  
Sbjct: 117 LLTYAFYILSQKNLKFLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLETLKY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I   KTG L+    E   I+A+  +++KE L  +   +G+ FQ+ DD+LD E    +L K
Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGK 236


>gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
 gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
          Length = 308

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 102/237 (43%), Positives = 144/237 (60%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L   ++  + +L  LL       +     RL+ AIRY+ L GGK++R FL  E A
Sbjct: 9   DFAKRLDSTAEDTEALLGRLLSDELMTDEIARPRRLMEAIRYSTLGGGKRLRPFLAVESA 68

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F ++   AL VGAA+ECIHCYSLIHDDLP+MD+  +RRG+PT+H  YD+ TAI+AG+ 
Sbjct: 69  AVFGIDRDAALLVGAALECIHCYSLIHDDLPAMDDSDLRRGRPTLHKAYDDATAILAGDA 128

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           LLT+AF+I++  +      +R  L   L    GL GM+GGQMLD+  E      +   V 
Sbjct: 129 LLTFAFDIVTRDEVHTDPTVRLMLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVA 188

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ + C +GAI+  A+  +   L  +G  LG  FQ+ADDLLD E D  
Sbjct: 189 KLQQMKTGALLRYGCVAGAILGQANAEQYRALDDYGRALGEAFQIADDLLDVESDAE 245


>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
 gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 297

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 126/236 (53%), Gaps = 9/236 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M+    S   E    ++T L+  L +T          RL  A+RY++LGG K++R  L  
Sbjct: 1   MHPDFQSWASEQLALVETCLEKHLPETNCA-----PARLHDAMRYSVLGGGKRVRPLLSF 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   +   A   GAA+E IH YSL+HDDLP MDN  +RRGKPT H++YDE TA++ 
Sbjct: 56  AAGELSGADKTHATIAGAAVELIHVYSLVHDDLPCMDNDTLRRGKPTCHVRYDEPTALLV 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
           G+ L + AF++++        +++ +++  L    G +GM GGQ   LD   + +   ++
Sbjct: 116 GDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPEL 175

Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTGAL+  A   GA   +   + + + L  F + +G+ FQ+ DD+LD E 
Sbjct: 176 EFMHIHKTGALIRAAVILGARCGNRLDETQFKLLDHFAKCMGLAFQVIDDILDTEA 231


>gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739]
 gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
          Length = 299

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MDN  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|257125255|ref|YP_003163369.1| polyprenyl synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049194|gb|ACV38378.1| Polyprenyl synthetase [Leptotrichia buccalis C-1013-b]
          Length = 296

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 86/243 (35%), Positives = 138/243 (56%), Gaps = 15/243 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L   L++  K ++  L +LL     + + ++ ++L  A+ YA++ GGK+IR  L+     
Sbjct: 2   LREYLEDKKKIVEGNLKELL----GNYENKYPEKLSEAMEYAVMNGGKRIRPILMYMICD 57

Query: 64  LFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           LF  N    +     + AA+E IHCYSL+HDDLP+MDN   RRGK TVH +Y+E   ++ 
Sbjct: 58  LFEKNNCKSYDKIKEIAAALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLV 117

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT AF II++ K+ L D  + +++  L+   G  GM+GGQ +D++ E   ++   +
Sbjct: 118 GDVLLTEAFGIIANSKS-LGDKNKIEIISKLSEYAGFFGMVGGQFVDMESENKKVEIDTL 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
             I   KTG L+  A E   I       ++E++  + + LGI FQ+ DD+LD E    ++
Sbjct: 177 KYIHAHKTGKLLTAAIELPMIALDIESEKREKMVEYSKLLGIAFQIKDDILDIEGNFEEI 236

Query: 235 PKK 237
            KK
Sbjct: 237 GKK 239


>gi|319425679|gb|ADV53753.1| Polyprenyl synthetase [Shewanella putrefaciens 200]
          Length = 293

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 134/238 (56%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE   R+DT L                 +L +A++Y ALLGGK+IR FLV     
Sbjct: 2   LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++     +       ++ +L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A +++ + +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234


>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
 gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
          Length = 309

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L +    ++  LD  L+        +  + L  A+RY+LL GGK++R  L    
Sbjct: 18  FDFKAYLAKAKATVEQALDQSLV-------PERPESLREAMRYSLLAGGKRLRPILCLAA 70

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+
Sbjct: 71  CELAGGDAAQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 130

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE+++     +      +++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 131 ALLTRAFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEY 190

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+     +GA++  A       LR +   +G+ FQ+ DD+LD   
Sbjct: 191 IHLHKTGALLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITA 243


>gi|146292379|ref|YP_001182803.1| polyprenyl synthetase [Shewanella putrefaciens CN-32]
 gi|145564069|gb|ABP75004.1| farnesyl-diphosphate synthase [Shewanella putrefaciens CN-32]
          Length = 293

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 135/238 (56%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE   R+DT L                 +L +A++Y ALLGGK+IR FLV     
Sbjct: 2   LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++   + +       ++ +L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVSGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A +++ + +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234


>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
 gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
          Length = 293

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 141/242 (58%), Gaps = 14/242 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   ++ N  +I+  +  L+ +  + +       L  ++ Y+L  GGK+IR   V 
Sbjct: 1   MNEPLKYFIESNIPQIEETMFALVSKIDAPVD------LKDSMLYSLKAGGKRIRPLFVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L+  N    L VG+ IE IH YSLIHDDLPSMDN   RRGKPT H  Y E  A +A
Sbjct: 55  AVLELYQKNLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ L T AF I++  + ++    R +L+  L+   G +GM+GGQ+LD++ E   +D T++
Sbjct: 115 GDALNTLAFGILA--RMEVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTEL 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
             +   KTGAL+ F+ E+GA++A AS+ ++  L+ +  ++G+ FQ+ DD+LD E    +L
Sbjct: 173 EQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEEL 232

Query: 235 PK 236
            K
Sbjct: 233 GK 234


>gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866]
          Length = 296

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 134/238 (56%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQNRINHFLEAQFEGIESH-----NAPLLDAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T   V AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALVQILAQGSGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|256027758|ref|ZP_05441592.1| dimethylallyltransferase [Fusobacterium sp. D11]
 gi|289765715|ref|ZP_06525093.1| dimethylallyltransferase [Fusobacterium sp. D11]
 gi|289717270|gb|EFD81282.1| dimethylallyltransferase [Fusobacterium sp. D11]
          Length = 297

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + +   + YA L GGK++R FL+ 
Sbjct: 1   MN-DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLF 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N N    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ 
Sbjct: 54  VILELLNENINKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S    +L  + +   ++S T    G+ GM+GGQM+DI+ E   ID   
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSKQIVNIISKTSEYAGINGMIGGQMIDIESENKKIDLET 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I   KTG L+    E   I+A+  +++KE L  + + +G+ FQ+ DD+LD E    D
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIANVEKDKKEVLEEYADLIGLAFQVKDDILDVEGTFED 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 300

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 127/233 (54%), Gaps = 8/233 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  +L++  +  +  ++D +             R+  A+ Y+L +GGK++R  L    A 
Sbjct: 7   LKRELKDKKEIFERYMEDWV----GSRPEGVPPRMWDAMVYSLKVGGKRLRPVLCMAAAE 62

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L        L +  A+E +H  SLIHDDLP+MD+  +RRG+PT H+ Y E  AI+AG+ L
Sbjct: 63  LLGGRSDLVLPMALALEMVHTASLIHDDLPAMDDDVLRRGQPTNHVVYGEALAILAGDAL 122

Query: 124 LTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--MI 180
           L  AFE+ ++   +++      + +     +IG  G+ GGQ+LD++ E  +E       I
Sbjct: 123 LCQAFELPLTELPSEIPRGNVVKAVAHFARSIGPGGICGGQVLDMESEGSEEECSSPTEI 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +KT AL+  +  +GAI++  S  + E L  +G  LG+ FQ+ADD+LD + D
Sbjct: 183 STLKTAALIRTSLITGAILSGGSAEDLEALESYGLELGVAFQIADDILDVKGD 235


>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 298

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 82/233 (35%), Positives = 131/233 (56%), Gaps = 11/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   L +  + +D+ LD L+       ++   + +  A+RY+L  GGK+IR  L  E A
Sbjct: 7   DLRDYLAQQQRLVDSELDRLVPP-----ESAAPETIHRAMRYSLFAGGKRIRPILCIEAA 61

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +         ++E IH YSLIHDDLP++DN   RRGK T H  + +  AI+AG+ 
Sbjct: 62  RTVSDDCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDS 121

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQ--VFM 179
           LLT AF++++       D  +++L+  L    G + GM+GGQ+ D++ E        +  
Sbjct: 122 LLTLAFQVLAQLDA--PDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLET 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I + KTGAL+  +   GAI A A++ + E L C+G+++G+ FQ+ DD+LD EE
Sbjct: 180 IHRAKTGALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEE 232


>gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
 gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
          Length = 298

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L S  Q N+++++  LD L            N  L+ A+RY L LGGK+ R FLV 
Sbjct: 5   MIDVLASFQQRNNQQLNLWLDKL---------PHQNQALIQAMRYGLVLGGKRARPFLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +   +        +AIECIH YSLIHDDLP+MD+  +RRG+PT H+++DE TAI+ 
Sbjct: 56  ATGEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILT 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD   ++  +   +
Sbjct: 116 GDALQTLAFTILAEGTLSADGETQRVAMIQALAQASGAQGMCIGQALDLAAENRAVTLEE 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A   GA+ A         +L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTE 235


>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
 gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
 gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
 gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
 gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
 gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
          Length = 296

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 136/236 (57%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+I ++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI+++A++ ++E+L  F +N+G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEG 230


>gi|260752677|ref|YP_003225570.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552040|gb|ACV74986.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 298

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 97/240 (40%), Positives = 148/240 (61%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M   L + +++ ++ ID +  + L      +      RL+ A+RYA + GGK++R  LV 
Sbjct: 1   MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVA 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LFNV+   ALRVG AIECIH YSLIHDD+P MDN  +RRGKPTVH  +D+ +A+++
Sbjct: 56  ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175
           G+ L   AFEI+S  K     ++R +L+ +L    G  GM+GGQ +D+  E      D  
Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLP 175

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +Q++KTGAL  F  E+GAIM   +++ ++RL+ +  ++G+ FQ+ADDL+D E D  
Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235


>gi|153802298|ref|ZP_01956884.1| geranyltranstransferase [Vibrio cholerae MZO-3]
 gi|124122180|gb|EAY40923.1| geranyltranstransferase [Vibrio cholerae MZO-3]
          Length = 294

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 126/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G+QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMIQALAEASGVQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|14590908|ref|NP_142981.1| geranylgeranyl pyrophosphate synthetase [Pyrococcus horikoshii OT3]
 gi|90108478|pdb|1WY0|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate
           Synthetase From Pyrococcus Horikoshii Ot3
 gi|3257488|dbj|BAA30171.1| 342aa long hypothetical geranylgeranyl pyrophosphate synthetase
           [Pyrococcus horikoshii OT3]
          Length = 342

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 17/238 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
             L ++++E +K ID  + +L+ +    +       L  A R Y L GGK++R F+V   
Sbjct: 5   EELFARIKEKAKLIDEKIFELIPEKDPRV-------LYEAARHYPLAGGKRVRPFVVLTS 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 + L A+    AIE IH YSL+HDD+  MD    RRGKPTVH  +    AI+AG+
Sbjct: 58  TEAVGGDPLRAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHRIWGVNMAILAGD 115

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
            L + AFE ++  +   +   R   ++    N     +  GQ  D++ E    +   +  
Sbjct: 116 LLFSKAFEAVARAEIPPEKKARVLEVIVKASN----ELCEGQARDLEFEKKSTVTIEEYM 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   KTGAL   + + G I+   ++   + L  +G N+GI FQ+ DD+LD   D  K
Sbjct: 172 EMISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKK 229


>gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
 gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
          Length = 307

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 124/237 (52%), Gaps = 12/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
                +LQ+  + I+ +L+  L      ++      +  A+ Y++  GGK++R  L+ E 
Sbjct: 10  SQFMEELQQKVEHINNVLEKFLP-----VEEGQQRIIFEAMNYSVRAGGKRLRPILMEET 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +F  +        AAIE IH YSL+HDDLP+MDN   RRGK T H  Y E   I+AG+
Sbjct: 65  YHMFGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGD 124

Query: 122 GLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDET 175
            LL  A+E  +     ++ D   ++    L    G+ GM+GGQ++D++ E      I   
Sbjct: 125 ALLNLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITRE 184

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++  I ++KTGAL+  +   GAI+A AS +E  R+      LG+ FQ+ DD+LD   
Sbjct: 185 KLDFIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTS 241


>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 299

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 121/237 (51%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
            +   +     R++  LD  +       +T H  RL  A+RY AL GGK++R  LV    
Sbjct: 5   NMEQHISALRARLEQALDRWIP-----AETTHPARLHEAMRYSALGGGKRVRPVLVYGAG 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
               V          A+E IH YSLIHDDLP+MDN  +RRGKPT H  +DE  AI+AG+ 
Sbjct: 60  QALGVAPERLDGPACAVELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDA 119

Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
           +   AF+I+S  P        R ++M +L    G +GM GGQ +D     + +D  Q+  
Sbjct: 120 MQALAFQILSMDPDMLDDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLED 179

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   KTGAL+  +   GA+ A    +   E L  F + +G+ FQ+ DD+LD E D  
Sbjct: 180 MHVHKTGALIRASVLLGALSAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTA 236


>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Oceanobacter sp. RED65]
 gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Oceanobacter sp. RED65]
          Length = 294

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 125/213 (58%), Gaps = 3/213 (1%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           +L+    +      RL  A+ Y+LL GGK++R  +V       + +   A +   A+E I
Sbjct: 17  ILKADYVLPNVDAQRLKDAMTYSLLNGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMI 76

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H YSL+HDDLP+MD+  +RRG+PT HI +DE TAI+AG+ L T AF+++  P   +    
Sbjct: 77  HAYSLVHDDLPAMDDDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQ 136

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           + +++ +L H  GL GM GGQ LD++  D+ +D   +  +   KTGAL+  + + G + A
Sbjct: 137 QLRMVQTLAHASGLAGMAGGQSLDLEAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCA 196

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +AS+ +   L  + + +G+ FQ+ DD+LD   D
Sbjct: 197 NASEQQLSYLSVYAQAIGLAFQVQDDILDVISD 229


>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
 gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
          Length = 296

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L +  ++++  LD         +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 5   FDFKAYLGKAKEQVEAALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAA 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       AL    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+
Sbjct: 58  CELAGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE+++     +      +++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 118 ALLTRAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEY 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+     +GA++  A +   + LR +   +G+ FQ+ DD+LD   
Sbjct: 178 IHLHKTGALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITA 230


>gi|256845599|ref|ZP_05551057.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|256719158|gb|EEU32713.1| dimethylallyltransferase [Fusobacterium sp. 3_1_36A2]
          Length = 297

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 13/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
                L+E +   +T L   L + +      + + +   + YA L GGK++R FL+    
Sbjct: 3   DFQVYLKEKTDFFETELKKELKELS------YPETIAKGMEYAILNGGKRLRPFLLFATL 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L N N    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ G+ 
Sbjct: 57  ELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF ++S    +   + +   ++S T    G+ GM+GGQM+DI+ E   I    +  
Sbjct: 117 LLTYAFYVLSQKNLEFLSSEQLVNIISKTSEYAGINGMIGGQMIDIESENKKIGLETLKY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I   KTG L+    E   I+A+  +++++ L  + + +G+ FQ+ DD+LD E    DL K
Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKRKVLEEYADLIGLAFQVKDDILDIEGTFEDLGK 236


>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
           thaliana]
          Length = 306

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 80/226 (35%), Positives = 124/226 (54%), Gaps = 10/226 (4%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D+ +    S  +      +  A+RY+LL GGK++R  L      L   +  TA+    A+
Sbjct: 21  DNSISSVKSLKKRTEPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 80

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  AFE ++   + L 
Sbjct: 81  EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLV 140

Query: 140 DNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKMKTGALMCFAC 193
            + R  + ++ L   IG +G++ GQ++D+  E ++       ++  I   KT AL+  A 
Sbjct: 141 ASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAA 200

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             GAIM   ++ E E+LR +   +G++FQ+ DD+LD     E+L K
Sbjct: 201 VIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK 246


>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
 gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
          Length = 296

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 123/233 (52%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L +  +R++  LD         +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 5   FDFKAYLGKAKERVEAALD-------GSLGPERPESLREAMRYSLLAGGKRLRPILCLAA 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       AL    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+
Sbjct: 58  CELAGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE+++     +      +++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 118 ALLTRAFEMVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEY 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+     +GAI+  A +   + LR +   +G+ FQ+ DD+LD   
Sbjct: 178 IHLHKTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITA 230


>gi|254173046|ref|ZP_04879720.1| bifunctional short chain isoprenyl diphosphate synthase
           [Thermococcus sp. AM4]
 gi|214033202|gb|EEB74030.1| bifunctional short chain isoprenyl diphosphate synthase
           [Thermococcus sp. AM4]
          Length = 343

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 121/237 (51%), Gaps = 17/237 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECA 62
            L ++++  +K +D I+ +L+ +           +L  A R Y L GGK++R F+V   A
Sbjct: 6   ELFTRIKNLAKDVDKIILELVPEKD-------PKKLYEAARHYPLAGGKRVRPFVVLRAA 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   AL   AA+E IH YSL+HDD+  MD   +RRG+PTVH  +    AI+AG+ 
Sbjct: 59  EAVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGVNMAILAGDL 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179
           L + AFE I+  +   +   R   +L  T N     +  GQ LDI+ E  DE    +   
Sbjct: 117 LFSKAFEAIAKAEVSPEKKARILEVLVKTSN----ELCEGQALDIEFETKDEVTVDEYLK 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +   KTGAL   +   GAI+   ++     L  +G N+GI FQ+ DD+LD   D  K
Sbjct: 173 MISGKTGALFDGSATIGAIVGTDNEEYIRALSKWGRNVGIAFQIWDDVLDLIADEEK 229


>gi|258624384|ref|ZP_05719332.1| geranyltranstransferase [Vibrio mimicus VM603]
 gi|258583346|gb|EEW08147.1| geranyltranstransferase [Vibrio mimicus VM603]
          Length = 294

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  E   +   +
Sbjct: 112 GDALQTLAFTILAEGSLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A          L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRTILPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
          Length = 298

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 82/239 (34%), Positives = 126/239 (52%), Gaps = 10/239 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             +   L+E +K ++  L + + + A        + L  A+ Y+LL GGK++R  L    
Sbjct: 2   EEIQRYLKEKAKSVEARLKEYMERPAGI-----PETLREAMAYSLLAGGKRLRPVLTLAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A     +   AL    A+E IH YSLIHDDLP+MD+   RRG PT H  Y E  AI+AG+
Sbjct: 57  AEALGGDEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGD 116

Query: 122 GLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
            LLT AF++++      +L       L+       G +GM+GGQ+ DIQ E   +   ++
Sbjct: 117 ALLTRAFDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEEL 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I + KTG L+  +   GA++  + ++E + L  + E LG+ FQ+ DD+LD   D  K
Sbjct: 177 QDIHRSKTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQK 235


>gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305]
 gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305]
          Length = 299

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 86/238 (36%), Positives = 136/238 (57%), Gaps = 11/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            L + L    +R++  ++  L Q ++H     +  L+ A+ YA LLGGK++R FL+    
Sbjct: 6   ELKTDLVTFQQRVNQFIEQELKQYSAH-----HSPLIDAMAYAVLLGGKRVRPFLIYATG 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +  V+        AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+AG+ 
Sbjct: 61  RMLGVSLKALDHSAAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDS 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
           L T+AFE+I+     L D  + + + SL    G +GM  GQ LD   +++ I  +++ +I
Sbjct: 121 LQTFAFELIAK-DPFLTDLQKIKQIQSLAKAAGAKGMCLGQSLDLISENKAISLSELELI 179

Query: 181 QKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KTGAL+  +   G  ++     +  K  L C+ + +G+ FQ+ DD+LD   D  K
Sbjct: 180 HRNKTGALIVASVLMGFNLSDYAQDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDK 237


>gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202]
 gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202]
          Length = 299

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 85/238 (35%), Positives = 136/238 (57%), Gaps = 11/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            L + L    +R++  ++  L Q ++     ++  L+ A+ YA LLGGK++R FL+    
Sbjct: 6   ELKTDLVTFQQRVNQFIEQELKQYSA-----YHSPLIDAMAYAVLLGGKRVRPFLIYATG 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +  V+        AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+AG+ 
Sbjct: 61  RMLGVSLEALDHSAAAMESIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILAGDS 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
           L T+AFE+I+     L D  + + + SL    G +GM  GQ LD   +++ I  +++ +I
Sbjct: 121 LQTFAFELIAK-DPFLTDLQKVKQIQSLAQAAGARGMCLGQSLDLISENKAISLSELELI 179

Query: 181 QKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KTGAL+  +   G  ++     +  K  L C+ + +G+ FQ+ DD+LD   D  K
Sbjct: 180 HRNKTGALIVASVLMGFNLSDYARDEKIKNALECYAKAIGLAFQVQDDILDVIGDTDK 237


>gi|167766573|ref|ZP_02438626.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
 gi|167711696|gb|EDS22275.1| hypothetical protein CLOSS21_01079 [Clostridium sp. SS2/1]
 gi|291558609|emb|CBL37409.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
           SSC/2]
          Length = 297

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN     ++++   +I+ ILD+ L       +T     +L+A+   +  GGK++R  L+ 
Sbjct: 1   MN--FKDEMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLIN 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +F           AAIE IH YSLIHDDLP++DN   RRG+ T HI Y E  AI+A
Sbjct: 54  ETYQMFGGKEDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 113

Query: 120 GNGLLTYAFEIISSP-KTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174
           G+ LL YA+E+ +       KD I    + +  L    G+ GM+GGQ+ D++ E   +  
Sbjct: 114 GDALLNYAYEVATKAFDLAEKDKIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSM 173

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            Q+  I K KT AL+      GA++A AS+ +  ++   GE +G+ FQ+ DD+LD   D 
Sbjct: 174 EQILFIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDE 233

Query: 235 P 235
            
Sbjct: 234 E 234


>gi|237744132|ref|ZP_04574613.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
 gi|229431361|gb|EEO41573.1| dimethylallyltransferase [Fusobacterium sp. 7_1]
          Length = 297

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 13/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
                L+E +   +T L   L + +      + + + + + YA L GGK++R FL+    
Sbjct: 3   DFQVYLKEKTDFFETELKKELKELS------YPETIANGMEYAILNGGKRLRPFLLFVTL 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L N +    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ G+ 
Sbjct: 57  ELLNEDIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDS 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF ++S    +L  + +   ++S T    G+ GM+GGQM+DIQ E   ID   +  
Sbjct: 117 LLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIQSENKKIDLETLKY 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I   KTG L+    E   I+A+  ++++E L  + + +G+ FQ+ DD+LD E    DL K
Sbjct: 177 IHSHKTGKLIKLPIEIACIIANVEKDKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGK 236


>gi|258515780|ref|YP_003192002.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 296

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 10/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              ++L++ + ++D  L+  LL  +S       + +  A+RY++  GGK++R  ++   A
Sbjct: 2   EFLNELKKIAGQVDAALNRYLLPESS-----CPEIIHRAMRYSIFAGGKRLRPAMLIAAA 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    +    A+E IH YSLIHDDLPSMD+   RRGKPT H  + E  AI+AG+ 
Sbjct: 57  EAVGGSADKVMPAACALELIHTYSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDA 116

Query: 123 LLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF 178
           LLT +F++++  S +  +      +++  ++   G  G++GGQ++DI   ++ ID   + 
Sbjct: 117 LLTMSFQLLAGLSGRNGIAPADVVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLE 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I   KTGAL   A  SGA+++ A   E + L  + E+ G+ FQ+ DD+LD   D+ K
Sbjct: 177 YIHTKKTGALFRAAIRSGAVLSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQK 234


>gi|319409361|emb|CBI83005.1| geranyltranstransferase [Bartonella schoenbuchensis R1]
          Length = 300

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 107/228 (46%), Positives = 152/228 (66%), Gaps = 3/228 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
           + L +++  I+  LD LL   A + +    + L+ A+R+  L GGK++R FLV + A+LF
Sbjct: 6   ALLAKHTHNIEKRLDTLLNYKAQNNEIARPEILIKAMRHGTLNGGKRLRPFLVIQSAALF 65

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           ++    +L +G A+EC+HCYSLIHDDLP+MDN  +RRGKPTVH  ++E TAI+AGN LLT
Sbjct: 66  DIPLEQSLDIGVALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFNEATAILAGNALLT 125

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKM 183
            AFEII+     L   IR  L+ +L    GL GMLGGQMLD++ E   +    +  +Q M
Sbjct: 126 LAFEIIAHKACALSPQIRIDLITALAQAAGLGGMLGGQMLDLEAENKPQDHHAIITLQHM 185

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           KT AL+ FAC++GAI+ +AS+ + ++L  FG +LG+ FQL DDLLD  
Sbjct: 186 KTAALISFACQAGAIIGNASKTQIDQLSTFGTHLGLAFQLTDDLLDVT 233


>gi|14521122|ref|NP_126597.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Pyrococcus abyssi GE5]
 gi|5458339|emb|CAB49828.1| idsA-like multifunctional short chain isoprenyl diphosphate
           synthase [Pyrococcus abyssi GE5]
          Length = 346

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 78/238 (32%), Positives = 117/238 (49%), Gaps = 17/238 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
             L ++++E +K +D  L +L+ +       +    L  A R Y L GGK+IR F+V   
Sbjct: 9   DELFNRIKERAKLVDEKLFELIPE-------KEPKVLYEAARHYPLAGGKRIRPFVVLTA 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 N L A+    AIE IH YSL+HDD+  MD    RRGKPTVH  +    AI+AG+
Sbjct: 62  TEAVGGNALKAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHKVWGINMAILAGD 119

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            L + AFE IS  +   +   +    +    N     +  GQ LD++ E    +   +  
Sbjct: 120 LLFSKAFEAISRAEISPEKKAKVLETIVKASN----ELCEGQALDLEFENREMVSIEEYM 175

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   KTGAL   + + G I+   ++   E L  +G N+G+ FQ+ DD+LD   D  K
Sbjct: 176 RMISGKTGALFDASAKVGGIVGTENEEYIEALSRWGRNVGMAFQIWDDVLDLIADEEK 233


>gi|329737240|gb|EGG73494.1| geranyltranstransferase [Staphylococcus epidermidis VCU028]
          Length = 288

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 25  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 85  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHW 143

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 144 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 204 HLGMMFQIKDDLLDVYGDESK 224


>gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 277

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 6/205 (2%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDL 92
            N  L  ++RY++  GGK+IR  LV   A         +  +V  ++E +H YSLIHDDL
Sbjct: 10  SNQILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDL 69

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRGKPT H ++ +  A++AG+GLLT +FE +S   T + ++ + +L+  L  
Sbjct: 70  PEMDNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLS--LTDIDNDKKIKLISQLAL 127

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G QGM+ GQ  DI  E    +  ++  +   KTGAL+ +AC +G I++ AS N+ E L
Sbjct: 128 AAGPQGMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELL 187

Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
           R +GEN G+ FQ+ DDLLD   D  
Sbjct: 188 RKYGENFGLAFQIYDDLLDVIGDAK 212


>gi|153216011|ref|ZP_01950233.1| geranyltranstransferase [Vibrio cholerae 1587]
 gi|124114524|gb|EAY33344.1| geranyltranstransferase [Vibrio cholerae 1587]
          Length = 294

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|27468120|ref|NP_764757.1| geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
 gi|251810934|ref|ZP_04825407.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
 gi|27315666|gb|AAO04801.1|AE016748_35 geranyltranstransferase [Staphylococcus epidermidis ATCC 12228]
 gi|251805614|gb|EES58271.1| geranyltranstransferase [Staphylococcus epidermidis BCM-HMP0060]
          Length = 293

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 30  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 90  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHW 148

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 149 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 209 HLGMMFQIKDDLLDVYGDESK 229


>gi|282876057|ref|ZP_06284924.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
 gi|281295082|gb|EFA87609.1| geranyltranstransferase [Staphylococcus epidermidis SK135]
          Length = 298

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 35  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 95  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHW 153

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 154 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 213

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 214 HLGMMFQIKDDLLDVYGDESK 234


>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
 gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
          Length = 301

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 12/243 (4%)

Query: 1   MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
           MN   P    + E   R+D+ L +L   +      +  + L  ++ Y+L+ GGK++R  L
Sbjct: 1   MNNRQPINQYMNEICDRLDSELTNLFPPS-----WKVPETLHKSMSYSLMAGGKRMRPLL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V         +   A+ V  A+E +H YSL+HDDLP+MD+   RRGKPT H  + E +AI
Sbjct: 56  VIAACEAGGGSRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHKVFGEASAI 115

Query: 118 IAGNGLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173
           +AG+ LLT+AF   I +S +  +       ++  L    G +GM+GGQ+ D++ E     
Sbjct: 116 LAGDALLTHAFYSIIQASRQFGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTT 175

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             Q+  I   KT  L+ F+  +G  +A  ++ + E LR FG ++G+ FQ+ DD+LD   D
Sbjct: 176 LEQLEYIHLHKTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQDDILDLVGD 235

Query: 234 LPK 236
             K
Sbjct: 236 ESK 238


>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 291

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 82/238 (34%), Positives = 128/238 (53%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +  + +   + ++  L   L +T        +D L  A+ Y+L+ GGK++R  L+   A 
Sbjct: 1   MKERWRARQEMVERALQAELDRTD-----VLDDTLRQAMAYSLMAGGKRLRPVLLMAAAD 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +    L V  A+E IH YSLIHDDLP+MDN   RRGK T H  + +  AI+AG+GL
Sbjct: 56  AVGGDGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT AF +I   +  +  +   +++  ++   G +GM+GGQ+LD++ E   I   ++  + 
Sbjct: 116 LTLAFTVILR-QQDVSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTGAL   A  SGAI+  AS+ +   L  + E  G+ FQ+ DD+LD      D+ K
Sbjct: 175 MGKTGALFRAALRSGAILGGASEAQLASLTTYAEQFGLAFQITDDILDVVGTAEDIGK 232


>gi|319899404|ref|YP_004159501.1| geranyltranstransferase [Bartonella clarridgeiae 73]
 gi|319403372|emb|CBI76931.1| geranyltranstransferase [Bartonella clarridgeiae 73]
          Length = 301

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 105/234 (44%), Positives = 154/234 (65%), Gaps = 4/234 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               + L +++  ++  LD LL   A + +    + L++A+R+  L GGK++R FLV + 
Sbjct: 2   HEFTTLLAKHAYNVEKRLDTLLSHKAQNGEITRPEILINAMRHGVLNGGKRLRPFLVIQS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A++F++    +L +G A+EC+HCYSLIHDDLP++DN  +RRGKPTVH+ +DE TAI+AGN
Sbjct: 62  AAIFDIPPEHSLDIGVALECLHCYSLIHDDLPALDNDTLRRGKPTVHVAFDEATAILAGN 121

Query: 122 GLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178
            LLT+AFEII+  +        +  L+ +LT   GL GM+GGQMLD++ E    DE+   
Sbjct: 122 ALLTFAFEIIAHKEAYSFSPKTKIDLITALTQAAGLGGMIGGQMLDLEAEKKPQDESATI 181

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +Q+MKT ALM FAC++GAIM  AS+   ++L  FG  +G+ FQL DDLLD   
Sbjct: 182 TLQQMKTAALMRFACQAGAIMGQASKTLTDKLASFGTQIGLAFQLTDDLLDLVS 235


>gi|90422021|ref|YP_530391.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
 gi|90104035|gb|ABD86072.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
          Length = 308

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 105/240 (43%), Positives = 147/240 (61%), Gaps = 5/240 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           ++     +L + +   + +L  LL       +     RL+ AIRY+ L GGK++R FLV 
Sbjct: 6   LSADFVQRLDQTADDTEALLARLLSDQLLPDEIARPRRLMEAIRYSSLAGGKRLRPFLVV 65

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A++F V    AL  GAA+ECIHCYSLIHDDLP+MDN  +RRG+PT+H  YD+ TAI+A
Sbjct: 66  ESAAVFGVPRGAALLAGAALECIHCYSLIHDDLPAMDNSELRRGRPTLHRAYDDATAILA 125

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175
           G+ LLT AF+II+  +      +R  L  +L    G+ GM+GGQMLD+  E      +  
Sbjct: 126 GDALLTLAFDIITRDEIHSDAGVRLALTRALARASGIGGMVGGQMLDLAGEGRFGDREPV 185

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            V  +Q+MKTGAL+ F C +GAI+  A++ + + L  +G  LG  FQ+ADDLLD E D  
Sbjct: 186 DVARLQQMKTGALLRFGCIAGAILGQATKEQTKALDDYGRALGEAFQIADDLLDVEGDAA 245


>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
 gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
          Length = 297

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 127/235 (54%), Gaps = 11/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   L+E    +D  L+  L +     + +    L  A+RY++  GGK++R  L+    
Sbjct: 2   DLKVYLKEKIALVDAALEQYLPK-----EEERPQSLHKAMRYSIFAGGKRVRPVLMLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    A+    A+E IH YSLIHDDLP+MD+   RRG+PT H  + E  AI+AG+G
Sbjct: 57  EAVGGQIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDG 116

Query: 123 LLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           LLT AF+++S P+    +    R  ++  +    G  GM+GGQ++D++ E    +D   V
Sbjct: 117 LLTEAFKLMSDPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPDMDLPTV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGAL+  +  +GA++  A   +   +R +GE  G+ FQ+ADD+LD E 
Sbjct: 177 QYIHAHKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIEG 231


>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
           [Deferribacter desulfuricans SSM1]
 gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
           [Deferribacter desulfuricans SSM1]
          Length = 300

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 88/243 (36%), Positives = 135/243 (55%), Gaps = 13/243 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           N  L + ++  ++R+D  + + L       + +    L+ ++RY++  GGK++R  L+  
Sbjct: 4   NFNLKNYIKFFAQRVDDWIRNYLT-----YENEQTIGLIESMRYSIFAGGKRLRPVLIYS 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F           AA+E +H YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG
Sbjct: 59  SYGIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAG 118

Query: 121 NGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           + LLT AFEI+        +      +    L  + G +GM+GGQ  DI +E   ID+  
Sbjct: 119 DALLTLAFEIMLDKDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNT 178

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EED 233
           +  I K KT AL+ + CE GAI+  A + +K+ L  FGE +G+ FQ+ DD+LD     E+
Sbjct: 179 LDFIHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEE 238

Query: 234 LPK 236
           L K
Sbjct: 239 LGK 241


>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 299

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 92/239 (38%), Positives = 129/239 (53%), Gaps = 10/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           N  L   LQ   +R +  L   L       Q   +  LL A++Y ALLGGK++R FL   
Sbjct: 3   NSSLLQLLQHYQERNNQQLTHWL-----DAQPFADQTLLKAMKYGALLGGKRVRPFLTYV 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             ++  VN        AAIECIH YSLIHDDLP+MD+  +RRG+PT HI +DE TA++AG
Sbjct: 58  TGNMLGVNEENLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAG 117

Query: 121 NGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
           + L T AFEI++     +  ++ R +++  L    G  GM  GQ   LD + + +  TQ+
Sbjct: 118 DALQTLAFEILAEGTLSIDGESQRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             I K KTGAL+  A   GA+ A         +L  + E +G+ FQ+ DD+LD   D  
Sbjct: 178 EQIHKHKTGALIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISDTE 236


>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
 gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
          Length = 296

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 136/236 (57%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MKIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+I ++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQIVMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI+++A++ ++E+L  F +N+G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSNATKEQEEKLLEFAKNIGLAFQIRDDILDVEG 230


>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
 gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
          Length = 293

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 14/242 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   ++ N  +I+  +  L+ +  + +       L  ++ Y+L  GGK+IR   V 
Sbjct: 1   MNEPLKYFIESNIPQIEETMFALVSKIDAPVD------LKDSMLYSLKAGGKRIRPLFVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L+  N    L VGA IE IH YSLIHDDLPSMDN   RRGKPT H  Y E  A +A
Sbjct: 55  AVLELYRKNLQDGLIVGAVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ L T AF I++  +  +    R +L+  L+   G +GM+GGQ+LD++ E   +D T++
Sbjct: 115 GDALNTLAFGILA--RMDVTAEKRIELVQLLSVAAGAEGMVGGQVLDMEGEQRQLDLTEL 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
             +   KTGAL+ F+ E+GA++A AS+ ++  L+ +  ++G+ FQ+ DD+LD E    +L
Sbjct: 173 EQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYAHHIGLAFQIQDDILDIEGTTEEL 232

Query: 235 PK 236
            K
Sbjct: 233 GK 234


>gi|84489654|ref|YP_447886.1| IdsA [Methanosphaera stadtmanae DSM 3091]
 gi|84372973|gb|ABC57243.1| IdsA [Methanosphaera stadtmanae DSM 3091]
          Length = 327

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 14/230 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+  ++ ID ++DD L +          + L  +  Y +  GGKK R  L          
Sbjct: 7   LKAYAEEIDVVIDDSLSKLE-------PESLYESSEYLIKAGGKKFRPALTLLSCQAVGG 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL+  AAIE  H +SLIHDD+  MDN   RRGKP VH  + E  AI+AG+ L   +
Sbjct: 60  KPEKALKAAAAIELTHTFSLIHDDI--MDNDDTRRGKPAVHKVWGEPLAILAGDSLFAKS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK 184
           FE++S          R    L +  N  +  +  GQ LD+  E    + + +   +   K
Sbjct: 118 FELLSQSAEDNIAYERVVDALQVLTNSCIN-ICEGQALDMAFEDTFNVTKDEYMNMIYKK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           TG L+  +   GAIM  AS NE + LR +G+ +G+ FQ+ DD +D   D 
Sbjct: 177 TGDLITASTTIGAIMGGASSNEIQALRTYGKQIGLAFQIQDDYIDLTGDE 226


>gi|229523313|ref|ZP_04412720.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TM 11079-80]
 gi|229339676|gb|EEO04691.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TM 11079-80]
          Length = 294

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGTLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|260776529|ref|ZP_05885424.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607752|gb|EEX34017.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 294

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 126/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M+  L S  Q N+++++  L+ L               L+ A+RY  LLGGK+ R FLV 
Sbjct: 1   MHEALTSLQQRNNRQLERWLNQL---------PHQEQPLIEAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKLEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++  +   +    R +++ +L    G  GM  GQ LD+  E   +   +
Sbjct: 112 GDALQTLAFTILADGELSPEAETYRIKMVKALAEASGANGMCLGQALDLSAEGQKVSLAE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A         +L  F + +G+ FQ+ DD+LD   D  
Sbjct: 172 LENIHRNKTGALMKCAIRLGALAAGQKGSEILPQLDQFADAIGLAFQVQDDILDIISDTE 231


>gi|302879474|ref|YP_003848038.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
 gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
          Length = 297

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 78/238 (32%), Positives = 119/238 (50%), Gaps = 8/238 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M     +   E     + +L  +L Q           RL  A+RYA+L GGK++R  L  
Sbjct: 2   MTADFSAWAAERQAAFEEVLRRVLPQ-----PEVSPQRLHQAMRYAVLEGGKRVRPLLAF 56

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   +      V A++E IH YSL+HDD+P MD+  +RRGKPT H+QYDE TA++ 
Sbjct: 57  AAGELTGADIARVDIVAASVELIHAYSLVHDDMPCMDDDVLRRGKPTCHVQYDEATALLV 116

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
           G+ L T AF++++  +       +  ++  L    G +GM GGQ   LD   + +   ++
Sbjct: 117 GDSLQTLAFQLLTEHRLSDGPQQQMAMIRLLASASGSRGMAGGQAIDLDSVGKSLTLPEL 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTGAL+  A   GA     S  +   L  + + +G+ FQ+ DD+LD E D  
Sbjct: 177 ENMHIHKTGALIRAAVLLGAQCGAVSPVQLACLDHYAKCVGLAFQVVDDVLDAEADTA 234


>gi|317498984|ref|ZP_07957266.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893733|gb|EFV15933.1| polyprenyl synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 297

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 82/241 (34%), Positives = 128/241 (53%), Gaps = 13/241 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN     ++++   +I+ ILD+ L       +T     +L+A+   +  GGK++R  L+ 
Sbjct: 1   MN--FKDEMKQKVAQIEIILDEYLPAQEGLQKT-----VLTAMNTTVKAGGKRLRPMLIN 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +F           AAIE IH YSLIHDDLP++DN   RRG+ T HI Y E  AI+A
Sbjct: 54  ETYQMFGGKGDIVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGQKTCHIVYGEDMAILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNI---RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174
           G+ LL YA+E+ +      + +      + +  L    G+ GM+GGQ+ D++ E   +  
Sbjct: 114 GDALLNYAYEVATKAFDLAEKDQIMNVVEAIKILASKPGIYGMIGGQVADVELEGTPLSM 173

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            Q+  I K KT AL+      GA++A AS+ +  ++   GE +G+ FQ+ DD+LD   D 
Sbjct: 174 EQILFIHKNKTSALIEACMMIGAVLAGASKEDVLKMEECGEYIGLAFQIQDDILDLTGDE 233

Query: 235 P 235
            
Sbjct: 234 E 234


>gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 288

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 89/236 (37%), Positives = 137/236 (58%), Gaps = 14/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            +   L++ ++ I+T L +L+ +            L  A+ Y+L  GGK+IR  L+ E +
Sbjct: 3   DIKIYLKQKAELINTYLKNLIPK-------GTPKELFDAMEYSLTVGGKRIRPILIIESS 55

Query: 63  SLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              N  V+    + V  ++E IH YSLIHDDLP+MD+  +RRGKPT H  + E  AI+AG
Sbjct: 56  KAVNPDVDIEDFIDVALSVEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAG 115

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +GLLTYAFE+IS  +    D +  +++  +++++G+ GM+GGQ  DI + F D   +  I
Sbjct: 116 DGLLTYAFELISGNQKITPDKLL-KVINVISNSVGVYGMVGGQAGDILENFKD---IDFI 171

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KT   +   C+ G I+A AS+ E E L+ +G  +GI FQ+ DD+LD   D  K
Sbjct: 172 HTHKTAKFISGCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEEK 227


>gi|163869177|ref|YP_001610429.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
 gi|161018876|emb|CAK02434.1| geranyltranstransferase [Bartonella tribocorum CIP 105476]
          Length = 301

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 106/233 (45%), Positives = 152/233 (65%), Gaps = 3/233 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               + L ++   +++ L  LL     + +    + L+ A+RY  L GGK++R FLV + 
Sbjct: 2   HEFTTLLAKHGHTVESRLSTLLSDHIQNGEISRPENLIKAMRYGVLNGGKRLRPFLVIQS 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF++    +L V  A+EC+HCYSLIHDDLP+MDN  +RRGKPTVH+++DE TAI+AGN
Sbjct: 62  AALFDIPVEHSLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTVHVEFDEATAILAGN 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
            LLT+AFEII+     L  + R +L+ +L  + GL GMLGGQMLD++ E   +    +  
Sbjct: 122 ALLTFAFEIIAHKANTLSTDTRIKLITALAQSAGLGGMLGGQMLDLEAEKKPQENTDIIT 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q+MKT AL+ FAC++GAI+ +ASQ    +L  FG  LG+ FQL DDLLD   
Sbjct: 182 LQRMKTAALISFACQAGAIIGNASQELLTKLTAFGSYLGLAFQLTDDLLDVTA 234


>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
          Length = 345

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 19/246 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
           +    S +   +K ++  L++ +      +      ++  A+RY LL  GK++R  L   
Sbjct: 47  DFKFMSYMVNKAKSVNKALEEAVPLREPEL------KIREAMRYTLLSDGKRVRPMLCLA 100

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TA+    AIE +H  SLI DDLP MDN  +RRGKPT HI + E  AI+A 
Sbjct: 101 ACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILAS 160

Query: 121 NGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD------IQDEFID 173
             L+  A +   SS    +      + +  +   +  +G++ GQ  D        D    
Sbjct: 161 QALIALAVQKTTSSTFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTG 218

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231
              +  I   KT AL+  A   GAIM   S  E ERLR +   +G++FQ+ DD+LD    
Sbjct: 219 LEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKS 278

Query: 232 -EDLPK 236
            E+L K
Sbjct: 279 SEELGK 284


>gi|163816790|ref|ZP_02208153.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759]
 gi|158448047|gb|EDP25042.1| hypothetical protein COPEUT_02980 [Coprococcus eutactus ATCC 27759]
          Length = 313

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 9/234 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   + E ++RID I+   L +     +T     +  A+ Y++  GGK++R  L+ E  
Sbjct: 20  SLDKAIAERAERIDGIVAGYLPKVEGFPRT-----VCEAMAYSVEAGGKRLRPMLMEETY 74

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +        AAIE IH YSLIHDDLP++DN   RRG+ T H+ + E  AI+AG+ 
Sbjct: 75  RMLGGSTDVVKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRQTSHVVFGEAMAILAGDA 134

Query: 123 LLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179
           LL YA+E         +D  + S+ +  L    G+ GMLGGQ++D++     +   Q+  
Sbjct: 135 LLNYAYETACKAFDLDEDARKVSEALRILARKPGVYGMLGGQVVDVEMTGRTLTREQLEY 194

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KTGAL+  +   GA++A A   + E +     ++G+ FQ+ DD+LD   D
Sbjct: 195 VYENKTGALIEASMMIGAVLAGADSEQVEAVEKIASDIGMAFQVQDDILDVCGD 248


>gi|121588137|ref|ZP_01677884.1| geranyltranstransferase [Vibrio cholerae 2740-80]
 gi|121728346|ref|ZP_01681376.1| geranyltranstransferase [Vibrio cholerae V52]
 gi|147674651|ref|YP_001216368.1| geranyltranstransferase [Vibrio cholerae O395]
 gi|153817233|ref|ZP_01969900.1| geranyltranstransferase [Vibrio cholerae NCTC 8457]
 gi|227081066|ref|YP_002809617.1| geranyltranstransferase [Vibrio cholerae M66-2]
 gi|229505505|ref|ZP_04395015.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae BX 330286]
 gi|262168689|ref|ZP_06036384.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC27]
 gi|298498988|ref|ZP_07008795.1| geranyltranstransferase [Vibrio cholerae MAK 757]
 gi|121547628|gb|EAX57727.1| geranyltranstransferase [Vibrio cholerae 2740-80]
 gi|121629401|gb|EAX61831.1| geranyltranstransferase [Vibrio cholerae V52]
 gi|126512267|gb|EAZ74861.1| geranyltranstransferase [Vibrio cholerae NCTC 8457]
 gi|146316534|gb|ABQ21073.1| geranyltranstransferase [Vibrio cholerae O395]
 gi|227008954|gb|ACP05166.1| geranyltranstransferase [Vibrio cholerae M66-2]
 gi|227012710|gb|ACP08920.1| geranyltranstransferase [Vibrio cholerae O395]
 gi|229357728|gb|EEO22645.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae BX 330286]
 gi|262022807|gb|EEY41513.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC27]
 gi|297543321|gb|EFH79371.1| geranyltranstransferase [Vibrio cholerae MAK 757]
          Length = 294

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 297

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 134/241 (55%), Gaps = 11/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L + L    +RI+  L + L  T S         L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MSYLLATDLTHLQQRINHFLAEKLKTTDS-----VGSPLVEAMAYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V         AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L ++AFE++++    L D  +   +  L    G +GM  GQ LD   +++ +   ++
Sbjct: 116 GDALQSFAFELLAT-DPHLTDREKVAQVTELATASGAKGMCLGQSLDLIAENKAVSLEEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +I + KTGAL+  +   G  ++  SQN   K+ L  + + +G+ FQ+ DD+LD   D  
Sbjct: 175 ELIHRNKTGALILSSVMMGLNLSEHSQNLAIKQPLVNYAKAIGLAFQVQDDILDVIGDTD 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|15231055|ref|NP_188651.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75273683|sp|Q9LJY2|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
           mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
           AltName: Full=Dimethylallyltranstransferase 10; AltName:
           Full=Farnesyl diphosphate synthase 10; AltName:
           Full=Farnesyltranstransferase 10; AltName:
           Full=Geranyltranstransferase 10; Flags: Precursor
 gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
           synthetase/farnesyltranstransferase [Arabidopsis
           thaliana]
 gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
          Length = 344

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 76/246 (30%), Positives = 114/246 (46%), Gaps = 19/246 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
           +    S +   +K ++  L++ +      +      ++  A+RY LL  GK++R  L   
Sbjct: 47  DFKFMSYMVNKAKSVNKALEEAVPLREPEL------KIREAMRYTLLSDGKRVRPMLCLA 100

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TA+    AIE +H  SLI DDLP MDN  +RRGKPT HI + E  AI+A 
Sbjct: 101 ACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILAS 160

Query: 121 NGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD------IQDEFID 173
             L+  A +   SS    +      + +  +   +  +G++ GQ  D        D    
Sbjct: 161 QALIALAVQKTTSSTFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTG 218

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231
              +  I   KT AL+  A   GAIM   S  E ERLR +   +G++FQ+ DD+LD    
Sbjct: 219 LEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKS 278

Query: 232 -EDLPK 236
            E+L K
Sbjct: 279 SEELGK 284


>gi|153830561|ref|ZP_01983228.1| geranyltranstransferase [Vibrio cholerae 623-39]
 gi|148873959|gb|EDL72094.1| geranyltranstransferase [Vibrio cholerae 623-39]
          Length = 294

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|18977474|ref|NP_578831.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
           furiosus DSM 3638]
 gi|18893173|gb|AAL81226.1| bifunctional short chain isoprenyl diphosphate synthase [Pyrococcus
           furiosus DSM 3638]
          Length = 340

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 77/240 (32%), Positives = 113/240 (47%), Gaps = 17/240 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT 59
           M   L  K++E +K +D  L  L+ +       +    L  A R Y L GGK++R F+V 
Sbjct: 1   MYDELFKKIKEKAKFVDEKLLSLIPE-------KEPKILYEAARHYPLAGGKRVRPFVVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                       A+    AIE IH YSL+HDD+  MD    RRG+PTVH  +    AI+A
Sbjct: 54  TATEAVGGEWEKAIYPAVAIELIHNYSLVHDDIMDMDE--TRRGRPTVHKVWGINMAILA 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176
           G+ L + AFE IS  +   +   R    +    N     +  GQ +D++ E  D     +
Sbjct: 112 GDLLFSKAFEAISRAEIPPEKKARVLETVVKASN----ELCEGQAMDLEFEKRDTVTIEE 167

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +   KTGAL   + + G I+   ++     L  +G N+GI FQ+ DD+LD   D  K
Sbjct: 168 YMRMISGKTGALFDASAKVGGIVGTDNEEYINALSTWGRNVGIAFQIWDDVLDLIADEEK 227


>gi|167758090|ref|ZP_02430217.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
 gi|167663987|gb|EDS08117.1| hypothetical protein CLOSCI_00428 [Clostridium scindens ATCC 35704]
          Length = 314

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 124/233 (53%), Gaps = 10/233 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + ++++   ++I+ IL + L +            ++ A+ Y+LL GGK++R  L+ E   
Sbjct: 21  MQAQMKHKVEKIEGILTEYLPRQEG-----FQSIIMEAMNYSLLAGGKRLRPMLMNETYR 75

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF           AAIE IH YSL+HDDLP+MDN   RRG+ T HI Y E   I+AG+ L
Sbjct: 76  LFGGESPLIRPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDAL 135

Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
           L YAFE          +   +  + +  L    G+ GM+GGQ++D+++    I +  +  
Sbjct: 136 LNYAFETAFKAFVMEPEESLLIGRALGVLGEKAGIYGMIGGQVIDVKETGHSIPKEVLDT 195

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I ++KT AL+  +   GAI+  AS+ E + +      +GI FQ+ DD+LD   
Sbjct: 196 IYELKTSALIEASMMVGAILGGASEEEVKIIEKIARYVGIAFQIQDDILDVTS 248


>gi|120599627|ref|YP_964201.1| polyprenyl synthetase [Shewanella sp. W3-18-1]
 gi|120559720|gb|ABM25647.1| farnesyl-diphosphate synthase [Shewanella sp. W3-18-1]
          Length = 293

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 95/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S +QE   R+DT L                 +L +A++Y ALLGGK+IR FLV     
Sbjct: 2   LASTIQEYQLRVDTQLKQRFSTLE-----DTAPQLKAAMQYGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVTLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++     +       ++ +L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKQIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I  +A +++ + +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAVNAPKDQYQTMMTFAHAVGLAFQVQDDILDIIATTEELGK 234


>gi|238898686|ref|YP_002924367.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466445|gb|ACQ68219.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 312

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 82/240 (34%), Positives = 129/240 (53%), Gaps = 10/240 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           +     +L +  KR++T L   L +        +N  LL  +RY+ L+GGK++R +LV  
Sbjct: 13  SFDFDQQLSKYQKRVETYLSSALDKL-----PAYNTVLLDVMRYSTLMGGKRLRPYLVYA 67

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +  ++        AAIECIH YSL+HDDLPSMDN  +RRG+ T H+++ E  AI+AG
Sbjct: 68  TGQMLGLSLSNLDAPAAAIECIHSYSLLHDDLPSMDNDDLRRGELTGHVKFGEANAILAG 127

Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
           + L + AF I++  +   +    R  ++  L    G  GM GGQ LD+  E++D     +
Sbjct: 128 DSLQSLAFSILADDRMPDVVTEDRLAMLSELARASGATGMCGGQALDMASEYLDISLETL 187

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +I   KTGAL+  A   GA+ A  +       L  + +++G+ FQ+ DD+LD   +  K
Sbjct: 188 ELIHHHKTGALLRAAVRLGALAAGETGRKALPWLDQYAKSIGLAFQVQDDILDEIGEARK 247


>gi|283797528|ref|ZP_06346681.1| geranyltranstransferase [Clostridium sp. M62/1]
 gi|291074897|gb|EFE12261.1| geranyltranstransferase [Clostridium sp. M62/1]
          Length = 298

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 12/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L  +L + ++  + I+   L Q     +T H   +  A+ Y++  GGK++R  L+ E  
Sbjct: 2   ELKEQLLQYTRETEEIVFSYLPQ-----ETGHQKTIFEAMNYSVRAGGKRLRPLLMREVY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AAIE IH  SLIHDDLP MDN   RRGK T  + Y    A++AG+ 
Sbjct: 57  RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           LL YA E  S       D + +    + +  L+   G+ GM+GGQ +D++  ++ +   +
Sbjct: 117 LLIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I ++KTGAL+  +   GA++A AS+ E + +     N+G+ FQ+ DD+LD   
Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTG 232


>gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
 gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
          Length = 294

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 9/232 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +  +L ++++ ++ ++   L     H +T     +  A+ Y++  GGK++R  L+ E   
Sbjct: 2   MNEQLLQSTEEVEQVIYSYLPAEEGHQKT-----IFEAMNYSVKAGGKRLRPLLMREVYR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF           AAIE IH  SLIHDDLP MDN   RRGK T  + Y    A++AG+ L
Sbjct: 57  LFGGTGKEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
           L YA E  +       ++ R  + +  L    G+ GM+GGQ +D++  D+ I + ++  I
Sbjct: 117 LIYAIETAARAFQMTDNSQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLDFI 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++KTGAL+  A   GA+MA AS  E E +      +G+ FQ+ DD+LD   
Sbjct: 177 YRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTS 228


>gi|254285563|ref|ZP_04960527.1| geranyltranstransferase [Vibrio cholerae AM-19226]
 gi|150424425|gb|EDN16362.1| geranyltranstransferase [Vibrio cholerae AM-19226]
          Length = 294

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
 gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
          Length = 315

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 124/233 (53%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L      +++ LD       + +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 20  FDFNAYLAARKAEVESALD-------ASLPPERPESLREAMRYSLLAGGKRLRPILCLAA 72

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+
Sbjct: 73  CELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGD 132

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE+++     +      Q++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 133 ALLTRAFEMVALRSPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLEY 192

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+     +GA++A A  +  + LR +   +G+ FQ+ DD+LD   
Sbjct: 193 IHLHKTGALLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTA 245


>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
 gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
          Length = 303

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 84/239 (35%), Positives = 131/239 (54%), Gaps = 16/239 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
             P  LQ   + ++ +LDDLL    +        RL  A+RYA+LGG K++R+ LV    
Sbjct: 7   AFPEWLQGRVQHVEDVLDDLLPPADA-----LPSRLHEAMRYAVLGGGKRVRAALVYAAG 61

Query: 63  SLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               V+        +  R  AA+E IH YSL+HDDLP MD+  +RRG+PT H+++DE TA
Sbjct: 62  QACPVSGSVLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATA 121

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174
           ++AG+ L   AF++++S    +   +  Q   SL    G QGM GGQ +D+      +  
Sbjct: 122 MLAGDALQPLAFDLLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSR 179

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++  +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D
Sbjct: 180 DELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTAD 238


>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
 gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
          Length = 306

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 6/236 (2%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L +   +  + I+  L   +   A          L  A+RYA+L GGK++R  LV   
Sbjct: 10  FTLSAWSAQQLETIEQALSRWV---ACPTDAPAPAGLGDAMRYAVLDGGKRLRPLLVMAA 66

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               N N   ALR   A+E IH YSL+HDD+P MDN  +RRGKPTVH+++ E  A++AG+
Sbjct: 67  CEAVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGD 126

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
            L   AFE ++     +    +++L   L    G QGM GGQ +D+    +  T  Q+  
Sbjct: 127 ALQALAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQLHE 186

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + ++KTGAL+  +   G     A    +  LR +G  +G+ FQ+ DD+LD   D  
Sbjct: 187 MHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSA 242


>gi|258621633|ref|ZP_05716665.1| geranyltranstransferase [Vibrio mimicus VM573]
 gi|258586105|gb|EEW10822.1| geranyltranstransferase [Vibrio mimicus VM573]
          Length = 294

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  E   +   +
Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALSAGEKGRAILPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
 gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
           Clip81459]
 gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
 gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
 gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
 gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 1816]
 gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes 220]
 gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
          Length = 293

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  S    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|153827049|ref|ZP_01979716.1| geranyltranstransferase [Vibrio cholerae MZO-2]
 gi|229513011|ref|ZP_04402477.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TMA 21]
 gi|229525505|ref|ZP_04414910.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae bv. albensis VL426]
 gi|254225115|ref|ZP_04918729.1| geranyltranstransferase [Vibrio cholerae V51]
 gi|262191492|ref|ZP_06049677.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae CT 5369-93]
 gi|297581274|ref|ZP_06943198.1| geranyltranstransferase [Vibrio cholerae RC385]
 gi|125622502|gb|EAZ50822.1| geranyltranstransferase [Vibrio cholerae V51]
 gi|149739090|gb|EDM53386.1| geranyltranstransferase [Vibrio cholerae MZO-2]
 gi|229339086|gb|EEO04103.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae bv. albensis VL426]
 gi|229349904|gb|EEO14858.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TMA 21]
 gi|262032640|gb|EEY51193.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae CT 5369-93]
 gi|297534590|gb|EFH73427.1| geranyltranstransferase [Vibrio cholerae RC385]
 gi|327483628|gb|AEA78035.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4]
          Length = 294

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|115522205|ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
 gi|115516152|gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
          Length = 308

 Score =  221 bits (564), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 109/237 (45%), Positives = 146/237 (61%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L + ++  +T L  LL       +     RL+ AIRY+ L GGK++R FLV E A
Sbjct: 9   DFAQRLDQTAEDTETQLASLLSDALLPDEIARPKRLMEAIRYSTLGGGKRLRPFLVVESA 68

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F V    AL VGAA+ECIHCYSLIHDDLPSMDN  +RRG+PT+H  YD+ TAI+AG+ 
Sbjct: 69  AVFGVPRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDA 128

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           LLT AF+IIS  +      +R  L  +L    G+ GM+GGQMLD+  E      +   V 
Sbjct: 129 LLTLAFDIISRDEIHPDAKVRLLLTRALARASGIGGMVGGQMLDLAGEGRFGDREPVDVA 188

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ F C +GA++  AS  + + L  +G  LG  FQ+ADDLLD E D  
Sbjct: 189 RLQQMKTGALLRFGCIAGALLGQASPQQYQALDDYGRALGEAFQIADDLLDVEGDAA 245


>gi|323495108|ref|ZP_08100195.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio brasiliensis LMG 20546]
 gi|323310659|gb|EGA63836.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio brasiliensis LMG 20546]
          Length = 294

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L  L            N  L+ A+RY  LLGGK+ R FLV 
Sbjct: 1   MQEALTSLQQRNNQQLDNWLQSL---------PHQNLPLIEAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKLEDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++  +     +N R +++  L    G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTILADGQLNPEAENYRIKMVKVLADASGANGMCMGQALDLAAENRNVSLQE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEIHRNKTGALMKSAIRLGALAAGEKGERVLPLLDQYADAIGLAFQVQDDILDIISDTE 231


>gi|15231869|ref|NP_188069.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
          Length = 284

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 80/222 (36%), Positives = 123/222 (55%), Gaps = 10/222 (4%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L T   +  +    +  A+RY+LL GGK++R  L      L   +  TA+    A+E IH
Sbjct: 3   LSTFRSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIH 62

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL  AFE ++   + L  + R
Sbjct: 63  TSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASER 122

Query: 144 -SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGA 197
             + ++ L   IG +G++ GQ++D+  E ++       ++  I   KT AL+  A   GA
Sbjct: 123 MIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGA 182

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           IM   ++ E E+LR +   +G++FQ+ DD+LD     E+L K
Sbjct: 183 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK 224


>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
 gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
          Length = 299

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
             +R   I ++ L +     +    +RL  A+RY+LL GGK++R  L  E A LF     
Sbjct: 9   RWERHRRIFEEYL-EGLRFTEEPALERLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPE 67

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L   AAIE IH YSLIHDDLP+MDN   RRG+PT H ++ E  AI+AG+     A  +
Sbjct: 68  RVLPSAAAIELIHTYSLIHDDLPAMDNDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTL 127

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTG 186
           I + + +     R  ++  L  + G+ GM+GGQ+LD+         D   +FMI + KTG
Sbjct: 128 I-TVRQEGTCEQRLGVVQELASSTGVNGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTG 186

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL+  +   GAI+A A +   E +  +   LG+ FQ+ DD+LD   
Sbjct: 187 ALIRSSARVGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVG 232


>gi|262165140|ref|ZP_06032877.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus VM223]
 gi|262024856|gb|EEY43524.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus VM223]
          Length = 294

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  E   +   +
Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAILPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|284006403|emb|CBA71639.1| geranyltranstransferase [Arsenophonus nasoniae]
          Length = 302

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 90/244 (36%), Positives = 128/244 (52%), Gaps = 13/244 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M      + Q    R++  L +   +        +  +L++A++Y ALLGGK++R FLV 
Sbjct: 1   MTLSFADQRQWVQNRVNKTLLNQFQRL-----PFNQSQLVAAMKYGALLGGKRLRPFLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + NV         AA+ECIH +SLIHDDLP+MDN  +RRG+PT HI + E  AI+A
Sbjct: 56  AIGDMLNVAVENLDVPAAAVECIHAFSLIHDDLPAMDNDNLRRGQPTCHISFGEAHAILA 115

Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF+I+S S    + D  R  ++  L    G  GM GGQ LD++ E   ID T 
Sbjct: 116 GDALQTLAFDILSRSAMPDVSDTYRLAMIAELATATGAAGMCGGQALDMESEGQQIDFTT 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
           +  I   KTGAL+  A    A+ A          L  +   +G++FQ+ DD+LD   D  
Sbjct: 176 LETIHHHKTGALIRAAIRMSALTAGNQGNKLLPLLDNYANAIGLLFQVHDDILDVTGDTD 235

Query: 234 -LPK 236
            L K
Sbjct: 236 ILGK 239


>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
 gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
          Length = 296

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 132/240 (55%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L   L    + I+  L   + +            L S++ Y+L  GGK++R  LV 
Sbjct: 1   MTSNLNEFLTTRKQTIEDYLFTYVQELTI------PKDLKSSMLYSLKAGGKRLRPVLVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              + +  N    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  Y E TA++A
Sbjct: 55  ALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLA 114

Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
           G+ LLT +F +I S   + +  + + +++  L  + G  GM+GGQ  D++ E   +   +
Sbjct: 115 GDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I   KTG L+ F+  +GA++A AS ++ E+LR F  ++GI FQ+ DD+LD E    K
Sbjct: 175 LEYIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEK 234


>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 306

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 10/229 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
              R++  LD  L +  +H       RL  A+RY AL GGK++R  LV            
Sbjct: 20  WRARVEQALDYWLPEAQTH-----PARLHQAMRYSALSGGKRLRPILVFATGQALGAAPT 74

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                  A+ECIH YSLIHDDLP+MD+  +RRG+PT H  +DE TAI+AG+ L T AF I
Sbjct: 75  LLDGPACAVECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHI 134

Query: 131 ISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           ++     +++   R +++  L    G +GM GGQ +D+      +D  Q+  +   KTGA
Sbjct: 135 LAHDPGGVQNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGA 194

Query: 188 LMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+  + + GA+ A    +   +RL  +G+ +G+ FQ+ DD+LD E +  
Sbjct: 195 LIRASVQLGALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVEGETE 243


>gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
 gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
          Length = 293

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 89/242 (36%), Positives = 137/242 (56%), Gaps = 14/242 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   ++ N+ +I+  +  L+ Q  +         L  ++ Y+L  GGK+IR   V 
Sbjct: 1   MNEPLKYFIESNTPQIEETMFSLVEQIDAPAD------LKESMLYSLKAGGKRIRPLFVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L+  N    L VG+ IE IH YSLIHDDLPSMDN   RRGKPT H  Y E  A +A
Sbjct: 55  AVLELYRENLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ L T AF I++  +  +    R +L+  L+   G +GM+GGQ+LD++ E   ++  ++
Sbjct: 115 GDALNTLAFGILA--RMDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAEL 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
             +   KTGAL+ F+ E+GA++A  S  ++  L+ +  ++G+ FQ+ DD+LD E    +L
Sbjct: 173 EQVHVNKTGALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEEL 232

Query: 235 PK 236
            K
Sbjct: 233 GK 234


>gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601]
 gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601]
          Length = 293

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 88/235 (37%), Positives = 131/235 (55%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   L+ + + +D   + LL +  + + T     L  A+RY+L  GGK+IR  L+     
Sbjct: 4   LEQFLKTSKQLVD---EQLLAEVDARVIT---PTLKKAMRYSLEAGGKRIRPILLFATLI 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     +  AA+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+GL
Sbjct: 58  SLRTELEKGKKTAAALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDATAILAGDGL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ 181
           LT AF ++S  +  L    R +L+     + G +GM+ GQ  DI  +D  +   ++  I 
Sbjct: 118 LTLAFSLLSEEEA-LPAESRVKLIQLFAEHAGPEGMVAGQQADIEAEDRSVTLEELAAIH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KTGAL+  A  +GAI+A+A     E+L  + +N+G+ FQ+ADD+LD   D  K
Sbjct: 177 RKKTGALLKSAVLAGAIIANADAETYEKLNIYADNIGVAFQIADDILDVVGDEQK 231


>gi|229530007|ref|ZP_04419397.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae 12129(1)]
 gi|229333781|gb|EEN99267.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae 12129(1)]
          Length = 294

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|295116024|emb|CBL36871.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
           SM4/1]
          Length = 298

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 12/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L  +L + ++  + I+   L Q     +T H   +  A+ Y++  GGK++R  L+ E  
Sbjct: 2   ELKEQLLQYTRETEEIVYSYLPQ-----ETGHQKTIFEAMNYSVRAGGKRLRPLLMREVY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AAIE IH  SLIHDDLP MDN   RRGK T  + Y    A++AG+ 
Sbjct: 57  RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           LL YA E  S       D + +    + +  L+   G+ GM+GGQ +D++  ++ +   +
Sbjct: 117 LLIYAVETASRAFLSGADPVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I ++KTGAL+  +   GA++A AS+ E + +     N+G+ FQ+ DD+LD   
Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTG 232


>gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
 gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
          Length = 293

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 86/228 (37%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  +    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|225025925|ref|ZP_03715117.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
 gi|224956711|gb|EEG37920.1| hypothetical protein EUBHAL_00161 [Eubacterium hallii DSM 3353]
          Length = 297

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 13/241 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +  +L +  ++I+  +D  L +     +T     +LSA+ Y++  GGK++R  L+ E  
Sbjct: 3   SIKEQLSKKIEKIEQTIDFYLPEEKGLQKT-----VLSAMNYSVKAGGKRLRPMLMAETY 57

Query: 63  SLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +F     + +    AAIE IH YSLIHDDLP++DN  +RRG PT HI++ E  AI+AG+
Sbjct: 58  EMFGGADSSVIEPFMAAIEMIHTYSLIHDDLPALDNDALRRGMPTAHIKFGEAMAILAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLD--IQDEFIDETQVF 178
            LL YAFE  +        +I++   L + T   G+ GM+GGQ +D   +++ I    + 
Sbjct: 118 ALLNYAFETAAKAFDGTNKDIQTAKALQILTRKPGIYGMIGGQTVDVEQENKAISFDTLM 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLP 235
            I   KT AL+  A   GA++A AS+ E   +      +GI FQ+ DD+LD     E++ 
Sbjct: 178 YIHNNKTAALIECAMMIGAVLAGASEKEVSMIEQIANKVGIAFQIEDDILDVVSTSEEIG 237

Query: 236 K 236
           K
Sbjct: 238 K 238


>gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 297

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 22/248 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           N      + +  + I+ +L   L +  S +           +RY+ L GGK++R  LV  
Sbjct: 3   NIDFKKYILQKVEYINLVLKKFLPKDNSVVSQG--------MRYSVLAGGKRLRPVLVIL 54

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A LF V     +    AIE +H YSLIHDDLP+MDN  +RRG    H ++ E  AI+ G
Sbjct: 55  AAELFGVKAENVIPAACAIEYLHTYSLIHDDLPAMDNDDLRRGISANHKKFGEAAAILCG 114

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------ 174
           + LLT +F +I+  K+  K+   ++ +  L +  G +GM+ GQ  DI +           
Sbjct: 115 DALLTESFSLITKSKSSEKN--INEAVRILAYYGGYKGMIAGQTEDILETGKWSKKNKIL 172

Query: 175 --TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              ++  IQ  KT ALM  + + GA++A A +   + L  +G+N GI FQ+ DD+LD   
Sbjct: 173 LGEKIKFIQIQKTAALMIASLKIGAVLAGADKEGLKALEVYGKNAGIAFQIVDDILDVYA 232

Query: 233 D---LPKK 237
           D   L K+
Sbjct: 233 DKKLLGKE 240


>gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
 gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
          Length = 296

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 74/227 (32%), Positives = 120/227 (52%), Gaps = 9/227 (3%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
             R +  L+ +L             RL  A+RYA+LGG K++R  LV         +   
Sbjct: 12  QARTERALEQVLPPADKP-----PKRLHEAMRYAVLGGGKRLRPLLVYSTGMALGASEAV 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                +A+E IH YSL+HDDLPSMDN  +RRG+PT H  +DE TA++ G+ L + AF I+
Sbjct: 67  LDAPASAVELIHAYSLVHDDLPSMDNDDLRRGRPTCHKAFDEATALLVGDALQSLAFRIL 126

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189
           +   + L  + + ++++ L      +GM GGQ +D++   + +   ++  + ++KTGAL+
Sbjct: 127 ADSTSGLPASNQIKMLMLLAEAASSRGMAGGQAIDLESVGQLLTLAELETMHRLKTGALI 186

Query: 190 CFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   GA        +  E L  F + +G+ FQ+ DD+LD E D  
Sbjct: 187 RASVLLGAWCHPTIDPHTLENLDRFAQCIGLAFQIQDDVLDVESDTA 233


>gi|15640906|ref|NP_230537.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|153823688|ref|ZP_01976355.1| geranyltranstransferase [Vibrio cholerae B33]
 gi|229510825|ref|ZP_04400304.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae B33]
 gi|229517946|ref|ZP_04407390.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC9]
 gi|229608524|ref|YP_002879172.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae MJ-1236]
 gi|254848025|ref|ZP_05237375.1| geranyltranstransferase [Vibrio cholerae MO10]
 gi|255744681|ref|ZP_05418632.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholera CIRS 101]
 gi|262161186|ref|ZP_06030297.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae INDRE 91/1]
 gi|9655345|gb|AAF94052.1| geranyltranstransferase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126518791|gb|EAZ76014.1| geranyltranstransferase [Vibrio cholerae B33]
 gi|229344661|gb|EEO09635.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC9]
 gi|229350790|gb|EEO15731.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae B33]
 gi|229371179|gb|ACQ61602.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae MJ-1236]
 gi|254843730|gb|EET22144.1| geranyltranstransferase [Vibrio cholerae MO10]
 gi|255737712|gb|EET93106.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholera CIRS 101]
 gi|262028936|gb|EEY47589.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae INDRE 91/1]
          Length = 294

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   +
Sbjct: 112 GDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|254829880|ref|ZP_05234535.1| hypothetical protein Lmon1_00925 [Listeria monocytogenes 10403S]
          Length = 293

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  +    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGAL 188
           ++     L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDDN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + +A  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
 gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
          Length = 322

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 8/239 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
           L + +   +  ++  L   L   +        DRL  A+RYA+LGG K++R  LV     
Sbjct: 21  LQAWMHACAAHVEEALAARLPGPSGQAPGLAPDRLHEAMRYAVLGGGKRVRPLLVYAAGE 80

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +         A+E IH YSL+HDD+P+MDN  +RRGKPTVH QY E  A++ G+ L
Sbjct: 81  LVGADARVLDGAACAVELIHVYSLVHDDMPAMDNDDMRRGKPTVHRQYGEAMAMLVGDAL 140

Query: 124 LTYAFEIISSPKTQLKDNI----RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
              AFE++ +P  +          + ++  L    G  GM GGQ LDI+     +   Q+
Sbjct: 141 QALAFEVLVAPLVEADPQAARVPAATMVAVLARAAGSWGMAGGQALDIEGVGLRLSRPQL 200

Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + + KTGA++  + E G +     S +  E ++ +G  +G+ FQ+ DD+LD   D  
Sbjct: 201 EAMHRAKTGAMLSVSVELGLLAGGQPSADLAEAMQRYGRAIGLAFQVVDDILDVTADSA 259


>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
           2396]
 gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
           2396]
          Length = 299

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 10/236 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
              L    Q N  +ID  L +LL +           RL  A+ Y  L GGK++R  L+  
Sbjct: 5   TDSLDDFFQRNRAQIDQALANLLPEPEGPKA-----RLNEAMGYCVLNGGKRVRPLLLLA 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                  +   AL    A+E IH YSL+HDDLP+MD+  +RRGKPT HI YDE TAI+ G
Sbjct: 60  TTEALGGDLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           +GL T AF  ++   +        Q++  L    G QGM+GGQ +DI  E   +   ++ 
Sbjct: 120 DGLQTLAFSALTES-SGASAESVLQMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELE 178

Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTGAL+  +   GA+ +  A     E LR F   +G+ FQ+ DD++D E D
Sbjct: 179 RMHLEKTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESD 234


>gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
 gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
 gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
 gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
          Length = 293

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  S    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTIEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|260893255|ref|YP_003239352.1| Polyprenyl synthetase [Ammonifex degensii KC4]
 gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4]
          Length = 286

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 11/233 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L E ++ I+  LD  L    +         +  ++RY++LGG K++R  L+   A     
Sbjct: 7   LAEKARLIEEALDRYLPPEFAP-----PHPIHQSMRYSVLGGGKRLRPALLLGAAEAVGA 61

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +     L     IE IHCYSL+HDDLP+MDN   RRG+PT H  + E  AI+ G+ LLT 
Sbjct: 62  DVAEDLLLAACGIELIHCYSLVHDDLPAMDNDDFRRGRPTSHRVFGEAIAILTGDALLTL 121

Query: 127 AFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQK 182
            FE+++      +    +  ++++ +    G +GM+GGQ+LD+      +    +  I +
Sbjct: 122 GFELLARAALVARQGSEVGLRVIVEVARAAGSEGMVGGQVLDLGGSKNADPALLLEEIHR 181

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KTGAL   A  +GA++  A +   ++L  + E LG+ FQ+ DD+LD +E+  
Sbjct: 182 KKTGALFVAAVRAGALLGGAQEEALQKLTLYAEELGLAFQIVDDILDLDEEAK 234


>gi|70726395|ref|YP_253309.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435]
 gi|68447119|dbj|BAE04703.1| geranyl-trans-transferase [Staphylococcus haemolyticus JCSC1435]
          Length = 293

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 10/234 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
              + E   +I++ LD ++        +  N  L  +++Y+L  GGK+IR  LV     +
Sbjct: 3   KKSMNELINQINSALDGVIE------TSPLNTNLEESMQYSLNAGGKRIRPLLVFLTLDV 56

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            N ++    +   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E  AI+AG+ LL
Sbjct: 57  LNQDYKKGKKTALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           T AFEII+  +  L+ +++ +++  L HN G  GM+GGQ LD+Q E   +D   +  I K
Sbjct: 117 TKAFEIIADDEL-LESDVKVKILSRLAHNSGHLGMVGGQTLDMQSEDKPVDLDTLEQIHK 175

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KTGAL+ FA  S A +A   ++  + L  F  ++G++FQ+ DDLLD   D  K
Sbjct: 176 AKTGALLQFAVLSAADIAKVDKSTSQALEDFSNHMGLMFQIKDDLLDVYGDESK 229


>gi|304312212|ref|YP_003811810.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
 gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
          Length = 297

 Score =  221 bits (563), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 9/237 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L + LQ    R++T L+    +  +        +L  A+ YA++ GGK++R  L  
Sbjct: 1   MTFDLHAYLQTAQFRVNTRLEYWFAKQNTTAA-----KLSEAMHYAVMNGGKRLRPVLAF 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   A     A+E +H YSL+HDDLP+MDN  +RRG PT HI +DE TAI+A
Sbjct: 56  AAAEACGTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L   AFE+++S +   +   I+ +++ SL    G  GM GGQ LD+      +D   
Sbjct: 116 GDALQCLAFEVLASSELPSMTTPIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHG 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  I ++KTG L+  A   GA+ AHA ++    L  +   LG+ +Q+ DD+LD   D
Sbjct: 176 LETIHRLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGD 232


>gi|323498628|ref|ZP_08103620.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio sinaloensis DSM 21326]
 gi|323316326|gb|EGA69345.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio sinaloensis DSM 21326]
          Length = 294

 Score =  220 bits (562), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 84/240 (35%), Positives = 122/240 (50%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N+ +++  L+ L               L+ A+RY  LLGGK+ R FLV 
Sbjct: 1   MQEALTSLQQRNNAQLEAWLNTL---------PHQQQPLIEAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCTLEELDTPAAAVECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++           R +++ +L    G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTILADGHLNPDAQAQRIKMVKALAEASGAAGMCMGQALDLAAENRDVSLQE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A +        L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEIHRNKTGALMKCAIRLGAMAAGSKGVEVLPLLDKYADAIGLAFQVQDDILDIISDTE 231


>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
 gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
          Length = 296

 Score =  220 bits (562), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       L    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGLGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
           pyrophosphate synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
 gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
 gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
 gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
 gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
 gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
 gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
 gi|74489206|gb|EAO52676.1| Dimethylallyltransferase  / Geranyltranstransferase /
           Geranylgeranyl pyrophosphate synthetase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
 gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
 gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
 gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
 gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
 gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
 gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
 gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 296

 Score =  220 bits (562), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM
           17629]
 gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1]
          Length = 307

 Score =  220 bits (562), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 12/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
                +LQ+  + I+ +L+  L       +      +  A+ Y++  GGK++R  L+ E 
Sbjct: 10  SQFMEELQQKVEHINDVLEKFLPAEEGQQRI-----IFEAMNYSVRAGGKRLRPILMEET 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +F  +        AAIE IH YSL+HDDLP+MDN   RRGK T H  Y E   I+AG+
Sbjct: 65  YHMFGGSSAVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGD 124

Query: 122 GLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDET 175
            LL  A+E  +     ++ D   ++    L    G+ GM+GGQ++D++ E      I   
Sbjct: 125 ALLNLAYETAAKAFDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITRE 184

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++  I ++KTGAL+  +   GAI+A AS +E  R+      LG+ FQ+ DD+LD   
Sbjct: 185 KLDFIYRLKTGALIESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTS 241


>gi|6466227|gb|AAF12843.1|AF203881_16 geranyltransferase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 298

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 96/240 (40%), Positives = 147/240 (61%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M   L + +++ ++ ID +  + L      +      RL+ A+RYA + GGK++R  LV 
Sbjct: 1   MAVNLKTMMEQVAQDIDRLFAEQLP-----VPEDPRRRLVEAMRYAAIGGGKRLRPLLVV 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LFNV+   ALRVG AIECIH YSLIHDD+P MDN  +RRGKPTVH  +D+ +A+++
Sbjct: 56  ATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLS 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175
           G+ L   AFEI+S  K     ++R +L+ +L       GM+GGQ +D+  E      D  
Sbjct: 116 GDALQALAFEILSEEKIHTDPHVRLELIQALLSPPVKDGMVGGQAIDLAAETSTVPFDLP 175

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +Q++KTGAL  F  E+GAIM   +++ ++RL+ +  ++G+ FQ+ADDL+D E D  
Sbjct: 176 TITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEA 235


>gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755]
 gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755]
          Length = 297

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 86/237 (36%), Positives = 130/237 (54%), Gaps = 11/237 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN  L ++L +  +RI+  L + L Q        +N  L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MNYDLFAELSQYQQRINHFLSEQLSQY-----PAYNTPLIDAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V          A+E IH YSL+HDDLP+MDN  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L ++AFE+++     L    +   M  L  + G +GM  GQ LD+Q E   I   ++
Sbjct: 116 GDALQSFAFELLA-FDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I + KTGAL+  +   G  ++        K++L  + + +G+ FQ+ DD+LD   
Sbjct: 175 ERIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAKAIGLAFQVQDDILDVIG 231


>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 295

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 8/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +  +  R +  +  LL QT          RL +A+RY++L GGK++R  L    
Sbjct: 2   SDFLSWVSIHQSRFEDAVGRLLPQTD-----VLPQRLHAAMRYSVLEGGKRVRPLLAYAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L            AA+E IH YSL+HDD+P MD+  +RRGKPT HI+YDE TA++ G+
Sbjct: 57  GELAGAPIERVEIAAAAVELIHAYSLVHDDMPCMDDDVLRRGKPTCHIEYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
            L + AF+++S  +     + + Q++  L    G +GM GGQ +D+          ++  
Sbjct: 117 ALQSLAFQLLSEHRLSDDPSRQLQMVRLLAAASGSRGMAGGQAIDLASVGKQLAMPELEQ 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   KTGAL+  A   GA      Q + ++L  +G+ +G+ FQ+ DD+LD E D  
Sbjct: 177 MHIYKTGALIRAAILLGAHCGKLDQAQLDKLDRYGKCIGLAFQVVDDVLDSEADTA 232


>gi|295090870|emb|CBK76977.1| Geranylgeranyl pyrophosphate synthase [Clostridium cf.
           saccharolyticum K10]
          Length = 298

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 12/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L  +L + ++  + I+   L Q     +T H   +  A+ Y++  GGK++R  L+ E  
Sbjct: 2   ELKEQLLQYTRETEEIVYSYLPQ-----ETGHQKTIFEAMNYSVRAGGKRLRPLLMREVY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AAIE IH  SLIHDDLP MDN   RRGK T  + Y    A++AG+ 
Sbjct: 57  RLFGGQGKEVEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVAYGYDMAVLAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           LL YA E  S       D + +    + +  L+   G+ GM+GGQ +D++  ++ +   +
Sbjct: 117 LLIYAVETASRAFLSGADAVMAGRIGRCIHILSEKTGIYGMIGGQTVDVELTNKPVPREK 176

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I ++KTGAL+  +   GA++A AS+ E + +     N+G+ FQ+ DD+LD   
Sbjct: 177 LDFIYRLKTGALLEASMMIGAVLAGASKEELDTVEKIAANVGMAFQIQDDILDVTG 232


>gi|262402761|ref|ZP_06079322.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC586]
 gi|262351543|gb|EEZ00676.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC586]
          Length = 294

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 88/240 (36%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q NS+++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNSQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCELNELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   +   +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYADAVGLAFQVQDDILDIISDTE 231


>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 360

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 83/244 (34%), Positives = 125/244 (51%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +   +K ++  LD         +  +    +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKSYMINKAKSVNAALD-------ISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIAS 116

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   N  TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 117 CELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGD 176

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L    R  + +  L   IG  G++ GQM+D+  E ++       
Sbjct: 177 ALLALAFEHMTVVSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGLE 236

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
           ++  I   KT AL+  A   G IM   ++ E E+LR +   +G++FQ+ DD+LD     E
Sbjct: 237 RLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTE 296

Query: 233 DLPK 236
           +L K
Sbjct: 297 ELGK 300


>gi|127513698|ref|YP_001094895.1| polyprenyl synthetase [Shewanella loihica PV-4]
 gi|126638993|gb|ABO24636.1| farnesyl-diphosphate synthase [Shewanella loihica PV-4]
          Length = 293

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   +    +R+D  L   +     + Q     +L +A+ + AL+GGK+IR FLV     
Sbjct: 2   LNEAITRYQQRVDGQLRHFI-----NAQDDTEPQLKAAMEHGALIGGKRIRPFLVYAVGE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +  V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI ++E TAI+AG+ L
Sbjct: 57  MLGVPLERLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFNEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AFEIIS    +L  + +  ++ +L    G  GM GGQ +D+   D  ID   +  + 
Sbjct: 117 QTLAFEIISQEGGELSASQQLAMVRALAKASGYSGMCGGQAMDLNATDRQIDLETLKRLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           ++KTGAL+  A E   I A  +  +   L  F + +G+ FQ+ DD+LD     E+L K
Sbjct: 177 RLKTGALIRCAVELPIIAAKVTDEQASHLLTFADAIGLAFQVQDDVLDIIASTEELGK 234


>gi|269121046|ref|YP_003309223.1| polyprenyl synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614924|gb|ACZ09292.1| Polyprenyl synthetase [Sebaldella termitidis ATCC 33386]
          Length = 290

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 85/235 (36%), Positives = 135/235 (57%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L   L+E  +  +  L + + +       ++ +RL  ++ Y+++ GGK++R  L+   A 
Sbjct: 2   LKIYLKEKREIFEKYLQEKMTEL------KYPERLAESMIYSVMNGGKRLRPVLMYMIAD 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +FN ++       AA+ECIH YSL+HDDLP+MD+   RRGK T H ++DE TAI+AG+ L
Sbjct: 56  IFNQDYSRIEDTAAALECIHSYSLVHDDLPAMDDDTYRRGKLTTHKKFDEATAILAGDAL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LTYAF +IS+ +  ++++ +  ++  L+   G+ GM+GGQ +D++ E   I    +  I 
Sbjct: 116 LTYAFYVISASEK-IENSGKVNIIRILSDYSGINGMVGGQYVDMESENKEISFDTLKYIH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KTG L+  A E           +KE L  + E +GI FQ+ DDLLD E D  K
Sbjct: 175 SHKTGKLLKAAVELPLEALAIEGKQKEVLLEYSELIGIAFQIKDDLLDIEGDFEK 229


>gi|217964491|ref|YP_002350169.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Listeria monocytogenes HCC23]
 gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Listeria monocytogenes HCC23]
 gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99]
          Length = 293

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   I+D+ L +  S  + +    L  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKIIDESLFKEISERKIE--PTLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 296

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
 gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
          Length = 296

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 133/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q    L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPSVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
 gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
          Length = 297

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 122/236 (51%), Gaps = 9/236 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           MN    S       RI+T L+  L            +RL  A+RY++LGG K++R  L  
Sbjct: 1   MNPDFQSWAAACQARIETFLETRLPAADC-----VPERLHKAMRYSVLGGGKRVRPLLSF 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   +      V AA+E IH YSL+HDDLP MD+  +RRGKPT H++YDE TA++ 
Sbjct: 56  AAGELVAADLERVTVVAAAVELIHAYSLVHDDLPCMDDDILRRGKPTCHVEYDEATALLT 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQV 177
           G+ L T AFE+++          + Q++  L    G +GM GGQ   LD   + +   ++
Sbjct: 116 GDSLQTLAFELLAEKPLADIPETQLQMIAQLALASGSRGMAGGQAFDLDSVGKMLSLPEL 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTGAL+  A   GA  +   +  +  +L  F + +G+ FQ+ DDLLD E 
Sbjct: 176 EFMHIHKTGALIRAAVMLGARCSSCLNDEQLAQLDHFAKCVGLAFQVVDDLLDTEA 231


>gi|332283715|ref|YP_004415626.1| geranyltranstransferase [Pusillimonas sp. T7-7]
 gi|330427668|gb|AEC19002.1| geranyltranstransferase [Pusillimonas sp. T7-7]
          Length = 304

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 17/240 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
             P  L +  + I+ +LD +L Q     +T   + L  A+RYA+LGG K++R+ LV    
Sbjct: 7   DFPIWLDDRVQHIEAVLDQVLPQ-----ETVVPESLHEAMRYAVLGGGKRVRAALVYAAG 61

Query: 63  SLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
                     +   +      AA+E IH YSLIHDDLP MD+  +RRG+PTVH+++ E T
Sbjct: 62  EAALQSGTPASAQQIGLDHAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTVHVRFSEAT 121

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--D 173
           A++AG+ L   AFE++      +   +  Q    L  + G  GM+GGQ +D +   +   
Sbjct: 122 AMLAGDALQPLAFELLG--LMPIAPALIVQATQLLARSAGSLGMVGGQAIDCESVGVALS 179

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + Q+  +  MKTGA++  +   G I+A A    ++ L  +   +G+ FQ+ DD+LD   D
Sbjct: 180 KEQLQQMHSMKTGAMLEASVLLGGIVAGAGSAVRQGLEDYATAIGLAFQVVDDILDVTAD 239


>gi|304395483|ref|ZP_07377366.1| Polyprenyl synthetase [Pantoea sp. aB]
 gi|304356777|gb|EFM21141.1| Polyprenyl synthetase [Pantoea sp. aB]
          Length = 299

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L    ++++  L   +           +  L++A+ Y ALLGGK++R FLV    
Sbjct: 2   DFARLLDVYQQQVNAALTRFIEPL-----PFQSSPLVNAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            + + +  +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI+Y E TAI+AG+ 
Sbjct: 57  EMLHADPASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116

Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++      +    R  ++  L    G+ GM GGQ LD+  E   +D  Q+  
Sbjct: 117 LQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMCGGQALDLAAEGKSVDLDQLEQ 176

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A  A +     L  + E +G+ FQ+ DD+LD   D   + 
Sbjct: 177 IHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAIGLAFQVQDDILDVVGDTAVIG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|39933601|ref|NP_945877.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009]
 gi|39647447|emb|CAE25968.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
           [Rhodopseudomonas palustris CGA009]
          Length = 308

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 105/237 (44%), Positives = 145/237 (61%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L   ++  + +L  LL       +     RL+ AIRY+ L GGK++R FL  E A
Sbjct: 9   DFAKRLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVESA 68

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F ++   AL VGAA+ECIHCYSLIHDDLPSMDN  +RRG+PT+H  YD+ TAI+AG+ 
Sbjct: 69  AVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDA 128

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           LLT+AF+I++  +      +R  L   L    GL GM+GGQMLD+  E      +   V 
Sbjct: 129 LLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVA 188

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ + C +GAI+  AS ++   L  +G  LG  FQ+ADDLLD E D  
Sbjct: 189 RLQQMKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGDAA 245


>gi|58696945|ref|ZP_00372440.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58699606|ref|ZP_00374302.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630859|ref|YP_002727650.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
 gi|58533876|gb|EAL58179.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58536823|gb|EAL60043.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225592840|gb|ACN95859.1| Geranylgeranyl pyrophosphate synthase [Wolbachia sp. wRi]
          Length = 263

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 9/212 (4%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10  LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP MDN   RR + + H ++DE TA++AG+ LLT AFE++SS      + 
Sbjct: 70  VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSL-----NE 124

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            R +++  L+  IG++GM+GGQ LDI     D  ++  I  MKT  L   +CE GAI+  
Sbjct: 125 KRCEIIKVLSQAIGIRGMVGGQALDI---DTDFNKIKEIHLMKTAKLFAASCEIGAIIGG 181

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A+  ++  L  FG NLG+IFQ  DD+ D E+D
Sbjct: 182 ATDEQRRALYNFGINLGLIFQAKDDIEDYEQD 213


>gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
 gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
          Length = 301

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 109/235 (46%), Positives = 150/235 (63%), Gaps = 3/235 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S L   + RI+T L  LL +T    +    +RL++A+R+ AL GGK++R  LV 
Sbjct: 1   MTFDLKSHLAAQAGRIETALTSLLKETERDGEISRPERLINAMRHGALNGGKRLRPVLVM 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           + A LF       ++ G A+E IHCYSL+HDDLP+MD+  +RRG+PTVH  YD+ TAI+A
Sbjct: 61  DAAGLFGRADDGVVQAGCALELIHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDDATAILA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
           G+ LLT AF++I+      +  IR +L   L    G+ GM GGQMLD++ E  D  E ++
Sbjct: 121 GDALLTLAFDVITDEAVHPEAGIRLRLCRELARASGIGGMAGGQMLDLESEHRDRSEAEI 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +Q MKTGAL+ +AC +GAI+  AS  + ERL  FGE +G+ FQLADDLLD E 
Sbjct: 181 RHLQSMKTGALLRYACRAGAILGDASDADVERLTRFGEIIGLAFQLADDLLDVEA 235


>gi|77361281|ref|YP_340856.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas haloplanktis TAC125]
 gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas haloplanktis TAC125]
          Length = 295

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 85/202 (42%), Positives = 122/202 (60%), Gaps = 4/202 (1%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ++ + +A  Y+L+ GGK++R FLV     +   +      + AAIECIH YSL+HDDLP+
Sbjct: 29  DETIKAATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVLAAAIECIHSYSLVHDDLPA 88

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PT HI Y E  AI+AG+ L   AFE+I+          + +++  L H  
Sbjct: 89  MDDDELRRGRPTCHIVYGEAHAILAGDALQALAFELIAKHNFNCSAQAQVKMIAELAHAS 148

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLR 211
           GLQGM+ GQ LDI   D+ I   ++  I K+KTGAL+  A   GA+ + + SQN  E L 
Sbjct: 149 GLQGMVAGQGLDIAATDKVITVAELERIHKLKTGALISCAITLGALCSNNVSQNTLENLA 208

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            FG  +G+ FQ+ DD+LD E D
Sbjct: 209 TFGYAIGLAFQVHDDILDVEGD 230


>gi|87200267|ref|YP_497524.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135948|gb|ABD26690.1| farnesyl-diphosphate synthase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 303

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 101/236 (42%), Positives = 139/236 (58%), Gaps = 8/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
           G L   L   ++ ID   D LL      +     DRL+ A+RYA + GGK++R  LV   
Sbjct: 10  GLLKPALAAIAEDIDRSFDLLLP-----VPGDPRDRLVEAMRYAAIGGGKRLRPLLVCAT 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L  V+   A+RVG AIE IH YSLIHDDLP MDN  +R GKPTVH+ +D+ TA++AG+
Sbjct: 65  GALHGVSREAAVRVGTAIEAIHVYSLIHDDLPCMDNDGLRHGKPTVHVAFDDATAVLAGD 124

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L  +AFE++S P T      R +L+ +L    G+ GM GGQM+DI  E    D   V  
Sbjct: 125 ALHDFAFEVLSDPATSGDPFTRIELIRTLATASGMNGMCGGQMMDIVAETSSFDLPTVTR 184

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q++KTGAL+  + E GAI+       +  LR +  ++G+ FQ+ADDLLD E D  
Sbjct: 185 LQQLKTGALLGASVELGAILGKVPPEGRTHLRGYARDIGLAFQIADDLLDAEGDEA 240


>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 296

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/230 (37%), Positives = 123/230 (53%), Gaps = 6/230 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           L + S+     +DD L      +      RL  A+RY  LLGGK++R FLV     +  V
Sbjct: 3   LDDFSRLHRQRIDDCLSAQLESLPA-MAPRLRDAMRYGLLLGGKRVRPFLVYAVGEMLGV 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+ECIH YSL+HDDLP+MDN  +RRG+PTVH  +DE TAI+AG+ L T A
Sbjct: 62  KRELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121

Query: 128 FEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F I++      +    R +++ +L    G  GM GGQ LD+Q E   I   ++  + + K
Sbjct: 122 FSILADHPLPDRLLANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLPELEQVHRHK 181

Query: 185 TGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+  A   GA+  A         L+ +   +G+ FQ+ DD+LD   D
Sbjct: 182 TGALIECAVALGALCKADVDDTTLAALQTYAAAIGLAFQVQDDILDITGD 231


>gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120]
 gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120]
          Length = 293

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/231 (37%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L    +    ++D+ L +  S    +   +L  ++ Y++  GGK+IR  LV       N 
Sbjct: 4   LTVFLEHYKKVIDESLFKEISVRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNA 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           + L  +R   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT A
Sbjct: 62  DPLLGVRTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKIFGDATAILAGDALLTLA 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F I++  +  L    R  L+  ++ + G +GM+GGQ  D++ E   +   ++  I   KT
Sbjct: 122 FSILAEDEN-LSFETRLALIKEISFSSGAEGMVGGQQADMEAENKQVTLEELSSIHARKT 180

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           G L+ FA  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 181 GELLIFAVTSAAKIAEADSEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|255284124|ref|ZP_05348679.1| geranyltranstransferase [Bryantella formatexigens DSM 14469]
 gi|255265298|gb|EET58503.1| geranyltranstransferase [Bryantella formatexigens DSM 14469]
          Length = 295

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 12/239 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              +L + S+ +  ++   L       +T     LL A+ Y++  GGK++R  L+ E   
Sbjct: 3   FKEELAKRSEEVQAVVYAYLPAEEGFQKT-----LLEAMNYSMTAGGKRLRPLLMQETYR 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF  N        AAIE IH +SL+HDDLP+MDN   RRGK T H+ Y E  AI+AG+GL
Sbjct: 58  LFGGNGKVVEPFMAAIEMIHTHSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDGL 117

Query: 124 LTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           L YA+E           N    + M  LT   G+ GMLGGQ +D+Q     +   ++  I
Sbjct: 118 LNYAYETACRAFALEPGNPHIGEAMTVLTTKTGVYGMLGGQAVDVQSVGGTLSREKLDFI 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            ++KT AL+  +  +GAI+A AS+ E   +     ++G+ FQ+ DD+LD      +L K
Sbjct: 178 YRLKTSALIECSMMTGAILAGASEEEIRTIGQVASDVGLAFQIQDDILDVTSTSQELGK 236


>gi|192288955|ref|YP_001989560.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192282704|gb|ACE99084.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 308

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 105/237 (44%), Positives = 145/237 (61%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L   ++  + +L  LL       +     RL+ AIRY+ L GGK++R FL  E A
Sbjct: 9   DFAKRLDTTAEETEALLGRLLSDELMSDEIARPRRLMDAIRYSTLGGGKRLRPFLAVESA 68

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F ++   AL VGAA+ECIHCYSLIHDDLPSMDN  +RRG+PT+H  YD+ TAI+AG+ 
Sbjct: 69  AVFGIDRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAILAGDA 128

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           LLT+AF+I++  +      +R  L   L    GL GM+GGQMLD+  E      +   V 
Sbjct: 129 LLTFAFDIVTRDEVHNDPTVRLLLTRVLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVA 188

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ + C +GAI+  AS ++   L  +G  LG  FQ+ADDLLD E D  
Sbjct: 189 RLQQMKTGALLRYGCVAGAILGQASPDQYRALDDYGRALGEAFQIADDLLDVEGDAA 245


>gi|311693472|gb|ADP96345.1| geranyltranstransferase [marine bacterium HP15]
          Length = 298

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/229 (35%), Positives = 126/229 (55%), Gaps = 11/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L+    R+D  LD  + + ++      + RL  A+RY++LGG K+IR  L    A     
Sbjct: 12  LETCRARVDAELDRCITRDSA------SGRLQEAMRYSVLGGGKRIRPALCLAAAKAMGQ 65

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL    ++E IH YSLIHDDLP+MD+  +RRG+PT HI +DE TAI+AG+ L   A
Sbjct: 66  TGDEALIPACSVELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQALA 125

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
           F  ++     L +++R  ++  L    G  GM+GGQ +D++   + +   Q+  + + KT
Sbjct: 126 FGWLAEA-PGLSESVRLIMVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKT 184

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  +   GA+ A    +     L  + + LG+ FQ+ DDLLD E D
Sbjct: 185 GALIETSVRIGALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGD 233


>gi|212223283|ref|YP_002306519.1| bifunctional short-chain isoprenyl diphosphate synthase
           [Thermococcus onnurineus NA1]
 gi|212008240|gb|ACJ15622.1| bifunctional short-chain isoprenyl diphosphate synthase
           [Thermococcus onnurineus NA1]
          Length = 342

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 123/238 (51%), Gaps = 17/238 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
             L +++++ +K +D +L  L+ +       +   +L  A R Y L GGK++R F+V   
Sbjct: 5   DELFARVKKMAKSVDDVLFKLIPE-------REPRKLYDAARHYPLAGGKRVRPFVVLRA 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A     +   AL   AA+E IH YSL+HDD+  MD   +RRG+PTVH  +    AI+AG+
Sbjct: 58  AEAVGGDPSKALYPAAAVELIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGINMAILAGD 115

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            L + AFE ++  +   +   R   +L  T N     +  GQ LDI+ E  +E    +  
Sbjct: 116 LLFSKAFEAVARAEISPEKKARILEVLVQTSN----ELCEGQALDIEFETREEVTVDEYL 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   KTGAL   +   GAI+   ++   + L  +G N+GI FQ+ DD+LD   D  K
Sbjct: 172 QMISGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEEK 229


>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Bacillus pumilus ATCC 7061]
 gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Bacillus pumilus ATCC 7061]
          Length = 296

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 133/240 (55%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L   L    + I+  L   + +          + L S++ Y+L  GGK++R  LV 
Sbjct: 1   MTSNLNEFLTTRKQTIEDYLFTYVQELTI------PEDLKSSMLYSLKAGGKRLRPVLVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              + +  N    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  Y E TA++A
Sbjct: 55  ALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLA 114

Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
           G+ LLT +F +I S   + +  + + +++  L  + G  GM+GGQ  D++ E   +   +
Sbjct: 115 GDALLTESFRLITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I   KTG L+ F+  +GA++A AS ++ E+LR F  ++GI FQ+ DD+LD E    K
Sbjct: 175 LESIHARKTGKLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEK 234


>gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165]
 gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165]
          Length = 297

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/237 (36%), Positives = 130/237 (54%), Gaps = 11/237 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN  L ++L +  +RI+  L + L Q        +N  L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MNYDLFAELSQYQQRINHFLSEQLSQY-----PAYNTPLIDAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V          A+E IH YSL+HDDLP+MDN  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGKMLGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L ++AFE+++     L    +   M  L  + G +GM  GQ LD+Q E   I   ++
Sbjct: 116 GDALQSFAFELLA-FDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I + KTGAL+  +   G  ++        K++L  + E +G+ FQ+ DD+LD   
Sbjct: 175 ERIHRNKTGALILASVMMGFNLSAYAQDHQIKQQLVQYAEAIGLAFQVQDDILDVIG 231


>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
 gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
          Length = 306

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 126/236 (53%), Gaps = 12/236 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
               LQ+  +RI+  L   L    +         L+ A+RY  LLGGK+IR FLV     
Sbjct: 15  FSQDLQQVQERINAFLAQQLNLNTA------PSPLIEAMRYGVLLGGKRIRPFLVYATGR 68

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   + +      A +E IH YSLIHDDLP+MDN  +RRG+PT HI +DE TAI+AG+ L
Sbjct: 69  MLGADLIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDAL 128

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
             +AFEI++     L    +  L+ +L    G +GM  GQ LD+  E   I   ++  I 
Sbjct: 129 QAFAFEILTQAPA-LSAEQKLALVSTLAQASGAKGMCLGQSLDLISEQKQISLAELEQIH 187

Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + KTGAL+  A + G I +     +   ++L+ +   +G+ FQ+ DD+LD E +  
Sbjct: 188 RNKTGALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESE 243


>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
 gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
          Length = 296

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L       +     Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e]
 gi|224499942|ref|ZP_03668291.1| hypothetical protein LmonF1_09784 [Listeria monocytogenes Finland
           1988]
 gi|224501694|ref|ZP_03670001.1| hypothetical protein LmonFR_04127 [Listeria monocytogenes FSL
           R2-561]
 gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
 gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
 gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
 gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e]
 gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
 gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
 gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
          Length = 293

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  +    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++     L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDDN-LSFETRIALINQISFSSGAEGMVGGQLADLEAENKQVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + +A  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|254509029|ref|ZP_05121134.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
 gi|219548064|gb|EED25084.1| geranyltranstransferase [Vibrio parahaemolyticus 16]
          Length = 294

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q ++++++  LD L               L+ A+RY  LLGGK+ R FLV 
Sbjct: 1   MQEALTSLQQRSNQQLERWLDTL---------PHQQQPLIDAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +   +        AAIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGSSLEQLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++  + +   +  R  ++  L    G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTILAEGQLSPEAEAQRIMMVKVLAEASGAAGMCMGQALDLAAENRIVSLQE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEIHRNKTGALMKCAIRMGALAAGEKGIEVLPLLDKYADAIGLAFQVQDDILDVISDTE 231


>gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208]
          Length = 293

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   I+D+ L +  S  + +    L  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKIIDESLFKEISERKIE--PTLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQLADMEAESKQVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIFAITSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|262172097|ref|ZP_06039775.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus MB-451]
 gi|261893173|gb|EEY39159.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus MB-451]
          Length = 294

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 88/240 (36%), Positives = 127/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDLWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCELSELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIEFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++    +   +  R  ++ +L    G QGM  GQ LD+  E   +   +
Sbjct: 112 GDALQTLAFTILAEGTLSPAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAILLHLDRYAEAVGLAFQVQDDILDIISDTE 231


>gi|299143832|ref|ZP_07036912.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518317|gb|EFI42056.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 290

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 8/214 (3%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL--TALRVGAAIECIHCYSLI 88
             ++  ++  ++ Y+L  GGK++R  L        + +      L    AIE IH YSLI
Sbjct: 27  ADEYQKKVYESMSYSLSSGGKRVRPLLSLLAYKSVSGSEDFTKILPFATAIELIHTYSLI 86

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD----NIRS 144
           HDDLP+MDN  +RRGKPT H  Y E  AI+AG+GLL  + E++S    +  +        
Sbjct: 87  HDDLPAMDNDDLRRGKPTNHKVYSEAIAILAGDGLLNMSAEVMSRELDKYDEMDELKRAI 146

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           + M  +    G+ GM+GGQ++D++  + ++      + K+KT AL+  A  SGAI+A AS
Sbjct: 147 KAMKYIFTASGVHGMIGGQVIDMEYGYNMNLDICESMYKLKTAALIKAAIVSGAIIAGAS 206

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
             E      +   +GI +Q+ DD+LD E D  K+
Sbjct: 207 DEEIATFEEYANCIGIAYQIRDDILDLEADSKKE 240


>gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
           SS3/4]
          Length = 297

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 12/243 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M      +  +  K  +T++   L +     +T H   +  A+ Y++  GGK++R  L+ 
Sbjct: 1   MADNFKERFSQAVKETETVVYSYLPE-----ETGHQKTIFEAMNYSVKAGGKRLRPLLMR 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   LF  N        AA+E IH  SLIHDDLP MDN   RRGK T    Y    A++A
Sbjct: 56  EVYRLFGGNGPEIKPFMAAMEMIHTSSLIHDDLPCMDNDEYRRGKLTTWKAYGYDMAVLA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           G+ L+ YAFE  S   +   D  ++ + +  L    G+ GM+GGQ +D++   + +   +
Sbjct: 116 GDALMIYAFETASKAFSMGADPAKAGRAIGILAEKTGIYGMIGGQTVDVELTGKAVPREK 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I ++KTGAL+  +   GA++A A+  E + +      +G+ FQ+ DD+LD     E+
Sbjct: 176 LDFIYRLKTGALLEASMMIGAVLAGATVEEIKEVETMASEVGLAFQIQDDILDVTSTQEE 235

Query: 234 LPK 236
           L K
Sbjct: 236 LGK 238


>gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
           monocytogenes FSL J2-071]
 gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
           monocytogenes FSL J2-071]
          Length = 285

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/224 (38%), Positives = 128/224 (57%), Gaps = 6/224 (2%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I   +D+ L +  S  + +    L  ++ Y++  GGK+IR  LV        VN L  ++
Sbjct: 3   IKKYIDESLFKEISERKIE--PALKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVK 60

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I++  
Sbjct: 61  TATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAED 120

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
           +  L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L+ FA
Sbjct: 121 EN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFA 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 180 VTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 223


>gi|225377100|ref|ZP_03754321.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
           16841]
 gi|225211005|gb|EEG93359.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
           16841]
          Length = 303

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 82/234 (35%), Positives = 127/234 (54%), Gaps = 10/234 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            + +++Q     I+ I+   L +     +T     ++ A+ Y+ L GGK++R  L++E  
Sbjct: 9   DIRAEIQTRVDEIEQIIKRYLPEEEGWQKT-----IMEAMNYSILAGGKRLRPMLMSETY 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AA+E IH YSL+HDDLP+MDN   RRGK T H  Y E   I+AG+ 
Sbjct: 64  RLFGGKSKVIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDA 123

Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
           LL YAFE  +       DN    + M  L    G+ GM+GGQ++D+Q E    I + ++ 
Sbjct: 124 LLNYAFETAAKAFDMEPDNRNIGKAMQILATKAGIYGMVGGQVVDVQSEDSGDITKEKLD 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I ++KTGAL+  +   GA++A A++NE+  +      +G+ FQ+ DD+LD   
Sbjct: 184 FIYRLKTGALIESSMLIGAVLAGATKNEQNTIEKAATEVGLAFQIQDDILDVTS 237


>gi|283834262|ref|ZP_06354003.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
 gi|291069784|gb|EFE07893.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
          Length = 299

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ   ++ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSL+HDDLP+MDN  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  QMFGVSLSTLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L    G+ GM GGQ LD++ E   ++   +  
Sbjct: 117 LQTLAFSIISDAPMPEVADRDRIAMLSELAQASGIAGMCGGQALDLEAEGHQVELDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A     E    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRECLAILDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|57867011|ref|YP_188659.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
 gi|293366522|ref|ZP_06613199.1| geranyltranstransferase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|57637669|gb|AAW54457.1| geranyltranstransferase [Staphylococcus epidermidis RP62A]
 gi|291319291|gb|EFE59660.1| geranyltranstransferase [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 293

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 30  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 90  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHL 148

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 149 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 208

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 209 HLGMMFQIKDDLLDVYGDESK 229


>gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
 gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
          Length = 297

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 11/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L + L    +RI+  L + L  T S         L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MSYLLATDLTHLQQRINHFLAEKLKTTDS-----VGSPLVEAMAYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V         AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L ++AFE++++    L D  +   +  L    G +GM  GQ LD   +++ +   ++
Sbjct: 116 GDALQSFAFELLAT-DPHLTDREKVVQVTELATASGAKGMCLGQSLDLIAENKAVSLEEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +I + KTGAL+  +   G  ++  SQN    + L  + + +G+ FQ+ DD+LD   +  
Sbjct: 175 ELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGLAFQVQDDILDVIGETD 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|329725410|gb|EGG61893.1| geranyltranstransferase [Staphylococcus epidermidis VCU144]
 gi|329735348|gb|EGG71640.1| geranyltranstransferase [Staphylococcus epidermidis VCU045]
          Length = 298

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 35  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 94

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 95  DDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVSIIKRLSKASGHL 153

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I + KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 154 GMVGGQALDMESEGKSIRLETLESIHETKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 213

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 214 HLGMMFQIKDDLLDVYGDESK 234


>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
 gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
 gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
 gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
 gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
 gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
 gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
 gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
 gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
 gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
          Length = 296

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L       +     Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
          Length = 300

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 123/235 (52%), Gaps = 9/235 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
           N    S  +     ++  L+ LL             RL  A+RYA+LGG K++R  L   
Sbjct: 5   NSDFQSWARSRQALVEEALNRLLPPAE-----VAPQRLHQAMRYAVLGGGKRVRPLLCYA 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +            AA+E IH YSL+HDDLP MD+  +RRGKPT H++YDE TA++AG
Sbjct: 60  AGEVSGAELERLSTAAAALELIHVYSLVHDDLPCMDDDVLRRGKPTCHVEYDEATALLAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178
           + L + AF++++  +       + +++  L    G +GM GGQ +D++   + +   ++ 
Sbjct: 120 DSLQSLAFQLLAEYRVADSPQTQLRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELE 179

Query: 179 MIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   KTGAL+  +   GA    A +  + +RL  F + +G+ FQ+ DD+LD + 
Sbjct: 180 FMHIHKTGALIRASVILGANCGRALASKDMDRLDHFAKRIGLAFQVVDDVLDAQS 234


>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
 gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
 gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
 gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
 gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
 gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
 gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
 gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
          Length = 296

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I+++A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
           WAL-14163]
 gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
           WAL-14163]
          Length = 294

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 9/232 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +  +L ++++ ++ ++   L     H +T     +  A+ Y++  GGK++R  L+ E   
Sbjct: 2   MNEQLLQSTEEVEQVVYSYLPAEEGHQKT-----IFEAMNYSVKAGGKRLRPLLMREVYR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF    +      AAIE IH  SLIHDDLP MDN   RRGK T  + Y    A++AG+ L
Sbjct: 57  LFGGTGIEIEPFMAAIEMIHTSSLIHDDLPCMDNDEYRRGKKTTWVVYGYDMAVLAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
           L YA E  +       +  R  + +  L    G+ GM+GGQ +D++  D+ I + ++  I
Sbjct: 117 LIYAIETAARAFQMTDNAQRVGKCIGILAQKTGIYGMIGGQTVDVELTDKLIPKDKLDFI 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++KTGAL+  A   GA+MA AS  E E +      +G+ FQ+ DD+LD   
Sbjct: 177 YRLKTGALLEAAMVIGAVMAGASDEECETVERMAAAIGLAFQIQDDILDVTS 228


>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
          Length = 296

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 10/220 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
            IL + L +        +   ++ A+ Y+L+ GGK++R  L+ E   LF           
Sbjct: 16  AILREYLPEANG-----YQSVIMEAMEYSLMAGGKRLRPMLMMETYRLFGGETEVIYPFM 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E IH YSL+HDDLP+MDN   RRG+ T HI Y E   I+AG+ LL YAFE       
Sbjct: 71  AAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFE 130

Query: 137 QLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFA 192
           Q  +      Q M  L    G+ GM+GGQ++D+++    IDE  +  I ++KTGAL+  A
Sbjct: 131 QFPEESLRIGQAMRVLARKAGIYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESA 190

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              GAI+A AS+ + + ++     +G+ FQ+ DD+LD   
Sbjct: 191 MMIGAILAGASKEDVKSMQKIAGKIGMAFQIQDDILDVTS 230


>gi|242399212|ref|YP_002994636.1| Bifunctional short chain isoprenyl diphosphate synthase
           [Thermococcus sibiricus MM 739]
 gi|242265605|gb|ACS90287.1| Bifunctional short chain isoprenyl diphosphate synthase
           [Thermococcus sibiricus MM 739]
          Length = 341

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 17/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63
           L   L+E  K +D ++ +L+ +       +    +  A R Y L GGK+IR F+V     
Sbjct: 6   LFEALKEKIKIVDEVIFELIPE-------KEPKIIYDAARHYPLAGGKRIRPFIVLTSTE 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A+   AA+E +H YSL+HDD+  MD    RRG+PTVH  +    AI+AG+ L
Sbjct: 59  AVGGNPEKAVYAAAAVELLHNYSLVHDDIMDMDE--KRRGRPTVHKVWGVNMAILAGDLL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
            +  FE ++    + +  ++   ++S T N     +  GQ  D++ E    +   +   +
Sbjct: 117 FSKVFEAVAKIPVEAEKVVKVLDVISKTSN----ELCEGQARDLEFENKETVTIDEYMKM 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTGAL+  +   G ++   +    + L  +G N+GI FQ+ DD+LD   D  K
Sbjct: 173 ISGKTGALIDASATIGGLIGTENNEYIQALSKYGRNVGIAFQIWDDVLDLIADEEK 228


>gi|165976224|ref|YP_001651817.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165876325|gb|ABY69373.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 297

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 88/241 (36%), Positives = 141/241 (58%), Gaps = 11/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L + L    +RI+  L      T       ++  L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MSYSLSTDLSVIQQRINDFLS-----TKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + +V         AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L ++AFE+I+  ++ L D+ + + + SLT   G +GM  GQ LD   +D+ ++  ++
Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +I + KTGAL+  +   G  ++  SQN   K++L  + + +G+ FQ+ DD+LD   +  
Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSAHSQNLAVKQQLERYAQAIGLAFQVQDDILDVIGETH 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
 gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
          Length = 296

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L       +     Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 296

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I+++A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSNATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|209883275|ref|YP_002287132.1| geranyltranstransferase [Oligotropha carboxidovorans OM5]
 gi|209871471|gb|ACI91267.1| geranyltranstransferase [Oligotropha carboxidovorans OM5]
          Length = 312

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 102/237 (43%), Positives = 144/237 (60%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
                L   +   + +LD LL +     + +   RL+ A+RY+ L GGK++R FLV   A
Sbjct: 13  DFSKLLDATAADTEALLDRLLSERPEQGEIERPHRLIEAMRYSSLNGGKRLRPFLVVASA 72

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++FNV    AL  GAA+ECIHCYSLIHDDLPSMDN  +RRG+PT H ++DE TAI+AG+ 
Sbjct: 73  AIFNVPREGALMAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDEATAILAGDS 132

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVF 178
           LLT AF+II+  +      +R  L  +L    G+ GM GGQ++D+  E      +   V 
Sbjct: 133 LLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVA 192

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ + C +GA++  AS+++   L  +G   G  FQ+ADDLLD E D  
Sbjct: 193 KLQQMKTGALLKYGCIAGALLGQASKDQYAALDAYGHAFGEAFQIADDLLDVEGDAA 249


>gi|34763574|ref|ZP_00144509.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
           pyrophosphate synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886763|gb|EAA23901.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
           pyrophosphate synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 297

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 129/243 (53%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + +   + YA L GGK++R FL+ 
Sbjct: 1   MN-DFQVYLKEKTDFFETELKRELKELS------YPETIAKGMEYATLNGGKRLRPFLLF 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N N    ++   A+E IH YSL+HDDLP++DN   RRGK T H  + E   I+ 
Sbjct: 54  ATLELLNENIKKGVKSAIALEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEGILI 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S    +L  + +   ++S T    G+ GM+GGQM+DI+ E   I    
Sbjct: 114 GDSLLTYAFYVLSQKNLELLSSEQIVNIISKTSEYAGINGMIGGQMIDIESENKKIGLET 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I   KTG L+    E   I+A   +++++ L  + + +G+ FQ+ DD+LD E    +
Sbjct: 174 LKYIHSHKTGKLIKLPIEIACIIADLEKDKRKVLEEYADLIGLAFQVKDDILDVEGTFEE 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 301

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 124/236 (52%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
              +L +    ++  + + +       +  +   +  A+ YA+  GGK++R  LV E A 
Sbjct: 8   FEGELADKKAYVEKFMREFMPP-----ENAYPQVIHRAMHYAVFNGGKRLRPILVLESAQ 62

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +   AL V  A+E IH YSL+HDDLP+MD+  +RRGKPT H  + E  AI+ G+ L
Sbjct: 63  VVGKDLTRALPVACAMEMIHSYSLVHDDLPAMDDDDLRRGKPTCHKVFGEANAILTGDAL 122

Query: 124 LTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
           LT AFEI+++      ++    ++++      +G  GM+GGQ+LD++ E  D     +  
Sbjct: 123 LTLAFEIMTACAELPGMEPRYVAKVVRETARAVGSLGMVGGQVLDLELEGKDTDFFTLKT 182

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   KTGAL      +GA++        + L  + EN G+ FQ+ DD+LD E D  
Sbjct: 183 LHSKKTGALFRACLRAGALLFGVEDERLQALTRYAENFGLAFQITDDILDVEGDEK 238


>gi|317492932|ref|ZP_07951356.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919054|gb|EFV40389.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 301

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 129/237 (54%), Gaps = 10/237 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
               L+   +R D  L   +           + +L++A+RY ALLGGK++R +LV     
Sbjct: 4   FEQLLKTYHQRADAALIQYIEPL-----PFADGQLVAAMRYGALLGGKRLRPYLVYATGE 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F ++        AA+ECIH YSL+HDDLP+MD+  +RRG+PT HI++ E  AI+AG+ L
Sbjct: 59  MFGLSLDNLDAPAAAVECIHAYSLMHDDLPAMDDDNLRRGQPTSHIKFGEAHAILAGDAL 118

Query: 124 LTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
            T AF I++ SP   +  + R  ++  L    G+ GM GGQ LD++ E  ++D   +  I
Sbjct: 119 QTLAFSILADSPMPDVAVSDRLAMLSELAQASGVAGMCGGQALDLEAEGKYVDLQSLERI 178

Query: 181 QKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTGAL+  A   GA+ A  +       L  +   +G+ FQ+ DD+LD   D  K
Sbjct: 179 HNHKTGALIRCAIRMGALAAGDTGRAALPLLDRYAAAIGLAFQVQDDILDVIGDSEK 235


>gi|6016394|sp|O66126|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
          Length = 291

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 122/214 (57%), Gaps = 5/214 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L+ ++  +       RL  AI Y+L  GGK+IR  LV         N    L  G A+E
Sbjct: 14  NLINESLLNKYHPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALE 73

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN   RRGK T H ++DE TAI+AG+ LLT AF+ I    TQL  
Sbjct: 74  MIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCI--LNTQLNA 131

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI 198
            I+  L+  L+   G  GM+ GQMLD+Q E   +   ++  I   KTG L+  A  S  I
Sbjct: 132 EIKLSLINLLSTASGSNGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGI 191

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + + +  + E+L   G+N+G++FQ+ DD+LD E 
Sbjct: 192 IMNFNDAQIEQLNIIGKNVGLMFQIKDDILDVEG 225


>gi|169837010|ref|ZP_02870198.1| Dimethylallyltransferase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 269

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 138/238 (57%), Gaps = 10/238 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           LQ+  K    +++D L++   + + ++ ++L  A+ YA++ GGK+IR  L+     LF+ 
Sbjct: 6   LQKYLKEKKKVVEDNLMELLGNYRDKYPEKLAKAMEYAVMNGGKRIRPILMYMICDLFDE 65

Query: 68  N---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           N   +     +  A+E IHCYSL+HDDLP+MDN   RRGK TVH +Y+E   ++ G+ LL
Sbjct: 66  NKKSYDKIKEIAVALEFIHCYSLVHDDLPAMDNDDYRRGKLTVHKKYNEAIGVLVGDVLL 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           T AF +++S K  L+D  + Q++  L+   G  GM+GGQ +DI+ E   ++   +  I  
Sbjct: 126 TEAFGVVASAKN-LEDKSKVQIISKLSEYAGFFGMVGGQFVDIESEHKKVEIDTLKYIHA 184

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
            KTG L+  A E   I  +    + +++  + + LGI FQ+ DD+LD E    ++ KK
Sbjct: 185 HKTGKLLTAAIELPMIALNIENEKYQKMVEYSKLLGIAFQIKDDILDIEGNFEEIGKK 242


>gi|332159126|ref|YP_004424405.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Pyrococcus sp. NA2]
 gi|331034589|gb|AEC52401.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Pyrococcus sp. NA2]
          Length = 341

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 76/238 (31%), Positives = 115/238 (48%), Gaps = 17/238 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
             L  +++E +K +D  L +++ +       +    L  A R Y L GGK++R F+V   
Sbjct: 4   DELFERIREKAKFVDEKLFEIIPE-------KEPKVLYEAARHYPLAGGKRVRPFVVLTS 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +   AL    AIE IH YSL+HDD+  MD    RRGKPTVH  +    AI+AG+
Sbjct: 57  TEAVGGDWRKALYPAVAIELIHNYSLVHDDIMDMDE--TRRGKPTVHRVWGINMAILAGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            L + AFE IS  +   +   +    + L  N     +  GQ +D++ E    +   +  
Sbjct: 115 LLFSKAFEAISRAEVPPEKKAKILETIVLASN----ELCEGQAMDLEFENREAVTIEEYM 170

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   KTGAL   + + G I+   S+     L  +G N+GI FQ+ DD+LD   D  K
Sbjct: 171 NMVSGKTGALFEASAKIGGIVGSESEEYINALARWGRNVGIAFQIWDDVLDLIADEKK 228


>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
 gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
          Length = 296

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGELLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ +++ L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEKNLLTFAKYIGLAFQIRDDILDVEG 230


>gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
           29176]
 gi|197299223|gb|EDY33753.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
           29176]
          Length = 296

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 127/237 (53%), Gaps = 12/237 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN     +  +  ++I+ IL   L +   + +T     ++ A+ Y+L+ GGK++R  L+ 
Sbjct: 1   MN--FKEEYTDRVEKIEKILKKYLPEKKGYQRT-----IMEAMEYSLMAGGKRLRPMLMW 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   LF           AAIE IH YSL+HDDLP+MDN   RRG+ T HI Y E   I+A
Sbjct: 54  ESYRLFGGEGAAIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           G+ LL YAFE       +  ++     + +  L    G+ GM+GGQ++D+Q+  + +   
Sbjct: 114 GDALLNYAFETACRAFEEESEHALRIGKALKILADKAGIYGMIGGQVVDVQESGKAVSGE 173

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  I ++KT AL+  +  +GA++A A + +  R+      +G+ FQ+ DD+LD   
Sbjct: 174 VLDFIYRLKTSALIEASMMAGAVLAGAEEGQVSRMEQIAGKIGLAFQIQDDILDVTS 230


>gi|261416040|ref|YP_003249723.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 295

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 15/241 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
            + S+ +   + +  I  D   +   H+        RL  A+RY++  GGK++R  L   
Sbjct: 3   SIESEAKIAQEYLARIAKDAEAKFDEHLPPVKDRPCRLHEAMRYSMFAGGKRLRPGLAKA 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F           +A+E +H +SLIHDDLP +DN   RRGK T H ++ E TA++AG
Sbjct: 63  TFDMFGGKGEKIWLATSALEMLHTFSLIHDDLPCVDNDDYRRGKLTSHKKFGEATAVMAG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + L  +AFE++            ++ +  L H +G  GM+GG+M DI+ E   +D   V 
Sbjct: 123 DALCIHAFEMMGKTGN-------AKAIELLAHLLGTYGMIGGEMTDIECEGKTVDLEIVD 175

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235
            I   KT AL+  +   GA++A AS+ + E +R +G ++G+ FQ+ DD+LD     E+L 
Sbjct: 176 YIHYHKTAALIEASLLVGAMLAKASEKDMEIIRNYGRSIGLAFQIVDDILDIVSTTEELG 235

Query: 236 K 236
           K
Sbjct: 236 K 236


>gi|237740341|ref|ZP_04570822.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
 gi|229422358|gb|EEO37405.1| dimethylallyltransferase [Fusobacterium sp. 2_1_31]
          Length = 298

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 13/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN      L+E +   +T L   L + +      + + +   + YALL GGK++R FL+ 
Sbjct: 1   MNSDFQVYLKEKTNFFETELKKELKELS------YPETIAKGMEYALLNGGKRLRPFLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N +    ++    IE IH YSL+HDDLP++DN   RRGK T H  + E  AI+ 
Sbjct: 55  TTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S     +    +   ++S T    G+ GM+GGQM+DI+ E   I+   
Sbjct: 115 GDALLTYAFYMLSEKNLNILSFEQITKIISKTSAYSGVNGMIGGQMIDIESENKKINLET 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I K KTG L+    E   I+A  S++++  L  + E +G+ FQ+ DD+LD E    D
Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFED 234

Query: 234 LPK 236
           L K
Sbjct: 235 LGK 237


>gi|24373100|ref|NP_717143.1| geranyltranstransferase [Shewanella oneidensis MR-1]
 gi|24347286|gb|AAN54587.1|AE015598_6 geranyltranstransferase [Shewanella oneidensis MR-1]
          Length = 293

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 95/238 (39%), Positives = 137/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L + ++E   R+    DD L Q  S ++     +L +A+ + ALLGGK+IR FLV     
Sbjct: 2   LVNAIKEYQLRV----DDQLKQRFSTLE-DTAPQLKAAMTHGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++     +       ++ +L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A +++ + +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234


>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
          Length = 1187

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 14/230 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
           M   L S        I+T L++ +         ++  ++  A+RY++L  GGK+    + 
Sbjct: 303 MQFDLRSYWTTLISEINTKLEEAI-------PVKYPQQIYEAMRYSVLAKGGKRAPPVMC 355

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                LF  + L A     A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+
Sbjct: 356 VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 415

Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           AG+ L    F  I S  P   + +    +++  +  ++G  GM  GQ LD++        
Sbjct: 416 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNS 472

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           V  +Q+ K G +   +   G  +  A+ ++  RLR +G  +G+++Q+ DD
Sbjct: 473 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDD 522


>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
 gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
          Length = 296

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGIGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 230


>gi|46143506|ref|ZP_00135080.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208283|ref|YP_001053508.1| geranyltranstransferase [Actinobacillus pleuropneumoniae L20]
 gi|303251195|ref|ZP_07337374.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307245667|ref|ZP_07527753.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250028|ref|ZP_07531996.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307252381|ref|ZP_07534278.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307254629|ref|ZP_07536460.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259080|ref|ZP_07540810.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|126097075|gb|ABN73903.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|302649929|gb|EFL80106.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306853369|gb|EFM85588.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857950|gb|EFM90038.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306860303|gb|EFM92319.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862424|gb|EFM94387.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866747|gb|EFM98605.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 297

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 11/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L + L    +RI+  L      T       ++  L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MSYSLSTDLSVIQQRINDFLS-----TKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + +V         AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L ++AFE+I+  ++ L D+ + + + SL    G +GM  GQ LD   +D  ++  ++
Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +I + KTGAL+  +   G  ++  SQN   K+ L  + + +G+ FQ+ DD+LD   +  
Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
 gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
          Length = 314

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 14/231 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
           T++ ++  +    +  Q+ D++  A+RY++L  G K+    +      LF  N   A   
Sbjct: 27  TLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRHAAFPT 86

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG+ L    F  I S  
Sbjct: 87  ACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLGFRHIVSHT 146

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           P   + +     ++  +   +G  GM  GQ LD++        V  +Q+ K G +   + 
Sbjct: 147 PSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDLEG---GPNSVEFVQEKKFGEMGECSA 203

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD-------CEEDLPKK 237
             G ++A A  +E +RLR +G  +G+++Q+ DD+L+        +ED  K+
Sbjct: 204 VCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILEAKTMKSKVDEDKKKR 254


>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
 gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
          Length = 296

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
 gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
          Length = 296

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 230


>gi|242242790|ref|ZP_04797235.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
 gi|242233926|gb|EES36238.1| geranyltranstransferase [Staphylococcus epidermidis W23144]
 gi|319400858|gb|EFV89077.1| geranyltranstransferase [Staphylococcus epidermidis FRI909]
          Length = 288

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  +++Y+L  GGK+IR  ++     + N ++   L    A+E IH YSLIHDDLP+MDN
Sbjct: 25  LEESMKYSLNAGGKRIRPVILLLTLKMLNKDYQQGLNSALALEMIHTYSLIHDDLPAMDN 84

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG+ T H  Y E  AI+AG+ LLT AFE++S+  T ++D+++  ++  L+   G  
Sbjct: 85  DDYRRGELTNHKVYGEWKAILAGDALLTKAFELVSN-DTTIEDSVKVNIIQRLSKASGHL 143

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           GM+GGQ LD++ E   I    +  I K KTGAL+ F+  +   +A   QN  + L  F  
Sbjct: 144 GMVGGQALDMESEGKSIRLETLESIHKTKTGALLNFSVMAAVDIAQVEQNIAKNLDEFSH 203

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
           +LG++FQ+ DDLLD   D  K
Sbjct: 204 HLGMMFQIKDDLLDVYGDESK 224


>gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7]
 gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7]
          Length = 297

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 15/245 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M       L+    +ID  L        +  + +    +L A+ Y+L  GGK++R  LV 
Sbjct: 1   MTDRHEQLLKAYCAKIDEQLLRF-----TENKPELQSVVLEAMEYSLTAGGKRLRPILVL 55

Query: 60  ECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           E   +    +    ++V  ++E IH YSLIHDDLP MDN   RRGKP+ H  + E  A++
Sbjct: 56  EFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPCMDNDDFRRGKPSCHKAFSEDIALL 115

Query: 119 AGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDE 174
           AG+ L T AFE+I+    +  +       L+  L+  IG  GM+GGQ++D   ++E ID 
Sbjct: 116 AGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSKAIGTDGMIGGQVIDLETENEVIDI 175

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
             +  +Q  KTGAL+  AC  G +++            + + +G  FQ+ DD+LD     
Sbjct: 176 ETLNRLQSCKTGALIEAACVMGVVLSG-KMEYIPAAADYAQAMGRAFQIVDDILDVTGTF 234

Query: 233 -DLPK 236
            +L K
Sbjct: 235 EELGK 239


>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
          Length = 369

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 5/217 (2%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALR 74
           +++  ++  +    +  ++ +++  ++RY++L    K+    +          +   AL 
Sbjct: 85  NSVRKEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGGSKQQALP 144

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E +H  SLIHDDLP MD+  IRRG+P+ H  +    A++AG+ L    FE I S 
Sbjct: 145 TACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAGDALFPLGFEYIVSS 204

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCF 191
            + +  +   +++  +   +G QGM+ GQ +D     +   D + V  I + K G +   
Sbjct: 205 TSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSLVEFIHERKFGIMAEC 264

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +G I+  A+  E ERLR +G ++G+++Q+ADD+L
Sbjct: 265 SAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDIL 301


>gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 292

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 77/238 (32%), Positives = 124/238 (52%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L  + + I+  L ++L       +      L  ++ Y+L+ GGK+IR  L      
Sbjct: 2   FKEYLAASKQNIEQWLGEVLTSPNQEFKP-----LYESMNYSLMQGGKRIRPILSKAVLE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + +           A+ECIH YSL+HDDLP+MDN   RRG  T H  Y E  AI+AG+GL
Sbjct: 57  MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ 181
           LTYAF+++++ KT      +   +  +    G +GM+GGQ  D+  +++ I   ++ ++ 
Sbjct: 117 LTYAFQLMTANKTATAQE-KLDAIQCVATAAGPEGMVGGQAFDMLSENKHIPLEELQVLH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + KTGAL   + E G I+ +A    +  L  +   LG++FQ+ DD+LD      +L K
Sbjct: 176 RGKTGALFNASVELGLILGNADTATRTALMKYANCLGLLFQITDDILDVTGTIEELGK 233


>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
 gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
 gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
 gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
 gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 296

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 296

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L       +     Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ   +D + + +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMDAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27]
 gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27]
          Length = 292

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L  + + I+  L ++L     +   Q  ++L  ++ Y+L+ GGK+IR  L      
Sbjct: 2   FKDYLASSKQNIEQWLGEVL-----NSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + +           A+ECIH YSL+HDDLP+MDN   RRG  T H  Y E  AI+AG+GL
Sbjct: 57  MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
           LTYAF++++S  T      +   +  +    G +GM+GGQ  D   +D+ I   ++ ++ 
Sbjct: 117 LTYAFQLMTS-NTVASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTGAL   + E G I+  A+   +  L  +   LG++FQ+ DD+LD      +L K
Sbjct: 176 TGKTGALFNASVELGLILGSANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233


>gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
 gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847735|gb|EDK24653.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
 gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 296

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 123/237 (51%), Gaps = 12/237 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN       ++ +++I+ IL   L       QT H   +  A+ Y+L+ GGK++R  L+ 
Sbjct: 1   MN--FKEDCRKRTEKIEEILRKYLPD-----QTGHQQIIEEAMEYSLMAGGKRLRPMLMK 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   LF           AAIE IH YSL+HDDLP+MDN   RRG+ T H+ Y E   I+ 
Sbjct: 54  ETFDLFGGKGGVIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEDMGILT 113

Query: 120 GNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           G+ LL YAFE   S       N  +  + +  L    G+ GM+GGQ++D++     I   
Sbjct: 114 GDALLNYAFETACSAFETDPQNSILIGRALKILAGKAGIYGMIGGQVVDVRSAGCKISGE 173

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  I ++KTGAL+  +   GA++A A + E  ++      +G+ FQ+ DD+LD   
Sbjct: 174 LLAFIYRLKTGALIEASVMIGAVLAGAKEEEIGKMEEIAGKIGLAFQIQDDILDVTS 230


>gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
 gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
          Length = 292

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 125/238 (52%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L  + + I+  L ++L     +   Q  ++L  ++ Y+L+ GGK+IR  L      
Sbjct: 2   FKDYLASSKQNIEQWLGEVL-----NSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + +           A+ECIH YSL+HDDLP+MDN   RRG  T H  Y E  AI+AG+GL
Sbjct: 57  MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
           LTYAF++++S  T      +   +  +    G +GM+GGQ  D   +D+ I   ++ ++ 
Sbjct: 117 LTYAFQLMTS-NTVASAQQKLDAIKCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTGAL   + E G I+  A++  +  L  +   LG++FQ+ DD+LD      +L K
Sbjct: 176 TGKTGALFNASVELGLILGSANKTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233


>gi|49483771|ref|YP_040995.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425647|ref|ZP_05602071.1| ispA [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428308|ref|ZP_05604706.1| ispA [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430945|ref|ZP_05607325.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433634|ref|ZP_05609992.1| ispA protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257436547|ref|ZP_05612591.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876]
 gi|282904104|ref|ZP_06311992.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160]
 gi|282905931|ref|ZP_06313786.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908841|ref|ZP_06316659.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911160|ref|ZP_06318962.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914329|ref|ZP_06322115.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899]
 gi|282919298|ref|ZP_06327033.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427]
 gi|282924623|ref|ZP_06332291.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101]
 gi|283958286|ref|ZP_06375737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503404|ref|ZP_06667251.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510420|ref|ZP_06669126.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809]
 gi|293530960|ref|ZP_06671642.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428100|ref|ZP_06820732.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590934|ref|ZP_06949572.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8]
 gi|49241900|emb|CAG40594.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257271341|gb|EEV03487.1| ispA [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275149|gb|EEV06636.1| ispA [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278375|gb|EEV09011.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281727|gb|EEV11864.1| ispA protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257283898|gb|EEV14021.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M876]
 gi|282313458|gb|EFB43853.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C101]
 gi|282317108|gb|EFB47482.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C427]
 gi|282321510|gb|EFB51835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M899]
 gi|282324855|gb|EFB55165.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327105|gb|EFB57400.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331223|gb|EFB60737.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595722|gb|EFC00686.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus C160]
 gi|283790435|gb|EFC29252.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920228|gb|EFD97294.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095070|gb|EFE25335.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466784|gb|EFF09304.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus M809]
 gi|295128458|gb|EFG58092.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575820|gb|EFH94536.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438010|gb|ADQ77081.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195423|gb|EFU25810.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 293

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 94/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  N +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMNTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
           thaliana]
          Length = 326

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 17/240 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
           +N  L +        I+  LD+ +         +H   +  A+RY++L  G K+    + 
Sbjct: 43  LNFDLRTYWTTLITEINQKLDEAI-------PVKHPAGIYEAMRYSVLPQGPKRAPPVMC 95

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                LF  + L A     A+E +H  SLIHDDLP MD+  +RRGKP+ H  Y    AI+
Sbjct: 96  VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155

Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           AG+ L   AF+ I S  P   +      +L+  +   +G  GM  GQ +D++      + 
Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +Q+ K GA+   +   G ++  A+++E + LR +G  +G+++Q+ DD+    ED  K
Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269


>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
 gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
          Length = 299

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 11/231 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           LQ     ID  L D + Q ++      + RL  A+RY LLGG K+IR  L    A     
Sbjct: 13  LQHCRAEIDQQLADYMDQASA------SQRLQDAMRYGLLGGGKRIRPALCLAAAEAVGG 66

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL    A+E IH YSL+HDDLP+MDN  +RRG+ T HI +DE +AI+AG+ L   A
Sbjct: 67  QRQIALAPACALEMIHAYSLMHDDLPAMDNDDLRRGRATAHIAFDESSAILAGDALQAEA 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
           F ++++   +L   ++  ++ +L +  G  GM+GGQ +D++     +   Q+  + + KT
Sbjct: 127 FRVLATA-PRLSAEVKLAMVKALANACGANGMVGGQAIDLESVARTLTLDQLENMHRHKT 185

Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  +   GA+          + L  +   LG+ FQ+ DDLLD E D  
Sbjct: 186 GALIEASVHLGALAGGVKDPALLDALARYARALGLAFQVQDDLLDIEGDTE 236


>gi|46015555|pdb|1RTR|A Chain A, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate
           Synthase
 gi|46015556|pdb|1RTR|B Chain B, Crystal Structure Of S. Aureus Farnesyl Pyrophosphate
           Synthase
          Length = 301

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|290474684|ref|YP_003467564.1| geranyltranstransferase [Xenorhabdus bovienii SS-2004]
 gi|289173997|emb|CBJ80784.1| geranyltranstransferase (=farnesyldiphosphate synthase)
           [Xenorhabdus bovienii SS-2004]
          Length = 305

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 131/237 (55%), Gaps = 6/237 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M+    +  +E+       ++D L+ T S +    +  L +A+ + A+LGGK++R FLV 
Sbjct: 1   MSEQYKAPFEEHLSACQQHVNDKLMATFSSLP-FLDSPLATAMLHGAVLGGKRLRPFLVY 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +F ++  +      A+ECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+A
Sbjct: 60  SVGEMFGLSRESLDAPALALECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGESLAILA 119

Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L + AFEI++      +  + R  ++  L    GL GM GGQ LD++ E   ID   
Sbjct: 120 GDALQSLAFEILAKQDMPNIALSDRLAMVAELATASGLAGMCGGQSLDLEAEGKQIDLAT 179

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I + KTGAL+C A   GA  A    +     L  + + +G+ FQ+ DD+LD   
Sbjct: 180 LEQIHRHKTGALICTAVRLGAYSAGQRGREVLPLLDQYSQAIGLAFQVHDDILDVIG 236


>gi|240145667|ref|ZP_04744268.1| geranyltranstransferase [Roseburia intestinalis L1-82]
 gi|257202256|gb|EEV00541.1| geranyltranstransferase [Roseburia intestinalis L1-82]
          Length = 296

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 10/234 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            + +++  ++   + I+   L +   + +T     ++ A+ Y+ L GGK++R  L+ E  
Sbjct: 2   DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AAIE IH YSL+HDDLP+MDN   RRGK T H+ Y E  AI+AG+ 
Sbjct: 57  RLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVF 178
           LLTYAFE  +        N    + +  L+   G+ GM+GGQ +D++ E      + ++ 
Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I ++KT AL+  +   GA++A A+ +E++ +      +G+ FQ+ DD+LD   
Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTS 230


>gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898472|ref|ZP_05258396.1| hypothetical protein LmonJ_01615 [Listeria monocytogenes J0161]
 gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818]
 gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900]
 gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
 gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900]
 gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818]
          Length = 293

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  +    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGAL 188
           ++     L    R  L+  ++ + G +GM+GGQ+ D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDDN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + +A  S A +A A   + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
 gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
          Length = 296

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E +H YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKEKNLGVGAACALEMVHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|291536359|emb|CBL09471.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
           M50/1]
          Length = 296

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 10/234 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            + +++  ++   + I+   L +   + +T     ++ A+ Y+ L GGK++R  L+ E  
Sbjct: 2   DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AAIE IH YSL+HDDLP+MDN   RRGK T H+ Y E  AI+AG+ 
Sbjct: 57  RLFGGKSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVF 178
           LLTYAFE  +        N    + +  L+   G+ GM+GGQ +D++ E      + ++ 
Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I ++KT AL+  +   GA++A A+ +E++ +      +G+ FQ+ DD+LD   
Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEEVASKVGLAFQIQDDILDVTS 230


>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
 gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
          Length = 296

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 124/233 (53%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L +  + ++  LDD        +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 5   FDFKAYLGKAKETVEAALDD-------SLGPERPESLRDAMRYSLLAGGKRLRPILCLAA 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +   A+    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+
Sbjct: 58  CELAGGDAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE+++     +  +   +++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 118 ALLTRAFEMVALRSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEY 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+     +GA++ +A       LR +   +G+ FQ+ DD+LD   
Sbjct: 178 IHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITA 230


>gi|238754213|ref|ZP_04615570.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
 gi|238707460|gb|EEP99820.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
          Length = 305

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 91/241 (37%), Positives = 130/241 (53%), Gaps = 6/241 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           MN G P    +         ++ LL   + +   H+D L+ A+RY  LLGGK++R +LV 
Sbjct: 1   MNMGEPVLFNQQLAVYQQRANNALLSFIAPLPFNHSD-LVQAMRYGTLLGGKRLRPYLVY 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +F V   T     AA+ECIH YSL+HDDLP+MDN  +RRG+PT HI++ E  AI+A
Sbjct: 60  ATGQMFGVPLATLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILA 119

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++  P   +    R  ++  L    G+ GM GGQ LD+  E   I  T+
Sbjct: 120 GDALQTLAFSILADAPMPDVTLQDRISMLSELATASGVAGMCGGQALDLAAEERQISLTE 179

Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A    A+ A  A      +L  +   +G+ FQ+ DD+LD   D  
Sbjct: 180 LEKIHRHKTGALIRTAVRMAALTAGTAGHLAMPQLDRYANAIGLAFQVQDDILDVIGDTA 239

Query: 236 K 236
           K
Sbjct: 240 K 240


>gi|57650478|ref|YP_186407.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL]
 gi|87160564|ref|YP_494166.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195328|ref|YP_500132.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221639|ref|YP_001332461.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509750|ref|YP_001575409.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140058|ref|ZP_03564551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|258451179|ref|ZP_05699214.1| geranyltranstransferase [Staphylococcus aureus A5948]
 gi|262049107|ref|ZP_06021984.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30]
 gi|262051188|ref|ZP_06023412.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3]
 gi|282924770|ref|ZP_06332437.1| geranyltranstransferase [Staphylococcus aureus A9765]
 gi|284024581|ref|ZP_06378979.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 132]
 gi|294848552|ref|ZP_06789298.1| geranyltranstransferase [Staphylococcus aureus A9754]
 gi|304380890|ref|ZP_07363550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|57284664|gb|AAW36758.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus COL]
 gi|87126538|gb|ABD21052.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202886|gb|ABD30696.1| geranyltranstransferase, putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374439|dbj|BAF67699.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368559|gb|ABX29530.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257861234|gb|EEV84047.1| geranyltranstransferase [Staphylococcus aureus A5948]
 gi|259160825|gb|EEW45845.1| hypothetical protein SA930_1619 [Staphylococcus aureus 930918-3]
 gi|259162776|gb|EEW47341.1| hypothetical protein SAD30_0264 [Staphylococcus aureus D30]
 gi|269941012|emb|CBI49396.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282592777|gb|EFB97783.1| geranyltranstransferase [Staphylococcus aureus A9765]
 gi|294824578|gb|EFG41001.1| geranyltranstransferase [Staphylococcus aureus A9754]
 gi|304340617|gb|EFM06551.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|315198784|gb|EFU29112.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus CGS01]
 gi|329314199|gb|AEB88612.1| Geranyltranstransferase [Staphylococcus aureus subsp. aureus T0131]
 gi|329728330|gb|EGG64767.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21189]
          Length = 293

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|310689999|pdb|3P8R|A Chain A, Crystal Structure Of Polyprenyl Synthase From Vibrio
           Cholerae
          Length = 302

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 89/238 (37%), Positives = 124/238 (52%), Gaps = 14/238 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
             L S  Q N++++D  L+ +  QT           L+ A+RY  LLGGK+ R +LV   
Sbjct: 11  EALSSYQQRNNQQLDQWLNRIPFQTLP---------LIEAMRYGLLLGGKRARPYLVYIT 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+
Sbjct: 62  GQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L T AF I++           R  ++ +L    G QGM  GQ LD+  E   I   ++ 
Sbjct: 122 ALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELE 181

Query: 179 MIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            I + KTGALM  A   GA+ A    +     L  + E +G+ FQ+ DD+LD   D  
Sbjct: 182 TIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTE 239


>gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
 gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
          Length = 292

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L  + + I+  L ++L     +   Q  ++L  ++ Y+L+ GGK+IR  L      
Sbjct: 2   FKDYLASSKQNIEQWLGEVL-----NSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + +           A+ECIH YSL+HDDLP+MDN   RRG  T H  Y E  AI+AG+GL
Sbjct: 57  MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
           LTYAF++++S  T      +   +  +    G +GM+GGQ  D   +D+ I   ++ ++ 
Sbjct: 117 LTYAFQLMTS-NTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTGAL   + E G I+  A+   +  L  +   LG++FQ+ DD+LD      +L K
Sbjct: 176 SGKTGALFNASVELGLILGCANNTTRTALMEYSNCLGLLFQITDDILDVTGTIEELGK 233


>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
           DSM 5476]
 gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
           DSM 5476]
          Length = 300

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 14/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
               +L E  + +D  L+ LL       +      ++ A+RY++  GGK+IR  L  E  
Sbjct: 7   EFQDQLNEYIQLVDRELERLLPD-----EDILQKSVVDAMRYSVTAGGKRIRPVLTLEVC 61

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +   AL    A+E IH YSLIHDDLP MD+  +RRGKP+ HI + E TA++AG+ 
Sbjct: 62  RMLGGDPHKALPFACAVELIHSYSLIHDDLPCMDDDAMRRGKPSCHIAFGESTALLAGDA 121

Query: 123 LLTYAFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176
           LLT AFE  S       T  ++ +R+  +LS     G+ GM+GGQ++D++ E        
Sbjct: 122 LLTLAFETASHAPQTHGTGCEETLRAISILS--RLAGVHGMIGGQVIDLESEGRGIEYPV 179

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +  +KTGAL+  AC+ GA  A A + + +++  + + LG+ FQ+ DD+LD   D  +
Sbjct: 180 LHQMHLLKTGALIKAACQMGAAAAGAQEEDLDKIGEYADALGLAFQICDDILDVVGDEAQ 239


>gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
 gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
          Length = 289

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 7/230 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  + ++ Q  ++ ++  L D+ L   S +       L SA      GGK+ R  L    
Sbjct: 8   DQEIAARTQAVNQFVEKYLSDMELPAGSAISELRKSMLYSA----TNGGKRFRPVLSLLV 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LF       L   AA+E IH YSLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 64  GELFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHKVFGEDFALLAGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179
            LLT AF +I+         +   L   L+   G++GM+GGQ +D++  D+ +   ++  
Sbjct: 124 ALLTEAFMLIAE-NYGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAGDKQMSLEELTH 182

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + ++KTGAL+  A E  A++A A   E E L+ FGE LG+ FQ+ADD+LD
Sbjct: 183 LHRLKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLAFQVADDVLD 232


>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
 gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
          Length = 303

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 16/237 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
            L+E ++ ++ +LD+LL             RL  A+RYA+LGG K++R+ LV        
Sbjct: 11  WLRERAQHVEHVLDELLPGADIA-----PTRLHEAMRYAVLGGGKRVRAVLVYAAGQACP 65

Query: 67  VNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           VN  T        R  AA+E IH YSL+HDDLP MD+  +RRG+PTVH+Q+DE TA++AG
Sbjct: 66  VNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L   AFE+++     +   +  Q    L    G QGM GGQ +D+      +   ++ 
Sbjct: 126 DALQPLAFELLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D  
Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240


>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 296

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F+      +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L      G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLEFAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 295

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 12/242 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   +    Q     ++  L   L +T        +D+L +++ Y+L+ GGK++R  L+ 
Sbjct: 1   MGAEMKELWQSRRTLVERALQAELDRTDI-----LDDKLRASMAYSLMAGGKRLRPILLM 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +    +    A+E IH YSLIHDDLP+MDN   RRGK T H  YDE TAI+A
Sbjct: 56  AAADAVGADGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ LLT AF +I   +  +      +++  ++ + G +GM+GGQMLD++ E   I   ++
Sbjct: 116 GDALLTLAFTVILR-QQDVPAERLLRIVDEISRSAGAEGMVGGQMLDLEAENRRISMEEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
             +   KTGAL   A  SGAI+A AS+ +   L  + ++ G+ FQ+ DD+LD      D+
Sbjct: 175 QRVHMGKTGALFRAALRSGAILAGASEQQLAALTTYADHFGLAFQITDDILDVVGTAEDI 234

Query: 235 PK 236
            K
Sbjct: 235 GK 236


>gi|238019305|ref|ZP_04599731.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
 gi|237864004|gb|EEP65294.1| hypothetical protein VEIDISOL_01169 [Veillonella dispar ATCC 17748]
          Length = 292

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 77/238 (32%), Positives = 125/238 (52%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L  + + I+  L ++L       +      L  ++ Y+L+ GGK+IR  L      
Sbjct: 2   FKDYLASSKQHIEQWLGEVLTSPNREFKP-----LYESMNYSLMQGGKRIRPILSKAVLE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + + +         A+ECIH YSL+HDDLP+MDN   RRG  T H  Y E  AI+AG+GL
Sbjct: 57  MLHKDPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGMAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQ 181
           LTYAF+++++ +T      +   +  +    G +GM+GGQ  D+  +D+ I   ++ ++ 
Sbjct: 117 LTYAFQLMTANETATAQE-KLDAIQCVATAAGPEGMVGGQAFDMLSEDKHIPLEELKVLH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + KTGAL   + E G I+ +A    +  L  +   LG++FQ+ DD+LD      +L K
Sbjct: 176 RGKTGALFNASVELGLILGNADTATRTALMEYANCLGLLFQITDDILDVTGTIEELGK 233


>gi|254472285|ref|ZP_05085685.1| geranyltranstransferase [Pseudovibrio sp. JE062]
 gi|211958568|gb|EEA93768.1| geranyltranstransferase [Pseudovibrio sp. JE062]
          Length = 301

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 106/238 (44%), Positives = 146/238 (61%), Gaps = 3/238 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M+  L S + E ++ ++  L  LL +     +    +RLL A+ Y AL GGK++R  L+ 
Sbjct: 1   MSVALKSVITETAQSLEEKLTSLLGEKVLPQEVARPERLLEAMNYAALSGGKRLRPVLMV 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A LF       L   +A+ECIHCYSL HDDLP+MD+  +RRG+PT H  +DE TAI+A
Sbjct: 61  EAARLFGHEDEGTLVAASALECIHCYSLAHDDLPAMDDDDLRRGRPTTHKAFDEATAILA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQV 177
           G+ LLT AF+ I+  +      IR +L   L    G+ GM GGQMLD+  E  D  E ++
Sbjct: 121 GDALLTIAFDFIADEQVHPDAAIRLRLSQELARASGIGGMAGGQMLDLASEHRDRTEAEI 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +Q MKTGAL+ +AC +GAI+A+AS ++  RL  FGE +G+ FQLADDLLD   D  
Sbjct: 181 RQLQAMKTGALIRYACRAGAILANASDDDIARLTRFGEIIGLAFQLADDLLDLTGDAE 238


>gi|303252274|ref|ZP_07338440.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247789|ref|ZP_07529826.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307256855|ref|ZP_07538633.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307261287|ref|ZP_07542962.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|302648733|gb|EFL78923.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855732|gb|EFM87898.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306864589|gb|EFM96494.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306869018|gb|EFN00820.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 297

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 88/241 (36%), Positives = 139/241 (57%), Gaps = 11/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L + L    +RI+  L      T       ++  L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MSYSLSTDLSVIQQRINDFLS-----TKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + +V         AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGRMLDVPLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L ++AFE+I   ++ L D+ + + + SLT   G +GM  GQ LD   +D+ ++  ++
Sbjct: 116 GDALQSFAFELIVQDES-LTDSQKVRQIQSLTQAAGARGMCLGQSLDLLAEDKAVNLAEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +I + KTGAL+  +   G  ++  SQN   K+ L  + + +G+ FQ+ DD+LD   +  
Sbjct: 175 ELIHRNKTGALIIASVLMGFNLSVHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 296

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 89/237 (37%), Positives = 126/237 (53%), Gaps = 9/237 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           L + S+     +DD L      +      RL  A+RY  LLGGK++R FLV     +  V
Sbjct: 3   LDDFSRLHRQRIDDCLSAQLESLPA-MAPRLRDAMRYGLLLGGKRVRPFLVYAVGEMLGV 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +       AA+ECIH YSL+HDDLP+MDN  +RRG+PTVH  +DE TAI+AG+ L T A
Sbjct: 62  KNELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121

Query: 128 FEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F I++           R +++  L    G  GM GGQ LD+Q E   I   ++  + + K
Sbjct: 122 FTILADHPMPDSLLANRVRMLSRLARASGYLGMCGGQALDLQAEGRQISIAELEQVHRHK 181

Query: 185 TGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+  A   GA+  A   +     L+ +   +G+ FQ+ DD+LD   D   L K+
Sbjct: 182 TGALIECAVALGALCKADVDETTLSALQTYAAAIGLAFQVQDDILDITGDTATLGKR 238


>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 337

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 13/248 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVT 59
           +    S +   +K I+  LDD +    + +        +  A+RY LL GGK++R  L  
Sbjct: 30  DSEFISYMNNKAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPMLCL 89

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L      TA+    A+E IH  SLI DDLP MD+  +RRGKPT H  + E TAI+A
Sbjct: 90  VACELVGGQESTAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTAILA 149

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEF 171
            N L++ A E  ++S    +      + +  +   +G++G++ GQ  D        + E 
Sbjct: 150 ANALMSLAVEQTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFETED 209

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                +  I   KT  L+  A   GAIM   S  E ERL+ +   +G++FQ+ DD+LD  
Sbjct: 210 EGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 269

Query: 232 ---EDLPK 236
              E+L K
Sbjct: 270 KSSEELGK 277


>gi|261212060|ref|ZP_05926346.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC341]
 gi|260838668|gb|EEX65319.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC341]
          Length = 294

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N++++D  L+ +  Q+           L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSYQQRNNQQLDLWLNRIPFQSLP---------LIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ 
Sbjct: 52  ITGQMLGCELNELDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R  ++ +L    G QGM  GQ LD+  E   +   +
Sbjct: 112 GDALQTLAFTILAEGALSAAGETQRVAMIQALAEASGAQGMCLGQALDLAAENRLVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A    +     L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRYADAVGLAFQVQDDILDIISDTE 231


>gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
 gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
          Length = 293

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 86/228 (37%), Positives = 128/228 (56%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             +    ++DD LL   +    +   +L  ++ Y++  GGK+IR  LV       N + +
Sbjct: 7   FLEHYKKVMDDSLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNTDPM 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y + TAI+AG+ LLT AF +
Sbjct: 65  RGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKRTNHKVYGDATAILAGDALLTLAFSV 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++     L    R  L+  L+ + G +GM+GGQ  D++ E   I   ++  I   KTG L
Sbjct: 125 LAE-DANLTFETRLALINELSFSSGAEGMVGGQQADMEAENKKITLEELATIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A A+  + +RLR F EN+G+ FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEATPEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231


>gi|21283203|ref|NP_646291.1| hypothetical protein MW1474 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486358|ref|YP_043579.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|253732175|ref|ZP_04866340.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|297207759|ref|ZP_06924194.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911840|ref|ZP_07129283.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70]
 gi|21204643|dbj|BAB95339.1| ispA [Staphylococcus aureus subsp. aureus MW2]
 gi|49244801|emb|CAG43248.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|253723964|gb|EES92693.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|296887776|gb|EFH26674.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886086|gb|EFK81288.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 293

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|15222767|ref|NP_175376.1| GGPS6 (geranylgeranyl pyrophosphate synthase 6);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|85540951|sp|O22043|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
           mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
           AltName: Full=Dimethylallyltranstransferase 6; AltName:
           Full=Farnesyl diphosphate synthase 6; AltName:
           Full=Farnesyltranstransferase 6; AltName:
           Full=Geranyltranstransferase 6; Flags: Precursor
 gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
 gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
 gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
          Length = 336

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 13/248 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVT 59
           +    S ++  +K I+  LD+ +    + +        +  A+RY LL GGK++R  L  
Sbjct: 29  DSEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCL 88

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L      TA+    A+E IH  SLI DDLP MD+  +RRGKPT H  + E T+I+A
Sbjct: 89  VACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILA 148

Query: 120 GNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEF 171
            N L + A  + ++S    +      + +  +   +G +G++ GQ  D        ++E 
Sbjct: 149 SNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNED 208

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +   + ++   KT  L+  A   GAIM   S  E ERL+ +   +G++FQ+ DD+LD  
Sbjct: 209 DELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 268

Query: 232 ---EDLPK 236
              E+L K
Sbjct: 269 KSSEELGK 276


>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
           acetoxidans DSM 684]
 gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
           acetoxidans DSM 684]
          Length = 297

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 131/236 (55%), Gaps = 11/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L + L    +R++  L   L       + QH  +L  A+ Y++  GGK++R  L+    
Sbjct: 2   DLKNYLTSQRQRVEEALAQTLPP-----KQQHPTQLHEAMHYSVFAGGKRLRPILMMAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L    A+E IH YSLIHDDLP+MD+  +RRG+PT H  + E TAI+AG+ 
Sbjct: 57  EAVGGDIENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDA 116

Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQV 177
           LLT AF ++S+P    Q+ D  R +++  L    G  GM+GGQ++D++ E +   D   V
Sbjct: 117 LLTEAFVVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             I   KTGAL+  +  +GA++  A+  + E L  FG+  G+ FQ+ADD+LD   D
Sbjct: 177 DYIHAHKTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGD 232


>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
 gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
           [Aromatoleum aromaticum EbN1]
          Length = 298

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 83/239 (34%), Positives = 127/239 (53%), Gaps = 11/239 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           MN    + ++   +R +T L++LL             RL  A+RYA+LGG K+IR  LV 
Sbjct: 4   MN--FLAWMEAIQRRSETALENLLPDANIA-----PARLHEAMRYAVLGGGKRIRPLLVH 56

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L         +V  A+E IH YSL+HDDLP MDN  +RRGKPTVH++YD+ TA++ 
Sbjct: 57  AAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPCMDNDVLRRGKPTVHVEYDDATALLV 116

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L   AF+ +S        + +  ++  L    G +GM GGQ +D     + +   ++
Sbjct: 117 GDSLQALAFQSLSEHPLTEDPSEQLSMITQLARASGSRGMAGGQAIDLAAVGKQLSREEL 176

Query: 178 FMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTGAL+  +   GA   A    +  ERL  +G+ +G++FQ+ DD+LD + D  
Sbjct: 177 EYMHIHKTGALIRASVLLGAACGARLDSDRLERLDHYGKLVGLLFQVVDDILDTQSDTA 235


>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
          Length = 327

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 124/236 (52%), Gaps = 6/236 (2%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L +        I+  L       AS  +      L  A+RYA+L GGK++R  LV   
Sbjct: 31  FDLRAWSAGQLAAIERALS---CWVASPDEAPAPAGLCDAMRYAVLDGGKRLRPLLVMAA 87

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +  N +  TALR   AIE IH YSL+HDD+P MDN  +RRGKPTVH+QY E  A++AG+
Sbjct: 88  CAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQYGEAQALLAGD 147

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
            L   AFE+++     +    +++L   L    G QGM GGQ +D+    +  T  Q+  
Sbjct: 148 ALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQGMAGGQAIDLASVGLPLTSAQLHE 207

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + ++KTGAL+  +   GA    AS      LR +G  +G+ FQ+ DD+LD   D  
Sbjct: 208 MHRLKTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDDILDVTADAA 263


>gi|15924511|ref|NP_372045.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927102|ref|NP_374635.1| hypothetical protein SA1352 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268006|ref|YP_001246949.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394073|ref|YP_001316748.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979840|ref|YP_001442099.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|253314891|ref|ZP_04838104.1| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255006308|ref|ZP_05144909.2| geranyltranstransferase-like protein [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257793598|ref|ZP_05642577.1| polyprenyl synthetase [Staphylococcus aureus A9781]
 gi|258411102|ref|ZP_05681382.1| polyprenyl synthetase [Staphylococcus aureus A9763]
 gi|258420094|ref|ZP_05683049.1| polyprenyl synthetase [Staphylococcus aureus A9719]
 gi|258437354|ref|ZP_05689338.1| polyprenyl synthetase [Staphylococcus aureus A9299]
 gi|258443560|ref|ZP_05691899.1| polyprenyl synthetase [Staphylococcus aureus A8115]
 gi|258446767|ref|ZP_05694921.1| polyprenyl synthetase [Staphylococcus aureus A6300]
 gi|258448681|ref|ZP_05696793.1| polyprenyl synthetase [Staphylococcus aureus A6224]
 gi|258453498|ref|ZP_05701476.1| polyprenyl synthetase [Staphylococcus aureus A5937]
 gi|269203151|ref|YP_003282420.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893023|ref|ZP_06301257.1| geranyltranstransferase [Staphylococcus aureus A8117]
 gi|282928993|ref|ZP_06336580.1| geranyltranstransferase [Staphylococcus aureus A10102]
 gi|295406644|ref|ZP_06816449.1| geranyltranstransferase [Staphylococcus aureus A8819]
 gi|296275122|ref|ZP_06857629.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus MR1]
 gi|297245773|ref|ZP_06929638.1| geranyltranstransferase [Staphylococcus aureus A8796]
 gi|13701320|dbj|BAB42614.1| ispA [Staphylococcus aureus subsp. aureus N315]
 gi|14247292|dbj|BAB57683.1| geranyltranstransferase homolog [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|147741075|gb|ABQ49373.1| farnesyl-diphosphate synthase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149946525|gb|ABR52461.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721975|dbj|BAF78392.1| geranyltranstransferase homolog [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|257787570|gb|EEV25910.1| polyprenyl synthetase [Staphylococcus aureus A9781]
 gi|257840252|gb|EEV64716.1| polyprenyl synthetase [Staphylococcus aureus A9763]
 gi|257843805|gb|EEV68199.1| polyprenyl synthetase [Staphylococcus aureus A9719]
 gi|257848559|gb|EEV72547.1| polyprenyl synthetase [Staphylococcus aureus A9299]
 gi|257850966|gb|EEV74909.1| polyprenyl synthetase [Staphylococcus aureus A8115]
 gi|257854342|gb|EEV77291.1| polyprenyl synthetase [Staphylococcus aureus A6300]
 gi|257857959|gb|EEV80848.1| polyprenyl synthetase [Staphylococcus aureus A6224]
 gi|257864229|gb|EEV86979.1| polyprenyl synthetase [Staphylococcus aureus A5937]
 gi|262075441|gb|ACY11414.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED98]
 gi|282589400|gb|EFB94491.1| geranyltranstransferase [Staphylococcus aureus A10102]
 gi|282764341|gb|EFC04467.1| geranyltranstransferase [Staphylococcus aureus A8117]
 gi|285817204|gb|ADC37691.1| Geranyltranstransferase (farnesyldiphosphate synthase)
           [Staphylococcus aureus 04-02981]
 gi|294968391|gb|EFG44415.1| geranyltranstransferase [Staphylococcus aureus A8819]
 gi|297177424|gb|EFH36676.1| geranyltranstransferase [Staphylococcus aureus A8796]
 gi|312829911|emb|CBX34753.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129799|gb|EFT85789.1| hypothetical protein CGSSa03_01898 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727336|gb|EGG63792.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21172]
 gi|329730812|gb|EGG67190.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus 21193]
          Length = 293

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGVK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067]
          Length = 293

 Score =  217 bits (554), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             +    ++D+ LL   +    +   +L  ++ Y++  GGK+IR  LV        V+ +
Sbjct: 7   FLEHYKKVVDESLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALQVDPM 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++V  A+E IH YSLIHDDLP+MDN   RRGK T H  Y + TAI+AG+ LLT AF I
Sbjct: 65  RGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++ + G +GM+GGQ  D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDEN-LSFETRIGLINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A AS  + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEASIEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
 gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
 gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
          Length = 303

 Score =  217 bits (554), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 16/237 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
            L+E ++ ++ +LD+LL             RL  A+RYA+LGG K++R+ LV        
Sbjct: 11  WLRERAQHVEHVLDELLPGADIA-----PTRLHEAMRYAVLGGGKRVRAALVYAAGQACP 65

Query: 67  VNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           VN  T        R  AA+E IH YSL+HDDLP MD+  +RRG+PTVH+Q+DE TA++AG
Sbjct: 66  VNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L   AFE+++     +   +  Q    L    G QGM GGQ +D+      +   ++ 
Sbjct: 126 DALQPLAFELLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D  
Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240


>gi|190150135|ref|YP_001968660.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307263471|ref|ZP_07545086.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189915266|gb|ACE61518.1| geranyltranstransferase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306871114|gb|EFN02843.1| Farnesyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 297

 Score =  217 bits (554), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 86/241 (35%), Positives = 137/241 (56%), Gaps = 11/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L + L    +RI+  L      T       ++  L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MSYSLSTDLSVIQQRINDFLS-----TKLKTYPAYDSALIEAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + +V         AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGRMLDVPFEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L ++AFE+I+  ++ L D+ + + + SL    G +GM  GQ LD   +D  ++  ++
Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVRQIQSLAQAAGARGMCLGQSLDLLAEDTAVNLAEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +I + KT AL+  +   G  ++  SQN   K+ L  + + +G+ FQ+ DD+LD   +  
Sbjct: 175 ELIHRNKTSALIIASVLMGFNLSAHSQNLAIKQPLERYAQAIGLAFQVQDDILDVIGETD 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|291538771|emb|CBL11882.1| Geranylgeranyl pyrophosphate synthase [Roseburia intestinalis
           XB6B4]
          Length = 296

 Score =  217 bits (554), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 10/234 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            + +++  ++   + I+   L +   + +T     ++ A+ Y+ L GGK++R  L+ E  
Sbjct: 2   DIKAEIGRHTDEAEQIITSYLPEEKGYQKT-----VIEAMNYSFLAGGKRLRPILMLETY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AAIE IH YSL+HDDLP+MDN   RRGK T H+ Y E  AI+AG+ 
Sbjct: 57  RLFGGRSKVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHVVYGEAMAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVF 178
           LLTYAFE  +        N    + +  L+   G+ GM+GGQ +D++ E      + ++ 
Sbjct: 117 LLTYAFETAAKALDIEPQNPGIGKAIRILSAKAGIYGMVGGQTVDVESENTCDMTKEKLD 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I ++KT AL+  +   GA++A A+ +E++ +      +G+ FQ+ DD+LD   
Sbjct: 177 FIYRLKTSALIEASMMIGAVLAGATGSEQKIVEAVASKVGLAFQIQDDILDVTS 230


>gi|260767267|ref|ZP_05876208.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           furnissii CIP 102972]
 gi|260617775|gb|EEX42953.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           furnissii CIP 102972]
 gi|315180898|gb|ADT87812.1| geranyltranstransferase [Vibrio furnissii NCTC 11218]
          Length = 294

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S    N++++D  L+ L            N  L+ A+RY  LLGGK+ R +LV 
Sbjct: 1   MIEALSSFQHRNNEQLDLWLNRL---------PNQNLPLIEAMRYGLLLGGKRARPYLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRGKPT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCEPSDLDTPASAIECIHAYSLIHDDLPAMDDDELRRGKPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++         + R +++ +L    G QGM  GQ LD+  E   +   +
Sbjct: 112 GDALQTLAFTILAEGTLSDAGEMNRVKMIQALAEASGAQGMCLGQALDLAAENRLVALDE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A     +    L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LENIHRNKTGALMRCAIRMGAMAAGHKGLDVLPHLDRYADAVGLAFQVQDDILDIISDTE 231


>gi|302751353|gb|ADL65530.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|320140593|gb|EFW32447.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144130|gb|EFW35899.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus MRSA177]
          Length = 288

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 2   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 61

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 62  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 122 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 181 VMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224


>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
 gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 289

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 128/234 (54%), Gaps = 12/234 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              +L++ ++ +D+ L                  L  ++ Y+L  GGK+IR  L    A 
Sbjct: 2   FQKELEDYARLVDSYLAQF---------PWPTGTLAESMNYSLSAGGKRIRPVLALAAAH 52

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +    L    A+E IH YSLIHDDLP+MDN   RRG+   H  + E  AI+AG+ L
Sbjct: 53  AVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDAL 112

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LTYAFE+I+ P + ++   + + +  +    G +GM+GGQMLD++ E   ++  ++  + 
Sbjct: 113 LTYAFELIAQPMSGVEPQRQLRAIREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVH 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++KTGA++  A   GAI+A  ++ + E L  + + +G+ FQ+ DD+LD E D  
Sbjct: 173 RLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSE 226


>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
 gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
          Length = 303

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 16/237 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
            L+E ++ ++ +LD+LL             RL  A+RYA+LGG K++R+ LV        
Sbjct: 11  WLRERAQHVEHVLDELLPGADIA-----PSRLHEAMRYAVLGGGKRVRAALVYAAGQACP 65

Query: 67  VNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           VN  T        R  AA+E IH YSL+HDDLP MD+  +RRG+PTVH+Q+DE TA++AG
Sbjct: 66  VNGSTLAVGASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L   AFE+++     +   +  Q    L    G QGM GGQ +D+      +   ++ 
Sbjct: 126 DALQPLAFELLA--GMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQ 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D  
Sbjct: 184 TMHSMKTGAMLACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTA 240


>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
          Length = 326

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 17/240 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
           +N  L +        I+  LD+ +         +H   +  A+RY++L  G K+    + 
Sbjct: 43  LNFDLRTYWTTLITEINQKLDEAI-------PVKHPAGIYEAMRYSVLAQGAKRAPPVMC 95

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                LF  + L A     A+E +H  SLIHDDLP MD+  +RRGKP+ H  Y    AI+
Sbjct: 96  VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155

Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           AG+ L   AF+ I S  P   +      +L+  +   +G  GM  GQ +D++      + 
Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +Q+ K GA+   +   G ++  A+++E + LR +G  +G+++Q+ DD+    ED  K
Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269


>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
 gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
          Length = 299

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 7/221 (3%)

Query: 17  DTILDDLLLQTASHMQTQHNDR--LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           D ++     +   ++      +  L  A+ Y+L  GGK+IR  L+         +     
Sbjct: 8   DKVIPSFEEEMLGYIGENGIKKAPLHEAMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGY 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E IH YSLIHDDLP+MDN  +RRGKPT HI Y E TAI+AG+ LLT AFEII+ 
Sbjct: 68  AVSAALEFIHTYSLIHDDLPAMDNDDLRRGKPTSHIVYGEDTAILAGDALLTQAFEIIA- 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
             +      + +L+L+L  + G +GM+ GQM DIQ E   +   ++  I + KTG L+ F
Sbjct: 127 -VSDASPEKKVKLILALAKSAGPEGMILGQMADIQGETKDLSLEELQFIHRNKTGELLKF 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +  ++A A+   +E+L  + E++G+ +Q+ DD+LD   
Sbjct: 186 PIYAACVIADAATEVEEQLMGYAEHIGLAYQIRDDILDVIG 226


>gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
          Length = 303

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 86/241 (35%), Positives = 131/241 (54%), Gaps = 16/241 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
             P  LQ   + ++ +LDDLL    +        RL  A+RYA+LGG K++R+ LV    
Sbjct: 7   AFPEWLQGRVRHVEDVLDDLLPPADA-----VPARLHEAMRYAVLGGGKRVRAALVYAAG 61

Query: 63  SLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               V+        +  R  AA+E IH YSL+HDDLP MD+  +RRG+PT H+Q+DE TA
Sbjct: 62  QACPVSGSVLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATA 121

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174
           ++AG+ L   AFE+++S    +   +  Q   SL    G QGM GGQ +D+      +  
Sbjct: 122 MLAGDALQPLAFELLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSR 179

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             + ++  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D 
Sbjct: 180 DDLQLMHSMKTGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADS 239

Query: 235 P 235
            
Sbjct: 240 A 240


>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
 gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
 gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
 gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
          Length = 296

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F+      +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKKLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
 gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
          Length = 296

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + L +    ++  LDD        +  +  + L  A+RY+LL GGK++R  L    
Sbjct: 5   FDFKAYLGKAKDTVEAALDD-------SLGPERPESLRDAMRYSLLAGGKRLRPILCLAA 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP+MD+  +RRG+PT H  Y E  AI+AG+
Sbjct: 58  CELAGGEAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLT AFE+++     +      +++  L+   G  G++GGQ++D++ E   +D   +  
Sbjct: 118 ALLTRAFEMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEY 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTGAL+     +GA++ +A       LR +   +G+ FQ+ DD+LD   
Sbjct: 178 IHLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITA 230


>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
 gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
 gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
 gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
           str. A2012]
 gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
           Hakam]
 gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
 gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
 gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
 gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
 gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
 gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I]
 gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
 gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
 gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
 gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
 gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
 gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
 gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
 gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
 gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
 gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
 gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
 gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus anthracis CI]
 gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
 gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
 gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
 gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
           Hakam]
 gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
 gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
 gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
 gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
 gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
 gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis Tsiankovskii-I]
 gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
 gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
 gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
 gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
 gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
 gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
 gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
 gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
          Length = 296

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F+      +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 303

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 131/242 (54%), Gaps = 15/242 (6%)

Query: 1   MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
           MN       +L+  +  I+ ++   L + + H +T     +L A+ Y+++ GGK++R  L
Sbjct: 1   MNDKETFKQELKTRTAEIEQLIKTYLPEESGHQKT-----ILEAMNYSMMTGGKRLRPML 55

Query: 58  VTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           + E   LF      + +   AA+E IH  SL+HDDLP MD+  +RRGKP+   ++ E   
Sbjct: 56  MQEMCRLFTGCLLESVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKPSTWAEFGEDIG 115

Query: 117 IIAGNGLLTYAFEIISSP-KTQLKDNIRSQL---MLSLTHNIGLQGMLGGQMLDIQDEF- 171
           ++ G+ L+ YAFE  +S  +T +  +  S++   M  L    G+ GM+GGQ +D++    
Sbjct: 116 VLTGDALMMYAFETAASAFETSIDPDELSRIGKAMGILARKTGVYGMIGGQTVDVELAGG 175

Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            I + ++  I ++KTGAL+  +   GA++  A+  + + +      +G+ FQ+ DD+LD 
Sbjct: 176 PIPKDKLDFIYRLKTGALIEASMLIGAVLGGAADEDCKIVESLARKIGMAFQIQDDILDV 235

Query: 231 EE 232
             
Sbjct: 236 TG 237


>gi|293392564|ref|ZP_06636884.1| geranyltranstransferase [Serratia odorifera DSM 4582]
 gi|291424966|gb|EFE98175.1| geranyltranstransferase [Serratia odorifera DSM 4582]
          Length = 300

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 10/239 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
               S+LQ   +R D  L   +          + D ++ A+R+ ALLGGK++R FLV   
Sbjct: 2   SDFNSQLQVYRQRADDALLGFIAPL-----PFNKDAMVEAMRHGALLGGKRLRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +F V+        AAIECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG+
Sbjct: 57  GEMFGVSLNNLDVPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGD 116

Query: 122 GLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L T AF I++      +    R  ++  L    G+ GM GGQ LD+  E   I+   + 
Sbjct: 117 ALQTLAFSILADADMPDVALRDRLAMVSELAGASGVAGMCGGQALDLAAEGRQINLEALE 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I ++KTGAL+  A   GA+ A         +L  +   +G+ FQ+ DD+LD   +  K
Sbjct: 177 QIHRLKTGALIRAAVRLGALAAGEPGRAALVQLDRYAAAIGLAFQVQDDILDVIGETAK 235


>gi|253733229|ref|ZP_04867394.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253728769|gb|EES97498.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 288

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 2   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 61

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 62  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 122 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224


>gi|78223142|ref|YP_384889.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15]
 gi|78194397|gb|ABB32164.1| farnesyl-diphosphate synthase [Geobacter metallireducens GS-15]
          Length = 297

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 85/235 (36%), Positives = 126/235 (53%), Gaps = 11/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L + L+E    +D  L+  L       +      +  A+RY++  GGK+IR  L+    
Sbjct: 2   DLKNYLKERCAIVDEALERSLP-----GEGDLPVSVHRAMRYSVFAGGKRIRPVLMLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    AL    A+E IH YSLIHDDLP+MD+   RRG+PT H  + E  AI+AG+ 
Sbjct: 57  EAVGGTPDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           LLT AF ++SSP+   K        ++  +    G +GM+GGQ++D++ E    ID   V
Sbjct: 117 LLTEAFILMSSPEYAAKAGHARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGALM  + ++GAI+  A  +    +  +GE +G+ FQ+ADD+LD E 
Sbjct: 177 QYIHTHKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEG 231


>gi|302333198|gb|ADL23391.1| putative geranyltranstransferase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 288

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 2   NKLIDEVNNELSVAINKSVLDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 61

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 62  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 122 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224


>gi|294139891|ref|YP_003555869.1| geranyltranstransferase [Shewanella violacea DSS12]
 gi|293326360|dbj|BAJ01091.1| geranyltranstransferase [Shewanella violacea DSS12]
          Length = 293

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 138/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   +    +R+D+ L+ ++       QT  + +LL+AI++ ALLGGK+IR FLV     
Sbjct: 2   LIDTITRYQQRVDSQLEKII-----DAQTITDPKLLAAIKHGALLGGKRIRPFLVYAIGD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + N+         AAIEC+H YSLIHDDLP+MD+  +RRG+PTVH+ +DE TAI+AG+ L
Sbjct: 57  MLNIPLKKLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
               FEII  P   ++ +    ++ +L    G  GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QALGFEIICEPIDGIEPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           K+KTGAL+  A E   I A  S  E+  L  F + +G+ FQ+ DD+LD     E+L K
Sbjct: 177 KLKTGALIRCAVELPMIAAQVSPEEQTLLLEFADTIGLAFQVQDDVLDIISSTEELGK 234


>gi|23502633|ref|NP_698760.1| geranyltranstransferase [Brucella suis 1330]
 gi|161619701|ref|YP_001593588.1| polyprenyl synthetase [Brucella canis ATCC 23365]
 gi|254703547|ref|ZP_05165375.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
 gi|260568852|ref|ZP_05839320.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
 gi|261754180|ref|ZP_05997889.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
 gi|23348639|gb|AAN30675.1| geranyltranstransferase [Brucella suis 1330]
 gi|161336512|gb|ABX62817.1| Polyprenyl synthetase [Brucella canis ATCC 23365]
 gi|260154236|gb|EEW89318.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
 gi|261743933|gb|EEY31859.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
          Length = 304

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + L   +  ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A
Sbjct: 7   DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF       LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ 
Sbjct: 67  ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLTYAF+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEASIITL 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241


>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
          Length = 297

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 9/236 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M        + +  RI+  L  LL            +RL  A+RY +LGG K++R  L  
Sbjct: 1   MTADFQDWARSHQVRIENSLQTLLPAAD-----VAPERLHEAMRYTVLGGGKRVRPLLAF 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L   N         A+E IH YSL+HDDLP MD+  +RRGKPT HI+Y E  A++ 
Sbjct: 56  AAGELNKANEERVTIAAIAVELIHVYSLVHDDLPCMDDDVLRRGKPTCHIEYGEAIALLT 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177
           G+ L + AF++++         ++ +++  L    G +GM GGQ +D+      +   ++
Sbjct: 116 GDSLQSLAFQLLAEYSLADTPKMQLEMIRRLAQAAGSRGMAGGQAVDLASVGRTLSLPEL 175

Query: 178 FMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTGAL+  A   GA       + +   L  F + +G+ FQ+ DD+LD E 
Sbjct: 176 EFMHIHKTGALIRAAVMLGAYCGSRLDEAQLAALDHFAKCIGLAFQVVDDVLDAEA 231


>gi|52080961|ref|YP_079752.1| polyprenyl synthetase,polyprenyl synthetase [Bacillus licheniformis
           ATCC 14580]
 gi|52786337|ref|YP_092166.1| YqiD [Bacillus licheniformis ATCC 14580]
 gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
 gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
           ATCC 14580]
 gi|52348839|gb|AAU41473.1| YqiD [Bacillus licheniformis ATCC 14580]
 gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
          Length = 296

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 91/240 (37%), Positives = 134/240 (55%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M G L   L+     I+  L   +         Q    L  ++ Y+L  GGK++R  LV 
Sbjct: 1   MTGKLEGFLKSRKTVIEERLPMYIKDL------QAPSILKESMLYSLEAGGKRLRPILVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  Y E TAI+A
Sbjct: 55  ALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKIYGEATAILA 114

Query: 120 GNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
           G+ LLT +F++I S+  + +    R +L+  L    G +GM+GGQ+LD++ E   +   +
Sbjct: 115 GDALLTESFKMITSNMPSDVSAEKRIRLVNELISAAGAEGMVGGQILDMEAESKSVSLDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I + KT  L+ F+  +GAI+A AS+ E E+LR F  ++GI FQ+ DD+LD E    K
Sbjct: 175 LQRIHEGKTAKLLSFSVIAGAILADASEKEIEKLREFSHHIGIGFQIRDDILDLEGSEDK 234


>gi|254518734|ref|ZP_05130790.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912483|gb|EEH97684.1| polyprenyl synthetase [Clostridium sp. 7_2_43FAA]
          Length = 291

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 8/207 (3%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +N  +  +  Y+L +GGK+IR  L      L+  N+   + + +AIE IH YSLIHDDLP
Sbjct: 26  YNKIIYDSASYSLNIGGKRIRPILFLLTYGLYKENYKDVIEMASAIEMIHTYSLIHDDLP 85

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLT 151
            MDN  +RRG PT H ++ E  A++AG+ LL  A  ++   S K   K  + S+ +    
Sbjct: 86  CMDNDDLRRGMPTNHKKFGENIAVLAGDMLLNEAMSLMIKFSIKNGAKALLASREI---A 142

Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM+GGQ++D+ +E   I + ++  +   KTG L+  +  + AI+A A + + E 
Sbjct: 143 EAAGPEGMIGGQIVDVINEGKLISKEELLYMHSKKTGELIRVSIIAAAILADAPKKDIEI 202

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           L  FG  LG+ FQ+ DD+LD   D+ K
Sbjct: 203 LNDFGLKLGLAFQIKDDILDITGDISK 229


>gi|15233848|ref|NP_195558.1| GGR (geranylgeranyl reductase); farnesyltranstransferase
           [Arabidopsis thaliana]
 gi|85680919|sp|Q39108|GGR_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase-related
           protein, chloroplastic; Flags: Precursor
 gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
           [Arabidopsis thaliana]
 gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
           [Arabidopsis thaliana]
 gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
 gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
           thaliana]
 gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
           thaliana]
 gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
 gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
           thaliana]
 gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
          Length = 326

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 117/240 (48%), Gaps = 17/240 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
           +N  L +        I+  LD+ +         +H   +  A+RY++L  G K+    + 
Sbjct: 43  LNFDLRTYWTTLITEINQKLDEAI-------PVKHPAGIYEAMRYSVLAQGAKRAPPVMC 95

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                LF  + L A     A+E +H  SLIHDDLP MD+  +RRGKP+ H  Y    AI+
Sbjct: 96  VAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAIL 155

Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           AG+ L   AF+ I S  P   +      +L+  +   +G  GM  GQ +D++      + 
Sbjct: 156 AGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLS- 214

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +Q+ K GA+   +   G ++  A+++E + LR +G  +G+++Q+ DD+    ED  K
Sbjct: 215 --FVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI---TEDKKK 269


>gi|240103885|ref|YP_002960194.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Thermococcus gammatolerans EJ3]
 gi|239911439|gb|ACS34330.1| Bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Thermococcus gammatolerans EJ3]
          Length = 343

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 17/237 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECA 62
            L +++++ +  +D I+ +L+ +       +    L  A R Y L GGK++R F+V    
Sbjct: 6   ELFTRIRKLAGDVDKIILELVPE-------KEPKTLYDAARHYPLAGGKRVRPFVVLRAT 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   AL   AA+E IH YSL+HDD+  MD   +RRG+PTVH  +    AI+AG+ 
Sbjct: 59  EAVGGDPEKALYPAAAVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKVWGINMAILAGDL 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFM 179
           L + AFE ++  K       R   +L  T N     +  GQ LDI+ E  DE    +   
Sbjct: 117 LFSKAFEAVAKAKVDPDKKARILEVLVKTSN----ELCEGQALDIEFETRDEVTVDEYLK 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +   KTGAL   +   GAI+   ++   + L  +G N+GI FQ+ DD+LD   D  K
Sbjct: 173 MISGKTGALFDGSATIGAIVGTDNEEYIQALSKWGRNVGIAFQIWDDVLDLIADEKK 229


>gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 293

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 87/231 (37%), Positives = 132/231 (57%), Gaps = 6/231 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L    +    ++D+ LL   +    +   +L  ++ Y++  GGK+IR  LV        V
Sbjct: 4   LSLFLEHYKKVVDESLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALQV 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           + ++ ++V  A+E IH YSLIHDDLP+MDN   RRGK T H  Y + TAI+AG+ LLT A
Sbjct: 62  DPMSGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTLA 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F I++  +  L    R  L+  ++ + G +GM+GGQ  D++ E   +   ++  I   KT
Sbjct: 122 FSILAEDEN-LSFETRIGLINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKT 180

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           G L+ FA  S A +A AS  + +RLR F EN+G+ FQ++DD+LD   D  K
Sbjct: 181 GELLIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231


>gi|167756949|ref|ZP_02429076.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402]
 gi|237734652|ref|ZP_04565133.1| geranyltranstransferase [Mollicutes bacterium D7]
 gi|167703124|gb|EDS17703.1| hypothetical protein CLORAM_02498 [Clostridium ramosum DSM 1402]
 gi|229382472|gb|EEO32563.1| geranyltranstransferase [Coprobacillus sp. D7]
          Length = 282

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/227 (34%), Positives = 133/227 (58%), Gaps = 10/227 (4%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           + +++ +  +    ++   + ++  A++Y+L+ GGK+IR  ++ +    ++ N+   L +
Sbjct: 2   ENLIEQINERLLEIIEEFGDSKVKEAMKYSLMAGGKRIRPVMMLQVIRSYDKNYQDYLDI 61

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIE IH YSLIHDDLP MDN  +RRG+ T H Q+DE TAI+AG+ LL  A  +I   K
Sbjct: 62  ACAIEMIHTYSLIHDDLPGMDNDDLRRGRLTCHKQFDEATAILAGDALLNEAVNVI--IK 119

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193
           T++ D ++  L+ +L    G+ GM+ GQ LD++ E       Q+ +I   KTG L+  A 
Sbjct: 120 TKVPDELKISLLATLYQASGINGMILGQALDMEYETKLATRDQLDLIHHHKTGDLISAAM 179

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GA++A  + ++++     G  +G+ FQ+ DD+LD   D   L KK
Sbjct: 180 KMGALIA--NPDDQKTWVEIGYKIGLAFQIQDDVLDVVGDSSLLGKK 224


>gi|313205981|ref|YP_004045158.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445297|gb|ADQ81652.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
 gi|325336579|gb|ADZ12853.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer
           RA-GD]
          Length = 323

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 16/224 (7%)

Query: 22  DLLLQT-ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           DL+ +    H        L   + Y +  GGK++R  +V     LF  +   A++   AI
Sbjct: 9   DLVAEAIEKHQFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELFGGSLEKAMKPALAI 68

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H ++LIHDD+  MD+  +RR KPT+H  +     I++G+ LL  A++        L+
Sbjct: 69  EFFHNFTLIHDDI--MDDAPLRRNKPTIHTLHGINVGILSGDALLIKAYQFF----EDLE 122

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESG 196
             +  + +   +    +  +  GQ +D+  E    +       +   KTG L   + + G
Sbjct: 123 PELFKKCITLFSETGAV--LCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSAASFKIG 180

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           A++A A++ E E L  FG+++GI FQ+ DD LD   +     KK
Sbjct: 181 AMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKK 224


>gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171]
          Length = 293

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             +    ++D+ LL   +    +   +L  ++ Y++  GGK+IR  LV         + +
Sbjct: 7   FLEHYKKVVDESLLTEINKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALQADPM 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++V  A+E IH YSLIHDDLP+MDN   RRGK T H  Y + TAI+AG+ LLT AF I
Sbjct: 65  RGVKVATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVYGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++ + G +GM+GGQ  D++ E   +   ++  I   KTG L
Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQQADMEAENKQVTLAELTSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A AS  + +RLR F EN+G+ FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEASIEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231


>gi|188996777|ref|YP_001931028.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931844|gb|ACD66474.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 287

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/236 (38%), Positives = 137/236 (58%), Gaps = 14/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + L+E +  I+  LD  + +          + L +A+RY+L  GGK+IR  LV ECA
Sbjct: 2   EFKNILKEKASFINKQLDRFVPRCI-------PEELSNAMRYSLEAGGKRIRPILVIECA 54

Query: 63  SLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                +VN    + +  + E IH YSLIHDDLP+MD+  +RRGKPT H  + E  AI+AG
Sbjct: 55  KAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAG 114

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +GLLT+AFE+IS+   +L      +++  L+HN+G+ GM+GGQ  DI   F D   V  I
Sbjct: 115 DGLLTFAFELISN-NKKLSAEKIVKVINILSHNVGIYGMVGGQAADILPNFKD---VEFI 170

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KT   +   C+ G ++A A++ E  +L+ +G N+G+ FQ+ DD+LD   D  K
Sbjct: 171 HLNKTAKFLSACCQIGCVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEK 226


>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
 gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
 gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
          Length = 296

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F+      +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYRQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|82751126|ref|YP_416867.1| geranyltranstransferase [Staphylococcus aureus RF122]
 gi|258423175|ref|ZP_05686068.1| geranyltranstransferase [Staphylococcus aureus A9635]
 gi|82656657|emb|CAI81083.1| geranyltranstransferase [Staphylococcus aureus RF122]
 gi|257846625|gb|EEV70646.1| geranyltranstransferase [Staphylococcus aureus A9635]
          Length = 293

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   I+   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|323440419|gb|EGA98131.1| geranyltranstransferase [Staphylococcus aureus O11]
 gi|323443193|gb|EGB00811.1| geranyltranstransferase [Staphylococcus aureus O46]
          Length = 288

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 2   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 61

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 62  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 122 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 180

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 181 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 224


>gi|84394354|ref|ZP_00993075.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01]
 gi|84375013|gb|EAP91939.1| Geranylgeranyl pyrophosphate synthase [Vibrio splendidus 12B01]
          Length = 294

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S    N+++++  LD L            N  L++A+RY  LLGGK+ R FLV 
Sbjct: 1   MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG  T HI+YDE TAI+ 
Sbjct: 52  ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R +++  L    G QGM  GQ LDI+ E   +   +
Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + + KTGALM  A   GA+ A         +L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231


>gi|261252274|ref|ZP_05944847.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           orientalis CIP 102891]
 gi|260935665|gb|EEX91654.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           orientalis CIP 102891]
          Length = 294

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 122/240 (50%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N+ +++  L  L            N  L+ A+RY  LLGGK+ R FLV 
Sbjct: 1   MQEALTSFQQRNNDQLNLWLQAL---------PHQNQPLIEAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +   +        +A+ECIH YSLIHDDLP+MD+  +RRG+ T HI++DE TAI+ 
Sbjct: 52  ITGQMLGCDKSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGQTTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++         + R +++  L    G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTILADGDLHPNAEVNRIKMIKVLADASGANGMCLGQALDLAAENRSVSLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGALM  A   GA+ A         +L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEIHRNKTGALMKSAIRLGALAAGEKGLEVMPQLDKYADAVGLAFQVQDDILDIVSDTE 231


>gi|86147429|ref|ZP_01065741.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222]
 gi|85834722|gb|EAQ52868.1| Geranylgeranyl pyrophosphate synthase [Vibrio sp. MED222]
          Length = 294

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S    N+++++  LD L            N  L++A+RY  LLGGK+ R FLV 
Sbjct: 1   MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG  T HI+YDE TAI+ 
Sbjct: 52  ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R +++  L    G QGM  GQ LDI+ E   +   +
Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + + KTGALM  A   GA+ A         +L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231


>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
 gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
 gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
          Length = 296

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 9/232 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
            +     R +  L+  L    +        RL  A+RYA+LGG K++R  L         
Sbjct: 7   WVNALQARAERALEKTLPPANNP-----PKRLHEAMRYAVLGGGKRLRPLLTYSAGIALG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V+        +A+E IH YSL+HDDLPSMDN  +RRG PT H  + E TA++AG+ L   
Sbjct: 62  VSEAVLDAPASAVELIHAYSLVHDDLPSMDNDSLRRGHPTCHKAFGETTALLAGDALQAL 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           AF  ++ P + +    +  ++  L    G +GM GGQ +D+      +  +++  + ++K
Sbjct: 122 AFRTLAEPTSAIPAKNQINMLELLAEAAGSRGMAGGQAIDLDSVGVQLTLSEMETMHRLK 181

Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           TGAL+  +   GA      +Q+  E L  F + +G+ FQ+ DD+LD E D  
Sbjct: 182 TGALIRASVLLGAWCHPEITQDTLENLDRFAQCIGLAFQIQDDVLDVESDTA 233


>gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44]
 gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44]
          Length = 292

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L  + + I+  L ++L     +   Q  ++L  ++ Y+L+ GGK+IR  L      
Sbjct: 2   FKDYLASSKQNIEQWLGEVL-----NSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + +           A+ECIH YSL+HDDLP+MDN   RRG  T H  Y E  AI+AG+GL
Sbjct: 57  MLHKEPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
           LTYAF++++S  T      +   +  +    G +GM+GGQ  D   +D+ I   ++ ++ 
Sbjct: 117 LTYAFQLMTS-NTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTGAL   + E G I+  A+   +  L  +   LG++FQ+ DD+LD      +L K
Sbjct: 176 TGKTGALFNASVELGLILGCANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGK 233


>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
 gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
          Length = 296

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 135/236 (57%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F+      +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMKAEGKQLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K KTG L+ FA  +G+I++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEG 230


>gi|283470800|emb|CAQ50011.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Staphylococcus aureus subsp. aureus ST398]
          Length = 293

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  H   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTKHELGMK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   I+   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPINLETLEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
 gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
          Length = 300

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 13/241 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M       ++   +R++   ++ L Q A         +L SA+RY+++GG K++R  LV 
Sbjct: 1   MTVAFKDWVKACQQRVEKAAENNLPQEALI-----PQKLHSAMRYSVIGGGKRVRPLLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +++ +         A+EC+H YSLIHDDLP MDN  +R GKPT H  + E  A++A
Sbjct: 56  AVGQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHTAFGEAVAMLA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQ 176
           G+ L   AF  +   +T+L    R +L+  L +    +GM GGQ +D+    ++ +   +
Sbjct: 116 GDALQPEAFLFLV--RTKLPAEQRIKLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEE 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           + ++  MKTGAL+  +   GA       SQ++  +L  +G  +G+ FQ+ DD+LD   D 
Sbjct: 174 LRLMHSMKTGALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDT 233

Query: 235 P 235
            
Sbjct: 234 A 234


>gi|75274213|sp|Q9LUD9|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
           chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
           AltName: Full=Dimethylallyltranstransferase 3; AltName:
           Full=Farnesyl diphosphate synthase 3; AltName:
           Full=Farnesyltranstransferase 3; AltName:
           Full=Geranyltranstransferase 3; Flags: Precursor
 gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 360

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   ++ ++  LD         +  +    +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L    R  + ++ L   IG  G++ GQM+D+  E ++       
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            +  I   KT AL+  A   G IM   ++ E E+LR +   +G++FQ+ DD+LD     E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296

Query: 233 DLPK 236
           +L K
Sbjct: 297 ELGK 300


>gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
           geranyltranstransferase [Melissococcus plutonius ATCC
           35311]
 gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
           geranyltranstransferase (farnesyldiphosphate synthase)/
           geranylgeranyl pyrophosphate synthetase [Melissococcus
           plutonius ATCC 35311]
          Length = 296

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 12/233 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             K ID I  ++     SH   Q    L  A+ Y++  GGK++R  L+    + FN    
Sbjct: 8   KQKHIDRIEKEMANFIESHTSDQS---LKKAMLYSIQAGGKRLRPLLLLATINSFNCPIE 64

Query: 71  T-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A +  AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF+
Sbjct: 65  QGAYQTAAALEMLHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEALAILAGDGLLTGAFQ 124

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGA 187
           +++    +    I    +L  T   G +GM+ GQ  D+Q E   ++  ++  + + KTGA
Sbjct: 125 LLALSTIEAGKKILLTQLLGQT--AGTEGMVAGQSGDLQGEKKALNLQELSEVHRKKTGA 182

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           L+ F+  +G I+A+ S+     L+      G+ FQ+ DDLLD    EE   KK
Sbjct: 183 LIEFSFMAGGILANQSEEIIYLLKQLANAFGLAFQIRDDLLDVIGSEEKQGKK 235


>gi|170727812|ref|YP_001761838.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908]
 gi|169813159|gb|ACA87743.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908]
          Length = 293

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/238 (38%), Positives = 137/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L     +  +R+D  L  ++       Q+  + +LL+A+++ AL+GGK+IR FLV     
Sbjct: 2   LAQATTQYQQRVDNQLTQVI-----DAQSVTDSQLLAAMKHGALIGGKRIRPFLVYAIGE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + NV         AAIECIH YSLIHDDLP+MD+  +RRG+PTVH+ +DE TAI+AG+ L
Sbjct: 57  MLNVPQEKLDAAAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
              AF+I+S P   L       ++ +L    G  GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QALAFDILSQPIDGLTPTQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           K+KTGAL+  A E   I A   ++E+  L  F + +G+ FQ+ DD++D     E+L K
Sbjct: 177 KLKTGALIRCAVELPMIAADLPKDEQALLMTFADAVGLAFQVQDDVIDIISSTEELGK 234


>gi|58584994|ref|YP_198567.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|58419310|gb|AAW71325.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 305

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/249 (35%), Positives = 131/249 (52%), Gaps = 39/249 (15%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+ +    +     +RL+SA+RY LL   K IR FLV   + +FNV     + +  A+EC
Sbjct: 10  LITEINKILPEDSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVEC 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP MDN   RRG+ + H ++D+ TA++AG+ LLT AFEI+SS       N
Sbjct: 70  IHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEG--SN 127

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLD--------IQDEFIDETQ----------------- 176
            R +++ +L+  IG +GM+GGQ+LD           +++D                    
Sbjct: 128 KRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTL 187

Query: 177 -----------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                      +  I  MKT  L   +CE GAI+  A+  ++  L  +G NLG+IFQ  D
Sbjct: 188 GSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKD 247

Query: 226 DLLDCEEDL 234
           D+ D ++D 
Sbjct: 248 DIRDYKQDE 256


>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
 gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
          Length = 297

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 8/237 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           +      + +  + ++T L   L        T     L  A+RYA L GGK++R  LV  
Sbjct: 3   DTDFLRWMTDIQQHVETALAASLP-----AGTHAATPLFDAMRYAALDGGKRVRPLLVFA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +             A+ECIH YSL+HDDLP MD+  +RRGKPT HI + E  A++AG
Sbjct: 58  AGDVSGATPEALSAAACAVECIHAYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
           + L  +AFE+++ P   +    +  ++ +L H  G +GM GGQ +D       +D+T + 
Sbjct: 118 DALQAHAFELLAIPLPGVVPARQLAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALE 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+      +E   L  +   +G+ FQ+ DD+LDCE D  
Sbjct: 178 YMHCLKTGALIQAAVRLGALAGSPDDDELAALDRYARRIGLAFQVIDDVLDCEADSA 234


>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
           thaliana]
          Length = 360

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   ++ ++  LD         +  +    +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L    R  + ++ L   IG  G++ GQM+D+  E ++       
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLE 236

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            +  I   KT AL+  A   G IM   ++ E E+LR +   +G++FQ+ DD+LD     E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296

Query: 233 DLPK 236
           +L K
Sbjct: 297 ELGK 300


>gi|255065407|ref|ZP_05317262.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
 gi|255050232|gb|EET45696.1| geranyltranstransferase [Neisseria sicca ATCC 29256]
          Length = 298

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 12/241 (4%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
           MN    L +  Q+   + + +L+  L       + Q    L  A+RY  L GGK++R  L
Sbjct: 1   MNPANELKAWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V   + L + +     +  AAIE +H YSL+HDD+P+MDN  +RRGKPT H++YDE TA+
Sbjct: 56  VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           + G+ L T AF+++S P T L    +  ++ +L    G  GM GGQ +D+ +  + +++ 
Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           Q+  +  +KTG L+  A   GA+       N+   L  +   LG+ FQ+ DD+LDCE D 
Sbjct: 175 QLEQMHSLKTGTLIRAAVVLGALACPDLDSNDVRTLDNYAAKLGLAFQVIDDVLDCEADT 234

Query: 235 P 235
            
Sbjct: 235 A 235


>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
 gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
          Length = 291

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 9/231 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +  + +E  + ++  L   L +T        +D L  A+ Y+L+ GGK++R  L+   A 
Sbjct: 1   MKERWRERQELVERALQAELDRTD-----VLDDTLRQAMAYSLMAGGKRLRPVLLMAAAD 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +    L V  A+E IH YSLIHDDLP+MDN   RRGK T H  + +  AI+AG+GL
Sbjct: 56  AVGADGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT AF +I   +  +  +   +++  ++   G +GM+GGQ+LD++ E   I   ++  + 
Sbjct: 116 LTLAFTVILRQQN-VSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KTGAL   A  SGAI+  AS+ +   L  + E  G+ FQ+ DD+LD   
Sbjct: 175 MGKTGALFRAALRSGAILGGASEAQLAALTTYAEQFGLAFQITDDILDVIG 225


>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 343

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 13/248 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVT 59
           +    S +   +K I+  LD+ +    + +        +  A+RY LL GGK++R  L  
Sbjct: 36  DSEFISYMNNKAKSINKALDNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCL 95

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L      TA+    A+E IH  SLI DDLP MD+  +RRG PT H  + E T+I+A
Sbjct: 96  VACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSILA 155

Query: 120 GNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEF 171
            N L++ A  + ++S    +      + +  +   +G +G++ GQ  D        ++E 
Sbjct: 156 SNALMSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNED 215

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +   + ++   KT  L+  A   GAIM   S  E ERL+ +   +G++FQ+ DD+LD  
Sbjct: 216 DELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDET 275

Query: 232 ---EDLPK 236
              E+L K
Sbjct: 276 KSSEELGK 283


>gi|163749512|ref|ZP_02156760.1| geranyltranstransferase [Shewanella benthica KT99]
 gi|161330921|gb|EDQ01848.1| geranyltranstransferase [Shewanella benthica KT99]
          Length = 293

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/238 (37%), Positives = 137/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   +    +R+D+ L+ +        QT  + +LL+A+++ ALLGGK+IR FLV     
Sbjct: 2   LVDTITRYQQRVDSQLEKIFDN-----QTVTDPKLLAAMKHGALLGGKRIRPFLVYAIGD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + ++         AAIEC+H YSLIHDDLP+MD+  +RRG+PTVH+ +DE  AI+AG+ L
Sbjct: 57  MLSIPLKQLDSSAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEAAAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
              AFE++  P  ++       ++ +L    G  GM GGQ +D+   ++ ID   +  + 
Sbjct: 117 QALAFEVMCEPIDEIAPRQNLAMVRALAKASGYSGMCGGQAMDLSATNKPIDLATLSQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           K+KTGAL+  A E   I A  SQ E+  L  F + +G+ FQ+ DD+LD     ++L K
Sbjct: 177 KLKTGALIRCAVELPMIAAQVSQEEQTLLMEFADAIGLAFQVQDDVLDIISSTDELGK 234


>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
 gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
          Length = 289

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 125/212 (58%), Gaps = 9/212 (4%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIH 89
           +  + ++L  ++RY++  GGK+IR  L+    +L+  N   A+ +V AA+E +H YSLIH
Sbjct: 21  EQTNEEQLAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVAAAVELVHTYSLIH 80

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF+++     +L D+ +   +  
Sbjct: 81  DDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLGQA--ELADDKKVACLTL 138

Query: 150 LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G  GM+ GQ  DI+ E   +   Q+  I   KTG L+ F+  +G I+  AS  E+
Sbjct: 139 LAQTAGTLGMVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVIAGGIIGGASAKEQ 198

Query: 208 ERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            +L  F   LG+ FQ+ DDLLD     E+L K
Sbjct: 199 AQLDSFARKLGLAFQIKDDLLDVLATTEELGK 230


>gi|300715575|ref|YP_003740378.1| Geranyltranstransferase [Erwinia billingiae Eb661]
 gi|299061411|emb|CAX58523.1| Geranyltranstransferase [Erwinia billingiae Eb661]
          Length = 299

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 125/242 (51%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L  +  R++  L   +           N  L++A+ Y ALLGGK++R FLV    
Sbjct: 2   DFSDLLTAHHTRVNQALQRFIAPL-----PFQNSPLVNAMEYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +        AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E TAI+AG+ 
Sbjct: 57  EMLGADDAALDAPAAAVECIHAYSLIHDDLPAMDDDSLRRGQPTCHIKFGEDTAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P   +    R  ++  L    G+ GM GGQ LD+  E   +D   +  
Sbjct: 117 LQTLAFSILADTPMPGVSAEYRVAMLSELAQASGVAGMCGGQALDLAAEGQQVDLAALEQ 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  +   +G+ FQ+ DD+LD   D   + 
Sbjct: 177 IHRHKTGALIRSAVRLGALAAGERGRAALPALDRYANAIGLAFQVQDDILDVVGDTAIIG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|296533686|ref|ZP_06896240.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
 gi|296265985|gb|EFH12056.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
          Length = 300

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 101/239 (42%), Positives = 146/239 (61%), Gaps = 12/239 (5%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
           M G   L + L+E +  I+  LD LL Q           +L +A+RY++LGG K++R FL
Sbjct: 1   MTGDTPLSAALREAAAEIEHTLDMLLPQEEGP-----EAKLYAAMRYSVLGGGKRMRGFL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V E A+ F V+ ++ALRV AAIE +H YSL+HDDLP+MDN  +RRGKPT H  Y E TAI
Sbjct: 56  VLEGAAQFGVSRVSALRVAAAIEMLHAYSLVHDDLPAMDNDELRRGKPTTHRAYGEATAI 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFID 173
           +AG+ L  +AF +++   T     +R++L L L    G +GM GGQMLD+      E + 
Sbjct: 116 LAGDALQAHAFAVLAGEDTHSDPAVRAELCLRLALAAGSKGMCGGQMLDMLAEEATEALS 175

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           E+ +  +Q +KTG L+ F+ E+GA++  A   ++  L  +G  LG  FQ+ADD+LD   
Sbjct: 176 ESAIGRLQLLKTGKLIEFSAEAGAVLGKAPGPQRHALCAYGRELGAAFQIADDILDATA 234


>gi|218710368|ref|YP_002417989.1| geranyltranstransferase [Vibrio splendidus LGP32]
 gi|218323387|emb|CAV19564.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
           splendidus LGP32]
          Length = 294

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S    N+++++  LD L            N  L++A+RY  LLGGK+ R FLV 
Sbjct: 1   MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG  T HI+YDE TAI+ 
Sbjct: 52  ITGEMLGCTAEELDTPASAIECIHAYSLIHDDLPAMDDDELRRGHQTCHIKYDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R +++  L    G QGM  GQ LDI+ E   +   +
Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRSVTLEE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + + KTGALM  A   GA+ A         +L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVMPQLDKYADAIGLAFQVQDDILDIISDTE 231


>gi|298694804|gb|ADI98026.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus ED133]
          Length = 293

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLEILEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+     KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
          Length = 338

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 12/234 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +      I+  LD       S +      +L  A+RY LL GGK++R  +    
Sbjct: 44  FDFKSYMINKITSINEALD-------SAVPLIEPIKLHEAMRYTLLSGGKRVRPIVCIAA 96

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  T +    A E IH  S++ DDLP MDN   RRGK + H  Y E   ++A  
Sbjct: 97  CELVGGHESTVMPTACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKITLLAVR 156

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD----IQDEFIDETQV 177
            L   A + + +    +      + +  +    G +G   GQ+ D     +D  +   Q+
Sbjct: 157 SLQALAVDHVVTATRGVPPERLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNVSIEQL 216

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             I   KTG L   +  SGAI+  AS+ E E+LR F + +G++FQ+ DD+LD  
Sbjct: 217 EHIHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVT 270


>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 290

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 12/234 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              +L++ ++ +D+ L                  L  ++ Y+L  GGK+IR  L    A 
Sbjct: 3   FQKELEDYARLVDSYLAQF---------PWPTGTLAESMNYSLSAGGKRIRPVLALAAAH 53

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +    L    A+E IH YSLIHDDLP+MDN   RRG+   H  + E  AI+AG+ L
Sbjct: 54  AVGGDCEDILPAVCALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGQAILAGDAL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LTYAFE+++ P + +    + + +  +    G +GM+GGQMLD++ E   ++  ++  + 
Sbjct: 114 LTYAFELLAQPMSGVDSQRQLRAVREVAQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVH 173

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++KTGA++  A   GAI+A  ++ + E L  + + +G+ FQ+ DD+LD E D  
Sbjct: 174 RLKTGAILVVAARLGAILAGGTEEKIEALTSYAQAIGLAFQIKDDILDLESDSE 227


>gi|317047156|ref|YP_004114804.1| polyprenyl synthetase [Pantoea sp. At-9b]
 gi|316948773|gb|ADU68248.1| Polyprenyl synthetase [Pantoea sp. At-9b]
          Length = 299

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 88/237 (37%), Positives = 126/237 (53%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L    +R++  L  LL           +  L++A++Y ALLGGK++R FLV    
Sbjct: 2   DFAKLLSAYHERVNLALTRLLDPL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +  +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI+Y E TAI+AG+ 
Sbjct: 57  EMLKADPASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P   +    R  ++  L    G+ GM GGQ LD+  E   ID  Q+  
Sbjct: 117 LQTLAFSILADQPMPGVSAEARITMISELAQASGVAGMCGGQALDLAAEGQSIDLAQLEQ 176

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A   GA+ A    +     L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 IHRHKTGALIRAAVRLGALAAGEQGRAALPVLDVYANAIGLAFQVQDDILDVVGDTA 233


>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
          Length = 318

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 89/237 (37%), Positives = 126/237 (53%), Gaps = 7/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L+E  K+I+  +D  L  T   +       L  ++RY AL GGK++R  LV   +
Sbjct: 23  EFTQHLRELQKQIEMAMDTALSAT-PDVTRFVPPSLFESMRYSALGGGKRLRPVLVLLAS 81

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                + L A+    A+E IHCYSLIHDDLP+MD+  +RRG+PT HI Y E TAI+AG+G
Sbjct: 82  EACGADPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGEATAILAGDG 141

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           LLT AFE++++  +     +    +  L    G  GM+GGQ  D+  E        ++  
Sbjct: 142 LLTRAFEVLATEISN--KELALACVADLASAAGWCGMVGGQAADLAAETTPVTTLAELEQ 199

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTG L+  A   G  +  AS  + E L  +G  +G+ FQ+ADDLLD E    K
Sbjct: 200 IHHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLLDVEGSSEK 256


>gi|149377246|ref|ZP_01894993.1| geranyltranstransferase [Marinobacter algicola DG893]
 gi|149358434|gb|EDM46909.1| geranyltranstransferase [Marinobacter algicola DG893]
          Length = 299

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 133/236 (56%), Gaps = 10/236 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
           N  L + L++   +ID  L+  L         Q ++RL  A+RY++LGG K+IR  L   
Sbjct: 5   NTRLAAFLEQCRNQIDAELERQLC-----ASGQGSERLQQAMRYSVLGGGKRIRPALCLA 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A+       +A+    ++E IH YSLIHDDLP+MDN  +RRG+ T HI +DE TAI+AG
Sbjct: 60  AATALGQPRESAIVPACSLELIHAYSLIHDDLPAMDNDDLRRGRATTHIAFDEATAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L T AF  ++     + D +R  ++  L    G QGM GGQ +D++   + +   Q+ 
Sbjct: 120 DALQTLAFGWLAEA-PGVDDQVRLAMIRELATASGHQGMAGGQAIDLESVGKQLTVEQLE 178

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + + KTGAL+  +   GA+ A   ++++   L  + + LG+ FQ+ DDLLD E D
Sbjct: 179 NMHRHKTGALIAASVRMGALTATDVNEDQLAALTVYSQTLGLAFQVQDDLLDIEGD 234


>gi|225677225|ref|ZP_03788218.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590749|gb|EEH11983.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 263

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 9/212 (4%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10  LIVEVNRLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP MDN   RR + + H ++DE TA++AG+ LLT AFE++SS      + 
Sbjct: 70  VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSL-----NE 124

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            R +++  L+  IG++GM+GGQ LDI     D  ++  I  MKT  L   +CE GAI+ +
Sbjct: 125 KRCEIIKVLSQAIGIRGMVGGQALDI---GADFNKIKEIHLMKTAKLFAASCEIGAIIGN 181

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A   +++ L  +G NLG+IFQ  DD+ D E+D
Sbjct: 182 AIDKQRKALYNYGINLGLIFQAKDDIEDYEQD 213


>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
          Length = 296

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 92/235 (39%), Positives = 135/235 (57%), Gaps = 10/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            +   L    + ++  LD LL      +        + A+RY+LL GGK+IR  L    A
Sbjct: 2   DIKQYLNHRCQEVEQALDQLLPPIEGPLAGH-----VEAMRYSLLAGGKRIRPILCLAAA 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    L V AA+ECIH YSLIHDDLP+MD+  +RRG PT H ++ E  AI+AG+G
Sbjct: 57  EALPTDSRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDG 116

Query: 123 LLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LL++AFE+++ P     +    +  L+ ++   IG  GM+GGQ+LDI+ E   I+  Q+ 
Sbjct: 117 LLSFAFELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQ 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I + KTGAL+  A +SGAI   A + + E L  +GE +G+ FQ+ DDLL+   D
Sbjct: 177 QIHRCKTGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGD 231


>gi|256114345|ref|ZP_05455078.1| Polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265995644|ref|ZP_06108201.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262766928|gb|EEZ12546.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 304

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + L   +  ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A
Sbjct: 7   DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF       LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ 
Sbjct: 67  ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLTYAF+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241


>gi|94676522|ref|YP_588724.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94219672|gb|ABF13831.1| geranyltranstransferase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 304

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 94/234 (40%), Positives = 135/234 (57%), Gaps = 9/234 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L SKLQ++S  I+ +L+  L   +S      N  L++A+R AL GGK++R FL+ +   
Sbjct: 10  DLISKLQKSSNYIEIVLEQHLCTLSSK-----NKILVTAMRSALTGGKRLRPFLIYQTGK 64

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF +   +     AAIECIH YSLIHDDLP+MDN  +RRGKPT HIQ+ E  AI+AG+ L
Sbjct: 65  LFGIKKHSLNAAAAAIECIHAYSLIHDDLPAMDNHKLRRGKPTCHIQFGEKIAILAGDAL 124

Query: 124 LTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            T AF I+++ +   +   +R +++  L +  G  GM  GQ L+++ +F  +    V  I
Sbjct: 125 HTLAFTILANAQMPAIPIKVRLKMIEILANASGANGMCLGQALELESQFKKMSAKAVETI 184

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTGAL+  A   GAI A   S+     L  +   +G+ FQ+ DDL D  ED
Sbjct: 185 YSYKTGALIRAAVHIGAIAAGNKSKLAINYLDRYATAIGLAFQVQDDLWDISED 238


>gi|39996864|ref|NP_952815.1| geranyltranstransferase [Geobacter sulfurreducens PCA]
 gi|39983752|gb|AAR35142.1| geranyltranstransferase [Geobacter sulfurreducens PCA]
 gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
           KN400]
          Length = 297

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 129/235 (54%), Gaps = 11/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   L+E    +D  L+  L       + +    +  A+RY++  GGK++R  L+    
Sbjct: 2   DLKGYLKERCALVDEALERHLP-----AEDELPSSVHRAMRYSVFAGGKRVRPILMLAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   AL    A+E IH YSLIHDDLP+MD+   RRG+PT H  + E  AI+AG+ 
Sbjct: 57  DAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDA 116

Query: 123 LLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           LLT AF +ISSP     +  +    ++  +    G +GM+GGQ++D++ E    ID   V
Sbjct: 117 LLTEAFILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTGAL+  + ++GA++  A+ +  + +  +GE +G+ FQ+ADD+LD E 
Sbjct: 177 QYIHTRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEG 231


>gi|312137122|ref|YP_004004459.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Methanothermus fervidus DSM 2088]
 gi|311224841|gb|ADP77697.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Methanothermus fervidus DSM 2088]
          Length = 322

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 15/232 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
            L++ SK I+  +   +         + +  L+ A      GGK+IR  LV         
Sbjct: 3   YLEKYSKLIEEEIRKNISDIEPTELYKSSAHLIEA------GGKRIRPSLVLLSTESVGG 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL    AIE IH +SLIHDD+  MD   +RRG+ TVH+ + E  AI+AG+ L + A
Sbjct: 57  KIEDALNAATAIELIHTFSLIHDDI--MDKDEVRRGRATVHVIWGEPLAILAGDVLFSKA 114

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184
           FE++       K  ++   +++         +  GQ  D+  E    + E +   +   K
Sbjct: 115 FEVMLKSNIDEKRLVKVLDVMTKA----CVNLCKGQAYDMLFEKNFEVKEKEYLEMIYYK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T +L+  + + GAI+ + S+ E   L  +G+ LG+ FQ+ DD LD   D  +
Sbjct: 171 TASLIAASTKIGAIIGNGSKEEINALYNYGKFLGLAFQIHDDYLDIAGDEKQ 222


>gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
 gi|149753830|gb|EDM63761.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
          Length = 300

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 12/239 (5%)

Query: 1   MNG--GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFL 57
           MN       +++     I+ IL + L +   + +      ++ A+ Y+L+ GGK++R  L
Sbjct: 1   MNSKEEFTVQMKRKVAEIEEILKEYLPKPEGYQKV-----IMEAMEYSLMAGGKRLRPML 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           + E + LF           AA+E IH YSL+HDDLP+MDN   RRG+ T HI Y E   I
Sbjct: 56  MRETSRLFGDETEALCPFMAALEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGI 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQD--EFID 173
           +AG+ LL YAFE                 + +  L    G+ GM+GGQ++D+++    + 
Sbjct: 116 LAGDALLNYAFETAFRAFETAPQESLKIGRALSVLGRKAGVYGMIGGQVIDVKETGHAVP 175

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +  I ++KTGAL+  A   GAI+  A + +  ++      +GI FQ+ DD+LD   
Sbjct: 176 KDVLDTIYELKTGALIECAMMIGAILGGAEEEDVRKVEKIAHYVGIAFQIQDDILDVTS 234


>gi|322514115|ref|ZP_08067184.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
 gi|322120026|gb|EFX92005.1| geranyltranstransferase [Actinobacillus ureae ATCC 25976]
          Length = 297

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 11/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L + L    +RI+  L      T       +   L+ A+ YA LLGGK++R FL+ 
Sbjct: 1   MSYSLSTDLTAIQQRINDFLA-----TKLQAHQAYGSPLIDAMSYAVLLGGKRVRPFLIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V+        AA+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+A
Sbjct: 56  ATGRMLGVSLEQLDHSAAAMEAIHAYSLVHDDLPAMDDDKLRRGKPTCHIAFDETTAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L ++AFE+I+  ++ L D+ +   + +L    G +GM  GQ LD   +D+ ++  ++
Sbjct: 116 GDALQSFAFELIAQDES-LTDSQKVWQIQALAQAAGARGMCLGQSLDLLAEDKAVNLAEL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQN--EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +I + KTGAL+  +   G   +  SQN   K+ L  + + +G+ FQ+ DD+LD   +  
Sbjct: 175 ELIHRNKTGALIVASVLMGFNSSAHSQNLAVKQPLERYAQAIGLAFQVQDDILDVIGETD 234

Query: 236 K 236
           K
Sbjct: 235 K 235


>gi|295093395|emb|CBK82486.1| Geranylgeranyl pyrophosphate synthase [Coprococcus sp. ART55/1]
          Length = 294

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/231 (33%), Positives = 124/231 (53%), Gaps = 9/231 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + E + RI+ I++  L       +T     +  A+ Y++  GGK++R  L+ E   LF  
Sbjct: 6   IAEKAARINDIVESYLPPADGFNRT-----VCEAMAYSVEAGGKRLRPMLMEETYRLFGG 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AAIE IH YSLIHDDLP++DN   RRG+ T H+ + E  AI+AG+ LL YA
Sbjct: 61  KSEVIKPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRKTSHVVFGEAMAILAGDALLNYA 120

Query: 128 FEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           +E         +D +  +  M  L    G+ GM+GGQ++D++   + + + Q+  + + K
Sbjct: 121 YETACKAFGMGEDIHAVASAMCVLAQKPGINGMIGGQVVDVEMTGKELSKEQLEYVYENK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           TGAL+  +   GAI+A A + +   +     ++G+ FQ+ DD+LD   D  
Sbjct: 181 TGALIEASMMIGAILAGADEAKVAAVHKIASDVGMAFQIQDDILDVCGDSA 231


>gi|186510058|ref|NP_188073.2| GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3);
           farnesyltranstransferase [Arabidopsis thaliana]
 gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
          Length = 360

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   ++ ++  LD         +  +    +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L    R  + ++ L   IG  G++ GQM+D+  E ++       
Sbjct: 177 ALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            +  I   KT AL+  A   G IM   ++ E E+LR +   +G++FQ+ DD+LD     E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296

Query: 233 DLPK 236
           +L K
Sbjct: 297 ELGK 300


>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
 gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
          Length = 297

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 131/233 (56%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+    
Sbjct: 5   AFDAFLKESKTFVEENLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+G
Sbjct: 59  QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF+ I++  + ++    + +L+L L    G +GM+ GQ+ D++ E   +   ++  
Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 231


>gi|163845354|ref|YP_001623009.1| hypothetical protein BSUIS_B1253 [Brucella suis ATCC 23445]
 gi|163676077|gb|ABY40187.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 304

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + L   +  ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A
Sbjct: 7   DFTTLLNRRAMEVEAALAGLLDECPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF       LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ 
Sbjct: 67  ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLTYAF+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241


>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
 gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
          Length = 296

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 133/236 (56%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L+E+   ++  L       +     Q  + L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTIAFDTFLKESKTFVEEKL------VSYANGLQCPNVLREAMAYSLEAGGKRLRPLLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F       +    A+E IH YSL+HDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  ATLQAFGKERNLGVGAACALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLTYAF+ I++  + ++    + +L+L L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKRLTIDE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I K K G L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 175 LEYIHKHKAGKLLEFAVLAGAILSDATEEQEEKLLTFAKYIGLAFQIRDDILDVEG 230


>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
 gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
          Length = 297

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 11/234 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               +  ++  ++++  L+  +   A          L  A+RY +L GGK++R  LV   
Sbjct: 4   DEFDTWSRDRLEQVEAALERWVPALA-------PAGLGDAMRYGVLDGGKRLRPLLVLSA 56

Query: 62  ASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A      +   ALR   ++E IH YSLIHDD+P MD+  +RRGKPTVH+++ +  A++AG
Sbjct: 57  AEAVGATDSEAALRAACSVELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAG 116

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + +   AFE+++     +   ++++L   L    G  GM GGQ +D+      +DE  + 
Sbjct: 117 DAMQALAFEVLTPEDDSVPLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSLS 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + + KTGAL+  +   GA    AS   ++ L  +G  LG+ FQ+ DD+LD  +
Sbjct: 177 DMHRRKTGALLQASVMMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQ 230


>gi|17986554|ref|NP_539188.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
 gi|62290646|ref|YP_222439.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
 gi|82700560|ref|YP_415134.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
 gi|225628336|ref|ZP_03786370.1| geranyltranstransferase [Brucella ceti str. Cudo]
 gi|225853224|ref|YP_002733457.1| polyprenyl synthetase [Brucella melitensis ATCC 23457]
 gi|237816147|ref|ZP_04595142.1| geranyltranstransferase [Brucella abortus str. 2308 A]
 gi|254689934|ref|ZP_05153188.1| geranyltranstransferase [Brucella abortus bv. 6 str. 870]
 gi|254694426|ref|ZP_05156254.1| geranyltranstransferase [Brucella abortus bv. 3 str. Tulya]
 gi|254698085|ref|ZP_05159913.1| geranyltranstransferase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254708366|ref|ZP_05170194.1| geranyltranstransferase [Brucella pinnipedialis M163/99/10]
 gi|254708781|ref|ZP_05170592.1| geranyltranstransferase [Brucella pinnipedialis B2/94]
 gi|254714624|ref|ZP_05176435.1| geranyltranstransferase [Brucella ceti M644/93/1]
 gi|254717522|ref|ZP_05179333.1| geranyltranstransferase [Brucella ceti M13/05/1]
 gi|254730969|ref|ZP_05189547.1| geranyltranstransferase [Brucella abortus bv. 4 str. 292]
 gi|256030307|ref|ZP_05443921.1| geranyltranstransferase [Brucella pinnipedialis M292/94/1]
 gi|256045376|ref|ZP_05448270.1| geranyltranstransferase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061806|ref|ZP_05451941.1| geranyltranstransferase [Brucella neotomae 5K33]
 gi|256160480|ref|ZP_05458169.1| geranyltranstransferase [Brucella ceti M490/95/1]
 gi|256255686|ref|ZP_05461222.1| geranyltranstransferase [Brucella ceti B1/94]
 gi|256258189|ref|ZP_05463725.1| geranyltranstransferase [Brucella abortus bv. 9 str. C68]
 gi|256263286|ref|ZP_05465818.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|256370183|ref|YP_003107694.1| geranyltranstransferase [Brucella microti CCM 4915]
 gi|260167981|ref|ZP_05754792.1| geranyltranstransferase [Brucella sp. F5/99]
 gi|260547118|ref|ZP_05822856.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
 gi|260565731|ref|ZP_05836214.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260755469|ref|ZP_05867817.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
 gi|260758692|ref|ZP_05871040.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
 gi|260762526|ref|ZP_05874863.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884489|ref|ZP_05896103.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
 gi|261214740|ref|ZP_05929021.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261219357|ref|ZP_05933638.1| polyprenyl synthetase [Brucella ceti M13/05/1]
 gi|261222894|ref|ZP_05937175.1| polyprenyl synthetase [Brucella ceti B1/94]
 gi|261315865|ref|ZP_05955062.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
 gi|261316274|ref|ZP_05955471.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
 gi|261322419|ref|ZP_05961616.1| polyprenyl synthetase [Brucella ceti M644/93/1]
 gi|261325809|ref|ZP_05965006.1| polyprenyl synthetase [Brucella neotomae 5K33]
 gi|261757424|ref|ZP_06001133.1| polyprenyl synthetase [Brucella sp. F5/99]
 gi|265987340|ref|ZP_06099897.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
 gi|265991805|ref|ZP_06104362.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265998853|ref|ZP_06111410.1| polyprenyl synthetase [Brucella ceti M490/95/1]
 gi|294851019|ref|ZP_06791695.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
 gi|297249039|ref|ZP_06932747.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
 gi|17982161|gb|AAL51452.1| geranyltranstransferase [Brucella melitensis bv. 1 str. 16M]
 gi|62196778|gb|AAX75078.1| IspA, geranyltranstransferase [Brucella abortus bv. 1 str. 9-941]
 gi|82616661|emb|CAJ11743.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
 gi|225616182|gb|EEH13230.1| geranyltranstransferase [Brucella ceti str. Cudo]
 gi|225641589|gb|ACO01503.1| Polyprenyl synthetase [Brucella melitensis ATCC 23457]
 gi|237788609|gb|EEP62822.1| geranyltranstransferase [Brucella abortus str. 2308 A]
 gi|256000346|gb|ACU48745.1| geranyltranstransferase [Brucella microti CCM 4915]
 gi|260095483|gb|EEW79361.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
 gi|260151104|gb|EEW86199.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260669010|gb|EEX55950.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672952|gb|EEX59773.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675577|gb|EEX62398.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
 gi|260874017|gb|EEX81086.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
 gi|260916347|gb|EEX83208.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260921478|gb|EEX88131.1| polyprenyl synthetase [Brucella ceti B1/94]
 gi|260924446|gb|EEX91014.1| polyprenyl synthetase [Brucella ceti M13/05/1]
 gi|261295109|gb|EEX98605.1| polyprenyl synthetase [Brucella ceti M644/93/1]
 gi|261295497|gb|EEX98993.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
 gi|261301789|gb|EEY05286.1| polyprenyl synthetase [Brucella neotomae 5K33]
 gi|261304891|gb|EEY08388.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737408|gb|EEY25404.1| polyprenyl synthetase [Brucella sp. F5/99]
 gi|262553542|gb|EEZ09311.1| polyprenyl synthetase [Brucella ceti M490/95/1]
 gi|263002761|gb|EEZ15164.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093252|gb|EEZ17349.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264659537|gb|EEZ29798.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
 gi|294821662|gb|EFG38658.1| geranyltranstransferase [Brucella sp. NVSL 07-0026]
 gi|297174172|gb|EFH33529.1| geranyltranstransferase [Brucella abortus bv. 5 str. B3196]
 gi|326409783|gb|ADZ66848.1| polyprenyl synthetase [Brucella melitensis M28]
 gi|326539499|gb|ADZ87714.1| polyprenyl synthetase [Brucella melitensis M5-90]
          Length = 304

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + L   +  ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A
Sbjct: 7   DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF       LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ 
Sbjct: 67  ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLTYAF+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241


>gi|315022294|gb|EFT35322.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM]
          Length = 323

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 16/224 (7%)

Query: 22  DLLLQT-ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           DL+ +    H        L   + Y +  GGK++R  +V     LF  +   A++   AI
Sbjct: 9   DLVAEAIEKHQFKNEPKELYEPMNYIISHGGKRLRPIMVLMGCELFGGSLEKAMKPALAI 68

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H ++LIHDD+  MD   +RR KPT+H  +     I++G+ LL  A++        L+
Sbjct: 69  EFFHNFTLIHDDI--MDGAPLRRNKPTIHTLHGINVGILSGDALLIKAYQFF----EDLE 122

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESG 196
             +  + +   +    +  +  GQ +D+  E    +       +   KTG L   + + G
Sbjct: 123 PELFKKCITLFSETGAV--LCEGQQMDVNFETNSNVTYEDYIKMITYKTGVLSAASFKIG 180

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           A++A A++ E E L  FG+++GI FQ+ DD LD   +     KK
Sbjct: 181 AMIAGATEQEAEALYQFGKHIGIAFQIMDDYLDVFGNQEQFGKK 224


>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
 gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
 gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
 gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
          Length = 297

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 81/233 (34%), Positives = 132/233 (56%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+    
Sbjct: 5   AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+G
Sbjct: 59  QAFGKEKNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF++I + +  ++    + +L+L L    G +GM+ GQ+ D++ E   +   ++  
Sbjct: 119 LLTYAFQVIMTYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I K KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 179 IHKHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 231


>gi|148976608|ref|ZP_01813295.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium
           SWAT-3]
 gi|145963959|gb|EDK29217.1| Geranylgeranyl pyrophosphate synthase [Vibrionales bacterium
           SWAT-3]
          Length = 294

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 123/240 (51%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S    N+++++  LD L            N  L++A+RY  LLGGK+ R FLV 
Sbjct: 1   MIETLLSYQARNNEQLNLWLDRL---------PHQNQNLINAMRYGLLLGGKRARPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +A+ECIH YSLIHDDLP+MD+  +RRG  T HI++DE TAI+ 
Sbjct: 52  ITGEMLGCTAEELDTPASAVECIHAYSLIHDDLPAMDDDELRRGHQTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++           R +++  L    G QGM  GQ LDI+ E   +   +
Sbjct: 112 GDALQTLAFTILAEGTLSADGESNRVRMIQRLAEASGAQGMCIGQALDIEAENRAVTLKE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + + KTGALM  A   GA+ A         +L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEVHRNKTGALMKSAIRLGALAAGEKAFEVLPQLDKYADAIGLAFQVQDDILDIIGDTE 231


>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
 gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
          Length = 303

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 16/240 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               LQ   + ++ +LDDL+             RL  A+RYA+LGG K++R+ +V     
Sbjct: 8   FAEWLQGRVRHVEDVLDDLMPPAE-----VLPVRLHEAMRYAVLGGGKRVRAAMVYAAGQ 62

Query: 64  LFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
              V+        +  R  AA+E IH YSL+HDDLP MDN  +RRG+PT H+Q+DE TA+
Sbjct: 63  ACPVSGSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAM 122

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDET 175
           +AG+ L   AF++++S    +   +  Q   SL    G QGM GGQ +D       +   
Sbjct: 123 LAGDALQPLAFDLLAS--MPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRD 180

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++  +  MKTGA++  +   G I+A AS   ++ L  + + +G+ FQ+ DD+LD   D  
Sbjct: 181 ELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTA 240


>gi|330834019|ref|YP_004408747.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
 gi|329566158|gb|AEB94263.1| geranyltranstransferase [Metallosphaera cuprina Ar-4]
          Length = 327

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 115/236 (48%), Gaps = 16/236 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   L E   +++  +D  +              L  A RY L  GGK++R  +V   +
Sbjct: 2   ELEKYLGEVITQVNETIDKYIQGDV--------PELYEASRYLLKAGGKRLRPLMVVLSS 53

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +   A+  GAAIE +H ++LIHDD+  MD    RRG PTVH+++   TAI+AG+ 
Sbjct: 54  ELLGGSRDRAILAGAAIEVLHNFTLIHDDI--MDQDTTRRGLPTVHVKWGIPTAILAGDL 111

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           L   AFE+I+     L  ++  + +   + +I +  +  GQ +D++ E    + E     
Sbjct: 112 LHAKAFELITESIKGLPIDLAYRALNCFSRSIVI--VSEGQAMDMEFERRWDVTENLYLE 169

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + + KT  L   +   G ++A+ +  E   L  FGE +GI FQ+ DD+L    D  
Sbjct: 170 MIRKKTAQLFACSAHLGGLLANGTNEEVNSLYDFGEKIGIAFQIMDDILGITADEK 225


>gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565]
 gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565]
          Length = 296

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 117/223 (52%), Gaps = 6/223 (2%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
             +DD L      +      RL  A+ Y  LLGGK++R FLV     +  V         
Sbjct: 12  QRIDDCLSAQLESLPA-MAPRLRDAMSYGLLLGGKRVRPFLVYAVGEMLGVKSELLDGPA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+ECIH YSL+HDDLP+MDN  +RRG+PTVH  +DE TAI+AG+ L T AF I++    
Sbjct: 71  AAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPM 130

Query: 137 QLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193
                  R +++ +L    G  GM GGQ LD+Q E   I   ++  + + KTGAL+  A 
Sbjct: 131 PDSLMANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAV 190

Query: 194 ESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA+  A         L+ +   +G+ FQ+ DD+LD   D  
Sbjct: 191 ALGALCKADVDDATLAALQTYAAAIGLAFQVQDDILDITGDTA 233


>gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
 gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
          Length = 300

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 13/241 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M       ++   +R++   ++ L Q A         +L SA+RY+++GG K++R  LV 
Sbjct: 1   MTVAFKDWVKACQQRVEKAAENNLPQEALI-----PQKLHSAMRYSVIGGGKRVRPLLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +++ +         A+EC+H YSLIHDDLP MDN  +R GKPT H  + E  A++A
Sbjct: 56  AVGQIYDADPENLDLTALAVECVHSYSLIHDDLPCMDNDILRHGKPTTHAAFGEAVAMLA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQ 176
           G+ L   AF  +   +T+L    R +L+  L +    +GM GGQ +D+    ++ +   +
Sbjct: 116 GDALQPEAFLFLV--RTKLPAEQRIKLVELLAYASSTRGMCGGQAIDLSVVGNQKMTIEE 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           + ++  MKTGAL+  +   GA       SQ++  +L  +G  +G+ FQ+ DD+LD   D 
Sbjct: 174 LRLMHSMKTGALLKASVLLGAFAGKKTPSQHDLSQLEVYGNAIGLAFQIVDDILDVVGDT 233

Query: 235 P 235
            
Sbjct: 234 A 234


>gi|325958579|ref|YP_004290045.1| dimethylallyltranstransferase [Methanobacterium sp. AL-21]
 gi|325330011|gb|ADZ09073.1| Dimethylallyltranstransferase [Methanobacterium sp. AL-21]
          Length = 328

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 15/234 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L++ S  ID  + + L         +    L+ A      GGKKIR  +V   A      
Sbjct: 7   LKKYSSDIDEEIQNSLSTVDPEELKKSTQHLIKA------GGKKIRPSMVVLSAIAVGGA 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL+  AA+E IH +SLIHDD+  MD   +RRG+P+VH+ + E  AI+AG+ L + AF
Sbjct: 61  PEEALKTAAAVELIHTFSLIHDDI--MDEDDMRRGEPSVHVLWGEPMAILAGDTLFSKAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKT 185
           E +           R    L    +  ++ +  GQ  D+  E    + E     +   KT
Sbjct: 119 ETVLETPIDNVSYERVVGALKTVVDSCIK-ICEGQASDMCFEGNFEVSEEAYMNMIYKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GAL+  + +SGAI+   +  + E L  +G  +G+ FQ+ DD LD    E+DL K
Sbjct: 178 GALIAASTKSGAIIGGGTPEQVELLSEYGRLVGLAFQIQDDYLDVMSDEQDLGK 231


>gi|331091277|ref|ZP_08340118.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330404724|gb|EGG84263.1| hypothetical protein HMPREF9477_00761 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 296

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 10/228 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +     I+ IL   L  ++ H      ++++ A+ Y L+ GGK+IR  L+ E   +F   
Sbjct: 8   EAKVTEIENILRKYLPDSSGH-----QEKIMEAMEYNLMAGGKRIRPMLMKETYEMFGGT 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                   AAIE IH YSLIHDDLP+MDN   RRG+ T HI Y E   I+AG+ LL YAF
Sbjct: 63  GKIIEPFMAAIEMIHTYSLIHDDLPAMDNDDYRRGRKTTHIVYGEAMGILAGDALLNYAF 122

Query: 129 EIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMK 184
           E  S      +DN  +  + +  L    G+ GM+GGQ++D+    + +D+  +  I  +K
Sbjct: 123 ETASEAFDMDRDNGYLIGKALQILGRKAGIYGMIGGQVVDVAASGKAVDKDVLDFIYDLK 182

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           TGAL+  +   GAI+A A++ E + +    + +G+ FQ+ DD+LD   
Sbjct: 183 TGALIEASMMIGAILAGATEQEVKIIESAAKKVGLAFQIQDDILDVTS 230


>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
 gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
 gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
 gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
          Length = 297

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 131/233 (56%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+    
Sbjct: 5   AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+G
Sbjct: 59  QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF+ I++  + ++    + +L+L L    G +GM+ GQ+ D++ E   +   ++  
Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 231


>gi|148560740|ref|YP_001259620.1| geranyltranstransferase [Brucella ovis ATCC 25840]
 gi|148371997|gb|ABQ61976.1| geranyltranstransferase [Brucella ovis ATCC 25840]
          Length = 304

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 113/235 (48%), Positives = 153/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + L   +  ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A
Sbjct: 7   DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF       LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ 
Sbjct: 67  ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLTYAF+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241


>gi|261379616|ref|ZP_05984189.1| geranyltranstransferase [Neisseria subflava NJ9703]
 gi|284798098|gb|EFC53445.1| geranyltranstransferase [Neisseria subflava NJ9703]
          Length = 298

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
           MN    L +  Q+   + + +L   L       ++Q    L  A+RY  L GGK++R  L
Sbjct: 1   MNPANELKTWQQKAQAQTELLLAHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V   + L   N     +  AAIE +H YSL+HDD+P+MDN  +RRGKPT H+QYDE TA+
Sbjct: 56  VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           + G+ L T AF+++S P T L    +  ++ +L    G  GM GGQ +D+ +  + +++ 
Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           ++  +  +KTGAL+  A   GA+     +  + + L  +   LG+ FQ+ DD+LDCE D 
Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADT 234

Query: 235 P 235
            
Sbjct: 235 A 235


>gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
           15053]
 gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
           15053]
          Length = 300

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 82/227 (36%), Positives = 124/227 (54%), Gaps = 10/227 (4%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
              + I+T+L D L +     Q  +   ++ A+ Y+LL GGK++R  L+ E   LFN   
Sbjct: 13  RKVQEIETVLQDYLPR-----QKGYQSIIMEAMSYSLLAGGKRLRPMLMKETYDLFNGRS 67

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                  AAIE IH YSL+HDDLP+MDN   RRG+ T H+ Y E   I+AG+ LL YAFE
Sbjct: 68  KALKPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRRTTHVVYGEDMGILAGDALLNYAFE 127

Query: 130 IISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKT 185
                     ++  +  + +  L    G+ GM+GGQ++D+++   D  +  +  I ++KT
Sbjct: 128 TAFKAFVTEPEDSLLIGRALGVLGEKAGIYGMIGGQVIDVRETGRDISKEVLDTIYELKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            AL+  A   GAI+  AS+ E + +     N+GI FQ+ DD+LD   
Sbjct: 188 AALIESAMMIGAILGGASEEEVKAVEQIAGNVGIAFQIQDDILDVVS 234


>gi|319638772|ref|ZP_07993531.1| geranyltranstransferase [Neisseria mucosa C102]
 gi|317400013|gb|EFV80675.1| geranyltranstransferase [Neisseria mucosa C102]
          Length = 298

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
           MN    L +  Q+   + + +L   L       ++Q    L  A+RY  L GGK++R  L
Sbjct: 1   MNPANELKTWQQKAQAQTELLLAHFLP-----YESQVPHTLHEAMRYVTLGGGKRLRPLL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V   + L   N     +  AAIE +H YSL+HDD+P+MDN  +RRGKPT H+QYDE TA+
Sbjct: 56  VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           + G+ L T AF+++S P T L    +  ++ +L    G  GM GGQ +D+ +  + +++ 
Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           ++  +  +KTGAL+  A   GA+     +  + + L  +   LG+ FQ+ DD+LDCE D 
Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDRYAAKLGLAFQVIDDVLDCEADT 234

Query: 235 P 235
            
Sbjct: 235 A 235


>gi|299132868|ref|ZP_07026063.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
 gi|298593005|gb|EFI53205.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
          Length = 312

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 99/237 (41%), Positives = 141/237 (59%), Gaps = 5/237 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
                L   +   + +LD LL +     +     RL+ A+RY+ L GGK++R FL    A
Sbjct: 13  DFNKLLDATAADTEALLDRLLSERPEQGEILRPKRLIEAMRYSSLNGGKRLRPFLAVASA 72

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F+V    AL  GAA+ECIHCYSLIHDDLPSMDN  +RRG+PT H ++D+ TAI+AG+ 
Sbjct: 73  AMFDVPRQGALLAGAALECIHCYSLIHDDLPSMDNSDLRRGRPTSHKKFDDATAILAGDS 132

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVF 178
           LLT AF+II+  +      +R  L  +L    G+ GM GGQ++D+  E      +   V 
Sbjct: 133 LLTLAFDIITRDEVHRDPTVRLLLTRALARAAGIGGMAGGQIMDLAGEGRFGDKEPPDVA 192

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+ + C +GA++  AS+ +   L  +G   G  FQ+ADDLLD E D  
Sbjct: 193 KLQQMKTGALLKYGCIAGALLGQASKEQYAALDAYGHAFGEAFQIADDLLDVEGDAA 249


>gi|56964228|ref|YP_175959.1| geranyltranstransferase [Bacillus clausii KSM-K16]
 gi|56910471|dbj|BAD64998.1| geranyltranstransferase [Bacillus clausii KSM-K16]
          Length = 295

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 84/236 (35%), Positives = 136/236 (57%), Gaps = 9/236 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+    + L+E  + +D  L + + +  +        RL  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MSALFQTFLEEARQLVDKKLPEYVRELEAE------HRLKEAMLYSLEAGGKRVRPVLLL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                +N   L  L    AIE +H YSL+HDDLP+MD+  +RRG+PT H  + E TAI+A
Sbjct: 55  AVLEAYNQPILHGLDTACAIEMVHTYSLVHDDLPAMDDDDLRRGQPTNHKVFGEATAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT +F +I++    L    +  ++ +L+   G  GM+GGQ+ D+  E   +   Q+
Sbjct: 115 GDALLTQSFALIANADAPLSAKTKVSIIAALSKAAGASGMVGGQLADMFAEGKQLTVEQL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + K KTG L+ F+ E+GA++A  S  E+ +L  FG+ +G++FQ+ DD+LD E D
Sbjct: 175 ANVHKRKTGELLAFSIEAGALIAGVSNEERSKLNEFGQEIGLLFQIKDDILDVEGD 230


>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
 gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
          Length = 297

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 131/233 (56%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + L+E+   ++  L     +       Q  + L  A+ Y+L  GGK++R  L+    
Sbjct: 5   AFDAFLKESKTFVEEKLVSYANEL------QCPNVLREAMAYSLEAGGKRLRPLLLFATL 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+G
Sbjct: 59  QAFGKERNLGVGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118

Query: 123 LLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF+ I++  + ++    + +L+L L    G +GM+ GQ+ D++ E   +   ++  
Sbjct: 119 LLTYAFQVIMAYEQKEISAEKKVRLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KTG L+ FA  +GAI++ A++ ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 179 IHNHKTGKLLEFAVLAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEG 231


>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
          Length = 352

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/237 (30%), Positives = 125/237 (52%), Gaps = 11/237 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  L +   +    ++  LD+ L  T     T     ++ ++RY+LL GGK++R  +   
Sbjct: 55  DFDLKAYFAQKVAAVEKALDESLTCT-----TPETKIIVESMRYSLLAGGKRVRPVMCIA 109

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F      A+    AIE IH  SLIHDDLP+MDN  +RRG PT H+ Y +  AI+AG
Sbjct: 110 ACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAG 169

Query: 121 NGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET 175
           + LL+ +FE  +  S    +      + +  L   +G  G+ GGQ++D++ E    +   
Sbjct: 170 DALLSTSFEHCAVGSTAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLE 229

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++  I   KT  L+  +  +GA++A A++++  +   +  ++GI FQ+ADD+LD   
Sbjct: 230 ELTWIHTHKTAKLLEVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTA 286


>gi|320540321|ref|ZP_08039973.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
 gi|320029641|gb|EFW11668.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
          Length = 306

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 127/240 (52%), Gaps = 10/240 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           +     +L    +R D  L D +          ++  L++++R+ ALLGGK++R FLV  
Sbjct: 7   SAAFADQLLAFRQRTDRTLLDFIAPL-----PFNDGDLVASMRHGALLGGKRLRPFLVYT 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F +         AA+ECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG
Sbjct: 62  TGQMFGIAQNNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAG 121

Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           + L + AF I++  +   +    R  ++  L    G+ GM GGQ +D+  E   I    +
Sbjct: 122 DALQSLAFSILADAEMPDVALRDRLAMVSELAAASGVAGMCGGQSMDLDAEGKQIGLAAL 181

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I + KTGAL+  A   GA+ A +S       L  +   +G+ FQ+ DD+LD   +  K
Sbjct: 182 EQIHRHKTGALIRAAIRLGALAAGSSGRAALPLLDRYAAAIGLAFQVQDDILDVIGETEK 241


>gi|327392961|dbj|BAK10383.1| geranyltranstransferase IspA [Pantoea ananatis AJ13355]
          Length = 299

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P  L    ++++  L  LL           +  L++A++Y ALLGGK++R FLV    
Sbjct: 2   DFPELLDAYHRQVNRALTGLLDAL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            + + +  +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI+Y E TAI+AG+ 
Sbjct: 57  EMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P   +    R  ++  L    G+ GM GGQ LD+  E   +   Q+  
Sbjct: 117 LQTLAFSILADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQ 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA  A    +     L  + + +G+ FQ+ DD+LD   D   + 
Sbjct: 177 IHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|291616530|ref|YP_003519272.1| IspA [Pantoea ananatis LMG 20103]
 gi|291151560|gb|ADD76144.1| IspA [Pantoea ananatis LMG 20103]
          Length = 299

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P  L    ++++  L  LL           +  L++A++Y ALLGGK++R FLV    
Sbjct: 2   DFPELLDAYHRQVNRALTGLLDAL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            + + +  +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI+Y E TAI+AG+ 
Sbjct: 57  EMLHADKASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P   +    R  ++  L    G+ GM GGQ LD+  E   +   Q+  
Sbjct: 117 LQTLAFSILADQPMPGVSAEYRLAMLSELAKASGVAGMCGGQALDLAAEGQSVGLAQLEQ 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA  A    +     L  + + +G+ FQ+ DD+LD   D   + 
Sbjct: 177 IHRHKTGALIRAAVRLGAFAAGEKGREALPYLDRYADAIGLAFQVQDDILDVTGDTAVIG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
 gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
          Length = 307

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 10/234 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            + E   R+D+   +L          +  + L  ++ Y+L+ GGK++R  LV        
Sbjct: 16  YMNEICDRLDSEFTNLFPS-----GWKVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGG 70

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A+ V  A+E +H YSLIHDDLP+MD+   RRGKPT H  + E +AI+AG+ LLT+
Sbjct: 71  GSREAAVPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTH 130

Query: 127 AFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182
           AF   I ++ K  +       ++  L    G +GM+GGQ+ D++ E       Q+  I  
Sbjct: 131 AFYSVIQAARKHGVPAERVLSIVEDLAVYAGPRGMVGGQVADMEGEQGITTLEQLEYIHL 190

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KT  L+ F+  +G  +A  S ++ E LR FG ++G+ FQ+ DD+LD   D  K
Sbjct: 191 HKTSDLIMFSLMAGGHVAGCSDSQIESLRTFGHHIGLAFQIQDDILDLVGDESK 244


>gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
 gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
          Length = 295

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 13/237 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           MN  +     E    +D  L+ L+    SH+ +     L  A+ Y  LLGGK+IR +L  
Sbjct: 1   MN--IKQFTAEVRSAVDNRLNQLI---ESHIASSS---LKEAMAYGVLLGGKRIRPYLTM 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L       AL    A+E IH YSLIHDDLP+MD+  +RRG PT HI++ E TA++A
Sbjct: 53  AVAELCGAETNDALDAACAVELIHAYSLIHDDLPAMDDDELRRGHPTCHIKFGEATAVLA 112

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
           G+ L T AFE++S+  +T+L    R  ++  L    G +GM  GQ   LD     IDE +
Sbjct: 113 GDALQTLAFEVLSTNLETKLSSQRRIAMIQHLASASGAKGMCFGQALDLDATGRAIDELE 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I + KTGAL+  +   G +  +  SQ   +    F   +G+ +Q+ DD+LD   
Sbjct: 173 LEKIHRHKTGALIRASAALGVLAGNDESQQYLDHFCDFASWIGLAYQVYDDILDVVG 229


>gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 298

 Score =  215 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 12/241 (4%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
           MN    L    Q+   + + +L+  L       + Q    L  A+RY  L GGK++R  L
Sbjct: 1   MNPANELKVWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V   + L + +     +  AAIE +H YSL+HDD+P+MDN  +RRGKPT H++YDE TA+
Sbjct: 56  VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           + G+ L T AF+++S P T L    +  ++ +L    G  GM GGQ +D+ +  + +++ 
Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           Q+  +  +KTGAL+  A   GA+       ++   L  +   LG+ FQ+ DD+LDCE D 
Sbjct: 175 QLEQMHSLKTGALIRAAAVLGALACPDLDSDDVRTLDNYAAKLGLAFQVIDDVLDCEADT 234

Query: 235 P 235
            
Sbjct: 235 A 235


>gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
 gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
          Length = 296

 Score =  215 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 10/222 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+ IL   L      ++      ++ A+ Y+LL GGK++R  L+ E   LF  +      
Sbjct: 14  IEQILKKYLP-----VKEGLQKEIMEAMEYSLLAGGKRLRPMLMRETYVLFGGDEELIEP 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             AAIE IH YSL+HDDLP+MDN   RRG+ T H+ Y E   I+AG+ LL +AFE     
Sbjct: 69  FMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEAMGILAGDALLNFAFETAVKA 128

Query: 135 KTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
                       Q M  L+   G+ GM+GGQ++D++   + + +  +  I ++KT AL+ 
Sbjct: 129 FAMCPQKSIEIGQAMRILSEKAGIYGMIGGQVVDVKSAGQAVSKEVLDFIYELKTSALIE 188

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A   GA++A AS+ E +++    + +G+ FQ+ DD+LD   
Sbjct: 189 CAMMIGAVLAGASETEVQKIEQIAKYVGVAFQIQDDILDVTS 230


>gi|194366666|ref|YP_002029276.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 292

 Score =  215 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 84/230 (36%), Positives = 122/230 (53%), Gaps = 10/230 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
            +       RI++ LD  L   A     +   RL  A+RY++LGG K++R  LV     L
Sbjct: 4   EALFARWRDRIESQLDAALPSPA-----EAPQRLHQAMRYSVLGGGKRMRPLLVYASGQL 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F     +      A+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+AG+ L 
Sbjct: 59  FGAQPESLDAAAMAVELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQ 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQK 182
           T AF +++     L   +R   + +L H  G  GM GGQ   +D   +      +  +  
Sbjct: 119 TRAFGLLADA--PLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHA 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTGAL+  A   GA+   A + +  +L  F + LG+ FQ+ DD+LD E 
Sbjct: 177 LKTGALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEA 226


>gi|326800486|ref|YP_004318305.1| geranyltranstransferase [Sphingobacterium sp. 21]
 gi|326551250|gb|ADZ79635.1| Geranyltranstransferase [Sphingobacterium sp. 21]
          Length = 324

 Score =  215 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 15/227 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
             + TI+ + L +        + + L   I+Y L  GGK++R  L    A LF       
Sbjct: 5   AALQTIIGEALTERNF---PDNPNTLYEPIKYFLAIGGKRLRPVLTLLAAELFGATIKEG 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    AIE  H ++L+HDD+  MD   +RRG+ T+H ++D  TAI++G+  L  A+++++
Sbjct: 62  LPAALAIEMFHNFTLMHDDI--MDEAPLRRGRETIHKKWDINTAILSGDATLIRAYQLLA 119

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALM 189
             K +L   +          N   Q +  GQ LD+  E    + E +   + ++KT  L+
Sbjct: 120 ECKPELLAELL------KVFNKMAQEVCEGQQLDMDFEKLATVTEEEYLHMIRLKTSVLL 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A E GAI+  A + ++  L  FG N+GI FQL DD+LD   D  K
Sbjct: 174 GAALEIGAILGGADKQDRSNLYTFGVNIGIAFQLQDDILDVYGDPSK 220


>gi|237756447|ref|ZP_04584985.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691395|gb|EEP60465.1| geranyltranstransferase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 287

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 92/236 (38%), Positives = 134/236 (56%), Gaps = 14/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
                L+E +  I+  LD  +            + L +A+RY+L  GGK+IR  LV E A
Sbjct: 2   EFKDILKEKASFINKQLDRFVPNCI-------PEELSNAMRYSLEAGGKRIRPILVIESA 54

Query: 63  SLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                +VN    + +  + E IH YSLIHDDLP+MD+  +RRGKPT H  + E  AI+AG
Sbjct: 55  KAVKEDVNVEDFIDIAISTEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAG 114

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +GLLTYAFE+IS+   +L      +++  L+HN+G+ GM+GGQ  DI   F D   V  I
Sbjct: 115 DGLLTYAFEVISN-NKKLSAEKIVKVINILSHNVGIYGMVGGQAADILPNFKD---VEFI 170

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KT   +   C+ G ++A A++ E  +L+ +G N+G+ FQ+ DD+LD   D  K
Sbjct: 171 HLNKTAKFLSACCQIGGVLADATEEEILKLKNYGINIGLAFQIWDDILDEIGDEEK 226


>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
 gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
          Length = 304

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 80/234 (34%), Positives = 124/234 (52%), Gaps = 10/234 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            + E   R+D+   +L          +  + L  ++ Y+L+ GGK++R  LV        
Sbjct: 13  YMNEICDRLDSEFTNLFPS-----GWKVPETLSRSMSYSLMAGGKRMRPLLVIAACEAGG 67

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A+ V  A+E +H YSLIHDDLP+MD+   RRGKPT H  + E +AI+AG+ LLT+
Sbjct: 68  GSREAAVPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTH 127

Query: 127 AFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQK 182
           AF   I ++ K  +       ++  L    G +GM+GGQ+ D++ E       Q+  I  
Sbjct: 128 AFYSVIQAARKHGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGITTLEQLEYIHL 187

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KT  L+ F+  +G  +A  S  + E LR FG ++G+ FQ+ DD+LD   D  K
Sbjct: 188 HKTSDLIMFSLMAGGHVAGCSDAQIESLRTFGHHIGLAFQIQDDILDLVGDESK 241


>gi|238917015|ref|YP_002930532.1| geranyltranstransferase [Eubacterium eligens ATCC 27750]
 gi|238872375|gb|ACR72085.1| geranyltranstransferase [Eubacterium eligens ATCC 27750]
          Length = 297

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 78/243 (32%), Positives = 131/243 (53%), Gaps = 14/243 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
               ++L++    I+ I+   L +     +T  + ++  ++ Y++  GGK++R  L+ E 
Sbjct: 2   SDFKNELEQEVVFINDIILRYLPE-----ETGLDKKIRESMNYSVNAGGKRVRPMLMLEV 56

Query: 62  ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             L   N         AA+ECIH YSL+HDDLP+MDN   RRG+ T H  + E   I+AG
Sbjct: 57  YKLCGGNDCQVVYPFMAALECIHSYSLVHDDLPAMDNDDYRRGRLTTHKVFGEDFGILAG 116

Query: 121 NGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           +GLL  A+EI++      + +I  +++ M  +    G++GM+GGQ +D++     + E Q
Sbjct: 117 DGLLNLAYEIMAEALVSGEGDIETKAKAMEVIARKAGIKGMVGGQAVDVELTGRTLSEEQ 176

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I ++KTGAL+  A  +GA +A       ++L      +G  FQ+ DD+LD     E+
Sbjct: 177 LDFIFRLKTGALIEAAFLAGAYLAGCDDETADKLCRAASLIGFAFQIRDDILDVTSSLEE 236

Query: 234 LPK 236
           L K
Sbjct: 237 LGK 239


>gi|114563954|ref|YP_751468.1| polyprenyl synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114335247|gb|ABI72629.1| farnesyl-diphosphate synthase [Shewanella frigidimarina NCIMB 400]
          Length = 293

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 130/238 (54%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   +     R++ IL+  L      +       L +A+ + ALLGGK+IR FLV     
Sbjct: 2   LAEAITTYQNRVNGILNQHLT-----LLDDAAPDLKAAMLHGALLGGKRIRPFLVYSVGD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +  VN     +  AAIECIH YSLIHDDLP+MDN  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MLGVNINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AFEII++P   L    +  ++  L    G QGM GGQ +D+   D  I+  ++  + 
Sbjct: 117 QTLAFEIITAPCNDLHPKQQLAMVRVLAKASGYQGMCGGQAIDLSATDHSINLDRLTELH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             KTGAL+  A E   I A       + +  +   LG+ FQ+ DD+LD     E+L K
Sbjct: 177 NKKTGALISCAVELALIAADVPDEHYKLMMKYAHTLGLAFQVQDDILDITASTEELGK 234


>gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
 gi|225208394|gb|EEG90748.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
          Length = 300

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 129/240 (53%), Gaps = 13/240 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
              +++E ++ I+ +L   L +        +  +++ A+ Y+++ GGK++R  L+ E   
Sbjct: 7   FKEEMKERTEVIEKLLVKYLPKAEG-----YQSQIMEAMEYSVMAGGKRLRPMLMQETYR 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF           AA+E IH YSL+HDDLP+MDN   RRG+ T HI Y E   I+AG+ L
Sbjct: 62  LFGGEGKEIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEAMGILAGDAL 121

Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
           L YAFE          +   +  + +  L    G+ GM+GGQ++D+      +DE  +  
Sbjct: 122 LNYAFETAVKAFEIAPEKSLLIGKALKILAEKAGIYGMIGGQVVDVASCGVGLDEGMLNF 181

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           I ++KTGAL+  +   GA++A A   E E+++     +GI FQ+ DD+LD     E+L K
Sbjct: 182 IYELKTGALIESSMMIGALLAGAEDAELEKVQKIASGVGIAFQIQDDILDVTSTTEELGK 241


>gi|266620367|ref|ZP_06113302.1| geranyltranstransferase [Clostridium hathewayi DSM 13479]
 gi|288868039|gb|EFD00338.1| geranyltranstransferase [Clostridium hathewayi DSM 13479]
          Length = 295

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 74/236 (31%), Positives = 123/236 (52%), Gaps = 11/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN      L+  ++ ++ +++  L     + +T     +L A+ Y++  GGK++R  L+ 
Sbjct: 1   MN--FNEMLETRTREVEAVVERYLPAADGYQKT-----VLDAMNYSVRAGGKRLRPMLME 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   LF  +        AAIE IH  SLIHDDLP MDN  +RRG PT  ++Y    A++A
Sbjct: 54  ETYRLFGGSGTVVEPFMAAIEMIHTSSLIHDDLPCMDNDELRRGLPTTWVKYGYDMAVLA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           G+ LL YA E  +      +D     + +  L    G+ GM+GGQ +D++  ++ +   +
Sbjct: 114 GDSLLIYAVETAAKAFALTEDAAVVGRCIGILAQKTGIYGMIGGQTVDVELTNKPVPHEK 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I  +KTGAL+  +   GA++A A + E   +      +G+ FQ+ DD+LD   
Sbjct: 174 LDFIYHLKTGALLESSMMIGALLAGADEEETRLVEQMAAAIGLAFQIQDDILDVTS 229


>gi|312112938|ref|YP_004010534.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218067|gb|ADP69435.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 296

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 109/234 (46%), Positives = 147/234 (62%), Gaps = 6/234 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
              +L++++ R++  LD+ L   ++       DRLL A+RY  L GGK+ R FLV E A+
Sbjct: 3   FTERLEDHASRVERHLDEWL---STDKLGAVPDRLLDAMRYGTLGGGKRFRPFLVIESAA 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF V    AL  G+A+ECIHCYSL+HDDLP+MDN  +RRG+PTVH  +D+ TAI+AG+ L
Sbjct: 60  LFGVPVEKALNAGSALECIHCYSLVHDDLPAMDNDDLRRGRPTVHKAFDDATAILAGDTL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT AFEII+   T     +R+ L L L    G  GM GGQMLD+      + E  +  +Q
Sbjct: 120 LTVAFEIIAHESTHPNPAVRAALGLELARASGGAGMAGGQMLDLMAPGKMLGEADIRTLQ 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            MKTGAL+ + C +G I+  AS+ E   L+ +G+ LG  FQLADDLLD E D  
Sbjct: 180 AMKTGALITYGCVAGGILGEASKAELAALKTYGDALGAAFQLADDLLDAEGDAA 233


>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 345

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 7/219 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
           T++ ++  +    +  Q  +++  A+RY+ L  G K+    +      LF  N L A   
Sbjct: 60  TLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPT 119

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG+ L    +  I S  
Sbjct: 120 ACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHT 179

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           P   + +    +++  +   +G  GM  GQ LD++      + V   Q+ K G +   + 
Sbjct: 180 PTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEG---GPSFVEFAQEKKYGEMSECSA 236

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             G ++A A  +E +RLR +G  +G+++Q+ DD+L+ + 
Sbjct: 237 VCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKA 275


>gi|224543278|ref|ZP_03683817.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523811|gb|EEF92916.1| hypothetical protein CATMIT_02478 [Catenibacterium mitsuokai DSM
           15897]
          Length = 284

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 10/227 (4%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           + I++++  +    + +     +  A+ Y+++ GGK++R  L  +    ++V++   L +
Sbjct: 4   NNIIEEVNARLKEILSSYRPGLVKEAMTYSVMAGGKRLRPLLFIQTLRAYSVDYHKYLDI 63

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIE IH YSLIHDDLP MDN  +RRGKPT H Q+DE TAI+AG+ LL  +  +I   +
Sbjct: 64  ACAIEMIHTYSLIHDDLPGMDNDDLRRGKPTCHKQFDEATAILAGDALLNESMNVI--IR 121

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFAC 193
             L D ++ +++  L +  GL GM+ GQ  D+  E       ++  I   KTGAL+    
Sbjct: 122 MDLDDALKVEVLRYLYNASGLGGMIYGQQQDMYFETHTATLDELQAIHHDKTGALISVPM 181

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           +   ++A   + + ++L   G  LG+ FQ+ DD+LD     E L KK
Sbjct: 182 KIAGLIAK--KEDADKLENIGFKLGLAFQIQDDILDVTSTTETLGKK 226


>gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551]
 gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551]
          Length = 298

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 135/240 (56%), Gaps = 12/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   +     R++T L +++    + +       L  ++ Y+L  GGK++R  L+ 
Sbjct: 5   MN--LKEYISFTKDRVETRLPEVVKALHAPVN------LKESMLYSLTAGGKRLRPVLLF 56

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F  +    L    A+E IH YSLIHDDLPSMD+  +RRGKPT H  Y E TAI+A
Sbjct: 57  ATLHAFGKDESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILA 116

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLT +F++IS     ++  +++ QL+  L    G +GM+ GQ+ D++ E   +   +
Sbjct: 117 GDALLTNSFQLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDE 176

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I   KTG L+ F  ++GAI+A A+  ++E L  F +++G+ FQ+ DD+LD E    K
Sbjct: 177 LEYIHLHKTGKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEK 236


>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
 gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
          Length = 298

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 85/241 (35%), Positives = 140/241 (58%), Gaps = 15/241 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             L    +E++  I+ +++  + +  S      + RL  +++Y++  GGK+IR  L+   
Sbjct: 2   SALTEFTKEHAPLIEEVMERFVKEHTS------DQRLFKSMQYSIQAGGKRIRPLLLAAT 55

Query: 62  ASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + F+    TA+ +  AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG
Sbjct: 56  VAAFHKPVNTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAG 115

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           +GLLT AF++++    +++ N +  L+  L+   G QGM+ GQ  DIQ E   +   ++ 
Sbjct: 116 DGLLTAAFQLVAMA--EIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALSLEELM 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235
            I + KTG L+ FA  +G ++A  ++     L  F +++G+ FQ+ DDLLD     E+L 
Sbjct: 174 SIHERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELG 233

Query: 236 K 236
           K
Sbjct: 234 K 234


>gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
           DSM 15981]
 gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
           DSM 15981]
          Length = 303

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 74/245 (30%), Positives = 130/245 (53%), Gaps = 16/245 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
               ++++  +K I+ I++  L +     +T H   +L A+ Y++  GGK++R  L+ E 
Sbjct: 5   EQFKAEMERRTKEIEQIIEPYLPE-----ETGHQKTVLEAMNYSMKAGGKRLRPMLMQEV 59

Query: 62  ASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             LF  + L   +   AA+E IH  SL+HDDLP MD+  +RRGKP+   +Y E   ++ G
Sbjct: 60  CRLFTGDVLDCVIPFMAAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTG 119

Query: 121 NGLLTYAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDE 174
           + L+ YAFE  +       D    +   + +  L H  G  GM+GGQ +D++     I  
Sbjct: 120 DALMMYAFETAARAFETSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPR 179

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
            ++  I ++KTGAL+  +   GA++  A++ + + +     ++G+ FQ+ DD+LD     
Sbjct: 180 DKLDFIYRLKTGALLEASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDVTGSE 239

Query: 233 -DLPK 236
            +L K
Sbjct: 240 AELGK 244


>gi|170730756|ref|YP_001776189.1| geranyltranstransferase [Xylella fastidiosa M12]
 gi|167965549|gb|ACA12559.1| geranyltranstransferase [Xylella fastidiosa M12]
          Length = 291

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 13/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L ++     +R D+ L+  L      + TQ   RL +A+RY +L GGK+IR  LV 
Sbjct: 1   MSKALFTR---WCQRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF+V+        AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ 
Sbjct: 53  AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
           G+ L T AFE ++        ++R   + +LTH  G+ GM GGQ LDI      +T   +
Sbjct: 113 GDALQTLAFECLADA--PADASLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKAL 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  +K+G LM  A   GA+    S  +   L  F   LG+ FQ+ DD+LD E 
Sbjct: 171 EAMHALKSGTLMRAAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIES 225


>gi|209694502|ref|YP_002262430.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238]
 gi|208008453|emb|CAQ78619.1| geranyltranstransferase [Aliivibrio salmonicida LFI1238]
          Length = 298

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 89/244 (36%), Positives = 133/244 (54%), Gaps = 18/244 (7%)

Query: 1   MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
           M   L  +L    Q N + ++   + + +Q            L  A++YALL GGK+ R 
Sbjct: 1   MTDSLKQQLPIFQQRNIEHLNQWFEKIEIQQ---------QPLTDAMKYALLLGGKRARP 51

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           +LV   A++  ++   A    AA+ECIH YSLIHDDLP+MDN  +RRG  T HI++DE T
Sbjct: 52  YLVYITANMLGIDSEHADAPAAAVECIHSYSLIHDDLPAMDNDDLRRGHATCHIKFDEAT 111

Query: 116 AIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172
           AI+AG+ L T AFEI+++    +  ++ R  ++  L+   G  GM  GQ LD+Q E   +
Sbjct: 112 AILAGDALQTLAFEILANGTLAEEAESSRIDMIRVLSKASGASGMCMGQSLDLQAEGKQV 171

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCE 231
           D   +  I   KTGALM  A + GA+ A     +   +L  + + +G+ FQ+ DD+LD  
Sbjct: 172 DLLSLEQIHANKTGALMKSAIQLGALCAGEKGKQILPQLEKYADAIGLAFQVQDDILDIT 231

Query: 232 EDLP 235
            D  
Sbjct: 232 SDTE 235


>gi|225428131|ref|XP_002281076.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|225467464|ref|XP_002264102.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 341

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 14/232 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
           M   L S        I+T L++ +         ++  ++  A+RY++L  GGK+    + 
Sbjct: 46  MQFDLRSYWTTLISEINTKLEEAI-------PVKYPQQIYEAMRYSVLAKGGKRAPPVMC 98

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                LF  + L A     A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+
Sbjct: 99  VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 158

Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           AG+ L    F  I S  P   + +    +++  +  ++G  GM  GQ LD++        
Sbjct: 159 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNS 215

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           V  +Q+ K G +   +   G  +  A+ ++  RLR +G  +G+++Q+ DD+L
Sbjct: 216 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVL 267


>gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319]
 gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319]
          Length = 298

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 133/237 (56%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   +     R++T L +++    + +       L  ++ Y+L  GGK++R  L+    
Sbjct: 6   NLKEYISFTKDRVETRLPEVVKALHAPVN------LKESMLYSLTAGGKRLRPVLLFATL 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F  +    L    A+E IH YSLIHDDLPSMD+  +RRGKPT H  Y E TAI+AG+ 
Sbjct: 60  HAFGKDESMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDA 119

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLT +F++IS     ++  +++ QL+  L    G +GM+ GQ+ D++ E   +   ++  
Sbjct: 120 LLTNSFQLISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEY 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTG L+ F  ++GAI+A A+  ++E L  F +++G+ FQ+ DD+LD E    K
Sbjct: 180 IHLHKTGKLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEK 236


>gi|254719767|ref|ZP_05181578.1| Polyprenyl synthetase [Brucella sp. 83/13]
 gi|265984787|ref|ZP_06097522.1| polyprenyl synthetase [Brucella sp. 83/13]
 gi|264663379|gb|EEZ33640.1| polyprenyl synthetase [Brucella sp. 83/13]
          Length = 304

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 112/235 (47%), Positives = 154/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + L   +  ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A
Sbjct: 7   DFTTLLNRRAMEVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF  +    LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ 
Sbjct: 67  ALFGQHGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDS 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLTYAF+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A AS+ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 241


>gi|212636370|ref|YP_002312895.1| polyprenyl synthetase [Shewanella piezotolerans WP3]
 gi|212557854|gb|ACJ30308.1| Polyprenyl synthetase [Shewanella piezotolerans WP3]
          Length = 293

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 138/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   L    +RI+ +L   +           + +L +A+++ AL+GGK+IR FLV     
Sbjct: 2   LAESLVTYQQRINQLLATRIDALDDI-----DPKLKAAMKHGALIGGKRIRPFLVYAIGE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + NV   T     AAIEC+H YSLIHDDLP+MD+  +RRG+PTVHI YDE TAI+AG+ L
Sbjct: 57  MLNVKLETLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAYDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
              AFEIIS P   +  +    ++ +L +  G  GM GGQ +D+   D+ I+   +  + 
Sbjct: 117 QALAFEIISEPIKNIAPSQNLAMVKALANASGYSGMCGGQAMDLSATDKQIELATLIQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           K+KTGAL+  A E   I A  + +E++ L  F + +G+ FQ+ DD+LD     E+L K
Sbjct: 177 KLKTGALIRCAVEFAIIAAKINDDERQALVDFADAIGLAFQVQDDVLDIIASTEELGK 234


>gi|254700427|ref|ZP_05162255.1| geranyltranstransferase [Brucella suis bv. 5 str. 513]
 gi|261750926|ref|ZP_05994635.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
 gi|261740679|gb|EEY28605.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
          Length = 304

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 112/235 (47%), Positives = 153/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + L   +  ++  L  L+ +     +     RL++A+R+  L GGK++R FLV E A
Sbjct: 7   DFTTLLNRRAMEVEAALAGLMDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF       LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ 
Sbjct: 67  ALFGQYGQAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDS 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLTYAF+II+S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +
Sbjct: 127 LLTYAFDIIASDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITL 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 187 QAMKTGALIRFACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 241


>gi|228476147|ref|ZP_04060855.1| geranyltranstransferase [Staphylococcus hominis SK119]
 gi|228269970|gb|EEK11450.1| geranyltranstransferase [Staphylococcus hominis SK119]
          Length = 296

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 94/239 (39%), Positives = 136/239 (56%), Gaps = 10/239 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L   + E  + I+  LD ++        +  N +L  +++Y+L  GGK+IR  LV 
Sbjct: 1   MKMMLKKSMNELIEIINNNLDGIIK------SSPLNTKLEESMQYSLDAGGKRIRPVLVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + N N+   L+   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E  AI+A
Sbjct: 55  LTLEVLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT +FE+I++ K  L    + +++  L H+ G  GM+GGQ LD+  E   I+   +
Sbjct: 115 GDALLTKSFELIANDKN-LDAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I K KTGAL+ F+  S A +A+ ++     L CF E+LG++FQ+ DDLLD   D  K
Sbjct: 174 EQIHKAKTGALLKFSILSAADIANVNKEILNTLDCFSEHLGLMFQIKDDLLDVYGDEKK 232


>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
 gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
          Length = 299

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 6/235 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M    P+ ++     +  ++++ L +     +    +RL  A+RY+LL GGK++R  L  
Sbjct: 1   MRSASPAGVEGFLA-LREVIEEYL-EGLRFTEEPALERLQEAMRYSLLAGGKRVRPLLCM 58

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E ASLF       L   AAIE IH +SLIHDDLP+MDN   RRGKPT H ++ E  AI+A
Sbjct: 59  ESASLFGAPPERVLPSAAAIELIHTFSLIHDDLPAMDNDDFRRGKPTSHKKFGEAMAILA 118

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+     +  +I+  +    + + + ++  L H  GL G+ GGQ LD           ++
Sbjct: 119 GDAFFGESLALITDHQEGSAEQVLA-VVRELAHATGLAGLAGGQALDLEHTGRRAGPKEL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +    KTGAL+  +   GAI+A A +   E +  +   LG+ FQ+ DD+LD   
Sbjct: 178 ELTHHHKTGALIRASARIGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVG 232


>gi|73667184|ref|YP_303200.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake]
 gi|72394325|gb|AAZ68602.1| farnesyl-diphosphate synthase [Ehrlichia canis str. Jake]
          Length = 283

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 90/215 (41%), Positives = 128/215 (59%), Gaps = 3/215 (1%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+ +  S +   + D LL++IRY++   GK IR FLV   A +F+VN    L V AA+E 
Sbjct: 24  LIQKLESMLPENNQDILLTSIRYSIFSPGKHIRPFLVNAVAQMFDVNVDRTLPVSAAVEI 83

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP MDN  IRRG+ + H +++E  AI+ G+ LLT AFEI+S+        
Sbjct: 84  IHVYSLIHDDLPGMDNEEIRRGQASSHKKFNEAVAILTGDALLTLAFEILSTINE--SPL 141

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           IR +++ +L H IG QGM+ GQ+LD +    D  ++  I  +KT       CE G I+ +
Sbjct: 142 IRCRIIKTLAHAIGYQGMIQGQILDTETIAKDINEIQNIHVLKTAQFFSAICELGGILGN 201

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AS  +   L  +G NLG  FQ+ DD+ D ++D  K
Sbjct: 202 ASNIQLNALANYGLNLGHAFQIKDDIADEDQDKSK 236


>gi|194466515|ref|ZP_03072502.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
 gi|194453551|gb|EDX42448.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
          Length = 290

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 87/239 (36%), Positives = 127/239 (53%), Gaps = 15/239 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + + L    ++I+  L   L              L  A+ Y+L+ GGK++R  L      
Sbjct: 1   MSTPLPILKEQIENYLSKSLAADVDQA------TLRDAMNYSLMAGGKRLRPALTLATIE 54

Query: 64  LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +     +   LR  +A+E +H YSLIHDDLP+MDN  +RRGKPT H ++    A +AG+G
Sbjct: 55  MLGGTINDDLLRAASALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDG 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
           LLT AF+ ++     L  N+RSQL L L    G  GM+ GQ  DI+ E   +   Q+  +
Sbjct: 115 LLTLAFQWVAD--NHLPANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYL 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            + KTG L+ +A  +G IM   S   K+ L  FGEN G+ FQ+ DDL+D     E++ K
Sbjct: 173 HRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDILSTTEEMGK 231


>gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 298

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 90/244 (36%), Positives = 142/244 (58%), Gaps = 13/244 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   + + ++  +K++D+ L+  ++       +Q+ D L+ A+RY+L  GGK++R  L+ 
Sbjct: 1   MKLDINNYIKFWAKKVDSWLEQYVISN-----SQYIDGLVEAMRYSLFAGGKRLRPALIY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +F+          AA+E +H YSLIHDDLP+MD+  +RRGKPT H+ Y E  AI+A
Sbjct: 56  SSFGIFDGYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILA 115

Query: 120 GNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDET 175
           G+ LLT AFEI+  SS    +   +  +    L    G +GM+GGQ  D++ E  F ++ 
Sbjct: 116 GDALLTKAFEIMTSSSLNPDVDPVMMLEAANKLAIATGEKGMVGGQYADLKAEGGFFNDG 175

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            V  I   KT AL+ + CE GAI+ +A+  EK+ +  FG+ +G+ FQ+ DD+LD     E
Sbjct: 176 TVSFIHLNKTAALISYCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILDLTCTTE 235

Query: 233 DLPK 236
           +L K
Sbjct: 236 ELGK 239


>gi|291520797|emb|CBK79090.1| Geranylgeranyl pyrophosphate synthase [Coprococcus catus GD/7]
          Length = 303

 Score =  214 bits (545), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 131/236 (55%), Gaps = 13/236 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L  +L+E +  I+ +L+ +L + A   +T     + SA+RY+L+ GGK+IR  L+ E   
Sbjct: 3   LEQELKEKTADIEKLLERMLPEEAGLQKT-----IFSAMRYSLMAGGKRIRPLLIAETYR 57

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F   +   A    AAIE IH YSLIHDDLP++DN   RRG+ T H  Y E  AI+AG+ 
Sbjct: 58  FFGGTDMALAEPFMAAIEMIHTYSLIHDDLPALDNDDYRRGRLTSHKVYGEAMAILAGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI----GLQGMLGGQMLDIQ--DEFIDETQ 176
           LL YAFE  S      +D+     ++     +    G+ GM+GGQ++D++   + I E  
Sbjct: 118 LLNYAFETASKAMDHARDDEELLRVMKAFRILSSKPGINGMIGGQVVDVELTGKPIPEKT 177

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I ++KTGAL+  A   GA +A AS  +   +     ++G+ FQ+ DD+LD   
Sbjct: 178 LRFIFELKTGALIEAAMMIGAQLAGASDEQIAAVEKAAGDIGMAFQIQDDVLDVIG 233


>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
           IAM 14863]
 gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
           IAM 14863]
          Length = 297

 Score =  214 bits (545), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 11/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M G     +    ++++  LD       +        RL+ A+RY+LL GGK++R  L  
Sbjct: 1   MRGEFQQYMAARRQQVEAALDRYTAGLDA------PSRLVEAMRYSLLAGGKRLRPILTI 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             + LF +     +    A+E IH YSLIHDDLP MD+  +RRG+PT H  Y E  A++A
Sbjct: 55  AASELFGLEAADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLA 114

Query: 120 GNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DET 175
           G+ LLT AF +++      ++      +    L H  G +GM+GGQ+ D+  E    DE 
Sbjct: 115 GDALLTQAFALMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEP 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q+  I  +KTGAL   A   G I+A A + + +RL  +  + G+ FQ+ DD+LD   D  
Sbjct: 175 QLRRIHSLKTGALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAA 234


>gi|260438375|ref|ZP_05792191.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876]
 gi|292808961|gb|EFF68166.1| geranyltranstransferase [Butyrivibrio crossotus DSM 2876]
          Length = 297

 Score =  214 bits (545), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 10/235 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN     +L+  +   D ++ + L +         N  L  A+ Y++  GGK++R  L+ 
Sbjct: 1   MN--FKEELRIRTDYADNVVKEFLSKEEG-----FNKELCEAMNYSVNAGGKRLRPILLH 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF  +        AA E +H YSL+HDDLP++DN   RRG PT H ++ E TAI+A
Sbjct: 54  TFYKLFGGDSDIVKPCMAAYEMLHTYSLVHDDLPAIDNDNYRRGMPTTHARFGEATAILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+GLL  A+E               + +       G+ GMLGGQ  D     E I +  +
Sbjct: 114 GDGLLHQAYETFIKIFDTEISTRTVKALKIFGDKTGINGMLGGQSADVLHTGEIISDELL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + I + KTGAL+  A  +G+++A  +  +  +++  GE +G+ FQ+ DD+LD   
Sbjct: 174 YYIYEKKTGALIEGAMLTGSVLAGCNDEDLAKIKRVGELVGLAFQIKDDILDIYG 228


>gi|77919267|ref|YP_357082.1| geranyltranstransferase [Pelobacter carbinolicus DSM 2380]
 gi|77545350|gb|ABA88912.1| farnesyl-diphosphate synthase [Pelobacter carbinolicus DSM 2380]
          Length = 296

 Score =  214 bits (545), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 121/235 (51%), Gaps = 10/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L + L+E   ++D  LD  L       +      L  A+RY+    GK+IR  L+    
Sbjct: 2   DLNAYLKERRAQVDKALDTYLP-----GEDVLPISLHKAMRYSTFAAGKRIRPILMMAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     +    A+E IH YSLIHDDLP+MD+   RRG+PT H  Y +  AI+AG+ 
Sbjct: 57  EAVGGTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLS--LTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LLT AF ++S        ++ +   +S  +    G  GM+GGQ++D+  E   ID   + 
Sbjct: 117 LLTEAFILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLE 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I   KTGAL+  + +SGA++  AS  + + L  + +  G+ FQ+ADD+LD   D
Sbjct: 177 YIHTRKTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGD 231


>gi|154502459|ref|ZP_02039519.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
 gi|153796855|gb|EDN79275.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
          Length = 300

 Score =  214 bits (545), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 10/234 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
                 +E + +I+ IL   L +        + + ++ A+ Y+ L GGK++R  L+ E  
Sbjct: 6   SFKEIQKEKTAQIERILKAYLPRAQG-----YQEVIMDAMSYSMLAGGKRLRPMLMQETY 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AAIE IH YSL+HDDLP+MDN   RRG+ T H+ Y E   I+ G+ 
Sbjct: 61  RLFGGADSVIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMGILTGDA 120

Query: 123 LLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LL YAFE  +S      +   +  + +  L    G+ GM+GGQ++D++     ID  ++ 
Sbjct: 121 LLNYAFETAASAFETAPEKSLLIGKAIRILGQKAGIYGMIGGQVVDVKSSGKKIDGEKLE 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I ++KTGAL+  +   GA++A A     + +      +G+ FQ+ DD+LD   
Sbjct: 181 FIYRLKTGALIEASMMIGAVLAGADDESVQVVEEIAAKVGMAFQIQDDILDVIS 234


>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
 gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
          Length = 302

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 13/244 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   + + L E +  ++  L + L       +     +L  ++ Y+L  GGK++R  LV 
Sbjct: 1   MITDIKTYLHECAALVEKSLPEALP-----AEWNIPPQLRESMLYSLQAGGKRLRPALVL 55

Query: 60  ECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
             A   +     A   L V  AIE IH YSL+HDDLP+MDN   RRGK T H  + E  A
Sbjct: 56  AAAEAVHGQAAAARHALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMA 115

Query: 117 IIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FI 172
           I+AG+ LLT+AF +I   +    +   +   ++  L    G +GM+GGQ  D+Q E    
Sbjct: 116 ILAGDALLTHAFHLIPKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGIT 175

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              ++  I   KT  L+ F+  +G  +  AS  + E LR +G N+G+ FQ+ DD+LD   
Sbjct: 176 SIEELEYIHLHKTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIG 235

Query: 233 DLPK 236
           D  K
Sbjct: 236 DEKK 239


>gi|54308001|ref|YP_129021.1| putative geranyltranstransferase [Photobacterium profundum SS9]
 gi|46912427|emb|CAG19219.1| putative geranyltranstransferase [Photobacterium profundum SS9]
          Length = 300

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/239 (36%), Positives = 119/239 (49%), Gaps = 10/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           N  L   L+    R +  L   L       Q   +  L+  ++Y  LLGGK+ R FL   
Sbjct: 4   NLTLSQSLKHYQDRSNQHLAQWL-----EAQPFADQALVKTMKYGTLLGGKRARPFLTYI 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +            AA+ECIH YSLIHDDLP+MD+  +RRG PT HI +DE  AI+AG
Sbjct: 59  TGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDDDELRRGHPTCHIAFDEALAILAG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           + L T AFEI++  K     N  R  ++  L    G  GM  GQ LD++ E   +D  Q+
Sbjct: 119 DALQTLAFEILADGKLNDDGNTQRIAMIKELAQASGAAGMCVGQALDLEAEGKHVDLQQL 178

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             I K KTGAL+  A   GA+ A         +L  F + +G+ FQ+ DD+LD   D  
Sbjct: 179 ETIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLNQFADAIGLAFQVQDDILDVTSDTE 237


>gi|238783627|ref|ZP_04627648.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
 gi|238715505|gb|EEQ07496.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
          Length = 306

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 89/244 (36%), Positives = 133/244 (54%), Gaps = 13/244 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           +     +L  + +R++  L D +              L+ A+RY A+LGGK++R +LV  
Sbjct: 7   STDFSQQLAAHQQRVNQALLDFIAPL-----PFGESDLVEAMRYGAVLGGKRLRPYLVYA 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F ++        AAIECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG
Sbjct: 62  TGQMFGLSLTALDAPAAAIECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAG 121

Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           + L T AF I++  +   + D  R  ++  L H  G+ GM GGQ LD++ E   I   ++
Sbjct: 122 DALQTLAFTILAEAEMPDVADKDRLAMVAELAHASGVAGMCGGQALDLEAEARQISLAEL 181

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEED--- 233
             I + KTGAL+  A   GA+ A A        L  + E +G+ FQ+ DD+LD   D   
Sbjct: 182 EQIHRHKTGALIRAAVRLGALAAGARGRAALPLLDRYAEAIGLAFQVQDDILDVIGDTAT 241

Query: 234 LPKK 237
           + K+
Sbjct: 242 IGKR 245


>gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
           16/4]
          Length = 305

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 11/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            + ++L   ++  + ++   L              +  A++Y++  GGK++R  L+ E  
Sbjct: 10  DINNELIVRAEAAEDVVIRFLPDVEG-----LQSSIFDAMQYSVTAGGKRLRPILMNETF 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF           AAIE IH YSL+HDDLP+MDN  +RRGKPT H  Y E   ++AG+ 
Sbjct: 65  TLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMDNDSLRRGKPTTHAVYGEAMGVLAGDA 124

Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQV 177
           LL YAFE   +      D +R  + M  L    G+ GM+GGQ++D++ E     + + ++
Sbjct: 125 LLNYAFETALNAYDADIDTVRVTEAMRILARKAGVFGMIGGQVVDVESEKKQLEMTKEKI 184

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             I ++KTGAL+  A   GA++A A++ +   +    + +G+ FQ+ DD+LD   D  
Sbjct: 185 DFIYELKTGALIEAAMMIGAVLAGATEQQVTTVENVAKKIGLAFQIQDDILDVIGDEA 242


>gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
 gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
          Length = 295

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 84/239 (35%), Positives = 140/239 (58%), Gaps = 15/239 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +    +E++  I+ +++  + +  S      + RL  +++Y++  GGK+IR  L+    +
Sbjct: 1   MKEFTKEHAPLIEEVMERFVKEHTS------DQRLFESMQYSIQAGGKRIRPLLLVATVA 54

Query: 64  LFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+    TA+ +  AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+G
Sbjct: 55  AFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDG 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLT AF++++    +++ N +  L+  L+   G QGM+ GQ  DIQ E   +   ++  I
Sbjct: 115 LLTAAFQLVAMA--EIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSI 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            + KTG L+ FA  +G ++A  ++     L  F +++G+ FQ+ DDLLD     E+L K
Sbjct: 173 HERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGK 231


>gi|225076775|ref|ZP_03719974.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens
           NRL30031/H210]
 gi|224951873|gb|EEG33082.1| hypothetical protein NEIFLAOT_01826 [Neisseria flavescens
           NRL30031/H210]
          Length = 298

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
           MN    L +  Q+   + + +L   L       ++Q    L  A+RY  L GGK++R  L
Sbjct: 1   MNPANELKTWQQKAQAQTELLLVHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V   + L   N     +  AAIE +H YSL+HDD+P+MDN  +RRGKPT H+QYDE TA+
Sbjct: 56  VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           + G+ L T AF+++S P T L    +  ++ +L    G  GM GGQ +D+ +  + +++ 
Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           ++  +  +KTGAL+  A   GA+     +  + + L  +   LG+ FQ+ DD+LDCE D 
Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADT 234

Query: 235 P 235
            
Sbjct: 235 A 235


>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
 gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
          Length = 303

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 129/241 (53%), Gaps = 16/241 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
                LQ  ++ I+ +LD+ L    +        RL  A+RYA+LGG K+IR+ LV    
Sbjct: 7   AFADWLQGRAQHIEAVLDECLPAADA-----LPARLHEAMRYAVLGGGKRIRAALVYAAG 61

Query: 63  SLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
               VN           R  AA+E IH YSLIHDDLP MD+  +RRG+PT H+Q+DE TA
Sbjct: 62  QACPVNGSAVAIQASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATA 121

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174
           ++AG+ L   AFE+++     +   +  Q   +L    G  GM GGQ +D+    + +  
Sbjct: 122 MLAGDALQPLAFELLAD--MPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSR 179

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            ++  +  MKTGA++  +   G I++ AS + ++ L  + + +G+ FQ+ DD+LD   D 
Sbjct: 180 DELQTMHSMKTGAMLACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADS 239

Query: 235 P 235
            
Sbjct: 240 A 240


>gi|187250684|ref|YP_001875166.1| geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
           Pei191]
 gi|186970844|gb|ACC97829.1| Geranylgeranyl pyrophosphate synthase [Elusimicrobium minutum
           Pei191]
          Length = 334

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 45/270 (16%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN      L+  +  ++  L   +L+ A+       + +  ++ Y+L  GGK++R  LV 
Sbjct: 1   MNE-FEKYLKTKAAFVEKGLSKYILKIAN-----SPEVIKDSMAYSLEAGGKRVRPVLVM 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A  F       +    A+E +H YSLIHDDLPSMDN  +RRGKPT H  Y E  A++A
Sbjct: 55  AAAEAFGKKAADVMPAACAVEMVHTYSLIHDDLPSMDNDSLRRGKPTNHKVYGEDLALLA 114

Query: 120 GNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----- 172
           G+ LLTYAFE+ +       +      + +    + +G +GM+GGQ+ DI  E +     
Sbjct: 115 GDALLTYAFEVFAQNGDVKSIGHKNTLKALQLFANGVGSEGMVGGQVTDIYAEGLIEGKF 174

Query: 173 -------------------------------DETQVFMIQKMKTGALMCFACESGAIMAH 201
                                           ET +  I   KTGAL+  + E+GA++A 
Sbjct: 175 KRITAVKKESKALSKKSVKYFLMPAKLKEVSAETVLSYIHANKTGALIRSSIEAGAVLAG 234

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           AS+ ++  +R +G  +G+ FQ+ DD+LD  
Sbjct: 235 ASEADRANMRKYGNAMGLAFQIVDDILDVT 264


>gi|190575335|ref|YP_001973180.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
           K279a]
 gi|190013257|emb|CAQ46891.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
           K279a]
          Length = 292

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 10/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
                 RI++ LD  L   A     +   RL  A+RY++LGG K++R  LV     LF  
Sbjct: 7   FARWRDRIESQLDAALPSPA-----EAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGT 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              +      ++E IH YSL+HDDLP+MD+  +RRGKPT H+ +DE TAI+AG+ L T A
Sbjct: 62  QPESLDAAAMSVELIHAYSLVHDDLPAMDDDALRRGKPTTHVAFDEATAILAGDALQTRA 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
           F +++     L   +R   + +L H  G  GM GGQ   +D   +      +  +  +KT
Sbjct: 122 FGLLADA--PLPATLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKT 179

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           GAL+  A   GA+   A + +  +L  F + LG+ FQ+ DD+LD E 
Sbjct: 180 GALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEA 226


>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
 gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
          Length = 298

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/220 (35%), Positives = 120/220 (54%), Gaps = 5/220 (2%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
           T LD + ++    +       L  A+RY +L GGK++R  LV   A   + +   ALR  
Sbjct: 12  TALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEAALRAA 71

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS--SP 134
            A+E IH YSLIHDD+P MDN  +RRGKPTVH+QY E  A++AG+ +   AFE+++    
Sbjct: 72  CAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVLTPEDT 131

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFA 192
              +   ++++L   L    G+ GM GGQ +D     + +DE  +  +   KTGAL+  +
Sbjct: 132 DDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTGALLQAS 191

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              GA     +  + + L  +G  +G+ FQ+ DD+LD  +
Sbjct: 192 VLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQ 231


>gi|304440276|ref|ZP_07400166.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371325|gb|EFM24941.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 289

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 12/232 (5%)

Query: 15  RIDTILD--DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
           R + +++  D  L T          ++  +++Y+L  GGK++R  L     S+FN +   
Sbjct: 5   RYEELINIIDQNLYTNIPTTDDFQKKIYESMKYSLSTGGKRVRPILALVSYSIFNDDSKN 64

Query: 72  ---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +    A+E IH YSLIHDDLP+MDN  IRRGKPT H  Y+E  AI+AG+GLL  A 
Sbjct: 65  FSEIIPFAVALEYIHTYSLIHDDLPAMDNDDIRRGKPTNHKVYNEAIAILAGDGLLNLAA 124

Query: 129 EIISSPKTQLKDNIRSQLMLSLTH----NIGLQGMLGGQ--MLDIQDEFIDETQVFMIQK 182
           E+++     + D I+ +  +        + G+QGM+GGQ   +D+  + +   +V  + K
Sbjct: 125 EVVAKELEGITDPIKLKRAIKSFRYIFSSSGIQGMVGGQTIDIDLSVDEMSLEEVETMYK 184

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +KTGAL+      GAIM  A+  E   +  + E LG+ +Q+ DD+LD E+DL
Sbjct: 185 LKTGALIKAPLAVGAIMGGATPEELISIEGYAEQLGLQYQIKDDILDYEDDL 236


>gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
 gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
          Length = 296

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 92/240 (38%), Positives = 130/240 (54%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L     E  K ID  L   +         +  D L  A+ Y+L  GGK++R  L+ 
Sbjct: 1   MNEQLKGFFNEYRKLIDARLPSYIEDL------RAPDTLKQAMTYSLKAGGKRVRPLLLL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                FN        +  AIE IH YSLIHDDLP+MD+   RRG+PT H  Y E  AI+A
Sbjct: 55  ATLDGFNRPIEDGFDLACAIEMIHTYSLIHDDLPAMDDDDTRRGQPTNHKVYGEAMAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQL-MLSLTHNIGLQGMLGGQMLDIQDEFIDET--Q 176
           G+ LLTY+FE+I+S     ++  ++   +  L    G  GM+GGQ+ DI+ E    T  +
Sbjct: 115 GDALLTYSFELITSMSAVREEPAKALTLVRELAKASGPCGMVGGQVADIEGENRSLTVQE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I   KTG L+ ++  +GA++A AS+ + E LR F   LG++FQ+ DD+LD E D  K
Sbjct: 175 LADIHHHKTGDLLAYSIIAGAVLADASEEDLEHLRMFAIELGLLFQIKDDILDVEGDSDK 234


>gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
           (FPP synthase) [NC10 bacterium 'Dutch sediment']
          Length = 312

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/248 (33%), Positives = 121/248 (48%), Gaps = 23/248 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             L   L E    +D  L+  L Q +          +  A+RY++  GGK++R  L+   
Sbjct: 4   EELRRYLDERRLLVDEALEQYLPQASDP-----PKEIHEAVRYSVFAGGKRLRPILILAA 58

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                     AL   AAIE IH YSLIHDDLP+MD+   RRG+ T H  Y E  AI+AG+
Sbjct: 59  TEAAGGQMEQALGAAAAIEMIHTYSLIHDDLPAMDDDDYRRGRLTCHKVYGEAMAILAGD 118

Query: 122 GLLTYAFEIISSPKTQLKD---------------NIRSQLMLSLTHNIGLQGMLGGQMLD 166
            LLT AF ++S+                        R  ++  +    G +GM+GGQ++D
Sbjct: 119 ALLTQAFILLSAENPPCPPLAKGGWGDLKGVYDSEARLMVIREIAEAAGSKGMVGGQVVD 178

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  +D  ID   +  + + KTGAL+      G I+A A   + E L  +GE +G+ FQ+ 
Sbjct: 179 MLQEDREIDLPTLTYLHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGERIGLAFQIV 238

Query: 225 DDLLDCEE 232
           DD+LD E 
Sbjct: 239 DDILDLEG 246


>gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
           [Stigmatella aurantiaca DW4/3-1]
 gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase,   (ggppsynthetase) (ggps)
           [Stigmatella aurantiaca DW4/3-1]
 gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 312

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 12/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
               +L E  + +   LD+     A H        L +AIR ALL  GK++R  L  E  
Sbjct: 18  DFRRRLHERQQLVARALDEHFPPGAGH--------LTAAIREALLADGKRLRPILCLEAC 69

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   AL    A+E IH  +L+HDDLP+MD+   R G+P +H  + E  AI+AG+ 
Sbjct: 70  EWVGGSVKAALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDA 129

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180
           LL +AF +++S +  +     +  +  L   +G  G+ GGQ LD+  Q E +   ++  +
Sbjct: 130 LLVHAFGLLASTR-GVPAERVTVAIRRLCQALGTTGLAGGQALDVLSQTEGVTPEKLDHV 188

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KT +    A   GA M  A  ++ E L  +G  LG  FQ++DDLLD  ++  K
Sbjct: 189 HTWKTASFFEVAIVIGAEMGGADASQVEALARYGMLLGRAFQISDDLLDARDEKGK 244


>gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
           27755]
 gi|166029775|gb|EDR48532.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
           27755]
          Length = 300

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/244 (34%), Positives = 132/244 (54%), Gaps = 13/244 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +N     + ++  + I+  L + L +     Q  +   ++ A+ Y+LL GGK++R  L+ 
Sbjct: 3   LNLDFKVQKEQKVREIEDSLQNYLPK-----QKGYQKIIMEAMGYSLLAGGKRLRPMLMK 57

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E  +LF  +        AAIE +H YSL+HDDLP+MDN   RRG+ T H+ Y E  AI+A
Sbjct: 58  ETYTLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILA 117

Query: 120 GNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           G+ LL YAFE          ++       +  L    G+ GMLGGQ++D+++    + + 
Sbjct: 118 GDALLNYAFETAVKAFVLEPEDSMTIGNAIRVLGEKAGIYGMLGGQVIDVKETGHAVSKD 177

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            +  I ++KTGAL+  A   GAI+  ASQ E + +      +G+ FQ+ DD+LD    +E
Sbjct: 178 VLDTIYELKTGALIEAAMMIGAILGGASQEEVKTVERIASLVGLAFQVQDDILDVISTQE 237

Query: 233 DLPK 236
           +L K
Sbjct: 238 ELGK 241


>gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
          Length = 293

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/234 (37%), Positives = 142/234 (60%), Gaps = 10/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + + L+  ++ I+  L  LL       Q +   +L  +++Y LL GGK+IR  L    A 
Sbjct: 4   IKNILKAKAEVIEENLIKLL-----DCQDELAPQLTKSMKYTLLSGGKRIRPILTLLIAE 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   N+  AL+ G+A+E IH YSLIHDDLP+MD+  +RRGK T H+ + E TAI+AG+GL
Sbjct: 59  LLEGNYQAALKAGSALEMIHSYSLIHDDLPAMDDDKLRRGKKTNHLVFGEATAILAGDGL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
           LTYAF++++    +LK +++ +++ +     G QGM+GGQ+LD++ E  D T  ++  + 
Sbjct: 119 LTYAFQVLADL--ELKPDLKVKIIANTAKFSGYQGMVGGQVLDLEAENKDLTLQEMQKVH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + KTGAL+  +  +G   +     EK+ L  + E +G++FQ+ DDLLD   +  
Sbjct: 177 QAKTGALIKASVLNGVYCSDFKPEEKKALLTYAEKIGVLFQIVDDLLDLTGETE 230


>gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 288

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 90/228 (39%), Positives = 126/228 (55%), Gaps = 12/228 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           +ID +L + L +     +T    RL  A+RY++L GGK+IR  L+             A 
Sbjct: 8   KIDEMLXNYLAK-----ETGECTRLQEAMRYSVLQGGKRIRPILMRLAYEAVGGTGNIA- 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               AIE +H YSLIHDDLP+MDN  +RRG PT H+++DE TAI+AG+GLLT AFEI+  
Sbjct: 62  PYMCAIEFVHTYSLIHDDLPAMDNDALRRGLPTNHVKFDEATAILAGDGLLTLAFEIMLQ 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
                 D  ++     L    G  GM+ GQM D+  E   I    +  IQ  KTGAL+  
Sbjct: 122 DLVSDMDPAKAIAANILATGAGASGMVLGQMYDMFYEGKEISIEMLEKIQLNKTGALIKS 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           A + GA++ + S++E   L  +G  LG +FQ+ DD+LD      +L K
Sbjct: 182 ALKMGAVLGYGSESELFALELYGIYLGKVFQIIDDILDITGQVNELGK 229


>gi|241760634|ref|ZP_04758726.1| geranyltranstransferase [Neisseria flavescens SK114]
 gi|241318815|gb|EER55341.1| geranyltranstransferase [Neisseria flavescens SK114]
          Length = 298

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 12/241 (4%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
           MN    L +  Q+   + + +L   L       ++Q    L  A+RY  L GGK++R  L
Sbjct: 1   MNPANELKTWQQKAQAQTELLLAHFLPS-----ESQVPHTLHEAMRYVTLGGGKRLRPLL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V   + L   N     +  AAIE +H YSL+HDD+P+MDN  +RRGKPT H+QYDE TA+
Sbjct: 56  VLAASELGEANQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATAL 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           + G+ L T AF+++S P T L    +  ++ +L    G  GM GGQ +D+ +  + +++ 
Sbjct: 116 LVGDALQTQAFDVLSRP-TGLSAERQLAMLSTLAQASGSLGMAGGQAIDLANVGKAMNQA 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           ++  +  +KTGAL+  A   GA+     +  + + L  +   LG+ FQ+ DD+LDCE D 
Sbjct: 175 ELEQMHSLKTGALIRAAVALGALSCPDLTPAQIQTLDHYAAKLGLAFQVIDDVLDCEADT 234

Query: 235 P 235
            
Sbjct: 235 A 235


>gi|262382413|ref|ZP_06075550.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295291|gb|EEY83222.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 324

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 12/224 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
            + IL  +  + +    T     L   I Y L LGGK+IR  L     +++N +   A++
Sbjct: 4   FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E  H ++L+HDDL  MD    RR KPTVH  ++  TAI++G+ +L  A+++I S 
Sbjct: 64  PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGST 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
           +      +      +         + GGQ  D++ E    + E +   + ++KT  L+  
Sbjct: 122 EHGHLKQVLDLFTQTAAE------ICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + ++GA++  ASQ +   L  FG N+G+ FQL DDLLD   D  
Sbjct: 176 SLKTGALLGGASQEDASNLYAFGINIGLAFQLQDDLLDVYGDTA 219


>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
          Length = 341

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 14/232 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLV 58
           M   L S        I+T L++ +         ++  ++  A+RY++L  GGK+    + 
Sbjct: 46  MQFDLRSYWTTLISEINTKLEEAI-------PVKYPQQIYEAMRYSVLAKGGKRAPPVMC 98

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                LF  + L A     A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+
Sbjct: 99  VAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAIL 158

Query: 119 AGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           AG+ L    F  I S  P   + +    +++  +  ++G  GM  GQ LD++        
Sbjct: 159 AGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGA---PNS 215

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           V  +Q+ K G +   +   G  +  A+ ++  RLR +G  +G+++Q+ DD+L
Sbjct: 216 VDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDML 267


>gi|314936356|ref|ZP_07843703.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80]
 gi|313654975|gb|EFS18720.1| geranyltranstransferase [Staphylococcus hominis subsp. hominis C80]
          Length = 293

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 93/235 (39%), Positives = 135/235 (57%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   + E  + I+  LD ++        +  N +L  +++Y+L  GGK+IR  LV     
Sbjct: 2   LKKSMNELIEIINNNLDGIIK------SSPLNTKLEESMQYSLDAGGKRIRPVLVLLTLE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + N N+   L+   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E  AI+AG+ L
Sbjct: 56  VLNENYKKGLQTALALEMIHTYSLIHDDLPAMDNDDFRRGKLTNHKVYGEWKAILAGDAL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT +FE+I++ K  L    + +++  L H+ G  GM+GGQ LD+  E   I+   +  I 
Sbjct: 116 LTKSFELIANDKN-LDAETKVKVISRLAHDSGNLGMVGGQTLDMDSENTPIELHTLEQIH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           K KTGAL+ F+  S A +A+ ++     L CF E+LG++FQ+ DDLLD   D  K
Sbjct: 175 KAKTGALLKFSILSAADIANVNKEILNTLDCFSEHLGLMFQIKDDLLDVYGDEKK 229


>gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 295

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 12/234 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   L +  +RI+T L   L   +S         L  A+RY  LLGGK+IR FLV     
Sbjct: 4   LSQDLPQLQQRINTFLAQQLNVDSS------PSPLAEAMRYGVLLGGKRIRPFLVYATGR 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +        A++E +H YSLIHDDLP+MD+ ++RRG+PT HI +D  TAI+AG+ L
Sbjct: 58  MLGADLNQLDYAAASVEAVHAYSLIHDDLPAMDDDHLRRGQPTCHIAFDHATAILAGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
             +AFEI++     L+   +  L+ +L+   G++GM  GQ LD+  E   I   ++  I 
Sbjct: 118 QAFAFEILTQAPA-LQAEQKLALVQTLSQAAGVKGMCLGQSLDLISEQKHISLIELEQIH 176

Query: 182 KMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KTGA++  A + G I +    +    ++L+ + E +G+ FQ+ DD+LD E +
Sbjct: 177 RNKTGAMLSAAIQLGRICSPHFKNDTLAQQLQRYSEAIGLAFQVQDDILDIEGE 230


>gi|304322149|ref|YP_003855792.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
           [Parvularcula bermudensis HTCC2503]
 gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
           [Parvularcula bermudensis HTCC2503]
          Length = 296

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 92/230 (40%), Positives = 134/230 (58%), Gaps = 4/230 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M+  L   L   +  +   L++ L+   +        RL +A+ + AL GGK++R FLV 
Sbjct: 1   MSDTLSDYLITRANLVTKSLENRLVINRTESPALG--RLRAAMAHGALGGGKRLRPFLVL 58

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E AS+F  +   AL    AIE +HCYSLIHDDLP+MD+   RRG+P+VH  YDE  AI+A
Sbjct: 59  EAASIFGADDEAALPAATAIEMVHCYSLIHDDLPAMDDADTRRGRPSVHKAYDEAIAILA 118

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+GLLT AF +++   T        +L+  L    G  GM+GGQM+D+  +  DE  +  
Sbjct: 119 GDGLLTDAFALLTEEGTYTAPTA-CRLVRELALAAGSGGMVGGQMMDLYPDGGDEAAIVG 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           IQ+ KTGAL+  A   GAI+  A+ +++  LR +   +G  FQ+ DD+LD
Sbjct: 178 IQRRKTGALIEAAAVMGAIVGAAAPSDEAALRQYAAAVGEAFQVVDDILD 227


>gi|257462419|ref|ZP_05626833.1| dimethylallyltransferase [Fusobacterium sp. D12]
 gi|317060083|ref|ZP_07924568.1| geranyltranstransferase [Fusobacterium sp. D12]
 gi|313685759|gb|EFS22594.1| geranyltranstransferase [Fusobacterium sp. D12]
          Length = 290

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 72/230 (31%), Positives = 117/230 (50%), Gaps = 10/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
           ++   +  +  L+++L Q  +         +   ++YA L GGK+IR  L+    +L   
Sbjct: 1   MRNYREYFNEKLEEILAQYNT------PVWIAEGMQYACLQGGKRIRPQLLFMSLALLGK 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L    A+E IH YSL+HDDLP+MDN   RRG+ T H ++ E  AI+ G+ LLT A
Sbjct: 55  EIALGLPFALALEMIHSYSLVHDDLPAMDNDEYRRGQLTTHKKFGEANAILIGDALLTNA 114

Query: 128 FEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F ++       +      +++   +   G+ GM+GGQ +D+  E   I    +  I + K
Sbjct: 115 FSVMVRGSMGKVSSEKILEIVALFSEYAGVDGMIGGQAMDVAYEGKQISYKTLSFIHEHK 174

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           TG L+        I+  AS  +++ L  +G N+G+ FQ+ DD+LD E D 
Sbjct: 175 TGRLLLLPILVACILGDASLEQRKALEIYGRNIGLAFQIKDDILDVEGDF 224


>gi|148544405|ref|YP_001271775.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
 gi|184153768|ref|YP_001842109.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
 gi|227363170|ref|ZP_03847304.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
 gi|325682725|ref|ZP_08162241.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
 gi|148531439|gb|ABQ83438.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
 gi|183225112|dbj|BAG25629.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
 gi|227071776|gb|EEI10065.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
 gi|324977075|gb|EGC14026.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
          Length = 290

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 15/239 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + + L    ++I+  L   L              L  A+ Y+L+ GGK++R  L      
Sbjct: 1   MSTPLPILKEQIENYLSKSLAADVDQA------TLRDAMNYSLMAGGKRLRPALTLATIE 54

Query: 64  LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +     +   LR  +A+E +H YSLIHDDLP+MDN  +RRGKPT H ++    A +AG+G
Sbjct: 55  MLGGTLNDDLLRAASALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDG 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
           LLT AF+ ++     L  NIRSQL L L    G  GM+ GQ  DI+ E   +   Q+  +
Sbjct: 115 LLTMAFQWVAD--NHLPANIRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLTLNQLRYL 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            + KTG L+ +A  +G IM   S   K+ L  FGEN G+ FQ+ DDL+D     E++ K
Sbjct: 173 HRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGK 231


>gi|261365698|ref|ZP_05978581.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
 gi|288565797|gb|EFC87357.1| geranyltranstransferase [Neisseria mucosa ATCC 25996]
          Length = 298

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 84/241 (34%), Positives = 133/241 (55%), Gaps = 12/241 (4%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFL 57
           MN    L +  Q+   + + +L+  L       + Q    L  A+RY  L GGK++R  L
Sbjct: 1   MNPANELKAWQQKAQAQTELLLERFLPS-----ENQVPHTLHEAMRYVTLGGGKRLRPLL 55

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V   + L + +     +  AAIE +H YSL+HDD+P+MDN  +RRGKPT H++YDE TA+
Sbjct: 56  VLAASELGDADQNAVEQAMAAIEMVHVYSLVHDDMPAMDNDSLRRGKPTCHVKYDEATAL 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDET 175
           + G+ L T AF+++S P T L    +  ++ +L    G  GM GGQ +D+ +  + +++ 
Sbjct: 116 LVGDALQTQAFDVLSRP-TGLPAEHQIAMLSTLAKASGSLGMAGGQAIDLANVGKAMNQA 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           Q+  +  +KTGAL+  A   GA+       ++   L  +   LG+ FQ+ DD+LDCE D 
Sbjct: 175 QLEQMHSLKTGALIRAAVVLGALACPDLDSDDVRTLDDYAAKLGLAFQVIDDVLDCEADT 234

Query: 235 P 235
            
Sbjct: 235 A 235


>gi|188534651|ref|YP_001908448.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99]
 gi|188029693|emb|CAO97572.1| Geranyltranstransferase [Erwinia tasmaniensis Et1/99]
          Length = 299

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 10/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           L  + +R++  +   + Q         +  L++AI Y ALLGGK++R FLV    ++ + 
Sbjct: 7   LTSHYQRVNAAIQGFVSQL-----PFQSTPLVNAIEYGALLGGKRLRPFLVYATGNMLHA 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AA+ECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG+ L T A
Sbjct: 62  DDAALDAPAAAVECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEDAAILAGDALQTLA 121

Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F I++  P   +    R  ++  L    G+ GM GGQ LD+  E   +   ++  I + K
Sbjct: 122 FSILADAPMPGVTAESRVAMLSELAQASGVAGMCGGQALDLAAEGKRVTLDELEQIHRHK 181

Query: 185 TGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED 233
           TGAL+  A   GA+ A A        L  F + +G+ FQ+ DD+LD   D
Sbjct: 182 TGALIRSAVRLGALSAGAPGRAALPALDRFADAIGLAFQVQDDILDVIGD 231


>gi|167750990|ref|ZP_02423117.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
 gi|167656169|gb|EDS00299.1| hypothetical protein EUBSIR_01975 [Eubacterium siraeum DSM 15702]
          Length = 302

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 10/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +GG  +  +E     +  L  +      +        L  A  Y+L  GGK+IR  L  E
Sbjct: 12  DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYKA--LYDAASYSLEAGGKRIRPVLAFE 69

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +   +   A+    A+E IH +SLIHDDLP MDN  +RRG+P+ H  + E  A++AG
Sbjct: 70  MCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDNDDMRRGRPSCHKAHGEAVALLAG 129

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L  YA + I    + L    ++ ++  L       GM+ GQ +D   +F     +  +
Sbjct: 130 DALSAYAGKYICD--SDLSAEKKTAMIKELYDR--TLGMIEGQTIDTDGKFDTLDGLLSM 185

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +MKT  L+  A   G I A A + +    R +  ++G+ FQ+ DD+LD     E+L K
Sbjct: 186 YEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244


>gi|169824537|ref|YP_001692148.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328]
 gi|167831342|dbj|BAG08258.1| putative geranyltranstransferase [Finegoldia magna ATCC 29328]
          Length = 269

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 17/232 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           +E  K I+  L DL         +  ND++  A++Y L+  G K++R  L      +FN 
Sbjct: 4   KEIVKLINNSLKDL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    +    +IE IH YSL+HDDL  MDN   RRGK TVH +Y E  A++ G+ LL Y+
Sbjct: 55  SISEPMNYALSIELIHNYSLVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           FE++S     +K+ + +     +    G  GM+ GQ+LDI D  I E  +  I   KT  
Sbjct: 115 FEVLSES---IKNEVDAMCANYIVKKSGCFGMIRGQLLDI-DSKISEDNIIEIYDKKTCN 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           L+  +  S  I++        +L  +  NLG+ FQ+ DD++D E D+   KK
Sbjct: 171 LLKASTVSAGILSKVDHTTLLKLENYAFNLGMAFQIIDDIMDYENDIKINKK 222


>gi|300722008|ref|YP_003711288.1| geranyltranstransferase [Xenorhabdus nematophila ATCC 19061]
 gi|297628505|emb|CBJ89072.1| geranyltranstransferase (=farnesyldiphosphate synthase)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 315

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 116/202 (57%), Gaps = 5/202 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           +  L +A+++ A+LGGK++R FLV     +F ++  +      A+ECIH YSLIHDDLP+
Sbjct: 45  DSPLGTAMQHGAVLGGKRLRPFLVYSVGEMFGLSRKSLDAAALALECIHAYSLIHDDLPA 104

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHN 153
           MDN  +RRG+PT HI++ E  AI+AG+ L + AFE+++      +  + R  ++  L   
Sbjct: 105 MDNDDLRRGQPTCHIKFGESQAILAGDALQSLAFELLAHYDMPDVALSDRLAMVAELASA 164

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERL 210
            G  GM GGQ LD++ E   ID   +  I + KTGAL+  A   GA  A    +     L
Sbjct: 165 SGFAGMCGGQSLDLEAEGKQIDLASLEQIHRHKTGALIRAAARLGAYSAGQRGREVIPLL 224

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
             + + +G+ FQ+ DD+LD   
Sbjct: 225 DQYTQAIGLAFQVHDDILDVIG 246


>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
 gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
          Length = 293

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 128/236 (54%), Gaps = 9/236 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L S L    K ID  LD  L + +   +T     +  A+RY+L  GGK++R  L    A
Sbjct: 2   ELKSYLTARGKLIDQALDRFLPRASVKPRT-----IHKAMRYSLFAGGKRLRPALTLAAA 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              +     AL    A+ECIH YSLIHDDLP MD+  +RRG+PT H  + E  A++AG+ 
Sbjct: 57  EACDGEVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLT AFEI++  K   +  + +  +  L    G Q ++GGQ+ D++ E   I   ++  I
Sbjct: 117 LLTIAFEILAQAKETSRYKMPAL-IGELAGASGSQWLIGGQVADLEGEGKKISGAELKYI 175

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KT AL+  +   G + A+AS    + L  FG++LG+ FQ+ DD+LD  +   K
Sbjct: 176 HRCKTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEK 231


>gi|332704078|ref|ZP_08424166.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554227|gb|EGJ51271.1| Farnesyltranstransferase [Desulfovibrio africanus str. Walvis Bay]
          Length = 298

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 10/234 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             +   L  +++ ++  L   L            +RLL+++ Y+LL GGK++R  L  + 
Sbjct: 4   SAIKEDLLASARHVEGFLRTSLH------GRGVPERLLTSMEYSLLAGGKRLRPVLCLKW 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L  ++   A+   A++E IH YSLIHDDLP+MDN  +RRGKP+ H Q+DE TAI+AG+
Sbjct: 58  AKLCGLDMEKAMPFAASLELIHTYSLIHDDLPAMDNDDLRRGKPSNHKQFDEATAILAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
           GLLT AF +++     L        M ++    G  GM+GGQ LD++      I   Q+ 
Sbjct: 118 GLLTEAFSLMAQAAESLPAERVVCAMKAVAAAAGAGGMVGGQALDMEYTGKAGISLDQLQ 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  MKTGAL+  AC SGA++A +  +  E+   +G  +G+ FQ+ADD+LD   
Sbjct: 178 TMHAMKTGALIRVACLSGAMLAGSKASVLEKASTYGAAIGVAFQIADDILDVVG 231


>gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
 gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
          Length = 296

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 4/220 (1%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           LD +     + +       L  A+RY +L GGK++R  LV         +   ALR   A
Sbjct: 15  LDAVEAALEAWVPDNAPAGLGEAMRYGVLDGGKRLRPLLVMAACEALGGSREAALRSACA 74

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH YSL+HDD+P MDN  +RRGKPTVH++Y E  A++AG+ +   AFEI+ +P   +
Sbjct: 75  VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDAMQALAFEIL-TPDEGV 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196
           +  +++ L+  L    G  GM GGQ +D+ +    +DE  +  + + KTGAL+  + + G
Sbjct: 134 EPALQASLVRLLARAAGHAGMAGGQAIDLANTGRLLDEATLREMHRKKTGALLLVSVQMG 193

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A     +    + L  +GE +G+ FQ+ DD+LDC +   K
Sbjct: 194 AACGSPAPATWQALSEYGEAIGLAFQVVDDILDCTQASDK 233


>gi|289522987|ref|ZP_06439841.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503530|gb|EFD24694.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 298

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 83/243 (34%), Positives = 121/243 (49%), Gaps = 14/243 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  L    +   ++IDT L+++L         +  + L   I Y+LL GGK+IR  L   
Sbjct: 3   NVELKQIFESKKEKIDTYLENILNN------DEIPEVLCQCIAYSLLNGGKRIRPVLCQI 56

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A    ++    L + AAIE  H  SLIHDDLP MDN   RRGK T H  Y E  A++AG
Sbjct: 57  TAEKLGIDPDGVLPLAAAIEMAHTASLIHDDLPCMDNDDYRRGKLTNHKVYGEAMAVLAG 116

Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176
           + LL Y FE+     P+     +     +   +H IG  G+ GGQ LDI  E    +E  
Sbjct: 117 DSLLAYGFELCLQELPRLGFTQSNILNALKIFSHAIGPCGICGGQALDITQEGHEGEEEF 176

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           ++ + ++KT  L+  +  + A +  A +     L  +G +LGI FQ+ DD+LD      +
Sbjct: 177 LWKMCELKTATLLRASITASAALVGAGEKTMSCLHNYGTHLGISFQIIDDILDVTGTISE 236

Query: 234 LPK 236
           L K
Sbjct: 237 LGK 239


>gi|255022132|ref|ZP_05294135.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254968396|gb|EET25955.1| Polyprenyl synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 304

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 123/238 (51%), Gaps = 12/238 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
                  Q   +RI+ +LD+LL             RL  A+RY+ L GGK++R  LV   
Sbjct: 8   ESFAEFRQRRVERIEKVLDELLPPADI-----LPGRLHEAMRYSTLGGGKRVRPLLVYAG 62

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                +      R  AA+E IH YSL+HDDLP+MDN  +RRG+PT H  +DE TAI+ G+
Sbjct: 63  GQCLGLADELLDRAAAALEMIHAYSLVHDDLPAMDNDDMRRGRPTCHKAFDEATAILVGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179
            LLT+AF++++ P   L    +  + L L    G +GM+GGQ +D+     +  Q  +  
Sbjct: 123 ALLTHAFQVLAEPVPGLAPAQQLAMALDLARAAGSRGMVGGQAIDLAAVGHELAQPALEQ 182

Query: 180 IQKMKTGALMCFACES---GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +   KTG L+  A +     A +A    +    L  + + +G+ FQ+ DD+LD   D+
Sbjct: 183 MHLQKTGMLIRCALQLPLQAAAIA-PDASVASALLRYADRIGLAFQVQDDILDEIGDI 239


>gi|261402402|ref|YP_003246626.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7]
 gi|261369395|gb|ACX72144.1| Polyprenyl synthetase [Methanocaldococcus vulcanius M7]
          Length = 317

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 19/229 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  K+ID  L   + +         ND L +A ++ L  GGK++R +L     +L   N 
Sbjct: 6   EILKKIDEELKKYVDK---------NDELYNASKHLLFAGGKRLRPYLTVITYNLKKDNM 56

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L   AA+E IH Y+LIHDD+  MDN   RRGKPTVH+ Y E  AI+AG+ L   AFE
Sbjct: 57  EEILPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPIAILAGDLLYAKAFE 114

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187
            +S+ K   K +   +++     +     +  GQ +D++ E       +   + + KTGA
Sbjct: 115 AVSNIKDSKKAHDVLKIL-----SKACVEVCEGQAMDMKFENYNPTMEEYLEMIRKKTGA 169

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  + E GAIMA  S+ EK  L+ + + +G+ FQ+ DD+LD   D  K
Sbjct: 170 LLEASVEIGAIMADCSEEEKTALKEYAKRIGLTFQIQDDVLDLIGDKNK 218


>gi|71274508|ref|ZP_00650796.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
 gi|71900337|ref|ZP_00682472.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
 gi|71164240|gb|EAO13954.1| Polyprenyl synthetase [Xylella fastidiosa Dixon]
 gi|71729912|gb|EAO32008.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
          Length = 291

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 13/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L ++     +R D+ L+  L      + TQ   RL +A+RY +L GGK+IR  LV 
Sbjct: 1   MSKALFTR---WCQRTDSYLERTL-----SILTQAPQRLHAAMRYTVLSGGKRIRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF+V+        AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ 
Sbjct: 53  AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
           G+ L T AFE ++        ++R   + +LTH  G+ GM GGQ LDI      +T   +
Sbjct: 113 GDALQTLAFECLADA--PADASLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKAL 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  +K+G LM  A   GA+    S  +   L  F   LG+ FQ+ DD+LD E 
Sbjct: 171 EAMHALKSGTLMRAAVRMGALAGDPSPEDLHSLDTFAATLGLAFQVRDDILDIES 225


>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 293

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 12/236 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + +  K +D  L+ L+    +         +  A+RY++  GGK++R  L    A +F V
Sbjct: 5   INQAIKDVDEALERLIPAEDT-----FPQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGV 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             L AL    AIE +H YSLIHDDLP++D+   RRG+ + H  + +  AI+AG+ LLT A
Sbjct: 60  PRLHALPAACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLA 119

Query: 128 FEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           FE + +            +L  +L    G+ GM+GGQ++D+  E   ++   +  I + K
Sbjct: 120 FETLAAEATAYFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL     +SGAIM  AS  E +RL  F +N+G+ FQ+ DD+LD   D   L KK
Sbjct: 180 TGALFTCCIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKK 235


>gi|255994613|ref|ZP_05427748.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
 gi|255993326|gb|EEU03415.1| geranyltranstransferase [Eubacterium saphenum ATCC 49989]
          Length = 297

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 13/228 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           IDT + ++LL      +      L  A+ Y+L  GGK++R  L+ E A     +  + L 
Sbjct: 12  IDTKMREILLSKEEIAKP-----LREAMEYSLYAGGKRVRPVLLMEAARAVGGDPGSVLD 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             AAIE IH YSLIHDDLP++D+   RRGK T H  + E  AI+AG+GL   A+E++ S 
Sbjct: 67  YAAAIEFIHTYSLIHDDLPALDDDEYRRGKKTNHKVFGEAMAILAGDGLQALAYEVMLSC 126

Query: 135 KTQLKDN-----IRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA 187
             +  +       + +    +    G + M+ GQ++DI    +    T +  + +MKTGA
Sbjct: 127 IAKSDNMGDEILKKIKAANEIVMAAGTEAMVSGQVMDINSCSDKDSLTMLEKMHRMKTGA 186

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+  A   GAI+A A + +    R +GEN+G+ FQ+ DD LD   D  
Sbjct: 187 LITAAVVVGAILAGADERQVAAFRKYGENIGLAFQMVDDKLDVSGDSK 234


>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
 gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
          Length = 300

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 8/235 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
              + +    +R +  L  +L +      T   +RL  A+RYA+LGG K++R  LV    
Sbjct: 8   DFAAWMGAIQQRTEAALAGVLPE-----PTIAPERLHEAMRYAVLGGGKRVRPLLVHAAG 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++         R+  A+E IH YSL+HDD+P MD+  +RRGKPTVH++YD+ TA++ G+ 
Sbjct: 63  AIGGAQPERLDRIACAVELIHAYSLVHDDMPCMDDDVLRRGKPTVHVEYDDATALLVGDA 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
           L T AF++++S         +  ++  L    G +GM GGQ +D       +D  ++  +
Sbjct: 123 LQTLAFQVLASAPVTDMPTRQLGMIGLLAMASGSRGMAGGQAIDLAAVGRQLDLRELEFM 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KTGAL+  +   GA          ERL  + +  G++FQ+ DD+LD E D  
Sbjct: 183 HIHKTGALIRCSVLLGAQAGTVDGETLERLDRYAKLTGLLFQVVDDILDAEADTA 237


>gi|306844758|ref|ZP_07477343.1| geranyltranstransferase [Brucella sp. BO1]
 gi|306274930|gb|EFM56700.1| geranyltranstransferase [Brucella sp. BO1]
          Length = 288

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 111/224 (49%), Positives = 151/224 (67%), Gaps = 3/224 (1%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73
            ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A+LF  +    L
Sbjct: 2   EVEAALASLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           RV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+II+S
Sbjct: 62  RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCF 191
            +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ F
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ACE+GAI+A AS+ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 182 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 225


>gi|239832857|ref|ZP_04681186.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239825124|gb|EEQ96692.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 316

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 114/238 (47%), Positives = 155/238 (65%), Gaps = 3/238 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           ++    + L   +  ++  L  LL Q     +    +RLL+A+R+  L GGK++R FLV 
Sbjct: 16  LSTDFTAALNLRAMEVEMALTGLLDQRLRTGEIARPERLLAAMRHGVLNGGKRLRPFLVV 75

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A+LF       LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+A
Sbjct: 76  ESAALFGKGGDAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILA 135

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177
           G+ LLTYAF+I+SS +T L   IR +L+ +L    GL GM GGQ LD+  E    DE  +
Sbjct: 136 GDSLLTYAFDIVSSDETDLDPAIRVRLVSALARASGLGGMAGGQALDLMAETSKPDEAGI 195

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +Q MKTGAL+ FACE+GAI+A+AS  ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 196 ITLQAMKTGALIRFACEAGAIIANASTEDRERMAEFGSAIGLAFQLADDLLDVTADAE 253


>gi|302380702|ref|ZP_07269167.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3]
 gi|302311645|gb|EFK93661.1| polyprenyl synthetase [Finegoldia magna ACS-171-V-Col3]
          Length = 269

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 17/232 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           +E  K I+  L DL         +  ND++  A++Y L+  G K++R  L      +FN 
Sbjct: 4   KEIVKLINNSLKDL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    +    +IE IH YSL+HDDL  MDN   RRGK TVH +Y E  A++ G+ LL Y+
Sbjct: 55  SISEPMNYALSIELIHNYSLVHDDLECMDNDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           FE++S     +K+ + +     +    G  GM+ GQ+LDI D  I E  +  I   KT  
Sbjct: 115 FEVLSES---IKNEVDAMCANYIVKKSGCFGMIRGQLLDI-DSKISEDNIIEIYDKKTCN 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           L+  +  S  I++        +L  +  NLG+ FQ+ DD++D E D+   KK
Sbjct: 171 LLKASTVSAGILSKVDHTTLLKLENYAFNLGMAFQIIDDIMDYENDIKIEKK 222


>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
 gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
          Length = 367

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 21/249 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + E +  ++  LD      A+    +    L  A+RYALL GGK++R  L    
Sbjct: 65  FDFKAYMGERAVAVNRALD------AAVPAGEPPAALHDAMRYALLAGGKRVRPALCLAA 118

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            ++       A+   AA+E +H  SL+HDDLP MD+  +RRGKPT H+ Y E  A++AG+
Sbjct: 119 CAVVGGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 178

Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE 170
            LL+ +F  ++S  +   D           + +  L   IG +G++ GQ++D++     E
Sbjct: 179 ALLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSE 238

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +   ++  I   KT AL+  +   GAI+   +  + ERLR +  ++G++FQ+ DD+LD 
Sbjct: 239 TVPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDV 298

Query: 231 E---EDLPK 236
               E+L K
Sbjct: 299 TKSSEELGK 307


>gi|153008460|ref|YP_001369675.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151560348|gb|ABS13846.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 304

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 117/238 (49%), Positives = 157/238 (65%), Gaps = 3/238 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           ++    + L   +  ++  L  LL Q     +    +RLL+A+R+  L GGK++R FLV 
Sbjct: 4   LSTDFTAILNHRAMEVEMALTGLLDQRLKTGEIARPERLLAAMRHGVLNGGKRLRPFLVV 63

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A+LF       LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+A
Sbjct: 64  ESAALFGKGSDAVLRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILA 123

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177
           G+GLLTYAF+IISS +T L   IR QL+ +L    GL GM+GGQ LD+  E    DE  +
Sbjct: 124 GDGLLTYAFDIISSDETDLDAAIRLQLVSALARASGLGGMVGGQALDLMAETSKPDEAGI 183

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +Q MKTGAL+ FACE+GAI+A+AS  ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 184 ITLQAMKTGALIRFACEAGAIIANASSEDRERMAEFGSAIGLAFQLADDLLDVTADAE 241


>gi|153808868|ref|ZP_01961536.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185]
 gi|149128694|gb|EDM19912.1| hypothetical protein BACCAC_03168 [Bacteroides caccae ATCC 43185]
          Length = 324

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINNYISEIQFTREPKGLYEPIEYILSLGGKRIRPVLMLMAYNLYREDVASIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AAIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TAI++G+ +L  AF ++++  +
Sbjct: 66  AAIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDAMLILAFRLMTAAPS 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +           +    +  GQ LD++ E  D   E +   + ++KT  L+  + 
Sbjct: 124 EHLKEV------MELFGLTTLEICEGQQLDMEFESRDNVTEDEYIEMIRLKTAVLLAGSL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG  +G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGATAEDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|71898704|ref|ZP_00680873.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
 gi|71731469|gb|EAO33531.1| Polyprenyl synthetase [Xylella fastidiosa Ann-1]
          Length = 291

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 131/235 (55%), Gaps = 13/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L ++     +R D+ L+  L      + TQ   RL +A+RY +L GGK+IR  LV 
Sbjct: 1   MSKALFTR---WCQRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSGGKRIRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF+V+        AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ 
Sbjct: 53  AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
           G+ L T AFE ++        ++R   + +LTH  G+ GM GGQ LDI      +T   +
Sbjct: 113 GDALQTLAFECLADAPAD--TSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKAL 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++  +K+G LM  A   GA+    S  +   L  F   LG+ FQ+ DD+LD E 
Sbjct: 171 EVMHALKSGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIES 225


>gi|57641403|ref|YP_183881.1| bifunctional short-chain isoprenyl diphosphate synthase
           [Thermococcus kodakarensis KOD1]
 gi|37999032|dbj|BAD00093.1| isoprenyl diphosphate synthase [Thermococcus kodakaraensis]
 gi|57159727|dbj|BAD85657.1| bifunctional short-chain isoprenyl diphosphate synthase
           [Thermococcus kodakarensis KOD1]
          Length = 343

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 122/238 (51%), Gaps = 17/238 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
             L ++++E +K +D ++ +L+ +       +    L  A R Y L GGK++R F+V   
Sbjct: 5   DELFARIKEKAKDVDRVILELVPE-------KEPLELYKAARHYPLAGGKRVRPFVVLRA 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A     +   AL   A++E IH YSL+HDD+  MD   +RRG+PTVH  +    AI+AG+
Sbjct: 58  AEAVGGDPEKALYPAASVEFIHNYSLVHDDIMDMDE--LRRGRPTVHKLWGVNMAILAGD 115

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVF 178
            L + AFE I+  +   +   R   +L  T N+    +  GQ LDI+    E +   +  
Sbjct: 116 LLFSKAFEAIAKAEVPAEKKARILDVLVRTSNL----LCEGQALDIEFETKEEVTVEEYL 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   KTGAL   + E GAI+    +     L  +G N+GI FQ+ DD+LD   D  K
Sbjct: 172 KMISGKTGALFQGSAEIGAIVGTEDEEYIGALSKWGMNVGIAFQIWDDVLDLIADEEK 229


>gi|284048214|ref|YP_003398553.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 291

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 11/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S L+     ++  L          +       +  A+ Y++  GGK++R  L+   A
Sbjct: 2   ELRSYLRSRGALVNGYL-------QVRLGVGSISPVDKAMMYSVAAGGKRLRPILLMAAA 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     + V A +E IH YSLIHDDLPSMDN   RRG+ T H  + +  A++AG+G
Sbjct: 55  DAVGAKGSDFVAVAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNHKVFGDAMALLAGDG 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180
           LLT AFE++   +  +   +  +++  +    G  GM+GGQ LDI  +D+ +   Q+  +
Sbjct: 115 LLTQAFEVMLEQR-GVDPKVLLEVVRLVAKCAGPTGMVGGQALDITSEDQQLTLEQMKKL 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGA+   A   GA++  A       +  F    G+ FQ+ DD+LD E D  
Sbjct: 174 HEAKTGAMFVAAVRGGAMLGGADPETLRIMTHFANLFGLAFQITDDILDVEGDAK 228


>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
 gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
          Length = 324

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 11/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
                +QE   R +  L   +   A          L  A+RYA+L GGK++R  LV   A
Sbjct: 32  DFSVWMQERLVRTEEALSRWVGINA-------PAGLGEAMRYAVLDGGKRLRPLLVWAAA 84

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     LR G A+E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ E +A++AG+ 
Sbjct: 85  EAVGGQAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 144

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L   AFE++      +  +++++L   L    G  GM GGQ +D+    + + ETQ+  +
Sbjct: 145 LQALAFELLLPEDDGIPCSMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREM 204

Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            ++KTGAL+  +   GA   A         L  +G+ LG+ FQ+ DD+LD   D  
Sbjct: 205 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 260


>gi|327398343|ref|YP_004339212.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
 gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
          Length = 291

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 15/237 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65
           SKL    + +D  +++L          +       A+ Y    GGK+IR+ LV   A +F
Sbjct: 3   SKLSHYKELVDNFINEL------AQIKRFPPIFQEALFYTPKSGGKRIRAMLVMCAADMF 56

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   +L + +AIE +H YSLIHDDLP MDN   RRGKP  H  Y E  A++ G+GL T
Sbjct: 57  GADETKSLHIASAIELMHAYSLIHDDLPVMDNDDFRRGKPANHKVYGEDLALLVGDGLNT 116

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VFM 179
           Y F +I+     + D  + +++  L++N G+ GM+ GQ++D+               V  
Sbjct: 117 YTFNVIADA--PIDDARKVKIVKWLSNNAGIGGMVVGQVVDVLSSRDRLKGHSHKKLVNF 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I K KT  L+  +   GAI  +    + +RL  +G   G+ FQ+ DD LD   D  K
Sbjct: 175 IHKHKTAKLIQASVVCGAICGNPDDVQLDRLAKYGLYAGVAFQIIDDYLDVVGDEEK 231


>gi|333029215|ref|ZP_08457276.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
 gi|332739812|gb|EGJ70294.1| Polyprenyl synthetase [Bacteroides coprosuis DSM 18011]
          Length = 324

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 13/209 (6%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           + +    L   I Y L +GGK+IR  L+     L+  +    L    AIE  H ++L+HD
Sbjct: 20  EKKDPKNLYEPIHYVLSIGGKRIRPILMLLAYQLYKDDLEKTLPAACAIEVYHNFTLLHD 79

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DL  MD   +RR KPTVH  ++  TAI++G+ +L  ++ +++    +    + ++     
Sbjct: 80  DL--MDKSDLRRNKPTVHNVWNANTAILSGDAMLILSYHLLAKAPQENLSAVLNEF---- 133

Query: 151 THNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
             N     +  GQ  DI+ E    +       + ++KT  L+  + + GAI+A AS  + 
Sbjct: 134 --NKVTLEICEGQQYDIEFETKNSVKAEDYLDMIRLKTAVLLASSIKMGAIIAGASDEDT 191

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             L  FG N+G+ FQL DD LD   D PK
Sbjct: 192 NLLYDFGLNVGLAFQLQDDYLDVYGD-PK 219


>gi|289192774|ref|YP_003458715.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939224|gb|ADC69979.1| Polyprenyl synthetase [Methanocaldococcus sp. FS406-22]
          Length = 317

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 80/230 (34%), Positives = 125/230 (54%), Gaps = 19/230 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +   ++ID  L   + +         ND+L +A ++ L  GGK+IR +L      L   N
Sbjct: 5   KNILQKIDEELKTYVDK---------NDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDN 55

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L   AA+E IH Y+LIHDD+  MDN   RRGKPTVH+ Y E  AI+AG+ L   AF
Sbjct: 56  IREVLPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAF 113

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
           E +S     +KDN ++  +L +     +  +  GQ +D++ E  +    +   + + KTG
Sbjct: 114 EAVSR----IKDNKKAHEVLKILSKACV-EVCEGQAMDMEFENYYPTMEEYLEMIRKKTG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AL+  + E GA+MA  ++ E+E L+ + + +G+ FQ+ DD+LD   D  K
Sbjct: 169 ALLEASVEIGAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKK 218


>gi|327191787|gb|EGE58789.1| geranyltranstransferase protein [Rhizobium etli CNPAF512]
          Length = 387

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 117/236 (49%), Positives = 167/236 (70%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N++ I+ +LD LLL  A   +    + L  A+ YA+L GGK++R FLV E 
Sbjct: 89  DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVES 148

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVH+++DE TAI+AG+
Sbjct: 149 AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGD 208

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLTYAF+I+++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  
Sbjct: 209 SLLTYAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 268

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD   D  
Sbjct: 269 LQAMKTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAA 324


>gi|146304882|ref|YP_001192198.1| geranyltranstransferase [Metallosphaera sedula DSM 5348]
 gi|145703132|gb|ABP96274.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Metallosphaera sedula DSM 5348]
          Length = 327

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 16/236 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L    +E   +++  +D  L     H  T+    L  A RY +  GGK++R  +V   +
Sbjct: 2   DLDQYFEEIVAKVNATMDSFL-----HGDTRE---LYEASRYLISAGGKRLRPLVVVLSS 53

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L       A+  GAA+E +H ++LIHDD+  MD    RRG PTVH+++   TAI+AG+ 
Sbjct: 54  DLLGGERHRAILAGAAVEVLHNFTLIHDDI--MDQDTTRRGIPTVHVKWGIPTAILAGDL 111

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFM 179
           L   AF+I++     L  ++  +++   + ++ +  +  GQ +D++ E    I E     
Sbjct: 112 LHAKAFQILTESIKGLSGDVAYKVLDCFSRSVIV--VSEGQAMDMEFEKRWDIREKDYLE 169

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + + KT  L   +   G ++A  S+ E   L  FGE +GI FQ+ DD+L    D  
Sbjct: 170 MIRRKTAQLFACSAYLGGVLAGGSEEEVNNLYEFGEKMGIAFQIVDDILGITADEK 225


>gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 300

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 10/229 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
             +R + +L + L       Q   +  L+ A++Y  LLGGK+ R FL      +  V   
Sbjct: 14  YQQRSNDVLANWLA-----TQPFADKALIKAMQYGTLLGGKRARPFLTYVTGEMLGVTQD 68

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                 AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI +DE TAI+AG+ L T AFEI
Sbjct: 69  DLDTPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIAFDEATAILAGDALQTLAFEI 128

Query: 131 ISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGA 187
           +++ +     N  R  ++  L    G  GM  GQ LD++ E   +   Q+ +I + KTGA
Sbjct: 129 LANGQLSQDGNTQRIAMVSELAKASGAAGMCLGQTLDLEAEGKHVGLEQLELIHRHKTGA 188

Query: 188 LMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+  A   GA+ A         +L  + E +G+ FQ+ DD+LD   D  
Sbjct: 189 LIRCAVRLGALAAGEKGIAILPQLDKYAEAIGLAFQVQDDILDVISDTE 237


>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 33/244 (13%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +   +  ++  LD       S +  +   ++  A+RY+LL GGK++R  L    
Sbjct: 49  FDFMSYMIGKANSVNKALD-------SAVSLREPIKIHEAMRYSLLAGGKRVRPVLCIAA 101

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       AL    A+E IH  SLIHDDLP                 + E  A++AG+
Sbjct: 102 CELVGGEEFLALPAACAVEMIHTMSLIHDDLPF----------------FGEDVAVLAGD 145

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176
            LL++AFE +++   ++    R  + +  L   IG +G++ GQ++D+  E +D+      
Sbjct: 146 ALLSFAFEHLATETPEIISPARVVRAIGELAKAIGSEGLVAGQVVDLTSEGMDQNDVGLE 205

Query: 177 -VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
            +  I   KT  L+  A   GAI    +  E ERLR F   +G++FQ+ DD+LD     E
Sbjct: 206 LLEFIHLHKTAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVDDILDVTKSSE 265

Query: 233 DLPK 236
           +L K
Sbjct: 266 ELGK 269


>gi|259909275|ref|YP_002649631.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
 gi|224964897|emb|CAX56420.1| Geranyltranstransferase [Erwinia pyrifoliae Ep1/96]
 gi|283479330|emb|CAY75246.1| geranyltranstransferase [Erwinia pyrifoliae DSM 12163]
          Length = 299

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 86/232 (37%), Positives = 123/232 (53%), Gaps = 10/232 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           L  + +R++  L   + Q         +  L++A+ Y ALLGGK++R FLV     +   
Sbjct: 7   LTSHYQRVNAALQGFISQL-----PFQSTPLVNAMEYGALLGGKRLRPFLVYATGDMLRA 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N        AAIECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG+ L T A
Sbjct: 62  NDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILAGDALQTLA 121

Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F I++  P   +    R  ++  L    G+ GM GGQ LD+  E   +   ++  I + K
Sbjct: 122 FSILADAPMPGVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNELEQIHRHK 181

Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           TGAL+  A   GA+ A    +     L  F   +G+ FQ+ DD+LD   D  
Sbjct: 182 TGALIRSAVRLGALTAGERGRAALPALDRFANAIGLAFQVQDDILDVTGDTE 233


>gi|118591313|ref|ZP_01548711.1| geranyltranstransferase [Stappia aggregata IAM 12614]
 gi|118435985|gb|EAV42628.1| geranyltranstransferase [Stappia aggregata IAM 12614]
          Length = 301

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 104/235 (44%), Positives = 144/235 (61%), Gaps = 3/235 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M       L   +K ++  L+ LL   A   +     RLL+A+R+ AL GGK++R  LV 
Sbjct: 1   MTLDPNQHLTFQAKFVEATLETLLADQALPGEQVRPPRLLAAMRHGALNGGKRLRPVLVM 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A+LF       L+   A+E +HCYSL+HDDLP+MD+  +RRG+PTVH  YDE TAI+A
Sbjct: 61  ETANLFGRADDGVLQAACALELVHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDEATAILA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT AF++I+         +R +L   L    G  GM GGQMLD++ E     E ++
Sbjct: 121 GDALLTLAFDVITGEAVHADAAVRLRLSRELARASGFGGMAGGQMLDLESEHRERTEAEI 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +Q MKTGAL+ +AC +GAI+A A + + +RL  FGE +G+ FQLADDLLD E 
Sbjct: 181 RQLQSMKTGALLRYACRAGAILADAPEADIDRLTRFGEVIGLAFQLADDLLDVEA 235


>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
 gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
          Length = 303

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 81/240 (33%), Positives = 130/240 (54%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRS 55
           M  G+ +      +     I+ +LD+ L       +T     L  A+RY+LLGG K++R+
Sbjct: 6   MTDGVATDFLVWAKAKQGHIEIVLDEALPS-----ETTAPQVLHDAMRYSLLGGGKRVRA 60

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L    A L   N   A     A+E IH YSL+HDD+P MDN  +RRGKP+ H QYD+ T
Sbjct: 61  LLCYAAAELCATNATIADAAACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDAT 120

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFID 173
           A++ G+ L + AF+++S+P      N +  ++  L    G  GM GGQ +D+    + + 
Sbjct: 121 ALLVGDALQSLAFDVLSTPTLCESANQQISMLNILAKASGSLGMAGGQAIDLASVGKALS 180

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + ++  + K+KTGAL+  A   GA  +  +  +   +  + E++G+ FQ+ DD+LD E D
Sbjct: 181 QHELENMHKLKTGALIQAAALLGA--SSGTAEQMSAVIVYAEHIGLAFQVVDDILDVEAD 238


>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
 gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
          Length = 298

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 90/236 (38%), Positives = 139/236 (58%), Gaps = 12/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            + + L +  +R++  L  L+L+ A         + + ++RY+L  GGK+IR  L    A
Sbjct: 2   EIATYLNDQRQRVEDQLAALMLKPAGDFS-----QHIESMRYSLFVGGKRIRPILCLAGA 56

Query: 63  SLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +        AL V  A+ECIH YSLIHDDLP+MD+  +RRGKPT H  + E  AI+A
Sbjct: 57  EAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMDDDDLRRGKPTNHTVFGEAAAILA 116

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLT+AF+++SS     + D  R +++ ++    G  GM+GGQ LD+  E   +    
Sbjct: 117 GDGLLTFAFDLLSSQASADINDAARIRIIQTIARAAGPLGMVGGQSLDMIYEGQQVGYEM 176

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I + KTGAL+  +  SGA++A AS  ++  L+ +G+N+G+ FQ+ DDLLD E 
Sbjct: 177 LRTIHRSKTGALITASVLSGAMVAGASAEQETALKTYGDNIGLAFQIVDDLLDVEA 232


>gi|189024858|ref|YP_001935626.1| polyprenyl synthetase [Brucella abortus S19]
 gi|189020430|gb|ACD73152.1| Polyprenyl synthetase [Brucella abortus S19]
          Length = 288

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 112/224 (50%), Positives = 150/224 (66%), Gaps = 3/224 (1%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73
            ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A+LF       L
Sbjct: 2   EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQYGQAVL 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           RV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+II+S
Sbjct: 62  RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHKAFDEAAAILAGDSLLTYAFDIIAS 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCF 191
            +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ F
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ACE+GAI+A ASQ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 182 ACEAGAIIAGASQEDRERMAEFGSAIGLAFQLADDLLDVTADAG 225


>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
 gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
          Length = 361

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + ++E +  ++  LD      A+         L  A+RYALL GGK++R  L    
Sbjct: 59  FNFKAYMEERAVAVNRALD------AAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAA 112

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            ++       A+   AA+E +H  SL+HDDLP MD+  +RRGKPT H+ Y E  A++AG+
Sbjct: 113 CAVVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 172

Query: 122 GLLTYAFEIISSPKTQLK-------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DE 170
            LL+ +F  ++S  +               + +  L   IG +G++ GQ++D++     +
Sbjct: 173 ALLSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQ 232

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    +  I   KT AL+  +   GAI+   +  + E LR +  ++G++FQ+ DD+LD 
Sbjct: 233 TVPLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDV 292

Query: 231 E---EDLPK 236
               E+L K
Sbjct: 293 TKSSEELGK 301


>gi|227544389|ref|ZP_03974438.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
 gi|300909750|ref|ZP_07127211.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
 gi|227185652|gb|EEI65723.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
 gi|300893615|gb|EFK86974.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
          Length = 290

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 86/224 (38%), Positives = 128/224 (57%), Gaps = 11/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGA 77
           ++D L ++ +    Q    L S++ Y+L+ GGK++R  L      +     +   LR  +
Sbjct: 12  IEDYLSKSLATDIDQA--TLESSMSYSLMAGGKRLRPALTLTTIEMLGGTLNDDLLRAAS 69

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H YSLIHDDLP+MDN  +RRGKPT H ++    A +AG+GLLT AF+ ++     
Sbjct: 70  ALELLHTYSLIHDDLPAMDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVAD--NH 127

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACES 195
           L  N+RSQL L L    G  GM+ GQ  DI+ E   ++  Q+  + + KTG L+ +A  +
Sbjct: 128 LPANVRSQLTLELAKAAGPSGMVAGQARDIEGEHQHLNLNQLKYLHRQKTGELIRYAVLA 187

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           G IM   S   K+ L  FGEN G+ FQ+ DDL+D     E++ K
Sbjct: 188 GGIMMDQSAEIKQELAAFGENYGLAFQIYDDLMDVLSTTEEMGK 231


>gi|332531501|ref|ZP_08407403.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
 gi|332039053|gb|EGI75477.1| farnesyl-diphosphate synthase [Hylemonella gracilis ATCC 19624]
          Length = 313

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 130/237 (54%), Gaps = 9/237 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTEC 61
            + + + E   R++  L + +       + +H D +L  A+RYA+L GGK++R  LV   
Sbjct: 8   SMRAWMDERLTRVEHALQEWVGVD----EPEHLDVVLGLAMRYAVLDGGKRLRPLLVLAA 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                     ALR   A E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ E  A++AG+
Sbjct: 64  CEAVRGEADAALRAACATELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGD 123

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L   AFE+++   +  +   ++++L   L    G  GM GGQ +D+      +DE ++ 
Sbjct: 124 ALQALAFELLTPDDEVAVPVGMQARLCRLLARAAGSSGMAGGQAIDLASVGVKLDEERLR 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + ++KTGAL+  +   GA   H +Q ++  L  +G  +G+ FQ+ DD+LD   D  
Sbjct: 184 QMHRLKTGALLQASVMMGAACGHPTQAQQAALSDYGAAIGLAFQVVDDILDVTADSA 240


>gi|294054659|ref|YP_003548317.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 294

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 128/235 (54%), Gaps = 10/235 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     +KL +  +R++T +D LL    +H       RL  A+RY++  GGK++R  LV 
Sbjct: 1   MEASFKAKLSQYQQRVETGIDTLLPSEDTH-----PVRLHRAMRYSMEAGGKRLRPVLVL 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             + L + +    +    AIEC+H Y+LIHDDLPS+DN  +RRG+P+ H Q+DE TA++A
Sbjct: 56  ALSELAD-SGQDPIAAAVAIECLHTYTLIHDDLPSLDNSDLRRGRPSCHKQFDEPTAVLA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT+AFE++S         +   L+  L    G + ++GGQ  DI +E   +D   +
Sbjct: 115 GDALLTFAFELLSREYAS-SPELAVGLIQDLADASGSRRLIGGQQEDIDNEGKPVDADTL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I + KT AL+  A   G           + ++  G +LG+ FQ+ DD+LD   
Sbjct: 174 QYIHENKTAALLTAALSMGLRFTQPGAQALQLIQKVGFHLGMTFQIVDDILDATS 228


>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
 gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
 gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
 gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
          Length = 295

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 84/239 (35%), Positives = 140/239 (58%), Gaps = 15/239 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +    +E++  I+ +++  + +  S      + RL  +++Y++  GGK+IR  L+    +
Sbjct: 1   MKEFTKEHAPLIEEVMERFVKEHTS------DRRLFESMQYSIQAGGKRIRPLLLAATVA 54

Query: 64  LFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+    TA+ +  AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+G
Sbjct: 55  AFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDG 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLT AF++++    +++ N +  L+  L+   G QGM+ GQ  DIQ E   +   ++  I
Sbjct: 115 LLTAAFQLVAMA--EIEANQKVLLLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSI 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            + KTG L+ FA  +G ++A  ++     L  F +++G+ FQ+ DDLLD     E+L K
Sbjct: 173 HERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGK 231


>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
           thaliana]
          Length = 360

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 80/244 (32%), Positives = 123/244 (50%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   ++ ++  LD         +  +    +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKLYMIRKAESVNAALD-------VSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAV 116

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L    R  + ++ L   IG  G++ GQM+D+  E ++       
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            +  I   KT AL+  A   G IM   ++ E E+LR +   +G++FQ+ DD+ D     E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKSTE 296

Query: 233 DLPK 236
           +L K
Sbjct: 297 ELGK 300


>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 360

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +   ++ +   L+         +  Q    +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKSYMIRKAESVSMALN-------VSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAA 116

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MD+  +RRGKPT H  + E  A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGD 176

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L    R  + +  L   IG +G++ GQ+ D+  + ++       
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLE 236

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
           ++  I   KT AL+  A   GAI+   ++ E ++LR +G  +G++FQ+ DD++D     E
Sbjct: 237 RLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTE 296

Query: 233 DLPK 236
           +L K
Sbjct: 297 ELGK 300


>gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
 gi|212673609|gb|EEB34092.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
          Length = 298

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 12/238 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
              + S L+E  K +++ L   L         +   RL  ++ Y+L  GGK++R  L   
Sbjct: 5   TEAMKSLLKERGKLVESYLATCLD------GQEMPPRLRESMLYSLQAGGKRLRPVLCLS 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           CA+L  +     L   +AIE +H YSLIHDDLP+MD+  +RRGKP+ H  +DE TAI+AG
Sbjct: 59  CAALCGLKAEDVLPFASAIEMVHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQV 177
           + LLT AF  +   + +L      + M       G  GM+GGQ  D+    +      ++
Sbjct: 119 DALLTDAFAHM--CRVELPAGQVLRAMAEFARAAGSSGMVGGQEWDMLYTGLPPVSMAEL 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +  MKTGAL+  +C  GA++A A+ +  ER+  +G  LG+ FQ+ADD+LD   D  
Sbjct: 177 RRMHAMKTGALLRASCVCGALLAGAADDVCERIGRYGAALGVAFQIADDILDVVSDTA 234


>gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
          Length = 311

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 85/229 (37%), Positives = 124/229 (54%), Gaps = 10/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFN 66
           +    + +  ++DD L   A+H+    +  LL  ++ Y+LL GGK++R  L    A L  
Sbjct: 1   MARQLQELVAVVDDYL---ATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLG 57

Query: 67  VN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  +R   A+E IH YSLIHDDLP+MDN  +RRGKPT H  Y    A +AG+GLLT
Sbjct: 58  KTIDDDLVRAACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLT 117

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183
            AFE +S    QLK  +R +L+  L    G  GM+ GQ  D+    + +   Q+  + + 
Sbjct: 118 LAFEWVSD--NQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQ 175

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTGAL+ +A  +G ++A       + L  FGE  G+ FQ+ DD+LD   
Sbjct: 176 KTGALLRYAVLAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDVTA 224


>gi|323137013|ref|ZP_08072093.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
 gi|322397774|gb|EFY00296.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
          Length = 310

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 108/243 (44%), Positives = 152/243 (62%), Gaps = 8/243 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
                +L + ++  +  LD LL       +     RLL A+RY +L GGK++R FLV E 
Sbjct: 8   EEFRRRLDQAAEATEAALDSLLAPAPLADEITRPARLLEAMRYVSLGGGKRLRPFLVIES 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A LF V   +ALR   A+E IHCYSL HDDLP+MD+  +RRG+PT H  +DE TAI+AG+
Sbjct: 68  ARLFGVEGASALRTACALEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQV 177
           GLLTYAF++++ P T    ++R  L+L+L    GL GM+GGQ LD+  E     + + + 
Sbjct: 128 GLLTYAFDVVADPATHPDASLRVSLVLALARAAGLGGMVGGQALDLAAETAATPLSQAET 187

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
             +Q MKTGAL+ FA ++G I+  A+  +K+ LR +GE LG  FQ+ADD+LD E D   L
Sbjct: 188 MQMQAMKTGALLRFAVDAGGILGGAAPAQKKALRRYGEALGAAFQIADDILDAEGDTAAL 247

Query: 235 PKK 237
            K+
Sbjct: 248 GKR 250


>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
 gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
          Length = 304

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSK----RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
           M    P++L   S+    R++  L          +  +    L  A+RYA+L GGK++R 
Sbjct: 6   MTDWTPARLAGWSEPHLMRVEAALSR-------WVGVEAPVLLGDAMRYAVLDGGKRLRP 58

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            LV   +     N   ALR   A E IH YSL+HDDLP MDN  +RRGKPTVH+++ E  
Sbjct: 59  LLVLAASEAVGGNEAAALRAACAAELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEAD 118

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--D 173
           A++AG+ L   AFE+++    ++    ++ L   L    G QGM GGQ +D+    I  +
Sbjct: 119 ALLAGDALQALAFELLAPEGDEIPAATQATLCRLLARAAGSQGMAGGQAIDLASVGIALN 178

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ETQ+  + ++KTGAL+  + E GA   + S      LR +G  +G+ FQ+ DD+LD   D
Sbjct: 179 ETQLREMHRLKTGALLQGSVEMGAACGNVSAAALAALRDYGAAIGLAFQVVDDILDVTAD 238


>gi|294782565|ref|ZP_06747891.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
 gi|294481206|gb|EFG28981.1| dimethylallyl transferase [Fusobacterium sp. 1_1_41FAA]
          Length = 298

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 125/243 (51%), Gaps = 13/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN      L+E +                  +  + + +   + YALL GGK++R FL+ 
Sbjct: 1   MNSDFKVYLKEKTNFF------ETELKKELEELSYPETIAKGMEYALLNGGKRLRPFLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N +    ++    +E IH YSL+HDDLP++DN   RRGK T H  + E  AI+ 
Sbjct: 55  TTLELLNQDIQKGVKSAIGVEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S     +    +   ++S T    G+ GM+GGQM+DI+ E   I+   
Sbjct: 115 GDALLTYAFYMLSEKNLNILSFEQITNIISKTSAYSGINGMIGGQMIDIESENKKINLET 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I K KTG L+    E   I+A  S++++  L  + E +G+ FQ+ DD+LD E    D
Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIADVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFED 234

Query: 234 LPK 236
           L K
Sbjct: 235 LGK 237


>gi|20089495|ref|NP_615570.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanosarcina acetivorans C2A]
 gi|19914402|gb|AAM04050.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanosarcina acetivorans C2A]
          Length = 324

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 17/236 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L  ++++ S  +D  +++LL          H + L  A RY +  GGK++R  ++ 
Sbjct: 2   MLMMLIDEIKKRSSHVDAAINELL-------PVTHPEELYKASRYLVDAGGKRLRPAVLI 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +  + L    A+E +H ++LIHDD+  MD   IRRG P VH+++ E  AI+A
Sbjct: 55  LAAEAVGSDLKSVLPAAVAVELVHNFTLIHDDI--MDKDNIRRGMPAVHVKWGEAGAILA 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQ 176
           G+ L + AFEI+S  +      ++   +LS T       +  GQ LD+  E    + E +
Sbjct: 113 GDTLYSKAFEILSKVENDPVRILKCMDVLSKT----CTEICEGQWLDMDFEKRDRVTELE 168

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              + + KT  L   A + GA++  AS    E L  +G  +GI FQ+ DD+LD   
Sbjct: 169 YLEMVEKKTSVLYAAAAKIGALLGGASDEVAESLSEYGRLIGIGFQMYDDVLDMVA 224


>gi|90410905|ref|ZP_01218919.1| putative geranyltranstransferase [Photobacterium profundum 3TCK]
 gi|90328118|gb|EAS44429.1| putative geranyltranstransferase [Photobacterium profundum 3TCK]
          Length = 300

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 86/239 (35%), Positives = 119/239 (49%), Gaps = 10/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           N  L   L+    R +  L   L       Q   +  L+  ++Y  LLGGK+ R FL   
Sbjct: 4   NLTLSQSLKHYQDRSNQHLAQWL-----EAQPFADQALVKTMKYGTLLGGKRARPFLTYI 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +            AA+ECIH YSLIHDDLP+MD+  +RRG PT HI +DE  AI+AG
Sbjct: 59  TGQMLGAECADLDTPAAAVECIHAYSLIHDDLPAMDDDELRRGHPTCHIAFDEALAILAG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           + L T AFEI++  +     N  R  ++  L    G  GM  GQ LD++ E   +D  ++
Sbjct: 119 DALQTLAFEILADGQLSDDGNTQRIAMIKELAQASGAAGMCVGQALDLEAEGKRVDLQKL 178

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             I K KTGAL+  A   GA+ A         +L  F + +G+ FQ+ DD+LD   D  
Sbjct: 179 EAIHKHKTGALIRCAVRLGALAAGQKGVAVLPQLNQFADAIGLAFQVQDDILDVTSDTE 237


>gi|218264432|ref|ZP_03478283.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222005|gb|EEC94655.1| hypothetical protein PRABACTJOHN_03979 [Parabacteroides johnsonii
           DSM 18315]
          Length = 324

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 12/224 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
            + IL  +  +      T     L   I Y L LGGK+IR  LV    +L+  N   A++
Sbjct: 4   FNDILQKIEQEITRLQFTYPPKSLYEPIEYILSLGGKRIRPALVLMACNLYKENVDIAIK 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E  H ++L+HDDL  MD    RR KPTVH  +++ TAI++G+ +L  A+++I   
Sbjct: 64  PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNDNTAILSGDAMLIAAYQLIGET 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
           K++    I      +         + GGQ  D++ E    + E +   + ++KT  L+  
Sbjct: 122 KSESLKEILDLFTRT------ALEICGGQQYDMEFESRTDVTEAEYIEMIRLKTAVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A + GAIM +A + + E L  FG N+G+ FQL DDLLD   D  
Sbjct: 176 ALKMGAIMGNAPEADAEALYQFGINIGLAFQLQDDLLDVYGDTA 219


>gi|1303919|dbj|BAA12575.1| YqiD [Bacillus subtilis]
          Length = 272

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L S L +  K I+  L      +    +    D L  ++ Y+L  GGK++R  +V 
Sbjct: 1   MTNKLTSFLADRKKTIENQL------SVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              + +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  + E TA++A
Sbjct: 55  AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114

Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
           G+GLLT +F++I+S  + ++    R +L+  L    G +GM+GGQ+ D++  +  +   +
Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAGNRQVTLEE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I + KT  L+ F   +GAI+A A + + E LR F  ++GI FQ+ DD+LD E    K
Sbjct: 175 LESIHERKTSKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234


>gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
 gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
          Length = 297

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 125/236 (52%), Gaps = 12/236 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L S L     R++ +L++ + +      +    +L  A+RY+LL GGK++R  L   
Sbjct: 3   TFQLNSFLAAQQARVEALLNERVARLG---PSGTPPQLAEAMRYSLLAGGKRLRPVLCLA 59

Query: 61  CASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            A L    +     A     A+E +H YSL+HDDLP+MDN   RRG+ T H  Y E  AI
Sbjct: 60  FADLVARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAI 119

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQ 176
           +AG+ LLT AF +++S      +++R+ L   L    G  GM+GGQ+LD  +D       
Sbjct: 120 LAGDALLTEAFTLVASG----PESMRAALCRELAVASGAAGMVGGQVLDTAEDRPSALDY 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  + +MKTGAL+  AC  G + +    +   R   +G+ +G+ FQ+ADD+LD   
Sbjct: 176 LIRMHRMKTGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLDVTA 231


>gi|15232010|ref|NP_189747.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75263903|sp|Q9LHR4|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
           chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
           AltName: Full=Dimethylallyltranstransferase 12; AltName:
           Full=Farnesyl diphosphate synthase 12; AltName:
           Full=Farnesyltranstransferase 12; AltName:
           Full=Geranyltranstransferase 12; Flags: Precursor
 gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
 gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
          Length = 360

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +   ++ +   L+         +  Q    +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKSYMIRKAESVSMALN-------VSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAA 116

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MD+  +RRGKPT H  + E  A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGD 176

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L    R  + +  L   IG +G++ GQ+ D+  + ++       
Sbjct: 177 ALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLE 236

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
           ++  I   KT AL+  A   GAI+   ++ E ++LR +G  +G++FQ+ DD++D     E
Sbjct: 237 RLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTE 296

Query: 233 DLPK 236
           +L K
Sbjct: 297 ELGK 300


>gi|157376460|ref|YP_001475060.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3]
 gi|157318834|gb|ABV37932.1| polyprenyl synthetase [Shewanella sediminis HAW-EB3]
          Length = 293

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 89/238 (37%), Positives = 135/238 (56%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   + +  +R+D  +  ++   A+      + +L +A+++ AL+GGK+IR FLV     
Sbjct: 2   LARAISQYQQRVDEQIKSIIDSQAT-----TDLKLQAAMKHGALIGGKRIRPFLVYAIGD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + NV         AAIEC+H YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MLNVAPEKLDACAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
              AFE I  P   +  +    ++ +L    G  GM GGQ +D+   D+ ID   +  + 
Sbjct: 117 QALAFESICEPINGITPSQNLAMVRALAKASGYSGMCGGQAMDLNATDKQIDLATLTKLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           ++KTGAL+  A E   I A  +  E+  L  F + +G+ FQ+ DD+LD     E+L K
Sbjct: 177 RLKTGALIRCAVELPMIAAAVTVEEQNLLMDFADAIGLAFQVQDDVLDIIASTEELGK 234


>gi|295099642|emb|CBK88731.1| Geranylgeranyl pyrophosphate synthase [Eubacterium cylindroides
           T2-87]
          Length = 282

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 124/232 (53%), Gaps = 17/232 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
            S   +T L + +L+           R   A+ Y+L+ GGK++R  L+      + ++  
Sbjct: 3   QSNEFETYLKETVLEKL-------PSRTKEAMCYSLMNGGKRVRPQLLFAALQHYGMDPK 55

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                  AIE IH YSLIHDDLP+MDN   RRGKP+ H  YDE  AI+AG+GLLT AFE+
Sbjct: 56  DGFACACAIEMIHTYSLIHDDLPAMDNDDFRRGKPSCHKAYDEACAILAGDGLLTKAFEV 115

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGA 187
           +   +T   D  + +L+ +L+   G+ GM+ GQ LDIQ   D       +  I + KT  
Sbjct: 116 V--LRTPCSDTNKVKLVEALSSYSGIDGMIYGQELDIQSENDPHATLDTLLKIDEYKTAK 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           L+       AI+A+    + E ++  G +LG+ FQ+ DD+LD     E+L K
Sbjct: 174 LLTLPLVCAAIIAN-KHEDIEIMKKIGYDLGVQFQIQDDILDVTKTSEELGK 224


>gi|15231877|ref|NP_188071.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75274215|sp|Q9LUE1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
           chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
           AltName: Full=Dimethylallyltranstransferase 9; AltName:
           Full=Farnesyl diphosphate synthase 9; AltName:
           Full=Farnesyltranstransferase 9; AltName:
           Full=Geranyltranstransferase 9; Flags: Precursor
 gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
 gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
          Length = 360

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 +   ++ ++  LD         +       +  A+RY+LL GGK++R  L    
Sbjct: 64  FDFKLYMIRKAESVNAALD-------VSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAA 116

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+
Sbjct: 117 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGD 176

Query: 122 GLLTYAFEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++   + L       + ++ L   IG  G++ GQM+D+  E ++       
Sbjct: 177 ALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLE 236

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            +  I   KT AL+  A   G IM   ++ E E+LR +   +G++FQ+ DD+LD     E
Sbjct: 237 HLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTE 296

Query: 233 DLPK 236
           +L K
Sbjct: 297 ELGK 300


>gi|225432262|ref|XP_002275812.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 361

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 16/244 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +    + + E +K ++  LD       + +  +    +  A+RY+LL GGK+I   +   
Sbjct: 65  DFNFKAYMLEKAKSVNQALD-------TAIPLREPLEIHKAMRYSLLDGGKRIHPIVCIS 117

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L      TA+ V  A+E +H  SL+ DDLP MDN  IRRGKP+ H  + E   I+A 
Sbjct: 118 ACELVGGQESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESVTILAV 177

Query: 121 NGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---T 175
           + LL  AFE +++  T   +   +    +  L  +IG QG++ GQ LD+  E   E    
Sbjct: 178 DALLALAFEHVATMSTVGVVPPMVTVHAIQELARSIGSQGLVAGQFLDLSSEGSPEIGLE 237

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EE 232
            +  I   K G L+  +   GA++   S  + E LR FG  +G+++Q+ DD+LD     +
Sbjct: 238 GLESIHINKAGPLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQ 297

Query: 233 DLPK 236
           +L K
Sbjct: 298 ELGK 301


>gi|224476632|ref|YP_002634238.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222421239|emb|CAL28053.1| geranyltranstransferase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 292

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 86/221 (38%), Positives = 124/221 (56%), Gaps = 8/221 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVG 76
           +++LLLQ+        N  L  ++RY+L  GGK+IR  L+ E   +   N ++   L+  
Sbjct: 9   INELLLQSIPLSPLDTN--LEESMRYSLEAGGKRIRPLLLIETLKMLSNNSDYSKGLQTA 66

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E +H YSLIHDDLP+MDN   RRGK T H  Y E  A++AG+ LLT AF +IS+  +
Sbjct: 67  LALEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKALLAGDALLTKAFHLIST-DS 125

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L    R +L+  L+   G  GM+GGQ LD++ E   I    +  I K KTGAL+ +A  
Sbjct: 126 LLDAEARIKLVEGLSDASGHLGMIGGQTLDMESENKQIPLETLQQIHKEKTGALLTYAIM 185

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   +        + L  + E+LG+IFQ+ DDLLD   D  
Sbjct: 186 AAVTIVKPPNEISDILNNYSEHLGLIFQIKDDLLDVYGDEK 226


>gi|292898693|ref|YP_003538062.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
 gi|291198541|emb|CBJ45649.1| geranyltranstransferase [Erwinia amylovora ATCC 49946]
 gi|312171554|emb|CBX79812.1| geranyltranstransferase [Erwinia amylovora ATCC BAA-2158]
          Length = 299

 Score =  211 bits (537), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 10/227 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72
           +R++  L   + Q         +  L++A+ Y ALLGGK++R FLV     +   +    
Sbjct: 12  QRVNAALQGFISQL-----PFQSSPLVNAMEYGALLGGKRLRPFLVYATGDMLRADDAAL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AAIECIH YSLIHDDLP+MDN  +RRG+PT HI++ E +AI+AG+ L T AF I++
Sbjct: 67  DAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEESAILAGDALQTLAFSILA 126

Query: 133 S-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
             P   +    R  ++  L    G+ GM GGQ LD+  E   +   ++  I + KTGAL+
Sbjct: 127 DAPMPGVMAESRIAMLSELAQASGVAGMCGGQALDLAAEGKKVTLNELEQIHRHKTGALI 186

Query: 190 CFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             A   GA+ A  S       L  F   +G+ FQ+ DD+LD   D  
Sbjct: 187 RSAVRLGALTAGESGRAALPALDRFANAIGLAFQVQDDILDVTGDTE 233


>gi|15837263|ref|NP_297951.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
           fastidiosa 9a5c]
 gi|9105539|gb|AAF83471.1|AE003910_7 geranyltranstransferase (farnesyl-diphosphate synthase) [Xylella
           fastidiosa 9a5c]
          Length = 291

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 89/235 (37%), Positives = 130/235 (55%), Gaps = 13/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           M+  L ++     +R D+ L+  L      + TQ   RL +A+RY +L  GK+IR  LV 
Sbjct: 1   MSEALFTR---WRQRTDSYLERTL-----SIPTQAPQRLHAAMRYTVLSRGKRIRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF+V+        AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ 
Sbjct: 53  AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
           G+ L T AFE ++   +    ++R   + +LTH  G+ GM GGQ +DI      +T   +
Sbjct: 113 GDALQTLAFECLADAPSD--TSLRIAWLQTLTHAAGVAGMCGGQAIDIDATGQSQTLKAL 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  +K+G LM  A   GA+    S  +   L  F   LG+ FQ+ DD+LD E 
Sbjct: 171 EAMHALKSGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIES 225


>gi|150010302|ref|YP_001305045.1| putative isoprenoid biosynthesis related protein [Parabacteroides
           distasonis ATCC 8503]
 gi|255012432|ref|ZP_05284558.1| putative isoprenoid biosynthesis related protein [Bacteroides sp.
           2_1_7]
 gi|298374699|ref|ZP_06984657.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
 gi|149938726|gb|ABR45423.1| putative isoprenoid biosynthesis related protein [Parabacteroides
           distasonis ATCC 8503]
 gi|298269067|gb|EFI10722.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
          Length = 324

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 12/224 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
            + IL  +  + +    T     L   I Y L LGGK+IR  L     +++N +   A++
Sbjct: 4   FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E  H ++L+HDDL  MD    RR KPTVH  ++  TAI++G+ +L  A+++I S 
Sbjct: 64  PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGST 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
           +      +      +         + GGQ  D++ E    + E +   + ++KT  L+  
Sbjct: 122 EHGHLKQVLDLFTQTAAE------ICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + ++GA++  ASQ +   L  FG N+G+ FQL DDLLD   D  
Sbjct: 176 SLKTGALLGGASQEDAGNLYAFGINIGLAFQLQDDLLDVYGDTA 219


>gi|325265404|ref|ZP_08132128.1| geranyltranstransferase [Clostridium sp. D5]
 gi|324029405|gb|EGB90696.1| geranyltranstransferase [Clostridium sp. D5]
          Length = 296

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 15/244 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN       Q   + I+ IL   L          +   ++ A+ YAL+ GGK++R  L+ 
Sbjct: 1   MN--FKETYQTKVEAIERILKAYLPAGEG-----YQTVIMEAMEYALMAGGKRLRPMLMQ 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   LF           AAIE IH YSL+HDDLP+MDN   RRG+ T H+ Y E   I+ 
Sbjct: 54  ETYRLFGGCGTRIEPFMAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVMYGEDIGILT 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           G+ LL  AFE  +       +      + +  L    G+ GM+GGQ++D++     I   
Sbjct: 114 GDALLNCAFETAAKAFDMEPEKSLQTGKALQILAGKAGIYGMIGGQVVDVKSTGDQISGE 173

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
           ++  I K+KTGAL+  +   GA++A A++ +   +      +G+ FQ+ DD+LD     E
Sbjct: 174 KLNFIYKLKTGALIEASMMIGAVLAGAAREQVNAVEEIAGKVGLAFQIQDDILDVTSTAE 233

Query: 233 DLPK 236
           +L K
Sbjct: 234 ELGK 237


>gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2]
 gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2]
          Length = 303

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 10/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
                L   +  + + L +              D L  ++ Y+L  GGK++R  LV   A
Sbjct: 8   SFKEYLAVTADAVSSALTEQFP-----AHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAA 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F  +   AL V  A+E +H YSLIHDDLP+MD+   RRGK T H  Y E  A++AG+ 
Sbjct: 63  EAFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDA 122

Query: 123 LLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178
           LLT+AF  I        +  +    ++  L+   G +GM+GGQ+ D+  E       ++ 
Sbjct: 123 LLTHAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELE 182

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I   KT  L+ F+  +G  +A A +++ E LRCFG +LG+ FQ+ DD+LD   D  K
Sbjct: 183 YIHLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESK 240


>gi|288802129|ref|ZP_06407570.1| polyprenyl synthetase [Prevotella melaninogenica D18]
 gi|302346894|ref|YP_003815192.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
 gi|288335564|gb|EFC73998.1| polyprenyl synthetase [Prevotella melaninogenica D18]
 gi|302150740|gb|ADK97001.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
          Length = 324

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 15/228 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           + IL  +     +    +    L   I+Y L LGGK+IR  L+    +LF  +  T L  
Sbjct: 5   NEILSKVNEYINNLTYDRKPQSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKDDPETILSP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MD+  +RRG+ TVH+++D  TAI++G+ +L  AFE ++   
Sbjct: 65  ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMAQCD 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192
           ++    +           +    +  GQ  D++ E  +   E +   + ++KT  L+  A
Sbjct: 123 SRHLSEVL------RLFTVTALEIGEGQQYDMEFENRNDVKEEEYIEMIRLKTSVLLACA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            + GAI+A A   + E L  FGE +G+ FQL DD LD   D     KK
Sbjct: 177 MKIGAILADAPAEDVENLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 224


>gi|15228704|ref|NP_189589.1| geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase,
           putative / farnesyltranstransferase, putative
           [Arabidopsis thaliana]
 gi|75335025|sp|Q9LIA0|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
           chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
           AltName: Full=Dimethylallyltranstransferase 11; AltName:
           Full=Farnesyl diphosphate synthase 11; AltName:
           Full=Farnesyltranstransferase 11; AltName:
           Full=Geranyltranstransferase 11; Flags: Precursor
 gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
 gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
           thaliana]
 gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
          Length = 357

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S +   ++ +   L+         +  Q    +  A+RY+LL GGK++R  L    
Sbjct: 61  FDFKSYMIRKAESVSAALN-------VSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAA 113

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +  TA+    A+E IH  SLIHDDLP MD+  +RRGKPT H ++ E  A++AG+
Sbjct: 114 CELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGD 173

Query: 122 GLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ET 175
            LL  AFE ++     L    R  + ++ L   IG +G++ GQ+ D+  + ++       
Sbjct: 174 ALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLE 233

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--- 232
           ++  I   KT AL+  A   GAIM   ++ E E+LR +   +G++FQ+ DD+LD  E   
Sbjct: 234 RLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTK 293

Query: 233 DLPK 236
           +L K
Sbjct: 294 ELGK 297


>gi|169350498|ref|ZP_02867436.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552]
 gi|169292818|gb|EDS74951.1| hypothetical protein CLOSPI_01266 [Clostridium spiroforme DSM 1552]
          Length = 282

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 7/218 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
            I+ ++  +         + ++  A++Y+LL GGK+IR  L+      + +N+   L   
Sbjct: 3   QIIQEINTRLIKITDCFQDSKVKDAMKYSLLAGGKRIRPLLMLRIIQSYGLNYHDYLDAA 62

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE IH YSLIHDDLP MDN  +RRGKPT H Q+DE TAI+AG+GLL  A  +I     
Sbjct: 63  CAIEMIHTYSLIHDDLPGMDNDDLRRGKPTCHRQFDEATAILAGDGLLNEAANVILKANY 122

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACE 194
             +  I    +L      G+ GM+ GQ LD   +++  +  ++ +I   KTG L+  + +
Sbjct: 123 NSELKIALLSIL--YQASGVNGMILGQALDIKFENKKANRKELDLIHHHKTGDLISASMQ 180

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            GA++A+   N+ E  +  G  +G+ FQ+ DD+LD   
Sbjct: 181 MGALVANV--NDLETFKEIGYKIGLAFQIQDDILDVVG 216


>gi|153810474|ref|ZP_01963142.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174]
 gi|149833653|gb|EDM88734.1| hypothetical protein RUMOBE_00855 [Ruminococcus obeum ATCC 29174]
          Length = 263

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 12/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
               +LQ+ +   + ++   L +     +T     +  A+ Y++  GGK++R  L+ E  
Sbjct: 6   NFKEELQQRTDYAEEVIRRWLPEERGFSKT-----MAQAMNYSMCAGGKRLRPILLLETL 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF  +   A    A IE IH +SLIHDDLP++DN   RRG+ T H  Y E   +++G  
Sbjct: 61  RLFGGDEKLAEPFMAGIEMIHTHSLIHDDLPAIDNDDYRRGRLTTHKVYGEAMGVLSGVT 120

Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179
           LL YA+E +        D  R  + +  +    G+ GMLGGQ +D++++     +  +  
Sbjct: 121 LLNYAYETMFRAFELTDDKDRVIRAVRIMAEKTGIYGMLGGQSVDVENDGKPLEKDLLDY 180

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I + KT AL+  +  +GA++A A + +   +     ++G+ FQ+ DD+LD      +L K
Sbjct: 181 IYEHKTSALIEASMMAGAVLAGADEEQTSMIEQAASDIGLAFQIQDDILDVTSTSQELGK 240


>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
 gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
          Length = 324

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 11/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
                +QE   R +  L   +   A          L  A+RYA+L GGK++R  LV   A
Sbjct: 32  DFSVWMQERLARTEDALSRWVGINA-------PAGLGEAMRYAVLDGGKRLRPLLVWAAA 84

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     LR G A+E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ E +A++AG+ 
Sbjct: 85  EAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 144

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L   AFE++      +  +++++L   L    G QGM GGQ +D+    + + E Q+  +
Sbjct: 145 LQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKHLSEAQLREM 204

Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            ++KTGAL+  +   GA   A         L  +G+ LG+ FQ+ DD+LD   D  
Sbjct: 205 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 260


>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
 gi|251757288|sp|P54383|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
          Length = 296

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 135/240 (56%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L S L +  K I+  L      +    +    D L  ++ Y+L  GGK++R  +V 
Sbjct: 1   MTNKLTSFLADRKKTIENQL------SVYTEKLDMPDSLKKSMLYSLQAGGKRLRPLIVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              + +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  + E TA++A
Sbjct: 55  AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114

Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLT +F++I+S  + ++    R +L+  L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I + KT  L+ F   +GAI+A A + + E LR F  ++GI FQ+ DD+LD E    K
Sbjct: 175 LESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234


>gi|68171692|ref|ZP_00545051.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88657808|ref|YP_507273.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67998884|gb|EAM85577.1| Polyprenyl synthetase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599265|gb|ABD44734.1| putative geranyltranstransferase [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 267

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 3/215 (1%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+ Q  S +   + D LL+++RY++   GK IR FLV   A +FNVN    L V AA+E 
Sbjct: 8   LVKQLESILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEI 67

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP +DN  IRRG+ + H +++E  AI+ G+ LLT AFEI+S+        
Sbjct: 68  IHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFEILSTIDE--SPF 125

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           IR  ++ +L   +G QGM+ GQ+LD +    D   +  I  +KT      ACE G I+ +
Sbjct: 126 IRCCMIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHVLKTAQFFSVACELGGILGN 185

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AS  E   L  +G NLG  FQ+ DD+ D  +D  K
Sbjct: 186 ASNIELNALANYGLNLGHAFQVKDDIADANQDKSK 220


>gi|262039631|ref|ZP_06012924.1| geranyltranstransferase [Leptotrichia goodfellowii F0264]
 gi|261746346|gb|EEY33892.1| geranyltranstransferase [Leptotrichia goodfellowii F0264]
          Length = 271

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 4/202 (1%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++ + L  A++YA++ GGK+IR  L+     LF   +     +  A+E IHCYSL+HDDL
Sbjct: 6   KYPEELSEAMKYAVMNGGKRIRPILMYMICDLFGKKYDKIEDMATALEFIHCYSLVHDDL 65

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P+MDN   RRGK T H++Y E TAI+ G+ LLT AF +I+  +    D  +++++  L+ 
Sbjct: 66  PAMDNDMYRRGKLTTHVKYGESTAILVGDVLLTEAFNVIAESEKT-DDTAKAKIIAKLSE 124

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G  GM+GGQ +DI+ E   +    +  I   KTG L+  A E   I     ++++E+L
Sbjct: 125 YAGFYGMIGGQFMDIKSEHTRVSYDTLKYIHANKTGKLITAAIELPLIALDIEESKREKL 184

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
             + E +G  FQ+ DD+LD E 
Sbjct: 185 VGYSELIGTAFQIKDDILDIEG 206


>gi|306839463|ref|ZP_07472271.1| geranyltranstransferase [Brucella sp. NF 2653]
 gi|306405408|gb|EFM61679.1| geranyltranstransferase [Brucella sp. NF 2653]
          Length = 288

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 111/224 (49%), Positives = 151/224 (67%), Gaps = 3/224 (1%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTAL 73
            ++  L  LL +     +     RL++A+R+  L GGK++R FLV E A+LF  +    L
Sbjct: 2   EVEAALAGLLDERPRTGEIARPQRLIAAMRHGVLNGGKRLRPFLVLESAALFGQHGQAVL 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           RV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+II+S
Sbjct: 62  RVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIAS 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCF 191
            +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ F
Sbjct: 122 DETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIRF 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ACE+GAI+A AS+ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 182 ACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 225


>gi|28199392|ref|NP_779706.1| farnesyl-diphosphate synthase [Xylella fastidiosa Temecula1]
 gi|182682121|ref|YP_001830281.1| polyprenyl synthetase [Xylella fastidiosa M23]
 gi|28057498|gb|AAO29355.1| geranyltranstransferase [Xylella fastidiosa Temecula1]
 gi|182632231|gb|ACB93007.1| Polyprenyl synthetase [Xylella fastidiosa M23]
 gi|307578386|gb|ADN62355.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 291

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 13/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L ++     +R D+ L+  L      + TQ   RL +A+RY +L GGK+IR  LV 
Sbjct: 1   MSKALFTR---WCQRTDSYLERTL-----SIPTQAPQRLQAAMRYTVLSGGKRIRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF+V+        AA+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+ 
Sbjct: 53  AAGHLFHVDEPLLDVPAAAVELIHAYSLVHDDLPAMDDDLLRRGRPTVHIAFDEATAILT 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QV 177
           G+ L T AFE ++        ++R   + +LTH  G+ GM GGQ LDI      +T   +
Sbjct: 113 GDALQTLAFECLADA--PADTSLRIAWLQTLTHAAGVAGMCGGQALDIDATGQSQTLKAL 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  +K+G LM  A   GA+    S  +   L  F   LG+ FQ+ DD+LD E 
Sbjct: 171 EAMHALKSGTLMRAAVRMGALAGDPSAEDLHSLDTFAATLGLAFQVRDDILDIES 225


>gi|330814378|ref|YP_004358617.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327487473|gb|AEA81878.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 293

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 100/237 (42%), Positives = 138/237 (58%), Gaps = 10/237 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
               + ++  + + D  L     Q       + N+ L  A+ Y L  GGKKIRS+L    
Sbjct: 2   STFDTDIKLVADKTDQYLKSYFSQQ------KQNNELFEAMGYGLFAGGKKIRSYLTVAA 55

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LF++   TA+ V AAIEC+H YSLIHDDLPSMDN   RRGK + H ++ E TAI+AGN
Sbjct: 56  FDLFDIKEETAIAVAAAIECVHSYSLIHDDLPSMDNDDFRRGKESTHKKFGESTAILAGN 115

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
            LLT AFEI++S    L   ++S L+ +L    G  G+ GGQ LD+  E    DE  +  
Sbjct: 116 SLLTIAFEILTSNHLNLDKEVKSDLVFALASCSGHLGIAGGQFLDLSFEGKAQDEKTIIH 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +Q  KTG LM F  E+ AI+A  + N++E L+  G ++G++FQ+ADDLLD   D  K
Sbjct: 176 MQNKKTGELMGFCTEAAAIVAKKN-NDREELKKIGLDIGLLFQIADDLLDVYGDQNK 231


>gi|256839153|ref|ZP_05544663.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256740072|gb|EEU53396.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 324

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 12/224 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
            + IL  +  + +    T     L   I Y L LGGK+IR  L     +++N +   A++
Sbjct: 4   FENILQRIESEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E  H ++L+HDDL  MD    RR KPTVH  ++  TAI++G+ +L  A+++I S 
Sbjct: 64  PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGST 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
           +      +      +         + GGQ  D++ E    ++E +   + ++KT  L+  
Sbjct: 122 EHGHLKQVLDLFTQTAAE------ICGGQQFDMEFESRMDVNEEEYIEMIRLKTAVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + ++GA++  ASQ +   L  FG N+G+ FQL DDLLD   D  
Sbjct: 176 SLKTGALLGGASQEDAGNLYAFGINIGLAFQLQDDLLDVYGDTA 219


>gi|85373942|ref|YP_458004.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594]
 gi|84787025|gb|ABC63207.1| geranyltranstransferase [Erythrobacter litoralis HTCC2594]
          Length = 305

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 8/235 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L S L   ++ ID + D LL      +       L+ A+RY A+ GGK++R  LV   A 
Sbjct: 14  LSSALNRIARDIDAVFDVLLP-----VPDDTRAPLVEAMRYSAMDGGKRVRPLLVVATAE 68

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +  V+   ALRVG A+E IH YSLIHDDLP MD+  +RRGK T+H  YDE TA++AG+ L
Sbjct: 69  MLGVSRDPALRVGCAVEAIHVYSLIHDDLPCMDDDELRRGKATLHKAYDEATAVLAGDSL 128

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
              AFEI++  +T      +++L+ +L    G+ GM GGQM+D+  E    D   +  +Q
Sbjct: 129 HALAFEILTDDETTPDPFTQAELVRTLAAASGMAGMAGGQMMDMAAESADYDLHTITRLQ 188

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++KTGAL+  + E GAI+A   +  +  LR +  ++G+ FQ+ADDLLD E D  K
Sbjct: 189 QLKTGALLAASVEMGAILAKIPREGRSHLRAYARDIGLAFQIADDLLDAEGDEEK 243


>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
           23K]
          Length = 290

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/228 (33%), Positives = 117/228 (51%), Gaps = 6/228 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + +  +     L          +       L  ++ Y+++ GGK++R  L+         
Sbjct: 1   MADFKQLAARELPQFDAYLKRELAKIQEPTLQKSMTYSVMAGGKRLRPLLLFAVLESTGQ 60

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +   TA R   A+E IH YSLIHDDLP+MDN  +RRG+PT H  + E  AI+AG+GLLT 
Sbjct: 61  SIDETAFRAAGALELIHSYSLIHDDLPAMDNDDLRRGQPTNHKVFGEAEAILAGDGLLTL 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           AFE +++    +    R +L+  L    G  GM+ GQ+ DI+ E   +   Q+  +  +K
Sbjct: 121 AFEWLATLN--VTAEQRIELVRLLAQAAGANGMVAGQIEDIEGEHKTLTLAQLQQVHHLK 178

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           TG L+  A   GA++A   + E   LR F +  G+ FQ+ DD+LD   
Sbjct: 179 TGCLIEVAVAMGAVLAQLGEVETTALRGFAQQFGLAFQIQDDILDVTS 226


>gi|319937357|ref|ZP_08011764.1| geranyltranstransferase [Coprobacillus sp. 29_1]
 gi|319807723|gb|EFW04316.1| geranyltranstransferase [Coprobacillus sp. 29_1]
          Length = 282

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 126/235 (53%), Gaps = 17/235 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +++    I++ L++LL       +   N  +  A+ Y+LL  GK++R  L       + +
Sbjct: 1   MEQLRTEINSRLEELL-------EPLKNGPVKEAMSYSLLAPGKRLRPLLFLSVLRSYQI 53

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   + +  AIE IH YSLIHDDLP MDN  +RRG+PT H Q+DE TAI+AG+ LL   
Sbjct: 54  DYHIYMDIACAIEMIHTYSLIHDDLPGMDNDDLRRGRPTCHKQFDEATAILAGDALLNLG 113

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
              I      +  +++ +L+  L    G+ GM+ GQ  DI  E    +  Q+  I K KT
Sbjct: 114 VNTI--LNISIDSDLKVKLLNRLYEASGINGMIYGQQQDITFEKQLANLEQLKDIHKHKT 171

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           G L+  + + G+++A+ S  +       G +LG+ FQ+ DD+LD     E L KK
Sbjct: 172 GELIAVSMQLGSLIANPSDYQY--WTSIGFDLGLAFQIQDDILDVVGNTEQLGKK 224


>gi|217977003|ref|YP_002361150.1| Polyprenyl synthetase [Methylocella silvestris BL2]
 gi|217502379|gb|ACK49788.1| Polyprenyl synthetase [Methylocella silvestris BL2]
          Length = 309

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 105/242 (43%), Positives = 147/242 (60%), Gaps = 8/242 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L+  +  ++T+LD LL  +    +     RLL AIRY+ L GGK++R FL+ E A
Sbjct: 8   EFDKRLKTAADAVETMLDRLLGPSPLAGEIARPGRLLEAIRYSSLGGGKRLRPFLLIETA 67

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF V      R  AA+E IHCYSL+HDDLP++DN  +RRG+ T H  YDE TAI+ G+G
Sbjct: 68  RLFGVEGEGVTRAAAAVEMIHCYSLVHDDLPALDNDDLRRGRATTHKAYDEATAILVGDG 127

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVF 178
           LLTYAF++++ P T     IR++L+L+L    G  GM+GGQ+LD++ E          V 
Sbjct: 128 LLTYAFDVLADPATHADPAIRAELVLALARAAGFGGMIGGQVLDLEAEQSTAPHTAEAVI 187

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
            +Q MKTGAL+ F+  +GAI+  A    +  L  +G  LG  FQ+ADD+LD E D   L 
Sbjct: 188 RLQSMKTGALLHFSVLAGAIIGAADAKARAALSAYGHALGAAFQVADDILDVEADEATLG 247

Query: 236 KK 237
           K+
Sbjct: 248 KR 249


>gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
 gi|6225572|sp|O66952|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
          Length = 262

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 8/219 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTA 72
           +RI+T  + +  +    ++ +  + L+ A++Y  L  GK+IR       AS    N   A
Sbjct: 2   ERIETWKEKIEKRLNEILKPEGPEELIEAMKYYPLQKGKRIRPLFTVAVASALGGNEDDA 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + VG+ IE IH YSLIHDDLP MDN   RRG PT HI++ E  A++AG+ LLTY FE++S
Sbjct: 62  ITVGSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLS 121

Query: 133 SPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
             +    L      ++   +    G  GM+GGQ+LDI+        ++ +   KTGAL  
Sbjct: 122 QRENYKTLSCEEILEINKIIAQKAGSNGMVGGQVLDIKGY----EDLYEVSVKKTGALFE 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                GA++A   +  KE +   G  +G++FQ+ DD LD
Sbjct: 178 ACFMCGAVVAKRREKLKE-MESIGRKVGLLFQMVDDYLD 215


>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
 gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
          Length = 296

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 87/229 (37%), Positives = 131/229 (57%), Gaps = 7/229 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
            Q+N  ++   ++  +    + + T  +  L  A++Y  LLGGK+IR FLV     +   
Sbjct: 4   FQQNLCQVQHRINSFMENQFNDINTFGSP-LADAMKYGLLLGGKRIRPFLVYATGDMLGA 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AAIE IH YSLIHDDLP+MDN  +RRGKPT HI +D  TAI+AG+ L T+A
Sbjct: 63  DLNALDYAAAAIESIHAYSLIHDDLPAMDNDELRRGKPTCHIAFDHATAILAGDALQTFA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FEII+   T L    + +L+  L+   G++GM  GQ LD+  E   +   ++ +I + KT
Sbjct: 123 FEIITKS-TALCAEQKLKLVQELSRAAGVRGMCLGQSLDLLAEQKKVTLAELELIHRNKT 181

Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           GAL+  A   G I +  +A+     RL+ + + +G+ FQ+ DD+LD E 
Sbjct: 182 GALLTAALMMGFICSPHYANHALACRLKQYADAIGLAFQVRDDILDIEG 230


>gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
 gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
          Length = 295

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 129/235 (54%), Gaps = 9/235 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  L   L +  +  + +L++ L+         +N  L+ A+RY+LL GGK++R  LV 
Sbjct: 1   MSTELTHFLAKYREHTNGLLEERLIGLK-----HYNTDLIEAMRYSLLLGGKRVRPVLVY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A         A     AIE IH YSLIHDDLP+MD+  +RRG+PT HI Y E TAI+A
Sbjct: 56  AAAYATGGISAAADDCACAIEAIHTYSLIHDDLPAMDDDALRRGQPTCHIAYSEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ L   AFE +++ +  +  +   Q + +L    G  GM+ GQ +D    D+ +D   +
Sbjct: 116 GDALQCQAFEWLANSQ-HMPASAALQAIAALAKASGASGMVLGQAIDLAAVDKSVDLQHL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + + KTGAL+  + E GAI A A+  +  +LR +   +G+ FQ+ DD+LD   
Sbjct: 175 ETMHQHKTGALISASVEMGAIAAGATPTQTAQLRQYASAIGLAFQVQDDILDVTA 229


>gi|229825480|ref|ZP_04451549.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC
           49176]
 gi|229790043|gb|EEP26157.1| hypothetical protein GCWU000182_00840 [Abiotrophia defectiva ATCC
           49176]
          Length = 307

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/246 (33%), Positives = 127/246 (51%), Gaps = 15/246 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN     +L+  +   + ++ +   +       + +  L  A+ Y+LL GGK++R  ++ 
Sbjct: 1   MNNTFTDRLRLKTDEAEKLVAEYAPKLG-----EEDKLLEEAMNYSLLAGGKRLRPLIML 55

Query: 60  ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           E   LF       +    AA+E IH YSLIHDDLP+MDN  +RRG+PT H  Y E  AI+
Sbjct: 56  EIFRLFGGKKEGLVRPFAAALEMIHTYSLIHDDLPAMDNDDLRRGRPTNHKVYGEAVAIL 115

Query: 119 AGNGLLTYAFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---- 170
           AG+GLL  A E  S      +T  +     + +  L    G  GM+GGQ+LD+  E    
Sbjct: 116 AGDGLLNLAAETSSKAFRYCETICEYKRVGEALSRLFTYSGADGMIGGQILDMLSEEGKK 175

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              E     +  +KTG L+  A   GA++A A ++E + +   G ++G++FQL DD+LD 
Sbjct: 176 EKTEDFFLTMYDLKTGGLIKAAFVIGALLAGAGEDEIDIIEKVGASVGLVFQLQDDILDI 235

Query: 231 EEDLPK 236
             D  K
Sbjct: 236 SGDETK 241


>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 297

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 10/234 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
           G   + + E+   I+  L     +       Q  + L  A+ Y+L  GGK++R  L+   
Sbjct: 4   GDFDAFVIESKMFIEKELARYANEL------QCPNVLRDAMTYSLEAGGKRLRPLLLFAT 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
              F       +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+
Sbjct: 58  LHAFGKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGD 117

Query: 122 GLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178
           GLLTYAF+++S+     +   I+ +L L L    G +GM+ GQ+ D++ E   +   ++ 
Sbjct: 118 GLLTYAFQVVSAYNYEGISSEIKLRLALELAKAAGPEGMVAGQVADMEAEGKHLTLNELE 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I K KTG L+ FA  +GAI+A A++ E+E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 178 YIHKHKTGRLLEFAVLAGAILAGATKEEEEKLLAFAKYVGLAFQIRDDILDVEG 231


>gi|301308384|ref|ZP_07214338.1| polyprenyl synthetase [Bacteroides sp. 20_3]
 gi|300833854|gb|EFK64470.1| polyprenyl synthetase [Bacteroides sp. 20_3]
          Length = 324

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 12/224 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
            + IL  +  + +    T     L   I Y L LGGK+IR  L     +++N +   A++
Sbjct: 4   FENILQRIKSEISQLQFTNPPKSLYEPIEYILSLGGKRIRPALTLMACNIYNNSIENAIK 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E  H ++L+HDDL  MD    RR KPTVH  ++  TAI++G+ +L  A+++I S 
Sbjct: 64  PALGLEVFHNFTLLHDDL--MDEADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGST 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
           +      +      +         + GGQ  D++ E    + E +   + ++KT  L+  
Sbjct: 122 EHGHLKQVLDLFTQTAAE------ICGGQQFDMEFESRMDVSEEEYIEMIRLKTAVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A ++GA++  ASQ + + L  FG N+G+ FQL DDLLD   D  
Sbjct: 176 ALKTGALLGGASQKDADHLYAFGINIGLAFQLQDDLLDVYGDTA 219


>gi|302670346|ref|YP_003830306.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio
           proteoclasticus B316]
 gi|302394819|gb|ADL33724.1| geranylgeranyl pyrophosphate synthase IspA [Butyrivibrio
           proteoclasticus B316]
          Length = 313

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 25/252 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M      +L + +  I+ IL   L +   + +T     ++ A+ Y+LL GGK++R  ++ 
Sbjct: 1   MGNDFNKRLADKAAHIEDILKAFLPKEEGYART-----VIEAMNYSLLAGGKRLRPMMIL 55

Query: 60  ECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           E   LF   + +        AA+E IH YSL+HDDLP+MDN   RRG+ T H  Y    A
Sbjct: 56  EAYKLFAGNDADEKVVYPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHAVYGAGMA 115

Query: 117 IIAGNGLLTYAFEII---------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            +AG+GLL  A+E            S       N     +  L    G+ GM+GGQ  DI
Sbjct: 116 TLAGDGLLNLAYETAINGAMRGTTLSDYDGDNSNRYLAALDILAGKAGIYGMVGGQCADI 175

Query: 168 QDEFIDE-------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             E   E         +  I + KTGAL+  +   GA++  AS  +   +   G N+GI 
Sbjct: 176 CAENATEIPEDEMKDTLHYIDENKTGALIEASLMIGAVIGGASAQQVSMMEKIGSNVGIA 235

Query: 221 FQLADDLLDCEE 232
           FQ+ DD+LD   
Sbjct: 236 FQIQDDILDITS 247


>gi|312143726|ref|YP_003995172.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 294

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 93/237 (39%), Positives = 139/237 (58%), Gaps = 9/237 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
            G  + L+  +  ++  L++L+      +  +    L  A+RY LL GGK+IR  L    
Sbjct: 2   DGFKAILKSKAAELENSLEELMELKEDELAPE----LSEAMRYTLLSGGKRIRPILTLLT 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   ++  AL+ G+A+E IH YSLIHDDLP+MD+  +RRGK T H+ + E  AI+AG+
Sbjct: 58  TELLKGDYQAALKSGSALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLTYAFEI+S    +L+   + +++  +  N G+ GM+GGQ LDI  E   +   ++  
Sbjct: 118 ALLTYAFEILSEL--ELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQK 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTGAL+  +  SG   +  S+ EKE L+ + ENLG++FQ+ DDLLD   D  K
Sbjct: 176 IHAAKTGALIKASVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEK 232


>gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
 gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
          Length = 294

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 118/232 (50%), Gaps = 5/232 (2%)

Query: 3   GGLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
             LPS L E    ++  LD +L    A         RL  A+RYA+L GGK++R  L   
Sbjct: 5   FDLPSYLDECRAAVNAALDAVLAMPEAGQPGADDPGRLREAMRYAVLQGGKRMRPVLTIA 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                  +   AL    A+E IH YSL+HDDLP+MDN   RRGKPTVH+++    AI+ G
Sbjct: 65  ACQAAGGDTAHALPAACALEMIHAYSLVHDDLPAMDNDLERRGKPTVHVEFGHANAILVG 124

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + LLT AFE+++     +     +  +  L    G+ GM+GGQ LD+    +  D   + 
Sbjct: 125 DALLTDAFEVLARGTEGVPRANIADAVTILARCAGINGMVGGQALDLIAGQDIADLETLE 184

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLD 229
            +  +KTG L   A   G + +  A+     +L  +G   GI FQ ADD+LD
Sbjct: 185 RVHALKTGGLYAAAGALGGLSSPTAAPEAATQLERYGLAFGIAFQHADDVLD 236


>gi|262068286|ref|ZP_06027898.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
 gi|291378024|gb|EFE85542.1| geranyltranstransferase [Fusobacterium periodonticum ATCC 33693]
          Length = 298

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/243 (34%), Positives = 125/243 (51%), Gaps = 13/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN      L+E +                  +  + + +   + YALL GGK++R FL+ 
Sbjct: 1   MNSDFQVYLKEKTNFF------ETELKKELEELSYPETIAKGMEYALLNGGKRLRPFLLF 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L N +    ++    IE IH YSL+HDDLP++DN   RRGK T H  + E  AI+ 
Sbjct: 55  TTLELLNQDIQKGVKSAIGIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKVFGEAEAILI 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ LLTYAF ++S     L    +   ++S T    G+ GM+GGQM+DI+ E   I+   
Sbjct: 115 GDALLTYAFYMLSQKNLNLLSFEQITNIISKTSAYAGINGMIGGQMIDIESENKKINLET 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  I K KTG L+    E   I+A  S++++  L  + E +G+ FQ+ DD+LD E    +
Sbjct: 175 LKYIHKHKTGKLIKLPIEIACIIAGVSEDKRLVLEEYAELIGLAFQVKDDILDIEGTFEE 234

Query: 234 LPK 236
           L K
Sbjct: 235 LGK 237


>gi|154491788|ref|ZP_02031414.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC
           43184]
 gi|154088029|gb|EDN87074.1| hypothetical protein PARMER_01404 [Parabacteroides merdae ATCC
           43184]
          Length = 324

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 12/224 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
            + IL  +  +      T     L   I Y L LGGK+IR  LV    +L+  N  TA+ 
Sbjct: 4   FNDILQKIEQEITRLQFTYPPKSLYDPIEYILSLGGKRIRPALVLMACNLYKENVDTAVN 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E  H ++L+HDDL  MD+   RR KPTVH  ++  TAI++G+ +L  A+++I   
Sbjct: 64  PALGLEVFHNFTLLHDDL--MDDADKRRNKPTVHKVWNANTAILSGDAMLIAAYQLIGET 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
           +++    I      +         + GGQ  D++ E    + E +   + ++KT  L+  
Sbjct: 122 ESESLKEILDLFTRT------ALEICGGQQYDMEFESRTDVTEEEYIEMIRLKTAVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A + GAIM +A + + E L  FG N+G+ FQL DDLLD   D  
Sbjct: 176 ALKMGAIMGNAPKADAETLYQFGINIGLAFQLQDDLLDVYGDTA 219


>gi|20094211|ref|NP_614058.1| geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19]
 gi|19887236|gb|AAM01988.1| Geranylgeranyl pyrophosphate synthase [Methanopyrus kandleri AV19]
          Length = 324

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 22/238 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   +  +L    + +D  ++++L +          + L  A  + +  GGK+IR  L  
Sbjct: 1   MRSEILKELNRARELVDAKIEEVLPR-------GGPEDLYDACWHLIEAGGKRIRPLLAI 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           +   +   +    L    A+E IH ++LIHDD+  MD    RRG P VH+++    AI+A
Sbjct: 54  KSCLMLGGSEEDVLPEAVAVELIHTFTLIHDDI--MDEDDERRGVPAVHVKWGVPVAILA 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           G+ L + AFE+ +           ++             +  GQ +DI  E    + E +
Sbjct: 112 GDTLFSKAFEVAAEGGDVEAVKELAR---------ACTEICEGQAMDIGFENRTEVTEDE 162

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
              + + KT AL+  +C  G + A A++ + E LR +GENLGI FQ+ DD+LD   D 
Sbjct: 163 FLEMIRKKTAALIRTSCVVGGLKAGANREQLEALREYGENLGIAFQIQDDVLDLVGDE 220


>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
 gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
          Length = 313

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 11/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
                +QE   R +  L   +   A          L  A+RYA+L GGK++R  LV   A
Sbjct: 21  DFSVWMQERLARTEDALSRWVGINA-------PAGLGEAMRYAVLDGGKRLRPLLVWAAA 73

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     LR G A+E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ E +A++AG+ 
Sbjct: 74  EAVGGLAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDA 133

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L   AFE++      +  +++++L   L    G QGM GGQ +D+    + + E Q+  +
Sbjct: 134 LQALAFELLLPEDDGIPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREM 193

Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            ++KTGAL+  +   GA   A         L  +G+ LG+ FQ+ DD+LD   D  
Sbjct: 194 HRLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSA 249


>gi|302387567|ref|YP_003823389.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
 gi|302198195|gb|ADL05766.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
          Length = 298

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 9/235 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           N      L   +K +  +++  L     +  T     +L+A+ Y++  GGK++R  L+ E
Sbjct: 3   NMNFNDMLSARTKEVGLVVETYLPPVEGYQST-----VLAAMDYSVRAGGKRLRPMLMEE 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              LF  N        AA+E IH  SLIHDDLP MDN  +RRG PT  +++    A++AG
Sbjct: 58  TYRLFGGNGKEIEPFMAAMEMIHTSSLIHDDLPCMDNDTLRRGLPTAWVKFGYDMAVLAG 117

Query: 121 NGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177
           +GLL Y+ E  +       + ++ ++ M  L    G+ GM+GGQ +D++   + I + ++
Sbjct: 118 DGLLIYSMETAAKALSMTDRPDLVARCMGILAEKTGIHGMIGGQTVDVELAGKPIPKEKL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I ++KTGAL+  +   GA++  A + + + +      LG+ FQ+ DD+LD   
Sbjct: 178 HFIYRLKTGALLEASMMIGALLGGADERQLKLVENMASCLGMAFQIQDDILDLTS 232


>gi|296313727|ref|ZP_06863668.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768]
 gi|296839651|gb|EFH23589.1| geranyltranstransferase [Neisseria polysaccharea ATCC 43768]
          Length = 298

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 10/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV   +
Sbjct: 6   DLKAWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPMLVLAAS 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H++Y E TA++ G+ 
Sbjct: 61  ELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVGDA 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L T AF+++S P T+L    +  ++  L    G +GM GGQ +D+ +    + +  +  +
Sbjct: 121 LQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQM 179

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 180 HSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 266

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/228 (37%), Positives = 118/228 (51%), Gaps = 15/228 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L     RI+  L +LL+        Q    L  A+ Y L   GK++R  L    AS   
Sbjct: 3   RLSLWKDRIEDRLRELLV-------PQQPQELFEAMAYYLFQPGKRVRPLLTVAVASSLG 55

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A+ VG AIE IH YSLIHDDLP+MDN   RRG P+ H ++ E  A++AG+ LLTY
Sbjct: 56  GDEEDAITVGCAIEMIHNYSLIHDDLPAMDNDDFRRGLPSCHRKFGEAMAVLAGDALLTY 115

Query: 127 AFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           AFE++S       L      +L+ ++    G+ GM+GGQ LDI      E  +  +   K
Sbjct: 116 AFELMSKEGVFRTLSPEEVVKLINTIAVKSGIGGMVGGQALDIGG----EENLEEVNLKK 171

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL      SG I++H     KE L   G   G++FQL DD+LD + 
Sbjct: 172 TAALFEACFISGGIVSHRGDLFKE-LEEVGREFGLLFQLVDDILDRDG 218


>gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
          Length = 295

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 120/238 (50%), Gaps = 13/238 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
            + L      I+  L  LL  T           L  A+ Y+LL GGK+IR  L       
Sbjct: 5   EAYLAAKKTVIEARLQQLLPVTEPAFAP-----LYKAMNYSLLAGGKRIRPILFLAALEA 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + V  A+EC+H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLL
Sbjct: 60  LGKESSVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLL 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181
           T+AFE+++  +    + I    +  L H  G  GM+GGQ  D+  E    I    + ++ 
Sbjct: 120 TFAFELLARQRVADAEKI-GACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMH 178

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + KTG +         I+A A    ++ L+ + E LG+ FQ+ DD+LD    E +L K
Sbjct: 179 RGKTGVIFEAVMSMAGILAAAPAAVRQVLQAYAEQLGLTFQITDDILDACGTEAELGK 236


>gi|262274770|ref|ZP_06052581.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Grimontia
           hollisae CIP 101886]
 gi|262221333|gb|EEY72647.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Grimontia
           hollisae CIP 101886]
          Length = 310

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 89/240 (37%), Positives = 125/240 (52%), Gaps = 19/240 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRL--------------LSAIRY-ALLGGKKIRSFLVT 59
           +I  + D  L  T  H QT++ND+L              + A+++ ALLGGK++R FL  
Sbjct: 8   KIRAMSDTALTSTLLHYQTRNNDKLAYWLASLGHQEQPLIQAMKHGALLGGKRVRPFLTY 67

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF           AA+ECIH YSLIHDDLP+MDN  +RRG+PT H+ +DE +AI+A
Sbjct: 68  MTGKLFGAPDEALDTPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHVAFDEASAILA 127

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++      +    R Q++  L    G  GM  GQ LD+  E   +D   
Sbjct: 128 GDALQTLAFTILAEGDLSPEGEAYRIQMVKELAAASGAAGMCLGQALDLSAEGKKVDVDT 187

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A   GA+ A         +L  F   +G+ FQ+ DD+LD   D  
Sbjct: 188 LETIHRNKTGALIRCAVRLGALAAGKKGATYLSQLDTFSNAIGLAFQVQDDILDIISDTE 247


>gi|171464023|ref|YP_001798136.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193561|gb|ACB44522.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 300

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 93/242 (38%), Positives = 133/242 (54%), Gaps = 16/242 (6%)

Query: 1   MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFL 57
           MN        +  +S R +  LD LL    +        RL  AIRYA  GG K+IR  L
Sbjct: 1   MNSVFSFHEWVTSHSIRTEQTLDRLLDSAQTI-----PHRLHEAIRYAAQGGGKRIRPLL 55

Query: 58  VTECASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           V     L N    V          AIECIH YSL+HDDLP MD+ Y+RRG+PTVH  +DE
Sbjct: 56  VYAAGQLGNKSDVVPVEFLDAAAVAIECIHAYSLVHDDLPCMDDDYLRRGRPTVHKAFDE 115

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EF 171
            TA++ G+ L T AFEI+++  T     +R +++ +L    G +GM GGQ +D++   + 
Sbjct: 116 ATALLVGDALQTRAFEILAN--TNGDAQVRLRMISTLAAASGSRGMAGGQAIDLESVGKK 173

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +D   +  +  MKTGAL+  A E G I AH +  +  +L+ + ++LG+ FQ+ DD+LD  
Sbjct: 174 LDLQGLKQMHAMKTGALLSCAVELGGIAAHLNFAQMMQLQSYSKSLGLAFQIVDDVLDAT 233

Query: 232 ED 233
            D
Sbjct: 234 AD 235


>gi|15669051|ref|NP_247855.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
           [Methanocaldococcus jannaschii DSM 2661]
 gi|2497457|sp|Q58270|IDSA_METJA RecName: Full=Bifunctional short chain isoprenyl diphosphate
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyl pyrophosphate synthase; Short=FPP
           synthase; AltName: Full=Geranyltranstransferase
 gi|1591545|gb|AAB98865.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 327

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/230 (33%), Positives = 124/230 (53%), Gaps = 19/230 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +   ++ID  L   + +         +D+L +A ++ L  GGK+IR +L      L   +
Sbjct: 15  KNILQKIDEELKTYVDK---------DDKLYNASKHLLFAGGKRIRPYLTVVTYMLKKDD 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L   AA+E IH Y+LIHDD+  MDN   RRGKPTVH+ Y E  AI+AG+ L   AF
Sbjct: 66  IEEVLPAAAAVELIHNYTLIHDDI--MDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
           E +S     +KDN ++  +L +     +  +  GQ +D++ E  +    +   + + KTG
Sbjct: 124 EAVSR----IKDNKKAHEVLKILSKACV-EVCEGQAMDMEFENYYPTMEEYLDMIRKKTG 178

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AL+  +   GA+MA  ++ E+E L+ + + +G+ FQ+ DD+LD   D  K
Sbjct: 179 ALLEASVGIGAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKK 228


>gi|260174038|ref|ZP_05760450.1| putative isoprenyl synthetase [Bacteroides sp. D2]
 gi|315922307|ref|ZP_07918547.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696182|gb|EFS33017.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 324

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TA+++G+ +L  AF  ++    
Sbjct: 66  TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E    + E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG ++G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|237720117|ref|ZP_04550598.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450669|gb|EEO56460.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 324

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TA+++G+ +L  AF  ++    
Sbjct: 66  TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E    + E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG ++G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
 gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
 gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
 gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
          Length = 297

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 132/233 (56%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + ++E+   ++  L     Q       Q  + L  A+ Y+L  GGK++R  L+    
Sbjct: 5   AFDAFVKESKTFVEEQLARYANQL------QCPNVLREAMTYSLEAGGKRLRPLLLFATL 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+G
Sbjct: 59  QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLT+AF+++++   Q +    + +L L L    G +GM+ GQ+ D++ E   ++ +++  
Sbjct: 119 LLTHAFQVVTAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I K KTG L+ +A  +GA++A A+  ++++L  F + +G+ FQ+ DD+LD E 
Sbjct: 179 IHKHKTGRLLEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEG 231


>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
 gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
           Japonica Group]
 gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
           Japonica Group]
 gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
          Length = 376

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 12/236 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           +      L   +  +   LD         M     +RL  ++RY+ L GGK++R  L   
Sbjct: 81  SFDFQRYLSARADAVHDALDR-------AMPRGFPERLCESMRYSVLAGGKRVRPVLALA 133

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A  V  A+E IH  SLIHDD+P MD+  +RRG+P+ H+ + E TA++AG
Sbjct: 134 ACELVGGDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAG 193

Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176
           + L   AFE ++       +  +   + +  L    G  G+  GQ+ D + E +      
Sbjct: 194 DALHALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAM 253

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I   KT  L+  A  SGAI+   +  E ER+R +   +G++FQ+ DD+LD   
Sbjct: 254 LEYIHVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTS 309


>gi|227530530|ref|ZP_03960579.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
 gi|227349536|gb|EEJ39827.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
          Length = 290

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 12/229 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L+E  ++ID  L+  +              L S++ Y++  GGK++R  L      +F 
Sbjct: 3   ELKELKEQIDQFLEQQMPSDID------QPTLASSMEYSVNAGGKRLRPALTLTTVQIFG 56

Query: 67  VN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
              +   ++   AIE +H YSLIHDDLP+MDN  +RRGKPT H ++    A +AG+GLLT
Sbjct: 57  GQLNQNVMKASTAIELLHTYSLIHDDLPAMDNDDLRRGKPTNHKKFGAGMATLAGDGLLT 116

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
            AF+ ++    QL    +++L L+L    G  GM+ GQ  DI+ E   +   Q+  + + 
Sbjct: 117 MAFQWLTD--NQLPTETQAELTLALAKAAGPAGMVAGQARDIEGEHQNLTLEQLRYLHRQ 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L+ +A  +G I+       K  L  FG   G+ FQ+ DDL+D   
Sbjct: 175 KTGDLLSYAVLAGGIITKQDSTTKNLLADFGAQFGLAFQIYDDLMDVVG 223


>gi|329298746|ref|ZP_08256082.1| polyprenyl synthetase [Plautia stali symbiont]
          Length = 299

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 127/231 (54%), Gaps = 10/231 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN 68
           +   +R++  L  L+           +  L++A++Y ALLGGK++R FLV     +    
Sbjct: 8   RAYHERVNQALTRLIDPL-----PFQSSPLVNAMQYGALLGGKRLRPFLVYATGEMLRAE 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI+Y E TAI+AG+ L T AF
Sbjct: 63  AASLDAPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIKYGEDTAILAGDALQTLAF 122

Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
            I++  P   +    R  ++  L    G+ GM  GQ LD+  E   +D  Q+  I + KT
Sbjct: 123 TILADQPMPGVSPQDRIAMISELAQASGVAGMCCGQALDLAAEGKSVDLNQLEQIHRHKT 182

Query: 186 GALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A   GA+ A A+  +   +L  +   +G+ FQ+ DD+LD   D  
Sbjct: 183 GALIRAAVRLGALTAGAAGRDALPQLDIYANAIGLAFQVQDDILDVVGDTA 233


>gi|157962808|ref|YP_001502842.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345]
 gi|157847808|gb|ABV88307.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345]
          Length = 293

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 137/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   L+   +RI+  L+  +   A       + +L +A+++ AL+GGK+IR FLV     
Sbjct: 2   LLESLKLYQERINQQLELRIDSLADI-----DPQLKAAMKHGALIGGKRIRPFLVYAIGD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +  V   T     AAIEC+H YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MLGVKLSTLDSCAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
              AFEIIS P   +  +    ++ +L +  G  GM GGQ +D+   D+ I+   +  + 
Sbjct: 117 QALAFEIISEPIENITPSQNLAMVRALANASGYSGMCGGQAMDLSATDKQIELATLIQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           K+KTGAL+  A E   I A     E++ L  F + +G+ FQ+ DD+LD     E+L K
Sbjct: 177 KLKTGALIRCAVEFAIIAAKIEGQERQALLDFADAIGLAFQVQDDVLDIIASTEELGK 234


>gi|197334446|ref|YP_002155475.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
           fischeri MJ11]
 gi|197315936|gb|ACH65383.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [Vibrio
           fischeri MJ11]
          Length = 298

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 89/244 (36%), Positives = 131/244 (53%), Gaps = 18/244 (7%)

Query: 1   MNGGLPSKLQ----ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
           M   L  +L      N ++++  L+ + +Q            L  A++Y+LL GGK+ R 
Sbjct: 1   MTDSLKQQLTFFQNRNIEQLNQWLEKIEIQQ---------QPLTEAMKYSLLLGGKRARP 51

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           +LV   A +  +    A    AAIEC+H YSLIHDDLP+MDN  +RRG  T HI+YDE T
Sbjct: 52  YLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEAT 111

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172
           AI+AG+ L T AFEI+++ +        R  ++  L+   G  GM  GQ LD+Q E   +
Sbjct: 112 AILAGDALQTLAFEILANGQLSDDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKV 171

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCE 231
           D T +  I   KTGAL+  A + GA+ A    +    +L  + + +G+ FQ+ DD+LD  
Sbjct: 172 DLTSLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLEVYADAIGLAFQVQDDILDII 231

Query: 232 EDLP 235
            D  
Sbjct: 232 SDTE 235


>gi|291545449|emb|CBL18557.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus sp. SR1/5]
          Length = 301

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/240 (31%), Positives = 126/240 (52%), Gaps = 12/240 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
               +L+  ++  + ++ + L + +   +T     +  A+ Y++  GGK++R  L+ E  
Sbjct: 8   NFKEELKRRTEEAEHVIREYLPEESGFAKT-----MAEAMNYSMTAGGKRLRPILIRETY 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF           AA+E IH +SLIHDDLP++DN   RRG+ T H  Y E   +++G  
Sbjct: 63  ELFGGKDKLCEPFMAAMEMIHTHSLIHDDLPALDNDDYRRGRLTTHKVYGEAMGVLSGVA 122

Query: 123 LLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179
           LL  A+E++ S      D  R    M  +    G+ GMLGGQ +D++++        +  
Sbjct: 123 LLNRAYEVMLSAFDLTGDKDRVIAAMRIIADKTGINGMLGGQSVDVENDGKPLEHKMLDY 182

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I K KT AL+  +  +GA++A AS+ E + +    EN+G+ FQ+ DD+LD     E+L K
Sbjct: 183 IYKNKTSALIEASMMTGAVLAGASEKELKVVEQAAENIGLAFQIQDDILDVTSTQEELGK 242


>gi|160882687|ref|ZP_02063690.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483]
 gi|299147995|ref|ZP_07041058.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
 gi|156111857|gb|EDO13602.1| hypothetical protein BACOVA_00644 [Bacteroides ovatus ATCC 8483]
 gi|298514178|gb|EFI38064.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
          Length = 342

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 24  QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 83

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TA+++G+ +L  AF  ++    
Sbjct: 84  TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 141

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E    + E +   + ++KT  L+  + 
Sbjct: 142 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSL 195

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG ++G+ FQL DDLLD   D     KK
Sbjct: 196 KIGAILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 242


>gi|308185891|ref|YP_003930022.1| geranyltranstransferase [Pantoea vagans C9-1]
 gi|308056401|gb|ADO08573.1| geranyltranstransferase [Pantoea vagans C9-1]
          Length = 264

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 85/203 (41%), Positives = 117/203 (57%), Gaps = 8/203 (3%)

Query: 43  IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + Y ALLGGK++R FLV     + + N  +     AA+ECIH YSLIHDDLP+MDN  +R
Sbjct: 1   MHYGALLGGKRLRPFLVYATGEMLHANPASLDVPAAAVECIHAYSLIHDDLPAMDNDALR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RG+PT HI+Y E TAI+AG+ L T AF I++      +    R  ++  L    G+ GM 
Sbjct: 61  RGQPTCHIKYGEDTAILAGDALQTLAFSILADEAMPGVSAEYRLMMLSELAKASGVAGMC 120

Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENL 217
           GGQ LD+  E   ID  Q+  I + KTGAL+  A   GA+ A  A +     L  + E +
Sbjct: 121 GGQALDLAAEGKSIDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLDRYAEAI 180

Query: 218 GIIFQLADDLLDCEED---LPKK 237
           G+ FQ+ DD+LD   D   + K+
Sbjct: 181 GLAFQVQDDILDVIGDTAVIGKR 203


>gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. NRRL B-14911]
 gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. NRRL B-14911]
          Length = 298

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/219 (37%), Positives = 129/219 (58%), Gaps = 6/219 (2%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +L+  L ++ S +     + L  A+ Y+L  GGK+IR  LV      F  +    L+  
Sbjct: 16  KMLERELEESVSRLAA--PEVLKKAMHYSLQAGGKRIRPLLVFATLKAFGEDTKKGLQAA 73

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E IH YSLIHDDLPSMD+  +RRGKPT H  + E  AI+AG+ LLTY+F++++    
Sbjct: 74  AAVEMIHTYSLIHDDLPSMDDDDLRRGKPTSHKVFGEANAILAGDALLTYSFQLLAQMAP 133

Query: 137 QLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
           +  D  ++  L+  L    G +GM+GGQ  DI  +D+ +D  ++  I   KTG L+ F+ 
Sbjct: 134 EDADAEVKLALINELARASGAEGMVGGQTADIEGEDKDLDLEELEYIHVHKTGKLLAFSV 193

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +GA+++ A ++  + L  F  +LG+ FQ+ DD+LD E 
Sbjct: 194 AAGALLSRAEESRLKSLNEFAHHLGLAFQIRDDILDLEG 232


>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 296

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 132/240 (55%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   + S L    K I+  L                D L  ++ Y+L  GGK++R  +V 
Sbjct: 1   MTNKITSFLAGRKKTIENQLSIYTENLD------MPDSLKKSMLYSLEAGGKRLRPLIVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              + +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  + E TA++A
Sbjct: 55  AVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114

Query: 120 GNGLLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+GLLT +F++I+S  + ++    R +L+  L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADMEAENRQVTLEE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I + KT  L+ F   +GAI+A A + + E LR F  ++GI FQ+ DD+LD E    K
Sbjct: 175 LESIHERKTAKLLSFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEK 234


>gi|238760656|ref|ZP_04621781.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236]
 gi|238701121|gb|EEP93713.1| Geranyltranstransferase [Yersinia aldovae ATCC 35236]
          Length = 306

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 132/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +R++  L D +           N  L+ A+RY A+LGGK++R +LV    
Sbjct: 9   DFSQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++        AAIECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSPTNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123

Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++ +P   + D  R  ++  L H  G+ GM GGQ LD++ E   I    +  
Sbjct: 124 LQTLAFSILAQAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLEAEARQISLEDLER 183

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA  A    +     L  + E +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGAFAAGEQGRKALTLLDRYSEAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|308048592|ref|YP_003912158.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799]
 gi|307630782|gb|ADN75084.1| farnesyl-diphosphate synthase [Ferrimonas balearica DSM 9799]
          Length = 294

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 132/235 (56%), Gaps = 10/235 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
           + L     R++  L+ +            + RLL A+RY  LLGGK++R FLV    ++ 
Sbjct: 3   TALSHYQTRVNAALERIFDDL-----PVTDPRLLDAMRYGTLLGGKRVRPFLVYATGTML 57

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                    + AA+ECIH YSLIHDDLP+MD+ ++RRG+PTVHI +DE TAI+AG+ L  
Sbjct: 58  GAKEDDLDSLAAAVECIHAYSLIHDDLPAMDDDHLRRGQPTVHIAFDEATAILAGDALQG 117

Query: 126 YAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
            A+E+++        +  R  ++ SL    G QGM GGQ +D+    + I+   +  + +
Sbjct: 118 LAYELLAEAPLPAALEGNRIAMLRSLARASGYQGMCGGQAIDLASTGKRIELDALQQLHR 177

Query: 183 MKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +KTGAL+  A E G+  +A  +   ++ L  + E +G+ FQ+ DD+LD   D  +
Sbjct: 178 LKTGALIRSAVEMGSYGVADLATEHRDALLRYAEAIGLAFQVQDDILDITADTEQ 232


>gi|288801181|ref|ZP_06406636.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331792|gb|EFC70275.1| polyprenyl synthetase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 325

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           + +L  L     S +  +    L   I+Y+L +GGK+IR  L+     L+  +  + L V
Sbjct: 5   NELLQILNQYIDSIVFDRKPASLYEPIKYSLSMGGKRIRPMLMLLTYQLYKNDPQSILPV 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            +A+E  H Y+L+HDDL  MDN  +RRG+PTVH +++  TAI++G+ +L +A+++++   
Sbjct: 65  ASALETYHNYTLLHDDL--MDNALLRRGQPTVHKKWNANTAILSGDSMLVFAYKLLAECN 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFA 192
                 +           I    +  GQ  D+  E    + E++   + ++KT  L+  +
Sbjct: 123 VDKLKEVL------DLFTITALEIGEGQQYDMDFELRNDVAESEYIEMIRLKTSVLLACS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + GAI+A A   +   L  FGE +G+ FQL DD LD   D  
Sbjct: 177 MKIGAILAGAPSEDANNLYRFGELIGLAFQLQDDYLDVYGDSK 219


>gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
 gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
          Length = 297

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + L+E+   ++  L     Q       Q  + L  A+ Y+L  GGK++R  L+    
Sbjct: 5   AFDAFLKESKAFVEEQLVRYANQL------QCPNVLREAMIYSLEAGGKRLRPLLLFATL 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+G
Sbjct: 59  QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLTYAF+ +++   Q ++   + +L L L    G +GM+ GQ+ D++ E   ++   +  
Sbjct: 119 LLTYAFQAVTAYDHQDVQAETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLEREGLEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I K KTG L+ +A  +GAI+A A+  ++E+L  F + +G+ FQ+ DD+LD E 
Sbjct: 179 IHKHKTGRLLEYAVLAGAILAGATPEQEEKLLAFAKYIGLAFQIRDDILDVEG 231


>gi|257452580|ref|ZP_05617879.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317059120|ref|ZP_07923605.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684796|gb|EFS21631.1| dimethylallyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 290

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 13/235 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
           ++   +  +    ++L Q  +         +   ++YA L GGK+IR  L+    SL   
Sbjct: 1   MKNYREYFNKRFGEVLTQYNT------PVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGK 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+E IH YSL+HDDLP+MDN   RRG+ T H ++ E   I+ G+ LLT A
Sbjct: 55  ERDLGFPFAAALEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNA 114

Query: 128 FEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
           F ++       +      +++   +   G+ GM+GGQ +D     + I    +  I + K
Sbjct: 115 FSVMVRGSIGKVPSEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHK 174

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           TG L+        I+  AS  ++E L  +G+ +G+ FQ+ DD+LD E    +L K
Sbjct: 175 TGRLLLLPILVACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGK 229


>gi|298479711|ref|ZP_06997911.1| polyprenyl synthetase [Bacteroides sp. D22]
 gi|298274101|gb|EFI15662.1| polyprenyl synthetase [Bacteroides sp. D22]
          Length = 324

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TA+++G+ +L  AF  ++    
Sbjct: 66  TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E    + E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG ++G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGATAEDAENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
 gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
          Length = 297

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 132/233 (56%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              + ++E+   ++  L     Q       Q  + L  A+ Y+L  GGK++R  L+    
Sbjct: 5   AFDAFVKESKTFVEEQLVRYANQL------QCPNVLREAMTYSLEAGGKRLRPLLLFATL 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       +    A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+G
Sbjct: 59  QAFEKERELGIGAACALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDG 118

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           LLT+AF+++++   Q +    + +L L L    G +GM+ GQ+ D++ E   ++ +++  
Sbjct: 119 LLTHAFQVVTAYHHQDISTETKLRLALELAKAAGPEGMVAGQVADMEAEGKRLELSELEY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I K KTG L+ +A  +GA++A A+  ++++L  F + +G+ FQ+ DD+LD E 
Sbjct: 179 IHKHKTGRLLEYAVLAGAVLAGATPEQEKKLLAFAKYIGLAFQIRDDILDVEG 231


>gi|167624992|ref|YP_001675286.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167355014|gb|ABZ77627.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 293

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 87/207 (42%), Positives = 126/207 (60%), Gaps = 6/207 (2%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + +L +A+++ AL+GGK+IR FLV     +  V   T     AAIECIH YSLIHDDLP+
Sbjct: 28  DPQLKAAMKHGALIGGKRIRPFLVYAIGDMLGVKLTTLDSCAAAIECIHAYSLIHDDLPA 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PTVHI +DE TAI+AG+ L   AFEIIS P   +  +    ++ +L +  
Sbjct: 88  MDDDALRRGQPTVHIAFDEATAILAGDALQALAFEIISDPIENITPSQNLAMVKALANAS 147

Query: 155 GLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM GGQ +D+   ++ I+   +  + K+KTGAL+  A E   I A     E++ L  
Sbjct: 148 GYSGMCGGQAMDLSATNKQIELATLIKLHKLKTGALIRCAVEFAIIAAKVDGQERQALLD 207

Query: 213 FGENLGIIFQLADDLLDC---EEDLPK 236
           F + +G+ FQ+ DD+LD     E+L K
Sbjct: 208 FADAIGLAFQVQDDVLDIIASTEELGK 234


>gi|310766823|gb|ADP11773.1| Geranyltranstransferase [Erwinia sp. Ejp617]
          Length = 299

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/229 (37%), Positives = 122/229 (53%), Gaps = 10/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           L  + +R++  L   + Q         +  L++A+ Y ALLGGK++R FLV     +   
Sbjct: 7   LTSHYQRVNAALQGFISQL-----PFQSTPLVNAMEYGALLGGKRLRPFLVYATGDMLRA 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N        AAIECIH YSLIHDDLP+MDN  +RRG+PT HI++ E  AI+AG+ L T A
Sbjct: 62  NDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLRRGQPTCHIKFGEEAAILAGDALQTLA 121

Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F I++  P   +    R  ++  L    G+ GM GGQ LD+  E   +   ++  I + K
Sbjct: 122 FSILADAPMPGVVAESRIAMLSELAQASGVAGMCGGQALDLAAEGKQVTLNELEQIHRHK 181

Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           TGAL+  A   GA+ A    +     L  F   +G+ FQ+ DD+LD   
Sbjct: 182 TGALIRSAVRLGALTAGERGRAALPALDRFANAIGLAFQVQDDILDVTG 230


>gi|298385074|ref|ZP_06994633.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
 gi|298262218|gb|EFI05083.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
          Length = 324

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    + +  T+  + L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H ++L+HDDL  MD   +RRGKPTVH  +++ TAI++G+ +L  AF  ++    
Sbjct: 66  TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E  +   E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVIDLFSLT------ALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A AS  + E L  FG  +G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|293373955|ref|ZP_06620297.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
 gi|292631176|gb|EFF49812.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
          Length = 342

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 24  QLLDKINNHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 83

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TA+++G+ +L  AF  ++    
Sbjct: 84  TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPP 141

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E    + E +   + ++KT  L+  + 
Sbjct: 142 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAGSL 195

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG ++G+ FQL DDLLD   D     KK
Sbjct: 196 KIGAILAGATAEDAENLYNFGMHIGVAFQLQDDLLDVYGDPEVFGKK 242


>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 307

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 126/237 (53%), Gaps = 11/237 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + L E  + +   ++  + +           R+  A+R++L  GGK++R  L   
Sbjct: 12  SFDLKAFLTEYGRLVVAAMEKRIARY------PEESRVTQAMRHSLFAGGKRLRPILCMT 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A     N    + V AA+E IH YSLIHDDLP++D+   RRG PT H  +DE TAI+AG
Sbjct: 66  SAEAVGGNKDHVMDVAAALEFIHTYSLIHDDLPALDDDDYRRGTPTCHKAFDEATAILAG 125

Query: 121 NGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           +GLLT AFEI+S       L       ++  ++H  G  GM+ GQMLDI+ E   +   +
Sbjct: 126 DGLLTSAFEILSHAADDGLLPAEKVLTIIAGISHAAGCNGMILGQMLDIEGEHESLTREE 185

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  I   KTGA++  +  SGA +   +  +   L  + +N+G+ FQ+ DD+L+   D
Sbjct: 186 LEDIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDVYAKNVGLAFQVIDDILNVIGD 242


>gi|124027425|ref|YP_001012745.1| geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM
           5456]
 gi|123978119|gb|ABM80400.1| Geranylgeranyl pyrophosphate synthetase [Hyperthermus butylicus DSM
           5456]
          Length = 336

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 12/242 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G LP  +    KR+ +++D  +         +  D  L  IR    GGK++R  +V  
Sbjct: 1   MTGQLPESVVAYLKRVASLVDGYIYAKVKGEPKEVYDAGLHLIR---AGGKRLRPAIVVA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A         AL   AA+E +H ++LIHDD+  MD    RRG PTVH  + E  AI AG
Sbjct: 58  IAEALGEPAERALPFAAAVELVHNFTLIHDDI--MDRDEFRRGVPTVHKVWGEPLAITAG 115

Query: 121 NGLLTYAFEIISSP---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + L   AFE ++             R+  +LS    +  +G     M + +DE +   + 
Sbjct: 116 DLLFAKAFETLTDALDKGIPPDRVARATRVLSRASAVIAEGQAMDLMFEEEDE-VSIDEY 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
            ++   KTGAL   +   G ++A       E+L  FG+NLGI FQ+ DD+L     EE+L
Sbjct: 175 LIMIYKKTGALFEASAVLGGLVATGDDATLEKLAEFGKNLGIAFQIRDDILGIVGKEEEL 234

Query: 235 PK 236
            K
Sbjct: 235 GK 236


>gi|114566119|ref|YP_753273.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337054|gb|ABI67902.1| farnesyl-diphosphate synthase [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 301

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/240 (32%), Positives = 128/240 (53%), Gaps = 7/240 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L    +E  +R    +D+ L+       +     +  A+ YA+  GGK++R  +V 
Sbjct: 1   MNFDLEHFQEEIRQR-KEFVDNCLIGCLLSPDSD-PPLIHQAMHYAIFNGGKRLRPIMVL 58

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A +       A+ V  A+E IH YSL+HDDLP MD+   RRG+PT H  + E  A++ 
Sbjct: 59  EGAKIAGGEAEQAIPVACALEMIHSYSLVHDDLPCMDDDDFRRGQPTCHRVFGEANAVLT 118

Query: 120 GNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           G+ LLT AFE++S     + +K +   +++  +    G +GM+GGQ+LD++ E   ID  
Sbjct: 119 GDALLTAAFELLSEKNSVSGIKPDTTLRVIAEIARASGSRGMIGGQILDLEAEGKIIDYE 178

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +  +KTG L   A  +GAI+    +     L  + +N G+ FQ++DD+LD + D  
Sbjct: 179 SLRKLHCLKTGQLFRAALRTGAIVGGIGEKGLLALSDYADNFGLAFQISDDILDVQGDAA 238


>gi|332160732|ref|YP_004297309.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664962|gb|ADZ41606.1| geranyltranstransferase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330861141|emb|CBX71403.1| geranyltranstransferase [Yersinia enterocolitica W22703]
          Length = 306

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +R++  L D +           N  L+ A+RY A+LGGK++R +LV    
Sbjct: 9   DFNQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++  +     AAIECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P   + D  R  ++  L H  G+ GM GGQ LD+  E        +  
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLAAESRQTTLDDLEK 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A A        L  +   +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGAPGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|90579835|ref|ZP_01235643.1| putative geranyltranstransferase [Vibrio angustum S14]
 gi|90438720|gb|EAS63903.1| putative geranyltranstransferase [Vibrio angustum S14]
          Length = 300

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 83/229 (36%), Positives = 121/229 (52%), Gaps = 10/229 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
             +R + +L + L       Q   +  LL A++Y  LLGGK+ R FL      +  V   
Sbjct: 14  YQQRSNDVLANWL-----STQPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGVTQD 68

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                 AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI +DE  AI+AG+ L T AF+I
Sbjct: 69  DLDTPAAAVECIHAYSLIHDDLPAMDDDALRRGQPTCHIAFDEAIAILAGDALQTLAFDI 128

Query: 131 ISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGA 187
           +++ +     N  R  ++  L    G  GM  GQ   LD + + +   Q+ +I + KTGA
Sbjct: 129 LANGQLSQDGNTQRIAMVSELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGA 188

Query: 188 LMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+  A   GA+ A         +L  + E +G+ FQ+ DD+LD   D  
Sbjct: 189 LIRCAVRLGALAAGDKGVAILPQLDKYAEAIGLAFQVQDDILDVISDTE 237


>gi|325109156|ref|YP_004270224.1| polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324969424|gb|ADY60202.1| Polyprenyl synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 314

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 87/251 (34%), Positives = 128/251 (50%), Gaps = 31/251 (12%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
            S +++    I   LD      A+       DRL  A RY+LL GGK++R  LV   A  
Sbjct: 5   SSYVEQFQTLIKEELDR-----AAQFTADCPDRLSEASRYSLLAGGKRLRPLLVLLSAQA 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +      L    AIE +H YSLIHDDLP+MD+  +RRG+PT H Q+DE TAI+AG+GLL
Sbjct: 60  CSGKPEPGLPAALAIEMVHTYSLIHDDLPAMDDDDLRRGRPTCHRQFDEATAILAGDGLL 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------------ 172
           T AFE +++    +      + +L L+   G++GM+GGQ  D+  E              
Sbjct: 120 TRAFETLAA--GIVDPATAVRCVLELSRASGVEGMVGGQQADLDAEKRFEQIESKSSEET 177

Query: 173 -----------DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                      +  Q+  I + KTG L+  A   GAI+  A   + + +  +G+ +G+ F
Sbjct: 178 AENPAEPSDEAELQQLKAIHRRKTGKLITCAVRMGAILGGADDAQLDAITRYGDAIGLAF 237

Query: 222 QLADDLLDCEE 232
           Q+ DD+LDC  
Sbjct: 238 QVMDDILDCTS 248


>gi|23099332|ref|NP_692798.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
 gi|22777561|dbj|BAC13833.1| geranyltranstransferase [Oceanobacillus iheyensis HTE831]
          Length = 294

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 86/239 (35%), Positives = 134/239 (56%), Gaps = 10/239 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   L+   ++++   +       SH+   +N  L  ++ Y+L  GGK++R  L+ 
Sbjct: 1   MNENLQRYLEIYREKLEATYNTYF----SHLDIPNN--LKESMLYSLNAGGKRLRPILIL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               ++       +    AIE IH YSLIHDDLP+MD+   RRGK T H Q++E TAI+A
Sbjct: 55  ASYEVYGKTLDKVMSSAVAIEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKQFNEATAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ LLTY+F++ISS      D  + +L+  L+   G  GM+ GQ+LD++ E   +   ++
Sbjct: 115 GDALLTYSFQLISSDDLLTSDE-KVELIRILSEASGPAGMVAGQILDMEAEKQAVTLEEM 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I  +KTG L+ FA  +GA +  A+ N+ + L  +   LG+IFQ+ DD+LD   D  K
Sbjct: 174 EEIHALKTGELIRFAIIAGAYLGGATDNQLKHLTDYAYYLGLIFQVQDDILDITGDASK 232


>gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
 gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
          Length = 296

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 85/244 (34%), Positives = 138/244 (56%), Gaps = 13/244 (5%)

Query: 1   MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
           MN   +   L + +  ++++L +++    + +       L+ A++Y+L  GGK++R  L 
Sbjct: 1   MNQVNIKEILTQYTSEVNSVLKEIMNIEKNALAPG----LVKAMKYSLFSGGKRLRPILT 56

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A + + +  +ALRVGA+IE +H YSLIHDDLPSMD+   RRGKP+ H  +   TAI+
Sbjct: 57  LMVAEMLDGDRDSALRVGASIELVHTYSLIHDDLPSMDDDDFRRGKPSNHKVFGTATAIL 116

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           AG+ LLT+AF I+S     L  +   +++  ++   G  GM+GGQ+LD   +D+ I   +
Sbjct: 117 AGDALLTFAFNILSKLN--LPPDKVLKIIEVISQGAGHNGMVGGQVLDLEAEDKEISLEE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
           +  I   KTGAL   +  +GA  A+  + E   L  +   LG+ FQ+ DD+LD   +   
Sbjct: 175 LKKIHSGKTGALFKSSILAGAYCANPDRTELTALERYARYLGLTFQIVDDILDVTGNEEV 234

Query: 234 LPKK 237
           L K+
Sbjct: 235 LGKR 238


>gi|29347468|ref|NP_810971.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29339368|gb|AAO77165.1| putative isoprenyl synthetase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 324

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+  + L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINNHLSEIQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H ++L+HDDL  MD   +RRGKPTVH  +++ TAI++G+ +L  AF  ++    
Sbjct: 66  TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E  +   E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVIDLFSLT------ALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A AS  + E L  FG  +G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGASAADAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
           E681]
 gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           [Paenibacillus polymyxa E681]
          Length = 307

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 120/233 (51%), Gaps = 6/233 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
            +E       ++   L++            L  ++ Y+L  GGK++R  LV   A  F  
Sbjct: 13  FKEYLTGTTDVVSSALIEQFP-ADWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAEAFGG 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   AL V  A+E +H YSLIHDDLP+MD+   RRGK T H  Y E  A++AG+ LLT+A
Sbjct: 72  SREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHA 131

Query: 128 FEIISSP--KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
           F  I     +  +  +    ++  L+   G +GM+GGQ+ D+  E       ++  I   
Sbjct: 132 FYSIVQAGRRHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIEELEFIHLH 191

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KT  L+ F+  +G  +  A +++ E LR FG +LG+ FQ+ DD+LD   D  K
Sbjct: 192 KTADLIIFSLLAGGRIGGADKSQLEALRRFGRDLGLAFQIQDDILDLIGDESK 244


>gi|237713977|ref|ZP_04544458.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262407029|ref|ZP_06083578.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646605|ref|ZP_06724237.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
 gi|294809763|ref|ZP_06768447.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
 gi|229445801|gb|EEO51592.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355732|gb|EEZ04823.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638047|gb|EFF56433.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
 gi|294443003|gb|EFG11786.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
          Length = 324

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINHHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TA+++G+ +L  AF  ++    
Sbjct: 66  TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E    + E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG ++G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGATAEDAENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
 gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
          Length = 297

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 10/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           +  L       + R++T LD +L        +    RL  A+RY  L GGK+IR  L   
Sbjct: 3   DHTLDDFRARCAARVETALDQILPPV-----SVQPSRLHEAMRYTVLAGGKRIRPLLAYA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                 ++         A+E IH YSLIHDDLP+MD+  +RRG+PT H  +DE TAI+AG
Sbjct: 58  AGEALGLDAALLDHPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + L T AF+ ++     L    R  ++ +L    G +GM+GGQ +D++ E   +D  Q+ 
Sbjct: 118 DALQTLAFQALAEA-PGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLE 176

Query: 179 MIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I   KTGAL+  + + G +       ++ ERL  + + LG+ FQ+ DD+LD E D  +
Sbjct: 177 NIHIHKTGALIRVSVQMGVLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQ 235


>gi|55821223|ref|YP_139665.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus LMG 18311]
 gi|55823135|ref|YP_141576.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus CNRZ1066]
 gi|55737208|gb|AAV60850.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus LMG 18311]
 gi|55739120|gb|AAV62761.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus CNRZ1066]
          Length = 290

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 10/228 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69
             K+ID  + D   +    + +     L+ AI Y++  GGK+IR  +  +    F +   
Sbjct: 3   KLKKIDAAIRDFYQKKTPPVSSD----LIIAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            +   V A++E IH  SLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ L    F 
Sbjct: 59  PSHFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187
           +++   T+L   IR QL+ +L+H  G  GM+GGQMLD++ E +  D +Q+  I + KTG 
Sbjct: 119 LVAQ--TELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGK 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+ F   +  I+A       E L+  G  +G+ FQ+ DD+LD   D  
Sbjct: 177 LLTFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADFE 224


>gi|222151415|ref|YP_002560571.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
 gi|222120540|dbj|BAH17875.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
          Length = 290

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           + +  S + +  + RL  ++ Y+L  GGK+IR   V         N +  L  G A+E I
Sbjct: 15  IEEVISGLYSAKDGRLFDSMHYSLSAGGKRIRPLFVLTTIDSLGGNAVDGLSFGVALEMI 74

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H YSLIHDDLP+MDN   RRGK T H  +DE TAI+AG+ LLT +F +I+  K     +I
Sbjct: 75  HTYSLIHDDLPAMDNDDYRRGKLTNHKHFDEATAILAGDALLTDSFRMITEGK--FDADI 132

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMA 200
           +  L+  L+   G +GM+ GQMLD++ E   ++  Q+  +   KTG L+  A  +  I+ 
Sbjct: 133 KLPLISLLSEAAGSKGMVYGQMLDMEGEHQALELNQMEQVHSYKTGELIRAAFVAAGIIM 192

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  + + L   G N+G++FQ+ DD+LD E 
Sbjct: 193 KLTDEKIQLLDQIGRNVGLMFQIQDDILDVEG 224


>gi|119775569|ref|YP_928309.1| geranyltranstransferase [Shewanella amazonensis SB2B]
 gi|119768069|gb|ABM00640.1| farnesyl-diphosphate synthase [Shewanella amazonensis SB2B]
          Length = 293

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 130/231 (56%), Gaps = 8/231 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   L +   R+D +L   +         Q    L +A+R+ AL+GGK+IR FLV     
Sbjct: 2   LKLALADCQSRVDAVLAAHIDAL-----PQTAPALKAAMRHGALIGGKRIRPFLVYAVGE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  V+     R+ AA+EC+H YSLIHDDLP+MD+  +RRGKPTVHI +DE TAI+AG+ L
Sbjct: 57  LLGVDKAKLDRLAAAVECVHAYSLIHDDLPAMDDDNLRRGKPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T AFEIIS     L    +  ++ +L    G  GM GGQ LD+  E   I   ++  + 
Sbjct: 117 QTLAFEIISESDAGLAPKAQVAMIAALARASGYLGMCGGQALDLAGEGKSISLDELTRLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +KTGAL+  A E   I A AS  +   LR + + +G+ FQ+ DD+LD   
Sbjct: 177 NLKTGALIRAAVELALIAADASDADTAALRAYADAIGLAFQVQDDILDITA 227


>gi|291287805|ref|YP_003504621.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884965|gb|ADD68665.1| Polyprenyl synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 299

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             + S L+    +++   +  +         ++   L+ A+RY+L  GGK++R  LV   
Sbjct: 4   FNMQSYLKFWGAKVEEFFETYVA-----CPDENVKGLVDAMRYSLFAGGKRLRPALVFSS 58

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +F      A    AA+E +H YSLIHDDLP+MD+   RRGKPT H  Y E TAI+AG+
Sbjct: 59  YGVFEGYFDKATPFAAAVEMLHTYSLIHDDLPAMDDDDYRRGKPTNHKMYGEATAILAGD 118

Query: 122 GLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           GLLT AFE++  +     ++     +    L    G +GM+GGQ  D++ E    +   V
Sbjct: 119 GLLTKAFEVMCNAEINPDVEPAQMLEAAYKLADAAGDRGMVGGQFTDMEAEDGVFNSATV 178

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
             I   KT  L+ + CE GAI+   S+++K+R+R +G  +G+ FQ+ DD+LD     E+L
Sbjct: 179 DFIHMNKTSRLISYCCELGAILGFGSEDDKKRMREYGIRIGLAFQIVDDILDIASTTEEL 238

Query: 235 PK 236
            K
Sbjct: 239 GK 240


>gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N]
 gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N]
          Length = 303

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 126/237 (53%), Gaps = 16/237 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
            L + +  I+ +L+ L+             RL  A+RYA+LGG K++R+ LV        
Sbjct: 11  WLHDRALHIEQVLETLMPAADIA-----PARLHEAMRYAVLGGGKRVRAALVYAAGQACP 65

Query: 67  VN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           VN        +  R  AA+E IH YSL+HDDLP MD+  +RRG+PT H+Q+DE TA++AG
Sbjct: 66  VNSSLLAIEASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L   AFE+++     +   +  Q    L    G  GM GGQ +D+    + +   ++ 
Sbjct: 126 DALQPLAFELLA--GMPIAPALVVQATQVLARAAGSLGMAGGQAIDLHSVGKRLTRDELQ 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  MKTGA++  +   G ++A AS   ++ L  + + +G+ FQ+ DD+LD   D  
Sbjct: 184 TMHSMKTGAMLAASVTLGGVVAGASSAVRQALDAYAQAVGLAFQVVDDILDVTADSA 240


>gi|123443361|ref|YP_001007335.1| geranyltranstransferase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090322|emb|CAL13188.1| geranyltranstransferase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 306

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +RI+  L D +           +  L+ A+RY A+LGGK++R +LV    
Sbjct: 9   DFNQQLAAHQQRINQALLDYIAPL-----PFGSSDLVEAMRYGAVLGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++  +     AAIEC+H YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSLTSLDAPAAAIECVHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P  ++ D  R  ++  L +  G+ GM GGQ LD++ E   I   ++  
Sbjct: 124 LQTLAFSILAEAPMPEVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQITLDELER 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A AS       L  +   +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGASGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|282859641|ref|ZP_06268743.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
 gi|282587559|gb|EFB92762.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
          Length = 324

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 12/221 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           + ILD +    A+    +    L   I+Y L LGGK+IR  L+    +L+  N    L  
Sbjct: 5   EEILDKVNQYIANLAYEREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNLYKDNPEDILAQ 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E  H Y+L+HDDL  MDN  +RRG  TVH +++   AI++G+ +L  AFE I+S  
Sbjct: 65  ACGLETYHNYTLLHDDL--MDNAPLRRGHQTVHEKWNANAAILSGDTMLVLAFERIAS-- 120

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
                +      L     +    +  GQ LD++ E    + E +   + ++KT  L+  A
Sbjct: 121 ----GDPAQLKALLNLFTVTALEIGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSVLLACA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GAI+A AS+ +   L  FGE +G+ FQL DD LD   D
Sbjct: 177 LKMGAILAEASEEDARNLYIFGEKIGLAFQLQDDYLDVYGD 217


>gi|226942935|ref|YP_002798008.1| geranyltranstransferase [Azotobacter vinelandii DJ]
 gi|226944165|ref|YP_002799238.1| geranyltranstransferase [Azotobacter vinelandii DJ]
 gi|226717862|gb|ACO77033.1| geranyltranstransferase [Azotobacter vinelandii DJ]
 gi|226719092|gb|ACO78263.1| geranyltranstransferase [Azotobacter vinelandii DJ]
          Length = 295

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 79/236 (33%), Positives = 130/236 (55%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +  ++   R+D  L+ LL    + +Q     RL  A+RY+++ GGK++R  LV     
Sbjct: 2   IAAYQKQCQARVDAALEALLQPPRAELQ-----RLYQAMRYSVVNGGKRVRPLLVYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGTPERAEGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
              AFE+++ P+   +D  +R ++  +L    G  GM+GGQ +D++     +D   +  +
Sbjct: 117 QALAFEVLTDPRRNPRDAGLRLEMSRTLARAAGPAGMVGGQAIDLEAVGRRLDRDALETM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  +   GA+ +  A + +   L  +   +G+ FQ+ DD+LD E D  
Sbjct: 177 HRHKTGALIEASVRLGALASGRADETDLAALAVYARAIGLAFQVQDDILDVESDTA 232


>gi|323488929|ref|ZP_08094166.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
 gi|323397321|gb|EGA90130.1| geranyltranstransferase [Planococcus donghaensis MPA1U2]
          Length = 293

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 85/235 (36%), Positives = 138/235 (58%), Gaps = 10/235 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFN 66
           L +     + ++   + Q    +     D L  ++ Y+L  GGK+IR  L+      +  
Sbjct: 3   LTQFRSHYEPLIQQEMAQLILSLSI--PDSLKESMHYSLQAGGKRIRPILLLAVLHEMTG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             H  AL+V AAIE IH YSLIHDDLPSMD+  +RRG PT H  + E  AI+AG+ LLTY
Sbjct: 61  KEHPDALKVAAAIEMIHTYSLIHDDLPSMDDDDLRRGMPTNHKVFGEAVAILAGDALLTY 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           +F +++  +  +  + + +L+  ++ + G +GM+GGQ+LDI+ E   +   ++  + ++K
Sbjct: 121 SFGVVARLE-HVSSDDKVRLIDLMSVSAGAEGMVGGQVLDIEGEEKQLQLEELEQVHRLK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           TGAL+ F+  +G I+A A+ +E   L  FG++LG+ FQ+ DD+LD      +L K
Sbjct: 180 TGALLTFSILAGGILAQATNDEIIALSQFGQHLGLAFQIQDDILDVTGTSQELGK 234


>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
          Length = 334

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 7/223 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
           T++ D+  +    +  ++ +++  A+RY++L  G K+    +      LF  N L A   
Sbjct: 49  TLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPT 108

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E +H  SLIHDDLP MD+   RRG P  H  +    AI+AG+ L    F+ I S  
Sbjct: 109 ACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHT 168

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           P   + ++   +++  +   +G  GM  GQ LD++        V  +Q+ K G +   + 
Sbjct: 169 PSDLVPEDRILRVITEIARAVGSTGMAAGQFLDLEG---GPNAVDFVQEKKYGEMGECSA 225

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             GA++A AS  E + +R +G  +G+++++ DD+L+ ++   K
Sbjct: 226 VCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKKTEDK 268


>gi|254671578|emb|CBA09234.1| geranyltranstransferase [Neisseria meningitidis alpha153]
          Length = 298

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L         +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E TA++ G
Sbjct: 59  ASELGGTVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           + L T AF++++ P + L  + +  ++  L    G +GM GGQ +D+ +      +  + 
Sbjct: 119 DALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|327314324|ref|YP_004329761.1| polyprenyl synthetase [Prevotella denticola F0289]
 gi|326945935|gb|AEA21820.1| polyprenyl synthetase [Prevotella denticola F0289]
          Length = 324

 Score =  208 bits (529), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 17/229 (7%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D ILD +     +    +    L   IRY L LGGK+IR  L+    +LF  +  T L  
Sbjct: 5   DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MD+  +RRG+ TVH+++D  TAI++G+ +L  AFE +    
Sbjct: 65  ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122

Query: 136 T-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
              L+D +R          +    +  GQ  D++ E    + E +   + ++KT  L+  
Sbjct: 123 DRHLRDVLRL-------FTVTALEIGEGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           A + GA++A A   + E L  FGE +G+ FQL DD LD   D     KK
Sbjct: 176 AVKLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGDPKVFGKK 224


>gi|59711319|ref|YP_204095.1| geranyltranstransferase [Vibrio fischeri ES114]
 gi|59479420|gb|AAW85207.1| geranyltranstransferase [Vibrio fischeri ES114]
          Length = 301

 Score =  208 bits (529), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 88/244 (36%), Positives = 130/244 (53%), Gaps = 18/244 (7%)

Query: 1   MNGGLPSKLQ----ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRS 55
           M   L  +L      N ++++  L+ + +Q            L  A++Y+LL GGK+ R 
Sbjct: 4   MTDSLKQQLTFFQNRNIEQLNQWLEKIEIQQ---------QPLTEAMKYSLLLGGKRARP 54

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           +LV   A +  +    A    AAIEC+H YSLIHDDLP+MDN  +RRG  T HI+YDE T
Sbjct: 55  YLVYITAQMLGIKAEFADSAAAAIECVHSYSLIHDDLPAMDNDDLRRGHATCHIKYDEAT 114

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172
           AI+AG+ L T AFEI+++ +        R  ++  L+   G  GM  GQ LD+Q E   +
Sbjct: 115 AILAGDALQTLAFEILANGQLSDDAETSRIDMIRVLSKASGASGMCMGQSLDLQAEGKKV 174

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCE 231
           D   +  I   KTGAL+  A + GA+ A    +    +L  + + +G+ FQ+ DD+LD  
Sbjct: 175 DLASLERIHANKTGALIKCAVQLGALCAGDKGKAILPQLEIYADAIGLAFQVQDDILDII 234

Query: 232 EDLP 235
            D  
Sbjct: 235 SDTE 238


>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  208 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 7/219 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRV 75
           T++ ++  +    +  Q+ + +  A+RY++L    K+    +      LF  N L A   
Sbjct: 20  TLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGGNRLAAFPT 79

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG+ L    F  I S  
Sbjct: 80  ACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLGFRHIVSNT 139

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           P   + +    +++  +   +G  GM  GQ LD++           +Q+ K G +   + 
Sbjct: 140 PSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEG---SLNSAEFVQEKKYGEMGECSA 196

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             G ++A A  +E +RLR +G  +G+++++ DD+L+ + 
Sbjct: 197 VCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLEAKS 235


>gi|325205345|gb|ADZ00798.1| geranyltranstransferase [Neisseria meningitidis M04-240196]
          Length = 298

 Score =  208 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L         +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E TA++ G
Sbjct: 59  ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           + L T AF++++ P + L  + +  ++  L    G +GM GGQ +D+ +      +  + 
Sbjct: 119 DALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|73662542|ref|YP_301323.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72495057|dbj|BAE18378.1| geranylgeranyl pyrophosphate synthase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 295

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 84/237 (35%), Positives = 126/237 (53%), Gaps = 12/237 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +  K++  ++ ++ +L + +        ++ N  L  ++RY+L  GGK+IR  L+     
Sbjct: 2   MNKKMEHLTEEVNQLLSETIPN------SKLNTNLEESMRYSLEAGGKRIRPVLLLLTLE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +    +        A+E IH YSLIHDDLP MDN   RRGK T H  + E  AI+AG+ L
Sbjct: 56  MLTDQYKKGFSSALALEMIHTYSLIHDDLPPMDNDDYRRGKLTNHKVFGEWKAILAGDAL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179
           LT AF++I +  + L D  + +L+  L+   G  GM+GGQ LD+Q E     ID   +  
Sbjct: 116 LTKAFDMIVNDDS-LNDVAKVKLIKRLSFASGHLGMVGGQTLDMQSEGAETNIDLDTLEK 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I   KTGAL+ FA  +   +A         L  + E+LG++FQ+ DDLLD   D  K
Sbjct: 175 IHNAKTGALLKFAVMAAVDIAEPENEVSNALESYSEHLGLMFQIKDDLLDIYGDEAK 231


>gi|213962451|ref|ZP_03390713.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
 gi|213954777|gb|EEB66097.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
          Length = 322

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 14/230 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K ++   +  L    S +  +    L   +RY L LGGK++R  L      LF+ ++  A
Sbjct: 2   KTVEQYREAFLDHLNSKLFVKEPRNLYEPMRYILQLGGKRLRPILTLIATDLFDADYHKA 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    AIE  H +SL+HDD+  MD   +RRG+ TVH +++   AI++G+ +L  A++++ 
Sbjct: 62  LNAAMAIEMFHNFSLVHDDI--MDKASLRRGETTVHKKWNTNIAILSGDAMLVKAYQLLD 119

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALM 189
              + +        +L+   +     +  GQ  D+  E   E        + + KT  L+
Sbjct: 120 DYPSDVFS------LLTKILSRTALKVCEGQQWDMDFETQTEVSIPDYLQMIRYKTAVLI 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
             A + G I+A+AS   +  +  FGE LG+ FQL DD LD   D    K+
Sbjct: 174 GAALQMGVIIANASPENQMPIYTFGEELGLAFQLQDDYLDAFGDESFGKR 223


>gi|83312002|ref|YP_422266.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
           AMB-1]
 gi|82946843|dbj|BAE51707.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 301

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 105/238 (44%), Positives = 151/238 (63%), Gaps = 8/238 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L   L   S+ +++ LD LL  + S      + R+  A+RY  L GGK++R FLV 
Sbjct: 6   MSPRLTEALTVVSQAVNSELDRLLPVSESP-----DSRVHEAMRYVTLDGGKRLRPFLVM 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           + ASLFNV    A+RV  AIE IHCYSL+HDDLP MD+  +RRG+PT H  +DE TA++A
Sbjct: 61  QSASLFNVAESAAIRVACAIEMIHCYSLVHDDLPCMDDDDLRRGRPTCHKAFDEATALLA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--V 177
           G+ LLT AFE++ +P T     +R +L+  L H  G QGM+GGQM+D+Q   +D     +
Sbjct: 121 GDALLTKAFEVLVNPATHADPAVRCELVADLAHASGGQGMVGGQMIDLQAHTLDLDVAGI 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +Q++KTG L  F+CE+GA++  A    +  LR +  +LG+ FQ+ADD+LD E D+ 
Sbjct: 181 TRLQQLKTGRLFSFSCEAGAVLGKAHGELRLALRNYAHDLGLAFQIADDILDVEGDVA 238


>gi|255691323|ref|ZP_05414998.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
 gi|260622965|gb|EEX45836.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
          Length = 324

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    A    T+    L   + Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINKYIADIQFTRTPKGLYEPVEYTLSLGGKRIRPVLMLMAYNLYREDVASIYEPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AAIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TA+++G+ +L  AF  +++   
Sbjct: 66  AAIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTACPA 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +    +     L+      +  +  GQ LD++ E    + E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------MLEICEGQQLDMEFESRGDVTEDEYIEMIRLKTAVLLAGSL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG  +G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGATAEDAENLYKFGMQIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|295084865|emb|CBK66388.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens
           XB1A]
          Length = 324

 Score =  207 bits (528), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINHHISEIQFTRTPKGLYEPIEYILSLGGKRIRPVLMLMGYNLYREDVASIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGKPTVH  +++ TA+++G+ +L  AF  ++    
Sbjct: 66  TAIEVYHNHTLLHDDL--MDRSDVRRGKPTVHKVWNDNTAVLSGDAMLILAFRYMTGCPQ 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E    + E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------TLEICEGQQLDMEFESRCDVTEDEYIEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A A+  + E L  FG ++G+ FQL DDLLD   D     KK
Sbjct: 178 KIGAILAGATAEDSENLYHFGMHIGVAFQLQDDLLDVYGDPEVFGKK 224


>gi|119474634|ref|ZP_01614987.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
 gi|119450837|gb|EAW32070.1| geranyltranstransferase [marine gamma proteobacterium HTCC2143]
          Length = 309

 Score =  207 bits (528), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 92/247 (37%), Positives = 143/247 (57%), Gaps = 13/247 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN----DRLLSAIRYALL-GGKKIRS 55
           MN    + L +   R+D +L + L   +S      +     RL  A+ Y+L+ GGK+IR 
Sbjct: 1   MNHDFSAFLMQTKTRVDQLLGEHLGSFSSSYAAVDSGIYLTRLQQAMHYSLINGGKRIRP 60

Query: 56  FLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
            LV   A+    +    +     R+  +IE IH YSLIHDDLP+MD+  +RRG+PT H  
Sbjct: 61  VLVYATAAAITTDVSPVVTANLDRIACSIEMIHAYSLIHDDLPAMDDDDLRRGQPTCHRA 120

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-- 168
           +DE TAI+AG+ L   AFE+++   T+   +I   L+  LT   G +GM+GGQ++D++  
Sbjct: 121 FDEATAILAGDALQARAFELLTEL-TECPPHIHLNLLRILTQASGQRGMVGGQLIDLESV 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D+ ID  Q+  I ++KTGAL+  +   GA +  A + + E+L C+G+ +G+ FQ+ DD+L
Sbjct: 180 DKPIDVQQLETIHRLKTGALIRASIAMGATLTGADRQQLEQLDCYGDAIGLAFQVHDDIL 239

Query: 229 DCEEDLP 235
           D E D  
Sbjct: 240 DIEADTA 246


>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
 gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
 gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
 gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
 gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
 gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
          Length = 291

 Score =  207 bits (528), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 85/229 (37%), Positives = 124/229 (54%), Gaps = 10/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFN 66
           +    + +  ++DD L   A+H+    +  LL  ++ Y+LL GGK++R  L    A L  
Sbjct: 1   MARQLQELVAVVDDYL---ATHLAGACDQPLLEKSMAYSLLAGGKRLRPTLTIAVAELLG 57

Query: 67  VN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  +R   A+E IH YSLIHDDLP+MDN  +RRGKPT H  Y    A +AG+GLLT
Sbjct: 58  KTIDDDLVRAACALELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVYGPGVATLAGDGLLT 117

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183
            AFE +S    QLK  +R +L+  L    G  GM+ GQ  D+    + +   Q+  + + 
Sbjct: 118 LAFEWVSD--NQLKAPVRLRLVQELAKAAGPAGMVAGQATDVSATGQELSLAQLKKLHRQ 175

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTGAL+ +A  +G ++A       + L  FGE  G+ FQ+ DD+LD   
Sbjct: 176 KTGALLRYAVLAGGLIAEQETAVLDCLTTFGEAYGLAFQIYDDILDVTA 224


>gi|257466439|ref|ZP_05630750.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917595|ref|ZP_07913835.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691470|gb|EFS28305.1| dimethylallyltransferase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 290

 Score =  207 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 72/235 (30%), Positives = 116/235 (49%), Gaps = 13/235 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
           ++   +  +    ++L Q  +         +   ++YA L GGK+IR  L+    SL   
Sbjct: 1   MKNYREYFNKRFGEVLTQYNT------PVWMAEGMQYACLQGGKRIRPQLLFMTLSLLGK 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+E IH YSL+HDDLP+MDN   RRG+ T H ++ E   I+ G+ LLT A
Sbjct: 55  ERDLGFPFAAALEMIHSYSLVHDDLPAMDNDDYRRGQLTTHKKFGEANGILIGDALLTNA 114

Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
           F  +I     ++      +++   +   G+ GM+GGQ +D     + I    +  I + K
Sbjct: 115 FSVMIRGSMGKVAAEKILEIVALFSEYAGIDGMIGGQAMDVAYAGKQISYKTLTFIHEHK 174

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           TG L+        I+  AS  ++E L  +G+ +G+ FQ+ DD+LD E    +L K
Sbjct: 175 TGRLLLLPILVACILGDASLEQREALESYGKKIGLAFQIKDDILDVEGSFEELGK 229


>gi|190893863|ref|YP_001980405.1| geranyltranstransferase [Rhizobium etli CIAT 652]
 gi|190699142|gb|ACE93227.1| geranyltranstransferase protein [Rhizobium etli CIAT 652]
          Length = 327

 Score =  207 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 118/236 (50%), Positives = 167/236 (70%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N++ I+ +LD LLL  A   +    + L  A+ YA+L GGK++R FLV E 
Sbjct: 29  DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRGAMHYAVLNGGKRLRPFLVVES 88

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   ALR+GAA+EC+HCYSL+HDDLP+MD+  IRRGKPTVH+++DE TAI+AG+
Sbjct: 89  AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDIRRGKPTVHVKFDEATAILAGD 148

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLTYAF+I+++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  
Sbjct: 149 SLLTYAFDIVAAPETALPDTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 208

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD   D  
Sbjct: 209 LQAMKTGALIRFACEAGAILAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAA 264


>gi|313905343|ref|ZP_07838709.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6]
 gi|313469813|gb|EFR65149.1| Polyprenyl synthetase [Eubacterium cellulosolvens 6]
          Length = 298

 Score =  207 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 76/246 (30%), Positives = 122/246 (49%), Gaps = 17/246 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN     + Q+     + I+   L       + +   +L  A+ Y+ L GGK+IR  L+ 
Sbjct: 1   MN--FDEEFQKRKAEAEEIVCRYLPD-----EKEVPGKLTEAMNYSMLAGGKRIRPVLML 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +   +        AAIE IH +SL+HDDLP++D+   RRGK T H  +     ++A
Sbjct: 54  ESYRMCGGDAAVVEPFMAAIEMIHTHSLVHDDLPAIDDDEFRRGKKTTHAAFGAALGVLA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIR-SQLMLSLTHNIGLQGMLGGQMLDIQDEF-----ID 173
           G+ LL YA+E   +     +D  + ++ +  L    G+ GMLGGQ +D+++E      ++
Sbjct: 114 GDALLNYAYETAMTAFDCCQDPAKVARALRVLAQKTGIGGMLGGQSVDVENEKNGVFQLE 173

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-- 231
              +  I   KT AL+      GAI+A A +     ++  G   G+ FQ+ADD+LD    
Sbjct: 174 RKTIDYIYVNKTAALLEAPLMIGAILAGADEKTVSAMQEIGHRAGLAFQIADDVLDVTST 233

Query: 232 -EDLPK 236
            E+L K
Sbjct: 234 LEELGK 239


>gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 292

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 123/238 (51%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+ + + I+  L  +L     +       RL  ++ Y+LL GGK+IR  L      
Sbjct: 2   LKTYLETSKQSIEHWLSAVL-----NSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              V+         A+ECIH YSLIHDDLP+MDN   RRG  T H  Y +  AI+AG+GL
Sbjct: 57  AMKVDASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LTYAF++ S   T      + + +  L    G +GM+GGQ  D+  E   I   ++ ++ 
Sbjct: 117 LTYAFQLCSE-NTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTGAL   A E G I+++A Q +      +   LG++FQ+ DD+LD      +L K
Sbjct: 176 SGKTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGK 233


>gi|325858516|ref|ZP_08172620.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
 gi|325483013|gb|EGC86002.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
          Length = 324

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 17/229 (7%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D ILD +     +    +    L   IRY L LGGK+IR  L+    +LF  +  T L  
Sbjct: 5   DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MD+  +RRG+ TVH+++D  TAI++G+ +L  AFE +    
Sbjct: 65  ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122

Query: 136 T-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
              L+D +R          +    +  GQ  D++ E    + E +   + ++KT  L+  
Sbjct: 123 DRHLRDVLRL-------FTVTALEIGEGQQYDMEFENRNDVTEAEYIEMIRLKTSVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           A + GA++A A   + E L  FGE +G+ FQL DD LD   D     KK
Sbjct: 176 AVKLGALLADAPAGDVENLYKFGERIGLAFQLQDDYLDVYGDPKVFGKK 224


>gi|282916792|ref|ZP_06324550.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139]
 gi|283770598|ref|ZP_06343490.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19]
 gi|282319279|gb|EFB49631.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus D139]
 gi|283460745|gb|EFC07835.1| geranyltranstransferase [Staphylococcus aureus subsp. aureus H19]
          Length = 293

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 94/224 (41%), Positives = 137/224 (61%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHM-QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + ++D++  + +  + ++  + +L  ++ Y+L  GGK+IR  L+       N  +   ++
Sbjct: 7   NKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTEYELGMK 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MDN   RRGK T H  Y E TAI+AG+ LLT AFE+ISS 
Sbjct: 67  SAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSD 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L D ++ +++  L+   G  GM+GGQMLD+Q E   ID   + MI K KTGAL+ FA
Sbjct: 127 D-RLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFA 185

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             S A +A+A    KE L  +  +LG++FQ+ DDLLDC  D  K
Sbjct: 186 VMSAADIANADDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAK 229


>gi|229543903|ref|ZP_04432962.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
 gi|229325042|gb|EEN90718.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
          Length = 289

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/226 (34%), Positives = 126/226 (55%), Gaps = 10/226 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K I+  L   +         +    L  A+ Y+L  GGK+IR  L+    S         
Sbjct: 9   KEIEKHLAQYIADL------RAPAVLKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRG 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           ++   A+E +H YSLIHDDLP+MD+  +RRGKPT H  + E  AI+AG+GLLT++F +I+
Sbjct: 63  MQTACAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
                L D ++ +L+  L  + G +GM+ GQ+ D++ E   +   ++  I   KTG L+ 
Sbjct: 123 E-DPGLDDALKVKLIALLAKSAGPEGMVAGQVADMEGENKTLTLEELQYIHAHKTGKLLR 181

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           F+  +GA++  AS  + E+   F ++LG+ FQ+ DD+LD E +  K
Sbjct: 182 FSVLAGAMIGGASTEQLEKFGQFADHLGLAFQIRDDILDIEGEQEK 227


>gi|312862780|ref|ZP_07723020.1| geranyltranstransferase [Streptococcus vestibularis F0396]
 gi|322516632|ref|ZP_08069546.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124]
 gi|311101640|gb|EFQ59843.1| geranyltranstransferase [Streptococcus vestibularis F0396]
 gi|322124902|gb|EFX96326.1| geranyltranstransferase [Streptococcus vestibularis ATCC 49124]
          Length = 290

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 127/228 (55%), Gaps = 10/228 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69
             ++ID  + D   +    + +     L++AI Y++  GGK+IR  +  +    F +   
Sbjct: 3   KREKIDAAIRDYYQKKNLPVSSD----LITAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            +   V A++E IH  SLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ L    F 
Sbjct: 59  PSHFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187
           +++   T+L   IR QL+ +L++  G  GM+GGQMLD++ E +  D +Q+  I + KTG 
Sbjct: 119 LVAQ--TELSAEIRVQLIQALSYASGTFGMVGGQMLDMKGEDLELDLSQLAKIHENKTGK 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+ F   +  I++       E L+  G  +G+ FQ+ DD+LD   D  
Sbjct: 177 LLTFPFVAAGIVSQQEDRVMENLKEAGRLIGLAFQVRDDILDVTADFE 224


>gi|294827621|ref|NP_710507.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
           serovar Lai str. 56601]
 gi|293385465|gb|AAN47525.2| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 313

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/247 (34%), Positives = 128/247 (51%), Gaps = 18/247 (7%)

Query: 1   MNGGLPSK-LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
           MN    SK         +  L+    QT S +  Q    L  A++Y+L  GGK++R  L 
Sbjct: 1   MNSSSFSKIFHSYKSTFENFLNS---QTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLA 57

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                         L +GA++ECIH YSLIHDDLPSMDN   RRG PT+H ++ E TAI+
Sbjct: 58  LAAFGGLQNETQNVLLLGASLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAIL 117

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-IGLQGMLGGQMLDIQDEFIDETQ- 176
           AG+ L ++AF  IS  + +  D+   + +L + H   G  GM+ GQ+ D+Q E  +  + 
Sbjct: 118 AGDALNSFAFYFISWIRVENGDHFLHRNLLEILHAGCGAPGMVSGQVYDLQMERENVKEN 177

Query: 177 -----------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                      + +  ++KTGAL+  A   G  +    +  +  L  +GE+LG++FQ+ D
Sbjct: 178 DSTNQSDKIEMLQLTHRLKTGALIKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITD 237

Query: 226 DLLDCEE 232
           D+LD E 
Sbjct: 238 DILDVEG 244


>gi|253570683|ref|ZP_04848091.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251839632|gb|EES67715.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 324

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    + +  T+  + L   I Y L LGGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINNHLSENQITRTPEGLYEPIEYILSLGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H ++L+HDDL  MD   +RRGKPTVH  +++ TAI++G+ +L  AF  ++    
Sbjct: 66  TGIEVYHNHTLLHDDL--MDRSDMRRGKPTVHKVWNDNTAILSGDTMLILAFRYVAGCAP 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ LD++ E  +   E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVIDLFSLT------ALEICEGQQLDMEFESRNDVAEDEYIEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI+A AS  + E L  FG  +G+ FQL DDLLD   D     K+
Sbjct: 178 KIGAILAGASAVDAENLYNFGMQIGVAFQLQDDLLDVYGDPEVFGKR 224


>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
           DSM 4136]
          Length = 295

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 9/239 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+  L S L +    +D  LD  +    +         +  A+R++L  GGK++R  L  
Sbjct: 1   MSADLKSYLTQRVAFVDAALDRFVAAAETR-----PVTIHKAMRHSLFAGGKRLRPILCL 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   AL    A+EC+H YSLIHDDLP MD+  +RRG PT H  + E  A++A
Sbjct: 56  AAAEACGGSLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L   +FE+++      + +  + ++L L    G   ++GGQ+ D++ E   +    +
Sbjct: 116 GDALQALSFELVAQTPVTHRHSP-AAMVLELARTAGSLHLVGGQVADLEGEGKKLGIEDL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I + KT AL+  + + G + A A  ++ + L  FG   G+ FQ+ DD+LD  +   K
Sbjct: 175 RYIHESKTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEK 233


>gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
 gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
          Length = 296

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/218 (38%), Positives = 122/218 (55%), Gaps = 7/218 (3%)

Query: 20  LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76
           L  +  +  S +     DR L  A+ Y++  GGK+IR  L+    + F+        +V 
Sbjct: 11  LPAVEKEILSFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS    
Sbjct: 71  AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L ++ +  L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  
Sbjct: 129 HLGNSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALL 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +G I+A   +     L+   E+LG+ FQ+ DDLLD   
Sbjct: 189 AGGILAKQPEEIILLLQRLAEHLGLAFQIRDDLLDVIG 226


>gi|328952416|ref|YP_004369750.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
 gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
          Length = 296

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 93/237 (39%), Positives = 135/237 (56%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L + L E    ID  L+  L       Q     R++ A+RY+LL GGK++R  L    A
Sbjct: 2   DLKTYLSERKTLIDQALECYLPPGNGPGQ-----RVVEAMRYSLLAGGKRLRPILCLAAA 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N    + V  A+E IH YSLIHDDLP+MD+   RRG+PT H ++DE TAI+AG+G
Sbjct: 57  EAVAGNVEQVMPVAGALEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKKFDEATAILAGDG 116

Query: 123 LLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           LLT AFE++++  T    + ++  +++ ++    G QGM+GGQM D+  E       QV 
Sbjct: 117 LLTAAFEVLAAAATNHPAQASVYHEVVQTIARAAGYQGMVGGQMADLLAEGQPSTLEQVE 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            I ++KTGAL+  +  SGA++   S  +   L  +GE  G+IFQ+ DDLLD E +  
Sbjct: 177 AIHRLKTGALLTASVRSGALLGGGSARDILALTHYGEKFGLIFQITDDLLDVEGESA 233


>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
 gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
          Length = 295

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 128/237 (54%), Gaps = 9/237 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            +   L   ++ ++  LDD L       + +   +L  ++RY+ L+GGK++R  L    A
Sbjct: 2   EINDFLVAKAEAVNKALDDYLP-----AEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVA 56

Query: 63  -SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            SLF V     +   AA+E +H YSLIHDDLP MD+   RRG+   H  + +  A+++G+
Sbjct: 57  NSLFGVEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLTYAFE+++  +         ++   +    G +GM+GGQ  D+  E   +++  +  
Sbjct: 117 ALLTYAFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEF 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + KTGAL+  A  +GAI+  A + E   L  + EN+G+ FQ+ DD+LD   D  K
Sbjct: 177 IHRYKTGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEK 233


>gi|74316881|ref|YP_314621.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056376|gb|AAZ96816.1| trans-hexaprenyltranstransferase [Thiobacillus denitrificans ATCC
           25259]
          Length = 343

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 15/234 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L S L ++ + +D ++ + L      ++      + S       GGK++R  LV   A
Sbjct: 25  ESLQSFLADDMRAVDHVIRERLYSDVVLIRQVSEYIINS-------GGKRLRPALVLLSA 77

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F         + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 78  GCFGYRGQAHHELAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDF 135

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + AF+++        DN+    +LS   N   +G +  Q+L+  D  IDE     + +
Sbjct: 136 LYSRAFQMMVG-----VDNMEVMRILSDATNTIAEGEVL-QLLNCHDPDIDEENYLRVIR 189

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KT  L   A   GA++   S+ +K+ L  +G +LG  FQL DD+LD   D  K
Sbjct: 190 YKTAKLFEAAGRLGAVIGGGSEADKDALARYGMHLGTAFQLIDDVLDYSGDFLK 243


>gi|269214464|ref|ZP_06158593.1| geranyltranstransferase [Neisseria lactamica ATCC 23970]
 gi|269209749|gb|EEZ76204.1| geranyltranstransferase [Neisseria lactamica ATCC 23970]
          Length = 292

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 129/235 (54%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +  Q    + + +L+  L       + +    L  A+RYA+L GGK++R  LV   + 
Sbjct: 1   MKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLAASE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L         +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H++Y E TA++ G+ L
Sbjct: 56  LGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTGDAL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            T AF+++S P T+L    +  ++  L    G +GM GGQ +D+ +    + +  +  + 
Sbjct: 116 QTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGRQMPQADLEQMH 174

Query: 182 KMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +KTGAL+  A   G++   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 175 SLKTGALIRAAVVLGSMSCPNLSEDSLAILDDYAAKLGLAFQVIDDVLDCEADTA 229


>gi|223038350|ref|ZP_03608644.1| geranyltranstransferase [Campylobacter rectus RM3267]
 gi|222880207|gb|EEF15294.1| geranyltranstransferase [Campylobacter rectus RM3267]
          Length = 659

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 8/222 (3%)

Query: 17  DTILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH-LTA 72
           D +L +      +H+      +     A+ Y L  GGK  R+ LV    +         A
Sbjct: 378 DALLAEFKAFLGAHLPSNPSFHPCFDEALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAA 437

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             V  A E +H YSLIHDDLP+MD+  +RRG+P++H+++DEVTAI+AG+ L T+AF  I+
Sbjct: 438 FHVALAFETMHSYSLIHDDLPAMDDSDLRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA 497

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
                L  + R + +  L+ N G+ GM  GQ +D   E   +   ++  +   KT  L+ 
Sbjct: 498 RA--PLDADARIKCVEILSRNAGIYGMALGQAVDCYFENQKLGLEELKFLHIHKTARLIA 555

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + ++G ++A   + E  R+   G +LG+ FQ+ADD++D  +
Sbjct: 556 ASLQAGCVVAGLDETEAARIYDIGLDLGLAFQIADDIIDATQ 597


>gi|253566127|ref|ZP_04843581.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945231|gb|EES85669.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 324

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I+Y L +GGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINSHISDIQFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H Y+L+HDDL  MD   +RRGK TVH  +++ TAI++G+ +L  A++ +++  +
Sbjct: 66  TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ +D+  E  +   E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------ALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + GAI+  AS  + E L  FG  +G+ FQL DDLLD   D
Sbjct: 178 KIGAILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGD 217


>gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
           BAA-613]
          Length = 305

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/238 (28%), Positives = 123/238 (51%), Gaps = 13/238 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
                +L   +  I+ ++   L +     +T H   +  A+ Y++  GGK++R  L+ E 
Sbjct: 7   ETFKQELDARTAEIEQLIGTYLPE-----ETGHQKTIFEAMNYSMKAGGKRLRPMLMQEM 61

Query: 62  ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             LF        +   AA+E IH  SL+HDDLP MD+  +RRGK +   +Y E   ++ G
Sbjct: 62  CRLFTGTLLEAVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTG 121

Query: 121 NGLLTYAFEIISSP-KTQLKDNIRSQLMLSL---THNIGLQGMLGGQMLDIQDEF--IDE 174
           + L+ YAFE  ++  +T +  +  S++  ++       G+ GM+GGQ +D++     I  
Sbjct: 122 DALMMYAFETAANAFETSIDPDELSRIGRAMGILARKTGVYGMIGGQTVDVELAGGPIPG 181

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++  I ++KTGAL+  +   GA++  A++ + + +      +G+ FQ+ DD+LD   
Sbjct: 182 DKLEFIYRLKTGALIEASMLIGAVLGGAAEEDCKIVESLAAKIGMAFQIQDDILDVTG 239


>gi|325203376|gb|ADY98829.1| geranyltranstransferase [Neisseria meningitidis M01-240355]
          Length = 298

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E  A++ G
Sbjct: 59  ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           + L T AF++++ P + L  + +  ++  L    G +GM GGQ +D+ +      +  + 
Sbjct: 119 DALQTQAFDVLARP-SGLPASRQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|325131595|gb|EGC54302.1| geranyltranstransferase [Neisseria meningitidis M6190]
          Length = 298

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E  A++ G
Sbjct: 59  ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           + L T AF+++S P T+L    +  ++  L    G +GM GGQ +D+ +      +  + 
Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|325269799|ref|ZP_08136409.1| polyprenyl synthetase [Prevotella multiformis DSM 16608]
 gi|324987772|gb|EGC19745.1| polyprenyl synthetase [Prevotella multiformis DSM 16608]
          Length = 324

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 17/229 (7%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D ILD +     +    +    L   IRY L LGGK+IR  L+    +LF  +  T L  
Sbjct: 5   DEILDKVNEYIGNLSYGRRPQSLYEPIRYVLSLGGKRIRPTLMLLSYNLFRDDPETILSP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MD+  +RRG+ TVH+++D  TAI++G+ +L  AFE +    
Sbjct: 65  ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFERMQQCD 122

Query: 136 T-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
              L+D +R          +    +  GQ  D++ E    + E +   + ++KT  L+  
Sbjct: 123 DRHLRDVLRL-------FTVTALEIGEGQQYDMEFEHRNDVTEAEYIEMIRLKTSVLLAC 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           A + GAI+A A   + + L  FGE +G+ FQL DD LD   D     KK
Sbjct: 176 AMKIGAILADAPSEDMDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 224


>gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 292

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 123/238 (51%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+ + + I+  L  +L     +       RL  ++ Y+LL GGK+IR  L      
Sbjct: 2   LKTYLETSKQSIEHWLSAVL-----NSPIPEYKRLYESMNYSLLQGGKRIRPILTKAVLD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              V+         A+ECIH YSLIHDDLP+MDN   RRG  T H  Y +  AI+AG+GL
Sbjct: 57  AMKVDASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LTYAF++ S   T      + + +  L    G +GM+GGQ  D+  E   I   ++ ++ 
Sbjct: 117 LTYAFQLCSE-NTTASAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KTGAL   A E G I+++A Q +      +   LG++FQ+ DD+LD      +L K
Sbjct: 176 SGKTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGK 233


>gi|303326969|ref|ZP_07357411.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
 gi|302862957|gb|EFL85889.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
          Length = 297

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 124/235 (52%), Gaps = 12/235 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           + + L+   + ++T L   L             RL  ++ Y+L  GGK++R  L   CA+
Sbjct: 7   MKALLKSRGREVETYLSACLD------GRPMPPRLKESMLYSLQAGGKRLRPVLCLSCAA 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  +    AL   AAIE IH YSLIHDDLP+MD+  +RRGKP+ H  +DE TAI+AG+GL
Sbjct: 61  LCGLEPQKALPFAAAIEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---I 180
           LT AF I+   +  +  +   + +  L    G  GM+GGQ  D+      +  +     +
Sbjct: 121 LTDAFVIM--CRAPVPPDRLLRAVAELALAAGASGMVGGQEWDMIYTGRSQVSLEELRGM 178

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             MKTGAL+  +C  G ++A         +  FG +LG+ FQ+ADD+LD   D  
Sbjct: 179 HAMKTGALLRASCVCGGLLAGVDDKALRAISNFGSSLGVAFQIADDILDVVADTA 233


>gi|283781730|ref|YP_003372485.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
 gi|283440183|gb|ADB18625.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
          Length = 296

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 9/237 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +  +E SK + + +DD L+ T +         L  AIR++LL   K++R  LV       
Sbjct: 5   ADFRELSKTLRSEVDDALVAT-TEYGPDVPTHLAEAIRHSLLAPAKRLRPLLVLIACEAC 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   A+    A+E IH YSLIHDDLP+MD+  +RRG+P+ H ++ E T I+AG+ LL 
Sbjct: 64  GYDRSKAMPAAVAVELIHTYSLIHDDLPAMDDDDMRRGRPSCHAKFGESTGILAGDALLA 123

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKM 183
            AFE++++    L   + ++ +  L    G   ++GGQ  D+  EF D     +  I + 
Sbjct: 124 QAFEVLAAD--HLPGPVVAKCVKELAVAAGAANLVGGQHDDLGAEFADLGLASLEAIHRR 181

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           KTGA++C +   GAI+A AS      L  +GE LG+ FQ+ DDLLD E D   + K+
Sbjct: 182 KTGAMICVSLRLGAIIAGASSEVLTALSQYGERLGLAFQIVDDLLDLEGDQQLMGKR 238


>gi|305665579|ref|YP_003861866.1| putative isoprenoid biosynthesis related protein [Maribacter sp.
           HTCC2170]
 gi|88710335|gb|EAR02567.1| putative isoprenoid biosynthesis related protein [Maribacter sp.
           HTCC2170]
          Length = 334

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 13/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ID    + +     + +T+    L   + Y L LGGK++R  L      +F  +H+ A+ 
Sbjct: 14  IDFYRTEFISYLEKNAKTREPLNLYKPMSYILGLGGKRLRPVLTLMTTEVFGKDHINAMD 73

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE  H +SL+HDD+  MD+  +RRGKPTVH ++D  T I++G+ +L  A+++  + 
Sbjct: 74  AALAIEIFHNFSLVHDDI--MDDAPLRRGKPTVHEKWDLNTGILSGDAMLIRAYQLFENY 131

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCF 191
           ++           L+   +     +  GQ  DI  E  ++    +   + + KT  L+  
Sbjct: 132 ESDTFRE------LAQLFSKTALEVCEGQQYDIDFETREDVTVPEYLKMIEYKTAVLVAA 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A + G I+A+AS  +++ +  FG+NLG+ FQL DD LD   D PK
Sbjct: 186 AMKMGGIIANASSTDQDCIYDFGKNLGLAFQLQDDYLDAFGD-PK 229


>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
 gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
          Length = 297

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 112/234 (47%), Gaps = 9/234 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L   S   +  L     +    +      RL  A+ Y+LL GGK++R  L    A
Sbjct: 2   DFKEELSCRSAFFERSLRTFCEEERRRIPA----RLREAMNYSLLAGGKRLRPILCMAGA 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +      + L +  A E  H  SLIHDDLP MDN  +RRGKPT H+ Y E  A++AG+ 
Sbjct: 58  EIMGEKAESVLPMATAFEMAHTASLIHDDLPCMDNDSLRRGKPTNHVVYGESLALLAGDA 117

Query: 123 LLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
           L   AFE   +   K   +     + +      +G +G+ GGQ    D   +  +   V 
Sbjct: 118 LFLDAFETALAGLLKNGAEPQRCVRALALFAQALGPEGICGGQVLDTDRASQTDERDFVV 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  MKT  L+  +  +GAI+A A      RL  +GEN+G+ FQ+ADDLLDC  
Sbjct: 178 DVASMKTMVLIRASLCAGAILAGADGEALRRLMKYGENVGLAFQIADDLLDCTG 231


>gi|163797801|ref|ZP_02191747.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
 gi|159176923|gb|EDP61489.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
          Length = 295

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/235 (37%), Positives = 134/235 (57%), Gaps = 8/235 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
            L + L E ++ ++ ++D LL Q           RL SA+R+ A  GGK++R FLV + A
Sbjct: 3   DLQAALAECAEDVERMMDLLLPQPEGA-----EARLYSAMRHSAFAGGKRLRPFLVMQSA 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F V+   A RV AA+E +H YSLIHDDLP+MD+  +RRG+ + H ++DE TAI+AG+ 
Sbjct: 58  RQFGVDRRCAARVAAAVEFMHTYSLIHDDLPAMDDADMRRGRTSCHKEFDEATAILAGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMI 180
           L   AFE +  P+T     +R++L+  L    G +GM GGQM+D+  E  +     +  +
Sbjct: 118 LQALAFETLVMPETHSDPAVRAELVRDLARASGGRGMCGGQMMDLLAESTEMDIGAITRL 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q++KTG +  F+  SGAI+          L  + +  G+ FQ+ DDLLD   D  
Sbjct: 178 QRLKTGEMFAFSAVSGAILGKGPYRAYMALHNYAQEFGLAFQIVDDLLDATGDSE 232


>gi|150398316|ref|YP_001328783.1| polyprenyl synthetase [Sinorhizobium medicae WSM419]
 gi|150029831|gb|ABR61948.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419]
          Length = 304

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 117/236 (49%), Positives = 165/236 (69%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
              P +L+ N+  ++ +L+ LL       +      LL A+R+A+L GGK++R FLV+E 
Sbjct: 6   SSFPERLKSNAVAVEALLETLLDPAVRGGEISRPANLLEAMRHAVLNGGKRLRPFLVSET 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   ALR+GAA+ECIHCYSL+HDDLP+MDN  +RRGKPTVH+ +DE TAI+AG+
Sbjct: 66  AALLGGDVQAALRIGAALECIHCYSLVHDDLPAMDNDDMRRGKPTVHVAFDEATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLT++F+II++P+T L D  ++ L+L+L    G  GM GGQ LD+  E    DET + +
Sbjct: 126 SLLTFSFDIIAAPETALSDRQKTALVLALARAAGHGGMAGGQALDLAAEKSAPDETGIVL 185

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GAI+A A+  +++RLR FGE +G+ FQLADDLLD   D  
Sbjct: 186 LQSMKTGALLRFACEAGAIIADAAAEDRQRLRAFGEKIGLAFQLADDLLDLTADAA 241


>gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
 gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
          Length = 300

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 113/209 (54%), Gaps = 5/209 (2%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q   +  LL A++Y  LLGGK+ R FL      +  +         AA+ECIH YSLIHD
Sbjct: 29  QPFADKALLKAMQYGTLLGGKRARPFLTYVTGEMLGLTQDDLDTPAAAVECIHAYSLIHD 88

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLS 149
           DLP+MD+   RRG+PT HI +DE  AI+AG+ L T AF+I++S +     N  R  ++  
Sbjct: 89  DLPAMDDDAFRRGQPTCHIAFDEAMAILAGDALQTLAFDILASGQLSQDGNTQRIAMVSE 148

Query: 150 LTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NE 206
           L    G  GM  GQ   LD + + +   Q+ +I + KTGAL+  A   GA+ A       
Sbjct: 149 LAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGDKGVAI 208

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +L  + E +G+ FQ+ DD+LD   D  
Sbjct: 209 LPQLDKYSEAIGLAFQVQDDILDVISDTE 237


>gi|320528396|ref|ZP_08029558.1| putative geranyltranstransferase [Solobacterium moorei F0204]
 gi|320131310|gb|EFW23878.1| putative geranyltranstransferase [Solobacterium moorei F0204]
          Length = 278

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 8/213 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL+  +++++  +    SA+ Y+L  GGK+IR  L+      ++V+         A+E
Sbjct: 4   ELLLE--NYIKSLPDSTTKSAMLYSLTAGGKRIRPQLLYTVLKGYSVDPEIGNPFACALE 61

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRG PT H Q++E TAI+AG+GLLTYAFEI  +  +    
Sbjct: 62  MIHTYSLIHDDLPAMDNDDLRRGLPTCHKQFNEATAILAGDGLLTYAFEI--AAGSNENS 119

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI 198
               + +  L+   G  GM+ GQ LD++ E+  ID   +  I + KTG L+         
Sbjct: 120 GTVLKCISILSKMAGPSGMVYGQQLDLEAEYKEIDWDMLQRIHEHKTGCLLTAPLLIACT 179

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +A   + +    +  G +LG+ FQ+ DD+LD E
Sbjct: 180 LAKH-EEDISAWKKIGFSLGLAFQIQDDILDIE 211


>gi|150004490|ref|YP_001299234.1| putative isoprenoid biosynthesis related protein [Bacteroides
           vulgatus ATCC 8482]
 gi|149932914|gb|ABR39612.1| putative isoprenoid biosynthesis related protein [Bacteroides
           vulgatus ATCC 8482]
          Length = 325

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D +L+ +    A+    +    L + I Y L LGGK+IR  L+     L+  N    L  
Sbjct: 6   DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE  H Y+L+HDDL  MD   +RR KPTVH  +DE TAI++G+ +L  A+ ++++  
Sbjct: 66  AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNC- 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192
                    + ++ +     L  +  GQ  D++ E  ++    +   + ++KT  L+  A
Sbjct: 123 ----PERYLRQVMDIFSQTAL-EICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAA 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + GA++  AS+++  +L  FG  +G+ FQL DD LD   D  
Sbjct: 178 LKIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220


>gi|265766878|ref|ZP_06094707.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263253255|gb|EEZ24731.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 324

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I+Y L +GGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINSHISDIQFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H Y+L+HDDL  MD   +RRGK TVH  +++ TAI++G+ +L  A++ +++  +
Sbjct: 66  TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ +D+  E  +   E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------ALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + GAI+  AS  + E L  FG  +G+ FQL DDLLD   D
Sbjct: 178 KIGAILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGD 217


>gi|73668941|ref|YP_304956.1| dimethylallyltranstransferase / geranyltranstransferase
           [Methanosarcina barkeri str. Fusaro]
 gi|72396103|gb|AAZ70376.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Methanosarcina barkeri str. Fusaro]
          Length = 321

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 17/229 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  ++++ S  +D  +D+LL          H + L  A RY +  GGK++R  ++   A 
Sbjct: 3   LVDEIKKRSVHVDAAIDELL-------PVAHPEELYKASRYLVDAGGKRLRPAVLILAAE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +  + L    A+E +H ++LIHDD+  MD   IRRG P VH  + +  AI+AG+ L
Sbjct: 56  ATGSDLKSVLPAAVAVELVHNFTLIHDDI--MDKDDIRRGMPAVHTIWGDAGAILAGDTL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
            + AFEI+S  + +    ++   ++S T       +  GQ LD+  E    + + +   +
Sbjct: 114 YSKAFEILSKVQNEPARILKCMDVISKT----CTEICEGQWLDMDFEKREKVSKAEYIEM 169

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + KT  L   A + GA++  AS      L  +G  +GI FQ+ DD+LD
Sbjct: 170 VEKKTSVLYAAAAKIGALLGGASDEIAAALSEYGRFIGIGFQMYDDVLD 218


>gi|153870661|ref|ZP_02000013.1| Polyprenyl synthetase [Beggiatoa sp. PS]
 gi|152072868|gb|EDN69982.1| Polyprenyl synthetase [Beggiatoa sp. PS]
          Length = 296

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/234 (35%), Positives = 131/234 (55%), Gaps = 10/234 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L   +    +R+++ LD  L      M T     L  A+RY++  GGK++R  LV    
Sbjct: 2   SLELLMTTYRQRVESALDTWLP-----MTTIQPIHLHEAMRYSVFNGGKRVRPLLVYLTG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +  NVN ++     +A+E IH YSL+HDDLP+MD+  +RRGKPT H  +DE TAI+AG+ 
Sbjct: 57  AALNVNPISLDAPASAVELIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDA 116

Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFM 179
           L T AF ++S     Q  D  R +++ +L    G +GM GGQ +D++         ++  
Sbjct: 117 LQTLAFYVLSHDNNLQNSDKRRLEMIETLALASGSRGMAGGQAIDMESVGRSLNVAELEN 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KTGAL+  + + GA+  +  + N+ E+L  + + +G+ FQ+ DD+LD E 
Sbjct: 177 MHIHKTGALIRASVKMGALACNVIEVNQLEKLDHYAKCIGLAFQIQDDILDVES 230


>gi|53715029|ref|YP_101021.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46]
 gi|52217894|dbj|BAD50487.1| putative isoprenyl synthetase [Bacteroides fragilis YCH46]
 gi|301164456|emb|CBW24014.1| putative isoprenoid biosynthesis related protein [Bacteroides
           fragilis 638R]
          Length = 324

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I+Y L +GGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINSHISDIRFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H Y+L+HDDL  MD   +RRGK TVH  +++ TAI++G+ +L  A++ +++  +
Sbjct: 66  TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ +D+  E  +   E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------ALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + GAI+  AS  + E L  FG  +G+ FQL DDLLD   D
Sbjct: 178 KIGAILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGD 217


>gi|86359590|ref|YP_471482.1| geranyltranstransferase protein [Rhizobium etli CFN 42]
 gi|86283692|gb|ABC92755.1| geranyltranstransferase protein [Rhizobium etli CFN 42]
          Length = 331

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 117/236 (49%), Positives = 169/236 (71%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N+++I+ +L  LL   A   +    + L SA+ YA+L GGK++R FLV E 
Sbjct: 33  DTFETRLKNNARKIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVAES 92

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVH+++DE TAI+AG+
Sbjct: 93  AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHVKFDEATAILAGD 152

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLTYAF+I+++P+T L D+ ++ L+L+L    GL GM GGQ LD+  E    DET +  
Sbjct: 153 SLLTYAFDIVAAPETALPDSSKASLVLALARAAGLGGMAGGQALDLAAEKKAPDETGIIR 212

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GAI+A + Q++++RLR FGE +G+ FQLADD+LD   D  
Sbjct: 213 LQAMKTGALIRFACEAGAIIAGSPQDDRQRLRAFGEKIGLAFQLADDILDLTSDAA 268


>gi|60682991|ref|YP_213135.1| putative isoprenoid biosynthesis-like protein [Bacteroides fragilis
           NCTC 9343]
 gi|60494425|emb|CAH09221.1| putative isoprenoid biosynthesis related protein [Bacteroides
           fragilis NCTC 9343]
          Length = 324

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 12/220 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   I+Y L +GGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINSHISDIRFTRTPAGLYDPIKYVLSMGGKRIRPVLMLMAYNLYKEDVSSIYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H Y+L+HDDL  MD   +RRGK TVH  +++ TAI++G+ +L  A++ +++  +
Sbjct: 66  TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMLVLAYQYMAASSS 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ +D+  E  +   E +   + ++KT  L+  + 
Sbjct: 124 EHLKEVMDLFSLT------ALEICEGQQMDMNFESREDVKEEEYLEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + GAI+  AS  + E L  FG  +G+ FQL DDLLD   D
Sbjct: 178 KIGAILGGASPEDAENLYDFGMQIGVAFQLQDDLLDVYGD 217


>gi|319953302|ref|YP_004164569.1| geranyltranstransferase [Cellulophaga algicola DSM 14237]
 gi|319421962|gb|ADV49071.1| Geranyltranstransferase [Cellulophaga algicola DSM 14237]
          Length = 324

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 13/227 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           +RI+   ++ +       + +    L   I Y L LGGK++R  L    A +F  ++  A
Sbjct: 2   QRIEDYREEFIAYLEEKSKLKEPINLYEPITYILSLGGKRLRPILTLMTADIFGADYKKA 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E  H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++  
Sbjct: 62  LDAALAVEVFHNFSLVHDDI--MDDAPLRRGKATVHEKWDINTGILSGDAMLITAYQLFE 119

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALM 189
           + + ++  +      L+   +     +  GQ  D+  E  D+    +   + + KT  L+
Sbjct: 120 NYEGEVFRS------LAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLV 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A + GAI+A+AS   ++ +  FG NLGI FQL DD LD   D PK
Sbjct: 174 GAAMKMGAIIANASTEGQDSIYEFGRNLGIAFQLQDDYLDAFGD-PK 219


>gi|268608471|ref|ZP_06142198.1| Polyprenyl synthetase [Ruminococcus flavefaciens FD-1]
          Length = 297

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 12/242 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
                K  E    ++  L       A   +T+    L+ A+ Y+L  GGK+IR  LV   
Sbjct: 2   SDFKEKFSEYISLVEENLRKY---NAHSPETEAQKDLIEAMNYSLEAGGKRIRPVLVYAF 58

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +    +   A    AAIE IH +SLIHDDLP+MD+   RRG+ + H  + E  AI+AG+
Sbjct: 59  CNALGGDTGNAAAPAAAIEMIHTFSLIHDDLPAMDDDDYRRGRLSCHKAHGEAMAILAGD 118

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
            L    F +I+  +  L    + +++  L   +G  GM+GGQ++D+Q+E    +DE  + 
Sbjct: 119 ALSVLPFGLIADDEK-LSPEQKIRIISELARAVGKNGMIGGQVIDMQNEQRNDVDEANLR 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDC---EEDL 234
            + + KTG L+  +C  G I A  + +   E  + +G  LG+ FQ+ DD+LD     E+L
Sbjct: 178 NMYRHKTGELISVSCIMGCICAGCTDSTIIEAAKEYGYKLGLAFQIIDDILDVTSTTEEL 237

Query: 235 PK 236
            K
Sbjct: 238 GK 239


>gi|45656187|ref|YP_000273.1| farnesyl-diphosphate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599421|gb|AAS68910.1| geranyltranstransferase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 332

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/224 (36%), Positives = 122/224 (54%), Gaps = 14/224 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L  QT S +  Q    L  A++Y+L  GGK++R  L               L +GA++EC
Sbjct: 40  LNSQTLSILSKQSAPELFEAMKYSLVAGGKRLRPVLALAAFGGLQNETQNVLLLGASLEC 99

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLPSMDN   RRG PT+H ++ E TAI+AG+ L ++AF  IS  + +  D+
Sbjct: 100 IHTYSLIHDDLPSMDNDDFRRGLPTLHKKFSESTAILAGDALNSFAFYFISWIRVENGDH 159

Query: 142 IRSQLMLSLTHN-IGLQGMLGGQMLDIQDEFIDETQ------------VFMIQKMKTGAL 188
              + +L + H   G  GM+ GQ+ D+Q E  +  +            + +  ++KTGAL
Sbjct: 160 FLHRNLLEILHAGCGAPGMVSGQVYDLQMERENVKENDLTNQSDKIEMLQLTHRLKTGAL 219

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  A   G  +    +  +  L  +GE+LG++FQ+ DD+LD E 
Sbjct: 220 IKSALLLGNRLRKDWKKRETSLSQYGEDLGLLFQITDDILDVEG 263


>gi|302874811|ref|YP_003843444.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
 gi|307690572|ref|ZP_07633018.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
 gi|302577668|gb|ADL51680.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
          Length = 290

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 8/229 (3%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           +    ID  L++  +    + +T     +  ++ Y+L +GGK+IR  L     SLF    
Sbjct: 5   KYKDSIDKWLENYFISKDGYEKT-----IYDSMSYSLNIGGKRIRPLLFLYTYSLFKDEI 59

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L +  AIE IH YSLIHDDLP+MD+  +RRG PT HI+Y +  AI+AG+GLL  A  
Sbjct: 60  DDVLDIAGAIEMIHTYSLIHDDLPAMDDDDLRRGMPTNHIKYGDAIAILAGDGLLNEAMN 119

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           I+     + +  +  +    ++ + G  GM+ GQ++DI+ E   I   ++  +   KTGA
Sbjct: 120 IMFQYCIESESQLAVKACSYISKSAGAAGMIAGQIVDIESEGKKISIEKLKYMHSKKTGA 179

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  A  S AI+A A   E E+L  +G  LG+ FQ+ DD+LD   D  K
Sbjct: 180 LINAAIVSAAILAGADSTEIEKLSEYGTKLGLAFQIKDDVLDVIGDESK 228


>gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
           HTCC2255]
 gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
           HTCC2255]
          Length = 291

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/235 (37%), Positives = 141/235 (60%), Gaps = 16/235 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L + +  ++  L ++L       Q Q ND + + IR+A+L GGK++R+FLV    
Sbjct: 3   NFNVQLNDTASIVEIALKEML-------QKQGNDLMSAPIRHAVLNGGKRLRAFLVIHSC 55

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F V   TA++   AIEC+H YSL+HDDLP MD+  +RRGKPTVH+++DE TA + G+ 
Sbjct: 56  NIFEVQKDTAIQAAIAIECLHAYSLVHDDLPCMDDDELRRGKPTVHVKWDEATATLTGDA 115

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVF 178
           L   AFE+I+S        I  +L+  L    G+QGM+ GQ  DIQ E     ++   + 
Sbjct: 116 LQALAFELIASLPNTDAIRI-VELLKKLAKASGMQGMVLGQAQDIQAEKSEVNLNINDIT 174

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +Q+ KTGAL+ ++  SGAI+++       +L  + +++G+ FQ+ DD+LD E D
Sbjct: 175 SLQQNKTGALIEWSAISGAILSNHDD---RKLLDYAKSIGLAFQIQDDILDIEGD 226


>gi|316985189|gb|EFV64141.1| putative geranyltranstransferase [Neisseria meningitidis H44/76]
 gi|325135064|gb|EGC57692.1| geranyltranstransferase [Neisseria meningitidis M13399]
 gi|325141097|gb|EGC63600.1| geranyltranstransferase [Neisseria meningitidis CU385]
 gi|325199464|gb|ADY94919.1| geranyltranstransferase [Neisseria meningitidis H44/76]
          Length = 298

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/238 (35%), Positives = 125/238 (52%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKTWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E TA++ G
Sbjct: 59  ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           + L T AF+++S P T+L    +  ++  L    G +GM GGQ +D+ +      +  + 
Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA      S  E   L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235


>gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 341

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 130/243 (53%), Gaps = 8/243 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
           ++  L + ++E   R++  L+  +   A   +       L+ A+RYA+L GGK++R  LV
Sbjct: 35  VDFELDTWMRERLDRVERALEAWITADAPQGVDHGAPAALVDAMRYAVLDGGKRLRPLLV 94

Query: 59  TEC----ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
                  A L +     ALR   A+E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ E 
Sbjct: 95  LAAHEAVAELGHGCDAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEA 154

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172
           +A++AG+ L   AFE ++     +   ++++L   L    G  GM GGQ +D+      +
Sbjct: 155 SALLAGDALQALAFEFLTPLDGSVPCTVQARLCGLLARAAGSSGMAGGQAIDLASVGLPL 214

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E Q+  + ++KTGAL+  +   GA  A  +      L  +G  +G+ FQ+ DD+LD   
Sbjct: 215 TENQLREMHQLKTGALLQGSVVMGAQCAQPTAQVLSGLEAYGAAIGLAFQVVDDILDVTA 274

Query: 233 DLP 235
           D  
Sbjct: 275 DSA 277


>gi|149184810|ref|ZP_01863128.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
 gi|148832130|gb|EDL50563.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
          Length = 296

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/239 (39%), Positives = 137/239 (57%), Gaps = 8/239 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M   L     +  + +D   D  L      +      RL+ A+RYA + GGK++R  LV 
Sbjct: 1   MPDLLSDAFDQVQQDVDAAFDAYLP-----VPQDTRGRLVEAMRYAAIGGGKRVRPLLVC 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A LF V+   A+  G A+E IH YSLIHDDLP MD+  +R GKPT+H  YDE TA++A
Sbjct: 56  ATAKLFGVDRDAAVAAGCAVEAIHAYSLIHDDLPCMDDDDLRHGKPTLHKVYDEATAVLA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
           G+ L   AF+I++ P       +R++L+ +L    G +GM GGQM+DI   +E  D  QV
Sbjct: 116 GDCLHALAFDILTMPGISNDPFVRAELVATLAKASGHEGMAGGQMMDIVSDEEEYDIRQV 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +Q++KTGAL+  + E GA++       +  LR +  ++G+ FQ+ADDLLD E D  K
Sbjct: 176 TRLQQLKTGALLAASVEMGAVLGKLPPEGRTHLRAYARDIGLAFQIADDLLDVEGDETK 234


>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 310

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVT 59
           N  L +        I+  LD+ +         +H   +  A+RY++L  G K+    +  
Sbjct: 33  NFDLRTYWTTLITEINQKLDEAI-------PVKHPAGIYEAMRYSVLAQGAKRASPVMCV 85

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF  + L A     A+E +H  SLIHDDLP MD+  +RRGKP+ H  Y    A++A
Sbjct: 86  AACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGIALLA 145

Query: 120 GNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           G+ L    F  I S  P   +      +++  +   +G  GM  GQ +D++      +  
Sbjct: 146 GDALFPLGFHHIVSHTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDLEGGPFPPS-- 203

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             +Q+ K GA+   +   G ++  A+++E E LR +G  +G+++Q  DD+
Sbjct: 204 -FVQEKKFGAMGECSAVCGGLLGGATEDELESLRRYGRAVGMLYQAVDDI 252


>gi|91774308|ref|YP_567000.1| farnesyltranstransferase [Methanococcoides burtonii DSM 6242]
 gi|91713323|gb|ABE53250.1| Bifunctional short chain isoprenyl diphosphate synthase
           [Methanococcoides burtonii DSM 6242]
          Length = 322

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 17/230 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            L  ++++ S  +D  + + L          H + L  A RY    GGK++R  ++    
Sbjct: 2   DLMDEIKKRSVYVDKGIGEFL-------PISHPEELYRASRYLPDAGGKRLRPAVLMLST 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                + ++ +    A+E +H ++L+HDD+  MDN  +RRG P VH+++    AI+AG+ 
Sbjct: 55  EAVGGDPMSVIPAAVALELVHNFTLVHDDI--MDNDDVRRGMPAVHVKWGSEGAILAGDT 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFM 179
           L + AFEI+S  +   +  ++   +LS T       +  GQ +DI+ E  D   E +   
Sbjct: 113 LYSKAFEILSVMEKDPERILKCVALLSRT----CTEICEGQWMDIEFENRDTVSEEEYLE 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + + KT  L   A + GA++  AS    + +  FG  +GI FQ+ DD++D
Sbjct: 169 MVEKKTSVLYGAAAKVGALLGGASDEVADAMYEFGRLVGISFQIQDDVID 218


>gi|300726785|ref|ZP_07060215.1| polyprenyl synthetase [Prevotella bryantii B14]
 gi|299775898|gb|EFI72478.1| polyprenyl synthetase [Prevotella bryantii B14]
          Length = 324

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 75/224 (33%), Positives = 117/224 (52%), Gaps = 13/224 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           + ILD +          +    L   IRY L +GGK+IR  L+    +LF  +  + L  
Sbjct: 5   NEILDKVNDYLNKLPYDRKPVSLYEPIRYVLSIGGKRIRPTLMLLAYNLFKEDPESILMS 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MD   +RRGK TVH +++  TAI++G+ +L  A++ + + K
Sbjct: 65  ACALETYHNYTLLHDDL--MDQADLRRGKETVHKKWNANTAILSGDSMLVLAYQRMLNCK 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
            + +  +  +L       IG      GQ  D++ E    + E +   + ++KT  L+  A
Sbjct: 123 PEYQGKVL-KLFTETALEIG-----EGQQYDMEFETRMDVVEEEYIEMIRLKTSVLLACA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + GAI+A AS  + + L  FGE +G+ FQL DD LD   D PK
Sbjct: 177 MKIGAILADASDEDADNLYKFGEQIGLAFQLQDDYLDVYGD-PK 219


>gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
           lactis subsp. lactis CV56]
          Length = 285

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/224 (37%), Positives = 121/224 (54%), Gaps = 11/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77
           L+D L +   +   +    L  + +Y+LL GGK+IR  L       F++    A   V A
Sbjct: 8   LEDFLTEF--YESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ L    F I+S+    
Sbjct: 66  ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTA--D 123

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
           L   I   L   L    G  GM+ GQ+LD+  E   +   ++  I ++KTG L+ F   +
Sbjct: 124 LSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVA 183

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             I+A  S +E E+LR  G+ LG+ FQ+ DD+LD      +L K
Sbjct: 184 AGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDVTATFAELGK 227


>gi|294778249|ref|ZP_06743675.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
 gi|294447877|gb|EFG16451.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
          Length = 325

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D +L+ +    A+    +    L + I Y L LGGK+IR  L+     L+  N    L  
Sbjct: 6   DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE  H Y+L+HDDL  MD   +RR KPTVH  +DE TAI++G+ +L  A+ ++++  
Sbjct: 66  AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNC- 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192
                    + ++ +     L  +  GQ  D++ E  ++    +   + ++KT  L+  A
Sbjct: 123 ----PERYLKQVMDIFSQTAL-EICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAA 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + GA++  AS+++  +L  FG  +G+ FQL DD LD   D  
Sbjct: 178 LKIGAVLGGASEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220


>gi|281491351|ref|YP_003353331.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375092|gb|ADA64610.1| Dimethylallyltransferase/geranyltranstransferase [Lactococcus
           lactis subsp. lactis KF147]
          Length = 285

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/224 (37%), Positives = 121/224 (54%), Gaps = 11/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77
           L+D L +   +   +    L  + +Y+LL GGK+IR  L       F++    A   V A
Sbjct: 8   LEDFLTEF--YESAEFPTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAA 65

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ L    F I+S+    
Sbjct: 66  ALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTA--D 123

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
           L   I   L   L    G  GM+ GQ+LD+  E   +   ++  I ++KTG L+ F   +
Sbjct: 124 LSAEIIVALTRELAFASGSYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVA 183

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             I+A  S +E E+LR  G+ LG+ FQ+ DD+LD      +L K
Sbjct: 184 AGIVAQKSTDEVEKLRQVGQILGLAFQIRDDILDVTATFAELGK 227


>gi|56416957|ref|YP_154031.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma
           marginale str. St. Maries]
 gi|222475323|ref|YP_002563740.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Florida]
 gi|56388189|gb|AAV86776.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Anaplasma
           marginale str. St. Maries]
 gi|222419461|gb|ACM49484.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Florida]
          Length = 291

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 88/229 (38%), Positives = 126/229 (55%), Gaps = 4/229 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S +Q+  +   +++   L Q         +  L  A+ Y +   GK IRSFL +  A +F
Sbjct: 11  SDIQQKVEDFASLVQKELAQVVHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVF 70

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V+    LR+ AAIE +H YSL+HDDLPSMDN  IRRGK + HI++ E  A++ GN LLT
Sbjct: 71  GVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLT 130

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMK 184
             FE++S+        +R +++  L+   G  GM+ GQMLD++         V  I ++K
Sbjct: 131 LTFELLSTMNEGCA--VRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELK 188

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   ACE+GA++  AS  E+  L  +G  LG  FQ  DDL D  ED
Sbjct: 189 TARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 237


>gi|238765452|ref|ZP_04626373.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638]
 gi|238696346|gb|EEP89142.1| Geranyltranstransferase [Yersinia kristensenii ATCC 33638]
          Length = 299

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +RI+  L D +           N  L+ A+RY A+LGGK++R +LV    
Sbjct: 2   DFNQQLAAHQQRINQALLDYIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++  +     AAIEC+H YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 57  QMFGLSLTSLDAPAAAIECVHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P  ++ D  R  ++  L +  G+ GM GGQ LD++ E   I   ++  
Sbjct: 117 LQTLAFSILAEAPMPEVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQITLDELER 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A          L  +   +G+ FQ+ DD+LD   D   + 
Sbjct: 177 IHRHKTGALIRAAVRLGALAAGTPGREVLPLLDRYANAIGLAFQVQDDILDVIGDTATIG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68]
 gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
 gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
          Length = 289

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 9/228 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-L 73
           + + L  L    A   Q Q  +RL  ++ Y+L  GGK+IR  L+      F +    A  
Sbjct: 2   VASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +V A +E IH  SLIHDDLP+MDN   RRG+ T H  YDE TAI+AG+ L    F  ++ 
Sbjct: 62  QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
               L       L+  L+   G  GM+ GQ+LD+  E   +   Q+  I   KTG L+ F
Sbjct: 122 --VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTF 179

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
              +  ++A  S      LR  G+ +G+ FQ+ DD+LD     E++ K
Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTTTFEEIGK 227


>gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 300

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 133/237 (56%), Gaps = 13/237 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S L++    I+  L   + +       QH      A+ Y+LL GGK++R+ L    A+LF
Sbjct: 10  SILKQRVTLIEDFLKTCIQENNISSTLQH------AMNYSLLAGGKRLRAVLCISSAALF 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +++  + L   A IE IH YSLIHDDLP+MD+   RRGKP+ H  ++E  AI+AG+ LLT
Sbjct: 64  DLSPTSILPFAAGIEMIHTYSLIHDDLPAMDDDDFRRGKPSCHKAFNEALAILAGDALLT 123

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQK 182
            AF  +S+  + +  N     +  +    G  GM+ GQ +DI+   + +     + +I +
Sbjct: 124 DAFTFMSTLNSIVPSNNILVAIHEIAQAAGSNGMVKGQSMDIEHTGVSDVSFNTLCIIHE 183

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            KTGAL   +C +GA++A A+++    L+C+GE LG  FQ+ DD+L+   D   L K
Sbjct: 184 YKTGALFRASCTTGAMLAGANESAIYALKCYGEALGAAFQITDDILNVTADSITLGK 240


>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
          Length = 314

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 12/236 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           +      L   +  ++  LD         M     +RL  ++RY+ L GGK++R  L   
Sbjct: 19  SFDFQRYLSARADAVNDALDR-------AMPRGFPERLCESMRYSVLAGGKRVRPVLALA 71

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L   +   A  V  A+E IH  SLIHDD+P MD+  +RRG+P+ H+ + E TA++AG
Sbjct: 72  ACELVGGDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAG 131

Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQ 176
           + L   AFE ++       +  +   + +  L    G  G+  GQ+ D + E +      
Sbjct: 132 DALHALAFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAM 191

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  I   KT  L+  A  SGAI+   +  E ER+R +   +G++FQ+ DD+LD   
Sbjct: 192 LEYIHVHKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTS 247


>gi|285019214|ref|YP_003376925.1| geranylgeranyl pyrophosphate synthase [Xanthomonas albilineans GPE
           PC73]
 gi|283474432|emb|CBA16933.1| putative geranylgeranyl pyrophosphate synthase protein [Xanthomonas
           albilineans]
          Length = 293

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 9/230 (3%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64
            +      +R++  LD  L   A     Q   RL +A+R+A L GGK++R  LV    +L
Sbjct: 4   EAVFARWRQRVEAGLDAHLPAIA-----QAPQRLHAAMRHATLGGGKRMRPLLVYASGAL 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F  +         A+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L 
Sbjct: 59  FGTDPARLDAPALAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQ 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQK 182
           + AFE+  +        +R Q + +L    G  GM GGQ LDI    I      +  +  
Sbjct: 119 SLAFEL-LAKADAADATLRVQWLQTLAEATGAAGMCGGQALDIDATGIVQPLADLQRMHA 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTGAL+  +   GA+   A       L  F   LG+ FQ+ DD+LD E 
Sbjct: 178 LKTGALIRASVRLGALGGGADHAALNHLDAFASALGLAFQIRDDILDVEA 227


>gi|99078713|ref|YP_611971.1| farnesyltranstransferase [Ruegeria sp. TM1040]
 gi|99035851|gb|ABF62709.1| Farnesyltranstransferase [Ruegeria sp. TM1040]
          Length = 336

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           L+ + L     M +QH  R+     + +  GGK++R  L    A +        L++ A 
Sbjct: 25  LEAVNLLIRERMASQHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGEHHLKLAAT 84

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +  
Sbjct: 85  VEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVDTGS-- 140

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              +R   +L+       +G +  QM    D    E     + + KT AL   A E G +
Sbjct: 141 ---LRVLDILANASATIAEGEVL-QMTAATDLGTTEEIYLQVVRGKTAALFSAATEVGGV 196

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +A AS+ + + L  +G+ LGI FQ+ADDLLD + D  K
Sbjct: 197 IAGASEAQVKALFDYGDALGIAFQIADDLLDYQGDTAK 234


>gi|110677933|ref|YP_680940.1| geranyltranstransferase [Roseobacter denitrificans OCh 114]
 gi|109454049|gb|ABG30254.1| geranyltranstransferase [Roseobacter denitrificans OCh 114]
          Length = 289

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 84/227 (37%), Positives = 131/227 (57%), Gaps = 7/227 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +R+D     +       +       ++ A+ +A  GGK++R FLV E A L ++    A+
Sbjct: 4   QRLDAAAAAVQAHFDKVLAAFEPLPIVEAMAHATSGGKRLRGFLVLETARLHDIAAGEAI 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               AIE +H YSL+HDDLP MDN  +RRG+PTVH ++D+ TA++AG+ L T AFE+++ 
Sbjct: 64  WSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTH 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALM 189
           P       +R+ L LSL    G QGM+ GQ LDI  E     +   ++  +Q+ KTGAL+
Sbjct: 124 PGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALI 183

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            ++ ++GA +A A       L+ + + LG+ FQ+ADD+LD   D  +
Sbjct: 184 GWSAQAGARLAQAD---TAALKRYAQALGLAFQIADDILDVTGDSAQ 227


>gi|304382638|ref|ZP_07365132.1| geranyltranstransferase [Prevotella marshii DSM 16973]
 gi|304336263|gb|EFM02505.1| geranyltranstransferase [Prevotella marshii DSM 16973]
          Length = 324

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 12/221 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D ILD            +    L   I+Y L +GGK+IR  L+    +L+  +  + L  
Sbjct: 5   DAILDMFNRYLEGQNYDRSPKSLYEPIKYVLSMGGKRIRPTLMLLAYNLYKDDPESILST 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIE  H Y+L+HDDL  MD+  +RRG+ TVH ++   TAI++G+ +L  A+E ++  +
Sbjct: 65  ACAIETYHNYTLLHDDL--MDHADVRRGRATVHKRWGANTAILSGDSMLVLAYERLARCR 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192
                  + + +L L     L  +  GQ  D+  E  D   E +   + ++KT  L+  A
Sbjct: 123 AD-----KLKDILDLFTETAL-EIGEGQEFDMSFEQRDDVKEEEYIEMIRLKTSVLLACA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GAI+A A   + E L  FGE +G+ FQL DD LD   D
Sbjct: 177 MKMGAILADAPPADAENLYKFGEQIGLAFQLQDDFLDVYGD 217


>gi|115376388|ref|ZP_01463625.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
 gi|310822665|ref|YP_003955023.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366595|gb|EAU65593.1| polyprenyl synthetase superfamily [Stigmatella aurantiaca DW4/3-1]
 gi|309395737|gb|ADO73196.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 297

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 88/243 (36%), Positives = 124/243 (51%), Gaps = 15/243 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L S L      ++++L     +  S        RL  A+RY+LL GGK++R  L   
Sbjct: 3   TFHLESFLATRQAHVESLLKSRADRLES---LGTPPRLAEAMRYSLLAGGKRLRPVLCLT 59

Query: 61  CASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            A   +     A        A+E IH YSL+HDDLPSMDN  +RRG+PT H  Y E  A+
Sbjct: 60  FADTTSRQSTAAAPVEDAACAVEYIHTYSLVHDDLPSMDNDDLRRGRPTNHKVYGEGMAL 119

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQ 176
           +AG+ LLT AF ++ S      + +R  L   L    G  GM+GGQ+LD+ +D       
Sbjct: 120 LAGDALLTEAFALVGSG----PEPVRGLLCGELARAAGAAGMVGGQVLDVAEDRPAHLDY 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  + +MKTGAL+  AC  G + A        R   +G+ +G+ FQ+ADD+LD     ED
Sbjct: 176 LVRLHRMKTGALLRAACRMGVLGAGGDAETLARATTYGDAIGLAFQIADDILDVTATAED 235

Query: 234 LPK 236
           L K
Sbjct: 236 LGK 238


>gi|309800468|ref|ZP_07694624.1| geranyltranstransferase [Streptococcus infantis SK1302]
 gi|308115909|gb|EFO53429.1| geranyltranstransferase [Streptococcus infantis SK1302]
          Length = 291

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  +I Y++  GGK+IR +L+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESILYSVHAGGKRIRPYLLLEVLDSLQVP 57

Query: 69  -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 +V AA+E IH  SLIHDDLP+MDN   RRG+ T H  Y E  AI+AG+ L    
Sbjct: 58  ITQEHAQVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKVYGEALAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           + +I+     L    +  L+ +L+   G  GM+ GQ+LD++ E   ++  ++  I   KT
Sbjct: 118 YALIAQA--DLPSQTKVDLIANLSLASGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ F  ++  I+A   +N +++L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLSFPFQAAGIIAGLDENHQKQLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|291544838|emb|CBL17947.1| farnesyl-diphosphate synthase [Ruminococcus sp. 18P13]
          Length = 297

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 5/231 (2%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
            + L++    I+ I  +L     +  +T    ++L A+RY+L  GGK+IR  LV      
Sbjct: 3   ETNLRQMESDIEWIERELQHCCRTKPETNPQAKVLEAMRYSLEAGGKRIRPLLVLAFCRA 62

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +   AL+   AIE IH YSLIHDDLP+MD+   RRG+ + H  +DE TAI+AG+ L 
Sbjct: 63  CGGDVQKALKPALAIEMIHTYSLIHDDLPAMDDDDYRRGRLSCHKAFDEATAILAGDALN 122

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181
              FE++S+  T L    R  L+  L +  G +GM+GGQ++DI +E    +D+  +  + 
Sbjct: 123 VLPFELLST-DTTLPAETRVSLIAELANAAGAEGMIGGQVIDIANETRTDVDQNNLVNMY 181

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KTGAL+  AC  G ++A A+         + + LG+ FQ+ DD+LD   
Sbjct: 182 AHKTGALIRVACTMGCMVAGANDKMLTAATEYAQRLGLAFQIVDDILDVTG 232


>gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
 gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
          Length = 300

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 12/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S L E +  I+  L   L Q          + L  +++Y+L+ GGK++R  LV   
Sbjct: 5   HTFESYLVEKTAYIEQRLLPALEQQ------GVPENLYESMKYSLMAGGKRLRPMLVLAV 58

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               +      +    A+E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+
Sbjct: 59  LEALDKPIERGVAFAVALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGD 118

Query: 122 GLLTYAFEIISSP---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
            LLT AF  I+     +T +       L+  L    G  GM+GGQM DI+ E   ++  Q
Sbjct: 119 ALLTRAFAYIAEAYMDRTDVSAATTVNLIAELGKRAGATGMVGGQMADIEGESKRLNLDQ 178

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  I + KTG L+  A   G  +A AS+ + E L  +G  +G+ FQ+ DD+L+ E D
Sbjct: 179 LEFIHRHKTGDLLIAALRGGGYLAEASEGQMEALTRYGVCIGLAFQIQDDILNVEGD 235


>gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor)
           [Blastopirellula marina DSM 3645]
 gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor)
           [Blastopirellula marina DSM 3645]
          Length = 298

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 88/243 (36%), Positives = 126/243 (51%), Gaps = 9/243 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M     + L E S  +   +D  L    S       DRL  AIRY+LL  GK++R  L  
Sbjct: 1   MTSASLATLHEYSDTLRDEVDQAL-NVYSSFGEGCPDRLQEAIRYSLLAPGKRLRPLLTL 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   A+    A+E IH YSLIHDDLP+MD+  +RRG+PT H  +DE TAI+A
Sbjct: 60  MAAETCGSDRTQAMPSACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHKAFDEATAILA 119

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177
           G+ LL  A EI++         + ++    L    G   ++GGQ  D+ ++F   D   +
Sbjct: 120 GDALLARALEIVADGYQD--PLVAARSCRELAKAAGATALVGGQADDLNEQFGSGDVEML 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
             I + KTGA++C +   GAI A A   +  +L  +GE +G+ FQ+ DDLLD   D   L
Sbjct: 178 KAIHRRKTGAMICVSLRLGAIAAGADDQQVAQLNLYGEQIGLAFQIVDDLLDYAGDEAAL 237

Query: 235 PKK 237
            K+
Sbjct: 238 GKR 240


>gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO]
 gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
 gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
 gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
 gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
 gi|258615761|ref|ZP_05713531.1| geranyltranstransferase [Enterococcus faecium DO]
 gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68]
 gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6]
 gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
 gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039]
 gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162]
 gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071]
 gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636]
 gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679]
 gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317]
 gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
 gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C]
 gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082]
 gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A]
 gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B]
 gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
 gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO]
 gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
 gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
 gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
 gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
 gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68]
 gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6]
 gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
 gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071]
 gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636]
 gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679]
 gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317]
 gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039]
 gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162]
 gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
 gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B]
 gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A]
 gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C]
 gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
 gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082]
          Length = 296

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 83/218 (38%), Positives = 122/218 (55%), Gaps = 7/218 (3%)

Query: 20  LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76
           L  +  +  S +     DR L  A+ Y++  GGK+IR  L+    + F+        +V 
Sbjct: 11  LPAVEKEILSFLDEHTTDRGLYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS    
Sbjct: 71  AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L ++ +  L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  
Sbjct: 129 HLGNSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALL 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +G I+A   +     L+   E+LG+ FQ+ DDLLD   
Sbjct: 189 AGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226


>gi|323144187|ref|ZP_08078822.1| geranyltranstransferase [Succinatimonas hippei YIT 12066]
 gi|322416028|gb|EFY06727.1| geranyltranstransferase [Succinatimonas hippei YIT 12066]
          Length = 294

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/231 (34%), Positives = 114/231 (49%), Gaps = 4/231 (1%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L E +  +   ++  +              L  A+ Y L LGGK+ R  LV        
Sbjct: 2   ELNEFALWVKNRVNSFMQARLDAFDADAP-ALKEAMSYGLILGGKRSRPLLVYATGKALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +  +     AA+ECIH YSLIHDD+P MDN  +RRG PTVH ++ + TA++AG+ L T 
Sbjct: 61  ASDASLDYAAAAVECIHAYSLIHDDMPEMDNDELRRGHPTVHKKFGQATALLAGDALQTL 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184
            FE  S   + L   +R +L   L    G  GM GGQ   LD + + I   ++ ++   K
Sbjct: 121 GFEFASDKNSGLSGELRGELCAVLAKGAGFSGMCGGQAMDLDAEGKHIPLERLRVLHSKK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           TGAL+  A   GA+ A A +  K  L  +    G+ FQ+ DD+LD   D  
Sbjct: 181 TGALIRVAVAMGAVCADADEKTKAVLDEYAALTGLAFQVWDDVLDVIGDTA 231


>gi|154498045|ref|ZP_02036423.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
           29799]
 gi|150273035|gb|EDN00192.1| hypothetical protein BACCAP_02026 [Bacteroides capillosus ATCC
           29799]
          Length = 312

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 85/221 (38%), Positives = 126/221 (57%), Gaps = 5/221 (2%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
            +++D L    +   ++ +  L  A+ Y+LL GGK+IR  L  E   +   +  TAL   
Sbjct: 31  ALVEDYLQHCFAGRDSRAD--LYDAMLYSLLAGGKRIRPVLALETCRMCGGDVTTALPFA 88

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E +H YSLIHDDLP MD+  +RRG+PT H  Y E TA++AG+ LLT AFE I+   T
Sbjct: 89  CAVEMVHTYSLIHDDLPCMDDDDLRRGQPTNHKVYGEATAVLAGDALLTAAFETIAEHGT 148

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L           L    G +GM+GGQ LD+  E   +  +++  +Q++KTGAL+  A E
Sbjct: 149 SLSPERALAASACLGRAAGARGMVGGQALDMAGEGHSLSLSELEELQRLKTGALISAATE 208

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            G I+A   + E+  +R + + LG+ FQ+ DD+LD E D  
Sbjct: 209 IGCIVAGGGEKERAAVRRYAQLLGLAFQIRDDMLDVEGDEA 249


>gi|332882802|ref|ZP_08450413.1| heptaprenyl diphosphate synthase component 2 family protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679304|gb|EGJ52290.1| heptaprenyl diphosphate synthase component 2 family protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 322

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 14/228 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I+   ++ L    + +  +    L   I Y L LGGK++R  L    A LF  ++  AL 
Sbjct: 4   INHYREEFLAHLKTSIAVKEPRNLYEPIDYILQLGGKRLRPVLTLIAADLFGGDYRKALP 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             AA+E  H +SL+HDD+  MDN  +RRGK TVH +++   AI++G+ +L  A+ ++ S 
Sbjct: 64  AAAAVEVFHNFSLVHDDI--MDNASLRRGKATVHQKWNSNIAILSGDAMLISAYCLLDSY 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCF 191
                        L+   +     +  GQ  D+  E    +   Q   + + KT  L+  
Sbjct: 122 PPDTFAA------LAKLFSKTALEVCEGQQWDMDFETQAQVSIPQYLQMIRYKTAVLVGA 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
           A + GAI+A AS   +  +  FG  +G+ FQL DD LD   D    KK
Sbjct: 176 ALQMGAIIAGASIENQRLIYDFGVTIGLAFQLQDDYLDTFGDEAFGKK 223


>gi|322372793|ref|ZP_08047329.1| geranyltranstransferase [Streptococcus sp. C150]
 gi|321277835|gb|EFX54904.1| geranyltranstransferase [Streptococcus sp. C150]
          Length = 290

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 10/225 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTA 72
           +ID  + D   +    +  +    L+SAI Y++  GGK+IR  +  +    F +    + 
Sbjct: 6   KIDAAIRDYYQKKNLPVSHE----LISAILYSVDGGGKRIRPLIFLDLLEGFGLELTDSH 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             V A++E IH  SLIHDDLP+MDN   RRG  T H ++DE TAI+AG+ L    F++++
Sbjct: 62  FDVAASLEMIHTGSLIHDDLPAMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDPFDLLA 121

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
              T+L   IR +L+ +L+H  G  GM+GGQMLD++ E   +D +Q+  I + KTG L+ 
Sbjct: 122 Q--TELSAEIRVELIQALSHASGTFGMVGGQMLDMKGEGQELDLSQLAQIHEHKTGKLLT 179

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           F   +  I+A       + L+  G+ +G+ FQ+ DD+LD   D  
Sbjct: 180 FPFVAAGIVAQQGLEVLDNLQEAGQLIGLAFQVRDDILDVTADFE 224


>gi|326335315|ref|ZP_08201510.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692586|gb|EGD34530.1| geranyltranstransferase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 323

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 14/223 (6%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++ L     H   +    L   I Y L +GGK++R  L    A++F  ++  AL    A+
Sbjct: 9   NEFLAFMKEHFVEREPKSLYDPIHYILNVGGKRLRPTLTMLSANIFGEDYHKALYAALAV 68

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H +SL+HDD+  MD   +RRG+PTVH +++  T I++G+ +L  A++     +  + 
Sbjct: 69  EIFHNFSLVHDDI--MDEASLRRGQPTVHTKWNLNTGILSGDTMLILAYQYFEQYEPNIF 126

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESG 196
                   L+   +     +  GQ  D+  E    +   Q   +   KT  L+  A + G
Sbjct: 127 QE------LAKIFSKTAIEVCEGQQYDVDFEKEVQVSTDQYLKMIAYKTAVLIGAALKMG 180

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
           AI+A  ++  K+++  FG  LGI +QL DD LD   D    KK
Sbjct: 181 AIIAQTTEENKQQIYDFGLALGIAYQLQDDYLDTFGDVSFGKK 223


>gi|198283751|ref|YP_002220072.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665395|ref|YP_002426382.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248272|gb|ACH83865.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517608|gb|ACK78194.1| geranyltranstransferase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 306

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 82/238 (34%), Positives = 118/238 (49%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           N         + +RI+ +L+ LL             RL  A+RY+ L GGK++R  LV  
Sbjct: 9   NETFAQFRSRSVRRIEDVLETLLPPAHL-----LPARLHDAMRYSTLGGGKRVRPLLVYA 63

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             +   V      R  AA+E IH YSL+HDDLP+MDN  +RRG PT H  YDE TAI+ G
Sbjct: 64  AGACLGVPLELLDRPAAALEMIHAYSLVHDDLPAMDNDDLRRGLPTCHRAYDEATAILVG 123

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
           +GL   AF +++ P   +    + Q++ SL    G +GM+GGQ +D       +    + 
Sbjct: 124 DGLQAQAFLVLAEPGWGMAAERQVQMLASLAQAAGSRGMVGGQAIDLAAVGHELALPALE 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEEDL 234
            +   KTG LM  A +     A     E     L  + + +G+ FQ+ DD+LD   DL
Sbjct: 184 QMHLHKTGMLMRCAIQLALCAAGIDAQEARGAALLRYADRVGLAFQVQDDILDEIGDL 241


>gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
 gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
          Length = 295

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 86/210 (40%), Positives = 120/210 (57%), Gaps = 10/210 (4%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
               L  A+RY+LL GGK+IR FLV     +  V+      +  AIECIHCYSLIHDDLP
Sbjct: 29  SPAPLADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLP 88

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN  +RR  PT HI +DE TAI+AG+ L +YAFE+++  K+ + D  +      L + 
Sbjct: 89  AMDNDTLRRNNPTCHIAFDEATAILAGDALQSYAFELLA--KSPIADQQKILQFQLLANA 146

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKER 209
            G +GM  GQ LD+  E   I   ++  I K KTGAL+  A   G   +    ++  K++
Sbjct: 147 SGAEGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQK 206

Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
           L  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 207 LISFSAAIGLAFQVQDDILDITSSNEELGK 236


>gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
 gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
          Length = 289

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 9/228 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-L 73
           + + L  L    A   Q Q  +RL  ++ Y+L  GGK+IR  L+      F +    A  
Sbjct: 2   VASKLQRLEETMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +V A +E IH  SLIHDDLP+MDN   RRG+ T H  YDE TAI+AG+ L    F  ++ 
Sbjct: 62  QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
               L       L+  L+   G  GM+ GQ+LD+  E   +   Q+  I   KTG L+ F
Sbjct: 122 --VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTF 179

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
              +  ++A  S      LR  G+ +G+ FQ+ DD+LD     E++ K
Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGK 227


>gi|296109469|ref|YP_003616418.1| Polyprenyl synthetase [Methanocaldococcus infernus ME]
 gi|295434283|gb|ADG13454.1| Polyprenyl synthetase [Methanocaldococcus infernus ME]
          Length = 317

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 78/230 (33%), Positives = 117/230 (50%), Gaps = 19/230 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E  + ID  L   L +         ++ L  A ++    GGK+IR +L     +L   N
Sbjct: 6   KEILEEIDKELKKYLDK---------DNNLYKAAKHLTFAGGKRIRPYLSILTYNLKKDN 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L    ++E IH Y+LIHDD+  MDN  +RRGKPTVHI Y E  AI+AG+ L   AF
Sbjct: 57  INEILPAAVSVELIHNYTLIHDDI--MDNDELRRGKPTVHIAYGEEMAILAGDLLYAKAF 114

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTG 186
           E I + K + K   +   +LS         +  GQ +D++ E       +   + K KTG
Sbjct: 115 EAIGNIKDE-KKAYKVLKVLSKA----CVDVCEGQAMDMEFESYWPTLEEYLEMIKKKTG 169

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AL+  + E G IMA  ++ E + ++ + E +G+ FQ+ DD+LD   D  K
Sbjct: 170 ALLEASAEIGGIMAEFNEEEMKAIKSYAEKIGLTFQIQDDILDIIGDEKK 219


>gi|297588519|ref|ZP_06947162.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516]
 gi|297573892|gb|EFH92613.1| possible geranyltranstransferase [Finegoldia magna ATCC 53516]
          Length = 271

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 15/228 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           QE    I+T L +L            +D++  A+RY ++    K++R  L      +FN 
Sbjct: 6   QEIINLINTSLKEL---------KFSDDKIGEAMRYTIVDDSAKRLRPLLFLLTYQMFNE 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   +L    AIE IH YSL+HDDL  MDN   RRGK TVH +Y E  A++ G+ LL Y+
Sbjct: 57  SITESLNYALAIELIHNYSLVHDDLECMDNDEYRRGKLTVHKKYGEDIAVLVGDALLNYS 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           FE++S     +K+   ++    +    G  GM+ GQ+LDI  E I E  +  I   KT  
Sbjct: 117 FEVLSES---IKNEFDAKCANYIVKKSGCFGMIKGQLLDIDSE-ISEKNIIEIYDKKTCN 172

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+  +  S  I++    N   +L  +  NLG+ FQ+ DD++D E DL 
Sbjct: 173 LLKASTVSAGILSRVGDNTLLKLEDYAFNLGMAFQIIDDIMDYENDLK 220


>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
 gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
          Length = 296

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 135/240 (56%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M       L E    I+  L      +    +    D L  ++ Y+L  GGK++R  +V 
Sbjct: 1   MANKFEQFLAERKNVIEQQL------SVYTERLNMPDSLKKSMLYSLEAGGKRLRPVVVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  + E TA++A
Sbjct: 55  AILHAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLA 114

Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
           G+GLLT +F++I+S  ++ +  + R +L+  L    G +GM+GGQ+ D++ E   +   +
Sbjct: 115 GDGLLTESFKLITSHVSEDVSADKRLRLVNELISAAGTEGMVGGQIADMEAESKSVSLEE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I + KT  L+ F+  +GAI+A A +NE E LR F  ++GI FQ+ DD+LD E +  K
Sbjct: 175 LESIHERKTAKLLAFSVMAGAILADAPENEIETLRAFSSHIGIGFQIRDDILDLEGNEEK 234


>gi|254995136|ref|ZP_05277326.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Mississippi]
 gi|255003306|ref|ZP_05278270.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Puerto Rico]
 gi|255004432|ref|ZP_05279233.1| geranyltranstransferase (farnesyl-diphosphate synthase)(ispA)
           [Anaplasma marginale str. Virginia]
          Length = 286

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 88/229 (38%), Positives = 126/229 (55%), Gaps = 4/229 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S +Q+  +   +++   L Q         +  L  A+ Y +   GK IRSFL +  A +F
Sbjct: 6   SDIQQKVEDFASLVQKELAQVVHEKAECPSAALHEALGYVISNPGKCIRSFLASTSAQVF 65

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V+    LR+ AAIE +H YSL+HDDLPSMDN  IRRGK + HI++ E  A++ GN LLT
Sbjct: 66  GVSTERTLRLSAAIEVVHAYSLVHDDLPSMDNSPIRRGKESCHIKFGEAVAVLTGNALLT 125

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMK 184
             FE++S+        +R +++  L+   G  GM+ GQMLD++         V  I ++K
Sbjct: 126 LTFELLSTMNEGCA--VRCEIIELLSKACGRCGMIAGQMLDMEAHSSTSFEGVRRIHELK 183

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   ACE+GA++  AS  E+  L  +G  LG  FQ  DDL D  ED
Sbjct: 184 TARLFSAACEAGAVLGGASAEERAALAKYGAALGCAFQAKDDLSDAWED 232


>gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
 gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
 gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84]
 gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7]
 gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407]
 gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
 gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
 gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84]
 gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407]
 gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7]
 gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1]
 gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
          Length = 289

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 9/228 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-L 73
           + + L  L    A   Q Q  +RL  ++ Y+L  GGK+IR  L+      F +    A  
Sbjct: 2   VASKLQRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHY 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +V A +E IH  SLIHDDLP+MDN   RRG+ T H  YDE TAI+AG+ L    F  ++ 
Sbjct: 62  QVAACVELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQ 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
               L       L+  L+   G  GM+ GQ+LD+  E   +   Q+  I   KTG L+ F
Sbjct: 122 --VDLPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTF 179

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
              +  ++A  S      LR  G+ +G+ FQ+ DD+LD     E++ K
Sbjct: 180 PFVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGK 227


>gi|121634131|ref|YP_974376.1| geranyltranstransferase [Neisseria meningitidis FAM18]
 gi|120865837|emb|CAM09569.1| geranyltranstransferase [Neisseria meningitidis FAM18]
 gi|325143100|gb|EGC65447.1| geranyltranstransferase [Neisseria meningitidis 961-5945]
 gi|325143170|gb|EGC65516.1| geranyltranstransferase [Neisseria meningitidis 961-5945]
 gi|325197545|gb|ADY93001.1| geranyltranstransferase [Neisseria meningitidis G2136]
          Length = 298

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 124/238 (52%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E  A++ G
Sbjct: 59  ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           + L T AF+++S P T+L    +  ++  L    G +GM GGQ +D+ +      +  + 
Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAGGQAIDLANVGKQMVQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA      S  E   L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235


>gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
 gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
          Length = 295

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/236 (33%), Positives = 132/236 (55%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +       R+D  L+ L     + +Q     RL  A+RY+++ GGK++R  LV     
Sbjct: 2   IKAYQASCQARVDAALEPLFQPPRAELQ-----RLYEAMRYSVMNGGKRVRPLLVYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             + N   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE +AI+AG+GL
Sbjct: 57  ALDGNLDRADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
            + AFE+++  +   +D  +R Q++ +L+   G  GM+GGQ +D     + +D+  +  +
Sbjct: 117 QSLAFEVLADRRRNPQDAEVRLQMIDALSSAAGPAGMVGGQAIDLGSVGQQLDQAALETM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  +   GA+ +  A +   + L  +   +G+ FQ+ DD+LD E D  
Sbjct: 177 HRHKTGALIEASVLLGALASGNADELSLKALLQYARAVGLAFQVQDDILDVESDTA 232


>gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
          Length = 295

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 7/226 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTA 72
           + ++    + +LQT   +       L  A+RY+ L GGK++R  LV   + L N      
Sbjct: 10  QAVEQA--ERILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELGNQVQAAC 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+ECIH YSL+HDD+P+MDN  +RRGKPT H+Q+ E TA++ G+ L T AF+I+S
Sbjct: 68  EAAMAAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLVGDALQTLAFDILS 127

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMC 190
           + +T+L    + +++  L    G  GM GGQ +D+ +    + +T++  +  +KTGAL+ 
Sbjct: 128 T-ETELSTVRQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLKTGALIR 186

Query: 191 FACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            A   G +     +  +   L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 187 AAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTA 232


>gi|254882776|ref|ZP_05255486.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319643916|ref|ZP_07998491.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A]
 gi|254835569|gb|EET15878.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317384440|gb|EFV65407.1| isoprenoid biosynthesis like protein [Bacteroides sp. 3_1_40A]
          Length = 325

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 113/223 (50%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D +L+ +    A+    +    L + I Y L LGGK+IR  L+     L+  N    L  
Sbjct: 6   DQLLEKVNTYLATMPYVREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILPQ 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE  H Y+L+HDDL  MD   +RR KPTVH  +DE TAI++G+ +L  A+ ++++  
Sbjct: 66  AAGIETYHNYTLLHDDL--MDCADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLMNNC- 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFA 192
                    + ++ +     L  +  GQ  D++ E  ++    +   + ++KT  L+  A
Sbjct: 123 ----PERYLKQVMDIFSQTAL-EICEGQQWDMEFETRNDVTVPEYMEMIRLKTSVLLSAA 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + GA++   S+++  +L  FG  +G+ FQL DD LD   D  
Sbjct: 178 LKIGAVLGGGSEDDARKLYDFGIKMGLAFQLQDDYLDVYGDSK 220


>gi|260890388|ref|ZP_05901651.1| geranyltranstransferase [Leptotrichia hofstadii F0254]
 gi|260860008|gb|EEX74508.1| geranyltranstransferase [Leptotrichia hofstadii F0254]
          Length = 265

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 122/209 (58%), Gaps = 11/209 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLP 93
           +  A+ YA++ GGK+IR  L+     LF  N    +     + AA+E IHCYSL+HDDLP
Sbjct: 1   MAEAMEYAVMNGGKRIRPVLMYMICDLFEKNNYKSYDKIKEIAAALEFIHCYSLVHDDLP 60

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRGK TVH +Y+E   ++ G+ LLT AF I+++ K+ L D  + +L+  L+  
Sbjct: 61  AMDNDDYRRGKLTVHKKYNEAIGVLVGDVLLTEAFGIVANSKS-LGDKNKIELISKLSEY 119

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQ +D++ E   ++   +  I   KTG L+  A E   I  +    ++E++ 
Sbjct: 120 AGFFGMVGGQFVDMESENKKVEIDTLKYIHAHKTGKLLTAAIELPMIALNIESEKREKMV 179

Query: 212 CFGENLGIIFQLADDLLDCEE---DLPKK 237
            + + LGI FQ+ DD+LD E    ++ KK
Sbjct: 180 EYSKLLGIAFQIKDDILDIEGNFEEIGKK 208


>gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2]
 gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2]
          Length = 294

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 84/227 (37%), Positives = 123/227 (54%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC-ASLFNV 67
           ++    I+ ++   L +  S      +  L  ++ Y++  GGK+IR  L+T   AS    
Sbjct: 6   EKYLSEIEAVIVRFLEEHTS------DQTLKDSMLYSIHAGGKRIRPLLLTATVASFHKS 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             L   +  AA+E IH YSLIHDDLP+MD+  +RRGKPT H  Y E  AI+AG+GLLT A
Sbjct: 60  MTLGVYQTAAALEMIHTYSLIHDDLPAMDDDALRRGKPTNHKVYGEALAILAGDGLLTAA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F+++S    +    I     LS T   G  GM+ GQ  DIQ E   +   ++  I + KT
Sbjct: 120 FQLLSLADLEPDKKILLLQQLSHT--AGTAGMVAGQAADIQGENQQLTLDELISIHERKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ FA  +G I+A  ++   + L  F  ++G+ FQ+ DDLLD   
Sbjct: 178 GELIRFAVIAGGILADQTEEVIQLLDQFARHMGLAFQIRDDLLDVTS 224


>gi|312891447|ref|ZP_07750964.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603]
 gi|311296141|gb|EFQ73293.1| Geranyltranstransferase [Mucilaginibacter paludis DSM 18603]
          Length = 324

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 12/227 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           ++I  + + +    ++         L   I Y + LGGK++R  L+     +F  +   A
Sbjct: 2   QQIQQLQNSINQYISNKKYGTTPVELYEPIYYIMALGGKRLRPCLLLMACDMFGGDVQQA 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    AIE  H ++L+HDD+  MD   +RRGKPTVH +++   AI++G+ ++  A ++I 
Sbjct: 62  LAPALAIEVFHNFTLMHDDI--MDKAPLRRGKPTVHEKWNANVAILSGDVMMVEANKLIM 119

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALM 189
                  D+   + +L + ++  + G+  GQ +D+  E    +   +   + ++KT  L+
Sbjct: 120 Q-----VDDRILRPVLDVFNDTAV-GVCEGQQIDMNFETLTHVTIDEYINMIRLKTAVLV 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A + GA++  A   E   L  FGE LGI FQL DD+LD   D  K
Sbjct: 174 AGALKMGALVGGADDAEASLLYSFGEQLGIAFQLQDDILDVYGDPKK 220


>gi|258511741|ref|YP_003185175.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 291

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 81/231 (35%), Positives = 119/231 (51%), Gaps = 9/231 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           + + L+   + ++  L  L   T  H       RL  A+ Y+L+  GK++R  LV   A 
Sbjct: 1   MQTYLEACKEAVNAFLARLFEPTGLHA------RLKEAMNYSLMADGKRLRPALVIATAE 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F V     L   AA+E IHCYSLIHDDLP MD+  +RRG+PT H+ + E  A++AG+ L
Sbjct: 55  TFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT AF +++ P   +    +  ++ +L    G+ GM+GGQ +DI+          V  I 
Sbjct: 115 LTEAFHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVEFIH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT  L+    E G   A      +  L C+GE LG+ FQ+ DD+LD   
Sbjct: 175 LHKTARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTA 225


>gi|329123445|ref|ZP_08252009.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
 gi|327471027|gb|EGF16482.1| geranyltranstransferase [Haemophilus aegyptius ATCC 11116]
          Length = 296

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 131/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A+ YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMEYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G QGM  GQ LD+  E   I   ++ +
Sbjct: 117 ALQSFAFEILTK-TPNISSEQKLALIKILAQGAGAQGMCLGQSLDLISEHKQISLNELEL 175

Query: 180 IQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +   A +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFADKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|322412220|gb|EFY03128.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 290

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLIILEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTEQTITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 307

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
                ++    +++  L   L    +        RL  A+RYA L GGK++R  LV    
Sbjct: 15  SFADWMRGVQAQLEAALARNLPPGEAI-----PGRLHQAMRYASLDGGKRVRPLLVFAAG 69

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L +          +A+E IH YSL+HDDLP MD+  +RRG+PT H++YDE TA++ G+ 
Sbjct: 70  DLTDAARERLELAASAVELIHSYSLVHDDLPCMDDDVLRRGRPTCHVEYDEATALLVGDS 129

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L + AFE+++          + +++  L    G  GM GGQ +D++   + +++ ++ ++
Sbjct: 130 LQSLAFELLAREDFG-DGARQLEMVRLLARASGSCGMAGGQSIDLESVGKTLNQPELELM 188

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +KTGAL+  A   GA+     S  E+E L  F +  G++FQ+ DD+LDC  
Sbjct: 189 HALKTGALIRAAVILGALCGTPLSTTEREALDRFAKRAGLLFQVVDDILDCTA 241


>gi|260588126|ref|ZP_05854039.1| geranyltranstransferase [Blautia hansenii DSM 20583]
 gi|331082306|ref|ZP_08331432.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541653|gb|EEX22222.1| geranyltranstransferase [Blautia hansenii DSM 20583]
 gi|330400792|gb|EGG80393.1| hypothetical protein HMPREF0992_00356 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 296

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 19/246 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN    ++LQE +   + +++  L +         + R+  A+ Y++  GGK++R   + 
Sbjct: 1   MN--FKTELQERTDFAEAVIEKYLPEEHG-----FSGRMAEAVNYSMRAGGKRLRPVFMR 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +            AA+E +H +SLIHDDLP++DN   RRGK T HI + E  AI+A
Sbjct: 54  EAYQILGGEGEIIEPFMAALEMVHTHSLIHDDLPALDNDEFRRGKQTTHIVFGEAAAILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSL----THNIGLQGMLGGQMLDIQDEFIDET 175
           G+ LL YA+E   S     KD    Q +           G++GMLGGQ +D++++     
Sbjct: 114 GDALLNYAYETAFSAFDMAKDEAELQRVAKALKVLAQKTGIKGMLGGQGVDVENDGKPLE 173

Query: 176 Q--VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230
           +  +  I + KT AL+  A   G I+A A+    E+L   G  +GI FQ+ DD+LD    
Sbjct: 174 KQLLDYIYENKTSALIEAALMVGGILAGATD--IEKLEQIGSKIGIAFQIQDDILDVISS 231

Query: 231 EEDLPK 236
            E+L K
Sbjct: 232 AEELGK 237


>gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
 gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
          Length = 293

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 11/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
                +   +R++  L+  L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWTRSVLERVEAALEHYLP-----AETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF  ++S    L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVSLTSD--VLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRAQLETMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+   A      R L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 RMKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230


>gi|16273345|ref|NP_439590.1| geranyltranstransferase [Haemophilus influenzae Rd KW20]
 gi|1170589|sp|P45204|ISPA_HAEIN RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|1574277|gb|AAC23087.1| geranyltranstransferase (ispA) [Haemophilus influenzae Rd KW20]
          Length = 295

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|229823205|ref|ZP_04449274.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271]
 gi|229787371|gb|EEP23485.1| hypothetical protein GCWU000282_00503 [Catonella morbi ATCC 51271]
          Length = 297

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 83/227 (36%), Positives = 127/227 (55%), Gaps = 11/227 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L    +  +  LD    QT  H+      RL+ A+RY+L  GGK++R  ++    ++ +
Sbjct: 5   ELDTLRQLFERSLDQ---QTRYHL---TPPRLIEAMRYSLKNGGKRLRPVMLLAVLAIQS 58

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            + +   L+   A+E IH YSLIHDDLP+MDN  +RRG+ T H ++ E  AI+AG+ LLT
Sbjct: 59  EDLVKCGLKTAIALEYIHTYSLIHDDLPAMDNDDLRRGQATNHKRFGEGLAILAGDALLT 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKM 183
            AF+ + S    L D  +  L+  L+   G  GM+ GQ+ DI+ E        +  I   
Sbjct: 119 DAFQFLVSDDL-LDDRTKLALIDQLSQASGSWGMVAGQVGDIEAEQTPVDYQGLKQIHDQ 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KTGAL  FA E+GAI+  A  +  + LR FG + G+ +Q+ +DL+D 
Sbjct: 178 KTGALFRFALEAGAIIGGADASTCQALRQFGRHFGLAYQIHNDLMDV 224


>gi|209517792|ref|ZP_03266627.1| Polyprenyl synthetase [Burkholderia sp. H160]
 gi|209501738|gb|EEA01759.1| Polyprenyl synthetase [Burkholderia sp. H160]
          Length = 293

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 11/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
                +   +R++T L+  L       +T     L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWTRSVLERVETALEHYLP-----AETTEPAGLHGAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF +++S    +    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVVLTSDVLGVP--QQASLVRELALASGSIGMCGGQAIDLASVGHTLTRPQLETMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+   A   +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 RMKTGALLRAAVRMGALAGEAPDAKALASLDAYAAAVGLAFQVVDDILDVTTDSA 230


>gi|152968946|ref|YP_001334055.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238893358|ref|YP_002918092.1| geranyltranstransferase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042444|ref|ZP_06015604.1| geranyltranstransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|150953795|gb|ABR75825.1| geranyltranstransferase (farnesyldiphosphate synthase) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238545674|dbj|BAH62025.1| geranyltranstransferase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259040219|gb|EEW41330.1| geranyltranstransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 299

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +LQ   ++ +  L   +       Q   N  L+ A+ Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLQACVEQANEALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V   T     AA+ECIH YSL+HDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  EMFGVCRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S  P   + D  R  ++  L    G+ GM GGQ LD+Q E   +D   +  
Sbjct: 117 LQTLAFSILSDAPMVDVPDRDRLAMVSELAQASGVAGMCGGQALDLQAEGQQVDLQALER 176

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + EN+G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRMGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|296159644|ref|ZP_06842467.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1]
 gi|295890088|gb|EFG69883.1| Polyprenyl synthetase [Burkholderia sp. Ch1-1]
          Length = 293

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 81/235 (34%), Positives = 122/235 (51%), Gaps = 11/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++   +R++T L+  L   A+   T     L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLERVETALEHYLPGEATEPAT-----LHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF  ++S    L    ++ L+  L    G  GM GGQ +D+      +  TQ+  + 
Sbjct: 118 QSQAFVALTS--EVLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+       +  R L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 RMKTGALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230


>gi|255531531|ref|YP_003091903.1| polyprenyl synthetase [Pedobacter heparinus DSM 2366]
 gi|255344515|gb|ACU03841.1| Polyprenyl synthetase [Pedobacter heparinus DSM 2366]
          Length = 322

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 22/235 (9%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
           P++LQE    I+  + ++             ++L + IRY + +GGK+IR  L    A L
Sbjct: 4   PAQLQEV---IENAIQNINY-------PAQPEKLYAPIRYIMSMGGKRIRPVLTLMAADL 53

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F  + L A+    AIE  H ++L+HDD+  MDN  +RRGK TVH ++    AI++G+ ++
Sbjct: 54  FEADILKAIPAALAIETFHNFTLVHDDI--MDNAPLRRGKQTVHEKWGINNAILSGDVMM 111

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQ 181
             A + +S   + +  +         T N   +G+  GQ LD++ E    +   +   + 
Sbjct: 112 VEANKQLSMLHSAILKDAL------ETFNATARGVCEGQQLDMEFEQQAIVSIPEYINMI 165

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++KT  L+  A + GA +A A  NE E+L  FG NLGI FQL DD+LD   D  K
Sbjct: 166 RLKTAVLLGGAMKLGAQVAGADHNEAEQLYQFGLNLGIAFQLQDDILDVYGDPEK 220


>gi|154686692|ref|YP_001421853.1| YqiD [Bacillus amyloliquefaciens FZB42]
 gi|154352543|gb|ABS74622.1| YqiD [Bacillus amyloliquefaciens FZB42]
          Length = 296

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L + L    + I+  L     + A        + L  ++ Y+L  GGK++R  +V 
Sbjct: 1   MTNKLDAFLASRKQLIEQQLSLYTERLA------MPETLKKSMLYSLEAGGKRLRPLVVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              + +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  AVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLA 114

Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
           G+GLLT +F++I+S  ++ +    R +L+  L    G +GM+GGQ  D++ E   I   +
Sbjct: 115 GDGLLTESFKLITSHVSEAVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKRITLEE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I + KT  L+ F+  +GAI+A A ++E E+LR F  ++GI FQ+ DD+LD E    K
Sbjct: 175 LESIHERKTAKLLGFSVTAGAILADAPEDEVEKLRLFSSHIGIGFQIRDDILDIEGHEEK 234


>gi|313148980|ref|ZP_07811173.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137747|gb|EFR55107.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 324

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 12/222 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    +    T+    L   ++Y L +GGK+IR  L+    +L+  +  +     
Sbjct: 6   QLLDKINSHISDIQFTRTPVGLYDPVKYVLSMGGKRIRPVLMLMAYNLYKEDVTSVYDPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H Y+L+HDDL  MD   +RRGK TVH  +++ TAI++G+ ++  A++ ++S  +
Sbjct: 66  TAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILSGDAMMVLAYQYMASCSS 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ +D+  E  D   E +   + ++KT  L+  + 
Sbjct: 124 EYLKEVMDLFSLT------ALEICEGQQMDMGFESRDDVKEEEYLEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + GAI+  AS+ + E L  FG  +G+ FQL DDLLD   D  
Sbjct: 178 KIGAILGGASREDAENLYDFGMQIGVAFQLQDDLLDVYGDSA 219


>gi|238791414|ref|ZP_04635052.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909]
 gi|238729030|gb|EEQ20546.1| Geranyltranstransferase [Yersinia intermedia ATCC 29909]
          Length = 306

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 13/244 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           +     +L  + +R++  L D +           +  L++A+RY A+LGGK++R +LV  
Sbjct: 7   SADFQQQLAAHQQRVNQALLDFIAPL-----PFGDSDLVAAMRYGAVLGGKRLRPYLVYA 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F ++        AAIECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG
Sbjct: 62  TGQMFGLSLTNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAG 121

Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           + L T AF I++      + +  R  ++  L    G+ GM GGQ LD++ E   I  T +
Sbjct: 122 DALQTLAFSILAEANMPDVANKDRLSMIAELAKASGVAGMCGGQALDLEAEARQISLTNL 181

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED--- 233
             I + KTGAL+  A   GA+ A A        L  + E +G+ FQ+ DD+LD   D   
Sbjct: 182 EQIHRYKTGALIRAAVRLGALAAGAPGRRALPLLDRYSEAIGLAFQVQDDILDVIGDTAT 241

Query: 234 LPKK 237
           + K+
Sbjct: 242 IGKR 245


>gi|330006916|ref|ZP_08305788.1| polyprenyl synthetase [Klebsiella sp. MS 92-3]
 gi|328535670|gb|EGF62119.1| polyprenyl synthetase [Klebsiella sp. MS 92-3]
          Length = 299

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +LQ   ++ +  L   +       Q   N  L+ A+ Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLQACVEQANEALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V   T     AA+ECIH YSL+HDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  EMFGVCRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S  P   + D  R  ++  L    G+ GM GGQ LD+Q E   +D   +  
Sbjct: 117 LQTLAFSILSDAPMVDVPDRDRLAMVSELAQASGVAGMCGGQALDLQAEGQQVDLQALER 176

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + EN+G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|240113852|ref|ZP_04728342.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
 gi|240126561|ref|ZP_04739447.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
 gi|254494609|ref|ZP_05107780.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
 gi|268599920|ref|ZP_06134087.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
 gi|268685141|ref|ZP_06152003.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
 gi|226513649|gb|EEH62994.1| geranyltranstransferase [Neisseria gonorrhoeae 1291]
 gi|268584051|gb|EEZ48727.1| geranyltranstransferase [Neisseria gonorrhoeae MS11]
 gi|268625425|gb|EEZ57825.1| geranyltranstransferase [Neisseria gonorrhoeae SK-92-679]
          Length = 298

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L         +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L         +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E TA++ G
Sbjct: 59  ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           + L T AF+++S P T+L    +  ++  L    G  GM GGQ +D+ +      +  + 
Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKTGGSAGMAGGQAIDLANVGKQMVQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA      S  E   L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 RMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235


>gi|332201672|gb|EGJ15742.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA47368]
          Length = 291

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|15615344|ref|NP_243647.1| geranyltranstransferase [Bacillus halodurans C-125]
 gi|10175402|dbj|BAB06500.1| geranyltranstransferase [Bacillus halodurans C-125]
          Length = 294

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 91/236 (38%), Positives = 129/236 (54%), Gaps = 10/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+  L   L E    I+  +   + +  S       D L +++ Y+L  GGK+IR  L+ 
Sbjct: 1   MSVQLLQFLDEIKDIIEERMPAHIERLNS------PDMLKNSMLYSLKAGGKRIRPALLL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                F  +    + +  AIE IH YSLIHDDLPSMD+  IRRGKPT H  + E  AI+A
Sbjct: 55  ATMKSFQKDISQGIDLACAIEMIHTYSLIHDDLPSMDDDDIRRGKPTNHKVFGEAHAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLTY+FEI++  K           +  L    G +GM+GGQ+ DI+ E   +    +
Sbjct: 115 GDALLTYSFEIVAKMKGVDPAKTLCL-IEELARAAGPEGMVGGQVADIEGENQKLTVEGL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             I   KTGAL+ FA  +GA +A AS+ + E +R F   LG++FQ+ DD+LD E D
Sbjct: 174 EYIHHHKTGALLSFAIVAGARLADASEQDIENIRRFSRELGLLFQIKDDILDVEGD 229


>gi|52425115|ref|YP_088252.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307167|gb|AAU37667.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 300

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 90/236 (38%), Positives = 131/236 (55%), Gaps = 11/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
             + LQ+  +RI+  L+    +  +         L  A++Y  LLGGK+IR FLV     
Sbjct: 8   FSNDLQQAQQRINRFLEAQFDEINTR-----PSPLADAMKYGLLLGGKRIRPFLVYATGR 62

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +        AAIE IH YSLIHDDLP+MDN  +RRG+PT HI +D  TAI+AG+ L
Sbjct: 63  MLGADTAQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDHATAILAGDAL 122

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
             +AFEI++   T L    + +L+  L+HN G+ GM  GQ LD+  E   I  +++  I 
Sbjct: 123 QAFAFEILTKS-TALSAEQKLRLIQVLSHNSGVFGMCLGQSLDLISEHKQISLSELEQIH 181

Query: 182 KMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + KTGAL+  A + G I +   A    + +L  +   +G+ FQ+ DD+LD E DL 
Sbjct: 182 RNKTGALLSAALKMGFICSSHFADNALEAKLDRYAAAIGLAFQVQDDILDIEGDLA 237


>gi|85705714|ref|ZP_01036811.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Roseovarius sp. 217]
 gi|85669704|gb|EAQ24568.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Roseovarius sp. 217]
          Length = 333

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 14/233 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + L    + ++ ++ + +    +    Q    L+ A      GGK++R  LV   A
Sbjct: 12  EQLAAHLATKMEAVNVLIRERMASRHAPRIPQVTAHLVEA------GGKRLRPMLVLATA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  DLCGYDGPFDVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   AF+++  P +     +R   +LS       +G +  Q+   QD    E     + +
Sbjct: 124 LFARAFQLMVEPGS-----LRVLDILSNASATIAEGEVL-QLSAAQDLATTEDIYLQVVR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT AL   A E G ++A A ++  + L  +G+ LGI FQ+ DDLLD + D+ 
Sbjct: 178 GKTAALFSAATEVGGVIAGAPEDHVKALFEYGDALGIAFQIVDDLLDYQGDVK 230


>gi|227113448|ref|ZP_03827104.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 303

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              +KL  + +R + +L   +           +  L++A+ Y +LLGGK++R FLV    
Sbjct: 3   DFSTKLNAHYQRTNRMLGHFIADL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF +   +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 58  ELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 117

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P  Q+ D  R  ++  L H  G+ GM GGQ  D++ E   +D   +  
Sbjct: 118 LQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQAFDLEAEGHQVDLAALER 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A  +  +    L  +   +G+ FQ+ DD+LD   D     
Sbjct: 178 IHRHKTGALIRAAVRLGALAAGETGRDALPHLDRYANAIGLAFQVQDDILDVVGDSATTG 237

Query: 236 KK 237
           K+
Sbjct: 238 KR 239


>gi|300779369|ref|ZP_07089227.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
           35910]
 gi|300504879|gb|EFK36019.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
           35910]
          Length = 323

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 18/234 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           E   R   I+ D + +   +        L   + Y +  GGK++R  +V     +F  + 
Sbjct: 2   EFLDRYQQIVADAITK---YTFKDKPSELYEPMNYIISHGGKRLRPIMVLMACEMFGGDL 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A++   AIE  H ++LIHDD+  MD   +RR KPT+H  +     I++G+GL+  A++
Sbjct: 59  KEAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIHTLHGLNVGILSGDGLMLKAYK 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTG 186
                   L+  I    +   TH   L  +  GQ  DI  E    +       +   KTG
Sbjct: 117 FF----EDLEPEIFKACIRIFTHTGLL--LCEGQQYDINFETQKDVTFDDYIRMITYKTG 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            L   + E GA++A A   + + +  FG+++GI FQ+ DD LD   D     KK
Sbjct: 171 VLSASSFEIGALIAKADFKDAKAIFNFGKHIGIAFQIMDDYLDVFGDQAQFGKK 224


>gi|229828869|ref|ZP_04454938.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM
           14600]
 gi|229792032|gb|EEP28146.1| hypothetical protein GCWU000342_00954 [Shuttleworthia satelles DSM
           14600]
          Length = 305

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 138/240 (57%), Gaps = 11/240 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  +  +L+E +   + I+   L +   + +T     ++ A+ YAL+  GK++R  L+ E
Sbjct: 8   DMDVRRELEERTLEAEGIIRRFLPREEGYQKT-----IMEAMSYALMSPGKRLRPILMRE 62

Query: 61  CASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           CA+ F+     AL    AAIE IH YSL+HDDLP+MDN  +RRGKPT H ++ E   ++A
Sbjct: 63  CAACFDQTSPQALPFFMAAIEMIHAYSLVHDDLPAMDNDLLRRGKPTTHARFGEAMGVLA 122

Query: 120 GNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DET 175
           G+ LL YAFE  + S +T   +    + ++ L    G+ GM+GGQ++D++ E I   D+ 
Sbjct: 123 GDALLNYAFETALQSLETDGTNPAVHKSLILLARKAGIYGMIGGQVVDVESEHIQGMDKH 182

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++  I ++KTGAL+  A   GA++  A +++   +      +G+ FQ+ DD+LD   D  
Sbjct: 183 RLDFIHELKTGALIEAAMCIGALLGGADESQLLTVEQAAAKIGLAFQIEDDILDITGDEK 242


>gi|260590834|ref|ZP_05856292.1| polyprenyl synthetase [Prevotella veroralis F0319]
 gi|260537185|gb|EEX19802.1| polyprenyl synthetase [Prevotella veroralis F0319]
          Length = 324

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 74/228 (32%), Positives = 121/228 (53%), Gaps = 19/228 (8%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D++L +   ++     +R    L   I+Y L LGGK+IR  L+    +LF  +  + L  
Sbjct: 5   DEILYKVNDYINNISYNRKPWSLYEPIKYVLSLGGKRIRPTLMLLSYNLFKEDPESILSP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MD+  +RRG+ TVH+++D  TAI++G+ +L  AF+ ++   
Sbjct: 65  ACALETYHNYTLLHDDL--MDDAPLRRGQQTVHVRWDANTAILSGDSMLVLAFDRMAKCS 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192
                +   + +L L     L  +  GQ  D++ E  +   E +   + ++KT  L+  A
Sbjct: 123 -----DKYLREVLKLFTTTAL-EIGEGQQYDMEFETRNDVKEEEYIEMIRLKTSVLLACA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            + GA++A A + + E L  FGE +G+ FQL DD LD   D     KK
Sbjct: 177 MKIGALLADAPEEDAESLYKFGEQVGLAFQLQDDYLDVYGDPKVFGKK 224


>gi|170025469|ref|YP_001721974.1| geranyltranstransferase [Yersinia pseudotuberculosis YPIII]
 gi|169752003|gb|ACA69521.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 306

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +R++  L D +           N  L+ A+RY A++GGK++R +LV    
Sbjct: 9   DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++        AAIECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSFANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
           L T AF I++  P   + D  R  +++ L    G  GM  GQ LD++ E        +  
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A  A +     L  + E +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|241894940|ref|ZP_04782236.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
 gi|241871658|gb|EER75409.1| geranyltranstransferase [Weissella paramesenteroides ATCC 33313]
          Length = 290

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 85/221 (38%), Positives = 130/221 (58%), Gaps = 10/221 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           +I+  L++ L ++AS  +      L  A+RYA++ GGK++R  L       + +     L
Sbjct: 13  QIEHTLENELAKSASVAE------LQEAMRYAVMAGGKRLRPMLSLAVIQTYGLPVNEYL 66

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +V +AIE IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+ L   AFE ++ 
Sbjct: 67  KVASAIELIHTYSLIHDDLPAMDDDELRRGKPTTHRAFGEDTAILAGDALQPLAFEWLTD 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGALMC 190
               L D  R QL++++    G  GM+ GQ+LDI+        +     I   KTGAL+ 
Sbjct: 127 LDQPLNDAQRVQLVIAMAQAAGGAGMVAGQVLDIEAMKTSAVTLAETQAIHYHKTGALIA 186

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +A ++GAIMA+A+++ +  L  FG   G+ FQ+ DD+ D +
Sbjct: 187 YALQAGAIMANANEDIQNILHDFGMAYGLAFQIKDDIDDYQ 227


>gi|238787986|ref|ZP_04631782.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641]
 gi|238723934|gb|EEQ15578.1| Geranyltranstransferase [Yersinia frederiksenii ATCC 33641]
          Length = 306

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +R++  + D +           N  L+ A+RY A+LGGK++R +LV    
Sbjct: 9   DFNQQLAAHQQRVNQAILDFIAPL-----PFGNSDLVKAMRYGAVLGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++        AAIECIH YSL+HDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSLANLDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123

Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++ SP   + D  R  ++  L +  G+ GM GGQ LD++ E   I    +  
Sbjct: 124 LQTLAFSILAESPMPDVADKDRLSMIAELAYASGVAGMCGGQALDLEAEARQISLDDLEQ 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A A        L  +   +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGAPGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|261822523|ref|YP_003260629.1| geranyltranstransferase [Pectobacterium wasabiae WPP163]
 gi|261606536|gb|ACX89022.1| Polyprenyl synthetase [Pectobacterium wasabiae WPP163]
          Length = 303

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++L  + +R + +L   +           +  L++A+ Y +LLGGK++R FLV    
Sbjct: 3   DFNTQLNAHYQRTNRMLGHFIADL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF +   +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 58  ELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 117

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P  Q+ D  R  ++  L H  G+ GM GGQ  D++ E   +D   +  
Sbjct: 118 LQTLAFSILADAPMPQVSDRDRLAMLSELAHASGVAGMCGGQSFDLEAEGHQVDLVALER 177

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA  A  A +     L  +   +G+ FQ+ DD+LD   D     
Sbjct: 178 IHRHKTGALIRAAVRLGAFAAGDAGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTG 237

Query: 236 KK 237
           K+
Sbjct: 238 KR 239


>gi|260580726|ref|ZP_05848552.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           RdAW]
 gi|260092543|gb|EEW76480.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           RdAW]
          Length = 296

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|161506132|ref|YP_001573244.1| hypothetical protein SARI_04320 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867479|gb|ABX24102.1| hypothetical protein SARI_04320 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 498

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 15/241 (6%)

Query: 3   GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58
           G +      N ++I+ +   D+    A+ ++  ++D +L++ + Y ++  GGK+IR  + 
Sbjct: 168 GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIA 227

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A          + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++
Sbjct: 228 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 285

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ D  I E    
Sbjct: 286 VGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYM 339

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
            +   KT  L   A +   I+A  +  +++ L+ +G  LG  FQL DDLLD   D   L 
Sbjct: 340 RVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGKHLG 399

Query: 236 K 236
           K
Sbjct: 400 K 400


>gi|116511680|ref|YP_808896.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107334|gb|ABJ72474.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 301

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 11/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77
           L+  L +   +   +    L    +Y+L+ GGK+IR  L       F++   TA  +V A
Sbjct: 24  LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 81

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRGK T H ++DE TAI+AG+ L    F ++SS  + 
Sbjct: 82  ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSS--SD 139

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
           L       L   L +  G  GM+ GQ+LD+  E   +  TQ+  I ++KTG L+ F   +
Sbjct: 140 LSAQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVA 199

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             I+A  +  E E+LR  G+ LG+ FQ+ DD+LD      +L K
Sbjct: 200 AGIVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 243


>gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
 gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
          Length = 293

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 121/235 (51%), Gaps = 11/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++   +R++T LD  L   A+   T     L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLERVETALDHYLPGEATEPAT-----LHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF  ++S    L    ++ L+  L    G  GM GGQ +D+      +  TQ+  + 
Sbjct: 118 QSQAFVALTSD--VLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRTQLETMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+          R L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 RMKTGALLRAAVRMGALAGETPDAAAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230


>gi|28897461|ref|NP_797066.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260876421|ref|ZP_05888776.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034]
 gi|28805673|dbj|BAC58950.1| geranyltranstransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308092915|gb|EFO42610.1| geranyltranstransferase [Vibrio parahaemolyticus AN-5034]
          Length = 294

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  + N+++++  L+ L               L+ A++Y  LLGGK++R FLV 
Sbjct: 1   MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF II+  P +   +N R  ++ +L H+ G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231


>gi|218132228|ref|ZP_03461032.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992887|gb|EEC58887.1| hypothetical protein BACPEC_00085 [Bacteroides pectinophilus ATCC
           43243]
          Length = 307

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 15/241 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L   ++ I+ I+   L       +   +  +  A+ Y+++ GGK+IR  +++E   
Sbjct: 10  FKDMLNNKAEAINDIIKGFLP-----AEDTMSCEVEKAMNYSVMAGGKRIRPLIMSEAYK 64

Query: 64  LFNVNHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           L   +   A        AA+E IH YSL+HDDLP+MDN   RRG+ T H  + E   I+A
Sbjct: 65  LCGGSEECAAQVLHPFMAALEFIHTYSLVHDDLPAMDNDMYRRGQLTTHAAFGEDMGILA 124

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLS---LTHNIGLQGMLGGQMLDIQDEFIDET- 175
           G+ LL YA+E +      + D  R + + +   +    G+ GM+GGQ LD++   +    
Sbjct: 125 GDALLNYAYETMLRAACDMTDTYRERSIRAASVIAGKAGIYGMVGGQTLDVKLTGMPMNA 184

Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            Q+  I ++KTGAL+  A  +GAI+A A      +L   G+ +G+ FQ+ DD+LD   D 
Sbjct: 185 GQLDYIFRLKTGALIEAAFMAGAILAGAPDEVTAKLEKAGDLVGVAFQIQDDILDVTGDA 244

Query: 235 P 235
            
Sbjct: 245 E 245


>gi|227327511|ref|ZP_03831535.1| geranyltranstransferase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 303

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 132/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++L  + +R + +L   +           +  L++A+ Y +LLGGK++R FLV    
Sbjct: 3   DFSTQLNAHYQRTNRMLGHFIASL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF ++  +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 58  ELFGMSLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 117

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P  Q+ D  R  ++  L H  G+ GM GGQ  D++ E   +D   +  
Sbjct: 118 LQTLAFSILADAPMPQVSDRDRLAMISELAHASGVAGMCGGQAFDLEAEGHQVDLAALER 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A  +       L  +   +G+ FQ+ DD+LD   D     
Sbjct: 178 IHRHKTGALIRAAVRLGALAAGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTG 237

Query: 236 KK 237
           K+
Sbjct: 238 KR 239


>gi|51595290|ref|YP_069481.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 32953]
 gi|153948033|ref|YP_001402071.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758]
 gi|186894307|ref|YP_001871419.1| geranyltranstransferase [Yersinia pseudotuberculosis PB1/+]
 gi|51588572|emb|CAH20180.1| geranyltranstransferase (farnesyldiphosphate synthase) [Yersinia
           pseudotuberculosis IP 32953]
 gi|152959528|gb|ABS46989.1| geranyltranstransferase [Yersinia pseudotuberculosis IP 31758]
 gi|186697333|gb|ACC87962.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 306

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +R++  L D +           N  L+ A+RY A++GGK++R +LV    
Sbjct: 9   DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++        AAIECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
           L T AF I++  P   + D  R  +++ L    G  GM  GQ LD++ E        +  
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A  A +     L  + E +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|218463158|ref|ZP_03503249.1| geranyltranstransferase protein [Rhizobium etli Kim 5]
          Length = 304

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 119/236 (50%), Positives = 167/236 (70%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N++ I+ +LD LLL  A   +    + L SA+ YA+L GGK++R FLV E 
Sbjct: 6   DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVES 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+
Sbjct: 66  AALLGGDAKAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLTYAF+I+++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  
Sbjct: 126 SLLTYAFDIVAAPETALPDASKASLVLALARAAGLGGMAGGQALDLAAEKQAQDEAGIIR 185

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GAI+A + Q+++ RLR FGE +G+ FQLADD+LD   D  
Sbjct: 186 LQAMKTGALIRFACEAGAIIAGSPQDDRRRLRAFGEKIGLAFQLADDILDLTSDAA 241


>gi|85058635|ref|YP_454337.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans']
 gi|84779155|dbj|BAE73932.1| geranyltranstransferase [Sodalis glossinidius str. 'morsitans']
          Length = 300

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 10/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L+ + +++D  L+  L   A+         L+ A+R+ ALLGGK++R FLV +  
Sbjct: 3   DFARALENSRQQVDAALERYLSVLANPQAP-----LIQAMRHGALLGGKRLRPFLVYQTG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF +   +     AAIECIH YSLIHDDLP+MDN  +RRG PT H+++ E TAI+AG+ 
Sbjct: 58  RLFGLTAASLDAPAAAIECIHAYSLIHDDLPAMDNDALRRGLPTCHVKFGETTAILAGDA 117

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  +   +    R Q++ +L    G  GM  GQ LD++ E   +   ++  
Sbjct: 118 LQTLAFSILADVEMPKVSPQDRLQMISALAAASGADGMCLGQALDLEAEGQQVSAARLET 177

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I + KTGAL+  A   G + A          L  F   +G+ FQ+ DD+LD   D
Sbjct: 178 IHRHKTGALIRSAVRMGVLAAGERGGPALRYLDRFAAAIGLAFQVQDDILDVVGD 232


>gi|125624487|ref|YP_001032970.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493295|emb|CAL98263.1| geranyltranstransferase [Lactococcus lactis subsp. cremoris MG1363]
          Length = 301

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 11/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77
           L+  L +   +   +    L    +Y+L+ GGK+IR  L       F++   TA  +V A
Sbjct: 24  LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 81

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRGK T H ++DE TAI+AG+ L    F ++SS  + 
Sbjct: 82  ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSS--SD 139

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
           L       L   L +  G  GM+ GQ+LD+  E   +  TQ+  I ++KTG L+ F   +
Sbjct: 140 LSAQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVA 199

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             I+A  +  E E+LR  G+ LG+ FQ+ DD+LD      +L K
Sbjct: 200 AGIVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 243


>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 295

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  LD L    A  +     DRL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALDGLFQAPAPEL-----DRLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|297183903|gb|ADI20025.1| geranylgeranyl pyrophosphate synthase [uncultured gamma
           proteobacterium EB000_65A11]
          Length = 321

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 15/232 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+    + ++ +   +D ++   L+ T   +  + +  L+ A      GGK++R  LV  
Sbjct: 1   MDHPFYTTVKTDFSAVDVLIKSSLV-TRVPLVEEISTYLIEA------GGKRLRPLLVLL 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   N      + +   IE +H   L+HDD+  +D   +RRG+ TV+  +    +++ G
Sbjct: 54  AARACNYQQHQHINLATIIEFLHTAMLLHDDV--VDESDLRRGRKTVNAAWGNPASVLVG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L + AFE++         ++R   +LS   N   +G +  Q+ +I++    E     +
Sbjct: 112 DFLHSRAFEMMVEIG-----DLRVMEILSHATNTIAEGEV-QQLGNIRNPDATEQSYIEV 165

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT  L   A  SGA++A AS  ++  L+ +G +LG+ FQL DD+LD E 
Sbjct: 166 INRKTAMLFEAASHSGAVLAGASPEQELSLQQYGCHLGVAFQLIDDILDYEG 217


>gi|304413337|ref|ZP_07394810.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola
           LSR1]
 gi|304284180|gb|EFL92573.1| octaprenyl diphosphate synthase [Candidatus Regiella insecticola
           LSR1]
          Length = 327

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 23/234 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL------------GGKKIRSFLVTECASLF 65
           +ILD++   TA  M T  ND +   +R  +             GGK+IR  +    A   
Sbjct: 6   SILDEVKELTAKDMATV-NDTIEEQMRSDVALITEISHYIINNGGKRIRPMIAILVAQAL 64

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  + +   IE IH  +L+HDD+  +DN  +RRGK TV+ Q+    +++ G+ + T
Sbjct: 65  GYKGNQHITIAVLIEFIHTATLLHDDV--VDNSDLRRGKATVNAQFGNAASVLVGDFIYT 122

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AF++++   +     +R   ++S   N+  +G +  Q+++ +D  I E     +   KT
Sbjct: 123 RAFQMMTQLGS-----MRVLEVMSTATNMIAKGEV-QQLINCKDPRITEENYLSVIGSKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPKK 237
             L   A +S AI+A A++ ++  L+ +G ++GI FQL DDLLD   E    KK
Sbjct: 177 AKLFEAASQSSAILAGANKEKELALQRYGHHIGIAFQLIDDLLDYSPENSTGKK 230


>gi|281423539|ref|ZP_06254452.1| polyprenyl synthetase [Prevotella oris F0302]
 gi|281402359|gb|EFB33190.1| polyprenyl synthetase [Prevotella oris F0302]
          Length = 323

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 118/235 (50%), Gaps = 22/235 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E   +++  LD+L          +    L   ++Y L +GGK+IR  L+     LF  +
Sbjct: 4   EELLVKVNDFLDNLKYD-------RKPSGLYDPVKYVLSMGGKRIRPVLMLLSYGLFKDD 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             + L    A+E  H Y+L+HDDL  MDN  +RRG  TVH ++D  TAI++G+ +L  A+
Sbjct: 57  VESVLMPACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAY 114

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKT 185
           E ++        ++        T       +  GQ  D++ E    + E +   + ++KT
Sbjct: 115 ERMAKCNPVYLSDVL------HTFTETALEIGEGQQYDMEFETRNDVTEDEYIEMIRLKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
             L+  A + GAI+A AS+ +++ L  FGE +G+ FQL DD LD   D     KK
Sbjct: 169 SVLLACAQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223


>gi|187921415|ref|YP_001890447.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
 gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
          Length = 293

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/235 (34%), Positives = 122/235 (51%), Gaps = 11/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++   +R++T L+  L   A+   T     L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLERVETALEYYLPTEATEPAT-----LHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF  ++S    L    ++ L+  L    G  GM GGQ +D+      +  TQ+  + 
Sbjct: 118 QSQAFVSLTSD--VLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTRTQLETMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+       +  R L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 RMKTGALLRAAVRMGALAGETPDADAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230


>gi|34498146|ref|NP_902361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
 gi|34104001|gb|AAQ60361.1| geranyltranstransferase [Chromobacterium violaceum ATCC 12472]
          Length = 298

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 88/238 (36%), Positives = 129/238 (54%), Gaps = 9/238 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           N      +    + ++  L+ LL             RL  A+RYA L GGK++R  LV  
Sbjct: 3   NESFIGWMTSIQQYMEQALEKLLPSADCA-----PQRLHEAMRYATLEGGKRVRPLLVFA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L         R+GAA+E +H YSL+HDD+P MDN  +RRGKPT HI YD+ TA++ G
Sbjct: 58  AGELVGAQADNLARIGAALEMVHAYSLVHDDMPCMDNDVLRRGKPTCHIAYDDATALLVG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVF 178
           + L T AFE+IS P   +    + +++ +L H  G  GM GGQ +D+    +  T  ++ 
Sbjct: 118 DALQTRAFELISQPMPDIAPASQLEMVRALAHAAGHAGMAGGQAIDLASVGLPLTLPELE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A  +G++     S  EKE L  F + +G+ FQ+ DD+LDCE D  
Sbjct: 178 FMHMLKTGALIRAAVLAGSMAGRELSAAEKEALDAFAKRIGLAFQVVDDILDCEADTA 235


>gi|24379060|ref|NP_721015.1| putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
 gi|24376957|gb|AAN58321.1|AE014902_9 putative farnesyl diphosphate synthase [Streptococcus mutans UA159]
          Length = 289

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 130/235 (55%), Gaps = 15/235 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN- 66
           +++  K I+  +         + QT  +  L+ A+ Y++  GGK+IR  L+ E    F  
Sbjct: 1   MKDKIKSINQAIKHY------YAQTHVSQDLIEAVLYSVDAGGKRIRPLLLLEILQGFGL 54

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V      +V A++E IH  SL+HDDLP+MDN   RRG+ T H ++ E TAI+AG+ L   
Sbjct: 55  VLTEAHYQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGEATAILAGDSLFLD 114

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
            F +++  K  L+ +I+ +L+  L+   G  GM+GGQMLDI+ E   ++  Q+  I   K
Sbjct: 115 PFGLLA--KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           TG L+ F   +  I+A  S+    RLR  GE +G+ FQ+ DD+LD      +L K
Sbjct: 173 TGKLLTFPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGK 227


>gi|323140954|ref|ZP_08075866.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067]
 gi|322414557|gb|EFY05364.1| geranyltranstransferase [Phascolarctobacterium sp. YIT 12067]
          Length = 291

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 14/239 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              +      K ++  L + + +           ++  A+ Y+L+ GGK+IR  L+   A
Sbjct: 2   DFKAYYANQQKLVENYLKNRIAKKGIS-------KVDEAMEYSLMAGGKRIRPILLMAAA 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     L V   +E IH YSLIHDDLP MD+   RRG+ T H  + E  A++AG+G
Sbjct: 55  EAVGSKGYNYLPVACGLEMIHTYSLIHDDLPCMDDDDYRRGRLTNHKVFGEAMAVLAGDG 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLT AFE++   K  +   +  + +  +    G  GM+GGQ LD++ E   I   ++  +
Sbjct: 115 LLTLAFEVMLEQKN-VDPKVLIETVREMAMCAGNFGMVGGQGLDLEFEGKKITPEELRKL 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
              KTGAL   A   GA +A A+  +   L  F + LG+ FQ+ DD+LD E    +L K
Sbjct: 174 HAGKTGALFIAAIRGGAHLAGANDQQLLALTKFADLLGLAFQITDDILDVEGTEEELGK 232


>gi|308095603|ref|ZP_05907188.2| geranyltranstransferase [Vibrio parahaemolyticus Peru-466]
 gi|308125727|ref|ZP_05776964.2| geranyltranstransferase [Vibrio parahaemolyticus K5030]
 gi|308086887|gb|EFO36582.1| geranyltranstransferase [Vibrio parahaemolyticus Peru-466]
 gi|308113754|gb|EFO51294.1| geranyltranstransferase [Vibrio parahaemolyticus K5030]
          Length = 295

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  + N+++++  L+ L               L+ A++Y  LLGGK++R FLV 
Sbjct: 2   MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 53  ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 112

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF II+  P +   +N R  ++ +L H+ G  GM  GQ LD   ++  +   +
Sbjct: 113 GDALQTLAFTIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 173 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 232


>gi|269958629|ref|YP_003328416.1| geranyltranstransferase [Anaplasma centrale str. Israel]
 gi|269848458|gb|ACZ49102.1| geranyltranstransferase [Anaplasma centrale str. Israel]
          Length = 290

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 86/232 (37%), Positives = 127/232 (54%), Gaps = 4/232 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S +++  +    ++   L+Q AS      +  L  A+ Y +   GK IRSFL +  A +F
Sbjct: 10  SDIRQKVEDFSCLVRKELVQIASTKAECPSTVLYEALSYTISNPGKCIRSFLASTSARVF 69

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            V+    LR+GAAIE +H YSL+HDDLPSMDN   RRG+ + H ++ E  A++ G+ LLT
Sbjct: 70  GVSAERTLRLGAAIEAVHAYSLVHDDLPSMDNSPTRRGRESCHTKFGEAVAVLTGDALLT 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMK 184
             FE++S+        +R +++  L+   G  GM+ GQ LDI+         V  I ++K
Sbjct: 130 LTFELLSTMDEGCA--VRCKIIELLSKACGRCGMVAGQALDIEAHSSTSFEGVRRIHELK 187

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T  L   ACE+GA++  AS  E+  L  +G  LG  FQ  DDL D  ED  +
Sbjct: 188 TARLFSAACEAGAVLGGASTKERAALAEYGSALGCAFQAKDDLNDAGEDSER 239


>gi|297621395|ref|YP_003709532.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044]
 gi|297376696|gb|ADI38526.1| Farnesyltranstransferase [Waddlia chondrophila WSU 86-1044]
          Length = 294

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/240 (39%), Positives = 138/240 (57%), Gaps = 13/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           +N  L S +      I+  L+ L+   +       +  L  A RYALL GGK+IR  L  
Sbjct: 4   VNHDLTSYI----TLIENKLEALIPSCSGA-----DACLYEAARYALLGGGKRIRPILTL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A LFN +   AL    AIE IH YS+IHDDLP MD+   RRGKP++H Q++E  A++ 
Sbjct: 55  ATAKLFNADIEAALVPACAIEMIHTYSVIHDDLPCMDDDDFRRGKPSLHKQFNEALAVLT 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+ LLT AFE+IS  + QL   ++  L+ ++    G +GM+GGQ++DI  E   +D  Q+
Sbjct: 115 GDFLLTRAFEVISEDR-QLNVEMQIDLIRTIACASGGKGMIGGQVIDISSEGKGLDLKQL 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
             +   KTGAL+  A E G I+A AS  E++    F +++G+ FQ+ DDLLD    + K+
Sbjct: 174 QHLHAKKTGALITAAVECGCIVASASDEERQPALQFAQDIGLAFQIVDDLLDITSGVKKR 233


>gi|114766799|ref|ZP_01445733.1| decaprenyl diphosphate synthase [Pelagibaca bermudensis HTCC2601]
 gi|114540993|gb|EAU44051.1| decaprenyl diphosphate synthase [Roseovarius sp. HTCC2601]
          Length = 331

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 13/234 (5%)

Query: 5   LPSKLQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           + + +Q+   R+ T+L    D +       M ++H  R+     + +  GGK++R  L  
Sbjct: 1   MDTPMQKPHDRLATLLSGDMDGVNALIRERMASKHAPRIPEVTAHLVEAGGKRLRPLLTL 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ 
Sbjct: 61  ASARLCGYEGPFHVHLAATVEFIHTATLLHDDV--VDESKQRRGRPTANLLWDNKSSVLV 118

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   AF+++  P      N+R   +LS       +G +  Q+   QD   +E     
Sbjct: 119 GDYLFARAFQLMVEPG-----NLRVLNILSNAAATIAEGEVL-QLTAAQDLRTNEDIYLQ 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT AL   A E G ++A   + + + L  +G+ LGI FQ+ DDLLD + D
Sbjct: 173 VVRGKTAALFSAATEVGGVIAGVEEEQVQALFDYGDALGIAFQIVDDLLDYQGD 226


>gi|27362941|gb|AAN86974.1| multifunctional geranylgeranyl pyrophosphate synthase [Sulfolobus
           shibatae B12]
          Length = 331

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 17/242 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L S   +    ++  + + +      ++        ++      GGK++R  ++  
Sbjct: 1   MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L   +   A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG
Sbjct: 54  SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + L   AFE ++     L  N   +      ++I +  +  GQ +D+  E    + E + 
Sbjct: 112 DYLHAKAFEALNEALKGLDGNTFYKAFSVFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
             + K KT  L   +   G I+  AS +  + L  +G NLGI FQ+ DD+L    D   L
Sbjct: 170 MQMIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDQKEL 229

Query: 235 PK 236
            K
Sbjct: 230 GK 231


>gi|114771291|ref|ZP_01448711.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha
           proteobacterium HTCC2255]
 gi|114548216|gb|EAU51103.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [alpha
           proteobacterium HTCC2255]
          Length = 329

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 17/238 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
              L S L  +  ++++++   +   A+    +  + L+ A      GGK++R  L    
Sbjct: 7   QDQLASLLNHDMVKVNSLIKKRMASDAAPRIPEVTEHLIDA------GGKRLRPLLTLAA 60

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A +        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+
Sbjct: 61  AEMCGNTSPYHIHLAATVEFIHTATLLHDDV--VDESKQRRGRPTANLLWDNQSSVLVGD 118

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + +F+++         N+R   +L+       +G +  Q+   Q+    E     + 
Sbjct: 119 YLFSRSFQLMVETG-----NLRVLDILANASATIAEGEVL-QLTVAQNLSTTEDTYLKVI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + KT AL   AC+ G ++++A +   + L  +G+ LG+ FQ+ DDLLD      DL K
Sbjct: 173 RGKTAALFGAACKVGGVISNAEEKIIDALASYGDALGVCFQITDDLLDYNGSSADLGK 230


>gi|300071276|gb|ADJ60676.1| farnesyl-diphosphate synthase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 285

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 11/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGA 77
           L+  L +   +   +    L    +Y+L+ GGK+IR  L       F++   TA  +V A
Sbjct: 8   LEHFLTEF--YESAEFPKGLAEPAKYSLMAGGKRIRPLLFLNLLEAFDLEVTTAHYQVAA 65

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRGK T H ++DE TAI+AG+ L    F ++SS  + 
Sbjct: 66  ALEMIHTGSLIHDDLPAMDNDDYRRGKLTNHKKFDEATAILAGDTLFFDPFYVLSS--SD 123

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
           L       L   L +  G  GM+ GQ+LD+  E   +  TQ+  I ++KTG L+ F   +
Sbjct: 124 LSAQTIVSLTRELAYASGSYGMVAGQILDMAGEGKDLTLTQIEQIHRLKTGRLLTFPFVA 183

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             I+A  +  E E+LR  G+ LG+ FQ+ DD+LD      +L K
Sbjct: 184 AGIVAQKTNQEIEKLRVVGQILGLAFQIRDDILDVTATFAELGK 227


>gi|261341013|ref|ZP_05968871.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
 gi|288316878|gb|EFC55816.1| geranyltranstransferase [Enterobacter cancerogenus ATCC 35316]
          Length = 299

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 135/242 (55%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++LQ    R +  L   +       Q   N  L+ A+ Y ALLGGK++R FLV    
Sbjct: 2   DFATELQARVVRANDALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F ++  T     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 57  NMFGISDATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S  P  ++ D  R  ++  L    G+ GM GGQ LD++ E   ++  Q+  
Sbjct: 117 LQTLAFSILSDAPMVEVSDRYRLAMVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLER 176

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|251782890|ref|YP_002997193.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391520|dbj|BAH81979.1| dimethylallyltransferase/ geranyltranstransferase [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 290

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|15675402|ref|NP_269576.1| putative geranyltranstransferase [Streptococcus pyogenes M1 GAS]
 gi|71911044|ref|YP_282594.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
           pyogenes MGAS5005]
 gi|13622588|gb|AAK34297.1| putative geranyltranstransferase (farnesyl diphosphate synthase)
           [Streptococcus pyogenes M1 GAS]
 gi|71853826|gb|AAZ51849.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
           pyogenes MGAS5005]
 gi|323127694|gb|ADX24991.1| dimethylallyltransferase/geranyltranstransferase [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 290

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLAFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALITEQAMTVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|94990756|ref|YP_598856.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus
           pyogenes MGAS10270]
 gi|94544264|gb|ABF34312.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           pyogenes MGAS10270]
          Length = 290

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
 gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1]
          Length = 295

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 134/241 (55%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +    +  R++  L+ L       +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   IAAYSATSQARVNAALETLFNAPLPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H ++DE  AI+AG+GL
Sbjct: 57  ALGGKAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  +  P+ + L  +IR Q + +L H  G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFSALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  + + GA+ +  A ++E + L+ + + +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEVSVKLGALASGCAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|114330832|ref|YP_747054.1| farnesyltranstransferase [Nitrosomonas eutropha C91]
 gi|114307846|gb|ABI59089.1| Farnesyltranstransferase [Nitrosomonas eutropha C91]
          Length = 322

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 13/218 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           D ++Q   H Q     ++   I ++  GGK++R  LV   A L++        + A +E 
Sbjct: 18  DNVIQQKLHSQVVLVRQVSEYIIHS--GGKRLRPALVILAAGLYDYKGTHHYNLAAVVEF 75

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  +L+HDD+  +D   +RR + T +  +    +++ G+ L + AF+++        DN
Sbjct: 76  IHTATLLHDDV--VDESQLRRNQATANALFGNAASVLVGDFLYSRAFQMMVE-----VDN 128

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +R   +L+   N   +G +  Q+L+ +D  ++E     + + KT  L   A   GAI+  
Sbjct: 129 MRVMEVLADATNTIAEGEVL-QLLNCRDPDVEEENYLQVIRFKTAKLFEAAGRLGAILGG 187

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           A+  E+E L  +G +LG  FQL DDLLD      D  K
Sbjct: 188 ATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDHDTGK 225


>gi|126740547|ref|ZP_01756234.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
 gi|126718348|gb|EBA15063.1| decaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
          Length = 332

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 116/232 (50%), Gaps = 16/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L    + +++++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 13  LAATLSSEMEAVNSLI-------QTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L        +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 66  LCGYEGEHHIKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + +F+++    +     ++   +L+       +G +  QM    +   DE     + + 
Sbjct: 124 FSRSFQLMVETGS-----LKVLDILANASATIAEGEVL-QMTAASNLATDEAVYLQVVRG 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT AL   A E G ++A AS+ E + L  +G+ LGI FQ+ADDLLD + D  
Sbjct: 178 KTAALFSAATEVGGVIAGASETEIKALFDYGDALGIAFQIADDLLDYQGDSK 229


>gi|19746452|ref|NP_607588.1| geranyltranstransferase [Streptococcus pyogenes MGAS8232]
 gi|306827052|ref|ZP_07460350.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782]
 gi|19748654|gb|AAL98087.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS8232]
 gi|304430798|gb|EFM33809.1| geranyltranstransferase [Streptococcus pyogenes ATCC 10782]
          Length = 290

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +  +Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLSQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|331002440|ref|ZP_08325958.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410256|gb|EGG89690.1| hypothetical protein HMPREF0491_00820 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 296

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 122/236 (51%), Gaps = 15/236 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E  K+ID+I++        + +   N ++++A   A+  GGK++R  ++ E        
Sbjct: 3   KEKIKKIDSIIESFF-----YAEDGLNKKVITASNEAIKNGGKRLRPLIMFEIYRAVAGE 57

Query: 69  HLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 +    AAIE IH +SLIHDDLP+MDN  +RRGKPT  + Y E  AI+AG+ L  
Sbjct: 58  EYREEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLCV 117

Query: 126 YAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
            AFEIIS     + D       S+ + +L +  G  GM+GGQ +D     + + E  +  
Sbjct: 118 QAFEIISKKMQDVDDINILKRMSKALYTLANATGALGMIGGQCVDVEYCGKRMSEDVLRY 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             ++KTGAL+  +   G I+A A+  E   L+  G  +G  FQ+ DD LD   D  
Sbjct: 178 TYELKTGALLQASFVIGGILAGANDKETRLLKKAGSYIGEAFQIRDDYLDIVADEK 233


>gi|94988855|ref|YP_596956.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429]
 gi|94992746|ref|YP_600845.1| dimethylallyltransferase / geranyltranstransferase [Streptococcus
           pyogenes MGAS2096]
 gi|94542363|gb|ABF32412.1| dimethylallyltransferase [Streptococcus pyogenes MGAS9429]
 gi|94546254|gb|ABF36301.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           pyogenes MGAS2096]
          Length = 290

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|21910690|ref|NP_664958.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315]
 gi|28895620|ref|NP_801970.1| geranyltranstransferase (farnesyl diphosphate synthase)
           [Streptococcus pyogenes SSI-1]
 gi|21904893|gb|AAM79761.1| putative geranyltranstransferase [Streptococcus pyogenes MGAS315]
 gi|28810869|dbj|BAC63803.1| putative geranyltranstransferase (farnesyl diphosphate synthase)
           [Streptococcus pyogenes SSI-1]
          Length = 290

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTDQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|295695407|ref|YP_003588645.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912]
 gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Bacillus tusciae DSM 2912]
          Length = 295

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 13/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L    +  ++ +D  LD L+         +   RL  A+RY+L  GGK++R  L  
Sbjct: 1   MERELREFWEAGARAVDDALDALIP------PGKGAGRLHEAMRYSLFAGGKRLRPLLAM 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                   +   AL    A+E +H YSLIHDDLP+MD+   RRG+PT H  + E  A++A
Sbjct: 55  AACEGAGGSLREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DET 175
           G+ LLT AF +++  K  L    R +L+  L    G  GM+GGQ LDI+        D  
Sbjct: 115 GDALLTLAFGVLA--KAPLPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPE 172

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +  + + KTGAL+  +   G + A A ++  +RL  +G+ +G+ +Q+ DDLLD   D
Sbjct: 173 LLRDLHRKKTGALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGD 230


>gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           R3021]
 gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           R3021]
          Length = 296

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|326572218|gb|EGE22213.1| geranyltranstransferase [Moraxella catarrhalis BC8]
          Length = 328

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 24/254 (9%)

Query: 7   SKLQENSKRIDTILD---DLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTE 60
           +   +N+K +D +     + L +    + TQ    + L +A RYA+  GGK++R  L   
Sbjct: 15  TAFIQNAKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKRVRPLLALS 74

Query: 61  CASLF--NVNHLTAL-----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +     +H               R   A+E IH YSLIHDDLP MD+  +RRG+PT 
Sbjct: 75  TFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTC 134

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           HI Y E  A++AG+ L + AFE++S    +   +      L+   +   + M+ GQMLDI
Sbjct: 135 HIVYGEDIALLAGDALQSIAFEVLSEYYEEAPADEAVAYRLTQILSTRARRMVSGQMLDI 194

Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + E   + + ++  I + KTGAL+  +   GA+ A A       L+ +   +G+ FQ+ D
Sbjct: 195 KGENQVLTQDELEAIHRDKTGALIEASVMMGAVCAGAQTAALGHLKRYARAIGLAFQVQD 254

Query: 226 DLLDCEED---LPK 236
           D+LD   D   L K
Sbjct: 255 DVLDITTDTITLGK 268


>gi|50914597|ref|YP_060569.1| dimethylallyltransferase [Streptococcus pyogenes MGAS10394]
 gi|50903671|gb|AAT87386.1| Dimethylallyltransferase [Streptococcus pyogenes MGAS10394]
          Length = 290

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|56808396|ref|ZP_00366148.1| COG0142: Geranylgeranyl pyrophosphate synthase [Streptococcus
           pyogenes M49 591]
          Length = 290

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|330505134|ref|YP_004382003.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
 gi|328919420|gb|AEB60251.1| farnesyl-diphosphate synthase [Pseudomonas mendocina NK-01]
          Length = 295

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 74/236 (31%), Positives = 130/236 (55%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +  +    R+DT L+ L     + +     +RL  A+RY+++ GGK++R  LV     
Sbjct: 2   IAAYQKRCQTRVDTALEQLFQAPRTEL-----ERLYQAMRYSVMNGGKRVRPLLVYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE +AI+AG+ L
Sbjct: 57  ALEGDIERADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF +++  +   ++   R Q++  L+   G  GM+GGQ +D+      +D+  + ++
Sbjct: 117 QSLAFGVLADRRRNPQNTETRLQMVELLSQAAGPAGMVGGQAIDLGSVGLQLDQQALEIM 176

Query: 181 QKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  +   GA+ +  +    ++ L  +   +G+ FQ+ DD+LD E D  
Sbjct: 177 HRHKTGALIEASVALGALASGNTDELARKALLQYSRAIGLAFQVQDDILDVESDTA 232


>gi|326803324|ref|YP_004321142.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650194|gb|AEA00377.1| geranyltranstransferase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 299

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/235 (35%), Positives = 133/235 (56%), Gaps = 9/235 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+     ID  L+  L+   +H+     D LL+++RY+L  GGK++R  L+    + FN 
Sbjct: 3   LKSFRHSIDKDLEAALI---AHLGQDSQDSLLASMRYSLENGGKRLRPSLLLATLASFNY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   L    A+E IH YSLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ LLT A
Sbjct: 60  DYHLGLAPACAVEYIHTYSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDALLTLA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FE++S  + +    ++ +L+  L    G  GM+ GQ+LD+  E   +   ++  +   KT
Sbjct: 120 FEVLSQSQEETDPQLKLELVQLLAQAAGKSGMVDGQVLDMSSEEKHLTIEELKNLHGKKT 179

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237
           GAL+ FA  + A++    Q  ++ L  +  + GI +Q+ +DL +     E+  KK
Sbjct: 180 GALIHFAIMAAALIMDLDQAAQDSLASYAHHFGIAYQIQNDLQEVMWNDEERGKK 234


>gi|218289630|ref|ZP_03493850.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240280|gb|EED07463.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 291

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/231 (35%), Positives = 120/231 (51%), Gaps = 9/231 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           + + L+   + ++ +L  L   T  H       RL  A+ Y+L+  GK++R  LV   A 
Sbjct: 1   MQTYLEACKEAVNALLARLFEPTGLHA------RLKEAMNYSLMADGKRLRPALVIATAE 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F V     L   AA+E IHCYSLIHDDLP MD+  +RRG+PT H+ + E  A++AG+ L
Sbjct: 55  TFGVPRDRVLPAAAAVELIHCYSLIHDDLPCMDDDDLRRGQPTNHVVFGEAMALLAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT AF +++ P   +    +  ++ +L    G+ GM+GGQ +DI+          V  I 
Sbjct: 115 LTEAFHLLARPLEGVPAERQLAMIRTLASRAGVDGMVGGQAVDIERTGGQGTLQDVDFIH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT  L+    E G   A      +  L C+GE LG+ FQ+ DD+LD   
Sbjct: 175 LHKTARLIQACVEIGGYFADLDDQVRWALSCYGECLGLAFQMIDDVLDVTA 225


>gi|158426076|ref|YP_001527368.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571]
 gi|158332965|dbj|BAF90450.1| polyprenyl synthetase [Azorhizobium caulinodans ORS 571]
          Length = 311

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/229 (40%), Positives = 134/229 (58%), Gaps = 10/229 (4%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +  L + L       +      L++A+R+ +L GGK++R  LV E A+LF V    A+  
Sbjct: 20  EQRLIEALADAPLEGERTRPSHLMAAMRHGSLDGGKRLRPLLVVESAALFGVPLARAITA 79

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+EC+HCYSLIHDDLP+MDN  +RRG+PTVH+ + E TAI+AG+GLLT AF++++   
Sbjct: 80  AAALECVHCYSLIHDDLPAMDNDLLRRGRPTVHVAFGEETAILAGDGLLTLAFDLLAGED 139

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---------IDETQVFMIQKMKTG 186
                 +R  L+  L    G+ GM+GGQMLD+  E          + E  +  +Q MKTG
Sbjct: 140 AHPDAQVRIALVRLLARASGIGGMVGGQMLDLAAEGRFSGGTPQALSEADIRTLQAMKTG 199

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           AL+    E GA++  A    +  L  +G  LG+ FQ+ADD+LD E D  
Sbjct: 200 ALLRAGVEMGALLGGADAEARAALAAYGTALGVAFQIADDILDIEGDAA 248


>gi|119384763|ref|YP_915819.1| trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222]
 gi|119374530|gb|ABL70123.1| Trans-hexaprenyltranstransferase [Paracoccus denitrificans PD1222]
          Length = 333

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 9/233 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  +   L   S  +   +D +       M ++H  R+     + +  GGK++R  LV 
Sbjct: 3   MNENVSKPLDRLSAELAGDMDRVNALIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLVL 62

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L      + + + AA+E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ 
Sbjct: 63  AAARLCGYAGESHILLAAAVEFIHTATLLHDDV--VDESQQRRGRPTANLLWDNKSSVLV 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   +F++++  ++     ++   +L+       +G +  Q+   QD    E     
Sbjct: 121 GDYLFARSFQLMADTES-----MQVMRILANASATIAEGEVL-QLTAAQDVSTTEDTYIQ 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I + KT AL   A E+GA++A A    +  L  +G+ LGI FQ+ DDLLD   
Sbjct: 175 IVRGKTAALFSAATEAGAVVAGADPAVQRALFDYGDALGIAFQIVDDLLDYGG 227


>gi|299141403|ref|ZP_07034540.1| polyprenyl synthetase [Prevotella oris C735]
 gi|298577363|gb|EFI49232.1| polyprenyl synthetase [Prevotella oris C735]
          Length = 323

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 22/235 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E   +++  LD+L          +    L + ++Y L +GGK+IR  L+     LF  +
Sbjct: 4   EELLVKVNDFLDNLKYD-------RKPSGLYAPVKYVLSMGGKRIRPVLMLLSYGLFKDD 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             + L    A+E  H Y+L+HDDL  MDN  +RRG  TVH ++D  TAI++G+ +L  A+
Sbjct: 57  VESVLMPACALETYHNYTLLHDDL--MDNADMRRGHETVHRKWDANTAILSGDSMLVLAY 114

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKT 185
           E ++        ++        T       +  GQ  D++ E    + E +   + ++KT
Sbjct: 115 ERMAKCNPVYLSDVL------HTFTETALEIGEGQQYDMEFETRNDVTEDEYIEMIRLKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
             L+  A + GAI+A AS+ +++ L  FGE +G+ FQL DD LD   D     KK
Sbjct: 169 SVLLACAQKIGAILAGASKQDQDNLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223


>gi|150399805|ref|YP_001323572.1| polyprenyl synthetase [Methanococcus vannielii SB]
 gi|150012508|gb|ABR54960.1| Polyprenyl synthetase [Methanococcus vannielii SB]
          Length = 317

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/229 (34%), Positives = 116/229 (50%), Gaps = 19/229 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +    +ID+ L++ + +         +  L +A ++ L  GGK+IR +L      L   +
Sbjct: 5   RAILSKIDSELENYVEK---------DTNLYNASKHLLFAGGKRIRPYLSVLTYLLKRDD 55

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L    ++E IH Y+LIHDD+  MDN   RRGKPTVHI Y E TAI+AG+ L   AF
Sbjct: 56  ISEVLAPAISVELIHNYTLIHDDI--MDNDDERRGKPTVHIVYGEPTAILAGDLLYAKAF 113

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTG 186
           E +S+     K  +    +LS         +  GQ  D++  +EF    +   +   KTG
Sbjct: 114 EALSNIGDS-KKALEVLKVLSKA----CVEVCEGQTDDMEFENEFPTLEEYLSMISKKTG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           AL+    E GAIMA  S  E+E L  + + +G+ FQ+ DD+LD   D  
Sbjct: 169 ALIVAPIEIGAIMAECSSEEREALYNYAKRIGMTFQIQDDVLDLIGDQK 217


>gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
 gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
 gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
 gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
          Length = 296

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NALLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|21672714|ref|NP_660781.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25008653|sp|Q8K9A0|ISPA_BUCAP RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|21623357|gb|AAM67992.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 294

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/227 (33%), Positives = 125/227 (55%), Gaps = 10/227 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL 73
           RI+  L +++ +         +  L  A++Y+ L GGK++R+ L+      F VN     
Sbjct: 13  RINKKLFEIIQEL-----PFQDSVLFRAMKYSTLSGGKRLRACLIYATGETFQVNIAALD 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + AA+E +H YSLIHDDLP +DN Y RRGK + HI+Y E  A++AG+ L   AF I+S+
Sbjct: 68  VISAAVELVHSYSLIHDDLPCIDNDYFRRGKISCHIKYGENFALLAGDALQGLAFNILSN 127

Query: 134 PKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
                + D+IR +++   ++ IG  GM  GQMLD++ E   I+ +++  I   KT  L+ 
Sbjct: 128 SNMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDLEKERKKINISELEKINLYKTAFLIR 187

Query: 191 FACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +         + S+     L  F  ++G+ FQ+ DD+LD + D+ K
Sbjct: 188 CSIRLAYFASNNFSKEVLFILDKFSVSIGLAFQIQDDILDLKNDIKK 234


>gi|320161454|ref|YP_004174678.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
 gi|319995307|dbj|BAJ64078.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
          Length = 338

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 114/244 (46%), Gaps = 21/244 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL----------LGGKKIR 54
           L   +QE   RI+  L  ++  T+S     +  +L + +RY L            GK+IR
Sbjct: 3   LNQVVQEMLPRIEEELRQVIEATSSP----NTPQLSAMLRYHLGWEGEGTGQEAQGKRIR 58

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             LV   A         AL   AA+E +H +SLIHDD+   D   +RRG+PTV +++   
Sbjct: 59  PLLVLLSAQAVGGKWEQALPAAAAVELVHNFSLIHDDIQ--DQSTLRRGRPTVWVKWGIA 116

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID- 173
            AI AG+ + T AF  ++  +  +      +   S   +     +  GQ LD+  E +D 
Sbjct: 117 QAINAGDAMFTQAFWALNRLEQTISSQTALE--ASRILHQVCLRLTEGQYLDLAYEKVDT 174

Query: 174 --ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                 + +   KT AL+    E G + +HAS  ++  LR FGENLG+ FQ+ DD L   
Sbjct: 175 LPLEAYWPMVGGKTAALLGGCVELGGLCSHASPEQRTALREFGENLGLAFQVLDDWLGIW 234

Query: 232 EDLP 235
            D  
Sbjct: 235 GDAA 238


>gi|50120071|ref|YP_049238.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
 gi|49610597|emb|CAG74042.1| geranyltranstransferase [Pectobacterium atrosepticum SCRI1043]
          Length = 303

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++L  + +R + +L   +           +  L++A+ Y +LLGGK++R FLV    
Sbjct: 3   DFSAQLNAHYQRTNRMLGHFITSL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF++   +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E TAI+AG+ 
Sbjct: 58  ELFDMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEATAILAGDA 117

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P TQ+ D  R  ++  L    G+ GM GGQ  D++ E   ++   +  
Sbjct: 118 LQTLAFSILADAPMTQVSDRDRLAMISELAQASGVAGMCGGQAFDLEAEGHQVNLAALER 177

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A  A ++    L  +   +G+ FQ+ DD+LD   D     
Sbjct: 178 IHRHKTGALIRAAVRLGALAAGDAGRDALPYLDRYANAIGLAFQVQDDILDVVGDSATTG 237

Query: 236 KK 237
           K+
Sbjct: 238 KR 239


>gi|90408168|ref|ZP_01216336.1| geranyltranstransferase [Psychromonas sp. CNPT3]
 gi|90310698|gb|EAS38815.1| geranyltranstransferase [Psychromonas sp. CNPT3]
          Length = 296

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 122/233 (52%), Gaps = 9/233 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   L +   R D  L   +      +Q+     L  A+ + ALLGGK+IR FLV     
Sbjct: 4   LLKTLSQYQSRTDQQLTKYI-----DLQSPLCLSLNKAMYHGALLGGKRIRPFLVYVVGD 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +      T   +  A+EC+H YSLIHDDLP+MD+  +RRG+ T HI + E  AI+AG+ L
Sbjct: 59  MLGSQLSTLDPIACALECMHAYSLIHDDLPAMDDDALRRGQATCHIVFGEAQAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            + AF+I+S    +L  + + +++  L    G +GM  GQ LD   +++ +D T +  I 
Sbjct: 119 QSLAFDILSQENKELSCSAQLKMLNVLAKASGDKGMCAGQALDLAAENKRVDLTMLESIH 178

Query: 182 KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KTGAL+  A E   +         K+ L  +   +G+ FQ+ DD+LD   D
Sbjct: 179 RAKTGALIQAAVELATLTKVGLDSQHKQYLLTYARAIGLAFQVQDDILDITSD 231


>gi|259415043|ref|ZP_05738965.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B]
 gi|259348953|gb|EEW60707.1| octaprenyl-diphosphate synthase [Silicibacter sp. TrichCH4B]
          Length = 336

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 9/225 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
           ++ + + L+ + L     M ++H  R+     + +  GGK++R  L    A +       
Sbjct: 18  AETLASELEAVNLLIQERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYEGDH 77

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++
Sbjct: 78  HLKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYLFARSFQLM 135

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
               +     +R   +L+       +G +  QM    D    E     + + KT AL   
Sbjct: 136 VDTGS-----LRVLDILANASATIAEGEVL-QMTAATDLRTTEEIYLQVVRGKTAALFSA 189

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A E G ++A A+  + + L  +G+ LGI FQ+ADDLLD + D  K
Sbjct: 190 ATEVGGVIASATDAQVKALYDYGDALGIAFQIADDLLDYQGDTAK 234


>gi|300024283|ref|YP_003756894.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526104|gb|ADJ24573.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 301

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 100/239 (41%), Positives = 141/239 (58%), Gaps = 13/239 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           +L   +  ++  L + L +  ++       RL  A+R+A L GGK+ R FLV E A LF 
Sbjct: 7   QLGNAATAVEGFLAECLTEQQAN---GTPPRLADALRHAVLAGGKRFRPFLVFESAGLFG 63

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V    AL   AA+ECIHCYSL+HDDLP+MDN  +RRG+PTV   YDE TAI+ G+ L   
Sbjct: 64  VARDAALPAAAALECIHCYSLVHDDLPAMDNDELRRGQPTVWKAYDEWTAILVGDALQAI 123

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------TQVFMI 180
           AFE+ S P+       R++L  +L    G  GM+GGQMLD++   + +        +  +
Sbjct: 124 AFELTSDPRRHDDAEARAELTHALAIASGAIGMVGGQMLDLEAGRLPDQPAATIADIVRL 183

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           Q MKTG L+   CE GAI+  AS +++  L+ +GE+LG  FQ++DDLLD E    D+ K
Sbjct: 184 QAMKTGRLITVGCEMGAILGRASPSDRAALKTYGEHLGTAFQISDDLLDAEGSAADVGK 242


>gi|315652073|ref|ZP_07905074.1| geranyltranstransferase [Eubacterium saburreum DSM 3986]
 gi|315485720|gb|EFU76101.1| geranyltranstransferase [Eubacterium saburreum DSM 3986]
          Length = 297

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 15/236 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +++  +I+ +++        + + + N  ++ A   A+  GGK++R  ++ E     + +
Sbjct: 4   KDSLSKIEKLIESFF-----YNEDELNKNVIKASNEAIRNGGKRLRPLIMFETYKAISGD 58

Query: 69  HLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   +    AAIE IH +SLIHDDLP+MDN  +RRGKPT  + Y E  AI+AG+ L  
Sbjct: 59  EYSEEIIAPFLAAIEMIHTFSLIHDDLPAMDNDRLRRGKPTTWVSYGEDMAILAGDMLSV 118

Query: 126 YAFEIISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179
            AFEIIS    +  D       S+ M +L    G  GM+GGQ +D++   + + E  +  
Sbjct: 119 QAFEIISKKMQETDDFNILKRMSRAMYTLARATGAFGMIGGQCVDVEYSGKKMTEEVMKY 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              +KTGAL+  +   G I+A AS+ E   L+  G  +G  FQ+ DD LD   D  
Sbjct: 179 TYALKTGALLAASFVVGGILAGASETEVRLLKKAGSYVGEAFQIRDDYLDIVADEK 234


>gi|71903832|ref|YP_280635.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180]
 gi|94994734|ref|YP_602832.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           pyogenes MGAS10750]
 gi|71802927|gb|AAX72280.1| dimethylallyltransferase [Streptococcus pyogenes MGAS6180]
 gi|94548242|gb|ABF38288.1| Dimethylallyltransferase / Geranyltranstransferase [Streptococcus
           pyogenes MGAS10750]
          Length = 290

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|303237329|ref|ZP_07323899.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
 gi|302482716|gb|EFL45741.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
          Length = 324

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 18/227 (7%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           TI+++ L     +   +    L   I+Y L LGGK+IR  L+    +L+  N  T L   
Sbjct: 9   TIVNEYLNNLPYN---RKPSSLYEPIKYVLDLGGKRIRPILMMLSYNLYKENPKTILSSA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E  H Y+L+HDDL  MD   +RRG+ TVH +++   AI++G+ +L  A+E ++    
Sbjct: 66  CALETYHNYTLLHDDL--MDEAPLRRGQQTVHTKWNNNQAILSGDSMLVLAYERLAQ--- 120

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193
              D    Q +L+L     LQ +  GQ  D++ E  ++    +   + ++KT  L+  A 
Sbjct: 121 --VDTKHLQAVLNLFTETALQ-IGEGQQYDMEFEHRNDVTVDEYIEMIRLKTSVLLACAT 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GA++A AS  + E L  FGE +G+ FQL DD LD   D     KK
Sbjct: 178 KMGALLADASAEDAENLYKFGEQIGLAFQLQDDYLDVYGDSKVFGKK 224


>gi|227510476|ref|ZP_03940525.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190128|gb|EEI70195.1| geranyltranstransferase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 307

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 12/239 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L   ++E + RI+ +L+  + Q           +L  ++ Y++  GGK++R  L  
Sbjct: 4   MGTKLNEFIKEWTPRINQVLESKIEQ------DTDQQKLFESMSYSVNAGGKRLRPLLTI 57

Query: 60  ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                FN     + L+   A+E +H YSLIHDDLP+MDN  +RRGKPT H  Y    A +
Sbjct: 58  ATLITFNQTITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATL 117

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           AG+GL   AF+ +      L  + R QL L+L    G +GM  GQ  DI+ E   +   +
Sbjct: 118 AGDGLQALAFQWVVD--NDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGTRLKLHE 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + + KTGAL+ +A  +G IMA   +++K+ L  F  N G  FQ+ DD+LD   D  
Sbjct: 176 LQKLDRNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGDEK 234


>gi|241668001|ref|ZP_04755579.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876535|ref|ZP_05249245.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842556|gb|EET20970.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 293

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 123/222 (55%), Gaps = 8/222 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++  + A       + +L  A++Y+   GGK+IR+  V      FN++     ++  AIE
Sbjct: 11  NIFSEKAFSEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
           CIH YSLIHDDLP+MDN  +RRGKPT HI+++E TAI+AG+ L +  FEII++       
Sbjct: 71  CIHTYSLIHDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINTLDINDIY 130

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            ++   ++      GL+GM+GGQ   +D +++ +    + ++   KT  +   +     I
Sbjct: 131 KLKKVNIV-FAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHINKTAKMFRASIVLPYI 189

Query: 199 MAHASQNEKER-LRCFGENLGIIFQLADDLLDC---EEDLPK 236
           ++  + +E E  L    + +G+ FQ+ DD+LD     ++L K
Sbjct: 190 VSKYNNDEFEAILTKVSDLIGLCFQIKDDILDVTRSTQELGK 231


>gi|145629449|ref|ZP_01785247.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
 gi|144978292|gb|EDJ88056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
          Length = 296

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 92/238 (38%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       S     +N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIES-----YNAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15]
 gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15]
          Length = 296

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 7/218 (3%)

Query: 20  LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76
           L  +  +  S +     DR L  A+ Y++  GGK+IR  L+    + F+        +V 
Sbjct: 11  LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS    
Sbjct: 71  AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L  + +  L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  
Sbjct: 129 HLGHSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALL 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +G I+A   +     L+   E+LG+ FQ+ DDLLD   
Sbjct: 189 AGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226


>gi|332884305|gb|EGK04573.1| hypothetical protein HMPREF9456_00900 [Dysgonomonas mossii DSM
           22836]
          Length = 325

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 115/229 (50%), Gaps = 15/229 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
            D IL  +  +      +     L   I Y L LGGK++R  L     +L+  +    + 
Sbjct: 7   FDEILSIVNTEIKKIEYSSAPKSLFEPISYILSLGGKRVRPALSLMSYNLYKEDVERVIP 66

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +   IE  H ++L+HDDL  MD   +RRG PTVHI++++ TA+++G+ +L  A++ I+  
Sbjct: 67  IALGIEIFHNFTLLHDDL--MDRADMRRGNPTVHIKWNDNTAVLSGDAMLIEAYKEIAKI 124

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
                D+   + +L L        +  GQ  D++ E    +   +   + ++KT  L+  
Sbjct: 125 -----DSQYLKPVLDLFSTTAT-EICCGQQYDMEFEQRMDVTIAEYLEMIRLKTAVLLAC 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + + GAI+A AS  + E L  +G ++G+ FQL DDLLD   D     KK
Sbjct: 179 SLKEGAIVAGASAEDAENLYNYGIHVGLGFQLMDDLLDVYGDSSNFGKK 227


>gi|313669268|ref|YP_004049552.1| geranyltranstransferase [Neisseria lactamica ST-640]
 gi|313006730|emb|CBN88200.1| geranyltranstransferase [Neisseria lactamica 020-06]
          Length = 298

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA+L GGK++R  LV  
Sbjct: 4   TNDLKTWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L         +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H++Y E TA++ G
Sbjct: 59  ASELGESVADAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L T AF+++S P T+L    +  ++  L    G  GM GGQ +D+ +    + +  + 
Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMAGGQTIDLANVGRQMPQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   +  +N    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVVLGAMSCPNLPENSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|309379784|emb|CBX21560.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 298

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 129/238 (54%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA+L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H++Y E TA++ G
Sbjct: 59  ASELGEAVHEAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L T AF+++S P T+L    +  ++  L    G  GM GGQ +D+ +    + +  + 
Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGRQMPQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVVLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|253687426|ref|YP_003016616.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754004|gb|ACT12080.1| Polyprenyl synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 303

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/242 (34%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++L  + +R + +L   +           +  L++A+ Y +LLGGK++R FLV    
Sbjct: 3   DFSTQLSAHYQRTNRMLGHFIATL-----PFQSSPLVNAMEYGSLLGGKRLRPFLVYTTG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF +   +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 58  ELFGMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 117

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P  Q+ D  R  ++  L    G+ GM GGQ  D++ E   +D   +  
Sbjct: 118 LQTLAFSILADAPMPQVSDRDRLAMISELAQASGVAGMCGGQAFDLEAEGHQVDLAALER 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ +  +       L  +   +G+ FQ+ DD+LD   D     
Sbjct: 178 IHRHKTGALIRAAVRLGALASGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTG 237

Query: 236 KK 237
           K+
Sbjct: 238 KR 239


>gi|325134983|gb|EGC57614.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M13399]
 gi|325202853|gb|ADY98307.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240149]
 gi|325208846|gb|ADZ04298.1| octaprenyl-diphosphate synthase [Neisseria meningitidis NZ-05/33]
          Length = 324

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|260424661|ref|ZP_05778957.1| geranyltranstransferase [Dialister invisus DSM 15470]
 gi|260402735|gb|EEW96282.1| geranyltranstransferase [Dialister invisus DSM 15470]
          Length = 287

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/227 (35%), Positives = 132/227 (58%), Gaps = 12/227 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           +D  L+ LL+ +        +D L ++++Y+L+ GGK+IR  L      +  V+    + 
Sbjct: 8   VDDALECLLMPSDPA-----HDSLYASMQYSLMAGGKRIRPCLFLVLLDILGVDSNLYIN 62

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V  A+EC+H YSLIHDDLP MDN   RRGK   H +Y    A +AG+GLLTYAFE+++  
Sbjct: 63  VACALECVHTYSLIHDDLPGMDNDDYRRGKLANHKKYGVGIATMAGDGLLTYAFELLA-C 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
           +  +    R  L+  LT   G  GM+GGQ  D   E   +  +++  + + KTG L+C +
Sbjct: 122 ENNISFFKRIALIKILTAAAGPAGMVGGQAHDKGAEGKTLSLSELMFLDQCKTGKLICAS 181

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
            +  + +A  S+N+KE +  +G+++G++FQ+ DDLLD     +++ K
Sbjct: 182 LDMASEIAGLSKNDKEAIHTYGKHIGLLFQITDDLLDFNGVFQEMGK 228


>gi|257459231|ref|ZP_05624350.1| geranyltranstransferase [Campylobacter gracilis RM3268]
 gi|257443616|gb|EEV18740.1| geranyltranstransferase [Campylobacter gracilis RM3268]
          Length = 357

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/220 (37%), Positives = 118/220 (53%), Gaps = 7/220 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH-LTALRVGA 77
             D L Q      + H      A+ Y L  GGK  R+ L+    S  +      AL +  
Sbjct: 81  FKDYLKQNELKAPSFHP-YFEEALNYMLQAGGKHFRAQLLLGVVSTVDERRFEGALAIAM 139

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MD+  +RRG+P++H +YDEVTAI+ G+ L T AF I +S    
Sbjct: 140 ALEMIHTYSLIHDDLPAMDDADLRRGRPSLHKKYDEVTAILVGDALNTDAFLIAASAN-- 197

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
           L D I+ + + +L  N G  GM+ GQ +D + E   + ++++  +   KTGAL+  A E 
Sbjct: 198 LSDEIKIKCIKTLARNAGSGGMVLGQAIDCRFENSPLKQSELEFLHLHKTGALIAAAFEL 257

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAI+          L   G  LG+IFQ+ DD++D   D  
Sbjct: 258 GAIIGGLKDELAHELYKIGLKLGLIFQIEDDIIDATGDEA 297


>gi|254475222|ref|ZP_05088608.1| decaprenyl diphosphate synthase [Ruegeria sp. R11]
 gi|214029465|gb|EEB70300.1| decaprenyl diphosphate synthase [Ruegeria sp. R11]
          Length = 406

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L E    ++T++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 87  LAATLSEEMAAVNTLI-------RTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 139

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +    +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 140 LCGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 197

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +F+++    +     +R   +L+       +G +  QM    D   DE     + + 
Sbjct: 198 FARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAASDLATDEDIYLQVVRG 251

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT AL   A ++G ++A AS+ E + L  +G+ LGI FQ+ADDLLD + D
Sbjct: 252 KTAALFSAATQAGGVIAEASEAEVDALYAYGDALGIAFQIADDLLDYQGD 301


>gi|312132100|ref|YP_003999440.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908646|gb|ADQ19087.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
          Length = 319

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/229 (32%), Positives = 120/229 (52%), Gaps = 16/229 (6%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           + +R  + L+    +       +H   L   I Y L LGGK+IR  L    A+LF  +  
Sbjct: 2   SLERFSSSLERAFEEQVF---GEHPAELYEPIHYILSLGGKRIRPLLTLLSANLFTKSWE 58

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           TA+    ++E  H ++L+HDD+  MD   +RRGKPTVH ++D   AI++G+ +L  A+E+
Sbjct: 59  TAIEPAMSVEVFHNFTLMHDDI--MDQAPLRRGKPTVHHKWDTNRAILSGDVMLVEAYEL 116

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGA 187
           +S  +  L      +       N     +  GQ LD+   + E + + +   + ++KT  
Sbjct: 117 LSKLEASLLKKAILRF------NKVAAEVCEGQQLDMLFAEREEVSKEEYLEMIRLKTSV 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+ ++ E G I+A AS +  E L   GENLG+ FQ+ DD+LD   D PK
Sbjct: 171 LVGYSMELGGIVAGASPDACELLYEVGENLGLGFQMTDDILDVYAD-PK 218


>gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
 gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
          Length = 293

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 11/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
                +   +R++  L+  L       ++    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWTRGVLERVEAALEHYLP-----AESTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF  ++S    L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVSLTSD--VLAPAQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRAQLETMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+   A      R L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 RMKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230


>gi|209551400|ref|YP_002283317.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537156|gb|ACI57091.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 304

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 118/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N++ I+ +LD LLL  A   +    + L SA+ YA+L GGK++R FLV E 
Sbjct: 6   DTFETRLKNNAREIEALLDALLLPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVES 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   A RVGAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+
Sbjct: 66  AALLGGDDEAARRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLTYAF+II++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  
Sbjct: 126 SLLTYAFDIIAAPETALADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GA++A +   ++ RLR FGE +G+ FQLADD+LD   D  
Sbjct: 186 LQAMKTGALIRFACEAGALIAASPPEDRRRLRAFGEKIGLAFQLADDILDLTSDTA 241


>gi|294671407|ref|ZP_06736256.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291306884|gb|EFE48127.1| hypothetical protein NEIELOOT_03114 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 353

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 113/229 (49%), Gaps = 15/229 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L  +  R+D +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 37  FQQNLAADLGRVDVVINRAV-QSEVALISQIGTYIISA------GGKRLRPVITILSGRA 89

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              ++     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 90  LGCDNDGLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 147

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     ++   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 148 TRAFQLMVGSGS-----MKILEVMADATNIIAEGEVM-QLMNIGNIDITEAQYLQVIQYK 201

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   A + GAI+A AS  ++  LR +G  +G  FQ+ DD+LD   D
Sbjct: 202 TAKLFEAAAQVGAILAGASAEQEAALRDYGMYVGTAFQIIDDVLDYSGD 250


>gi|317503704|ref|ZP_07961721.1| geranyltranstransferase [Prevotella salivae DSM 15606]
 gi|315665225|gb|EFV04875.1| geranyltranstransferase [Prevotella salivae DSM 15606]
          Length = 323

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 19/228 (8%)

Query: 21  DDLLLQTASHMQTQHNDR----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D+LL++    +     DR    L   ++Y L +GGK+IR  L+     LF  +  + L  
Sbjct: 4   DELLVKVNDFLSKLRYDRKPSGLYDPVKYVLSMGGKRIRPVLMLLAYGLFKDDVESILMP 63

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E  H Y+L+HDDL  MDN  +RRG  TVH +++  TAI++G+ +L  A+E I+   
Sbjct: 64  ACGLETYHNYTLLHDDL--MDNAEMRRGHETVHRKWNANTAILSGDSMLVLAYERIAQCS 121

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
                ++        T       +  GQ  D+  E    + E +   + ++KT  L+  A
Sbjct: 122 QIYLSDVL------HTFTETALEIGEGQQYDMDFETRNDVTEAEYIEMIRLKTSVLLACA 175

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            + GAI+A AS+ +++ L  FGE +G+ FQL DD LD   D     KK
Sbjct: 176 LKIGAILAGASKQDQDYLYKFGEQIGLAFQLQDDYLDVYGDPKVFGKK 223


>gi|301170227|emb|CBW29831.1| geranyltranstransferase [Haemophilus influenzae 10810]
          Length = 296

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     Q  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDQRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 294

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 295

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|329765808|ref|ZP_08257374.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137651|gb|EGG41921.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 326

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 13/235 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASL 64
              +++N+K ++  L+  L          +   L  A  +  + GGK++R ++V +   +
Sbjct: 4   EKSIEKNAKIVNKYLNSKL--------KGNPKSLYDAASHLIVHGGKRLRPYMVIKSCQI 55

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              N  TA+   +A+E IH ++L+HDD+  MDN  +R G PTVH ++    AI+AG+ L 
Sbjct: 56  LGGNTATAMPAASAVEMIHNFTLVHDDI--MDNDEMRHGVPTVHKKFGMPIAILAGDVLF 113

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + A++IIS         ++    L+       +G L    +        + +   +   K
Sbjct: 114 SKAYQIISESNISKDSTVQLVSRLAKACVDVCEGQLLDVKMAEGKRIPTQKEYIAMIGKK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           T AL   +C  GAI A  +Q +   L  FG+NLGI FQ+ DDL+    D    KK
Sbjct: 174 TAALFDVSCSMGAICATNNQKDILNLSNFGKNLGIAFQITDDLIGVMGDSKITKK 228


>gi|298292712|ref|YP_003694651.1| polyprenyl synthetase [Starkeya novella DSM 506]
 gi|296929223|gb|ADH90032.1| Polyprenyl synthetase [Starkeya novella DSM 506]
          Length = 305

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 101/207 (48%), Positives = 137/207 (66%), Gaps = 10/207 (4%)

Query: 37  DRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           +RL SA+R+ AL GGK++R FLV E A+LF V    A+   AA+ECIHCYSL+HDDLP+M
Sbjct: 34  ERLASAMRHGALAGGKRLRPFLVIESAALFGVPAAAAMPAAAALECIHCYSLVHDDLPAM 93

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+PTVH  YDE TAI+AG+GLLT AFEI++  +      +R  L+ SL H  G
Sbjct: 94  DNDDLRRGQPTVHRAYDEATAILAGDGLLTLAFEILAREEAGPDAEVRIALVASLAHAAG 153

Query: 156 LQGMLGGQMLDIQDEF---------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           + GM+GGQMLD+  E          +   ++  +Q MKTGAL+  ACE+GA++  A+  E
Sbjct: 154 VAGMIGGQMLDLAAEGRFASGRPLDLPAEEIIRLQAMKTGALLRQACEAGALVGRATPEE 213

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
           +  L  +   +G  FQ+ADDLLD E +
Sbjct: 214 RASLDRYARAVGRAFQIADDLLDVEGE 240


>gi|254805638|ref|YP_003083859.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14]
 gi|254669180|emb|CBA07918.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha14]
 gi|325145122|gb|EGC67404.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240013]
 gi|325205404|gb|ADZ00857.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M04-240196]
          Length = 324

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|126666697|ref|ZP_01737674.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
 gi|126628742|gb|EAZ99362.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
          Length = 322

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 118/227 (51%), Gaps = 12/227 (5%)

Query: 13  SKRI-DTILDDLLLQTASHMQTQHNDR--LLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           ++RI DT+ DD        +Q   +D   +    +Y +  GGK++R  LV   +     N
Sbjct: 3   AQRIYDTVADDFSRVNELIIQRLSSDVPMVEKIAQYIIESGGKRLRPLLVLLASRATGYN 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L++ A IE +H  +L+HDD+  +D   +RRG+ T + ++    +++ G+ L   AF
Sbjct: 63  EDNHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++   ++     +    +LS    +  +G +  Q++++++  + E Q   +   KT  L
Sbjct: 121 EMMVELES-----LPIMKVLSHATAVIAEGEVM-QLMNVKNPDLTENQYMQVIHNKTAML 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              +  SGA++A A+  ++E L+ +G++LG+ FQL DD+LD   D  
Sbjct: 175 FEASSHSGALLAGANHAQEEALKNYGKHLGLAFQLVDDVLDYRGDAE 221


>gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980]
 gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980]
          Length = 296

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 7/218 (3%)

Query: 20  LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76
           L  +  +  S +     DR L  A+ Y++  GGK+IR  L+    + F+        +V 
Sbjct: 11  LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS    
Sbjct: 71  AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L  + +  L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  
Sbjct: 129 HLGHSPKLLLLQQLAVCAGAQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALL 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +G I+A   +     L+   E+LG+ FQ+ DDLLD   
Sbjct: 189 AGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226


>gi|291514401|emb|CBK63611.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301]
          Length = 323

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 17/225 (7%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
           + +++ L QT    +    + L + I Y+L  GGK++R  L+T    +F+ +   AL   
Sbjct: 9   SAIENYLAQTEFPAE---PELLYAPIGYSLAGGGKRLRPMLLTLSCGIFSDDVKQALPAA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E  H ++L+HDD+  MDN  +RRGKP+VH ++ +  AI++G+ ++ YA+ ++SS   
Sbjct: 66  AAVEVFHNFTLLHDDI--MDNAAVRRGKPSVHAKWGQNVAILSGDAMMIYAYRLLSSVPA 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
            L   + S      T N     +  GQ  D+  E    +   +   + ++KT  L+  + 
Sbjct: 124 NLLPQVLS------TFNTMALEVCEGQQYDMDFEQKPKVSVVEYMHMIELKTSVLLAGSV 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
             GA++  AS  +  RLR F   LG+ FQL DDLLD   D  L K
Sbjct: 178 VIGAMLGGASDEDCRRLRRFAVELGLAFQLQDDLLDSYGDQRLGK 222


>gi|290580921|ref|YP_003485313.1| putative farnesyl diphosphate synthase [Streptococcus mutans
           NN2025]
 gi|254997820|dbj|BAH88421.1| putative farnesyl diphosphate synthase [Streptococcus mutans
           NN2025]
          Length = 289

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/235 (35%), Positives = 130/235 (55%), Gaps = 15/235 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN- 66
           +++  K I+  +         + QT  +  L+ A+ Y++  GGK+IR  L+ E    F  
Sbjct: 1   MKDKIKYINQAIKHY------YAQTHVSQDLVEAVLYSVAAGGKRIRPLLLLEILQGFGL 54

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V      +V A++E IH  SL+HDDLP+MDN   RRG+ T H ++ E TAI+AG+ L   
Sbjct: 55  VLTEAHYQVAASLEMIHTGSLVHDDLPAMDNDDYRRGQLTNHKKFGETTAILAGDSLFLD 114

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
            F +++  K  L+ +I+ +L+  L+   G  GM+GGQMLDI+ E   ++  Q+  I   K
Sbjct: 115 PFGLLA--KADLRADIKIKLVAELSDAAGSYGMVGGQMLDIKGEHVQLNLDQLAQIHANK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           TG L+ F   +  I+A  S+    RLR  GE +G+ FQ+ DD+LD      +L K
Sbjct: 173 TGKLLTFPFVAAGIIAELSEKALARLRQVGELVGLAFQVRDDILDVTASFSELGK 227


>gi|145636150|ref|ZP_01791820.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittHH]
 gi|145270672|gb|EDK10605.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittHH]
          Length = 296

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 92/238 (38%), Positives = 132/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       S      N  LL A++YALL GGK++R FLV   
Sbjct: 2   GNFSEELQQVQTRINRFLEAQFEGIESR-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|325267227|ref|ZP_08133890.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
 gi|324981288|gb|EGC16937.1| geranyltranstransferase [Kingella denitrificans ATCC 33394]
          Length = 295

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 6/231 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           LQ   KR+     +++LQ      +Q    L  A+RY AL GGK++R  LV   + L + 
Sbjct: 4   LQLWQKRV-AAQTEIILQQKLPQISQEPVVLHEAMRYSALDGGKRLRPLLVWAASQLGDS 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+ECIH YSL+HDD+P MDN  +RRGKPT H+Q+ +  A++ G+ L T A
Sbjct: 63  VQAACEAAMAAVECIHVYSLVHDDMPEMDNDQLRRGKPTCHVQFGDAVALLTGDALQTLA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKT 185
           F+I+S+  T+L    + +++  L    G  GM GGQ +D+ +   D  Q  +  +  +KT
Sbjct: 123 FDILSAA-TELPAERQLKMVQVLAKASGSLGMAGGQAIDLANVGKDMKQPALEQMHGLKT 181

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A + G +     + ++  RL  +   LG+ FQ+ DD+LDCE D  
Sbjct: 182 GALIRAAVQLGGLSCPQITADQLARLDAYAAKLGLAFQVIDDVLDCEADTA 232


>gi|146310549|ref|YP_001175623.1| geranyltranstransferase [Enterobacter sp. 638]
 gi|145317425|gb|ABP59572.1| farnesyl-diphosphate synthase [Enterobacter sp. 638]
          Length = 299

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 135/242 (55%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++LQ   +R +  L   +       Q   N  L++A+ Y ALLGGK++R FLV    
Sbjct: 2   DFSTELQACVERANDALRRFI-----EPQPFQNTPLVAAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F ++  T     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 57  NMFGISSNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ LD++ E   ++  Q+  
Sbjct: 117 LQTLAFSILSDAPMIEVADRDRLAMVSELAMASGVAGMCGGQALDLEAEGHQVNLEQLER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A          L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGSKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|260431561|ref|ZP_05785532.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415389|gb|EEX08648.1| octaprenyl-diphosphate synthase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 332

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 10/237 (4%)

Query: 1   MNGGLPSKLQEN-SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
           M+ G  SK  E  ++ +   +D +     + M ++H  R+     + +  GGK++R  L 
Sbjct: 1   MDIGTISKPHERLAELLAGEMDAVNTLIRTRMASEHAPRIPEVTAHLVEAGGKRLRPMLT 60

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A LF       +R+ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++
Sbjct: 61  LAAARLFGYGGDHHIRLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVL 118

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ L + +F+++    +     +R   +L+       +G +  QM    D   DE    
Sbjct: 119 VGDYLFSRSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAATDLRTDEAVYL 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + + KT AL   A E G ++A AS+ +   L  +G+ LGI FQ+ADDLLD + D  
Sbjct: 173 QVVRGKTAALFSAATEVGGVIAGASEEQVRALFAYGDALGIAFQIADDLLDYQGDSK 229


>gi|118475576|ref|YP_891278.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414802|gb|ABK83222.1| geranyltranstransferase [Campylobacter fetus subsp. fetus 82-40]
          Length = 277

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 8/218 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIE 80
           +L L          ND L   ++    GGK  R+ L+         +  +A   V AA+E
Sbjct: 8   ELNLPKVDSFHPHFNDSLSWVLK---AGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVE 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H YSLIHDDLP MDN  +RRG  T+H++YDEV+A++AG+ L T+AF ++SS    L  
Sbjct: 65  MLHTYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHAFYMLSSAN--LPA 122

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198
               + + +L  N G+ GM+ GQ +D   +++ ++  ++  +   KTGAL+  + + GAI
Sbjct: 123 EAVVKCVQTLAENGGIYGMVIGQAIDCYFENKHLNLDELKFLHLHKTGALIAASMKMGAI 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++  S  + E++   G  LG+ FQ+ DD++D   D  K
Sbjct: 183 ISAQSDKQCEKIYNIGLKLGLAFQIHDDIIDATSDEMK 220


>gi|22124916|ref|NP_668339.1| geranyltranstransferase [Yersinia pestis KIM 10]
 gi|45440604|ref|NP_992143.1| geranyltranstransferase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108808661|ref|YP_652577.1| geranyltranstransferase [Yersinia pestis Antiqua]
 gi|108811077|ref|YP_646844.1| geranyltranstransferase [Yersinia pestis Nepal516]
 gi|145600070|ref|YP_001164146.1| geranyltranstransferase [Yersinia pestis Pestoides F]
 gi|149364978|ref|ZP_01887013.1| geranyltranstransferase [Yersinia pestis CA88-4125]
 gi|162421705|ref|YP_001607439.1| geranyltranstransferase [Yersinia pestis Angola]
 gi|165926609|ref|ZP_02222441.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165935882|ref|ZP_02224452.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011123|ref|ZP_02232021.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213125|ref|ZP_02239160.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398812|ref|ZP_02304336.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421520|ref|ZP_02313273.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423513|ref|ZP_02315266.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470229|ref|ZP_02334933.1| geranyltranstransferase [Yersinia pestis FV-1]
 gi|218930206|ref|YP_002348081.1| geranyltranstransferase [Yersinia pestis CO92]
 gi|229838781|ref|ZP_04458940.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896065|ref|ZP_04511235.1| geranyltranstransferase [Yersinia pestis Pestoides A]
 gi|229899349|ref|ZP_04514492.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901304|ref|ZP_04516426.1| geranyltranstransferase [Yersinia pestis Nepal516]
 gi|270489496|ref|ZP_06206570.1| polyprenyl synthetase [Yersinia pestis KIM D27]
 gi|294504904|ref|YP_003568966.1| geranyltranstransferase [Yersinia pestis Z176003]
 gi|21957753|gb|AAM84590.1|AE013704_7 geranyltranstransferase [Yersinia pestis KIM 10]
 gi|45435461|gb|AAS61020.1| geranyltranstransferase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774725|gb|ABG17244.1| farnesyl-diphosphate synthase [Yersinia pestis Nepal516]
 gi|108780574|gb|ABG14632.1| farnesyl-diphosphate synthase [Yersinia pestis Antiqua]
 gi|115348817|emb|CAL21771.1| geranyltranstransferase [Yersinia pestis CO92]
 gi|145211766|gb|ABP41173.1| farnesyl-diphosphate synthase [Yersinia pestis Pestoides F]
 gi|149291391|gb|EDM41465.1| geranyltranstransferase [Yersinia pestis CA88-4125]
 gi|162354520|gb|ABX88468.1| geranyltranstransferase [Yersinia pestis Angola]
 gi|165916027|gb|EDR34634.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921537|gb|EDR38734.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990123|gb|EDR42424.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205912|gb|EDR50392.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960439|gb|EDR56460.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051316|gb|EDR62724.1| geranyltranstransferase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057683|gb|EDR67429.1| geranyltranstransferase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229681233|gb|EEO77327.1| geranyltranstransferase [Yersinia pestis Nepal516]
 gi|229687751|gb|EEO79824.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695147|gb|EEO85194.1| geranyltranstransferase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700988|gb|EEO89017.1| geranyltranstransferase [Yersinia pestis Pestoides A]
 gi|262362970|gb|ACY59691.1| geranyltranstransferase [Yersinia pestis D106004]
 gi|262366890|gb|ACY63447.1| geranyltranstransferase [Yersinia pestis D182038]
 gi|270338000|gb|EFA48777.1| polyprenyl synthetase [Yersinia pestis KIM D27]
 gi|294355363|gb|ADE65704.1| geranyltranstransferase [Yersinia pestis Z176003]
 gi|320016363|gb|ADV99934.1| geranyltranstransferase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 306

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +R++  L D +           N  L+ A+RY A++GGK++R +LV    
Sbjct: 9   DFKQQLAAHQQRVNQALLDFIAPL-----PFGNSNLIEAMRYGAVIGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++        AAIECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILAGDA 123

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
           L T AF I++  P   + D  R  +++ L    G  GM  GQ LD++ E        +  
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGDLEQ 183

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA  A  A +     L  + E +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGAQAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|320103326|ref|YP_004178917.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644]
 gi|319750608|gb|ADV62368.1| farnesyl-diphosphate synthase [Isosphaera pallida ATCC 43644]
          Length = 336

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 89/236 (37%), Positives = 121/236 (51%), Gaps = 15/236 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHN-----DRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
           +RI+T LD LL     H            RL  A RY+ L GGK +R  L    A     
Sbjct: 41  QRIETALDALLPPVEEHPNAAGPYGVCPARLARAARYSTLGGGKLLRPKLTLLAAEAVGG 100

Query: 68  NH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +     AL    A+E +H YSL+HDDLP+MD+  +RRG+PT H+++DE TAI+AG+GLLT
Sbjct: 101 DDAIENALAAACAVELVHAYSLVHDDLPAMDDDDLRRGRPTTHVEFDEATAILAGDGLLT 160

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFMI 180
            AF  + +          +  +  L    G +GM+GGQM D+Q E I   Q     +  I
Sbjct: 161 LAFGAVVA--GVRPAERAAACVGILAEAAGFRGMVGGQMADLQAESIPREQGSVELLEAI 218

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTGAL+  +   GA  + A+      L  +G  LG+ FQ+ DDLLD   D  K
Sbjct: 219 HLRKTGALLRASLTMGAAASGANAELTTALDEYGRALGLAFQIQDDLLDATGDPAK 274


>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
 gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
          Length = 311

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 9/235 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 ++    R++  L   +   A          L  A+RYA+L GGK++R  LV   
Sbjct: 20  FDFNDWMRAELARVEEALSRWVCHDA-------PAGLGEAMRYAVLDGGKRLRPLLVLAA 72

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +         ALR   A+E IH YSL+HDD+P MDN  +RRGKPTVH+++ E  A++AG+
Sbjct: 73  SHAVGGQPEAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVRFGEARALLAGD 132

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
            L   AFE+++      L    R    L+               L      + E Q+  +
Sbjct: 133 ALQALAFELLTPEDGVPLAMQARLCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHM 192

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +KTGAL+  +   GA+    +    + L  +G  +G+ FQ+ DD+LD  +D  
Sbjct: 193 HSLKTGALLQASVVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSA 247


>gi|332796336|ref|YP_004457836.1| farnesyltranstransferase [Acidianus hospitalis W1]
 gi|332694071|gb|AEE93538.1| farnesyltranstransferase [Acidianus hospitalis W1]
          Length = 326

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 9/229 (3%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  K  D I+ ++  +   +++ +    L  A  Y L  GGK++R  +    + LF+ + 
Sbjct: 2   ELDKYFDEIIKNVNEEIEKYIKGE-PKELYDASIYLLKAGGKRLRPLITVASSDLFSGDR 60

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A +  AA+E +H ++LIHDD+  MD   +RRG PTVH+++    AI+AG+ L   AFE
Sbjct: 61  KRAYKAAAAVEILHNFTLIHDDI--MDEDTLRRGMPTVHVKWGVPMAILAGDLLHAKAFE 118

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTG 186
           ++S     L        +   + ++ +  +  GQ +D++ E    + E +   + K KT 
Sbjct: 119 VLSEALEGLDSKRFYMGLSEFSKSVII--IAEGQAMDMEFENRQDVTEEEYLEMIKKKTA 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L   +   G +++ A   + E L+ FG NLGI FQ+ DD+L    D  
Sbjct: 177 QLFSCSAFLGGLVSGAEDKDLELLKEFGLNLGIAFQIIDDILGLTADEK 225


>gi|260583060|ref|ZP_05850842.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           NT127]
 gi|260093911|gb|EEW77817.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           NT127]
          Length = 296

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GNFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|86134740|ref|ZP_01053322.1| polyprenyl synthetase [Polaribacter sp. MED152]
 gi|85821603|gb|EAQ42750.1| polyprenyl synthetase [Polaribacter sp. MED152]
          Length = 323

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 12/217 (5%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++ L    S    Q    L   + Y L LGGK+IR  L    A +F  ++  AL    A+
Sbjct: 8   EEFLSYLESKDWVQEPKNLYEPVDYILKLGGKRIRPVLTLMAADIFGADYNKALPAALAV 67

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H ++L+HDD+  MD+  +RRGK TVH ++D  TAI++G+ +L  A++   + K ++ 
Sbjct: 68  EVFHNFTLVHDDI--MDDAPLRRGKATVHEKWDINTAILSGDAMLILAYKYFENYKPEVF 125

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESG 196
                   L+   +     +  GQ LD+  E    +   +   +  +KT  L+  A + G
Sbjct: 126 QK------LAKLFSKTALEVCDGQQLDVDFETRKKVTIDEYLNMICLKTSVLVAAALKMG 179

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AI+A +     + +  FG NLG+ FQL DD LD   D
Sbjct: 180 AIVAESDDKNADLIYDFGLNLGLAFQLQDDYLDTFGD 216


>gi|15897028|ref|NP_341633.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
           solfataricus P2]
 gi|284173372|ref|ZP_06387341.1| geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
           solfataricus 98/2]
 gi|14423727|sp|P95999|GGPS_SULSO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase
 gi|13813193|gb|AAK40423.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [Sulfolobus
           solfataricus P2]
 gi|261601682|gb|ACX91285.1| Dimethylallyltranstransferase [Sulfolobus solfataricus 98/2]
          Length = 332

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 14/237 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L     E    ++  + + +      ++        ++      GGK++R  ++   
Sbjct: 3   SDDLSLYFNEIVNNVNFRIKNFVKSNFKTLEE-------ASFHLFTAGGKRLRPLVLVSS 55

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + L   +   A +  AA+E +H ++L+HDD+  MDN  +RRG PTVH+++ E  AI+AG+
Sbjct: 56  SDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVHVKWGEPMAILAGD 113

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            L   AFE ++     L  N   +       +I +  +  GQ +D+  E    + E +  
Sbjct: 114 YLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEI--ISEGQAMDMSFENRLDVTEEEYI 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + K KT  L   +   G I+  A+ +  ++L  +G NLGI FQ+ DD+L    D  
Sbjct: 172 QMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEK 228


>gi|303243472|ref|ZP_07329814.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1]
 gi|302486033|gb|EFL48955.1| Dimethylallyltranstransferase [Methanothermococcus okinawensis IH1]
          Length = 319

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/231 (33%), Positives = 116/231 (50%), Gaps = 20/231 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E   +ID  L+  + +         ++ L +A ++ L  GGK+IR +L T    L   N
Sbjct: 6   KELLSKIDNELNKYVEK---------DNTLYNASKHLLFAGGKRIRPYLATLTYMLKKDN 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L    A+E IH Y+LIHDD+  MDN   RRG+ TVH++Y E  AI+AG+ L   AF
Sbjct: 57  LDEILPPAVAVELIHNYTLIHDDI--MDNDDERRGRTTVHVEYGEPIAILAGDLLYAKAF 114

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKT 185
           E IS+ K   K +   +       +     +  GQ +D++ E  D       F +   KT
Sbjct: 115 EAISNIKDPKKAHEVLK-----ALSKACVEVCEGQAMDMEFEDRDKISLDDYFEMISKKT 169

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GAL+    E GAIMA  +  E+  L  + + +G+ FQ+ DD+LD   D  K
Sbjct: 170 GALIIAPIEIGAIMAECTDEERNALYEYAKRIGMTFQIQDDVLDLIGDNKK 220


>gi|1707833|emb|CAA69541.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus solfataricus
           P2]
          Length = 332

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 14/237 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L     E    ++  + + +      ++        ++      GGK++R  ++   
Sbjct: 3   SDDLSLYFNEIVNNVNFRIKNFVKSNFKTLEE-------ASFHLFTAGGKRLRPLVLVSS 55

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + L   +   A +  AA+E +H ++L+HDD+  MDN  +RRG PTVH+++ E  AI+AG+
Sbjct: 56  SDLIGGDRERAYKAAAAVEILHNFTLVHDDI--MDNDGLRRGLPTVHVKWGEPMAILAGD 113

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            L   AFE ++     L  N   +       +I +  +  GQ +D+  E    + E +  
Sbjct: 114 YLHAKAFESLNESLKGLDGNTFYKAFSIFITSIEI--ISEGQAMDMSFENRLDVTEEEYI 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + K KT  L   +   G I+  A+ +  ++L  +G NLGI FQ+ DD+L    D  
Sbjct: 172 QMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEK 228


>gi|281421201|ref|ZP_06252200.1| polyprenyl synthetase [Prevotella copri DSM 18205]
 gi|281404736|gb|EFB35416.1| polyprenyl synthetase [Prevotella copri DSM 18205]
          Length = 324

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/223 (34%), Positives = 114/223 (51%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D IL  +    A+    +    L   IRY L +GGK+IR  L+    +LF  N    L  
Sbjct: 5   DEILSMVNEFLANLPYERKPKSLYEPIRYVLSMGGKRIRPTLMLLGYNLFKDNPEKILMN 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H Y+L+HDDL  MDN  +RRG  TVH ++D  TAI++G+ +L  A+E ++   
Sbjct: 65  AVALETYHNYTLLHDDL--MDNADLRRGHETVHKKWDANTAILSGDSMLVLAYERMAQCD 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192
            +    +  +L  +    IG      GQ  D++ E  +   E +   + ++KT  L+  A
Sbjct: 123 EKHLAKVL-KLFTTTALEIG-----EGQQFDMEFENRNDVKEEEYIEMIRLKTSVLLACA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + GAI+A AS  + E L  FGE +G+ FQL DD LD   D  
Sbjct: 177 LKMGAILADASDEDAENLYKFGEQIGLAFQLQDDYLDVYGDTK 219


>gi|282881608|ref|ZP_06290277.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
 gi|281304594|gb|EFA96685.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
          Length = 324

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 15/227 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  K I+  L+ L          +    L   I Y L LGGK+IR  L+    +L+  + 
Sbjct: 6   EMLKLINEQLERL-------SDNREPRHLYEPIEYVLSLGGKRIRPILMMLAYNLYQEHP 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L    AIE  H Y+L+HDDL  MD   +RRG  TVH ++D  TAI++G+ +L  A++
Sbjct: 59  EEILMPACAIETYHNYTLLHDDL--MDCADLRRGCATVHKRWDANTAILSGDSMLVLAYQ 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGAL 188
            +++ +      +    +   T      G      +D +  + + E +   + ++KT  L
Sbjct: 117 RMATCRADYLKEV----IDLFTQTALEIGEGQQYDMDFEKRDDVTEDEYIEMIRLKTSVL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  A + GAI+  ASQ + E L  FGE +G+ FQL DD LD   D  
Sbjct: 173 LACALKIGAILGGASQEDAENLYRFGEKIGLAFQLQDDYLDVYGDTK 219


>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
           51196]
 gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
           51196]
          Length = 300

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 12/233 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+   +  D  L+ LL              +  AIR++   GGK++R  L  E A     
Sbjct: 11  LRAGVEATDAALERLLP-----APDAVPSSIHRAIRHSTFAGGKRLRPVLAMEAARTLRR 65

Query: 68  N---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +         +GAAIE +H YSLIHDDLP++DN  +RRGKPT H+ + E  AI+AG+ L 
Sbjct: 66  DRALPAGVEDLGAAIEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVFGEAIAILAGDALQ 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQK 182
           T A++ ++  +      +    +++      ++GM+GGQ+LD++ E        V  I +
Sbjct: 126 TLAYQTLAQLRCPAPATVEIIRLIAEATGT-VEGMIGGQVLDLEGEGTRPTAESVDAIHR 184

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KTGAL+  +  +G + A A+  + ERL  FG   G+ FQ+ DD+LD  +D  
Sbjct: 185 AKTGALIRVSIVTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQDSA 237


>gi|328472529|gb|EGF43392.1| geranyltranstransferase [Vibrio parahaemolyticus 10329]
          Length = 294

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/240 (35%), Positives = 128/240 (53%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  + N+++++  L+ L               L+ A++Y  LLGGK++R FLV 
Sbjct: 1   MQQTLTSFQERNNQQLNLWLEQL---------PYQEQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF II+    +   +N R  ++ +L H+ G  GM  GQ LD   ++  +   +
Sbjct: 112 GDALQTLAFTIIADGTLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAE 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 MEEIHRKKTGALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231


>gi|70605942|ref|YP_254812.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
           DSM 639]
 gi|729570|sp|P39464|GGPS_SULAC RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPS; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase
 gi|506371|dbj|BAA43200.1| geranylgeranyl diphosphate synthase [Sulfolobus acidocaldarius]
 gi|68566590|gb|AAY79519.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus acidocaldarius
           DSM 639]
          Length = 330

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 16/235 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
             +   E    ++ I+   +        +    +L  A  +    GGK++R  ++T  + 
Sbjct: 4   FDNYFNEIVNSVNDIIKSYI--------SGDVPKLYEASYHLFTSGGKRLRPLILTISSD 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF      A   GAAIE +H ++L+HDD+  MD   IRRG PTVH++Y    AI+AG+ L
Sbjct: 56  LFGGQRERAYYAGAAIEVLHTFTLVHDDI--MDQDNIRRGLPTVHVKYGLPLAILAGDLL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
              AF++++     L      +     T +I +  +  GQ +D++ E    I E +   +
Sbjct: 114 HAKAFQLLTQALRGLPSETIIKAFDIFTRSIII--ISEGQAVDMEFEDRIDIKEQEYLDM 171

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KT AL   +   GA++A A+ N+   +  FG NLGI FQ+ DD+L    D  
Sbjct: 172 ISRKTAALFSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEK 226


>gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 295

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  LD L       +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHPTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|225024258|ref|ZP_03713450.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC
           23834]
 gi|224943283|gb|EEG24492.1| hypothetical protein EIKCOROL_01131 [Eikenella corrodens ATCC
           23834]
          Length = 339

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 110/229 (48%), Gaps = 17/229 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
               L  +  R++ +++  +    + +            RY +  GGK++R  L      
Sbjct: 23  FQQHLPRDLSRVNAVIERAVQSEVALISQIG--------RYIISAGGKRLRPVLTILSGK 74

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L
Sbjct: 75  VLGYDEDPLYALAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNMFGNAAAVLVGDFL 132

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T AF+++ S  +     ++   +++   NI  +G +  Q+++I +  I E +   + + 
Sbjct: 133 YTRAFQLMVSSGS-----LKILDVMADATNIIAEGEVL-QLMNIGNTNITEAEYVQVIQY 186

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   A + GAI+A A+  ++  L+ +G ++G  FQ+ DD+LD   
Sbjct: 187 KTAKLFEAAAQVGAILAGATPEQENALKDYGRHIGTAFQIIDDVLDYSG 235


>gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1]
 gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
          Length = 295

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 83/239 (34%), Positives = 132/239 (55%), Gaps = 13/239 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +       R+DT L+ L +       T+  +RL +A+RY+++ GGK++R  L        
Sbjct: 4   TYQASCQARVDTALEPLFI-----APTKELERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL +
Sbjct: 59  GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118

Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
            AF  +  P  +   DNIR  ++ +L    G  GM+GGQ +D+      +D+  +  + +
Sbjct: 119 LAFSALLDPHLSPQADNIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHR 178

Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KTGAL+  +   GA+  A A Q + + L+ + + +G+ FQ+ DD+LD E D   L K+
Sbjct: 179 HKTGALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237


>gi|296101542|ref|YP_003611688.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056001|gb|ADF60739.1| geranyltranstransferase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 299

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 135/242 (55%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++LQ    R +  L   +       Q   N  L+ A+ Y ALLGGK++R FLV    
Sbjct: 2   DFANELQARVIRANDALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F ++  T     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 57  NMFGISDTTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S  P  ++ D  R  ++  L    G+ GM GGQ LD++ E   ++  Q+  
Sbjct: 117 LQTLAFSILSDAPMAEVSDRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVNLEQLER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGVQGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|227513485|ref|ZP_03943534.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577]
 gi|227524627|ref|ZP_03954676.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290]
 gi|227083358|gb|EEI18670.1| geranyltranstransferase [Lactobacillus buchneri ATCC 11577]
 gi|227088111|gb|EEI23423.1| geranyltranstransferase [Lactobacillus hilgardii ATCC 8290]
          Length = 307

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 12/239 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L   ++E + RI+ +L+  + Q           +L  ++ Y++  GGK++R  L  
Sbjct: 4   MGTKLNEFIKEWTPRINQVLESKIEQ------DTDQQKLFESMSYSVNAGGKRLRPLLTI 57

Query: 60  ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                FN     + L+   A+E +H YSLIHDDLP+MDN  +RRGKPT H  Y    A +
Sbjct: 58  ATLITFNQAITDSILKATCALELLHSYSLIHDDLPAMDNDGLRRGKPTNHTIYGAGMATL 117

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           AG+GL   AF+ +      L  + R QL L+L    G +GM  GQ  DI+ E   +   +
Sbjct: 118 AGDGLQALAFQWVVD--NDLTADTRCQLALALAKAAGPRGMASGQADDIEFEGTRLKLHE 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + + KTGAL+ +A  +G IMA   +++K+ L  F  N G  FQ+ DD+LD   D  
Sbjct: 176 LQKLDRNKTGALISYAVNAGLIMAQVPKDQKKDLLAFANNFGAAFQIYDDILDIVGDEK 234


>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 295

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  LD L       +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
 gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
          Length = 289

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 117/212 (55%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLP 93
           +  L+ AI Y++  GGK++R  +  E    F V        V AA+E IH  SLIHDDLP
Sbjct: 22  SPDLIEAILYSVDGGGKRVRPLIFLELLEGFGVALTDAHYDVAAALEMIHTGSLIHDDLP 81

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H +++E TAI+AG+ L    ++++++   +L   ++  L+  L H 
Sbjct: 82  AMDNDDYRRGRLTNHKKFNEATAILAGDSLFLDPYDLVANA--ELSAEVKVALIAELAHA 139

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +  +++ +I   KTG L+ F   +  I+A  +  +   LR
Sbjct: 140 SGTYGMVGGQMLDMEGEERKLSLSELQLIHANKTGKLLTFPVVAAGIVAGLAGEDINNLR 199

Query: 212 CFGENLGIIFQLADDLLDCE------EDLPKK 237
             G  +G+ FQ+ DD+LD           PKK
Sbjct: 200 KAGSLIGLAFQVRDDILDVTASFEEIGKTPKK 231


>gi|319897071|ref|YP_004135266.1| geranyltranstransferase [Haemophilus influenzae F3031]
 gi|317432575|emb|CBY80935.1| geranyltranstransferase [Haemophilus influenzae F3031]
          Length = 296

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQIRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 295

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  LD L       +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLTPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|268324511|emb|CBH38099.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
           archaeon]
          Length = 343

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 15/237 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MNG    + QE  +  +  + +++ Q    MQ   N+ +  A+ Y    GGK++R  L  
Sbjct: 1   MNGQ---QFQEEVQYFNCRMGEVIEQK---MQRCSNEIIHDALSYIRDTGGKRLRPILCL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   A+    AIE +H  SL+HDD+  +D+ Y+RR  P+    Y E  AI+ 
Sbjct: 55  LSAEAVGGSREKAMTTAIAIELLHNASLVHDDI--IDDNYVRRKSPSNPAMYGEKKAIVI 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   + E+++              ++S   +    G      L    E   E     
Sbjct: 113 GDFLFGISCEMLAKCGVPE-----VVGLVSSAVSDIAMGEYLEFSLRTLQE-TTEQSYME 166

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +KT +    + E+GA++   S+ E    R +G+N+GI FQ+ DD+LD   D  K
Sbjct: 167 VATLKTASTFMASAEAGAMLGGGSEAEIANFRNYGKNVGIAFQIQDDILDICGDPAK 223


>gi|323340824|ref|ZP_08081076.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644]
 gi|323091947|gb|EFZ34567.1| geranyltranstransferase [Lactobacillus ruminis ATCC 25644]
          Length = 299

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/242 (34%), Positives = 126/242 (52%), Gaps = 15/242 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           N  L +   +    ++  +D  L Q  +         L  ++ Y++  GGK+IR  ++  
Sbjct: 3   NSELDNFQAKFLPLLNERMDVYLQQLDTR------KTLHDSMSYSVDAGGKRIRPMIIML 56

Query: 61  CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               F        L V A++E +H YSLIHDDLP+MDN  +RRGK T H+ + E  AI+A
Sbjct: 57  VCDSFKKKIDQDVLDVCASLEFVHTYSLIHDDLPAMDNDELRRGKATNHVVFGESMAILA 116

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+GLLT AFE +    T +    +  LM  L    G QGM+ GQ+ DI++E   +   Q+
Sbjct: 117 GDGLLTTAFECLGQ--TSISAKTKCTLMSRLAFAAGPQGMVNGQVGDIENEGVKLTLPQL 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             +   KTGAL+ +A ESG I+A  S      L+  G   G+ FQ+ DD++D     E++
Sbjct: 175 RNVHAQKTGALLRYAFESGGILAGVSDRALGELKELGNCFGLAFQIYDDIMDVVSTPEEM 234

Query: 235 PK 236
            K
Sbjct: 235 GK 236


>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
          Length = 268

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 29/227 (12%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S +   +  ++  LD       S +  +   ++  A+RY+LL GGK++R  L      L 
Sbjct: 15  SYIIRKADSVNKALD-------SAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELV 67

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A+    A+E IH  SLIHDD+                  Y E  A++AG+ LL+
Sbjct: 68  GGEESLAMPAACAVEMIHTMSLIHDDV------------------YGEDVAVLAGDALLS 109

Query: 126 YAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           +AFE ++S   +++      + +  L   IG +G++ GQ++DI +  +    +  I   K
Sbjct: 110 FAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISN--VGLEHLKFIHLHK 167

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           T AL+  +   G I+   S  E ERLR F   +G++FQ+ DD+LD  
Sbjct: 168 TAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVT 214


>gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330]
 gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
 gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12]
 gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1]
 gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330]
 gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
 gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12]
 gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1]
          Length = 296

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 7/218 (3%)

Query: 20  LDDLLLQTASHMQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL-TALRVG 76
           L  +  +  S +     DR L  A+ Y++  GGK+IR  L+    + F+        +V 
Sbjct: 11  LPAVEKEILSFLDEHTTDRALCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+GLLT AF++IS    
Sbjct: 71  AALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMA-- 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L  + +  L+  L    G QGM+ GQ  DI+ E   +   ++  I + KTG L+ +A  
Sbjct: 129 HLGHSPKLLLLQQLAVCAGSQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALL 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +G I+A   +     L+   E+LG+ FQ+ DDLLD   
Sbjct: 189 AGGILAKQPEEILLLLQRLAEHLGLAFQIRDDLLDVIG 226


>gi|163732321|ref|ZP_02139767.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149]
 gi|161394619|gb|EDQ18942.1| octaprenyl-diphosphate synthase [Roseobacter litoralis Och 149]
          Length = 333

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 114/234 (48%), Gaps = 16/234 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             + + L+ +   ++T++ +        M ++H  R+     + +  GGK++R  L    
Sbjct: 12  DRMAAYLESDMAAVNTLIRE-------RMASKHAPRIPEVTAHLVDAGGKRLRPMLTLAT 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+
Sbjct: 65  AHLCGYDGPFHINLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + +F+++    +     +R   +L+       +G +  Q+   Q+    E     + 
Sbjct: 123 YLFSRSFQLMVETGS-----LRVLDILANASATIAEGEVL-QLTASQNLATTEEIYLQVV 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + KT AL   A E G ++A A  ++   L  +G+ LG+ FQ+ DDLLD + D  
Sbjct: 177 RGKTAALFSAATEVGGVIAGAPDDQVAALFEYGDALGVAFQIVDDLLDFQGDAG 230


>gi|327402903|ref|YP_004343741.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
 gi|327318411|gb|AEA42903.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
          Length = 322

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 19/229 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L++ ++ I+  +  + L+       +   +L   +RY L LGGK++R  L      LF +
Sbjct: 4   LEQYTRFIEEKIAGINLE-------EEPRKLYDPLRYFLSLGGKRMRPILTLISGELFQI 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++  +L     IE  H +SLIHDD+  MD   +RRGKPTVHI+++   AI++G+ L    
Sbjct: 57  SNEESLSAALTIELFHNFSLIHDDI--MDEAPVRRGKPTVHIKWNSSVAILSGDVLFVEG 114

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMK 184
           ++ ++          +   +L    N     +  GQ LD+  E  D   E     + ++K
Sbjct: 115 YQQLAKYTD------KRLPILLKRFNETAIEVCQGQQLDMDFESRDDVTEEAYIEMIRLK 168

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L+  A E GAI+ + S+  +  L  FG +LGI FQ+ DD+LD   D
Sbjct: 169 TSVLLGCALEFGAILGNQSEETRNHLYHFGVSLGIAFQIQDDILDLYGD 217


>gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group]
 gi|255671156|dbj|BAF09598.2| Os02g0668100 [Oryza sativa Japonica Group]
          Length = 349

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 11/221 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  +  +R+ SA+RYA+L G       K+    L      L      
Sbjct: 55  SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 114

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL    A+E +H  SL+HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+  
Sbjct: 115 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 174

Query: 131 ISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTG 186
           + +       +   +  +++  L   +G  GM  GQ LD+     + E +V  +   K G
Sbjct: 175 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 234

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   +   GA++  A  +E+  LR +G  +G+++QL DD+
Sbjct: 235 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 275


>gi|149202965|ref|ZP_01879936.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Roseovarius sp. TM1035]
 gi|149143511|gb|EDM31547.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Roseovarius sp. TM1035]
          Length = 333

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 14/233 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + L    + ++ ++ + +    +    Q    L+ A      GGK++R  LV   A
Sbjct: 12  EQLAAHLAAKMEAVNLLIRERMASRHAPRIPQVTAHLVEA------GGKRLRPMLVLATA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  DLCGYDGPFDVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   AF+++  P +     +R   +LS       +G +  Q+   QD    E     + +
Sbjct: 124 LFARAFQLMVEPGS-----LRVLDILSNASATIAEGEVL-QLSAAQDLATTEDIYLQVVR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT AL   A E G ++A A + + + L  +G+ LGI FQ+ DDLLD + D  
Sbjct: 178 GKTAALFSAATEVGGVIAGAPETQIKALFEYGDALGIAFQIVDDLLDYQGDAK 230


>gi|157148758|ref|YP_001456077.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895]
 gi|157085963|gb|ABV15641.1| hypothetical protein CKO_04590 [Citrobacter koseri ATCC BAA-895]
          Length = 498

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 120/241 (49%), Gaps = 15/241 (6%)

Query: 3   GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58
           G +      N ++I+ +   D+    A+ ++  ++D +L++ + Y ++  GGK+IR  + 
Sbjct: 168 GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIA 227

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A          + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++
Sbjct: 228 VLAARAVGYQENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 285

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ D  I E    
Sbjct: 286 VGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYM 339

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
            +   KT  L   A +   ++A  +  +++ L+ +G  LG  FQL DDLLD   D   L 
Sbjct: 340 RVIYSKTARLFEAAAQCSGLLAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLG 399

Query: 236 K 236
           K
Sbjct: 400 K 400


>gi|224437990|ref|ZP_03658929.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
 gi|313144436|ref|ZP_07806629.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
 gi|313129467|gb|EFR47084.1| geranyltranstransferase [Helicobacter cinaedi CCUG 18818]
          Length = 289

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 85/226 (37%), Positives = 120/226 (53%), Gaps = 8/226 (3%)

Query: 14  KRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-H 69
           + I  IL D    LL  A  + + H     +       GGK+ R  LV    +       
Sbjct: 2   QHITEILHDFESFLLAQAPQIPSFHQHYEKAVWEMVQNGGKRFRPALVFSVLNALAPQLV 61

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A     +IECIH YSLIHDDLP MDN  +RRG PT+H +Y E  A++ G+GL TYAF 
Sbjct: 62  KNAFLPALSIECIHTYSLIHDDLPCMDNASLRRGHPTLHTKYGETLALLVGDGLNTYAFA 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +++  +  L   ++  L+ SL  N G+ GM+ GQMLD + E   +   Q+  I   KT  
Sbjct: 122 LLAQAR--LDSQLKLALIESLAINAGIGGMVLGQMLDCEFENQALALEQLQTIHTNKTAK 179

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  + E GAI+A+A    ++ L  FG  LG+ FQL DD++D  +D
Sbjct: 180 LIATSLEFGAIIANADSKLRKALYDFGLKLGVYFQLRDDIIDICQD 225


>gi|296313619|ref|ZP_06863560.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC
           43768]
 gi|296839857|gb|EFH23795.1| octaprenyl-diphosphate synthase [Neisseria polysaccharea ATCC
           43768]
          Length = 324

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++        D++R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
          Length = 295

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  LD L       +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALDALFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|294789125|ref|ZP_06754364.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453]
 gi|294482866|gb|EFG30554.1| geranyltranstransferase [Simonsiella muelleri ATCC 29453]
          Length = 297

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 129/235 (54%), Gaps = 6/235 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           + + L++  +R      ++LL+ A     Q  + L  A+RY  L GGK++R  LV   A 
Sbjct: 2   ITNNLKQWQQR-AQAQTEILLERALPSINQAPETLHEAMRYVTLGGGKRLRPLLVWAAAE 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L +           A+ECIH YSL+HDD+P+MDN  +RRGKPT H+QYDE TA++ G+ L
Sbjct: 61  LGDSVQAACEAAAVAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEPTALLVGDAL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQ 181
            T AF+++S+  T L    + +++  L    G  GM GGQ +D+ +  +D +  Q+  + 
Sbjct: 121 QTLAFDVLSTA-TALSPARQIRMINVLAKASGSMGMAGGQAIDLANVGVDLSQIQLEQMH 179

Query: 182 KMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             KTGAL+  A   GA+       N    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 180 GWKTGALIRAAVALGALSCPDLDDNALAALDNYATKLGLAFQVIDDVLDCEADTA 234


>gi|332829987|gb|EGK02615.1| hypothetical protein HMPREF9455_00865 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 326

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 15/236 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           ++++    D +LD +  +            L   I Y L LGGK++R  L     +L+  
Sbjct: 1   MKKSLYNFDEVLDIVNTRITQINYKNKPQSLFDPITYILSLGGKRVRPALALMSYNLYKE 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    + +  AIE  H ++L+HDDL  MD   +RRGKPTVHI++++ TA+++G+ +L  A
Sbjct: 61  DVERVIPIALAIEVFHNFTLLHDDL--MDRADMRRGKPTVHIRWNDNTAVLSGDAMLIEA 118

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK 184
           ++ I+   ++    +          +     +  GQ  D++ E    +   +   + ++K
Sbjct: 119 YKEIAKTDSEQLPRVL------DLFSETATEICCGQQYDMEFEQRLDVTIPEYLEMIRLK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           T  L+  A + GAI+A A   + + L  FG N+G+ FQL DDLLD   D     KK
Sbjct: 173 TAVLLGCALKEGAIVAGAPDADADNLYEFGINVGLGFQLKDDLLDVYGDSESFGKK 228


>gi|116753785|ref|YP_842903.1| farnesyltranstransferase [Methanosaeta thermophila PT]
 gi|116665236|gb|ABK14263.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Methanosaeta thermophila PT]
          Length = 327

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 20/242 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
           G L ++L+  +  I   +D+LL            + L  A R+ L  GGK++R  L+   
Sbjct: 7   GDLEAELRRRADLISKAIDELL-------PVSRPEGLYDAARHLLGAGGKRLRPSLLLIA 59

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +    +    AIE +H ++LIHDD+  MDN  +RRGKP VH+ +    AI+AG+
Sbjct: 60  GESVGCDAARLVPAAVAIELVHNFTLIHDDI--MDNASLRRGKPAVHVIWGTSGAILAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L + AFE++S      +  + +  ML+ T       +  GQ  D    + E + E +  
Sbjct: 118 TLYSKAFEMLSMVDAPPERVLAAMDMLARTCTS----ICEGQWQDLEFERAESVTEKEYL 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LP 235
            + + KTG L   +   GA +  A       L  FG   G+ FQ+ DD+LD    ED L 
Sbjct: 174 EMIEKKTGVLYGASAWIGATLGGAPPEVAGGLEEFGRLTGMGFQIHDDILDLTVPEDVLG 233

Query: 236 KK 237
           K+
Sbjct: 234 KR 235


>gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
 gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
          Length = 293

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 11/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L+  L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLGRVEAALEHYLP-----AETIEPAKLHEAVRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGARAECLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF  ++S    L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTSD--VLAPAQQAALVRELALASGSIGMCGGQAIDLASVGHTLTREQLETMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+   A      R L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 RMKTGALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSA 230


>gi|162147645|ref|YP_001602106.1| geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542274|ref|YP_002274503.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786222|emb|CAP55804.1| Geranyltranstransferase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529951|gb|ACI49888.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 311

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           L S L   +  I+  +D LL             R++ A+RYA L GGK++R +L  E AS
Sbjct: 20  LRSSLSNRATAIEAAIDSLLPPV-----PGAEGRVVDAMRYATLGGGKRLRGYLTAEVAS 74

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF V    A RV A++E +H YSL+HDDLP+MDN  +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 75  LFGVEPARAYRVAASVEMLHAYSLVHDDLPAMDNDDLRRGQPSTHRKFDEATAILAGDAL 134

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T AFEI++   T     IR  L+ +L    G  GM+GGQM+D+  E   +   +V  + 
Sbjct: 135 QTMAFEILTDTATHPSATIRIGLVAALAAASGAAGMVGGQMIDMDGEGRALSLPEVERLH 194

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +KTG L+ +A E+GAI+  A    + R+  +G +LG  FQ+ADD+LD     E+L K
Sbjct: 195 ALKTGCLIRYAAEAGAILGDADLPARARIAAYGRDLGAAFQIADDVLDATASAEELGK 252


>gi|148825981|ref|YP_001290734.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittEE]
 gi|229846704|ref|ZP_04466811.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           7P49H1]
 gi|148716141|gb|ABQ98351.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           PittEE]
 gi|229810193|gb|EEP45912.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           7P49H1]
          Length = 296

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 11/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GNFSEELQQVQIRINRFLEAQFDGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L ++AFEI++     +    +  L+  L    G+QGM  GQ LD+  E   I  +++ +
Sbjct: 117 ALQSFAFEILTK-TPNISAEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELEL 175

Query: 180 IQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  A + G I +     +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 176 IHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 233


>gi|262277469|ref|ZP_06055262.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha
           proteobacterium HIMB114]
 gi|262224572|gb|EEY75031.1| geranyltranstransferase (Farnesyl-diphosphate synthase) [alpha
           proteobacterium HIMB114]
          Length = 292

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 83/233 (35%), Positives = 136/233 (58%), Gaps = 10/233 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                +L+  + +++  L       ++      ++RL  A+ Y L  GGK IRS+LV   
Sbjct: 2   SNFQQELKLTADKVNAFLKSYFKNQSA------DNRLYEAMEYGLFSGGKMIRSYLVQST 55

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +F+++    + + AA+EC+H YSLIHDDLPSMDN   RRGK + H  Y E TAI+AG+
Sbjct: 56  CKIFDIDEKKYIPIAAAVECVHSYSLIHDDLPSMDNDDFRRGKESTHKAYGEYTAILAGS 115

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
            LLT AFE+IS PK ++ ++I+++++ +L+ + G  G+ GGQ  D  ++   +D+  +  
Sbjct: 116 SLLTLAFEMISDPKFEIDEDIKTKIIHALSSSSGHLGIAGGQFFDLSLKKSEVDKETIID 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q  KTGALM F  E   +++H  +   +  +  G  +G++FQ+ DD LD   
Sbjct: 176 MQNKKTGALMGFCTEVAPLLSH-KKELAKTFKDLGIKIGLLFQIVDDFLDKYG 227


>gi|189461913|ref|ZP_03010698.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136]
 gi|189431307|gb|EDV00292.1| hypothetical protein BACCOP_02579 [Bacteroides coprocola DSM 17136]
          Length = 327

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 18/228 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E  K+I   ++ L         +     L   I Y L LGGK++R  L+    +LF  +
Sbjct: 7   KELLKQIHAYIESL-------PYSHEPKGLYDPIEYVLGLGGKRLRPVLMLLAYNLFKED 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                   AAIE  H ++L+HDDL  MD   +RRGKPTVH ++DE TAI++G+ +L  +F
Sbjct: 60  VQAIFSQAAAIETYHNFTLLHDDL--MDKADMRRGKPTVHKKWDENTAILSGDAMLILSF 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKT 185
           + +      ++   +   + S T       +  GQ  D++ E  ++    +   + ++KT
Sbjct: 118 QFMMQ-GCPVEYTHQVMDIFSRT----ALEVCDGQQWDMEFESREDVTVDEYMEMIRLKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L+  A + GA++  AS+ + + L  FG  +G+ FQL DD LD   D
Sbjct: 173 SVLLAGALKIGAVLGGASEKDAQLLYDFGIQIGLAFQLQDDYLDVYGD 220


>gi|83945403|ref|ZP_00957751.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633]
 gi|83851237|gb|EAP89094.1| geranyltranstransferase [Oceanicaulis alexandrii HTCC2633]
          Length = 296

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 95/236 (40%), Positives = 146/236 (61%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
               + L E + R+   LD LL +           R++SA+RYA LG GK++R FL+ E 
Sbjct: 2   SAFDTHLTETADRVTVALDALLARPDGP-----EARVISAMRYAALGPGKRLRPFLLIEA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L   +    LR   A+EC+H YSL+HDDLP MD+  +RRG+PTVH +YDE TA++AG+
Sbjct: 57  GFLVGADERALLRAACAVECVHAYSLVHDDLPCMDDDDLRRGRPTVHKEYDEATAVLAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VF 178
            L + AFE+++ P+T     +R++L+L L+   G +GM+GGQM+D+  E  + +    + 
Sbjct: 117 ALQSQAFELLADPETHSNPAVRAELVLRLSKASGPRGMVGGQMIDMAVEAGELSDIGIIT 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             Q+MKTGAL+ F  E+G ++A+A + ++  L  F  +LG+ +Q+ DDLLD E D 
Sbjct: 177 RCQRMKTGALISFCAEAGGVIANADRAQRIALEGFAHDLGLCYQIVDDLLDAEGDE 232


>gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
 gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
          Length = 294

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 117/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +T   ++L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AETAVPEKLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDAAA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|308174223|ref|YP_003920928.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
 gi|307607087|emb|CBI43458.1| geranyltranstransferase [Bacillus amyloliquefaciens DSM 7]
 gi|328554168|gb|AEB24660.1| geranyltranstransferase [Bacillus amyloliquefaciens TA208]
 gi|328912560|gb|AEB64156.1| geranyltranstransferase [Bacillus amyloliquefaciens LL3]
          Length = 296

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 10/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L + L    + I+  L      +    +    + L  ++ Y+L  GGK++R  +V 
Sbjct: 1   MTNKLDAFLASRKQMIEQQL------SLYTERLDMPESLKKSMLYSLEAGGKRLRPLVVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              + +  +    + VG A+E IH YSLIHDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 55  AVLNAYGKDEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAAAVLA 114

Query: 120 GNGLLTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQ 176
           G+GLLT +F++I+S    ++    R +L+  L    G +GM+GGQ  D++ E   +   +
Sbjct: 115 GDGLLTESFKLITSHVSEEVSAEKRLRLVDELISAAGTEGMVGGQAADMEAEQKQVTLKE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I + KT  L+ F+  +GAI+A A ++E E+LR F  ++GI FQ+ DD+LD E    K
Sbjct: 175 LESIHERKTAKLLGFSVTAGAILADAPEDEIEKLRLFSSHIGIGFQIRDDILDIEGHEEK 234


>gi|307565038|ref|ZP_07627551.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
 gi|307346207|gb|EFN91531.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
          Length = 324

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 15/226 (6%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +S +I +I+++ +   A     +    L   I+Y L LGGK+IR  L+    +++  +  
Sbjct: 3   SSDKIFSIINNYIATLAY---DREPKSLYEPIKYVLSLGGKRIRPVLMLLAYNMYKDDPE 59

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           + L     +E  H Y+L+HDDL  MD+  +RRG  TVH +++  TAI++G+ +L  AFE 
Sbjct: 60  SILNQACGLETYHNYTLLHDDL--MDSAPLRRGHQTVHEKWNANTAILSGDTMLVLAFER 117

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187
           I+               L     +    +  GQ LD++ E    + E +   + ++KT  
Sbjct: 118 ITRGNPSC------LKALLDLFTVTALEIGEGQQLDMEFEHRNDVTEAEYIEMIRLKTSV 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  A + GA++ +AS+ +   L  FGE +G+ FQL DD LD   D
Sbjct: 172 LLACALKMGAMLGNASEKDANNLYLFGEKIGLAFQLQDDYLDVYGD 217


>gi|222087742|ref|YP_002546279.1| geranyltranstransferase protein [Agrobacterium radiobacter K84]
 gi|221725190|gb|ACM28346.1| geranyltranstransferase protein [Agrobacterium radiobacter K84]
          Length = 304

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 116/236 (49%), Positives = 163/236 (69%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
                 L++N+ +++ +L  LL     + +     RLL A+R+  L GGK++R FLV E 
Sbjct: 6   SSFEHHLRDNAGKVEAVLSRLLADARLNDEIARPARLLEAMRHGVLNGGKRLRPFLVMET 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   N   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVHI +D  TAI+AG+
Sbjct: 66  AALLGGNADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDYATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
            LLTYAF+II++P+T L  + + +L+L+L+   G+ GM GGQ LD+  E +  DE  +  
Sbjct: 126 SLLTYAFDIIAAPETDLPADRKMELVLALSRAAGIGGMAGGQALDLAAEKVTPDEQGITT 185

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GAIMA AS  +++RLR FGE +G+ FQLADDLLD   D  
Sbjct: 186 LQAMKTGALIRFACEAGAIMAGASAGDRQRLRSFGEKIGLAFQLADDLLDLTADAA 241


>gi|206576602|ref|YP_002240111.1| geranyltranstransferase [Klebsiella pneumoniae 342]
 gi|288936860|ref|YP_003440919.1| polyprenyl synthetase [Klebsiella variicola At-22]
 gi|290510084|ref|ZP_06549454.1| geranyltranstransferase [Klebsiella sp. 1_1_55]
 gi|206565660|gb|ACI07436.1| geranyltranstransferase [Klebsiella pneumoniae 342]
 gi|288891569|gb|ADC59887.1| Polyprenyl synthetase [Klebsiella variicola At-22]
 gi|289776800|gb|EFD84798.1| geranyltranstransferase [Klebsiella sp. 1_1_55]
          Length = 299

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 93/242 (38%), Positives = 133/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +LQ   ++ +  L   +       Q   N  L+ A+ Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLQACVEQANGALRRFIAP-----QPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F V+  T     AA+ECIH YSL+HDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  AMFGVSRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S  P   + D  R  ++  L    G+ GM GGQ LD++ E   +D   +  
Sbjct: 117 LQTLAFSILSDAPMADVSDRDRLAMVSELAQASGVAGMCGGQALDLEAEGQQVDLQALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + EN+G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRMGALSAGERGRAALPALDRYAENIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|15676243|ref|NP_273375.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58]
 gi|161870743|ref|YP_001599916.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442]
 gi|218768897|ref|YP_002343409.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491]
 gi|7225547|gb|AAF40771.1| octaprenyl-diphosphate synthase [Neisseria meningitidis MC58]
 gi|121052905|emb|CAM09257.1| octaprenyl-diphosphate synthase [Neisseria meningitidis Z2491]
 gi|161596296|gb|ABX73956.1| octaprenyl-diphosphate synthase [Neisseria meningitidis 053442]
 gi|254670157|emb|CBA05202.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha153]
 gi|316984329|gb|EFV63303.1| polyprenyl synthetase family protein [Neisseria meningitidis
           H44/76]
 gi|319411198|emb|CBY91603.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase; OPP synthetase) [Neisseria meningitidis WUE
           2594]
 gi|325128912|gb|EGC51766.1| octaprenyl-diphosphate synthase [Neisseria meningitidis N1568]
 gi|325140975|gb|EGC63481.1| octaprenyl-diphosphate synthase [Neisseria meningitidis CU385]
 gi|325198983|gb|ADY94439.1| octaprenyl-diphosphate synthase [Neisseria meningitidis G2136]
 gi|325199520|gb|ADY94975.1| octaprenyl-diphosphate synthase [Neisseria meningitidis H44/76]
          Length = 324

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|16126308|ref|NP_420872.1| geranyltranstransferase [Caulobacter crescentus CB15]
 gi|221235087|ref|YP_002517523.1| dimethylallyltransferase/geranyltranstransferase [Caulobacter
           crescentus NA1000]
 gi|13423548|gb|AAK24040.1| geranyltranstransferase [Caulobacter crescentus CB15]
 gi|220964259|gb|ACL95615.1| dimethylallyltransferase/Geranyltranstransferase [Caulobacter
           crescentus NA1000]
          Length = 294

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 98/234 (41%), Positives = 142/234 (60%), Gaps = 6/234 (2%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
             L  ++ + +  +   LD+LL +           RL  A+RYA LG GK++R F   E 
Sbjct: 2   SDLAKRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRPFFALET 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +F++     LR   A+ECIH YSL+HDDLP+MD+  +RRG+PTVH QYDE TAI+AG+
Sbjct: 57  GKMFDLPERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L T AFEI++ P T    ++RS+L+  L    G +GM GGQM+D+     D   V  +Q
Sbjct: 117 ALQTAAFEIMAHPDTHDDGHVRSELVRKLAIASGARGMCGGQMIDLLGVRDDLGAVARMQ 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++KTGAL+ FA E   I+A A ++E+  L  F ++LG+ +Q+ DD+LD E D  
Sbjct: 177 RLKTGALIAFAFEIPLIIARAKESERSALMAFAQDLGLAYQIVDDILDAEGDEE 230


>gi|167627431|ref|YP_001677931.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597432|gb|ABZ87430.1| geranyltranstransferase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 293

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 123/222 (55%), Gaps = 8/222 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++  + A       + +L  A++Y+   GGK+IR+  V      FN++     ++  AIE
Sbjct: 11  NIFSEKAFSEIQSPSKKLKEAMKYSFFSGGKRIRAQFVYALGEAFNIDLQNCHKIAFAIE 70

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
           CIH YSLIHDDLP+MDN  +RRGKPT HI+++E TAI+AG+ L +  FEII++       
Sbjct: 71  CIHTYSLIHDDLPAMDNDVLRRGKPTCHIKFNEATAILAGDALQSLGFEIINTLDINDIY 130

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            ++   ++      GL+GM+GGQ   +D +++ +    + ++   KT  +   +     I
Sbjct: 131 KLKKVNIV-FAKCCGLEGMVGGQQLDIDGENQNLKLQDLEILHINKTAKMFRASIVLPYI 189

Query: 199 MAHASQNEKE-RLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           ++  + +E E  L    + +G+ FQ+ DD+LD     ++L K
Sbjct: 190 VSKYNNDEFETILTKVSDLIGLCFQIKDDILDVTRSTQELGK 231


>gi|329895161|ref|ZP_08270845.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
 gi|328922475|gb|EGG29816.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
          Length = 298

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 87/241 (36%), Positives = 127/241 (52%), Gaps = 16/241 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +   L     R++  L   L Q       +   +L  A+ Y+L +GGK++R  LV   A+
Sbjct: 2   IEQHLNACKARVEACLVAQLNQL-----PRSEVQLADAVAYSLKVGGKRLRPALVYSAAA 56

Query: 64  -------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
                  LF  N        AAIE IH YSL+HDDLP+MDN  +RRG+PTVH QYDE TA
Sbjct: 57  SLRADLTLFPPNLTPLDLAAAAIESIHTYSLVHDDLPAMDNDDLRRGQPTVHRQYDEATA 116

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-- 174
           I+ G+ L  +AFE+++   T   D + + ++  L    G +GM+ GQ LD+Q     E  
Sbjct: 117 ILVGDALQAWAFELLTQIDTLPADKVVA-MVKELAQASGPKGMVLGQALDMQATGASESV 175

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             +  +  +KTGAL+  A   GA   +A   E+  L  +G+ +G+ FQ+ DD+LD   D 
Sbjct: 176 DYLKQLHSLKTGALIRSALRLGAYCMNAGSKERRVLSAYGDAIGLCFQVVDDILDVTTDS 235

Query: 235 P 235
            
Sbjct: 236 A 236


>gi|134095950|ref|YP_001101025.1| octaprenyl diphosphate synthase [Herminiimonas arsenicoxydans]
 gi|133739853|emb|CAL62904.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Herminiimonas
           arsenicoxydans]
          Length = 329

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   +  +   +D ++   L    + +  Q  D ++SA      GGK+IR  LV   A+ 
Sbjct: 13  LIQPIAADMSAVDAVIRQKLHSEVA-LVNQIADYIISA------GGKRIRPVLVLLMANA 65

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 66  LGYRGTHQYDLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDFLH 123

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++ +       NIR+  +L+   N+  +G +  Q+L++ D  I E +   + + K
Sbjct: 124 SRAFQMMVTVG-----NIRAMQILADATNVIAEGEVL-QLLNMHDPDISEERYTQVIRSK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           T  L   A + GA++A AS++E E    +G +LG  FQL DD+LD      D+ K
Sbjct: 178 TAKLFEAAAQLGALIAGASEDEIEAAAEYGRSLGTAFQLIDDVLDYSGHAEDIGK 232


>gi|86130739|ref|ZP_01049338.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
 gi|85818150|gb|EAQ39310.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
          Length = 324

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 12/215 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
            L     H   +    L   I Y L LGGK++R  L      LF  ++  AL    A+E 
Sbjct: 11  FLEYLNKHALEKEPKNLYEPINYILQLGGKRLRPVLTLMACELFEKDYKDALDAALAVEI 70

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
            H +SL+HDD+  MD+  +RRG+ TVH ++D  T I++G+ +L  A+++  + +      
Sbjct: 71  FHNFSLVHDDI--MDDAPLRRGEETVHEKWDINTGILSGDAMLIRAYQLFENYEGATFKE 128

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAI 198
                 L+   +     +  GQ  D+  E  D+    +   + + KT  L+  A + GAI
Sbjct: 129 ------LAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAI 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +A AS++ +E +  +G +LG+ FQL DD LD   D
Sbjct: 183 VAGASKSCQEGIYNYGRDLGLAFQLQDDYLDAFGD 217


>gi|330899928|gb|EGH31347.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 281

 Score =  201 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  LD L       +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|261391852|emb|CAX49311.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase; OPP synthetase) [Neisseria meningitidis
           8013]
          Length = 324

 Score =  201 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 295

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|212693605|ref|ZP_03301733.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855]
 gi|237708764|ref|ZP_04539245.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724205|ref|ZP_04554686.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265755969|ref|ZP_06090436.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212663858|gb|EEB24432.1| hypothetical protein BACDOR_03123 [Bacteroides dorei DSM 17855]
 gi|229437393|gb|EEO47470.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229457190|gb|EEO62911.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263234047|gb|EEZ19648.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 325

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 70/220 (31%), Positives = 112/220 (50%), Gaps = 12/220 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           + +LD +    A+    +    L + I Y L LGGK+IR  L+     L+  N    L  
Sbjct: 6   EQLLDKVNTYLATMPYMREPKGLYAPIEYVLSLGGKRIRPVLMLLSYQLYKENVDDILSQ 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE  H Y+L+HDDL  MD   +RR KPTVH  +DE TAI++G+ +L  A+ ++    
Sbjct: 66  AAGIETYHNYTLLHDDL--MDRADMRRNKPTVHKVWDENTAILSGDAMLVLAYRLM---- 119

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFA 192
               D+   Q+M   +       +  GQ  D++ E   +   ++   + ++KT  L+  A
Sbjct: 120 NNCPDSYLKQVMDIFSQTA--LEICEGQQWDMEFETRSDVTVSEYIEMIRLKTSVLLSAA 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + GA++  AS+ + ++L  FG  +G+ FQL DD LD   
Sbjct: 178 LKIGAVLGDASEEDAQKLYDFGIKMGLAFQLQDDFLDVYG 217


>gi|258542579|ref|YP_003188012.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633657|dbj|BAH99632.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636716|dbj|BAI02685.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639769|dbj|BAI05731.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642825|dbj|BAI08780.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645880|dbj|BAI11828.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648933|dbj|BAI14874.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651920|dbj|BAI17854.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654977|dbj|BAI20904.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 312

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 98/238 (41%), Positives = 149/238 (62%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           L   +   ++ I+  +D LL      + T  + RL+ A+RYA L GGK++R +L    AS
Sbjct: 21  LKQDMGARARVIEHTIDTLLP-----LTTGGDARLIEAMRYATLGGGKRLRGYLAIVTAS 75

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF V    + RV A++E +H YSL+HDDLP+MD+  +RRG+P+ H Q+DE TAI+AG+ L
Sbjct: 76  LFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRQFDEATAILAGDAL 135

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T AFEI+++ +T    N+R  L+ +     G  GM+GGQM+D++ E   +   +V  + 
Sbjct: 136 QTKAFEILAASQTHTDANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLEEVRHLH 195

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +KTG L+ ++ ESGAI+  AS + + RLR +G N+G  FQ+ADD+LD     E+L K
Sbjct: 196 ALKTGCLIRYSAESGAILGQASPDLRRRLRSYGANIGAAFQIADDVLDATATAEELGK 253


>gi|229579956|ref|YP_002838355.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14]
 gi|228010671|gb|ACP46433.1| Farnesyltranstransferase [Sulfolobus islandicus Y.G.57.14]
          Length = 331

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L S   +    ++  + + +      ++        ++      GGK++R  ++  
Sbjct: 1   MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L   +   A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG
Sbjct: 54  SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + L   AFE ++     L  +   +      ++I +  +  GQ +D+  E    + E + 
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + K KT  L   +   G I+  AS +  + L  +G NLGI FQ+ DD+L    D  
Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEK 227


>gi|89889496|ref|ZP_01201007.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
 gi|89517769|gb|EAS20425.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
          Length = 327

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 15/222 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
            L    S +  Q    L   + Y L LGGK++R  L    A ++      A+    A+E 
Sbjct: 11  FLEALNSRVTAQEPASLYDPVHYILQLGGKRLRPILTLMSAQMYGGKIDKAMDAAIAVEV 70

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
            H ++L+HDD+  MD+  +RRGK TVH+++D  T I++G+ +L  A+++ +S   +    
Sbjct: 71  FHNFTLLHDDI--MDDADLRRGKETVHVKWDVNTGILSGDAMLIMAYQLFNSYDPETF-- 126

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198
                 L+   +     +  GQ  D+  E  D+   ++   + K+KT  L+  A + GAI
Sbjct: 127 ----YWLNQVFSKTALEVCEGQQYDVDFETRDDVTISEYINMIKLKTSVLVGCALQMGAI 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +A  ++ E++ +  +G N+G+ FQL DD LD   D     K+
Sbjct: 183 IAGVNKKEQQLIYDYGINIGLAFQLMDDYLDAFGDPATFGKE 224


>gi|329115335|ref|ZP_08244089.1| Geranyltranstransferase [Acetobacter pomorum DM001]
 gi|326695314|gb|EGE47001.1| Geranyltranstransferase [Acetobacter pomorum DM001]
          Length = 312

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 98/238 (41%), Positives = 149/238 (62%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           L   +   ++ I+  +D LL      + T  + RL+ A+RYA L GGK++R +L    AS
Sbjct: 21  LKQDMGARARVIEHTIDTLLP-----LTTGGDARLIEAMRYATLGGGKRLRGYLAIVTAS 75

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF V    + RV A++E +H YSL+HDDLP+MD+  +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 76  LFGVPESQSARVAASVEMLHAYSLVHDDLPAMDDDDMRRGQPSTHRKFDEATAILAGDAL 135

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T AFEI+++ +T    N+R  L+ +     G  GM+GGQM+D++ E   +   +V  + 
Sbjct: 136 QTKAFEILAASQTHADANVRIDLISAFAEASGAAGMVGGQMIDMEGEGRALPLAEVRHLH 195

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +KTG L+ ++ ESGAI+  AS N + RLR +G N+G  FQ+ADD+LD     E+L K
Sbjct: 196 ALKTGCLIRYSAESGAILGQASPNLRRRLRSYGANIGAAFQIADDVLDATATAEELGK 253


>gi|261378523|ref|ZP_05983096.1| geranyltranstransferase [Neisseria cinerea ATCC 14685]
 gi|269145073|gb|EEZ71491.1| geranyltranstransferase [Neisseria cinerea ATCC 14685]
          Length = 298

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKTWQQRAQAQTELLLERFLPS-----EGEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H++Y E TA++ G
Sbjct: 59  ASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLVG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L T AF++++ P + L  + +  ++  L    G  GM GGQ +D+ +  + + +T + 
Sbjct: 119 DALQTQAFDVLARP-SSLPASRQLAMLSVLAKAGGSSGMAGGQAIDLANVGKQMAQTDLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   + S+N    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSENSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|329116734|ref|ZP_08245451.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020]
 gi|326907139|gb|EGE54053.1| geranyltranstransferase [Streptococcus parauberis NCFD 2020]
          Length = 289

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 81/233 (34%), Positives = 123/233 (52%), Gaps = 14/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E   +I+  +     ++    Q      L+ +I Y++  GGK+IR   + E    FN+  
Sbjct: 2   EKLTKINQTISHFYQKSNLVSQD-----LIDSIIYSVDSGGKRIRPLFLLESLEAFNITL 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E +H  SLIHDDLP+MDN   RRG+ T H Q+DE TAI+AG+ L    F
Sbjct: 57  TEDHFKVAAALEMVHTGSLIHDDLPAMDNDEYRRGRLTNHKQFDEATAILAGDSLFIDPF 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTG 186
            +I+   T     ++  L+  L++  G  GM+GGQMLD++  D+ +   ++  I   KTG
Sbjct: 117 SLIAE--TNFLPQVKVDLIAQLSNAAGTFGMVGGQMLDMRAEDQKLGIEELQGIHSHKTG 174

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   + AI+A    +    L   GE +G  FQ+ DD+LD     EDL K
Sbjct: 175 KLLAYPFMAAAIIAQLPADMISDLTRAGELIGHAFQVRDDILDITAKFEDLGK 227


>gi|325981722|ref|YP_004294124.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212]
 gi|325531241|gb|ADZ25962.1| Trans-hexaprenyltranstransferase [Nitrosomonas sp. AL212]
          Length = 322

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 19/230 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLS-------AIRYAL-LGGKKIRSFLVTECASLFNVNH 69
             +   + Q  S +     ++L S          Y +  GGK++R  LV   A  F  + 
Sbjct: 4   EYIRSFIAQDMSIVDNVIREKLHSHVLLIRQVSEYIINSGGKRLRPALVILSAGAFGYSG 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                + A IE IH  +L+HDD+  +D   +RR + T +  +    +++ G+ L + AF+
Sbjct: 64  KFHYNLAAVIEFIHTATLLHDDV--VDESELRRNRETANALFGNAASVLVGDFLYSRAFQ 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++        DN+R   +L+   N   +G +  Q+L+ +D  + E     + + KT  L 
Sbjct: 122 MMVE-----VDNMRVMQVLADATNTIAEGEVL-QLLNCRDPQVSEENYLQVIRFKTAKLF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             A   GAI+ +A+  E+  +  +G +LG  FQL DD+LD      D+ K
Sbjct: 176 EAASRLGAILGNATSEEENAMAVYGMHLGTAFQLVDDMLDYSGNNHDIGK 225


>gi|304386506|ref|ZP_07368794.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091]
 gi|304339335|gb|EFM05407.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ATCC 13091]
          Length = 324

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVDSGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|261365500|ref|ZP_05978383.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996]
 gi|288566037|gb|EFC87597.1| octaprenyl-diphosphate synthase [Neisseria mucosa ATCC 25996]
          Length = 324

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  R++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLSRVNEVINKAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKS 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDGDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVDSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEAQYVQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+ +A    ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGNAPPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|30249867|ref|NP_841937.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
 gi|30180904|emb|CAD85826.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 322

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 13/218 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           D ++Q   H Q     ++   I ++  GGK++R  LV   A LF+   L    + A +E 
Sbjct: 18  DNVIQQKLHSQVALVRQVSEYIIHS--GGKRLRPALVILAAGLFDYKGLHHHNLAAVVEF 75

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  +L+HDD+  +D   +RR + T +  +    +++ G+ L + AF+++         N
Sbjct: 76  IHTATLLHDDV--VDESELRRNQATANALFGNAASVLVGDFLYSRAFQMMVEVG-----N 128

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +R   +L+   N   +G +  Q+L+ +D  ++E     + + KT  L   A   GAI+  
Sbjct: 129 MRVMEVLADATNTIAEGEVL-QLLNCRDPDVEEENYLQVIRFKTAKLFEAAARLGAILGG 187

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           A+  E+E L  +G +LG  FQL DDLLD      D  K
Sbjct: 188 ATPAEEEALAAYGMHLGTAFQLVDDLLDYSGNDQDTGK 225


>gi|291086510|ref|ZP_06571551.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220]
 gi|291067630|gb|EFE05739.1| octaprenyl-diphosphate synthase [Citrobacter youngae ATCC 29220]
          Length = 498

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 118/232 (50%), Gaps = 15/232 (6%)

Query: 12  NSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +   D+    A+ ++  ++D +L++ + Y ++  GGK+IR  +    A     
Sbjct: 177 NLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 236

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 237 QENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 294

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 295 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 348

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           L   A +   I+A  S  +++ L+ +G  LG  FQL DDLLD   D   L K
Sbjct: 349 LFEAAAQCSGILAGCSAEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGK 400


>gi|302343358|ref|YP_003807887.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639971|gb|ADK85293.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
          Length = 297

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 123/240 (51%), Gaps = 11/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+  L   L +  + +D  L+  L         +    +L A+RY+L  GGK++R  L  
Sbjct: 1   MSVDLKQYLAQRRQMVDAALEAWLP------ADESGGVILKAMRYSLFAGGKRLRPILCL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   A+    A+E IH YSLIHDDLP+MD+   RRG PT H  + +  A++A
Sbjct: 55  AGAEAVGGDPRRAMFCACALEMIHTYSLIHDDLPAMDDDDYRRGVPTNHKVFGQGMAVLA 114

Query: 120 GNGLLTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DET 175
           G+GLLT A  +++       L      Q    +    G  GM+GGQ  D+  E +  D  
Sbjct: 115 GDGLLTQAMVLLTDAAAVGDLPAERARQAANVVMRAAGHLGMVGGQAADLLAETMEPDLA 174

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            V  I   KTGAL+C + E+G I+A A ++   RL  +G  +G+ FQ+ADDLLD E D  
Sbjct: 175 MVDYIHARKTGALICASLEAGGILAGADRDRLSRLVRYGRRIGLAFQIADDLLDLEGDAE 234


>gi|227831075|ref|YP_002832855.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15]
 gi|229581383|ref|YP_002839782.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51]
 gi|238620509|ref|YP_002915335.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4]
 gi|284998571|ref|YP_003420339.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5]
 gi|227457523|gb|ACP36210.1| Farnesyltranstransferase [Sulfolobus islandicus L.S.2.15]
 gi|228012099|gb|ACP47860.1| Farnesyltranstransferase [Sulfolobus islandicus Y.N.15.51]
 gi|238381579|gb|ACR42667.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.4]
 gi|284446467|gb|ADB87969.1| Farnesyltranstransferase [Sulfolobus islandicus L.D.8.5]
          Length = 331

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L S   +    ++  + + +      ++        ++      GGK++R  ++  
Sbjct: 1   MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L   +   A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG
Sbjct: 54  SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + L   AFE ++     L  +   +      ++I +  +  GQ +D+  E    + E + 
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + K KT  L   +   G I+  AS +  + L  +G NLGI FQ+ DD+L    D  
Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLVEYGLNLGISFQIVDDILGIIGDEK 227


>gi|260429621|ref|ZP_05783598.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45]
 gi|260420244|gb|EEX13497.1| octaprenyl-diphosphate synthase [Citreicella sp. SE45]
          Length = 333

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 14/231 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L   L E+   ++ ++ + +    +    +    L+ A      GGK++R  L    A
Sbjct: 12  DRLAELLSEDMGGVNALIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLASA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  RLCGYEGPYHVHLAATVEFIHTATLLHDDV--VDESSQRRGRPTANLLWDNKSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +F+++  P      N+R   +LS       +G +  Q+   QD    E     + +
Sbjct: 124 LFARSFQLMVEPG-----NLRVLNILSNAAATIAEGEVL-QLTAAQDLKTTEDIYLQVVR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT AL   A E G ++A   + + + L  +G+ LGI FQ+ADDLLD + D
Sbjct: 178 GKTAALFSAATEVGGVIAGVPEEQVQALFTYGDALGIAFQIADDLLDYQGD 228


>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|298484883|ref|ZP_07002982.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 295

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 295

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEGLFQAPSPEL-----TRLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q     L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|288928474|ref|ZP_06422321.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331308|gb|EFC69892.1| polyprenyl synthetase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 324

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D IL  +     +    +    L   IRY L +GGK+IR  L     +LF  +  + L  
Sbjct: 5   DLILSKINAYLEALPFNRKPQSLYEPIRYVLSIGGKRIRPALALLAYNLFKDDPESILAP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E  H Y+L+HDDL  MDN  +RRGKPTVH ++D  TAI++G+ +L  A+++++   
Sbjct: 65  ACGLETYHNYTLLHDDL--MDNAALRRGKPTVHKRWDANTAILSGDSMLVLAYQLVAQC- 121

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
               D  + + ++ L     L  +  GQ  D+  E    + E +   + ++KT  L+  A
Sbjct: 122 ----DAAKLKPVMELFTETAL-EIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACA 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + GA++A A Q + + L  FGE +G+ FQL DD LD   D  
Sbjct: 177 MKMGALLADAPQRDADLLYKFGEQIGLAFQLQDDFLDVYGDSK 219


>gi|239637669|ref|ZP_04678641.1| geranyltranstransferase [Staphylococcus warneri L37603]
 gi|239596887|gb|EEQ79412.1| geranyltranstransferase [Staphylococcus warneri L37603]
          Length = 292

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 86/230 (37%), Positives = 131/230 (56%), Gaps = 8/230 (3%)

Query: 15  RIDTILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           +++ +++++       +     N  L  ++ Y+L  GGK+IR  L+     + N ++   
Sbjct: 4   QMNDLINEINDALKKSIPESTLNTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQG 63

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           ++   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E  AI+AG+ LLT AFE++S
Sbjct: 64  MQSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVS 123

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
              + L D  + +++  L +  G  GM+GGQ LD+Q E   ID + +  I + KTGAL+ 
Sbjct: 124 -YDSALCDAKKVKVLQRLAYASGHLGMVGGQTLDMQSEDKKIDISTLESIHRTKTGALLT 182

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           FA  S   +A   ++    L  F ++LG++FQ+ DDLLD   D   L KK
Sbjct: 183 FAIMSAVDIADTDEHTSAMLNEFSDHLGLMFQIKDDLLDIYGDEQKLGKK 232


>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|63254579|gb|AAY35675.1| Polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 295

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  LD L       +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALDGLFKAPGPEL-----ERLYQAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|294084635|ref|YP_003551393.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664208|gb|ADE39309.1| dimethylallyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 302

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 98/240 (40%), Positives = 138/240 (57%), Gaps = 15/240 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              ++L  ++ +   +LD +      + Q+    RL+ A+RYA+L GGK++R+ LV   A
Sbjct: 3   DFTAQLATDADQCADMLDMIF-----NAQSMQAPRLVDAMRYAVLNGGKRMRAGLVLGAA 57

Query: 63  SLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L              ALRV AA+EC+H YSLIHDDLP+MD+   RRGK + HI YDE T
Sbjct: 58  RLAATESDASTYIDSRALRVAAALECLHAYSLIHDDLPAMDDADTRRGKSSCHIAYDEAT 117

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FID 173
           AI+AG+ L T AFEI++   T     +R  L+ +L    GL GM GGQMLD+Q E   + 
Sbjct: 118 AILAGDALQTLAFEILADDATHPDPAVRVALVTTLARASGLAGMAGGQMLDLQAETRTLT 177

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   +Q MKTGAL+  A   GA++  AS      +  + + LG+ FQ+ADDLLD + D
Sbjct: 178 LAETEQMQMMKTGALIVCAASCGALVGEASSTLVNAIVAYADKLGLAFQIADDLLDYDGD 237


>gi|311748420|ref|ZP_07722205.1| polyprenyl synthetase [Algoriphagus sp. PR1]
 gi|126576932|gb|EAZ81180.1| polyprenyl synthetase [Algoriphagus sp. PR1]
          Length = 328

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 12/223 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD L +   +    +    L   I Y L +GGK+IR  L      ++  N    L   
Sbjct: 9   ALLDKLEVFIQNQNFGESPKELYEPINYILNIGGKRIRPLLSLLAYGMYAENPGKILSQA 68

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           +AIE  H ++L+HDD+  MD   +RRG  TVH ++D   AI++G+ +L  A++++   + 
Sbjct: 69  SAIEVFHNFTLMHDDI--MDQAPLRRGNATVHEKWDANIAILSGDVMLVKAYDLLMETEP 126

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
            L   I          N     +  GQ  D+  E    ++E     + ++KT  L+  A 
Sbjct: 127 ALLPEI------IRLFNKTAADVCEGQQFDMNFENQDHVNEKDYLNMIRLKTAVLLGCAL 180

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + GAI+  AS +E  RL  FG N+GI FQL DDLLD   D  K
Sbjct: 181 KMGAILGGASSDEAHRLYEFGVNVGIGFQLKDDLLDVFADQEK 223


>gi|325203440|gb|ADY98893.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M01-240355]
          Length = 324

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|325276613|ref|ZP_08142352.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
 gi|324098253|gb|EGB96360.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
          Length = 295

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 13/239 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S      +R+D  L+ L +       T+  +RL +A+RY+++ GGK++R  L        
Sbjct: 4   SYQASCQRRVDAALEPLFV-----APTKELERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL +
Sbjct: 59  GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118

Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
            AF  +  P  +   D++R  ++ +L    G  GM+GGQ +D+      +D+  +  + +
Sbjct: 119 LAFSALLDPHLSPQADSVRLAMVQALATAAGPAGMVGGQAIDLGSVGLKLDQRALAFMHR 178

Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KTGAL+  +   GA+  A A Q + + L+ + + +G+ FQ+ DD+LD E D   L K+
Sbjct: 179 HKTGALIEASVRLGALASARAGQQQLDALQTYAQAIGLAFQVQDDILDVEGDTATLGKR 237


>gi|298369461|ref|ZP_06980778.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282018|gb|EFI23506.1| octaprenyl-diphosphate synthase [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 324

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 114/231 (49%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + ++   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FKQHLHEDLDKVNVVINQAV-KSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     ++   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MKILEVMADATNIIAEGEVM-QLMNIGNTDITEKQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  A+  +++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGGANPAQEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|325286587|ref|YP_004262377.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489]
 gi|324322041|gb|ADY29506.1| Geranyltranstransferase [Cellulophaga lytica DSM 7489]
          Length = 324

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 13/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ID   +  L +       +    L   I Y L LGGK++R  L    A +F  +   A+ 
Sbjct: 4   IDQYRESFLEELNKITTEKEPKNLYEPINYILQLGGKRLRPILALMTADVFETDFKKAIP 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E  H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+ ++   
Sbjct: 64  AAMAVEVFHNFSLVHDDI--MDDAPLRRGKATVHEKWDINTGILSGDAMLIEAYRLLEQY 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCF 191
             +    +          +     +  GQ  D+  E  D+    +   + + KT  L+  
Sbjct: 122 DGEQYKKLNVLF------STTALQVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVAA 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A + GAI+A  +   ++ +  FG+NLGI FQL DD LD   D PK
Sbjct: 176 AMKMGAIIAETTVENEDLIYDFGKNLGIAFQLQDDYLDAFGD-PK 219


>gi|317132180|ref|YP_004091494.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470159|gb|ADU26763.1| Polyprenyl synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 296

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 73/232 (31%), Positives = 115/232 (49%), Gaps = 10/232 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASL 64
             ++++ +KR++  L+  L             RL  A+RY A+ GGK++R  LV E   +
Sbjct: 4   SERIEDIAKRVNEALNRFLPTAEGP-----QKRLFEAMRYSAMAGGKRVRPMLVLEFCRM 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                  AL    A+E IH YSLIHDDLP MD+   RRG+P+ H+QYDE TA++AG+ LL
Sbjct: 59  CGGKEEQALPFACAVEMIHTYSLIHDDLPCMDDDDFRRGRPSCHVQYDEATALLAGDALL 118

Query: 125 TYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + AFE             ++ +R+  +L+               L  + + I    +  +
Sbjct: 119 SLAFETGLCNNMQSGVLAQNALRAMGLLAKASGGQGMVGGQMIDLLSEGQHIPLELLETM 178

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + KTGA++  A   G I+A A +   +    +   LG+ FQ+ DD+LD   
Sbjct: 179 HRGKTGAMIRAAAAGGCILAGADETRVQAADAYAAKLGLAFQIVDDILDVTG 230


>gi|295096799|emb|CBK85889.1| farnesyl-diphosphate synthase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 299

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 133/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              + LQ    R +  L   +       Q   N  L+ A+ Y ALLGGK++R FLV    
Sbjct: 2   DFSNALQARVIRANDALRRFI-----EPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F ++  T     AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 57  NMFGISDNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S  P  ++ D  R  ++  L    G+ GM GGQ LD++ E   +   Q+  
Sbjct: 117 LQTLAFSILSDAPMVEVSDRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVTLEQLER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGERGRKALPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|104779861|ref|YP_606359.1| geranyltranstransferase [Pseudomonas entomophila L48]
 gi|95108848|emb|CAK13544.1| geranyltranstransferase [Pseudomonas entomophila L48]
          Length = 295

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 82/241 (34%), Positives = 132/241 (54%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +    Q    R+D  L+ L    +  +     +RL +A+RY+++ GGK++R  L      
Sbjct: 2   IAQYQQSAQARVDAALEPLFQAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  +  P+ +   D IR Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFSALLDPRLSPQADGIRLQMVQALAKAAGPAGMVGGQAIDLGSVGVKLDQQALEYM 176

Query: 181 QKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+  A A Q + + L+ + + +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASARAEQAQLDALQVYAQAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|307943552|ref|ZP_07658896.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp.
           TrichSKD4]
 gi|307773182|gb|EFO32399.1| geranylgeranyl pyrophosphate synthetase, ic [Roseibium sp.
           TrichSKD4]
          Length = 310

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 106/233 (45%), Positives = 153/233 (65%), Gaps = 3/233 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
             L ++L   + +++  LD++L  T    +    +RLL+A+R+ AL GGK+IR  L+ E 
Sbjct: 12  SDLKTRLTTQAAKVEARLDEMLAATPLENEVARPERLLAAMRHGALNGGKRIRPVLLLET 71

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LF+ +   AL +  A+E IHCYSL+HDDLP+MD+  +RRG+PTVHI YDE TAI+AG+
Sbjct: 72  VRLFDQDDTQALDIACALEFIHCYSLVHDDLPAMDDDDLRRGQPTVHIAYDEATAILAGD 131

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFM 179
            LLT AF+++++P       I+ +L+  L    GL GM GGQMLD++ E  D  E ++  
Sbjct: 132 ALLTLAFDVVANPGLHQDARIQLRLVRELAQAAGLGGMAGGQMLDLESEHRDRSEAEIRK 191

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q MKTGAL+ F C  GAI ++A + + ER+  FGE +G+ FQLADDLLD E 
Sbjct: 192 LQSMKTGALLRFGCRGGAIFSNAREEDVERVTHFGEIIGLAFQLADDLLDVEA 244


>gi|170747046|ref|YP_001753306.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170653568|gb|ACB22623.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 323

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 98/237 (41%), Positives = 142/237 (59%), Gaps = 7/237 (2%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
                +L E +  ++T L + L       +     RL+ A+R+A+LGG K++R FL  E 
Sbjct: 21  ADFTHRLTEVAGTVETFLVERLGPAVGPGEIARPPRLMEAMRHAVLGGGKRLRPFLAIET 80

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A +   +   AL  GA +E +HCYSL+HDDLP+MD+  +RRGKPTVH  YDE TAI+ G+
Sbjct: 81  ARMLGGSEAAALAAGAGVELVHCYSLVHDDLPAMDDDDMRRGKPTVHKAYDEATAILVGD 140

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDET 175
            L T AFEI++ P  Q    +R+ L+L L    GL GM+GGQ+LD+  E       +D  
Sbjct: 141 ALQTLAFEIVADPAWQPDARVRADLVLGLARASGLGGMVGGQLLDLTAEGRFGAANMDVD 200

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               +Q MKTGA++ F+ E+GAI+  A ++++  L  +G  LG  FQ+ADD+LD E 
Sbjct: 201 DTLRMQAMKTGAILAFSVEAGAIVGGADKDQRAALLRYGLALGQAFQIADDILDREA 257


>gi|82702937|ref|YP_412503.1| farnesyltranstransferase [Nitrosospira multiformis ATCC 25196]
 gi|82411002|gb|ABB75111.1| Farnesyltranstransferase [Nitrosospira multiformis ATCC 25196]
          Length = 322

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 16/224 (7%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNH 69
             +  L+      + T   ++L S +        Y +  GGK++R  LV   A  F    
Sbjct: 4   ERIRSLIAPDMGRVDTVIREKLHSEVVLIRQVSEYIINSGGKRLRPALVILSAGAFGYTG 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                + A +E IH  +L+HDD+  +D   +RR K T +  +    +++ G+ L + AF+
Sbjct: 64  QYHYNLAAIVEFIHTATLLHDDV--VDASELRRSKATANALFGNAASVLVGDFLYSRAFQ 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++        DN+R   +L+   N   +G +  Q+L+++D  +DE     + + KT  L 
Sbjct: 122 MMVE-----VDNMRVMRVLADATNTIAEGEVL-QLLNVRDPDVDEENYLRVIRYKTAKLF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A   GAI+ +AS  E+E +  +G +LG  FQL DD+LD   D
Sbjct: 176 EAATRLGAILGNASPAEEEAMAVYGMHLGTAFQLTDDMLDYSGD 219


>gi|313496894|gb|ADR58260.1| IspA [Pseudomonas putida BIRD-1]
          Length = 295

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 79/233 (33%), Positives = 128/233 (54%), Gaps = 13/233 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
             R+D  L+ L +  +  +     +RL +A+RY+++ GGK++R  L              
Sbjct: 10  QARVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQ 64

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AF  +
Sbjct: 65  ANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSAL 124

Query: 132 SSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGAL 188
             P  +   D+IR  ++  L    G  GM+GGQ +D     + +D+  +  + + KTGAL
Sbjct: 125 LDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKTGAL 184

Query: 189 MCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +  +   GA+  A A   + + L+ + + +G+ FQ+ DD+LD E D   L K+
Sbjct: 185 IEASVRLGALASARAEPAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237


>gi|215485502|ref|YP_002327933.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
 gi|312964557|ref|ZP_07778813.1| geranyltranstransferase [Escherichia coli 2362-75]
 gi|215263574|emb|CAS07904.1| geranyltranstransferase [Escherichia coli O127:H6 str. E2348/69]
 gi|312290791|gb|EFR18668.1| geranyltranstransferase [Escherichia coli 2362-75]
 gi|315299587|gb|EFU58835.1| polyprenyl synthetase [Escherichia coli MS 16-3]
 gi|323191339|gb|EFZ76602.1| geranyltranstransferase [Escherichia coli RN587/1]
          Length = 299

 Score =  201 bits (511), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|88859185|ref|ZP_01133826.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas tunicata D2]
 gi|88819411|gb|EAR29225.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas tunicata D2]
          Length = 296

 Score =  201 bits (511), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 104/230 (45%), Positives = 140/230 (60%), Gaps = 10/230 (4%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           EN  R++ +LD LL Q         +  LL+A RY+LL GGK++R  +V     +F  N 
Sbjct: 9   ENQLRVEGVLDTLLTQ-----PMITDQTLLAASRYSLLNGGKRMRPCMVYVTGEIFGANP 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                V AAIECIH YSL+HDDLP+MD+  +RRG PT HI YDE TAI+AG+ L T+AFE
Sbjct: 64  DDLDLVAAAIECIHSYSLVHDDLPAMDDDDLRRGMPTCHIAYDEATAILAGDALQTFAFE 123

Query: 130 IISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTG 186
           I+SS K   +    +  L+ +L    GL+GM GGQ LDI   +  I+ TQ+  I ++KTG
Sbjct: 124 ILSSSKFKTINAQQQVALIANLASASGLRGMCGGQALDIAATNCAINLTQLEQIHQLKTG 183

Query: 187 ALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           AL+  A   GAI A   +    + L+ FGEN+G+ FQ+ DD+LD E D  
Sbjct: 184 ALLTSAILMGAICAPKTTPEILQNLKIFGENIGLAFQVQDDILDIEGDTA 233


>gi|325132994|gb|EGC55670.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M6190]
 gi|325136902|gb|EGC59499.1| octaprenyl-diphosphate synthase [Neisseria meningitidis M0579]
 gi|325138982|gb|EGC61531.1| octaprenyl-diphosphate synthase [Neisseria meningitidis ES14902]
          Length = 324

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++        D++R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|294635305|ref|ZP_06713803.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685]
 gi|291091314|gb|EFE23875.1| geranyltranstransferase [Edwardsiella tarda ATCC 23685]
          Length = 301

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 90/239 (37%), Positives = 127/239 (53%), Gaps = 10/239 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
                +L+   +R D  L   L       Q   +  L+ A+RY ALLGGK++R +LV   
Sbjct: 2   ATFEQQLKAYRQRADAALSQALDN-----QPFGDGPLVGAMRYGALLGGKRLRPYLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LF  +        AAIECIH YSL+HDDLP+MD+  +RRG+PT HI++ E  AI+AG+
Sbjct: 57  GRLFGCDLSALDAPAAAIECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L T AF +++ SP   + D  R  ++  L H  G+ GM GGQ LD+  E   +D   + 
Sbjct: 117 ALQTLAFTLLTDSPMPGVADRDRLCMLSELAHASGVAGMCGGQALDLAAEGQRVDLAALE 176

Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I + KTGAL+  A   GA+    A       L  +   +G+ FQ+ DD+LD   D  K
Sbjct: 177 QIHRHKTGALIRCAVRLGALAGGNAGHAALTLLDRYANAIGLAFQVQDDILDVVGDSSK 235


>gi|229916250|ref|YP_002884896.1| polyprenyl synthetase [Exiguobacterium sp. AT1b]
 gi|229467679|gb|ACQ69451.1| Polyprenyl synthetase [Exiguobacterium sp. AT1b]
          Length = 292

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 135/236 (57%), Gaps = 15/236 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L +  + ++  + +L+        ++   RL  A+ Y+L  GGK+IR  LV      + +
Sbjct: 7   LNKWKRAVELAMQELID------SSEMPKRLRDAMAYSLEAGGKRIRPALVYAVLETYGM 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V A++E +H YSLIHDDLP+MD+  +RRG+PT H Q+DE TAI+AG+ LLT A
Sbjct: 61  SLERGREVAASLEMVHTYSLIHDDLPAMDDDDLRRGRPTNHRQFDEATAILAGDALLTDA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK 184
           F I++       D    +++       G  GM+GGQ+ D+  E    +   ++  I + K
Sbjct: 121 FRILTQMPLSALD--IVEIIRIFGLAAGSSGMVGGQLDDMLAEKRNDVTLEELQSIHERK 178

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TGAL+ +A E+GAI+A AS  ++  L+ FG +LGI FQ+ DD+LD   D   + K+
Sbjct: 179 TGALLVYALEAGAILAGASVEDRMHLKQFGRHLGIAFQIQDDILDVVGDEETIGKR 234


>gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1]
 gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1]
          Length = 295

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 13/239 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +       R+D  L+ L +  +  +Q     RL +A+RY+++ GGK++R  L        
Sbjct: 4   TYQASCQARVDAALEPLFIAPSKELQ-----RLYAAMRYSVMNGGKRVRPLLAYAACEAL 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL +
Sbjct: 59  GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118

Query: 126 YAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQK 182
            AF  +  P  +   D+IR  ++  L    G  GM+GGQ +D     + +D+  +  + +
Sbjct: 119 LAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHR 178

Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KTGAL+  +   GA+  A A Q + + L+ + + +G+ FQ+ DD+LD E D   L K+
Sbjct: 179 HKTGALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237


>gi|323475387|gb|ADX85993.1| farnesyltranstransferase [Sulfolobus islandicus REY15A]
          Length = 331

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L S   +    ++  + + +      ++        ++      GGK++R  ++  
Sbjct: 1   MTDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L   +   A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG
Sbjct: 54  SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + L   AFE ++     L  +   +      ++I +  +  GQ +D+  E    + E + 
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + K KT  L   +   G I+  AS +  + L  +G NLGI FQ+ DD+L    D  
Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEK 227


>gi|307720223|ref|YP_003891363.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294]
 gi|306978316|gb|ADN08351.1| farnesyl-diphosphate synthase [Sulfurimonas autotrophica DSM 16294]
          Length = 283

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 10/222 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTA 72
           +  +  L D L  T+  +   +   L + +     GGK+ R  L+      +N     +A
Sbjct: 2   QNFEQFLLDNLP-TSKSIHPTYESALQNMLE---AGGKRFRPALLLGVVKAYNPLMLESA 57

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                A+E +H YSLIHDDLP+MD+  +RRGKPT+H+ +DEVTAI+ G+ L TY+FE+++
Sbjct: 58  RHAALAVEFLHTYSLIHDDLPAMDDSPLRRGKPTLHVSFDEVTAILVGDALNTYSFEVLA 117

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMC 190
           +      D  R +L+  L  N GL GM+ GQ +D   E        +  +   KT  L+ 
Sbjct: 118 NA--PFSDETRVKLIRELASNGGLNGMVLGQAIDCYFENKPLAVEDIKTLHTNKTAKLIA 175

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + + GA++        ++L  FG  LG++FQ+ DD+LD  +
Sbjct: 176 ASLKMGALIVGRDDA-ADKLYDFGIKLGLLFQIQDDILDVTQ 216


>gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002]
 gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002]
          Length = 293

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 11/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
                +   +R++T L+  L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWTRSVLERVETALEHYLP-----AETTEPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGARAERLDAAAAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF +++S    L    ++ L+  L    G  GM GGQ +D+      +   ++  + 
Sbjct: 118 QSQAFVVLTSD--VLGQPQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRPRLETMH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+       +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 RMKTGALLRAAVRMGALAGETPDAQALASLDAYAAAVGLAFQVVDDILDVTTDSA 230


>gi|330686046|gb|EGG97669.1| geranyltranstransferase [Staphylococcus epidermidis VCU121]
          Length = 288

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 12/229 (5%)

Query: 20  LDDLLLQTASHMQTQHNDR-----LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           ++DL+ +    ++    +      L  ++ Y+L  GGK+IR  L+     + N ++   +
Sbjct: 1   MNDLINEINDALKKSIPESTLNTNLEESMLYSLNAGGKRIRPVLLLLTLDMLNEDYRQGM 60

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +   A+E IH YSLIHDDLP+MDN   RRGK T H  Y E  AI+AG+ LL  AFE++S 
Sbjct: 61  QSALALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLPKAFELVS- 119

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
             + L D  + +++  L    G  GM+GGQ LD+Q E   ID + +  I + KTGAL+ F
Sbjct: 120 YDSALSDTKKVKVIQRLAFASGHLGMVGGQTLDMQSEDKAIDISTLESIHRTKTGALLTF 179

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           A  S   +A   ++    L  F ++LG++FQ+ DDLLD   D   L KK
Sbjct: 180 AIMSAVDIADTDEHTSAMLNEFSDHLGLMFQIKDDLLDIYGDEQKLGKK 228


>gi|255066032|ref|ZP_05317887.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256]
 gi|255049577|gb|EET45041.1| octaprenyl-diphosphate synthase [Neisseria sicca ATCC 29256]
          Length = 324

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 114/231 (49%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  R++ +++  + Q+   + +Q    ++SA      GGK++R  +    A  
Sbjct: 8   FQRHLPEDLSRVNEVINQAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAAKS 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDGDKLYALAAMVEFIHTSTLLHDDV--VDESDLRRGRETANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVDSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEAQYVQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+ +A+   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGNAAPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
          Length = 344

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 11/221 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  +  +R+ SA+RYA+L G       K+    L      L      
Sbjct: 50  SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 109

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL    A+E +H  SL+HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+  
Sbjct: 110 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 169

Query: 131 ISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTG 186
           + +       +   +  +++  L   +G  GM  GQ LD+     + E +V  +   K G
Sbjct: 170 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 229

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   +   GA++  A  +E+  LR +G  +G+++QL DD+
Sbjct: 230 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 270


>gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 342

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 11/221 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  +  +R+ SA+RYA+L G       K+    L      L      
Sbjct: 48  SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL    A+E +H  SL+HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+  
Sbjct: 108 AALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 167

Query: 131 ISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTG 186
           + +       +   +  +++  L   +G  GM  GQ LD+     + E +V  +   K G
Sbjct: 168 VIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 227

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   +   GA++  A  +E+  LR +G  +G+++QL DD+
Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268


>gi|188590181|ref|YP_001921548.1| geranyltranstransferase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500462|gb|ACD53598.1| putative geranyltranstransferase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 289

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 78/227 (34%), Positives = 124/227 (54%), Gaps = 12/227 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ID  L    +   S     +N  +  +  Y++ +GGK+IR  L+    SL+  N    + 
Sbjct: 10  IDEYLKKYFINRNS-----YNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEKIMP 64

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + AAIE IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+ LL  A  ++   
Sbjct: 65  IAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKS 124

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L ++        ++   G +GM+GGQ++D+  E   I + ++  + + KTG L+  +
Sbjct: 125 SLELGESALKAS-YEISKAAGPEGMIGGQVVDVLSEVREISKEELEYMHEKKTGELIRVS 183

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             +G I+A+    + E L  +G+ LG+ FQ+ DD+LD    EE L K
Sbjct: 184 IVAGGILANVPSGDIEALNEYGKKLGLAFQIKDDILDVIGTEETLGK 230


>gi|83854856|ref|ZP_00948386.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
 gi|83842699|gb|EAP81866.1| decaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
          Length = 332

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 16/232 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             + + L  +   ++ ++ D        M ++H  R+     + +  GGK++R  L    
Sbjct: 11  DRMAAYLNADMTAVNDLIRD-------RMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAA 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+
Sbjct: 64  ARLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   +F++++       +N+R   +L+       +G +  Q+   Q+   DE     + 
Sbjct: 122 YLFARSFQLMTET-----NNMRVLAILANASATIAEGEVL-QLTAAQNLATDEGIYLQVV 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KT AL   A + G ++A A   + + L  +G+ LGI FQ+ DDLLD + D
Sbjct: 176 RGKTAALFSAATQVGGVIAAAPDAQVQALFDYGDALGIAFQIVDDLLDYQGD 227


>gi|330813965|ref|YP_004358204.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327487060|gb|AEA81465.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 338

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 17/232 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             L S  Q   + +D+ + + L        + H + +     Y +  GGK++R  L    
Sbjct: 18  EELRSAYQSEIEEVDSFIKEKL--------SSHVELIGEMSSYLIQSGGKRLRPLLTIAS 69

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + LF       +++ A +E IH  +L+HDD+  +D    RRGK T +  +    +I+ G+
Sbjct: 70  SELFGYQGDRHIKLAACVELIHNATLLHDDV--IDKSDFRRGKKTNNNLWGNKNSILTGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL   FEI+    +     +    +LS   +   QG +     + + E + E     I 
Sbjct: 128 YLLGRCFEIMVEDGS-----LEVLKLLSSVSSEIAQGEILQLQHEKEVETL-EKTYLEII 181

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             KT +L   +   G  +   S+NEKE L  FG NLGI FQ+ DD+LD   D
Sbjct: 182 GSKTSSLFAASMRVGGCINDKSKNEKEALTSFGFNLGICFQITDDILDYYSD 233


>gi|110680572|ref|YP_683579.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114]
 gi|109456688|gb|ABG32893.1| octaprenyl-diphosphate synthase [Roseobacter denitrificans OCh 114]
          Length = 333

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 14/233 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             + + L+ +   + T++ + +    +    +    L+ A      GGK++R  L    A
Sbjct: 12  DRMAAYLESDMAAVSTLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  HLCGYDGPFHINLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++    +     +R   +L+       +G +  Q+   Q+    E     + +
Sbjct: 124 LFSRSFQLMVETGS-----LRVLDILANASATIAEGEVL-QLTASQNLATTEEVYLQVVR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT AL   A E G ++A A  +    L  +G+ LGI FQ+ DDLLD + D  
Sbjct: 178 GKTAALFSAATEVGGVIAGAPDDHVAALFEYGDALGIAFQIVDDLLDFQGDAG 230


>gi|332519159|ref|ZP_08395626.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045007|gb|EGI81200.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 324

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 12/214 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
            L    +  + +    L   I Y L LGGK++R  L    A +FN ++  AL    +IE 
Sbjct: 11  FLEYLETFSKIREPKNLYQPIDYILKLGGKRLRPVLTLMTAEVFNYDYKKALDAALSIEV 70

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
            H +SL+HDD+  MD+  +RRG+ TVH ++D  TAI++G+ +L  A+++  +  +     
Sbjct: 71  FHNFSLVHDDI--MDDAPLRRGEQTVHEKWDVNTAILSGDAMLIMAYQLFENYDS----- 123

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198
            ++   L+   +     +  GQ  D+  E  D+   ++   + + KT  L+  A + GAI
Sbjct: 124 -KTFQALAKLFSKTALEVCEGQQYDVDFETRDDVTISEYLKMIEYKTAVLVGAAMKMGAI 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +A AS  +++ +  FG  LGI FQL DD LD   
Sbjct: 183 VAKASNEDQDGIYNFGRLLGIAFQLQDDYLDAFG 216


>gi|256847381|ref|ZP_05552827.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256716045|gb|EEU31020.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 287

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 12/228 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + +  K+I+  L D +    +         L ++  Y+L+ GGK++R  L       F  
Sbjct: 2   IHDYQKQINQYLSDHVENECAE------PTLATSTIYSLMAGGKRLRPALTLAICDAFQQ 55

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           + +   LR   A+E +H YSLIHDDLP+MDN  +RRG PT H ++    A +AG+GLLT 
Sbjct: 56  SINQDVLRASCAVELLHTYSLIHDDLPAMDNDDLRRGLPTNHRRFGAGMATLAGDGLLTL 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMK 184
           AF+ +S     L    R  L+  L    G  GM+ GQ +DI +E   +    + ++ + K
Sbjct: 116 AFQWLSD--NNLATTTRLSLVRELATAAGPAGMVAGQAMDIHNEGHHLALPDLQLLHEKK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           TGAL+ +A  +G I+ + +   K  L  FGE  G+ FQ+ DDL+D   
Sbjct: 174 TGALIRYAVLAGGIITNQAPETKHLLARFGEYYGLAFQIYDDLMDVVG 221


>gi|255037310|ref|YP_003087931.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950066|gb|ACT94766.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
          Length = 324

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 71/223 (31%), Positives = 115/223 (51%), Gaps = 12/223 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           ++L+ L  +   H        L   I Y + LGGK+ R  L    AS+F+ +   A++  
Sbjct: 6   SLLEKLQTEFDRHSYGDAPVELYEPISYIMSLGGKRFRPLLTLLAASIFDTDIDKAIKPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E  H ++L+HDD+  MD   +RRG PTVH ++D  TAI++G+ +L  A++++     
Sbjct: 66  MAVEVFHNFTLMHDDI--MDRAPLRRGMPTVHEKWDANTAILSGDVMLIRAYDLLLDIPK 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
           +   ++ ++   +         +  GQ LD+  E    + E +   + ++KT  L+ FA 
Sbjct: 124 EQLRSVLARFNRTAAE------VCEGQQLDMNFEKRWDVTEAEYIGMIRLKTSVLLGFAL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           E G I+A A     + L   GEN+GI FQL DDLLD   D  K
Sbjct: 178 ELGGIIAGADDETVQLLYSAGENMGIGFQLKDDLLDVYGDPAK 220


>gi|83941379|ref|ZP_00953841.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
 gi|83847199|gb|EAP85074.1| decaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
          Length = 332

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 16/232 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             + + L  +   ++ ++ D        M ++H  R+     + +  GGK++R  L    
Sbjct: 11  DRMAAYLNADMTAVNDLIRD-------RMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAA 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+
Sbjct: 64  ARLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   +F++++       +N+R   +L+       +G +  Q+   Q+   DE     + 
Sbjct: 122 YLFARSFQLMTET-----NNMRVLAILANASATIAEGEVL-QLTAAQNLATDEGIYLQVV 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KT AL   A + G ++A A   + + L  +G+ LGI FQ+ DDLLD + D
Sbjct: 176 RGKTAALFSAATQVGGVIATAPDAQVQALYDYGDALGIAFQIVDDLLDYQGD 227


>gi|323478112|gb|ADX83350.1| Farnesyltranstransferase [Sulfolobus islandicus HVE10/4]
          Length = 331

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L S   +    ++  + + +      ++        ++      GGK++R  ++  
Sbjct: 1   MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L   +   A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG
Sbjct: 54  SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + L   AFE ++     L  +   +      ++I +  +  GQ +D+  E    + E + 
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + K KT  L   +   G I+  AS +  + L  +G NLGI FQ+ DD+L    D  
Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEK 227


>gi|224588345|gb|ACN58969.1| octaprenyl diphosphate synthase [uncultured bacterium BLR10]
          Length = 348

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 15/230 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            +   +  +   ++T++   L    S +  Q  + ++SA      GGK+IR  LV   A+
Sbjct: 31  NIAHTIAADMDAVNTVIRRKLHSEVS-LVNQIAEYIISA------GGKRIRPVLVLLVAN 83

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            ++        + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L
Sbjct: 84  AYSYKGTAHHELAAVVEFIHTATLLHDDV--VDESSLRRGRATANALFGNAASVLVGDFL 141

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++        +N+R   +LS   N+  +G +  Q+L++ D  + + +   + + 
Sbjct: 142 YSRAFQMMVGL-----NNMRVMQILSDATNVIAEGEVL-QLLNMHDPDVSQERYLQVIRS 195

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT  L   A E GA+++ A+  + E    +G +LG  FQL DD+LD   D
Sbjct: 196 KTAKLFEAAAELGALVSGANDAQIEAAGEYGRSLGTAFQLIDDVLDYAGD 245


>gi|163745677|ref|ZP_02153037.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45]
 gi|161382495|gb|EDQ06904.1| octaprenyl-diphosphate synthase [Oceanibulbus indolifex HEL-45]
          Length = 334

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 14/233 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             + + L ++ + +  ++ + +    +    +    L+ A      GGK++R  L    A
Sbjct: 13  DQMAAYLADDMQAVSALIRERMASKHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 67  RMCGYGGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDY 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +F++++ P +     +    +LS       +G +  Q+   Q+   DE     + +
Sbjct: 125 LFARSFQLMTEPGS-----MPVMRILSNAAATIAEGEVL-QLTAAQNLATDEAVYLQVVR 178

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT AL   A E G ++A AS ++ + L  +G+ LGI FQ+ DDLLD + D  
Sbjct: 179 GKTAALFSAATEVGGVIAGASTDQVKALYDYGDALGIAFQIVDDLLDYQGDTG 231


>gi|163753596|ref|ZP_02160719.1| putative isoprenyl synthetase [Kordia algicida OT-1]
 gi|161325810|gb|EDP97136.1| putative isoprenyl synthetase [Kordia algicida OT-1]
          Length = 324

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 12/223 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
            I    D  +      +       L   I Y L LGGK++R  L    A +F  +   AL
Sbjct: 3   HIAHYRDTFISYLEEKVTVSEPKNLYEPIIYILQLGGKRLRPVLTLMTAEIFGASPQKAL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E  H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++  +
Sbjct: 63  DAALAVEVFHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLILAYQLFEN 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            K       ++   L+   +     +  GQ  DI  E  ++    +   + + KT  L+ 
Sbjct: 121 YKG------KTFRALAELFSKTAIEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLVG 174

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A + GA++A AS+ + + +  FG  LG+ FQL DD LD   D
Sbjct: 175 AAMKMGALVAEASEKDAQGIYDFGRYLGLAFQLQDDYLDAYGD 217


>gi|332307431|ref|YP_004435282.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174760|gb|AEE24014.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 296

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 6/232 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
                KR+   +D LL    S +  +H  RL  A++YALL GGK++R FLV        V
Sbjct: 3   FDTQQKRVHQRVDALLQAQISDLD-EHAPRLKKAMQYALLMGGKRMRPFLVYAVGEALGV 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +         AIECIH YSL+HDDLP+MD+  +RRG PT HIQ+DE  AI+AG+ L T A
Sbjct: 62  SESDLDAPALAIECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLA 121

Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           F+I+ + P +   +  R +L+  L+   G  GM GGQ +D+Q     I + Q+  +   K
Sbjct: 122 FDIVVNYPLSDFANQQRIELVRILSRASGYDGMCGGQGIDLQSTNTLISQRQLEQLHSKK 181

Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           TGAL+  A +  A ++   S   K  L  + + +G+ FQ+ DD+LD   D  
Sbjct: 182 TGALIIAAVKMAATLSTSVSDESKALLSQYAKTIGLAFQVQDDILDVVGDSK 233


>gi|254464181|ref|ZP_05077592.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I]
 gi|206685089|gb|EDZ45571.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium Y4I]
          Length = 328

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 115/232 (49%), Gaps = 16/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L +  + ++ ++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 9   LAATLSQELEAVNVLI-------RTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +        +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 62  MCGYEGDHHVKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGDYL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +F+++   ++     +R   +L+       +G +  QM    +   DE     + + 
Sbjct: 120 FARSFQLMVETES-----LRVLDILANASATIAEGEVL-QMTAASNLKTDEGIYLQVVRG 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT AL   A E G ++A A + + + L  +G+ LGI FQ+ADDLLD + D  
Sbjct: 174 KTAALFSAATEVGGVIAGAPETQVKALFEYGDALGIAFQIADDLLDYQGDSK 225


>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
 gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
          Length = 297

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 10/232 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
               +     R ++ L   L             RL  A+RYA L GGK++R  L      
Sbjct: 6   FAEWMAVTQDRAESALGRFLP-----GPDCIPARLHEAMRYATLGGGKRVRPLLAHAAGE 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L          VG A+E IH YSL+HDDLP MD+  +RRG+PT H+++DE TA++ G+ L
Sbjct: 61  LTGATPEALDIVGCAVEMIHAYSLVHDDLPCMDDDVLRRGRPTCHVEFDEPTALLVGDSL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T AFE+++S     +   + +++  L H  G +GM GGQ +D+      + + ++ ++ 
Sbjct: 121 QTMAFELLASQPLG-EPKQQLEIIALLAHASGSRGMAGGQAIDLASVGKPLTQPELELMH 179

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +KTGAL+  A   GA+     S +E+  L  F +  G++FQ+ DD+LDC  
Sbjct: 180 ALKTGALIRAAVLLGALAGQPLSADERTSLDRFAKRAGLLFQVVDDILDCTA 231


>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
           12885]
 gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
           12885]
          Length = 308

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/218 (34%), Positives = 109/218 (50%), Gaps = 8/218 (3%)

Query: 26  QTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAIEC 81
           +           R+  A+RY AL GGK +R  LV   A              R  AA+E 
Sbjct: 28  EEVLPGPDVPPARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVEL 87

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKD 140
           +H YSLIHDDLP+MD+  +RRG+P  H+ + E  AI+AG+ LLT AFE+++  P+     
Sbjct: 88  VHTYSLIHDDLPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADP 147

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGA 197
            +   +   L    G  G++GGQ+ D   +Q   +D  ++  I + KTGAL       GA
Sbjct: 148 AVALAVAEELARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGA 207

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +A A + E E L  +    G  FQ+ DD+LD   D  
Sbjct: 208 RLAGAGEGELEALTAYATAFGEAFQIVDDILDVTGDEA 245


>gi|88193100|pdb|2FOR|A Chain A, Crystal Structure Of The Shigella Flexneri Farnesyl
           Pyrophosphate Synthase Complex With An Isopentenyl
           Pyrophosphate
 gi|88193101|pdb|2FOR|B Chain B, Crystal Structure Of The Shigella Flexneri Farnesyl
           Pyrophosphate Synthase Complex With An Isopentenyl
           Pyrophosphate
          Length = 323

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 26  DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 80

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 81  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 140

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 141 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 200

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 201 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 260

Query: 236 KK 237
           K+
Sbjct: 261 KR 262


>gi|160871987|ref|ZP_02062119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Rickettsiella grylli]
 gi|159120786|gb|EDP46124.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Rickettsiella grylli]
          Length = 294

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 75/223 (33%), Positives = 113/223 (50%), Gaps = 12/223 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
              RI+ +L   L           +  L  A+ YA+L GGK++R   V    ++  ++  
Sbjct: 8   YQNRINGLLKQCLSN-----PPPLSKPLYDAMIYAVLNGGKRLRPLYVYTLGNVLGLSLQ 62

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +  AIE IH YSLIHDDLP MDN   RRGKP+ H Q+ E  A++AG+ L   AF+ 
Sbjct: 63  DLDHIACAIEFIHAYSLIHDDLPCMDNDDWRRGKPSCHKQFGEAMALLAGDALQALAFDT 122

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTG 186
           +   K   +     +++  LT  +G QGM+ GQ +D +D       D +    I  +KTG
Sbjct: 123 L--LKAPFQSLKVIKMLSVLTEAVGAQGMVAGQAMDFKDFNALGRSDRSNAENIHALKTG 180

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +L   A +  AI A   Q+    L+  G  +G++FQ+ DD+ D
Sbjct: 181 SLFGAAFQLPAIAADLPQDHSLTLKNVGHQVGLVFQIQDDICD 223


>gi|260583700|ref|ZP_05851448.1| geranyltranstransferase [Granulicatella elegans ATCC 700633]
 gi|260158326|gb|EEW93394.1| geranyltranstransferase [Granulicatella elegans ATCC 700633]
          Length = 294

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 91/239 (38%), Positives = 122/239 (51%), Gaps = 14/239 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M+  +    QE    + T +D++            + RL  A+ YA   GGK+IR  LV 
Sbjct: 1   MSEMISYWQQEIENYLLTRIDEI---------PNISTRLKEAMLYACSSGGKRIRPLLVL 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             + L  V     L V A++E IH YSLIHDDLP MDN   RRGK TVH Q+DE TAI+A
Sbjct: 52  LISHLEEVELQKVLPVAASLEMIHTYSLIHDDLPGMDNDDYRRGKLTVHKQFDEATAILA 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT  FE ++    QL D  + + +  L    G  GM+ GQM DI  E   I   Q+
Sbjct: 112 GDALLTLTFEELAQC--QLSDAKKVRAIQVLGSASGASGMITGQMRDIASEHQEITLEQL 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I   KTG L+  A   G ++   +   +E L  FG + G+ FQ+ +DL D   D  K
Sbjct: 170 KQIHADKTGQLLLAAIRLGLLVLEDATPYEEALLKFGVHFGLAFQIQNDLQDVCWDSEK 228


>gi|315223793|ref|ZP_07865642.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
 gi|314946239|gb|EFS98239.1| polyprenyl synthetase [Capnocytophaga ochracea F0287]
          Length = 321

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 14/228 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I+      L         +    L   I+Y L LGGK+IR  L     ++F  ++  AL 
Sbjct: 4   IEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPILTLIATNIFGKDYRKALN 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE  H +SLIHDD+  MDN  +RRGKPTVH ++D    I++G+ +L  A++++   
Sbjct: 64  AATAIEVFHNFSLIHDDI--MDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDC 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191
            +++         L  T +     +  GQ +D+  E + E        +   KT  L+  
Sbjct: 122 PSKIFQE------LVKTLSETALKVCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGA 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
           A + G+I++  ++  +  +  FG NLGI FQL DD LD   D    KK
Sbjct: 176 ALQMGSIISETTKENQINMYNFGLNLGIAFQLQDDYLDTFGDASFGKK 223


>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
 gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
          Length = 371

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/249 (30%), Positives = 128/249 (51%), Gaps = 21/249 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + E +  ++  LD      A+    +    L  A+RYALL GGK++R  L    
Sbjct: 69  FDFKAYMGERAVAVNRALD------AAIPAGEPPAALHDAMRYALLAGGKRVRPALCLAA 122

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            ++       A+   AA+E +H  SL+HDDLP MD+  +RRGKPT H+ Y E  A++AG+
Sbjct: 123 CAVVGGPEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGD 182

Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            LL+ +F  ++S  +   D           + +  L   IG +G++ GQ++D++     E
Sbjct: 183 ALLSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSE 242

Query: 175 ----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                ++  I   KT AL+  +   GAI+   +  + ERLR +  ++G++FQ+ DD+LD 
Sbjct: 243 PVPLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDV 302

Query: 231 E---EDLPK 236
               E+L K
Sbjct: 303 TKSSEELGK 311


>gi|227828317|ref|YP_002830097.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25]
 gi|229585547|ref|YP_002844049.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27]
 gi|227460113|gb|ACP38799.1| Farnesyltranstransferase [Sulfolobus islandicus M.14.25]
 gi|228020597|gb|ACP56004.1| Farnesyltranstransferase [Sulfolobus islandicus M.16.27]
          Length = 331

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 14/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L S   +    ++  + + +      ++        ++      GGK++R  ++  
Sbjct: 1   MSDELSSYFNDIVNNVNFHIKNFVKSNVRTLEE-------ASFHLFTAGGKRLRPLILVS 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L   +   A +  AA+E +H ++L+HDD+  MD  Y+RRG PTVH+++ E  AI+AG
Sbjct: 54  SSDLIGGDRQRAYKAAAAVEILHNFTLVHDDI--MDRDYLRRGLPTVHVKWGEPMAILAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + L   AFE ++     L  +   +      ++I +  +  GQ +D+  E    + E + 
Sbjct: 112 DYLHAKAFEALNEALKGLDGDTFYKAFSIFINSIEI--ISEGQAMDMSFENRVDVTEEEY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + K KT  L   +   G I+  AS +  + L  +G NLGI FQ+ DD+L    D  
Sbjct: 170 VQMIKGKTAMLFSCSAALGGIINKASDDIIKNLIEYGLNLGISFQIVDDILGIIGDEK 227


>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
 gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
 gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 366

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + E +  ++  LD      AS    +    L  A+RYALL GGK++R  L    
Sbjct: 64  FDFNAYMGEKAAAVNRALD------ASIPADEPPAALHEAMRYALLAGGKRVRPALCLAA 117

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            ++       A+   AA+E +H  SL+HDDLP MD+  +RRGKPT H+ Y E  A++ G+
Sbjct: 118 CAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGD 177

Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQD----E 170
            LL+ +F  ++   +   D           + +  L   IG +G++ GQ++D++     E
Sbjct: 178 ALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 237

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +   ++  I   KT AL+  +   GAI+   S  + E LR +  ++G++FQ+ DD+LD 
Sbjct: 238 TVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV 297

Query: 231 E---EDLPK 236
               E+L K
Sbjct: 298 TKSSEELGK 306


>gi|319761830|ref|YP_004125767.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
 gi|317116391|gb|ADU98879.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
          Length = 297

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 2/218 (0%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           L  +    +  ++      L +A+RYA+L GGK++R  LV             ALR   A
Sbjct: 16  LAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALRAACA 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQ 137
           +E IH YSL+HDD+P MDN  +RRGKPTVH+++ +  A++AG+ L   AFE+++      
Sbjct: 76  VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVP 135

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                R   +L+               L    + + + Q+  + ++KTGAL+  +   GA
Sbjct: 136 PAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGA 195

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                +   ++ L  +G  +G+ FQ+ DD+LD  +D  
Sbjct: 196 ACGEPAGVAEQALAQYGAAIGLAFQVVDDVLDVTQDSA 233


>gi|251777602|ref|ZP_04820522.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243081917|gb|EES47807.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 289

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/227 (33%), Positives = 129/227 (56%), Gaps = 8/227 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           +  ++D+ L +   + +  +N  +  +  Y++ +GGK+IR  L+    SL+  N    + 
Sbjct: 6   LKNVIDEYLKKYFIN-RNSYNKTVYESAGYSVNIGGKRIRPTLLILTYSLYKDNIEKIMP 64

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + AAIE IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+ LL  A  ++   
Sbjct: 65  MAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKS 124

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L ++   +    ++   G +GM+GGQ++D+  E   I + ++  + + KTG L+  +
Sbjct: 125 SLELGESAL-RASYEISKAAGPEGMIGGQIVDVLSEVREISKEELEYMHEKKTGELIRVS 183

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             +G I+A+    + E L  +G+ LG+ FQ+ DD+LD    EE L K
Sbjct: 184 IVAGGILANVPSGDIEALNEYGKKLGLAFQIKDDILDVIGTEETLGK 230


>gi|121635537|ref|YP_975782.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18]
 gi|120867243|emb|CAM11012.1| octaprenyl-diphosphate synthase [Neisseria meningitidis FAM18]
          Length = 324

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDGKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++        D++R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVD-----SDSMRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   +  L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|284162658|ref|YP_003401281.1| dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
 gi|284012655|gb|ADB58608.1| Dimethylallyltranstransferase [Archaeoglobus profundus DSM 5631]
          Length = 327

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 18/229 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           ++++ S+ I+  ++D L            + L  A  + +  GGK++R  L         
Sbjct: 14  EIKKRSEVINKAMEDFL-------DLGEPEELYKASYHLIKAGGKRLRPVLTLLSCEAIG 66

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    L    AIE IH ++LIHDD+  MD    RRG PTVH  + E TAI+AG+ L   
Sbjct: 67  RDWKPILPSAIAIELIHNFTLIHDDI--MDKDEYRRGVPTVHRLFGEATAILAGDTLFAK 124

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKM 183
           AFEI+S    + ++ IR+  +++         +  GQ +D++ E  D+        + + 
Sbjct: 125 AFEILSKCNVEAENVIRAVEVIADV----CVKICEGQYMDMEFEKRDDVSVEDYLKMVEK 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L+  +C   A++    +   + L  FG N GI FQ+ DD+LD   
Sbjct: 181 KTGVLIACSCSIPAVLYG-EEKYVKPLWDFGLNCGIGFQIHDDVLDLVG 228


>gi|327482340|gb|AEA85650.1| geranyltranstransferase [Pseudomonas stutzeri DSM 4166]
          Length = 295

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/228 (33%), Positives = 126/228 (55%), Gaps = 10/228 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
            +R+D  L+ L +     +     +RL  A+RY+++ GGK++R  LV       N +   
Sbjct: 10  QQRVDGCLEALFVPPLPQL-----ERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTD 64

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AFE +
Sbjct: 65  ADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAM 124

Query: 132 SSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           +  +   +D  +R ++   L    G  GM+GGQ +D+      +D   + ++ + KTGAL
Sbjct: 125 AQAEHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGAL 184

Query: 189 MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + + GA+ +  A  +    L  +   +G+ FQ+ DD+LD E D  
Sbjct: 185 IEASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESDTA 232


>gi|300937031|ref|ZP_07151897.1| polyprenyl synthetase [Escherichia coli MS 21-1]
 gi|300457862|gb|EFK21355.1| polyprenyl synthetase [Escherichia coli MS 21-1]
          Length = 299

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLEALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|260912495|ref|ZP_05919030.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633374|gb|EEX51529.1| polyprenyl synthetase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 324

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D IL  +     +    +    L   IRY L +GGK+IR  L     +LF  +  + L  
Sbjct: 5   DIILSKINDYIEALPFNRKPQSLYEPIRYVLSIGGKRIRPTLALLAYNLFKDDPESILAP 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E  H Y+L+HDDL  MDN  +RRG PTVH ++D  TAI++G+ +L  A+++++   
Sbjct: 65  ACGLETYHNYTLLHDDL--MDNAALRRGMPTVHKRWDANTAILSGDSMLVLAYQLVAQC- 121

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
               D+ + + ++ L     L  +  GQ  D+  E    + E +   + ++KT  L+   
Sbjct: 122 ----DSSKLKPVMELFTETAL-EIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSVLLACG 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + GA++A A Q + + L  FGE +G+ FQL DD LD   D  
Sbjct: 177 MKMGALLADAPQQDADLLYKFGEQIGLAFQLQDDFLDVYGDSK 219


>gi|241206841|ref|YP_002977937.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860731|gb|ACS58398.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 304

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 117/236 (49%), Positives = 164/236 (69%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N++ I+ +LD LL  +A   +    + L  A+ YA+L GGK++R FLV E 
Sbjct: 6   DTFETRLKNNARDIEALLDALLSPSALSDEIARPETLRDAMHYAVLNGGKRLRPFLVVES 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   ALRVGAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+
Sbjct: 66  AALLGGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLTYAF+II++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  
Sbjct: 126 SLLTYAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GA++A +   ++ RLR FGE +G+ FQLADD+LD   D  
Sbjct: 186 LQAMKTGALIRFACEAGAVIAASRPEDRRRLRAFGEKIGLAFQLADDILDLTSDAA 241


>gi|26246427|ref|NP_752466.1| geranyltranstransferase [Escherichia coli CFT073]
 gi|227884571|ref|ZP_04002376.1| geranyltranstransferase [Escherichia coli 83972]
 gi|300988027|ref|ZP_07178507.1| polyprenyl synthetase [Escherichia coli MS 45-1]
 gi|301049622|ref|ZP_07196573.1| polyprenyl synthetase [Escherichia coli MS 185-1]
 gi|26106825|gb|AAN79010.1|AE016756_193 Geranyltranstransferase [Escherichia coli CFT073]
 gi|227838657|gb|EEJ49123.1| geranyltranstransferase [Escherichia coli 83972]
 gi|300298615|gb|EFJ55000.1| polyprenyl synthetase [Escherichia coli MS 185-1]
 gi|300407579|gb|EFJ91117.1| polyprenyl synthetase [Escherichia coli MS 45-1]
 gi|307552326|gb|ADN45101.1| geranyltranstransferase [Escherichia coli ABU 83972]
 gi|315294200|gb|EFU53551.1| polyprenyl synthetase [Escherichia coli MS 153-1]
          Length = 299

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSINTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
 gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
          Length = 294

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +     +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231


>gi|313683408|ref|YP_004061146.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994]
 gi|313156268|gb|ADR34946.1| farnesyl-diphosphate synthase [Sulfuricurvum kujiense DSM 16994]
          Length = 282

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/222 (37%), Positives = 125/222 (56%), Gaps = 10/222 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTA 72
           ++ +T L   L  +A      + + L   +   + GGK+ R  L+      +N     +A
Sbjct: 2   EQFETFLGSHLP-SAPSFHPHYENSLRQML---IGGGKRFRPALLLGVVRAYNPLLIQSA 57

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                AIE +H YSLIHDDLP+MDN  +RRG PT+H  YDEV+AI+AG+ L TYAFE++S
Sbjct: 58  YHAALAIELLHTYSLIHDDLPAMDNADLRRGIPTLHKTYDEVSAILAGDALNTYAFEVLS 117

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMC 190
           +      D +  +L+ SL HN G +GM+ GQ +D   E   ++  QV M+   KTG L+ 
Sbjct: 118 NA--PFADRVIVKLIRSLAHNGGAEGMVLGQAIDCHFENFRLELDQVKMLHIHKTGKLIA 175

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A + GA +       +E L  FG +LG++FQ+ DD+LD  +
Sbjct: 176 AALQMGAFIVGRDDMAQE-LYDFGIDLGLLFQIQDDILDVTQ 216


>gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 295

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEGLFQPPSPELS-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|295688780|ref|YP_003592473.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756]
 gi|295430683|gb|ADG09855.1| Polyprenyl synthetase [Caulobacter segnis ATCC 21756]
          Length = 299

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 100/233 (42%), Positives = 143/233 (61%), Gaps = 6/233 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
            L  ++ + +  +   LD+LL +           RL  A+RYA LG GK++R F   E  
Sbjct: 8   DLARRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRPFFALETG 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F++     LR   A+ECIH YSL+HDDLP+MD+  +RRG+PTVH QYDE TAI+AG+ 
Sbjct: 63  KMFDLAERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHKQYDEATAILAGDA 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T AFEI++ P T    +IRS+L+  L    G +GM+GGQM+DI     D   V  +Q+
Sbjct: 123 LQTAAFEIMAHPDTHDDAHIRSELVRKLAIASGARGMVGGQMIDILGVRDDLGAVARMQR 182

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +KTGAL+ FA E   I+A A ++E+  L  F ++LG+ +Q+ DD+LD E D  
Sbjct: 183 LKTGALIAFAFEIPLIIARAKESERHALMAFAQDLGLAYQIVDDILDAEGDEK 235


>gi|255534882|ref|YP_003095253.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341078|gb|ACU07191.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
           3519-10]
          Length = 323

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 22/236 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E  + +   ++    +            L   + Y +  GGK++R  +V     +F  
Sbjct: 4   LEEYQEIVTKAVEKYTFKDK-------PTELYDPMNYIISHGGKRLRPIMVLMANDMFGG 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A++   AIE  H ++LIHDD+  MD   +RR KPT+H  +     I++G+ LL  +
Sbjct: 57  DIQKAIKPALAIEFFHNFTLIHDDI--MDEAPLRRNKPTIHTLHGLNAGILSGDALLLKS 114

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMK 184
           ++        L+  +    +   TH   L  +  GQ  DI  E + +        +   K
Sbjct: 115 YKFF----EDLEPELFKACIRVFTHTGLL--LCEGQQYDINFETLGDVTFNDYIRMITYK 168

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           TG L   + E GA++A +   + + +  FG+NLGI FQ+ DD LD   D     KK
Sbjct: 169 TGVLTASSFEIGALIAGSDFKDAKAIFNFGKNLGIAFQIMDDYLDVFGDQEQFGKK 224


>gi|320197141|gb|EFW71758.1| geranyltranstransferase [Escherichia coli WV_060327]
          Length = 299

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  L+  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPLVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F+V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFDVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|281177591|dbj|BAI53921.1| geranyltranstransferase [Escherichia coli SE15]
          Length = 299

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
 gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
          Length = 294

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +     +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDVDA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231


>gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619]
 gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619]
          Length = 295

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/239 (33%), Positives = 131/239 (54%), Gaps = 13/239 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +    +  R+D  L+ L +       T+  +RL +A+RY+++ GGK++R  L        
Sbjct: 4   AYQASSQARVDAALEPLFI-----APTKELERLYAAMRYSVMNGGKRVRPLLAYAACQAL 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL +
Sbjct: 59  GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118

Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
            AF  +  P+ +   D IR  ++ +L    G  GM+ GQ +D+      +D+  +  + +
Sbjct: 119 LAFSALLDPRLSPQPDAIRLAMVQALAKAAGPAGMVAGQAIDLGSVGVKLDQQALEFMHR 178

Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KTGAL+  +   GA+ +  A Q + + L+ + + +G+ FQ+ DD+LD E D   L K+
Sbjct: 179 HKTGALIEASVRLGALASGRAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237


>gi|26987266|ref|NP_742691.1| polyprenyl synthetase [Pseudomonas putida KT2440]
 gi|24981909|gb|AAN66155.1|AE016243_7 geranyltranstransferase [Pseudomonas putida KT2440]
          Length = 295

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 13/239 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +       R+D  L+ L +  +  +     +RL +A+RY+++ GGK++R  L        
Sbjct: 4   TYQASCQARVDAALEPLFIAPSKEL-----ERLYAAMRYSVMNGGKRVRPLLAYAACEAL 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL +
Sbjct: 59  GAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQS 118

Query: 126 YAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQK 182
            AF  +  P  +   D+IR  ++  L    G  GM+GGQ +D     + +D+  +  + +
Sbjct: 119 LAFSALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHR 178

Query: 183 MKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KTGAL+  +   GA+  A A   + + L+ + + +G+ FQ+ DD+LD E D   L K+
Sbjct: 179 HKTGALIEASVRLGALASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237


>gi|116327487|ref|YP_797207.1| geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120231|gb|ABJ78274.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 313

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/224 (36%), Positives = 123/224 (54%), Gaps = 14/224 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L  QT S +  Q    L  A++Y+L  GGK++R  LV              L +G+++EC
Sbjct: 21  LNSQTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAAFGGSQNETRNTLLLGSSLEC 80

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLPSMDN   RRG PT+H ++ E TAI+ G+ L ++AF  IS  +   +D 
Sbjct: 81  IHTYSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGDALNSFAFYFISLIQGDNEDY 140

Query: 142 IRSQLMLSLTH-NIGLQGMLGGQMLDIQDEF---------IDETQVFMI---QKMKTGAL 188
              + +L + H   G  GM+ GQ+ D+Q E           ++ +V M+    ++KTGAL
Sbjct: 141 FLHRDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSKSEQEKVAMVQLTHRLKTGAL 200

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  A   G  +    +  +  L  +GE+LG++FQ+ DD+LD E 
Sbjct: 201 IKAALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDILDVEG 244


>gi|238022838|ref|ZP_04603264.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147]
 gi|237866041|gb|EEP67177.1| hypothetical protein GCWU000324_02755 [Kingella oralis ATCC 51147]
          Length = 295

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 123/237 (51%), Gaps = 11/237 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN    +  +      + +L  +L +TA          L  A+RYA L GGK++R  LV 
Sbjct: 1   MN-DFVTWQKTAQAHTEAVLQQMLPETALA-----PQGLHEAMRYAALDGGKRLRPMLVL 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L N          AA+ECIH YSL+HDD+P MDN  +RRGKPT H+ Y   TA++ 
Sbjct: 55  AAAELGNRVQAACEAALAAVECIHVYSLVHDDMPEMDNDTLRRGKPTCHVAYGAATALLV 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177
           G+ L T AFE++S  +T L    + +++  L    G  GM GGQ +D+ +    + +  +
Sbjct: 115 GDALQTLAFELLSR-QTDLPAARQLRMLNVLARASGSTGMAGGQAIDLANVGHDLPQDAL 173

Query: 178 FMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  +KTGAL+  A + GA+      +     L  +   LG+ FQ+ DD+LDC  D
Sbjct: 174 EQMHSLKTGALIRAAVQLGALSCPDVDEAALAALDEYAAKLGLAFQVIDDVLDCAAD 230


>gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
 gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
          Length = 294

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +     +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDGDA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGDPPSAETLAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|51891328|ref|YP_074019.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51855017|dbj|BAD39175.1| polyprenyl synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 331

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 15/232 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + S + ++ ++++T ++  L    + ++      L S       GGK+IR  LV   + 
Sbjct: 14  DVFSSIADDLRQVETAIEAALSTQETMLEEVSTHLLRS-------GGKRIRPALVILASR 66

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              V     + V  A+E IH  +L+HDD+  +DN  +RRG+PTV+  ++   +++ G+ L
Sbjct: 67  FPGVELKQVIDVAVAVELIHMATLVHDDV--VDNADLRRGRPTVNALWNNQVSVLTGDYL 124

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              AF +++         + S+++  ++           QM    D    E   +     
Sbjct: 125 FAKAFTLLADTGNNRVVRLMSEVVREMSQGELA------QMASYFDVEQTEEDYYRRIAR 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KTG L+  AC  GA+MA   + + + +  +G  +G+ FQ+ADDLLD   D  
Sbjct: 179 KTGYLIAEACRLGAVMAGVGEEQVQAVYDYGMGVGLSFQIADDLLDFFGDEE 230


>gi|293418488|ref|ZP_06660923.1| geranyltranstransferase [Escherichia coli B088]
 gi|291325016|gb|EFE64431.1| geranyltranstransferase [Escherichia coli B088]
 gi|323184753|gb|EFZ70124.1| geranyltranstransferase [Escherichia coli 1357]
          Length = 299

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTVTLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|254512243|ref|ZP_05124310.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
           KLH11]
 gi|221535954|gb|EEE38942.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
           KLH11]
          Length = 332

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 10/237 (4%)

Query: 1   MNGGLPSKLQEN-SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
           MN    SK  E  ++ +   ++ +     + M + H  R+     + +  GGK++R  L 
Sbjct: 1   MNVSAISKPHERLAELLAAEMEAVNGLIRTRMASDHAPRIPEVTAHLVEAGGKRLRPMLT 60

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A LF+ +    +R+ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++
Sbjct: 61  LAAAQLFDYSGDHHIRLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVL 118

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ L + +F+++    +     +R   +L+       +G +  QM    D    E    
Sbjct: 119 VGDYLFSRSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAATDLDTSEAIYL 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + + KT AL   A E G ++A AS  +   L  +G+ LGI FQ+ADDLLD + D  
Sbjct: 173 QVVRGKTAALFSAATEVGGVIAGASDEQVRALYDYGDALGIAFQIADDLLDYQGDSA 229


>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
 gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
          Length = 295

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/228 (33%), Positives = 127/228 (55%), Gaps = 10/228 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
            +R+D  L+ L +     +     +RL  A+RY+++ GGK++R  LV       N +  +
Sbjct: 10  QQRVDGCLEALFVPPLPQL-----ERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKAS 64

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL + AFE +
Sbjct: 65  ADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAM 124

Query: 132 SSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           +  +   +D  +R ++   L    G  GM+GGQ +D+      +D   + ++ + KTGAL
Sbjct: 125 AQERHNPQDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGAL 184

Query: 189 MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + + GA+ +  A  +    L  +   +G+ FQ+ DD+LD E D  
Sbjct: 185 IEASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESDTA 232


>gi|110804443|ref|YP_687963.1| geranyltranstransferase [Shigella flexneri 5 str. 8401]
 gi|110613991|gb|ABF02658.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
           flexneri 5 str. 8401]
          Length = 299

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|240017367|ref|ZP_04723907.1| IspB [Neisseria gonorrhoeae FA6140]
          Length = 324

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIRVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|229592837|ref|YP_002874956.1| geranyltranstransferase [Pseudomonas fluorescens SBW25]
 gi|229364703|emb|CAY52662.1| geranyltranstransferase [Pseudomonas fluorescens SBW25]
          Length = 295

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +    +  R++  L+ L +  +  M+     RL  A+RY+++ GGK++R  L      
Sbjct: 2   IDAYQASSQARVNAALEPLFVAPSPEMK-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGL 116

Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  +  P  + +   +R +++ +L H  G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFSALLDPALSSVNAELRLRMVTALAHAAGPAGMVGGQAIDMGSVSLKLDQQALEHM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  A   GA+ +  A   +   L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEAAVHLGALASGRAEAPQLAALKTYALAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
 gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
          Length = 294

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +     +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDVDA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLEKMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSAETLAALDVYAAAVGLAFQVVDDILDVTTDSA 231


>gi|59802000|ref|YP_208712.1| IspB [Neisseria gonorrhoeae FA 1090]
 gi|194099557|ref|YP_002002687.1| IspB [Neisseria gonorrhoeae NCCP11945]
 gi|239999762|ref|ZP_04719686.1| IspB [Neisseria gonorrhoeae 35/02]
 gi|240014919|ref|ZP_04721832.1| IspB [Neisseria gonorrhoeae DGI18]
 gi|240081510|ref|ZP_04726053.1| IspB [Neisseria gonorrhoeae FA19]
 gi|240113789|ref|ZP_04728279.1| IspB [Neisseria gonorrhoeae MS11]
 gi|240116523|ref|ZP_04730585.1| IspB [Neisseria gonorrhoeae PID18]
 gi|240118747|ref|ZP_04732809.1| IspB [Neisseria gonorrhoeae PID1]
 gi|240121989|ref|ZP_04734951.1| IspB [Neisseria gonorrhoeae PID24-1]
 gi|240124286|ref|ZP_04737242.1| IspB [Neisseria gonorrhoeae PID332]
 gi|240126497|ref|ZP_04739383.1| IspB [Neisseria gonorrhoeae SK-92-679]
 gi|240128960|ref|ZP_04741621.1| IspB [Neisseria gonorrhoeae SK-93-1035]
 gi|254494548|ref|ZP_05107719.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291]
 gi|260439720|ref|ZP_05793536.1| IspB [Neisseria gonorrhoeae DGI2]
 gi|268595575|ref|ZP_06129742.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02]
 gi|268597610|ref|ZP_06131777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19]
 gi|268599861|ref|ZP_06134028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11]
 gi|268602196|ref|ZP_06136363.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18]
 gi|268604462|ref|ZP_06138629.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1]
 gi|268682915|ref|ZP_06149777.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332]
 gi|268685081|ref|ZP_06151943.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268687344|ref|ZP_06154206.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|291042968|ref|ZP_06568706.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2]
 gi|59718895|gb|AAW90300.1| putative octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA
           1090]
 gi|193934847|gb|ACF30671.1| IspB [Neisseria gonorrhoeae NCCP11945]
 gi|226513588|gb|EEH62933.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 1291]
 gi|268548964|gb|EEZ44382.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae 35/02]
 gi|268551398|gb|EEZ46417.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae FA19]
 gi|268583992|gb|EEZ48668.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae MS11]
 gi|268586327|gb|EEZ51003.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID18]
 gi|268588593|gb|EEZ53269.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID1]
 gi|268623199|gb|EEZ55599.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae PID332]
 gi|268625365|gb|EEZ57765.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268627628|gb|EEZ60028.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|291013107|gb|EFE05076.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae DGI2]
 gi|317165053|gb|ADV08594.1| IspB [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 324

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIRVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|293398312|ref|ZP_06642503.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62]
 gi|291611236|gb|EFF40320.1| octaprenyl-diphosphate synthase [Neisseria gonorrhoeae F62]
          Length = 324

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ +  +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|332187832|ref|ZP_08389566.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
 gi|332012182|gb|EGI54253.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
          Length = 296

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 105/243 (43%), Positives = 142/243 (58%), Gaps = 11/243 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M   L   L E ++ ID     +L        +     L +A+R+A + GGK++R  LV 
Sbjct: 1   MMLSLRDALDEVAQDIDRRFAQVLADPGDPRAS-----LYAAMRHAAIGGGKRLRPLLVF 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A LF+V+   A  V  A+E IH YSLIHDDLP+MD+  +RRGKPTVH  +DE TAI+A
Sbjct: 56  ATARLFDVDRDCAGWVATALEAIHVYSLIHDDLPAMDDDDMRRGKPTVHKAFDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L   AFEI++ P T     +RS+L+L L    G  GM GGQM+D++ E    D   V
Sbjct: 116 GDCLHALAFEILADPSTHPDPFVRSELILDLARASGPSGMAGGQMMDLEAERQIFDLPTV 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--- 234
             +Q+MKTGAL+C A E+GAI+       +  LR +  +LG+ FQ+ADDLLD E D    
Sbjct: 176 TRLQQMKTGALICAAVEAGAILGRVPPEGRTHLRGYAHDLGLAFQIADDLLDAEGDEAVA 235

Query: 235 PKK 237
            KK
Sbjct: 236 GKK 238


>gi|319781104|ref|YP_004140580.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166992|gb|ADV10530.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 305

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 112/233 (48%), Positives = 154/233 (66%), Gaps = 3/233 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L   +  ++ +L  LL   A   +    DRL++A+R+  L GGK++R FLV E A
Sbjct: 8   AFEMALIRRAAAVEVLLRRLLDDRALSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESA 67

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF+ +   ALRV AA+EC+HCYSLIHDDLP+MD+  +RRG+PTVH  +DE TAI+AG+ 
Sbjct: 68  ALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDA 127

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLT AF+II+   T L    R+ L+L+L    G  GM+GGQ LD++ E    DE  +  +
Sbjct: 128 LLTLAFDIIAGESTALPAERRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIIRL 187

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           Q MKTGAL+ FACE+GA++A A  +++ERL  FG  +G+ FQLADDLLD   D
Sbjct: 188 QAMKTGALIRFACEAGALIAGAPADDRERLAEFGSAIGLAFQLADDLLDLTGD 240


>gi|254561671|ref|YP_003068766.1| geranyltranstransferase [Methylobacterium extorquens DM4]
 gi|254268949|emb|CAX24910.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Methylobacterium extorquens DM4]
          Length = 320

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 101/238 (42%), Positives = 146/238 (61%), Gaps = 7/238 (2%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
            G    +L + +  ++T L DLL  T    +     RL+ A+R+A+LGG K++R FL  E
Sbjct: 17  TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A +       AL  GA +E +HCYSL+HDDLP+MD+  +RRGKPTVH  YDE TAI+ G
Sbjct: 77  TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDE 174
           + L T AFE+ + P+ Q    IR++L+L L    GL GM+GGQ+LD+  E       +D 
Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                +Q MKTGA++ F+ E+GA++  A+ +E+  L  +G+ LG  FQ+ADD+LD E 
Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDREA 254


>gi|315229911|ref|YP_004070347.1| dimethylallyltransferase [Thermococcus barophilus MP]
 gi|315182939|gb|ADT83124.1| dimethylallyltransferase [Thermococcus barophilus MP]
          Length = 342

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 17/238 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
             L   ++E +K +D ++          +  +  + L  A R Y L GGK++R F+V   
Sbjct: 5   DALFRSIKEKAKVVDDVI-------FELLPEKEPEELYEATRHYPLAGGKRVRPFVVLTA 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A     +   AL   AAIE +H Y+LIHDD+  MD    RRG+ TVH  +    AI+AG+
Sbjct: 58  AEAVGGDWRKALYPAAAIEILHTYTLIHDDIMDMDE--TRRGRATVHKVWGINMAILAGD 115

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVF 178
            + +  F+  ++ K  +      +++ ++        +  GQ LD++ E  D     +  
Sbjct: 116 LMYSVVFD--AATKAPVSAEKIVEIVRAIARAGI--EICEGQALDLEFETRDTVTIEEYL 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   KT AL   + + G I+   +Q   + L  +G N+G+ FQ+ DD+LD   D  K
Sbjct: 172 KMIDGKTAALFDASAKIGGIIGTDNQEYIQALSKYGRNVGMAFQIWDDVLDLIADEKK 229


>gi|297619910|ref|YP_003708015.1| Dimethylallyltranstransferase [Methanococcus voltae A3]
 gi|297378887|gb|ADI37042.1| Dimethylallyltranstransferase [Methanococcus voltae A3]
          Length = 316

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/222 (33%), Positives = 111/222 (50%), Gaps = 12/222 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           + IL+ +  +   + +   N  L +A ++ LL GGK+IR +L     +L        +  
Sbjct: 4   EEILNSMSKELEKYFEKDSN--LYNASKHLLLAGGKRIRPYLSIMAYNLKKDGLDEIMAP 61

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             ++E IH Y+L+HDD+  MDN   RRGKPTVH  Y E  AI+AG+ L   AFE +S+  
Sbjct: 62  ALSVELIHNYTLVHDDI--MDNDDERRGKPTVHKVYGEPIAILAGDLLYAKAFEALSTID 119

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFAC 193
             +K + +   +LS         +  GQ  D++ E       Q   +   KTGAL+    
Sbjct: 120 DSIKAH-KVLKILSKA----CVEVCEGQTDDMEFETTFPTMEQYVNMISKKTGALIEAPI 174

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAIMA  +  E E L  + + +GI FQ+ DD+LD   D  
Sbjct: 175 LIGAIMADCTMEETEALYQYSKRIGINFQIQDDILDLIGDQK 216


>gi|62181813|ref|YP_218230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62129446|gb|AAX67149.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|267995503|gb|ACY90388.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|322716302|gb|EFZ07873.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 381

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 15/241 (6%)

Query: 3   GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58
           G +      N ++I+ +   D+    A+ ++  ++D +L++ + Y ++  GGK+IR  + 
Sbjct: 51  GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIA 110

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A          + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++
Sbjct: 111 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 168

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ D  I E    
Sbjct: 169 VGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYM 222

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
            +   KT  L   A +   I+A  +  +++ L+ +G  LG  FQL DDLLD   D   L 
Sbjct: 223 RVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 282

Query: 236 K 236
           K
Sbjct: 283 K 283


>gi|167770736|ref|ZP_02442789.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM
           17241]
 gi|167667331|gb|EDS11461.1| hypothetical protein ANACOL_02082 [Anaerotruncus colihominis DSM
           17241]
          Length = 293

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 8/232 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
              +    +++ +  L D L      +Q      ++ A+RY+LL  GK++R+ LV E A 
Sbjct: 3   FDEQFASYARQTNDALRDCLRYPGVRLQAA----VVDAMRYSLLDAGKRLRAALVLEFAR 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L +     A  +  AIE +H YSLIHDDLP MDN   RRGKP+ H ++ E TA++AG+ L
Sbjct: 59  LASAPREGATALACAIEMLHAYSLIHDDLPCMDNDDFRRGKPSCHKEFGESTALLAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
           LT AFE  +     L D  R + + +L+   G+ GM+GGQ++D   +   +DE  +  + 
Sbjct: 119 LTLAFETAAGAPL-LTDLQRVEAVCTLSKAGGVCGMIGGQVIDLACEGNTVDEATLDTLC 177

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +KTGAL+  A   G +   A +   +    +   +G+ FQ+ DD+LD   D
Sbjct: 178 TLKTGALLRAAARLGCLAGKADKKMYDAADRYAAAVGLAFQITDDILDVTGD 229


>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 295

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|225075990|ref|ZP_03719189.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens
           NRL30031/H210]
 gi|224952705|gb|EEG33914.1| hypothetical protein NEIFLAOT_01015 [Neisseria flavescens
           NRL30031/H210]
          Length = 324

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L ++  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPDDLAKVNVVINQAV-QSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYLQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862]
          Length = 287

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/221 (38%), Positives = 121/221 (54%), Gaps = 7/221 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           KL E S  +   ++D L    +H  +  N  +  A+ YA++ GGK++R  L    A  + 
Sbjct: 2   KLSEFSATVVPQIEDKLAAELAH--STSNQTMRDAMTYAVMAGGKRLRPLLTLAVAQSYG 59

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +     LR  +A+E IH YSLIHDDLP+MDN  +RRGKPT H  + E  AI+AG+ L   
Sbjct: 60  LGINGLLRAASALELIHTYSLIHDDLPAMDNDDMRRGKPTTHKAFGEDVAILAGDALQPL 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM 183
           A++ ++S    L    +++L L L    G  GM+ GQ++D+       I   QV  I   
Sbjct: 120 AYQWLAS-DPLLTTPQKAELTLQLALASGADGMVAGQVMDMAATNAATISLDQVKAIHYR 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           KTGAL+ +A  +G IMAHAS   KE L  FG   G+ FQ+ 
Sbjct: 179 KTGALIAYAAIAGGIMAHASDEVKETLWNFGMAYGLAFQIK 219


>gi|330826310|ref|YP_004389613.1| polyprenyl synthetase [Alicycliphilus denitrificans K601]
 gi|329311682|gb|AEB86097.1| Polyprenyl synthetase [Alicycliphilus denitrificans K601]
          Length = 297

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 2/218 (0%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           L  +    +  ++      L +A+RYA+L GGK++R  LV             ALR   A
Sbjct: 16  LAQVEAGLSLWVRADAPAGLGAAMRYAVLDGGKRLRPLLVLAACEAVGGLGQAALRAACA 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQ 137
           +E IH YSL+HDD+P MDN  +RRGKPTVH+++ +  A++AG+ L   AFE+++      
Sbjct: 76  VELIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGQAQALLAGDALQALAFELLTPEDGVP 135

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                R   +L+               L    + + + Q+  + ++KTGAL+  +   GA
Sbjct: 136 PAMQARLCRLLAQAAGADGMAGGQAIDLASVGQQLTQDQLRHMHRLKTGALLRASVVMGA 195

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                ++  ++ L  +G  +G+ FQ+ DD+LD  +D  
Sbjct: 196 ACGEPARVAEQALAQYGAAIGLAFQVVDDVLDVTQDSA 233


>gi|187932330|ref|YP_001886591.1| geranyltranstransferase [Clostridium botulinum B str. Eklund 17B]
 gi|187720483|gb|ACD21704.1| putative geranyltranstransferase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 289

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/220 (32%), Positives = 122/220 (55%), Gaps = 5/220 (2%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           +  ++D+ L +     +  +N  +  +  Y++ +GGK+IR  L+    SL+  N    + 
Sbjct: 6   LKNVIDEYL-KNYFINRNSYNKVVYESAGYSVNIGGKRIRPILLILTYSLYKDNIEKIMP 64

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + AAIE IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+ LL  A  ++   
Sbjct: 65  MAAAIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKS 124

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
             +L ++        ++   G +GM+GGQ++D+  E   I + ++  + + KTG L+  +
Sbjct: 125 SLELGESALKAS-YEISKAAGPEGMIGGQVVDVLSEVSEISKEELEYMHEKKTGELIRVS 183

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +G I+A     + E L  +G+ LG+ FQ+ DD+LD   
Sbjct: 184 IVAGGILARVPSGDIEALNEYGKKLGLAFQIKDDILDVIG 223


>gi|116492587|ref|YP_804322.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745]
 gi|116102737|gb|ABJ67880.1| farnesyl-diphosphate synthase [Pediococcus pentosaceus ATCC 25745]
          Length = 296

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 133/236 (56%), Gaps = 11/236 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN      +++N + +D  +D+L         +  N  L   ++Y++  GGK++R  ++ 
Sbjct: 1   MNSNFDDFVKQNVELLDQHIDELFDS-----DSTLNTDLKMMMKYSIDAGGKRVRPLVLL 55

Query: 60  ECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                F        L V AA+E +H YSLIHDDLP+MDN  +RRG+PT H ++ E  AI+
Sbjct: 56  AILKAFGKTPNYDILTVAAALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKKFGEAEAIL 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQ 176
           AG+ LLT AF+ ISS  T LKD I+S+L+LSL  + G  GM+ GQ+LDIQ         +
Sbjct: 116 AGDALLTVAFQWISS--TNLKDRIKSELVLSLASDAGASGMIAGQLLDIQGNQRHYSLAE 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +  +KTG ++ F  E+  IM  +     E ++ F  N G+ FQ+ DD++D  E
Sbjct: 174 LKHLHHLKTGKMLLFPAEAALIMKPSKLQVAELVKDFMANFGLAFQIHDDIIDVTE 229


>gi|218688284|ref|YP_002396496.1| geranyltranstransferase [Escherichia coli ED1a]
 gi|218425848|emb|CAR06654.1| geranyltranstransferase [Escherichia coli ED1a]
          Length = 299

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|149202564|ref|ZP_01879536.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035]
 gi|149143846|gb|EDM31880.1| farnesyl diphosphate synthase [Roseovarius sp. TM1035]
          Length = 287

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 91/233 (39%), Positives = 132/233 (56%), Gaps = 15/233 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + ++L   ++ I T L  +L    +         +   +RYA  GGK+IR FLV E A L
Sbjct: 1   MQARLAAEAETIQTHLSRVLAPFGT-------GPVAEGMRYATQGGKRIRGFLVMESARL 53

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +V    A+    AIE +H YSL+HDDLP+MDN  +RRG+PTVHI++DE TAI+ G+ L 
Sbjct: 54  HDVPETAAIWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHIKWDEATAILVGDALQ 113

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           + AFE+++ P       +R+ L LSL    G QGM+ GQ LDI  E     +   ++  +
Sbjct: 114 SLAFELVAHPDCG-PAEVRAGLTLSLARAAGGQGMVLGQALDIAAETATSPLSLDEITTL 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           Q  KTGAL+ ++  +GA MAHA       L  +   LG+ FQ+ DD++D   D
Sbjct: 173 QAGKTGALILWSATAGACMAHAD---MTPLSTYARALGLAFQIQDDVIDVTGD 222


>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
          Length = 366

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + E +  ++  LD      AS    +    L  A+RYALL GGK++R  L    
Sbjct: 64  FDFNAYMGEKAAAVNRALD------ASIPADEPPAALHEAMRYALLAGGKRVRPALCLAA 117

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            ++       A+   AA+E +H  SL+HDDLP MD+  +RRGKPT H+ Y E  A++ G+
Sbjct: 118 CAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGD 177

Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQD----E 170
            LL+ +F  ++   +   D           + +  L   IG +G++ GQ++D++     E
Sbjct: 178 ALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 237

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +   ++  I   KT AL+  +   GAI+   S  + E LR +  ++G++FQ+ DD+LD 
Sbjct: 238 TVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV 297

Query: 231 E---EDLPK 236
               E+L K
Sbjct: 298 TKSSEELGK 306


>gi|78776538|ref|YP_392853.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497078|gb|ABB43618.1| farnesyl-diphosphate synthase [Sulfurimonas denitrificans DSM 1251]
          Length = 282

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-ALRVGAA 78
            ++ LL      ++ H     +  +  + GGK+ R  L+    + +N   +  A     A
Sbjct: 4   FENFLLNHLPASKSIHPTYEEAVQKMLIAGGKRFRPALLLGVVNAYNPLMIGGAYHAAYA 63

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +H YSLIHDDLP+MDN  +RRG+PT+H+ +DEVTAI+AG+ L TYAFE++S+     
Sbjct: 64  IELLHTYSLIHDDLPAMDNSPLRRGEPTLHVLFDEVTAILAGDALNTYAFEVLSNA--PF 121

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196
            D  R +L+  L  N GL GM+ GQ +D   E   +    V ++   KT  L+  + + G
Sbjct: 122 SDFTRVELIRELATNGGLNGMVLGQAIDCYFENRVLSIDDVKILHTNKTAKLIAASLKMG 181

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AI+    +   E L  FG  LG++FQ+ DD+LD  +
Sbjct: 182 AIIVG-EEKLAETLYDFGIKLGLLFQIQDDILDVTQ 216


>gi|311280690|ref|YP_003942921.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
 gi|308749885|gb|ADO49637.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
          Length = 299

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 133/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    R +  L   +       Q   N  L+ A+ Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQTCVTRANDALRQFI-----EPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F V+  T     AA+ECIH YSL+HDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 57  TMFGVSLTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S  P  ++ D  R  ++  L    G+ GM GGQ LD+Q E   +D   +  
Sbjct: 117 LQTLAFSILSDAPMPEVADRDRIAMISELAQASGVAGMCGGQALDLQAEGQQVDLAALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRAALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|300767239|ref|ZP_07077151.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300495058|gb|EFK30214.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 308

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 1   MNGGLPSKLQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58
           MN  L ++ +   + +I+  LD+ L   +          L  A+RY+ L GGK++R  L 
Sbjct: 13  MNKQLLTEFESKWRPQINQYLDEQLQACSD------QSTLTDAMRYSVLAGGKRLRPLLT 66

Query: 59  TECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                 F++    A LR   A+E +H YSLIHDDLP+MDN  +RRG+PT H+++ E  AI
Sbjct: 67  LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 126

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           +AG+ L    FE I+   + L  +I +   L+L    G +GM+ GQ+ D+    + +   
Sbjct: 127 LAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGPRGMVAGQIADVLGAGQHLALP 184

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  + + KTGAL+ +A ++G I A      +E L  + +  G+ FQ+ DD+LD   
Sbjct: 185 ALQQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYADAYGLAFQIYDDILDVTS 241


>gi|224373694|ref|YP_002608066.1| geranyltranstransferase [Nautilia profundicola AmH]
 gi|223588370|gb|ACM92106.1| geranyltranstransferase [Nautilia profundicola AmH]
          Length = 281

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 77/223 (34%), Positives = 124/223 (55%), Gaps = 8/223 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAA 78
           ++D + +      + H     +     L GGK+ R  L+      +       A     A
Sbjct: 1   MEDFIKKNLIKAPSFHPYYEKALNEMLLAGGKRFRPKLLLSVVKAYEPLLVENAKYAAYA 60

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH YSLIHDDLP+MDN  +RRG PT+H+ YDE+TA++AG+ L TYAFE++S  K+  
Sbjct: 61  IELIHTYSLIHDDLPTMDNADLRRGHPTLHVTYDEITALLAGDALNTYAFEVLS--KSPF 118

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196
             +++ +L+  L+ N G  GM+ GQ +D   E   ++  ++  +   KT  L+  + + G
Sbjct: 119 SSDVKIELIKILSENAGAGGMVLGQAIDCYFENKKLNLDELKFLHLNKTAKLIAASLQMG 178

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           A++ +  +  +E+L  FG +LGI+FQ+ DD+LD     E+  K
Sbjct: 179 AVIVNLDKKLQEKLYNFGIDLGILFQVQDDILDVTMSSEEAGK 221


>gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 295

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEGLFQAPSPELS-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLSSRDAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|49086036|gb|AAT51323.1| PA4043 [synthetic construct]
          Length = 296

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +       R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L      
Sbjct: 2   IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL
Sbjct: 57  ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
              AFE+++  +   +++     ML+      G  GM+GGQ +D+      +D+  + ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  +   GA+ +  A       L  + E +G+ FQ+ DD+LD E D  
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTA 232


>gi|163786604|ref|ZP_02181052.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878464|gb|EDP72520.1| putative isoprenyl synthetase [Flavobacteriales bacterium ALC-1]
          Length = 330

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 12/223 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + I+      L         +  + L + I Y L LGGK++R  L    A +F      A
Sbjct: 8   QNIEQYQKSFLNYLEDFAIDKQPNNLYAPINYILKLGGKRLRPVLTLMTAEVFGEEAKNA 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +    ++E  H +SL+HDD+  MD   +RRGK TVH +++  T I++G+ +L  A+++  
Sbjct: 68  MNAALSVEVFHNFSLVHDDI--MDEAPLRRGKKTVHEKWNLNTGILSGDAMLILAYQLFE 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALM 189
           + + +        L L+   +     +  GQ  DI  E  ++    +   + + KT  L+
Sbjct: 126 NYEPETF------LALAKLFSKTALEVCEGQQYDIDFETRNDVTIPEYLKMIEYKTAVLV 179

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A + GAI+A AS  ++  +  FG  LG+ FQL DD LD   
Sbjct: 180 GAAMKMGAIVAKASAEDQNAIYDFGSYLGVAFQLQDDYLDAFG 222


>gi|312869913|ref|ZP_07730052.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
 gi|311094498|gb|EFQ52803.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
          Length = 291

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 12/232 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           +   L++   R+ + LD  L              L ++++Y+ L GGK++R  L      
Sbjct: 1   MVESLEQLKARVTSYLDTHLANDVD------QSTLAASMQYSVLAGGKRLRPTLTLATVE 54

Query: 64  LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +F        +R   A+E +H YSLIHDDLP+MDN  +RRG PT H ++    A +AG+G
Sbjct: 55  IFGGELTEDVVRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDG 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
           LLT AF+ ++    QL   ++SQL L L    G  GM+ GQ  DI+     +   Q+  +
Sbjct: 115 LLTLAFQWVTD--NQLPATMKSQLALELAKAAGPAGMVAGQARDIEGTGRRLTLDQLRYL 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + KTGAL+ +A  +G I+       +  L  FG + G+ FQ+ DDL+D   
Sbjct: 173 HRQKTGALLRYAVLAGGIITVQPAAVQRLLAQFGSSYGLAFQIYDDLMDVVG 224


>gi|116331899|ref|YP_801617.1| geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116125588|gb|ABJ76859.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 313

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 82/244 (33%), Positives = 126/244 (51%), Gaps = 17/244 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
               +         +  L+    QT S +  Q    L  A++Y+L  GGK++R  LV   
Sbjct: 4   SSFSAIFHAYRVTFENFLNS---QTLSILSEQSAPELFEAMKYSLVAGGKRLRPVLVLAA 60

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                      L +G+++ECIH YSLIHDDLPSMDN   RRG PT+H ++ E TAI+ G+
Sbjct: 61  FGGSQNETRNTLLLGSSLECIHTYSLIHDDLPSMDNDDFRRGLPTLHKRFSEATAILTGD 120

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEF--------- 171
            L ++AF  IS  +   +D    + +L + H   G  GM+ GQ+ D+Q E          
Sbjct: 121 ALNSFAFYFISLIQGDNEDYFLHRDLLEILHTGCGAPGMVSGQIYDLQMERENTKNRNSK 180

Query: 172 IDETQVFMI---QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            ++ +V M+    ++KTGAL+  A   G  +    +  +  L  +GE+LG++FQ+ DD+L
Sbjct: 181 SEQEKVAMVQLTHRLKTGALIKAALLLGNRLRKDWKKREGPLSKYGEDLGLLFQITDDIL 240

Query: 229 DCEE 232
           D E 
Sbjct: 241 DVEG 244


>gi|292487451|ref|YP_003530323.1| geranyltranstransferase [Erwinia amylovora CFBP1430]
 gi|291552870|emb|CBA19915.1| geranyltranstransferase [Erwinia amylovora CFBP1430]
          Length = 264

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 80/198 (40%), Positives = 110/198 (55%), Gaps = 5/198 (2%)

Query: 43  IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + Y ALLGGK++R FLV     +   +        AAIECIH YSLIHDDLP+MDN  +R
Sbjct: 1   MEYGALLGGKRLRPFLVYATGDMLRADDAALDAPAAAIECIHAYSLIHDDLPAMDNDSLR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RG+PT HI++ E +AI+AG+ L T AF I++  P   +    R  ++  L    G+ GM 
Sbjct: 61  RGQPTCHIKFGEESAILAGDALQTLAFSILADAPMPGVMAESRIAMLSELAQASGVAGMC 120

Query: 161 GGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENL 217
           GGQ LD+  E   +   ++  I + KTGAL+  A   GA+ A  S       L  F   +
Sbjct: 121 GGQALDLAAEGKKVTLNELEQIHRHKTGALIRSAVRLGALTAGESGRAALPALDRFANAI 180

Query: 218 GIIFQLADDLLDCEEDLP 235
           G+ FQ+ DD+LD   D  
Sbjct: 181 GLAFQVQDDILDVTGDTE 198


>gi|163851951|ref|YP_001639994.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
 gi|218530703|ref|YP_002421519.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
 gi|240139077|ref|YP_002963552.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Methylobacterium extorquens AM1]
 gi|163663556|gb|ABY30923.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
 gi|218523006|gb|ACK83591.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
 gi|240009049|gb|ACS40275.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Methylobacterium extorquens AM1]
          Length = 320

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 101/238 (42%), Positives = 146/238 (61%), Gaps = 7/238 (2%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
            G    +L + +  ++T L DLL  T    +     RL+ A+R+A+LGG K++R FL  E
Sbjct: 17  TGDFTHRLAQVADTVETFLVDLLGPTLQAGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A +       AL  GA +E +HCYSL+HDDLP+MD+  +RRGKPTVH  YDE TAI+ G
Sbjct: 77  TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDE 174
           + L T AFE+ + P+ Q    IR++L+L L    GL GM+GGQ+LD+  E       +D 
Sbjct: 137 DALQTLAFEVTADPRWQPDPAIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPATMDI 196

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                +Q MKTGA++ F+ E+GA++  A+ +E+  L  +G+ LG  FQ+ADD+LD E 
Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGANADERAALLRYGKALGQAFQVADDILDREA 254


>gi|238918995|ref|YP_002932509.1| polyprenyl synthetase, [Edwardsiella ictaluri 93-146]
 gi|238868563|gb|ACR68274.1| polyprenyl synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 301

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 88/239 (36%), Positives = 129/239 (53%), Gaps = 10/239 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
                +++   +R+D  L   L           +  L+ A+RY ALLGGK++R +LV   
Sbjct: 2   ASFEQQMKTCHQRVDAALSRALDTL-----PFADGPLVGAMRYGALLGGKRLRPYLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            SLF  +        AA+ECIH YSL+HDDLP+MD+  +RRG+PT HI++ E  AI+AG+
Sbjct: 57  GSLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116

Query: 122 GLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178
            L T AF I++  +   + D  R Q++  L H  G+ GM GGQ LD++ E   +    + 
Sbjct: 117 ALQTLAFSILADGQMPGVTDRDRLQMLSELAHASGVAGMCGGQALDLEAEGRHVALAALE 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I + KTGAL+  A   GA+   A   N    L  +   +G+ FQ+ DD+LD   D  K
Sbjct: 177 QIHRHKTGALIRCAVRMGALAGGAPGRNALPVLDRYAAAIGLAFQVQDDILDVVGDSSK 235


>gi|298206983|ref|YP_003715162.1| putative isoprenoid biosynthesis related protein [Croceibacter
           atlanticus HTCC2559]
 gi|83849617|gb|EAP87485.1| putative isoprenoid biosynthesis related protein [Croceibacter
           atlanticus HTCC2559]
          Length = 324

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 13/227 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + I +  +  +    S +  +  + L   I Y L LGGK++R  LV     +F  ++   
Sbjct: 2   QEISSYREAFIAHMNSKVSVKEPENLYEPISYILNLGGKRLRPILVLMATEIFGEDYTKG 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E  H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++  
Sbjct: 62  LDAALAVEVFHNFSLVHDDI--MDDAPLRRGKDTVHEKWDLNTGILSGDAMLINAYQLFE 119

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALM 189
           +              L+         +  GQ  DI  E  D+    +   + + KT  L+
Sbjct: 120 NYDGSTFKE------LAKLFTKTAIEVCEGQQYDIDFETRDDVTIPEYLKMIEFKTAVLV 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A + GAI+A+A  + K+++  FG  LG+ FQL DD LD   D PK
Sbjct: 174 GAALQMGAIVANAEDSCKDKIYEFGCLLGLAFQLQDDYLDAFGD-PK 219


>gi|161616314|ref|YP_001590279.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194443184|ref|YP_002042563.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449256|ref|YP_002047334.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472845|ref|ZP_03078829.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736065|ref|YP_002116255.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195873559|ref|ZP_02697387.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197250149|ref|YP_002148230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264749|ref|ZP_03164823.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197301014|ref|ZP_02663064.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|198241919|ref|YP_002217276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200386848|ref|ZP_03213460.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204931208|ref|ZP_03222002.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205357197|ref|ZP_02345799.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205358083|ref|ZP_02575589.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205358511|ref|ZP_02656973.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205359199|ref|ZP_02668072.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205359738|ref|ZP_02831626.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205360595|ref|ZP_02684656.2| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|224585102|ref|YP_002638901.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|161365678|gb|ABX69446.1| hypothetical protein SPAB_04122 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401847|gb|ACF62069.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407560|gb|ACF67779.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194459209|gb|EDX48048.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711567|gb|ACF90788.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195633125|gb|EDX51539.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197213852|gb|ACH51249.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197243004|gb|EDY25624.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289078|gb|EDY28447.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197936435|gb|ACH73768.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603946|gb|EDZ02491.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204319975|gb|EDZ05181.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205323255|gb|EDZ11094.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205327615|gb|EDZ14379.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333924|gb|EDZ20688.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205337771|gb|EDZ24535.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205343490|gb|EDZ30254.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348475|gb|EDZ35106.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|224469630|gb|ACN47460.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|312914332|dbj|BAJ38306.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087750|emb|CBY97514.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225271|gb|EFX50330.1| Octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615309|gb|EFY12230.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618332|gb|EFY15223.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622863|gb|EFY19707.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626815|gb|EFY23612.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631384|gb|EFY28144.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635349|gb|EFY32063.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643348|gb|EFY39912.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647080|gb|EFY43581.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648883|gb|EFY45328.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655075|gb|EFY51386.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657678|gb|EFY53946.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664174|gb|EFY60372.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667457|gb|EFY63619.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674705|gb|EFY70797.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675662|gb|EFY71735.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682298|gb|EFY78321.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|323131665|gb|ADX19095.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323195894|gb|EFZ81065.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199011|gb|EFZ84108.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204289|gb|EFZ89298.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207636|gb|EFZ92583.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323214747|gb|EFZ99496.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221227|gb|EGA05653.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323233295|gb|EGA17389.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239332|gb|EGA23382.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242417|gb|EGA26443.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323255257|gb|EGA39034.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262720|gb|EGA46276.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264030|gb|EGA47538.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269416|gb|EGA52871.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326625055|gb|EGE31400.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326629328|gb|EGE35671.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 370

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 15/241 (6%)

Query: 3   GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58
           G +      N ++I+ +   D+    A+ ++  ++D +L++ + Y ++  GGK+IR  + 
Sbjct: 40  GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIA 99

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A          + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++
Sbjct: 100 VLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 157

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ D  I E    
Sbjct: 158 VGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYM 211

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
            +   KT  L   A +   I+A  +  +++ L+ +G  LG  FQL DDLLD   D   L 
Sbjct: 212 RVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLG 271

Query: 236 K 236
           K
Sbjct: 272 K 272


>gi|218549919|ref|YP_002383710.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
 gi|218357460|emb|CAQ90099.1| geranyltranstransferase [Escherichia fergusonii ATCC 35469]
          Length = 299

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|255635048|gb|ACU17882.1| unknown [Glycine max]
          Length = 342

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 18/243 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
             L +       +I+  LD+ +         Q   ++  A+RY++L  G K+    +   
Sbjct: 48  FDLKTYCANLMVQINQKLDEAI-------PVQFPPQIYEAMRYSVLAKGAKRAPPVMCIS 100

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              LF  + L A     A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG
Sbjct: 101 ACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAG 160

Query: 121 NGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
           + L    F  I S  P   + ++   +++  +  ++G  GM  GQ LD++        V 
Sbjct: 161 DALFPLGFRHIVSQTPSDLVPESHLLRVIAEIARSVGSTGMAAGQFLDLEG---GPNAVG 217

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDL 234
            IQ+ K G +   +   G  +A A  +E ERLR +G  +G+++ + DD+++     E D 
Sbjct: 218 FIQEKKFGEMGESSAVCGGFLAGAEDDEIERLRRYGRAVGVLYAVVDDIIEERLKVEGDG 277

Query: 235 PKK 237
            +K
Sbjct: 278 NRK 280


>gi|289663219|ref|ZP_06484800.1| polyprenyl synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668286|ref|ZP_06489361.1| polyprenyl synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 291

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 1/209 (0%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+      T    RL +A+RYA+LGG K++R  LV    +LF            A+E IH
Sbjct: 17  LEAGLPSATHAPQRLHAAMRYAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++  T  +  + 
Sbjct: 77  AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASTSAELRVG 136

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               L+               +D   +      +  +  +KTGAL+  A   GA+   A+
Sbjct: 137 WMQSLATAAGAAGMCGGQALDMDATGQLQPLQDLQRMHALKTGALIRAAVRMGALTGGAA 196

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 197 ADDQQRLGAFADALGLAFQVRDDILDVES 225


>gi|254488187|ref|ZP_05101392.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101]
 gi|214045056|gb|EEB85694.1| geranylgeranyl pyrophosphate synthase [Roseobacter sp. GAI101]
          Length = 332

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 16/232 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             +   L  +   ++T++ D        M ++H  R+     + +  GGK++R  L    
Sbjct: 11  DRMAEYLAVDMAAVNTLIRD-------RMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAA 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+
Sbjct: 64  AHLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   +F++++       +N+R   +LS       +G +  Q+   Q+   DE+    + 
Sbjct: 122 YLFARSFQLMTET-----NNMRVLAILSNASATIAEGEVL-QLTAAQNLATDESVYLQVV 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KT AL   A E G ++A A   + + L  FG+ LGI FQ+ DDLLD + D
Sbjct: 176 RGKTAALFSAATEVGGVIAGAPDAQVQALFDFGDALGIAFQIVDDLLDYQGD 227


>gi|306813113|ref|ZP_07447306.1| geranyltranstransferase [Escherichia coli NC101]
 gi|331645594|ref|ZP_08346698.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli M605]
 gi|331656475|ref|ZP_08357437.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA206]
 gi|331681814|ref|ZP_08382447.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H299]
 gi|305853876|gb|EFM54315.1| geranyltranstransferase [Escherichia coli NC101]
 gi|324010099|gb|EGB79318.1| polyprenyl synthetase [Escherichia coli MS 57-2]
 gi|331045756|gb|EGI17882.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli M605]
 gi|331054723|gb|EGI26732.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA206]
 gi|331081016|gb|EGI52181.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H299]
          Length = 299

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|324114640|gb|EGC08608.1| polyprenyl synthetase [Escherichia fergusonii B253]
          Length = 299

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|192361220|ref|YP_001981260.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107]
 gi|190687385|gb|ACE85063.1| octaprenyl-diphosphate synthase [Cellvibrio japonicus Ueda107]
          Length = 320

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 11/218 (5%)

Query: 21  DDLLLQTASHMQTQHND-RLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           DD        +   H+D  L+  I + L   GGK++R  LV   A          L + A
Sbjct: 10  DDFAAVNQLIIDQLHSDVGLVENIGHYLVEAGGKRLRPLLVMLAAKSLGYTGKQHLDLAA 69

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            IE IH  +L+HDD+  M    +RRG+PT + Q+    +++ G+ L + AF+++ +  + 
Sbjct: 70  IIEFIHTATLLHDDVVDM--SQLRRGRPTANAQWGNAPSVLVGDFLYSRAFQMMVAIGS- 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               +    +LS T N   +G +  Q+++ +D  + E   F +   KT  L   ACE G 
Sbjct: 127 ----MDVMAILSDTTNTIAEGEV-QQLVNAKDPNVTEENYFQVIDKKTAILFSAACEVGG 181

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++A A+  ++E LR +G ++GI FQL DD LD   D  
Sbjct: 182 VIAGANTRQREALRHYGSHVGIAFQLVDDALDYTGDAA 219


>gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1]
 gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2]
 gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
 gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1]
 gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
          Length = 295

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +       R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L      
Sbjct: 2   IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL
Sbjct: 57  ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
              AFE+++  +   +++     ML+      G  GM+GGQ +D+      +D+  + ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  +   GA+ +  A       L  + E +G+ FQ+ DD+LD E D  
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTA 232


>gi|114797210|ref|YP_760540.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444]
 gi|114737384|gb|ABI75509.1| geranyltranstransferase [Hyphomonas neptunium ATCC 15444]
          Length = 295

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 95/234 (40%), Positives = 144/234 (61%), Gaps = 8/234 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
               +L E + ++   LD L+   +          L+ A+R+A L  GK++R F V E  
Sbjct: 3   NFEQRLTEVADKVTVALDQLIPPASGP-----EANLMRAMRHAALANGKRMRPFFVLETG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           ++F  +  + LR  AA+ECIHCYSL+HDDLP MD+   RRG+PTVH  +DE TA++AG+ 
Sbjct: 58  AMFGASEKSLLRTAAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           LLT AF+I++S +T     +R  L+  L    G +GM+GGQM+D+ +E    D   +  +
Sbjct: 118 LLTLAFKILASSETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRM 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           Q++KTGAL+ +A E+G I+ HA + E+  L  F  +LG+ +Q+ADD+LD E D 
Sbjct: 178 QRLKTGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDE 231


>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
 gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
 gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
 gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
          Length = 295

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEGLFQAPSPELS-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    ++   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLSSRNAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|299139494|ref|ZP_07032668.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598422|gb|EFI54586.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 324

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 39/270 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   + S L+  +   D  L+ LL        T     +  A+R++   GGK++R  L  
Sbjct: 1   MTIDVQSILKTGAAITDAALERLLP-----AATIEPYSIHRAMRHSTFAGGKRLRPILCM 55

Query: 60  ECASLFN-------------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           E A +                +      + AA+E +H YSLIHDDLP++DN  +RRG+PT
Sbjct: 56  EAAKMVASTDFYPPEEAAPAGHPEGVANLAAALEMLHTYSLIHDDLPALDNDDLRRGQPT 115

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL---------- 156
            H+ + E TAI+AG+ L T AF+ I+S     +  +     +SL+   G+          
Sbjct: 116 CHVVFGEATAILAGDALQTLAFQTIASLPAPPEAVVAILRKISLSIGTGIGRWGDHDTGI 175

Query: 157 -QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKER 209
             GM+GGQ++DI+ E        V  I + KTGAL+  +  +GAI          +  ER
Sbjct: 176 APGMIGGQVVDIESEGTKPTPDLVEAIHRAKTGALITVSIVAGAIYGSSRHGLPSSYHER 235

Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
           +R FGE  G+ FQ+ DD+LD     E+L K
Sbjct: 236 IRTFGEKAGLAFQIVDDVLDMTQSSEELGK 265


>gi|296447264|ref|ZP_06889193.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b]
 gi|296255226|gb|EFH02324.1| Polyprenyl synthetase [Methylosinus trichosporium OB3b]
          Length = 306

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 108/244 (44%), Positives = 147/244 (60%), Gaps = 8/244 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           +     +L E +      LD LL  +    +     RLL A+RY AL GGK++R FL  E
Sbjct: 3   DQDFRRRLDEAAAATQATLDALLAPSPLEGEIARPARLLEAMRYVALGGGKRLRPFLALE 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A LF V   +A R  AAIE IHCYSL HDDLP+MD+  +RRG+PT H  +DE TAI+AG
Sbjct: 63  SARLFGVCGESAARAAAAIEMIHCYSLAHDDLPAMDDDDLRRGRPTAHKAFDEATAILAG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQ 176
           +GLLTYAF++++ P T     IR++L+L+L    GL GM+GGQ LD++ E     + + +
Sbjct: 123 DGLLTYAFDVLADPATHADPLIRARLVLALARAAGLGGMVGGQALDLEAEKAAAPLTQEE 182

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
              +Q MKTGAL+    + GAI+  AS      L  +G+ LG  FQ+ADD+LD E D   
Sbjct: 183 TLRLQAMKTGALLRVCVDFGAILGGASAEVAAALGRYGDALGAAFQIADDILDAEGDEAA 242

Query: 234 LPKK 237
           L K+
Sbjct: 243 LGKR 246


>gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054]
 gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424]
 gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
 gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054]
 gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424]
 gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
          Length = 294

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 117/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++  +  L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDAEA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|82542909|ref|YP_406856.1| geranyltranstransferase [Shigella boydii Sb227]
 gi|81244320|gb|ABB65028.1| geranyltranstransferase [Shigella boydii Sb227]
 gi|320186050|gb|EFW60795.1| geranyltranstransferase [Shigella flexneri CDC 796-83]
 gi|332098531|gb|EGJ03497.1| geranyltranstransferase [Shigella boydii 3594-74]
          Length = 299

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|116254354|ref|YP_770192.1| geranyltranstransferase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115259002|emb|CAK10111.1| putative geranyltranstransferase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 304

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 116/236 (49%), Positives = 164/236 (69%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N++ I+ +LD LL  +A   +    + L  A+ YA+L GGK++R FLV E 
Sbjct: 6   DTFETRLKNNARDIEALLDALLSPSAFSDEIARPETLRDAMHYAVLNGGKRLRPFLVVES 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   ALRVGAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+
Sbjct: 66  AALLGGDAEAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLTYAF+II++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  
Sbjct: 126 SLLTYAFDIIAAPETTLADTSKASLVLALARAAGLGGMAGGQALDLAAEKQAPDEAGIIR 185

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GA+++ +   ++ RLR FGE +G+ FQLADD+LD   D  
Sbjct: 186 LQAMKTGALIRFACEAGAVISGSLAEDRRRLRAFGEKIGLAFQLADDILDLTSDAA 241


>gi|323976098|gb|EGB71191.1| polyprenyl synthetase [Escherichia coli TW10509]
          Length = 299

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLNALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|74316898|ref|YP_314638.1| farnesyl-diphosphate synthase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056393|gb|AAZ96833.1| polyprenyl synthetase [Thiobacillus denitrificans ATCC 25259]
          Length = 296

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 127/235 (54%), Gaps = 8/235 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M     +  Q    RI+ +L + L  +          RL  A+RYA+LGG K++R  L  
Sbjct: 1   MMSDFSAWTQACQARIEHVLAERLPPSDIA-----PKRLHEAMRYAVLGGGKRVRPLLAF 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            AA+E IH YSL+HDD+P+MD+  +RRGKPTVH+++DE TA++ 
Sbjct: 56  AAGDVTGAAVEQVQHAAAAVELIHAYSLVHDDMPAMDDDALRRGKPTVHVEFDEPTALLV 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177
           G+ L + AF+I++SP      + +  ++  L    G +GM GGQ +D+ +  + +D T++
Sbjct: 116 GDALQSLAFDILASPGLAQAASTQLAMVQLLARASGSRGMAGGQAIDLANVGKSLDLTEL 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTGAL+  +   GA     S+  +  L  + + +G+ FQ+ DD+LD E 
Sbjct: 176 EFMHIHKTGALIRASVLLGAECGTLSEPARTALDHYAKCIGLAFQVVDDVLDAEA 230


>gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
 gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
          Length = 294

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 117/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       ++    RL  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AESAVPTRLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+    I     Q+  + 
Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSLGMAGGQAIDLASVGIKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|157155867|ref|YP_001461603.1| geranyltranstransferase [Escherichia coli E24377A]
 gi|157159942|ref|YP_001457260.1| geranyltranstransferase [Escherichia coli HS]
 gi|193065191|ref|ZP_03046264.1| geranyltranstransferase [Escherichia coli E22]
 gi|193068605|ref|ZP_03049566.1| geranyltranstransferase [Escherichia coli E110019]
 gi|194428795|ref|ZP_03061330.1| geranyltranstransferase [Escherichia coli B171]
 gi|218552984|ref|YP_002385897.1| geranyltranstransferase [Escherichia coli IAI1]
 gi|218693881|ref|YP_002401548.1| geranyltranstransferase [Escherichia coli 55989]
 gi|260842619|ref|YP_003220397.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
 gi|260853641|ref|YP_003227532.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
 gi|260866579|ref|YP_003232981.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
 gi|300818254|ref|ZP_07098465.1| polyprenyl synthetase [Escherichia coli MS 107-1]
 gi|300820340|ref|ZP_07100492.1| polyprenyl synthetase [Escherichia coli MS 119-7]
 gi|300903314|ref|ZP_07121242.1| polyprenyl synthetase [Escherichia coli MS 84-1]
 gi|300924142|ref|ZP_07140134.1| polyprenyl synthetase [Escherichia coli MS 182-1]
 gi|301301569|ref|ZP_07207704.1| polyprenyl synthetase [Escherichia coli MS 124-1]
 gi|301330717|ref|ZP_07223319.1| polyprenyl synthetase [Escherichia coli MS 78-1]
 gi|307312204|ref|ZP_07591840.1| Polyprenyl synthetase [Escherichia coli W]
 gi|331666770|ref|ZP_08367644.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA271]
 gi|331676088|ref|ZP_08376800.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H591]
 gi|157065622|gb|ABV04877.1| geranyltranstransferase [Escherichia coli HS]
 gi|157077897|gb|ABV17605.1| geranyltranstransferase [Escherichia coli E24377A]
 gi|192927165|gb|EDV81786.1| geranyltranstransferase [Escherichia coli E22]
 gi|192957968|gb|EDV88410.1| geranyltranstransferase [Escherichia coli E110019]
 gi|194413098|gb|EDX29385.1| geranyltranstransferase [Escherichia coli B171]
 gi|218350613|emb|CAU96305.1| geranyltranstransferase [Escherichia coli 55989]
 gi|218359752|emb|CAQ97293.1| geranyltranstransferase [Escherichia coli IAI1]
 gi|257752290|dbj|BAI23792.1| geranyltranstransferase [Escherichia coli O26:H11 str. 11368]
 gi|257757766|dbj|BAI29263.1| geranyltranstransferase [Escherichia coli O103:H2 str. 12009]
 gi|257762935|dbj|BAI34430.1| geranyltranstransferase [Escherichia coli O111:H- str. 11128]
 gi|300404609|gb|EFJ88147.1| polyprenyl synthetase [Escherichia coli MS 84-1]
 gi|300419595|gb|EFK02906.1| polyprenyl synthetase [Escherichia coli MS 182-1]
 gi|300527125|gb|EFK48194.1| polyprenyl synthetase [Escherichia coli MS 119-7]
 gi|300529145|gb|EFK50207.1| polyprenyl synthetase [Escherichia coli MS 107-1]
 gi|300843066|gb|EFK70826.1| polyprenyl synthetase [Escherichia coli MS 124-1]
 gi|300843378|gb|EFK71138.1| polyprenyl synthetase [Escherichia coli MS 78-1]
 gi|306907706|gb|EFN38208.1| Polyprenyl synthetase [Escherichia coli W]
 gi|315059698|gb|ADT74025.1| geranyltranstransferase [Escherichia coli W]
 gi|315256246|gb|EFU36214.1| polyprenyl synthetase [Escherichia coli MS 85-1]
 gi|323152111|gb|EFZ38404.1| geranyltranstransferase [Escherichia coli EPECa14]
 gi|323160472|gb|EFZ46420.1| geranyltranstransferase [Escherichia coli E128010]
 gi|323178316|gb|EFZ63894.1| geranyltranstransferase [Escherichia coli 1180]
 gi|323379736|gb|ADX52004.1| Polyprenyl synthetase [Escherichia coli KO11]
 gi|323945322|gb|EGB41378.1| polyprenyl synthetase [Escherichia coli H120]
 gi|324116905|gb|EGC10818.1| polyprenyl synthetase [Escherichia coli E1167]
 gi|331065994|gb|EGI37878.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA271]
 gi|331076146|gb|EGI47428.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H591]
 gi|333010863|gb|EGK30289.1| geranyltranstransferase [Shigella flexneri K-272]
 gi|333021362|gb|EGK40615.1| geranyltranstransferase [Shigella flexneri K-227]
          Length = 299

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
 gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
          Length = 291

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/225 (32%), Positives = 121/225 (53%), Gaps = 7/225 (3%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHL 70
           ++ ++ + D +    A+H+    +   L +++RY+ + GGK++R  L      +      
Sbjct: 2   AESLEQLKDRVTAYLATHLANDIDQPTLAASMRYSTMAGGKRLRPTLTLATVEILGGQLD 61

Query: 71  -TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +R   A+E +H YSLIHDDLP+MDN  +RRG PT H ++    A +AG+GLLT AF+
Sbjct: 62  ADVMRAATALELLHTYSLIHDDLPAMDNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQ 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
            ++     L   ++S+L L L    G  GM+ GQ  DI+     +   Q+  + + KTGA
Sbjct: 122 WVTD--NHLPAAVKSRLALELAKAAGPAGMVAGQARDIEGTGQQLSLDQLRYLHRQKTGA 179

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+ +A  +G I+    +  +  L  FG + G+ FQ+ DDL+D   
Sbjct: 180 LLRYAVLAGGIITAQPEKVQRLLAQFGASYGLAFQIYDDLMDVVG 224


>gi|110640682|ref|YP_668410.1| geranyltranstransferase [Escherichia coli 536]
 gi|191173497|ref|ZP_03035024.1| geranyltranstransferase [Escherichia coli F11]
 gi|300997392|ref|ZP_07181732.1| polyprenyl synthetase [Escherichia coli MS 200-1]
 gi|110342274|gb|ABG68511.1| geranyltranstransferase [Escherichia coli 536]
 gi|190906206|gb|EDV65818.1| geranyltranstransferase [Escherichia coli F11]
 gi|300304211|gb|EFJ58731.1| polyprenyl synthetase [Escherichia coli MS 200-1]
 gi|324010681|gb|EGB79900.1| polyprenyl synthetase [Escherichia coli MS 60-1]
          Length = 299

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|83716251|ref|YP_438813.1| geranyltranstransferase [Burkholderia thailandensis E264]
 gi|167577162|ref|ZP_02370036.1| geranyltranstransferase [Burkholderia thailandensis TXDOH]
 gi|167615332|ref|ZP_02383967.1| geranyltranstransferase [Burkholderia thailandensis Bt4]
 gi|257141897|ref|ZP_05590159.1| geranyltranstransferase [Burkholderia thailandensis E264]
 gi|83650076|gb|ABC34140.1| geranyltranstransferase [Burkholderia thailandensis E264]
          Length = 294

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++   +R++T L   L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FDQWMRSVLERVETALGHYLP-----AETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +        +A+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGASEAALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L  + ++ L+  L    G  GM GGQ +D+      +    +  + 
Sbjct: 118 QSQAFVALTDAAA-LPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  +   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRASVRMGALAGETPSDDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231


>gi|323344513|ref|ZP_08084738.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
 gi|323094640|gb|EFZ37216.1| polyprenyl synthetase [Prevotella oralis ATCC 33269]
          Length = 323

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           D IL+       +    +    L   I+Y L LGGK+IR  L+    +L+  +  + L  
Sbjct: 4   DEILNIFNEYLDNLQYARKPHTLYEPIKYVLSLGGKRIRPTLMLLAYNLYKDDPQSILSS 63

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIE  H Y+L+HDDL  MDN  IRRG+PTVH ++D  TAI++G+ +L  A+  ++   
Sbjct: 64  ACAIETYHNYTLLHDDL--MDNAAIRRGRPTVHKKWDANTAILSGDSMLVLAYHYMAQC- 120

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
               D  + + ++ L     L  +  GQ LD+  E    + E +   + ++KT  L+  +
Sbjct: 121 ----DGSKLKEVIDLFTETAL-EIGEGQQLDMDFETRNDVTEAEYIEMIRLKTSVLLACS 175

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + GAI+A +S  + + L  FGE +G+ FQL DD LD   D  
Sbjct: 176 LKIGAILAGSSAEDADYLYRFGEQIGLAFQLQDDFLDVYGDTK 218


>gi|28378303|ref|NP_785195.1| geranyltranstransferase [Lactobacillus plantarum WCFS1]
 gi|254556510|ref|YP_003062927.1| geranyltranstransferase [Lactobacillus plantarum JDM1]
 gi|28271138|emb|CAD64043.1| geranyltranstransferase [Lactobacillus plantarum WCFS1]
 gi|254045437|gb|ACT62230.1| geranyltranstransferase [Lactobacillus plantarum JDM1]
          Length = 296

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 1   MNGGLPSKLQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58
           MN  L ++ +   + +I+  LD+ L   +          L  A+RY+ L GGK++R  L 
Sbjct: 1   MNKQLLTEFESKWRPQINQYLDEQLQACSD------QSTLTDAMRYSVLAGGKRLRPLLT 54

Query: 59  TECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                 F++    A LR   A+E +H YSLIHDDLP+MDN  +RRG+PT H+++ E  AI
Sbjct: 55  LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 114

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           +AG+ L    FE I+   + L  +I +   L+L    G +GM+ GQ+ D+    + +   
Sbjct: 115 LAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGPRGMVAGQVADVLGAGQHLALP 172

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  + + KTGAL+ +A ++G I A      +E L  + +  G+ FQ+ DD+LD   
Sbjct: 173 ALQQLHREKTGALIHYAVQAGLIQAQVQPTVQELLLQYADAYGLAFQIYDDILDVTS 229


>gi|170767787|ref|ZP_02902240.1| geranyltranstransferase [Escherichia albertii TW07627]
 gi|170123275|gb|EDS92206.1| geranyltranstransferase [Escherichia albertii TW07627]
          Length = 299

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYAIG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  QMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S     ++ D  R  ++  L +  G+ GM GGQ LD+  E   +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRLAMISELANASGIAGMCGGQALDLDAEGKQVPLEALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|205351734|ref|YP_002225535.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207855904|ref|YP_002242555.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|205271515|emb|CAR36333.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206707707|emb|CAR31991.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326626769|gb|EGE33112.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 299

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    + +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   I    +  
Sbjct: 117 LQTLAFAILSDAPMPEVTDRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|16759400|ref|NP_455017.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142828|ref|NP_806170.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213052895|ref|ZP_03345773.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213427858|ref|ZP_03360608.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213586122|ref|ZP_03367948.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213613222|ref|ZP_03371048.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647259|ref|ZP_03377312.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213855375|ref|ZP_03383615.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289825066|ref|ZP_06544418.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25315864|pir||AG0554 geranyltranstransferase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501691|emb|CAD08879.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138460|gb|AAO70030.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 299

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    + +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   I    +  
Sbjct: 117 LQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|237749332|ref|ZP_04579812.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
 gi|229380694|gb|EEO30785.1| geranyltranstransferase [Oxalobacter formigenes OXCC13]
          Length = 297

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 71/233 (30%), Positives = 121/233 (51%), Gaps = 3/233 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +P+   +  + + + +++ L       +   +  L  ++RYA+L GGK+IR  LV     
Sbjct: 3   VPASFDDWMRNVQSTMEESLSSLLPEGKLASSS-LHESMRYAVLDGGKRIRPLLVFATGY 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF+   L   R  AA+E IH YSL+HDD+P MDN  +RRGKPTVH+++ E TA++AG+ L
Sbjct: 62  LFDAEKLALARAAAAVEMIHAYSLVHDDMPCMDNDVLRRGKPTVHVRFGEATALLAGDAL 121

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              AF ++S+ +      +    +LS               L    + +   ++  + ++
Sbjct: 122 QAQAFVVLSNQQCDPVLTVEMMRLLSEAAGAAGMCGGQAIDLASVGKSLTVNELENMHRL 181

Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KTGAL+  +   GA  +   ++ EK  L  + + +G+ FQ+ DD+LD   D  
Sbjct: 182 KTGALLTASVFLGAYCSKIPTEQEKNALNAYAKAIGLAFQVVDDILDVTADSA 234


>gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
 gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
          Length = 294

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSTETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|67906634|gb|AAY82729.1| predicted geranyltranstransferase [uncultured bacterium
           eBACmed86H08]
          Length = 287

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/222 (38%), Positives = 137/222 (61%), Gaps = 4/222 (1%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           K+I+ I  D+     + ++ Q    L++++ Y L  GGKKIRS ++ +   +F+V +   
Sbjct: 3   KKINKIGKDINKFLKNFLKKQKRTELITSMNYGLFPGGKKIRSKIIIDVGKIFSVPYHHL 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +RVGAA+ECIH YSLIHDDLP MDN  +RRGK + H ++ E TA++AGN LLT AFEI+S
Sbjct: 63  IRVGAAVECIHAYSLIHDDLPCMDNDDLRRGKLSTHKKFGESTAVLAGNSLLTLAFEILS 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMC 190
               ++ +  +++L+ SL++  G  G+ GGQ LD+  E   + + ++  +Q  KTG L  
Sbjct: 123 EKNFKINETKKNKLINSLSNTSGHLGIAGGQYLDLNFEKKRVSKKKIIDMQLNKTGKLFS 182

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           F+  +  I+A+ S     + +  G ++G++FQ+ DD LD   
Sbjct: 183 FSTIAPLIIANKSAK-INQFKRIGLDIGLLFQIVDDFLDYSG 223


>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5]
 gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas fluorescens Pf-5]
          Length = 295

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/241 (31%), Positives = 128/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +    +  R+D  +  L    +  +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   ITAYQASSQARVDAAMHTLFTAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  +  P  +     IR +++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A + E + L+ + + +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
          Length = 302

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/238 (35%), Positives = 132/238 (55%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  + + L E   +++  L   L             RL  A+ Y+LL GGK++R  L   
Sbjct: 7   SQQVKTILAERGAQVEAYLQHCLD------AIPMQGRLKEAMYYSLLAGGKRLRPVLCLS 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A+LF ++    +   A++E IH YSLIHDDLP+MD+  +RRG+P+ H  +DE TAI+AG
Sbjct: 61  TAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGRPSCHKAFDEATAILAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + LLT AF  ++S    L      + + S++   G  GM+GGQ+LD+       +    +
Sbjct: 121 DALLTDAFGFMASTVKDLPAGRVLEALASVSSAAGSAGMVGGQILDMDCTGKTNVPLETL 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +  +KTGA+   AC SG ++A AS+++   LR +GE LG+ FQ+ DD+LD   D  
Sbjct: 181 QTLHALKTGAMFRVACVSGGLLAGASESDIASLRAYGEALGVTFQIVDDILDETADTA 238


>gi|91793921|ref|YP_563572.1| polyprenyl synthetase [Shewanella denitrificans OS217]
 gi|91715923|gb|ABE55849.1| farnesyl-diphosphate synthase [Shewanella denitrificans OS217]
          Length = 293

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 92/238 (38%), Positives = 131/238 (55%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   ++   +R+D +L + L Q            L  A+ Y AL+GGK+IR FLV     
Sbjct: 2   LAQAIELYQQRVDIVLKNKLEQLD-----DCAPELKDAMTYGALMGGKRIRPFLVYAIGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +  V         AAIECIH YSLIHDDLP+MD+  +RRGKPTVHI ++E  AI+AG+ L
Sbjct: 57  MLKVPLEKLDNAAAAIECIHAYSLIHDDLPAMDDDDLRRGKPTVHIAFNEAQAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            + AFE+++  +       +  ++  L    G QGM GGQ +D+   ++ ID  Q+  + 
Sbjct: 117 QSLAFELMTESQADTSPTQQLHMVKVLAKAAGYQGMCGGQAIDLAATNKAIDLAQLTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             KTGAL+  A E   I+A AS  E+  L  F   LG+ FQ+ DD+LD     ++L K
Sbjct: 177 NKKTGALISCAVELAIILADASPVERAHLAQFSHALGLAFQVQDDILDVTVSTQELGK 234


>gi|15800151|ref|NP_286163.1| geranyltranstransferase [Escherichia coli O157:H7 EDL933]
 gi|15829729|ref|NP_308502.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
 gi|168749882|ref|ZP_02774904.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
 gi|168756962|ref|ZP_02781969.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
 gi|168761626|ref|ZP_02786633.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
 gi|168768371|ref|ZP_02793378.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
 gi|168776274|ref|ZP_02801281.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
 gi|168783286|ref|ZP_02808293.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
 gi|168786267|ref|ZP_02811274.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
 gi|168800303|ref|ZP_02825310.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
 gi|195938512|ref|ZP_03083894.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4024]
 gi|208807604|ref|ZP_03249941.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
 gi|208815942|ref|ZP_03257121.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
 gi|208822955|ref|ZP_03263273.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
 gi|209397720|ref|YP_002269066.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
 gi|217326244|ref|ZP_03442328.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
 gi|254791605|ref|YP_003076442.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
 gi|261223902|ref|ZP_05938183.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256384|ref|ZP_05948917.1| geranyltranstransferase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281328|ref|YP_003498146.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
 gi|12513277|gb|AAG54771.1|AE005221_8 geranyltranstransferase (farnesyldiphosphate synthase) [Escherichia
           coli O157:H7 str. EDL933]
 gi|13359932|dbj|BAB33898.1| geranyltranstransferase [Escherichia coli O157:H7 str. Sakai]
 gi|187768276|gb|EDU32120.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4196]
 gi|188015849|gb|EDU53971.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4113]
 gi|188999339|gb|EDU68325.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4076]
 gi|189356028|gb|EDU74447.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4401]
 gi|189362401|gb|EDU80820.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4486]
 gi|189367958|gb|EDU86374.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4501]
 gi|189373540|gb|EDU91956.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC869]
 gi|189377422|gb|EDU95838.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC508]
 gi|208727405|gb|EDZ77006.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4206]
 gi|208732590|gb|EDZ81278.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4045]
 gi|208737148|gb|EDZ84832.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4042]
 gi|209159120|gb|ACI36553.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC4115]
 gi|209744014|gb|ACI70314.1| geranyltranstransferase [Escherichia coli]
 gi|209744016|gb|ACI70315.1| geranyltranstransferase [Escherichia coli]
 gi|209744018|gb|ACI70316.1| geranyltranstransferase [Escherichia coli]
 gi|209744020|gb|ACI70317.1| geranyltranstransferase [Escherichia coli]
 gi|209744022|gb|ACI70318.1| geranyltranstransferase [Escherichia coli]
 gi|217322465|gb|EEC30889.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14588]
 gi|254591005|gb|ACT70366.1| geranyltranstransferase [Escherichia coli O157:H7 str. TW14359]
 gi|290761201|gb|ADD55162.1| Geranyltranstransferase [Escherichia coli O55:H7 str. CB9615]
 gi|320192835|gb|EFW67475.1| geranyltranstransferase [Escherichia coli O157:H7 str. EC1212]
 gi|320638415|gb|EFX08129.1| geranyltranstransferase [Escherichia coli O157:H7 str. G5101]
 gi|320643795|gb|EFX12918.1| geranyltranstransferase [Escherichia coli O157:H- str. 493-89]
 gi|320649146|gb|EFX17724.1| geranyltranstransferase [Escherichia coli O157:H- str. H 2687]
 gi|320656039|gb|EFX23955.1| geranyltranstransferase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320661189|gb|EFX28620.1| geranyltranstransferase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665165|gb|EFX32258.1| geranyltranstransferase [Escherichia coli O157:H7 str. LSU-61]
 gi|326341183|gb|EGD64975.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1044]
 gi|326346042|gb|EGD69781.1| geranyltranstransferase [Escherichia coli O157:H7 str. 1125]
          Length = 299

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
           PC184]
 gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
           PC184]
          Length = 294

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AETAMPAKLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSAETMAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|114569399|ref|YP_756079.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10]
 gi|114339861|gb|ABI65141.1| farnesyl-diphosphate synthase [Maricaulis maris MCS10]
          Length = 295

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 96/235 (40%), Positives = 139/235 (59%), Gaps = 8/235 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                +L E++ R+   LD LL +            L SA+RYA LG GK++R FL  E 
Sbjct: 2   ENFEQRLNEHADRVTVALDALLPRAEGP-----EAHLNSAMRYAALGPGKRLRPFLTIEA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L + +    LR   A+ECIH YSLIHDDLP MD+  +RRG+PTVH  YDE TA++AG+
Sbjct: 57  GHLVHADERGVLRAACALECIHAYSLIHDDLPCMDDDDMRRGRPTVHKAYDEATAVLAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           GL + A+EI++ P T  + ++R++L+  L+   G  GM+GGQM+DI+ E    D + V  
Sbjct: 117 GLQSIAYEILAHPDTHQRGSVRARLVERLSRASGPYGMVGGQMIDIRAETEQFDISVVTR 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           + +MKTGAL+ +A E+  I+       +  L  F  +LG+ +Q+ DDLLD   D 
Sbjct: 177 MHRMKTGALISYAVEAATILKDVDDPVRRALEGFAHDLGLAYQITDDLLDATGDE 231


>gi|257455692|ref|ZP_05620921.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60]
 gi|257446975|gb|EEV21989.1| geranyltranstransferase [Enhydrobacter aerosaccus SK60]
          Length = 319

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 16/233 (6%)

Query: 18  TILDDLLLQTASHMQT-QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA--- 72
            ++D L     +++Q  +    L  A  YA+  GGK++R  LV    +    ++  A   
Sbjct: 27  QVIDQLESDITAYLQACKLPSPLHEASLYAMTNGGKRVRPLLVAATFATVKTDNSLANPS 86

Query: 73  -------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R   A+EC+H YSL+HDDLP MD+  +RRG+PT HI Y E  A++AG+ L T
Sbjct: 87  HQLSNDVRRAMMAVECLHGYSLVHDDLPCMDDDALRRGRPTTHIAYGEAAAMLAGDVLQT 146

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
            AFE ++   T   +N      LS T     + M+ GQMLD+  E   + +T++  I + 
Sbjct: 147 LAFEALT--HTYFGENSEFATPLSATFAPRARRMVMGQMLDLNGEHQQLSQTELEAIHRD 204

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KTGAL+  +   GAI A+A+ +E++ L  F + +G+ FQ+ DD+LD   D  +
Sbjct: 205 KTGALIEASVLMGAICANATDSERQALSSFAQQIGLAFQVQDDILDVTADTEQ 257


>gi|157146963|ref|YP_001454282.1| geranyltranstransferase [Citrobacter koseri ATCC BAA-895]
 gi|157084168|gb|ABV13846.1| hypothetical protein CKO_02740 [Citrobacter koseri ATCC BAA-895]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ   ++ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFSQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  RMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   +    +  
Sbjct: 117 LQTLAFSIISDAPMPEVADRDRIAMISELANASGIAGMCGGQALDLAAEGKQVPLEALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A  +  N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGENGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 295

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 76/239 (31%), Positives = 128/239 (53%), Gaps = 13/239 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +    +  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L        
Sbjct: 4   AYQASSQARVNAALETLFSAPSPELA-----RLYEAMRYSVMNGGKRVRPLLAYAACEAL 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A     A+E IH YSL+HDDLP+MD+  +RRG+PT H Q+DE  AI+AG+GL +
Sbjct: 59  GGQAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQS 118

Query: 126 YAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
            AF  +  P  +     +R  ++ +L    G  GM+GGQ +D+      +D++ +  + +
Sbjct: 119 LAFTALLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHR 178

Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KTGAL+  +   GA+ +  A+  + + L+ +   +G+ FQ+ DD+LD E D   L K+
Sbjct: 179 HKTGALIEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKR 237


>gi|194432565|ref|ZP_03064851.1| geranyltranstransferase [Shigella dysenteriae 1012]
 gi|194419126|gb|EDX35209.1| geranyltranstransferase [Shigella dysenteriae 1012]
 gi|332086043|gb|EGI91207.1| geranyltranstransferase [Shigella dysenteriae 155-74]
 gi|332094575|gb|EGI99621.1| geranyltranstransferase [Shigella boydii 5216-82]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDSDMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|168240246|ref|ZP_02665178.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194445849|ref|YP_002039665.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450485|ref|YP_002044458.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|200390075|ref|ZP_03216686.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|194404512|gb|ACF64734.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408789|gb|ACF69008.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|199602520|gb|EDZ01066.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205339956|gb|EDZ26720.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    + +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   I    +  
Sbjct: 117 LQTLAFAIISDAPMPEVTDRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|254293553|ref|YP_003059576.1| polyprenyl synthetase [Hirschia baltica ATCC 49814]
 gi|254042084|gb|ACT58879.1| Polyprenyl synthetase [Hirschia baltica ATCC 49814]
          Length = 303

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 9/237 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
                 L E + ++  +LD  +             +L+ A+R+ AL GGK++R F+  E 
Sbjct: 9   ASFEQSLAECADKVTVVLDKFIPSAIGP-----EAQLMRAMRHGALAGGKRLRPFITIEV 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LF+    + LR  +A+EC+H YSL+HDDLP MD+  +RRG PTVH  +DE TA++AG+
Sbjct: 64  GRLFDAPEKSLLRAASALECVHAYSLVHDDLPCMDDDDLRRGLPTVHKAFDEATAVLAGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VF 178
            L   AFEI+++ +T     +R +L+  L  + G +GM+GGQM+D+   F D+     + 
Sbjct: 124 ALQALAFEILANTETHGDAGVRCKLIEVLALSSGARGMVGGQMIDMAPSFDDKDALNILA 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q+MKTGAL+  A E GAI+  A+++E + L  F  +LG+ +Q+ DDLLD + D  
Sbjct: 184 RMQRMKTGALISCAAEFGAIIGGANEHEHQALAGFTTDLGLAYQIKDDLLDVQGDEA 240


>gi|333008616|gb|EGK28084.1| geranyltranstransferase [Shigella flexneri VA-6]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P + +   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQFEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|297787795|pdb|3MZV|A Chain A, Crystal Structure Of A Decaprenyl Diphosphate Synthase
           From Rhodobacter Capsulatus
 gi|297787796|pdb|3MZV|B Chain B, Crystal Structure Of A Decaprenyl Diphosphate Synthase
           From Rhodobacter Capsulatus
          Length = 341

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L   L E+   ++ ++ + +    +    +    L+ A      GGK++R  L    A
Sbjct: 12  DRLAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEA------GGKRLRPMLTLAAA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  RLVGYGGPFHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +F++++        N+R   +L+    +  +G +  Q+   Q+    E     + +
Sbjct: 124 LFARSFQLMTDTG-----NMRVMEILANASAVIAEGEVL-QLTAAQNLATTEDIYLRVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT AL   A E G I+  A +++ + L  +G+ LGI FQ+ DDLLD   
Sbjct: 178 GKTAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGG 227


>gi|323938606|gb|EGB34855.1| polyprenyl synthetase [Escherichia coli E1520]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A          L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGCRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|84683979|ref|ZP_01011881.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84667732|gb|EAQ14200.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Rhodobacterales bacterium HTCC2654]
          Length = 331

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 115/229 (50%), Gaps = 16/229 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L+++  ++D ++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 13  LAAHLKDDLSQVDEMI-------RARMASEHAPRIPEVTAHLVDAGGKRLRPMLTLASAR 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L        + +  A+E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 66  LCGYEGGHHIHLATAVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +F++++       D++R   +LS       +G +  Q+   QD    E   F + + 
Sbjct: 124 FARSFQLMTEA-----DSLRVLQVLSNASATITEGEVL-QLTAAQDLGTTEDTYFKVVRG 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT AL   A E G I+A  S++  + L  +G+ LGI FQ+ DDLLD   
Sbjct: 178 KTAALFAAATEVGGILAGVSEDRIKALHDYGDALGIAFQVVDDLLDFWG 226


>gi|226329091|ref|ZP_03804609.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198]
 gi|225202277|gb|EEG84631.1| hypothetical protein PROPEN_02994 [Proteus penneri ATCC 35198]
          Length = 310

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 93/244 (38%), Positives = 128/244 (52%), Gaps = 13/244 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
                 KL    +R+D  L+  L           +  L  A+ Y ALLGGK++R FLV  
Sbjct: 8   TDAFRHKLDSAHQRVDDALNQALSAL-----PFTDMPLGKAMHYGALLGGKRLRPFLVYA 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F V  L      AAIECIH YSLIHDDLP+MD+  +RRGKPT HI++ E  AI+AG
Sbjct: 63  VGEMFKVPALNLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGKPTCHIEFGEANAILAG 122

Query: 121 NGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           + L   AFEI++ +P   +    R  ++  L    GL GM GGQ LD   +D+ ID   +
Sbjct: 123 DALQALAFEILAKNPMPDVAITDRVAMIAELATASGLAGMCGGQALDLEAEDKSIDLASL 182

Query: 178 FMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDC---EED 233
             I   KTGAL+  A   GA  A +   +    L  +  ++G+ FQ+ DD+LD     E+
Sbjct: 183 EKIHLHKTGALIRAAVRLGAFSAGSKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEE 242

Query: 234 LPKK 237
             K+
Sbjct: 243 TGKR 246


>gi|152979918|ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
 gi|151279995|gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille]
          Length = 280

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 6/218 (2%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L L        Q   RL  A+ YA+L GGK++R  LV    +LF+ +     R  AA+E
Sbjct: 2   ELALVQHLPPVAQTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAVE 61

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSL+HDD+P MD+  +RRGKPTVH++YDE  A++ G+ L + AF++++     L  
Sbjct: 62  MIHAYSLVHDDMPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGG--LDP 119

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI 198
             +  ++  L    G  GM GGQ +D+      +   ++  + ++KTGAL+  +   GA+
Sbjct: 120 VRQLAMVRLLAKASGSLGMCGGQAIDLASVGLSLSLEELEQMHRLKTGALLRVSVLLGAL 179

Query: 199 MAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              A S  E + L  +   +G+ FQ+ DD+LD   D  
Sbjct: 180 AGKALSAEETQALDSYAAAIGLAFQVVDDVLDATADSA 217


>gi|16763803|ref|NP_459418.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56414422|ref|YP_151497.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161615389|ref|YP_001589354.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167551766|ref|ZP_02345519.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167992273|ref|ZP_02573371.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168232396|ref|ZP_02657454.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237536|ref|ZP_02662594.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168261144|ref|ZP_02683117.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168465513|ref|ZP_02699395.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194471326|ref|ZP_03077310.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194737792|ref|YP_002113456.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197248755|ref|YP_002145405.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264786|ref|ZP_03164860.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197363342|ref|YP_002142979.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198246235|ref|YP_002214377.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204927283|ref|ZP_03218485.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|224582261|ref|YP_002636059.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911444|ref|ZP_04655281.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|16418928|gb|AAL19377.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56128679|gb|AAV78185.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161364753|gb|ABX68521.1| hypothetical protein SPAB_03160 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194457690|gb|EDX46529.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194713294|gb|ACF92515.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195631861|gb|EDX50381.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197094819|emb|CAR60352.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197212458|gb|ACH49855.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243041|gb|EDY25661.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289586|gb|EDY28949.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197940751|gb|ACH78084.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204323948|gb|EDZ09143.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323424|gb|EDZ11263.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205329490|gb|EDZ16254.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205333490|gb|EDZ20254.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205349921|gb|EDZ36552.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|224466788|gb|ACN44618.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245706|emb|CBG23502.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992135|gb|ACY87020.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157034|emb|CBW16517.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911456|dbj|BAJ35430.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225151|gb|EFX50212.1| Geranyltranstransferase farnesyldiphosphate synthase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322614703|gb|EFY11632.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618809|gb|EFY15697.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623516|gb|EFY20355.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629186|gb|EFY25965.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631906|gb|EFY28660.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637357|gb|EFY34059.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642042|gb|EFY38652.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647861|gb|EFY44336.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322652539|gb|EFY48893.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653299|gb|EFY49632.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660552|gb|EFY56788.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664704|gb|EFY60897.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669243|gb|EFY65393.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670788|gb|EFY66921.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678973|gb|EFY75028.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682001|gb|EFY78026.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685170|gb|EFY81167.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323128742|gb|ADX16172.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323194482|gb|EFZ79677.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196981|gb|EFZ82123.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323203966|gb|EFZ88983.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323206949|gb|EFZ91902.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210833|gb|EFZ95705.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214524|gb|EFZ99275.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223081|gb|EGA07424.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323227030|gb|EGA11211.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230152|gb|EGA14272.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233890|gb|EGA17979.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238416|gb|EGA22474.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244104|gb|EGA28113.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323246264|gb|EGA30247.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323251890|gb|EGA35753.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323257887|gb|EGA41566.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261100|gb|EGA44692.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264970|gb|EGA48469.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272533|gb|EGA55940.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326622125|gb|EGE28470.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332987371|gb|AEF06354.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    + +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   I    +  
Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|323965104|gb|EGB60563.1| polyprenyl synthetase [Escherichia coli M863]
 gi|327254743|gb|EGE66359.1| geranyltranstransferase [Escherichia coli STEC_7v]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+EC+H YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECVHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIGGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPILDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|308180453|ref|YP_003924581.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308045944|gb|ADN98487.1| geranyltranstransferase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 296

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 1   MNGGLPSKLQENSK-RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV 58
           MN  L ++ +   + +I+  LD+ L   +          L  A+RY+ L GGK++R  L 
Sbjct: 1   MNKQLLTEFESKWRPQINQYLDEQLQACSD------QSTLTDAMRYSVLAGGKRLRPLLT 54

Query: 59  TECASLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                 F++    A LR   A+E +H YSLIHDDLP+MDN  +RRG+PT H+++ E  AI
Sbjct: 55  LAILDTFDITTTAANLRASVAVELMHTYSLIHDDLPAMDNDQLRRGEPTNHVKFGEDVAI 114

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           +AG+ L    FE I+   + L  +I +   L+L    G +GM+ GQ+ D+    + +   
Sbjct: 115 LAGDALQPLTFEWIAD--SGLPASIVANQTLALAQATGPRGMVAGQIADVLGAGQHLALP 172

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  + + KTGAL+ +A ++G I A      +E L  + +  G+ FQ+ DD+LD   
Sbjct: 173 ALQQLHREKTGALIHYAVQAGLIQAQVQPAVQELLLQYADAYGLAFQIYDDILDVTS 229


>gi|16128406|ref|NP_414955.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
 gi|74310990|ref|YP_309409.1| geranyltranstransferase [Shigella sonnei Ss046]
 gi|82775670|ref|YP_402017.1| geranyltranstransferase [Shigella dysenteriae Sd197]
 gi|89107291|ref|AP_001071.1| geranyltranstransferase [Escherichia coli str. K-12 substr. W3110]
 gi|170080007|ref|YP_001729327.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
 gi|170683582|ref|YP_001742558.1| geranyltranstransferase [Escherichia coli SMS-3-5]
 gi|187730884|ref|YP_001879130.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
 gi|188492835|ref|ZP_03000105.1| geranyltranstransferase [Escherichia coli 53638]
 gi|191166720|ref|ZP_03028547.1| geranyltranstransferase [Escherichia coli B7A]
 gi|194438870|ref|ZP_03070955.1| geranyltranstransferase [Escherichia coli 101-1]
 gi|209917634|ref|YP_002291718.1| geranyltranstransferase [Escherichia coli SE11]
 gi|218698670|ref|YP_002406299.1| geranyltranstransferase [Escherichia coli IAI39]
 gi|218703704|ref|YP_002411223.1| geranyltranstransferase [Escherichia coli UMN026]
 gi|238899709|ref|YP_002925505.1| geranyltranstransferase [Escherichia coli BW2952]
 gi|253774594|ref|YP_003037425.1| geranyltranstransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160487|ref|YP_003043595.1| geranyltranstransferase [Escherichia coli B str. REL606]
 gi|256020388|ref|ZP_05434253.1| geranyltranstransferase [Shigella sp. D9]
 gi|256023962|ref|ZP_05437827.1| geranyltranstransferase [Escherichia sp. 4_1_40B]
 gi|293403541|ref|ZP_06647632.1| geranyltranstransferase [Escherichia coli FVEC1412]
 gi|293413676|ref|ZP_06656325.1| geranyltranstransferase [Escherichia coli B185]
 gi|297518956|ref|ZP_06937342.1| geranyltranstransferase [Escherichia coli OP50]
 gi|298379153|ref|ZP_06989034.1| geranyltranstransferase [Escherichia coli FVEC1302]
 gi|300900489|ref|ZP_07118656.1| polyprenyl synthetase [Escherichia coli MS 198-1]
 gi|300918198|ref|ZP_07134805.1| polyprenyl synthetase [Escherichia coli MS 115-1]
 gi|300930283|ref|ZP_07145696.1| polyprenyl synthetase [Escherichia coli MS 187-1]
 gi|300947928|ref|ZP_07162076.1| polyprenyl synthetase [Escherichia coli MS 116-1]
 gi|300957986|ref|ZP_07170151.1| polyprenyl synthetase [Escherichia coli MS 175-1]
 gi|301022588|ref|ZP_07186460.1| polyprenyl synthetase [Escherichia coli MS 69-1]
 gi|301025692|ref|ZP_07189208.1| polyprenyl synthetase [Escherichia coli MS 196-1]
 gi|301647344|ref|ZP_07247156.1| polyprenyl synthetase [Escherichia coli MS 146-1]
 gi|307137064|ref|ZP_07496420.1| geranyltranstransferase [Escherichia coli H736]
 gi|309787014|ref|ZP_07681626.1| geranyltranstransferase [Shigella dysenteriae 1617]
 gi|309794853|ref|ZP_07689274.1| polyprenyl synthetase [Escherichia coli MS 145-7]
 gi|312970516|ref|ZP_07784697.1| geranyltranstransferase [Escherichia coli 1827-70]
 gi|331640938|ref|ZP_08342073.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H736]
 gi|331651356|ref|ZP_08352381.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli M718]
 gi|331661799|ref|ZP_08362722.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA143]
 gi|331671966|ref|ZP_08372762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA280]
 gi|332281567|ref|ZP_08393980.1| geranyltranstransferase [Shigella sp. D9]
 gi|124931|sp|P22939|ISPA_ECOLI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|46015527|pdb|1RQJ|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
           Bound To Isopentyl Pyrophosphate And Risedronate
 gi|46015528|pdb|1RQJ|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
           Bound To Isopentyl Pyrophosphate And Risedronate
 gi|216584|dbj|BAA00599.1| farnesyl diphosphate synthase [Escherichia coli]
 gi|1773105|gb|AAB40177.1| geranyltransperase [Escherichia coli]
 gi|1786623|gb|AAC73524.1| geranyltranstransferase [Escherichia coli str. K-12 substr. MG1655]
 gi|73854467|gb|AAZ87174.1| geranyltranstransferase [Shigella sonnei Ss046]
 gi|81239818|gb|ABB60528.1| geranyltranstransferase [Shigella dysenteriae Sd197]
 gi|85674561|dbj|BAE76201.1| geranyltranstransferase [Escherichia coli str. K12 substr. W3110]
 gi|169887842|gb|ACB01549.1| geranyltranstransferase [Escherichia coli str. K-12 substr. DH10B]
 gi|170521300|gb|ACB19478.1| geranyltranstransferase [Escherichia coli SMS-3-5]
 gi|187427876|gb|ACD07150.1| geranyltranstransferase [Shigella boydii CDC 3083-94]
 gi|188488034|gb|EDU63137.1| geranyltranstransferase [Escherichia coli 53638]
 gi|190903231|gb|EDV62953.1| geranyltranstransferase [Escherichia coli B7A]
 gi|194422164|gb|EDX38166.1| geranyltranstransferase [Escherichia coli 101-1]
 gi|209910893|dbj|BAG75967.1| geranyltranstransferase [Escherichia coli SE11]
 gi|218368656|emb|CAR16395.1| geranyltranstransferase [Escherichia coli IAI39]
 gi|218430801|emb|CAR11675.1| geranyltranstransferase [Escherichia coli UMN026]
 gi|238861298|gb|ACR63296.1| geranyltranstransferase [Escherichia coli BW2952]
 gi|242376199|emb|CAQ30890.1| farnesyl diphosphate synthase / geranyl diphosphate synthase
           [Escherichia coli BL21(DE3)]
 gi|253325638|gb|ACT30240.1| Polyprenyl synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972388|gb|ACT38059.1| geranyltranstransferase [Escherichia coli B str. REL606]
 gi|253976598|gb|ACT42268.1| geranyltranstransferase [Escherichia coli BL21(DE3)]
 gi|260450392|gb|ACX40814.1| Polyprenyl synthetase [Escherichia coli DH1]
 gi|284920231|emb|CBG33290.1| geranyltranstransferase [Escherichia coli 042]
 gi|291429394|gb|EFF02414.1| geranyltranstransferase [Escherichia coli FVEC1412]
 gi|291433734|gb|EFF06707.1| geranyltranstransferase [Escherichia coli B185]
 gi|298280266|gb|EFI21770.1| geranyltranstransferase [Escherichia coli FVEC1302]
 gi|299880004|gb|EFI88215.1| polyprenyl synthetase [Escherichia coli MS 196-1]
 gi|300315322|gb|EFJ65106.1| polyprenyl synthetase [Escherichia coli MS 175-1]
 gi|300355970|gb|EFJ71840.1| polyprenyl synthetase [Escherichia coli MS 198-1]
 gi|300397469|gb|EFJ81007.1| polyprenyl synthetase [Escherichia coli MS 69-1]
 gi|300414649|gb|EFJ97959.1| polyprenyl synthetase [Escherichia coli MS 115-1]
 gi|300452528|gb|EFK16148.1| polyprenyl synthetase [Escherichia coli MS 116-1]
 gi|300461855|gb|EFK25348.1| polyprenyl synthetase [Escherichia coli MS 187-1]
 gi|301074489|gb|EFK89295.1| polyprenyl synthetase [Escherichia coli MS 146-1]
 gi|308121506|gb|EFO58768.1| polyprenyl synthetase [Escherichia coli MS 145-7]
 gi|308924592|gb|EFP70087.1| geranyltranstransferase [Shigella dysenteriae 1617]
 gi|309700683|emb|CBI99979.1| geranyltranstransferase [Escherichia coli ETEC H10407]
 gi|310337165|gb|EFQ02303.1| geranyltranstransferase [Escherichia coli 1827-70]
 gi|315135103|dbj|BAJ42262.1| geranyltranstransferase [Escherichia coli DH1]
 gi|320201662|gb|EFW76238.1| geranyltranstransferase [Escherichia coli EC4100B]
 gi|323164212|gb|EFZ50019.1| geranyltranstransferase [Shigella sonnei 53G]
 gi|323170503|gb|EFZ56153.1| geranyltranstransferase [Escherichia coli LT-68]
 gi|323943227|gb|EGB39383.1| polyprenyl synthetase [Escherichia coli E482]
 gi|323963407|gb|EGB58969.1| polyprenyl synthetase [Escherichia coli H489]
 gi|323972271|gb|EGB67481.1| polyprenyl synthetase [Escherichia coli TA007]
 gi|324016723|gb|EGB85942.1| polyprenyl synthetase [Escherichia coli MS 117-3]
 gi|331037736|gb|EGI09956.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli H736]
 gi|331051097|gb|EGI23149.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli M718]
 gi|331060221|gb|EGI32185.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA143]
 gi|331070955|gb|EGI42314.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Escherichia coli TA280]
 gi|332103919|gb|EGJ07265.1| geranyltranstransferase [Shigella sp. D9]
 gi|332341784|gb|AEE55118.1| geranyltranstransferase IspA [Escherichia coli UMNK88]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|293408568|ref|ZP_06652407.1| geranyltranstransferase [Escherichia coli B354]
 gi|291471746|gb|EFF14229.1| geranyltranstransferase [Escherichia coli B354]
          Length = 299

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S      + D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPKVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|188994672|ref|YP_001928924.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188594352|dbj|BAG33327.1| probable isoprenyl synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 325

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 17/227 (7%)

Query: 20  LDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           L +++ Q  +      +  D L   I Y L LGGK++R  L      +F  ++  AL V 
Sbjct: 7   LREIIEQEIASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVA 66

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGK TVH ++ + TAI++G+ +   A+E ++   +
Sbjct: 67  MAIETYHNFTLLHDDL--MDKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDS 124

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
                 R   +L    N     +  GQ  D+  E  D   E +   + ++KT  L+  A 
Sbjct: 125 ------RLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATAL 178

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI   A   + + L  +G ++G+ FQL DDLLD   D   L KK
Sbjct: 179 KMGAIAGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKK 225


>gi|91215079|ref|ZP_01252051.1| putative isoprenoid biosynthesis related protein [Psychroflexus
           torquis ATCC 700755]
 gi|91186684|gb|EAS73055.1| putative isoprenoid biosynthesis related protein [Psychroflexus
           torquis ATCC 700755]
          Length = 324

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 12/222 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ++      L    + +  +    L   I Y L LGGK++R  LV   A +F      A+ 
Sbjct: 4   LEAYKLSFLEYMEAQVPKKEPRNLYEPIEYILGLGGKRLRPVLVLMSADIFGGGREKAMD 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE  H +SL+HDD+  MD+  +RRG+ TVH +++  T I++G+ +L  A+++  + 
Sbjct: 64  AALAIEIFHNFSLVHDDI--MDDAPLRRGQQTVHEKWNINTGILSGDAMLINAYQLFENY 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191
             +          L+         +  GQ  D+  E  D+    +   + + KT  L+  
Sbjct: 122 PAEHFKP------LAELFTKTAIEVCEGQQYDVDFEERDDVTIEEYLKMIEYKTAVLVGA 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A + GAI++  SQN + ++  FG  LGI FQ+ DD LD   +
Sbjct: 176 ALKMGAILSDVSQNVQNKIYEFGRLLGIAFQIQDDYLDTFGE 217


>gi|238022826|ref|ZP_04603252.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147]
 gi|237866029|gb|EEP67165.1| hypothetical protein GCWU000324_02743 [Kingella oralis ATCC 51147]
          Length = 324

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 115/228 (50%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L+ +  R++ +++  + Q+   + +Q    ++SA      GGK++R  L       
Sbjct: 8   FQQNLETDLSRVNVVINRAV-QSEVALISQIGTYIISA------GGKRLRPILTILAGKC 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  LGCDSDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     ++   +++   NI  +G +  Q+++I +  I ET+   + + K
Sbjct: 119 TRAFQLMVGSGS-----LKILEVMAEATNIIAEGEVM-QLMNIGNTEISETEYLQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GAI+A A+  +++ L+ +G ++G  FQ+ DD+LD   
Sbjct: 173 TAKLFEAAAQVGAILAGATSGQEQALKDYGAHIGTAFQIIDDVLDYSG 220


>gi|261379260|ref|ZP_05983833.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703]
 gi|284797691|gb|EFC53038.1| octaprenyl-diphosphate synthase [Neisseria subflava NJ9703]
          Length = 324

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 115/235 (48%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L ++  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPDDLAKVNAVINQAV-QSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYVQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD     E++ K
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGK 227


>gi|294674496|ref|YP_003575112.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola
           23]
 gi|294472118|gb|ADE81507.1| short chain isoprenyl diphosphate synthase [Prevotella ruminicola
           23]
          Length = 324

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 70/228 (30%), Positives = 116/228 (50%), Gaps = 19/228 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           ++  K+++  LD+L+         +    L   I+Y L +GGK++R  L     +L+  +
Sbjct: 5   EDLLKKVNEALDNLVYD-------RQPASLYDPIKYVLSIGGKRVRPVLTMLAYNLYKDD 57

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            L+ +     +E  H ++L+HDDL  MD+  +RRG  TVH ++D   AI++G+ +L  AF
Sbjct: 58  PLSIMSQALGLETYHNFTLLHDDL--MDHADMRRGHETVHKKWDANRAILSGDTMLLQAF 115

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKT 185
           E +          +    + +         +  GQ LD++ E    + E +   + ++KT
Sbjct: 116 ERVEDCDPAKLPAVFKVFIQT------TLEIGEGQQLDVEFEQRNDVTEDEYIEMIRLKT 169

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L+  AC+ GAIMA A   + E +  FGE LG+ FQL DDLLD   D
Sbjct: 170 SVLLACACKVGAIMADAPAEDIENMYKFGEKLGLAFQLQDDLLDVYGD 217


>gi|237749261|ref|ZP_04579741.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13]
 gi|229380623|gb|EEO30714.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes OXCC13]
          Length = 329

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 15/231 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
               S +  + + ++ I+ + L      + +Q  + L++A      GGK+IR  LV   A
Sbjct: 11  DSFLSTIAPDMEGVNRIIREQLHSNVPFI-SQIAEYLINA------GGKRIRPALVLLMA 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F         + A IE IH  +L+HDD+  +D   +RRGK + +  +    +++ G+ 
Sbjct: 64  RAFGYQGTQHQMLAAMIEFIHTATLLHDDV--VDEADLRRGKSSANALFGNAASVLVGDF 121

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T AF++I +      +++R   +LS   N+  +G +  Q++++++  IDE +   +  
Sbjct: 122 LYTRAFQMIVA-----VNDMRILPVLSDATNLIAEGEVM-QLVNVRNPAIDEKRYMEVIY 175

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT  L   +   GA++AHAS+ E E    +G +LGI FQL DDLLD   +
Sbjct: 176 AKTARLFEVSAVLGALIAHASEKEIEAAAAYGRSLGIAFQLVDDLLDYAGE 226


>gi|294678700|ref|YP_003579315.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003]
 gi|77862362|gb|ABB04465.1| decaprenyl diphosphate synthase [Rhodobacter capsulatus]
 gi|294477520|gb|ADE86908.1| octaprenyl-diphosphate synthase [Rhodobacter capsulatus SB 1003]
          Length = 333

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L   L E+   ++ ++ + +    +    +    L+ A      GGK++R  L    A
Sbjct: 12  DRLAQALAEDMAAVNALIRERMSSEHAPRIPEVTAHLIEA------GGKRLRPMLTLAAA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  RLVGYGGPFHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +F++++        N+R   +L+    +  +G +  Q+   Q+    E     + +
Sbjct: 124 LFARSFQLMTDTG-----NMRVMEILANASAVIAEGEVL-QLTAAQNLATTEDIYLRVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT AL   A E G I+  A +++ + L  +G+ LGI FQ+ DDLLD   
Sbjct: 178 GKTAALFSAATEVGGIIGGAPEDQVQALFDYGDALGIAFQIVDDLLDYGG 227


>gi|218768956|ref|YP_002343468.1| geranyltranstransferase [Neisseria meningitidis Z2491]
 gi|121052964|emb|CAM09318.1| geranyltranstransferase [Neisseria meningitidis Z2491]
 gi|319411254|emb|CBY91661.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
           synthase) [Neisseria meningitidis WUE 2594]
          Length = 298

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 130/238 (54%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H++Y E TA++ G
Sbjct: 59  ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L T AF+++S P T+L    +  ++  L    G  GM GGQ +D+ +  + + +T + 
Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMAQTDLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|325498296|gb|EGC96155.1| geranyltranstransferase [Escherichia fergusonii ECD227]
          Length = 299

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELAGASGIGGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|24111799|ref|NP_706309.1| geranyltranstransferase [Shigella flexneri 2a str. 301]
 gi|30061915|ref|NP_836086.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
 gi|24050587|gb|AAN42016.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
           flexneri 2a str. 301]
 gi|30040159|gb|AAP15892.1| geranyltranstransferase (farnesyldiphosphate synthase) [Shigella
           flexneri 2a str. 2457T]
 gi|281599753|gb|ADA72737.1| Geranyltranstransferase [Shigella flexneri 2002017]
 gi|313646962|gb|EFS11419.1| geranyltranstransferase [Shigella flexneri 2a str. 2457T]
 gi|332760701|gb|EGJ90989.1| geranyltranstransferase [Shigella flexneri 4343-70]
 gi|332761685|gb|EGJ91964.1| geranyltranstransferase [Shigella flexneri 2747-71]
 gi|332764298|gb|EGJ94534.1| geranyltranstransferase [Shigella flexneri K-671]
 gi|332768526|gb|EGJ98709.1| geranyltranstransferase [Shigella flexneri 2930-71]
 gi|333007813|gb|EGK27289.1| geranyltranstransferase [Shigella flexneri K-218]
 gi|333021995|gb|EGK41240.1| geranyltranstransferase [Shigella flexneri K-304]
          Length = 299

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|139473477|ref|YP_001128193.1| geranyltranstransferase [Streptococcus pyogenes str. Manfredo]
 gi|134271724|emb|CAM29957.1| putative geranyltranstransferase [Streptococcus pyogenes str.
           Manfredo]
          Length = 290

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 9/226 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--IQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD++ E    +   +  I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQSLSLSQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++ A++   +   +++L   G  +G  FQ+ DD+LD     EDL K
Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTASFEDLGK 228


>gi|320173761|gb|EFW48944.1| geranyltranstransferase [Shigella dysenteriae CDC 74-1112]
          Length = 299

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLNALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|34540567|ref|NP_905046.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
 gi|34396880|gb|AAQ65945.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
          Length = 325

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 17/227 (7%)

Query: 20  LDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           L +++ Q  +      +  D L   I Y L LGGK++R  L      +F  ++  AL V 
Sbjct: 7   LREIIEQEIASQPYDQRKPDGLFQPISYILRLGGKRVRPTLACIACEMFGGDYKPALEVA 66

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H ++L+HDDL  MD   +RRGK TVH ++ + TAI++G+ +   A+E ++   +
Sbjct: 67  MAIETYHNFTLLHDDL--MDKSSMRRGKETVHHRWGDNTAILSGDAMTVAAYEHLAKVDS 124

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
                 R   +L    N     +  GQ  D+  E  D   E +   + ++KT  L+  A 
Sbjct: 125 ------RLLPVLLPLFNRMAMEICQGQQYDMDFERRDFVAEDEYLEMIRLKTAVLLATAL 178

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GAI   A   + + L  +G ++G+ FQL DDLLD   D   L KK
Sbjct: 179 KMGAIAGGADIEKADILYRYGIHIGLSFQLEDDLLDVYGDPIILGKK 225


>gi|146299023|ref|YP_001193614.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101]
 gi|146153441|gb|ABQ04295.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101]
          Length = 324

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 15/216 (6%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D L     H   +    L   I Y L LGGK++R  L    A +F+ N+ TAL    A+E
Sbjct: 13  DYLKNQNIH---KEPTNLYEPIEYILGLGGKRMRPVLTLMAAEVFDTNYKTALPAAMAVE 69

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H +SL+HDD+  MD+  +RRG+ TVH ++D  T I++G+ +L  A++     + ++  
Sbjct: 70  VFHNFSLVHDDI--MDDAPLRRGQVTVHEKWDLNTGILSGDAMLILAYQYFEQYEPEVFR 127

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGA 197
           +      L+   +     +  GQ  D+  E    +   +   + + KT  L+  A + GA
Sbjct: 128 D------LAKLFSKTALEVCEGQQWDVDFEQRNNVTIPEYLKMIEYKTAVLVAAAMKMGA 181

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+A  S+ E + +  FG NLG+ FQL DD LD   D
Sbjct: 182 IVAKTSEKEGDLIYDFGLNLGLAFQLQDDYLDAFGD 217


>gi|319639120|ref|ZP_07993876.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102]
 gi|317399597|gb|EFV80262.1| octaprenyl-diphosphate synthase [Neisseria mucosa C102]
          Length = 324

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L ++  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPDDLAKVNAVINQAV-QSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYVQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|228474123|ref|ZP_04058864.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274637|gb|EEK13478.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
          Length = 323

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + I    ++ +     H++ +    L   I Y L +GGK++R  L    A +F  ++  A
Sbjct: 2   QLITDYQNEFVAFMQEHLKERDPKNLYDPIHYILNVGGKRLRPTLTMLSADIFGTDYHKA 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E  H +SL+HDD+  MD   +RRG PTVH +++  T I++G+ +L  A++   
Sbjct: 62  LYAALAVEIFHNFSLVHDDI--MDAAPLRRGHPTVHTKWNLNTGILSGDTMLILAYQYFE 119

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM 189
             +  +         L+   +     +  GQ  D+  E    +   Q   +   KT  L+
Sbjct: 120 QYEPNIFQE------LAKIFSKTAIEVCEGQQYDVDFEQQAQVSTDQYLKMIAYKTAVLV 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
             A + GAI+A  ++  K+++  FG  LGI +QL DD LD   D    KK
Sbjct: 174 GAALQMGAIIAQTTEENKQKIYDFGLALGIAYQLQDDYLDTFGDASFGKK 223


>gi|91209490|ref|YP_539476.1| geranyltranstransferase [Escherichia coli UTI89]
 gi|218557330|ref|YP_002390243.1| geranyltranstransferase [Escherichia coli S88]
 gi|237707585|ref|ZP_04538066.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
 gi|91071064|gb|ABE05945.1| geranyltranstransferase [Escherichia coli UTI89]
 gi|218364099|emb|CAR01764.1| geranyltranstransferase [Escherichia coli S88]
 gi|222032216|emb|CAP74955.1| Geranyltranstransferase [Escherichia coli LF82]
 gi|226898795|gb|EEH85054.1| geranyltranstransferase [Escherichia sp. 3_2_53FAA]
 gi|294493422|gb|ADE92178.1| geranyltranstransferase [Escherichia coli IHE3034]
 gi|307628110|gb|ADN72414.1| geranyltranstransferase [Escherichia coli UM146]
 gi|312944998|gb|ADR25825.1| geranyltranstransferase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315289864|gb|EFU49254.1| polyprenyl synthetase [Escherichia coli MS 110-3]
 gi|323952967|gb|EGB48835.1| polyprenyl synthetase [Escherichia coli H252]
 gi|323958614|gb|EGB54317.1| polyprenyl synthetase [Escherichia coli H263]
          Length = 299

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|237730107|ref|ZP_04560588.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2]
 gi|226908713|gb|EEH94631.1| octaprenyl diphosphate synthase [Citrobacter sp. 30_2]
          Length = 370

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 119/232 (51%), Gaps = 15/232 (6%)

Query: 12  NSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +   D+    A+ ++  ++D +L++ + Y ++  GGK+IR  +    A     
Sbjct: 49  NLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 108

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 109 QENAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 166

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 167 FQMMTSLGS-----LKVLEVMSKAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 220

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           L   A +   I+A  S+ +++ L+ +G  LG  FQL DDLLD   D   L K
Sbjct: 221 LFEAAAQCSGILAGCSEEQEKGLQDYGRYLGTAFQLIDDLLDYSADGEQLGK 272


>gi|22536677|ref|NP_687528.1| geranyltranstransferase [Streptococcus agalactiae 2603V/R]
 gi|25010613|ref|NP_735008.1| hypothetical protein gbs0544 [Streptococcus agalactiae NEM316]
 gi|76787307|ref|YP_329231.1| geranyltranstransferase [Streptococcus agalactiae A909]
 gi|76799070|ref|ZP_00781262.1| geranyltranstransferase [Streptococcus agalactiae 18RS21]
 gi|77405325|ref|ZP_00782421.1| geranyltranstransferase [Streptococcus agalactiae H36B]
 gi|77412376|ref|ZP_00788686.1| geranyltranstransferase [Streptococcus agalactiae CJB111]
 gi|77414020|ref|ZP_00790192.1| geranyltranstransferase [Streptococcus agalactiae 515]
 gi|22533517|gb|AAM99400.1|AE014214_14 geranyltranstransferase, putative [Streptococcus agalactiae
           2603V/R]
 gi|23094967|emb|CAD46188.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76562364|gb|ABA44948.1| geranyltranstransferase [Streptococcus agalactiae A909]
 gi|76585585|gb|EAO62151.1| geranyltranstransferase [Streptococcus agalactiae 18RS21]
 gi|77159946|gb|EAO71085.1| geranyltranstransferase [Streptococcus agalactiae 515]
 gi|77161564|gb|EAO72565.1| geranyltranstransferase [Streptococcus agalactiae CJB111]
 gi|77176120|gb|EAO78893.1| geranyltranstransferase [Streptococcus agalactiae H36B]
 gi|319744560|gb|EFV96913.1| geranyltranstransferase [Streptococcus agalactiae ATCC 13813]
          Length = 290

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGA 77
           +D+ + +      +  +  L+ AI Y++  GGK+IR  ++ E    F V        V A
Sbjct: 7   IDEAIHRYYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAA 66

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRG+ T H ++DE TA++AG+ L    F+++     +
Sbjct: 67  ALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFK 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
               +R   +LS++   G  GM+GGQMLD++ E   +    + +I   KTG L+ +   +
Sbjct: 127 ADVTVRLIELLSMS--AGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFVA 184

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             I+A  S+  K +L   G  +G  FQ+ DD+LD     E+L K
Sbjct: 185 AGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGK 228


>gi|329905263|ref|ZP_08274077.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547655|gb|EGF32446.1| putative octaprenyl-diphosphate synthase protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 243

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 13/218 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           +L+++   H +    +++   I     GGK+IR  LV   A  F  N      + A +E 
Sbjct: 25  NLVIRRQLHSEVALVNQIAEYI--ISAGGKRIRPALVLLMARAFGYNGTHHHDLAAVVEF 82

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ + + AF+++ S      D+
Sbjct: 83  IHTATLLHDDV--VDESSLRRGRQTANALFGNAASVLVGDFVYSRAFQMMVS-----VDD 135

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +R   +LS   N+  +G +  Q+L++ D  + E +   + + KT  L   A + GA++A 
Sbjct: 136 MRVMRILSDATNVIAEGEVL-QLLNMHDPDVTEARYLQVIRSKTAKLFEAAAQLGALVAG 194

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           AS  + E    +G +LG  FQL DD+LD      D+ K
Sbjct: 195 ASAEDVEAAAEYGRSLGTAFQLIDDVLDYSGNASDIGK 232


>gi|222110169|ref|YP_002552433.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
 gi|221729613|gb|ACM32433.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
          Length = 306

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 11/236 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
                 ++    R++  L   +   A          L  A+RYA+L GGK++R  LV   
Sbjct: 15  FDFDGWMRAQLARVEDALSHWVCPDA-------PAGLGEAMRYAVLDGGKRLRPLLVLAA 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 N   ALR   A+E IH YSL+HDD+P MDN  +RRGKPTVH+ + E  A++AG+
Sbjct: 68  CEAVGGNAQAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVPFGEARALLAGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L   AFE++ +P+  +   ++++L   L    G  GM GGQ +D+      + E Q+  
Sbjct: 128 ALQALAFELL-TPEDGVPPAMQARLCRELARAAGADGMAGGQAIDLASVGLQLSEDQLRQ 186

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + ++KTGAL+  +   GA+     +     L  +G  +G+ FQ+ DD+LD  +D  
Sbjct: 187 MHRLKTGALLQASVVMGAVCGQTPEGTLRALSDYGAAMGLAFQVVDDVLDVTQDSA 242


>gi|325267223|ref|ZP_08133886.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394]
 gi|324981284|gb|EGC16933.1| octaprenyl-diphosphate synthase [Kingella denitrificans ATCC 33394]
          Length = 324

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L+ +  R++ +++  +    + +       + S       GGK++R  L       
Sbjct: 8   FQQNLEADLSRVNVVINRAVQSDVALISQIGTYIIGS-------GGKRLRPILTILSGKC 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  LGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     ++   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIGNVDITEQQYLQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GAI+A A   ++  L+ FG  +G  FQ+ DD+LD   
Sbjct: 173 TAKLFEAAAQVGAILAGADDEQERALKEFGMYMGTAFQIVDDVLDYSG 220


>gi|223986292|ref|ZP_03636304.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
           12042]
 gi|223961731|gb|EEF66231.1| hypothetical protein HOLDEFILI_03614 [Holdemania filiformis DSM
           12042]
          Length = 280

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 7/217 (3%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGA 77
           ++++         +      +  A+ Y+L+G GK++R  L+   A  + ++         
Sbjct: 1   MMNEFEAFLQRQCRLLKRSEVSEAMEYSLMGKGKRLRPQLLFAVAEGYGLSAQAGFMAAG 60

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H YSLIHDDLP+MDN   RRG+ T H Q++E TAI+AG+GLLT AF + ++    
Sbjct: 61  ALEMMHTYSLIHDDLPAMDNDDYRRGRKTCHKQFNEATAILAGDGLLTQAFVLAANSSDD 120

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACE 194
               ++   +  L    G +GM+ GQ+ D++ E    +   Q+  +   KTG L      
Sbjct: 121 PVKALKI--VKELASAGGAEGMILGQIKDLEAENSQAVTLEQLKEVHLYKTGCLFTAPLV 178

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            GAI+A        + R  G  +G+ FQ+ DD+LD  
Sbjct: 179 MGAILAGQDAA-IPQWRRIGALMGLAFQIQDDILDVT 214


>gi|320181597|gb|EFW56512.1| geranyltranstransferase [Shigella boydii ATCC 9905]
          Length = 299

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T      A+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPATAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDSDMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|261378364|ref|ZP_05982937.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685]
 gi|269145472|gb|EEZ71890.1| octaprenyl-diphosphate synthase [Neisseria cinerea ATCC 14685]
          Length = 324

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 116/235 (49%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQKHLSEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGRS 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              ++     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E +   + + K
Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEEYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T  L   A + G+I+ +A    ++ L+ +G  +G  FQ+ DD+LD     E++ K
Sbjct: 173 TAKLFEAAAQVGSILGNAPPECEQALKDYGMYVGTAFQIIDDVLDYSGETEEIGK 227


>gi|224825912|ref|ZP_03699016.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
 gi|224602136|gb|EEG08315.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
          Length = 298

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 9/225 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           N      +    + ++  L  LL    S        RL  A+RY+ L GGK++R  LV  
Sbjct: 3   NDNFIGWMTGIQQTMEDALARLLPNPESA-----PQRLHEAMRYSTLDGGKRVRPLLVHA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L + N     R+GAA+E IH YSL+HDD+P MD+  +RRGKPT H+ +D+ TA++ G
Sbjct: 58  AGELVSANPEHLARIGAAVEMIHAYSLVHDDMPCMDDDVLRRGKPTCHVAFDDATALLVG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           + L T AF+++++P   +    + +++ +L    G  GM GGQ +D+    + +   ++ 
Sbjct: 118 DALQTLAFDVLATPLDGVAAAAQLEMVRTLARASGHGGMAGGQAIDLASVGQTLSLPELE 177

Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQ 222
            +  +KTGAL+  A   GA+     S  E ERL  F + +G+ FQ
Sbjct: 178 YMHCLKTGALIRAAVLLGALAGTPLSAEETERLDHFAKRIGLAFQ 222


>gi|149278033|ref|ZP_01884172.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter
           sp. BAL39]
 gi|149231231|gb|EDM36611.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Pedobacter
           sp. BAL39]
          Length = 322

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 22/235 (9%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
           P++LQE    ID  + +++            +RL   I Y + LGGK+IR  LV   A L
Sbjct: 4   PTQLQEF---IDQAIQNIIY-------PAQPERLYLPISYIMSLGGKRIRPALVLMSADL 53

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F  +    +    AIE  H ++LIHDD+  MDN  +RRGK TVH ++    AI++G+ ++
Sbjct: 54  FAADVHQVMPAALAIETFHNFTLIHDDI--MDNAPLRRGKATVHEKWGVNNAILSGDVMM 111

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQ 181
             A + ++     +  +         T N   QG+  GQ LD++ E  D+    +   + 
Sbjct: 112 VEANKHLAMLDAAVLKDAL------ETFNSTAQGVCEGQQLDMEFESRDQVSIPEYINMI 165

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++KT  L+  A + GA +A A++++ E+L  FGENLGI FQL DD+LD   D  K
Sbjct: 166 RLKTAVLLGGAMKLGAQVARATKSQAEQLYAFGENLGIAFQLQDDILDVYGDPEK 220


>gi|46015525|pdb|1RQI|A Chain A, Active Conformation Of Farnesyl Pyrophosphate Synthase
           Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
           Thiolodiphosphate
 gi|46015526|pdb|1RQI|B Chain B, Active Conformation Of Farnesyl Pyrophosphate Synthase
           Bound To Isopentyl Pyrophosphate And Dimethylallyl S-
           Thiolodiphosphate
          Length = 300

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 3   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 58  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 117

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 118 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 177

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 178 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 237

Query: 236 KK 237
           K+
Sbjct: 238 KR 239


>gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
 gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
          Length = 295

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +       R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L      
Sbjct: 2   IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL
Sbjct: 57  ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
              AFE+++  +   +++     ML+      G  GM+GGQ +D+      +D+  + ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  +   GA+ +  A       L  + E +G+ FQ+ DD+LD E D  
Sbjct: 177 HRHKTGALIEASVRLGALASGRAESASLAALERYAEAIGLAFQVQDDILDVESDTA 232


>gi|242240309|ref|YP_002988490.1| geranyltranstransferase [Dickeya dadantii Ech703]
 gi|242132366|gb|ACS86668.1| Polyprenyl synthetase [Dickeya dadantii Ech703]
          Length = 303

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 10/237 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +RI+T L   +              L+ A+ Y +LLGGK++R FLV    
Sbjct: 3   DFLEQLHAHHQRINTTLRRFISAL-----PFQQIPLIEAMAYGSLLGGKRLRPFLVYSTG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LFN+   +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 58  RLFNLPLESLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 117

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  +   + D  R  ++  L    G+ GM GGQ LD++ E   +D   +  
Sbjct: 118 LQTLAFSILAGTEMPRVSDRDRLSMIAELASASGVGGMCGGQALDLEAEGRQVDLAALEQ 177

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I + KTGAL+  +   GA+ A  A +     L  +   +G+ FQ+ DD+LD   D  
Sbjct: 178 IHRHKTGALIRASVRLGALAAGEAGRQVMPSLDRYANAIGLAFQVQDDILDVIGDSA 234


>gi|325920751|ref|ZP_08182657.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865]
 gi|325548803|gb|EGD19751.1| farnesyl-diphosphate synthase [Xanthomonas gardneri ATCC 19865]
          Length = 291

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 9/233 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M+  L         R +  L+  L  TA         RL +A+R+A+LGG K++R  LV 
Sbjct: 1   MSSAL---FDHWIARTERSLEACLPSTALA-----PQRLHAAMRHAVLGGGKRMRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LF+ +  +      A+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+A
Sbjct: 53  ATGALFDADEDSLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILA 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L T AFE++++        +     L+               +D   +    + +  
Sbjct: 113 GDALQTRAFELLAAASVSADLRVGWLQSLASAAGAAGMCGGQALDIDATGQLQSLSDLER 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +KTGAL+  A   GA+   A+  +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 173 MHALKTGALIRAAVRMGALTGGAAHADQQRLDAFADALGLAFQVRDDILDVES 225


>gi|309378666|emb|CBX22737.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 324

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  +    + +       + S       GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAVQSDVALIAQIGTYIIGS-------GGKRLRPIMTILAGRS 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              ++     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDNEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|326794293|ref|YP_004312113.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
 gi|326545057|gb|ADZ90277.1| Geranyltranstransferase [Marinomonas mediterranea MMB-1]
          Length = 301

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 88/239 (36%), Positives = 130/239 (54%), Gaps = 20/239 (8%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
           +  R+D  L+D L Q  +       D L  A+RY+L  GGK++R  LV   A LF+ ++ 
Sbjct: 10  SRDRVDRYLNDQLTQYDA------ADYLHEAMRYSLFNGGKRVRPMLVYATAELFSESNR 63

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                 AAIE IH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+ G+ L T+AFE+
Sbjct: 64  LTDASAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILTGDALQTFAFEL 123

Query: 131 ISSPKTQLKDNIRSQL-------MLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
           +S+   ++  +  +         + SL+   G  GM+ GQM+D+   D  I    +  + 
Sbjct: 124 LSASYNEIDTDNLADCKTRQLRLIRSLSRASGRFGMVTGQMIDLNNVDRSITLETLEKMH 183

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           + KTGAL+  +   GA       Q    +L  +   +G+ FQ+ DD++D   D   L K
Sbjct: 184 QHKTGALIRASVLMGAQSVGIEDQKILSQLDKYASAIGLAFQVQDDIIDITSDTQTLGK 242


>gi|295397723|ref|ZP_06807795.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
 gi|294974052|gb|EFG49807.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
          Length = 297

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 3/212 (1%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           +LD+ +L++          +L  ++ Y+L  GGK+IR  L+       NV+    L    
Sbjct: 13  VLDEAILKSVDQFGHAQPGQLKESMVYSLNTGGKRIRPMLLLATLKALNVDIQIGLNTAV 72

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MDN   RRGK T H  +DE TAI+AG+ LLT +F +I++    
Sbjct: 73  ALEYIHTYSLIHDDLPAMDNDDYRRGKLTNHKAFDEATAILAGDSLLTDSFALIANDSKI 132

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
                +  L+  L+   G  GM+ GQ+LD+  E   I+   +  I K KTG L+ +A  +
Sbjct: 133 QNMQTKVNLIAELSKAAGSNGMIAGQILDVDSEGKQINLRTLQDIHKHKTGELIRYAVFA 192

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           G  +A AS      L  F    GI +Q+ +DL
Sbjct: 193 GGQIAQASSEVATLLDDFAWAYGIAYQIQNDL 224


>gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896]
          Length = 296

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 130/235 (55%), Gaps = 6/235 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M     S  QE    ++  L ++      H         + ++ Y+LL GGK+IR  L  
Sbjct: 1   MKNKFISAYQEQKNYVEKCLKEI---AEKHTLKAIATLGMESMNYSLLAGGKRIRPILCL 57

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           + A L+++++   L   +A+E IH YSLIHDDLP+MD+  +RRGKPT H  Y E  AI+A
Sbjct: 58  QSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVYGEAIAILA 117

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+GLL  A+EI+ +       + + + +  +    G+ GM+ GQ+LD  ++++  D   +
Sbjct: 118 GDGLLNLAYEIMLNDLLHGYTDGKLKAVHYIAKAAGIHGMVAGQVLDLQMENQRCDADLL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I + KTG L+  +  +GA++  AS+ +      + ++LG++FQ+ DD+LD   
Sbjct: 178 KKIHRNKTGELLKASILAGALVGGASEEDCYYWEQYADHLGLVFQITDDMLDVIG 232


>gi|300313126|ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1]
 gi|300075911|gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 311

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 16/242 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
               + +    ++ +L+  L        +    RL  A+RY A+ GGK++R  LV     
Sbjct: 12  FAQWMGQVQSGMEEVLNRFLPSA-----SVVPARLHEAMRYTAMDGGKRVRPLLVYAAGE 66

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF+       R  AA+E IH YSL+HDD+P MD+  +RRGKPTVHI+YDE TA++ G+ L
Sbjct: 67  LFDTPRALLERAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHIRYDEATALLVGDAL 126

Query: 124 LTYAFEIISSPKTQLK-------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE 174
              AF+ +++P               + +++  L    G  GM GGQ +D+      +  
Sbjct: 127 QAQAFDTLAAPLESEAGSADAGLPARQLRMVKLLAEAAGSVGMCGGQAIDLASVGMTLSL 186

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++  + ++KTGAL+  A   GA+   A +  E   L  +   +G+ FQ+ DD+LD   D
Sbjct: 187 AELEQMHRLKTGALLRAAVLLGALGGKALTAAESAALDDYARAIGLAFQVVDDILDATAD 246

Query: 234 LP 235
             
Sbjct: 247 SA 248


>gi|159045612|ref|YP_001534406.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12]
 gi|157913372|gb|ABV94805.1| octaprenyl-diphosphate synthase [Dinoroseobacter shibae DFL 12]
          Length = 334

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 14/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + L E+   ++ ++ + +    +    +    L+ A      GGK++R  L    A L
Sbjct: 15  LATHLAEDMDAVNVLIRERMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLATARL 68

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L 
Sbjct: 69  CGYTGPYHVHLAATVEFIHTATLLHDDV--VDESNQRRGRPTANLLWDNQSSVLVGDYLF 126

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +F+++    +     +R   +L+       +G +  Q+   QD   DE     + + K
Sbjct: 127 ARSFQLMVETGS-----LRVLDILANAAATIAEGEVL-QLSAAQDLATDEDIYLKVVRGK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T AL   A E G ++A A + +   L  +G+ LGI FQ+ DDLLD   D  K
Sbjct: 181 TAALFSAATEVGGVIAGADEAQVRALFTYGDALGIAFQIVDDLLDYGGDSTK 232


>gi|256820671|ref|YP_003141950.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582254|gb|ACU93389.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 321

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 14/228 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I+      L         +    L   I+Y L LGGK+IR  L      +F  ++  AL 
Sbjct: 4   IEEYKTAFLQHIEKIFTPKEPIHLYEPIQYILNLGGKRIRPLLTLIATDIFGKDYCKALN 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE  H +SLIHDD+  MDN  +RRGKPTVH ++D    I++G+ +L  A++++   
Sbjct: 64  AATAIEVFHNFSLIHDDI--MDNASLRRGKPTVHQKWDTNVGILSGDAMLIIAYKLLEDY 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191
            +++         L  T +     +  GQ +D+  E + E        +   KT  L+  
Sbjct: 122 PSEIFQE------LVKTLSETALKVCEGQQMDMDFEKLQEVSIEAYMQMISYKTSVLIGA 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
           A + G+I++  ++  +  +  FG NLGI FQL DD LD   D    KK
Sbjct: 176 ALQMGSIISETTKENQMNMYNFGLNLGIAFQLQDDYLDTFGDASFGKK 223


>gi|327400499|ref|YP_004341338.1| polyprenyl synthetase [Archaeoglobus veneficus SNP6]
 gi|327316007|gb|AEA46623.1| Polyprenyl synthetase [Archaeoglobus veneficus SNP6]
          Length = 319

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 18/233 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +  ++ + S+ I+  + + L         +  + L +A R+ +  GGK++R  +    A
Sbjct: 2   SIKEEVLKRSEIINRAISEYL-------PVKEPEGLYNAARHLINAGGKRLRPVMCLISA 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +  + +    AIE IH ++LIHDD+  MD   +RRG PTVH+ YDE TAI+AG+ 
Sbjct: 55  EAVGGDVESVIPAAVAIETIHNFTLIHDDI--MDRDELRRGVPTVHVAYDEPTAILAGDT 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFM 179
           L   AF+I+SS   + ++ +++  ML+         +  GQ LD+     E I E++   
Sbjct: 113 LFAEAFKILSSCNVEAENLVKASRMLADV----CIEICEGQYLDMSFEKREKISESEYLE 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + + KT  L+  AC   A++        + L  FG   GI FQ+ DD+LD   
Sbjct: 169 MVRKKTAVLIASACAMPAVLFGMDS-YAKALWNFGIYSGIGFQIHDDVLDITG 220


>gi|117622682|ref|YP_851595.1| geranyltranstransferase [Escherichia coli APEC O1]
 gi|115511806|gb|ABI99880.1| geranyltranstransferase [Escherichia coli APEC O1]
          Length = 299

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKRVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+      GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRATVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|237747110|ref|ZP_04577590.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS]
 gi|229378461|gb|EEO28552.1| octaprenyl-diphosphate synthase [Oxalobacter formigenes HOxBLS]
          Length = 329

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 14/235 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           N    S L      ++ +  D +++   H       R+     Y +  GGK+IR  LV  
Sbjct: 7   NDSGNSFLSPVLPDLEAV--DRIIRQQMHSDIALVGRIAE---YLINAGGKRIRPVLVLL 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A            + A IE IH  +L+HDD+  +D   +RRG P+ +  +   ++++ G
Sbjct: 62  MAKALGYQGKQHQTLAATIEFIHTATLLHDDV--VDESELRRGIPSANALFGNASSVLVG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L T AF+++ S       N+R   +L+   N+  +G +  Q+++ ++  IDE     +
Sbjct: 120 DFLYTRAFQMMVSVG-----NMRILEVLAEATNLIAEGEVM-QLMNARNAAIDEDGYMKV 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KT  L   +   GA++AH S+ +      FG  +G+ FQL DD+LD   D  
Sbjct: 174 IYAKTAKLFEASSVLGALVAHVSEEKIGAAARFGRAVGMAFQLIDDMLDYAGDTG 228


>gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 295

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 129/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEGLFQAPSPELG-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|315498417|ref|YP_004087221.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48]
 gi|315416429|gb|ADU13070.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48]
          Length = 303

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 101/230 (43%), Positives = 136/230 (59%), Gaps = 6/230 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           L  ++QE +  +   LD+LL +           RL  A+RYA LG GK++R F   E   
Sbjct: 13  LHERMQETADLVTMALDELLPRAEG-----FESRLTEAMRYAALGPGKRLRPFFALETGR 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF+ +    LR   A+ECIH YSL+HDDLP MD+  IRRG+ TVH  YDE TA++AG+ L
Sbjct: 68  LFDADSQAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGQLTVHRAYDEATAVLAGDAL 127

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T AFEI++S  T     +R +L+  L    G QGM GGQM+D+     D   V  +Q+M
Sbjct: 128 QTVAFEILASEDTHEDPRVRVELISRLALASGAQGMAGGQMIDLIGVSDDLGGVARMQRM 187

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  A E   I+A A + E   L  F ++LG+ +Q+ADDLLD E D
Sbjct: 188 KTGALIVHAFEIPIIIADAPEKEANSLIHFAQDLGLAYQIADDLLDVEGD 237


>gi|116333612|ref|YP_795139.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
           367]
 gi|116098959|gb|ABJ64108.1| farnesyl-diphosphate synthase [Lactobacillus brevis ATCC 367]
          Length = 300

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 120/209 (57%), Gaps = 7/209 (3%)

Query: 29  SHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCY 85
           + +   H+ +L +A+ Y+ L GGK++R  L         V        R   A+E +H Y
Sbjct: 25  AILADSHDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTY 84

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN  +RRG+PT H+++    A +AG+GLLT AF+ +++  T L   +++ 
Sbjct: 85  SLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTA--TDLPATMQAA 142

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+ +L    G  GM+ GQ  DIQ E ++   +Q+ ++ K KTGAL+ +A ++G I+  A 
Sbjct: 143 LVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAP 202

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +      F +  G+ FQ+ DD+LD   
Sbjct: 203 EAQWPAYLQFADAFGLAFQIYDDILDVVS 231


>gi|119775962|ref|YP_928702.1| trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B]
 gi|119768462|gb|ABM01033.1| Trans-hexaprenyltranstransferase [Shewanella amazonensis SB2B]
          Length = 333

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   N N    L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 53  GGKRLRPLLSVLAARAVNYNGEGHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++   +     ++   +L+   N+  +G +  Q+++  
Sbjct: 111 ALFGNSASVLVGDFLYTRSFQMMTELGS-----MKVLQVLADATNVLAEGEVL-QLMNCN 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A + +  +E L  +G+ LG  FQL DDLL
Sbjct: 165 DPNTTEESYMRVIYCKTAKLFEAATRLAAVLAGSDEKVEEALADYGKYLGTAFQLIDDLL 224

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 225 DYTSDAE 231


>gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
          Length = 294

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 116/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +     +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AENVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDAAA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGDTPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|315616639|gb|EFU97256.1| geranyltranstransferase [Escherichia coli 3431]
          Length = 299

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
             P +L+   K+ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFPQQLEACVKQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ +  AI+AG+ 
Sbjct: 57  HMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGKANAILAGDA 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFM 179
           L T AF I+S     ++ D  R  ++  L    G+ GM GGQ   LD + + +    +  
Sbjct: 117 LQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +     L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|192362196|ref|YP_001983789.1| geranyltranstransferase [Cellvibrio japonicus Ueda107]
 gi|190688361|gb|ACE86039.1| geranyltranstransferase [Cellvibrio japonicus Ueda107]
          Length = 295

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 13/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M            +++DT LD                +L +A+RY+L  GGK++R  L  
Sbjct: 1   MTWTFRDFASHCRQQVDTALDQRFP------LGDDPTQLRAAMRYSLFNGGKRVRPILAY 54

Query: 60  ECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
             A   N   +      + AA+EC+H YSL+HDDLP+MD+  +RRGKPT HI ++E TAI
Sbjct: 55  ASALAINPHISLKQVDPIAAAVECLHAYSLVHDDLPAMDDDDLRRGKPTCHIAFNEATAI 114

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDET 175
           +AG+GL T AFE++ S +     +IR QL+  L    G++GM+ GQ +D+   ++ +   
Sbjct: 115 LAGDGLQTLAFELLGSIEA--PADIRIQLIQVLAKGSGVEGMVLGQAIDLAAVEQQLTLE 172

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           Q+  + + KTGAL+  +   GA+ A A+  +   L  +   +G+ FQ+ DD+LD   D
Sbjct: 173 QLETMHRYKTGALIRASVTMGALFAGANNTQLAALDQYASAIGLAFQVQDDILDVISD 230


>gi|62179034|ref|YP_215451.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62126667|gb|AAX64370.1| geranyltranstransferase (farnesyldiphosphate synthase) [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|322713495|gb|EFZ05066.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 299

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    + +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L   AF IIS  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   I    +  
Sbjct: 117 LQALAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 304

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 15/246 (6%)

Query: 1   MNGGL--PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFL 57
           MN  L     + + +  +++ L  +L              L  ++ Y+L  GGK++R  L
Sbjct: 1   MNDSLTIQQYISQTASDVESALQTILP-----TSWDVPALLKESMMYSLQAGGKRLRPAL 55

Query: 58  VTECASLFNVNHLTALRVGAA---IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           V   A     +   A         IE IH YSLIHDDLP+MDN   RRGK T H  + + 
Sbjct: 56  VLAAAEAVKCDSRAAAAAMPVACAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDA 115

Query: 115 TAIIAGNGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-- 170
            AI+AG+ LLT+AF  I  S+ +  +   +  +++  L+   G  GM+GGQ  D+  E  
Sbjct: 116 MAILAGDALLTHAFHAIVQSTRQHGVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQG 175

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                Q+  I   KT  L+ F+  +GA++  A++ + E++  FG  +G+ FQ+ DD+LD 
Sbjct: 176 VTSIDQLRYIHLHKTSDLIVFSLRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDL 235

Query: 231 EEDLPK 236
             D  K
Sbjct: 236 VGDEAK 241


>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 295

 Score =  198 bits (503), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 12/239 (5%)

Query: 1   MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
           MN   + ++L      +++ L  +          +    L++++ Y+L+ GGK++R  L 
Sbjct: 1   MNPQEMKAELGVLGALVESRLATIFA------DGRSPSPLVASMEYSLMAGGKRLRPVLC 54

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A L   +    L    AIECIH YSLIHDDLP+MD+  +RRGKP+ H ++DE TAI+
Sbjct: 55  LAWAELAGGSVHAVLDFACAIECIHTYSLIHDDLPAMDDDDLRRGKPSNHKRFDEATAIL 114

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQ 176
           AG+GLLT AF + SS   +L+     + +  L+   G +GM+GGQ+LD+    +     Q
Sbjct: 115 AGDGLLTEAFTLASSL--ELRPERILKAVFHLSTAAGPRGMVGGQVLDMGLTGKSASLPQ 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +   KTGAL+  +C +G ++     +E+ +   +G  +G+ FQ+ DD+LD   D  
Sbjct: 173 LREMHAKKTGALIETSCVTGCVLGGGDDSEQAKASEYGRAIGLAFQVTDDILDVIGDEA 231


>gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
 gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
 gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
 gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2]
 gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1]
 gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
 gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
 gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1]
 gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2]
 gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
          Length = 294

 Score =  198 bits (503), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 116/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L        T    RL  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----ADTVVPARLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+    I     Q+  + 
Sbjct: 118 QSQAFVALTDAAA-LSPVQQAALVRELALASGSLGMAGGQAIDLASVGIKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADTMAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|116629411|ref|YP_814583.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
           33323]
 gi|282850888|ref|ZP_06260262.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
 gi|116094993|gb|ABJ60145.1| farnesyl-diphosphate synthase [Lactobacillus gasseri ATCC 33323]
 gi|282557840|gb|EFB63428.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
          Length = 288

 Score =  198 bits (503), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 24/246 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L    ++ + +ID  L+D L           N      + Y+++ GGK++R  L  
Sbjct: 1   MN--LKDFQKKYTPQIDKFLEDHLASEVD------NPIFSKIMSYSVMAGGKRLRPLLFL 52

Query: 60  ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 N     + LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+
Sbjct: 53  ATLETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAIL 112

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176
           AG+ LL    + I+           + L + ++  +G  GM+GGQ LDI     D  +  
Sbjct: 113 AGDALLPLGIQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKEN 166

Query: 177 ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230
              +  ++ +KTG L+  + +  A+ A AS +E +RL  F +  G  +Q+ DDL+D    
Sbjct: 167 AKVIDQMEWLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVET 226

Query: 231 EEDLPK 236
           E++  K
Sbjct: 227 EQEAGK 232


>gi|170744677|ref|YP_001773332.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
 gi|168198951|gb|ACA20898.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
          Length = 290

 Score =  198 bits (503), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 98/223 (43%), Positives = 135/223 (60%), Gaps = 7/223 (3%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRV 75
           +  LD+ L       +     RL+ A+R+A+LGG K++R FL  E A L    +  AL  
Sbjct: 2   EVFLDERLGDATGPGEITRPPRLMQAMRHAVLGGGKRLRPFLTIETARLLGGPYPGALAA 61

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  IE +HCYSL+HDDLP+MD+  +RRGKPTVH  +DE TAI+AG+ LLT AFE+++ P 
Sbjct: 62  GGGIELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAFDEATAILAGDALLTLAFELLADPA 121

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDETQVFMIQKMKTGALM 189
            Q    IR+ L+L L    GL GM+GGQ+LD+  E       +D      +Q MKTGAL+
Sbjct: 122 WQPDAGIRADLVLGLARAAGLGGMVGGQLLDLGAEGRFGEAALDVDATLQLQAMKTGALL 181

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + E+GAI+  A   ++  L  +G  LG  FQ+ADD+LD E 
Sbjct: 182 AVSVEAGAIVGGADAEQRAALLAYGRALGQAFQVADDILDREA 224


>gi|134093559|ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans]
 gi|133737462|emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Herminiimonas arsenicoxydans]
          Length = 294

 Score =  198 bits (503), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 73/220 (33%), Positives = 120/220 (54%), Gaps = 8/220 (3%)

Query: 22  DLLLQTASHMQTQ--HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           ++ L    H+        RL  A+ YA+L GGK++R  LV    +LF+ +     R  AA
Sbjct: 14  EMELALVQHLPPVALTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAA 73

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH YSL+HDD+P MD+  +RRGKPTVH++YDE  A++ G+ L + AF++++     +
Sbjct: 74  VEMIHAYSLVHDDMPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLADGG--I 131

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196
               +  ++  L    G  GM GGQ +D+      +   ++  + ++KTGAL+  +   G
Sbjct: 132 DPVRQLAMVRLLAKASGSLGMCGGQAIDLASVGLNLSLEELEQMHRLKTGALLRVSVLLG 191

Query: 197 AIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A+   + S  E + L  +   +G+ FQ+ DD+LD   D  
Sbjct: 192 ALAGKSLSAEETQALDSYAAAIGLAFQVVDDVLDATADSA 231


>gi|163741857|ref|ZP_02149247.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
 gi|161385030|gb|EDQ09409.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis 2.10]
          Length = 332

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 16/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L +    ++T++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 13  LAATLSDEMAAVNTLI-------QTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +    +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 66  LCGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +F+++    +     +R   +L+       +G +  QM    D   DE     + + 
Sbjct: 124 FARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAASDLATDEEIYLQVVRG 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT AL   A ++G ++A+A + + + L  +G+ LGI FQ+ADDLLD + D  
Sbjct: 178 KTAALFSAATQAGGVVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSA 229


>gi|304389087|ref|ZP_07371131.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091]
 gi|304336960|gb|EFM03150.1| geranyltranstransferase [Neisseria meningitidis ATCC 13091]
          Length = 298

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 83/238 (34%), Positives = 127/238 (53%), Gaps = 10/238 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H++Y E TA++ G
Sbjct: 59  ASELGEAVHEAVGQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVF 178
           + L T AF+++S P T+L    +  ++  L    G  GM GGQ +D+ +      +  + 
Sbjct: 119 DALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSMGMAGGQAIDLANVGKQMVQADLE 177

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 178 QMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|161527820|ref|YP_001581646.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339121|gb|ABX12208.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
          Length = 326

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 13/233 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           ++++N+K ++  L   L          +  +L  A  +  + GGK++R ++V     +  
Sbjct: 6   QIEKNAKTVNKYLKSKL--------KGNPKKLYDAAGHLIVHGGKRLRPYMVIRSCQILG 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   +A+E +H ++L+HDD+  MDN  +R G PT H +Y    AI+AG+ L + 
Sbjct: 58  GKSSNAMPAASAVEMVHNFTLVHDDI--MDNDEMRHGVPTTHRKYGMPIAILAGDVLFSK 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A+++IS  K            L+       +G L    +  + +   ++Q   +   KT 
Sbjct: 116 AYQVISDTKLSPTATTHLISRLAKACVDVCEGQLLDVKMAEEKKIPTQSQYITMIGKKTA 175

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           AL   +C  GAI A     +   L  FG NLGI FQ+ DDL+    D    KK
Sbjct: 176 ALFDVSCAMGAICATNKGKDISNLSSFGRNLGIAFQITDDLIGVMGDPKITKK 228


>gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
 gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
          Length = 294

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +T    +L  A+RYA++GG K++R  L      
Sbjct: 3   FEQWMRAVLARVEDALGHYLP-----AETVVPGKLHEAMRYAVMGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVHIQYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHIQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF +  +    L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAF-VALTDAAALTAVQQAALVRELALASGSVGMAGGQAIDLASVGLMLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + KTGAL+  A   GA+     S +    L  + + +G+ FQ+ DD+LD   D  
Sbjct: 177 RKKTGALLRAAVRMGALAGETPSDDTMRALDVYADAIGLAFQVVDDILDVTTDSA 231


>gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1]
 gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1]
          Length = 351

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 19/220 (8%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLF--NVNHLTA-----------LRVGAAIEC 81
            + L  A RYA+  GGK++R  LV     +     +H               R   A+E 
Sbjct: 74  PEPLNKACRYAMSNGGKRVRPLLVLSTFLMLIQTGDHKNHKNNLTKKIQMLFRAMMAVEL 133

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDDLP MD+  +RRG+PT HI Y E  A++AG+ L + AFE++     +   +
Sbjct: 134 IHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSAD 193

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM 199
                 L+   +   + M+ GQMLDI+ E   + + ++  I + KTGAL+  A   GAI 
Sbjct: 194 DAIAYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAIC 253

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           A    +    L+ +   +G+ FQ+ DD+LD   D   L K
Sbjct: 254 ADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGK 293


>gi|261401641|ref|ZP_05987766.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970]
 gi|313667728|ref|YP_004048012.1| octaprenyl-diphosphate synthase [Neisseria lactamica ST-640]
 gi|269208281|gb|EEZ74736.1| octaprenyl-diphosphate synthase [Neisseria lactamica ATCC 23970]
 gi|313005190|emb|CBN86623.1| octaprenyl-diphosphate synthase [Neisseria lactamica 020-06]
          Length = 324

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  +    + +       + S       GGK++R  +       
Sbjct: 8   FQQHLSEDLAKVNKVINRAVQSDVALIAQIGTYIIGS-------GGKRLRPIMTILAGRS 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYIQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|126728318|ref|ZP_01744134.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Sagittula stellata E-37]
 gi|126711283|gb|EBA10333.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Sagittula stellata E-37]
          Length = 325

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 12/216 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
             ++DL+ +    M ++H  R+     + +  GGK++R  L    A L   +    + + 
Sbjct: 16  AAVNDLIRE---RMASRHAPRIPEVTAHLVEAGGKRLRPMLTLASAKLCGYDGPYHVHLA 72

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F++++    
Sbjct: 73  ATVEFIHTATLLHDDV--VDESERRRGRPTANLLWDNKSSVLVGDYLFARSFQLMTETG- 129

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
               N+R   +LS       +G +  Q+   QD    E     + + KT AL   A E G
Sbjct: 130 ----NLRVLRILSDAAATIAEGEVL-QLTAAQDLSTTEDIYLQVVRGKTAALFSAATEVG 184

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++A   + +   L  +G+ LGI FQ+ DDLLD   
Sbjct: 185 GVIAGRPEEDVRALFDYGDALGIAFQIVDDLLDYWG 220


>gi|313204536|ref|YP_004043193.1| polyprenyl synthetase [Paludibacter propionicigenes WB4]
 gi|312443852|gb|ADQ80208.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4]
          Length = 325

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K  D I   +  +      ++    L   I Y L LGGK+IR  L     +LF+ +  +A
Sbjct: 2   KTFDEITQLISSEIEQINWSKEPRGLYEPIGYVLSLGGKRIRPALTLMACNLFSDDVQSA 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +     IE  H ++L+HDD+  MD   +RRG+PTVH ++D+ TAI++G+ +   +++ ++
Sbjct: 62  MNTALGIEIFHNFTLLHDDI--MDRADVRRGRPTVHKKWDDNTAILSGDVMQIASYQFVT 119

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALM 189
             KT  K   ++  + S T       +  GQ  D+  E  D+    +   + ++KT  L+
Sbjct: 120 --KTPEKYLKKTLDLFSKTAA----EICEGQQYDVDFESRDDVKADEYLEMIRLKTAVLL 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
             A ++GA +  A + + + L  FG N+G+ FQL DDLLD   D     KK
Sbjct: 174 GAALQTGAWIGGAGEEDAQLLYDFGINIGLAFQLKDDLLDVYGDEATFGKK 224


>gi|319941604|ref|ZP_08015928.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B]
 gi|319804834|gb|EFW01688.1| farnesyl-diphosphate synthase [Sutterella wadsworthensis 3_1_45B]
          Length = 296

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 13/231 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           ++E     +   + +L QT          RL+ A+RY+LLGG K+IR  L     ++   
Sbjct: 1   MKERVSHFEWFAEKMLPQTGI-----GAKRLVGAMRYSLLGGGKRIRPLLCYAAGAVSGA 55

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 R   A+E IH YSL+HDD+PSMDN  +RRG+ T H++Y E  A++AG+ L T A
Sbjct: 56  PEEVLDRAALALEMIHSYSLVHDDMPSMDNDTLRRGRATTHVRYGEAMAMLAGDALQTEA 115

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
           F ++SSP   +      +L+ +L    G+ GM GGQ LD  +  +     ++  +Q MKT
Sbjct: 116 FTVLSSP--SVPPEAAQRLVQTLARAAGVWGMCGGQALDLEMVGQKPGAAELSRMQAMKT 173

Query: 186 GALMCFACESGA---IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GA++  A   GA   I        K  L  + + LG+ FQ+ DD+LDC +D
Sbjct: 174 GAMIMAAVLMGAQSGIWTALGDQAKAGLAAYADALGVAFQVVDDILDCTQD 224


>gi|310779233|ref|YP_003967566.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748556|gb|ADO83218.1| Polyprenyl synthetase [Ilyobacter polytropus DSM 2926]
          Length = 294

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 124/235 (52%), Gaps = 9/235 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L+E  + ID  + + L         ++   +   ++YA+L GGK++R  L+     
Sbjct: 2   LKNYLKEKREIIDESVKNYLDDL------KYPKVIADGMKYAVLNGGKRLRPILLLMTLK 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L        +    AIE IH YSL+HDDLP++D+   RRGK T H +Y E   I+ G+ L
Sbjct: 56  LLGEREEKGIPAAVAIEMIHSYSLVHDDLPALDDDDYRRGKLTTHKKYGEAQGILIGDAL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT+AF +++S   ++       ++   +   G+ GM+GGQM+DI+ E   ID   +  I 
Sbjct: 116 LTHAFNVLTSKDQEIDAQKIVDIVRLTSQYAGVNGMIGGQMVDIESEGKSIDLPVLQYIH 175

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KTG ++    E   I+A     +KE+L  + E +G+ FQ+ DD+LD E D  K
Sbjct: 176 THKTGKMISLPVEVACIIAGIEGEKKEKLIEYSELIGLAFQIKDDILDIEGDFEK 230


>gi|308388479|gb|ADO30799.1| geranyltranstransferase [Neisseria meningitidis alpha710]
 gi|325130987|gb|EGC53714.1| geranyltranstransferase [Neisseria meningitidis OX99.30304]
 gi|325137086|gb|EGC59682.1| geranyltranstransferase [Neisseria meningitidis M0579]
 gi|325202912|gb|ADY98366.1| geranyltranstransferase [Neisseria meningitidis M01-240149]
 gi|325207289|gb|ADZ02741.1| geranyltranstransferase [Neisseria meningitidis NZ-05/33]
          Length = 298

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA+L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAVLDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E TA++ G
Sbjct: 59  ASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLVG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           + L T AF+++S P         +   +L+               L    + + +  +  
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|56695234|ref|YP_165582.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
 gi|56676971|gb|AAV93637.1| decaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
          Length = 332

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 16/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L +    ++ ++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 13  LAATLSQEMAAVNALI-------RTRMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L        +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 66  LCGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +F+++    +     +R   +L+       +G +  QM    D   DE+    + + 
Sbjct: 124 FARSFQLMVETGS-----LRVLDILANAAATIAEGEVL-QMTAASDLRTDESVYLQVVRG 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT AL   A E G ++A   + +   L  +G+ LGI FQ+ADDLLD + D  
Sbjct: 178 KTAALFSAATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAK 229


>gi|241760794|ref|ZP_04758885.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114]
 gi|241318691|gb|EER55243.1| octaprenyl-diphosphate synthase [Neisseria flavescens SK114]
          Length = 324

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L ++  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPDDLAKVNAVINQAV-QSDVALISQIGTYIISA------GGKRLRPIITILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGHDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     +R   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVGSGS-----MRILEVMADATNIIAEGEVM-QLMNIGNTDITEEQYVQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A + GAI+  AS   ++ L+ +G  +G  FQ+ DD+LD   +  
Sbjct: 173 TAKLFEAAAQVGAILGKASTEHEQALKDYGMYVGTAFQIIDDVLDYSGETE 223


>gi|168818966|ref|ZP_02830966.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205344074|gb|EDZ30838.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320084699|emb|CBY94490.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 299

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    + +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   I    +  
Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDHYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|114326884|ref|YP_744041.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1]
 gi|114315058|gb|ABI61118.1| dimethylallyltransferase [Granulibacter bethesdensis CGDNIH1]
          Length = 309

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 91/234 (38%), Positives = 140/234 (59%), Gaps = 9/234 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L   L   +  ++  LD LL      +      R++ A+RYA+L GGK++R+FLV E 
Sbjct: 15  SALKEALTRRAHEVEAALDRLLP-----VPPGPESRVVEAMRYAVLNGGKRLRAFLVLES 69

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A+LF      + +R  A++E +H YSL+HDDLP+MD+  +RRGKP+ H  +DE TAI+AG
Sbjct: 70  AALFDGAAAESGVRAAASVEMLHAYSLVHDDLPAMDDDDLRRGKPSAHRAFDEATAILAG 129

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + L T AFE+++   T      R  L+L+L   +G  GM+GGQM+D+  E   +   QV 
Sbjct: 130 DALQTSAFELLADAATHPDPAARCALVLALARAVGADGMVGGQMIDMASEGRALTAEQVG 189

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  +KTG L+ ++ E+G I+  A+  ++E L  +G +LG  FQ+ DD+LD E 
Sbjct: 190 RLHALKTGRLIQYSAEAGGILGAATPAQQEALASYGRDLGAAFQIVDDILDTEG 243


>gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1]
 gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1]
          Length = 294

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 118/235 (50%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L        T     L  A+RYA++GG K++R  L      
Sbjct: 3   FQQWMRAVLARVEDALGHYLP-----ADTVVPGTLHEAMRYAVMGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   +    AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGASEAASNAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+    + +   Q+  + 
Sbjct: 118 QSQAFVALTDAAA-LSPQQQAALVRELALASGSIGMAGGQAIDLASVGQMLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  +   GA+     + +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRASVRMGALAGETPTADTMRALDAYAAAVGLAFQVVDDILDVTTDSA 231


>gi|300309704|ref|YP_003773796.1| octaprenyldiphosphate synthase [Herbaspirillum seropedicae SmR1]
 gi|300072489|gb|ADJ61888.1| octaprenyldiphosphate synthase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 309

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 15/219 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + ++ ++   L      +  Q  + ++SA      GGK++R  LV   A+ F        
Sbjct: 2   EAVNAVIRRQLYSEVP-LVNQVAEYIISA------GGKRLRPVLVVLIANAFGYKGEHHH 54

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ L + AF+++ +
Sbjct: 55  SLAAVIEFIHTATLLHDDV--VDESSLRRGKQTANAMFGNAASVLVGDFLYSRAFQMMVA 112

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  N R   +++   N+  +G +  Q+L++ +  +DE     + + KT  L   A 
Sbjct: 113 VG-----NPRVMEIVADATNVIAEGEVL-QLLNMHNPDVDENGYLQVIRSKTAKLFEAAS 166

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + GA++A A +   E    +G ++G  FQL DD+LD   
Sbjct: 167 QIGALIAGADEAGIEAAAEYGRSIGTAFQLIDDVLDYSG 205


>gi|224536141|ref|ZP_03676680.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522223|gb|EEF91328.1| hypothetical protein BACCELL_01006 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 324

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 12/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +L++     A    T+    L + + Y L +GGK+IR  L+    +L+  +        
Sbjct: 6   ELLENFNSHIAGLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLLAYNLYKEDVTRIYAPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A++ ++   +
Sbjct: 66  TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAECPS 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
                +     L+         +  GQ +D++ E    +   +   + ++KT  L+  + 
Sbjct: 124 TFLKEVMDLFSLT------ALEICEGQQMDMEFEQRNDVTAEEYLEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + GA +  AS  + +RL  FG ++G+ FQL DDLLD   
Sbjct: 178 KIGARLGGASVEDADRLYDFGMHIGVAFQLKDDLLDVYG 216


>gi|149195157|ref|ZP_01872248.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134709|gb|EDM23194.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
          Length = 278

 Score =  197 bits (502), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 7/220 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAA 78
           +++ + +    + T H +   +     L GGK+ R  L+      +N      A     A
Sbjct: 1   MEEFIKKNLIKLNTFHPNFEKALNEMLLAGGKRFRPKLLISVVKAYNPLLIDNAKYAAFA 60

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH YSLIHDDLP+MD+  +RRG PT+H  YDE TAI+ G+GL TYAFE++S  K  +
Sbjct: 61  IELIHTYSLIHDDLPAMDDATLRRGHPTLHTTYDEATAILVGDGLNTYAFEVLS--KAPI 118

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESG 196
            ++I+ +L+  L+ N G+ GM+ GQ +D   +++ ++  ++  +   KT  L+  + + G
Sbjct: 119 HNDIKIELIKILSENAGVSGMVLGQAIDLYFENKKLNLDELKELHINKTAKLIAASLKMG 178

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AI+ +   +  E+L  FG  LG++FQ+ DDLLD E D  K
Sbjct: 179 AIIVN-KIDLAEKLYDFGIKLGLLFQIQDDLLDLE-DETK 216


>gi|313897461|ref|ZP_07831004.1| geranyltranstransferase [Clostridium sp. HGF2]
 gi|312957831|gb|EFR39456.1| geranyltranstransferase [Clostridium sp. HGF2]
          Length = 280

 Score =  197 bits (502), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 75/224 (33%), Positives = 118/224 (52%), Gaps = 10/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           + D     +  + T  + R+  A++Y+L+ GGK+IR  L+      +         V AA
Sbjct: 1   MSDFESYLSHCLDTLEHSRVREAMQYSLMAGGKRIRPRLLLAVLRAYGFEETIGYPVAAA 60

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH YSLIHDDLP+MDN  +RRG PT H+++ E  AI+AG+ LLT AF   ++     
Sbjct: 61  IEMIHTYSLIHDDLPAMDNDTLRRGMPTCHVKFGEDVAILAGDALLTQAFYTAAACT--C 118

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACES 195
           +  +  +++  L+   G  GM+ GQ+ D++ E    ID   + +I   KTG L+      
Sbjct: 119 RAEVLVEILKLLSEFSGANGMILGQIKDLEGEANPGIDHAGLQVIHYYKTGRLLSLPLVC 178

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            A++A   + +       G + G+ FQ+ DD+LD     E+L K
Sbjct: 179 AALLAGH-REDAAVWERIGADTGLSFQIQDDILDVTSTVEELGK 221


>gi|77409329|ref|ZP_00786032.1| geranyltranstransferase [Streptococcus agalactiae COH1]
 gi|77172061|gb|EAO75227.1| geranyltranstransferase [Streptococcus agalactiae COH1]
          Length = 290

 Score =  197 bits (502), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 77/224 (34%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGA 77
           +D+ + +      +  +  L+ AI Y++  GGK+IR  ++ E    F V        V A
Sbjct: 7   IDEAIHRHYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAA 66

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SLIHDDLP+MDN   RRG+ T H ++DE TA++AG+ L    F+++     +
Sbjct: 67  ALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFK 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
               +R   +LS++   G  GM+GGQMLD++ E   +    + +I   KTG L+ +   +
Sbjct: 127 ADVTVRLIELLSMS--AGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFXA 184

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             I+A  S+  K +L   G  +G  FQ+ DD+LD     E+L K
Sbjct: 185 AGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGK 228


>gi|86140814|ref|ZP_01059373.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella
           blandensis MED217]
 gi|85832756|gb|EAQ51205.1| putative isoprenoid biosynthesis related protein [Leeuwenhoekiella
           blandensis MED217]
          Length = 324

 Score =  197 bits (502), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 12/223 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           RID   +  +      +  +    L   I Y L LGGK++R  L      +F  +H  AL
Sbjct: 3   RIDQYTEVFVAYLNDKLAIKEPANLYEPIHYILQLGGKRLRPVLTLMATDIFESDHQKAL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E  H +SL+HDD+  MD+  +RRG+ TVH ++D  T I++G+ +L  A+++  +
Sbjct: 63  DAALAVEVFHNFSLVHDDI--MDDAPLRRGEETVHEKWDVNTGILSGDAMLIRAYQLFEN 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            + +          L+   +     +  GQ  D+  E  D+    +   + + KT  L+ 
Sbjct: 121 YEGETF------RALAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVG 174

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A + GAI+A+AS     R+  +G +LGI FQL DD LD   D
Sbjct: 175 AALKMGAIVANASAENANRIYEYGRDLGIAFQLQDDYLDAFGD 217


>gi|268592056|ref|ZP_06126277.1| geranyltranstransferase [Providencia rettgeri DSM 1131]
 gi|291312449|gb|EFE52902.1| geranyltranstransferase [Providencia rettgeri DSM 1131]
          Length = 305

 Score =  197 bits (502), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 91/243 (37%), Positives = 132/243 (54%), Gaps = 13/243 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
                + ++   R++  L D L     +     N  L  A+RY  LLGGK++R FL    
Sbjct: 7   DSFTQQQKQAYDRVNQYLLDAL-----NALPFANLPLAQAMRYGTLLGGKRLRPFLTYAI 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            S+F V+        AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI+Y E  A++AG+
Sbjct: 62  GSMFGVSQENLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKYGEGNAVLAGD 121

Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L T AF+++SS P   + D  R  ++  L++  GL GM GGQ LD+  E   +D   + 
Sbjct: 122 ALQTLAFQLLSSAPMPDVTDKDRIAMIAELSYASGLAGMCGGQALDLDAEGKQVDLESLE 181

Query: 179 MIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---L 234
            I + KTGAL+  A   GA  A    Q     L  + +++G+ FQ+ DD+LD   D    
Sbjct: 182 RIHQHKTGALIRAAIRLGAFAAGEKGQQLLPVLDKYAQSIGLAFQVQDDILDVIGDSEVT 241

Query: 235 PKK 237
            K+
Sbjct: 242 GKR 244


>gi|161504393|ref|YP_001571505.1| geranyltranstransferase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865740|gb|ABX22363.1| hypothetical protein SARI_02504 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 299

 Score =  197 bits (502), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    + +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFMQQLQACVSQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  QMFGVSTATLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   I    +  
Sbjct: 117 LQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGHQISLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
          Length = 180

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 5/177 (2%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +RY+LL GGK++R  L      L   +   A+    A+E IH  SLIHDDLP MDN   R
Sbjct: 1   MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGML 160
           RGKPT H  + E TA++AG+ LL++AFE I+   ++   + R+  ++S     I  QG++
Sbjct: 61  RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120

Query: 161 GGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           GGQ++DI  E    +D   +  I   KT  L+  +  +G I+  A+++E  R+R + 
Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIRRYA 177


>gi|198276974|ref|ZP_03209505.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135]
 gi|198270499|gb|EDY94769.1| hypothetical protein BACPLE_03181 [Bacteroides plebeius DSM 17135]
          Length = 327

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 14/228 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           + +L  +     +    +    L   I Y L LGGK++R  L+    +L+  +       
Sbjct: 7   EQLLQQIHEYIGNLSYMREPMGLYDPIEYVLGLGGKRLRPVLMLLAYNLYKEDVTRIFSQ 66

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE  H ++L+HDDL  MD   +RR KPTVH ++DE TAI++G+ +L  A++ +   +
Sbjct: 67  AAGIETYHNFTLLHDDL--MDKADMRRNKPTVHKKWDENTAILSGDAMLILAYQFMMK-E 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             L+   R   +   T       +  GQ  D++ E    +   +   + ++KT  L+  A
Sbjct: 124 CPLECVERVMEVFGRT----ALEVCEGQQWDMEFEHRLDVTVDEYIEMIRLKTSVLLAAA 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            + GAI+  A + + + L  FG  +G+ FQL DD LD   D     KK
Sbjct: 180 LKIGAILGGAPEKDAQLLYDFGIKMGLAFQLQDDYLDVYGDPAVFGKK 227


>gi|329118546|ref|ZP_08247250.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465281|gb|EGF11562.1| octaprenyl-diphosphate synthase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 324

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  +          +      + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 44  AGGKRLRPIITILAGKSLGYDGDPLYSLAAMVEFIHTSTLLHDDV--VDESDMRRGRETA 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    A++ G+ L T AF+++    +     ++   +++   NI  +G +  Q+++I
Sbjct: 102 NNLFGNAAAVLVGDFLYTRAFQLMVGSGS-----MKILEVMADATNIIAEGEVM-QLMNI 155

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  I ET+   + + KT  L   A + GAI+A AS  ++  LR +G  +G  FQ+ DD+
Sbjct: 156 GNTDISETEYLRVIQYKTAKLFEAAAQVGAILAGASAEQEAALRDYGMYVGTAFQIVDDI 215

Query: 228 LDCEED 233
           LD   D
Sbjct: 216 LDYCGD 221


>gi|220904228|ref|YP_002479540.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 298

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 86/237 (36%), Positives = 126/237 (53%), Gaps = 12/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             +   L+E  + ++  L   L   A         RL  ++ Y+L  GGK++R  L    
Sbjct: 6   SRMKELLRERGQMVEEELAVCLDGRA------VPQRLKDSMLYSLQAGGKRLRPVLCLSA 59

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L  +    AL   +AIE IH YSL+HDDLP+MD+  +RRGKP+ H  +DE TAI+AG+
Sbjct: 60  AALCGLPLRDALPFASAIEMIHTYSLVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGD 119

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-- 179
           GLLT AF ++   ++ L      + +  L    G  GM+GGQ  D+     D   +    
Sbjct: 120 GLLTDAFLMM--CRSPLAPPRVLRAISELALAAGSSGMVGGQEWDMIFTGKDLVSIEDLR 177

Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            I  MKTGAL+  +C  GA++A AS  +   +  +G  LG+ FQ+ADD+LD   D  
Sbjct: 178 GIHAMKTGALLRASCVCGAMLAGASDEDLAAIGSYGAALGVAFQIADDILDVVADTA 234


>gi|254447158|ref|ZP_05060625.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
 gi|198263297|gb|EDY87575.1| geranyltranstransferase [gamma proteobacterium HTCC5015]
          Length = 297

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 125/236 (52%), Gaps = 11/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L    +R++  ++  L         Q  + L SA+ Y A  GGK++R  L    A
Sbjct: 2   DFKQALAHYQERVNATIERYLPD-----PQQAPEALHSAMHYSATGGGKRVRPLLCYATA 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +        AA+E IH YSL+HDDLP+MD+  +RRG+ T HI +DE TAI+AG+ 
Sbjct: 57  EALGQSAEQVDGAAAALELIHAYSLVHDDLPAMDDDDLRRGQATCHIAFDEATAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF+I++S +    D   R + +  L    G+ GM+GGQ +DI  E   +   Q+  
Sbjct: 117 LQTLAFDILASDQALTDDPARRLRAVKVLASASGVDGMVGGQAIDIAAEGQQLTLDQLKR 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +KTGAL+  + +  A +A  ++  +  +RL  + E +G+ FQ+ DD+LD   D
Sbjct: 177 MHALKTGALIRASVQISAALAGEAENGDTYQRLSRYAECIGLAFQIRDDILDVISD 232


>gi|294789130|ref|ZP_06754369.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453]
 gi|294482871|gb|EFG30559.1| octaprenyl-diphosphate synthase [Simonsiella muelleri ATCC 29453]
          Length = 324

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L+ +  R++ +++  + Q+   + +Q    ++ A      GGK++R  L       
Sbjct: 8   FQQNLEHDLSRVNLVVNQAV-QSDVALISQIGTYIIGA------GGKRLRPILTILSGKC 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  LGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++    +     ++   +++   NI  +G +  Q+++I +  I E Q   + + K
Sbjct: 119 TRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNIGNIDITEAQYLQVIQYK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GAI+A A+  ++  L+ FG  +G  FQ+ DD+LD   
Sbjct: 173 TAKLFEAAAQVGAILAGATHEQETALKNFGMYMGTAFQIIDDVLDYSG 220


>gi|283784240|ref|YP_003364105.1| geranyltranstransferase [Citrobacter rodentium ICC168]
 gi|282947694|emb|CBG87249.1| geranyltranstransferase [Citrobacter rodentium ICC168]
          Length = 299

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 90/242 (37%), Positives = 132/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ   ++ +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFTRQLQVCVEQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  KMFGVSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L +  G+ GM GGQ LD+  E   +    +  
Sbjct: 117 LQTLAFTIISDAPMPEVTDRDRIAMISELANASGIAGMCGGQALDLDAEGRQVPLAALEK 176

Query: 180 IQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGEKGRNVLPILDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|329957776|ref|ZP_08298251.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
 gi|328522653|gb|EGF49762.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
          Length = 324

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 19/229 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  ++I++ + DL          +    L   I Y L +GGK+IR  L+    +L+  N 
Sbjct: 6   ELLEKINSHIADLRF-------VRSPKGLYDPITYVLSMGGKRIRPVLMLMAYNLYKENV 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A      IE  H Y+L+HDDL  MD    RRGK TVH  +++  AI++G+ +L  A++
Sbjct: 59  EPAFSSATGIEVYHNYTLLHDDL--MDRADKRRGKETVHKVWNDNAAILSGDAMLVLAYQ 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTG 186
            ++         ++    +    ++    +  GQ +D++ E    + E +   + ++KT 
Sbjct: 117 FMAQCP------VKHLKEVMDLFSLTAFEICEGQQMDMEFEQRNDVKEEEYLEMIRLKTS 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L+  + + GA++  AS ++  RL  FG N+G+ FQL DDLLD   D  
Sbjct: 171 VLLAASLKIGALLGGASADDAARLYDFGMNMGVAFQLKDDLLDVYGDAA 219


>gi|218282379|ref|ZP_03488661.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989]
 gi|218216665|gb|EEC90203.1| hypothetical protein EUBIFOR_01243 [Eubacterium biforme DSM 3989]
          Length = 280

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/220 (35%), Positives = 114/220 (51%), Gaps = 10/220 (4%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           +   +D LL     +Q   + R   A+ Y+L+ GGK++R  L+      + ++       
Sbjct: 2   NKEFEDYLL---VRVQENDDSRTKDAMAYSLMNGGKRVRPMLLFSVLEGYGMDAHVGYPC 58

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIE IH YSL+HDDLP+MDN  +RRGKP+ H  YDE TAI+AG+GLLT AFE++   +
Sbjct: 59  ACAIEMIHTYSLVHDDLPAMDNDDLRRGKPSCHKAYDEATAILAGDGLLTKAFEVVLDSE 118

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCFA 192
              K  +     LS     G+ GM+ GQ LD+Q E         +  I   KT  L+   
Sbjct: 119 CSAKQKVALVKALSWY--AGIDGMIYGQTLDLQAENDTNPTFALLQEIDHYKTSKLLTLP 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              G I+A+   +  +  R  G  LG+ FQ+ DD+LD   
Sbjct: 177 LVCGCILANKFDD-IDHFRKIGLVLGLEFQMQDDILDVVG 215


>gi|15967020|ref|NP_387373.1| geranyltranstransferase protein [Sinorhizobium meliloti 1021]
 gi|307302488|ref|ZP_07582245.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C]
 gi|307316182|ref|ZP_07595626.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83]
 gi|15076293|emb|CAC47846.1| Probable geranyltranstransferase [Sinorhizobium meliloti 1021]
 gi|306898022|gb|EFN28764.1| Polyprenyl synthetase [Sinorhizobium meliloti AK83]
 gi|306903158|gb|EFN33748.1| Polyprenyl synthetase [Sinorhizobium meliloti BL225C]
          Length = 304

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 112/236 (47%), Positives = 158/236 (66%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
              P++L+ N+  ++ +L+ LL       +      LL A+R+  L GGK++R FLV E 
Sbjct: 6   SSFPARLKTNAVAVEALLETLLGPAVGTGEIARPANLLGAMRHGVLNGGKRLRPFLVAES 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L   +   ALR GAA+ECIHCYSL+HDDLP+MD+  +RRGKPTVH+ +DE TAI+AG+
Sbjct: 66  TALLGGDAEAALRTGAALECIHCYSLVHDDLPAMDDDDMRRGKPTVHVAFDEATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
            LLT+AF+I+++P+T L D  ++ L+L+L    G  GM GGQ LD+  E    DE  + +
Sbjct: 126 SLLTFAFDIVAAPETALSDRQKTTLVLALARAAGHGGMAGGQALDLAAEKSAPDEAGIVL 185

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GAI+A A   ++ RLR FG+ +G+ FQLADDLLD   D  
Sbjct: 186 LQSMKTGALIRFACEAGAIIADAPAEDRRRLRAFGDKIGLAFQLADDLLDLTADAA 241


>gi|238852560|ref|ZP_04642970.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
 gi|238834706|gb|EEQ26933.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
          Length = 288

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 24/246 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L    ++ + +ID  L+D L           N      + Y+++ GGK++R  L  
Sbjct: 1   MN--LKDFQKKYTPQIDKFLEDHLASEVD------NPIFSKIMSYSVMAGGKRLRPLLFL 52

Query: 60  ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 N     + LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+
Sbjct: 53  ATLETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHRKWGEAEAIL 112

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176
           AG+ LL    + I+           + L + ++  +G  GM+GGQ LDI     D  +  
Sbjct: 113 AGDALLPLGIQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKEN 166

Query: 177 ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230
              +  ++ +KTG L+  + +  A+ A AS +E +RL  F +  G  +Q+ DDL+D    
Sbjct: 167 AKVIDQMEWLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVET 226

Query: 231 EEDLPK 236
           E++  K
Sbjct: 227 EQEAGK 232


>gi|256821709|ref|YP_003145672.1| polyprenyl synthetase [Kangiella koreensis DSM 16069]
 gi|256795248|gb|ACV25904.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069]
          Length = 296

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 87/231 (37%), Positives = 128/231 (55%), Gaps = 10/231 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           +L+    R+  IL+  L    +     +   L  A+RY AL GGK+IR  LV        
Sbjct: 6   QLEHWQDRVFKILNTRLPSDDT-----NPQSLHQAMRYGALNGGKRIRPTLVYMTGQALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
              +       A+E IHCYSL+HDDLP+MD+  +RRGKPT HIQ+ E TAI+AG+ L T 
Sbjct: 61  AELIDLDSPALAVELIHCYSLVHDDLPAMDDDDLRRGKPTCHIQFGEATAILAGDALHTQ 120

Query: 127 AFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183
           AFE ++S     K    + Q++  L    G  GM GGQ +D++   + ID   +  + +M
Sbjct: 121 AFEELASHPFSAKAQPQQLQMIQLLAQASGSLGMGGGQAIDLESTSKIIDLATLEQMHRM 180

Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  +   GA+ A   +Q E++ L  + + +G+ FQ+ DD+LD E D
Sbjct: 181 KTGALIKASVLLGALCAGKLNQLEQDALERYADAIGLAFQVKDDILDIESD 231


>gi|218682196|ref|ZP_03529797.1| Polyprenyl synthetase [Rhizobium etli CIAT 894]
          Length = 304

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 119/236 (50%), Positives = 164/236 (69%), Gaps = 3/236 (1%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N+  I+ +LD LL       +    + L SA+ YA+L GGK++R FLV E 
Sbjct: 6   DTFETRLKHNAHEIEALLDILLSPATLSDEIARPETLRSAMHYAVLNGGKRMRPFLVVES 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF  +   ALRVGAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+
Sbjct: 66  AALFGGDAGAALRVGAALECVHCYSLVHDDLPAMDDDDLRRGKPTVHIKFDEATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            LLTYAF+II++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  
Sbjct: 126 SLLTYAFDIIAAPETALPDTSKAALVLALARAAGLGGMAGGQALDLAAERQAPDEAGIIR 185

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q MKTGAL+ FACE+GAI++  S +++ RLR FGE +G+ FQLADD+LD   D  
Sbjct: 186 LQAMKTGALIRFACEAGAIISAGSPDDRLRLRAFGEKIGLAFQLADDILDLTSDTA 241


>gi|254674120|emb|CBA09904.1| geranyltranstransferase [Neisseria meningitidis alpha275]
          Length = 298

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/237 (31%), Positives = 116/237 (48%), Gaps = 8/237 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKTWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L         +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H++Y E TA++ G
Sbjct: 59  ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVKYGEATALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           + L T AF+++S P         +   +L+               L    + + +  +  
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|154244163|ref|YP_001415121.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
 gi|15553715|gb|AAL01997.1|AF408846_1 farnesyl diphosphate synthase [Xanthobacter autotrophicus Py2]
 gi|154158248|gb|ABS65464.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
          Length = 308

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 101/250 (40%), Positives = 150/250 (60%), Gaps = 13/250 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L  +L  ++   +  L   L   A   +    +RL++A+R+ AL GGK++R FLV 
Sbjct: 1   MTFSLKDRLDASAAATEARLALALADAALPGERLRPERLMAAMRHGALGGGKRLRPFLVI 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A+LF +    A+    AIECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE TAI+A
Sbjct: 61  ESAALFGIPADQAVTAATAIECIHCYSLVHDDLPAMDDDDLRRGRPTVHRAFDEATAILA 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-------- 171
           G+GLLT AF++++         +R  L+ +L    G+ GM+GGQMLD+  E         
Sbjct: 121 GDGLLTLAFDLLAGEDAHPDPAVRIALVRALARASGIGGMVGGQMLDLAAEGRFSGGTPL 180

Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            + E  +  +Q MKTGAL+  + E+GA++  A+ +E+  L  +G  LG  FQ+ADD+LD 
Sbjct: 181 ALAEDAIRDLQAMKTGALLAVSVEAGALLGGATADERAALLAYGRALGAAFQIADDILDV 240

Query: 231 EE---DLPKK 237
           E    ++ KK
Sbjct: 241 EGTAEEVGKK 250


>gi|149913258|ref|ZP_01901792.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
 gi|149813664|gb|EDM73490.1| decaprenyl diphosphate synthase [Roseobacter sp. AzwK-3b]
          Length = 333

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 9/225 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           ++ ++ +D+ +  +       M ++H  R+     + +  GGK++R  L    A +    
Sbjct: 12  EQLARHLDSKMAAVNTLIRERMASRHAPRIPEVTAHLVEAGGKRLRPMLTLATADMCGYG 71

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   AF
Sbjct: 72  GAFDVHLAATVEFIHTATLLHDDV--VDESQQRRGRPTANLLWDNKSSVLVGDYLFARAF 129

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++  P      N+R   +LS    +  +G +  Q+   +D   DE     + + KT AL
Sbjct: 130 QLMVEPG-----NLRVLDILSNAAAVIAEGEVL-QLSAARDLKTDENIYLQVVRGKTAAL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              A E G ++A A + + + L  +G+ LGI FQ+ DDLLD + D
Sbjct: 184 FSAATEVGGVIADAPEAQIKALFDYGDALGIAFQIVDDLLDYQGD 228


>gi|152980282|ref|YP_001354685.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille]
 gi|151280359|gb|ABR88769.1| octaprenyl-diphosphate synthase [Janthinobacterium sp. Marseille]
          Length = 334

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 117/235 (49%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   +  +   +DT++   L    + +  Q  D ++SA      GGK+IR  LV   A+ 
Sbjct: 18  LIQPIAADLNAVDTVIRQKLHSEVA-LVNQIADYIISA------GGKRIRPVLVLLMANA 70

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +        ++ A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 71  YGYRGTDHHQLAAVVEFIHTATLLHDDV--VDESSLRRGRKTANALFGNAASVLVGDFLY 128

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++ S       +IR   +L+   N+  +G +  Q+L++ D  + E +   + + K
Sbjct: 129 SRAFQMMVSVG-----DIRIMQILADATNVIAEGEVL-QLLNMHDPDVSEERYTQVIRSK 182

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           T  L   A + G ++A AS +E E    +G +LG  FQL DD+LD      D+ K
Sbjct: 183 TAKLFEAAAQLGTLIAGASDDEIEAAAEYGRSLGTAFQLIDDVLDYSGQADDIGK 237


>gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4]
 gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis RH4]
 gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169]
 gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1]
 gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1]
 gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7]
 gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E]
 gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72]
          Length = 348

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 108/217 (49%), Gaps = 16/217 (7%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTEC----------ASLFNVNHLTALRVGAAIECIHC 84
            + L  A RYA+  GGK++R  LV                         R   A+E IH 
Sbjct: 74  PEPLNKACRYAMSNGGKRVRPLLVLSTFLTLIKTGHQTDDLTKKIQMLFRAMMAVELIHS 133

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLP MD+  +RRG+PT HI Y E  A++AG+ L + AFE++     +   +   
Sbjct: 134 YSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSADDAI 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA 202
              L+   +   + M+ GQMLDI+ E   + + ++  I + KTGAL+  A   GAI A  
Sbjct: 194 AYKLAKLLSCRARRMVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADV 253

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
             +    L+ +   +G+ FQ+ DD+LD   D   L K
Sbjct: 254 QTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGK 290


>gi|332184586|gb|AEE26840.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Francisella cf.
           novicida 3523]
          Length = 293

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 9/222 (4%)

Query: 17  DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           + I+ D     +         +  L+ A+ Y+   GGK+IR+  V        ++     
Sbjct: 4   ENIIKDFEIFAKNVFAQFDCVSKTLIKAMHYSFFSGGKRIRAQFVYAIGEALAIDKADCD 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +V  AIE IH YSLIHDDLP+MDN  +RRGKPT HI+++E TAI+AG+ L + AFEI+  
Sbjct: 64  KVAFAIESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQSLAFEILQD 123

Query: 134 PKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
                 D  R + +        G  GM+GGQ LDI+ E   ++  ++ ++   KT  +  
Sbjct: 124 IN--CSDIARLKKINKFFAQCCGADGMVGGQQLDIEGENKKLNLEELQILHTNKTAKMFR 181

Query: 191 FACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCE 231
                  I++    +E E  L    + +G+ FQ+ DD+LD  
Sbjct: 182 ACIVLPYILSQNQNDEIENLLVKLADLIGLCFQIKDDILDVT 223


>gi|186940997|dbj|BAG31127.1| geranyltranstransferase [Xanthomonas perforans 91-118]
          Length = 291

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 1/209 (0%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+      T    RL +A+R+A+LGG K++R  LV    +LF            A+E IH
Sbjct: 17  LEAGLPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     +  + 
Sbjct: 77  AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATASASAELRVS 136

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               L+               +D   +      +  +  +KTGAL+  A   GA+   A+
Sbjct: 137 WMQSLATAAGAAGMCGGQALDIDATGQLQSLQDLQRMHALKTGALIRAAVRMGALTGCAA 196

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 197 AADQQRLDEFADALGLAFQVRDDILDVES 225


>gi|187476774|ref|YP_784798.1| octaprenyl-diphosphate synthase [Bordetella avium 197N]
 gi|115421360|emb|CAJ47865.1| octaprenyl-diphosphate synthase [Bordetella avium 197N]
          Length = 321

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 113/234 (48%), Gaps = 16/234 (6%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   L + + ++ K +D ++ + L      ++T  +  + +       GGK++R  +V 
Sbjct: 1   MNLPALIAPITDDMKAVDAVIRERLNSEVVLIRTIGDYIIGA-------GGKRMRPAMVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ 
Sbjct: 54  MVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + +FE++    +     +R   +LS    +  +G +  Q+L++ D  + + +   
Sbjct: 112 GDYLYSRSFEMMVEANS-----MRIMQILSEATTVIAEGEVL-QLLNVHDPEVSQERYLQ 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A + GA++A A+  ++     +G ++G  FQL DD+LD   D
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHIGTAFQLIDDVLDYSGD 219


>gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
 gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
          Length = 294

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L             +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----ADNVVPTQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L    ++ L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDADA-LSPVQQAALVRELALASGSIGMAGGQAIDLASVGLKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADAMAALDVYAGAVGLAFQVVDDILDVTTDSA 231


>gi|148260202|ref|YP_001234329.1| polyprenyl synthetase [Acidiphilium cryptum JF-5]
 gi|326402853|ref|YP_004282934.1| geranyltranstransferase [Acidiphilium multivorum AIU301]
 gi|146401883|gb|ABQ30410.1| farnesyl-diphosphate synthase [Acidiphilium cryptum JF-5]
 gi|325049714|dbj|BAJ80052.1| geranyltranstransferase [Acidiphilium multivorum AIU301]
          Length = 301

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/220 (44%), Positives = 141/220 (64%), Gaps = 8/220 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+T LD LL      +       L+ A+RYA+L GGK++R FLV E A LF+VN   A+R
Sbjct: 21  IETELDVLLP-----LPEGEERPLVEAMRYAVLGGGKRMRGFLVIETARLFSVNITCAVR 75

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V AA+E +H YSL+HDDLP+MD+  +RRGKP+ H  +DE TAI+AG+ L T AFE+++ P
Sbjct: 76  VAAAVEMLHAYSLVHDDLPAMDDDDLRRGKPSCHKAFDEATAILAGDALQTRAFEVLAEP 135

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFA 192
            T     +R +L+L+L    G +GM+GGQM+DI  E        +  +Q +KTG L+ F+
Sbjct: 136 DTHSDPEVRCELVLALAAASGARGMVGGQMIDIVSEGRQLEPPVITRLQALKTGRLIQFS 195

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E+GAI+  A   ++  +  +G +LG  FQ+ADD+LD E 
Sbjct: 196 AEAGAILGRAPGPQRHHIAGYGRDLGAAFQIADDILDEEG 235


>gi|224823689|ref|ZP_03696798.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
 gi|224604144|gb|EEG10318.1| Polyprenyl synthetase [Lutiella nitroferrum 2002]
          Length = 360

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
             S L ++ + +D ++   L      ++ Q  + ++SA      GGK++R  L       
Sbjct: 44  FRSLLADDMQTVDRVIRARLHSDVVLIR-QVAEYIISA------GGKRLRPVLTLLAGKA 96

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +        + A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 97  LDYRGEHLHELAAMIEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDFLY 154

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++ + +     N+    +++   NI  +G +  Q+L+I +  + E Q   + + K
Sbjct: 155 TRAFQMMVTTR-----NMAILEVMAEATNIIAEGEVL-QLLNIGNTDVTEAQYLQVIQYK 208

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L   A   GA++A AS  +++ L  +G +LG  FQ+ DD+LD   D  
Sbjct: 209 TAKLFEAASRVGALIAAASPEQEKALADYGMHLGTAFQIIDDVLDYSGDAE 259


>gi|119472098|ref|ZP_01614329.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Alteromonadales bacterium TW-7]
 gi|119445118|gb|EAW26411.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Alteromonadales bacterium TW-7]
          Length = 295

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/234 (35%), Positives = 126/234 (53%), Gaps = 9/234 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            +   ++     + T L+    Q         +  +  A  Y+L  GGK++R FLV    
Sbjct: 2   SIKDYIERAQIDVATTLNSYFEQ-----PLDSDKTIKEATHYSLFNGGKRLRPFLVYAVG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +          + AAIECIH YSL+HDDLP+MD+  +RRG PT HI Y E  AI+AG+ 
Sbjct: 57  EMLGAKKSDLDVLAAAIECIHSYSLVHDDLPAMDDDDLRRGYPTCHIVYGEAQAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
           L T AFE+I++         + +++ +L H  G++GM+ GQ LDI   D+ +   ++  I
Sbjct: 117 LQTLAFELIATHNFNCSAQSQVKMIAALAHASGIEGMVAGQGLDIAATDKVVSVQELERI 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            K+KTGAL+  A   GA+ +  A +   E L  FG  +G+ FQ+ DD+LD E D
Sbjct: 177 HKLKTGALINCAITLGALCSEKADEQTLENLSVFGYAIGLAFQVHDDILDVEGD 230


>gi|300361959|ref|ZP_07058136.1| geranyltranstransferase [Lactobacillus gasseri JV-V03]
 gi|300354578|gb|EFJ70449.1| geranyltranstransferase [Lactobacillus gasseri JV-V03]
          Length = 288

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 24/246 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L    +  + +ID  L+D L           N      + Y+++ GGK++R  L  
Sbjct: 1   MN--LKDFQKIYTPQIDKFLEDHLASEVD------NPIFSKIMSYSVMAGGKRLRPLLFL 52

Query: 60  ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 N     + LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+
Sbjct: 53  ATLETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAIL 112

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176
           AG+ LL    + I+           + L + ++  +G  GM+GGQ LDI     D  +  
Sbjct: 113 AGDALLPLGIQWITEGSNS------AALAIIISQAVGPNGMVGGQYLDIDSTNNDLVKEN 166

Query: 177 ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230
              +  ++ +KTG L+  + +  A+ A AS ++ +RL  F +  G  +Q+ DDL+D    
Sbjct: 167 VKVIDQMEWLKTGCLIEASVKMAAVYAGASTDQVDRLDNFSKQFGRSYQIYDDLVDVVET 226

Query: 231 EEDLPK 236
           E++  K
Sbjct: 227 EQEAGK 232


>gi|167647277|ref|YP_001684940.1| polyprenyl synthetase [Caulobacter sp. K31]
 gi|167349707|gb|ABZ72442.1| Polyprenyl synthetase [Caulobacter sp. K31]
          Length = 294

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 99/233 (42%), Positives = 142/233 (60%), Gaps = 6/233 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
            L  ++ + +  +   LD+LL +           RL  A+RYA LG GK++R F   E  
Sbjct: 3   DLEKRIVQAADIVTVALDELLPRADGP-----ESRLTEAMRYAALGPGKRLRPFFALETG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F++     LR   A+ECIH YSL+HDDLP+MD+  +RRG+PTVHIQYDE TAI+AG+ 
Sbjct: 58  KMFDLPERPVLRAACALECIHAYSLVHDDLPAMDDDDVRRGRPTVHIQYDEATAILAGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T AFEI++ P T    ++RS+L+  L    G +GM GGQM+D+     D   V  +Q+
Sbjct: 118 LQTAAFEIMAHPDTHDDGHVRSELVRKLAIASGAKGMAGGQMIDLLGVRDDLGAVARMQR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +KTGAL+ FA E   I+A A  +E+  L  F ++LG+ +Q+ DD+LD E D  
Sbjct: 178 LKTGALIAFAFEIPLIIARAKDSERSALMGFAQDLGLAYQIVDDILDEEGDEA 230


>gi|307129906|ref|YP_003881922.1| geranyltranstransferase [Dickeya dadantii 3937]
 gi|306527435|gb|ADM97365.1| geranyltranstransferase [Dickeya dadantii 3937]
          Length = 303

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/245 (35%), Positives = 131/245 (53%), Gaps = 14/245 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L  +L  + +RI+  L+  +           +  L+ A+ + ALLGGK++R FLV 
Sbjct: 1   MTDFLK-QLTAHHQRINATLNQFISTL-----PFQSSPLVEAMAHGALLGGKRLRPFLVY 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF ++        AA+ECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+A
Sbjct: 55  TTGQLFGISQNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILA 114

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++  P  ++ D  R  ++  L    G+ GM GGQ LD++ E   +D   
Sbjct: 115 GDALQTLAFSILADAPMPEVSDRDRLAMISELASASGVAGMCGGQALDLEAEGHQVDLLA 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEED-- 233
           +  I + KTGAL+  +   GA+ A          L  +   +G+ FQ+ DD+LD   D  
Sbjct: 175 LERIHRHKTGALIRASVRLGALAAGERGRLALPCLDRYANAVGLAFQVQDDILDVIGDSA 234

Query: 234 -LPKK 237
              K+
Sbjct: 235 TTGKR 239


>gi|118498042|ref|YP_899092.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
           [Francisella tularensis subsp. novicida U112]
 gi|194323267|ref|ZP_03057051.1| geranyltranstransferase [Francisella tularensis subsp. novicida
           FTE]
 gi|208779548|ref|ZP_03246893.1| geranyltranstransferase [Francisella novicida FTG]
 gi|254373397|ref|ZP_04988885.1| geranyltranstransferase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254374860|ref|ZP_04990341.1| geranyltranstransferase [Francisella novicida GA99-3548]
 gi|118423948|gb|ABK90338.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
           [Francisella novicida U112]
 gi|151571123|gb|EDN36777.1| geranyltranstransferase [Francisella novicida GA99-3549]
 gi|151572579|gb|EDN38233.1| geranyltranstransferase [Francisella novicida GA99-3548]
 gi|194322631|gb|EDX20111.1| geranyltranstransferase [Francisella tularensis subsp. novicida
           FTE]
 gi|208744509|gb|EDZ90808.1| geranyltranstransferase [Francisella novicida FTG]
 gi|332678764|gb|AEE87893.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Francisella cf.
           novicida Fx1]
          Length = 293

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 7/221 (3%)

Query: 17  DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           + I+ D     +         +  LLSA+ Y+   GGK+IR+  V        ++     
Sbjct: 4   ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  A+E IH YSLIHDDLP+MDN  +RRGKPT HI+++E TAI+AG+ L   AFEI+  
Sbjct: 64  KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
                 D ++ ++        G  GM+GGQ LDI+ E   +   ++ ++   KT  +   
Sbjct: 124 INYSDIDKLK-KINKLFAQYCGASGMVGGQQLDIEGENKKLKLEELQILHTNKTAKMFRA 182

Query: 192 ACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                 I++ + +   ++ L    + +G+ FQ+ DD+LD  
Sbjct: 183 CIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223


>gi|237730397|ref|ZP_04560878.1| geranyltranstransferase [Citrobacter sp. 30_2]
 gi|226905936|gb|EEH91854.1| geranyltranstransferase [Citrobacter sp. 30_2]
          Length = 299

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ   ++ +  L   +           N  ++  ++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVEQANQALSRFIAPL-----PFQNTPVVETMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSL+HDDLP+MD+  +RRG PT H+++ E  AI+AG+ 
Sbjct: 57  QMFGVSLSTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF IIS  P  ++ D  R  ++  L    G+ GM GGQ LD++ E   ++   +  
Sbjct: 117 LQTLAFSIISDAPMPEVTDRDRIAMISELAQASGIAGMCGGQALDLEAEGHQVELDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A     E    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRLGALSAGDKGRECLPILDKYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|33591927|ref|NP_879571.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I]
 gi|33571571|emb|CAE41057.1| octaprenyl-diphosphate synthase [Bordetella pertussis Tohama I]
 gi|332381344|gb|AEE66191.1| octaprenyl-diphosphate synthase [Bordetella pertussis CS]
          Length = 321

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 115/234 (49%), Gaps = 16/234 (6%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   L + + ++ K +DT++ D L      ++T  +  + +       GGK++R  +V 
Sbjct: 1   MNLPELIAPIADDMKAVDTVIRDRLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ 
Sbjct: 54  MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + +FE++        D++R   +LS    +  +G +  Q+L++ D  + + +   
Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQ 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A + GA++A AS  ++     +G ++G  FQL DD+LD   D
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGTAFQLVDDVLDYSGD 219


>gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
 gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
 gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668]
 gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
 gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305]
 gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98]
 gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14]
 gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91]
 gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9]
 gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210]
 gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894]
 gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177]
 gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112]
 gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215]
 gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576]
 gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
 gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
 gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
 gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
 gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
 gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13]
 gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
 gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
 gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
 gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
 gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668]
 gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
 gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305]
 gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
 gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
 gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13]
 gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
 gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576]
 gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
 gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
 gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
 gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
          Length = 294

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++   +R++T L   L        T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FDQWMRSVLERVETALGHYLP-----AGTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +        AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGASEAARDAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L  + ++ L+  L    G  GM GGQ +D+      +    +  + 
Sbjct: 118 QSQAFVALTDAAA-LPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  +   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231


>gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8]
 gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8]
          Length = 298

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 85/239 (35%), Positives = 134/239 (56%), Gaps = 14/239 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
            + L +   ++D  LD  L + A+      ++RL   +RY++LGG K++R  L    A  
Sbjct: 9   EAYLDQCRHQVDRELDRCLARNAT------SERLQETMRYSVLGGGKRVRPALCMAAARA 62

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +  TAL    A+E IH YSL+HDDLP+MD+  +RRG+PT HI +DE +AI+AG+ L 
Sbjct: 63  MGSDESTALAPACALELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASAILAGDALQ 122

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           T AF ++S     L D  R  ++  L    G QGM+GGQ +D++   + +   Q+  + +
Sbjct: 123 TLAFALLSDAPA-LSDRQRVTMISELARASGHQGMVGGQAIDLESVGQQLSVAQLETMHR 181

Query: 183 MKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KTGAL+  +   GA+ +   ++ +   L  +   LG+ FQ+ DDLLD E D   + K+
Sbjct: 182 HKTGALIEASVRLGALTSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGDTEVIGKR 240


>gi|293652046|pdb|3M9U|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367
 gi|293652047|pdb|3M9U|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367
 gi|293652048|pdb|3M9U|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367
 gi|293652049|pdb|3M9U|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367
 gi|312208182|pdb|3PDE|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Isoprenyl Diphosphate And Magnesium
 gi|312208183|pdb|3PDE|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Isoprenyl Diphosphate And Magnesium
 gi|312208184|pdb|3PDE|C Chain C, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Isoprenyl Diphosphate And Magnesium
 gi|312208185|pdb|3PDE|D Chain D, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Isoprenyl Diphosphate And Magnesium
          Length = 309

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 119/209 (56%), Gaps = 7/209 (3%)

Query: 29  SHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCY 85
           + +    + +L +A+ Y+ L GGK++R  L         V        R   A+E +H Y
Sbjct: 26  AILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTY 85

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLIHDDLP+MDN  +RRG+PT H+++    A +AG+GLLT AF+ +++  T L   +++ 
Sbjct: 86  SLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTA--TDLPATMQAA 143

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L+ +L    G  GM+ GQ  DIQ E ++   +Q+ ++ K KTGAL+ +A ++G I+  A 
Sbjct: 144 LVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAP 203

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +      F +  G+ FQ+ DD+LD   
Sbjct: 204 EAQWPAYLQFADAFGLAFQIYDDILDVVS 232


>gi|270263554|ref|ZP_06191823.1| geranyltranstransferase [Serratia odorifera 4Rx13]
 gi|270042438|gb|EFA15533.1| geranyltranstransferase [Serratia odorifera 4Rx13]
          Length = 306

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 128/240 (53%), Gaps = 10/240 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
                 +LQ   +R D  L D +          +   +++A+R+ ALLGGK++R FLV  
Sbjct: 7   QAAFSEQLQAFRQRADRALLDFIAPL-----PFNEGNMVAAMRHGALLGGKRLRPFLVYT 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F V+        AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E +AI+AG
Sbjct: 62  TGQMFGVSLNNLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEASAILAG 121

Query: 121 NGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           + L T AF I++      +    R  ++  L    G  GM GGQ LD++ E   ID   +
Sbjct: 122 DALQTLAFSILADADMPDVALRDRLAMVSELATASGAAGMCGGQSLDLEAEGRQIDLPAL 181

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +I + KTGAL+  A   GA+ A         +L  +   +G+ FQ+ DD+LD   +  K
Sbjct: 182 ELIHRHKTGALIRAAVRLGALAAGEPGRAALPQLDRYAAAIGLAFQVQDDILDVVGETEK 241


>gi|282877390|ref|ZP_06286213.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
 gi|281300442|gb|EFA92788.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
          Length = 324

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE  K ++  LD L  +       +    L   I Y L LGGK+IR  L+    +L+  +
Sbjct: 5   QEILKLVNNHLDSLADE-------RQPRHLYEPIEYVLSLGGKRIRPTLMLLAYNLYREH 57

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L     IE  H Y+L+HDDL  MD   +RRG  TVH ++D  TAI++G+ +L  A+
Sbjct: 58  PEDILMPACGIETYHNYTLLHDDL--MDQADLRRGHETVHKRWDANTAILSGDSMLVLAY 115

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGA 187
           + ++    Q + +   +++   T      G      +D +    + E +   + ++KT  
Sbjct: 116 QRMA----QCRPDKLKEVIDLFTQTALEIGEGQQYDMDFEHRNDVTEDEYIEMIRLKTSV 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+  A + GAI+  AS  +   L  FGE +G+ FQL DD LD   D  
Sbjct: 172 LLACALKIGAILGDASAEDANNLYRFGEKIGLAFQLQDDFLDVYGDSK 219


>gi|293400618|ref|ZP_06644763.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305644|gb|EFE46888.1| geranyltranstransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 280

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 10/209 (4%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            + ++  A++Y+L+ GGK+IR  ++      + +       V AAIE IH YSLIHDDLP
Sbjct: 16  QDSKVKDAMQYSLMAGGKRIRPQILLAALQCYGIEERVGYPVAAAIEMIHTYSLIHDDLP 75

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPT H+Q+DE TAI+AG+ LLT AF  +          +   ++ +L+  
Sbjct: 76  AMDDDTLRRGKPTCHVQFDEATAILAGDALLTQAF--LLGAMASEDAMVNCAIVKALSRY 133

Query: 154 IGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
            G  GM+ GQ+ D++    E +   ++  I   KTG L+       A + H  + +    
Sbjct: 134 AGADGMVLGQIKDLEGEVKEDLTLAELKDIHYYKTGRLLTLPLVCAAYLTHH-EEDIPAW 192

Query: 211 RCFGENLGIIFQLADDLLDCE---EDLPK 236
              G +LG+ FQ+ DD+LD     E+L K
Sbjct: 193 EQIGSDLGLSFQIQDDILDVTSTVEELGK 221


>gi|149183310|ref|ZP_01861750.1| HepT [Bacillus sp. SG-1]
 gi|148848968|gb|EDL63178.1| HepT [Bacillus sp. SG-1]
          Length = 320

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           DL+ +         +  L  A  + L  GGK+IR   V   A   + N  +   V  A+E
Sbjct: 15  DLIEKELKTAIDSRSPLLNEASLHLLSAGGKRIRPVFVLLSAKFGDYNINSIKNVAVALE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  Q+D  TA+  G+ +   + E ++    +   
Sbjct: 75  LIHSASLVHDDV--IDDADLRRGKPTIKSQWDNKTAMYTGDYIFARSLEYMTKIDNEDAH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I S  ++ LT           Q+ D      D        K KT  L+  +C+ GAI A
Sbjct: 133 KILSNAIVELTVGEI------EQIKDKYRFEQDLKDYLRRIKRKTALLIAVSCQLGAIAA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A     ++L  FG N+G+ FQ+ DD+LD    EE+L K
Sbjct: 187 GAPPEIHKKLYRFGYNVGMSFQITDDILDFTASEEELGK 225


>gi|311693395|gb|ADP96268.1| trans-hexaprenyltranstransferase [marine bacterium HP15]
          Length = 322

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 13  SKRI-DTILDDLLLQTASHMQTQHND-RLLSAI-RYAL-LGGKKIRSFLVTECASLFNVN 68
           ++RI DT+ DD        +Q   +D  L+  I +Y +  GGK++R  LV   +      
Sbjct: 3   AQRIYDTVADDFSRVNDLIIQRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSQAAGYE 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L++ A IE +H  +L+HDD+  +D   +RRG+ T + ++    +++ G+ L   AF
Sbjct: 63  ENDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANARWGNAPSVLVGDFLYARAF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++   K+     +R   +LS    +  +G +  Q++++++  + E Q   +   KT  L
Sbjct: 121 EMMVELKS-----LRIMDVLSHATAVIAEGEVM-QLMNVKNPDLTEEQYMKVIHNKTAML 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              A  +GA++AHAS  ++  L+ +G++LG+ FQL DD+LD + D  
Sbjct: 175 FEAASHTGALLAHASAEQELGLKDYGKHLGLAFQLVDDVLDYQGDAE 221


>gi|86139019|ref|ZP_01057590.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193]
 gi|85824250|gb|EAQ44454.1| decaprenyl diphosphate synthase [Roseobacter sp. MED193]
          Length = 332

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 116/232 (50%), Gaps = 16/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L +  + ++T++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 13  LAATLSDEMEAVNTLI-------QTRMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAR 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L        +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 66  LCGYEGAHHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + +F+++    +     ++   +L+       +G +  QM    +   DE     + + 
Sbjct: 124 FSRSFQLMVETGS-----LQVLDILANASATIAEGEVL-QMTAASNLATDEAVYLQVVRG 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT AL   A + G ++A A + + + L  +G+ LGI FQ+ADDLLD + D  
Sbjct: 178 KTAALFSAATQVGGVIAAAPETQIKGLFDYGDALGIAFQIADDLLDYQGDAA 229


>gi|89900061|ref|YP_522532.1| farnesyltranstransferase [Rhodoferax ferrireducens T118]
 gi|89344798|gb|ABD69001.1| Farnesyltranstransferase [Rhodoferax ferrireducens T118]
          Length = 327

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 108/230 (46%), Gaps = 17/230 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S + ++ + +D ++        +H        +    RY +  GGK++R  L+       
Sbjct: 13  SVIAQDMREVDQVI--------AHRLDSGVPLVGQVARYIIAAGGKRLRPALLLLICGAL 64

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                    + A +E IH  +L+HDD+  +D+  +RRG PT +  +    +++ G+ L +
Sbjct: 65  GFKGAQRFNLAAVVEFIHTSTLLHDDV--VDDSSLRRGNPTANETFGNPASVLVGDFLYS 122

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F+++   +     N+R   +L+   N+  +G +  Q++++ +  +DE     + + KT
Sbjct: 123 RCFQMMVDAQ-----NMRIMQVLADATNVIAEGEV-QQLMNMHNAELDEAGYLQVIRSKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L   +   GAI+A +S   +E    +G+ LG  FQ+ DD+LD   +  
Sbjct: 177 AKLFEASARVGAILAGSSPELEEICAEYGQALGTAFQVIDDVLDYTGEAA 226


>gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
 gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
 gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1]
 gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229]
 gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
 gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20]
 gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
 gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH]
 gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU]
 gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280]
 gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
 gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1]
 gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
 gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH]
 gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU]
 gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280]
 gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
 gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
 gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20]
 gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229]
          Length = 294

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++   +R++T L   L        T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FDQWMRSVLERVETALGHYLP-----AGTVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +        AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGASEAARDAASAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L  + ++ L+  L    G  GM GGQ +D+      +    +  + 
Sbjct: 118 QSQAFVALTDAAA-LPADRQAALVRELALASGSIGMAGGQAIDLASVGVALTRDALEKMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  +   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231


>gi|302348132|ref|YP_003815770.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans
           345-15]
 gi|302328544|gb|ADL18739.1| Farnesylgeranyl diphosphate synthase [Acidilobus saccharovorans
           345-15]
          Length = 338

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 11/208 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDL 92
            + L +A  + +  GGK++R  +V   A           A+ + +A+E  H ++L+HDD+
Sbjct: 29  PEELYNASLHLIKAGGKRLRPLVVLATARALGGVDAEARAIPLASAVEIFHNFTLVHDDI 88

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-IISSPKTQLKDNIRSQLMLSLT 151
             MDN   RRG PTVH  Y    AI AG+ + + +F  I+ S +  L +    + + +LT
Sbjct: 89  --MDNDDFRRGVPTVHKVYGVPLAITAGDLMFSLSFASILRSLEKGLDEEYVIKAVQALT 146

Query: 152 HNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                + +  GQ  D+   +   +D      +  +KTGAL+  + + GAI A A     E
Sbjct: 147 EAS--RKVAEGQGYDMLFERSWNVDAEDYLRMIYLKTGALVEASAKLGAIAAKAKDEVIE 204

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +  +G  +G+ FQ+ DD+L    D  K
Sbjct: 205 TMGEYGRLVGLAFQIRDDILGVFGDPSK 232


>gi|156973484|ref|YP_001444391.1| geranyltranstransferase [Vibrio harveyi ATCC BAA-1116]
 gi|156525078|gb|ABU70164.1| hypothetical protein VIBHAR_01174 [Vibrio harveyi ATCC BAA-1116]
          Length = 294

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L S  Q N+++++  L+ L               L+ A++Y  LLGGK++R FLV 
Sbjct: 1   MQETLTSYQQRNNQQLNQWLEQL---------PHQEQPLIQAMKYGLLLGGKRVRPFLVY 51

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +            +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ 
Sbjct: 52  ITGQMLGCKPEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILT 111

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           G+ L T AF I++        +N R +++ +L    G  GM  GQ LD   ++  +    
Sbjct: 112 GDALQTLAFTILAEGALNPNAENQRIKMVQALAQASGAGGMCLGQALDLGAENRRVSLAD 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 172 LEEIHRNKTGALINCAVKLGALAAGEKGLEVLPHLERYSKAIGLAFQVQDDILDIISDTE 231


>gi|120553786|ref|YP_958137.1| farnesyltranstransferase [Marinobacter aquaeolei VT8]
 gi|120323635|gb|ABM17950.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Marinobacter aquaeolei VT8]
          Length = 322

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 13  SKRI-DTILDDLLLQTASHMQTQHND-RLLSAI-RYAL-LGGKKIRSFLVTECASLFNVN 68
           ++RI DT+ DD        ++   +D  L+  I +Y +  GGK++R  LV   +      
Sbjct: 3   AQRIYDTVADDFSRVNDLIIKRLASDVPLVEKIAQYIIESGGKRLRPLLVLLASQAAGYQ 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L++ A IE +H  +L+HDD+  +D   +RRG+ T + ++    +++ G+ L   AF
Sbjct: 63  KDDHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANAKWGNAPSVLVGDFLYARAF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++   ++     +    +LS    +  +G +  Q++++++  + E Q  ++   KT  L
Sbjct: 121 EMMVELQS-----LPIMNVLSHATAVIAEGEVM-QLMNVKNPDLSEDQYMVVIHNKTAML 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              A  +GA++A AS+ ++  L+ +G++LG+ FQL DD+LD + D  
Sbjct: 175 FEAASHTGALLAKASKEQETALKDYGKHLGLAFQLVDDVLDYQGDAE 221


>gi|332534969|ref|ZP_08410787.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035587|gb|EGI72079.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 295

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 89/224 (39%), Positives = 130/224 (58%), Gaps = 6/224 (2%)

Query: 16  IDTILDDLLLQTASHM--QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           I+    D++     H        + + +A +Y L  GGK++R FLV     +   N    
Sbjct: 7   IERAQRDVVATLQQHFKQPLDTEETVKNATQYGLFNGGKRLRPFLVYATGKMLGANQQDL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             + AAIECIH YSL+HDDLP+MD+  +RRG+PT HI++ E  AI+AG+ L T AFE+I+
Sbjct: 67  HVLAAAIECIHSYSLVHDDLPAMDDDDLRRGRPTCHIEFGEANAILAGDALQTLAFELIA 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190
           + K       + +++ +L H  GL+GM+GGQ LDI   D+ I   ++  I K+KTGAL+ 
Sbjct: 127 NHKFTCSSQTQVKMIATLAHASGLEGMVGGQGLDIAATDKVITVQELARIHKLKTGALIN 186

Query: 191 FACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A   GA+ +  A Q   E L  FG  +G+ FQ+ DD+LD E D
Sbjct: 187 CAITLGALCSEKADQQTLENLSIFGYAIGLAFQVHDDILDVEGD 230


>gi|224418966|ref|ZP_03656972.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
           98-5491]
 gi|253827914|ref|ZP_04870799.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491]
 gi|313142478|ref|ZP_07804671.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
           98-5491]
 gi|253511320|gb|EES89979.1| geranyltranstransferase [Helicobacter canadensis MIT 98-5491]
 gi|313131509|gb|EFR49126.1| geranylgeranyl pyrophosphate synthase [Helicobacter canadensis MIT
           98-5491]
          Length = 288

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 121/235 (51%), Gaps = 13/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L S   E         +  L+  +  + + H     +     L GGK+ R  L+  
Sbjct: 1   MTEKLHSLFSEF--------ESYLISQSPKVPSFHPYYEKALWEMVLSGGKRFRPKLLLS 52

Query: 61  CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                       A     A+E +H YSLIHDDLP+MDN  +RRG PT+H +YDE  AI+ 
Sbjct: 53  VVYANKAKFASKAFAPALALEILHTYSLIHDDLPAMDNALLRRGVPTLHHKYDECGAILV 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQV 177
           G+GL T++F  I+  K++LK  I+++L+  L++N G+ GM+ GQ LD   E   +   ++
Sbjct: 113 GDGLNTHSFYCIA--KSKLKPKIKNKLIEILSYNGGIHGMVLGQALDCYFEKQTLPLEKL 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KT  L+  A + G I+A   +   ++L   G +LG+ FQ+ DD++D  +
Sbjct: 171 RTIHLNKTAKLIAAALQMGGIIAKCDKKFCQKLYKIGLDLGLFFQIRDDIIDATQ 225


>gi|160915116|ref|ZP_02077329.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
 gi|158432915|gb|EDP11204.1| hypothetical protein EUBDOL_01124 [Eubacterium dolichum DSM 3991]
          Length = 280

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 10/208 (4%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           + ++  A+ Y+LL GGK+IR  L+      + +         AAIE IH YSLIHDDLP+
Sbjct: 17  DSKVKEAMLYSLLAGGKRIRPQLLFSALKAYGIAEEKGFPCAAAIEMIHTYSLIHDDLPA 76

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PT HIQ+DE TAI+AG+ LLT AF  +          +  + ++S     
Sbjct: 77  MDDDTLRRGRPTCHIQFDEATAILAGDALLTQAFHEVLKSDATASQLVSLESLIS--SYS 134

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           G  GM+ GQ+ D++ E    +    +  + + KTG L+       A++A+  + + E  +
Sbjct: 135 GANGMVLGQIYDLEAEGRCDVSIEALQRVHEYKTGKLITLPLLCAAVLANH-EEDFEVWK 193

Query: 212 CFGENLGIIFQLADDLLDCE---EDLPK 236
             G  +G+ FQ+ DD+ D     E+L K
Sbjct: 194 SIGYAMGLSFQIQDDVFDVTSTCEELGK 221


>gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
          Length = 294

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++   +R++T L   L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FDQWMRSVLERVETALGHYLP-----AETVAPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +        +A+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGASEAALNAASSALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++     L  + ++ L+  L    G  GM GGQ +D+      +    +  + 
Sbjct: 118 QSQAFVALTDAAA-LPADRQAALVCELALASGSIGMAGGQAIDLASVGVALTRDALETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  +   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRASVRMGALAGETPSGDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231


>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 295

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S    +  R++  L+ L       +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQALSQTRVNAALESLFQAPGPELA-----RLYDAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGEARDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  + +P    +D   R Q++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEASVRLGALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|319761641|ref|YP_004125578.1| polyprenyl synthetase [Alicycliphilus denitrificans BC]
 gi|317116202|gb|ADU98690.1| Polyprenyl synthetase [Alicycliphilus denitrificans BC]
          Length = 349

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 15/232 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
                + + ++ + +D ++   L Q++  +       ++SA      GGK++R  L+   
Sbjct: 30  TAATLALIADDMREVDKVIAARL-QSSVPLVGSVAQYIISA------GGKRLRPALLLLT 82

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                        + A +E IH  +L+HDD+  +D   +RRG+PT +  +    +++ G+
Sbjct: 83  CGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANEAFGNPASVLVGD 140

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L T +F+++    +     +R   +L+   N+  +G +  Q+++  D  +DE     + 
Sbjct: 141 FLHTRSFQMMVEAGS-----MRILQVLADATNVIAEGEV-QQLMNTHDASLDEAGYLHVI 194

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KT  L   +    AI+A ++ + ++    +G+ LG  FQ+ DD+LD + D
Sbjct: 195 RSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGD 246


>gi|56708589|ref|YP_170485.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110671060|ref|YP_667617.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301456|ref|YP_001121424.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|224457771|ref|ZP_03666244.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254371220|ref|ZP_04987222.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875451|ref|ZP_05248161.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56605081|emb|CAG46195.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321393|emb|CAL09578.1| Geranyltranstransferase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049233|gb|ABO46304.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151569460|gb|EDN35114.1| geranyltranstransferase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841450|gb|EET19886.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159817|gb|ADA79208.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 293

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 7/221 (3%)

Query: 17  DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           + I+ D     +         +  LLSA+ Y+   GGK+IR+  V        ++     
Sbjct: 4   ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  A+E IH YSLIHDDLP+MDN  +RRGKPT HI+++E TAI+AG+ L   AFEI+  
Sbjct: 64  KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
                 D ++ ++        G  GM+GGQ LDI+ E   +   ++ ++   KT  +   
Sbjct: 124 INYSDIDKLK-KINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHTNKTAKMFRA 182

Query: 192 ACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                 I++ + +   ++ L    + +G+ FQ+ DD+LD  
Sbjct: 183 CIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223


>gi|167764761|ref|ZP_02436882.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC
           43183]
 gi|167697430|gb|EDS14009.1| hypothetical protein BACSTE_03152 [Bacteroides stercoris ATCC
           43183]
          Length = 324

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 12/222 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +    A     +    L   + Y L +GGK+IR  L+    +L+  +        
Sbjct: 6   ELLDKINSHIADLQFERTPKGLYDPVAYVLSMGGKRIRPVLMLMAYNLYKEDVRPVFSPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A++ ++    
Sbjct: 66  TGIEVYHNYTLLHDDL--MDRADKRRGKETVHKVWNDNTAILSGDAMLVLAYQFMAQCPA 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
           +    +     L+         +  GQ +D+  E      E +   + ++KT  L+  + 
Sbjct: 124 EHLKAVMDLFSLT------ALEICEGQQMDMDFEQRSDVKEEEYLEMIRLKTSVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + GA++  AS  + ERL  FG N+G+ FQL DDLLD   D  
Sbjct: 178 KIGALLGGASAEDAERLYDFGMNMGVAFQLKDDLLDVYGDTA 219


>gi|160880644|ref|YP_001559612.1| polyprenyl synthetase [Clostridium phytofermentans ISDg]
 gi|160429310|gb|ABX42873.1| Polyprenyl synthetase [Clostridium phytofermentans ISDg]
          Length = 335

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 45/271 (16%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           +  +  KL + ++    ++   L +     +T     +  A+ Y+LL GGK+IR  ++ E
Sbjct: 4   DTNIEEKLHQKAETFAQMMTAYLPKEQGQQKT-----IFDALSYSLLAGGKRIRPIILLE 58

Query: 61  CASLFNVNHLT-ALRVG-------------------------AAIECIHCYSLIHDDLPS 94
                       ALR                            A+E IH YSL+HDDLP+
Sbjct: 59  TYQALKEQEKGGALRASQLDIINENADFSWFKTLDDIVTKFSVALEMIHTYSLVHDDLPA 118

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-----------NIR 143
           MDN   RRGK T H +Y E   I+AG+ LL  AFE+++     +KD           +  
Sbjct: 119 MDNDEYRRGKLTTHAKYGEDMGILAGDALLNGAFELVAEAFANIKDIENSTDAITLYDRV 178

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAH 201
           S+    L+   G+ GM+GGQ++D++     + + ++  I ++KTGAL+  +   GAI++ 
Sbjct: 179 SRAYQMLSSRSGMYGMIGGQVVDVERTGSVLSKEELLFIYELKTGALLEASFLIGAILSG 238

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A+Q E  R     + +G+ FQ+ DD+LD   
Sbjct: 239 ANQEELIRFTKIAKKVGLAFQIQDDILDVTS 269


>gi|163790196|ref|ZP_02184629.1| geranyltranstransferase [Carnobacterium sp. AT7]
 gi|159874471|gb|EDP68542.1| geranyltranstransferase [Carnobacterium sp. AT7]
          Length = 299

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 76/224 (33%), Positives = 126/224 (56%), Gaps = 7/224 (3%)

Query: 17  DTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           + ++     +   ++  +    ++L  A+ Y++  GGK+IR  L+         +     
Sbjct: 8   ENVIPSFEKEMLDYIGKELTKKEKLHEAMSYSIAAGGKRIRPLLLLATIQSLGGDIKKGY 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              AA+E IH YSLIHDDLP+MD+  +RRGKPT HI Y E  AI+AG+ LLT AFEII+ 
Sbjct: 68  AASAALEFIHTYSLIHDDLPAMDDDDLRRGKPTSHIVYGEDIAILAGDALLTQAFEIIAD 127

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCF 191
             +      + +L+ +L  + G +GM+ GQM DIQ E   ++  ++  I + KTG L+ F
Sbjct: 128 --SDESSEKKVKLISALAKSAGPKGMILGQMADIQGEKKSLNLEELQFIHRNKTGELLKF 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              +  ++A  +   +E+L  + E++G+ +Q+ DD+LD   D+ 
Sbjct: 186 PIYAACVIADTTTEIEEQLMGYAEHIGLAYQIRDDILDVIGDVA 229


>gi|222153401|ref|YP_002562578.1| geranyltranstransferase [Streptococcus uberis 0140J]
 gi|222114214|emb|CAR42776.1| putative geranyltranstransferase [Streptococcus uberis 0140J]
          Length = 289

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 17/237 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           +  K+ID  +     + A       +++L  A+ Y++  GGK+IR  L  E      +  
Sbjct: 2   DKLKKIDQTIHAFYCEKA-----VISEKLNEAVLYSINAGGKRIRPILFLEVIEALQIPL 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             +  +  AA+E IH  SLIHDDLP+MDN   RRG+ T H ++DE TAI+AG+ L   AF
Sbjct: 57  TESHFKAAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAF 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++   T    ++   L+ SL+   G  GM+GGQMLD+  E   ++   + +I + KTG
Sbjct: 117 GMLAE--TDFPTDVTVDLVRSLSSASGTFGMVGGQMLDMAAEGKKLNLKNLQLIHRHKTG 174

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE------EDLPKK 237
            L+ +   + A +A   +N        G  +G+ FQ+ DD+LD           PKK
Sbjct: 175 QLLAYPFWAAARVAQLDENLLATFLEIGMIIGLAFQVRDDILDITANFEEIGKTPKK 231


>gi|313891715|ref|ZP_07825320.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
 gi|313119709|gb|EFR42896.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
          Length = 284

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 85/228 (37%), Positives = 132/228 (57%), Gaps = 10/228 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E    I+  L  LL       Q   +  L  ++ Y+LL  GK+IR  L      +F V
Sbjct: 6   LKEKRNLINKHLAGLL-----KTQRPEHKILFDSMNYSLLSNGKRIRGCLFLFILEMFKV 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++L  L + A++EC+H YSLIHDDLP MDN   RRG  T H +Y E  A+ AG+ LLT+A
Sbjct: 61  DYLQYLDIAASVECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
           F++IS  K   KD  +   +LS+    G +GM+ GQ   + I++  I+  ++ ++ K KT
Sbjct: 121 FQLISQAKFSAKDRCKLIEILSIA--AGAEGMVAGQVHDIQIENRSIELDELKLLDKFKT 178

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           G ++    +    + H S ++ E+LR F ++LG++FQ+ DD+LD +ED
Sbjct: 179 GRMIKAPVDMAIQLTHMSISDAEQLRKFAKHLGLLFQITDDILDYKED 226


>gi|239817188|ref|YP_002946098.1| trans-hexaprenyltranstransferase [Variovorax paradoxus S110]
 gi|239803765|gb|ACS20832.1| Trans-hexaprenyltranstransferase [Variovorax paradoxus S110]
          Length = 345

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 15/219 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
            +D ++   L  T   + +Q +  ++SA      GGK++R  L+   +            
Sbjct: 39  EVDRVIAQRL-DTGVPLVSQVSKYIISA------GGKRLRPALLLLMSGALGYTGEQRFN 91

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+PT +  +    +++ G+ L + AF+++   
Sbjct: 92  LAAVVEFIHTATLLHDDV--VDESTLRRGRPTANESFGNPASVLVGDFLYSRAFQMMLDA 149

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                +N+R   +L+   N+  +G +  Q++++ D  +DE+    + + KT  L   +  
Sbjct: 150 -----NNMRIMQILAEATNVIAEGEVL-QLMNMHDATLDESAYLRVIRSKTAKLFEASTR 203

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A++A A+   +E    +G+ LG  FQ+ DD+LD   D
Sbjct: 204 LAAVLAGATPEVEEACATYGQALGTAFQVIDDVLDYAGD 242


>gi|209559666|ref|YP_002286138.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase / Geranylgeranyl pyrophosphate
           synthetase [Streptococcus pyogenes NZ131]
 gi|209540867|gb|ACI61443.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase / Geranylgeranyl pyrophosphate
           synthetase [Streptococcus pyogenes NZ131]
          Length = 221

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/219 (33%), Positives = 121/219 (55%), Gaps = 6/219 (2%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRV 75
             +D+ + +         ++ L+ AI Y++  GGK+IR  ++ E    F V+   A   +
Sbjct: 5   ARIDEAIRRYYKTTSNGVSEELIDAILYSVDSGGKRIRPLILLEMIEGFGVSLQNAHFDL 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  SLIHDDLP+MDN   RRG+ T H Q+ E TAI+AG+ L    F +I+   
Sbjct: 65  AAALEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKQFGEATAILAGDSLFLDPFGLIAQA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFAC 193
            +L   ++  L+  L+   G  GM+GGQMLD+  +++ +   Q+ +I   KTG L+ F  
Sbjct: 124 -ELNSEVKVALIQELSLASGTFGMVGGQMLDMKGENQALSLPQLSLIHLNKTGKLLTFPF 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ A++   +   +++L   G  +G  FQ+ DD+LD   
Sbjct: 183 KAAALVTEQAITVRQQLEQAGMLIGHAFQIRDDILDVTA 221


>gi|113971065|ref|YP_734858.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4]
 gi|113885749|gb|ABI39801.1| farnesyl-diphosphate synthase [Shewanella sp. MR-4]
          Length = 293

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 97/238 (40%), Positives = 138/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L + ++E   R+    DD L Q  S ++     +L +A+ + ALLGGK+IR FLV     
Sbjct: 2   LVNAIKEYQLRV----DDQLKQRFSTLE-DTAPQLKAAMSHGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVPLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++   T +       ++ +L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVTGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A ++E + +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMIEFAHAVGLAFQVQDDILDIIATTEELGK 234


>gi|261366961|ref|ZP_05979844.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176]
 gi|282571079|gb|EFB76614.1| geranyltranstransferase [Subdoligranulum variabile DSM 15176]
          Length = 295

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 17/238 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
                Q + +R++ + D+ L Q A          +  A RY+LLGG K+IR+ L      
Sbjct: 10  FTKWAQMSEERLEKLCDEYLPQKA---------EIGQAARYSLLGGGKRIRAVLALSACE 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       AL    A+E +HCYSLIHDD+P MDN   RRG+P+ H QY E TA++A + L
Sbjct: 61  LAGKPAELALDYACALEMLHCYSLIHDDMPCMDNDDFRRGRPSCHKQYGEATALLAADAL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
           +T AFE+I+  +   +   R+  +L      G +GML GQ LD   + +   E Q+  + 
Sbjct: 121 VTAAFEVIAQAELSPESRCRAAAVL--AKAGGARGMLYGQELDKKYEAQSATEQQLLELH 178

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             KTGAL+  A E G I A A+   ++ L+ +   LG++FQ+ DD+LD     E+L K
Sbjct: 179 AHKTGALILAAVELGCIAADAAPATRQALQRYAAELGLVFQIVDDILDVTSTTEELGK 236


>gi|225573687|ref|ZP_03782442.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038980|gb|EEG49226.1| hypothetical protein RUMHYD_01883 [Blautia hydrogenotrophica DSM
           10507]
          Length = 295

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN     +L   ++ I+ ++   L +      T     L  A+ Y+ L GGK++R  ++ 
Sbjct: 1   MN--FKEELNLKTQEIEQLIRRYLPKEEGFAST-----LARAMNYSMLAGGKRLRPLMMQ 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +F            A+E IH +SLIHDDLP++DN   RRG+ T    + E   +I+
Sbjct: 54  EVYRMFGGTQRVIEPFMVAMEMIHTHSLIHDDLPALDNDEYRRGRETTWKVFGEDMGVIS 113

Query: 120 GNGLLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G  LL YA+E+ +S  +   +       +  L    G+ GMLGGQ +D++++   +D   
Sbjct: 114 GAALLNYAYEVALSGFELTDRTERVVLALRVLAAKTGMYGMLGGQSVDVENDRKPLDLQL 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I + KT ALM  +   GAI+A A   +  ++      +G+ FQ+ DD+LD     E+
Sbjct: 174 LDYIYENKTSALMEASMMVGAILAGAENTKIRQVEKAAGCVGLAFQIEDDILDVTSTQEE 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|254458755|ref|ZP_05072179.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales
           bacterium GD 1]
 gi|207084521|gb|EDZ61809.1| geranylgeranyl pyrophosphate synthetase [Campylobacterales
           bacterium GD 1]
          Length = 282

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 6/216 (2%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAA 78
            +  LL+     ++ H     +  +  + GGK+ R  L+    + +N      A     A
Sbjct: 4   FETFLLENLPTSKSIHPTYEKALQQMLIAGGKRFRPALLLGVVAAYNSLMLDGARHAAYA 63

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H YSLIHDDLP+MD+  +RRG+PT+H+ YDEVTAI+ G+ L TY+FE++S+     
Sbjct: 64  VELLHTYSLIHDDLPAMDDSPLRRGEPTLHVLYDEVTAILVGDALNTYSFEVLSNA--PF 121

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196
            D  R +L+  L  N GL GM+ GQ +D   E   ++   + ++   KT  L+  + + G
Sbjct: 122 SDYTRVKLIQELAKNGGLNGMVLGQAIDCYFENKPLNVADIKILHTNKTAKLIAASLKMG 181

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AI+    +   ++L  FG  LG++FQ+ DD+LD  +
Sbjct: 182 AIIVGQ-EELGDKLYAFGIKLGLLFQIQDDILDVTQ 216


>gi|77919579|ref|YP_357394.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380]
 gi|77545662|gb|ABA89224.1| octaprenyl diphosphate synthase [Pelobacter carbinolicus DSM 2380]
          Length = 322

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 15/225 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L+E+ + I++     L      ++   +  L S       GGK+IR  L+  CA L   N
Sbjct: 8   LKEDLQHIESCFRQYLTSDVPLIRQMSDYILAS-------GGKRIRPVLLLLCARLSGYN 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + + IE IH  +L+HDD+  +D   +RRG+   ++ +    A++ G+ L    F
Sbjct: 61  GEHRYPLASVIEFIHTATLLHDDV--VDGATLRRGQVAANVTWGNDIAVLVGDYLFARCF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++         + R   +L+ T ++  QG +  Q+++  D  +DE +   + + KT AL
Sbjct: 119 EMMVD-----FCDRRIMQVLANTTSLMAQGEVV-QLINSGDLSLDEERYLSVVRSKTAAL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               C   AI+   S  ++E L  FG +LG+ FQL DD LD   D
Sbjct: 173 FSATCRCAAILGQLSAEKEEDLAGFGMHLGVAFQLVDDALDYVAD 217


>gi|84500217|ref|ZP_00998483.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
 gi|84392151|gb|EAQ04419.1| decaprenyl diphosphate synthase [Oceanicola batsensis HTCC2597]
          Length = 331

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 16/231 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             + + L ++   ++ ++ +        M ++H  R+     + +  GGK+IR  L    
Sbjct: 10  EAIAALLADDLGAVNALIRE-------RMASRHAPRIPEVTAHLVEAGGKRIRPMLTLAA 62

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+
Sbjct: 63  ARLCGYDGPYHIHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNKSSVLVGD 120

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   AF+++  P      N+R   +LS       +G +  Q+   QD    E     + 
Sbjct: 121 YLFARAFQLMVEPG-----NLRVLSILSDAAATIAEGEVL-QLSAAQDLKTTEETYLQVI 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KT AL   A E+G  +A AS  +   L  +G+ LGI FQ+ADDLLD   
Sbjct: 175 RGKTAALFSAATEAGGEIAGASPAQVRALFDYGDALGIAFQMADDLLDWTG 225


>gi|319795463|ref|YP_004157103.1| polyprenyl synthetase [Variovorax paradoxus EPS]
 gi|315597926|gb|ADU38992.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
          Length = 330

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 15/219 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
            +D ++   L  T   + +Q +  ++SA      GGK++R  L+   +            
Sbjct: 24  EVDRVIARRL-DTGVPLVSQVSQYIISA------GGKRLRPALLLLMSGALGYTGEQRFN 76

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + AF+++   
Sbjct: 77  LAAVVEFIHTATLLHDDV--VDESTLRRGRATANESFGNPASVLVGDFLYSRAFQMMLDA 134

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                +NIR   +L+   N+  +G +  Q++++ D  +DET    + + KT  L   +  
Sbjct: 135 -----NNIRVMEILAEATNVIAEGEVL-QLMNMHDASLDETAYLRVIRSKTAKLFEASTR 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A++A  +   +E    +G+ LG  FQ+ DD+LD   D
Sbjct: 189 LAAVLAGVTPEVEEACATYGQALGTAFQVIDDVLDYAGD 227


>gi|254462754|ref|ZP_05076170.1| geranylgeranyl pyrophosphate synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206679343|gb|EDZ43830.1| geranylgeranyl pyrophosphate synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 333

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 14/233 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             + + L ++   ++ ++   +    +    +    L+ A      GGK++R  L    A
Sbjct: 12  DAMAAYLADDLNAVNVLIQQRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  HLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++    +     +R   +L+       +G +  Q+   QD    E     + +
Sbjct: 124 LFSRSFQLMVETGS-----MRVLDILANASATIAEGEVL-QLTASQDLSTTEAIYLQVVR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT AL   A E G ++A A +   + L  +G+ LGI FQ+ DDLLD   D  
Sbjct: 178 GKTAALFSAATEVGGVIAGADEAHVKALFDYGDALGIAFQIVDDLLDMSGDAG 230


>gi|187931182|ref|YP_001891166.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
           [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187712091|gb|ACD30388.1| geranyl diphosphate synthase/farnesyl diphosphate synthase
           [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 293

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 10/229 (4%)

Query: 17  DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           + I+ D     +         +  LLSA+ Y+   GGK+IR+  V        ++     
Sbjct: 4   ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  A+E IH YSLIHDDLP+MDN  +RRGKPT HI+++E TAI+AG+ L   AFEI+  
Sbjct: 64  KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
                 D ++ ++        G  GM+GGQ LDI+ E   +   ++ ++   KT  +   
Sbjct: 124 INYSDIDKLK-KINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHTNKTAKMFRV 182

Query: 192 ACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
                 I++ + +   ++ L    + +G+ FQ+ DD+LD  +   +L K
Sbjct: 183 CIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVTKTTNELGK 231


>gi|149378271|ref|ZP_01895982.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893]
 gi|149357436|gb|EDM45947.1| Trans-hexaprenyltranstransferase [Marinobacter algicola DG893]
          Length = 322

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 13  SKRI-DTILDDLLLQTASHMQTQHND-RLLSAI-RYAL-LGGKKIRSFLVTECASLFNVN 68
           ++RI DT+ DD        ++   +D  L+  I +Y +  GGK++R  LV   +     N
Sbjct: 3   AQRIYDTVADDFSRVNDLIIKRLSSDVPLVEKIAQYIIESGGKRLRPLLVLLSSRALGYN 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L++ A IE +H  +L+HDD+  +D   +RRG+ T + ++    +++ G+ L   AF
Sbjct: 63  KDEHLKLAAVIEFLHTATLLHDDV--VDTSDMRRGRSTANARWGNAPSVLVGDFLYARAF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++   +     N++   +LS    +  +G +  Q++++++  + E +   +   KT  L
Sbjct: 121 EMMVELQ-----NLKIMDVLSHATAVIAEGEVL-QLMNVKNPDVSEDKYMEVIHNKTAML 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              A  +GA++A A+ ++++ L  +G++LG+ FQL DD+LD   D  
Sbjct: 175 FEAASHTGALLAGANGSQEQALSAYGKHLGLAFQLVDDVLDYRGDAE 221


>gi|160900919|ref|YP_001566501.1| polyprenyl synthetase [Delftia acidovorans SPH-1]
 gi|160366503|gb|ABX38116.1| Polyprenyl synthetase [Delftia acidovorans SPH-1]
          Length = 359

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 112/227 (49%), Gaps = 15/227 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + ++ + +D ++   L  T   +  Q +  +++A      GGK++R  L+    +   
Sbjct: 45  ALITDDMREVDHVIAQRLTTTVP-LIAQISQYIIAA------GGKRLRPALLLMVCNALG 97

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   + A +E IH  +L+HDD+  +D   +RRG+PT +  +    +++ G+ L + 
Sbjct: 98  YEGRDRHVLAAVVELIHTATLLHDDV--VDESTLRRGRPTANETFGNPASVLVGDFLHSR 155

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F+++    +     +R   +LS   N+  +G +  Q+++  D  +DE     + + KT 
Sbjct: 156 SFQMMVEVGS-----MRVLKILSDATNVIAEGEV-QQLINTHDASLDEAGYLHVIRSKTA 209

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   + + GA++A A +  ++    +G+ LG  FQ+ DD+LD   D
Sbjct: 210 QLFEASAQLGAVLADAPREIEQACAIYGQALGTAFQIIDDVLDYTGD 256


>gi|255321733|ref|ZP_05362888.1| geranyltranstransferase [Campylobacter showae RM3277]
 gi|255301213|gb|EET80475.1| geranyltranstransferase [Campylobacter showae RM3277]
          Length = 388

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 8/222 (3%)

Query: 17  DTILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH-LTA 72
           D +L +      +H+      +     A+ Y L  GGK  R+ LV    +         A
Sbjct: 107 DALLAEFKAFLNAHLPSSPSFHPCFDEALSYTLKSGGKHFRAMLVAGVVAAVRPERKEAA 166

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             V  A E +H YSLIHDDLP+MD+  +RRG+P++H+++DEVTAI+AG+ L T+AF  I+
Sbjct: 167 FHVALAFETMHSYSLIHDDLPAMDDSDLRRGQPSLHVKFDEVTAILAGDALNTHAFYQIA 226

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
             K  L  ++R + +  L+ N G+ GM  GQ +D   E   +   ++  +   KT  L+ 
Sbjct: 227 --KAPLDADVRIKCVEILSRNAGIYGMALGQAVDCYFENQKLGLEELKFLHIHKTARLIA 284

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + ++G ++A   + E  R+   G +LG+ FQ+ADD++D  +
Sbjct: 285 ASLQAGCVVAGLDEAEAARIYDIGLDLGLAFQIADDIIDATQ 326


>gi|85703102|ref|ZP_01034206.1| farnesyl diphosphate synthase [Roseovarius sp. 217]
 gi|85672030|gb|EAQ26887.1| farnesyl diphosphate synthase [Roseovarius sp. 217]
          Length = 287

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 88/233 (37%), Positives = 131/233 (56%), Gaps = 15/233 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + ++L   ++ I T L  +L    +         +   +RYA  GGK+IR FL+ E A L
Sbjct: 1   MQARLAAEAEVIQTHLTRVLAPFGT-------GPVAEGMRYATQGGKRIRGFLLMESARL 53

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V   +AL    AIE +H YSL+HDDLP+MDN  +RRG+PTVH+++DE TAI+ G+ L 
Sbjct: 54  HAVPETSALWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHVKWDEATAILVGDALQ 113

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           + AFE+++ P       +R+ L L+L    G QGM+ GQ LDI  E     +   ++  +
Sbjct: 114 SLAFELVAHPDCG-PAAVRADLTLTLARAAGGQGMVLGQALDIAAETATTPLSLDEITTL 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           Q  KTGAL+ ++  +GA MA A       L  +   LG+ FQ+ DD++D   D
Sbjct: 173 QAGKTGALILWSATAGARMAMADSA---PLSTYARALGLAFQIQDDVIDVTGD 222


>gi|255264686|ref|ZP_05344028.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62]
 gi|255107021|gb|EET49695.1| octaprenyl-diphosphate synthase [Thalassiobium sp. R2A62]
          Length = 332

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 16/229 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L  + + ++ ++       A+ M ++H  R+     + +  GGK++R  L    A 
Sbjct: 14  LNAALTTDLEAVNEVI-------AARMASEHAPRIPEVTAHLVGAGGKRLRPMLTLAAAQ 66

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +    +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 67  LCGYDGDNHIKLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVLVGDYL 124

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +F+++    +     +R   +L+       +G +  QM   QD    E     I + 
Sbjct: 125 FARSFQLMVKTGS-----LRVLDILANAAATIAEGEVL-QMTAAQDLGTTEDTYLKIVRG 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT AL   A + G +++ A +   + L  +G+ LGI FQ+ DDLLD   
Sbjct: 179 KTAALFSAATQVGGVISDADETIVKALYDYGDALGIAFQIVDDLLDYGG 227


>gi|163738897|ref|ZP_02146310.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
 gi|161387702|gb|EDQ12058.1| decaprenyl diphosphate synthase [Phaeobacter gallaeciensis BS107]
          Length = 332

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 16/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + L +    ++T++        + M ++H  R+     + +  GGK++R  L    A 
Sbjct: 13  LAATLSDEMAAVNTLI-------QTRMASKHAPRIPEVTAHLVEAGGKRLRPMLTLAAAR 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +    +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L
Sbjct: 66  LCGYSGDNHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +F+++    +     +R   +L+       +G +  QM    D   DE     + + 
Sbjct: 124 FARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QMTAASDLATDEGIYLQVVRG 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT AL   A ++G ++A+A + + + L  +G+ LGI FQ+ADDLLD + D  
Sbjct: 178 KTAALFSAATQAGGVVANAPETQIDALFAYGDALGIAFQIADDLLDYQGDSA 229


>gi|77464324|ref|YP_353828.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase
           [Rhodobacter sphaeroides 2.4.1]
 gi|57115620|gb|AAW33555.1| decaprenyl diphosphate synthase [Rhodobacter sphaeroides]
 gi|77388742|gb|ABA79927.1| Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
           [Rhodobacter sphaeroides 2.4.1]
          Length = 333

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + L E+   ++ ++ + +    +    +    L+ A      GGK++R  L    A L
Sbjct: 14  LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + + A +E IH  +L+HDD+  +D  + RRGKPT ++ +D  ++++ G+ L 
Sbjct: 68  CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +F+++    +     +R   +L+       +G +  Q+   QD    E     + + K
Sbjct: 126 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL   A E G ++A   + + E L  +G+ LGI FQ+ DDLLD   
Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227


>gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
           23834]
 gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
           23834]
          Length = 295

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 5/229 (2%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNH 69
           +N ++      +L+L+     +     RL  A+RYA+LGG K++R  LV   A L     
Sbjct: 5   DNWQQRARAQAELVLERVLPAENSLPQRLHQAMRYAVLGGGKRLRPLLVLAAAELGQSEA 64

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A    AA+E +H YSL+HDD+P+MDN  +RRGKPT H+QYDE TA++ G+ L T AF+
Sbjct: 65  AAAEAALAAVELVHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVGDALQTLAFD 124

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGA 187
           ++S P   L    + Q++ +L    G  GM GGQ +D+Q   + I + ++  + ++KTGA
Sbjct: 125 VLSRP-NGLPAPRQLQMVHTLARASGSLGMAGGQAIDLQSVGQRIGQAELETMHRLKTGA 183

Query: 188 LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+  A   GA+           RL  +   LG+ FQ+ DD+LDCE D  
Sbjct: 184 LIRAAVALGALSCPDLDDAALARLDDYAAKLGLAFQVIDDVLDCEADTA 232


>gi|311110938|ref|ZP_07712335.1| farnesyltranstransferase [Lactobacillus gasseri MV-22]
 gi|311066092|gb|EFQ46432.1| farnesyltranstransferase [Lactobacillus gasseri MV-22]
          Length = 288

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 24/246 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L    ++ + +ID  L+D L           N      + Y+++ GGK++R  L  
Sbjct: 1   MN--LKDFQKKYTPQIDKFLEDHLASEVD------NPIFSKIMSYSVMAGGKRLRPLLFL 52

Query: 60  ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 N     + LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+
Sbjct: 53  ATLETLNYKISESELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAIL 112

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-- 176
           AG+ LL    + I+           + L + ++  +G  GM GGQ LDI     D  +  
Sbjct: 113 AGDALLPLGIQWITEGSNS------AALAIIISQAVGPNGMGGGQYLDIDSTNNDLVKEN 166

Query: 177 ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--- 230
              +  ++ +KTG L+  + +  A+ A AS +E +RL  F +  G  +Q+ DDL+D    
Sbjct: 167 AKVIDQMEWLKTGCLIEASVKMAAVYAGASTDEVDRLDNFSKQFGRSYQIYDDLVDVVET 226

Query: 231 EEDLPK 236
           E++  K
Sbjct: 227 EQEAGK 232


>gi|110597592|ref|ZP_01385877.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
 gi|110340712|gb|EAT59189.1| Geranyltranstransferase [Chlorobium ferrooxidans DSM 13031]
          Length = 366

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 16/241 (6%)

Query: 1   MNGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
           MN  +  +L E   R+  T ++D L    +  + Q    L    RY L G GK+IR FL 
Sbjct: 35  MNIPVTQELVEKKYRLYHTKINDAL---GTCFEKQSPVTLYEPARYILEGKGKRIRPFLT 91

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              +   + +   AL V  A+E +H ++L+HDD+  MD   +R G+PTVH++++   AI+
Sbjct: 92  LLASEAVSGSSENALNVALAVEVLHNFTLMHDDI--MDQADLRHGRPTVHLEWNVNAAIL 149

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET 175
           +G+ ++ YA+E+    K+           L    N     +  GQ LD++ E        
Sbjct: 150 SGDMMIAYAYELALQAKSSRHAE------LVHILNDANITICEGQALDMELEEKKDATIA 203

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
               +   KTG L+  A E+G +  +A+  +   L  FGE +G  FQ+ DD LD   D  
Sbjct: 204 DYLDMIAKKTGRLISAALEAGGVAGNATDEQLRSLVLFGEKIGRAFQIQDDYLDIMADDG 263

Query: 236 K 236
           K
Sbjct: 264 K 264


>gi|331701507|ref|YP_004398466.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929]
 gi|329128850|gb|AEB73403.1| Farnesyltranstransferase [Lactobacillus buchneri NRRL B-30929]
          Length = 297

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 80/243 (32%), Positives = 127/243 (52%), Gaps = 15/243 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L    +    +I+ IL++ +              L +A+ Y++  GGK++R  L  
Sbjct: 1   MATNLTDFERLWVPKINQILENDIK------PDTDQTTLEAAMIYSVNAGGKRLRPLLTL 54

Query: 60  EC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              ASL +    T L+   A+E +H YSLIHDDLP+MDN  +RRGKPT H+++    A +
Sbjct: 55  AVLASLGDPIDQTVLKTSCALELMHSYSLIHDDLPAMDNDDLRRGKPTNHVKFGAGMATL 114

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           AG+GL   AF+ +      L    +++L L+L    G  GM+ GQ  DI+ E   +  + 
Sbjct: 115 AGDGLQPLAFQWLVD--NDLDSQTQAELTLALAKAAGPHGMVSGQADDIEFEGTRLSLSG 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EED 233
           +  + + KTGAL+ +A E+G IM      +++ L  F E  G  +Q+ DD+LD    E +
Sbjct: 173 LQKLDRNKTGALIRYAVEAGLIMGRVIPEKRKSLLTFAEKFGEAYQIYDDILDVVGTEAE 232

Query: 234 LPK 236
           + K
Sbjct: 233 IGK 235


>gi|117921341|ref|YP_870533.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3]
 gi|117613673|gb|ABK49127.1| farnesyl-diphosphate synthase [Shewanella sp. ANA-3]
          Length = 293

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 137/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L + ++E   R+    DD L Q  S ++     +L +A+ + ALLGGK+IR FLV     
Sbjct: 2   LVNAIKEYQLRV----DDQLKQRFSTLE-DTAPQLKAAMTHGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V         AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVPLEKLDASAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++     +       ++ +L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A ++E + +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234


>gi|254282519|ref|ZP_04957487.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
 gi|219678722|gb|EED35071.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
          Length = 279

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 86/217 (39%), Positives = 123/217 (56%), Gaps = 9/217 (4%)

Query: 28  ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIECIHC 84
             H     + +L +A  Y L   GK++R+ LV E A++            V  AIE +H 
Sbjct: 5   EPHSIPCPDPQLAAAAEYVLANPGKQLRAKLVRETAAMLGSADPNCGVETVATAIELLHS 64

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSL+HDDLP+MDN  +RRG+PTVH  +DE TAI+ G+G    AFEII+   + L    R 
Sbjct: 65  YSLVHDDLPAMDNDDLRRGRPTVHRAFDEATAILVGDGFQARAFEIIAR-DSSLSAEQRV 123

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           +L   L+  +G +GM+GGQ LD+  E       ++  + ++KTGAL+  A   GAI+A A
Sbjct: 124 ELFALLSQAVGFEGMVGGQALDMAAEHQQCGIAELTRLHRLKTGALIQAAVVGGAIVAGA 183

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           ++   +RL  F  NLG+ FQ+ DD+LD      DL K
Sbjct: 184 NRETLDRLATFAMNLGLAFQVIDDVLDVTACSDDLGK 220


>gi|260596789|ref|YP_003209360.1| geranyltranstransferase [Cronobacter turicensis z3032]
 gi|260215966|emb|CBA28595.1| Geranyltranstransferase [Cronobacter turicensis z3032]
          Length = 299

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ  ++R ++ L   +              L+ A+ Y  LLGGK++R FLV    
Sbjct: 2   DFSQQLQSQAERANSALQHFIGAL-----PFQKSPLVEAMLYGTLLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F VN        AAIECIH YSL+HDDLP+MD+  +RRG+PT HI++ E +AI+AG+ 
Sbjct: 57  EMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHIRFGEASAILAGDA 116

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S    + +    R  ++  L    G+ GM GGQ LD++ E   +D   +  
Sbjct: 117 LQTLAFSILSDAPMENVALRDRLAMVSELAKASGVAGMCGGQALDLEAEGQQVDLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A     +    L  + E++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRMGALCAGDKGRDALVYLDSYAESIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|83952381|ref|ZP_00961112.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
 gi|83836054|gb|EAP75352.1| decaprenyl diphosphate synthase [Roseovarius nubinhibens ISM]
          Length = 333

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 9/225 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
           +++    ++ +     + M ++H  R+     + +  GGK++R  L    A++       
Sbjct: 15  ARQFAPKMEAVNALIRARMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAAAICGYEGDH 74

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L + +F+++
Sbjct: 75  DERLAATVEFIHTATLLHDDV--VDESGQRRGRPTANLLWDNKSSVLVGDYLFSRSFQLM 132

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
               +     +R   +L+       +G +  Q+   +D    E     + + KT AL   
Sbjct: 133 VETGS-----LRVLDILANASATIAEGEVL-QLTASRDIATTEATYLQVVRGKTAALFSA 186

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A E G ++A AS      L  +G+ LGI FQ+ADDLLD + D  K
Sbjct: 187 ATEVGGVIAGASDEVTGALYDYGDALGIAFQIADDLLDFQGDSAK 231


>gi|78042835|ref|YP_360049.1| heptaprenyl diphosphate synthase component II [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994950|gb|ABB13849.1| heptaprenyl diphosphate synthase component II [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 326

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 15/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   ++E+ ++I+    +L+ + +   +  H+     A+     GGK++R       A L
Sbjct: 11  LFELVKEDLRKIEQ---ELIKEVSERNEFLHDP----AMHLLKAGGKRLRPAFALLAAKL 63

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            + +      +  A+E IH  +L+HDD+  +DN  +RRG PTV   +    +I  G+ + 
Sbjct: 64  GDYDFEKVKPLAVALELIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIF 121

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +  +I S K      + +++ + +T           Q+   ++         +  K K
Sbjct: 122 AKSLLLIDSCKNNYVAKVLAEVSVKMTTGEI------QQLNGAKNISTSIKDYLIKIKRK 175

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           T  L+  +CE G +MA+ S      L+ +G  +G+ FQ+ DD+LD   D  
Sbjct: 176 TALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEK 226


>gi|152998234|ref|YP_001343069.1| polyprenyl synthetase [Marinomonas sp. MWYL1]
 gi|150839158|gb|ABR73134.1| Polyprenyl synthetase [Marinomonas sp. MWYL1]
          Length = 326

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 19/233 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECA----SLFN 66
           +I  ++ +   Q   ++ +Q   +  L+  I Y ++  GGK++R  LV   A     L  
Sbjct: 5   QIHDVVANEFGQVNDYIVSQLSSDIPLIEQIGYYIISNGGKRLRPLLVLLAAKASAELDK 64

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+++   IE IH  +L+HDD+  +D   +RRGK T + ++    +++ G+ L + 
Sbjct: 65  PKLDQAIQMATIIEFIHTSTLLHDDV--VDESDMRRGKKTANEEWGNAPSVLVGDFLYSR 122

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+I+    +     ++   +L+ T NI  +G +  Q+++  D    E     + + KT 
Sbjct: 123 AFQIMVDVGS-----MQCMSVLAKTTNIIAEGEV-QQLINCGDPDTTEESYLKVIQYKTA 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L   A   GA++A AS+  +E LR FG  +G  FQL DD++D     E++ K
Sbjct: 177 KLFEGAALCGAVIAGASKEHQEALRQFGMYVGTAFQLIDDVMDYTSTAEEMGK 229


>gi|291465068|gb|ADE06004.1| polyprenyl synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 333

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + + L E+   ++ ++ + +    +    +    L+ A      GGK++R  L    A L
Sbjct: 14  IVAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + + A +E IH  +L+HDD+  +D  + RRGKPT ++ +D  ++++ G+ L 
Sbjct: 68  CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +F+++    +     +R   +L+       +G +  Q+   QD    E     + + K
Sbjct: 126 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL   A E G ++A   + + E L  +G+ LGI FQ+ DDLLD   
Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227


>gi|293602311|ref|ZP_06684757.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC
           43553]
 gi|292819073|gb|EFF78108.1| octylprenyl diphosphate synthase [Achromobacter piechaudii ATCC
           43553]
          Length = 321

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 16/236 (6%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   L + + ++ K +D ++ + L      ++T  +  + +       GGK++R  +V 
Sbjct: 1   MNLPALIAPIADDMKAVDAVIRERLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ 
Sbjct: 54  MVARALGYEGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + +FE++        D++R   +LS    +  +G +  Q+L++ D  + + +   
Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMSILSEATTVIAEGEVL-QLLNVHDPDVSQDRYLQ 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + + KT  L   A + GA++A A+  ++     +G ++G  FQL DD+LD   D  
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAA 221


>gi|227823787|ref|YP_002827760.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii
           NGR234]
 gi|227342789|gb|ACP27007.1| geranylgeranyl pyrophosphate synthetase [Sinorhizobium fredii
           NGR234]
          Length = 360

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 113/234 (48%), Positives = 161/234 (68%), Gaps = 3/234 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
            P +L+  +  ++++L +LL  +A   +     +LL A+R+  L GGK++R FLV E  +
Sbjct: 64  FPERLKAAALAVESLLSNLLGPSAQADEIARPAQLLDAMRHGVLNGGKRLRPFLVAESTA 123

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 124 LLGGSADAALRIGAALECVHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSL 183

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
           LT+AF+I+++P+T L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q
Sbjct: 184 LTFAFDIVAAPETPLSDGQKTALVLALARAAGLGGMAGGQALDLAAEKTAPDEAAIVTLQ 243

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            MKTGAL+ FACE+GAI+A A   ++ RLR FGE +G+ FQLADDLLD   D  
Sbjct: 244 AMKTGALIRFACEAGAIIADAGLEDRRRLRAFGEKIGLAFQLADDLLDLTADAE 297


>gi|241889564|ref|ZP_04776862.1| geranyltranstransferase [Gemella haemolysans ATCC 10379]
 gi|241863186|gb|EER67570.1| geranyltranstransferase [Gemella haemolysans ATCC 10379]
          Length = 286

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 121/239 (50%), Gaps = 13/239 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           MN      ++ N  +++    D + +       +  D L  +I Y+L+  GKKIR     
Sbjct: 1   MN-NFKLFIETNKDKLNAFAKDYVEKL------EMPDILKESITYSLVNDGKKIRPLSFL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                + + +     +  AIE +H YSL+HDDLP MDN   R GK T H  Y +  A++ 
Sbjct: 54  YLLKFYGIEYSKYFDIALAIELVHTYSLVHDDLPEMDNDDYRWGKYTNHKVYGQDVAVLT 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ +LT AFE++S     +K +++ +L+    +  G  GM+ GQ+ D   ++  +D   +
Sbjct: 114 GDAMLTLAFEVLSDA--DVKPDLKVRLIKQFANYSGAMGMIAGQIYDVKQKNYDVDADYL 171

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +  +KTG L+    +   ++A+    + + ++ FG+ LGI +Q+ DD+LD   D  K
Sbjct: 172 RKMHSLKTGRLIELPLDFACLVAN-KLEDYDDVKEFGQQLGIAYQIKDDILDYYGDFEK 229


>gi|156935030|ref|YP_001438946.1| geranyltranstransferase [Cronobacter sakazakii ATCC BAA-894]
 gi|156533284|gb|ABU78110.1| hypothetical protein ESA_02881 [Cronobacter sakazakii ATCC BAA-894]
          Length = 299

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ  ++R +  L   + +            L+ A+ Y  LLGGK++R FLV    
Sbjct: 2   DFSQQLQAQAERANRALQHFIGEL-----PFQKSPLVEAMLYGTLLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F VN        AAIECIH YSL+HDDLP+MD+  +RRG+PT HI++ E +AI+AG+ 
Sbjct: 57  EMFGVNPTALDAPAAAIECIHAYSLMHDDLPAMDDDDLRRGQPTCHIRFGEASAILAGDA 116

Query: 123 LLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I+S    + +    R  ++  L    G+ GM GGQ LD++ E   +D   +  
Sbjct: 117 LQTLAFSILSDAPMENVALRDRLAMVSELAKASGVAGMCGGQALDLEAEGQQVDLDALER 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A   GA+ A     +    L  + +++G+ FQ+ DD+LD   D   L 
Sbjct: 177 IHRHKTGALIRAAVRMGALCAGDKGRDALVYLDSYADSIGLAFQVQDDILDVVGDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|253991517|ref|YP_003042873.1| octaprenyl diphosphate synthase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638395|emb|CAR67017.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase (opp synthetase) [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782967|emb|CAQ86132.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase (opp synthetase) [Photorhabdus asymbiotica]
          Length = 323

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 21  DDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGA 77
           DD+     + +   ++D  L++ + Y ++  GGK+IR  +    A          + V A
Sbjct: 12  DDMAAVNEAILSQLNSDVALINQLGYYIISGGGKRIRPIIAILAARALGYQSDKHITVAA 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++++  + 
Sbjct: 72  LIEFIHTATLLHDDV--VDESDMRRGKATANATFGNAASVLVGDFIYTRSFQMMTTLNS- 128

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               +R   ++S   N+  +G +  Q+++  D  I E     +   KT  L   A  S A
Sbjct: 129 ----MRVLKLMSEATNVIAEGEVL-QLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSSA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           I+++A+  ++  L+ +G  LG  FQL DDLLD + D   L K
Sbjct: 184 IISNATPEQETALQDYGRYLGTAFQLIDDLLDYDADSNTLGK 225


>gi|90420298|ref|ZP_01228206.1| putative geranyltranstransferase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335632|gb|EAS49382.1| putative geranyltranstransferase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 300

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 111/234 (47%), Positives = 148/234 (63%), Gaps = 5/234 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
             ++L E +   +  L D L      +      RLL+A+R+ AL GGK++R FLV E A 
Sbjct: 6   FQARLSEAADLTEARLADCLAGAHGSVAGA-PARLLAAMRHGALGGGKRLRPFLVIESAR 64

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF  +   A+    A+ECIHCYSL+HDDLPSMD+  +RRGKPTVH  YDE TAI+AG+GL
Sbjct: 65  LFGADLQAAIGAATALECIHCYSLVHDDLPSMDDDDLRRGKPTVHRAYDEATAILAGDGL 124

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT AF +++  +  L    R  L+  L  + G  GM+GGQ+LD+  E   + E ++  +Q
Sbjct: 125 LTLAFGLVAG-EEGLSPKARVALVALLARDAGAAGMVGGQVLDLAAENAVLSEDEIARMQ 183

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            MKTGAL+ FACE+GAI+A A   E+ RLR FGE +G+ FQLADDLLD   D  
Sbjct: 184 AMKTGALIAFACEAGAIVADAGAAERARLRRFGEIVGLAFQLADDLLDETADAA 237


>gi|330998275|ref|ZP_08322100.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841]
 gi|329568664|gb|EGG50465.1| polyprenyl synthetase [Paraprevotella xylaniphila YIT 11841]
          Length = 327

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 107/227 (47%), Gaps = 14/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +  + A     +    L   IRY L +GGK+IR  L+    +L+           
Sbjct: 6   EVLDYINGEIAGMSFERQPAELYEPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEEIGFQA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H Y+L+HDDL  MD   +RRG  TVH ++D+  AI++G+ +L  A+  +     
Sbjct: 66  VAIEIYHNYTLLHDDL--MDRADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQ--- 120

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
                    +M   T      G   GQ  D++ E    + E +   + ++KT  L+  A 
Sbjct: 121 GCPAEHLGDVMSLFTETALEIGE--GQQYDMEFEARADVSEEEYIEMIRLKTSVLLACAL 178

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GA +  A + + E L  FGENLG+ FQL DD LD   D     KK
Sbjct: 179 KIGAWLGGAPRQDAELLYRFGENLGLAFQLQDDYLDVYGDPAVFGKK 225


>gi|329961528|ref|ZP_08299609.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
 gi|328531740|gb|EGF58569.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
          Length = 324

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 16/222 (7%)

Query: 22  DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           +LL +  SH+     T+    L   + Y L +GGK+IR  L+    +L+  +        
Sbjct: 6   ELLEKINSHIADLKFTRTPQGLYDPVSYVLSMGGKRIRPVLMLMAYNLYKEDLARIYGPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A+  ++    
Sbjct: 66  TGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLVLAYRFMAQCPV 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFAC 193
                +     L+         +  GQ +D++ E    + E +   + ++KTG L+  + 
Sbjct: 124 DCLKEVMELFSLT------ALEICEGQQMDMEFELRKDVREEEYLEMIRLKTGVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + GA++  AS  +   L  FG NLG+ FQL DDLLD   D+ 
Sbjct: 178 KIGALLGGASAEDAGHLYDFGMNLGVAFQLKDDLLDVYGDVA 219


>gi|319903089|ref|YP_004162817.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
 gi|319418120|gb|ADV45231.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
          Length = 324

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 19/229 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  K+I++ + DL         T+    L + + Y L +GGK+IR  L+    +L+  + 
Sbjct: 6   EILKKINSHIADLKF-------TRTPQGLYAPVSYVLSMGGKRIRPVLMLMSYNLYKEDI 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           + A      IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A++
Sbjct: 59  VRAYGPAIGIEVYHNYTLLHDDL--MDCADRRRGKKTVHKVWNDNTAILSGDAMLVLAYQ 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTG 186
            ++         +     L+         +  GQ +D++ E    + E +   + ++KT 
Sbjct: 117 YMAQCPAGYLKEVMDLFSLT------ALEICEGQQMDMEFELRKDVKEGEYLEMIRLKTS 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L+  + + GA++  AS  + E L  FG NLGI FQL DDLLD   D  
Sbjct: 171 VLLAASLKIGALLGGASAEDAEHLYNFGMNLGIAFQLKDDLLDVYGDAA 219


>gi|120437409|ref|YP_863095.1| isoprenyl synthetase [Gramella forsetii KT0803]
 gi|117579559|emb|CAL68028.1| isoprenyl synthetase [Gramella forsetii KT0803]
          Length = 324

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 12/222 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I    + ++      ++ +    L   + Y L  GGK++R  LV     +F+ N+  AL 
Sbjct: 4   ISQYREAIIDYLHEKIKVKEPANLYEPMVYILEQGGKRLRPVLVLMATEIFDCNYKKALD 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE  H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++  S 
Sbjct: 64  AALAIEIFHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLINAYQLFESY 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191
           +            LS         +  GQ  DI  E  D         + + KT  L+  
Sbjct: 122 EGDTFKE------LSKLFTKTAIEVCEGQQYDIDFETRDNVSIENYLKMIEYKTAVLVGA 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + GAI+A  S   KE +  +G  LGI FQL DD LD   D
Sbjct: 176 SLQMGAIVAQTSTACKEAIYQYGRLLGIAFQLQDDYLDAFGD 217


>gi|328541834|ref|YP_004301943.1| Geranyltranstransferase protein [polymorphum gilvum SL003B-26A1]
 gi|326411586|gb|ADZ68649.1| Geranyltranstransferase protein [Polymorphum gilvum SL003B-26A1]
          Length = 303

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 3/235 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           +   L + L E + R++ +L D L       +T+   RL+ A+R+A L GGK++R  L+ 
Sbjct: 3   VTERLEAHLAEVAGRMEAVLADALAPAPKDGETERPSRLVEAMRHAALGGGKRLRPVLMV 62

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A LF        R  AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE TAI+A
Sbjct: 63  ETARLFGRADDGVYRAAAALECIHCYSLVHDDLPAMDDDDLRRGRPTVHKAFDEATAILA 122

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ LLT AF++I+         +R +L   L    G+ GM GGQMLD++ E     ET++
Sbjct: 123 GDALLTLAFDLIAEAPVHPDPAVRLRLSQELARAAGVGGMAGGQMLDLEAEHRVRSETEI 182

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +Q MKTGAL+ +AC +GAI+A A   +  R+  FGE +G+ FQLADDLLD E 
Sbjct: 183 RTLQAMKTGALLRYACRAGAILADAGAEDVARMTRFGEVVGLAFQLADDLLDLEA 237


>gi|54295170|ref|YP_127585.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
 gi|53755002|emb|CAH16490.1| hypothetical protein lpl2250 [Legionella pneumophila str. Lens]
          Length = 298

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + + ++R +  L+ LL +           ++ SA+ YAL  GGK+IR  LV     L +V
Sbjct: 6   IDKYTQRHELYLEQLLNEIVIP-----APQIRSALHYALFSGGKRIRPILVYLAGDLIDV 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      + AA+E  HCYSLIHDDLP+MDN  +RRGKP+ H  +DE TAI+ G+G+   A
Sbjct: 61  DQEVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 120

Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183
            E ++      L       +   L +  G+ GM+ GQ LD+ +     + E Q+  I  +
Sbjct: 121 IEVVLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLL 180

Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L+    E   A     S+  K  LR +G+++G++FQ+ DD LD   
Sbjct: 181 KTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230


>gi|194290791|ref|YP_002006698.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424]
 gi|193224626|emb|CAQ70637.1| octaprenyl diphosphate synthase [Cupriavidus taiwanensis LMG 19424]
          Length = 345

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 108/229 (47%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L + +  + + +D ++   L      ++ Q  + ++ A      GGK++R  ++   A 
Sbjct: 28  ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLTAR 80

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L
Sbjct: 81  ALGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 138

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++    +     +R   +LS   N+  +G +  Q+L++ D  +   +   + + 
Sbjct: 139 YSRAFQMMVDAGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPDVTVERYLQVIRY 192

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   A + GA+++ A    +E    +G  +G  FQL DD+LD   
Sbjct: 193 KTAKLFEAAAQLGAVLSGADAQMEEAAAEYGRRIGTAFQLIDDMLDYTA 241


>gi|149928102|ref|ZP_01916349.1| geranyltranstransferase [Limnobacter sp. MED105]
 gi|149823188|gb|EDM82425.1| geranyltranstransferase [Limnobacter sp. MED105]
          Length = 300

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 119/239 (49%), Gaps = 13/239 (5%)

Query: 1   MNGGLP---SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
           MN   P   +   E     + +L D L Q         +  L +A+ YALL GGK++R+ 
Sbjct: 1   MNYAQPIQLNWFDETRAGFEAVLADKLKQFEGP-----SSELNAAMEYALLDGGKRLRAM 55

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           LV                   +IE +H YSL+HDDLPSMDN  +RRGKPT H+++ E  A
Sbjct: 56  LVFAAGYAVETPTSQLNDAACSIEAMHAYSLVHDDLPSMDNDVLRRGKPTCHVKFGEAFA 115

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDE 174
           ++AG+ L T AF+ ++    Q    +R Q + +L    GLQGM  GQ +D     + +D 
Sbjct: 116 LLAGDALQTAAFQWLAES-NQGSVQVRMQQIAALASAAGLQGMAAGQAIDLAHVGKPMDL 174

Query: 175 TQVFMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  +   KTG L+  +   G +  A  S  EK  L  +   LG+ +Q+ DD+LD E 
Sbjct: 175 QSLATMHARKTGDLITASVRMGYVSNATLSAVEKNGLEAYAHCLGLAYQVIDDILDVES 233


>gi|126463166|ref|YP_001044280.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559215|ref|ZP_08413537.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N]
 gi|126104830|gb|ABN77508.1| Trans-hexaprenyltranstransferase [Rhodobacter sphaeroides ATCC
           17029]
 gi|332276927|gb|EGJ22242.1| trans-hexaprenyltranstransferase [Rhodobacter sphaeroides WS8N]
          Length = 333

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + L E+   ++ ++ + +    +    +    L+ A      GGK++R  L    A L
Sbjct: 14  LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + + A +E IH  +L+HDD+  +D  + RRGKPT ++ +D  ++++ G+ L 
Sbjct: 68  CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +F+++    +     +R   +L+       +G +  Q+   QD    E     + + K
Sbjct: 126 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL   A E G ++A   + + E L  +G+ LGI FQ+ DDLLD   
Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVEALHAYGDALGIAFQIVDDLLDYGG 227


>gi|330823512|ref|YP_004386815.1| trans-hexaprenyltranstransferase [Alicycliphilus denitrificans
           K601]
 gi|329308884|gb|AEB83299.1| Trans-hexaprenyltranstransferase [Alicycliphilus denitrificans
           K601]
          Length = 349

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 15/232 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
                + + ++ + +D ++   L Q++  +       ++SA      GGK++R  L+   
Sbjct: 30  TAATLALIADDMREVDKVIAARL-QSSVPLVGSVAQYIISA------GGKRLRPALLLLT 82

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                        + A +E IH  +L+HDD+  +D   +RRG+PT +  +    +++ G+
Sbjct: 83  CGALEYKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANEAFGNPASVLVGD 140

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L T +F+++    +     +R   +L+   N+  +G +  Q+++  D  +DE     + 
Sbjct: 141 FLHTRSFQMMVEAGS-----MRILQVLADATNVIAEGEV-QQLMNTHDASLDEAGYLHVI 194

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KT  L   +    AI+A ++ + ++    +G+ LG  FQ+ DD+LD + D
Sbjct: 195 RSKTAKLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGD 246


>gi|313890735|ref|ZP_07824360.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120836|gb|EFR43950.1| geranyltranstransferase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 289

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 83/203 (40%), Positives = 118/203 (58%), Gaps = 6/203 (2%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLP 93
           ++ L++AIRY+   GGK+IR  L+ E    F+V    +   V AA+E IH  SLIHDDLP
Sbjct: 22  SEHLIAAIRYSAEAGGKRIRPLLLLELLEAFSVTLTDSHYDVAAALEMIHTGSLIHDDLP 81

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MDN   RRG+ T H ++DE TAI+AG+ L   AF +I+   T L  NI+  LM  L+H+
Sbjct: 82  AMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDAFALIAE--TNLSANIKVDLMHCLSHS 139

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +  T +  I + KTG L+ +   + A +A   +     L 
Sbjct: 140 SGTFGMVGGQMLDMKAEGQELALTDLQEIHRHKTGCLLAYPFWAAAKIADVDEEILLDLY 199

Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
             G  +G  FQ+ DD+LD   D 
Sbjct: 200 QAGLKVGHAFQVRDDILDVTADF 222


>gi|161870803|ref|YP_001599976.1| geranyltranstransferase [Neisseria meningitidis 053442]
 gi|161596356|gb|ABX74016.1| geranyltranstransferase [Neisseria meningitidis 053442]
          Length = 298

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 8/237 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L  V H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H+QYDE TA++ G
Sbjct: 59  ASELGGVVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           + L T AF+++S P         +   +L+               L    + + +  +  
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +KTGAL+  A   GA      S  E   L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLGLAFQVIDDVLDCEADTA 235


>gi|269138336|ref|YP_003295036.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202]
 gi|267983996|gb|ACY83825.1| geranylgeranyl pyrophosphate synthase [Edwardsiella tarda EIB202]
 gi|304558368|gb|ADM41032.1| Geranyltranstransferase [Edwardsiella tarda FL6-60]
          Length = 301

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 87/239 (36%), Positives = 127/239 (53%), Gaps = 10/239 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
                +++   +R D  L   L           +  L+ A+RY ALLGGK++R +LV   
Sbjct: 2   ASFEQQMKTCRQRADAALIQALDTL-----PFADGPLVGAMRYGALLGGKRLRPYLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LF  +        AA+ECIH YSL+HDDLP+MD+  +RRG+PT HI++ E  AI+AG+
Sbjct: 57  GGLFGCSPTALDAPAAAVECIHAYSLLHDDLPAMDDDDLRRGQPTCHIKFGEAHAILAGD 116

Query: 122 GLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVF 178
            L T AF I++  P   + D  R Q++  L H  G+ GM GGQ LD++ E   +    + 
Sbjct: 117 ALQTLAFSILADGPMPGVADRDRLQMLSELAHASGVAGMCGGQALDLEAEGRHVALAALE 176

Query: 179 MIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I + KTGAL+  A   GA+    A +     L  +   +G+ FQ+ DD+LD   D  K
Sbjct: 177 QIHRHKTGALIRCAVRMGALAGGDAGRRALPALDRYAAAIGLAFQVQDDILDVVGDSSK 235


>gi|157827248|ref|YP_001496312.1| octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389]
 gi|157802552|gb|ABV79275.1| Octaprenyl-diphosphate synthase [Rickettsia bellii OSU 85-389]
          Length = 327

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 120/220 (54%), Gaps = 11/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I   L D + Q  + + +  + ++ L+  + +Y L  GGK+IR  L    A +F+ N  
Sbjct: 6   KIQQDLKDEVAQLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYNGD 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           + +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L + +F++
Sbjct: 66  SHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           + +  +     I++  +L+    I  +G +   +   +   I+  +   I K KT  L  
Sbjct: 124 MVASGS-----IKAMNVLAKASAIISKGEVVQLVKLNERRLINIEEYQQIVKSKTAELFG 178

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +C  GAI+A+ S +  + +  FG+ LG IFQ+ DDLLD 
Sbjct: 179 ASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDDLLDY 218


>gi|89255952|ref|YP_513314.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314435|ref|YP_763158.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|167009142|ref|ZP_02274073.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|169656540|ref|YP_001428011.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|254367309|ref|ZP_04983335.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           257]
 gi|254368783|ref|ZP_04984796.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954603|ref|ZP_06559224.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295311946|ref|ZP_06802770.1| polyprenyl synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89143783|emb|CAJ78986.1| Geranyltranstransferase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129334|gb|ABI82521.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253125|gb|EBA52219.1| geranyltranstransferase [Francisella tularensis subsp. holarctica
           257]
 gi|157121704|gb|EDO65874.1| hypothetical protein FTAG_00588 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551608|gb|ABU61055.2| polyprenyl synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 293

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 7/221 (3%)

Query: 17  DTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           + I+ D     +         +  LLSA+ Y+   GGK+IR+  V        ++     
Sbjct: 4   ENIIKDFEIFAEKVFDQLNCVSKTLLSAMHYSFFSGGKRIRAQFVYAIGEALAIDKSNCD 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  A+E IH YSLIHDDLP+MDN  +RRGKPT HI+++E TAI+AG+ L   AFEI+  
Sbjct: 64  KIAFAVESIHTYSLIHDDLPAMDNDTLRRGKPTCHIKFNEATAILAGDALQALAFEILQD 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
                 D ++ ++        G  GM+GGQ LDI+ E   +   ++ ++   KT  +   
Sbjct: 124 INYSDIDKLK-KINKLFAQYCGASGMVGGQQLDIEGENKKLKIEELQILHINKTAKMFRA 182

Query: 192 ACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                 I++ + +   ++ L    + +G+ FQ+ DD+LD  
Sbjct: 183 CIVLPYILSQNQNSQIEDLLVRLSDLIGLCFQIKDDILDVT 223


>gi|227328594|ref|ZP_03832618.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 296

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   + N    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|150402965|ref|YP_001330259.1| polyprenyl synthetase [Methanococcus maripaludis C7]
 gi|150033995|gb|ABR66108.1| Polyprenyl synthetase [Methanococcus maripaludis C7]
          Length = 317

 Score =  194 bits (495), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 19/229 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +E   +ID+ L   + +         +  L SA ++ LL GGK++R +L      L   +
Sbjct: 5   REILSKIDSELKKYMEK---------DTNLYSASKHLLLAGGKRVRPYLSIITYLLKKDD 55

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +    ++E IH Y+L+HDD+  MDN   RRG PTVH  Y E  AI+AG+ L   AF
Sbjct: 56  INEIMAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
           E +S+     K +   +++     +     +  GQ  D++ E  F    + F +   KTG
Sbjct: 114 EALSNIGDSKKAHEVLKVL-----SKACVEVCEGQTDDMEFEERFPTLDEYFDMISKKTG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           AL+    E GAIMA  +  E+  L  + + +G+ FQ+ DD+LD   D  
Sbjct: 169 ALIVAPVEIGAIMAECTPEERNALCNYAKRIGMTFQIQDDVLDLIGDQK 217


>gi|89070187|ref|ZP_01157515.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
 gi|89044203|gb|EAR50354.1| decaprenyl diphosphate synthase [Oceanicola granulosus HTCC2516]
          Length = 332

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 13/234 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTAS----HMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
            L + + +  +R+   L D L    +     MQ++H  R+     + +  GGK++R  L 
Sbjct: 2   SLDAAVTKPHERLAEALSDDLAAVNALIRERMQSEHAPRIPEVTAHLVEAGGKRLRPMLT 61

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A L   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++
Sbjct: 62  LAAARLCGYDGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNQSSVL 119

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ L   +F ++         N+    +LS       +G +  Q+   +    DE    
Sbjct: 120 VGDYLFAKSFLLMVDTG-----NLDVLRILSQASATIAEGEVL-QLTASRSLATDEAVYM 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + + KT AL   A E G ++A         L  +G+ LGI FQ+ DDLLD E 
Sbjct: 174 KVIRGKTAALFSAATEVGGVIAGQGPEVCRALFDYGDALGIAFQIVDDLLDYEG 227


>gi|317401225|gb|EFV81869.1| octaprenyl-diphosphate synthase [Achromobacter xylosoxidans C54]
          Length = 321

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 16/236 (6%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   L + + ++ K +D ++ + L      ++T  +  + +       GGK++R  +V 
Sbjct: 1   MNLPALIAPIVDDMKAVDAVIRERLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ 
Sbjct: 54  MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRETANAVFGNAASVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + +FE++        D++R   +LS    +  +G +  Q+L++ D  + + +   
Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMSILSEATTVIAEGEVL-QLLNVHDPDVSQERYLQ 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + + KT  L   A + GA++A A+  ++     +G ++G  FQL DD+LD   D  
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAA 221


>gi|239947339|ref|ZP_04699092.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921615|gb|EER21639.1| octaprenyl-diphosphate synthase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 326

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 65/227 (28%), Positives = 120/227 (52%), Gaps = 15/227 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLF 65
           K+Q++   + T L+DL++          ++ L+  + +Y L  GGK+IR  L    A +F
Sbjct: 6   KIQQDLDEV-TKLNDLIISCLK-----SDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 59

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT +I +   T+I+ G+ L +
Sbjct: 60  DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANIIWGSKTSILVGDFLFS 117

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +F+++ +  +     I++  +L+    I  +G +   +   +   I   +   I K KT
Sbjct: 118 QSFKLMIASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             L   +CE GAI+A    +  + ++ FG+ LG IFQ+ DDLLD   
Sbjct: 173 AELFGASCEVGAIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLDYWG 219


>gi|89901647|ref|YP_524118.1| polyprenyl synthetase [Rhodoferax ferrireducens T118]
 gi|89346384|gb|ABD70587.1| farnesyl-diphosphate synthase [Rhodoferax ferrireducens T118]
          Length = 314

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 11/244 (4%)

Query: 3   GGLPSKLQENSKRIDTILDD-LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
             L +    +   +++ L+  +    A+  +      L++A+RYA+L GGK++R  LV  
Sbjct: 7   FNLSAWSALHLAHVESALERWVRPDAATDAEGGAPVELMAAMRYAVLDGGKRLRPLLVLA 66

Query: 61  CASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
            +   +     A       LR   A+E IH YSL+HDDLP MDN  +RRGK TVH+++ E
Sbjct: 67  ASEAASGERPAAANTPEIALRAACAVELIHAYSLVHDDLPCMDNDVLRRGKATVHVKFGE 126

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ--LMLSLTHNIGLQGMLGGQMLDIQDEF 171
            +A++AG+ L   AFE+++     +    ++    +L+               L      
Sbjct: 127 ASAMLAGDALQAMAFELLTPDDDAIPARQQAALCRLLARAAGSAGMAGGQAIDLASVGVA 186

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + E Q+  + ++KTGAL+  +   GA     S   +  L  +G  +G+ FQ+ DD+LD  
Sbjct: 187 LTERQLRQMHRLKTGALLQASVMMGAACGDVSAQAEAALMSYGAAIGLAFQVVDDMLDVT 246

Query: 232 EDLP 235
            D  
Sbjct: 247 ADSA 250


>gi|67459231|ref|YP_246855.1| octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2]
 gi|67004764|gb|AAY61690.1| Octaprenyl-diphosphate synthase [Rickettsia felis URRWXCal2]
          Length = 327

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/225 (29%), Positives = 120/225 (53%), Gaps = 14/225 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLF 65
           K+Q++ K   T L+DL++          ++ L+  + +Y L  GGK+IR  L    A +F
Sbjct: 6   KIQQDLKDEVTKLNDLIISCLK-----SDEELIETVGKYLLEAGGKRIRPLLTIITAKMF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 61  DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +F+++ +  +     I++  +L+    I  +G +   +   +   I   +   I K KT
Sbjct: 119 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVIQLVKLNERRIITIDEYQQIVKSKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             L   +CE GAI+A    +  + +R FG+ LG IFQ+ DDLLD 
Sbjct: 174 AELFGASCEVGAIIAEQVDHISKDMRDFGKLLGTIFQVIDDLLDY 218


>gi|45357608|ref|NP_987165.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanococcus maripaludis S2]
 gi|45047168|emb|CAF29601.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanococcus maripaludis S2]
          Length = 317

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 70/229 (30%), Positives = 113/229 (49%), Gaps = 19/229 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +E   +ID+ L   + +         + +L  A ++ LL GGK++R +L      L    
Sbjct: 5   REILSKIDSELKKYMEK---------DTKLYGASKHLLLAGGKRVRPYLSILTYLLKKDE 55

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +    ++E IH Y+L+HDD+  MDN   RRG PTVH  Y E  AI+AG+ L   AF
Sbjct: 56  LTEIMAPALSVELIHNYTLVHDDI--MDNDDQRRGIPTVHTVYGEPIAILAGDLLYAKAF 113

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
           E +S+ +   K +   +++     +     +  GQ  D++ E  F    +   +   KTG
Sbjct: 114 EALSNIEDSNKAHEVLKVL-----SKACVEVCEGQTEDMEFEERFPTLDEYLEMISKKTG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           AL+    E GA+MA  +  E+E L  + + +G+ FQ+ DD+LD   D  
Sbjct: 169 ALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQK 217


>gi|110590588|pdb|2H8O|A Chain A, The 1.6a Crystal Structure Of The Geranyltransferase From
           Agrobacterium Tumefaciens
          Length = 335

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 111/235 (47%), Positives = 155/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++L+EN+ + + +L  LL   A   +      LL A+R+  L GGK++R FLV E  
Sbjct: 38  NFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESV 97

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L   +    L VGAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVH ++DE TAI+AG+ 
Sbjct: 98  ALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDS 157

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
           LLT AF+II+S    L    ++ L++SL    G+ GM GGQ LD+  E    DE  +  +
Sbjct: 158 LLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGIITL 217

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD   D  
Sbjct: 218 QAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADAA 272


>gi|294340091|emb|CAZ88459.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Thiomonas sp. 3As]
          Length = 326

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 13/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           +N      L ++  R   +++  +      +      +L  A+ YA  +GGK++R  LV 
Sbjct: 24  LNHSFDHWLHQHQARAQQLIERFVPPEHPLVP-----QLHEAMHYAAAMGGKRVRPLLVW 78

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                   +     R   A+E +H YSL+HDDLP MD+  +RRG+PT H+++ E  A++A
Sbjct: 79  AAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVRFGEALALLA 138

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L   A+E++ +P+  +   ++++L   L    G  GM GGQ LDI      +    +
Sbjct: 139 GDALQALAYEVL-TPEADIAPALQARLCALLARASGADGMAGGQTLDILATGGAVSGDDL 197

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADDLLDCEED 233
             +   KTGAL+  +   GA                L  +G+ +G+ FQ+ DD+LD   D
Sbjct: 198 MHMHSRKTGALLKASVLMGAACGGFDTAHPAQTYTALETYGDAVGLAFQVVDDILDVTAD 257


>gi|52842540|ref|YP_096339.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52629651|gb|AAU28392.1| geranyltranstransferase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 309

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + + ++R +  L+ LL +           ++ SA+ YAL  GGK+IR  LV     L +V
Sbjct: 17  IDKYTQRHELYLEQLLNEIIIP-----APQIRSALHYALFSGGKRIRPILVYLAGDLIDV 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      + AA+E  HCYSLIHDDLP+MDN  +RRGKP+ H  +DE TAI+ G+G+   A
Sbjct: 72  DQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 131

Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183
            E++       L       +   L +  G+ GM+ GQ LD+ +     + E Q+  I  +
Sbjct: 132 IEVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLL 191

Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L+    E   A     S+  K  LR +G+++G++FQ+ DD LD   
Sbjct: 192 KTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 241


>gi|238750110|ref|ZP_04611613.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380]
 gi|238711654|gb|EEQ03869.1| Octaprenyl-diphosphate synthase [Yersinia rohdei ATCC 43380]
          Length = 323

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILVARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A+AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLANASEEQEVALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED---LPK 236
           D   D   L K
Sbjct: 215 DYSSDGVTLGK 225


>gi|293393170|ref|ZP_06637485.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582]
 gi|291424316|gb|EFE97530.1| octaprenyl-diphosphate synthase [Serratia odorifera DSM 4582]
          Length = 381

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 101 GGKRIRPMIAVLAARALQYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 158

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 159 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNVH 212

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI++ A++ +++ L+ +G  LG  FQL DDLL
Sbjct: 213 DPDITEESYMRVIYSKTARLFEAAAQSSAILSGATEAQEQGLQDYGRYLGTAFQLIDDLL 272

Query: 229 DCEED---LPK 236
           D   D   L K
Sbjct: 273 DYSADGVTLGK 283


>gi|226329701|ref|ZP_03805219.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198]
 gi|225202887|gb|EEG85241.1| hypothetical protein PROPEN_03613 [Proteus penneri ATCC 35198]
          Length = 323

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +        +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLTGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSSATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI++ A+  +++  + +G  LG  FQL DDLL
Sbjct: 155 DPDISEDDYMQVIYSKTARLFEAASHASAILSGATPEQEKAFQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED---LPK 236
           D + D   L K
Sbjct: 215 DYDADNNQLGK 225


>gi|149369615|ref|ZP_01889467.1| putative isoprenoid biosynthesis related protein [unidentified
           eubacterium SCB49]
 gi|149357042|gb|EDM45597.1| putative isoprenoid biosynthesis related protein [unidentified
           eubacterium SCB49]
          Length = 324

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
              +       L     Y L LGGK++R  L    A  F      A+    A+E  H +S
Sbjct: 16  EQAIPVNEPIGLYGPAAYILELGGKRLRPVLTLMTAEFFGSTIEKAMNAALAVELFHNFS 75

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++    + +         
Sbjct: 76  LIHDDI--MDDAPLRRGKVTVHEKWDLNTGILSGDAMLILAYQLFEGYEAEKFQQ----- 128

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHAS 203
            L+   +     +  GQ  D+  E  D+    +   +   KT  L+  A + GAI+A AS
Sbjct: 129 -LAKLFSKTALEVCEGQQYDVDFETRDDVTIPEYIKMIDFKTAVLIGAAMKMGAIVAEAS 187

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
              K+ +  FG NLGI FQL DD LD   D
Sbjct: 188 DACKDNIYEFGRNLGIAFQLQDDYLDAFGD 217


>gi|329851866|ref|ZP_08266547.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
           C19]
 gi|328839715|gb|EGF89288.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
           C19]
          Length = 303

 Score =  194 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 93/230 (40%), Positives = 135/230 (58%), Gaps = 6/230 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           L  ++ E +  +  +LD LL +           RL  A+RYA LG GK++R F   E A 
Sbjct: 13  LLQRMAETADLVTVVLDQLLPRGDGP-----ECRLTEAMRYAALGPGKRLRPFFALETAR 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF+ +    LR   A+ECIH YSL+HDDLP MD+  IRRG+ TVH  YDE TA++ G+ L
Sbjct: 68  LFDADENAVLRAACALECIHAYSLVHDDLPCMDDDDIRRGRLTVHRAYDEATAVLVGDAL 127

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AFEI++S  T     +R +L+  L    G QGM GGQM+D+     D   V  +Q++
Sbjct: 128 QSVAFEILASEDTHDDPLVRCELVRMLAQASGAQGMAGGQMIDLIGVHDDLGGVARMQRL 187

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+ +A +   ++A   + E   +  F ++LG+ +Q+ADD+LD E D
Sbjct: 188 KTGALIVYAFQIPLVVADVGEREGMVMTHFAQDLGLAYQIADDVLDIEGD 237


>gi|262277442|ref|ZP_06055235.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114]
 gi|262224545|gb|EEY75004.1| octaprenyl-diphosphate synthase [alpha proteobacterium HIMB114]
          Length = 337

 Score =  194 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 22/240 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
             + S  QE  K++D   D + L+ +SH++      L+  +   L+  GGK++R  L   
Sbjct: 17  EEIKSAYQEQLKKVD---DHIKLKLSSHVE------LVGEMATHLMSTGGKRLRPLLTIC 67

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + +FN      + + A +E IH  +L+HDD+  +D    RRG  T +  +   ++I+AG
Sbjct: 68  SSEIFNYKGNRHINLAACVELIHNATLLHDDV--IDKSESRRGFKTTNAIWGNKSSILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL+  FE++    +Q    I S +   +     +Q     Q+  +      E     I
Sbjct: 126 DYLLSRCFEMMVDDGSQEVLKILSSVSSEIAQGEIMQLQFEKQVDMV------EKNYLDI 179

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
              KT +L   +   G  +   S  EKE L  +G NLGI FQ+ DD+LD         KK
Sbjct: 180 ISAKTASLFGASMRVGGCINDRSNKEKEALESYGRNLGICFQITDDILDYSSKEQVFGKK 239


>gi|296136077|ref|YP_003643319.1| Polyprenyl synthetase [Thiomonas intermedia K12]
 gi|295796199|gb|ADG30989.1| Polyprenyl synthetase [Thiomonas intermedia K12]
          Length = 324

 Score =  194 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 13/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           +N      L ++  R   +++  +      +      +L  A+ YA  +GGK++R  LV 
Sbjct: 22  LNHSFDHWLHQHQARAQQLIERFVPPEHPLVP-----QLHEAMHYAAAMGGKRVRPLLVW 76

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                   +     R   A+E +H YSL+HDDLP MD+  +RRG+PT H+Q+ E  A++A
Sbjct: 77  AAGECVQADDQALDRAACAVELVHAYSLVHDDLPCMDDDVLRRGQPTTHVQFGEALALLA 136

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+ L   A+E++ +P+  +   ++++L   L    G  GM GGQ LDI      +    +
Sbjct: 137 GDALQALAYEVL-TPEADIAPALQARLCALLARASGADGMAGGQTLDILATGGAVSGDDL 195

Query: 178 FMIQKMKTGALMCFACESGAIMAHAS----QNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTGAL+  +   GA                L  +G+ +G+ FQ+ DD+LD   D
Sbjct: 196 MHMHSRKTGALLKASVLMGAACGGFDTARPAQTYTALETYGDAVGLAFQVVDDILDVTAD 255


>gi|160897684|ref|YP_001563266.1| polyprenyl synthetase [Delftia acidovorans SPH-1]
 gi|160363268|gb|ABX34881.1| Polyprenyl synthetase [Delftia acidovorans SPH-1]
          Length = 316

 Score =  194 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 124/239 (51%), Gaps = 14/239 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
             P  + +   R ++ L          +       L  A+RYA+L GGK++R  LV   A
Sbjct: 21  DFPCWMTDRLARTESALSQ-------WVGVDAPAGLGEAMRYAVLDGGKRLRPLLVWAAA 73

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              +     A+R G A+E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ E +A++AG+ 
Sbjct: 74  EAVDGLQPAAVRAGCAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEASALLAGDA 133

Query: 123 LLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           L   AFE++         + D ++++L   L    G QGM GGQ +D+      + E Q+
Sbjct: 134 LQALAFELLVPEPDQAGSMPDALQARLCRLLGRAAGAQGMAGGQAIDLASVGLQLSEAQL 193

Query: 178 FMIQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + ++KTGAL+  +   GA           + L  +G+ LG+ FQ+ DD+LD   D  
Sbjct: 194 REMHRLKTGALLHASVLMGAACKEGVDAQAWQALSDYGQALGVAFQVVDDILDVVADSA 252


>gi|88812690|ref|ZP_01127937.1| geranyltranstransferase [Nitrococcus mobilis Nb-231]
 gi|88790106|gb|EAR21226.1| geranyltranstransferase [Nitrococcus mobilis Nb-231]
          Length = 298

 Score =  194 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
           L   L E   R++  L+  L    +H       RL  A+RYA+LGG K++R  LV     
Sbjct: 4   LERYLPEYQARVEAALERWLPPAQTH-----PARLHEAMRYAVLGGGKRMRPLLVYATGD 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              +          A+E IHCYSL+HDDLP+MD+  +RRG+PT H  YDEVTAI+ G+ L
Sbjct: 59  ALRLPRQVLDAPACAVELIHCYSLVHDDLPAMDDDDLRRGRPTCHRAYDEVTAILVGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFM 179
            + AF ++S  +      +  R +++  L+   G +GM GGQ LD +     +   ++  
Sbjct: 119 QSLAFRVLSHCRDGEAGPVQGRLRMIEVLSLAAGSRGMAGGQSLDYEAVGRQVTVAELED 178

Query: 180 IQKMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +   KTGAL+  +   GA+    A+    ERL  + + +G+ FQ+ DD+LD   D  +
Sbjct: 179 MHIHKTGALIRASVMLGALADTTANTTCTERLDHYAKCVGLAFQVQDDVLDVIGDEAR 236


>gi|307543898|ref|YP_003896377.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581]
 gi|307215922|emb|CBV41192.1| octylprenyl diphosphate synthase [Halomonas elongata DSM 2581]
          Length = 333

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 12/233 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAI-RYAL-LGGKKIRSFLVTE 60
           +P++L      I  ++ +        +QTQ   R  L+ AI +Y +  GGK++R  LV  
Sbjct: 6   VPTQLTTPDTPIHAVVAEDFAAVNRTIQTQLASRIPLVEAIGQYIVDSGGKRMRPLLVLL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A          + +   IE +H  +L+HDD+  +D  ++RRG+ T +  +    +++ G
Sbjct: 66  AARSLGYEGDQHVALATLIEFMHTSTLLHDDV--VDESHMRRGRATANDAWGNAPSVLVG 123

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L + +F+++    +     +R   +LS       +G +  Q+ ++ +  +DE   F  
Sbjct: 124 DFLYSRSFQMMVGVGS-----MRIMEILSAATCTIAEGEV-QQLTNVGNPDVDEAAYFET 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + KT  L   A   GAI+A A+  ++  L+ +G  LG+ FQL DDLLD   D
Sbjct: 178 IQGKTAMLFEAASHCGAIIADATPEQEAALQAYGRYLGLAFQLVDDLLDYRGD 230


>gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu]
          Length = 294

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
               ++    R++  L   L       +T    +L  A+RYA+LGG K++R  L      
Sbjct: 3   FEQWMRSVLDRVEDALGHYLP-----AETVVPAQLHEAMRYAVLGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L            AA+E IH YSL+HDD+P MD+  +RRGKPTVH+QYDE TA++ G+ L
Sbjct: 58  LTGATEAARNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEPTALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            + AF  ++           + L+  L    G  GM GGQ +D+      +   Q+  + 
Sbjct: 118 QSQAFVALTDADALAPAQQ-AALVRELALASGSIGMAGGQAIDLASVGMKLTREQLETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  A   GA+     S +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRAAVRMGALAGETPSADAMAALDVYAAAVGLAFQVVDDILDVTTDSA 231


>gi|288965921|pdb|3LOM|A Chain A, Crystal Structure Of Geranyltransferase From Legionella
           Pneumophila
 gi|288965922|pdb|3LOM|B Chain B, Crystal Structure Of Geranyltransferase From Legionella
           Pneumophila
          Length = 313

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + + ++R +  L+ LL +           ++ SA+ YAL  GGK+IR  LV     L +V
Sbjct: 13  IDKYTQRHELYLEQLLNEIIIP-----APQIRSALHYALFSGGKRIRPILVYLAGDLIDV 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      + AA+E  HCYSLIHDDLP+MDN  +RRGKP+ H  +DE TAI+ G+G+   A
Sbjct: 68  DQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 127

Query: 128 FEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183
            E++       L       +   L +  G+ GM+ GQ LD+ +     + E Q+  I  +
Sbjct: 128 IEVLLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLREIHLL 187

Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L+    E   A     S+  K  LR +G+++G++FQ+ DD LD   
Sbjct: 188 KTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 237


>gi|212709993|ref|ZP_03318121.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM
           30120]
 gi|212687402|gb|EEB46930.1| hypothetical protein PROVALCAL_01044 [Providencia alcalifaciens DSM
           30120]
          Length = 323

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          +    ++V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAGRSLGYSEHKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+A+A+  +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPDITEESYMQVIYSKTARLFEAASHASAILANATPEQEKALQDYGRYIGTAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|182418006|ref|ZP_02949312.1| geranyltranstransferase [Clostridium butyricum 5521]
 gi|237668434|ref|ZP_04528418.1| putative geranyltranstransferase [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182378177|gb|EDT75712.1| geranyltranstransferase [Clostridium butyricum 5521]
 gi|237656782|gb|EEP54338.1| putative geranyltranstransferase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 288

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 77/230 (33%), Positives = 125/230 (54%), Gaps = 12/230 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            K I+  LD+         +  +N  +  A  Y++ +GGK+IR  L      ++   +  
Sbjct: 6   RKDINDYLDNYFKN-----KGIYNKVIYDASGYSINIGGKRIRPILFALSYYIYKNEYKN 60

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L +  +IE IH YSLIHDDLP MD+  +RRGKPT H  + E  A++AG+ LL  A  ++
Sbjct: 61  ILPMACSIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDNLLNEAMILM 120

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
                +   N   +    +  + G +GM+GGQ++D+  E   I + ++  +   KTGAL+
Sbjct: 121 MDYSLKNGGNSL-KAAYEIASSAGAEGMIGGQVVDVISEGKKISKDELEYMHAKKTGALI 179

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
             +   GA++A A +++ + LR +GE LG++FQ+ DD+LD   D   L K
Sbjct: 180 RASIVGGAVLAGACESDVKILRTYGEKLGLVFQIKDDILDVVGDADVLGK 229


>gi|253686958|ref|YP_003016148.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753536|gb|ACT11612.1| Trans-hexaprenyltranstransferase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 323

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   + N    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
 gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
          Length = 328

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 13/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
            ++   K +   +   L       +T    +L  A+RYAL  G+ + + +      L   
Sbjct: 36  YVKSKFKAVSISIQHALPPPFKRPETL---QLHEAMRYALSQGRLMCAIVCIAACELVGG 92

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+    A+E I   + + DDLPS+DN  +R GKPTVH  +   TA+ AG  LL   
Sbjct: 93  SQDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPTVHCAFGIPTALFAGTALLVLG 152

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI----QDEFIDETQVFMIQKM 183
           FE ++      + +  ++++  ++  +G  G+L GQ +D+        ++   +  +   
Sbjct: 153 FEHLA---AHYRGDTAARMVGEVSRAVGSTGLLAGQAVDMGIQNAGRAVELETLEFVHLH 209

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           KT AL+  +   GAI   AS  + E LR +G   G+++Q+ DD+ D     E+L K
Sbjct: 210 KTSALLEASLVIGAIAGGASDQDIEALRAYGRVTGLLYQIVDDIADATKTTEELGK 265


>gi|313884672|ref|ZP_07818428.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620040|gb|EFR31473.1| geranyltranstransferase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 300

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 5/204 (2%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLI 88
           +  +    ++  + Y+L  GGK++R  +V     +F   N    L    A+E IH YSLI
Sbjct: 22  LSIEAPLEMVKPMLYSLKNGGKRLRPLMVLLVIDIFEQANLKDGLSTAFALEYIHTYSLI 81

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRG+PT H+Q+DE TAI+AG+ LLT AF +I+  + +LK   R +L+ 
Sbjct: 82  HDDLPAMDNDDLRRGQPTNHVQFDEATAILAGDALLTDAFALIAQ-EAKLKPRQRLKLIE 140

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L+ + G  GM+ GQ+ DI+ E   +    +  I ++KTG L  +AC++GAI++ AS  E
Sbjct: 141 LLSRSAGSTGMVAGQLFDIRAENQTLTIEALKNIHRLKTGRLFSYACQAGAIISDASDKE 200

Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
            + +  F +  G+ +Q+ +DL D 
Sbjct: 201 LKLIDEFAQAFGLAYQIHNDLQDV 224


>gi|126662951|ref|ZP_01733949.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38]
 gi|126624609|gb|EAZ95299.1| putative isoprenyl synthetase [Flavobacteria bacterium BAL38]
          Length = 324

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 12/216 (5%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D +    +  +  +    L   I Y L LGGK++R  L    + +FNV+   A+    AI
Sbjct: 9   DKIANHFSQIVANKEPKNLYEPIEYILSLGGKRMRPVLTLMASEVFNVDCEKAVPAATAI 68

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H +SLIHDD+  MD+  +RRG  TVH ++D  T I++G+ +L  A++   + + +  
Sbjct: 69  EVFHNFSLIHDDI--MDDAPLRRGNQTVHEKWDLNTGILSGDAMLILAYQFFENYEPKTF 126

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESG 196
                   L+   +     +  GQ  D+  E  D+    +   + + KT  L+  A + G
Sbjct: 127 QK------LAKLFSKTALEVCEGQQYDVDFETRDDVTIPEYLKMIEYKTAVLVGAAMKMG 180

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AI+A  S    + +  FG NLGI FQL DD LD   
Sbjct: 181 AIVAETSDENADLIYDFGLNLGIAFQLQDDYLDAFG 216


>gi|295136374|ref|YP_003587050.1| isoprenyl synthetase [Zunongwangia profunda SM-A87]
 gi|294984389|gb|ADF54854.1| isoprenyl synthetase [Zunongwangia profunda SM-A87]
          Length = 324

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
            L      +  +    L   + Y L LGGK++R  LV     +F+ ++  AL    AIE 
Sbjct: 11  FLKYLKEKITIKEPANLYEPMVYILGLGGKRLRPVLVLMATEIFDKDYKKALDASLAIEI 70

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
            H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++  + +      
Sbjct: 71  FHNFSLVHDDI--MDDAPLRRGKATVHEKWDVNTGILSGDAMLINAYQLFENYEGDTFKE 128

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAI 198
                 L+         +  GQ  DI  E  D+        + + KT  L+  + + GAI
Sbjct: 129 ------LAQLFTKTAIEVCEGQQYDIDFETRDDVSIDDYLKMIEYKTAVLVGASLQMGAI 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +A   +  K+ +  FG  LGI FQL DD LD   D PK
Sbjct: 183 VAEVDEECKKAIYQFGRLLGIAFQLQDDFLDAFGD-PK 219


>gi|124003018|ref|ZP_01687869.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
           [Microscilla marina ATCC 23134]
 gi|123991668|gb|EAY31076.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
           [Microscilla marina ATCC 23134]
          Length = 323

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 12/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I T+  D+    A     +H   L   IRY + LGGK++R  LV    SLF+ NH  A+ 
Sbjct: 3   IKTLQTDIHTALAGLQYGEHPVELYEPIRYIMSLGGKRMRPLLVLLGYSLFDDNHQKAMN 62

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              ++E  H ++L+HDD+  MD   +RRGKPT+H +++  T I++G+ +L  A+E++   
Sbjct: 63  AALSVEVFHNFTLVHDDI--MDEAPLRRGKPTIHQKWNTNTGILSGDVMLVQAYELLLDI 120

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCF 191
            +     +  +       N     +  GQ LD+  E ID   E     + ++KT  L+ +
Sbjct: 121 DSAHLKRVIGKF------NRCAAEVCEGQQLDMNFEHIDAVPEADYLNMIRLKTAVLLGY 174

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + E G I+A+A++   + L  FG N+G+ FQL DDLLD   D  K
Sbjct: 175 SLELGGIVANANKVAADLLNGFGVNIGVGFQLMDDLLDVYADAAK 219


>gi|197104377|ref|YP_002129754.1| geranyltranstransferase [Phenylobacterium zucineum HLK1]
 gi|196477797|gb|ACG77325.1| geranyltranstransferase [Phenylobacterium zucineum HLK1]
          Length = 292

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 98/233 (42%), Positives = 138/233 (59%), Gaps = 6/233 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
            L  ++ E +  +   LD+LL +           RL  A+RYA LG GK++R+F   E  
Sbjct: 2   DLSRRVAEAADLVTVALDELLPRGEGP-----ESRLTEAMRYAALGPGKRLRTFFALETG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F+++    LR   A+ECIH YSL+HDDLP MD+  +RRG+PTVH  YDE TA++AG+ 
Sbjct: 57  RMFDLDDRPVLRSACALECIHAYSLVHDDLPCMDDDDVRRGRPTVHKAYDEATAVLAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T AFEI++ P T     IR++L+  L H  G +GM GGQM+DI     D   V  +Q+
Sbjct: 117 LQTAAFEILAHPDTHPDGGIRAELVARLAHASGARGMAGGQMIDILGVREDLGGVARMQR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +KTGAL+  A E   ++A A   E+  L  F  +LG+ +Q+ DDLLD E D  
Sbjct: 177 LKTGALIACAFELPLVLARAMDGERHALMNFAHDLGLAYQIVDDLLDAEGDEA 229


>gi|15922378|ref|NP_378047.1| geranylgeranyl pyrophosphate synthetase [Sulfolobus tokodaii str.
           7]
 gi|15623167|dbj|BAB67156.1| 329aa long hypothetical geranylgeranyl pyrophosphate synthetase
           [Sulfolobus tokodaii str. 7]
          Length = 329

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 9/224 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
            + I++++ +    +++    + L  A  Y    GGK++R  ++   A L   +   A  
Sbjct: 7   FNRIVENVNINIEKYLKGDIQE-LYEASFYLFKAGGKRLRPLILVSSADLLGGDLNRAYL 65

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            GA++E +H ++LIHDD+  MD    RRG PTVH+++    AI+AG+ L   AFEI++  
Sbjct: 66  AGASVEVLHTFTLIHDDI--MDEDTTRRGMPTVHVKWGIPMAILAGDLLHAKAFEILNEA 123

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
              +  N  ++     T  I +  +  GQ LD+Q E    + E +   + K KT  L   
Sbjct: 124 FRGMSSNKITRAFEIFTKAIII--ISEGQALDMQFEDKVTVSEEEYLDMIKRKTAMLFSS 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   G ++A  ++ E + L  +G NLGI FQ+ DD+L    D  
Sbjct: 182 SAALGGLIATDNEKEIQALADYGLNLGISFQIVDDILGLIADEK 225


>gi|254805697|ref|YP_003083918.1| geranyltranstransferase [Neisseria meningitidis alpha14]
 gi|254669239|emb|CBA08097.1| geranyltranstransferase [Neisseria meningitidis alpha14]
 gi|325145254|gb|EGC67533.1| geranyltranstransferase [Neisseria meningitidis M01-240013]
          Length = 298

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L  V      +  AAIE IH YSL+HDD+P+MDN  +RRGKPT H+QYDE TA++ G
Sbjct: 59  ASELGGVVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATALLVG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           + L T AF+++S P         +   +L+               L    + + +  +  
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|54298220|ref|YP_124589.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris]
 gi|53752005|emb|CAH13431.1| hypothetical protein lpp2278 [Legionella pneumophila str. Paris]
          Length = 298

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + + ++R +  L+ LL +           ++ SA+ YAL  GGK+IR  LV     L +V
Sbjct: 6   IDKYTQRHELYLEQLLNEIIIP-----APKIRSALHYALFSGGKRIRPILVYLAGDLIDV 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      + AA+E  HCYSLIHDDLP+MDN  +RRGKP+ H  +DE TAI+ G+G+   A
Sbjct: 61  DQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 120

Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183
            E +++     L       +   L +  G+ GM+ GQ LD+ +     + E Q+  I  +
Sbjct: 121 IEVVLTRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKLSVTEEQLREIHLL 180

Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L+    E   A     S+  K  L+ +G+++G++FQ+ DD LD   
Sbjct: 181 KTGKLILACFEMVLAAQNEVSEQIKSALKTYGKHIGLVFQMQDDYLDLYA 230


>gi|224025695|ref|ZP_03644061.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM
           18228]
 gi|224018931|gb|EEF76929.1| hypothetical protein BACCOPRO_02436 [Bacteroides coprophilus DSM
           18228]
          Length = 327

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 21/235 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E  KRI   ++ L         ++    L   I Y L LGGK++R  L+    +L+  +
Sbjct: 7   EELMKRIHAYIEQL-------SYSREPKGLYDPIEYVLALGGKRLRPVLMLLAYNLYRED 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             +     A IE  H ++L+HDDL  MDN  +RRGKP VH +++E TAI++G+ +L  ++
Sbjct: 60  VESIFSQAAGIETYHNFTLLHDDL--MDNADMRRGKPVVHKKWNENTAILSGDAMLILSY 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKT 185
           + +     Q       ++M           +  GQ  D++ E  ++    +   + ++KT
Sbjct: 118 QFM---MNQCPPEHVQEVMEIFGRTA--LEVCEGQQWDMEFESRNDVTVGEYIEMIRLKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
             L+  A + GA++  AS  + ++L  FG  +G+ FQL DD LD   +     KK
Sbjct: 173 SVLLAAALKIGAVLGGASSADAQKLYDFGIRMGLAFQLQDDYLDVYGNPAVFGKK 227


>gi|329121102|ref|ZP_08249733.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
 gi|327471264|gb|EGF16718.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
          Length = 284

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 83/228 (36%), Positives = 133/228 (58%), Gaps = 10/228 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E    I+  L  LL       Q   +  L  ++ Y+LL  GK+IR  L      +F V
Sbjct: 6   LKEKRNLINKHLAGLL-----KTQRPEHKILFDSMNYSLLSNGKRIRGCLFLFILEMFKV 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++L  L + A++EC+H YSLIHDDLP MDN   RRG  T H +Y E  A+ AG+ LLT+A
Sbjct: 61  DYLQYLDIAASVECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
           F++IS  K   +D  +   +LS+    G +GM+ GQ   + I+++ I+  ++ ++ K KT
Sbjct: 121 FQLISQAKFSAEDRCKLIEILSIA--AGAEGMVAGQVHDIQIENKSIELDELKLLDKFKT 178

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           G ++    +    + H S ++ ++LR F ++LG++FQ+ DD+LD +ED
Sbjct: 179 GRMIKTPVDMAIQLTHMSISDADQLRKFAKHLGLLFQITDDILDYKED 226


>gi|193213417|ref|YP_001999370.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086894|gb|ACF12170.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 332

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 19/239 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
              + ++ Q+   +I+  L       A+    Q  + L +  RY L G GK+IR FL   
Sbjct: 7   QAQVETRYQQYHAKINEAL-------AACFPKQSPETLYAPARYILEGKGKRIRPFLTLL 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +   + +   AL V   IE +H ++L+HDD+  MD   +R G+PTVH Q+D   AI++G
Sbjct: 60  ASEAVSGSSENALGVALGIEVLHNFTLMHDDI--MDAADLRHGRPTVHKQWDVNAAILSG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
           + ++ YA+E+     +     +          N     +  GQ LD++ E    +     
Sbjct: 118 DMMIAYAYELALKAISSRHAEM------IHIFNDANITICEGQALDMELEQRKDVTIADY 171

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +   KTG L+  A E+G +  + +  +   L  FGE +G  FQ+ DD LD      K
Sbjct: 172 LDMISKKTGRLISAALEAGGVAGNGTPEQIAALVTFGEKIGRAFQIQDDYLDIMAGDGK 230


>gi|126173210|ref|YP_001049359.1| polyprenyl synthetase [Shewanella baltica OS155]
 gi|152999569|ref|YP_001365250.1| polyprenyl synthetase [Shewanella baltica OS185]
 gi|160874188|ref|YP_001553504.1| polyprenyl synthetase [Shewanella baltica OS195]
 gi|304410433|ref|ZP_07392051.1| Polyprenyl synthetase [Shewanella baltica OS183]
 gi|307304525|ref|ZP_07584275.1| Polyprenyl synthetase [Shewanella baltica BA175]
 gi|125996415|gb|ABN60490.1| Trans-hexaprenyltranstransferase [Shewanella baltica OS155]
 gi|151364187|gb|ABS07187.1| Polyprenyl synthetase [Shewanella baltica OS185]
 gi|160859710|gb|ABX48244.1| Polyprenyl synthetase [Shewanella baltica OS195]
 gi|304350917|gb|EFM15317.1| Polyprenyl synthetase [Shewanella baltica OS183]
 gi|306911927|gb|EFN42351.1| Polyprenyl synthetase [Shewanella baltica BA175]
 gi|315266420|gb|ADT93273.1| Polyprenyl synthetase [Shewanella baltica OS678]
          Length = 331

 Score =  194 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       D+++   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSMKVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATPEQETALGNYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|307611173|emb|CBX00817.1| hypothetical protein LPW_25211 [Legionella pneumophila 130b]
          Length = 298

 Score =  194 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + + ++R +  L+ LL +           ++ SA+ YAL  GGK+IR  LV     L +V
Sbjct: 6   IDKYTQRHELYLEQLLNEIVIP-----APQIRSALHYALFSGGKRIRPILVYLAGDLIDV 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      + AA+E  HCYSLIHDDLP+MDN  +RRGKP+ H  +DE TAI+ G+G+   A
Sbjct: 61  DQEVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 120

Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183
            E ++      L       +   L +  G+ GM+ GQ LD+ +     + E Q+  I  +
Sbjct: 121 IEVVLMRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKSSVTEEQLRGIHLL 180

Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L+    E   A     S+  K  LR +G+++G++FQ+ DD LD   
Sbjct: 181 KTGKLILACFEMVLAAQHEVSEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230


>gi|283769470|ref|ZP_06342366.1| putative geranyltranstransferase [Bulleidia extructa W1219]
 gi|283103738|gb|EFC05124.1| putative geranyltranstransferase [Bulleidia extructa W1219]
          Length = 276

 Score =  194 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 14/215 (6%)

Query: 30  HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            +    +  L  A+ YAL+  GK+IR  ++      F +          A+E IH YSLI
Sbjct: 9   SLSIYEDGVLKKAMEYALMTKGKRIRPQIIFHTLKAFGLQEELGYAYACALEYIHTYSLI 68

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MD+  +RRGKPTVH+ + E  AI+AG+ LLT +F  ++      K N+++  +L
Sbjct: 69  HDDLPAMDDDVLRRGKPTVHVSFGEDLAILAGDALLTESFYQLTKNTLSDKQNLKALEVL 128

Query: 149 SLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           S   + G  GM+ GQ++D++ ++F  +  +  + + KTG L+  + E GAI A    N+ 
Sbjct: 129 S--SHAGANGMVLGQVMDMRTNQFSTQEDIETMLEKKTGRLLESSFELGAIAA----NQL 182

Query: 208 ERLRCF---GENLGIIFQLADDLLDCE---EDLPK 236
           E+L  F   G+ +G+ FQ+ DDLL+ E   E+L K
Sbjct: 183 EQLMSFQEAGKWIGLAFQIQDDLLEVEKTTEELGK 217


>gi|317493609|ref|ZP_07952030.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918552|gb|EFV39890.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 323

 Score =  194 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLSARALNYTGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTSLQS-----LRVLELMSEATNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI+A A+  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPNITEENYMRVIYSKTARLFEAAAQSSAILAGATHEQEIALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|318604611|emb|CBY26109.1| octaprenyl-diphosphate synthase; Dimethylallyltransferase;
           Geranyltranstransferase (farnesyldiphosphate synthase);
           Geranylgeranyl pyrophosphate synthetase [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 306

 Score =  194 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +L  + +R++  L D +           N  L+ A+RY A+LGGK++R +LV    
Sbjct: 9   DFNQQLAAHQQRVNQALLDFIAPL-----PFGNSDLVEAMRYGAVLGGKRLRPYLVYATG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F ++  +     AAIECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG+ 
Sbjct: 64  QMFGLSLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILAGDA 123

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  P   + D  R  ++  L H  G+ GM GGQ LD+  E   I    +  
Sbjct: 124 LQTLAFSILAEAPMPDVADKDRLSMIAELAHASGVAGMCGGQALDLAAESRQITLDDLEK 183

Query: 180 IQKMKTGALMCFACE-SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KTGAL+  A            +     L  +   +G+ FQ+ DD+LD   D   + 
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGALGREALPLLDRYANAIGLAFQVQDDILDVIGDTATIG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|311109204|ref|YP_003982057.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans
           A8]
 gi|310763893|gb|ADP19342.1| polyprenyl synthetase family protein [Achromobacter xylosoxidans
           A8]
          Length = 308

 Score =  194 bits (493), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 15/222 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           K +D ++ + L      ++T  +  + +       GGK++R  +V   A           
Sbjct: 2   KAVDAVIRERLNSEVVLIRTIGDYIIGA-------GGKRMRPAMVLMVARALGYEGTHHQ 54

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +FE++  
Sbjct: 55  LLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLVGDYLYSRSFEMMVE 112

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             +     +R   +LS    +  +G +  Q+L++ D  + + +   + + KT  L   A 
Sbjct: 113 ANS-----MRVMSILSEATTVIAEGEVL-QLLNVHDPDVSQERYLQVVRYKTAKLFEAAA 166

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + GA++A A+  ++     +G ++G  FQL DD+LD   D  
Sbjct: 167 QVGAVLAGATPEQEAAAAAYGRHVGTAFQLVDDVLDYSGDAA 208


>gi|307637619|gb|ADN80069.1| Octa prenyl-diphosphate synthase/Dimethyl allyl transferase/Geranyl
           trans transferase /farnesyl diphosphate synthase/Geranyl
           geranyl pyrophosphate synthetase [Helicobacter pylori
           908]
 gi|325996213|gb|ADZ51618.1| Octaprenyl-diphosphate
           synthase/Dimethylallyltransferase/Geranyltranstransferas
           e/farnesyldiphosphate synthase/Geranylgeranyl
           pyrophosphate synthetase [Helicobacter pylori 2018]
 gi|325997807|gb|ADZ50015.1| Geranyltranstransferase [Helicobacter pylori 2017]
          Length = 303

 Score =  194 bits (493), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71
              +  L     H++  H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHRLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+  + L+  I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SN--SLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +    +   + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238


>gi|212709179|ref|ZP_03317307.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM
           30120]
 gi|212688091|gb|EEB47619.1| hypothetical protein PROVALCAL_00212 [Providencia alcalifaciens DSM
           30120]
          Length = 305

 Score =  194 bits (493), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 9/245 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M    P       ++    ++  LL +   +       L  A++Y  LLGGK++R FL  
Sbjct: 1   MPEQHPDTFARQQRQAHDRVNQYLLTSLDSLPFADLP-LAQAMKYGTLLGGKRLRPFLTY 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V+        AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  A++A
Sbjct: 60  AVGEMLGVSLDNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAVLA 119

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
           G+ L T+AF+++SS     + D  R  ++  L +  GL GM GGQ   LD + + +D   
Sbjct: 120 GDALQTFAFQLLSSASMPDVSDKDRIAMIAELAYASGLAGMCGGQALDLDAEGKRVDLVS 179

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED-- 233
           +  I + KTGAL+  A   GA  A          L  + E++G+ FQ+ DD+LD   D  
Sbjct: 180 LERIHQHKTGALIRAAIRLGAYAAGHKGYQALTNLDKYAESIGLAFQVQDDILDVIGDSA 239

Query: 234 -LPKK 237
              K+
Sbjct: 240 VTGKR 244


>gi|172056944|ref|YP_001813404.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
 gi|171989465|gb|ACB60387.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
          Length = 289

 Score =  194 bits (493), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 89/232 (38%), Positives = 135/232 (58%), Gaps = 12/232 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L E   +++  L+  + +  +       DRL  A+ Y+L  GGK++R  L+      + V
Sbjct: 4   LTEWKTQVEQALETFMNRLEA------PDRLREAMLYSLDAGGKRVRPALIYAVLDAYGV 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +  T     AA+E IH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+AG+ LLT A
Sbjct: 58  DRKTGDATAAALEMIHTYSLIHDDLPAMDDDDMRRGRPTNHIEFDEATAILAGDALLTNA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMK 184
           F  +   +T     ++ +L+  L    G  GM+GGQ+ D+  E     D  ++  I + K
Sbjct: 118 FTCL--LETMAAAEVKVKLLERLAAAAGAAGMVGGQLDDMLGERGGISDAEELESIHRRK 175

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           TGAL+ FA E+G I+A  +  + E+L+ +G +LGI FQ+ DD+LD   D  K
Sbjct: 176 TGALLIFAVEAGGILAGVADEDLEQLKRYGRHLGIAFQIQDDILDVTGDADK 227


>gi|218128733|ref|ZP_03457537.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697]
 gi|217989188|gb|EEC55503.1| hypothetical protein BACEGG_00304 [Bacteroides eggerthii DSM 20697]
          Length = 324

 Score =  194 bits (493), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 12/222 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +L+ +    A     +    L   + Y L +GGK+IR  L+    +L+  +  +     
Sbjct: 6   ELLEKINSHIADLQFVRTPKGLYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H Y+L+HDDL  MD    RRGK TVH  +++  AI++G+ +L  A++ ++    
Sbjct: 66  TGIEVYHNYTLLHDDL--MDRADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPV 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
                +     L+         +  GQ +D++ E  +   E +   + ++KT  L+  + 
Sbjct: 124 GHLKEVMDLFSLT------ALEICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + GA++  AS  + ERL  FG N+G+ FQL DDLLD   D  
Sbjct: 178 KIGALLGGASAEDAERLYDFGVNMGVAFQLKDDLLDVYGDAA 219


>gi|157369322|ref|YP_001477311.1| geranyltranstransferase [Serratia proteamaculans 568]
 gi|157321086|gb|ABV40183.1| Polyprenyl synthetase [Serratia proteamaculans 568]
          Length = 306

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 127/238 (53%), Gaps = 10/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ   +R D  L + +          ++  +++A+R+ ALLGGK++R FLV    
Sbjct: 9   AFSDQLQALRQRADRTLLNFIAPL-----PFNDGNMVAAMRHGALLGGKRLRPFLVYTTG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+        AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ 
Sbjct: 64  QMFGVSLNNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDA 123

Query: 123 LLTYAFEIISSPKTQLKDN-IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L T AF I++  +        R  ++  L    G+ GM GGQ LD++ E   I    +  
Sbjct: 124 LQTLAFSILADAEMPDVALCDRLAMVSELATASGVAGMCGGQSLDLEAEDRQIGLEALEQ 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + KTGAL+  A   GA+ A         +L  +   +G+ FQ+ DD+LD   +  K
Sbjct: 184 IHRHKTGALIRAAVRLGALAAGEPGRAALVQLDRYAAAIGLAFQVQDDILDVVGETEK 241


>gi|21673095|ref|NP_661160.1| isoprenyl synthetase [Chlorobium tepidum TLS]
 gi|21646167|gb|AAM71502.1| isoprenyl synthetase [Chlorobium tepidum TLS]
          Length = 332

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 19/239 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
              + SK ++   +I+  L       A+    +    L    RY L G GK+IR FL   
Sbjct: 7   QAQVESKYRQYHAKINEAL-------AACFPKEKPATLYDPARYILEGKGKRIRPFLTLL 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +     AL V   IE +H ++L+HDD+  MD   +R G+PTVH Q++   AI++G
Sbjct: 60  AAEAVSGKSDNALGVALGIEVLHNFTLMHDDI--MDQADLRHGRPTVHKQWNVNAAILSG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
           + ++ YA+E+     +     I          N     +  GQ LD++ E    +     
Sbjct: 118 DMMIAYAYELALKAISSRHAEI------IHIFNDANITICEGQALDMELEQRKDVTIADY 171

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +   KTG L+  A E+G +    +  +   L  FGE +G  FQ+ DD LD      K
Sbjct: 172 LDMISKKTGRLISAALEAGGVAGDGTPEQIAALVTFGEKIGRAFQIQDDYLDIMAGDGK 230


>gi|221640208|ref|YP_002526470.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131]
 gi|221160989|gb|ACM01969.1| Decaprenyl diphosphate synthase [Rhodobacter sphaeroides KD131]
          Length = 331

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + L E+   ++ ++ + +    +    +    L+ A      GGK++R  L    A L
Sbjct: 12  LAAWLAEDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 65

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + + A +E IH  +L+HDD+  +D  + RRGKPT ++ +D  ++++ G+ L 
Sbjct: 66  CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 123

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +F+++    +     +R   +L+       +G +  Q+   QD    E     + + K
Sbjct: 124 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL   A + G ++A   + + E L  +G+ LGI FQ+ DDLLD   
Sbjct: 178 TAALFAAATQVGGVVAGMPEAQVEALHAYGDALGIAFQIVDDLLDYGG 225


>gi|42519419|ref|NP_965349.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533]
 gi|41583707|gb|AAS09315.1| geranyltranstransferase [Lactobacillus johnsonii NCC 533]
          Length = 288

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 17/233 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           KL++  ++    +D+ L +   H+ T+  N      + Y+++ GGK++R  L        
Sbjct: 2   KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETL 58

Query: 66  NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           N       LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+GLL
Sbjct: 59  NHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLL 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179
               + I+         I        +  +G  GM+GGQ LDI     D  +     +  
Sbjct: 119 PLGIQWITEGSNSAALAIVI------SQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQ 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ +KTG L+  + +  AI A A+ +E  RL  F +  G  +Q+ DDL+D  E
Sbjct: 173 MEWLKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225


>gi|313623887|gb|EFR94002.1| geranyltranstransferase [Listeria innocua FSL J1-023]
          Length = 293

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 85/222 (38%), Positives = 129/222 (58%), Gaps = 6/222 (2%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD+ L +  +    +   +L  ++ Y++  GGK+IR  LV       N+  +  L+  
Sbjct: 13  KVLDESLFKEINMRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNIEPMRGLKTA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E IH YSLIHDDLP+MD+   RRGK T H  Y + TAI+AG+ LLT AF I++  + 
Sbjct: 71  TALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTLAFSILAEDEN 130

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L    R  L+  ++++ G +GM+GGQ  D++ E   +   ++  I   KTG L+ FA  
Sbjct: 131 -LSFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKTGELLIFAVT 189

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           S A +A A+  + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 190 SAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|157736691|ref|YP_001489374.1| geranyltranstransferase [Arcobacter butzleri RM4018]
 gi|157698545|gb|ABV66705.1| geranyltranstransferase [Arcobacter butzleri RM4018]
          Length = 286

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 14/226 (6%)

Query: 20  LDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRV 75
            +D LL+     +T H    D L   ++    GGK+ R  L+              A+ V
Sbjct: 8   FEDYLLKNLPISKTFHPHFEDALADMLK---AGGKRFRPMLLLSVVKSNKSLLVPNAMSV 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E +H YSLIHDDLP+MDN  +RRG  T+H +YDEVTAI+ G+ L T AF +I++  
Sbjct: 65  ALGVEFLHTYSLIHDDLPAMDNSDLRRGFQTLHKKYDEVTAILVGDALNTEAFNLIANA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFAC 193
             L ++I+ +L+  L HN G+ GM+ GQ +D   E   I   Q+  +   KT  L+  + 
Sbjct: 124 -SLHNDIKVELIKCLAHNGGINGMIIGQAIDCHFEKQKIQLNQLEFLHIHKTARLIAASL 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           + GAI++      +E+L  FG +LG++FQ+ DD++D    EE+  K
Sbjct: 183 KMGAIISEYDLQTQEKLYNFGIDLGLLFQIQDDIIDETCTEEEAGK 228


>gi|268319202|ref|YP_003292858.1| geranyltranstransferase [Lactobacillus johnsonii FI9785]
 gi|262397577|emb|CAX66591.1| geranyltranstransferase [Lactobacillus johnsonii FI9785]
          Length = 288

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 117/233 (50%), Gaps = 17/233 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           KL++  ++    +D+ L +   H+ T+  N      + Y+++ GGK++R  L        
Sbjct: 2   KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETL 58

Query: 66  NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           N       LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+GLL
Sbjct: 59  NHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLL 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179
               + I+         I        +  +G  GM+GGQ LDI     D  +     +  
Sbjct: 119 PLGIQWITEGSNSAALAIVI------SQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQ 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ +KTG L+  + +  AI A A+ +E  RL  F +  G  +Q+ DDL+D  E
Sbjct: 173 MEWLKTGCLIEASVKMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225


>gi|121610223|ref|YP_998030.1| polyprenyl synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121554863|gb|ABM59012.1| farnesyl-diphosphate synthase [Verminephrobacter eiseniae EF01-2]
          Length = 314

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 18/243 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L    Q +  +++  L   +   A          L  A+RYA+L GGK++R  LV    
Sbjct: 15  DLGGWQQNHLAQVEQALSQWVGHGA-------PAGLGEAMRYAVLDGGKRLRPLLVLAAY 67

Query: 63  SLF--NVNHLTALR------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
                      A           A+E IH YSL+HDDLP MDN  +RRGKPT H+++   
Sbjct: 68  QAVCSGQPAPCAWHDAAALRAACAVELIHAYSLVHDDLPCMDNDVLRRGKPTAHVRFGPA 127

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172
            A++AG+ L  +AFE+++     +    ++ L   L    G  GM GGQ +D+      +
Sbjct: 128 RALLAGDALQAFAFELLTPEDMPIPAATQAALCRLLARAAGSTGMAGGQAIDLASVGLRL 187

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E Q+  + ++KTGAL+  +   GA+   A+      L  +G  LG+ FQ+ DD+LD   
Sbjct: 188 TEGQLRQMHRLKTGALLQASVLMGAVCGQAAPAAYRALSDYGAALGLAFQVVDDILDVVA 247

Query: 233 DLP 235
           D  
Sbjct: 248 DSA 250


>gi|148359869|ref|YP_001251076.1| geranyltranstransferase [Legionella pneumophila str. Corby]
 gi|296107919|ref|YP_003619620.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy]
 gi|148281642|gb|ABQ55730.1| geranyltranstransferase [Legionella pneumophila str. Corby]
 gi|295649821|gb|ADG25668.1| geranyltranstransferase [Legionella pneumophila 2300/99 Alcoy]
          Length = 298

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 80/230 (34%), Positives = 123/230 (53%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           + + ++R +  L+ LL +           ++ SA+ YAL  GGK+IR  LV     L +V
Sbjct: 6   IDKYTQRHELYLEQLLNEIIIP-----APKIRSALHYALFSGGKRIRPILVYLAGDLIDV 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      + AA+E  HCYSLIHDDLP+MDN  +RRGKP+ H  +DE TAI+ G+G+   A
Sbjct: 61  DQGVLDIIAAALELTHCYSLIHDDLPAMDNDDLRRGKPSCHKAFDEATAILVGDGMQALA 120

Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKM 183
            E +++     L       +   L +  G+ GM+ GQ LD+ +     + E Q+  I  +
Sbjct: 121 IEVVLTRLSPLLPAAQVVAITQVLVNASGISGMVSGQSLDLSELAKLSVTEEQLREIHLL 180

Query: 184 KTGALMCFACES-GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L+    E   A     S+  K  LR +G+++G++FQ+ DD LD   
Sbjct: 181 KTGKLILACFEMVLAAQNEISEQIKSALRTYGKHIGLVFQMQDDYLDLYA 230


>gi|91205532|ref|YP_537887.1| octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C]
 gi|91069076|gb|ABE04798.1| Octaprenyl-diphosphate synthase [Rickettsia bellii RML369-C]
          Length = 334

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 120/220 (54%), Gaps = 11/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I   L D + Q  + + +  + ++ L+  + +Y L  GGK+IR  L    A +F+ N  
Sbjct: 13  KIQQDLKDEVAQLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYNGD 72

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           + +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L + +F++
Sbjct: 73  SHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 130

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           + +  +     I++  +L+    I  +G +   +   +   I+  +   I K KT  L  
Sbjct: 131 MVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRLINIEEYQQIVKSKTAELFG 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +C  GAI+A+ S +  + +  FG+ LG IFQ+ DDLLD 
Sbjct: 186 ASCSVGAIIANQSDDISKNMEEFGKLLGTIFQVIDDLLDY 225


>gi|15611931|ref|NP_223582.1| geranyltranstransferase [Helicobacter pylori J99]
 gi|4155442|gb|AAD06447.1| GERANYLTRANSTRANSFERASE [Helicobacter pylori J99]
          Length = 303

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71
              +  L     H++  H     +     L GGK+ R  L      SL            
Sbjct: 14  ERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+  + L+  I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SN--SLLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +    +   + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238


>gi|154147947|ref|YP_001405809.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP
           synthase) [Campylobacter hominis ATCC BAA-381]
 gi|153803956|gb|ABS50963.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Campylobacter hominis ATCC BAA-381]
          Length = 284

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/217 (35%), Positives = 116/217 (53%), Gaps = 7/217 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS-LFNVNHLTALRVGA 77
            ++ L +      + H      A+ Y L  GGK  R+ L       +       A+ +  
Sbjct: 10  FENYLRENPIKAPSFHP-YFEEALNYMLFAGGKHFRAQLCLGVVETMAPKKLSKAMPIAL 68

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE IH YSLIHDDLPS+DN   RRG  T+H +YDEV+AI+ G+ L T AF  IS     
Sbjct: 69  AIEMIHTYSLIHDDLPSVDNADFRRGIATIHKKYDEVSAILVGDALNTEAFYRISRA--D 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACES 195
           L DNI+ + +  L+ N G  GM+ GQ +D   E   ++ +QV  + ++KTGAL+  +   
Sbjct: 127 LNDNIKIKCVEILSKNAGSAGMVLGQAIDCFFEKKQLEISQVEFLHRLKTGALIGASLAL 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           GA ++   + + +++   G  LG+ FQ+ DDL+D   
Sbjct: 187 GATISEIPKEKTDKIYEIGLKLGLAFQINDDLIDATS 223


>gi|113869207|ref|YP_727696.1| trans-hexaprenyltranstransferase [Ralstonia eutropha H16]
 gi|113527983|emb|CAJ94328.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha H16]
          Length = 328

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L + +  + + +D ++   L      ++ Q  + ++ A      GGK++R  ++   A 
Sbjct: 11  ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLTAR 63

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L
Sbjct: 64  AMGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 121

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++    +     +R   +LS   N+  +G +  Q+L++ D  +   +   + + 
Sbjct: 122 YSRAFQMMVDAGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPDVTVERYLQVIRY 175

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   A + GA++A A    +E    +G  +G  FQL DD+LD   
Sbjct: 176 KTAKLFEAAAQLGAVLAGADAQMEEAAAEYGRRIGTAFQLIDDMLDYTA 224


>gi|317475481|ref|ZP_07934744.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908312|gb|EFV30003.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 324

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 12/222 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +L+ +    A     +    L   + Y L +GGK+IR  L+    +L+  +  +     
Sbjct: 6   ELLEKINSHIADLQFIRTPKGLYDPVTYVLSMGGKRIRPVLMLMAYNLYKEDVESVFSPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H Y+L+HDDL  MD    RRGK TVH  +++  AI++G+ +L  A++ ++    
Sbjct: 66  TGIEVYHNYTLLHDDL--MDRADKRRGKDTVHKVWNDNAAILSGDAMLVLAYQFMAQCPV 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFAC 193
                +     L+         +  GQ +D++ E  +   E +   + ++KT  L+  + 
Sbjct: 124 GHLKEVMDLFSLT------ALEICEGQQMDMEFERRNDVKEEEYLEMIRLKTSVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + GA++  AS  + ERL  FG N+G+ FQL DDLLD   D  
Sbjct: 178 KIGALLGGASAEDAERLYDFGVNMGVAFQLKDDLLDVYGDAA 219


>gi|227113758|ref|ZP_03827414.1| octaprenyl diphosphate synthase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 323

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   + N    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALDYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|134300012|ref|YP_001113508.1| trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1]
 gi|134052712|gb|ABO50683.1| Trans-hexaprenyltranstransferase [Desulfotomaculum reducens MI-1]
          Length = 320

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 24/239 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
              S+++++ + ++  +   ++Q+   + TQ +  LL+A      GGK++R         
Sbjct: 3   DFFSQVRKDLQVVEHEIKT-IVQSRDPLLTQTSIHLLNA------GGKRLRPAFALLAGK 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            ++ +    L +  A+E IH  +L+HDD+  +D+   RRG PTV   +    ++  G+ L
Sbjct: 56  FYHYSLEKLLPLAVALELIHMATLVHDDV--VDDSLTRRGTPTVKANWGNRISMHTGDYL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMI 180
              +  +IS  +  L   + +              M  G+M  I   +  E      F  
Sbjct: 114 FAKSLVLISQYENPLIAQVLADT---------SVMMCEGEMHQISTAYSAEQSWRDYFYR 164

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            K KT  L+  +C+ GA+   A + E + LR +G +LG+ FQ+ DD+LD   D   L K
Sbjct: 165 IKRKTALLIAASCQLGAVAVGAPEEEYKNLRRYGHHLGMAFQITDDILDMVADQSLLGK 223


>gi|33595027|ref|NP_882670.1| octaprenyl-diphosphate synthase [Bordetella parapertussis 12822]
 gi|33565103|emb|CAE40054.1| octaprenyl-diphosphate synthase [Bordetella parapertussis]
          Length = 321

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 16/234 (6%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   L + + ++ K +D ++ D L      ++T  +  + +       GGK++R  +V 
Sbjct: 1   MNLPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ 
Sbjct: 54  MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + +FE++        D++R   +LS    +  +G +  Q+L++ D  + + +   
Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQ 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A + GA++A AS  ++     +G  +G  FQL DD+LD   D
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRRVGTAFQLVDDVLDYSGD 219


>gi|218550470|ref|YP_002384261.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469]
 gi|218358011|emb|CAQ90657.1| octaprenyl diphosphate synthase [Escherichia fergusonii ATCC 35469]
 gi|324115209|gb|EGC09173.1| polyprenyl synthetase [Escherichia fergusonii B253]
 gi|325498768|gb|EGC96627.1| octaprenyl diphosphate synthase [Escherichia fergusonii ECD227]
          Length = 323

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  QGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPNITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEQGLQDYGRYLGTAFQLIDDLLDYSAD 219


>gi|87122767|ref|ZP_01078640.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121]
 gi|86161932|gb|EAQ63224.1| octaprenyl-diphosphate synthase [Marinomonas sp. MED121]
          Length = 327

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 24/226 (10%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNH-----LTAL 73
           D +L Q  S +       L+  I Y ++  GGK++R  LV   A               +
Sbjct: 19  DHILSQLKSEIP------LIEQIGYYIISNGGKRLRPLLVLMAARACGNADASNYQDNMV 72

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++   IE IH  +L+HDD+  +D   +RRGK T + ++    +++ G+ L + AF+I+  
Sbjct: 73  KMATIIEFIHTATLLHDDV--VDESDMRRGKKTANEEWGNAPSVLVGDFLYSRAFQIMVE 130

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             +     ++   +L+ T NI  +G +  Q+++  D    E     + + KT  L   A 
Sbjct: 131 VGS-----MQCMQILAETTNIISEGEV-QQLINCGDPSTSEESYLKVIQYKTAKLFEGAA 184

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             GAI+A+A++ +++ L  +G  +G  FQL DD++D     E++ K
Sbjct: 185 LCGAIVANANKEQQQALADYGTYVGTAFQLIDDVMDYTSTAEEMGK 230


>gi|109947621|ref|YP_664849.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba]
 gi|109714842|emb|CAJ99850.1| geranyltranstransferase [Helicobacter acinonychis str. Sheeba]
          Length = 303

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHRLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +Y+E +A++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYNETSAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--SLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLV 191

Query: 190 CFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLIMGLVASGNKDEELSKWLQDFGLKIGLCFQVLDDIIDVTQDEK 238


>gi|258647197|ref|ZP_05734666.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
           51259]
 gi|260853026|gb|EEX72895.1| geranylgeranyl diphosphate synthase [Prevotella tannerae ATCC
           51259]
          Length = 321

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 12/221 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRV 75
           +  L  +    +          L   I YAL GG K++R  L     SL++ +   A+  
Sbjct: 2   ENFLAQIENALSQQAYPTRPAGLYEPIAYALSGGGKRVRPHLTLLACSLYSDDPEKAIPA 61

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             ++E  H ++L+HDDL  MD   +RRG+PTV  ++D  TAI++G+ +L  AF  +    
Sbjct: 62  ALSVETYHNHTLLHDDL--MDGADLRRGRPTVFRKWDANTAILSGDTMLILAFNHLLEGG 119

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFA 192
                 +   L  +       + +  GQ  D+  E    + E +   + ++KT  L+  A
Sbjct: 120 YPNAAELLQLLART------AREVCEGQQYDMNFEQRNDVTEAEYIEMIRLKTSVLLACA 173

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + GA++A A  ++ + L  FGE +G+ FQL DD LDC  D
Sbjct: 174 LKMGALVAGAPADQADLLYHFGEQIGLAFQLQDDYLDCYGD 214


>gi|329118147|ref|ZP_08246859.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465807|gb|EGF12080.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 297

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 80/227 (35%), Positives = 123/227 (54%), Gaps = 10/227 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLT 71
             + +T+L++L+       +      L  A+RYA+LGG K++R  LV   + L   +   
Sbjct: 14  QAQTETLLENLMPS-----ENHAPQELHRAMRYAVLGGGKRLRPLLVLAASELGQADPDA 68

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                AA+E IH YSL+HDD+P+MDN  +RRGKPT HI Y E  A++AG+ L T AF+II
Sbjct: 69  TAHAMAAVELIHAYSLVHDDMPAMDNDSLRRGKPTCHIAYGEAAALLAGDALQTLAFDII 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALM 189
           + P   L    R Q+  +L    G  GM GGQ +D+ +  + + ++++  + ++KTGAL+
Sbjct: 129 TRPAA-LPAERRLQMAATLARASGSLGMAGGQAIDLANVGKTLTQSELEHMHRLKTGALI 187

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             A   G +            L  +   LG+ FQ+ DD+LDC  D  
Sbjct: 188 RAAVRLGGLACPDLDDTALHSLDSYAAALGLAFQVIDDVLDCAADTA 234


>gi|254455595|ref|ZP_05069024.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082597|gb|EDZ60023.1| geranyltranstransferase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 290

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 85/221 (38%), Positives = 135/221 (61%), Gaps = 3/221 (1%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           +++ I  D  +     +  Q N +L+ A++Y L  GGKKIRS ++ +  S+ ++++ T +
Sbjct: 4   KLNKIAKDTNIFLKDFINKQKNSKLILAMKYGLFPGGKKIRSKILIDIGSMMSIDYKTLI 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +GAA+ECIH Y+LIHDDLP MD+  IRRGKP+ HI++ E TAI+AGN L T A EI++S
Sbjct: 64  AIGAAVECIHAYTLIHDDLPCMDDDKIRRGKPSTHIKFGESTAILAGNSLQTMACEILTS 123

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCF 191
            K ++ D I+ +L+  L+   G  G+ GGQ LD   +   + + ++  ++  KTG L  F
Sbjct: 124 SKLKIGDKIKIELIKKLSECSGHLGVAGGQYLDLSYEKRKVSKKKIIEMEIKKTGKLFSF 183

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            C + AI+      E +     G  +G++FQ+ADDL+D   
Sbjct: 184 CCVAPAIIKKKDNQEIKFFEDLGSKIGLLFQIADDLIDFHG 224


>gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10]
 gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10]
          Length = 297

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 85/235 (36%), Positives = 133/235 (56%), Gaps = 8/235 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN   P   Q  +++I+ IL+       + +++   D L  ++ Y+L  GGK+IR  L+ 
Sbjct: 1   MNSK-PEFQQFLTEQIN-ILEARFPLLLNPLKS--PDILKESMLYSLNAGGKRIRPVLLL 56

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                         R  AA+E IH YSLIHDDLP+MD+  +RRGKPT H  Y E  AI+A
Sbjct: 57  SVLHAAGKPLEAGYRTAAALELIHTYSLIHDDLPAMDDDDLRRGKPTNHKVYGEDIAILA 116

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQV 177
           G+GLLT++F +IS  +  L  +++  L+  +T   G +GM+GGQ+ D+Q E   +   ++
Sbjct: 117 GDGLLTHSFNLISKDE-HLSADLKVALIADITDAAGPEGMVGGQVSDMQGEGKELTAEEL 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KTG L+  +  +G  +A  ++ + + L   G++LG+ FQ+ DDLLD E 
Sbjct: 176 EAIHHRKTGDLLSVSLMAGGKIAGLNEEDNKYLSLLGKHLGLAFQIKDDLLDIEG 230


>gi|300718598|ref|YP_003743401.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661]
 gi|299064434|emb|CAX61554.1| Octaprenyl diphosphate synthase [Erwinia billingiae Eb661]
          Length = 323

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N    L++ + Y ++  GGK+IR  +    A   N 
Sbjct: 2   NLEQINELTAQDMADVNATILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAARAVNY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + V A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  TGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     +R   ++S   N+  +G +  Q+++  D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LRVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +S AI+A A   +++ L+ +G  +G  FQL DDLLD   D
Sbjct: 174 LFEAAAQSSAILAEAVPEQEKALQDYGRFIGTAFQLIDDLLDYSAD 219


>gi|329667056|gb|AEB93004.1| geranyltranstransferase [Lactobacillus johnsonii DPC 6026]
          Length = 288

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 17/233 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           KL++  ++    +D+ L +   H+ T+  N      + Y+++ GGK++R  L        
Sbjct: 2   KLKDFQEKYTPQIDNFLKE---HLVTEIDNPTFSKIMSYSVMAGGKRLRPLLFLATLETL 58

Query: 66  NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           N       LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+GLL
Sbjct: 59  NHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLL 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179
               + I+         I        +  +G  GM+GGQ LDI     D  +     +  
Sbjct: 119 PLGIQWITEGSNSAALAIVI------SQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQ 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ +KTG L+  +    AI A A+ +E  RL  F +  G  +Q+ DDL+D  E
Sbjct: 173 MEWLKTGCLIEASVRMAAIYAGATDSELNRLDNFSKRFGRSYQIYDDLVDVVE 225


>gi|271499581|ref|YP_003332606.1| polyprenyl synthetase [Dickeya dadantii Ech586]
 gi|270343136|gb|ACZ75901.1| Polyprenyl synthetase [Dickeya dadantii Ech586]
          Length = 303

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 11/240 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L  +L  + +RID  L+  +           +  L+ A+ + ALLGGK++R FLV 
Sbjct: 1   MTDFLK-QLAAHHQRIDAALNHFISTL-----PFQSSPLVEAMAHGALLGGKRLRPFLVY 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               LF V+  +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+A
Sbjct: 55  TTGQLFAVSPDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILA 114

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I++  P   + D  R  ++  L    G+ GM GGQ LD+  E   +D   
Sbjct: 115 GDALQTLAFSILADAPMPHVSDRDRLAMISELASASGVAGMCGGQALDLAAEGHQVDLQT 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  +   GA+ A          L  +   +G+ FQ+ DD+LD   D  
Sbjct: 175 LERIHRHKTGALIRASVRLGALAAGERGRLALPYLDRYANAVGLAFQVQDDILDVIGDSA 234


>gi|256422682|ref|YP_003123335.1| polyprenyl synthetase [Chitinophaga pinensis DSM 2588]
 gi|256037590|gb|ACU61134.1| Polyprenyl synthetase [Chitinophaga pinensis DSM 2588]
          Length = 323

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 18/227 (7%)

Query: 20  LDDLLLQTASHMQTQH----NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
             DL +Q   H   +H      +L  A  + L +GGK+IR  L      LF+  H  A  
Sbjct: 4   FKDLTIQFGEHFSKEHFPKEPKKLYDAASHILNIGGKRIRPILSIMGNELFDDIHPDAFH 63

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           VG A+E  H ++L+HDD+  MD   +RR +PTVH  Y +  AI+AG+ +L   +E ++  
Sbjct: 64  VGTAVELFHNFTLVHDDI--MDKAPLRRNQPTVHTLYGDTAAILAGDVMLIKVYEYLNKV 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKTGALM 189
           +   K        L    N     +  GQ +D+  E ++  QV       +  +KT  L+
Sbjct: 122 QPHYKQK------LITAFNKAAIEVCEGQQIDMDFEDMEPEQVKYDDYVKMIALKTSVLL 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             + + GAI+   S   ++ +  FG+N+GI FQ+ DD LD   D  K
Sbjct: 176 AASLQMGAIIGGGSDYNQQHIYEFGKNIGIAFQIQDDYLDAFGDPEK 222


>gi|254284097|ref|ZP_04959065.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B]
 gi|219680300|gb|EED36649.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR51-B]
          Length = 321

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 17/234 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   + + +Q   +++D ++ + L      ++            Y +  GGK++R  LV 
Sbjct: 1   MIEAIRACVQSEVEQVDQLIIEQLHSDVDMVENVGQ--------YIVDAGGKRLRPLLVL 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                      + +R  A +E IH  +L+HDD+  +D   +RRG+PT +  +    +++ 
Sbjct: 53  LAGEALGGCTESHIRFSAVVEFIHTATLLHDDV--VDVSTLRRGRPTANEAFGNAPSVLV 110

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L T AF+++        DN+     ++ T N   +G +  Q+    +  IDE+Q   
Sbjct: 111 GDFLYTRAFQLMVQL-----DNMDLLRHMADTTNTIAEGEVL-QLARAGNPDIDESQYID 164

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   KT  L   AC+  A++A+     ++ L  +G NLGI FQ+ DD+LD E D
Sbjct: 165 VITRKTAILFASACQGAAMLANCDIKTQQALSQYGLNLGIAFQMIDDVLDYEGD 218


>gi|213582666|ref|ZP_03364492.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 319

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219


>gi|312884946|ref|ZP_07744636.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367423|gb|EFP94985.1| geranyltranstransferase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 294

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 92/245 (37%), Positives = 127/245 (51%), Gaps = 19/245 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALLG-GKKIRSFLV 58
           MN    S  Q NS  ++  L+ L           H D  L+ A++Y+LL  GK++R FLV
Sbjct: 1   MNEVFTSLKQRNSLELEKWLETL----------GHPDLSLVQAMKYSLLSEGKRVRPFLV 50

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                +            AAIECIH YSLIHDDLP+MD+  +RRG PT H+Q+DE TAI+
Sbjct: 51  YATGQILGSAVEDLDTAAAAIECIHTYSLIHDDLPAMDDDDLRRGHPTCHMQFDEATAIL 110

Query: 119 AGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           AG+ L T AF I+S  K   K    R +++  L +  G +GM  GQ LD+  E   +   
Sbjct: 111 AGDALQTLAFTILSEGKLSPKAEKNRIKMVQVLANASGARGMCLGQALDLNAEGKSVSLN 170

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
           Q+  I   KTG L+  A + GA+   +        L  + E +G+ FQ+ DD+LD   D 
Sbjct: 171 QLEAIHVNKTGELIKAAVKLGALSCGSLDDVTATHLDRYAEAIGLAFQVQDDILDLVSDT 230

Query: 234 --LPK 236
             L K
Sbjct: 231 DTLGK 235


>gi|288560181|ref|YP_003423667.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
           [Methanobrevibacter ruminantium M1]
 gi|288542891|gb|ADC46775.1| bifunctional short chain isoprenyl diphosphate synthase IdsA
           [Methanobrevibacter ruminantium M1]
          Length = 331

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/222 (34%), Positives = 106/222 (47%), Gaps = 10/222 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++     ++       L  A  Y    GGK +R  L          N   AL+  AAIE
Sbjct: 14  DVIKTIEENLAPVQPQNLQDACIYLTKAGGKMLRPALTLISCEAVGGNKEDALKTAAAIE 73

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH +SLIH     MD+  +RRG P+VH  +DE  AI+AG+ L + AFE+I S K +   
Sbjct: 74  LIHTFSLIH--DDIMDDDDMRRGMPSVHKVWDEPLAILAGDTLFSKAFEMIISSKEENAH 131

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGA 197
                  L+ T       +  GQ  D+  E    + E +   +   KTGAL+  A ++GA
Sbjct: 132 PEHVANALA-TVADACVKICEGQASDMSFEGDFDVKEAEYSEMIYKKTGALIAAATKAGA 190

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           IM  A + E   L  +G  +GI FQ+ DD LD    E+DL K
Sbjct: 191 IMGGADEKEVTALYEYGRMIGIAFQIQDDYLDVISDEKDLGK 232


>gi|261391792|emb|CAX49247.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
           synthase) [Neisseria meningitidis 8013]
 gi|325139150|gb|EGC61696.1| geranyltranstransferase [Neisseria meningitidis ES14902]
          Length = 298

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 118/237 (49%), Gaps = 8/237 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L       + +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----ENEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L    H    +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HIQYDE TA++ G
Sbjct: 59  ASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIQYDEATALLVG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           + L T AF+++S P         +   +L+               L    + + +  +  
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQ 178

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +KTGAL+  A   GA+   + S++    L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 179 MHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLGLAFQVIDDVLDCEADTA 235


>gi|315635861|ref|ZP_07891123.1| geranyltranstransferase [Arcobacter butzleri JV22]
 gi|315479840|gb|EFU70511.1| geranyltranstransferase [Arcobacter butzleri JV22]
          Length = 286

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 14/226 (6%)

Query: 20  LDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRV 75
            +D LL+     +T H    D L   ++    GGK+ R  L+              A+ V
Sbjct: 8   FEDYLLKNLPISKTFHPHFEDALADMLK---AGGKRFRPMLLLSVVKSNKSLLVSNAMSV 64

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E +H YSLIHDDLP+MDN  +RRG  T+H +YDEVTAI+ G+ L T AF +I++  
Sbjct: 65  ALGVEFLHTYSLIHDDLPAMDNSDLRRGFQTLHKKYDEVTAILVGDALNTEAFNLIANA- 123

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFAC 193
             L ++I+ +L+  L HN G+ GM+ GQ +D   E   I   Q+  +   KT  L+  + 
Sbjct: 124 -SLHNDIKVELIKCLAHNGGINGMIIGQAIDCHFEKQKIQLNQLEFLHIHKTARLIAASL 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           + GAI++      +E+L  FG +LG++FQ+ DD++D    EE+  K
Sbjct: 183 KMGAIISEYDLQTQEKLYNFGIDLGLLFQIQDDIIDETCTEEEAGK 228


>gi|56477995|ref|YP_159584.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
 gi|56314038|emb|CAI08683.1| Polyprenyl synthetase (EC 2.5.1.-), gene: ISPB OR NE1915
           [Aromatoleum aromaticum EbN1]
          Length = 322

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 15/234 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
              L + +  + + +D ++ + L      ++      + S       GGK++R  LV   
Sbjct: 3   TQQLYAPIATDMQAVDAVIRERLHSDVVLIRQVAEYIIHS-------GGKRLRPALVLFS 55

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A        +  ++ A +E IH  +L+HDD+  +D   +RRG  T +  +    +++ G+
Sbjct: 56  AGAMGYRGQSHHQLAAVVEFIHTATLLHDDV--VDESELRRGNKTANALFGNAASVLVGD 113

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L T AF+++         ++R   +L+   NI  +G +  Q+L+  +  +D      + 
Sbjct: 114 FLYTRAFQMMVGVG-----DMRVMQVLADATNIIAEGEVL-QLLNCHNADVDIEDYLRVI 167

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + KT  L   A   GAI+  A++ ++ ++  FG +LG  FQ+ DD+LD   D  
Sbjct: 168 RYKTAKLFEAATRLGAILGGANEEQERKVAAFGMHLGTAFQIIDDVLDYSSDEA 221


>gi|331684834|ref|ZP_08385426.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H299]
 gi|331078449|gb|EGI49655.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H299]
          Length = 323

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 113/226 (50%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +   T+++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNATSVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|213859721|ref|ZP_03385425.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 318

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219


>gi|332523011|ref|ZP_08399263.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314275|gb|EGJ27260.1| geranyltranstransferase [Streptococcus porcinus str. Jelinkova 176]
          Length = 289

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/228 (35%), Positives = 125/228 (54%), Gaps = 11/228 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69
              +I+  L     +  +      +++L++AIRY+   GGK+IR  L+ E    F+V   
Sbjct: 3   KVDKINQALTRFYQEKQA-----VSEQLIAAIRYSAESGGKRIRPLLLLELLEAFSVTLT 57

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            +   + AA+E IH  SLIHDDLP+MDN   RRG  T H ++DE TAI+AG+ L   AF 
Sbjct: 58  DSHYDIAAALEMIHTGSLIHDDLPAMDNDDYRRGCLTNHKKFDEATAILAGDSLFLDAFA 117

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +I+   T L  NI+  L+ SL+++ G  GM+GGQMLD++ E   +   ++  I   KTG 
Sbjct: 118 LIA--GTNLSANIKVDLIESLSNSSGTFGMVGGQMLDMKAEGQELTLAELQEIHSHKTGC 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+ +   + A +A   +     +   G+ +G  FQ+ DD+LD   D  
Sbjct: 176 LLAYPFWAAAKIAEVDEQILLEIYQAGQKVGHAFQVRDDILDVTADFA 223


>gi|260596184|ref|YP_003208755.1| octaprenyl-diphosphate synthase [Cronobacter turicensis z3032]
 gi|260215361|emb|CBA27367.1| Octaprenyl-diphosphate synthase [Cronobacter turicensis z3032]
          Length = 323

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYEGKAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     I+   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----IKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A AS+ ++  L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEESYMRVIYSKTARLFEAAAQCSGILAGASEAQERALQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219


>gi|315125809|ref|YP_004067812.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas sp. SM9913]
 gi|315014323|gb|ADT67661.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Pseudoalteromonas sp. SM9913]
          Length = 295

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 9/234 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            +  +++     +   L+    Q       + ++ +  A  Y+++ GGK++R FLV    
Sbjct: 2   SIKEQIKLAQDDVANTLNLYFEQ-----PLESDNTIKEATHYSVMNGGKRLRPFLVYTTG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +      + AAIECIH YSL+HDDLP+MD+  +RRG+PT HI Y E  AI+AG+ 
Sbjct: 57  KILGADKRDLDVLAAAIECIHSYSLVHDDLPAMDDDDLRRGRPTCHIVYGEAQAILAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
           L T AFE+I+    +     + +++ +L H  GLQGM+ GQ  DI   D+ I   ++  I
Sbjct: 117 LQTLAFELIAKHTFKCSTEAQLKMIAALAHASGLQGMVAGQGRDIAATDKVITVDELERI 176

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            K+KTGAL+  A   GA+ A + SQ   + L  FG  +G+ FQ+ DD+LD E D
Sbjct: 177 HKLKTGALINCAITLGALCAPNTSQQTLDNLSTFGYAIGLAFQVHDDILDVEGD 230


>gi|254191045|ref|ZP_04897550.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
 gi|254301703|ref|ZP_04969146.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
 gi|157811595|gb|EDO88765.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
 gi|157938718|gb|EDO94388.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
          Length = 362

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
           +   ++ +  LD +L      +       L +A+RYA+ GG K++R  L      L + +
Sbjct: 74  KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 128

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V A IE IH +SLI DDLP+MDN  +R G+ T+H QYD  TA++A +GL++ AF
Sbjct: 129 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 188

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186
             +S     L  ++R  LM  L  +IG  G+ GGQ +D+      +D T++  + +MKTG
Sbjct: 189 LALSEAPLPL--DVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTG 246

Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLDCEE 232
           AL+  A   G +       E       +  +GE LG+ +Q+ DD+LD   
Sbjct: 247 ALIRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTA 296


>gi|16762067|ref|NP_457684.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16766600|ref|NP_462215.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29143556|ref|NP_806898.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56415234|ref|YP_152309.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197364164|ref|YP_002143801.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205354206|ref|YP_002228007.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207858553|ref|YP_002245204.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213053033|ref|ZP_03345911.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426652|ref|ZP_03359402.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213646987|ref|ZP_03377040.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|238910099|ref|ZP_04653936.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825815|ref|ZP_06544983.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25314317|pir||AH0903 octaprenyl-diphosphate synthase [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16421862|gb|AAL22174.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16504370|emb|CAD07822.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139191|gb|AAO70758.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56129491|gb|AAV78997.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197095641|emb|CAR61209.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205273987|emb|CAR38993.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206710356|emb|CAR34714.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261248470|emb|CBG26307.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301159854|emb|CBW19373.1| octaprenyl-diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|322684901|gb|EFY80899.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323211311|gb|EFZ96155.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323224032|gb|EGA08325.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230319|gb|EGA14438.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323246927|gb|EGA30893.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254140|gb|EGA37960.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|332990163|gb|AEF09146.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 323

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219


>gi|309775474|ref|ZP_07670476.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916770|gb|EFP62508.1| geranyltranstransferase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 282

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/222 (34%), Positives = 117/222 (52%), Gaps = 10/222 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D        + +    R+  A++Y+L+ GGK++R  L+    + +         + AAIE
Sbjct: 5   DFEDYLTHCLDSVPASRVRDAMQYSLMAGGKRVRPKLLLAVLNAYAQEEAIGYPLAAAIE 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLIHDDLP+MDN  +RRG  T H++Y E  AI+AG+GLLTYAF    + KT    
Sbjct: 65  MIHTYSLIHDDLPAMDNDTLRRGMATCHVKYGEDVAILAGDGLLTYAFA--QAMKTACPA 122

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGA 197
           +   ++   L+   G  GM+ GQ+ D++ E    ID   +  I   KTG L+      GA
Sbjct: 123 DELVEICRLLSDYSGAGGMILGQIKDLEGEANPHIDLQSLQDIHFYKTGKLLTLPLLCGA 182

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++A   + +       G ++G+ FQ+ DD+LD     E+L K
Sbjct: 183 LLAGH-KADLPVWEMIGADIGLSFQIQDDILDVTSTVEELGK 223


>gi|33599305|ref|NP_886865.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50]
 gi|33575351|emb|CAE30814.1| octaprenyl-diphosphate synthase [Bordetella bronchiseptica RB50]
          Length = 321

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 114/234 (48%), Gaps = 16/234 (6%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   L + + ++ K +D ++ D L      ++T  +  + +       GGK++R  +V 
Sbjct: 1   MNLPELIAPIADDMKAVDAVIRDRLNSDVVLIRTIGDYIIGA-------GGKRMRPAMVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ 
Sbjct: 54  MVARALGYQGTHHQLLAAVVEFIHTATLLHDDV--VDESDLRRGRDTANAVFGNAASVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + +FE++        D++R   +LS    +  +G +  Q+L++ D  + + +   
Sbjct: 112 GDYLYSRSFEMMVEA-----DSMRIMQILSQATTVIAEGEVL-QLLNVHDPDVSQERYLQ 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A + GA++A AS  ++     +G ++G  FQL DD+LD   D
Sbjct: 166 VVRYKTAKLFEAAAQVGAVLAGASPEQETAAAAYGRHVGAAFQLVDDVLDYSGD 219


>gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110]
 gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110]
          Length = 305

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/235 (36%), Positives = 125/235 (53%), Gaps = 11/235 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             L S    +  R++  L          +       L  A+RYA+L GGK++R  LV   
Sbjct: 12  ARLASWSDPHLARVEAALSR-------WVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAA 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +     N   ALR   A E IH YSL+HDDLPSMDN  +RRGKPTVH+++ E  A++AG+
Sbjct: 65  SEAVGGNAAAALRAACATELIHAYSLVHDDLPSMDNDVLRRGKPTVHVKFGEADALLAGD 124

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L   AFE+++    ++  +I++ L   L    G QGM GGQ +D+      +DE Q+  
Sbjct: 125 ALQALAFELLTPEGDEIPASIQAALCRLLARAAGSQGMAGGQAIDLASVGLALDEAQLRE 184

Query: 180 IQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + ++KTGAL+  + E G A     +      LR +G  +G+ FQ+ DD+LD   D
Sbjct: 185 MHRLKTGALLQGSVEMGAACAGAVAPAALSALRDYGAAIGLAFQVVDDILDVTAD 239


>gi|16800468|ref|NP_470736.1| hypothetical protein lin1400 [Listeria innocua Clip11262]
 gi|16413873|emb|CAC96631.1| lin1400 [Listeria innocua Clip11262]
          Length = 293

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/222 (38%), Positives = 129/222 (58%), Gaps = 6/222 (2%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD+ L +  +    +   +L  ++ Y++  GGK+IR  LV       N+  +  L+  
Sbjct: 13  KVLDESLFKEINMRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNIEPMRGLKTA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E IH YSLIHDDLP+MD+   RRGK T H  Y + TAI+AG+ LLT AF I++  + 
Sbjct: 71  TALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTLAFSILAEDEN 130

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACE 194
            L    R  L+  ++++ G +GM+GGQ  D++ E   +   ++  I   KTG L+ FA  
Sbjct: 131 -LSFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKTGELLIFAVT 189

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           S A +A A+  + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 190 SAAKIAEATPEQTKRLRIFAENIGIGFQISDDILDVIGDETK 231


>gi|290790316|pdb|3LVS|A Chain A, Crystal Structure Of Farnesyl Diphosphate Synthase From
           Rhodobacter Capsulatus Sb1003
 gi|290790317|pdb|3LVS|B Chain B, Crystal Structure Of Farnesyl Diphosphate Synthase From
           Rhodobacter Capsulatus Sb1003
          Length = 298

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/232 (36%), Positives = 132/232 (56%), Gaps = 15/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              +L+E    ++T +       A+ +       L  A+ YA  GGK++R+FL  E A++
Sbjct: 4   FSERLKEIQDAVETAM-------AAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAI 56

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             ++   A+    A+E +H YSL+HDD+P MDN  +RRG PTVH ++D+ TA++AG+ L 
Sbjct: 57  HGISMAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQ 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           T AFE+ + P     +N R  L+ +L    G +GM+ GQ LDI  E     +   ++  +
Sbjct: 117 TLAFELCTDPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRL 175

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           Q  KTGAL+ FA ++GAI+A A    +  L  +   LG+ FQ+ADD+LD E 
Sbjct: 176 QAGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIADDILDVEG 224


>gi|213622139|ref|ZP_03374922.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 317

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 21  SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 80

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 81  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 133

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ 
Sbjct: 134 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 192

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 193 YGRYLGTAFQLIDDLLDYSAD 213


>gi|194099628|ref|YP_002002759.1| IspA [Neisseria gonorrhoeae NCCP11945]
 gi|239999827|ref|ZP_04719751.1| hypothetical protein Ngon3_10168 [Neisseria gonorrhoeae 35/02]
 gi|240017431|ref|ZP_04723971.1| hypothetical protein NgonFA_09768 [Neisseria gonorrhoeae FA6140]
 gi|240081573|ref|ZP_04726116.1| hypothetical protein NgonF_09730 [Neisseria gonorrhoeae FA19]
 gi|240118810|ref|ZP_04732872.1| hypothetical protein NgonPID_10204 [Neisseria gonorrhoeae PID1]
 gi|240124349|ref|ZP_04737305.1| hypothetical protein NgonP_10505 [Neisseria gonorrhoeae PID332]
 gi|240129023|ref|ZP_04741684.1| hypothetical protein NgonS_10439 [Neisseria gonorrhoeae SK-93-1035]
 gi|268595637|ref|ZP_06129804.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02]
 gi|268597669|ref|ZP_06131836.1| geranyltranstransferase [Neisseria gonorrhoeae FA19]
 gi|268604521|ref|ZP_06138688.1| geranyltranstransferase [Neisseria gonorrhoeae PID1]
 gi|268682976|ref|ZP_06149838.1| geranyltranstransferase [Neisseria gonorrhoeae PID332]
 gi|268687403|ref|ZP_06154265.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035]
 gi|193934918|gb|ACF30742.1| IspA [Neisseria gonorrhoeae NCCP11945]
 gi|268549026|gb|EEZ44444.1| geranyltranstransferase [Neisseria gonorrhoeae 35/02]
 gi|268551457|gb|EEZ46476.1| geranyltranstransferase [Neisseria gonorrhoeae FA19]
 gi|268588652|gb|EEZ53328.1| geranyltranstransferase [Neisseria gonorrhoeae PID1]
 gi|268623260|gb|EEZ55660.1| geranyltranstransferase [Neisseria gonorrhoeae PID332]
 gi|268627687|gb|EEZ60087.1| geranyltranstransferase [Neisseria gonorrhoeae SK-93-1035]
 gi|317165116|gb|ADV08657.1| IspA [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 298

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 8/237 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L         +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L         +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E TA++ G
Sbjct: 59  ASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           + L T AF+++S P         +   +L+               L    + + +  +  
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLER 178

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +KTGAL+  A   GA      S  E   L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235


>gi|319947470|ref|ZP_08021702.1| geranyltranstransferase [Streptococcus australis ATCC 700641]
 gi|319746410|gb|EFV98671.1| geranyltranstransferase [Streptococcus australis ATCC 700641]
          Length = 295

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 76/231 (32%), Positives = 120/231 (51%), Gaps = 12/231 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+E  + ++  ++        +   Q   RL+ +I Y++  GGK+IR  L+ E    F+ 
Sbjct: 3   LEEKLQGVEKEIEGF------YEAKQIAPRLVESILYSVRAGGKRIRPLLLLELLEAFHA 56

Query: 68  NH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                  +V AA+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L   
Sbjct: 57  PILEAHFQVAAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDSLFLD 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           AF  ++     L  +I+ QL+  L+   G  GM+ GQ+LD++ E   +   Q+ +I   K
Sbjct: 117 AFGCVAEA--DLPASIQVQLIALLSDASGTAGMVAGQVLDMEGEGASLTLDQLQVIHANK 174

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           TG L+ +  ++  I+          L   G +LG+ FQ+ DD+LD   D  
Sbjct: 175 TGRLLAYPFQAAGILLELEPAVATLLEEIGIHLGLAFQIRDDILDVTADFA 225


>gi|32490894|ref|NP_871148.1| hypothetical protein WGLp145 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166100|dbj|BAC24291.1| ispA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 300

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/242 (35%), Positives = 137/242 (56%), Gaps = 13/242 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L S L +    I+ IL   L     ++ ++ N  L  A++YALL GGK++R+FLV 
Sbjct: 1   MNNFLLS-LTKIQNHINLILKKYL-----NIFSKKNMNLTLAMKYALLNGGKRLRAFLVY 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + NV+      + A+IECIH YSLIHDDLPSMDN   RRG+ + H++++E  AI+A
Sbjct: 55  CIGKMLNVSSNNLDCIAASIECIHAYSLIHDDLPSMDNDRFRRGRESCHVKFNEYIAILA 114

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L + AF I+S+     +  N R +++  L++  G +GM  GQ LD++++   I   Q
Sbjct: 115 GDSLQSLAFNILSTVNMPDVSVNNRMKMISILSYASGAKGMCLGQSLDLENQGSLISIKQ 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I K KT  L+  A     + ++  ++     L  + +++G+ FQ+ DD+L+      
Sbjct: 175 LEEIYKYKTSFLIYAATRMTILSSNIKNKKILINLIKYSKSIGLAFQIQDDILNVIG--S 232

Query: 236 KK 237
           KK
Sbjct: 233 KK 234


>gi|317479594|ref|ZP_07938721.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
 gi|316904256|gb|EFV26083.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
          Length = 346

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 19/229 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  +RI++ + +L         T+    L + + Y L +GGK+IR  L+    +L+  + 
Sbjct: 28  ELLERINSHIAEL-------QFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDI 80

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                    IE  H Y+L+HDDL  MD    RRGK TVH  +D+  AI++G+ +L  A++
Sbjct: 81  TRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQ 138

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186
            ++    +    +          ++    +  GQ LD++ E   +    +   + ++KT 
Sbjct: 139 FMAQCPVEHLKEV------MDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTS 192

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L+  + + GA++  AS  + E+L  FG NLG+ FQL DD LD   D  
Sbjct: 193 VLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGDTA 241


>gi|114048295|ref|YP_738845.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7]
 gi|113889737|gb|ABI43788.1| farnesyl-diphosphate synthase [Shewanella sp. MR-7]
          Length = 293

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 138/238 (57%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L + ++E   R+    DD L Q  S ++     +L +A+ + ALLGGK+IR FLV     
Sbjct: 2   LVNAIKEYQLRV----DDQLKQRFSTLE-DTAAQLKAAMTHGALLGGKRIRPFLVYSVGQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V+        AAIECIH YSLIHDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L
Sbjct: 57  MFGVSLEKLDACAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AFEI++     +       ++ +L    G +GM GGQ +D    D+ ID   +  + 
Sbjct: 117 QTLAFEIVTEAVPGISSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKLIDLKALTQLH 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            MKTGAL+  A E   I A+A ++E + +  F   +G+ FQ+ DD+LD     E+L K
Sbjct: 177 NMKTGALISCAVELALIAANAPKDEYQTMMEFAHAVGLAFQVQDDILDIIATTEELGK 234


>gi|88607928|ref|YP_504938.1| geranyltranstransferase [Anaplasma phagocytophilum HZ]
 gi|88598991|gb|ABD44461.1| geranyltranstransferase [Anaplasma phagocytophilum HZ]
          Length = 280

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/234 (36%), Positives = 124/234 (52%), Gaps = 6/234 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   +  ++++ S  +   L  L+    +         L+ AI Y  L  GK +R+FL +
Sbjct: 2   MRCHIKERVKDFSNLVGKELTKLIETQVTGGPAAG---LVDAIGYCILPPGKCLRAFLAS 58

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A  F V+    L +  AIE +H YSL+HDDLPSMDN   RRGK + HI++ E  A++ 
Sbjct: 59  SVAQTFGVSIERTLPLCLAIEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLT 118

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LLT  FE++SS        ++  ++  ++   G +GM+ GQ LD+ +       V  
Sbjct: 119 GDALLTLTFELLSSMDESC--TVKCAIIRVISDACGHRGMVAGQALDMGNLEPSLEAVKQ 176

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I K+KT  L   ACESGAI+A  S   ++ L  +GE LG  FQ  DDL D  ED
Sbjct: 177 IHKLKTARLFSAACESGAILAEVSTANQQALASYGETLGCAFQAKDDLCDINED 230


>gi|89093477|ref|ZP_01166425.1| dimethylallyltransferase [Oceanospirillum sp. MED92]
 gi|89082167|gb|EAR61391.1| dimethylallyltransferase [Oceanospirillum sp. MED92]
          Length = 293

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 11/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            +  +L+    R+D  L++ L   +       +  L  ++RY+L  GGK++R  LV    
Sbjct: 2   EIRQQLKHYQSRVDNHLENCLPSESI------DPLLQESMRYSLFNGGKRVRPALVYLVN 55

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +       A    AAIECIH YSL+HDDLP+MD+  +RRGKPT HI YDE TAI+AG+ 
Sbjct: 56  QILGGTDEAADNAAAAIECIHSYSLVHDDLPAMDDDDLRRGKPTCHIAYDEATAILAGDA 115

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           L   AFE++++ + Q  D+ + +L+  L+   G  GM+ GQ  D++     +   Q+  +
Sbjct: 116 LQCLAFELLANDQQQSADS-KIKLIQLLSQASGHGGMVVGQSFDLRHVGKPLTLEQLEAM 174

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  A   GA      S+ + + L  +   +G+ FQ+ DD+LD E D  
Sbjct: 175 HQHKTGALLLCAVHMGAACGPRVSKEQLDALTRYALAIGLAFQVQDDILDIEGDSE 230


>gi|319957682|ref|YP_004168945.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511]
 gi|319420086|gb|ADV47196.1| farnesyl-diphosphate synthase [Nitratifractor salsuginis DSM 16511]
          Length = 294

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 121/216 (56%), Gaps = 5/216 (2%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAA 78
            ++ L Q    + T H D   +     L GGK+ R  L+      +      +A+    A
Sbjct: 4   FENFLTQNLPVVDTFHPDYNEALRAMVLAGGKRFRPRLLLGIVEAYAPLLVESAMTPALA 63

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E  H YSLIHDDLP+MD+  +RRG+PT+H ++DE  AI+AG+ L T+AFE++S  ++  
Sbjct: 64  LEIFHTYSLIHDDLPAMDDADLRRGEPTLHTRFDEALAILAGDALNTHAFEMLS--RSAF 121

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESG 196
           + ++R +L+  L  N G  GM+ GQ +D++ E   +   QV  +   KT  L+  A E G
Sbjct: 122 RADVRIELVRILAENGGSGGMVLGQAIDLEFEKSPLSLEQVVELHTNKTAKLIAAALEMG 181

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A++    +  +  L  FG +LG++FQ+ DD+LD  +
Sbjct: 182 AVIVDLPKETRRALYRFGIDLGLLFQVQDDILDATQ 217


>gi|322834065|ref|YP_004214092.1| Polyprenyl synthetase [Rahnella sp. Y9602]
 gi|321169266|gb|ADW74965.1| Polyprenyl synthetase [Rahnella sp. Y9602]
          Length = 309

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/243 (34%), Positives = 130/243 (53%), Gaps = 13/243 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
            G   +L+   +R+D +L   +           +  L+ A+RY ALLGGK++R +LV   
Sbjct: 11  DGFTHELRAMQQRVDEVLTAYISAL-----PLADLPLVEAMRYGALLGGKRLRPYLVYAS 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LF+++        AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI++G+
Sbjct: 66  GQLFSLDLKNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILSGD 125

Query: 122 GLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
            L T AF I++  +   +    R  ++  L    G  GM GGQ LD+  E   +    + 
Sbjct: 126 ALQTLAFSILADSEMPDVAVKDRLAMISELALASGSSGMCGGQALDLAAEGQQVGLDALE 185

Query: 179 MIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED---L 234
            I + KTGAL+  A   GA+ A  +       L  + + +G+ FQ+ DD+LD   D   L
Sbjct: 186 QIHRHKTGALIRAAVRMGALAAGETGRAVLPILDNYAQAIGLAFQVQDDILDVVGDTATL 245

Query: 235 PKK 237
            K+
Sbjct: 246 GKR 248


>gi|308184713|ref|YP_003928846.1| geranyltranstransferase [Helicobacter pylori SJM180]
 gi|308060633|gb|ADO02529.1| geranyltranstransferase [Helicobacter pylori SJM180]
          Length = 303

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--LLESHIIVELIKILSVNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|166711441|ref|ZP_02242648.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 291

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 1/209 (0%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+ A    T+   RL +A+R+A+LGG K++R  LV    +LF            A+E IH
Sbjct: 17  LEAALPSATRAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     +  + 
Sbjct: 77  AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAELRVG 136

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               L+               +D   +      +  +  +KTGAL+  +   GA+   A+
Sbjct: 137 WMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTGGAA 196

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 197 TADQQRLDEFADALGLAFQVRDDILDVES 225


>gi|253995893|ref|YP_003047957.1| trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8]
 gi|253982572|gb|ACT47430.1| Trans-hexaprenyltranstransferase [Methylotenera mobilis JLW8]
          Length = 322

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A LF        ++ A +E IH  +L+HDD+  +D    RRG+ T +
Sbjct: 43  GGKRLRPMLVLLAAGLFGEIQTQHHQLAAVVEFIHTATLLHDDV--VDESSKRRGQSTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + + AF+++ + +     N+R   +LS   N+  +G +  Q+L++ 
Sbjct: 101 ALFGNAASVLVGDFVYSRAFQMMVAVQ-----NMRVMEVLSNATNVIAEGEVL-QLLNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I +     +   KT  L   A   GAI++ AS  ++  L  +G +LG  FQL DD+L
Sbjct: 155 NADISDKAYLQVIHYKTAKLFEAATRLGAIISEASAKDEAALTAYGMHLGTAFQLIDDIL 214

Query: 229 DCEE---DLPK 236
           D      D+ K
Sbjct: 215 DLSGNSEDIGK 225


>gi|315586874|gb|ADU41255.1| geranyltranstransferase [Helicobacter pylori 35A]
          Length = 303

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 75/231 (32%), Positives = 124/231 (53%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67
           KR ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  KRFESFLNHHHL----HLESFHPYLKKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSN--SLLESHIIVELIKILSTNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|251790664|ref|YP_003005385.1| geranyltranstransferase [Dickeya zeae Ech1591]
 gi|247539285|gb|ACT07906.1| Polyprenyl synthetase [Dickeya zeae Ech1591]
          Length = 303

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 86/239 (35%), Positives = 128/239 (53%), Gaps = 9/239 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L  +L  + +RID  L   +    S +  Q +  + +    ALLGGK++R FLV  
Sbjct: 1   MTDFLK-QLAAHHQRIDAALSHFI----SALPFQSSPLVAAMAHGALLGGKRLRPFLVYS 55

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              LF +   +     AA+ECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+AG
Sbjct: 56  TGRLFAIAQDSLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHVRFGEDKAILAG 115

Query: 121 NGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQV 177
           + L T AF I++  P   + D  R  ++  L    G+ GM GGQ LD++ E +  D   +
Sbjct: 116 DALQTLAFSILADAPMPGVSDRDRLAMISELARASGVAGMCGGQALDLEAEGLQVDLQTL 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             I + KTGAL+  +   GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 176 ERIHRHKTGALIRASVRLGALAAGERGRLALPCLDRYADAIGLAFQVQDDILDVIGDSA 234


>gi|170717621|ref|YP_001784702.1| polyprenyl synthetase [Haemophilus somnus 2336]
 gi|168825750|gb|ACA31121.1| Polyprenyl synthetase [Haemophilus somnus 2336]
          Length = 296

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 11/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
               LQE+ +RI+       L+            L  A++Y  LLGGK+IR FLV     
Sbjct: 4   FAQDLQESKQRIN-----FFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGK 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   N +      AAIE IH YSLIHDDLP+MDN  +RRG PT HI +D  TAI+AG+ L
Sbjct: 59  MLGANLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
             +AFE+++     L    +  L+ +L +  G++GM  GQ LD+  E   I+ + +  I 
Sbjct: 119 QPFAFELLTQ-TPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIH 177

Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KTGAL+  A + G I +   A+   +E+L  +   +G+ FQ+ DD+LD E +
Sbjct: 178 RNKTGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGE 231


>gi|58582922|ref|YP_201938.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|58427516|gb|AAW76553.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
           oryzae pv. oryzae KACC10331]
          Length = 291

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 1/212 (0%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +  L+      T    RL +A+R+A+LGG K++R  LV    +LF            A+E
Sbjct: 14  ERNLEAGLPSATCAPHRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVE 73

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     + 
Sbjct: 74  LIHTYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAEL 133

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            +     L+               +D   +      +  +  +KTGAL+  +   GA+  
Sbjct: 134 RVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTG 193

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A+  +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 194 GAATADQQRLDEFADALGLAFQVRDDILDVES 225


>gi|4633648|gb|AAD26851.1| geranylgeranyl diphosphate synthase [Archaeoglobus fulgidus]
          Length = 317

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 17/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  ++ + ++ I+  +++LL +       +    L  A R+ +  GGK++R  +      
Sbjct: 2   LKEEIAKRAEIINKAIEELLPE-------REPIGLYKAARHLIKAGGKRLRPVISLLAVE 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               ++   +    +IE IH ++L+HDD+  MD   +RRG PTVH  Y E TAI+AG+ L
Sbjct: 55  ALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVHRVYGEATAILAGDTL 112

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMI 180
              AF++++    + +   ++  MLS         +  GQ  D+  E  +         +
Sbjct: 113 FAEAFKLLTKCDVESEGIRKATEMLSDV----CIKICEGQYYDMSFEKKESVSEEEYLRM 168

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            ++KTG L+  +    A++   S+   + L  +G   GI FQ+ DDLLD  E+  K
Sbjct: 169 VELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQDDLLDLTEETGK 224


>gi|317177716|dbj|BAJ55505.1| geranyltranstransferase [Helicobacter pylori F16]
          Length = 303

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ+LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMVLGQVLDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|332673768|gb|AEE70585.1| geranyltranstransferase [Helicobacter pylori 83]
          Length = 303

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 74/229 (32%), Positives = 123/229 (53%), Gaps = 15/229 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++   IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALGIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
             L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D
Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQD 236


>gi|293392228|ref|ZP_06636562.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952762|gb|EFE02881.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 296

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 125/232 (53%), Gaps = 7/232 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
             ++ + +   ++  L +  +H+ +     L  A++Y  LLGGK+IR FLV     +   
Sbjct: 4   FSQDLQHVQQRINQFLAKQFAHIDSASAP-LAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AAIE IH YSLIHDDLP+MD+  +RRG  T HI +DE TAI+AG+ L T A
Sbjct: 63  DMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FEI++     L    +  L+ +L+   G++GM  GQ LD+  E   I   ++  I   KT
Sbjct: 123 FEILTDI-PHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKT 181

Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A + G I +   A     ++L  +   +G+ FQ+ DD+LD E D  
Sbjct: 182 GALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSA 233


>gi|188990958|ref|YP_001902968.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167732718|emb|CAP50912.1| geranyltranstransferase [Xanthomonas campestris pv. campestris]
          Length = 291

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 115/233 (49%), Gaps = 9/233 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M+  L    +    R +  LD  L   A         RL +A+R+A+LGG K++R  LV 
Sbjct: 1   MSAAL---FERWLARTERQLDACLPSPALA-----PQRLHAAMRHAVLGGGKRMRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LF     +      A+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+A
Sbjct: 53  ASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGRPTVHIAFDEATAILA 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   AFE+++         +     L+               +D   +      +  
Sbjct: 113 GDALQARAFELLAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALDALQR 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +KTGAL+  A   G +   A   +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 173 MHALKTGALIRAAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVES 225


>gi|50119637|ref|YP_048804.1| octaprenyl diphosphate synthase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49610163|emb|CAG73603.1| octaprenyl-diphosphate synthase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 323

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     N    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALAYNGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|261820112|ref|YP_003258218.1| octaprenyl diphosphate synthase [Pectobacterium wasabiae WPP163]
 gi|261604125|gb|ACX86611.1| Trans-hexaprenyltranstransferase [Pectobacterium wasabiae WPP163]
          Length = 323

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     +    + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALAYDGDKHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S +I+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSSILAGATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|116052080|ref|YP_789076.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254242726|ref|ZP_04936048.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
 gi|313109486|ref|ZP_07795442.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
 gi|115587301|gb|ABJ13316.1| geranyltranstransferase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126196104|gb|EAZ60167.1| geranyltranstransferase [Pseudomonas aeruginosa 2192]
 gi|310881944|gb|EFQ40538.1| geranyltranstransferase [Pseudomonas aeruginosa 39016]
          Length = 295

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +       R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L      
Sbjct: 2   IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL
Sbjct: 57  ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
              AFE+++  +   +++     ML+      G  GM+GGQ +D+      +D+  + ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  +   GA+ +  A       L  + E +G+ FQ+ DD+LD E D  
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPAALAALERYAEAIGLAFQVQDDILDVESDTA 232


>gi|307129369|ref|YP_003881385.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937]
 gi|306526898|gb|ADM96828.1| octaprenyl diphosphate synthase [Dickeya dadantii 3937]
          Length = 323

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLTARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI++ AS  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQASAILSGASSEQELALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|317014338|gb|ADU81774.1| geranyltranstransferase [Helicobacter pylori Gambia94/24]
          Length = 303

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71
              +  L     H++  H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHHLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYLNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+  I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--LLESRIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +    +   + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238


>gi|261867966|ref|YP_003255888.1| geranyltranstransferase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413298|gb|ACX82669.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 296

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 125/232 (53%), Gaps = 7/232 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
             ++ + +   ++  L +  +H+ +     L  A++Y  LLGGK+IR FLV     +   
Sbjct: 4   FSQDLQHVQQRINHFLAKQFAHIDSA-PAPLAEAMKYGLLLGGKRIRPFLVYATGKMLGA 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AAIE IH YSLIHDDLP+MD+  +RRG  T HI +DE TAI+AG+ L T A
Sbjct: 63  DMAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHQTCHIAFDEATAILAGDALQTLA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FEI++     L    +  L+ +L+   G++GM  GQ LD+  E   I   ++  I   KT
Sbjct: 123 FEILTDI-PHLSAEQKLMLIKTLSAAAGVKGMCLGQSLDLISEQKIISLQELEQIHLNKT 181

Query: 186 GALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A + G I +   A     ++L  +   +G+ FQ+ DD+LD E D  
Sbjct: 182 GALLTAALKMGFICSPHFADAALAQQLERYATAIGLAFQVQDDILDIEGDSA 233


>gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
 gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
          Length = 296

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 11/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
               LQE+ +RI+       L+            L  A++Y  LLGGK+IR FLV     
Sbjct: 4   FAQDLQESKQRIN-----FFLEKQFECIDSSPSPLAEAMKYGLLLGGKRIRPFLVYATGK 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   N +      AAIE IH YSLIHDDLP+MDN  +RRG PT HI +D  TAI+AG+ L
Sbjct: 59  MLGANLIQLDYAAAAIEAIHAYSLIHDDLPAMDNDSLRRGHPTCHIAFDHATAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
             +AFE+++     L    +  L+ +L +  G++GM  GQ LD+  E   I+ + +  I 
Sbjct: 119 QPFAFELLTQ-TPDLSAEQKLALVQTLANASGVKGMCLGQSLDLISENQQINLSALEKIH 177

Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KTGAL+  A + G I +   A+   +E+L  +   +G+ FQ+ DD+LD E +
Sbjct: 178 RNKTGALLSAAVKMGFICSPHFANIKLEEQLMHYSSAVGLAFQVQDDILDIEGE 231


>gi|89052978|ref|YP_508429.1| trans-hexaprenyltranstransferase [Jannaschia sp. CCS1]
 gi|88862527|gb|ABD53404.1| Trans-hexaprenyltranstransferase [Jannaschia sp. CCS1]
          Length = 335

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 16/228 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             L + L+++   ++T++        + M ++H  R+     + +  GGK+IR  L   C
Sbjct: 12  DRLSAALKDDLTAVNTLI-------RARMASKHAPRIPEVTAHLVEAGGKRIRPMLTLAC 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L   +    +++ A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+
Sbjct: 65  ARLCGYSGDDHVKLAATVEFIHTATLLHDDV--VDESEQRRGRPTANLLWDNQSSVLVGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   AF+++  P      N+R   +LS       +G +  Q+    +    E     + 
Sbjct: 123 YLFARAFQLMVEPG-----NLRVLDILSNAAATIAEGEVL-QLTVASNIETPEETYLQVI 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + KT AL   ACE G ++A       + L  +G+ LG+ FQ+ADDLLD
Sbjct: 177 RGKTAALFEAACEVGGVIAGRDTFIIQALATYGDGLGVAFQMADDLLD 224


>gi|325294094|ref|YP_004279958.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium
           sp. H13-3]
 gi|325061947|gb|ADY65638.1| geranyltranstransferase/farnesyl-diphosphatesynthase [Agrobacterium
           sp. H13-3]
          Length = 324

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 112/235 (47%), Positives = 158/235 (67%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              +KL++N+ + +++L  LL   A   +      LL A+R+  L GGK++R FLV E  
Sbjct: 27  NFETKLRDNAAQTESLLGRLLSAEARADEITRPQNLLDAMRHGVLNGGKRLRPFLVIEST 86

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L   N   A  VGAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVH ++DE TAI+AG+ 
Sbjct: 87  ALLGGNAEAAHHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDS 146

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
           LLT AF+II+S +  L+ + ++ L+LSL    G+ GM GGQ LD+  E    DE  +  +
Sbjct: 147 LLTLAFDIIASDENPLEADRKAALVLSLARAAGIGGMAGGQALDLAAEKNAPDEAGIITL 206

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A +  +E++RLR FGE +G+ FQLADDLLD   D  
Sbjct: 207 QAMKTGALLRFACEAGAIIAGSDVSERQRLRLFGEKIGLAFQLADDLLDLTADAA 261


>gi|270290381|ref|ZP_06196606.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4]
 gi|270281162|gb|EFA26995.1| farnesyl-diphosphate synthase [Pediococcus acidilactici 7_4]
          Length = 294

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN      ++ ++  I+    +L+ +   H       +L   + Y+   GGK++R  ++ 
Sbjct: 1   MNKEFNEFVRRSTPLINDHFAELMEKVEKH-----QPQLARMMAYSFNAGGKRVRPLILL 55

Query: 60  ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               +     +   L V  A+E +H YSLIHDDLP+MDN  +RRG+PT H Q+ E  AI+
Sbjct: 56  AILEVLGEPINPDVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAIL 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
            G+ LLT AF+ +++  T     +++ ++  L    G +GM+ GQ+ DI+   +     Q
Sbjct: 116 TGDALLTIAFQWLAA--TGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQ 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  + ++KTG ++ F  ++   +A         +  F +N G+ FQ+ DD++D  E   +
Sbjct: 174 LKKLHELKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTESSVE 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|317012738|gb|ADU83346.1| geranyltranstransferase IspA [Helicobacter pylori Lithuania75]
          Length = 303

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 75/231 (32%), Positives = 121/231 (52%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67
           +R ++ L +  L    H+++ H     +     L GGK+ R  L      SL        
Sbjct: 14  ERFESFLKNHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNATLRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+    L+  I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSNA--LLESPIIVELVKILSTNGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +     E  + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVASGIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238


>gi|294678977|ref|YP_003579592.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003]
 gi|293372070|gb|ADE44162.1| farnesyl diphosphate synthase [Rhodobacter capsulatus]
 gi|294477797|gb|ADE87185.1| geranyltranstransferase [Rhodobacter capsulatus SB 1003]
          Length = 288

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 85/232 (36%), Positives = 132/232 (56%), Gaps = 15/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              +L+E    ++T +       A+ +       L  A+ YA  GGK++R+FL  E A++
Sbjct: 2   FSERLKEIQDAVETAM-------AAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAI 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             ++   A+    A+E +H YSL+HDD+P MDN  +RRG PTVH ++D+ TA++AG+ L 
Sbjct: 55  HGISMAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQ 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           T AFE+ + P     +N R  L+ +L    G +GM+ GQ LDI  E     +   ++  +
Sbjct: 115 TLAFELCTDPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRL 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           Q  KTGAL+ FA ++GAI+A A    +  L  +   LG+ FQ+ADD+LD E 
Sbjct: 174 QAGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIADDILDVEG 222


>gi|21243489|ref|NP_643071.1| farnesyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21109048|gb|AAM37607.1| geranyltranstransferase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 291

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 1/209 (0%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+      T    RL +A+R+A+LGG K++R  LV    +LF            A+E IH
Sbjct: 17  LEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     +  + 
Sbjct: 77  AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAELRVG 136

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               L+               +D   +      +  +  +KTGAL+  A   GA+   A+
Sbjct: 137 WMQSLATAAGAAGMCGGQALDIDATGQLQSLQHLQRMHALKTGALIRAAVRMGALTGGAA 196

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 197 LADQQRLDEFADALGLAFQVRDDILDVES 225


>gi|59802056|ref|YP_208768.1| hypothetical protein NGO1735 [Neisseria gonorrhoeae FA 1090]
 gi|240014983|ref|ZP_04721896.1| hypothetical protein NgonD_10150 [Neisseria gonorrhoeae DGI18]
 gi|240116586|ref|ZP_04730648.1| hypothetical protein NgonPID1_10193 [Neisseria gonorrhoeae PID18]
 gi|240122052|ref|ZP_04735014.1| hypothetical protein NgonPI_09860 [Neisseria gonorrhoeae PID24-1]
 gi|260439653|ref|ZP_05793469.1| hypothetical protein NgonDG_00928 [Neisseria gonorrhoeae DGI2]
 gi|268602255|ref|ZP_06136422.1| geranyltranstransferase [Neisseria gonorrhoeae PID18]
 gi|291042894|ref|ZP_06568635.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2]
 gi|293398096|ref|ZP_06642301.1| geranyltranstransferase [Neisseria gonorrhoeae F62]
 gi|59718951|gb|AAW90356.1| putative geranyltranstransferase [Neisseria gonorrhoeae FA 1090]
 gi|268586386|gb|EEZ51062.1| geranyltranstransferase [Neisseria gonorrhoeae PID18]
 gi|291013328|gb|EFE05294.1| geranyltranstransferase [Neisseria gonorrhoeae DGI2]
 gi|291611359|gb|EFF40429.1| geranyltranstransferase [Neisseria gonorrhoeae F62]
          Length = 298

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 8/237 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +  Q    + + +L+  L         +    L  A+RYA L GGK++R  LV  
Sbjct: 4   TNDLKAWQQRAQAQTELLLERFLPS-----GNEIPHTLHEAMRYAALDGGKRLRPMLVLA 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + L         +  AAIE IH YSL+HDD+P+MDN  +RRGKPT HI+Y E TA++ G
Sbjct: 59  ASELGGAMADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHIKYGEATALLTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           + L T AF+++S P         +   +L+               L    + + +  +  
Sbjct: 119 DALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLER 178

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +KTGAL+  A   GA      S  E   L  +   LG+ FQ+ DD+LDCE D  
Sbjct: 179 MHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLGLAFQVIDDVLDCEADTA 235


>gi|261346381|ref|ZP_05974025.1| geranyltranstransferase [Providencia rustigianii DSM 4541]
 gi|282565699|gb|EFB71234.1| geranyltranstransferase [Providencia rustigianii DSM 4541]
          Length = 305

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 6/240 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M+           ++    ++  LL +   +       L  A++Y  LLGGK++R FL  
Sbjct: 1   MSEQHQDAFAHQQRQAHDRVNQYLLNSLETLPFADLP-LAQAMKYGTLLGGKRLRPFLTY 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  V+        AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  A++A
Sbjct: 60  AVGEMLGVSQDNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAVLA 119

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQ 176
           G+ L T+AF+++SS    ++ D  R  ++  L +  GL GM GGQ   LD + + +D   
Sbjct: 120 GDALQTFAFQLLSSAAMPEVSDKDRIAMISELAYASGLAGMCGGQALDLDAEGKRVDLAA 179

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  I + KTGAL+  A   GA  A     +    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 180 LERIHQHKTGALIRAAIRLGAYAAGEKGRQSIAILDQYANAIGLAFQVQDDILDVIGDSE 239


>gi|298372651|ref|ZP_06982641.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275555|gb|EFI17106.1| polyprenyl synthetase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 318

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 18/225 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++ + +   H+       L   I Y L  GGK++R  LV     +F  +  T      A
Sbjct: 5   IENSIRRIDWHIDPVS---LYKPIEYTLDSGGKRLRPMLVAIACEMFGKSSETVENAAVA 61

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE  H ++L+HDDL  MD+   RR KPTVH++++  TAI++G+ +L  A+E ++    + 
Sbjct: 62  IEIFHNFTLLHDDL--MDDSPTRRNKPTVHVKWNANTAILSGDAMLIKAYEFLAKIPEKY 119

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACES 195
              +                +  GQ  D+  E    +   + F + ++KT  L+  + ++
Sbjct: 120 WAKVL------PVFTQTALEVCEGQQFDMDFETKDNVTIDEYFRMIRLKTAVLLACSLKT 173

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           GAI+A AS+ ++  +   G  +G+ FQL DD LD       L K+
Sbjct: 174 GAIIADASERDQRLIYDLGIAIGMAFQLKDDYLDTYGTFETLGKR 218


>gi|304384740|ref|ZP_07367086.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284]
 gi|304328934|gb|EFL96154.1| geranyltranstransferase [Pediococcus acidilactici DSM 20284]
          Length = 297

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN      ++ ++  I+    +L+ +   H       +L   + Y+   GGK++R  ++ 
Sbjct: 4   MNKEFNEFVRRSTPLINDHFAELMEKVEKH-----QPQLARMMAYSFNAGGKRVRPLILL 58

Query: 60  ECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               +     +   L V  A+E +H YSLIHDDLP+MDN  +RRG+PT H Q+ E  AI+
Sbjct: 59  AILEVLGEPINPDVLTVAVALEAVHTYSLIHDDLPAMDNDDLRRGRPTSHKQFGEAEAIL 118

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
            G+ LLT AF+ +++  T     +++ ++  L    G +GM+ GQ+ DI+   +     Q
Sbjct: 119 TGDALLTIAFQWLAA--TGFTAEVKATVIGDLAQAAGPEGMIAGQLQDIEGNHQRYTIEQ 176

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
           +  + ++KTG ++ F  ++   +A         +  F +N G+ FQ+ DD++D  E   +
Sbjct: 177 LKKLHELKTGQMLIFPAKAALHIAKCETTVATAILRFVQNFGLAFQIHDDIIDVTESSVE 236

Query: 234 LPK 236
           L K
Sbjct: 237 LGK 239


>gi|238918407|ref|YP_002931921.1| hypothetical protein NT01EI_0448 [Edwardsiella ictaluri 93-146]
 gi|238867975|gb|ACR67686.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 323

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          L + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAARTLGYQGDHHLTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRILALMSEATNVIAEGEV-QQLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +  AI+A A   +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADPAQEQALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
 gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
          Length = 302

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
                  +  +R +  L  +L   A         RL  A+RYA+LGG K++R  L     
Sbjct: 9   SFSEWTAQIQQRTEVALAGVLPDAAIA-----PHRLHEAMRYAVLGGGKRVRPLLAHAAG 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L         R+  A+E IH YSL+HDDLP MD+  +RRGKPTVH+++DE TA++AG+ 
Sbjct: 64  ALAGAAAEDLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEFDEATALLAGDA 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L T AF++++          +  ++  L    G +GM GGQ +D+    + +   ++  +
Sbjct: 124 LQTLAFQVLAERPLGTDPANQLAMLNQLAIASGSRGMAGGQAIDLASVGKRLGREELEFM 183

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KTGAL+  A   GA        +E  RL  + + +G++FQ+ DDLLD E D  
Sbjct: 184 HIHKTGALIRAAVLLGARAGGTLGADEHARLDHYAKVVGLLFQVVDDLLDAEADTA 239


>gi|94311552|ref|YP_584762.1| farnesyl-diphosphate synthase [Cupriavidus metallidurans CH34]
 gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
          Length = 294

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 75/236 (31%), Positives = 119/236 (50%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
               + ++    R +  L+  L  T +   T     L  A+RYA+LGG K++R  LV   
Sbjct: 2   SDFATWMRAQGARTEAALEAALPSTDTIPYT-----LHEAMRYAVLGGGKRVRPLLVHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +             A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GEVVGATPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
            L + AF +++     L    R +++  L    G  GM GGQ +D+Q+  + +    +  
Sbjct: 117 ALQSQAFIVLAQTPA-LAAEARLKVVAELAVASGSIGMCGGQAIDLQNVGKAMTREALEG 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+  +  Q     L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTA 231


>gi|323966367|gb|EGB61801.1| polyprenyl synthetase [Escherichia coli M863]
 gi|327251278|gb|EGE62967.1| polyprenyl synthetase family protein [Escherichia coli STEC_7v]
          Length = 323

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  S  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCSPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|238787578|ref|ZP_04631376.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641]
 gi|238724365|gb|EEQ16007.1| Octaprenyl-diphosphate synthase [Yersinia frederiksenii ATCC 33641]
          Length = 323

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   +++   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMAAATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|237706062|ref|ZP_04536543.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia
           sp. 3_2_53FAA]
 gi|226899102|gb|EEH85361.1| LOW QUALITY PROTEIN: octaprenyl diphosphate synthase [Escherichia
           sp. 3_2_53FAA]
          Length = 340

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 19  NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 78

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 79  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 136

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 137 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 190

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 191 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 236


>gi|239827501|ref|YP_002950125.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           WCH70]
 gi|239807794|gb|ACS24859.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           WCH70]
          Length = 320

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 8/229 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     ++T L  +  +    +Q+ ++    +A+     GGK+IR   V   A     
Sbjct: 2   KLKAMYSFLNTDLRAVEKELEKTVQSDYSQLSEAALHLLQAGGKRIRPVFVLLAAKFGTY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V  A+E IH  SL+HDD+  +D+  +RRG+ T+  +++   A+  G+ +   +
Sbjct: 62  DIERIKHVAVALELIHMASLVHDDV--IDDAELRRGRKTIKAKWNNRFAMYTGDYMFARS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++  +  L   I +  ++ +            Q+ D      +        K KT  
Sbjct: 120 LEQMARLENPLAHRILANTIVEVCRGEI------EQIKDKYRFDQNLRCYLRRIKRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  +C+ GAI A+A+++  ERL  FG  +G+ FQ+ DD+LD      K
Sbjct: 174 LIAASCQLGAIAANAAKDVAERLYLFGYYVGMSFQITDDILDFTGTEAK 222


>gi|162448166|ref|YP_001621298.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A]
 gi|161986273|gb|ABX81922.1| geranyltranstransferase [Acholeplasma laidlawii PG-8A]
          Length = 278

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 9/217 (4%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           +  ++++T    +L +A+ YALLGG K+IR  L         V+    +    A+E IH 
Sbjct: 7   RLKAYIETLPESKLKAAMAYALLGGGKRIRPMLGMTLLESKGVDPTPYIEAFLAVEMIHT 66

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           YSLIHDDLP+MD+  +RRGKPTVHI +DE  AI+AG+ LLT +F +++     L    + 
Sbjct: 67  YSLIHDDLPAMDDDTLRRGKPTVHIAFDEAIAILAGDALLTDSFRLVTQ-NKYLSTLQKV 125

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           +++  ++   G  GM+ GQ+ DI+ E   +    + ++ ++KT  L+  +     ++   
Sbjct: 126 EIIDIISSKAGSTGMVFGQIKDIESEDKMVTIEDLNLMYELKTANLIQASLMIAGVI--L 183

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           S ++ +     G  +G+IFQ+ DD+L+     E+  K
Sbjct: 184 SDHDIKSYEDLGYYIGLIFQIQDDILEYTLSPEEFGK 220


>gi|21232031|ref|NP_637948.1| farnesyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767842|ref|YP_242604.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|21113769|gb|AAM41872.1| geranyltranstransferase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66573174|gb|AAY48584.1| geranyltranstransferase; farnesyl-diphosphate synthase [Xanthomonas
           campestris pv. campestris str. 8004]
          Length = 291

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 9/233 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M+  L    +    R +  LD  L   A         RL +A+R+A+LGG K++R  LV 
Sbjct: 1   MSAAL---FERWVARTERQLDACLPSPALA-----PQRLHAAMRHAVLGGGKRMRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LF     +      A+E IH YSL+HDDLP+MD+  +RRG PTVHI +DE TAI+A
Sbjct: 53  ASGALFGAEEGSLDAPAVAVELIHAYSLVHDDLPAMDDDALRRGHPTVHIAFDEATAILA 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   AFE+++         +     L+               +D   +      +  
Sbjct: 113 GDALQARAFELLAEAPADAALRVGWLQSLASAAGAAGMCGGQALDIDATGQVQALEALQR 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +KTGAL+  A   G +   A   +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 173 MHALKTGALIRAAVRMGVLTGGAGIADQQRLDAFADALGLAFQVRDDILDVES 225


>gi|116872794|ref|YP_849575.1| geranyltranstransferase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741672|emb|CAK20796.1| geranyltranstransferase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 293

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 6/228 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
                  +LD+ L +       +   +L  ++ Y++  GGK+IR  LV       N + +
Sbjct: 7   FLAHYKKVLDESLYKEIKKRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNKDPM 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L+   A+E IH YSLIHDDLP+MD+   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  IGLKTATALEMIHTYSLIHDDLPAMDDDDYRRGKKTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGAL 188
           ++  +  L    R  L+  ++++ G +GM+GGQ  DI+ E   +   ++  I   KTG L
Sbjct: 125 VAEDEN-LSFETRIALINQISYSSGAEGMVGGQQADIEAENKQVTLEELSSIHARKTGEL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + FA  S A +A A+  + +RLR F EN+G+ FQ++DD+LD   D  K
Sbjct: 184 LIFAVTSAAKIAEANSEQTKRLRIFAENIGVGFQISDDILDVIGDETK 231


>gi|269137746|ref|YP_003294446.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202]
 gi|267983406|gb|ACY83235.1| octaprenyl diphosphate synthase [Edwardsiella tarda EIB202]
 gi|304557803|gb|ADM40467.1| Octaprenyl-diphosphate synthase [Edwardsiella tarda FL6-60]
          Length = 323

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALGYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRILALMSEATNVIAEGEV-QQLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +  AI+A A   +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADTAQEQALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|326790848|ref|YP_004308669.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
 gi|326541612|gb|ADZ83471.1| Farnesyltranstransferase [Clostridium lentocellum DSM 5427]
          Length = 291

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +     + +K++   L+ +    A   +      L  A+ Y+LL GGK+IR  L+     
Sbjct: 1   MAKTFSDYAKQVSEKLEHVFPTIAGPFEN-----LYKAMNYSLLAGGKRIRPVLMQLAYE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                          IE IH YSLIHDDLP+MD+   RRGK T H  + E TAI+AG+ L
Sbjct: 56  AVGGKAE-IDAYLCGIEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVFGEATAILAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           L  AF ++     +     + + +  L+   G  GM+GGQ+LD++ E   ID+  + +I 
Sbjct: 115 LNDAFCLMLEDALKSDSMEKVRAIHVLSMASGSAGMIGGQILDMESENKAIDQDTLDLIH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             KTGAL+  A + GAI+   S  E   L  +G+ +G +FQ+ DD+LD     E+L K
Sbjct: 175 LNKTGALISAATKMGAILGGGSPREVSLLEAYGKYIGKVFQIVDDILDQTSTIEELGK 232


>gi|227537499|ref|ZP_03967548.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227242636|gb|EEI92651.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 325

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 13/210 (6%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYS 86
           S +  Q    +   IRY L L GK++R  L    A LF   +    +    AIE  H +S
Sbjct: 17  SAVFPQEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFS 76

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           LIHDD+  MD   +RRG+ TVH ++++  AI++G+GLL  A+E ++    +   ++ +  
Sbjct: 77  LIHDDI--MDKAPLRRGQLTVHEKWNDSVAILSGDGLLVKAYEQVAKCPKENLLDLLT-- 132

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               T N     +  GQ LD+  E +D   E +   + ++KT  L+  A   GAI+A AS
Sbjct: 133 ----TFNKVATEVCEGQQLDMDFESLDQVTEDEYLHMIRLKTSVLLGGALRMGAIIAQAS 188

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
             ++E +  FG N+GI FQL DD+LD   D
Sbjct: 189 LEQQEFIYDFGVNVGIAFQLQDDILDVYGD 218


>gi|145220349|ref|YP_001131058.1| geranyltranstransferase [Prosthecochloris vibrioformis DSM 265]
 gi|145206513|gb|ABP37556.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Chlorobium phaeovibrioides DSM 265]
          Length = 335

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           +  K +E   RI+  L      T         + L +  RY L G GK+IR FL    + 
Sbjct: 13  VEKKYREYHTRINDALGQCFSAT-------TPETLYAPARYILEGKGKRIRPFLTLLASE 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             + +    ++V  A+E +H ++L+HDD+  MD   +R  +PTVH ++D+  AI++G+ +
Sbjct: 66  AVSGSSDNTMKVALAVEVLHNFTLMHDDI--MDEADLRHNRPTVHRKWDDNVAILSGDMM 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMI 180
           + Y++E+    ++           L    N     +  GQ LD++ E   +        +
Sbjct: 124 IAYSYELALQAESHR------HCELIHILNHANITICEGQALDMELEDKTDATIADYLDM 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTG L+  A E+G + A A++ +   L  FGE +G  FQ+ DD LD   +  K
Sbjct: 178 ISKKTGRLISAALEAGGVAADATKEQLMSLVTFGEKIGRAFQIQDDYLDIMAENGK 233


>gi|37528362|ref|NP_931707.1| octaprenyl diphosphate synthase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787800|emb|CAE16915.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 323

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 21  DDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGA 77
           DD+     + +   ++D  L++ + Y ++  GGK+IR  +    + +        + V A
Sbjct: 12  DDMAAVNETILSQLNSDVTLINQLGYYIISGGGKRIRPIIAILASRVLGYQGDKHITVAA 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F+++++  + 
Sbjct: 72  LIEFIHTATLLHDDV--VDESDMRRGKATANAMFGNAASVLVGDFIYTRSFQMMTALNS- 128

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               +R   ++S   N+  +G +  Q+++  D  I E     +   KT  L   A  S A
Sbjct: 129 ----MRVLKLMSEATNVIAEGEVL-QLMNCNDPNISEDDYMRVIYSKTARLFEVAAHSSA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           I+++A+  ++  L+ +G  LG  FQL DDLLD   D   L K
Sbjct: 184 ILSNATPEQEMALQNYGRYLGTAFQLIDDLLDYNADSDTLGK 225


>gi|238783532|ref|ZP_04627554.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970]
 gi|238715587|gb|EEQ07577.1| Octaprenyl-diphosphate synthase [Yersinia bercovieri ATCC 43970]
          Length = 323

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALHYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|53804815|ref|YP_113317.1| geranyltranstransferase [Methylococcus capsulatus str. Bath]
 gi|53758576|gb|AAU92867.1| geranyltranstransferase [Methylococcus capsulatus str. Bath]
          Length = 300

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 122/235 (51%), Gaps = 10/235 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
            L   ++ + +R++  LD  L         +  +RL  A+RY++LGG K++R  L     
Sbjct: 6   SLSDFMRSSQERVERALDARLPAAD-----RMPERLHQAMRYSVLGGGKRMRPLLTYATG 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
               V          A+E IH YSLIHDDLP+MD+  +RRGKPT H  YDE TAI+AG+G
Sbjct: 61  QTIGVAADLLDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKPTCHKAYDEATAILAGDG 120

Query: 123 LLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
           L   AF +++  P   +    R  ++ +L    G  GM+GGQ +D+    + +D   +  
Sbjct: 121 LQALAFHVLAQDPSIAVPAENRIAMIETLAKASGPAGMVGGQAIDLASVGKKLDLPGLEN 180

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   KTGAL+  +     +        + +RL  + + +G+ FQ+ DD+LD E D
Sbjct: 181 MHIRKTGALIRASVRLACLARPGLPAEQFDRLDHYAKCIGLAFQIQDDILDEESD 235


>gi|332967870|gb|EGK06966.1| octaprenyl-diphosphate synthase [Kingella kingae ATCC 23330]
          Length = 324

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L          +      + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 44  AGGKRLRPILTILSGKCLGYDDDKLYSLAAMVEFIHTSTLLHDDV--VDESELRRGRKTA 101

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    A++ G+ L T AF+++    +     ++   +++   NI  +G +  Q+++I
Sbjct: 102 NNLFGNAAAVLVGDFLYTRAFQLMVGSGS-----LKILEVMADATNIIAEGEVM-QLMNI 155

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  I E Q   + + KT  L   A + GAI+A A+  +++ L+ FG ++G  FQ+ DD+
Sbjct: 156 GNVDITEAQYLQVIQYKTAKLFEAAAQVGAILAGATAEQEQALKDFGMHMGTAFQIIDDV 215

Query: 228 LDCEE 232
           LD   
Sbjct: 216 LDYSG 220


>gi|119897305|ref|YP_932518.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72]
 gi|119669718|emb|CAL93631.1| octaprenyl-diphosphate synthase [Azoarcus sp. BH72]
          Length = 341

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +  + + +D ++   L      ++      + S       GGK++R  LV   A  
Sbjct: 25  LFAPIAADMQAVDALIRKALYSDVVLIRQVAEYIINS-------GGKRLRPALVLFSAGA 77

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    R+ A +E IH  +L+HDD+  +D   +RRG  T +  +    +++ G+ L 
Sbjct: 78  VGYRGTQHHRLAAVVEFIHTSTLLHDDV--VDESELRRGNKTANALFGNAASVLVGDFLY 135

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           T AF+++        D++R   +L+   NI  +G +  Q+L+  +  ++      + + K
Sbjct: 136 TRAFQMMVE-----VDSMRVMQILADATNIIAEGEVL-QLLNCHNADVEVEDYLRVIRYK 189

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T  L   A   GA++  A    +E +  FG +LG  FQL DD+LD    E D  K
Sbjct: 190 TAKLFEAASRLGAVLGGADPALEESMAAFGMHLGTAFQLIDDVLDYSADEADTGK 244


>gi|121593262|ref|YP_985158.1| dimethylallyltranstransferase [Acidovorax sp. JS42]
 gi|120605342|gb|ABM41082.1| Dimethylallyltranstransferase [Acidovorax sp. JS42]
          Length = 327

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 111/227 (48%), Gaps = 15/227 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + ++ + +D ++   L Q++  +       ++SA      GGK++R  L+        
Sbjct: 13  ALIADDMREVDKVIAARL-QSSVPLVGSVAQYIISA------GGKRLRPALLLLTCGALE 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   + A +E IH  +L+HDD+  +D   +RRG+PT +  +    +++ G+ L T 
Sbjct: 66  YKGEQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANETFGNPASVLVGDFLHTR 123

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F+++    +     +R   +L+   N+  +G +  Q+++  D  +DE     + + KT 
Sbjct: 124 SFQMMVEAGS-----MRILQVLADATNVIAEGEV-QQLMNTHDASLDEAGYLHVIRSKTA 177

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   +    AI+A ++ + ++    +G+ LG  FQ+ DD+LD + D
Sbjct: 178 KLFEASARLAAILAGSTPDIEQACADYGQALGTAFQVIDDVLDYDGD 224


>gi|160889241|ref|ZP_02070244.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492]
 gi|156861248|gb|EDO54679.1| hypothetical protein BACUNI_01663 [Bacteroides uniformis ATCC 8492]
          Length = 346

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 19/229 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  +RI++ + +L         T+    L + + Y L +GGK+IR  L+    +L+  + 
Sbjct: 28  ELLERINSHIAEL-------QFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDI 80

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                    IE  H Y+L+HDDL  MD    RRGK TVH  +D+  AI++G+ +L  A++
Sbjct: 81  TRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQ 138

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186
            ++    +    +          ++    +  GQ LD++ E   +    +   + ++KT 
Sbjct: 139 FMAQCPVEHLKEV------MDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTS 192

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L+  + + GA++  AS  + E+L  FG NLG+ FQL DD LD   D  
Sbjct: 193 VLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDVYGDAA 241


>gi|163858994|ref|YP_001633292.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM
           12804]
 gi|163262722|emb|CAP45025.1| putative octaprenyl-diphosphate synthase [Bordetella petrii]
          Length = 308

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  +V   A            + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 29  AGGKRMRPAMVLMMARALGYQGEHHRLLAAVVEFIHTATLLHDDV--VDESDLRRGRETA 86

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +R   +LS    I  +G +  Q+L++
Sbjct: 87  NAMFGNAASVLVGDYLYSRSFEMMVEAGS-----MRIMQILSEATTIIAEGEVL-QLLNV 140

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  + + +   + + KT  L   A + GA++A AS  ++E    +G ++G  FQL DD+
Sbjct: 141 HDPDVSQARYLQVVRYKTAKLFEAAAQVGAVLAGASPEQEEAAAAYGRHIGTAFQLVDDV 200

Query: 228 LDCEED 233
           LD   D
Sbjct: 201 LDYSGD 206


>gi|260061041|ref|YP_003194121.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501]
 gi|88785173|gb|EAR16342.1| putative isoprenyl synthetase [Robiginitalea biformata HTCC2501]
          Length = 325

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 73/226 (32%), Positives = 111/226 (49%), Gaps = 15/226 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E+ ++     DD L +    +Q      L   I Y + LGGK++R  LV   A LF    
Sbjct: 3   ESIEQYRQSFDDYLQKI---LQFGEPAGLYEPIGYIMDLGGKRMRPVLVLLSAELFGAPA 59

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             AL   AA+E  H +SL+HDD+  MD   +RRG+PTVH ++D  TAI++G+ +L  A++
Sbjct: 60  ENALPAAAAVEIFHNFSLVHDDI--MDAAPLRRGRPTVHRKWDPNTAILSGDAMLIRAYQ 117

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTG 186
            +     +L         L+   +     +  GQ  D+  E  D+    +   + + KT 
Sbjct: 118 QLDGYPPELFQP------LTRLFSRTALEVCEGQQYDMDFESRDDVGIPEYLRMIEFKTA 171

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L+  A + GAI+  A   E+E +  FG  LG+ FQL DD LD   
Sbjct: 172 VLLGCALQMGAIIGGAEVAEQEAVYDFGIRLGLAFQLQDDYLDVFG 217


>gi|317178721|dbj|BAJ56509.1| geranyltranstransferase [Helicobacter pylori F30]
          Length = 303

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|189463880|ref|ZP_03012665.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM
           17393]
 gi|189438453|gb|EDV07438.1| hypothetical protein BACINT_00214 [Bacteroides intestinalis DSM
           17393]
          Length = 324

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 16/222 (7%)

Query: 22  DLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           +LL +  SH+     T+    L + + Y L +GGK+IR  L+    +L+  +        
Sbjct: 6   ELLEKINSHITDLQFTRTPKGLYAPVEYVLSMGGKRIRPVLMLMAYNLYQEDVTRIYAPA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE  H Y+L+HDDL  MD    RRGK TVH  +++ TAI++G+ +L  A++ ++    
Sbjct: 66  IGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWNDNTAILSGDAMLILAYQFMAECSP 123

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193
                +     L+         +  GQ +D++ E  ++    +   + ++KT  L+  + 
Sbjct: 124 SFLKEVMDLFSLT------ALEICEGQQMDMEFEQRNDVAAEEYLEMIRLKTAVLLAASL 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA +  AS  + +RL  FG  +G+ FQL DDLLD   ++ 
Sbjct: 178 RIGARLGGASVEDADRLYDFGMQIGVAFQLKDDLLDVYGNVK 219


>gi|11499867|ref|NP_071111.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Archaeoglobus fulgidus DSM 4304]
 gi|2648237|gb|AAB88971.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           {Methanobacterium thermoautotrophicum [Archaeoglobus
           fulgidus DSM 4304]
          Length = 326

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 17/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  ++ + ++ I+  +++LL +       +    L  A R+ +  GGK++R  +      
Sbjct: 11  LKEEIAKRAEIINKAIEELLPE-------REPIGLYKAARHLIKAGGKRLRPVISLLAVE 63

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               ++   +    +IE IH ++L+HDD+  MD   +RRG PTVH  Y E TAI+AG+ L
Sbjct: 64  ALGKDYRKIIPAAVSIETIHNFTLVHDDI--MDRDEMRRGVPTVHRVYGEATAILAGDTL 121

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMI 180
              AF++++    + +   ++  MLS         +  GQ  D+  E  +         +
Sbjct: 122 FAEAFKLLTKCDVESEGIRKATEMLSDV----CIKICEGQYYDMSFEKKESVSEEEYLRM 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            ++KTG L+  +    A++   S+   + L  +G   GI FQ+ DDLLD  E+  K
Sbjct: 178 VELKTGVLIAASAALPAVLFGESEEIVKALWDYGVLSGIGFQIQDDLLDLTEETGK 233


>gi|254427749|ref|ZP_05041456.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
 gi|196193918|gb|EDX88877.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
          Length = 323

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 15/226 (6%)

Query: 14  KRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           K I  ++DD    + Q  SH    +   +     Y +  GGK++R  +   CA       
Sbjct: 4   KAIYAVVDDDFEAVNQFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAILCARAAGYQG 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              + V A IE +H  +L+HDD+  +D   +RRG+PTV+  +    +++ G+ L++ A +
Sbjct: 64  DRHVDVAAIIEFLHTATLLHDDV--VDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQ 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++ + +     + R   + S + N   +G +  Q+++++D    E     +   KT  + 
Sbjct: 122 LMVALR-----HPRLLDIFSQSTNTISEGEVL-QLINVRDPNTSEENYMRVIHHKTAKMF 175

Query: 190 CFACESGAIMAHASQ--NEKERLRCFGENLGIIFQLADDLLDCEED 233
             A E+GA++  A +  +  +    +G +LGI FQL DD+LD + D
Sbjct: 176 ESAAETGAVL-GADEVSDHVDAFATYGRHLGIAFQLIDDVLDYQGD 220


>gi|156935711|ref|YP_001439627.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533965|gb|ABU78791.1| hypothetical protein ESA_03580 [Cronobacter sakazakii ATCC BAA-894]
          Length = 323

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIVSGGGKRIRPMIAVLAARALGYEGKAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A AS+ ++  L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEESYMRVIYSKTARLFEAAAQCSGILAGASEAQERALQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219


>gi|330994690|ref|ZP_08318613.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1]
 gi|329758331|gb|EGG74852.1| Geranyltranstransferase [Gluconacetobacter sp. SXCC-1]
          Length = 311

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 151/238 (63%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           L + +   +  I++++D LL +           RL+ A+RYA L GGK++R +LV E AS
Sbjct: 20  LRASMSARATAIESMIDRLLPRVEG-----GEARLIDAMRYATLGGGKRLRGYLVAEVAS 74

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LFNV    A RV A++E +H YSL+HDDLP+MD+  +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 75  LFNVAAEGADRVAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDAL 134

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T AF+I+++P T     +R  L+ +L    G  GM+GGQM+D++ E   +   +V  + 
Sbjct: 135 QTMAFDILANPLTHAGAEVRINLVRALADASGAAGMVGGQMIDMEGEGRALSLEEVARLH 194

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +KTG L+ ++ E+GAI+  A ++ + R+  +G +LG  FQ+ADD+LD     E+L K
Sbjct: 195 ALKTGCLIRYSAEAGAILGQAGEDARLRISAYGRDLGAAFQIADDVLDATASAEELGK 252


>gi|307293392|ref|ZP_07573238.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
 gi|306881458|gb|EFN12674.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
          Length = 302

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 98/232 (42%), Positives = 145/232 (62%), Gaps = 8/232 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           + S+    ++ +D + D LL      +      RL  A+R+A + GGK++R  LV   + 
Sbjct: 11  VASRAAALAEDVDRLFDTLLA-----VPDDPRRRLYEAMRHAAMGGGKRLRPLLVQAASD 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LFN++  +ALRVG A+ECIH YSL+HDDLP+MD+  +RRGKPTVH  +DE TAI+AG+ L
Sbjct: 66  LFNISRDSALRVGVAVECIHVYSLVHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDCL 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
              AFEI++  +T     +R +L+ +L    G  GM GGQM+D++ E    D   V  +Q
Sbjct: 126 HDLAFEILADEETHPDPFVRVELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQ 185

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++KTGAL+ F  ++ AIMA    + + RL  +  ++G+ FQ+ADDLLD E D
Sbjct: 186 QLKTGALIAFCVDAAAIMARIPPDARPRLHGYARDIGLAFQIADDLLDVEGD 237


>gi|254038351|ref|ZP_04872409.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
           sp. 1_1_43]
 gi|226839975|gb|EEH71996.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
           sp. 1_1_43]
          Length = 340

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 19  NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 78

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 79  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 136

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 137 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 190

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 191 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 236


>gi|295097675|emb|CBK86765.1| Geranylgeranyl pyrophosphate synthase [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 323

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  QGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  S+ +++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCSEAQEKGLQDYGRYLGTAFQLIDDLLDYSAD 219


>gi|260912975|ref|ZP_05919460.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325]
 gi|260632965|gb|EEX51131.1| octaprenyl-diphosphate synthase [Pasteurella dagmatis ATCC 43325]
          Length = 358

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +     IE IH  +L+HDD+  +D   +RRG PT +
Sbjct: 78  GGKRIRPMIAILAARALGYTSDEPITCATFIEFIHTATLLHDDV--VDESELRRGNPTAN 135

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++   +     +R   ++S   N+  +G +  Q++++ 
Sbjct: 136 AEFGNAASVLVGDFIYTRAFQLMTQLNS-----LRILKVMSDATNVIAEGEV-QQLMNVN 189

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    AI+A A+  +++ L+ +G  LG  FQL DD+L
Sbjct: 190 DPNTTEENYMQVIYGKTARLFEAATHCSAILAKATAAQEKALQDYGRYLGTAFQLVDDIL 249

Query: 229 DCEE 232
           D   
Sbjct: 250 DYSS 253


>gi|189184004|ref|YP_001937789.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda]
 gi|189180775|dbj|BAG40555.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str. Ikeda]
          Length = 338

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 8/227 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           S + + SK +D  + ++       + +     +     Y    GGK+IR  L    + LF
Sbjct: 11  SFIDKLSKFLDKDMSEVNNVILDCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLF 70

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N + L+   + AA+E IH  +L+HDD+  +D   +RR  PTVH+++D  T+I+ G+ L +
Sbjct: 71  NYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVHLKWDTKTSILIGDFLFS 128

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +F+++        ++IR+    SL+ N  + G +         + I E + F + + KT
Sbjct: 129 QSFKLMIK-----SNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKT 183

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             L   +CE  AI+++ S      ++ FG  LG+IFQ+ DD+LD   
Sbjct: 184 AELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFG 230


>gi|237750142|ref|ZP_04580622.1| geranyltranstransferase [Helicobacter bilis ATCC 43879]
 gi|229374329|gb|EEO24720.1| geranyltranstransferase [Helicobacter bilis ATCC 43879]
          Length = 293

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 76/231 (32%), Positives = 125/231 (54%), Gaps = 9/231 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLF 65
           S  ++     ++ L D   + +      H ++    +   L GGK+ R   L++   +  
Sbjct: 2   SFFKQTCNEFESYLHDNQPEISGFHP--HFEKAFWEM--VLNGGKRFRPNLLLSVVCAEA 57

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A  V  +IEC+H YSLIHDDLP+MDN  +RR  PT+H +YDEV+AI+ G+GL T
Sbjct: 58  KEQAKNAFDVCLSIECLHTYSLIHDDLPAMDNAALRRNHPTLHCKYDEVSAILIGDGLNT 117

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKM 183
           Y+F ++++       ++ ++L+  L  N G+ GM+ GQ LD   E       ++  I   
Sbjct: 118 YSFYLLANA--HFAPSVVAELISCLAENGGIGGMVLGQALDCYFEHTTLPLDKLQFIHTH 175

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           KT  L+  + + GAI+A+ S + ++ L  FG  LG+ FQ+ DD++D  +D 
Sbjct: 176 KTAKLIAASLKMGAIIANLSLDMQKFLYDFGLVLGLYFQIRDDIIDSIQDE 226


>gi|260775534|ref|ZP_05884431.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608715|gb|EEX34880.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 323

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPLLAVLSARALGYQGQAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   NI  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNIIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A    +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPSEVETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|159905289|ref|YP_001548951.1| polyprenyl synthetase [Methanococcus maripaludis C6]
 gi|159886782|gb|ABX01719.1| Polyprenyl synthetase [Methanococcus maripaludis C6]
          Length = 317

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 19/229 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +E   +ID+ L   + +         + +L  A ++ LL GGK++R +L      L   +
Sbjct: 5   REILSKIDSELKKYVEK---------DTKLYGASKHLLLAGGKRVRPYLSIITYLLKKDD 55

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L    ++E IH Y+L+HDD+  MDN   RRG PTVH  Y E  AI+AG+ L   AF
Sbjct: 56  ITEILAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
           E +S+ +   K +   +++     +     +  GQ  D++ E  F    + F +   KTG
Sbjct: 114 EALSNIEDSNKAHEVLKVL-----SKACVEVCEGQTDDMEFEERFPTLYEYFDMISKKTG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           AL+    E GA+MA  +  E+E L  + + +G+ FQ+ DD+LD   D  
Sbjct: 169 ALIVAPVEIGAVMADCTPEEREALCNYAKRIGMTFQIQDDVLDLIGDQK 217


>gi|301644900|ref|ZP_07244870.1| polyprenyl synthetase [Escherichia coli MS 146-1]
 gi|301076794|gb|EFK91600.1| polyprenyl synthetase [Escherichia coli MS 146-1]
          Length = 320

 Score =  191 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|208809557|ref|ZP_03251894.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208729358|gb|EDZ78959.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4206]
          Length = 324

 Score =  191 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 28  SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV 87

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 88  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 140

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  E++ L+ 
Sbjct: 141 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQD 199

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 200 YGRYLGTAFQLIDDLLDYNAD 220


>gi|90415578|ref|ZP_01223512.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
 gi|90332901|gb|EAS48071.1| geranyltranstransferase [marine gamma proteobacterium HTCC2207]
          Length = 295

 Score =  191 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 82/234 (35%), Positives = 130/234 (55%), Gaps = 10/234 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
             +   +   S ++D  L+ +L        T   + L +A+RY++  GGK++R  L    
Sbjct: 2   SSIKDIISHYSAQVDAQLEAMLP-----AATGPAEPLFAAMRYSVFNGGKRLRPALCFAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A     +     +V AA+E IH YSLIHDDLP+MD+  +RRGKPT HIQ+DE TAI+AG+
Sbjct: 57  ADAVAGSDANTAKVAAALEMIHAYSLIHDDLPAMDDDDLRRGKPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           GL + AF+ +    ++L   I  +L+ +L+   G  GM+ GQ +D+      ++   + +
Sbjct: 117 GLQSLAFQQLCEL-SELDPTIVVELVSTLSRLGGCSGMVAGQAIDLAATGSVLELDALKV 175

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KTGAL+  +   GA+    ASQ +   L+ F   +G+ FQ+ DD+LD E 
Sbjct: 176 MHAHKTGALIEASVLMGALATGQASQEQLGALKDFARAIGLAFQIQDDILDVES 229


>gi|26249771|ref|NP_755811.1| octaprenyl diphosphate synthase [Escherichia coli CFT073]
 gi|26110199|gb|AAN82385.1|AE016767_145 Octaprenyl-diphosphate synthase [Escherichia coli CFT073]
          Length = 323

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|193065379|ref|ZP_03046450.1| octaprenyl-diphosphate synthase [Escherichia coli E22]
 gi|260846000|ref|YP_003223778.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str.
           12009]
 gi|192927020|gb|EDV81643.1| octaprenyl-diphosphate synthase [Escherichia coli E22]
 gi|257761147|dbj|BAI32644.1| octaprenyl diphosphate synthase [Escherichia coli O103:H2 str.
           12009]
 gi|323162879|gb|EFZ48714.1| polyprenyl synthetase family protein [Escherichia coli E128010]
          Length = 323

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|116491232|ref|YP_810776.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1]
 gi|290890777|ref|ZP_06553844.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429]
 gi|116091957|gb|ABJ57111.1| farnesyl-diphosphate synthase [Oenococcus oeni PSU-1]
 gi|290479549|gb|EFD88206.1| hypothetical protein AWRIB429_1234 [Oenococcus oeni AWRIB429]
          Length = 275

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 11/226 (4%)

Query: 21  DDLLLQTASHMQTQHNDR---LLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALRV 75
           +  L +  + +     DR   +   I YAL   GK++R  L     A+  NV + + +  
Sbjct: 8   NRYLPEINNDLSNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEA 67

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E +H YSL+HDDLP MD+   RR + +   ++    A++ G+GLLT AF+ IS+  
Sbjct: 68  ATAVEFVHAYSLVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISNL- 126

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFAC 193
             L ++IR +L+ +L    G   M+ GQ  D   QD+      +  I  MKTGALM +A 
Sbjct: 127 -SLPESIRLRLIYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLEFIHLMKTGALMTYAA 185

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
            +G I+A  S ++   L  +G NLGI FQ+ DDL D ++D    KK
Sbjct: 186 TAGGILAGLSDDKLRALNIYGANLGIAFQIKDDLRDIKQDEEENKK 231


>gi|284040578|ref|YP_003390508.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74]
 gi|283819871|gb|ADB41709.1| Dimethylallyltranstransferase [Spirosoma linguale DSM 74]
          Length = 323

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 12/221 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +D L  +  S    Q+   L + IRY + LGGK++R  L    A LF  +   A+R    
Sbjct: 7   IDALQQELQSIQYGQNPPELYNPIRYIMSLGGKRMRPLLTLMGAYLFTDDWRKAVRPALG 66

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E  H ++L+HDD+  MD   +RRG+PTVH +++   AI++G+ +L  A++++ + +   
Sbjct: 67  VEVFHNFTLMHDDI--MDQAPLRRGQPTVHEKWNGNIAILSGDVMLVNAYQLMLNVEADK 124

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACES 195
                ++   +         +  GQ +D+  E    + E +   + ++KT  L+ ++ E 
Sbjct: 125 LAVALARFSRTAAE------VCEGQQMDMNFETRWDVSEAEYIDMIRLKTSVLLGYSLEL 178

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           G ++  A +     L   G N+G+ FQL DDLLD   D  K
Sbjct: 179 GGLIGGADEETNLHLYEGGMNIGVGFQLKDDLLDVYGDPAK 219


>gi|84624779|ref|YP_452151.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188577762|ref|YP_001914691.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84368719|dbj|BAE69877.1| geranyltranstransferase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188522214|gb|ACD60159.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 291

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 113/212 (53%), Gaps = 1/212 (0%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +  L+      T    RL +A+R+A+LGG K++R  LV    +LF            A+E
Sbjct: 14  ERNLEAGLPSATCAPHRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVE 73

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     + 
Sbjct: 74  LIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLAAASASAEL 133

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            +     L+               +D   +      +  +  +KTGAL+  +   GA+  
Sbjct: 134 RVGWMQSLATAAGAAGMCGGQALDIDATGQLQPLQDLQRMHALKTGALIRASVHMGALTG 193

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A+  +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 194 GAATADQQRLDEFADALGLAFQVRDDILDVES 225


>gi|189499392|ref|YP_001958862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
 gi|189494833|gb|ACE03381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
          Length = 332

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           MN  +   L++  ++       +  +            L    RY L G GK+IR FL  
Sbjct: 1   MN--ISVTLEQVEQKYRQYHKRINDELGKCFTKDSPRSLYGPARYILDGTGKRIRPFLTL 58

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   A++   A+E +H ++L+HDD+  MD   +R G+PTVH+++D   AI++
Sbjct: 59  LAAEAVCGSSENAIKTALAVEILHNFTLVHDDI--MDQADLRHGRPTVHVKWDSTAAILS 116

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQ 176
           G+ ++ +A+E     KT   D       L    N     +  GQ +D++ E         
Sbjct: 117 GDMMIAFAYECALQTKTARHDE------LVHILNDANITICEGQAIDMELEQRQDATIAD 170

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +   KTG L+  + E+G I+  A   + E+L  FG+ +G  FQ+ DD LD   +  K
Sbjct: 171 YLDMIAKKTGRLISASLEAGGIVGDADSEQIEKLMLFGDKIGRAFQVQDDYLDIMAENGK 230


>gi|251792484|ref|YP_003007210.1| geranyltranstransferase [Aggregatibacter aphrophilus NJ8700]
 gi|247533877|gb|ACS97123.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Aggregatibacter aphrophilus NJ8700]
          Length = 296

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 87/233 (37%), Positives = 126/233 (54%), Gaps = 11/233 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
               LQ+  +RI++ L        S         L+ A++Y  LLGGK+IR FLV     
Sbjct: 4   FSLDLQQVQQRINSFLASQFEHINS-----SPAPLVEAMKYGLLLGGKRIRPFLVYATGR 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   N        AAIE IH YSLIHDDLP+MD+  +RRG  T HI +DE TAI+AG+ L
Sbjct: 59  ILGANLAHLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
            ++AFEI++     L    +  L+ +L+   G++GM  GQ LD+  E   I  T++  I 
Sbjct: 119 QSFAFEILTDI-PDLSAQQKLALIKTLSAAAGVKGMCLGQSLDLISEQKAISLTELEHIH 177

Query: 182 KMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KTGAL+  A + G I +   A +   ++L  +   +G+ FQ+ DD+LD E 
Sbjct: 178 LNKTGALLTAALKLGFICSPHFADEALLQQLERYATAIGLAFQVQDDILDIEG 230


>gi|134046661|ref|YP_001098146.1| dimethylallyltranstransferase [Methanococcus maripaludis C5]
 gi|132664286|gb|ABO35932.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Methanococcus maripaludis C5]
          Length = 317

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 19/229 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           +E   +ID+ L   + +         + +L  A ++ LL GGK++R +L      L   +
Sbjct: 5   REILSKIDSELKKYMEK---------DTKLYGASKHLLLAGGKRVRPYLSIITYLLKKDD 55

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L    ++E IH Y+L+HDD+  MDN   RRG PTVH  Y E  AI+AG+ L   AF
Sbjct: 56  ITEILAPALSVELIHNYTLVHDDI--MDNDDQRRGMPTVHTIYGEPIAILAGDLLYAKAF 113

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
           E +S+ +   K +   +++     +     +  GQ  D++ E  F    + F +   KTG
Sbjct: 114 EALSNIEDSKKAHEVLKVL-----SKACVEVCEGQTDDMEFEERFPTLDEYFDMISKKTG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           AL+    E GA+MA+ +  E++ L  + + +G+ FQ+ DD+LD   D  
Sbjct: 169 ALIVAPVEIGAVMANCTPEERKALCNYAKRIGMTFQIQDDVLDLIGDQK 217


>gi|300770896|ref|ZP_07080773.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762169|gb|EFK58988.1| possible geranyltranstransferase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 325

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 13/206 (6%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHD 90
            Q    +   IRY L L GK++R  L    A LF   +    +    AIE  H +SLIHD
Sbjct: 21  PQEPANMYDPIRYILTLKGKQVRPVLTLMGAQLFGEEDMEKVVPAALAIEYFHNFSLIHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MD   +RRG+ TVH ++D+  AI++G+GLL  A+E ++    +   ++ +      
Sbjct: 81  DI--MDKAPLRRGQLTVHEKWDDSVAILSGDGLLVKAYEQVAKCPKENLLDLLT------ 132

Query: 151 THNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           T N     +  GQ LD+  E +    E Q   + ++KT  L+  A   GAI+  AS  ++
Sbjct: 133 TFNKVATEVCEGQQLDMDFESLNQVTEAQYLHMIRLKTSVLLGGALRMGAIIGQASVEQQ 192

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E +  FG N+GI FQL DD+LD   D
Sbjct: 193 ELIYDFGVNVGIAFQLQDDILDVYGD 218


>gi|317009586|gb|ADU80166.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Helicobacter pylori India7]
          Length = 303

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV----- 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G +++     E  + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVVSGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEK 238


>gi|329574366|gb|EGG55938.1| geranyltranstransferase [Enterococcus faecalis TX1467]
          Length = 286

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G I+A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|170723659|ref|YP_001751347.1| polyprenyl synthetase [Pseudomonas putida W619]
 gi|169761662|gb|ACA74978.1| Polyprenyl synthetase [Pseudomonas putida W619]
          Length = 322

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTSEEVYMEVIRGKTAMLFEASTHSAAALAGATDEQREALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEED 233
           LD + D
Sbjct: 214 LDYKGD 219


>gi|91212610|ref|YP_542596.1| octaprenyl diphosphate synthase [Escherichia coli UTI89]
 gi|110643427|ref|YP_671157.1| octaprenyl diphosphate synthase [Escherichia coli 536]
 gi|117625480|ref|YP_858803.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1]
 gi|191174477|ref|ZP_03035977.1| octaprenyl-diphosphate synthase [Escherichia coli F11]
 gi|218560257|ref|YP_002393170.1| octaprenyl diphosphate synthase [Escherichia coli S88]
 gi|218691477|ref|YP_002399689.1| octaprenyl diphosphate synthase [Escherichia coli ED1a]
 gi|227887908|ref|ZP_04005713.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972]
 gi|300980004|ref|ZP_07174826.1| polyprenyl synthetase [Escherichia coli MS 200-1]
 gi|300990877|ref|ZP_07179365.1| polyprenyl synthetase [Escherichia coli MS 45-1]
 gi|301047968|ref|ZP_07195012.1| polyprenyl synthetase [Escherichia coli MS 185-1]
 gi|331659474|ref|ZP_08360416.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA206]
 gi|91074184|gb|ABE09065.1| octaprenyl diphosphate synthase [Escherichia coli UTI89]
 gi|110345019|gb|ABG71256.1| octaprenyl-diphosphate synthase [Escherichia coli 536]
 gi|115514604|gb|ABJ02679.1| octaprenyl diphosphate synthase [Escherichia coli APEC O1]
 gi|190905232|gb|EDV64871.1| octaprenyl-diphosphate synthase [Escherichia coli F11]
 gi|218367026|emb|CAR04797.1| octaprenyl diphosphate synthase [Escherichia coli S88]
 gi|218429041|emb|CAR09987.2| octaprenyl diphosphate synthase [Escherichia coli ED1a]
 gi|227835304|gb|EEJ45770.1| possible trans-hexaprenyltranstransferase [Escherichia coli 83972]
 gi|294490790|gb|ADE89546.1| octaprenyl-diphosphate synthase [Escherichia coli IHE3034]
 gi|300300164|gb|EFJ56549.1| polyprenyl synthetase [Escherichia coli MS 185-1]
 gi|300307867|gb|EFJ62387.1| polyprenyl synthetase [Escherichia coli MS 200-1]
 gi|300407044|gb|EFJ90582.1| polyprenyl synthetase [Escherichia coli MS 45-1]
 gi|307555280|gb|ADN48055.1| octaprenyl-diphosphate synthase [Escherichia coli ABU 83972]
 gi|307625214|gb|ADN69518.1| octaprenyl diphosphate synthase [Escherichia coli UM146]
 gi|315288960|gb|EFU48358.1| polyprenyl synthetase [Escherichia coli MS 110-3]
 gi|315294881|gb|EFU54220.1| polyprenyl synthetase [Escherichia coli MS 153-1]
 gi|315297896|gb|EFU57166.1| polyprenyl synthetase [Escherichia coli MS 16-3]
 gi|323951294|gb|EGB47169.1| polyprenyl synthetase [Escherichia coli H252]
 gi|323957666|gb|EGB53380.1| polyprenyl synthetase [Escherichia coli H263]
 gi|324008745|gb|EGB77964.1| polyprenyl synthetase [Escherichia coli MS 57-2]
 gi|324012137|gb|EGB81356.1| polyprenyl synthetase [Escherichia coli MS 60-1]
 gi|331054056|gb|EGI26085.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA206]
          Length = 323

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|152991761|ref|YP_001357482.1| geranyltranstransferase [Sulfurovum sp. NBC37-1]
 gi|151423622|dbj|BAF71125.1| geranyltranstransferase [Sulfurovum sp. NBC37-1]
          Length = 284

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 74/229 (32%), Positives = 132/229 (57%), Gaps = 12/229 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTA 72
           +R +T L + L +  +     + + L + ++    GGK+ R  L+      +    + +A
Sbjct: 2   QRFETYLSENLPE-VTSFHPVYEEALGAMLQ---AGGKRFRPMLLLSIVDTYEPMLYDSA 57

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L V  A+E  H YSLIHDDLP+MD+  +RRG  T+H ++DEVTAI+AG+ L + AF +I+
Sbjct: 58  LPVALALEMFHTYSLIHDDLPAMDDADLRRGHQTLHKRFDEVTAILAGDALNSDAFYLIA 117

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
             K  L+++++ +L+  L  + G +GM+ GQ +D   E   +   +V ++   KT  L+ 
Sbjct: 118 --KAPLREDVKIKLVELLARDGGSRGMVLGQAIDCYFENRPLTIDEVKVLHTNKTAKLIA 175

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
            + + GA++   + + ++ L  FG +LG++FQ+ DD++D    EE+  K
Sbjct: 176 VSLQMGAVIVRLAPDVQKALYDFGIDLGLLFQIQDDIIDETQTEEEAGK 224


>gi|15803727|ref|NP_289761.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 EDL933]
 gi|15833320|ref|NP_312093.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168751593|ref|ZP_02776615.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754169|ref|ZP_02779176.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168765367|ref|ZP_02790374.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168769043|ref|ZP_02794050.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168778214|ref|ZP_02803221.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781331|ref|ZP_02806338.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786073|ref|ZP_02811080.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC869]
 gi|168800901|ref|ZP_02825908.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC508]
 gi|195940043|ref|ZP_03085425.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208813351|ref|ZP_03254680.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818474|ref|ZP_03258794.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396313|ref|YP_002272657.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327318|ref|ZP_03443401.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254795136|ref|YP_003079973.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261228198|ref|ZP_05942479.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255054|ref|ZP_05947587.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|12517802|gb|AAG58321.1|AE005547_7 octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           EDL933]
 gi|13363539|dbj|BAB37489.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           Sakai]
 gi|187766779|gb|EDU30623.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014375|gb|EDU52497.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001013|gb|EDU69999.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358538|gb|EDU76957.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361792|gb|EDU80211.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189364885|gb|EDU83301.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374093|gb|EDU92509.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC869]
 gi|189376838|gb|EDU95254.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC508]
 gi|208734628|gb|EDZ83315.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738597|gb|EDZ86279.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157713|gb|ACI35146.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209758168|gb|ACI77396.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|209758170|gb|ACI77397.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|209758172|gb|ACI77398.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|209758176|gb|ACI77400.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|217319685|gb|EEC28110.1| octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254594536|gb|ACT73897.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           TW14359]
 gi|320189540|gb|EFW64199.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640258|gb|EFX09830.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645555|gb|EFX14564.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str.
           493-89]
 gi|320650865|gb|EFX19322.1| octaprenyl diphosphate synthase [Escherichia coli O157:H- str. H
           2687]
 gi|320666771|gb|EFX33750.1| octaprenyl diphosphate synthase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326337887|gb|EGD61721.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           1125]
 gi|326347457|gb|EGD71182.1| Octaprenyl-diphosphate synthase [Escherichia coli O157:H7 str.
           1044]
          Length = 323

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|319406067|emb|CBI79697.1| octaprenyl-diphosphate synthase [Bartonella sp. AR 15-3]
          Length = 337

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S  +E+ KR++ ++  +  ++   M  + ++ L+S+      GGK+IR  +    A +
Sbjct: 19  LFSLTKEDMKRVNQLIISM-AKSNVTMIPEISNYLISS------GGKRIRPMITLATAHM 71

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F       +++  A+E +H  +L+HDD+  +D   +RRGK T  I +    +I+ G+ LL
Sbjct: 72  FEYQGDEHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTARILWGNQASILVGDFLL 129

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             AF+++    +     + +  +LS    I  +G +  Q+   ++   + +    I K K
Sbjct: 130 GQAFKMMVDVGS-----LEALSVLSNAAAIIAEGEVM-QLSAAKNIETNVSDYLKIIKAK 183

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL   A E G I+A     E+  L  +G +LG+ FQL DD+LD   
Sbjct: 184 TAALFSAAAEIGPIIAGYGHEERSALHQYGLSLGLAFQLIDDVLDYSS 231


>gi|302390068|ref|YP_003825889.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200696|gb|ADL08266.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 326

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 8/211 (3%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L+      +  + ++ +   ++    GGK++R  LV      F+  +   +    A E I
Sbjct: 21  LIENELMRVIEEGDESIRGILKDFFAGGKRLRPKLVLLSGLCFSPVNTKMIYSAVAAELI 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SLIHDD+  +D    RR +PT++  Y   TA++AG+ +   AFE++           
Sbjct: 81  HTASLIHDDV--IDRSDYRRNRPTINYVYGNHTAVLAGDYIFAKAFEVLCRQNLNRCMGY 138

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
             + +  +     +      Q  +  D  +DE + F   + KT +L+   C+SGA    A
Sbjct: 139 LVEAIQEMCTGEII------QARESPDLTVDEDRYFRTIEKKTASLIAACCKSGADCGKA 192

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + + E++  FG  LG  FQ+ DD+LD   D
Sbjct: 193 DEVQIEKMGLFGLYLGYAFQIVDDILDITGD 223


>gi|15889973|ref|NP_355654.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58]
 gi|15157936|gb|AAK88439.1| geranyltranstransferase [Agrobacterium tumefaciens str. C58]
          Length = 304

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 111/235 (47%), Positives = 155/235 (65%), Gaps = 3/235 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              ++L+EN+ + + +L  LL   A   +      LL A+R+  L GGK++R FLV E  
Sbjct: 7   NFETRLRENAAKTEALLGHLLSGEARADEITRPQNLLEAMRHGVLNGGKRLRPFLVIESV 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L   +    L VGAA+EC+HCYSL+HDDLP+MD+  +RRG+PTVH ++DE TAI+AG+ 
Sbjct: 67  ALLGGDAEAGLHVGAALECLHCYSLVHDDLPAMDDDDLRRGQPTVHRKFDEATAILAGDS 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMI 180
           LLT AF+II+S    L    ++ L++SL    G+ GM GGQ LD+  E    DE  +  +
Sbjct: 127 LLTLAFDIIASDDNPLAAERKAALVISLARAAGIGGMAGGQALDLAAEKKAPDEDGIITL 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q MKTGAL+ FACE+GAI+A ++Q E++RLR FGE +G+ FQLADDLLD   D  
Sbjct: 187 QAMKTGALLRFACEAGAIIAGSNQAERQRLRLFGEKIGLSFQLADDLLDLTADAA 241


>gi|152990006|ref|YP_001355728.1| geranyltranstransferase [Nitratiruptor sp. SB155-2]
 gi|151421867|dbj|BAF69371.1| geranyltranstransferase [Nitratiruptor sp. SB155-2]
          Length = 290

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 7/216 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRV 75
            + +D L +   H+Q+ H      A+ Y L  GGK+ R  L+       N     +AL V
Sbjct: 5   QLFEDHLQKNLPHVQSFHPFY-TDALGYMLQAGGKRFRPLLLLSIVQAKNPLLIPSALDV 63

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIE  H YSLIHDDLP MD+  +RRGK T+H +YDE+TA++ G+ L TYAF  I+  K
Sbjct: 64  AMAIEIFHTYSLIHDDLPVMDDADLRRGKETLHKKYDELTAVLVGDALNTYAFYCIA--K 121

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193
           + L  + R++L   L  N G++GM+ GQ+LD   E   +   Q+  +   KT  L+  + 
Sbjct: 122 SALSSDTRAKLTEILAQNGGIEGMVHGQILDCYFENQKLSLEQLQQLHINKTAKLIAASL 181

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + GA++      E+ RL  FG +LG++FQ+ DD++D
Sbjct: 182 QMGAVIVDLPFIEQNRLYNFGIDLGLLFQIQDDIID 217


>gi|261856267|ref|YP_003263550.1| polyprenyl synthetase [Halothiobacillus neapolitanus c2]
 gi|261836736|gb|ACX96503.1| Polyprenyl synthetase [Halothiobacillus neapolitanus c2]
          Length = 309

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 18/237 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL--- 64
            Q       T  D  L Q   +M  +   RL  AI +A++ GGK++R  LV   ASL   
Sbjct: 12  FQSWQSDFQTAFDIRLKQRLGNMLGESPQRLKDAIGHAVIDGGKRLRPILVVLGASLDST 71

Query: 65  -------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                   +           AIE IH YSLIHDDLPSMDN  +RRGKPTVH  +DE TAI
Sbjct: 72  PGSLPDPNDPRLEQLWNAAVAIELIHGYSLIHDDLPSMDNDDLRRGKPTVHRVFDEATAI 131

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDET 175
           +AG+ L + AF +++      + +++++L      + G   M+ GQ LD+          
Sbjct: 132 LAGDALQSLAFSLLADAP---QTDVKTRLNWVSLLSTGANRMVFGQQLDLNPPAQIPALA 188

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++  + ++KTGAL+  A   GA    +S  ++  L  F   LG+ FQ+ DD+LD   
Sbjct: 189 ELTRMHELKTGALLYAALMMGA--NQSSAEDRAALEAFIRPLGLAFQIQDDILDATG 243


>gi|297380126|gb|ADI35013.1| Geranyltranstransferase [Helicobacter pylori v225d]
          Length = 303

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 15/244 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN    S      +R ++ L+   L    H+++ H     +     L GGK+ R  L   
Sbjct: 1   MNNPNLSFYHNECERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLA 56

Query: 61  C-ASLFN-----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              +L              ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE 
Sbjct: 57  VLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDET 116

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172
           TA++ G+ L TY+FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   +
Sbjct: 117 TAVLIGDALNTYSFELLSN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPL 174

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCE 231
           +  Q+  + + KT  L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  
Sbjct: 175 NLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVT 234

Query: 232 EDLP 235
           +D  
Sbjct: 235 QDEE 238


>gi|189425336|ref|YP_001952513.1| polyprenyl synthetase [Geobacter lovleyi SZ]
 gi|189421595|gb|ACD95993.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
          Length = 322

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 13/232 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q   + I   L  +  Q    +++     +     Y L  GGK+IR  ++   A L   
Sbjct: 1   MQAALELIGEDLKQVEEQFRKDLESDVP-LIRKVGEYVLASGGKRIRPAMLLLAARLCEY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+ + + +E IH  +L+HDD+  +D+  +RRG  + +  +    +++ G+ L + +
Sbjct: 60  QGNQAIPLASVVEFIHTATLLHDDV--VDSATLRRGLASANTLWGNEASVLIGDFLFSKS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++ +  +     +    ++S    +  +G +  Q+L   +  + E Q   + + KT  
Sbjct: 118 FSLMVAAGS-----LDVLRVMSKATTVIAEGEVL-QLLYTGEVELTEQQYIEVVRAKTAV 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           L+  AC+ GAI+   S  +++ L  FG  LGI FQL DD+LD    EE+  K
Sbjct: 172 LLSAACQCGAILGGVSPEQEQALADFGMELGIAFQLMDDILDYTASEEEFGK 223


>gi|153207271|ref|ZP_01946035.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212218206|ref|YP_002304993.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
 gi|120576759|gb|EAX33383.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212012468|gb|ACJ19848.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
          Length = 332

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 20/234 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
             L   +Q + + +D ++   + + +SH+       L+  I + ++  GGK++R  +V  
Sbjct: 13  ESLRQPVQNDIEAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63

Query: 61  CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A             +   IE IH  +L+HDD+  +D    RRG+ T +  +    +++ 
Sbjct: 64  TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + AF+I++      + N+    +L+ T N   +G +  Q+++  D  IDE   + 
Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ DDLLD  +D
Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKD 229


>gi|295100831|emb|CBK98376.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii L2-6]
          Length = 296

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 85/229 (37%), Positives = 129/229 (56%), Gaps = 9/229 (3%)

Query: 10  QENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
            E  K+ D  L   +  L Q       + +D +  A RY+LLGG K+IR+ LV     + 
Sbjct: 4   AEYKKQYDEYLARAEKALNQACERYLPEGSD-VCRAARYSLLGGGKRIRAVLVLAVCDML 62

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           + N   A +  AA+E +HCYSLIHDDLP MDN  +RRGKP+ H  + E TA++AG+ LLT
Sbjct: 63  HGNAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDMRRGKPSCHKAFGESTAMLAGDVLLT 122

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKM 183
            AFE ++   T    ++      +L    G +GM+ GQ LD++ E +   E Q+ +I + 
Sbjct: 123 EAFEAVAGAPT--PASVCVHAAQALGAGAGSRGMVYGQELDLKYEALAAAEEQLRLIHRH 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTGAL+  A + G   A A + +++ L  +   +G++FQ+ DD+LD   
Sbjct: 181 KTGALINAAIQMGGAAAQADEVQRKALEAYAYGIGLVFQIVDDVLDVTG 229


>gi|58038726|ref|YP_190690.1| dimethylallyltransferase [Gluconobacter oxydans 621H]
 gi|58001140|gb|AAW60034.1| Dimethylallyltransferase [Gluconobacter oxydans 621H]
          Length = 301

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 101/239 (42%), Positives = 143/239 (59%), Gaps = 11/239 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            L   L      I++ +D LL      M       L+ A+RYA L GGK++R FL  E A
Sbjct: 9   SLKDALARACSEIESTIDTLLP-----MVPGDESVLIEAMRYAALGGGKRLRGFLAVEVA 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF  +   ALRV A++E +H YSL+HDDLPSMD+  +RRG+P+ H Q+DE  AI+AG+ 
Sbjct: 64  TLFGADRKAALRVAASVELLHAYSLVHDDLPSMDDDDLRRGQPSTHKQFDEAIAILAGDA 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
           L T AFEI+  P+T     +R+ L L+L    G  GM+GGQ++DI+ E   +   QV  +
Sbjct: 124 LQTRAFEILVEPETSPNATVRANLALALAQASGSAGMVGGQVIDIRGEGRALPLDQVRRL 183

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             +KTGAL+ +A ESGAI+A      +  +  +G +LG  FQ+ADD+LD     E+L K
Sbjct: 184 HALKTGALIRYAAESGAILADVDDARRAAIVAYGRDLGTAFQVADDVLDSTATAEELGK 242


>gi|146313257|ref|YP_001178331.1| octaprenyl diphosphate synthase [Enterobacter sp. 638]
 gi|145320133|gb|ABP62280.1| Trans-hexaprenyltranstransferase [Enterobacter sp. 638]
          Length = 323

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQGDAHVNIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  ++ ++  L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTEAQERGLQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219


>gi|241068508|ref|XP_002408454.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
 gi|215492442|gb|EEC02083.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
          Length = 345

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 63/216 (29%), Positives = 114/216 (52%), Gaps = 14/216 (6%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           IL+DL++          ++ L+  + +Y L  GGK+IR  L    A +F+      +++ 
Sbjct: 84  ILNDLIISCLK-----SDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGDNHIKLA 138

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           +A+E IH  +L+HDD+  +D+  +RR KPT +I +   T+I+ G+ L + +F+++ +  +
Sbjct: 139 SAVEFIHTATLLHDDV--VDDSTLRRFKPTANIIWGSKTSILVGDFLFSQSFKLMIASGS 196

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                I++  +L+    I  +G +   +   +   I   +   I K KT  L   +CE G
Sbjct: 197 -----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIEEYQQIVKSKTAELFGASCEVG 251

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AI+A    +  + ++ FG+ LG IFQ+ DDLLD   
Sbjct: 252 AIIAEQLDHVSKDMQDFGKLLGTIFQVIDDLLDYWG 287


>gi|313903572|ref|ZP_07836962.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466125|gb|EFR61649.1| Polyprenyl synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 331

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 17/231 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
           G +   ++ +   ++  +   L     H        ++    Y   GG K++R  LV   
Sbjct: 14  GAVFEPIRNDLAAVEVAIRRALDGPDPH--------IVELATYLQRGGGKRLRPALVLLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A  F  +    L V AA+E IH  +L+HDD+  +D    RRG PTV++++   TA++ G+
Sbjct: 66  ARNFQYDRERLLPVAAAVELIHMATLVHDDI--VDGATARRGLPTVNVRWGTGTAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   AF ++++         R   +++        G +  Q   + D    E   +   
Sbjct: 124 FLFARAFSLLAADGDN-----RVVQVMAEAVYEMSTGEIEQQ-AQLFDPSTGEEGYYRRI 177

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT   +   C  G +M  A++ + E LR +G  +G+ FQ+ DD+LD   
Sbjct: 178 YKKTAHFISHCCLMGGLMGGATEQQAEALRRYGYGIGMGFQVIDDILDLTG 228


>gi|123440796|ref|YP_001004787.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087757|emb|CAL10543.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 323

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A+++ A++ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|306816471|ref|ZP_07450603.1| octaprenyl diphosphate synthase [Escherichia coli NC101]
 gi|222034904|emb|CAP77647.1| Octaprenyl-diphosphate synthase [Escherichia coli LF82]
 gi|305850036|gb|EFM50495.1| octaprenyl diphosphate synthase [Escherichia coli NC101]
 gi|312947744|gb|ADR28571.1| octaprenyl diphosphate synthase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 323

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNVHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|16131077|ref|NP_417654.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24114476|ref|NP_708986.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301]
 gi|30064525|ref|NP_838696.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T]
 gi|74313724|ref|YP_312143.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046]
 gi|82545575|ref|YP_409522.1| octaprenyl diphosphate synthase [Shigella boydii Sb227]
 gi|89109950|ref|AP_003730.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           W3110]
 gi|110807053|ref|YP_690573.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401]
 gi|157155105|ref|YP_001464663.1| octaprenyl diphosphate synthase [Escherichia coli E24377A]
 gi|170018563|ref|YP_001723517.1| octaprenyl diphosphate synthase [Escherichia coli ATCC 8739]
 gi|170082722|ref|YP_001732042.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170765991|ref|ZP_02900802.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627]
 gi|188492215|ref|ZP_02999485.1| polyprenyl synthetase [Escherichia coli 53638]
 gi|194434492|ref|ZP_03066752.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012]
 gi|194439175|ref|ZP_03071256.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1]
 gi|209920662|ref|YP_002294746.1| octaprenyl diphosphate synthase [Escherichia coli SE11]
 gi|218555757|ref|YP_002388670.1| octaprenyl diphosphate synthase [Escherichia coli IAI1]
 gi|218696892|ref|YP_002404559.1| octaprenyl diphosphate synthase [Escherichia coli 55989]
 gi|218701956|ref|YP_002409585.1| octaprenyl diphosphate synthase [Escherichia coli IAI39]
 gi|218706807|ref|YP_002414326.1| octaprenyl diphosphate synthase [Escherichia coli UMN026]
 gi|238902289|ref|YP_002928085.1| octaprenyl diphosphate synthase [Escherichia coli BW2952]
 gi|253771979|ref|YP_003034810.1| octaprenyl diphosphate synthase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163129|ref|YP_003046237.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606]
 gi|256018894|ref|ZP_05432759.1| octaprenyl diphosphate synthase [Shigella sp. D9]
 gi|256024238|ref|ZP_05438103.1| octaprenyl diphosphate synthase [Escherichia sp. 4_1_40B]
 gi|260857314|ref|YP_003231205.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str.
           11368]
 gi|260869938|ref|YP_003236340.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str.
           11128]
 gi|291284561|ref|YP_003501379.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293406796|ref|ZP_06650722.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412]
 gi|298382537|ref|ZP_06992134.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302]
 gi|300817559|ref|ZP_07097775.1| polyprenyl synthetase [Escherichia coli MS 107-1]
 gi|300823848|ref|ZP_07103972.1| polyprenyl synthetase [Escherichia coli MS 119-7]
 gi|300897953|ref|ZP_07116330.1| polyprenyl synthetase [Escherichia coli MS 198-1]
 gi|300904377|ref|ZP_07122226.1| polyprenyl synthetase [Escherichia coli MS 84-1]
 gi|300918947|ref|ZP_07135503.1| polyprenyl synthetase [Escherichia coli MS 115-1]
 gi|300926070|ref|ZP_07141891.1| polyprenyl synthetase [Escherichia coli MS 182-1]
 gi|300929881|ref|ZP_07145324.1| polyprenyl synthetase [Escherichia coli MS 187-1]
 gi|300938101|ref|ZP_07152876.1| polyprenyl synthetase [Escherichia coli MS 21-1]
 gi|300948840|ref|ZP_07162906.1| polyprenyl synthetase [Escherichia coli MS 116-1]
 gi|300955774|ref|ZP_07168117.1| polyprenyl synthetase [Escherichia coli MS 175-1]
 gi|301022044|ref|ZP_07185986.1| polyprenyl synthetase [Escherichia coli MS 69-1]
 gi|301025932|ref|ZP_07189417.1| polyprenyl synthetase [Escherichia coli MS 196-1]
 gi|301301753|ref|ZP_07207887.1| polyprenyl synthetase [Escherichia coli MS 124-1]
 gi|301326382|ref|ZP_07219744.1| polyprenyl synthetase [Escherichia coli MS 78-1]
 gi|307139873|ref|ZP_07499229.1| octaprenyl diphosphate synthase [Escherichia coli H736]
 gi|307313108|ref|ZP_07592734.1| Trans-hexaprenyltranstransferase [Escherichia coli W]
 gi|309793766|ref|ZP_07688192.1| polyprenyl synthetase [Escherichia coli MS 145-7]
 gi|312968475|ref|ZP_07782684.1| polyprenyl synthetase family protein [Escherichia coli 2362-75]
 gi|312972539|ref|ZP_07786713.1| polyprenyl synthetase family protein [Escherichia coli 1827-70]
 gi|331643885|ref|ZP_08345016.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H736]
 gi|331648987|ref|ZP_08350075.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli M605]
 gi|331654791|ref|ZP_08355791.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli M718]
 gi|331670014|ref|ZP_08370859.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA271]
 gi|331679266|ref|ZP_08379938.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H591]
 gi|332279982|ref|ZP_08392395.1| octaprenyl diphosphate synthase [Shigella sp. D9]
 gi|83286883|sp|P0AD57|ISPB_ECOLI RecName: Full=Octaprenyl-diphosphate synthase; AltName:
           Full=All-trans-octaprenyl-diphosphate synthase; AltName:
           Full=Octaprenyl pyrophosphate synthase; Short=OPP
           synthase
 gi|83286884|sp|P0AD58|ISPB_SHIFL RecName: Full=Octaprenyl-diphosphate synthase; AltName:
           Full=All-trans-octaprenyl-diphosphate synthase; AltName:
           Full=Octaprenyl pyrophosphate synthase; Short=OPP
           synthase
 gi|606125|gb|AAA57988.1| ORF_o323 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789578|gb|AAC76219.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24053659|gb|AAN44693.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 301]
 gi|30042784|gb|AAP18507.1| octaprenyl diphosphate synthase [Shigella flexneri 2a str. 2457T]
 gi|73857201|gb|AAZ89908.1| octaprenyl diphosphate synthase [Shigella sonnei Ss046]
 gi|81246986|gb|ABB67694.1| octaprenyl diphosphate synthase [Shigella boydii Sb227]
 gi|85675981|dbj|BAE77231.1| octaprenyl diphosphate synthase [Escherichia coli str. K12 substr.
           W3110]
 gi|110616601|gb|ABF05268.1| octaprenyl diphosphate synthase [Shigella flexneri 5 str. 8401]
 gi|157077135|gb|ABV16843.1| octaprenyl-diphosphate synthase [Escherichia coli E24377A]
 gi|169753491|gb|ACA76190.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
 gi|169890557|gb|ACB04264.1| octaprenyl diphosphate synthase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170125137|gb|EDS94068.1| octaprenyl-diphosphate synthase [Escherichia albertii TW07627]
 gi|188487414|gb|EDU62517.1| polyprenyl synthetase [Escherichia coli 53638]
 gi|194417271|gb|EDX33380.1| octaprenyl-diphosphate synthase [Shigella dysenteriae 1012]
 gi|194421871|gb|EDX37877.1| octaprenyl-diphosphate synthase [Escherichia coli 101-1]
 gi|209758174|gb|ACI77399.1| octaprenyl diphosphate synthase [Escherichia coli]
 gi|209913921|dbj|BAG78995.1| octaprenyl-diphosphate synthase [Escherichia coli SE11]
 gi|218353624|emb|CAU99827.1| octaprenyl diphosphate synthase [Escherichia coli 55989]
 gi|218362525|emb|CAR00149.1| octaprenyl diphosphate synthase [Escherichia coli IAI1]
 gi|218371942|emb|CAR19798.1| octaprenyl diphosphate synthase [Escherichia coli IAI39]
 gi|218433904|emb|CAR14821.1| octaprenyl diphosphate synthase [Escherichia coli UMN026]
 gi|238861931|gb|ACR63929.1| octaprenyl diphosphate synthase [Escherichia coli BW2952]
 gi|242378730|emb|CAQ33520.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
 gi|253323023|gb|ACT27625.1| Trans-hexaprenyltranstransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975030|gb|ACT40701.1| octaprenyl diphosphate synthase [Escherichia coli B str. REL606]
 gi|253979186|gb|ACT44856.1| octaprenyl diphosphate synthase [Escherichia coli BL21(DE3)]
 gi|257755963|dbj|BAI27465.1| octaprenyl diphosphate synthase [Escherichia coli O26:H11 str.
           11368]
 gi|257766294|dbj|BAI37789.1| octaprenyl diphosphate synthase [Escherichia coli O111:H- str.
           11128]
 gi|260447786|gb|ACX38208.1| Polyprenyl synthetase [Escherichia coli DH1]
 gi|281180229|dbj|BAI56559.1| octaprenyl-diphosphate synthase [Escherichia coli SE15]
 gi|281602570|gb|ADA75554.1| Octaprenyl-diphosphate synthase [Shigella flexneri 2002017]
 gi|284923209|emb|CBG36303.1| octaprenyl-diphosphate synthase [Escherichia coli 042]
 gi|290764434|gb|ADD58395.1| hypothetical protein G2583_3912 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291426802|gb|EFE99834.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1412]
 gi|298277677|gb|EFI19193.1| octaprenyl diphosphate synthase [Escherichia coli FVEC1302]
 gi|299879904|gb|EFI88115.1| polyprenyl synthetase [Escherichia coli MS 196-1]
 gi|300317358|gb|EFJ67142.1| polyprenyl synthetase [Escherichia coli MS 175-1]
 gi|300358334|gb|EFJ74204.1| polyprenyl synthetase [Escherichia coli MS 198-1]
 gi|300397718|gb|EFJ81256.1| polyprenyl synthetase [Escherichia coli MS 69-1]
 gi|300403684|gb|EFJ87222.1| polyprenyl synthetase [Escherichia coli MS 84-1]
 gi|300413928|gb|EFJ97238.1| polyprenyl synthetase [Escherichia coli MS 115-1]
 gi|300417874|gb|EFK01185.1| polyprenyl synthetase [Escherichia coli MS 182-1]
 gi|300451683|gb|EFK15303.1| polyprenyl synthetase [Escherichia coli MS 116-1]
 gi|300456907|gb|EFK20400.1| polyprenyl synthetase [Escherichia coli MS 21-1]
 gi|300462199|gb|EFK25692.1| polyprenyl synthetase [Escherichia coli MS 187-1]
 gi|300523616|gb|EFK44685.1| polyprenyl synthetase [Escherichia coli MS 119-7]
 gi|300529857|gb|EFK50919.1| polyprenyl synthetase [Escherichia coli MS 107-1]
 gi|300842734|gb|EFK70494.1| polyprenyl synthetase [Escherichia coli MS 124-1]
 gi|300846914|gb|EFK74674.1| polyprenyl synthetase [Escherichia coli MS 78-1]
 gi|306907019|gb|EFN37527.1| Trans-hexaprenyltranstransferase [Escherichia coli W]
 gi|308122723|gb|EFO59985.1| polyprenyl synthetase [Escherichia coli MS 145-7]
 gi|309703613|emb|CBJ02953.1| octaprenyl-diphosphate synthase [Escherichia coli ETEC H10407]
 gi|310334916|gb|EFQ01121.1| polyprenyl synthetase family protein [Escherichia coli 1827-70]
 gi|312286693|gb|EFR14604.1| polyprenyl synthetase family protein [Escherichia coli 2362-75]
 gi|313648570|gb|EFS13012.1| polyprenyl synthetase family protein [Shigella flexneri 2a str.
           2457T]
 gi|315062493|gb|ADT76820.1| octaprenyl diphosphate synthase [Escherichia coli W]
 gi|315137773|dbj|BAJ44932.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|315257114|gb|EFU37082.1| polyprenyl synthetase [Escherichia coli MS 85-1]
 gi|315617270|gb|EFU97879.1| polyprenyl synthetase family protein [Escherichia coli 3431]
 gi|320174552|gb|EFW49688.1| Octaprenyl-diphosphate synthase [Shigella dysenteriae CDC 74-1112]
 gi|320181462|gb|EFW56380.1| Octaprenyl-diphosphate synthase [Shigella boydii ATCC 9905]
 gi|320186674|gb|EFW61398.1| Octaprenyl-diphosphate synthase [Shigella flexneri CDC 796-83]
 gi|320194672|gb|EFW69302.1| Octaprenyl-diphosphate synthase [Escherichia coli WV_060327]
 gi|320202101|gb|EFW76676.1| Octaprenyl-diphosphate synthase [Escherichia coli EC4100B]
 gi|320656246|gb|EFX24158.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661936|gb|EFX29344.1| octaprenyl diphosphate synthase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|323154401|gb|EFZ40602.1| polyprenyl synthetase family protein [Escherichia coli EPECa14]
 gi|323165148|gb|EFZ50938.1| polyprenyl synthetase family protein [Shigella sonnei 53G]
 gi|323173553|gb|EFZ59182.1| polyprenyl synthetase family protein [Escherichia coli LT-68]
 gi|323178637|gb|EFZ64213.1| polyprenyl synthetase family protein [Escherichia coli 1180]
 gi|323183141|gb|EFZ68539.1| polyprenyl synthetase family protein [Escherichia coli 1357]
 gi|323189192|gb|EFZ74476.1| polyprenyl synthetase family protein [Escherichia coli RN587/1]
 gi|323376919|gb|ADX49187.1| Polyprenyl synthetase [Escherichia coli KO11]
 gi|323936119|gb|EGB32413.1| polyprenyl synthetase [Escherichia coli E1520]
 gi|323941713|gb|EGB37892.1| polyprenyl synthetase [Escherichia coli E482]
 gi|323946959|gb|EGB42975.1| polyprenyl synthetase [Escherichia coli H120]
 gi|323970250|gb|EGB65521.1| polyprenyl synthetase [Escherichia coli TA007]
 gi|323979096|gb|EGB74174.1| polyprenyl synthetase [Escherichia coli TW10509]
 gi|324018330|gb|EGB87549.1| polyprenyl synthetase [Escherichia coli MS 117-3]
 gi|324119552|gb|EGC13434.1| polyprenyl synthetase [Escherichia coli E1167]
 gi|330909241|gb|EGH37755.1| octaprenyl-diphosphate synthase [Escherichia coli AA86]
 gi|331037356|gb|EGI09580.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H736]
 gi|331042734|gb|EGI14876.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli M605]
 gi|331048173|gb|EGI20250.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli M718]
 gi|331062927|gb|EGI34841.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA271]
 gi|331073331|gb|EGI44654.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli H591]
 gi|332086238|gb|EGI91396.1| polyprenyl synthetase family protein [Shigella boydii 5216-82]
 gi|332086522|gb|EGI91669.1| polyprenyl synthetase family protein [Shigella dysenteriae 155-74]
 gi|332090693|gb|EGI95787.1| polyprenyl synthetase family protein [Shigella boydii 3594-74]
 gi|332102334|gb|EGJ05680.1| octaprenyl diphosphate synthase [Shigella sp. D9]
 gi|332345144|gb|AEE58478.1| polyprenyl synthetase [Escherichia coli UMNK88]
 gi|332752346|gb|EGJ82736.1| polyprenyl synthetase family protein [Shigella flexneri 4343-70]
 gi|332752872|gb|EGJ83257.1| polyprenyl synthetase family protein [Shigella flexneri K-671]
 gi|332754473|gb|EGJ84839.1| polyprenyl synthetase family protein [Shigella flexneri 2747-71]
 gi|332765183|gb|EGJ95410.1| octaprenyl-diphosphate synthase [Shigella flexneri 2930-71]
 gi|332998829|gb|EGK18425.1| polyprenyl synthetase family protein [Shigella flexneri VA-6]
 gi|332999266|gb|EGK18852.1| polyprenyl synthetase family protein [Shigella flexneri K-272]
 gi|333000017|gb|EGK19600.1| polyprenyl synthetase family protein [Shigella flexneri K-218]
 gi|333014533|gb|EGK33880.1| polyprenyl synthetase family protein [Shigella flexneri K-304]
 gi|333014990|gb|EGK34334.1| polyprenyl synthetase family protein [Shigella flexneri K-227]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|217974480|ref|YP_002359231.1| polyprenyl synthetase [Shewanella baltica OS223]
 gi|217499615|gb|ACK47808.1| Polyprenyl synthetase [Shewanella baltica OS223]
          Length = 331

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVSYEGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       D+++   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSMKVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAGVLAGATLEQETALGNYGKYLGTAFQLTDDLL 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYTAD 227


>gi|108563335|ref|YP_627651.1| geranyltranstransferase [Helicobacter pylori HPAG1]
 gi|107837108|gb|ABF84977.1| geranyltranstransferase [Helicobacter pylori HPAG1]
          Length = 303

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238


>gi|77166478|ref|YP_345003.1| trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707]
 gi|76884792|gb|ABA59473.1| Trans-hexaprenyltranstransferase [Nitrosococcus oceani ATCC 19707]
          Length = 345

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 19/226 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           DL+      +      RL S +        Y +  GGK++R  +V   A  F       +
Sbjct: 31  DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 90

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A IE IH  +L+HDD+  +D+  +RRG+ T +  +    +++ G+ L + AFE++  
Sbjct: 91  DIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 148

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D++R   +L+ T N   +G +  Q+L+  +    E     I + KT  L   A 
Sbjct: 149 -----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 202

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + GA++ H    E++ +  +G +LG  FQL DD+LD     EDL K
Sbjct: 203 QLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 248


>gi|283788174|ref|YP_003368039.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168]
 gi|282951628|emb|CBG91328.1| octaprenyl-diphosphate synthase [Citrobacter rodentium ICC168]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  S  +++ L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCSDAQEKGLQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219


>gi|242310626|ref|ZP_04809781.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT
           98-5489]
 gi|239523024|gb|EEQ62890.1| geranylgeranyl pyrophosphate synthase [Helicobacter pullorum MIT
           98-5489]
          Length = 288

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 5/227 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV- 67
           +++N + I    +  L+  A  + + H     +       GGK+ R  L+      +   
Sbjct: 1   MRKNLQSIFGEFETYLISQAPKVPSFHPYFEKALWEMVENGGKRFRPKLLLSIVDAYKPK 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A     A+E +H YSLIHDDLP+MDN  +RRG  T+H +YDE  AI+ G+ L T++
Sbjct: 61  SIQKAFSSALALEILHTYSLIHDDLPAMDNADLRRGAQTLHCKYDECGAILIGDALNTHS 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F  I++ K  LK  I+++L+  L++N G+ GM+ GQ LD   E   +    +  I   KT
Sbjct: 121 FYCIATSK--LKPKIKNKLIKILSYNGGIYGMVLGQALDCYFEKQTLPLKDLRTIHLNKT 178

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             L+  + + G I+A   +   + L   G +LG+ FQ+ DD++D  +
Sbjct: 179 AKLIAASLQMGGIIAKCDKTTCKTLYKIGLDLGLFFQIRDDIIDATQ 225


>gi|187730997|ref|YP_001881898.1| octaprenyl diphosphate synthase [Shigella boydii CDC 3083-94]
 gi|187427989|gb|ACD07263.1| octaprenyl-diphosphate synthase [Shigella boydii CDC 3083-94]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|332291452|ref|YP_004430061.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169538|gb|AEE18793.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 324

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 12/215 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
            +     H   +    L   I Y L LGGK++R  L      LF  +H  AL    AIE 
Sbjct: 11  FIDYLNKHTLEKEPKNLYDPINYILGLGGKRLRPVLTLMACELFEKDHAIALDAALAIEI 70

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
            H +SL+HDD+  MD+  +RRGK TVH ++D  T I++G+ +L  A+++  + +      
Sbjct: 71  FHNFSLVHDDI--MDDAPLRRGKETVHEKWDINTGILSGDAMLIRAYQLFENYEGDTFKE 128

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAI 198
                 L+   +     +  GQ  D+  E  D+    +   + + KT  L+  A + GAI
Sbjct: 129 ------LAKLFSKTAIEVCEGQQYDVDFETRDDVTIPEYMKMIEYKTAVLVGAALKMGAI 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +A AS+  +E +  +G +LG+ FQL DD LD   D
Sbjct: 183 VAGASKTCQEAIYNYGRDLGLAFQLQDDYLDAFGD 217


>gi|157162671|ref|YP_001459989.1| octaprenyl diphosphate synthase [Escherichia coli HS]
 gi|157068351|gb|ABV07606.1| octaprenyl-diphosphate synthase [Escherichia coli HS]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVISEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|157825829|ref|YP_001493549.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford]
 gi|157799787|gb|ABV75041.1| octaprenyl-diphosphate synthase [Rickettsia akari str. Hartford]
          Length = 327

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 66/225 (29%), Positives = 119/225 (52%), Gaps = 14/225 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLF 65
           K+Q++ K   T L+DL++          ++ L+  + +Y L  GGK+IR  L    A +F
Sbjct: 6   KIQQDLKDEVTKLNDLIISCLK-----SDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 61  DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +F+++ +  +     I++  +L+    I   G +   +   +   I   + + I K KT
Sbjct: 119 QSFKLMVASGS-----IKAMNVLAKASAIISVGEVIQLVKLNERRIITIEEYYQIVKSKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             L   +CE GAI+A    +  + +R FG  LG IFQ+ DDLLD 
Sbjct: 174 AELFGASCEVGAIIAEQVDHISKDIRYFGTLLGTIFQVIDDLLDY 218


>gi|323961158|gb|EGB56772.1| polyprenyl synthetase [Escherichia coli H489]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|226198039|ref|ZP_03793611.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
 gi|225929915|gb|EEH25930.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
          Length = 344

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
           +   ++ +  LD +L      +       L +A+RYA+ GG K++R  L      L + +
Sbjct: 56  KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 110

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V A IE IH +SLI DDLP+MDN  +R G+ T+H QYD  TA++A +GL++ AF
Sbjct: 111 REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 170

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186
             +S     L  ++R  LM  L  +IG  G+ GGQ +D+      +D T++  + +MKTG
Sbjct: 171 LALSEAPLPL--DVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTG 228

Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLDCEE 232
           AL+  A   G +       E       +  +GE LG+ +Q+ DD+LD   
Sbjct: 229 ALIRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTA 278


>gi|170683435|ref|YP_001745459.1| octaprenyl diphosphate synthase [Escherichia coli SMS-3-5]
 gi|170521153|gb|ACB19331.1| octaprenyl-diphosphate synthase [Escherichia coli SMS-3-5]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|331664800|ref|ZP_08365705.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA143]
 gi|331058048|gb|EGI30030.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Escherichia
           coli TA143]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|271499159|ref|YP_003332184.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586]
 gi|270342714|gb|ACZ75479.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech586]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALNYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI++ AS  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQSSAILSDASSEQELALQEYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|82778501|ref|YP_404850.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197]
 gi|309785515|ref|ZP_07680146.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617]
 gi|81242649|gb|ABB63359.1| octaprenyl diphosphate synthase [Shigella dysenteriae Sd197]
 gi|308926635|gb|EFP72111.1| polyprenyl synthetase family protein [Shigella dysenteriae 1617]
          Length = 323

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   NI  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNIIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|89099139|ref|ZP_01172018.1| HepT [Bacillus sp. NRRL B-14911]
 gi|89086269|gb|EAR65391.1| HepT [Bacillus sp. NRRL B-14911]
          Length = 320

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 11/232 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     +D+ ++ +       +Q +      +++     GGK+IR   V   A   + 
Sbjct: 2   KLKMMYSFLDSDINIIEQSLEETVQAESPLLRNASMHLLQAGGKRIRPVFVLLSAKFGSY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +     +V  A+E IH  SL+HDD+  +D+  +RRGKPT+  ++D  TA+  G+ +   +
Sbjct: 62  DISEIKKVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRTAMYTGDYIFAKS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E+++  +      I ++ ++ +            Q+ D      +     +  K KT  
Sbjct: 120 LEVMTEIERPEAHEILAKTIVEVCVGEI------EQIKDKYRFDQNLRDYLLRIKRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +C+ GA+ A   ++  ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 174 LIAASCQLGAVAAGVDESIHKKLYKFGYYVGMSFQITDDILDFTGTEKELGK 225


>gi|270295967|ref|ZP_06202167.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273371|gb|EFA19233.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 324

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 19/229 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  +RI++ + +L         T+    L + + Y L +GGK+IR  L+    +L+  + 
Sbjct: 6   ELLERINSHIAEL-------QFTRTPQGLYAPVTYVLSMGGKRIRPVLMLMAYNLYQEDI 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                    IE  H Y+L+HDDL  MD    RRGK TVH  +D+  AI++G+ +L  A++
Sbjct: 59  TRIFNPATGIEVYHNYTLLHDDL--MDRADRRRGKETVHKVWDDNAAILSGDAMLVLAYQ 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186
            ++    +    +          ++    +  GQ LD++ E   +    +   + ++KT 
Sbjct: 117 FMAQCPVEHLKEV------MDIFSLTALEICEGQQLDMEFEHRKDVKAEEYLEMIRLKTS 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L+  + + GA++  AS  + E+L  FG NLG+ FQL DD LD   D  
Sbjct: 171 VLLAASLKIGALLGGASSEDAEQLYDFGMNLGVAFQLKDDFLDIYGDAA 219


>gi|261345175|ref|ZP_05972819.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541]
 gi|282566867|gb|EFB72402.1| octaprenyl-diphosphate synthase [Providencia rustigianii DSM 4541]
          Length = 323

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          +     +V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAILAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+A+A+  +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPNITEENYMQVIYSKTARLFEAASHASAILANATPAQEKALQDYGRYIGTAFQLVDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|289209165|ref|YP_003461231.1| trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix]
 gi|288944796|gb|ADC72495.1| Trans-hexaprenyltranstransferase [Thioalkalivibrio sp. K90mix]
          Length = 322

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 18/231 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
            ++ + +D  + D L      +    +  + S       GGK++R  L T  A    V  
Sbjct: 11  ADDMQAVDQCIRDRLSSPVVLINQLGHYIIHS-------GGKRLRPLLATLSARACAVEG 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              + + A +E IH  +L+HDD+  +D   +RRG  T +  +    A++ G+ L + AFE
Sbjct: 64  DEPVVLAAVVEFIHTATLLHDDV--VDASEMRRGNETANHIFGNEAAVLVGDFLYSRAFE 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++    +     +R   +L+   N+  +G +  Q+++  D  +DE +   + + KT  L 
Sbjct: 122 MMVEVGS-----MRVMEILAHATNVIAEGEVM-QLMNCHDADVDEARYMNVIQSKTAKLF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
             AC+ GAI+    + E+E L  +G +LG  FQL DD+LD   D     K+
Sbjct: 176 EAACQLGAILGERPRAEEESLAHYGMHLGTAFQLIDDVLDYSSDDAVTGKR 226


>gi|83590100|ref|YP_430109.1| trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC
           39073]
 gi|83573014|gb|ABC19566.1| Trans-hexaprenyltranstransferase [Moorella thermoacetica ATCC
           39073]
          Length = 322

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 14/225 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +  +  +LL Q  +      +  L  A R+ +  GGK++R       A      
Sbjct: 8   QEVQADLQQVEAELLRQVDAP-----DPVLSQAARHLVQAGGKRLRPAFAILAARCCGAP 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L +  A+E IH  +L+HDD+  +D   IRRG+PTV  ++ +  ++  G+ L   + 
Sbjct: 63  LERILPLAVALEMIHMATLVHDDV--IDASPIRRGRPTVWARWGQELSLHTGDYLFARSL 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            ++++      D+ R   +L+      +QG +  QM    D  I           KT  L
Sbjct: 121 ILVATY-----DDPRIPSVLASVSVKMVQGEI-QQMAAAFDLDITLRDYLDRIYRKTALL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +CE GAI A A       LR +G NLG+ FQ+ DD+LD   D
Sbjct: 175 IAASCELGAIAAGADTATIRHLRYYGRNLGLAFQITDDVLDMVAD 219


>gi|332160062|ref|YP_004296639.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318607378|emb|CBY28876.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664292|gb|ADZ40936.1| octaprenyl diphosphate synthase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862049|emb|CBX72215.1| octaprenyl-diphosphate synthase [Yersinia enterocolitica W22703]
          Length = 323

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A+++ A++ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLSDATEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|183219510|ref|YP_001837506.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909652|ref|YP_001961207.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774328|gb|ABZ92629.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777932|gb|ABZ96230.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 307

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 83/251 (33%), Positives = 129/251 (51%), Gaps = 24/251 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV- 58
           M     S L ++ +  D+  +    +  S        R+  A  Y+L  GGK++R   V 
Sbjct: 1   MPNSFESILLKSKQVFDSFFESYTAKLFSP-----KTRITEACLYSLHAGGKRVRPIFVI 55

Query: 59  --------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
                      +  F+  H +      A+ECIH YSLIHDDLP+MDN   RRGKPT H Q
Sbjct: 56  NSFFEPNDLFSSEPFD-THQSVFLAALAVECIHTYSLIHDDLPAMDNDDTRRGKPTCHKQ 114

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +DE TAI+AG+ L + +F+++S       + +R   +  L    G+ GM+ GQM DI++E
Sbjct: 115 FDEATAILAGDTLNSLSFQLLSMMDANDPNLLR-DSIQILHQGAGMTGMILGQMEDIEEE 173

Query: 171 -----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLA 224
                   E+++  I + KTGAL+  +   G  +  A   E+E  L  + + +G++FQ+ 
Sbjct: 174 KNPSSNARESKLESIHEKKTGALITSSFLLGNRL-RADWKEREFVLTRYAKEIGLLFQIT 232

Query: 225 DDLLDCEEDLP 235
           DD+LD E +L 
Sbjct: 233 DDILDVEGNLA 243


>gi|317011137|gb|ADU84884.1| geranyltranstransferase [Helicobacter pylori SouthAfrica7]
          Length = 303

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL------T 71
              +  L     H+++ H     +     L GGK+ R  L                    
Sbjct: 14  ERFESFLKNHHPHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALAGKKDYLNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--LLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E    L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGLVASGNKDEELFRWLQDFGLKMGLCFQVLDDIIDVTQDEK 238


>gi|219852944|ref|YP_002467376.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c]
 gi|219547203|gb|ACL17653.1| Polyprenyl synthetase [Methanosphaerula palustris E1-9c]
          Length = 320

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 17/231 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   L++   ++D ++D         +       L         GGK++R  ++   A 
Sbjct: 2   ELIEYLEKVGNQVDRLIDRYFGDPVGELNKASAHLL-------TAGGKRLRPAVMMLAAD 54

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +    +    A+E  H ++LIHDD+  MD   +RRG PTV+ ++DE TAI+AG+ 
Sbjct: 55  AVRKGSSDDLMPAAIALELTHSFTLIHDDI--MDGDEVRRGVPTVNKKWDEPTAILAGDV 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFM 179
           L   AF  I          +R+  ML     +  + +  GQ LD+  E  D   E +   
Sbjct: 113 LYARAFAFICQALAMDAAKLRAVSML----AVTCEEICAGQHLDMAFEDRDDVSEEEYLE 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   KTGAL   +   G ++A  SQ + + L  +G N+G+ FQ+ DDL+D 
Sbjct: 169 MVGKKTGALYAASTAMGGVLAGGSQPQVDALYRYGMNIGVAFQIQDDLIDL 219


>gi|183601043|ref|ZP_02962536.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827]
 gi|188019381|gb|EDU57421.1| hypothetical protein PROSTU_04664 [Providencia stuartii ATCC 25827]
          Length = 305

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 86/231 (37%), Positives = 130/231 (56%), Gaps = 10/231 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN 68
           Q+  +R++  L + L           +  L +A+++ ALLGGK++R FL     S+  V+
Sbjct: 14  QQAYERVNQYLLNALDAL-----PFSDLPLAAAMKHGALLGGKRLRPFLTYTVGSMLGVD 68

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            +      AA+ECIH YSLIHDDLP+MD+  +RRG+PT HI++ E  AI+AG+ L T AF
Sbjct: 69  SVNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEGNAILAGDALQTLAF 128

Query: 129 EIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           +++SS +   + D  R  ++  L +  GL GM GGQ LD++ E   +D   +  I + KT
Sbjct: 129 QLLSSAEMPDVTDKDRIAMLSELAYASGLAGMCGGQALDLEAEGKRVDLAALERIHQHKT 188

Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A   GA  A          L  + E++G+ FQ+ DD+LD   D  
Sbjct: 189 GALIRAAIRMGAYAAGIKGHKALPALDKYAESIGLAFQVQDDILDVIGDSE 239


>gi|253702068|ref|YP_003023257.1| trans-hexaprenyltranstransferase [Geobacter sp. M21]
 gi|251776918|gb|ACT19499.1| Trans-hexaprenyltranstransferase [Geobacter sp. M21]
          Length = 322

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 10/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +      I   L ++ LQ    +Q+     +     Y L  GGK+IR  LV   + L   
Sbjct: 1   MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALVLLASRLCGY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   ++ + + +E IH  +L+HDD+  +DN  +RRG  + +  +    +++ G+ L + +
Sbjct: 60  DGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++ +       ++R   +L+    I  +G +  Q++   D  I   +   + + KT  
Sbjct: 118 FSLMVTDG-----DLRILKVLADATTIIAEGEVL-QLVCTCDLDITVERYIEVVRSKTAI 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  ACE GAI+  A    ++ L  +G +LGI FQL DD LD   
Sbjct: 172 LLSAACEVGAILGEADPEHRQALADYGMDLGIAFQLMDDTLDYTA 216


>gi|167754003|ref|ZP_02426130.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216]
 gi|167658628|gb|EDS02758.1| hypothetical protein ALIPUT_02290 [Alistipes putredinis DSM 17216]
          Length = 337

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 18/242 (7%)

Query: 2   NGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           N   PS    +N+ +I   ++  L Q       +   RL + I Y+L + GK++R  L+ 
Sbjct: 6   NDSYPSDFSMQNNDQILEAIEHYLGQIGY---PEEPGRLYAPISYSLTMSGKRLRPMLLM 62

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +F+     A+   AA+E  H ++L+HDD+  MDN  +RRG P+V  ++ +  AI++
Sbjct: 63  LTCGIFSDQPQAAMPAAAAVEVFHNFTLLHDDI--MDNAAMRRGNPSVFAKWGQNVAILS 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           G+ +L  A+ ++S    Q+   I ++       N     +  GQ  D+  E    +   +
Sbjct: 121 GDAMLISAYRLLSEYPPQVLPQILARF------NTMAIEVCEGQQYDMDFETRESVSVEE 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--L 234
              + ++KT AL+  A   GAI+  A + + +RL  F   LG+ FQL DDLLD   D  L
Sbjct: 175 YLHMIELKTSALLSGATVIGAIIGGAGEEDCQRLYRFATELGLAFQLQDDLLDSYGDERL 234

Query: 235 PK 236
            K
Sbjct: 235 GK 236


>gi|317180223|dbj|BAJ58009.1| geranyltranstransferase [Helicobacter pylori F32]
          Length = 303

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 122/231 (52%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  ERFESFLNHYHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+    L+  I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSNA--LLESRIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQDFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|258514531|ref|YP_003190753.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM
           771]
 gi|257778236|gb|ACV62130.1| Trans-hexaprenyltranstransferase [Desulfotomaculum acetoxidans DSM
           771]
          Length = 323

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 11/231 (4%)

Query: 9   LQENSKRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
           +++  K  + I DDL +++   +   Q  D LL+     LL  GGK++R          +
Sbjct: 1   MRQLLKLFNEIKDDLKIVEQELYQVVQTPDALLTETSVHLLNAGGKRLRPAFCLLGGKFY 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N +    L +  A+E IH  SL+HDD+  +D    RRG PTV  ++    ++  G+ L  
Sbjct: 61  NYDIKKLLPLAVALELIHMASLVHDDV--VDASMTRRGMPTVKAKWGNRISVHVGDYLFA 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +  +ISS K  L   + S   + ++           Q+    +        F   K KT
Sbjct: 119 KSLILISSYKEPLITRVLSDTSVKMSEGEI------QQISTSFNVNQYLKDYFYRIKRKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             L+  +C+ GA+   A +     L  +G  +G+ FQ+ DD+LD   +  K
Sbjct: 173 ALLISASCQLGAVACGAPKEIYLPLNRYGHYIGMAFQITDDILDMVANKNK 223


>gi|217033116|ref|ZP_03438579.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128]
 gi|298736116|ref|YP_003728641.1| geranyltranstransferase IspA [Helicobacter pylori B8]
 gi|216945159|gb|EEC23852.1| hypothetical protein HPB128_8g7 [Helicobacter pylori B128]
 gi|298355305|emb|CBI66177.1| geranyltranstransferase (IspA) [Helicobacter pylori B8]
          Length = 303

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV-----NHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--LLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +   ++   + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGLVASGIKNEELLKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238


>gi|261838303|gb|ACX98069.1| geranyltranstransferase [Helicobacter pylori 51]
          Length = 303

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 122/231 (52%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  ERFESFLNHHHL----HLESFHPYFEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+  + L+  I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSN--SLLESPIIVELIKILSVNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +     E  + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238


>gi|213021975|ref|ZP_03336422.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 226

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   +
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAE 219


>gi|144898411|emb|CAM75275.1| Polyprenyl synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 346

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 115/231 (49%), Gaps = 17/231 (7%)

Query: 3   GGLPSKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
             L S ++++ ++++ TI+D +       +  Q    +++A      GGK++R  L    
Sbjct: 26  DTLVSLVKDDLEKVNRTIIDRMHSPV--ELIPQLAGHIIAA------GGKRLRPVLTLAS 77

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L   +    +++ A +E IH  +L+HDD+  +D   +RRG+ + +  +    +++ G+
Sbjct: 78  AKLAGHSGERHVKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGD 135

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + +FE++    +     +    +LS   ++  +G +  Q++   D    E     + 
Sbjct: 136 FLFSRSFELMVEDGS-----LPVLAILSRASSVIAEGEVL-QLITANDTDTSEDSYLEVI 189

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KT AL   AC  GAI+A   + E++ L  +G NLGI FQL DD+LD   
Sbjct: 190 RSKTAALFAAACRIGAIVADRPKAEEDALDSYGLNLGIAFQLIDDVLDYSA 240


>gi|88801902|ref|ZP_01117430.1| putative isoprenoid biosynthesis related protein [Polaribacter
           irgensii 23-P]
 gi|88782560|gb|EAR13737.1| putative isoprenoid biosynthesis related protein [Polaribacter
           irgensii 23-P]
          Length = 340

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 13/220 (5%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
            + L    S         L   I Y L LGGK+IR  L    + +F+ +   AL    A+
Sbjct: 25  KEFLTYLESKNWIHEPKNLYEPIDYILKLGGKRIRPVLTLMVSDIFSGDFKKALPAALAV 84

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H ++L+HDD+  MD   +RRGKPTVH ++D    I++G+ +L  A++   +  + + 
Sbjct: 85  EVFHNFTLVHDDI--MDAAPLRRGKPTVHEKWDTNRGILSGDAMLILAYQYFENYDSIVF 142

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESG 196
                   L+   +     +  GQ LD+  E    +   +   + ++KT  L+  A + G
Sbjct: 143 LK------LAKLFSKTALEVCDGQQLDVDFETRSNVTIPEYINMIRLKTSVLVAAALKMG 196

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AI+A  S    + +  FG NLG+ FQL DD LD   D PK
Sbjct: 197 AIVAETSDENAQLIYDFGLNLGLAFQLQDDYLDTFGD-PK 235


>gi|188527752|ref|YP_001910439.1| geranyltranstransferase [Helicobacter pylori Shi470]
 gi|188143992|gb|ACD48409.1| geranyltranstransferase [Helicobacter pylori Shi470]
 gi|308063758|gb|ADO05645.1| geranyltranstransferase [Helicobacter pylori Sat464]
          Length = 303

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSSQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGFVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|109897645|ref|YP_660900.1| polyprenyl synthetase [Pseudoalteromonas atlantica T6c]
 gi|109699926|gb|ABG39846.1| farnesyl-diphosphate synthase [Pseudoalteromonas atlantica T6c]
          Length = 296

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 9/236 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
            +   KR+   +D LL      +   H   L +A++YALL GGK++R FLV        +
Sbjct: 3   FETQQKRVHQHVDALLQAQIGKLG-DHAPTLKNAMQYALLMGGKRMRPFLVYAVGEALGI 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                     A+ECIH YSL+HDDLP+MD+  +RRG PT HIQ+DE  AI+AG+ L T A
Sbjct: 62  EQSDLDAPALALECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTLA 121

Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
           FEII + P +   +  R +L+  L    G  GM GGQ +D    ++ I +TQ+ ++   K
Sbjct: 122 FEIIVNYPLSDFANAQRIELVRILGQASGYDGMCGGQGIDLASTNKLITQTQLELLHSKK 181

Query: 185 TGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           TGAL+  A +  +++    S   K  L+ +   +G+ FQ+ DD+LD   D   L K
Sbjct: 182 TGALITAAVKMASVLCPSVSDESKSLLQQYASTIGLAFQVQDDILDVVGDSQTLGK 237


>gi|329848574|ref|ZP_08263602.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
           C19]
 gi|328843637|gb|EGF93206.1| polyprenyl synthetase family protein [Asticcacaulis biprosthecum
           C19]
          Length = 339

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 14/211 (6%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           +Q+   +     D L++A      GGK++R  L    A L  V +    ++ AA+E IH 
Sbjct: 40  MQSEVAVIPALADHLIAA------GGKRLRPLLCVAAARLCEVRNDNHHKLSAAVEFIHT 93

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D+  +RRGK   H+ +   ++++ G+ L   AFE++    +     +R+
Sbjct: 94  ATLLHDDV--VDSSSLRRGKVAAHLIWGAPSSVLVGDFLFARAFELMVETGS-----LRA 146

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             +LS    +  QG +  Q++   D  + +     I   KT AL   A ESGA+ A AS+
Sbjct: 147 LDILSKASAVITQGEVL-QLMKAFDLNLSQADYIEIISSKTAALFSAASESGAVAAGASE 205

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++   L  +G NLG+ FQ+ DD+LD + D  
Sbjct: 206 DKITALYSYGLNLGLAFQIQDDVLDYQGDAA 236


>gi|315181275|gb|ADT88189.1| octaprenyl-diphosphate synthase [Vibrio furnissii NCTC 11218]
          Length = 396

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE  H  +L+HDD+  +D   +RRGK T +
Sbjct: 116 GGKRLRPLLAVLSAKALGYQGQGHTLAAAFIEFTHTATLLHDDV--VDESDMRRGKATAN 173

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++    +     ++   ++S   N+  +G +  Q+++  
Sbjct: 174 AAFGNAASVLVGDYIYTRSFQMMVELGS-----MKILQLMSEAVNVIAEGEV-QQLMNCN 227

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+A AS   +  L+ +G+ LG  FQL DD++
Sbjct: 228 DPDTTEASYMQVIYSKTARLFEAATQIGAILADASPEIETALQNYGKYLGTAFQLIDDVM 287

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 288 DYTAD-GKE 295


>gi|194335564|ref|YP_002017358.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308041|gb|ACF42741.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 337

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 14/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           M+  L  +L EN  R+   L  +     +    +    L +  RY L G GK+IR FL  
Sbjct: 6   MHEALTQELVENKYRL--YLSRINSALGNCFVRESPITLYAPARYILEGKGKRIRPFLTL 63

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             +     +   AL V  A+E +H ++LIHDD+  MD   +R G+PTVH +++   AI+ 
Sbjct: 64  LASEAVCGSSEHALNVALAVEILHNFTLIHDDI--MDQAELRHGRPTVHRRWNTNAAILT 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQ 176
           G+ ++ YA+E+    +++          L    N     +  GQ LDI+ E         
Sbjct: 122 GDMMIAYAYELALEAQSERHGE------LVHILNDANITICEGQALDIELEEKNDATIAD 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +   KTG L+  A E+G +   A+  +   L  FGE +G  FQ+ DD LD   +  K
Sbjct: 176 YLDMIAKKTGRLISAALEAGGVAGDATDEQLRSLVLFGEKIGQAFQIQDDYLDIMAEDGK 235


>gi|319892507|ref|YP_004149382.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162203|gb|ADV05746.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 293

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 91/240 (37%), Positives = 134/240 (55%), Gaps = 15/240 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   L++ +  ++  ++D          +Q    L  ++RY+L  GGK+IR  L+ 
Sbjct: 1   MNQSLNELLEQFNGHLNHAIED----------SQLGTSLEQSMRYSLEAGGKRIRPLLML 50

Query: 60  ECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               + +     + + V  A+E IH YSLIHDDLP+MD+  +RRGKPT H  Y E  AI+
Sbjct: 51  ATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAIL 110

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           AG+ LLT AFE I+   T +   I+  L+  ++   G QGM+GGQ LD+Q E   I   +
Sbjct: 111 AGDALLTKAFEKIA-LTTHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEK 169

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I   KTGAL+ FA E+  I+    Q   ++L  F ++LG+IFQ+ DDLLD   +  K
Sbjct: 170 LESIHIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDVYGNEAK 229


>gi|304316531|ref|YP_003851676.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778033|gb|ADL68592.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 319

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 15/226 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + ++++ K+ID  L   +   +  ++    D +       L GGK++R  LV   A L  
Sbjct: 6   AFVKDDMKKIDDFLLSNIKTNSPTIKKAVEDLV-------LSGGKRVRPLLVIAIARLGE 58

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    + + A+IE +H  +L+HDD+  +D+  +RRG+ +V  +Y + TA+  G+ L + 
Sbjct: 59  YNEDKIIPIAASIEIMHMATLVHDDI--IDDSKMRRGRESVQSKYGKETAVFTGDFLFSQ 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF +I+   ++    + ++ + ++            Q  +  +  I   +       KT 
Sbjct: 117 AFNVIADIISKENLKLIARGVKAICEGEI------EQFDNRYNLDISVLRYLKRIYRKTA 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L   +CESGA  A  S+     +R FG N+G+ FQ+ADD+LD E 
Sbjct: 171 LLFAISCESGATQAGLSKELTRAMRRFGLNVGMAFQIADDILDYEG 216


>gi|238761751|ref|ZP_04622725.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638]
 gi|238699865|gb|EEP92608.1| Octaprenyl-diphosphate synthase [Yersinia kristensenii ATCC 33638]
          Length = 323

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALGYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLES-----LRVLTLMSAATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S AI++ A+  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAILSDATPEQELTLQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|118586761|ref|ZP_01544198.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus
           oeni ATCC BAA-1163]
 gi|118432849|gb|EAV39578.1| geranyltranstransferase, farnesyl-diphosphate synthase [Oenococcus
           oeni ATCC BAA-1163]
          Length = 278

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 11/226 (4%)

Query: 21  DDLLLQTASHMQTQHNDR---LLSAIRYALLG-GKKIRSFLVTEC-ASLFNVNHLTALRV 75
           +  L +  + +     DR   +   I YAL   GK++R  L     A+  NV + + +  
Sbjct: 11  NRYLPEINNDLSNYFADRDDDIFRMITYALNSTGKRLRPLLTLATFAAAGNVINDSTIEA 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E +H YSL+HDDLP MD+   RR + +   ++    A++ G+GLLT AF+ IS+  
Sbjct: 71  ATAVEFVHAYSLVHDDLPEMDDDTKRRNQSSTWKKFGVGNAVLVGDGLLTEAFKKISNL- 129

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFAC 193
             L ++IR +L+ +L    G   M+ GQ  D   QD+      +  I  MKTGALM +A 
Sbjct: 130 -SLPESIRLRLIYNLALAAGPDNMVRGQQYDLFSQDKVESIDDLEFIHLMKTGALMTYAA 188

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
            +G I+A  S ++   L  +G NLGI FQ+ DDL D ++D    KK
Sbjct: 189 TAGGILAGLSDDKLRALNIYGANLGIAFQIKDDLRDIKQDEEENKK 234


>gi|325300424|ref|YP_004260341.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319977|gb|ADY37868.1| Polyprenyl synthetase [Bacteroides salanitronis DSM 18170]
          Length = 327

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 14/228 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q+N+K +  +    L   +     +    L   + Y L +GGK+IR  L+    +LF  +
Sbjct: 3   QQNAKALQELFQTYLENLSY---AREPMGLYKPVEYVLGIGGKRIRPTLMLLAYNLFKED 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L    A+E  H ++L+HDDL  MD    RRGKPTVH Q+DE  AI++G+ ++  ++
Sbjct: 60  VHAVLSQAMALETYHNFTLLHDDL--MDKADRRRGKPTVHKQWDENAAILSGDAMVMLSY 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKT 185
           + +     +    +  + ++ +     L  +  GQ  D++ E   +    +   + ++KT
Sbjct: 118 QFM----MKDCPAMYVRPVMEVFSQTAL-EICEGQQWDMEFERRQDVTAGEYMEMIRLKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L+  A + GAI+  AS+ + ++L   G  +G+ FQL DD LD   D
Sbjct: 173 SVLLAGALKIGAILGGASEADAQKLYDLGIRIGLAFQLQDDYLDVYGD 220


>gi|330962412|gb|EGH62672.1| CrtE [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 304

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 77/239 (32%), Positives = 127/239 (53%), Gaps = 9/239 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           ++ GL   L    +RI+  L+DLL    +       D +  A+R   L  GK++R  L+ 
Sbjct: 12  LDSGLTEHLASVRERIEKRLNDLLPAGGNE-----RDLVAIAMREGTLAPGKRVRPMLLM 66

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   AL +G A+E IH  SL+ DD+P MD+  +RRG PTVH+++ +  AI+A
Sbjct: 67  LAADGLGHDSSAALELGCAVEMIHAASLVLDDMPCMDDARLRRGLPTVHLKFGQDVAILA 126

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177
              LL+ AF +++   +++   +R+QL+  L + +G+QG++ GQ  D+ D     D  Q+
Sbjct: 127 AVALLSRAFGVVAGI-SEVPPAVRTQLVGVLANAVGMQGLVRGQFQDLHDGLHSRDAEQI 185

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               ++KTG L     +  ++++ A +  +  L+ F   LG  FQL DDL D   D  K
Sbjct: 186 ATTNRLKTGVLFSAIMDMASLVSGADEGTRAGLQDFATELGQAFQLYDDLQDKSADNAK 244


>gi|157964658|ref|YP_001499482.1| octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5]
 gi|157844434|gb|ABV84935.1| Octaprenyl-diphosphate synthase [Rickettsia massiliae MTU5]
          Length = 363

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 117/220 (53%), Gaps = 11/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I   L D + +  + + +  + ++ L+  + +Y L  GGK+IR  L    A +F+    
Sbjct: 42  KIQQDLKDAVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 101

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L + +F++
Sbjct: 102 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 159

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           + +  +     I++  +L+    I  +G +   +   +   I   +   I K KT  L  
Sbjct: 160 MVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 214

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ACE GAI+A    +  + ++ FG+ LG IFQ+ DDLLD 
Sbjct: 215 AACEVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 254


>gi|197287216|ref|YP_002153088.1| octaprenyl diphosphate synthase [Proteus mirabilis HI4320]
 gi|227357090|ref|ZP_03841460.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906]
 gi|194684703|emb|CAR46670.1| octaprenyl-diphosphate synthase [Proteus mirabilis HI4320]
 gi|227162782|gb|EEI47745.1| possible Farnesyltranstransferase [Proteus mirabilis ATCC 29906]
          Length = 323

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +        +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLTGRALDYQGDKHISVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSSATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+  A+  +++  + +G  LG  FQL DDLL
Sbjct: 155 DPDITEDDYMQVIYSKTARLFEAASHASAILCGATPEQEKAFQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|254481105|ref|ZP_05094351.1| polyprenyl synthetase superfamily protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038900|gb|EEB79561.1| polyprenyl synthetase superfamily protein [marine gamma
           proteobacterium HTCC2148]
          Length = 303

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 84/241 (34%), Positives = 133/241 (55%), Gaps = 7/241 (2%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALL-GGKKIRSFL 57
           M      +++    R +  L +L    ASH +   +H   L +A  Y+L  GGK++R  +
Sbjct: 1   MKADFDGEMESCRLRCNQRLAELPFDIASHSEAAAEHISELQNAYLYSLASGGKRVRPAI 60

Query: 58  VTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           +   A      H  +  +   A+E +H YSLIHDDLP+MD+  +RRGKP++H  Y+E TA
Sbjct: 61  LYFAAQCVGGGHCESLDQASCALELVHTYSLIHDDLPAMDDDDMRRGKPSLHKAYEESTA 120

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDE 174
           I+ G+GL   AFE++      L    + +++  L    GL+GM+GGQ +DIQ     I  
Sbjct: 121 ILVGDGLQARAFELLIDAPN-LTAEQKIRMVKVLAEAAGLKGMVGGQYIDIQVTGADITL 179

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            ++  +  MKTGAL+  +   G I A+A++ +   L  +G ++G+ FQ+ADD+LD E D 
Sbjct: 180 DELQAMHSMKTGALIRASLALGGIAANATEEQLAALDEYGTHIGLAFQVADDILDVEGDA 239

Query: 235 P 235
            
Sbjct: 240 E 240


>gi|34496302|ref|NP_900517.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
           12472]
 gi|34102155|gb|AAQ58522.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
           12472]
          Length = 309

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 9/196 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +     Y +  GGK++R  L                 + A IE IH  +L+HDD+  +D 
Sbjct: 19  IRQVAEYIISAGGKRLRPILTLLSGRALGYRGEHLFELAAMIEFIHTATLLHDDV--VDE 76

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+ T +  +    +++ G+ L T AF+++ + +     N+    +++   NI  +
Sbjct: 77  SDLRRGRKTANALFGNAASVLVGDFLYTRAFQMMVTTR-----NMTILEVMAEATNIIAE 131

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           G +  Q+L+I +  + E +   + + KT  L   A   GA++A AS  +   +  +G  L
Sbjct: 132 GEVL-QLLNIGNTDVSEDEYLKVIQYKTAKLFEAAARVGALIADASAEQVRAMADYGMYL 190

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ DD+LD   D
Sbjct: 191 GTAFQIIDDVLDYSGD 206


>gi|315634196|ref|ZP_07889485.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
 gi|315477446|gb|EFU68189.1| geranyltranstransferase [Aggregatibacter segnis ATCC 33393]
          Length = 296

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 7/233 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           +  E+ + +   ++  L +  +H+ +     L  A++Y  LLGGK+IR FLV     +  
Sbjct: 3   QFSEDLQHVQQRINHFLAEQFAHLDSA-PAPLADAMKYGLLLGGKRIRPFLVYATGRMLG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +        AAIE IH YSLIHDDLP+MD+  +RRG  T HI +DE TAI+AG+ L  +
Sbjct: 62  ADLAQLDYAAAAIEAIHAYSLIHDDLPAMDDDELRRGHKTCHIAFDEATAILAGDALQAF 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           AFEI++   T L    +  L+ +L+   G++GM  GQ LD+  E   I   ++  I   K
Sbjct: 122 AFEILTDIPT-LSAEQKLALIKTLSAASGVKGMCLGQSLDLISEHKVISLQELEHIHLNK 180

Query: 185 TGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           TGAL+  A   G I +   A +   ++L  +   +G+ FQ+ DD+LD E D  
Sbjct: 181 TGALLTAALMMGFICSPHFAEKALAQQLERYATAIGLAFQVQDDILDIEGDSE 233


>gi|156120113|gb|ABG57080.2| Hep2 [Heliophilum fasciatum]
          Length = 320

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 15/236 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L  ++Q +  R++  L +        M T H     ++      GGK++R   V  
Sbjct: 1   MSFQLFREIQADLARVEKELSNY-------MDTDHPTLTAASGHLLYAGGKRLRPAFVLL 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                N +    L +   +E IH  +L+HDD+  +D    RRG PTV  ++    ++ AG
Sbjct: 54  AGRFHNYSFERLLPLAVTMEMIHMATLVHDDV--IDESETRRGTPTVRARWGNRVSMHAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   +  +I+     +   + ++  + +            QM    D   +       
Sbjct: 112 DHLFARSLLLIAEMNNPIIARVLAETSVEMCEGEI------QQMATAFDVEQNFRDYLYR 165

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            K KT  L+  +C+ GA+   A       L+ +G +LG+ FQ+ DD+LD E D  K
Sbjct: 166 IKRKTALLLSASCQLGAVAVDAPPYMIRALKWYGYHLGMAFQVTDDILDLEADEAK 221


>gi|39996419|ref|NP_952370.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA]
 gi|39983299|gb|AAR34693.1| octaprenyl-diphosphate synthase [Geobacter sulfurreducens PCA]
 gi|298505429|gb|ADI84152.1| octaprenyl diphosphate synthase [Geobacter sulfurreducens KN400]
          Length = 322

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 12/198 (6%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y L  GGK+IR  L+   A L        + + + IE IH  +L+HDD+  +DN  +RR
Sbjct: 35  EYVLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATLLHDDV--VDNATLRR 92

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  + +  +    +++ G+ L + +F ++         ++R   ++S    I  +G +  
Sbjct: 93  GNASANEVWGNEASVLVGDFLFSKSFSLMVEAG-----DLRILKVISGATTIIAEGEVL- 146

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+L   D  + + +   + K KT  L+  ACE+GAI+  +S  ++E LR FG +LGI FQ
Sbjct: 147 QLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAEQQEALRDFGMDLGIAFQ 206

Query: 223 LADDLLDC---EEDLPKK 237
           L DD LD    EE   K+
Sbjct: 207 LMDDTLDYTASEEQFGKE 224


>gi|208434832|ref|YP_002266498.1| geranyltrans transferase [Helicobacter pylori G27]
 gi|208432761|gb|ACI27632.1| geranyltrans transferase [Helicobacter pylori G27]
          Length = 303

 Score =  191 bits (485), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHHLHLESFHPYLQKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGLVASGIKNEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238


>gi|323464391|gb|ADX76544.1| geranyltranstransferase [Staphylococcus pseudintermedius ED99]
          Length = 296

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 133/240 (55%), Gaps = 15/240 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN  L   L++ +  ++  ++D          +Q    L  ++RY+L  GGK+IR  L+ 
Sbjct: 4   MNQNLNELLEQFNGHLNHAIED----------SQLGTSLEQSMRYSLEAGGKRIRPLLML 53

Query: 60  ECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               + +     + + V  A+E IH YSLIHDDLP+MD+  +RRGKPT H  Y E  AI+
Sbjct: 54  ATIKMLDHQKLESGMHVALALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHTVYGEWLAIL 113

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           AG+ LLT AFE I+     +   I+  L+  ++   G QGM+GGQ LD+Q E   I   +
Sbjct: 114 AGDALLTKAFEKIA-LTPHIDAQIKVALIEKISQASGHQGMVGGQTLDMQSENQQISLEK 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  I   KTGAL+ FA E+  I+    Q   ++L  F ++LG+IFQ+ DDLLD   +  K
Sbjct: 173 LESIHIHKTGALIQFAIEAATIITSIRQTTAQQLIQFSQHLGVIFQIKDDLLDVYGNEAK 232


>gi|292486819|ref|YP_003529689.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430]
 gi|292900783|ref|YP_003540152.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946]
 gi|291200631|emb|CBJ47763.1| octaprenyl-diphosphate synthase [Erwinia amylovora ATCC 49946]
 gi|291552236|emb|CBA19273.1| octaprenyl diphosphate synthase [Erwinia amylovora CFBP1430]
 gi|312170887|emb|CBX79146.1| octaprenyl diphosphate synthase [Erwinia amylovora ATCC BAA-2158]
          Length = 324

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 114/227 (50%), Gaps = 13/227 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFN- 66
           N ++I+ +    +    + +  Q N    L++ + Y ++  GGK+IR  +    A   N 
Sbjct: 2   NLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAIND 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + V A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T 
Sbjct: 62  YAGKQHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF++++S  +     ++   ++S   N+  +G +  Q+++  D  I E     +   KT 
Sbjct: 120 AFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A +S AI+A AS  E++ L+ +G  +G  FQL DDLLD   D
Sbjct: 174 RLFEAAAQSSAILAGASATEEQALQDYGRYIGTAFQLIDDLLDYSAD 220


>gi|194333227|ref|YP_002015087.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311045|gb|ACF45440.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 337

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 19/239 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
              + +K +E  KRI+  L       A        + L +  RY L G GK+IR FL   
Sbjct: 12  QDQVETKYKEYHKRINDAL-------AGCFTKSTPETLYAPARYILEGKGKRIRPFLTLL 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A     +   AL     +E +H ++L+HDD+  MD   +R G+PTVH+++DE  AI++G
Sbjct: 65  AAESVCNSSDDALNAALGVEILHNFTLMHDDI--MDQADLRHGRPTVHLKWDENAAILSG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QV 177
           + ++ +A+E   + KT           L    N     +  GQ LD++ E   E      
Sbjct: 123 DMMIAFAYECALNTKTDRHAE------LVHILNDANITICEGQALDMELEQRAEATIADY 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +   KTG L+  A E+G ++ +A   + + L  FGE +G  FQ+ DD LD   D  K
Sbjct: 177 LDMISKKTGRLISAALEAGGVVGNADALQLQALVTFGEKIGRAFQVQDDYLDIMADDGK 235


>gi|310766238|gb|ADP11188.1| Octaprenyl diphosphate synthase [Erwinia sp. Ejp617]
          Length = 324

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 13/227 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFN- 66
           N ++I+ +    +    + +  Q N    L++ + Y ++  GGK+IR  +    A   N 
Sbjct: 2   NLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAIND 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + V A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T 
Sbjct: 62  YAGKQHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF++++S  +     ++   ++S   N+  +G +  Q+++  D  I E     +   KT 
Sbjct: 120 AFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A +S AI+A AS+ E++ L+ +G  +G  FQL DDLLD   D
Sbjct: 174 RLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSAD 220


>gi|259907026|ref|YP_002647382.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96]
 gi|224962648|emb|CAX54103.1| Octaprenyl diphosphate synthase [Erwinia pyrifoliae Ep1/96]
 gi|283476821|emb|CAY72659.1| octaprenyl diphosphate synthase [Erwinia pyrifoliae DSM 12163]
          Length = 324

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 13/227 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFN- 66
           N ++I+ +    +    + +  Q N    L++ + Y ++  GGK+IR  +    A   N 
Sbjct: 2   NLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAIND 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + V A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T 
Sbjct: 62  YAGKQHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF++++S  +     ++   ++S   N+  +G +  Q+++  D  I E     +   KT 
Sbjct: 120 AFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A +S AI+A AS+ E++ L+ +G  +G  FQL DDLLD   D
Sbjct: 174 RLFEAAAQSSAILAGASEAEEQALQDYGRYIGTAFQLIDDLLDYSAD 220


>gi|207721484|ref|YP_002251924.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
           protein [Ralstonia solanacearum MolK2]
 gi|206586644|emb|CAQ17230.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
           protein [Ralstonia solanacearum MolK2]
          Length = 352

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+   +D ++   L    + +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 36  LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 88

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 89  LGYRGNHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLY 146

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++        D++R   +L+   N+  +G +  Q+L++ D  + E +   + + K
Sbjct: 147 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 200

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +     +G  +G  FQ+ DDLLD   
Sbjct: 201 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 248


>gi|325917351|ref|ZP_08179568.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536438|gb|EGD08217.1| farnesyl-diphosphate synthase [Xanthomonas vesicatoria ATCC 35937]
          Length = 287

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 1/209 (0%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+ A    T    RL +A+R+A+LGG K++R  LV    +LF            ++E IH
Sbjct: 13  LEAALPGATLAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFRAAEDLLDTPAVSVELIH 72

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE+++S     +  + 
Sbjct: 73  AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLASAPVSAELRVG 132

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               L+     G         +D   +      +  +  +KTGAL+  A   GA+   A+
Sbjct: 133 WLQHLASAAGAGGMCGGQALDIDATGQVQSLHALQRMHALKTGALIRAAVRMGALSGRAA 192

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +++R+  F + LG+ FQ+ DD+LD E 
Sbjct: 193 PADQQRVDDFADALGLAFQVRDDILDVES 221


>gi|195953616|ref|YP_002121906.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933228|gb|ACG57928.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 258

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 116/222 (52%), Gaps = 15/222 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
             +   +I+  L +LL              L  A+ Y +   GK+IR  L        ++
Sbjct: 3   FDDLRPKIEKRLRELLTPFE-------PKVLYDAMAYYVFQEGKRIRPVLCVIGGYACDL 55

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+ +G A+E IH YSLIHDD+P +DN   RRGKPT H  + +  A++AG+GLL+ A
Sbjct: 56  DEEDAITLGCAVEFIHNYSLIHDDMPELDNDDERRGKPTCHKIFGQDIALLAGDGLLSLA 115

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+I+S+          ++++  ++ N G++GM+ GQ+ DI+     E     +  +KT A
Sbjct: 116 FDILSNESLYKNPKNLAKVVNYVSKNAGIEGMVAGQVYDIKG----EKDFLKVASLKTAA 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L+  +    +I+     +  E+L   G N+G++FQL DD  D
Sbjct: 172 LIKTSLVIPSILKGVDFSLYEKL---GHNIGVLFQLTDDYYD 210


>gi|148643503|ref|YP_001274016.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
           [Methanobrevibacter smithii ATCC 35061]
 gi|148552520|gb|ABQ87648.1| bifunctional short chain isoprenyl diphosphate synthase, IdsA
           [Methanobrevibacter smithii ATCC 35061]
          Length = 330

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 7/204 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            + L  A  Y    GGK +R  L    +     +   +L+  AAIE IH +SLIH     
Sbjct: 27  PNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDI 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKP VH  +DE  AI+AG+ L + AFEII +   +     +    L+ T   
Sbjct: 85  MDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPTQLSQTLA-TVAD 143

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               +  GQ  D+  E    + E +   +   KTGAL+  A ++GAIM  A+Q   + + 
Sbjct: 144 ACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMY 203

Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
            +G  +G+ FQ+ DD LD   D  
Sbjct: 204 DYGRLIGLAFQIQDDYLDLASDEE 227


>gi|297518736|ref|ZP_06937122.1| octaprenyl diphosphate synthase [Escherichia coli OP50]
          Length = 286

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 6   GGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 63

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 64  AAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVN 117

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +   I+A  +  E++ L+ +G  LG  FQL DDLL
Sbjct: 118 DPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLL 177

Query: 229 DCEED 233
           D   D
Sbjct: 178 DYNAD 182


>gi|254460310|ref|ZP_05073726.1| geranyltranstransferase [Rhodobacterales bacterium HTCC2083]
 gi|206676899|gb|EDZ41386.1| geranyltranstransferase [Rhodobacteraceae bacterium HTCC2083]
          Length = 284

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 130/209 (62%), Gaps = 7/209 (3%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           + +  +  ++ A+RYA  GGK++R+FLV E A +  V+   ++    AIE +H YSL+HD
Sbjct: 16  LSSFADVPIVQAMRYATTGGKRLRAFLVRESARVCGVDVARSIAPACAIEALHAYSLVHD 75

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP MD+  +RRG+PTVH+++D+ TA++ G+ L T AFE++S P       +RS L L+L
Sbjct: 76  DLPCMDDDDLRRGQPTVHVKWDDATAVLCGDALQTLAFELVSEPSCHEDPLVRSTLALTL 135

Query: 151 THNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
               G  GM+ GQ LDI+ E     +   Q+  +Q  KTGAL+ ++  +GA++A A  N 
Sbjct: 136 ARASGAAGMVYGQALDIEAESAANPLTIEQITELQNGKTGALITWSATAGAVLAKADTN- 194

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLP 235
              L+ +G+ LG+ FQ+ADD+LD   D  
Sbjct: 195 --ALKTYGDALGLAFQIADDILDVTSDAE 221


>gi|165918704|ref|ZP_02218790.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
 gi|165917639|gb|EDR36243.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
          Length = 332

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 20/234 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
             L   +Q + + +D ++   + + +SH+       L+  I + ++  GGK++R  +V  
Sbjct: 13  ESLRQPVQNDIEAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63

Query: 61  CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A             +   IE IH  +L+HDD+  +D    RRG+ T +  +    +++ 
Sbjct: 64  TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + AF+I++      + N+    +L+ T N   +G +  Q+++  D  IDE   + 
Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ DDLLD  +D
Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKD 229


>gi|254779530|ref|YP_003057636.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Helicobacter pylori B38]
 gi|254001442|emb|CAX29437.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Helicobacter pylori B38]
          Length = 303

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----V 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSN--SLLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISTSLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEK 238


>gi|229546828|ref|ZP_04435553.1| geranyltranstransferase [Enterococcus faecalis TX1322]
 gi|256852634|ref|ZP_05558005.1| geranyltranstransferase [Enterococcus faecalis T8]
 gi|257077869|ref|ZP_05572230.1| polyprenyl synthetase [Enterococcus faecalis JH1]
 gi|294780571|ref|ZP_06745934.1| geranyltranstransferase [Enterococcus faecalis PC1.1]
 gi|307268062|ref|ZP_07549450.1| geranyltranstransferase [Enterococcus faecalis TX4248]
 gi|307289416|ref|ZP_07569370.1| geranyltranstransferase [Enterococcus faecalis TX0109]
 gi|307290056|ref|ZP_07569980.1| geranyltranstransferase [Enterococcus faecalis TX0411]
 gi|229307993|gb|EEN73980.1| geranyltranstransferase [Enterococcus faecalis TX1322]
 gi|256711979|gb|EEU27016.1| geranyltranstransferase [Enterococcus faecalis T8]
 gi|256985899|gb|EEU73201.1| polyprenyl synthetase [Enterococcus faecalis JH1]
 gi|294452398|gb|EFG20837.1| geranyltranstransferase [Enterococcus faecalis PC1.1]
 gi|306498898|gb|EFM68392.1| geranyltranstransferase [Enterococcus faecalis TX0411]
 gi|306499671|gb|EFM69034.1| geranyltranstransferase [Enterococcus faecalis TX0109]
 gi|306515703|gb|EFM84230.1| geranyltranstransferase [Enterococcus faecalis TX4248]
 gi|315029671|gb|EFT41603.1| geranyltranstransferase [Enterococcus faecalis TX4000]
 gi|315031732|gb|EFT43664.1| geranyltranstransferase [Enterococcus faecalis TX0017]
 gi|315147933|gb|EFT91949.1| geranyltranstransferase [Enterococcus faecalis TX4244]
 gi|315165153|gb|EFU09170.1| geranyltranstransferase [Enterococcus faecalis TX1302]
 gi|323480221|gb|ADX79660.1| Farnesyl-diphosphate synthase [Enterococcus faecalis 62]
 gi|327534568|gb|AEA93402.1| geranyltranstransferase [Enterococcus faecalis OG1RF]
          Length = 293

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G I+A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|227890284|ref|ZP_04008089.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200]
 gi|227849098|gb|EEJ59184.1| Farnesyltranstransferase [Lactobacillus johnsonii ATCC 33200]
          Length = 288

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 17/233 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLF 65
           KL++  ++    +D+ L +   H+ T+ ++   S  + Y+++ GGK++R  L        
Sbjct: 2   KLKDFQEKYTPQIDNFLKE---HLVTEIDNLTFSKIMSYSVMAGGKRLRPLLFLATLETL 58

Query: 66  NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           N       LR+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+GLL
Sbjct: 59  NHKIEEPELRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDGLL 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFM 179
               + I+         I        +  +G  GM+GGQ LDI     D  +     +  
Sbjct: 119 PLGIQWITEGSNSAALAIVI------SQAVGPNGMVGGQYLDIDTTNNDSAKENAKMIDQ 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ +KTG L+  + +  AI A A+ +E  RL  F +  G  +Q+ DDL+D  E
Sbjct: 173 MEWLKTGCLIEASVKMAAIYAGATDSEFNRLDNFSKRFGRSYQIYDDLVDVVE 225


>gi|325128970|gb|EGC51821.1| geranyltranstransferase [Neisseria meningitidis N1568]
          Length = 249

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 3/217 (1%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL+     + +    L  A+RYA L GGK++R  LV   + L    H    +  AAIE
Sbjct: 19  ELLLERFLPSENEIPHTLHEAMRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIE 78

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSL+HDD+P+MDN  +RRGKPT HI+Y E  A++ G+ L T AF+++S P      
Sbjct: 79  MIHAYSLVHDDMPAMDNDSLRRGKPTCHIKYGEANALLTGDALQTQAFDVLSRPTELPAA 138

Query: 141 NIRSQ-LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
              +   +L+               L    + + +  +  +  +KTGAL+  A   GA+ 
Sbjct: 139 RQLAMLSVLAKAGGSAGMAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMS 198

Query: 200 A-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + S++    L  +   LG+ FQ+ DD+LDC+ D  
Sbjct: 199 CPNLSEDSLAVLDAYAAKLGLAFQVIDDVLDCDADTA 235


>gi|308062245|gb|ADO04133.1| geranyltranstransferase [Helicobacter pylori Cuz20]
          Length = 303

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 127/244 (52%), Gaps = 15/244 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN    S      +R ++ L+   L    H+++ H     +     L GGK+ R  L   
Sbjct: 1   MNNPNLSFYHNECERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLA 56

Query: 61  C-ASLFN-----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              +L              ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE 
Sbjct: 57  VLCALVGQKDYSNRQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDET 116

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172
           TA++ G+ L TY+FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   +
Sbjct: 117 TAVLIGDALNTYSFELLSN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPL 174

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCE 231
           +  Q+  + + KT  L+  +   G + +     E  + L+ FG  +G+ FQ+ DD++D  
Sbjct: 175 NLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQDFGLKMGLCFQVLDDIIDVT 234

Query: 232 EDLP 235
           +D  
Sbjct: 235 QDEE 238


>gi|110635757|ref|YP_675965.1| farnesyl-diphosphate synthase [Mesorhizobium sp. BNC1]
 gi|110286741|gb|ABG64800.1| farnesyl-diphosphate synthase [Chelativorans sp. BNC1]
          Length = 305

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 112/231 (48%), Positives = 155/231 (67%), Gaps = 3/231 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
             S L  N++ ++ +L  LL +     +      LL+A+R+  L GGK++R FLV E A+
Sbjct: 9   FESLLALNAQSVEDLLRHLLDERVREGEILRPSHLLAAMRHGVLNGGKRLRPFLVLESAA 68

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF    + +LRV AA+EC+HCYSLIHDDLP+MD+  +RRG+PTVH  +DE TAI+AG+ L
Sbjct: 69  LFEAQGMASLRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHRAFDEATAILAGDSL 128

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
           LTYAF+II+  +T L+  IR+ L++ L    G+ GM GGQ LD+  E +  DE  +  +Q
Sbjct: 129 LTYAFDIIADAETDLRPEIRADLVVKLATAAGMGGMAGGQALDLLAEKVPPDEVGIVQLQ 188

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            MKTGAL  FACE+GAI+A AS  ++ER+  FG  +G+ FQLADDLLD   
Sbjct: 189 AMKTGALFRFACEAGAIVADASSADRERMSSFGAAIGLAFQLADDLLDLTA 239


>gi|270339768|ref|ZP_06005968.2| polyprenyl synthetase [Prevotella bergensis DSM 17361]
 gi|270333767|gb|EFA44553.1| polyprenyl synthetase [Prevotella bergensis DSM 17361]
          Length = 325

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 19/230 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            E  ++I++ ++ L          +    L   ++Y L +GGK+IR  L+    +L+  +
Sbjct: 6   DEILQKINSFIEQL-------PYDRTPAALYEPVKYVLSMGGKRIRPTLMLLGYNLYKDD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             + L     +E  H Y+L+HDDL  MDN  +RRG  TVH +++   A+++G+ +L  A+
Sbjct: 59  PESILMQAVGLETYHNYTLLHDDL--MDNADLRRGHETVHKKWNANQAVLSGDSMLVLAY 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKT 185
           + +        + +                +  GQ  DI  E    + E +   + ++KT
Sbjct: 117 QRMMDCPVDKLEKVLGLF------TETALEIGEGQQYDIDFEMRNDVSEDEYIEMIRLKT 170

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  A + GAI+A AS ++ ++L  FGE +G+ FQL DD LD   D  
Sbjct: 171 SVLLACALKIGAILAGASPSDADKLYKFGEKMGLAFQLQDDYLDVYGDEK 220


>gi|32471772|ref|NP_864766.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula
           baltica SH 1]
 gi|32397143|emb|CAD72450.1| geranylgeranyl pyrophosphate synthetase [precursor] [Rhodopirellula
           baltica SH 1]
          Length = 317

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/242 (33%), Positives = 117/242 (48%), Gaps = 18/242 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           N  L   +      ++  L     Q A   +    +RL +AIRYA L  GK++R  L   
Sbjct: 17  NESLKDYMDARRPAVEAAL-----QAACEDRPGVPERLAAAIRYAVLAPGKRLRPMLTIM 71

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A     +  +A+    A+E IH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+AG
Sbjct: 72  AAEACGGDAESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAG 131

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176
           + L + AF  +    +    +  + L+ +L    G  G++GGQ  D+  E          
Sbjct: 132 DALQSMAFAHLHHSTSDATKS--AALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGA 189

Query: 177 ------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                 +  I   KTGAL       GAI A A  N    L  + +  G+ FQ+ DDLLDC
Sbjct: 190 DAALKHLEAIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDC 249

Query: 231 EE 232
             
Sbjct: 250 TS 251


>gi|256957073|ref|ZP_05561244.1| polyprenyl synthetase [Enterococcus faecalis DS5]
 gi|256947569|gb|EEU64201.1| polyprenyl synthetase [Enterococcus faecalis DS5]
 gi|315034211|gb|EFT46143.1| geranyltranstransferase [Enterococcus faecalis TX0027]
          Length = 293

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKTAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G I+A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGILANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|15645545|ref|NP_207721.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695]
 gi|2314066|gb|AAD07974.1| geranyltranstransferase (ispA) [Helicobacter pylori 26695]
          Length = 303

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|320540162|ref|ZP_08039817.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str.
           Tucson]
 gi|320029828|gb|EFW11852.1| putative octaprenyl diphosphate synthase [Serratia symbiotica str.
           Tucson]
          Length = 333

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/214 (30%), Positives = 115/214 (53%), Gaps = 11/214 (5%)

Query: 22  DLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           D++   A+ ++  H+D  L++ + Y ++  GGK+IR  +    A   N      + V A 
Sbjct: 23  DMMAVNAAILEQLHSDVTLINQLCYYIISGGGKRIRPMIAVLAARALNYEGNKHVTVAAL 82

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T AF++++S K+  
Sbjct: 83  IEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLKS-- 138

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              +R   ++S   N+  +G +  Q++++ D  I E     +   KT  L   A +S AI
Sbjct: 139 ---LRVLALMSEAVNVIAEGEVL-QLMNVHDPDITEESYMQVIYSKTARLFEAAAQSSAI 194

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ A+Q E++ L+ +G  LG  FQL DDLLD   
Sbjct: 195 LSGANQAEEKALQDYGRYLGTAFQLIDDLLDYSA 228


>gi|114566224|ref|YP_753378.1| trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337159|gb|ABI68007.1| Trans-hexaprenyltranstransferase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 322

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 23/225 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           QE SK++D+ + +LL ++A H+                 GGK++R       A  +  + 
Sbjct: 19  QELSKKLDSRI-ELLNESAVHLIK--------------AGGKRLRPAFALLSAHFYMDDL 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              + +   +E IH  SL+HDD+  +DN   RRG  TV   +    +I AG+ +   A  
Sbjct: 64  TEVIPLAVGLELIHMASLVHDDV--IDNSQTRRGTETVKSAWGNRVSIYAGDFIFARALS 121

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           +I++ +     ++ ++  + +     +      QM+   +  +         + KT  L+
Sbjct: 122 LIATYERSNVVDVLAEASMKICEGEII------QMMSCYNVKLGLKNYLRRIERKTALLI 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
             +C+ GA++A+A + E   LR +G  LG+ FQ+ DD+LD   D 
Sbjct: 176 SVSCQLGAMIANAPEQEVRALRNYGYYLGMAFQVTDDILDIIADE 220


>gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1]
          Length = 326

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 24/254 (9%)

Query: 7   SKLQENSKRIDTILD---DLLLQTASHMQTQH--NDRLLSAIRYALL-GGKKIRSFLVTE 60
           +   +N+K +D +     + L +    + TQ    + L +A RYA+  GGK +R  L   
Sbjct: 15  TAFIQNAKHLDQVRQWQTEHLPKLLDLILTQASLPEPLNAACRYAMSNGGKHVRPLLALS 74

Query: 61  CASLF--NVNHLTAL-----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +     +H               R   A+E IH YSLIHDDLP MD+  +RRG+PT 
Sbjct: 75  TFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVELIHSYSLIHDDLPCMDDDALRRGQPTC 134

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           HI Y E  A++AG+ L + AFE++     +   +      L+   +   + M+ GQMLDI
Sbjct: 135 HIVYGEDIALLAGDALQSIAFEVLFECYDKNSADDAIAYKLAKLLSCRARRMVSGQMLDI 194

Query: 168 QDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + E   + + ++  I + KTGAL+  A   GAI A    +    L+ +   +G+ FQ+ D
Sbjct: 195 KGENQMLSQDKLEAIHRDKTGALIEAAVMMGAICADVQTDTLGYLKHYARAIGLAFQVQD 254

Query: 226 DLLDCEED---LPK 236
           D+LD   D   L K
Sbjct: 255 DVLDITADTITLGK 268


>gi|150026434|ref|YP_001297260.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772975|emb|CAL44459.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
          Length = 324

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 15/222 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
               ++ D   +      T+    L + I Y L LGGK++R  L      +F+V+   +L
Sbjct: 6   HYQELISDYFSELHL---TKEPKNLYNPIDYILSLGGKRMRPILTLMATEVFDVDCKKSL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               AIE  H +SL+HDD+  MD+  +RRG  TVH +++  T I++G+ +L  A++    
Sbjct: 63  AAATAIEIFHNFSLVHDDI--MDDAPLRRGNETVHEKWNINTGILSGDAMLILAYQHFEE 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
            + ++  +      L+   +     +  GQ  D+  E  D+    +   + + KT  L+ 
Sbjct: 121 YEPKIFRD------LAKLFSKTALEVCEGQQYDVDFETRDDVIIAEYLKMIEYKTAVLVG 174

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A + GAI+A  S      +  FG NLGI FQL DD LD   
Sbjct: 175 AAMKMGAIVAQTSTENANLIYDFGLNLGIAFQLQDDYLDAFG 216


>gi|317121083|ref|YP_004101086.1| polyprenyl synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591063|gb|ADU50359.1| Polyprenyl synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 331

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 17/231 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
           G +   ++++   ++  +   L     H        ++    Y   GG K++R  L+   
Sbjct: 14  GAVFEPIRDDLAGVEVAIRRALDGPDPH--------IVELATYLQRGGGKRLRPALLLLT 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A  F+ +    L V AA+E IH  +L+HDD+  +D    RRG PTV++++   TA++ G+
Sbjct: 66  ARNFHYDRERLLPVAAAVELIHMATLVHDDI--VDGATSRRGLPTVNVRWGTGTAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   AF ++++         R   +++        G +  Q   + D    E   +   
Sbjct: 124 FLFARAFSLLAADGDN-----RVVRVMAEAVYEMSTGEIEQQ-AQLFDPAAGEEGYYRRI 177

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT   +   C  G +M  A + + E LR +G  +G+ FQ+ DD+LD   
Sbjct: 178 YKKTAHFISHCCLMGGLMGGAPERQVEALRRYGYGIGMGFQVIDDILDLTG 228


>gi|309783042|ref|ZP_07677761.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA]
 gi|308918150|gb|EFP63828.1| octaprenyl-diphosphate synthase [Ralstonia sp. 5_7_47FAA]
          Length = 325

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+ + +D ++   L      +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 9   LLAPVAEDMRAVDAVIRRRLGSEVV-LINQIGEYIISA------GGKRLRPVILLLVANA 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 62  LGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTANAVFGNAASVLVGDFLY 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++    +     +R   +L+   NI  +G +  Q+L++ D  + E +   + + K
Sbjct: 120 SRAFQMMVQANS-----MRIMQILADATNIISEGEVL-QLLNMHDPDVTEERYLQVIRYK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +E    +G  +G  FQ+ DDLLD   
Sbjct: 174 TAKLFEAAAQIGAVLSGADAATEEAAAEYGRRIGTAFQIVDDLLDYTS 221


>gi|307822417|ref|ZP_07652649.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
 gi|307736983|gb|EFO07828.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
          Length = 298

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/241 (32%), Positives = 125/241 (51%), Gaps = 12/241 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L   L     R++  LD  L       ++    +L  A+RY+ L GGK++R  L  
Sbjct: 1   MSNALKDYLDFCQNRVERALDARLPS-----ESILPQKLHRAMRYSTLDGGKRMRPMLTY 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                  +          A+E IH YSLIHDDLP+MD+  +RRGK T H+ +DE TAI+ 
Sbjct: 56  CTGKTLGIAPEALDGPACAVEFIHVYSLIHDDLPAMDDDDLRRGKATCHVAFDEATAILT 115

Query: 120 GNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L   AFEI++  P        R +++++LT   G QGM+GGQ +D++     +   +
Sbjct: 116 GDALQALAFEILANDPSITATAEGRLKMIIALTKASGSQGMVGGQAIDLESVGTKLTLPE 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +  +   KTGAL+  +    A +A A    +  ++L  + + +G+ FQ+ DD+LD E D 
Sbjct: 176 LENMHIHKTGALIRASVNM-ATLAKADIDPDVAKKLDNYAKCIGLSFQVKDDILDEESDT 234

Query: 235 P 235
            
Sbjct: 235 A 235


>gi|323495811|ref|ZP_08100879.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326]
 gi|323319027|gb|EGA71970.1| octaprenyl-diphosphate synthase [Vibrio sinaloensis DSM 21326]
          Length = 323

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPEDVERALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|210135119|ref|YP_002301558.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12]
 gi|210133087|gb|ACJ08078.1| trans-isoprenyl diphosphate synthase [Helicobacter pylori P12]
          Length = 303

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 75/231 (32%), Positives = 122/231 (52%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV----- 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      SL        
Sbjct: 14  ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT
Sbjct: 130 FELLSNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +     E  + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238


>gi|238797569|ref|ZP_04641066.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969]
 gi|238718566|gb|EEQ10385.1| Octaprenyl-diphosphate synthase [Yersinia mollaretii ATCC 43969]
          Length = 323

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALHYQGTKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLES-----LRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A+AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLANASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|330719242|ref|ZP_08313842.1| geranyltranstransferase [Leuconostoc fallax KCTC 3537]
          Length = 292

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 75/237 (31%), Positives = 127/237 (53%), Gaps = 18/237 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L   + +   ++D  L+  L Q         ++ L + ++YA+L GGK++R  L     
Sbjct: 3   ELEKFINKWRPKVDQQLEQDLNQA------TLDEDLNAMMKYAVLNGGKRLRPLLTLAVV 56

Query: 63  SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             F        L+  +A+E IH YSL+HDDLP+MDN  +RRGKP+VH  + E   I+ G+
Sbjct: 57  QSFGRTITADILKAASAVEWIHSYSLVHDDLPAMDNDTMRRGKPSVHALFGEANGILVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----- 176
            LLT AF I+S  ++      R  L+ +L+   G  GM+ GQ+ D+++    +       
Sbjct: 117 ALLTGAFAILSDSRSNEDVQTRLDLIQALSALAGGYGMVYGQVNDMRNHNNTDDNNADIG 176

Query: 177 ----VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               +  + + KT AL+ +A E+GA++A   ++ +  LR FG++ G+ +Q+ DD+ D
Sbjct: 177 VDWLLSAVHRPKTAALLTYASEAGAMLAQQ-RSVQTHLRQFGDSFGVAYQIQDDIDD 232


>gi|215488503|ref|YP_002330934.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215266575|emb|CAS11014.1| octaprenyl diphosphate synthase [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 323

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAIGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|325955638|ref|YP_004239298.1| polyprenyl synthetase [Weeksella virosa DSM 16922]
 gi|323438256|gb|ADX68720.1| Polyprenyl synthetase [Weeksella virosa DSM 16922]
          Length = 323

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 24/237 (10%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           ++E  + ID  ++        ++  +    L   I Y L +GGK+IR  +V     +FN 
Sbjct: 4   IEELHQIIDQAIE-------KNLDIKSPRELYEPIEYILGIGGKRIRPLIVLMGNQMFNG 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A++   A+E  H ++L+HDD+  MD+  +RRGK  VHI+Y   +AI++G+ +L  A
Sbjct: 57  LIEDAVKPAIAMEYFHNFTLMHDDI--MDSAPLRRGKEAVHIKYGINSAILSGDTMLIRA 114

Query: 128 FEIISSPKTQL-KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
           +E++      + K+ IR         N     +  GQ  D+  E    I     + + K 
Sbjct: 115 YELLEDLPNDVFKEAIRL-------FNKTAIELCEGQQYDVNYETQKEISFEDYYKMIKG 167

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           KT  L+    + GA++A A + E +RL   G NLGI +QL DD LD       + KK
Sbjct: 168 KTAVLVGACLKLGALIAGAPKEEADRLYEIGLNLGIAYQLKDDYLDVFGTSVKIGKK 224


>gi|317152625|ref|YP_004120673.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942876|gb|ADU61927.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 297

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 12/225 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +  +L E +  ++  L+  L            D LL A+ Y+LL GGK++R  L    A+
Sbjct: 3   IKGRLAERALGVEKYLEGCLRNRGI------PDSLLQAMEYSLLAGGKRLRPVLTLAWAT 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +    +   A++ECIH YSLIHDDLP+MD+  +RRG+P+ H +YDE TAI+AG+GL
Sbjct: 57  MLGGDAERVMPFAASLECIHTYSLIHDDLPAMDDDDLRRGRPSNHKRYDEATAILAGDGL 116

Query: 124 LTYAFEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
           LT +F +++       L      + +  L    G  GM+GGQ +D++     E    ++ 
Sbjct: 117 LTESFVLMTEASLIRGLPAERVLRAVSVLAVAAGSGGMVGGQAVDMEFTGRAEVALDELR 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +  MKTGAL+  ACE GA++A AS+ + E  R +G  +G+ FQ+
Sbjct: 177 AMHAMKTGALITAACECGAVLAGASERDVENAREYGRAVGVAFQI 221


>gi|311068789|ref|YP_003973712.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus
           1942]
 gi|310869306|gb|ADP32781.1| heptaprenyl diphosphate synthase component II [Bacillus atrophaeus
           1942]
          Length = 320

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 13/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ++  +D +  +    +++ +   L  A  + L  GGK+IR   V       N +      
Sbjct: 10  LNDDIDIIEKELEQTVRSDYP-LLSEAGLHLLQAGGKRIRPVFVLLSGMFGNYDINKIKY 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V   +E IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++  
Sbjct: 69  VAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRI 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  I SQ ++ +            Q+ D  +   +        K KT  L+  +C+
Sbjct: 127 NEPKAHRILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTAILIAVSCQ 180

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            GAI + A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 181 LGAIASGADEKVHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225


>gi|325846498|ref|ZP_08169413.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481256|gb|EGC84297.1| putative geranyltranstransferase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 279

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 7/223 (3%)

Query: 12  NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN- 68
           N K  D IL  D  ++  A   +   ++ L  A+ YA   GK+IR  +  E   +   + 
Sbjct: 5   NKKEFDRILNTDKKIIDQAMKEKFVGDNPLNEALVYASDSGKRIRPIVFLETCRMLLGDK 64

Query: 69  -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +    ++E +H YSL+HDD+P MDN   RRGK TVH ++ E  AI+ G+ LL++A
Sbjct: 65  LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTG 186
           FE I      ++D    +    L    G  GM+ GQ+ DI+ ++  + + +  + K KT 
Sbjct: 125 FENI--LNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYKNKTS 182

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            L   A     +       + E+L  +   LG+ FQL DD+LD
Sbjct: 183 RLFMAALMMAGLYCQLDDEKLEKLENYAYYLGMAFQLQDDILD 225


>gi|329770468|ref|ZP_08261847.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325]
 gi|328836323|gb|EGF85989.1| hypothetical protein HMPREF0433_01611 [Gemella sanguinis M325]
          Length = 286

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           MN      + EN   ++    + +         +  + L  +I Y+L+  GKKIR     
Sbjct: 1   MNS-FEQFINENRNSLNIYAKEYIENL------EIPELLKESIIYSLVNDGKKIRPLSFL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                +N+++     V  AIE +H YSL+HDDLP MDN   R GKPT H  Y +  A++ 
Sbjct: 54  YLLKFYNIDYKEYFDVALAIELVHTYSLVHDDLPEMDNDDYRWGKPTNHRVYGQDIAVLT 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
           G+ +LT AFE++S  K+ + D ++  L+    +  G  GM+ GQ+ D   ++  +D   +
Sbjct: 114 GDSMLTLAFEVLS--KSNINDTLKVNLIQQFANYSGAMGMIAGQVYDVKQKNYQVDANYL 171

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            ++  +KTG L+    +    +A   +++ + +R FG+ LGI +Q+ DD+LD   +  K
Sbjct: 172 KLMHSLKTGRLIELPLDFACKIAR-KESDLDYIRSFGKELGIAYQIKDDILDYYGEFEK 229


>gi|304396333|ref|ZP_07378214.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB]
 gi|308189085|ref|YP_003933216.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1]
 gi|304355842|gb|EFM20208.1| Trans-hexaprenyltranstransferase [Pantoea sp. aB]
 gi|308059595|gb|ADO11767.1| octaprenyl diphosphate synthase [Pantoea vagans C9-1]
          Length = 323

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLSARAMGYKGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSMGS-----LRILALMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI+A A+  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPEEEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|262275074|ref|ZP_06052885.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Grimontia
           hollisae CIP 101886]
 gi|262221637|gb|EEY72951.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Grimontia
           hollisae CIP 101886]
          Length = 323

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L               +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLAVLSGRALGYQGEGHITAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AMFGNAASVLVGDYIYTRSFQMMTELRS-----LRILDLMSKATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+A AS+  +  ++ +G  LG  FQL DD++
Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILADASEEIETAMQDYGRYLGTAFQLIDDVM 214

Query: 229 DCEE 232
           D   
Sbjct: 215 DYTS 218


>gi|207091726|ref|ZP_03239513.1| geranyltranstransferase [Helicobacter pylori HPKX_438_AG0C1]
 gi|207108226|ref|ZP_03242388.1| geranyltranstransferase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 303

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H++  H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLKNHHLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNASLRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SNA--LLESHIIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238


>gi|261250197|ref|ZP_05942773.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           orientalis CIP 102891]
 gi|260939313|gb|EEX95299.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           orientalis CIP 102891]
          Length = 345

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 65  GGKRIRPLLAVLSARALGYQGEAHTTSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 123 AAFGNAASVLVGDFIYTRSFQMMTELGS-----LKILKLMSDAVNVIAEGEV-QQLMNCN 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GAI+  A ++ +  L+ +G+ LG  FQL DD++
Sbjct: 177 NPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPEDVELALQNYGKYLGTAFQLIDDVM 236

Query: 229 DCEED 233
           D   D
Sbjct: 237 DYTSD 241


>gi|56461237|ref|YP_156518.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
 gi|56180247|gb|AAV82969.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
          Length = 295

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 85/233 (36%), Positives = 130/233 (55%), Gaps = 11/233 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           + S      +++D+ L   L Q         N RL  A+++  L+GGK+IR +L+   A 
Sbjct: 3   INSLTAATREQVDSFLKQALAQL------TLNPRLNQAMQHGVLMGGKRIRPYLLVTVAD 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   N   AL+  AA+E IH YSLIHDDLP+MD+  +RRG+PT HI YDE TAI+AG+ L
Sbjct: 57  ICGANKNDALQAAAAVELIHAYSLIHDDLPAMDDDDLRRGQPTCHIAYDEATAILAGDAL 116

Query: 124 LTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
            T AFE+++  + + L    + QL+  L    G +GM  GQ +D+Q   + + E  +  +
Sbjct: 117 QTLAFEVLTENRMEQLPSERQLQLVQVLAKASGARGMCAGQAIDLQATAKIVTEDALEQM 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADDLLDCEE 232
              KTGAL+  A   G +  + +  + +E+   F   LG+ FQ+ DD+LD   
Sbjct: 177 HLSKTGALITAAATMGVLCGNDNAQQWREKFEQFAHYLGLAFQVQDDILDVTG 229


>gi|20429105|emb|CAD24417.1| decaprenyl diphosphate synthase [Paracoccus zeaxanthinifaciens]
          Length = 333

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 9/233 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           +   +   L   ++ +   ++ +       M ++H  R+     + +  GGK++R  L  
Sbjct: 3   VQEDVRKPLDRLAEALAPEMEAVNALIRERMASRHAPRIPEVTAHLIEAGGKRLRPMLTL 62

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ 
Sbjct: 63  AAAKLLGYGGPYHVHLAATVEFIHTATLLHDDV--VDESRQRRGRPTANLLWDNKSSVLV 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   +F+++  P +     +R+  +LS       +G +  Q+   QD   +E     
Sbjct: 121 GDYLFARSFQLMVEPGS-----MRTLEILSNAAATIAEGEVL-QLTAAQDLATNEDIYLQ 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + + KT AL   A E G ++A     +   L  +G+ LGI FQ+ DDLLD   
Sbjct: 175 VVRGKTAALFSAATEVGGVIAGVPDAQVRALFDYGDALGIAFQIVDDLLDYGG 227


>gi|332877798|ref|ZP_08445537.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684263|gb|EGJ57121.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 327

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 108/227 (47%), Gaps = 14/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD +  + A     +    L + IRY L +GGK+IR  L+    +L+           
Sbjct: 6   ELLDYINGEIAGMSFERQPAELYAPIRYVLSMGGKRIRPVLMLMAYNLYKEKVEVIGSQA 65

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE  H Y+L+HDDL  MD   +RRG  TVH ++D+  AI++G+ +L  A+  +     
Sbjct: 66  MAIEIYHNYTLLHDDL--MDRADMRRGMATVHKKWDDNAAILSGDSMLVMAYRYMQQ--- 120

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFAC 193
                    +M   T      G   GQ  DI+ E    + E +   + ++KT  L+  A 
Sbjct: 121 GCPVEQLGNVMGLFTETALEIGE--GQQYDIEFETRADVSEEEYIEMIRLKTSVLLACAL 178

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           + GA +  A + + E L  FGENLG+ FQL DD LD   D     KK
Sbjct: 179 KIGAWLGDAPRQDAELLYRFGENLGLAFQLQDDYLDVYGDPAVFGKK 225


>gi|292659743|pdb|3LLW|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori 26695
 gi|292659744|pdb|3LLW|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori 26695
 gi|292659745|pdb|3LLW|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori 26695
 gi|292659746|pdb|3LLW|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori 26695
          Length = 311

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 16  ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 75

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 76  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 135

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 136 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 193

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 194 SASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 240


>gi|257081234|ref|ZP_05575595.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
 gi|256989264|gb|EEU76566.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
          Length = 293

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFITEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|258405879|ref|YP_003198621.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798106|gb|ACV69043.1| Polyprenyl synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 292

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 12/234 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
             +L+   + +++ L+  L         +    L  ++RY+LL GGK++R  L    A L
Sbjct: 3   KQRLELYRREVESFLEQCLDAR------RMPATLYESMRYSLLAGGKRVRPVLCLVWAEL 56

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +    L   + +ECIH YSL+HDDLP+MD+  +RRGKP+ H Q+ E  AI+AG+GLL
Sbjct: 57  LGGDRQAVLPFASGLECIHTYSLVHDDLPAMDDDDLRRGKPSNHKQFGEAMAILAGDGLL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQ 181
           T+AFE++      L      +    +    G  GM+GGQ+ DIQ       +   +  + 
Sbjct: 117 THAFELM--LHADLPAERLVRAAGLVAGAAGASGMIGGQVTDIQLTGSGATNVEDLRAMH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            MKTGAL+  AC SGA++A A + + +R   +G  LG+ FQ+ADD+LD   D  
Sbjct: 175 GMKTGALLQVACTSGAVLAGAIEEDIQRAATYGGALGLAFQVADDILDVVGDEA 228


>gi|83311261|ref|YP_421525.1| geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
           AMB-1]
 gi|82946102|dbj|BAE50966.1| Geranylgeranyl pyrophosphate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 339

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + ++++ ++++  + D +      M  Q    +++A      GGK++R  L    A
Sbjct: 19  DALVALVKDDLQKVNHAIVDRMHSPV-EMIPQLAGHIIAA------GGKRLRPVLTLASA 71

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L        +++ A +E IH  +L+HDD+  +D   +RRG+ + +  +    +++ G+ 
Sbjct: 72  KLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGDF 129

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++    +     +    +LS   ++  +G +  Q++   D    E     + +
Sbjct: 130 LFSRSFELMVEDGS-----LSVLAILSRASSVIAEGEVL-QLITANDTETSEDSYLEVIR 183

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT AL   AC  GA++A   + E+E L  +G NLGI FQL DD+LD   
Sbjct: 184 SKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSA 233


>gi|319789063|ref|YP_004150696.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
 gi|317113565|gb|ADU96055.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
          Length = 324

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 11/225 (4%)

Query: 14  KRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           K  + + ++LL   + +  + +     +L A  Y L  GGK++R  L      L      
Sbjct: 5   KPFEVVREELLSVEEFSRELLSSKVSLVLRAGGYILDSGGKRVRPGLTVIAGKLVEAPLD 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             + V   +E +H  +L+HDD+  +D   +RRG+P+V+  +    A++ G+ +   A  +
Sbjct: 65  RLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRPSVNAVFGNDVAVLVGDYMFAKAIYV 122

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++           ++ +  +     L      Q+  I D  + E + F I   KT +L+ 
Sbjct: 123 LAVYGGPEVLKTAAKTVQDMAEGELL------QLEKIGDINLTEEEYFDIIYRKTASLLS 176

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             CE GAI+  AS+ E++ L+ +G  +G  FQL DD  D   D  
Sbjct: 177 TCCECGAIVGGASEKERKALKDYGTYIGYAFQLVDDAFDYISDEK 221


>gi|222444999|ref|ZP_03607514.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434564|gb|EEE41729.1| hypothetical protein METSMIALI_00615 [Methanobrevibacter smithii
           DSM 2375]
          Length = 335

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 7/204 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            + L  A  Y    GGK +R  L    +     +   +L+  AAIE IH +SLIH     
Sbjct: 32  PNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDI 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKP VH  +DE  AI+AG+ L + AFEII +   +     +    L+ T   
Sbjct: 90  MDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPTQLSQTLA-TVAD 148

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               +  GQ  D+  E    + E +   +   KTGAL+  A ++GAIM  A+Q   + + 
Sbjct: 149 ACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMY 208

Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
            +G  +G+ FQ+ DD LD   D  
Sbjct: 209 DYGRLIGLAFQIQDDYLDLASDEE 232


>gi|29375563|ref|NP_814717.1| geranyltranstransferase [Enterococcus faecalis V583]
 gi|227555091|ref|ZP_03985138.1| geranyltranstransferase [Enterococcus faecalis HH22]
 gi|257418572|ref|ZP_05595566.1| polyprenyl synthetase [Enterococcus faecalis T11]
 gi|29343024|gb|AAO80787.1| geranyltranstransferase [Enterococcus faecalis V583]
 gi|227175759|gb|EEI56731.1| geranyltranstransferase [Enterococcus faecalis HH22]
 gi|257160400|gb|EEU90360.1| polyprenyl synthetase [Enterococcus faecalis T11]
 gi|315168053|gb|EFU12070.1| geranyltranstransferase [Enterococcus faecalis TX1341]
          Length = 293

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|310943001|pdb|3P8L|A Chain A, Crystal Structure Of Polyprenyl Synthase From Enterococcus
           Faecalis V583
 gi|310943002|pdb|3P8L|B Chain B, Crystal Structure Of Polyprenyl Synthase From Enterococcus
           Faecalis V583
          Length = 302

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 88/241 (36%), Positives = 136/241 (56%), Gaps = 15/241 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L +  Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    
Sbjct: 9   SLTNFSQQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTV 62

Query: 63  SLFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + F     T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+
Sbjct: 63  AAFQKEMETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFM 179
           GLLT AF+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  
Sbjct: 123 GLLTGAFQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVSGQMGDIEGEKVSLTLEELAA 180

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + + KTGAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL K
Sbjct: 181 VHEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGK 240

Query: 237 K 237
           K
Sbjct: 241 K 241


>gi|114564252|ref|YP_751766.1| trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB
           400]
 gi|114335545|gb|ABI72927.1| Trans-hexaprenyltranstransferase [Shewanella frigidimarina NCIMB
           400]
          Length = 323

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSVLAARTVDYQGEHHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       +N++   +L+ T N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTEL-----ENMKVLQVLAHTTNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +   ++A+ S  +++ L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEANYMRVIYCKTAKLFEAATQLAGVLANVSPEQEQALADYGKYLGTAFQLTDDLL 214

Query: 229 DCEE---DLPK 236
           D      +L K
Sbjct: 215 DYTANADELGK 225


>gi|317182228|dbj|BAJ60012.1| geranyltranstransferase [Helicobacter pylori F57]
          Length = 303

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H ++ H     +     L GGK+ R  L      +L            
Sbjct: 14  ERFESFLNHHHLHFESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++   IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALGIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|302383899|ref|YP_003819722.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194527|gb|ADL02099.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 301

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 90/233 (38%), Positives = 134/233 (57%), Gaps = 6/233 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
            +  ++ E +  +   LD+LL +           RL  A+RYA LG GK++R +   E +
Sbjct: 11  SVADRVAEVADMVTVALDELLPRADGP-----EVRLTEAMRYAALGPGKRLRPYFAMEAS 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF++     LR   A+EC+H YSL+HDDLP MD+  +RRG+PT+H  YDE TA++AG+ 
Sbjct: 66  RLFDIEERPVLRAACALECVHAYSLVHDDLPCMDDDDMRRGRPTLHRAYDEATAVLAGDA 125

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T AF+I+    T    NIR  L   L+   G +GM GGQM+D+     D   V  +Q+
Sbjct: 126 LQTAAFDILLHEDTHEDANIRCALAARLSLASGARGMAGGQMVDLLGVRDDLEGVARMQR 185

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +KTGAL  +A E   I+A A++   + L  F  ++G+ +Q+ DDLLD + D  
Sbjct: 186 LKTGALFTYAFEIPLIVARANERHCQALTDFAHDIGLAYQIVDDLLDFDGDEA 238


>gi|325281282|ref|YP_004253824.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712]
 gi|324313091|gb|ADY33644.1| Geranyltranstransferase [Odoribacter splanchnicus DSM 20712]
          Length = 325

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 15/229 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+ + + +  +       +    L   I+Y +  GGK++R  L     +L+  +   AL+
Sbjct: 5   IEQLREVIKAELDKQEYVEEPYSLFEPIKYIMEDGGKRLRPVLTLMAYNLYRDDIGKALK 64

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               IE  H Y+L+HDD+  MD+  +RRG+ TVH +++   AI++G+     A++ I + 
Sbjct: 65  SAIGIEIFHNYTLLHDDV--MDDAELRRGRQTVHKKWNSNVAILSGDAAAITAYKYIETC 122

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCF 191
                ++   + ++   + + +  +  GQ  D++ E  D   E +   +  +KT  L+  
Sbjct: 123 -----EDPYLRRVIDGFNQVAMD-VCKGQQYDMEFETRDDVTEEEYIQMIYLKTSVLIAG 176

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +   GA++A A ++E + L  FG  LG++FQL DD LD   D     KK
Sbjct: 177 SMRHGALIAGAPEHEYKELYDFGGYLGLVFQLQDDYLDVYGDVEEFGKK 225


>gi|270157822|ref|ZP_06186479.1| geranyltranstransferase [Legionella longbeachae D-4968]
 gi|289163911|ref|YP_003454049.1| geranyltranstransferase [Legionella longbeachae NSW150]
 gi|269989847|gb|EEZ96101.1| geranyltranstransferase [Legionella longbeachae D-4968]
 gi|288857084|emb|CBJ10899.1| geranyltranstransferase [Legionella longbeachae NSW150]
          Length = 293

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           + SAI Y+L  GGK+IR  LV    SL +V+      + AA+E  HCYSLIHDDLP+MDN
Sbjct: 27  IRSAIDYSLFPGGKRIRPILVYLTGSLLDVDLNILDAIAAAVELTHCYSLIHDDLPAMDN 86

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM-LSLTHNIGL 156
             +RRG+P+ H  +DE TAI+AG+G+   A +++ +    L    R   +   L    G+
Sbjct: 87  DDLRRGRPSCHKAFDEATAILAGDGMQALAIDVLLTYLPHLVQPDRIISITRELVQATGI 146

Query: 157 QGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            GM+ GQ LD+ +     ID+ ++  I  +KTG L+    E    +    +  +  LR +
Sbjct: 147 SGMVSGQSLDLSELAKSSIDDERLKEIHHLKTGRLILACIEMVLRIQSTPEAYQSALRTY 206

Query: 214 GENLGIIFQLADDLLDC 230
             ++G++FQ+ DD LD 
Sbjct: 207 ANHIGLVFQMQDDYLDY 223


>gi|312963291|ref|ZP_07777774.1| geranyltranstransferase [Pseudomonas fluorescens WH6]
 gi|311282371|gb|EFQ60969.1| geranyltranstransferase [Pseudomonas fluorescens WH6]
          Length = 295

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 130/241 (53%), Gaps = 13/241 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +    +  R++  L+ L +  +  M+     RL  A+RY+++ GGK++R  L      
Sbjct: 2   IDAYQASSQARVNAALEPLFVAPSPQMK-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGAPAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEAYAILAGDGL 116

Query: 124 LTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
            + AF  +  P  + +   IR +++ +L    G  GM+GGQ +D+      +D+  +  +
Sbjct: 117 QSLAFSALLDPGLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDMGSVSLKLDQQALEHM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KTGAL+  A + GA+ +  A   +   L+ +   +G+ FQ+ DD+LD E D   L K
Sbjct: 177 HRHKTGALIEAAVQLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESDTATLGK 236

Query: 237 K 237
           +
Sbjct: 237 R 237


>gi|213417843|ref|ZP_03350948.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 268

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 8/207 (3%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP+MD+
Sbjct: 1   MVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDD 60

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGL 156
             +RRG PT HI++ E  AI+AG+ L T AF IIS  P  ++ D  R  ++  L +  G+
Sbjct: 61  DDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELANASGI 120

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCF 213
            GM GGQ LD+  E   I    +  I + KTGAL+  A   GA+ A    +N    L  +
Sbjct: 121 AGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRY 180

Query: 214 GENLGIIFQLADDLLDCEED---LPKK 237
            E++G+ FQ+ DD+LD   D   L K+
Sbjct: 181 AESIGLAFQVQDDILDVVGDTATLGKR 207


>gi|300721522|ref|YP_003710797.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC
           19061]
 gi|297628014|emb|CBJ88563.1| octaprenyl diphosphate synthase [Xenorhabdus nematophila ATCC
           19061]
          Length = 323

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +               ++V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAGKALQCGDEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AIYGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSDATNVIAEGEVM-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  S AI+A+A+  ++  LR +G  LG  FQL DDLL
Sbjct: 155 DPDISEDDYMRVIYSKTARLFEVAAHSAAILANATPEQEIALRDYGCYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDSD 219


>gi|262164113|ref|ZP_06031852.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus VM223]
 gi|262027641|gb|EEY46307.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus VM223]
          Length = 323

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAVLSAKALGYQGSNHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|150401609|ref|YP_001325375.1| polyprenyl synthetase [Methanococcus aeolicus Nankai-3]
 gi|150014312|gb|ABR56763.1| Polyprenyl synthetase [Methanococcus aeolicus Nankai-3]
          Length = 320

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 12/216 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L ++   + Q     +L  A ++ L  GGK+IR +L      L   +    L    ++E 
Sbjct: 10  LKIEEELNRQVNKEGKLYEASKHLLFAGGKRIRPYLSVLTYLLKKDDIDEVLTPAVSVEL 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH YSLIHDD+  MDN   RRGKPTVHI Y E  AI+AG+ L T AF  IS  +   K +
Sbjct: 70  IHGYSLIHDDI--MDNDSERRGKPTVHIVYGEPIAILAGDLLNTLAFNAISQMENLEKAH 127

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGA 197
              +++     +     +  GQ  D++ E         + F +   KTGAL+    E GA
Sbjct: 128 EILKIV-----SKASVKVCEGQATDMEFEEREVIPTIDEYFDMISKKTGALIVAPIEIGA 182

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +MA  ++ E++ +  + + +G+ FQ+ DD+LD   D
Sbjct: 183 VMADFTEEERKAICEYAKRIGMTFQIQDDVLDLIGD 218


>gi|23099243|ref|NP_692709.1| heptaprenyl diphosphate synthase component II [Oceanobacillus
           iheyensis HTE831]
 gi|22777472|dbj|BAC13744.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Oceanobacillus iheyensis HTE831]
          Length = 323

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 18/231 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L+++ + I++ L D +      ++    + L +       GGK+IR   V   + L N +
Sbjct: 10  LKKDMESIESALQDSIQANHPVLRDASTELLHA-------GGKRIRPVFVLLSSQLGNYD 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V   +E IH  +L+HDD+  +D   +RRGKPT    Y    A+  G+ +L  A 
Sbjct: 63  LSKIKKVAVTLELIHMATLVHDDV--IDEAELRRGKPTTASIYGNRVAMYTGDYILARAL 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E I+        + R   +LS T      G +  Q+    +   +        K KT  L
Sbjct: 121 EEITEI-----PDPRVHQLLSKTLVEVSIGEIE-QIEYKFNWEQNFRDYLRRIKRKTALL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           +  +C+ GAI+   +  +  +L  +G  +G+ +Q+ DD+LD      +L K
Sbjct: 175 IASSCKLGAIVGGLNDYQTNKLYQYGYYIGMSYQIIDDILDFTSTSKELGK 225


>gi|288960115|ref|YP_003450455.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510]
 gi|288912423|dbj|BAI73911.1| octaprenyl-diphosphate synthase [Azospirillum sp. B510]
          Length = 342

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+   ++ I+ D + Q+   M  Q    L++A      GGK++R  L    A
Sbjct: 22  DDLTALVAEDLSAVNQIILDRM-QSQVEMIPQLAGYLIAA------GGKRLRPVLTLAAA 74

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L          + A +E IH  +L+HDD+  +D   +RRG  + +  +    +++ G+ 
Sbjct: 75  NLCGYQGEHHRLLAAVVEFIHSATLLHDDV--VDESDLRRGMASANAVFGNKASVLVGDF 132

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + AFE++   ++     +    +LS    I  +G +  Q+    D    E     + K
Sbjct: 133 LFSRAFEMMVEVQS-----LDVLRILSGASAIIAEGEVL-QLRTTNDTETSEQAYLEVIK 186

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   AC  GA++A+  Q E+  L  +G NLGI FQL DD+LD   
Sbjct: 187 GKTAELFAAACRVGAVVANRPQAEELALYDYGMNLGIAFQLVDDVLDYSA 236


>gi|110833312|ref|YP_692171.1| transferase [Alcanivorax borkumensis SK2]
 gi|110646423|emb|CAL15899.1| transferases [Alcanivorax borkumensis SK2]
          Length = 307

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 13/216 (6%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           Q  SH    +   +     Y +  GGK++R  +   CA          + V A IE +H 
Sbjct: 3   QFISHHLDSNVPLIREVGDYIIQSGGKRLRPLIAVLCARASGYQGSRHVDVAAIIEFLHT 62

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +L+HDD+  +D   +RRG+PTV+  +    +++ G+ L++ A +++ + +     + R 
Sbjct: 63  ATLLHDDV--VDESNLRRGRPTVNAVWGNAASVLVGDFLISRALQLMVALR-----HPRL 115

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS- 203
             + S + N   +G +  Q+++++D    E     +   KT  +   A E+GA++     
Sbjct: 116 LDIFSQSTNTISEGEVL-QLINVRDPNTSEDNYMRVIHHKTAKMFESAAETGAVLGANDV 174

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            +  +    +G +LGI FQL DD+LD + D   L K
Sbjct: 175 SDHVDAFATYGRHLGIAFQLIDDVLDYQGDASELGK 210


>gi|288869706|ref|ZP_05975848.2| short chain isoprenyl diphosphate synthase [Methanobrevibacter
           smithii DSM 2374]
 gi|288861214|gb|EFC93512.1| short chain isoprenyl diphosphate synthase [Methanobrevibacter
           smithii DSM 2374]
          Length = 335

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 7/204 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            + L  A  Y    GGK +R  L    +     +   +L+  AAIE IH +SLIH     
Sbjct: 32  PNNLQEASIYLTKAGGKMLRPALTLITSEAVGGSRDNSLKSAAAIELIHTFSLIH--DDI 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRGKP VH  +DE  AI+AG+ L + AFEII +   +     +    L+ T   
Sbjct: 90  MDDDDMRRGKPAVHKVWDENVAILAGDTLFSKAFEIIMNSDPEKNTPAQLSQTLA-TVAD 148

Query: 155 GLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               +  GQ  D+  E    + E +   +   KTGAL+  A ++GAIM  A+Q   + + 
Sbjct: 149 ACVKICEGQASDMSFEDRYDVSEEEYLDMIFKKTGALIAAASKAGAIMGGANQEVIDAMY 208

Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
            +G  +G+ FQ+ DD LD   D  
Sbjct: 209 DYGRLIGLAFQIQDDYLDLASDEE 232


>gi|148284169|ref|YP_001248259.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str.
           Boryong]
 gi|146739608|emb|CAM79381.1| octaprenyl-diphosphate synthase [Orientia tsutsugamushi str.
           Boryong]
          Length = 338

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 8/227 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           S + + S  +D  + ++     + + +     +     Y    GGK+IR  L    + LF
Sbjct: 11  SFIDKLSNFLDKDMSEVNNVILNCISSSQEQLIYEVGTYFFNAGGKRIRPMLTIIISKLF 70

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N + L+   + AA+E IH  +L+HDD+  +D   +RR  PTVH+++D  T+I+ G+ L +
Sbjct: 71  NYHGLSHYYLAAAVELIHSATLLHDDV--VDESKMRRSHPTVHLKWDTKTSILIGDFLFS 128

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +F+++        ++IR+    SL+ N  + G +         + I E + F + + KT
Sbjct: 129 QSFKLMIK-----SNSIRALKSFSLSFNTIITGEVKQLTQLHNQKIITEDEYFRVIQAKT 183

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             L   +CE  AI+++ S      ++ FG  LG+IFQ+ DD+LD   
Sbjct: 184 AELFGTSCEIAAIISNQSAPTCLLVKTFGIKLGLIFQIVDDILDYFG 230


>gi|315149503|gb|EFT93519.1| geranyltranstransferase [Enterococcus faecalis TX0012]
          Length = 293

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|319944647|ref|ZP_08018914.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599]
 gi|319742086|gb|EFV94506.1| octaprenyl-diphosphate synthase [Lautropia mirabilis ATCC 51599]
          Length = 329

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 22/234 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E+   +D ++ + L    + ++T        A      GGK++R  L+T  A      
Sbjct: 10  ISEDLAEVDRVIKERLDSPVALIRTI-------ATYIISAGGKRLRPVLLTLFARALGYG 62

Query: 69  HLTALRV-------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                R         A +E IH  +L+HDD+  +D   +RRG PT + Q+    +++ G+
Sbjct: 63  QTEQQRAQGHHWLMAAVVEFIHTATLLHDDI--VDESTLRRGAPTANAQFGNAASVLVGD 120

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + +F+++        + +     L+   N+  +G +  Q+L+  D  +DE     + 
Sbjct: 121 FLYSRSFQMMVE-----VEQLHILKTLADATNVIAEGEVL-QLLNCNDPDVDEAAYLQVI 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + KT  L   +   GA++A A+   ++    +G +LG  FQ+ DD+LD   +  
Sbjct: 175 RFKTAKLFEASARIGAVLAGATPELEDAAAAYGRHLGTAFQIIDDVLDYSGESE 228


>gi|167645671|ref|YP_001683334.1| polyprenyl synthetase [Caulobacter sp. K31]
 gi|167348101|gb|ABZ70836.1| Polyprenyl synthetase [Caulobacter sp. K31]
          Length = 303

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 119/233 (51%), Gaps = 9/233 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTEC 61
                +++     +D  L DL     S       DRL+ A+RY  L  GK+ R  +    
Sbjct: 11  AAFLQRVEALRAGVDRRLADLAPAVGSA-----PDRLVEAVRYCLLAPGKRFRPMVTLLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+       +AL    A E IH  SLI DDLP+MD+  +RRG PT+H  +DE TAI+AG 
Sbjct: 66  AAECGAPEGSALDAACAFEMIHAASLILDDLPAMDDAGLRRGLPTIHRAFDEATAILAGV 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFM 179
           GLL  A+ +I+     L  ++R++L     H +G  G++ GQ  D   +D+  D   +  
Sbjct: 126 GLLNQAYAVIA-ADQGLPGSLRAELTARAAHAVGFSGLIAGQARDLFDRDQIRDPAALER 184

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KTG L+  A + GA++A A +   E    F  ++G+ FQ+ DDL+D + 
Sbjct: 185 LNHEKTGVLIIAAAQGGALVAGAPEATVEAFGTFARHIGLAFQIRDDLIDAQG 237


>gi|254435950|ref|ZP_05049457.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
 gi|207089061|gb|EDZ66333.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
          Length = 322

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 19/226 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           DL+      +      RL S +        Y +  GGK++R  +V   A  F       +
Sbjct: 8   DLVADDMQAVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFGYQGSYHI 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A IE IH  +L+HDD+  +D+  +RRG+ T +  +    +++ G+ L + AFE++  
Sbjct: 68  DIAAIIEFIHTATLLHDDV--VDSSDLRRGRKTANNIWGSEASVLVGDFLYSRAFEMMVG 125

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D++R   +L+ T N   +G +  Q+L+  +    E     I + KT  L   A 
Sbjct: 126 -----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAKLFEAAT 179

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + GA++ H    E++ +  +G +LG  FQL DD+LD     EDL K
Sbjct: 180 QLGAVLCHRPSAEEKLMAAYGMHLGTAFQLTDDVLDYSSFSEDLGK 225


>gi|256962594|ref|ZP_05566765.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
 gi|257086340|ref|ZP_05580701.1| polyprenyl synthetase [Enterococcus faecalis D6]
 gi|307271992|ref|ZP_07553259.1| geranyltranstransferase [Enterococcus faecalis TX0855]
 gi|256953090|gb|EEU69722.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
 gi|256994370|gb|EEU81672.1| polyprenyl synthetase [Enterococcus faecalis D6]
 gi|306511339|gb|EFM80342.1| geranyltranstransferase [Enterococcus faecalis TX0855]
 gi|315026958|gb|EFT38890.1| geranyltranstransferase [Enterococcus faecalis TX2137]
          Length = 293

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 88/235 (37%), Positives = 135/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +    M  L    G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLL--MQKLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|70732635|ref|YP_262398.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
 gi|68346934|gb|AAY94540.1| octylprenyl diphosphate synthase [Pseudomonas fluorescens Pf-5]
          Length = 322

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  +
Sbjct: 100 NAMWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMRILSQATRIIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A++ + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALAGATEEQAEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|315574274|gb|EFU86465.1| geranyltranstransferase [Enterococcus faecalis TX0309B]
 gi|315581571|gb|EFU93762.1| geranyltranstransferase [Enterococcus faecalis TX0309A]
          Length = 293

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|313497049|gb|ADR58415.1| IspB [Pseudomonas putida BIRD-1]
          Length = 322

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEED 233
           LD + D
Sbjct: 214 LDYKGD 219


>gi|297537721|ref|YP_003673490.1| trans-hexaprenyltranstransferase [Methylotenera sp. 301]
 gi|297257068|gb|ADI28913.1| Trans-hexaprenyltranstransferase [Methylotenera sp. 301]
          Length = 332

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 9/193 (4%)

Query: 41  SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
               Y +  GGK++R  LV     LF        ++ A +E IH  +L+HDD+  +D   
Sbjct: 44  QVAHYIVNSGGKRLRPILVLLSGGLFGEVKPEHHQLAAVVEFIHTATLLHDDV--VDESS 101

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRG+ T +  +    +++ G+ + + AF+++ + +     N+R   +LS   N+  +G 
Sbjct: 102 KRRGQNTANAIFGNAASVLVGDFVYSRAFQMMVAVQ-----NMRVMEVLSNATNVIAEGE 156

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +  Q+L+I +  + +     +   KT  L   A   GAI+++AS +++E L  +G ++G 
Sbjct: 157 VL-QLLNIHNADVTDGAYLQVIHYKTAKLFEAATRLGAIISNASPSDEEALSQYGMHIGT 215

Query: 220 IFQLADDLLDCEE 232
            FQL DD+LD   
Sbjct: 216 AFQLIDDVLDLSG 228


>gi|296116237|ref|ZP_06834855.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977343|gb|EFG84103.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 295

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 94/238 (39%), Positives = 146/238 (61%), Gaps = 11/238 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           L + L   ++ ++  +D LL             RL+ A+RYA L GGK++R +LV E AS
Sbjct: 4   LRASLAARAEAVEHTIDRLLAPVNG-----GEARLIDAMRYATLGGGKRLRGYLVAEVAS 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F V    A R  A++E +H YSL+HDDLP+MD+  +RRG+P+ H ++DE TAI+AG+ L
Sbjct: 59  MFKVEEAGAYRAAASVEMLHAYSLVHDDLPAMDDDDLRRGQPSTHRKFDEATAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
            T AF I++ P T     +R  L+ +L    G  GM+GGQM+D++ E   +   +V  + 
Sbjct: 119 QTMAFGILADPATHRDAGVRIDLVTTLAAASGAAGMVGGQMIDMEGEGRSLSLEEVARLH 178

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +KTG L+ ++ E+GAI+  A+ + +ER+  +G +LG  FQ+ADD+LD     E+L K
Sbjct: 179 ALKTGCLIRYSAEAGAILGQAAPDLRERIAAYGRDLGAAFQVADDVLDATASAEELGK 236


>gi|94497294|ref|ZP_01303865.1| Polyprenyl synthetase [Sphingomonas sp. SKA58]
 gi|94423157|gb|EAT08187.1| Polyprenyl synthetase [Sphingomonas sp. SKA58]
          Length = 302

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 100/235 (42%), Positives = 144/235 (61%), Gaps = 8/235 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            + ++ ++ +  ID   D LL      +      RL  A+R+A + GGK++R  LV    
Sbjct: 10  DMLARARDVAAHIDMGFDRLLA-----VPDDARARLYDAMRHAAIGGGKRLRPLLVQAAC 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF+++  +ALRVG AIECIH YSLIHDDLP+MD+  +RRGKPTVH  +DE TAI+AG+ 
Sbjct: 65  DLFHISRESALRVGLAIECIHVYSLIHDDLPAMDDDDMRRGKPTVHKAFDEATAILAGDC 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           L   AFE+++  +T     +R +L+ +L    G  GM GGQM+D++ E    D   V  +
Sbjct: 125 LHDLAFEVLADAETHPDPFVRIELVKALATCSGPAGMAGGQMMDLEAERTRFDLATVTRL 184

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q +KTGAL+CF  E+ AIMA   Q  +  L  +  ++G+ FQ+ADDLLD E D+ 
Sbjct: 185 QNLKTGALICFCVEAAAIMARLPQEARTGLHGYARDIGLAFQIADDLLDVEGDVA 239


>gi|238752774|ref|ZP_04614243.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380]
 gi|238709032|gb|EEQ01281.1| Geranyltranstransferase [Yersinia rohdei ATCC 43380]
          Length = 306

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 89/245 (36%), Positives = 134/245 (54%), Gaps = 13/245 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           +      +L  + +R++  + D +           N  L+ A+RY A+LGGK++R +LV 
Sbjct: 6   LTVDFNQQLAAHQQRVNQAILDFIAPL-----PFGNSDLVKAMRYGAVLGGKRLRPYLVY 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +F ++        AAIECIH YSLIHDDLP+MD+  +RRG+PT H+++ E  AI+A
Sbjct: 61  ATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANAILA 120

Query: 120 GNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G+ L T AF I+S      + D  R  ++  L H  G+ GM GGQ LD++ E   I  T 
Sbjct: 121 GDALQTLAFSILSEAAMPDVADKDRLSMIAELAHASGVAGMCGGQALDLEAEARQISLTD 180

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEED-- 233
           +  I + KTGAL+  A   GA+ A A+  E    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 181 LEQIHRHKTGALIRAAVRLGALAAGAAGREALPLLDRYANAIGLAFQVQDDILDVIGDTA 240

Query: 234 -LPKK 237
            + K+
Sbjct: 241 TIGKR 245


>gi|227517904|ref|ZP_03947953.1| geranyltranstransferase [Enterococcus faecalis TX0104]
 gi|229548922|ref|ZP_04437647.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200]
 gi|255971435|ref|ZP_05422021.1| polyprenyl synthetase [Enterococcus faecalis T1]
 gi|255974048|ref|ZP_05424634.1| polyprenyl synthetase [Enterococcus faecalis T2]
 gi|256617904|ref|ZP_05474750.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761737|ref|ZP_05502317.1| polyprenyl synthetase [Enterococcus faecalis T3]
 gi|256960163|ref|ZP_05564334.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
 gi|257089390|ref|ZP_05583751.1| polyprenyl synthetase [Enterococcus faecalis CH188]
 gi|257415599|ref|ZP_05592593.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG]
 gi|257421230|ref|ZP_05598220.1| geranyltranstransferase [Enterococcus faecalis X98]
 gi|293382531|ref|ZP_06628465.1| geranyltranstransferase [Enterococcus faecalis R712]
 gi|293387869|ref|ZP_06632408.1| geranyltranstransferase [Enterococcus faecalis S613]
 gi|307275463|ref|ZP_07556605.1| geranyltranstransferase [Enterococcus faecalis TX2134]
 gi|307278969|ref|ZP_07560028.1| geranyltranstransferase [Enterococcus faecalis TX0860]
 gi|312900452|ref|ZP_07759759.1| geranyltranstransferase [Enterococcus faecalis TX0470]
 gi|312904544|ref|ZP_07763702.1| geranyltranstransferase [Enterococcus faecalis TX0635]
 gi|312906866|ref|ZP_07765863.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512]
 gi|312952746|ref|ZP_07771608.1| geranyltranstransferase [Enterococcus faecalis TX0102]
 gi|312978879|ref|ZP_07790605.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516]
 gi|227074658|gb|EEI12621.1| geranyltranstransferase [Enterococcus faecalis TX0104]
 gi|229305943|gb|EEN71939.1| geranyltranstransferase [Enterococcus faecalis ATCC 29200]
 gi|255962453|gb|EET94929.1| polyprenyl synthetase [Enterococcus faecalis T1]
 gi|255966920|gb|EET97542.1| polyprenyl synthetase [Enterococcus faecalis T2]
 gi|256597431|gb|EEU16607.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682988|gb|EEU22683.1| polyprenyl synthetase [Enterococcus faecalis T3]
 gi|256950659|gb|EEU67291.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
 gi|256998202|gb|EEU84722.1| polyprenyl synthetase [Enterococcus faecalis CH188]
 gi|257157427|gb|EEU87387.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG]
 gi|257163054|gb|EEU93014.1| geranyltranstransferase [Enterococcus faecalis X98]
 gi|291080079|gb|EFE17443.1| geranyltranstransferase [Enterococcus faecalis R712]
 gi|291082716|gb|EFE19679.1| geranyltranstransferase [Enterococcus faecalis S613]
 gi|295113841|emb|CBL32478.1| farnesyl-diphosphate synthase [Enterococcus sp. 7L76]
 gi|306504356|gb|EFM73567.1| geranyltranstransferase [Enterococcus faecalis TX0860]
 gi|306507851|gb|EFM76979.1| geranyltranstransferase [Enterococcus faecalis TX2134]
 gi|310627120|gb|EFQ10403.1| geranyltranstransferase [Enterococcus faecalis DAPTO 512]
 gi|310629262|gb|EFQ12545.1| geranyltranstransferase [Enterococcus faecalis TX0102]
 gi|310632057|gb|EFQ15340.1| geranyltranstransferase [Enterococcus faecalis TX0635]
 gi|311288316|gb|EFQ66872.1| geranyltranstransferase [Enterococcus faecalis DAPTO 516]
 gi|311292428|gb|EFQ70984.1| geranyltranstransferase [Enterococcus faecalis TX0470]
 gi|315153058|gb|EFT97074.1| geranyltranstransferase [Enterococcus faecalis TX0031]
 gi|315156830|gb|EFU00847.1| geranyltranstransferase [Enterococcus faecalis TX0043]
 gi|315157617|gb|EFU01634.1| geranyltranstransferase [Enterococcus faecalis TX0312]
 gi|315171919|gb|EFU15936.1| geranyltranstransferase [Enterococcus faecalis TX1342]
 gi|315577402|gb|EFU89593.1| geranyltranstransferase [Enterococcus faecalis TX0630]
          Length = 293

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786]
          Length = 294

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 117/235 (49%), Gaps = 10/235 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
               ++   +R++T L   L       +T    +L  A+RYA L GGK++R  L      
Sbjct: 3   FDQWMRSVLERVETALGHYLP-----AETVAPAQLHEAMRYAALGGGKRVRPLLCHAAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +        AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L
Sbjct: 58  LTGASEAALNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYDEATALLVGDAL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            + AF  ++       D   +  +  L    G  GM GGQ +D+      +    +  + 
Sbjct: 118 QSQAFVALTDAAALPLDRQPAL-VRELALASGSIGMAGGQAIDLASVGHALSRDALETMH 176

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MKTGAL+  +   GA+     S++    L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 RMKTGALLRASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILDVTTDSA 231


>gi|15602211|ref|NP_245283.1| IspB [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12720590|gb|AAK02430.1| IspB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 330

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     +    +     IE IH  +L+HDD+  +D   +RRG PT +
Sbjct: 50  GGKRIRPMIAILAARALGFHGEQPITCATFIEFIHTATLLHDDV--VDESALRRGNPTAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++       D++R   ++S   N+  +G +  Q++++ 
Sbjct: 108 AEFGNAASVLVGDFIYTRAFQLMTQL-----DSLRILKVMSDATNVIAEGEV-QQLMNVN 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    AI+AHA++ ++  LR +G  LG  FQL DD+L
Sbjct: 162 DPNTTEENYMQVIYGKTARLFEAATHCAAILAHATEAQENALREYGCYLGTAFQLVDDIL 221

Query: 229 DCEED 233
           D   D
Sbjct: 222 DYSAD 226


>gi|193214123|ref|YP_001995322.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087600|gb|ACF12875.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 335

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 19/230 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
           E   RI+  L   LL        +    L     Y L G GK++R  LV   A       
Sbjct: 19  EFHTRINEELQQCLL-------GKEPKSLYEPATYILTGKGKRVRPVLVLLGAESICGTS 71

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             AL +  ++E +H ++LIHDD+  MDN  +R G+ TVH++++E  AI++G+ +L +A+E
Sbjct: 72  DHALNLALSVEVLHNFTLIHDDI--MDNAALRHGRETVHLKWNENAAILSGDMMLAFAYE 129

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTG 186
           +     +      R   +L +     +  +  GQ  D+  E    +  ++   +   KTG
Sbjct: 130 LALKTNSS-----RLTKILDVITQSTIV-ICEGQTYDMDFEKRTDVTMSEYLDMISKKTG 183

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L+  + E G + A A+  +   L  +GE +G  FQ+ DDLLD   D  K
Sbjct: 184 RLIAASLELGGLAAEATDEQLAILTEYGELIGQAFQVQDDLLDIMADDKK 233


>gi|29653729|ref|NP_819421.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493]
 gi|161831382|ref|YP_001596323.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
 gi|29540992|gb|AAO89935.1| farnesyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
 gi|161763249|gb|ABX78891.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
          Length = 332

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 20/234 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
             L   +Q + + +D ++   + + +SH+       L+  I + ++  GGK++R  +V  
Sbjct: 13  ESLRQPVQNDIEAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63

Query: 61  CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A             +   IE IH  +L+HDD+  +D    RRG+ T +  +    +++ 
Sbjct: 64  TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + AF+I++      + N+    +L+ T N   +G +  Q+++  D  IDE   + 
Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ DDLLD  +D
Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKD 229


>gi|296272236|ref|YP_003654867.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096411|gb|ADG92361.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 286

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 111/185 (60%), Gaps = 5/185 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK+ R  L+    +  N     +AL V   +E +H YSL+HDDLP+MD+  +RRG  T
Sbjct: 36  AGGKRFRPMLLLSVVNSKNSLLIKSALPVALGLEMLHTYSLVHDDLPAMDDATLRRGFET 95

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H +YDEVTAI+ G+ L T AF  I++    L  +++ + +  L+ + G+ GM+ GQ +D
Sbjct: 96  LHKKYDEVTAILVGDALNTEAFNKIANA--PLSSDVKIECIKVLSSDGGIDGMIIGQAID 153

Query: 167 IQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              E   ++ +Q+  +   KT  L+  + + GAI+A+     +E+L  FG ++G++FQ+ 
Sbjct: 154 CFFENQKLELSQLEFLHIHKTAKLIAGSLKMGAIIANYDLAIQEKLYNFGIDIGLLFQIQ 213

Query: 225 DDLLD 229
           DD+LD
Sbjct: 214 DDILD 218


>gi|124265703|ref|YP_001019707.1| dimethylallyltransferase [Methylibium petroleiphilum PM1]
 gi|124258478|gb|ABM93472.1| Dimethylallyltransferase [Methylibium petroleiphilum PM1]
          Length = 330

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV   A            + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 50  AGGKRLRPMLVLLFAQALGFRGPERFELAATVEFIHTATLLHDDV--VDESALRRGRDTA 107

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    +++ G+ L + AF+++ S      + +R   +L+   N+  +G +  Q++++
Sbjct: 108 NARFGNAASVLVGDFLYSRAFQMMVS-----VNRMRVLEVLADATNVIAEGEVL-QLMNM 161

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +       + + KT  L   +   GA++A AS   +     +G  LG  FQL DDL
Sbjct: 162 HDPDLSIDDYLRVIRFKTAKLFEASARLGAMLADASPGVETACADYGRALGTAFQLVDDL 221

Query: 228 LDCEE 232
           LD E 
Sbjct: 222 LDYEG 226


>gi|260576245|ref|ZP_05844237.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
 gi|259021513|gb|EEW24817.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
          Length = 333

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 14/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + L  +   ++ ++ + +    +    Q    L+ A      GGK++R  L    A
Sbjct: 12  DRLAAFLAADMLAVNVLIRERMASEHAPRIPQVTAHLVEA------GGKRLRPLLTLAAA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  RLCGYGGPFHVHLAATVEFIHTATLLHDDV--VDESSRRRGRPTANLLWDNKSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +F+++  P      N+R   +L+       +G +  Q+   QD    E     + +
Sbjct: 124 LFARSFQLMVEPG-----NLRVLDILANASASIAEGEVL-QLTAAQDLATTEAIYLQVVR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT AL   A E G ++A A  ++ + L  +G+ LG+ FQ+ DDLLD   
Sbjct: 178 GKTAALFSAATEVGGVIAGAPADQVKALFTYGDALGVAFQIVDDLLDYGG 227


>gi|308183081|ref|YP_003927208.1| geranyltranstransferase [Helicobacter pylori PeCan4]
 gi|308065266|gb|ADO07158.1| geranyltranstransferase [Helicobacter pylori PeCan4]
          Length = 303

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 127/244 (52%), Gaps = 15/244 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN    S      +R ++ L+   L    H+++ H     +     L GGK+ R  L   
Sbjct: 1   MNNPNLSFYHNECERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLA 56

Query: 61  C-ASLFN-----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              +L              ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE 
Sbjct: 57  VLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDET 116

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--I 172
           TA++ G+ L TY+FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   +
Sbjct: 117 TAVLIGDALNTYSFELLSN--SLLESHIIVELVKILSANGGIKGMVLGQALDCYFENTPL 174

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +  Q+  + + KT  L+  +   G + +    +   + L+ FG  +G+ FQ+ DD++D  
Sbjct: 175 NLEQLTFLHEHKTAKLISASLMMGLVASGIKDEGLFKWLQDFGLKMGLCFQVLDDIIDVT 234

Query: 232 EDLP 235
           +D  
Sbjct: 235 QDEE 238


>gi|284006654|emb|CBA71916.1| octaprenyl-diphosphate synthase [Arsenophonus nasoniae]
          Length = 323

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIR  +               + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKKIRPMIAILVGRALGYEGKKHINVAALIEFIHTATLLHDDV--VDESTLRRGKKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTEL-----DSMPILKLMSDATNVIAEGEVS-QLINCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E+    I   KT  L   A  + AI++ A++ +++ LR +G  LG  FQL DDLL
Sbjct: 155 NPDITESTYMQIIYSKTARLFEAATHASAIVSGANETQQQALRDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|238793005|ref|ZP_04636634.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909]
 gi|238727605|gb|EEQ19130.1| Octaprenyl-diphosphate synthase [Yersinia intermedia ATCC 29909]
          Length = 323

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALHYEGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLES-----LRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A A++ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAASQSAAVLADATETQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|323493611|ref|ZP_08098732.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546]
 gi|323312134|gb|EGA65277.1| octaprenyl-diphosphate synthase [Vibrio brasiliensis LMG 20546]
          Length = 323

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPLLAVLSARALGYQGEAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----LKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A    +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNEAPAEVELALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|171059952|ref|YP_001792301.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
 gi|170777397|gb|ACB35536.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
          Length = 313

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 17/225 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           +     ++D ++   L    + +             Y +  GGK+IR  LV   A   + 
Sbjct: 1   MAAEMAQVDAVIHRRLASEVALINQIS--------HYIVSAGGKRIRPLLVLLFARALDF 52

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + A
Sbjct: 53  DGPERFEMAATVEFIHTATLLHDDV--VDESDLRRGRKTANAIFGNAASVLVGDFLYSRA 110

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+++ S      + +R   +L+   N+  +G +  Q+L++ D  I       + + KT  
Sbjct: 111 FQMMVS-----VNRLRVLDVLADATNVIAEGEVL-QLLNMHDPDISIEAYLRVIRYKTAK 164

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   +  +GA++A  S   ++    +G  LG  FQL DDLLD E 
Sbjct: 165 LFEASARTGAVLAGVSAPLEDSCASYGRCLGTAFQLIDDLLDYEG 209


>gi|317455530|pdb|3Q1O|A Chain A, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori Complexed With Magnesium And Isoprenyl
           Diphosphate
 gi|317455531|pdb|3Q1O|B Chain B, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori Complexed With Magnesium And Isoprenyl
           Diphosphate
 gi|317455532|pdb|3Q1O|C Chain C, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori Complexed With Magnesium And Isoprenyl
           Diphosphate
 gi|317455533|pdb|3Q1O|D Chain D, Crystal Structure Of Geranyltransferase From Helicobacter
           Pylori Complexed With Magnesium And Isoprenyl
           Diphosphate
          Length = 310

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFN-----VNHLT 71
              +  L     H+++ H     +     L GGK+ R  L      +L            
Sbjct: 23  ERFESFLKNHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTE 82

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 83  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 142

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+    L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 143 SNA--LLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 200

Query: 190 CFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +     E  + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 201 SASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 247


>gi|315173304|gb|EFU17321.1| geranyltranstransferase [Enterococcus faecalis TX1346]
          Length = 293

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|291612793|ref|YP_003522950.1| trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1]
 gi|291582905|gb|ADE10563.1| Trans-hexaprenyltranstransferase [Sideroxydans lithotrophicus ES-1]
          Length = 320

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 16/225 (7%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLT 71
           L  LL    + +      RL S +        Y +  GGK++R  LV   A  F      
Sbjct: 4   LKRLLASDMAAVDAVIRARLHSEVALVNQVGEYIINSGGKRLRPALVLLSAQAFGYGGKH 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
              + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++
Sbjct: 64  HHDLAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDFLYSRSFQMM 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
                     +R    L+   N+  +G +  Q+L+  D  +D      +   KT  L   
Sbjct: 122 VDVG-----EMRVMQTLADATNVIAEGEVL-QLLNCHDASVDIPNYMRVIHCKTAKLFEA 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A   GAI+  AS  ++E    +G +LG  FQL DD+LD   D  +
Sbjct: 176 AMRLGAILGKASTADEEAAAKYGMHLGTAFQLIDDVLDYSADEAQ 220


>gi|222871917|gb|EEF09048.1| predicted protein [Populus trichocarpa]
          Length = 254

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 7/212 (3%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           +       L  A+RYA+L GGK++R  LV   A   +     A+R G A+E IH YSL+H
Sbjct: 6   VGVDAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVDGLQPAAVRAGCAVELIHAYSLVH 65

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQL 146
           DD+P MDN  +RRGKPTVH+Q+ E +A++AG+ L   AFE++         + D ++++L
Sbjct: 66  DDMPCMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFELLVPEPDQTGSMPDALQARL 125

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM-AHAS 203
              L    G QGM GGQ +D+      + E Q+  + ++KTGAL+  +   GA       
Sbjct: 126 CRLLGRAAGAQGMAGGQAIDLASVGLQLSEAQLREMHRLKTGALLHASVLMGAACKEGVD 185

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
               + L  +G+ LG+ FQ+ DD+LD   D  
Sbjct: 186 AQAWQALSDYGQALGVAFQVVDDILDVVADSA 217


>gi|209693963|ref|YP_002261891.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238]
 gi|208007914|emb|CAQ78045.1| octaprenyl-diphosphate synthase [Aliivibrio salmonicida LFI1238]
          Length = 323

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T +F++++S  +     I+   ++S + N+  +G +  Q+++  
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSESVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+ +ASQ  +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNNASQEIETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|222109984|ref|YP_002552248.1| polyprenyl synthetase [Acidovorax ebreus TPSY]
 gi|221729428|gb|ACM32248.1| Polyprenyl synthetase [Acidovorax ebreus TPSY]
          Length = 327

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 104/232 (44%), Gaps = 17/232 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
                + + ++ + +D ++   L              +    RY +  GGK++R  L+  
Sbjct: 8   TAATLALIADDMQEVDKVIASRLQSAV--------PLVGEVARYIISAGGKRLRPALLLL 59

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +            + A +E IH  +L+HDD+  +D   +RRG+PT +  +    +++ G
Sbjct: 60  MSGALGYTGSQRFNLAAVVEFIHTATLLHDDV--VDESTLRRGRPTANENFGNPASVLVG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L T AF+++    +     +R   +L+   N+  +G +  Q+++  D  + E+    +
Sbjct: 118 DFLYTRAFQMMVETSS-----LRVMEILAEATNVIAEGEV-QQLMNTHDASLSESGYLNV 171

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + KT  L   +    A++A +    +     +G+ LG  FQ+ DD+LD + 
Sbjct: 172 IRSKTAKLFEASARLAAVLAASPPEIEHACASYGQALGTAFQVIDDVLDYDG 223


>gi|323700415|ref|ZP_08112327.1| Polyprenyl synthetase [Desulfovibrio sp. ND132]
 gi|323460347|gb|EGB16212.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
          Length = 297

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/225 (36%), Positives = 125/225 (55%), Gaps = 12/225 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
               L   +  ++  L   L             RLL+++ Y+LL GGK++R  LV     
Sbjct: 3   FKEDLGRRAALVEAYLVGCLRDRNI------PARLLASMEYSLLAGGKRLRPVLVLAWNG 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   A+   A++ECIH YSLIHDDLP+MD+  +RRG+P+ H Q+DE TAI+AG+GL
Sbjct: 57  LLGGDADKAMPFAASMECIHTYSLIHDDLPAMDDDDLRRGRPSNHKQFDEATAILAGDGL 116

Query: 124 LTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVF 178
           LT AF +++       L      + +  L    G  GM+GGQ +D++      +   ++ 
Sbjct: 117 LTEAFVLMTETCLVKGLPAERVLRAIAVLARAAGSGGMVGGQAVDMELTGRTGVPLDELK 176

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +  MKTGAL+  ACE GAI+A A++++ +  R FG  +G+ FQ+
Sbjct: 177 KMHAMKTGALLTAACECGAILAGAAESDVDNARRFGRKIGVAFQI 221


>gi|121998628|ref|YP_001003415.1| trans-hexaprenyltranstransferase [Halorhodospira halophila SL1]
 gi|121590033|gb|ABM62613.1| Trans-hexaprenyltranstransferase [Halorhodospira halophila SL1]
          Length = 323

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 16/234 (6%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   +     ++   ++ ++++ L      +       + S       GGK++R  +V 
Sbjct: 1   MNLDAIRELAADDMAEVNRLIEERLSSDVVLINQLAYHIVHS-------GGKRLRPMVVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A          +++ A IE IH  +L+HDD+  +D   +RRGK T H  +    +++ 
Sbjct: 54  LAARACGYQGKDHVQLAAIIEFIHTATLLHDDV--VDGSDMRRGKQTAHTIWGNEASVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L T AFE++        D++    +L+   N   +G +  Q++++ +  + E     
Sbjct: 112 GDFLYTRAFEMMVEL-----DSMAVLRILARATNTIARGEVM-QLMNVHEPDLTEADYRQ 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   KT  L    C++GA++A       E L  +G +LG  +QL DD LD   D
Sbjct: 166 VIYRKTATLFEAGCQNGAVLAGLDDAGCEALAAYGRHLGTAYQLVDDALDYSGD 219


>gi|88704338|ref|ZP_01102052.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71]
 gi|88701389|gb|EAQ98494.1| Octaprenyl-diphosphate synthase [Congregibacter litoralis KT71]
          Length = 320

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 10/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           +QE    +   LD +       +++   + + +  +Y +  GGK++R  LV   ++    
Sbjct: 1   MQEVRAVVSKELDAVNAVIIEQLRSDV-EMVENVGQYIVDAGGKRLRPVLVLLSSAALGS 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +R  A +E IH  +L+HDD+  +D   +RRG+PT +  +   ++++ G+ L T A
Sbjct: 60  ISELQIRFAAVVEFIHTATLLHDDV--VDVSELRRGRPTANSAFGNASSVLVGDFLYTRA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+++ +             M++ T N    G +  Q++   D    E Q + +   KT A
Sbjct: 118 FQLMVTLGNHD-----VLKMMADTTNTIAAGEVL-QLIRAGDSSTSEDQYYDVIDRKTAA 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L    C+  A++A A       L  +G N+GI FQ+ DDLLD + D
Sbjct: 172 LFAAGCQGAALLAGADSGNVRDLNIYGRNVGIAFQIVDDLLDYQGD 217


>gi|193070326|ref|ZP_03051269.1| octaprenyl-diphosphate synthase [Escherichia coli E110019]
 gi|192956385|gb|EDV86845.1| octaprenyl-diphosphate synthase [Escherichia coli E110019]
          Length = 323

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  EGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+   +  E++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILVGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219


>gi|146278504|ref|YP_001168663.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556745|gb|ABP71358.1| Polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 333

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 14/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + L  +   ++ ++ + +    +    +    L+ A      GGK++R  L    A L
Sbjct: 14  LAAWLAGDMAAVNGLIRERMASKHAPRIPEVTAHLVEA------GGKRLRPLLTLAAARL 67

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + + A +E IH  +L+HDD+  +D  + RRGKPT ++ +D  ++++ G+ L 
Sbjct: 68  CGYEGPYHIHLAATVEFIHTATLLHDDV--VDESHRRRGKPTANLLWDNKSSVLVGDYLF 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +F+++    +     +R   +L+       +G +  Q+   QD    E     + + K
Sbjct: 126 ARSFQLMVETGS-----LRVMDILANASATISEGEVL-QLTAAQDLRTTEDIYLQVVRGK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL   A E G ++A   + +   L  +G+ LGI FQ+ DDLLD   
Sbjct: 180 TAALFAAATEVGGVVAGVPEAQVAALHAYGDALGIAFQIVDDLLDYGG 227


>gi|270265042|ref|ZP_06193305.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13]
 gi|270040976|gb|EFA14077.1| hypothetical protein SOD_k00780 [Serratia odorifera 4Rx13]
          Length = 310

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 30  GGKRIRPMIAVLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 88  AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNVN 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI++ AS+ E++ L+ +G  LG  FQL DDLL
Sbjct: 142 DPDITEESYMRVIYSKTARLFEAAAQSSAILSEASEAEEKALQDYGRYLGTAFQLIDDLL 201

Query: 229 DCEED 233
           D   D
Sbjct: 202 DYSAD 206


>gi|159045835|ref|YP_001534629.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12]
 gi|157913595|gb|ABV95028.1| geranyltranstransferase [Dinoroseobacter shibae DFL 12]
          Length = 291

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 92/238 (38%), Positives = 133/238 (55%), Gaps = 14/238 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            G  +   + + RI   LDDL+         Q    +   + YA  GGK++R  LV E A
Sbjct: 2   SGFAAAQADGATRIAACLDDLI-------GAQPESVIRDGMAYATRGGKRLRGVLVLETA 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L  V    A+   AAIEC+H YSL+HDDLP+MD+  +RRG+PTVH+++DE +AI+ G+ 
Sbjct: 55  WLHGVAPERAVYAAAAIECLHAYSLVHDDLPAMDDDDLRRGQPTVHVKWDEASAILVGDA 114

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           L T AFE +S P+      +   L+ SL    G  GM+ GQ LDI  E     +   ++ 
Sbjct: 115 LQTLAFEALSDPRMTDDPAVALALVRSLAQASGAAGMVLGQALDIAAETAAAPLSLDEIT 174

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +Q  KTGAL+ ++ E+GA++A A       LR + E +G+ FQ+ADD+LD   D  K
Sbjct: 175 RLQAGKTGALIRWSAEAGALLARADP---APLRRYAEAIGLAFQIADDILDVTGDAEK 229


>gi|212213122|ref|YP_002304058.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
 gi|212011532|gb|ACJ18913.1| farnesyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
          Length = 332

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 20/234 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
             L   +Q + + +D ++   + + +SH+       L+  I + ++  GGK++R  +V  
Sbjct: 13  ESLRQLVQNDIEAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63

Query: 61  CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A             +   IE IH  +L+HDD+  +D    RRG+ T +  +    +++ 
Sbjct: 64  TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + AF+I++      + N+    +L+ T N   +G +  Q+++  D  IDE   + 
Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ DDLLD  +D
Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKD 229


>gi|154706037|ref|YP_001425022.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway
           5J108-111]
 gi|154355323|gb|ABS76785.1| farnesyl pyrophosphate synthetase [Coxiella burnetii Dugway
           5J108-111]
          Length = 332

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 116/234 (49%), Gaps = 20/234 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTE 60
             L   +Q +   +D ++   + + +SH+       L+  I + ++  GGK++R  +V  
Sbjct: 13  ESLRQPVQNDIAAVDALI---VKELSSHVP------LIETITHHIIQSGGKRLRPLVVLL 63

Query: 61  CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A             +   IE IH  +L+HDD+  +D    RRG+ T +  +    +++ 
Sbjct: 64  TARACGYEQDVEHQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLV 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + AF+I++      + N+    +L+ T N   +G +  Q+++  D  IDE   + 
Sbjct: 122 GDFLYSRAFQILAR-----RSNVPIMKILATTTNQISEGEVW-QLMNQNDPDIDEVTYYE 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT  L   A E GAI+A  ++  ++ +  FG +LG+ +Q+ DDLLD  +D
Sbjct: 176 VIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGLHLGMAYQIIDDLLDYSKD 229


>gi|320108147|ref|YP_004183737.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
 gi|319926668|gb|ADV83743.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
          Length = 309

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 84/244 (34%), Positives = 127/244 (52%), Gaps = 21/244 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+  +   D  L+ LL  +           +  ++RY++  GGK++R  L  E   +   
Sbjct: 12  LKSGAAATDAALERLLPGSEIA-----PHSIHRSMRYSVFAGGKRLRPILCMEAGRMVAG 66

Query: 68  NHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                +  +G+A+E +H YSLIHDDLPS D+  +RRGKPT HI + E  AI+ G+ L T+
Sbjct: 67  KLPAGIADLGSALEMLHTYSLIHDDLPSFDDDDLRRGKPTSHIVFGEAIAILTGDALQTF 126

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGL---------QGMLGGQMLDIQDEFI--DET 175
           A+E +S      +  ++    +++    G+          GM+GGQ+LDI+ E       
Sbjct: 127 AYETLSRLSCPAEATVQIIREIAIATGTGVGPTDGTGLPYGMIGGQVLDIEGEGTKPTAE 186

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---E 232
           QV  I + KTGAL+  +  +G I A AS    E LR FG+  G+ FQ+ DD+LD     E
Sbjct: 187 QVDRIHRAKTGALITTSIVTGGIFAGASAETVEHLRLFGQRAGLAFQIVDDVLDMTQSSE 246

Query: 233 DLPK 236
           DL K
Sbjct: 247 DLGK 250


>gi|91776484|ref|YP_546240.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT]
 gi|91710471|gb|ABE50399.1| farnesyl-diphosphate synthase [Methylobacillus flagellatus KT]
          Length = 296

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 9/236 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
              S  +   +R++  LD+LL  +          RL  A+RYA+LGG K++R+ L     
Sbjct: 3   DFQSWARHTQQRMEHTLDNLLPASYIA-----PTRLHEAMRYAVLGGGKRVRALLAHAAG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L            AA+E IH YSL+HDD+P MD+  +RRGKP+ H QYD+ TA++ G+ 
Sbjct: 58  ELCGAAPEKVDIAAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
           L T AF+ +++P        + +++  L    G +GM GGQ   LD   + ++++++  +
Sbjct: 118 LQTLAFQSLATPGLCTDPGRQLEMVSLLAIASGSRGMAGGQAIDLDSVGKALEQSELEYM 177

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KTGAL+  A   GA  A    Q     +  + + +G+ FQ+ DD+LD E D  
Sbjct: 178 HIHKTGALIRAAALLGAHCANDLDQERLHAIDHYAQAIGLAFQVVDDILDAEADSE 233


>gi|327541916|gb|EGF28424.1| Polyprenyl synthetase [Rhodopirellula baltica WH47]
          Length = 315

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 83/250 (33%), Positives = 121/250 (48%), Gaps = 21/250 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           N  L   +      ++  L     + A   +    +RL +A+RYA L  GK++R  L   
Sbjct: 15  NESLKDYMDARRPAVEVAL-----EAACEDRPGVPERLAAAVRYAVLAPGKRLRPMLTIM 69

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A     +  +A+    A+E IH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+AG
Sbjct: 70  AAEACGGDAESAMPSAVAVEMIHAYSLIHDDLPAMDDDDLRRGRPTTHIEFDEATAILAG 129

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176
           + L + AF  +    +    +  + L+ +L    G  G++GGQ  D+  E          
Sbjct: 130 DALQSMAFAHLHHSTSDATKS--AALIGTLATAAGPAGLVGGQADDLDAEKYTVEDFGGA 187

Query: 177 ------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                 +  I   KTGAL       GAI A A  N    L  + +  G+ FQ+ DDLLDC
Sbjct: 188 DAALKHLEAIHHRKTGALFTACAAMGAISAGADTNAVSALTDYAKAFGLAFQITDDLLDC 247

Query: 231 E---EDLPKK 237
               E L K+
Sbjct: 248 TSTDEQLGKR 257


>gi|229543999|ref|ZP_04433058.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans
           36D1]
 gi|229325138|gb|EEN90814.1| heptaprenyl diphosphate synthase component II [Bacillus coagulans
           36D1]
          Length = 320

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S L+ + + I+  L + +   A+ +Q Q ++ LL A      GGK+IR   V   A  
Sbjct: 6   LYSFLKTDIELIEQELANAVASNAALIQ-QASESLLKA------GGKRIRPVFVLLGAKF 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +        V  A+E IH  SL+HDD+  +D+  +RRGKPTV  ++D   A+  G+ +L
Sbjct: 59  GDYEIERVKNVAVALELIHMASLVHDDV--IDDAELRRGKPTVKAKWDNRIAMYTGDYIL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A E I+       +++ +  +L+ T      G +  Q+ D      +        K K
Sbjct: 117 ATALEYITK-----VEDLSAHQILADTLVEVCVGEIE-QIKDKYRFHQNLRCYLRRIKRK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L+  +C+ GAI + A +N   +L  FG N+G+ +Q+ DD+LD   
Sbjct: 171 TALLIAASCQLGAIASGADENIHRQLYRFGYNVGMSYQIIDDILDFTG 218


>gi|223043259|ref|ZP_03613306.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit
           2) (spore germination protein c3) [Staphylococcus
           capitis SK14]
 gi|314933652|ref|ZP_07841017.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           caprae C87]
 gi|222443470|gb|EEE49568.1| heptaprenyl diphosphate synthase component 2 (hepppsynthase subunit
           2) (spore germination protein c3) [Staphylococcus
           capitis SK14]
 gi|313653802|gb|EFS17559.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           caprae C87]
          Length = 319

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71
           K+++  L+  +  T   ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEERLERAIQSTDQTLEEASFHLLSS-------GGKRVRPVFVILSSQFGTSEGTSED 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             RV  A+E IH  +L+HDD+  +D    RRG+PT+  ++D+ TAI+ GN LL    + +
Sbjct: 64  TYRVAVALELIHMATLVHDDV--IDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGAL 188
           S  K     + R   ++S +    +  +  G++   QD+F  E   T        KT  L
Sbjct: 122 SEIK-----DARVHSIISNS----IVDVCRGELFQFQDQFNSEQNITNYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  A E GAI + AS+    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLATEVGAITSGASKETIRKLKLIGHYIGMSFQIIDDVLDFTSSEKK 220


>gi|254521204|ref|ZP_05133259.1| geranyltranstransferase [Stenotrophomonas sp. SKA14]
 gi|219718795|gb|EED37320.1| geranyltranstransferase [Stenotrophomonas sp. SKA14]
          Length = 292

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 83/230 (36%), Positives = 120/230 (52%), Gaps = 10/230 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASL 64
            +       RI++ LD  L   A     +   RL  A+RY++LGG K++R  LV     L
Sbjct: 4   ETLFARWRDRIESELDAALPSPA-----EAPQRLHQAMRYSVLGGGKRMRPLLVYASGHL 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F            A+E IH YSL+HDDLP+MD+  +RRGKPT HI +DE TAI+AG+ L 
Sbjct: 59  FGAQLEHLDAAAMAVELIHAYSLVHDDLPAMDDDDLRRGKPTTHIAFDEATAILAGDALQ 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQK 182
             AF +++     L   +R   + +L H  G  GM GGQ   +D   +      +  +  
Sbjct: 119 ARAFGLLADA--PLPATLRVACLQTLAHASGAAGMCGGQALDIDATGQQQTLAALTRMHA 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTGAL+  A   GA+   A + +  +L  F + LG+ FQ+ DD+LD E 
Sbjct: 177 LKTGALIRAAVRMGALCGQAHEPQLAQLDSFADALGLAFQVRDDILDVEA 226


>gi|332662624|ref|YP_004445412.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331438|gb|AEE48539.1| Geranyltranstransferase [Haliscomenobacter hydrossis DSM 1100]
          Length = 323

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 11/224 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ID            +        L + + Y + LGGK++R  L      LF  ++  AL 
Sbjct: 2   IDAYFQTFEDYRQQNSFDGQPTALYAPVNYIMELGGKRLRPILALMGYELFKADYRPALP 61

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +  AIE  H +SL+HDD+  MD   +RRG+ TVH +++   AI++G+ +L YA++ +   
Sbjct: 62  LAYAIEIFHNFSLVHDDV--MDAAPLRRGQATVHTKWNLNAAILSGDVMLIYAYDYLLRL 119

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCF 191
               +     ++   +   +       GQ LDI  E   +    +   + ++KT  L+  
Sbjct: 120 DAPNRIAEIVKVFNRVAREV-----CEGQQLDIDFETRSDVSIPEYLRMIELKTSVLIAG 174

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A E   + A AS ++ + L  FG N+GI FQL DD+LD   D  
Sbjct: 175 ALEMAGLAAGASMDDVQHLYEFGRNVGIAFQLQDDILDTFGDAA 218


>gi|251791050|ref|YP_003005771.1| octaprenyl diphosphate synthase [Dickeya zeae Ech1591]
 gi|247539671|gb|ACT08292.1| Trans-hexaprenyltranstransferase [Dickeya zeae Ech1591]
          Length = 323

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALSYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLAS-----LRVMSVMSDAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI++ AS  ++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEDSYMRVIYSKTARLFEAAAQASAILSDASSEQELALQEYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|241912483|gb|ACS71955.1| putative geranylgeranyl pyrophosphate synthase [Azospirillum
           brasilense]
          Length = 338

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 21/238 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL------------LGGKKIRSFLV 58
           E  +R  T LDDL    A  + +  N+ ++  +  ++             GGK++R  L 
Sbjct: 8   EPKRRKSTPLDDLTALVADDL-SAVNEIIVQRMHSSVDMIPQLAGYLIAAGGKRLRPVLT 66

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A L          + A +E IH  +L+HDD+  +D   +RRG  + +  +    +++
Sbjct: 67  LAAAELCGYKGEDHKMLAAVVEFIHTATLLHDDV--VDESDLRRGLASANAVFGNKASVL 124

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ L + +FE++    +     +    +LS    +  +G +  Q+    D    E    
Sbjct: 125 VGDFLFSRSFELMVEVGS-----LDVLRILSKASAVIAEGEVL-QLRTTNDTETSEQAYL 178

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + K KT  L   AC  GA++A   Q E+  L  +G NLGI FQL DD+LD      K
Sbjct: 179 EVIKAKTAELFAAACRVGAVVAARPQAEELALYDYGMNLGIAFQLVDDVLDYSAKQAK 236


>gi|237809244|ref|YP_002893684.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187]
 gi|237501505|gb|ACQ94098.1| Polyprenyl synthetase [Tolumonas auensis DSM 9187]
          Length = 296

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 6/232 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           LQ  S+     +DDLLLQ    +      RL +A+R+ L LGGK++R FLV    S+ ++
Sbjct: 3   LQTFSQHYRQRIDDLLLQKIETLPDLSP-RLKAAMRHGLVLGGKRVRPFLVYATGSMLDI 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AAIECIH YSLIHDDLP+MD+  +RRG PTVH  +DE TA++AG+ L T A
Sbjct: 62  DEALLDGPAAAIECIHAYSLIHDDLPAMDDDDLRRGHPTVHKAFDEATAVLAGDALQTLA 121

Query: 128 FEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMK 184
           F I++  P        + +++ +L    G  GM GGQ LD+  E   +    + +I + K
Sbjct: 122 FSILADHPFPDALRTQQVKMLSTLAQASGYAGMCGGQALDLAAEGQHVGLEALELIHRHK 181

Query: 185 TGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           TGAL+  A   GA+     +      L+ +   +G+ FQ+ DD+LD   D  
Sbjct: 182 TGALIECAVMLGALCQQDVAAETVSALKKYAAAIGLAFQVQDDILDVVSDTE 233


>gi|78189407|ref|YP_379745.1| isoprenyl synthetase [Chlorobium chlorochromatii CaD3]
 gi|78171606|gb|ABB28702.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Chlorobium chlorochromatii CaD3]
          Length = 331

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 31  MQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              Q    L +  RY L G GK+IR FL          +   AL V  A+E +H ++LIH
Sbjct: 28  FSKQTPQTLYAPARYILEGKGKRIRPFLTLLACEAICGSPDDALDVALAVEILHNFTLIH 87

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  MD   +R G+PTVH  ++   AI+ G+ ++ YA+E+    K         Q  L 
Sbjct: 88  DDI--MDQAELRHGRPTVHKTWNVSAAILTGDMMIAYAYELALQSKGSR------QTELV 139

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNE 206
              N     +  GQ LD++ E + +        +   KTG L+  A E+G +  +A+  +
Sbjct: 140 HILNDANITICEGQALDMELEEMPDASMSDYLDMIAKKTGRLISAALEAGGVAGNATDEQ 199

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              L  FGE +G  FQ+ DD LD   +  K
Sbjct: 200 LRSLVLFGEKIGQAFQIQDDYLDIMAEAGK 229


>gi|145588381|ref|YP_001154978.1| farnesyltranstransferase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046787|gb|ABP33414.1| Farnesyltranstransferase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 334

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 10/187 (5%)

Query: 48  LGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            GGK++R  L+   A            L + A +E IH  +L+HDD+  +D   +RRG+ 
Sbjct: 49  AGGKRVRPALLMLVAKALANGKESAHTLEMAAVVEFIHTATLLHDDV--VDESTLRRGRE 106

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T +  +    +++ G+ L + AF+++ +P     +++R   +LS   N   +G +  Q+L
Sbjct: 107 TANAAFGNAASVLVGDFLYSRAFQMMVAP-----NDLRVMQILSDATNTIAEGEVL-QLL 160

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           ++ D  +DE     + + KT  L   + E GAI+A A+ +++E+   FG ++G  FQL D
Sbjct: 161 NMNDPEVDEASYLQVIRYKTAKLFEASTELGAILASATDSQREQAAAFGRHIGTAFQLMD 220

Query: 226 DLLDCEE 232
           DLLD   
Sbjct: 221 DLLDYTA 227


>gi|27262424|gb|AAN87493.1| Farnesyl pyrophosphate synthetase [Heliobacillus mobilis]
 gi|111075007|gb|ABH04860.1| polyprenyl diphosphate synthase [Heliobacillus mobilis]
 gi|155241755|gb|ABT18037.1| heptaprenyl diphosphate synthase [Heliobacillus mobilis]
          Length = 320

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 15/235 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L   +Q +  +++  L      +   +    +  L +       GGK++R   V  
Sbjct: 1   MQSRLFQDIQNDLAKVEAELAKYADTSLPTLTAASSHLLHA-------GGKRLRPAFVLL 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                N +    L +  A+E IH  SL+HDD+  +D    RRG PTV  ++    +I  G
Sbjct: 54  AGRFHNYSLERLLPLAVAMEMIHMASLVHDDV--VDESKTRRGIPTVKARWGNRISIHTG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   +  +I+         + +++ + +            QM    D           
Sbjct: 112 DHLFARSLLLIAELNDDKISEVLAKVSVEMCKGEI------QQMSGTFDVNQTFRDYLFH 165

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            K KT  L+  +C+ GA+   A  +    L+ +G +LG+ FQ+ DD+LD   D  
Sbjct: 166 IKRKTALLISASCQLGAMAVKADPSIVRALKMYGHHLGMAFQVTDDILDLTADEA 220


>gi|146329727|ref|YP_001209836.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A]
 gi|146233197|gb|ABQ14175.1| polyprenyl synthase [Dichelobacter nodosus VCS1703A]
          Length = 348

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 12/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSA---IRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
           I  ++ + + QT   MQ +    +  A   +RYAL   GK+ R  L    A + +     
Sbjct: 32  IQRLIANEMEQTERVMQREIYTEVALAQSVMRYALQAKGKRFRPMLHLLSAGVCDYRGDF 91

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A    A IE IH  +L+HDD+  +D+  IRRG+ + HI +    +I+ G+ L T AF+++
Sbjct: 92  APTAAAFIEFIHNATLLHDDV--VDSSDIRRGQASAHIIFSNAASILVGDFLYTRAFQLM 149

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
            S       N      ++   N+   G +  Q+ ++ +  IDET  + + ++KT  L   
Sbjct: 150 VSSG-----NAAVLKTMADATNLIAAGEVM-QLANMHNPDIDETCYYRVIELKTAVLFSA 203

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AC+  A +A  S+ +   L  +G+ LG+ FQ+ DD+LD   D  K
Sbjct: 204 ACKIAAQLAGVSEEKIAALADYGKKLGMAFQMIDDMLDYMGDESK 248


>gi|118576797|ref|YP_876540.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
           [Cenarchaeum symbiosum A]
 gi|118195318|gb|ABK78236.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
           [Cenarchaeum symbiosum A]
          Length = 321

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 3/199 (1%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
             RL +A  + +  GGK+ R +++ +           A+    AIE IH ++L+HDD+  
Sbjct: 21  PSRLYAAAAHLIEHGGKRFRPYMLIKSCQALGGKKSDAMPAATAIEMIHNFTLLHDDI-- 78

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MDN  IR G PTVH ++    AI+AG+ L + A+++IS P+   K   R    L+     
Sbjct: 79  MDNDSIRHGVPTVHKKFGVPVAILAGDVLFSKAYQVISGPRVPEKRAARLTSRLAAACVD 138

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
             +G L    +    +    ++  M+   KT +L   AC  GAI + A + +  R   FG
Sbjct: 139 VCEGQLYDMDMAEGAKLPTRSEYIMMIGKKTASLFGAACAMGAICSGADEKDARRFAAFG 198

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG+ FQ+ DDL+    D
Sbjct: 199 TGLGVAFQITDDLIGITGD 217


>gi|26987423|ref|NP_742848.1| polyprenyl synthetase [Pseudomonas putida KT2440]
 gi|24982082|gb|AAN66312.1|AE016259_10 octylprenyl diphosphate synthase [Pseudomonas putida KT2440]
          Length = 322

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEED 233
           LD + D
Sbjct: 214 LDYKGD 219


>gi|322434675|ref|YP_004216887.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 320

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 40/263 (15%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   L+  +   D  L+ LL              +  A+R++   GGK++R  L  E A
Sbjct: 6   DVKHLLKAGATLTDAALERLLP-----APDTLPHSIHRAMRHSTFAGGKRLRPILALEAA 60

Query: 63  SLFNVNHLTALRVGAAIE-----------CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            + +   LT      A+E            IH YSLIHDDLP++DN  +RRG+PT H+ +
Sbjct: 61  RMVSGGTLTP-----ALETAAAELGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVF 115

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-----------QGML 160
            E TAI+AG+ L T AF+ I++        +     +S     G+            GM+
Sbjct: 116 GEATAILAGDALQTLAFQTIANLHAPAATVVSILREVSAAVATGVGSVGDLHTSLPPGMI 175

Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQ-----NEKERLRCF 213
           GGQ++DI+ E +      V  I + KTGAL+  +  +G ++    Q     +   RLR F
Sbjct: 176 GGQVMDIESEGVKPTAELVEAIHRAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTF 235

Query: 214 GENLGIIFQLADDLLDCEEDLPK 236
           G+  G+ FQ+ DD+LD  +D  +
Sbjct: 236 GQKAGLAFQIVDDVLDMTQDSAQ 258


>gi|238650786|ref|YP_002916641.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic]
 gi|238624884|gb|ACR47590.1| octaprenyl-diphosphate synthase [Rickettsia peacockii str. Rustic]
          Length = 371

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 11/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I   L D + +  + + +  + ++ L+  + +Y L  GGK+IR  L    A +F+    
Sbjct: 50  KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 109

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L + +F++
Sbjct: 110 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 167

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           + +  +     I++  +L+    I  +G +   +   +   I   +   I K KT  L  
Sbjct: 168 MVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 222

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AC  GAI+A    +  + ++ FG+ LG IFQ+ DDLLD 
Sbjct: 223 TACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 262


>gi|15892647|ref|NP_360361.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7]
 gi|15619817|gb|AAL03262.1| octaprenyl-diphosphate synthase [Rickettsia conorii str. Malish 7]
          Length = 371

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/220 (27%), Positives = 115/220 (52%), Gaps = 11/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I   L D + +  + + +  + ++ L+  + +Y L  GGK+IR  L    A +F+    
Sbjct: 50  KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 109

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L + +F++
Sbjct: 110 NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 167

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           + +  +     I++  +L+    I   G +   +   +   I   +   I K KT  L  
Sbjct: 168 MVASGS-----IKAMNVLAKASAIISAGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 222

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AC  GAI+A    +  + ++ FG+ LG IFQ+ DDLLD 
Sbjct: 223 TACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 262


>gi|37678653|ref|NP_933262.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
 gi|37197393|dbj|BAC93233.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
          Length = 306

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 26  GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 83

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   NI  +G +  Q+++  
Sbjct: 84  AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNIIAEGEVL-QLMNCN 137

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A    +  L+ +G+ LG  FQL DD++
Sbjct: 138 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 197

Query: 229 DCEED 233
           D   D
Sbjct: 198 DYTSD 202


>gi|23014219|ref|ZP_00054047.1| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 339

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + ++++ ++++  + D +      +  Q    +++A      GGK++R  L    A
Sbjct: 19  DALVALVKDDLEKVNRAIVDRMHSPV-ELIPQLAGHIIAA------GGKRLRPVLTLASA 71

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L        +++ A +E IH  +L+HDD+  +D   +RRG+ + +  +    +++ G+ 
Sbjct: 72  KLAGHTGERHIKLAACVEFIHTATLLHDDV--VDESELRRGQASANALFGNKPSVLVGDF 129

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++    +     +    +LS   ++  +G +  Q++   D    E     + +
Sbjct: 130 LFSRSFELMVEDGS-----LSVLAILSHASSVIAEGEVL-QLITANDTETSEDSYLEVIR 183

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT AL   AC  GA++A   + E+E L  +G NLGI FQL DD+LD   
Sbjct: 184 SKTAALFAAACRIGAVVADRPKVEEEALESYGLNLGIAFQLIDDVLDYSA 233


>gi|34581601|ref|ZP_00143081.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246]
 gi|28262986|gb|EAA26490.1| octaprenyl-diphosphate synthase [Rickettsia sibirica 246]
          Length = 327

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/220 (27%), Positives = 116/220 (52%), Gaps = 11/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I   L D + +  + + +  + ++ L+  + +Y L  GGK+IR  L    A +F+    
Sbjct: 6   KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L + +F++
Sbjct: 66  NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 123

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           + +  +     I++  +L+    I  +G +   +   +   I   +   I K KT  L  
Sbjct: 124 MVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 178

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AC  GAI+A    +  + ++ FG+ LG IFQ+ DDLLD 
Sbjct: 179 TACAVGAIIAGQVDHISKDMQDFGKLLGTIFQVIDDLLDY 218


>gi|167031734|ref|YP_001666965.1| polyprenyl synthetase [Pseudomonas putida GB-1]
 gi|166858222|gb|ABY96629.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
          Length = 322

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDEQREALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEED 233
           LD + D
Sbjct: 214 LDYKGD 219


>gi|229552482|ref|ZP_04441207.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
 gi|258539852|ref|YP_003174351.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
 gi|229314219|gb|EEN80192.1| geranyltranstransferase [Lactobacillus rhamnosus LMS2-1]
 gi|257151528|emb|CAR90500.1| Geranyltranstransferase [Lactobacillus rhamnosus Lc 705]
          Length = 283

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 17/234 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L +    I+  LD+ L        T  N  L +A+ Y++  GGK++R  L+    ++++ 
Sbjct: 5   LTDWQTAINHALDEQLA-------TVANPHLRAAMAYSVDAGGKRLRPLLLLSIVAMYDG 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL    A+E +H YSLIHDDLP+MDN  +RRG+PT H Q+ E  AI+AG+ LLT A
Sbjct: 58  VVAEALPAATALEFVHTYSLIHDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           F I+S    +    +    +  L    G  GM+ GQ+LD+  E    D   +  + + KT
Sbjct: 118 FAILSQHYPEKGAAL----VQILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GAL+      G++     + ++  L  F    G+ FQ+ DD+ D      +L K
Sbjct: 174 GALIQAGVAMGSLFVAIPEADQVALADFAAAFGLGFQIKDDINDVTKTTAELGK 227


>gi|237809123|ref|YP_002893563.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187]
 gi|237501384|gb|ACQ93977.1| Trans-hexaprenyltranstransferase [Tolumonas auensis DSM 9187]
          Length = 323

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 10/205 (4%)

Query: 30  HMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           + + Q +  L++ + Y ++  GGK+IR  L    A          + +   IE IH  +L
Sbjct: 22  YQRLQSDVALVNQLAYYIISGGGKRIRPLLAVLSARAIGYQGDAHISLATIIEFIHTATL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRG+ T +  +    +++ G+ L T AF+++         N+R   +
Sbjct: 82  LHDDV--VDESVLRRGRDTANQLFGNAASVLVGDFLHTRAFQMMVELG-----NMRIMQL 134

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           LS   N+  +G +  Q+++  D    E     +   KT  L   A    AI+A+   + +
Sbjct: 135 LSEATNLIAEGEVM-QLMNCNDPSTTEDNYLQVIYCKTAKLFEAATHCAAILANQPAHIE 193

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
           + LR +G+ LG  FQL DD++D   
Sbjct: 194 QALRDYGKYLGTAFQLIDDVMDYSS 218


>gi|325913420|ref|ZP_08175786.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B]
 gi|325477189|gb|EGC80335.1| polyprenyl synthetase [Lactobacillus iners UPII 60-B]
          Length = 288

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 22/236 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
              RI++ L + L  T       ++ +    + Y+ L GGK++R  L      + +    
Sbjct: 10  YLPRINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    +
Sbjct: 64  EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
            I+            +L+  +T  IG  GM GGQ +DI          +ET +  ++ +K
Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           TG L+  + +  A  A++S   +  L  F E  G  +Q+ DD++D  +      KK
Sbjct: 178 TGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233


>gi|229586816|ref|YP_002845317.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5]
 gi|228021866|gb|ACP53574.1| Octaprenyl-diphosphate synthase [Rickettsia africae ESF-5]
          Length = 371

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 119/225 (52%), Gaps = 14/225 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLF 65
           ++Q++ K   T L++L++          ++ L+  + +Y L  GGK+IR  L    A +F
Sbjct: 50  EIQQDLKDEVTKLNNLIISCLK-----SDEELIEKVGKYLLEAGGKRIRPLLTIITAKMF 104

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L +
Sbjct: 105 DYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFS 162

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +F+++ +  +     I++  +L+    I  +G +   +   +   I   +   I K KT
Sbjct: 163 QSFKLMVASGS-----IKAMNVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKT 217

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             L   AC  GAI+A    +  + ++ FG+ LG IFQ+ DDLLD 
Sbjct: 218 AELFGTACAVGAIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 262


>gi|222480459|ref|YP_002566696.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453361|gb|ACM57626.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 348

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 36/253 (14%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL- 64
             ++E  + ++  +D+        +  QH +RL  A RY L  GGK++R  + T  A   
Sbjct: 12  EAIRERRELVNAAIDE-------ELPVQHPERLYEATRYILEAGGKRLRPTVTTLAAEAV 64

Query: 65  ---------------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                           + N +  +R   AIE I  ++LIHDD+  MD   +RRG P VH 
Sbjct: 65  TGTDPLSADFREFAALDGNTVDVMRAAVAIEVIQSFTLIHDDI--MDEDDLRRGVPAVHE 122

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           QYD  TAI+AG+ L + AFE ++   +   + + +  ML+ T       +  GQ LD+  
Sbjct: 123 QYDISTAILAGDTLYSKAFEFMTETGSDPANGLEAMRMLATT----CTEICEGQSLDVSF 178

Query: 170 EFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E  D+    +   + ++KT  L   +  + A++  A     + L  +G + G  FQ+ DD
Sbjct: 179 ESRDDILPEEYLEMVELKTAVLYGASAATPAVLLGADDEVVDALYQYGIDSGRAFQIQDD 238

Query: 227 LLDCE---EDLPK 236
           +LD     E+L K
Sbjct: 239 VLDLTVASEELGK 251


>gi|303247299|ref|ZP_07333573.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491458|gb|EFL51346.1| Polyprenyl synthetase [Desulfovibrio fructosovorans JJ]
          Length = 299

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 127/235 (54%), Gaps = 6/235 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +  +L   +  ++  + +     A   +    + LLSA+ Y+L+ GGK++R  L    A 
Sbjct: 3   VKERLAAQAAEVEVYIRERF--GARMRERGVPEGLLSAMEYSLMAGGKRLRPCLCLSFAE 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF     + +   A  E IH YSLIHDDLP+MD+  +RRG+P+ H  + E  AI+AG+ L
Sbjct: 61  LFGAPRASVMPFAAGFELIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAGAILAGDAL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMI 180
           LT AF  +S     +   +    +       G  GM+GGQMLD++    + +   ++  +
Sbjct: 121 LTEAFGCMSRSWPAVAAELVLPALAEAGRAAGAAGMVGGQMLDMEFTARQGVTLAELAHM 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q +KTGAL+  +C  GAI+A A+++   R R +GE +G  FQ+ DD+LD   D  
Sbjct: 181 QALKTGALITASCVCGAILAGAAEDGISRAREYGEAVGAAFQIVDDILDEVGDAA 235


>gi|197119777|ref|YP_002140204.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
 gi|197089137|gb|ACH40408.1| octaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
          Length = 322

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 10/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +      I   L ++ LQ    +Q+     +     Y L  GGK+IR  LV   A L   
Sbjct: 1   MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPGLVLLAARLCGY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   ++ + + +E IH  +L+HDD+  +DN  +RRG  + +  +    +++ G+ L + +
Sbjct: 60  DGNRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++ +       ++R   +L+    I  +G +  Q++   D  I   +   + + KT  
Sbjct: 118 FSLMVTDG-----DLRILKVLADATTIIAEGEVL-QLVCTSDLDITVERYIEVVRSKTAI 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  ACE GAI+  A    ++ L  +G +LGI FQL DD LD   
Sbjct: 172 LLSAACEVGAILGEADPVHRQALADYGMDLGIAFQLMDDTLDYTA 216


>gi|58337602|ref|YP_194187.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus
           acidophilus NCFM]
 gi|227904242|ref|ZP_04022047.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796]
 gi|58254919|gb|AAV43156.1| geranylgeranyl diphosphate (GGPP) synthase [Lactobacillus
           acidophilus NCFM]
 gi|227867890|gb|EEJ75311.1| geranyltranstransferase [Lactobacillus acidophilus ATCC 4796]
          Length = 289

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 17/222 (7%)

Query: 19  ILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRV 75
           ++D+ L   A H+ ++ +D ++   + Y+++ GGK++R  L     +        + +R+
Sbjct: 14  VIDNYL---AKHLASEIDDQKISQIMSYSVMAGGKRLRPLLFLATLNALGKKIEESEIRL 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGVQWIAEGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190
                   S+L++ +T  IG  GM+GGQ LDI          DE  +  ++ +KTG L+ 
Sbjct: 131 NS------SELVIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINKMEWLKTGCLIQ 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 185 ASVEMAAVYAKASDIEQVKLVDFAKTFGRSYQIYDDLVDVVE 226


>gi|15604342|ref|NP_220858.1| octaprenyl-diphosphate synthase (ispB) [Rickettsia prowazekii str.
           Madrid E]
 gi|3861034|emb|CAA14934.1| OCTAPRENYL-DIPHOSPHATE SYNTHASE (ispB) [Rickettsia prowazekii]
 gi|292572096|gb|ADE30011.1| Octaprenyl-diphosphate synthase [Rickettsia prowazekii Rp22]
          Length = 327

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 16/226 (7%)

Query: 8   KLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           K+Q+N K   T L+DL+   L++ + +  +    L+ A      GGK+IR  L    A +
Sbjct: 6   KIQQNLKDEVTQLNDLIISCLKSDAELIEKVGKYLVEA------GGKRIRPLLTIITAKM 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F+      +++ +A+E IH  +L+HDD+  +DN  +RR KPT ++ +   T+I+ G+ L 
Sbjct: 60  FDYKGNNHIKLASAVEFIHAATLLHDDV--VDNSTLRRFKPTANVIWGSKTSILVGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + +F+++ +        I++  +L+    I  +G +   +   +   I   +   I K K
Sbjct: 118 SQSFKLMVASGC-----IKAMNVLAKASVIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           T  L   ACE GAI+A       + ++ FG  LG IFQ+ DDLLD 
Sbjct: 173 TAELFGAACEVGAIIAEQVDRVSKDVQNFGRLLGTIFQVIDDLLDY 218


>gi|54307607|ref|YP_128627.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
           SS9]
 gi|46912030|emb|CAG18825.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
           SS9]
          Length = 323

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A          +   A +E IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLVVLAARALGYQGDKHITAAAFVEFIHTATLLHDDV--VDESDMRRGKDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+  +S   +  L+ +G  LG  FQL DD+L
Sbjct: 155 DPNTTEDNYMQVIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLIDDVL 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYVAD-GKE 222


>gi|148545964|ref|YP_001266066.1| polyprenyl synthetase [Pseudomonas putida F1]
 gi|148510022|gb|ABQ76882.1| Polyprenyl synthetase [Pseudomonas putida F1]
          Length = 322

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAQATDEQREALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEED 233
           LD + D
Sbjct: 214 LDYKGD 219


>gi|238756420|ref|ZP_04617729.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473]
 gi|238705350|gb|EEP97758.1| Octaprenyl-diphosphate synthase [Yersinia ruckeri ATCC 29473]
          Length = 323

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      +++ A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALDYQGNKHIKIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTSLES-----LRVLQLMSEATNVIAEGEVM-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S +I+A AS  ++   + +G  LG  FQL DDLL
Sbjct: 155 NPDITEDSYMRVIYSKTARLFEAASQSSSILADASPEQEMAFQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|76818772|ref|YP_335377.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
 gi|126458601|ref|YP_001075667.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
 gi|167725531|ref|ZP_02408767.1| polyprenyl synthetase [Burkholderia pseudomallei DM98]
 gi|167828246|ref|ZP_02459717.1| polyprenyl synthetase [Burkholderia pseudomallei 9]
 gi|167849704|ref|ZP_02475212.1| polyprenyl synthetase [Burkholderia pseudomallei B7210]
 gi|242313506|ref|ZP_04812523.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
 gi|254264895|ref|ZP_04955760.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
 gi|76583245|gb|ABA52719.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
 gi|126232369|gb|ABN95782.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
 gi|242136745|gb|EES23148.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
 gi|254215897|gb|EET05282.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
          Length = 322

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
           +   ++ +  LD +L      +       L +A+RYA+ GG K++R  L      L + +
Sbjct: 34  KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 88

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V A IE IH +SLI DDLP+MDN  +R G+ T+H QYD  TA++A +GL++ AF
Sbjct: 89  REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 148

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186
             +S     L  ++R  LM  L  +IG  G+ GGQ +D+      +D T++  + +MKTG
Sbjct: 149 LALSEAPLPL--DVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTG 206

Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLDCEE 232
           AL+  A   G +       E       +  +GE LG+ +Q+ DD+LD   
Sbjct: 207 ALIRAAVRMGVLCGTVPGAELGAAWRAVSEYGERLGLAYQVVDDILDSTA 256


>gi|326793607|ref|YP_004311427.1| trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1]
 gi|326544371|gb|ADZ89591.1| Trans-hexaprenyltranstransferase [Marinomonas mediterranea MMB-1]
          Length = 329

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 22/236 (9%)

Query: 15  RIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNH- 69
           +I  ++ D   Q   ++ +Q      L+  I Y ++  GGK++R  +V   A        
Sbjct: 5   KIHDVVADEFSQVNDYILSQLKSEIPLIEQIGYYIISNGGKRMRPLMVLLAARAAQPAQG 64

Query: 70  ------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    +++ + IE IH  +L+HDD+  +D   +RRGK T + ++    +++ G+ L
Sbjct: 65  LSETQLSHTVKMASIIEFIHTATLLHDDV--VDESDMRRGKKTANEEWGNAPSVLVGDFL 122

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+I+ +  +     +    +LS T NI  +G +  Q+++  D    E     + + 
Sbjct: 123 YSRAFQIMVNVGS-----VPCMEILSNTTNIISEGEV-QQLINCGDPDTSEESYLKVIQY 176

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           KT  L   A   GA++A AS+  ++ L+ +G  +G  FQL DD++D     E++ K
Sbjct: 177 KTAKLFEGAALCGAVVAGASEEHQKALQAYGMYVGTAFQLVDDVMDYVSTAEEMGK 232


>gi|261493062|ref|ZP_05989602.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496350|ref|ZP_05992745.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261307994|gb|EEY09302.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311282|gb|EEY12445.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 335

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLL---SAIRYALLGG-KKIRSFLVTECASLFNV 67
           + ++I  + ++ +    + +  Q N  +L       Y + GG K+IR  +    A     
Sbjct: 10  SLEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYIIAGGGKRIRPLIAVLAARALGY 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +   A IE +H  +L+HDD+  +D   +RRG+PT +  +    +++ G+ + T +
Sbjct: 70  RGKKHITAAAFIEFVHTATLLHDDV--VDESDMRRGRPTANAHFGNAASVLVGDFIYTRS 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++       D++R   ++S   N   +G +  Q++++ D    E     +   KT  
Sbjct: 128 FQMMTDL-----DSLRVLKVMSAATNALAEGEV-QQLMNVNDPNTTEANYMRVIYNKTAR 181

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A +  AI+A AS+  +  L+ +G  LG  FQL DD+LD   
Sbjct: 182 LFEAATQCVAIVADASEEIETALKNYGCYLGTAFQLIDDILDYSA 226


>gi|329113331|ref|ZP_08242112.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001]
 gi|326697156|gb|EGE48816.1| Octaprenyl-diphosphate synthase [Acetobacter pomorum DM001]
          Length = 356

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDN 97
           A      GGK++R  L    A +   N+       + + A +E IH  +L+HDD+  +D+
Sbjct: 64  AAHLVAAGGKRLRPLLTLAAARMCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDD 121

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  + +  +    +++ G+ L   +F+I+++       ++    +LS       +
Sbjct: 122 SQLRRGLASANAIFGNKASVLVGDFLFARSFQILTA-----DASLGVMAILSAASATLAE 176

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           G +  QM    D      Q   +   KT AL   ACESGA++  A+  ++E LR +G NL
Sbjct: 177 GEVM-QMTTQNDLSTSVDQYLQVIYGKTAALFAAACESGAVIGEATPEQREALRMYGANL 235

Query: 218 GIIFQLADDLLDCEED---LPKK 237
           G+ FQL DD LD   D   L K+
Sbjct: 236 GMAFQLVDDALDYAADQATLGKE 258


>gi|206578772|ref|YP_002236401.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342]
 gi|288933385|ref|YP_003437444.1| dimethylallyltranstransferase [Klebsiella variicola At-22]
 gi|290511564|ref|ZP_06550933.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55]
 gi|206567830|gb|ACI09606.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae 342]
 gi|288888114|gb|ADC56432.1| Dimethylallyltranstransferase [Klebsiella variicola At-22]
 gi|289776557|gb|EFD84556.1| octaprenyl diphosphate synthase [Klebsiella sp. 1_1_55]
          Length = 323

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++   +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTQLGS-----LKILEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   ++A  S  E+  L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAASQCAGMLADCSAEEERALQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSSD 219


>gi|242240764|ref|YP_002988945.1| octaprenyl diphosphate synthase [Dickeya dadantii Ech703]
 gi|242132821|gb|ACS87123.1| Trans-hexaprenyltranstransferase [Dickeya dadantii Ech703]
          Length = 323

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALNYQGNKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLSS-----LRVLAVMSDAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI+A A    +  LR +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILADADTTCENALRDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYNAD 219


>gi|329997657|ref|ZP_08302894.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3]
 gi|328538933|gb|EGF64988.1| octaprenyl pyrophosphate synthetase [Klebsiella sp. MS 92-3]
          Length = 323

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++   +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTQLGS-----LKILEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   ++A  +  E+  L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAASQCAGLLADCTAEEERALQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSSD 219


>gi|294664721|ref|ZP_06730051.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292605499|gb|EFF48820.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 291

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M+  L  +    ++R         L+      T    RL +A+R+A+LGG K++R  LV 
Sbjct: 1   MSSALFDRWIARTER--------SLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LF            A+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+A
Sbjct: 53  ASGALFGAAEDQLDTPAVAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILA 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L T AFE++++     +  +     L+               +D   +      +  
Sbjct: 113 GDALQTRAFELLATAPASAELRVGWMQSLANAAGAAGMCGGQALDIDATGQLQSLQHLQR 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +KTGAL+  A   GA+   A+  +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 173 MHALKTGALIRAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVES 225


>gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa]
 gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa]
          Length = 258

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 7/199 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRV 75
           T++ ++  +    +  Q+ D++  A+RY++L  G K+    +      LF  N L A   
Sbjct: 60  TLIGEINQELDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPT 119

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-- 133
             A+E +H  SLIHDDLP MD+   RRG+P+ H  Y    AI+AG+ L    F  I S  
Sbjct: 120 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFSHIVSQT 179

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           P   + +    +++  +   +G +GM  GQ LD++        V  +Q+ K G +   + 
Sbjct: 180 PSDLVPEPRLLRVIAEIARAVGSRGMAAGQFLDLEG---GPNAVEFVQEKKYGEMGECSA 236

Query: 194 ESGAIMAHASQNEKERLRC 212
             G ++A A+ +E  R   
Sbjct: 237 VCGGLLAGATDDEIRRYEE 255


>gi|291459864|ref|ZP_06599254.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291417654|gb|EFE91373.1| geranyltranstransferase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 317

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 21/220 (9%)

Query: 38  RLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCYSLIH 89
            +  A+ Y+LL GGK++R  L+ E   LF+                 A +E IH +SL H
Sbjct: 33  EVTEAMNYSLLSGGKRLRPILILESYELFSPKEERDRLLRPLLYAFMAGMEMIHSFSLCH 92

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--------PKTQLKDN 141
           DDLP MD    RRG+ +   +Y E    +AG+GL  YAF+++S         P      +
Sbjct: 93  DDLPCMDGDRYRRGRKSTWYRYGEAMGTLAGDGLSLYAFQLVSKTAAEGFLKPGFSRYAS 152

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             ++ +  L+ + G+ GMLGGQ  D++   + + E ++ +I + KT AL+  A   GA++
Sbjct: 153 DVNEAVRLLSSSAGIHGMLGGQAADVRKTGQEMGEEELLLIYERKTAALISGALSIGALL 212

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           A AS      LR   + LG+ FQ+ DD+LD    E +L K
Sbjct: 213 AGASAESIALLREISKALGLAFQIRDDILDESGAEAELGK 252


>gi|17547542|ref|NP_520944.1| octaprenyl-diphosphate synthase [Ralstonia solanacearum GMI1000]
 gi|17429846|emb|CAD16530.1| probable octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthase) protein [Ralstonia solanacearum GMI1000]
          Length = 322

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+   +D ++   L    + +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 6   LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 59  LGYRGQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLY 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++        D++R   +L+   N+  +G +  Q+L++ D  + E +   + + K
Sbjct: 117 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +     +G  +G  FQ+ DDLLD   
Sbjct: 171 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218


>gi|262172465|ref|ZP_06040143.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus MB-451]
 gi|261893541|gb|EEY39527.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           mimicus MB-451]
          Length = 323

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|261839715|gb|ACX99480.1| geranyltranstransferase (ispA) [Helicobacter pylori 52]
          Length = 303

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 15/231 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV----- 67
           +R ++ L+   L    H+++ H     +     L GGK+ R  L      +L        
Sbjct: 14  ERFESFLNHHHL----HLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSN 69

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+
Sbjct: 70  QQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYS 129

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   +   Q+  + + KT
Sbjct: 130 FELLSN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLSLEQLTFLHEHKT 187

Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L+  +   G + +    +   + L+ FG   G+ FQ+ DD++D  +D  
Sbjct: 188 AKLISASLMMGLVASGIKDEGLFKWLQAFGLKTGLCFQVLDDIIDVTQDEE 238


>gi|269123398|ref|YP_003305975.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314724|gb|ACZ01098.1| Polyprenyl synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 282

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 15/236 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           +   LQ   K ID  +  +L +  S         +   + Y  LLGGK+IR  ++   A+
Sbjct: 1   MEIYLQNIRKDIDKSIRKVLKKHKSI------KEIDDMLEYGVLLGGKRIRPSIMYILAN 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           ++  +         +IE IH YSLIHDDLP MDN   RRG  TVH +Y E  A++ G+ L
Sbjct: 55  VYKKDKKCIENEAVSIELIHAYSLIHDDLPCMDNDNYRRGNLTVHKKYGEANAVLVGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
           LT AF +++  +   K +I +      ++  G +GM+ GQ LD+ +E    I+  ++  I
Sbjct: 115 LTLAFSVLAESEYSNKYSIVAL-----SYYSGHKGMILGQYLDLLNENKADINFDELMEI 169

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KT  L+  + E  AI    +   +  LR +   LG+ +Q+ DD+L+ E    K
Sbjct: 170 HLNKTAMLLMASVEIAAISLSINTEARNALRKYILYLGLAYQIQDDILEMESSFEK 225


>gi|78223658|ref|YP_385405.1| polyprenyl synthetase [Geobacter metallireducens GS-15]
 gi|78194913|gb|ABB32680.1| Polyprenyl synthetase [Geobacter metallireducens GS-15]
          Length = 322

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y L  GGK+IR  L+   A L        + + + IE IH  +L+HDD+  +DN  +RR
Sbjct: 35  EYVLASGGKRIRPTLLLLAAKLCGYTGDRHVPLASVIEFIHTATLLHDDV--VDNATLRR 92

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  + +  +    +++ G+ L + +F ++         ++R   ++S    I  +G +  
Sbjct: 93  GNASANEVWGNEASVLVGDFLFSKSFSLMVQAG-----DLRVLKVISDATTIIAEGEVL- 146

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+L   D  +   +   + K KT  L+  ACE+GAI+  A+  ++  LR FG +LGI FQ
Sbjct: 147 QLLCTSDLDMTLERYIEVVKSKTAVLLSAACEAGAILGKATPEQELALRDFGMDLGIAFQ 206

Query: 223 LADDLLDCEE 232
           L DD LD   
Sbjct: 207 LMDDTLDYTA 216


>gi|300702983|ref|YP_003744585.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957]
 gi|299070646|emb|CBJ41941.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CFBP2957]
          Length = 322

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+   +D ++   L    + +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 6   LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 59  LGYRGNHHHELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLY 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++        D++R   +L+   N+  +G +  Q+L++ D  + E +   + + K
Sbjct: 117 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +     +G  +G  FQ+ DDLLD   
Sbjct: 171 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218


>gi|153825628|ref|ZP_01978295.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2]
 gi|149740658|gb|EDM54765.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-2]
          Length = 304

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 24  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 81

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 82  AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 135

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 136 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 195

Query: 229 DCEED 233
           D   D
Sbjct: 196 DYTSD 200


>gi|153802102|ref|ZP_01956688.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3]
 gi|124122346|gb|EAY41089.1| octaprenyl-diphosphate synthase [Vibrio cholerae MZO-3]
          Length = 348

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 68  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239

Query: 229 DCEED 233
           D   D
Sbjct: 240 DYTSD 244


>gi|315162955|gb|EFU06972.1| geranyltranstransferase [Enterococcus faecalis TX0645]
          Length = 293

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIYAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|152972111|ref|YP_001337257.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896694|ref|YP_002921439.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042746|ref|ZP_06015900.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|150956960|gb|ABR78990.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238549021|dbj|BAH65372.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259039971|gb|EEW41088.1| octaprenyl-diphosphate synthase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 323

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYQGSAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++   +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTQLGS-----LKILEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   ++A  +  E+  L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAASQCAGLLADCTAEEERALQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSSD 219


>gi|254363100|ref|ZP_04979154.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213]
 gi|153094987|gb|EDN75550.1| octaprenyl-diphosphate synthase [Mannheimia haemolytica PHL213]
          Length = 315

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 44  RYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y + GG K+IR  +    A          +   A IE +H  +L+HDD+  +D   +RR
Sbjct: 25  HYIIAGGGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDV--VDESDMRR 82

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+PT +  +    +++ G+ + T +F++++       D++R   ++S   N   +G +  
Sbjct: 83  GRPTANAHFGNAASVLVGDFIYTRSFQMMTDL-----DSLRVLKVMSAATNALAEGEV-Q 136

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q++++ D    E     +   KT  L   A +  AI A AS+  +  L+ +G  LG  FQ
Sbjct: 137 QLMNVNDPNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQ 196

Query: 223 LADDLLDCEE 232
           L DD+LD   
Sbjct: 197 LIDDILDYSA 206


>gi|104780055|ref|YP_606553.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48]
 gi|95109042|emb|CAK13738.1| octaprenyl-diphosphate synthase [Pseudomonas entomophila L48]
          Length = 322

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A AS  ++E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEEIYMDVIRGKTAMLFEASTHSAAALAGASDEQREALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD + D  
Sbjct: 214 LDYKGDSE 221


>gi|59710884|ref|YP_203660.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114]
 gi|59478985|gb|AAW84772.1| octaprenyl diphosphate synthase [Vibrio fischeri ES114]
          Length = 323

 Score =  188 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T +F++++S  +     I+   ++S   N+  +G +  Q+++  
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A Q  +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|332528440|ref|ZP_08404432.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624]
 gi|332042119|gb|EGI78453.1| farnesyltranstransferase [Hylemonella gracilis ATCC 19624]
          Length = 316

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + +D ++ + L              +    RY +  GGK++R  L+   +   +      
Sbjct: 2   REVDRVISERLDSGV--------PLVGQVARYIIGAGGKRLRPALLLLVSGALDYRGPHR 53

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             + A +E IH  +L+HDD+  +D+  +RRG PT +  +    +++ G+ L + AF+++ 
Sbjct: 54  HSLAAVVEFIHTATLLHDDV--VDDSKLRRGNPTANETFGNAASVLVGDFLYSRAFQMMV 111

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
             ++     +R   +L+   N+  +G +  Q++++ +  ++E     + + KT  L   +
Sbjct: 112 EAQS-----MRVMEVLAEATNVIAEGEV-QQLMNMHNADLNEAGYVHVIRSKTAKLFEAS 165

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              GAI+A A +  +     +G+ LG  FQ+ DD+LD   D
Sbjct: 166 ARCGAILAGADKTLEAACADYGQALGTAFQVIDDVLDYAGD 206


>gi|296104900|ref|YP_003615046.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059359|gb|ADF64097.1| octaprenyl diphosphate synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 323

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  QGKAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKVLEVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   I+A  +  +++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGILAGCTAAQEKGLQDYGRYLGTAFQLIDDLLDYSAD 219


>gi|51594815|ref|YP_069006.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
           32953]
 gi|153949434|ref|YP_001402567.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis IP
           31758]
 gi|170025973|ref|YP_001722478.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis YPIII]
 gi|186893824|ref|YP_001870936.1| octaprenyl diphosphate synthase [Yersinia pseudotuberculosis PB1/+]
 gi|51588097|emb|CAH19703.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP
           32953]
 gi|152960929|gb|ABS48390.1| octaprenyl-diphosphate synthase [Yersinia pseudotuberculosis IP
           31758]
 gi|169752507|gb|ACA70025.1| Polyprenyl synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186696850|gb|ACC87479.1| Polyprenyl synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 323

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALNYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLQS-----MRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S AI++ AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEESYMQVIYSKTARLFEAAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   +
Sbjct: 215 DYSAE 219


>gi|229512636|ref|ZP_04402105.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TMA 21]
 gi|229350313|gb|EEO15264.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TMA 21]
          Length = 323

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|207744381|ref|YP_002260773.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
           protein [Ralstonia solanacearum IPO1609]
 gi|206595786|emb|CAQ62713.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthase)
           protein [Ralstonia solanacearum IPO1609]
          Length = 338

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+   +D ++   L    + +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 36  LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 88

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 89  LGYRGNHHYELAAVVEFIHTAALLHDDV--VDESELRRGRQTANAVFGNAASVLVGDFLY 146

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++        D++R   +L+   N+  +G +  Q+L++ D  + E +   + + K
Sbjct: 147 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 200

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +     +G  +G  FQ+ DDLLD   
Sbjct: 201 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 248


>gi|171463010|ref|YP_001797123.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192548|gb|ACB43509.1| Polyprenyl synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 334

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 17/221 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71
           K +D ++   L    + +  Q +  ++ A      GGK++R  L+   A           
Sbjct: 22  KALDEVIRQRLASKVA-LIDQISTYIIQA------GGKRVRPALLMLVAKALANGKQTPH 74

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + AF+++
Sbjct: 75  ILEMSAVVEFIHTATLLHDDV--VDESTLRRGRKTANAAFGNAASVLVGDFLYSRAFQMM 132

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
             P     +++R   +LS   N   +G +  Q+L++ D  +DE     + + KT  L   
Sbjct: 133 VDP-----NDLRVMQILSDATNTIAEGEVL-QLLNMNDPEVDEESYLQVIRYKTAKLFEA 186

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + E GAI+A+A+  ++E+   FG ++G  FQL DDLLD   
Sbjct: 187 STELGAILANATNAQREQAAAFGRHIGTAFQLMDDLLDYTA 227


>gi|258623396|ref|ZP_05718400.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573]
 gi|258584362|gb|EEW09107.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM573]
          Length = 348

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 68  GGKRLRPLLAVLSAKALGYHGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239

Query: 229 DCEED 233
           D   D
Sbjct: 240 DYTSD 244


>gi|294634497|ref|ZP_06713032.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685]
 gi|291092011|gb|EFE24572.1| octaprenyl-diphosphate synthase [Edwardsiella tarda ATCC 23685]
          Length = 323

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + + A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALHYQGDRHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLQS-----LRILELMSAATNVIAEGEVM-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +  AI+A A  +++  L+ +G  LG  FQL DDLL
Sbjct: 155 DPDISEENYMQVIYSKTARLFEAAAQCSAILAGADTHQELALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D + D
Sbjct: 215 DYDAD 219


>gi|154686522|ref|YP_001421683.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
           amyloliquefaciens FZB42]
 gi|154352373|gb|ABS74452.1| HepT [Bacillus amyloliquefaciens FZB42]
          Length = 349

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 13/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ++  +D +  +    +++ +   L  A  + L  GGK+IR   V       + +      
Sbjct: 39  LNDDIDVIERELEQTVRSDYP-LLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKY 97

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V   +E IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++  
Sbjct: 98  VAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRL 155

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                D  ++  +LS T      G +  Q+ D  +   +        K KT  L+  +C+
Sbjct: 156 -----DEPKAHRILSKTIVEVCLGEIE-QIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQ 209

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            GAI + A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 210 LGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 254


>gi|311277840|ref|YP_003940071.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
 gi|308747035|gb|ADO46787.1| Polyprenyl synthetase [Enterobacter cloacae SCF1]
          Length = 323

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           N ++I+ +    +    + +  Q N   +L++ + Y ++  GGK+IR  +    A     
Sbjct: 2   NLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T A
Sbjct: 62  QGNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S  +     ++   ++S   N+  +G +  Q++++ D  I E     +   KT  
Sbjct: 120 FQMMTSLGS-----LKILEVMSEAVNVIAEGEVL-QLMNVNDPDITEESYMRVIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   A +   ++A  S  +++ L+ +G  LG  FQL DDLLD   D
Sbjct: 174 LFEAAAQCSGLLAGCSDAQEKGLQDYGRYLGTAFQLIDDLLDYSSD 219


>gi|197333941|ref|YP_002155036.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11]
 gi|197315431|gb|ACH64878.1| octaprenyl-diphosphate synthase [Vibrio fischeri MJ11]
          Length = 323

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T +F++++S  +     I+   ++S   N+  +G +  Q+++  
Sbjct: 101 AEFGNAASVLVGDFIYTRSFQMMTSLGS-----IKILSLMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A Q  +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPNTTEESYMQVIYSKTARLFEAATQIGAILNDAPQEIETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|303233683|ref|ZP_07320337.1| polyprenyl synthetase [Finegoldia magna BVS033A4]
 gi|302495117|gb|EFL54869.1| polyprenyl synthetase [Finegoldia magna BVS033A4]
          Length = 269

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 17/232 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           +E  K I+  L +L         +  ND++  A++Y L+  G K++R  L      +FN 
Sbjct: 4   KEIVKLINNSLKEL---------SFSNDKIGEAMKYTLVDDGAKRLRPLLFLLTYQMFNE 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    +    +IE IH YSL+HDDL  MD+   RRGK TVH +Y E  A++ G+ LL Y+
Sbjct: 55  SISEPMNYALSIELIHNYSLVHDDLECMDDDDYRRGKLTVHKKYGEDIAVLVGDALLNYS 114

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           FE++S     +K+ + +     +    G  GM+ GQ+LDI  E I E  +  I   KT  
Sbjct: 115 FEVLSES---IKNEVDAMCANYIVKKSGCFGMIRGQLLDIDSE-ISEDNIIEIYDKKTCN 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           L+  +  S  I++        +L  +  NLG+ FQ+ DDL+D E D+   KK
Sbjct: 171 LLKASTVSAGILSKVDDETLLKLENYAFNLGMAFQIIDDLMDYENDIKIEKK 222


>gi|294501072|ref|YP_003564772.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
           QM B1551]
 gi|294351009|gb|ADE71338.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
           QM B1551]
          Length = 321

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T+++  L QT    +T   D   +++     GGK+IR   V   A   + N      V  
Sbjct: 15  TLIEKELEQTVHTDETLITD---ASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D+   RRGKPT+  ++D   A+  G+ +   A E++S  K  
Sbjct: 72  ALELIHMASLVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVK-- 127

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
              ++ +  +LS T      G +  Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 128 ---DVEAHKILSNTMVELTLGEIE-QIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           I A A ++  +RL  FG  +G+ FQ+ DD+LD    EE L K
Sbjct: 184 IAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGK 225


>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
 gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
          Length = 261

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 10/205 (4%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           +  A+RYA+ GG++           L       A+    A+E I     + DDLPS+D+ 
Sbjct: 1   MHEAMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDS 60

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +R GKPTVH  +   TA+ AG  LL   FE ++    +   +  ++++  ++  IG  G
Sbjct: 61  ELRHGKPTVHRAFGIPTALFAGTALLALGFEHLA---ARYSGDTAARMVAEVSRAIGSTG 117

Query: 159 MLGGQMLD----IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +L GQ +D      D  ++   +  +   KT AL+  +  +GAI   AS+ E E LR +G
Sbjct: 118 LLAGQAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYG 177

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
              G+++Q+ DD+ D     E+L K
Sbjct: 178 RVTGLLYQIVDDVADATKTMEELGK 202


>gi|34557991|ref|NP_907806.1| geranylgeranyl pyrophosphate synthase [Wolinella succinogenes DSM
           1740]
 gi|34483709|emb|CAE10706.1| GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Wolinella succinogenes]
          Length = 286

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 12/234 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNV 67
           L+   +  +  L++            +N+ L   +R    GGK+ R  L+    ++L  +
Sbjct: 3   LESVMEGFERFLEE-EAPLFEGFHPHYNEYLWEMVR---NGGKRFRPRLLLGVVSALAPL 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              +A     A+E +H YSLIHDDLP+MDN   RRG PT+H++YDE +A++AG+ L T+A
Sbjct: 59  LVKSAYAPALALEILHTYSLIHDDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHA 118

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           F +++     L  + +  L+  L    G  GM+ GQ LD   E   ++  ++  I   KT
Sbjct: 119 FYLLAQA--PLGSDTKVALVRELASAGGAGGMVLGQALDCYFEHQKLEIEKLRFIHLHKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           G L+  + + GAI+A  S+ E+ RL   G  LG++FQ+ DD++D    EE+  K
Sbjct: 177 GRLIAASLKMGAIIAALSKEEQARLEEIGLKLGLLFQVQDDIIDATWSEEEAGK 230


>gi|146281341|ref|YP_001171494.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
 gi|145569546|gb|ABP78652.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri A1501]
 gi|327479520|gb|AEA82830.1| octylprenyl diphosphate synthase [Pseudomonas stutzeri DSM 4166]
          Length = 322

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV    S           + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLSGSALGHQGEQLRLLAAIIEFLHTSTLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L   +FE++        D++    ++S    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYARSFEMMVEL-----DSMPVMRIISQATRVIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A AS+ ++E LR FG++LGI FQL DDL
Sbjct: 154 RDASTTEEIYMEVIRGKTAMLFEASTHSAATLAGASEQQREALRTFGDHLGIAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD + D  
Sbjct: 214 LDYQGDAE 221


>gi|295706420|ref|YP_003599495.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
           DSM 319]
 gi|294804079|gb|ADF41145.1| heptaprenyl diphosphate synthase component II [Bacillus megaterium
           DSM 319]
          Length = 321

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T+++  L QT    +T   D   +++     GGK+IR   V   A   + N      V  
Sbjct: 15  TLIEKELEQTVHTDETLITD---ASLHLLQAGGKRIRPVFVLLAAKFGHYNIDQIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D+   RRGKPT+  ++D   A+  G+ +   A E++S  K  
Sbjct: 72  ALELIHMASLVHDDV--IDDADKRRGKPTIKAKWDNRIAMYTGDYIFARALEVMSEVK-- 127

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
              ++ +  +LS T      G +  Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 128 ---DVEAHKILSNTMVELTLGEIE-QIKDKYNLNQNLRVYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           I A A ++  +RL  FG  +G+ FQ+ DD+LD    EE L K
Sbjct: 184 IAAGAPEDIHKRLFWFGYYVGMSFQITDDILDFISSEEQLGK 225


>gi|300859805|ref|ZP_07105893.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11]
 gi|300850623|gb|EFK78372.1| geranyltranstransferase [Enterococcus faecalis TUSoD Ef11]
 gi|315144365|gb|EFT88381.1| geranyltranstransferase [Enterococcus faecalis TX2141]
          Length = 293

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++ D + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVDFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTLFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|28897101|ref|NP_796706.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|28805310|dbj|BAC58590.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 333

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 53  GGKRLRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 111 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILQLMSNAVNVIAEGEV-QQLMNCN 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  L+ +G+ LG  FQL DD++
Sbjct: 165 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVM 224

Query: 229 DCEED 233
           D   D
Sbjct: 225 DYTSD 229


>gi|258542159|ref|YP_003187592.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633237|dbj|BAH99212.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636296|dbj|BAI02265.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639349|dbj|BAI05311.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642405|dbj|BAI08360.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645460|dbj|BAI11408.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648513|dbj|BAI14454.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651566|dbj|BAI17500.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654557|dbj|BAI20484.1| geranylgeranyl pyrophosphate synthase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 356

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDN 97
           A      GGK++R  L    A +   N+       + + A +E IH  +L+HDD+  +D+
Sbjct: 64  AAHLVAAGGKRLRPLLTLAAARMCGYNNQDGRMRHVEIAACVEFIHTATLLHDDV--VDD 121

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  + +  +    +++ G+ L   +F+I+++       ++    +LS       +
Sbjct: 122 SQLRRGLASANAIFGNKASVLVGDFLFARSFQILTA-----DASLGVMAILSAASATLAE 176

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           G +  QM    D      Q   +   KT AL   ACESGA++  A+  ++E LR +G NL
Sbjct: 177 GEVM-QMTTQNDLSTSVEQYLQVIYGKTAALFAAACESGAVIGEATPEQREALRMYGANL 235

Query: 218 GIIFQLADDLLDCEED---LPKK 237
           G+ FQL DD LD   D   L K+
Sbjct: 236 GMAFQLVDDALDYAADQATLGKE 258


>gi|322831197|ref|YP_004211224.1| Polyprenyl synthetase [Rahnella sp. Y9602]
 gi|321166398|gb|ADW72097.1| Polyprenyl synthetase [Rahnella sp. Y9602]
          Length = 323

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 113/221 (51%), Gaps = 11/221 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA 72
           ID   DD+    AS ++  +++  L++ + Y ++  GGK+IR  +    A   +      
Sbjct: 7   IDLTQDDMAAVNASILEQLNSEVSLINQLGYYIISGGGKRIRPMIAVLAAKALSYQGDKH 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           ++V A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T AF++++
Sbjct: 67  IKVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMT 124

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
             ++     +    +++   N+  +G +  Q+++  D  I E     +   KT  L   A
Sbjct: 125 DLES-----LPVLALMAKAVNVIAEGEV-QQLINCNDPDITEASYMQVIYSKTARLFEAA 178

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++ A++A  +  +   L+ +G  LG  FQL DDLLD + D
Sbjct: 179 SQASAMLAGGNNEQITALQDYGRYLGTAFQLIDDLLDYDAD 219


>gi|189345859|ref|YP_001942388.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
 gi|189340006|gb|ACD89409.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
          Length = 332

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 16/241 (6%)

Query: 1   MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
           M   L  +L +E  +R    ++D L   A        + L +  RY + G GK+IR FL 
Sbjct: 1   MTITLTQELVEEKYRRYHKRINDAL---AGCFSADKPETLYAPARYIIEGKGKRIRPFLT 57

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              +     +   AL    A+E +H ++L+HDD+  MD   +R G+P VH Q++   AI+
Sbjct: 58  LLASESVCGSSENALNAALAVEILHNFTLMHDDI--MDAADLRHGRPAVHKQWNTNVAIL 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET 175
           +G+ ++ YA+E+    KT+          L    N     +  GQ LD++ E       +
Sbjct: 116 SGDMMIAYAYELALQSKTERHRE------LIHILNHANITICEGQALDMELELKKNATIS 169

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
               +   KTG L+  A E+G +  + +Q +   L  FGE +G  FQ+ DD LD   +  
Sbjct: 170 DYLDMIAKKTGRLISAALEAGGVAGNGTQEQLNALVTFGEKIGRAFQIQDDFLDIMAEDG 229

Query: 236 K 236
           K
Sbjct: 230 K 230


>gi|156973119|ref|YP_001444026.1| octaprenyl-diphosphate synthase [Vibrio harveyi ATCC BAA-1116]
 gi|156524713|gb|ABU69799.1| hypothetical protein VIBHAR_00798 [Vibrio harveyi ATCC BAA-1116]
          Length = 323

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A +N +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|103486007|ref|YP_615568.1| trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256]
 gi|98976084|gb|ABF52235.1| Trans-hexaprenyltranstransferase [Sphingopyxis alaskensis RB2256]
          Length = 337

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 8/235 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           + G +P  L      +   ++++       MQ++       A      GGK++R  L   
Sbjct: 8   LRGTVPPSLDPMMTLVAADMNEVNAVILDRMQSEVPLIPELAGHLIAGGGKRMRPMLTLA 67

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           C  L +       ++ AA+E IH  +L+HDD+  +D   +RRG+ T ++ +    +++ G
Sbjct: 68  CGRLLDYPGRRHCKLAAAVEFIHTATLLHDDV--VDKSDLRRGRKTANVIWGNSASVLVG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L + AFE++    +     ++   +LS    +  +G +  Q+   +     E Q   I
Sbjct: 126 DFLFSRAFEVMVEDGS-----LKVLKILSRASAVIAEGEVN-QLSAQRRIETSEDQYLAI 179

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KT  L   AC+  A++A   +  +  L  +G NLGI FQL DD +D   D  
Sbjct: 180 INAKTAELFAAACKIAAVVAERDEATEAALDAYGRNLGIAFQLVDDAIDYVSDAE 234


>gi|222085054|ref|YP_002543583.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter
           K84]
 gi|221722502|gb|ACM25658.1| octaprenyl-diphosphate synthase protein [Agrobacterium radiobacter
           K84]
          Length = 455

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 22/232 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           + + +R++ ++   L +  S +Q   +  + L+S+      GGK++R  L    A+L+N 
Sbjct: 142 KADMERVNQLI---LSKAGSDVQMIPEVAEHLISS------GGKRLRPMLTIASAALYNY 192

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +++  ++E +H  +L+HDD+  +D   +RRGK T  + +    +++ G+ LL  A
Sbjct: 193 QGDNHIKLATSVEFLHTATLLHDDV--VDESDLRRGKSTARMIWGNQASVLVGDFLLGQA 250

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++    +     + +  +LS    +  +G +  Q+   ++    E     + + KT A
Sbjct: 251 FRMMVEVGS-----LEALDVLSSAACVIAEGEVL-QLSVSKNMETTEDDYLSVIRAKTAA 304

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           L   A E G I+A+A + E+  L+ +G NLG+ FQL DD LD      DL K
Sbjct: 305 LFSAAAEVGPIVANAGKAERNALKSYGTNLGLAFQLVDDALDYGGKAADLGK 356


>gi|212696081|ref|ZP_03304209.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676710|gb|EEB36317.1| hypothetical protein ANHYDRO_00617 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 279

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 7/223 (3%)

Query: 12  NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN- 68
           N K  D IL  D  ++  A   +   ++ L  A+ YA   GK+IR  +  E   +   + 
Sbjct: 5   NKKEFDRILNTDKKIIDQAMKEKFVDDNPLNEALIYASDSGKRIRPIVFLETCRMLLGDK 64

Query: 69  -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +    ++E +H YSL+HDD+P MDN   RRGK TVH ++ E  AI+ G+ LL++A
Sbjct: 65  LDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSLLSFA 124

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTG 186
           FE I      ++D    +    L    G  GM+ GQ+ DI+ ++  + + +  + K KT 
Sbjct: 125 FENI--LNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYKNKTS 182

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            L   A     +       +  +L  +   LG+ FQL DD+LD
Sbjct: 183 RLFMAALMMAGLYCQLDDEKLTKLENYAYYLGMAFQLQDDILD 225


>gi|170725365|ref|YP_001759391.1| polyprenyl synthetase [Shewanella woodyi ATCC 51908]
 gi|169810712|gb|ACA85296.1| Polyprenyl synthetase [Shewanella woodyi ATCC 51908]
          Length = 323

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   + N    L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLSILAARAVDYNGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++   +     +    +L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELGS-----MEVLEVLADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A + +  +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPNTTEESYMRVIYCKTAKLFEAATRLAGVLADSPKEIQVALADYGKYLGTAFQLTDDLL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYTADTE 221


>gi|240850066|ref|YP_002971459.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup]
 gi|240267189|gb|ACS50777.1| octaprenyl-diphosphate synthase [Bartonella grahamii as4aup]
          Length = 358

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 109/223 (48%), Gaps = 15/223 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           Q++ +R++  +  +  ++   M  + ++ L+S+      GGK++R  +    A +F    
Sbjct: 45  QKDMERVNQFILSM-AKSEVEMIPEISNHLISS------GGKRLRPMITLASAHMFGYQS 97

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++  A+E +H  +L+HDD+  +D   +RRGK T  + +    +++ G+ LL  AF+
Sbjct: 98  DGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTARMIWGNQASVLVGDFLLGQAFK 155

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++    +     I +  +L+    I  +G +  Q+   ++     +    I   KT AL 
Sbjct: 156 MMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAAKNIKTSPSDYLKIINAKTAALF 209

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A E G I+A     E+  LR +G +LG+ FQL DD LD   
Sbjct: 210 SAAAEVGPIVAGYGHKERSSLREYGTSLGLAFQLIDDALDYSG 252


>gi|15676185|ref|NP_273317.1| geranyltranstransferase [Neisseria meningitidis MC58]
 gi|7225485|gb|AAF40715.1| geranyltranstransferase [Neisseria meningitidis MC58]
          Length = 259

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 79/197 (40%), Positives = 112/197 (56%), Gaps = 5/197 (2%)

Query: 43  IRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +RYA L GGK++R  LV   + L    H    +  AAIE IH YSL+HDD+P+MDN  +R
Sbjct: 1   MRYAALDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGKPT HI+Y E TA++ G+ L T AF+++S P T+L    +  ++  L    G +GM G
Sbjct: 61  RGKPTCHIKYGEATALLTGDALQTQAFDVLSRP-TELPAARQLAMLSVLAKAGGSRGMAG 119

Query: 162 GQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLG 218
           GQ +D+ +      +  +  +  +KTGAL+  A   GA      S  E   L  +   LG
Sbjct: 120 GQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLG 179

Query: 219 IIFQLADDLLDCEEDLP 235
           + FQ+ DD+LDCE D  
Sbjct: 180 LAFQVIDDVLDCEADTA 196


>gi|188532487|ref|YP_001906284.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99]
 gi|188027529|emb|CAO95376.1| Octaprenyl diphosphate synthase [Erwinia tasmaniensis Et1/99]
          Length = 324

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 13/227 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFN- 66
           N ++I+ +    +    + +  Q N    L++ + Y ++  GGK+IR  +    A   N 
Sbjct: 2   NLEQINELTAQDMADVNATILDQLNSDVSLINQLGYYIINGGGKRIRPMIAVLAARAIND 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + V A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T 
Sbjct: 62  YAGKQHITVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF++++S  +     ++   ++S   N+  +G +  Q+++  D  I E     +   KT 
Sbjct: 120 AFQMMTSLGS-----LKVLALMSEAVNVIAEGEVL-QLMNCNDPDITEESYMRVIYSKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A +S AI+A A+ ++++ L+ +G  +G  FQL DDLLD   D
Sbjct: 174 RLFEAAAQSSAILAGATASQEQALQDYGRYIGTAFQLIDDLLDYSAD 220


>gi|85058340|ref|YP_454042.1| octaprenyl diphosphate synthase [Sodalis glossinidius str.
           'morsitans']
 gi|84778860|dbj|BAE73637.1| octaprenyl-diphosphate synthase [Sodalis glossinidius str.
           'morsitans']
          Length = 323

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 18/235 (7%)

Query: 1   MNGGLPSKL-QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLV 58
           MN    ++L  ++   ++T + + L    + +             Y + GG K+IR  + 
Sbjct: 1   MNIEQITELTAQDMAEVNTAIREQLNSEVALINQLG--------HYIISGGGKRIRPMIA 52

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +  +    +++
Sbjct: 53  VLAARALHYQGKQHVTVAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVL 110

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ + T AF+++++ ++     +R   ++S   NI  +G +  Q+++  D  I      
Sbjct: 111 VGDFIYTRAFQMMTALES-----LRVLELMSEAVNIIAEGEVL-QLMNCNDPDITIDNYM 164

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KT  L   A +S AI+A A   ++  LR +G  LG  FQL DDLLD   D
Sbjct: 165 RVIYSKTARLFEAASQSSAILAGADACQEAALRDYGRYLGTAFQLIDDLLDYGAD 219


>gi|317495197|ref|ZP_07953567.1| polyprenyl synthetase [Gemella moribillum M424]
 gi|316914619|gb|EFV36095.1| polyprenyl synthetase [Gemella moribillum M424]
          Length = 286

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 8/221 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
            IL+D   +     +T   + L  +I Y+L+  GKKIR          +  +      V 
Sbjct: 13  DILNDFAKKYIE--KTDMPELLKKSISYSLVNDGKKIRPLSFLYLLKYYGEDFAEYFDVA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            AIE +H YSL+HDDLP MDN   R GK T H  + +  A++ G+ +LT AFE++S+  +
Sbjct: 71  LAIELVHTYSLVHDDLPEMDNDDYRWGKLTNHKVFGQDVAVLTGDAMLTLAFEVLSN--S 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACE 194
            +K +++ +L+    +  G  GM+ GQ+ D   ++  ++   +  +  +KTG L+    +
Sbjct: 129 NIKPDLKVKLISQFANYSGAMGMIAGQIYDIKQKEYEVNADYLRRMHSLKTGKLIELPLD 188

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
               +A     E   +  FG+ LGI +Q+ DD+LD   D  
Sbjct: 189 FACQIAG-KVEELSDINSFGKELGIAYQIKDDILDYYGDFE 228


>gi|126726042|ref|ZP_01741884.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium
           HTCC2150]
 gi|126705246|gb|EBA04337.1| decaprenyl diphosphate synthase [Rhodobacterales bacterium
           HTCC2150]
          Length = 332

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 13/224 (5%)

Query: 14  KRIDTILDDLLLQTA----SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            R+   L D + Q      + M ++H  R+     + +  GGK+IR  +    A +   +
Sbjct: 12  DRLAKALADEMAQVNDMIRARMASEHAPRIPEVTAHLVEAGGKRIRPMMTLAAAKMCGYD 71

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + + A +E IH  +L+HDD+  +D    RRG+ T ++ +D  ++I+ G+ L   AF
Sbjct: 72  GPYHINLAATVEFIHTATLLHDDV--VDESSQRRGRATANLLWDNKSSILVGDYLFARAF 129

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++   ++     +    +LS       +G +  QM   QD   DE     + + KT AL
Sbjct: 130 QLMVEAES-----LTVLDILSNASATIAEGEVL-QMTAAQDLETDEATYLKVVRGKTAAL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              A E G ++A+A     + L  FG+ LGI FQ+ DDLLD + 
Sbjct: 184 FSAATEVGGVIANAPAEHTKALFDFGDALGISFQIVDDLLDYDG 227


>gi|254225991|ref|ZP_04919591.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51]
 gi|254291338|ref|ZP_04962132.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226]
 gi|125621447|gb|EAZ49781.1| octaprenyl-diphosphate synthase [Vibrio cholerae V51]
 gi|150422794|gb|EDN14747.1| octaprenyl-diphosphate synthase [Vibrio cholerae AM-19226]
          Length = 348

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 68  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239

Query: 229 DCEED 233
           D   D
Sbjct: 240 DYTSD 244


>gi|300115547|ref|YP_003762122.1| trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113]
 gi|299541484|gb|ADJ29801.1| Trans-hexaprenyltranstransferase [Nitrosococcus watsonii C-113]
          Length = 322

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 14/232 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLL--SAIRYAL-LGGKKIRSFLVTECASLFNV 67
           +     D + DD+    A   Q  H+D +L      Y +  GGK++R  +V   A  F+ 
Sbjct: 2   DIQSAYDLVADDMRSVDALIQQRLHSDVVLINQLGHYIINSGGKRLRPMVVLLSARAFDY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + A IE IH  +L+HDD+  +D+  +RRG+ T +  +    +++ G+ L + A
Sbjct: 62  QGSYHIDIAAIIEFIHTATLLHDDV--VDSSELRRGRKTANNIWGSEASVLVGDFLYSRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           FE++        D++R   +L+ T N   +G +  Q+L+  +    E     I + KT  
Sbjct: 120 FEMMVG-----VDSMRVMEILARTTNTIAEGEVM-QLLNCHEPDTTEECYLEIIRSKTAK 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           L   A + GA++ H S  E++ +  +G +LG  FQL DD+LD     EDL K
Sbjct: 174 LFEAATQLGAVLCHRSSAEEKLMATYGMHLGTAFQLTDDVLDYSAFSEDLGK 225


>gi|114705301|ref|ZP_01438209.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506]
 gi|114540086|gb|EAU43206.1| geranyltranstransferase protein [Fulvimarina pelagi HTCC2506]
          Length = 315

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 76/228 (33%), Positives = 119/228 (52%), Gaps = 10/228 (4%)

Query: 6   PSKLQEN---SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
           P++L+E     KRI+  L ++L         +  ++L  AI  + L  GK++R  L    
Sbjct: 3   PTRLEETTRLQKRIEQRLGEVLPACL-----EGQEQLRDAIATSVLAPGKRLRPLLAVLT 57

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   N +   A+  G AIE IH  SL+ DDLP MD+  +RRG+P  H+ Y E TA++A  
Sbjct: 58  AIDLNGDVEAAIEGGCAIELIHTASLVLDDLPCMDDATLRRGQPPTHVAYGEDTALLAVI 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            +++ AFE++++  + L    R++ + +L   +G  G++ GQ  D++             
Sbjct: 118 AMISRAFELLAAAPS-LNPEQRTRSVAALGKAVGTSGLVAGQFADLKGGSGSTDAAARTN 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +KTGAL   A E G I + A +  +  L  F   LG+ FQL DDLLD
Sbjct: 177 ALKTGALFLAAVEIGMIGSGAPRETRRELEAFARELGLAFQLLDDLLD 224


>gi|261342632|ref|ZP_05970490.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC
           35316]
 gi|288315280|gb|EFC54218.1| octaprenyl-diphosphate synthase [Enterobacter cancerogenus ATCC
           35316]
          Length = 323

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 101/201 (50%), Gaps = 10/201 (4%)

Query: 35  HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
            + +L++ + Y ++  GGK+IR  +    A          + + A IE IH  +L+HDD+
Sbjct: 27  SDVQLINQLGYYIVSGGGKRIRPMIAILAARAVGYQGNAHVTIAALIEFIHTATLLHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   
Sbjct: 87  --VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAV 139

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           N+  +G +  Q++++ D  I E     +   KT  L   A +   I+   +  +++ L+ 
Sbjct: 140 NVIAEGEVL-QLMNVNDPDITEESYMRVIYSKTARLFEAAAQCSGILGGCTDVQEKGLQD 198

Query: 213 FGENLGIIFQLADDLLDCEED 233
           +G  LG  FQL DDLLD   D
Sbjct: 199 YGRYLGTAFQLIDDLLDYSAD 219


>gi|309805530|ref|ZP_07699575.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c]
 gi|308165181|gb|EFO67419.1| polyprenyl synthetase [Lactobacillus iners LactinV 09V1-c]
          Length = 288

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 22/236 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
              +I++ L + L  T       ++ +    + Y+ L GGK++R  L      + +    
Sbjct: 10  YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    +
Sbjct: 64  EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
            I+            +L+  +T  IG  GM GGQ +DI          +ET +  ++ +K
Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           TG L+  + +  A  A++S   +  L  F E  G  +Q+ DD++D  +      KK
Sbjct: 178 TGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233


>gi|149909332|ref|ZP_01897988.1| geranyltranstransferase [Moritella sp. PE36]
 gi|149807649|gb|EDM67597.1| geranyltranstransferase [Moritella sp. PE36]
          Length = 296

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 88/233 (37%), Positives = 128/233 (54%), Gaps = 6/233 (2%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +L  +  R    ++D L Q  + + T H+ +L +A+ Y LL GGK+IR  +V     +  
Sbjct: 2   QLSNSITRYQGRINDYLQQQINLLPT-HDTQLAAAMEYGLLQGGKRIRPVIVYAVGEMLG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           VN        AAIE IH YSLIHDDLP+MD+  +RRG+PT HI++D  TAI+AG+ L  +
Sbjct: 61  VNLRDLDGPAAAIESIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDHATAILAGDALQPF 120

Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183
           AFE++         +  R  ++ SLT   G  GM GGQ +D+   D+ I  TQ+  I   
Sbjct: 121 AFEMLLDCALAPEAEKNRFAMLKSLTQASGYSGMCGGQAMDLAATDKQISLTQLEAIHNN 180

Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KTGAL+  A + G + + H S      L  +   +G+ FQ+ DD+LD   D  
Sbjct: 181 KTGALINCAAKLGCLASPHCSIELLAALDKWSNAIGLAFQVQDDILDIISDTE 233


>gi|15640461|ref|NP_230088.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121590773|ref|ZP_01678102.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80]
 gi|121727265|ref|ZP_01680424.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52]
 gi|147674613|ref|YP_001218702.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
 gi|153819559|ref|ZP_01972226.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457]
 gi|153822596|ref|ZP_01975263.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33]
 gi|153830825|ref|ZP_01983492.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39]
 gi|227080645|ref|YP_002809196.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2]
 gi|254850665|ref|ZP_05240015.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10]
 gi|298501034|ref|ZP_07010835.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757]
 gi|9654858|gb|AAF93607.1| octaprenyl-diphosphate synthase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547375|gb|EAX57489.1| octaprenyl-diphosphate synthase [Vibrio cholerae 2740-80]
 gi|121630384|gb|EAX62779.1| octaprenyl-diphosphate synthase [Vibrio cholerae V52]
 gi|126509895|gb|EAZ72489.1| octaprenyl-diphosphate synthase [Vibrio cholerae NCTC 8457]
 gi|126519900|gb|EAZ77123.1| octaprenyl-diphosphate synthase [Vibrio cholerae B33]
 gi|146316496|gb|ABQ21035.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
 gi|148873684|gb|EDL71819.1| octaprenyl-diphosphate synthase [Vibrio cholerae 623-39]
 gi|227008533|gb|ACP04745.1| octaprenyl-diphosphate synthase [Vibrio cholerae M66-2]
 gi|227012288|gb|ACP08498.1| octaprenyl-diphosphate synthase [Vibrio cholerae O395]
 gi|254846370|gb|EET24784.1| octaprenyl-diphosphate synthase [Vibrio cholerae MO10]
 gi|297540282|gb|EFH76342.1| octaprenyl-diphosphate synthase [Vibrio cholerae MAK 757]
          Length = 348

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 68  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239

Query: 229 DCEED 233
           D   D
Sbjct: 240 DYTSD 244


>gi|299065629|emb|CBJ36801.1| octaprenyl diphosphate synthase [Ralstonia solanacearum CMR15]
          Length = 322

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+   +D ++   L    + +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 6   LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 59  LGYRGQHHYELAAVVEFIHTATLLHDDV--VDESELRRGRQTANAAFGNAASVLVGDFLY 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++        D++R   +L+   N+  +G +  Q+L++ D  + E +   + + K
Sbjct: 117 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +     +G  +G  FQ+ DDLLD   
Sbjct: 171 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218


>gi|229525127|ref|ZP_04414532.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae bv. albensis VL426]
 gi|229338708|gb|EEO03725.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae bv. albensis VL426]
 gi|327483290|gb|AEA77697.1| Octaprenyl-diphosphate synthase [Vibrio cholerae LMA3894-4]
          Length = 323

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|323704336|ref|ZP_08115915.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536402|gb|EGB26174.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 319

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 15/226 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
             ++E+ K+ID  +   +   +  ++   +D +       L GGK+IR  LV   A +  
Sbjct: 6   EFVKEDMKKIDEFILANVKTNSPTIKKAIDDLV-------LSGGKRIRPLLVIAIARMGE 58

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    + + A+IE +H  +LIHDD+  +D+  +RRG+ +V  +Y + TA+  G+ L + 
Sbjct: 59  YSEEKIIPIAASIEIMHMATLIHDDI--IDDSKMRRGQKSVQSKYGKETAVFTGDFLFSQ 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF +I+   ++    + ++ + ++            Q  +  +  +   +       KT 
Sbjct: 117 AFNLIADIISKENLKLIAKGVKAICEGEI------EQFDNRYNLDLSIKKYLKRIYRKTA 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L   +CESGA  A   +     +R FG  +G  FQ+ DD+LD E 
Sbjct: 171 LLFAISCESGASQAGLPKEMIRAMRHFGLEIGTAFQIVDDILDYEG 216


>gi|51473666|ref|YP_067423.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
 gi|51459978|gb|AAU03941.1| octaprenyl-diphosphate synthase [Rickettsia typhi str. Wilmington]
          Length = 327

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 16/226 (7%)

Query: 8   KLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           K+Q++ K   T L+DL+   L++ + +  +    LL A      GGK+IR  L    A +
Sbjct: 6   KIQQDLKEEVTQLNDLIISCLKSDTELIEKVGKYLLEA------GGKRIRPLLTIITAKM 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F+      +++ +A+E IH  +L+HDD+  +D+  +RR KPTV++ +   T+I+ G+ L 
Sbjct: 60  FDYKGDNHIKLASAVEFIHAATLLHDDV--VDDSTLRRFKPTVNVIWGSKTSILVGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + +F+++ +        I++  +L+    I  +G +   +   +   I   +   I K K
Sbjct: 118 SQSFKLMIASGC-----IKAMNVLARASVIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           T  L   ACE GAI+A       E ++ FG  LG IFQ+ DDLLD 
Sbjct: 173 TAELFGAACEVGAIIAEQVDRVSEDVQDFGMLLGTIFQVIDDLLDY 218


>gi|126445573|ref|YP_001062715.1| polyprenyl synthetase [Burkholderia pseudomallei 668]
 gi|126225064|gb|ABN88569.1| geranyltranstransferase [Burkholderia pseudomallei 668]
          Length = 322

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 77/230 (33%), Positives = 121/230 (52%), Gaps = 14/230 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVN 68
           +   ++ +  LD +L      +       L +A+RYA+ GG K++R  L      L + +
Sbjct: 34  KTAIRQTEATLDRILPCADGRLTA-----LHAAMRYAVFGGGKRLRPLLCHAAGELVDAS 88

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V A IE IH +SLI DDLP+MDN  +R G+ T+H QYD  TA++A +GL++ AF
Sbjct: 89  REALAQVSAVIEMIHVFSLIQDDLPAMDNDDLRHGRLTLHKQYDVATALLASDGLISQAF 148

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186
             +S     L  ++R  LM  L  +IG  G+ GGQ +D+      +D T++  + +MKTG
Sbjct: 149 LALSEAPLPL--DVRVALMRELASSIGPSGLTGGQYIDLTSIGAHLDRTELEQMHRMKTG 206

Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLADDLLDCEE 232
           AL+  A   G +       E       +  +GE LG+ +Q+ DD+LD   
Sbjct: 207 ALIRAAVRMGVLCGTVPGVELGAAWRAVSEYGERLGLAYQVVDDILDSTA 256


>gi|22124585|ref|NP_668008.1| octaprenyl diphosphate synthase [Yersinia pestis KIM 10]
 gi|45440424|ref|NP_991963.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806061|ref|YP_649977.1| octaprenyl diphosphate synthase [Yersinia pestis Antiqua]
 gi|108813417|ref|YP_649184.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
 gi|145600809|ref|YP_001164885.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides F]
 gi|153997290|ref|ZP_02022390.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125]
 gi|162421069|ref|YP_001608269.1| octaprenyl diphosphate synthase [Yersinia pestis Angola]
 gi|165928166|ref|ZP_02223998.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937469|ref|ZP_02226032.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166011293|ref|ZP_02232191.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166214028|ref|ZP_02240063.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167401227|ref|ZP_02306727.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167420704|ref|ZP_02312457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423704|ref|ZP_02315457.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167470490|ref|ZP_02335194.1| octaprenyl-diphosphate synthase [Yersinia pestis FV-1]
 gi|218930527|ref|YP_002348402.1| octaprenyl diphosphate synthase [Yersinia pestis CO92]
 gi|229839166|ref|ZP_04459325.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229896655|ref|ZP_04511822.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A]
 gi|229899730|ref|ZP_04514871.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903892|ref|ZP_04519005.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
 gi|270489119|ref|ZP_06206193.1| polyprenyl synthetase [Yersinia pestis KIM D27]
 gi|294505357|ref|YP_003569419.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003]
 gi|21957387|gb|AAM84259.1|AE013669_9 octaprenyl diphosphate synthase [Yersinia pestis KIM 10]
 gi|45435281|gb|AAS60840.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108777065|gb|ABG19584.1| octaprenyl-diphosphate synthase [Yersinia pestis Nepal516]
 gi|108777974|gb|ABG12032.1| octaprenyl-diphosphate synthase [Yersinia pestis Antiqua]
 gi|115349138|emb|CAL22101.1| octaprenyl-diphosphate synthase [Yersinia pestis CO92]
 gi|145212505|gb|ABP41912.1| octaprenyl-diphosphate synthase [Yersinia pestis Pestoides F]
 gi|149288927|gb|EDM39007.1| octaprenyl-diphosphate synthase [Yersinia pestis CA88-4125]
 gi|162353884|gb|ABX87832.1| octaprenyl-diphosphate synthase [Yersinia pestis Angola]
 gi|165914574|gb|EDR33188.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165919853|gb|EDR37154.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165989677|gb|EDR41978.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166204823|gb|EDR49303.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166961510|gb|EDR57531.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049252|gb|EDR60660.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057874|gb|EDR67620.1| octaprenyl-diphosphate synthase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229679662|gb|EEO75765.1| octaprenyl diphosphate synthase [Yersinia pestis Nepal516]
 gi|229687222|gb|EEO79297.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695532|gb|EEO85579.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229700433|gb|EEO88465.1| octaprenyl diphosphate synthase [Yersinia pestis Pestoides A]
 gi|262363422|gb|ACY60143.1| octaprenyl-diphosphate synthase [Yersinia pestis D106004]
 gi|262367203|gb|ACY63760.1| octaprenyl-diphosphate synthase [Yersinia pestis D182038]
 gi|270337623|gb|EFA48400.1| polyprenyl synthetase [Yersinia pestis KIM D27]
 gi|294355816|gb|ADE66157.1| octaprenyl-diphosphate synthase [Yersinia pestis Z176003]
 gi|320013717|gb|ADV97288.1| octaprenyl diphosphate synthase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 323

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMISVLVARALNYQGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTGLQS-----MRVLTLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S AI++ AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEESYMQVIYSKTARLFEAAAQSAAILSDASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   +
Sbjct: 215 DYSAE 219


>gi|187930136|ref|YP_001900623.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
 gi|187727026|gb|ACD28191.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
          Length = 325

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+ + +D ++   L      +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 9   LLAPVAEDMRAVDAVIRRRLGSEVV-LINQIGEYIVSA------GGKRLRPVILLLVANA 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 62  LGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTANAVFGNAASVLVGDFLY 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++    +     +R   +L+   NI  +G +  Q+L++ D  + E +   + + K
Sbjct: 120 SRAFQMMVQANS-----MRIMQILADATNIISEGEVL-QLLNMHDPDVTEERYLQVIRYK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +E    +G  +G  FQ+ DDLLD   
Sbjct: 174 TAKLFEAAAQIGAVLSDADAATEEAAAEYGRRIGTAFQIVDDLLDYTS 221


>gi|260878015|ref|ZP_05890370.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034]
 gi|260896382|ref|ZP_05904878.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466]
 gi|308085175|gb|EFO34870.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus Peru-466]
 gi|308090006|gb|EFO39701.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AN-5034]
 gi|328471899|gb|EGF42776.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 10329]
          Length = 323

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILQLMSNAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|254419553|ref|ZP_05033277.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
 gi|196185730|gb|EDX80706.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
          Length = 301

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 94/230 (40%), Positives = 133/230 (57%), Gaps = 6/230 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
            +  ++ E +  +   LD LL +           RL  A+RYA LG GK++R F   E A
Sbjct: 10  AVIDRVAEVADLVTVALDQLLPRADGP-----EARLTEAMRYAALGPGKRLRPFFALEAA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LFN++  + LR   A+EC+H YSL+HDDLP MD+  +RRG+PTVH  YDE TA++AG+ 
Sbjct: 65  RLFNIDERSVLRAACALECVHAYSLVHDDLPCMDDDDMRRGRPTVHRAYDEATAVLAGDA 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T AF+II    T     +R +L   L+   G +GM GGQM+D+     D   V  +Q+
Sbjct: 125 LQTAAFDIILHEDTHEDAVVRCELAARLSMASGARGMAGGQMIDLLGVRDDLGGVARMQR 184

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTGAL  +A E   I+A AS   +  L  F  ++G+ +Q+ DDLLD E 
Sbjct: 185 LKTGALFAYAFEIPLIIAEASAQHQHALISFAHDVGLAYQIVDDLLDAEG 234


>gi|229507073|ref|ZP_04396579.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae BX 330286]
 gi|229508772|ref|ZP_04398264.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae B33]
 gi|229519759|ref|ZP_04409202.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC9]
 gi|229519996|ref|ZP_04409425.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TM 11079-80]
 gi|229530278|ref|ZP_04419666.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae 12129(1)]
 gi|229606271|ref|YP_002876919.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae MJ-1236]
 gi|255743817|ref|ZP_05417774.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholera CIRS 101]
 gi|262167602|ref|ZP_06035306.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC27]
 gi|229332051|gb|EEN97539.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae 12129(1)]
 gi|229342945|gb|EEO07934.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae TM 11079-80]
 gi|229344448|gb|EEO09423.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC9]
 gi|229354175|gb|EEO19106.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae B33]
 gi|229355818|gb|EEO20738.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae BX 330286]
 gi|229368926|gb|ACQ59349.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae MJ-1236]
 gi|255738566|gb|EET93954.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholera CIRS 101]
 gi|262023938|gb|EEY42635.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae RC27]
          Length = 323

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|259501558|ref|ZP_05744460.1| geranyltranstransferase [Lactobacillus iners DSM 13335]
 gi|302191468|ref|ZP_07267722.1| geranyltranstransferase [Lactobacillus iners AB-1]
 gi|309804209|ref|ZP_07698286.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d]
 gi|309806895|ref|ZP_07700881.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b]
 gi|309808828|ref|ZP_07702713.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a]
 gi|312874432|ref|ZP_07734462.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d]
 gi|325911777|ref|ZP_08174181.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D]
 gi|329919888|ref|ZP_08276826.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G]
 gi|259167076|gb|EEW51571.1| geranyltranstransferase [Lactobacillus iners DSM 13335]
 gi|308163612|gb|EFO65882.1| polyprenyl synthetase [Lactobacillus iners LactinV 11V1-d]
 gi|308166713|gb|EFO68906.1| polyprenyl synthetase [Lactobacillus iners LactinV 03V1-b]
 gi|308167954|gb|EFO70087.1| polyprenyl synthetase [Lactobacillus iners LactinV 01V1-a]
 gi|311090044|gb|EFQ48458.1| polyprenyl synthetase [Lactobacillus iners LEAF 2052A-d]
 gi|325476283|gb|EGC79445.1| polyprenyl synthetase [Lactobacillus iners UPII 143-D]
 gi|328936978|gb|EGG33408.1| polyprenyl synthetase [Lactobacillus iners SPIN 1401G]
          Length = 288

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 22/236 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
              +I++ L + L  T       ++ +    + Y+ L GGK++R  L      + +    
Sbjct: 10  YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    +
Sbjct: 64  EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
            I+            +L+  +T  IG  GM GGQ +DI          +ET +  ++ +K
Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           TG L+  + +  A  A++S   +  L  F E  G  +Q+ DD++D  +      KK
Sbjct: 178 TGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233


>gi|288926232|ref|ZP_06420158.1| polyprenyl synthetase [Prevotella buccae D17]
 gi|288337011|gb|EFC75371.1| polyprenyl synthetase [Prevotella buccae D17]
          Length = 323

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 20/228 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            E  + I+  LD L          +    L + I+Y L +GGK+IR  L+    +LF  +
Sbjct: 5   DELLQLINRYLDSL-------PYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDD 57

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L    A+E  H Y+L+HDDL  MDN  +RRG+PTVH +++   A+++G+ +L  A+
Sbjct: 58  PEKILSSACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAY 115

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKT 185
           + ++   + L + +R               +  GQ +D++ E  +   E +   + ++KT
Sbjct: 116 QRMTECDSHLAEVLRL-------FTETALEIGEGQQMDMEFETRNDVREEEYIEMIRLKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L+  A + GA++A A  ++ + L  FGE +G+ FQL DD LD   D
Sbjct: 169 SVLLACAMKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGD 216


>gi|126741029|ref|ZP_01756712.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6]
 gi|126717955|gb|EBA14674.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. SK209-2-6]
          Length = 293

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 92/237 (38%), Positives = 132/237 (55%), Gaps = 19/237 (8%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           G  S L+ +   I   L++ L            D L  A+RYAL GGK +R FLV E A 
Sbjct: 10  GFASALKASQSMISAHLENRLA---------GEDNLHQAMRYALKGGKMLRGFLVLESAR 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  V+   AL    AIEC+H YSL HDDLP MD+  +RRG+PT+H ++DE  A++AG+ L
Sbjct: 61  LHGVSQKVALDAALAIECLHAYSLAHDDLPCMDDDDLRRGQPTLHRKWDEAMAVLAGDSL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179
             +AFE++S+P          + +     + G  GM+ GQMLDI  E     +   Q+ +
Sbjct: 121 QCFAFELLSNPDMGPNALSLIRDL---AKSAGKDGMVSGQMLDIAAETAETPLTLEQISL 177

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +Q  KTG L+ ++  +GA++A A       LR +   LG+ FQ+ADD+LD E D+ K
Sbjct: 178 LQARKTGCLIEWSASAGAVLAGADST---PLRQYATALGLAFQIADDILDVEGDVQK 231


>gi|297580574|ref|ZP_06942500.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385]
 gi|297534990|gb|EFH73825.1| octaprenyl-diphosphate synthase [Vibrio cholerae RC385]
          Length = 348

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 68  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239

Query: 229 DCEED 233
           D   D
Sbjct: 240 DYTSD 244


>gi|157368719|ref|YP_001476708.1| octaprenyl diphosphate synthase [Serratia proteamaculans 568]
 gi|157320483|gb|ABV39580.1| Polyprenyl synthetase [Serratia proteamaculans 568]
          Length = 323

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAARALHYQGDKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S ++     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSLES-----LRVLALMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A +S AI++ AS  E++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAAAQSSAILSDASVAEEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|109900040|ref|YP_663295.1| trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c]
 gi|109702321|gb|ABG42241.1| Trans-hexaprenyltranstransferase [Pseudoalteromonas atlantica T6c]
          Length = 323

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   N+       + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ +      D++R   +LS   N+  +G +  Q+++  
Sbjct: 101 EVFGNQASVLVGDFLYTRSFQMMVTL-----DSMRVMQILSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++   S+  +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIM 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYASDSE 221


>gi|138895788|ref|YP_001126241.1| heptaprenyl diphosphate synthase subunit II [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248670|ref|ZP_03147370.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           G11MC16]
 gi|134267301|gb|ABO67496.1| Component II of heptaprenyl diphosphate synthase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211546|gb|EDY06305.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           G11MC16]
          Length = 320

 Score =  187 bits (476), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 8/225 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     +   L  +  +    +Q+++     +A+     GGK+IR   V   A   + 
Sbjct: 2   KLKAMYSFLSKDLAAVEQELERTVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGHY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+  ++    A+  G+ L   +
Sbjct: 62  DLERIKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++       D+ R+  +L+ T     +G +  Q+ D               + KT  
Sbjct: 120 LERMAEL-----DDPRAHQVLAKTIVEVCRGEIE-QIKDKYWFEQPLRTYLRRIRRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C+ GA+ A A ++  +RL  FG  +G+ FQ+ DD+LD   
Sbjct: 174 LIAASCQLGALAAGAPESVAKRLYWFGHYVGMSFQITDDILDFTG 218


>gi|83942134|ref|ZP_00954596.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36]
 gi|83847954|gb|EAP85829.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp. EE-36]
          Length = 312

 Score =  187 bits (476), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 89/218 (40%), Positives = 130/218 (59%), Gaps = 9/218 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           DL +    H     +  +  A+RYA+ GGK +R+FLV E A L  V    A     AIE 
Sbjct: 37  DLAIGQILHGLDGLDGTVAEAMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEA 96

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSL+HDD+P MD+  +RRG+PTVH+++DE TA++AG+ L T AFE++++  T   D 
Sbjct: 97  LHAYSLVHDDMPCMDDDALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAA--TGCGDA 154

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGA 197
            R  L+  L    G++GM+GGQ +DI  E     +   Q+  +Q  KTGAL+ +A  +G 
Sbjct: 155 ERVALVTGLARAAGVRGMVGGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGP 214

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MA    ++   LR +  NLG+ FQ+ADD+LD E D  
Sbjct: 215 VMAG---DDAAALRSYARNLGLAFQIADDILDVEGDAA 249


>gi|217033990|ref|ZP_03439413.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10]
 gi|216943623|gb|EEC23071.1| hypothetical protein HP9810_883g60 [Helicobacter pylori 98-10]
          Length = 303

 Score =  187 bits (476), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 123/227 (54%), Gaps = 11/227 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS--FLVTECASLFNVNHLT---- 71
              +  L     H+++ H     +     L GGK+ R   FL   CA +   ++      
Sbjct: 14  ERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALMGKKDYSNQQTE 73

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++  +IEC+H YSLIHDDLP MDN  +RR  PT+H +YDE TA++ G+ L TY+FE++
Sbjct: 74  YFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELL 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALM 189
           S+  + L+ +I  +L+  L+ N G++GM+ GQ LD   E   ++  Q+  + + KT  L+
Sbjct: 134 SN--SLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLI 191

Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   G + +    +   + L+ FG  +G+ FQ+ DD++D  +D  
Sbjct: 192 SASLMMGLVASGIKDEGLFKWLQAFGLKMGLCFQVLDDIIDVTQDEE 238


>gi|153874225|ref|ZP_02002523.1| Polyprenyl synthetase [Beggiatoa sp. PS]
 gi|152069311|gb|EDN67477.1| Polyprenyl synthetase [Beggiatoa sp. PS]
          Length = 337

 Score =  187 bits (476), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 19/230 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIR-------YAL-LGGKKIRSFLVTECASLFNVNH 69
             ++ L+ Q    +      RL S +        Y +  GGK++R  L+   A  F    
Sbjct: 5   AAINTLINQDMRAVNVLIQKRLYSEVALVNQIGDYIVNSGGKRLRPMLLLLSARAFAYQG 64

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              + + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + AF+
Sbjct: 65  THHIDLAAIVEFIHTATLLHDDV--VDASLLRRGQETANNIWGNEASVLVGDFLYSRAFQ 122

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++        +N+R   +LS   N+  +G +  Q+L+  +    E     +   KT  L 
Sbjct: 123 MMVDI-----NNMRVMKILSEATNVMAEGEVL-QLLNCYEPDTTEMDYLRVICAKTAKLF 176

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             A + GA+++      ++ +  +G +LGI FQL DD LD     E+L K
Sbjct: 177 EAAAQLGAVISEQPSEYEKAMAMYGMHLGIAFQLIDDALDYNATMENLGK 226


>gi|312871899|ref|ZP_07731983.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a]
 gi|312872399|ref|ZP_07732468.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091981|gb|EFQ50356.1| polyprenyl synthetase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092621|gb|EFQ50981.1| polyprenyl synthetase [Lactobacillus iners LEAF 3008A-a]
          Length = 288

 Score =  187 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 22/236 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
              +I++ L + L  T       ++ +    + Y+ L GGK++R  L      + +    
Sbjct: 10  YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    +
Sbjct: 64  EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
            I+            +L+  +T  IG  GM GGQ +DI          +ET +  ++ +K
Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           TG L+  + +  A  A++S   +  L  F E  G  +Q+ DD++D  +      KK
Sbjct: 178 TGCLIVASVQMAAKYANSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233


>gi|52080783|ref|YP_079574.1| heptaprenyl diphosphate synthase component II [Bacillus
           licheniformis ATCC 14580]
 gi|52786153|ref|YP_091982.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
           licheniformis ATCC 14580]
 gi|319645260|ref|ZP_07999493.1| HepT protein [Bacillus sp. BT1B_CT2]
 gi|52003994|gb|AAU23936.1| heptaprenyl diphosphate synthase component II [Bacillus
           licheniformis ATCC 14580]
 gi|52348655|gb|AAU41289.1| HepT [Bacillus licheniformis ATCC 14580]
 gi|317393069|gb|EFV73863.1| HepT protein [Bacillus sp. BT1B_CT2]
          Length = 320

 Score =  187 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 21  DDLLLQTASHMQTQHND--RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           DD+ L      +T H+D   L  A  + L  GGK+IR   V         +      V  
Sbjct: 12  DDIELIEKELEKTVHSDYPLLSEASLHLLQAGGKRIRPVFVLLSGMFGEYDISKIKNVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           ++E IH  SL+HDD+  +D+  +RRG+PT+  ++D   A+  G+ L   + E ++     
Sbjct: 72  SLELIHMASLVHDDV--IDDAELRRGQPTIKAKWDNRIAMYTGDYLFARSLEAMTKI--- 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             +  ++  +LS        G +  Q+ D  +   +        + KT  L+  +C+ GA
Sbjct: 127 --NEPKAHEILSKAIVEVCLGEIE-QIKDKYNMEQNLRTYLRRIRRKTALLIASSCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I A A +N  + L  FG  +G+ +Q+ DD+LD      +L K
Sbjct: 184 IAAGAGENIHKTLYWFGYYVGMSYQIIDDILDFTSSEKELGK 225


>gi|269964673|ref|ZP_06178911.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B]
 gi|269830572|gb|EEZ84793.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 40B]
          Length = 323

 Score =  187 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSNAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|260773626|ref|ZP_05882542.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           metschnikovii CIP 69.14]
 gi|260612765|gb|EEX37968.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           metschnikovii CIP 69.14]
          Length = 323

 Score =  187 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSAKALGYQGEGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S + NI  +G +  Q+++  
Sbjct: 101 ATFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSHSVNIIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GA++  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPETTEESYMQVIYSKTARLFEAATQIGAMLCDASPEVERAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYTAD-GKE 222


>gi|291615993|ref|YP_003518735.1| IspB [Pantoea ananatis LMG 20103]
 gi|291151023|gb|ADD75607.1| IspB [Pantoea ananatis LMG 20103]
 gi|327396245|dbj|BAK13667.1| octaprenyl-diphosphate synthase IspB [Pantoea ananatis AJ13355]
          Length = 323

 Score =  187 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLSARAMGYQGDLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     +R   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSMGS-----LRILALMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|322378507|ref|ZP_08052957.1| geranyltranstransferase [Helicobacter suis HS1]
 gi|321149068|gb|EFX43518.1| geranyltranstransferase [Helicobacter suis HS1]
          Length = 296

 Score =  187 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 14/226 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAI 79
            L      +++ H     +     L GGK+ R  L+    S F  +H     A  +  A+
Sbjct: 19  YLKHAKPKLKSFHPTFEQAFWEMLLNGGKRFRPKLLLAVLSSFMRSHLMIKNAFPIALAL 78

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H YSLIHDDLP MDN  +RR  PT+H+ Y    A + G+GL TYAFE++SS +  L 
Sbjct: 79  EVLHTYSLIHDDLPCMDNAPLRRYHPTLHVSYGVTVATLVGDGLNTYAFELLSSAR--LP 136

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGA 197
           + ++  L+ +L H  G+ GM+ GQ +D   E       Q+ ++  +KT  L+  + + GA
Sbjct: 137 NALKVSLISTLAHCGGVFGMVLGQAIDCYFEHKPLLREQLEILHTLKTAKLIAASLKMGA 196

Query: 198 IMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++A        N    L  FG  LG+ FQ+ DD++D     E+  K
Sbjct: 197 LIAKKYARTPTNLPTTLFNFGLKLGLFFQVRDDIIDRTKSPEESGK 242


>gi|325680723|ref|ZP_08160261.1| polyprenyl synthetase [Ruminococcus albus 8]
 gi|324107503|gb|EGC01781.1| polyprenyl synthetase [Ruminococcus albus 8]
          Length = 297

 Score =  187 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 15/245 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M       ++  + ++D  L        +  + +    +L A+ Y+L  GGK++R  L+ 
Sbjct: 1   MTENNKLLMKAYADKVDEQLLKF-----TENKPELQGVVLEAMEYSLTAGGKRLRPMLML 55

Query: 60  ECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           E   +    +    L++  ++E IH YSLIHDDLP MD+   RRGKP+ H  + E  A++
Sbjct: 56  EFYRMCGGEDLDKMLKLACSVELIHTYSLIHDDLPCMDDDDYRRGKPSCHKAFPENIALL 115

Query: 119 AGNGLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDE 174
           AG+ L T AFE+IS    +  +  +    L+  L+  IG  GM+GGQ++D   ++E I  
Sbjct: 116 AGDALNTLAFEVISECAMEGTISADKAVMLISVLSKAIGTDGMIGGQVIDLQTENEEISI 175

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-- 232
             +  +Q  KTGAL+  AC  G I A    +       + + +G  FQ+ DD+LD     
Sbjct: 176 ETLNTLQSCKTGALIEAACVMGVIAAG-RLDLIPAAADYAQAMGRAFQIVDDILDVTGTF 234

Query: 233 -DLPK 236
            +L K
Sbjct: 235 EELGK 239


>gi|294625513|ref|ZP_06704141.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600182|gb|EFF44291.1| farnesyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 291

 Score =  187 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M+  L  +    ++R         L+      T    RL +A+R+A+LGG K++R  LV 
Sbjct: 1   MSSALFDRWIARTER--------SLEAGLPSATHAPQRLHAAMRHAVLGGGKRMRPLLVY 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +LF            A+E IH YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+A
Sbjct: 53  ASGALFGAAEDQLDTPAMAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILA 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L T AFE++++     +  +     L+               +D   +      +  
Sbjct: 113 GDALQTRAFELLATAPASAELRVGWMQSLANAAGAAGMCGGQALDIDATGQLQSLQHLQR 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +KTGAL+  A   GA+   A+  +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 173 MHALKTGALIRAAVRMGALTGGAAAADQQRLDEFADALGLAFQVRDDILDVES 225


>gi|326423749|ref|NP_759657.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
 gi|319999111|gb|AAO09184.2| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
          Length = 333

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 53  GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   NI  +G +  Q+++  
Sbjct: 111 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNIIAEGEVL-QLMNCN 164

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A    +  L+ +G+ LG  FQL DD++
Sbjct: 165 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 224

Query: 229 DCEED 233
           D   D
Sbjct: 225 DYTSD 229


>gi|119502847|ref|ZP_01624932.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
 gi|119461193|gb|EAW42283.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
          Length = 280

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 85/201 (42%), Positives = 122/201 (60%), Gaps = 5/201 (2%)

Query: 36  NDRLLSAIRYALLG-GKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           + RL +A++Y L   GKK+R+ LV      L       A     AIE +H YSL+HDDLP
Sbjct: 15  DPRLAAALQYVLENSGKKLRARLVMASYHMLCEGADDAAASAATAIEWLHTYSLVHDDLP 74

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+  +RRGKPTVH  YDE TAI+ G+GL   AF +IS  + +L    R +L+  + + 
Sbjct: 75  AMDDDALRRGKPTVHTVYDEATAILIGDGLQAAAFSLISEDE-RLASGTRLKLITLIANA 133

Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +G  GM+GGQ LD+  Q +     Q+ +I + KTGAL   A  SGA+ A+A++ + +RL 
Sbjct: 134 VGFNGMVGGQALDMAAQGKASTFEQLRLIHEQKTGALFRAAVLSGAVCANATEQDIQRLD 193

Query: 212 CFGENLGIIFQLADDLLDCEE 232
            F   +G+ FQ+ADD+LD  E
Sbjct: 194 QFASTIGLAFQVADDILDVTE 214


>gi|32265833|ref|NP_859865.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449]
 gi|32261882|gb|AAP76931.1| geranyltranstransferase [Helicobacter hepaticus ATCC 51449]
          Length = 288

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 83/224 (37%), Positives = 122/224 (54%), Gaps = 14/224 (6%)

Query: 16  IDTILDDL---LLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASLFNVN- 68
           I  IL+D    L+  A  + + H      +   ++    GGK+ R  LV    +      
Sbjct: 3   ISQILNDFESFLISQAPQIPSFHPHYEQAVWEMMK---NGGKRFRPALVFCVVNALAPQL 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     +IECIH YSLIHDDLP MDN  +RRG  T+H +YDE  A++ G+GL TYAF
Sbjct: 60  IKNAFLPALSIECIHTYSLIHDDLPCMDNAPLRRGHATLHTKYDETLALLVGDGLNTYAF 119

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186
            ++S  +  L   +R +L+ SL  N G+ GM+ GQMLD   +D+ +   ++ +I   KT 
Sbjct: 120 ALLSQAR--LDAQVRLELIHSLALNAGIGGMVLGQMLDCAFEDKKLSLQELQIIHTNKTA 177

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            L+  + + GAI+++A  +    +  FG  LGI FQL DDL+D 
Sbjct: 178 KLIATSLQFGAIISNAKAHFASSIYEFGLKLGIYFQLRDDLIDA 221


>gi|332977217|gb|EGK14013.1| heptaprenyl diphosphate synthase [Desmospora sp. 8437]
          Length = 323

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 8/227 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL +    +   L ++  +    ++T H D   SA      GGK++R   V         
Sbjct: 2   KLADIYNSLKQDLREVERELEKSIRTDHRDLNRSAAHLLEAGGKRMRPVFVLLSGKFGEY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +     +V   +E IH  +L+HDD+  +D+   RRG+PTV  ++D   A+  G+ +L  +
Sbjct: 62  DVDKLKQVAVPLELIHMATLVHDDV--IDDASTRRGRPTVKAKWDNRVAMYTGDYILGRS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             I+S       ++ +   +LS       +G +  Q+ D         +     K KT  
Sbjct: 120 LAIVSQI-----EDPKIHRVLSPAIYQMCRGEIE-QIRDFFATDPSLIRYLHRIKRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           LM  +CE GA+++ A+  E  RLR FG  +G+ FQ+ DD+LD   D 
Sbjct: 174 LMSVSCELGALVSGAAPAEVRRLRLFGYFVGMAFQITDDILDLTGDE 220


>gi|258627044|ref|ZP_05721842.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603]
 gi|258580718|gb|EEW05669.1| octaprenyl-diphosphate synthase [Vibrio mimicus VM603]
          Length = 348

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 68  GGKRLRPLLAVLSAKALGYHGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 125

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 126 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 180 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 239

Query: 229 DCEED 233
           D   D
Sbjct: 240 DYTSD 244


>gi|119356223|ref|YP_910867.1| polyprenyl synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119353572|gb|ABL64443.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Chlorobium phaeobacteroides DSM 266]
          Length = 332

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 16/241 (6%)

Query: 1   MNGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLV 58
           MN  +  +L E   R+   ++++ L   AS    +    L +  +Y L G GK+IR FL 
Sbjct: 1   MNMSITQELVEKKYRLYHNLINEAL---ASCFSAEAPVTLYAPAKYILDGKGKRIRPFLT 57

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              +     +   AL+V  A+E +H ++L+HDD+  MD   +R G+PTVH Q++   AI+
Sbjct: 58  LLASEAVCGSSEHALKVALAVEILHNFTLMHDDI--MDQAELRHGRPTVHKQWNANVAIL 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDET 175
           +G+ ++ YA+E+     +        Q+ L    N     +  GQ LDI+ E        
Sbjct: 116 SGDMMIAYAYELALQSPSSR------QIELVHILNDANITICEGQALDIELEEKKHATIA 169

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
               +   K+G L+  A E+G +  +A+  +   L  FGE +G  FQ+ DD LD   D  
Sbjct: 170 DYLDMIAKKSGRLISAALEAGGVAGNATDEQLNNLVTFGEKIGRAFQIQDDFLDIMADDG 229

Query: 236 K 236
           K
Sbjct: 230 K 230


>gi|296283988|ref|ZP_06861986.1| geranyltranstransferase [Citromicrobium bathyomarinum JL354]
          Length = 308

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 87/237 (36%), Positives = 131/237 (55%), Gaps = 8/237 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
             L   L      +D   D LL      +       L+ A+R+A + GGK++R  L+   
Sbjct: 15  ARLKMALATIRTDVDDAFDALLP-----VPGDTRAPLVEAMRHAAIGGGKRVRPLLLVAT 69

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A++  V+   A+  G A+E IH YSLIHDDLP MD+  +RRGKPTVH  +DE TA++AG+
Sbjct: 70  ATMLGVSREAAVLAGTAVESIHVYSLIHDDLPCMDDDDMRRGKPTVHKAFDEATAVLAGD 129

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
            L   AF+I++         I+++L+  L    G+ GM GGQ +D+       D   +  
Sbjct: 130 ALHALAFDILTDSSVSSDPFIQAELVRCLAQASGMSGMAGGQAMDMAADSATYDLPTITR 189

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +Q++KTGAL+  + E GAI+A    + +  L  +  ++G+ FQ+ADDLLD E D  K
Sbjct: 190 LQQLKTGALLTASVEMGAILARVPHDARGHLIAYARDIGLAFQIADDLLDHEGDEDK 246


>gi|212550849|ref|YP_002309166.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549087|dbj|BAG83755.1| geranylgeranyl pyrophosphate synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 321

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 14/211 (6%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            +    L   + Y L + GK+IR         LF  N   A+ V  A E  H ++L+HDD
Sbjct: 20  PKQPKELYEPMIYLLSMKGKRIRPIFTLMACRLFQENIKCAIDVALAWEIFHNFTLMHDD 79

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +DN ++RRG+ TVH ++++  A++AG+ +L  A++ I+    Q +D      +L   
Sbjct: 80  I--IDNAFLRRGQSTVHTKWNKTIALLAGDSMLILAYKYIAKSPLQYRD------ILLHL 131

Query: 152 HNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            +     +  GQ  D+  E    + + +   + ++KT  L+     SGAI+  AS  + +
Sbjct: 132 FSSIAAKVCEGQAYDMLLENRLDVRKKEYLELVRLKTATLLSACLYSGAIVGGASGQDAK 191

Query: 209 RLRCFGENLGIIFQLADDLLDCEED--LPKK 237
            L+ FG NLGI FQ+ DD+LD   +    K+
Sbjct: 192 FLQDFGINLGIAFQIQDDMLDVYGNSSFGKE 222


>gi|167044388|gb|ABZ09065.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote
           HF4000_APKG6D3]
          Length = 283

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 15/225 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L  K     K+I+ +LD       S ++          ++YAL GGK+IR  ++   +  
Sbjct: 11  LLEKYSAYIKKINNVLD-------SELELYTESEFKEPLKYALGGGKRIRPIILLLASEC 63

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   L    AIE +H  S+IHDD+  +DN  +RR K   HI+Y   T+++ G+ +L
Sbjct: 64  VGEIDDNTLAAACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNTSVLTGDFVL 121

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
                I S       +N R    L+ T  +  +G +    L+   E +       + + K
Sbjct: 122 GLILNIASRI-----NNPRVTKNLATTAMMMSEGEVIESRLE-ASEDVTFDDYLKVIEYK 175

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T      A   GAI++  ++ E E L  +G+N+GI +Q+ DDLLD
Sbjct: 176 TATAFETASRLGAIISGGTEEEIESLADYGKNIGIAYQIRDDLLD 220


>gi|153217175|ref|ZP_01950939.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587]
 gi|124113799|gb|EAY32619.1| octaprenyl-diphosphate synthase [Vibrio cholerae 1587]
          Length = 282

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 2   GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 59

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 60  AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 113

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 114 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVM 173

Query: 229 DCEED 233
           D   D
Sbjct: 174 DYTSD 178


>gi|312962998|ref|ZP_07777484.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6]
 gi|311282767|gb|EFQ61362.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens WH6]
          Length = 322

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRETA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  +
Sbjct: 100 NAMWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMKILSQATRIIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +  AS  + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCGASAEQAEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|317046711|ref|YP_004114359.1| polyprenyl synthetase [Pantoea sp. At-9b]
 gi|316948328|gb|ADU67803.1| Polyprenyl synthetase [Pantoea sp. At-9b]
          Length = 323

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLSARALNYQGSQHITNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSMGS-----LKILALMSEAVNVIAEGEVL-QLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI+A A+  +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPDITEENYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYIGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|119945899|ref|YP_943579.1| geranyltranstransferase [Psychromonas ingrahamii 37]
 gi|119864503|gb|ABM03980.1| farnesyl-diphosphate synthase [Psychromonas ingrahamii 37]
          Length = 296

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 82/233 (35%), Positives = 129/233 (55%), Gaps = 9/233 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
           L   L +  +R+D  L+  +  T        +  L  A+ Y ALLGGK++R FLV     
Sbjct: 4   LAETLNQYQQRVDKNLNKYINITHPI-----SPLLNEAMGYGALLGGKRVRPFLVYAVGD 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +  +   + AA+ECIH YSLIHDDLP+MD+  +RRG+ T H ++DE TAI+AG+ L
Sbjct: 59  MLGCSLQSLDPLAAAVECIHAYSLIHDDLPAMDDDDLRRGQMTCHKKFDEATAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
            T AF+IIS P   +    + +++  L    G  GM  GQ LD   +++ ++   +  I 
Sbjct: 119 QTLAFDIISMPNKAITAQAQLKMVNFLAKAAGDHGMCAGQALDLVAENQSVNLVTLQKIH 178

Query: 182 KMKTGALMCFACESGAIM-AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KTGAL+  A +  A+  +   ++  + L  F + +G+ FQ+ DD+LD   D
Sbjct: 179 QAKTGALIKVAIQLAAMTKSDLHEDHFQLLNTFADAIGLAFQVQDDILDIIGD 231


>gi|304394308|ref|ZP_07376231.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130]
 gi|303293748|gb|EFL88125.1| hypothetical protein R2A130_1942 [Ahrensia sp. R2A130]
          Length = 300

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 98/237 (41%), Positives = 151/237 (63%), Gaps = 5/237 (2%)

Query: 3   GGLPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
             L  ++ + +  ++  LD +L   +A+  + Q  +RL++A+R+  L GGK++R FLV E
Sbjct: 2   ADLKLQMAKIADAVNGWLDVELNADSAAEGERQRPERLVAAMRHGVLNGGKRVRPFLVVE 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A+LF V+   AL    A+EC+H +SL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG
Sbjct: 62  SAALFGVSLDDALPTACALECLHSFSLVHDDLPAMDDDDLRRGQPTVHKAFDEALAILAG 121

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVF 178
           + L T AF+I++S ++     +R +L   L    G  GM+GGQ+LDI+ E     + ++ 
Sbjct: 122 DALSTLAFDILAS-RSSADAAVRCELTTMLARASGWGGMIGGQVLDIEAEDGAPTDAEIR 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +Q MKTGAL+ FACE+GA++  A    +  LR +GE +G+ FQLADD+LD   D  
Sbjct: 181 TLQAMKTGALIRFACEAGAVLGGADDAARAALRSYGETVGLAFQLADDILDVTADTA 237


>gi|258544867|ref|ZP_05705101.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC
           15826]
 gi|258519890|gb|EEV88749.1| octaprenyl-diphosphate synthase [Cardiobacterium hominis ATCC
           15826]
          Length = 326

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 10/212 (4%)

Query: 26  QTASHMQTQHNDRLLS-AIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           +     + Q    L    ++YA+  GGK+ R  L      L +     A+   A IE IH
Sbjct: 22  EALMRAEMQSEVPLAELVMQYAIGDGGKRFRPLLTLLSCGLCDYRGEHAITAAAFIEFIH 81

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             +L+HDD+  +D   +RRGKP+ +I +    +++ G+ L T AF+++            
Sbjct: 82  NATLLHDDV--VDESALRRGKPSANIAFGNAASVLVGDFLYTRAFQLMVRTGNSA----- 134

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
              M++   N+   G +  Q+ ++ D  +DE + + + ++KT  L   AC++  ++A   
Sbjct: 135 VIAMMADAVNLIAAGEVM-QLGNMHDPDVDEPRYYRVIELKTAVLFAAACKTAGLLAGLP 193

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   E+L  +G  LG+ FQ+ DDLLD   D  
Sbjct: 194 EARSEQLAVYGRKLGMAFQIMDDLLDYTGDEA 225


>gi|167630030|ref|YP_001680529.1| heptaprenyl diphosphate synthase component ii, putative
           [Heliobacterium modesticaldum Ice1]
 gi|167592770|gb|ABZ84518.1| heptaprenyl diphosphate synthase component ii, putative
           [Heliobacterium modesticaldum Ice1]
          Length = 320

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 15/235 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L  ++Q +  +++  L   +  +   +    +  L +       GGK++R   V  
Sbjct: 1   MQFQLFHEIQADLAKVEAELQKYVDTSLPTLTAASSHLLHA-------GGKRLRPAFVLL 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                N      L +  A+E IH  +L+HDD+  +D    RRG PTV  ++    ++  G
Sbjct: 54  AGKFHNYALERLLPLAVALELIHMATLVHDDV--VDESKTRRGIPTVRARWGNRISLHTG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   +  +IS         + +++ + +            QM    D           
Sbjct: 112 DHLFARSLLLISELNDPAMTAVLAKISVEMCEGEI------QQMEATYDVHQTFRDYLYR 165

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            K KT  L+  +C+ GA+   A  +    L+ +G +LG+ FQ+ DD+LD   D  
Sbjct: 166 IKRKTALLIAASCQLGAMAVKADPSAVRALKMYGHHLGMAFQITDDILDMTADEK 220


>gi|323489688|ref|ZP_08094915.1| heptaprenyl diphosphate synthase component II [Planococcus
           donghaensis MPA1U2]
 gi|323396819|gb|EGA89638.1| heptaprenyl diphosphate synthase component II [Planococcus
           donghaensis MPA1U2]
          Length = 324

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S L+   + I+  L+  +  + S +    +  LL A      GGK+IR   V      
Sbjct: 9   LYSDLKPELEMIEKELEQAV-DSKSLLLNDASLHLLQA------GGKRIRPVFVLLAGKF 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            N N     +V   +E IH  SL+HDD+  +D+  IRRG+PTV  Q++   A+  G+ +L
Sbjct: 62  GNYNVDVMKQVAVPLELIHMASLVHDDV--IDDSEIRRGQPTVKAQWNNSVAMYTGDFIL 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A E I+  ++     I S+ ++ +     +      Q+ D      +    F   K K
Sbjct: 120 ARALEHITEIESPRVHEILSKTLIEVCRGEII------QIQDKYRLDQNLRDYFRRIKRK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           T  L+  +CE GA+++   +     LR FG  +G+ FQ+ DD+LD     E+L K
Sbjct: 174 TALLISSSCELGALVSGTDEKTAAHLRRFGYFIGMSFQIIDDILDFTSTDEELGK 228


>gi|257083890|ref|ZP_05578251.1| geranyltranstransferase [Enterococcus faecalis Fly1]
 gi|256991920|gb|EEU79222.1| geranyltranstransferase [Enterococcus faecalis Fly1]
          Length = 293

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 133/235 (56%), Gaps = 15/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q++   ++ ++   + +         N+RL  A+ Y++  GGK++R  LV    + F   
Sbjct: 6   QQHLPLVEKVMVAFIAEY------TENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKE 59

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             T   +V A++E IH YSLIHDDLP+MD+  +RRGKPT H  + E TAI+AG+GLLT A
Sbjct: 60  METQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           F+++S  +  L + +     L      G QGM+ GQM DI+ E   +   ++  + + KT
Sbjct: 120 FQLLSLSQLGLSEKVLLMQQL--AKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GAL+ FA  +G ++A+ ++     L  F  + G+ FQ+ DDLLD    E DL KK
Sbjct: 178 GALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKK 232


>gi|78357244|ref|YP_388693.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219649|gb|ABB38998.1| farnesyl-diphosphate synthase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 304

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 129/236 (54%), Gaps = 10/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            +  +L   +  ++  L   L              LL A+ Y+LL GGK++R  L    A
Sbjct: 11  AMKQRLAAEALEVEAYLGGCLKGRGIPCD------LLKAMDYSLLAGGKRLRPVLCLTTA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF +     L   AAIE IH YSL+HDDLP+MD+  +RRG P+ H ++ E TAI+AG+G
Sbjct: 65  GLFGLARDAVLPFAAAIELIHTYSLVHDDLPAMDDDDLRRGMPSNHKKFGEATAILAGDG 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM--- 179
           LLT AF +++S    ++ +     +  +    G  GM+GGQMLD++     +  + M   
Sbjct: 125 LLTEAFCLMASAGAAVEASRVLSALSVVAAAAGAGGMVGGQMLDMEYTGRADVSLDMLRG 184

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  MKTGAL+  +C +GA++A A   + ER+  +GE +G  FQ+ DD+LD   D  
Sbjct: 185 MHAMKTGALIRCSCLAGALLAGAPHEDAERISHYGEAIGAAFQIVDDILDETGDEA 240


>gi|83746515|ref|ZP_00943566.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
           pyrophosphate synthetase [Ralstonia solanacearum UW551]
 gi|207743826|ref|YP_002260218.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Ralstonia solanacearum IPO1609]
 gi|83726846|gb|EAP73973.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
           pyrophosphate synthetase [Ralstonia solanacearum UW551]
 gi|206595226|emb|CAQ62153.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Ralstonia solanacearum IPO1609]
          Length = 299

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 123/236 (52%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +     R ++ L+  L       ++    RL +A+RYA LG GK++R  LV   
Sbjct: 2   SDFAQWMASIVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L   +     RV  A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GALGEASPEALDRVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L T AF +++     +    R+ L+  L    G  GM GGQ +D+Q     + +  +  
Sbjct: 117 ALQTQAFVVLAELGA-VSPVTRAALVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+ A  +    E++  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231


>gi|262403940|ref|ZP_06080497.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC586]
 gi|262349902|gb|EEY99038.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC586]
          Length = 323

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----LKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASSEVELAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|262392448|ref|YP_003284302.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           Ex25]
 gi|262336042|gb|ACY49837.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           Ex25]
          Length = 323

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSNAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|241663625|ref|YP_002981985.1| polyprenyl synthetase [Ralstonia pickettii 12D]
 gi|240865652|gb|ACS63313.1| Polyprenyl synthetase [Ralstonia pickettii 12D]
          Length = 303

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 79/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +     R ++ LD  L       +T    RL +A+RYA LG GK++R  L    
Sbjct: 2   SDFAQWMASVVARTESALDRALPP-----ETVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L + +      V  A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GALGDASPAALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L T AF +++     +    R+QL+  L    G  GM GGQ +D+Q     + +  +  
Sbjct: 117 ALQTQAFILLAELGA-VSAPTRAQLVGELARASGSLGMAGGQAIDLQSVGVALSQDALEA 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+ A  +    E +  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASLRMGALCAGLNAAALEHVDTYAGAVGLAFQVVDDILDVTADTA 231


>gi|254230032|ref|ZP_04923431.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
 gi|151937420|gb|EDN56279.1| polyprenyl synthetase superfamily [Vibrio sp. Ex25]
          Length = 287

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 7   GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 64

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 65  AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSNAVNVIAEGEV-QQLMNCN 118

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A ++ +  ++ +G+ LG  FQL DD++
Sbjct: 119 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEHVEIAMQNYGKYLGTAFQLIDDVM 178

Query: 229 DCEED 233
           D   D
Sbjct: 179 DYTSD 183


>gi|124494325|gb|ABN13218.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494345|gb|ABN13237.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|124494365|gb|ABN13256.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494405|gb|ABN13294.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
          Length = 348

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +            L  A  + L  GGK+IR   V       + +      V   +E
Sbjct: 43  DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 102

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++        
Sbjct: 103 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 160

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I SQ ++ +            Q+ D  +   +        K KT  L+  +C+ GAI +
Sbjct: 161 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 214

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253


>gi|323701812|ref|ZP_08113482.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533116|gb|EGB22985.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 320

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 18/236 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
              S ++E+   +++ +  ++ Q+   + T+ + +LL+A      GGK++R         
Sbjct: 3   DFFSLIREDLGMVESEIRKVV-QSRDSLLTKTSLQLLNA------GGKRLRPAFALLAGR 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L++ +    + +  A+E IH  +L+HDD+  +D+   RRG PTV   +    ++  G+ L
Sbjct: 56  LYDADVEKLIPLAVALELIHMATLVHDDV--VDDSMTRRGTPTVKANWGNKISMHTGDYL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +  +IS+ K  L   + ++  + +            Q+             F   + 
Sbjct: 114 FAKSLVLISTYKEPLIAELLAKTSVKMCEGEIH------QISTAYSANQSWRDYFYRIER 167

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           KT  L+  +C+ GA+ A A   + +RL  FG  LG+ FQ+ DD+LD   D   L K
Sbjct: 168 KTALLIAASCQLGAVAAGAPAKDHKRLGKFGHQLGMAFQITDDILDMVADQRELGK 223


>gi|16079331|ref|NP_390155.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|399776|sp|P31114|HEPS2_BACSU RecName: Full=Heptaprenyl diphosphate synthase component 2;
           Short=HEPPP synthase subunit 2; AltName: Full=Spore
           germination protein C3
 gi|143803|gb|AAA20856.1| GerC3 [Bacillus subtilis]
 gi|2634692|emb|CAB14190.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|124494285|gb|ABN13180.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|124494305|gb|ABN13199.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494385|gb|ABN13275.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494445|gb|ABN13332.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. SMY]
          Length = 348

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +            L  A  + L  GGK+IR   V       + +      V   +E
Sbjct: 43  DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 102

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++        
Sbjct: 103 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 160

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I SQ ++ +            Q+ D  +   +        K KT  L+  +C+ GAI +
Sbjct: 161 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 214

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253


>gi|220936362|ref|YP_002515261.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997672|gb|ACL74274.1| octaprenyl-diphosphate synthase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 322

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A          + + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLVLLSARACGAGDRRHIDLAAIIEFIHTATLLHDDV--VDASELRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++    +     +R   +L+ T N   +G +  Q+L+  
Sbjct: 101 ALFGNEASVLVGDFLYSRSFEMMVEIGS-----MRVMEILAHTTNTIAEGEVL-QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   + + KT  L   A   GA++    ++ ++ +  +G +LG  FQL DD+L
Sbjct: 155 DADTPEERYMEVIQSKTAKLFEAAARIGAVLGGQPESVEQAMAAYGMHLGTAFQLIDDVL 214

Query: 229 DC---EEDLPK 236
           D     E++ K
Sbjct: 215 DYGASAEEMGK 225


>gi|320157514|ref|YP_004189893.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e [Vibrio vulnificus MO6-24/O]
 gi|319932826|gb|ADV87690.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase [Vibrio
           vulnificus MO6-24/O]
          Length = 323

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAVLSARALGYQGNAHTTAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   NI  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNIIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A    +  L+ +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFEAATQIGAILNDAPAEVETALQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|315452919|ref|YP_004073189.1| geranyltranstransferase [Helicobacter felis ATCC 49179]
 gi|315131971|emb|CBY82599.1| geranyltranstransferase [Helicobacter felis ATCC 49179]
          Length = 296

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 9/222 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LR 74
              ++ L +    + T H     +       GGK+ R  L       F     T      
Sbjct: 16  EAFEEYLHKAKPRLDTFHPFFEKAFWEMLENGGKRFRPKLFLAVLCAFEEKIETIHACFP 75

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +  A+E +H YSLIHDDLP MDN   RR  PT+H  YDE TA + G+GL TYAFE++++ 
Sbjct: 76  IALALEVLHTYSLIHDDLPCMDNADTRRYHPTLHKSYDETTATLVGDGLNTYAFELLAT- 134

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
              L D ++  L+ +L    G+ GM+ GQ LD   E   ++  Q+  +  +KT  L+  +
Sbjct: 135 -NSLPDRLKISLITTLAQCGGIGGMVLGQALDCHFEHQTLNLQQLETLHTLKTAKLIAAS 193

Query: 193 CESGAIMAHAS--QNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + GA++   S   +    L  FG  LG+ FQ+ DD++D  +
Sbjct: 194 LKMGALIVCDSLETDISHSLFTFGLKLGLFFQVRDDIIDRTQ 235


>gi|78187619|ref|YP_375662.1| geranyltranstransferase [Chlorobium luteolum DSM 273]
 gi|78167521|gb|ABB24619.1| farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase
           [Chlorobium luteolum DSM 273]
          Length = 330

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           +  K +   KRI+  L        +         L +  RY L G GK+IR FL    + 
Sbjct: 8   VEQKYRAYHKRINDAL-------GACFSATTPATLYAPARYILEGKGKRIRPFLTLLASE 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             + N   AL+V  A+E +H ++L+HDD+  MD   +R  +PTVH +++   AI++G+ +
Sbjct: 61  AVSGNSENALKVALAVEVLHNFTLMHDDI--MDEAELRHNRPTVHREWNANVAILSGDMM 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMI 180
           + YA+E+    ++           L    N     +  GQ LD++ E            +
Sbjct: 119 IAYAYELALEAESHR------HCELIHILNHANITICEGQALDMELEEKQDATIADYLDM 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTG L+  A E+G + A A++ + + L  FGE +G  FQ+ DD LD   +  K
Sbjct: 173 ISKKTGRLISAALEAGGVSADATREQLQSLVLFGEKIGRAFQIQDDYLDIMAEDGK 228


>gi|78048472|ref|YP_364647.1| geranyltranstransferase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78036902|emb|CAJ24595.1| Geranyltranstransferase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 291

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 1/209 (0%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+      T    RL +A+R+A+LGG K++R  LV    +LF            A+E IH
Sbjct: 17  LEAGLPRATHAPQRLHAAMRHAVLGGGKRMRPLLVYASGALFGAAEDQLDTPAVAVELIH 76

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            YSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ L T AFE++++     +  + 
Sbjct: 77  AYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTRAFELLATASASAELRVS 136

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               L+               +D   +      +  +  +KTGAL+  A   GA+   A+
Sbjct: 137 WIQSLATAAGAAGMCGGQALDIDATGQLQSLQDLQRMHALKTGALIRAAVRMGALTGGAA 196

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +++RL  F + LG+ FQ+ DD+LD E 
Sbjct: 197 AADQQRLDEFADALGLAFQVRDDILDVES 225


>gi|90020654|ref|YP_526481.1| phage tail region protein [Saccharophagus degradans 2-40]
 gi|89950254|gb|ABD80269.1| Trans-hexaprenyltranstransferase [Saccharophagus degradans 2-40]
          Length = 320

 Score =  186 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 12/197 (6%)

Query: 44  RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y +  GGK++R  LV   A     N    L + A IE IH  +L+HDD+  +D   +RR
Sbjct: 35  HYIVDAGGKRLRPLLVLLTARALGYNGNQHLSLSAIIEFIHTATLLHDDV--VDVSALRR 92

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+PT +  +    +++ G+ L + AF+++          +     L+ T N+  +G +  
Sbjct: 93  GRPTANANWGNAPSVLVGDFLYSRAFQMMVEIG-----EMGIMKELANTTNVISEGEV-Q 146

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+++ ++  + E     +   KT AL   ACE+ AI+A A     + +R +G +LG+ FQ
Sbjct: 147 QLVNARNPEVTEQNYMTVIHKKTAALFEAACETAAILAGADAATCKAVRSYGYHLGVAFQ 206

Query: 223 LADDLLDCEED---LPK 236
           L DD+LD + D   L K
Sbjct: 207 LVDDVLDYQGDAEELGK 223


>gi|71278535|ref|YP_271161.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H]
 gi|71144275|gb|AAZ24748.1| octaprenyl-diphosphate synthase [Colwellia psychrerythraea 34H]
          Length = 327

 Score =  186 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A  F       L + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEFIHTATLLHDDV--VDESNMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++        ++R   +LS   NI  +G +  Q+++  
Sbjct: 105 ALFGNSASVLVGDFLYTRSFQMMTKLG-----DMRIMDILSEATNIVAEGEVL-QLMNCN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A      ++ +  +G+ LG  FQL DD++
Sbjct: 159 DASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGTAFQLVDDIM 218

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 219 DYTADAK 225


>gi|212636824|ref|YP_002313349.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3]
 gi|212558308|gb|ACJ30762.1| Octaprenyl-diphosphate synthase [Shewanella piezotolerans WP3]
          Length = 323

 Score =  186 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   + N  + L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSILAARAIDYNGESHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++  K+     +    +L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELKS-----LEVLEILADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +S+  +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLAESSEEVQTALAEYGKFLGTAFQLTDDLL 214

Query: 229 DC---EEDLPK 236
           D     E+L K
Sbjct: 215 DYTAETEELGK 225


>gi|56459585|ref|YP_154866.1| geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
 gi|56178595|gb|AAV81317.1| Geranylgeranyl pyrophosphate synthase [Idiomarina loihiensis L2TR]
          Length = 324

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L                ++   IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 44  GGKRLRPLLAILACRALGYEGNDHRKLATIIEFIHTATLLHDDV--VDESELRRGRKTAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++        D++R   +L+   NI  +G +  Q+++  
Sbjct: 102 AVFGNEASVLVGDFLYTRAFQLMVDL-----DSLRILRILADATNIISEGEVL-QLMNCN 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E   F +   KT  L   A E   ++    +   ++L  +G  LG  FQL DDL+
Sbjct: 156 DPDTSEASYFNVIYGKTAKLFEAATELAGVLTAQDEKVTQQLADYGRYLGTAFQLVDDLM 215

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 216 DYTADSE 222


>gi|291557469|emb|CBL34586.1| farnesyl-diphosphate synthase [Eubacterium siraeum V10Sc8a]
          Length = 302

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 10/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +GG  +  +E     +  L  +      +        L  A  Y+L  GGK+IR  L  E
Sbjct: 12  DGGFDAVFREYRAIFEKQLRTVCDSFCDNGAKYRA--LYDAASYSLEAGGKRIRPVLAFE 69

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +   +   A+    A+E IH +SLIHDDLP MD+  +RRG+P+ H  + E  A++AG
Sbjct: 70  MCRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDDMRRGRPSCHKAHGEAVALLAG 129

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L  YA + I    + L    ++ ++  L       GM+ GQ +D   +F     +  +
Sbjct: 130 DALSAYAGKYICD--SDLPAEKKTAMIKELYDR--TLGMIEGQTIDTDGKFDTLDGLLSM 185

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +MKT  L+  A   G I A A + +    R +  ++G+ FQ+ DD+LD     E+L K
Sbjct: 186 YEMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244


>gi|124494465|gb|ABN13351.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494485|gb|ABN13370.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494505|gb|ABN13389.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
 gi|124494525|gb|ABN13408.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
          Length = 348

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +            L  A  + L  GGK+IR   V       + +      V   +E
Sbjct: 43  DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 102

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++        
Sbjct: 103 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 160

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I SQ ++ +            Q+ D  +   +        K KT  L+  +C+ GAI +
Sbjct: 161 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 214

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253


>gi|312874544|ref|ZP_07734569.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b]
 gi|315653403|ref|ZP_07906325.1| geranyltranstransferase [Lactobacillus iners ATCC 55195]
 gi|311089935|gb|EFQ48354.1| polyprenyl synthetase [Lactobacillus iners LEAF 2053A-b]
 gi|315489328|gb|EFU78968.1| geranyltranstransferase [Lactobacillus iners ATCC 55195]
          Length = 288

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 22/236 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
              +I++ L + L  T       ++ +    + Y+ L GGK++R  L      + +    
Sbjct: 10  YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    +
Sbjct: 64  EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
            I+            +L+  +T  IG  GM GGQ +DI          +ET +  ++ +K
Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           TG L+  + +  A  A+++   +  L  F E  G  +Q+ DD++D  +      KK
Sbjct: 178 TGCLIVASVQMAAKYANSNDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233


>gi|163867858|ref|YP_001609062.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476]
 gi|161017509|emb|CAK01067.1| octaprenyl-diphosphate synthase [Bartonella tribocorum CIP 105476]
          Length = 338

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           Q++ +R++  +  +  ++   M  + ++ L+S+      GGK++R  +    A +F    
Sbjct: 25  QKDMERVNQFILSM-AKSEIEMIPEISNHLISS------GGKRLRPMITLASAHMFGYQS 77

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++  A+E +H  +L+HDD+  +D   +RRGK T  + +    +I+ G+ LL  AF+
Sbjct: 78  DGHIKLATAVEFMHTATLLHDDV--IDESDLRRGKSTARMIWGNQASILVGDFLLGQAFK 135

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++    +     I +  +L+    I  +G +  Q+   ++     +    I   KT AL 
Sbjct: 136 MMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAAKNIKTSSSDYLKIINAKTAALF 189

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A E G I+A     E+  LR +G +LG+ FQL DD LD   
Sbjct: 190 SAAAEVGPIVAGYGHKERSALREYGTSLGLAFQLIDDALDYSG 232


>gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
 gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
 gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
 gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
          Length = 302

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 80/234 (34%), Positives = 126/234 (53%), Gaps = 13/234 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           L++  +RI   L   L   +        + L SA+ +A+ LGGK++R  L    A+L  N
Sbjct: 12  LKQAQERIQQDLLSALEAFSL------PEPLKSAVYHAVMLGGKRVRPALCYATAALQPN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N     R   AIE IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  SNFAAVRRAAVAIEMIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           AFE++ S        +   ++L            M+ GQ++D+Q E   +D++Q+  I +
Sbjct: 126 AFEVLGSRLFDQGVAVDQAVVLRQMQILATASSKMVCGQVMDLQAEGKQVDQSQLENIHR 185

Query: 183 MKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KTGAL+  A    A+ + + +     +LR +G+ +G+ FQ+ DD+LD   +  
Sbjct: 186 NKTGALIQAAIMMAAVTIFNGTDQAIPQLRQYGQAIGLAFQVQDDILDIVSETE 239


>gi|331000286|ref|ZP_08323970.1| octaprenyl pyrophosphate synthetase [Parasutterella
           excrementihominis YIT 11859]
 gi|329572452|gb|EGG54105.1| octaprenyl pyrophosphate synthetase [Parasutterella
           excrementihominis YIT 11859]
          Length = 326

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 17/227 (7%)

Query: 7   SKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           + + E+   +D  ++DDL  Q+   +  + +D +++A      GGK++R  ++   A   
Sbjct: 13  APISEDLLAVDREVIDDL--QSDIPLIKKISDYIVTA------GGKRMRPIVLMLIARAL 64

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  + +   IE +H  SL+HDD+  +D   +RRGKPT   ++    AI+ G+ + +
Sbjct: 65  GYQGKEHIFLATMIEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAPAILTGDFMYS 122

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AF+++   +     N+R   +++   N   +G +  Q+L+I D  +DE + F + + KT
Sbjct: 123 RAFQLMVRTQ-----NLRICEIVAGAVNRVSEGEVI-QLLNIHDTTLDEARYFDVIERKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L   A    +++A AS+  ++++  +   LG  FQ+ DD+LD   
Sbjct: 177 GVLFEAAARMASVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTG 223


>gi|323466278|gb|ADX69965.1| Geranyltranstransferase [Lactobacillus helveticus H10]
          Length = 289

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 17/226 (7%)

Query: 19  ILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRV 75
           ++DD L   A H+ ++  N ++   + Y+++ GGK++R  L     +          +R+
Sbjct: 14  VIDDYL---AKHLASEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190
                   +QL+  +T  +G  GM+GGQ LDI          D   +  ++ +KTG L+ 
Sbjct: 131 QS------AQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQMEWLKTGCLIQ 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E   K
Sbjct: 185 ASVEMAAVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVETSEK 230


>gi|295425229|ref|ZP_06817932.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664]
 gi|295065005|gb|EFG55910.1| geranyltranstransferase [Lactobacillus amylolyticus DSM 11664]
          Length = 289

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 120/234 (51%), Gaps = 17/234 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASL 64
           +  +   K+   ++++ L     H+  + +D ++   + Y+++ GGK++R  L     + 
Sbjct: 2   TAFKYFQKQWTPVINEYL---NKHLANEVDDQKISQIMAYSVMAGGKRLRPLLFLATLNT 58

Query: 65  FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    +R+   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  +I+AG+ L
Sbjct: 59  LGKEITEDEIRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAESILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVF 178
           L    + I+           ++L+  +T  +G  GM+GGQ LDI          D   + 
Sbjct: 119 LPMGIQWIAEGSKS------AELVQIITQAVGPNGMVGGQYLDIDSTNNQSVAGDAKFIN 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++ +KTG L+  + +  A++  ASQ E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 173 RMEWLKTGCLIEASVKMAAVLVGASQIEEVKLVDFAKVFGRSYQIYDDLVDVVE 226


>gi|294013329|ref|YP_003546789.1| geranyltranstransferase [Sphingobium japonicum UT26S]
 gi|292676659|dbj|BAI98177.1| geranyltranstransferase [Sphingobium japonicum UT26S]
          Length = 305

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 133/213 (62%), Gaps = 3/213 (1%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L      +      RL  A+R+A + GGK++R  LV   + LFN++  +ALRVG A+ECI
Sbjct: 28  LFDRLLAVPDDPRRRLYEAMRHAAMDGGKRLRPLLVQAASDLFNISRESALRVGVAVECI 87

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H YSL+HDDLP+MD+  +RRGKPTVH  +DE TAI+AG+ L   AFEI++  +T     +
Sbjct: 88  HVYSLVHDDLPAMDDDDMRRGKPTVHRAFDEATAILAGDCLHDLAFEILADEETHPDPFV 147

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMA 200
           R +L+ +L    G  GM GGQM+D++ E    D   V  +Q++KTGAL+    ++ AIMA
Sbjct: 148 RIELVKALAVASGTSGMAGGQMMDLEAEKASFDLPTVTRLQQLKTGALIAVCVDAAAIMA 207

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                 + RL  +  ++G+ FQ+ADDLLD E D
Sbjct: 208 LIPPEGRMRLHGYARDIGLAFQIADDLLDVEGD 240


>gi|241763806|ref|ZP_04761852.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
 gi|241366938|gb|EER61343.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
          Length = 309

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L+                + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 29  AGGKRLRPALLLLICGALGYRGNHRFSLAAVVELIHTATLLHDDV--VDASTLRRGRATA 86

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L T +F+++         N+R   +LS   N+  +G +  Q++++
Sbjct: 87  NQTFGNPASVLVGDFLHTRSFQMMVEAG-----NMRIMEVLSEATNVIAEGEVL-QLMNM 140

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +DE     + + KT  L   +   GAI+A +    +E    +G+ LG  FQ+ DD+
Sbjct: 141 HDASLDEAGYLQVIRSKTAKLFEASARLGAILAESPPQIEEACATYGQALGTAFQIIDDV 200

Query: 228 LDCEE 232
           LD + 
Sbjct: 201 LDYDG 205


>gi|113460390|ref|YP_718452.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT]
 gi|112822433|gb|ABI24522.1| octaprenyl-diphosphate synthase [Haemophilus somnus 129PT]
          Length = 326

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      +   A +E IH  +L+HDD+  +D   +RRG PT +
Sbjct: 46  GGKRIRPMIALLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTAN 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++   +     +R   ++S   NI  +G +  Q++++ 
Sbjct: 104 AEFGNAASVLVGDFIYTRAFQLMTKLNS-----LRILQIMSDATNIIAEGEV-QQLMNVN 157

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI A ++  ++  L+ +G  LG  FQL DD+L
Sbjct: 158 DPETSEDNYMKVIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVL 217

Query: 229 DCEE 232
           D   
Sbjct: 218 DYSA 221


>gi|83953189|ref|ZP_00961911.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp.
           NAS-14.1]
 gi|83842157|gb|EAP81325.1| geranylgeranyl pyrophosphate synthetase [Sulfitobacter sp.
           NAS-14.1]
          Length = 301

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 89/218 (40%), Positives = 130/218 (59%), Gaps = 9/218 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           DL +    H     +  +  A+RYA+ GGK +R+FLV E A L  V    A     AIE 
Sbjct: 26  DLAIGQILHGLGGLDGTVAEAMRYAVTGGKGLRAFLVIESARLHGVMDAQAAPAAGAIEA 85

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSL+HDD+P MD+  +RRG+PTVH+++DE TA++AG+ L T AFE++++  T   D 
Sbjct: 86  LHAYSLVHDDMPCMDDDALRRGQPTVHVKWDEATAVLAGDALQTLAFELVAA--TGCGDA 143

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGA 197
            R  L+  L    G++GM+GGQ +DI  E     +   Q+  +Q  KTGAL+ +A  +G 
Sbjct: 144 ERVALVTGLARAAGVRGMVGGQAMDIAAETARQPLTLDQITTLQAGKTGALIEWAATAGP 203

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +MA    ++   LR +  NLG+ FQ+ADD+LD E D  
Sbjct: 204 VMAG---DDAAALRSYARNLGLAFQIADDILDVEGDAA 238


>gi|315606371|ref|ZP_07881386.1| geranyltranstransferase [Prevotella buccae ATCC 33574]
 gi|315251777|gb|EFU31751.1| geranyltranstransferase [Prevotella buccae ATCC 33574]
          Length = 323

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 20/228 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            E  + I+  LD L          +    L + I+Y L +GGK+IR  L+    +LF  +
Sbjct: 5   DELLQLINRYLDSL-------PYDRKPASLYAPIKYVLSMGGKRIRPTLMLLAYNLFKDD 57

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L    A+E  H Y+L+HDDL  MDN  +RRG+PTVH +++   A+++G+ +L  A+
Sbjct: 58  PEKILSSACALETYHNYTLLHDDL--MDNADVRRGQPTVHKKWNANLAVLSGDSMLVLAY 115

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKT 185
           + ++   + L + +R               +  GQ +D++ E  +   E +   + ++KT
Sbjct: 116 QRMTECDSHLAEVLRL-------FTETALEIGEGQQMDMEFETRNDVREEEYIEMIRLKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             L+  A + GA++A A  ++ + L  FGE +G+ FQL DD LD   D
Sbjct: 169 SVLLACAMKIGALLADAPADDADNLYRFGEKIGLAFQLQDDYLDVYGD 216


>gi|309809474|ref|ZP_07703332.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170146|gb|EFO72181.1| polyprenyl synthetase [Lactobacillus iners SPIN 2503V10-D]
          Length = 288

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 22/236 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN-H 69
              +I++ L + L  T       ++ +    + Y+ L GGK++R  L      + +    
Sbjct: 10  YLPQINSFLKEQLECTI------NDHKFSEIMSYSVLAGGKRLRPLLFLATLEILSHPIS 63

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++   IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    +
Sbjct: 64  EKEIKIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQ 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
            I+            +L+  +T  IG  GM GGQ +DI          +ET +  ++ +K
Sbjct: 124 WIAEASNS------YELIKVITRAIGPNGMAGGQYMDIDSTNNLSYKRNETFIDKMEFLK 177

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           TG L+  + +  A  A +S   +  L  F E  G  +Q+ DD++D  +      KK
Sbjct: 178 TGCLIVASVQMAAEYASSSDKVQMNLLHFAEAFGRAYQIYDDIVDIMQTSVQAGKK 233


>gi|92112606|ref|YP_572534.1| trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM
           3043]
 gi|91795696|gb|ABE57835.1| Trans-hexaprenyltranstransferase [Chromohalobacter salexigens DSM
           3043]
          Length = 337

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 9/191 (4%)

Query: 44  RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY +  GGK++R  LV   A   N      + +   IE +H  +L+HDD+  +D  ++RR
Sbjct: 52  RYIIESGGKRLRPLLVLLAARSLNYPGDRHVTLATLIEFMHTSTLLHDDV--VDESHLRR 109

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T +  +    +++ G+ L + +F+++    +     +R   +LS    +  +G +  
Sbjct: 110 GKATANDAWGNAPSVLVGDFLYSRSFQMMVEVGS-----MRVMEILSGATCVIAEGEVL- 163

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+ +I +  IDE   F   + KT  L   A  SGA++A A+  ++E L+ +G  LG+ FQ
Sbjct: 164 QLTNIGNPDIDEAAYFDTIQGKTAMLFEAASHSGAVLAEATPAQEEALKLYGRYLGLAFQ 223

Query: 223 LADDLLDCEED 233
           L DDLLD + D
Sbjct: 224 LVDDLLDYQGD 234


>gi|300690860|ref|YP_003751855.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum PSI07]
 gi|299077920|emb|CBJ50559.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum PSI07]
          Length = 299

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +     R ++ L+  L       +     RL +A+RYA LG GK++R  LV   
Sbjct: 2   SDFAQWMASVVARTESALERALP-----GEPVAPQRLHAAMRYASLGAGKRVRPLLVHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L   +      V  A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++AG+
Sbjct: 57  GALGEASPDALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L T AF +++     +    R+ L+  L    G  GM GGQ +D+Q     + +  +  
Sbjct: 117 ALQTQAFIMLAELGA-VSPATRAVLVGELARASGSLGMAGGQAIDLQSVGVALSQEALET 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+ A  +    E++  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231


>gi|308051079|ref|YP_003914645.1| trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799]
 gi|307633269|gb|ADN77571.1| Trans-hexaprenyltranstransferase [Ferrimonas balearica DSM 9799]
          Length = 322

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      +++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLAVLAARAVDYQGDDHVKLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++  K       R    L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNQASVLVGDFLYTRSFQMMTELKRP-----RVLEDLADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A       + L  +G  LG  FQL DD+L
Sbjct: 155 DPNTTEESYMQVIYCKTARLFEAATHLAAVIADQPTEVCDALSDYGRYLGTAFQLVDDVL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYTADAE 221


>gi|319407551|emb|CBI81201.1| octaprenyl-diphosphate synthase [Bartonella sp. 1-1C]
          Length = 337

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S  +E+ + ++ ++  +     + +    N  + S       GGK+IR  +    A +
Sbjct: 19  LFSLTKEDMECVNQLIISMAQSNVAIIPEISNYLISS-------GGKRIRPMITLATAHM 71

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F       +++  A+E +H  +L+HDD+  +D   +RRGK T  I +    +I+ G+ LL
Sbjct: 72  FGYQGDKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTARIIWGNQASILVGDFLL 129

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             AF+++    +     + +  +LS    I  +G +  Q+   ++   + +    I   K
Sbjct: 130 GQAFKMMVDVGS-----LDALSVLSNAAAIIAEGEIM-QLSAAKNIETNVSDYLKIINAK 183

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL   A E G I+A     E+  L  +G +LG+ FQL DD+LD   
Sbjct: 184 TAALFSAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLIDDVLDYSS 231


>gi|156937956|ref|YP_001435752.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566940|gb|ABU82345.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 327

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 19/237 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
             L   L E    +D  + ++L              L  A R+    GGK++R  LV   
Sbjct: 2   ETLTRYLSEFRPLVDKKIMEVLE--------GSPKELYEAARHLPSKGGKRLRPALVLLV 53

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                     AL   AA+E +H ++L+HDD+  MD   +RRG PTVH+ Y E  AI+AG+
Sbjct: 54  NKALGGEVEGALPAAAAVELLHNFTLVHDDI--MDRDELRRGVPTVHVLYGESMAILAGD 111

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
            L   A+E +               +L+ +       +  GQ +D++ E    + E +  
Sbjct: 112 LLYAKAYEALLQSPQPPDLVKEMTEVLTWS----AVTVAEGQAMDMEFEKRWDVTEEEYL 167

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + + KTGAL   +   GA+ A+  +  K+ ++ FG  LG  FQ+ DD+L    D  
Sbjct: 168 EMIEKKTGALFGASAALGALTAN-KREVKDLMKEFGLILGKAFQIKDDVLSLLGDEK 223


>gi|308174066|ref|YP_003920771.1| heptaprenyl diphosphate synthase component II [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606930|emb|CBI43301.1| heptaprenyl diphosphate synthase component II [Bacillus
           amyloliquefaciens DSM 7]
 gi|328912396|gb|AEB63992.1| heptaprenyl diphosphate synthase component II [Bacillus
           amyloliquefaciens LL3]
          Length = 320

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +            L  A  + L  GGK+IR   V       + +      V   +E
Sbjct: 15  DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++       D
Sbjct: 75  MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRL-----D 127

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
             ++  +LS T      G +  Q+ D  +   +        K KT  L+  +C+ GAI +
Sbjct: 128 EPKAHRILSKTIVEVCLGEIE-QIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 187 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225


>gi|56420745|ref|YP_148063.1| heptaprenyl diphosphate synthase component II [Geobacillus
           kaustophilus HTA426]
 gi|56380587|dbj|BAD76495.1| heptaprenyl diphosphate synthasecomponent II (spore germination
           protein C3) [Geobacillus kaustophilus HTA426]
          Length = 320

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 8/225 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     ++  L  +  +    +++++     +A+     GGK+IR   V   A   + 
Sbjct: 2   KLKAMYSFLNDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+  ++    A+  G+ L   +
Sbjct: 62  DFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYLFARS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++   +     + ++ ++ + H          Q+ D               + KT  
Sbjct: 120 LERMAELDSPRAHQVLAKTIVEVCHGEI------EQIKDKYRFDQPLRTYLRRIRRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C+ GA+ A A +    +L  FG  +G+ FQ+ DD+LD   
Sbjct: 174 LIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTG 218


>gi|118497514|ref|YP_898564.1| octaprenyl diphosphate synthase [Francisella tularensis subsp.
           novicida U112]
 gi|195536208|ref|ZP_03079215.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           novicida FTE]
 gi|118423420|gb|ABK89810.1| octaprenyl diphosphate synthase [Francisella novicida U112]
 gi|194372685|gb|EDX27396.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 325

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 115/236 (48%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++   QN     + +R +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|170717395|ref|YP_001783470.1| polyprenyl synthetase [Haemophilus somnus 2336]
 gi|168825524|gb|ACA30895.1| Polyprenyl synthetase [Haemophilus somnus 2336]
          Length = 330

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 113/235 (48%), Gaps = 20/235 (8%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFL 57
           MN   + S ++ +  +++  +   L Q  S +       L++ + Y ++  GGK+IR  +
Sbjct: 8   MNIHAIQSLIKTDMDKVNATI---LAQLNSDVA------LINQLGYYIVQSGGKRIRPMI 58

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
               A   N      +   A +E IH  +L+HDD+  +D   +RRG PT + ++    ++
Sbjct: 59  ALLAARALNYQGDEPITCAAFVEFIHTATLLHDDV--VDESDMRRGNPTANAEFGNAASV 116

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ + T AF++++   +     +R   ++S   NI  +G +  Q++++ D    E   
Sbjct: 117 LVGDFIYTRAFQLMTKLNS-----LRILQIMSDATNIIAEGEV-QQLMNVNDPETSEDNY 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KT  L   A +  AI A ++  ++  L+ +G  LG  FQL DD+LD   
Sbjct: 171 MKVIYSKTARLFEVATQCAAITAQSNAEQEIALQHYGRYLGTAFQLVDDVLDYSA 225


>gi|332308087|ref|YP_004435938.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175416|gb|AEE24670.1| Polyprenyl synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 323

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   N+       + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ +      D++R   +LS   N+  +G +  Q+++  
Sbjct: 101 EVFGNQASVLVGDFLYTRSFQMMVTL-----DSMRVMQILSDATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++   S+  +  ++ +G+ LG  FQL DD++
Sbjct: 155 DPNTTEESYMEVIYSKTARLFEAATLLAAVLTKQSEAIENAMQDYGKYLGTAFQLVDDIM 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYASDSE 221


>gi|49475216|ref|YP_033257.1| octaprenyl-diphosphate synthase [Bartonella henselae str.
           Houston-1]
 gi|49238021|emb|CAF27227.1| Octaprenyl-diphosphate synthase [Bartonella henselae str.
           Houston-1]
          Length = 356

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F   +   +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 75  GGKRLRPMLTLASARMFGYQNDGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTAR 132

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +I+ G+ LL  AF+++    +     I +  +L+    I  +G +  Q+   +
Sbjct: 133 MIWGNQASILVGDFLLGQAFKMMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSATK 186

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +     +    I   KT AL   A E G I+A     E+  LR +G  LG+ FQL DD L
Sbjct: 187 NIETSISDYLKIINAKTAALFSAAAEVGPIIAGYGHEERLALREYGTFLGLAFQLIDDAL 246

Query: 229 DCEE 232
           D   
Sbjct: 247 DYGG 250


>gi|71891880|ref|YP_277610.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71795986|gb|AAZ40737.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 323

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 111/225 (49%), Gaps = 10/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + + S+  +  ++D+  +  + + ++    +   ++Y +  GGK+IR  +    A     
Sbjct: 3   IDQISELTEQDMEDVNSEIRTRLASEI-TLINKLVQYIVDSGGKRIRPMITLLTARALCY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + +   IE IH  +L+HDD+  +D  ++RRG+ T +I +    +++ G+ + T A
Sbjct: 62  KKTQHVTIATLIEFIHTATLLHDDV--VDKSHMRRGRKTTNIIFGNAASVLVGDFIYTRA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++  ++     +R   +++   NI   G +  Q+    D  I       I   KT  
Sbjct: 120 FQMMTELES-----LRILSLMADAVNIIAAGEIL-QLTHCNDPTITIDSYMKIIYSKTAR 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A +S AI+A A+  +++ LR +G  +GI FQL DD+LD   
Sbjct: 174 LFEVASQSSAILADANTCQEKALRNYGRYMGIAFQLVDDVLDYSA 218


>gi|330831008|ref|YP_004393960.1| trans-hexaprenyltranstransferase [Aeromonas veronii B565]
 gi|328806144|gb|AEB51343.1| Trans-hexaprenyltranstransferase [Aeromonas veronii B565]
          Length = 323

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 11/192 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L    A          L++ A IE IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 42  AGGKRMRPMLTVMAARALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +F++++        N+R   +LS   N   +G +  Q+++ 
Sbjct: 100 NAMFGNAASVLVGDYLYSRSFQMMAELS-----NLRVMEILSDATNTIAEGEVL-QLMNC 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     +   KT  L   A    A++ H  +  ++ +  +G+ LG  FQ+ DD+
Sbjct: 154 NDPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDV 213

Query: 228 LDC---EEDLPK 236
           +D     E++ K
Sbjct: 214 MDYCSQSEEMGK 225


>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
 gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
          Length = 261

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 10/205 (4%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           +  A+RYA+ GG++           L       A+    A+E I     + DDLPS+D+ 
Sbjct: 1   MHDAMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDS 60

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +R GKPTVH  +   TA+ AG  LL   FE ++    +   +  ++++  +   IG  G
Sbjct: 61  ELRHGKPTVHRAFGIPTALFAGTALLALGFEHLA---ARYSGDTAARMVAEVGRAIGSTG 117

Query: 159 MLGGQMLD----IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +L GQ +D      D  ++   +  +   KT AL+  +  +GAI   AS+ E E LR +G
Sbjct: 118 LLAGQAVDLGIENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYG 177

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
              G+++Q+ DD+ D     E+L K
Sbjct: 178 RVTGLLYQIVDDVADATKTMEELGK 202


>gi|217970068|ref|YP_002355302.1| trans-hexaprenyltranstransferase [Thauera sp. MZ1T]
 gi|217507395|gb|ACK54406.1| Trans-hexaprenyltranstransferase [Thauera sp. MZ1T]
          Length = 322

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 17/232 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + +  + + +DT++ + L     H       R+     Y +  GGK++R  LV   A 
Sbjct: 6   LFAPIAADMQAVDTVIRNRL-----HSDVALIRRIAE---YIVGSGGKRLRPALVLYAAG 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +   +    + A +E IH  SL+HDD+  +D   +RRGK T +  +   +A++ G+ L
Sbjct: 58  ALDYRGVHHHELAAVVEFIHTASLLHDDV--VDESDLRRGKRTANAAFGNASAVLVGDFL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++        D +R   +L+   NI  +G +  Q+L+  +  +       + + 
Sbjct: 116 YSRAFQMMVG-----VDEMRVMRVLADATNIIAEGEVL-QLLNCHNADVVIEDYLRVIRY 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT  L   A   G I+A A    ++RL  FG +LG  FQL DD+LD   D  
Sbjct: 170 KTAKLFEAAARLGGIVAGADDALEQRLAAFGMHLGTAFQLIDDVLDYSADEA 221


>gi|312883913|ref|ZP_07743630.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368371|gb|EFP95906.1| octaprenyl-diphosphate synthase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 323

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRVRPLLAIISAKALGYKGQGHTLSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 SAFGNAASVLVGDYIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E     +   KT  L   A + GA+++ A    +  L+ +G  LG  FQL DD++
Sbjct: 155 DPNVSEESYMQVIYSKTARLFEVATQVGAVLSEAPSEIEIALKNYGRYLGTAFQLIDDVM 214

Query: 229 DCEEDLPKK 237
           D      K+
Sbjct: 215 DYTS-TGKE 222


>gi|256545252|ref|ZP_05472617.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170]
 gi|256399079|gb|EEU12691.1| geranyltranstransferase [Anaerococcus vaginalis ATCC 51170]
          Length = 277

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/224 (33%), Positives = 114/224 (50%), Gaps = 8/224 (3%)

Query: 12  NSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---N 66
           N ++ D IL  D  ++  A   +   ++ L  ++ YA   GK+IR  +  E   +     
Sbjct: 2   NKEKFDKILIADKNIIDMAMIKKFDEDNPLSESLIYASDSGKRIRPVVFLETIKMLLGEG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + +  A+E +H YSL+HDD+P MDN   RRGK TVH +Y E  AI+ G+ LL+Y
Sbjct: 62  SVDEKLIDLSLALEMVHAYSLVHDDMPCMDNDDYRRGKLTVHKKYGEDLAILVGDSLLSY 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-FMIQKMKT 185
           AFEII      + D    +    L    G  GM+ GQ+ DI+ +  +  +    + K KT
Sbjct: 122 AFEIILDL--SIYDQRFLEAGKYLAKACGKDGMIKGQVFDIKSKKDENIEYILDVYKNKT 179

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L   A    A+ A+  +++ E+L  +   LG+ FQL DD+LD
Sbjct: 180 ARLFMAAIMMAALYANVEKDKLEKLENYAYYLGLAFQLQDDILD 223


>gi|221310190|ref|ZP_03592037.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221314513|ref|ZP_03596318.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221319435|ref|ZP_03600729.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221323711|ref|ZP_03605005.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|321311744|ref|YP_004204031.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           BSn5]
 gi|291484698|dbj|BAI85773.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. natto BEST195]
 gi|320018018|gb|ADV93004.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           BSn5]
          Length = 320

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +            L  A  + L  GGK+IR   V       + +      V   +E
Sbjct: 15  DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++        
Sbjct: 75  MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I SQ ++ +            Q+ D  +   +        K KT  L+  +C+ GAI +
Sbjct: 133 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 187 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225


>gi|325957123|ref|YP_004292535.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
 gi|325333688|gb|ADZ07596.1| Geranyltranstransferase [Lactobacillus acidophilus 30SC]
 gi|327183847|gb|AEA32294.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1118]
          Length = 289

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 15/221 (6%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVG 76
           ++DD L +  +      + ++   + Y+++ GGK++R  L     +          +R+ 
Sbjct: 14  VIDDYLAKHLA--DEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIA 71

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+    
Sbjct: 72  CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSN 131

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCF 191
                  ++L+  +T  +G  GM+GGQ LDI          D   +  ++ +KTG L+  
Sbjct: 132 S------AELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQA 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + E  A+ A A+  E+ +L  + +  G  +Q+ DDL+D  E
Sbjct: 186 SVEMAAVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDVVE 226


>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
           [Acinetobacter sp. ATCC 27244]
 gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
           [Acinetobacter sp. ATCC 27244]
          Length = 303

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 129/233 (55%), Gaps = 16/233 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           L++  +RI     DLL   A+       + L +A+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTALAAF---SIPEPLKAAVHHAVMLGGKRVRPALCYATASLKPN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N     R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  HNFAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFEI+ S    +    I SQ++L            M+ GQ+LD+Q E   +D+T++  I 
Sbjct: 126 AFEILGSRLFDEQGQGIDSQIVLKQMQILATASSKMVAGQVLDLQAEGKQVDQTELENIH 185

Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA  + A        +LR FG+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTVFAGTDPA-IPKLRQFGQTIGLAFQVQDDILDITA 237


>gi|332983459|ref|YP_004464900.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
 gi|332701137|gb|AEE98078.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
          Length = 323

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 8/203 (3%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           H   + + R+ + +     GGK+IR  LV      F       +    A E IH  SL+H
Sbjct: 25  HAIGESDYRIRNMLSGLFNGGKRIRPRLVLLSGMCFGELDEKMIHAAVAAELIHTASLVH 84

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D    RR  PT++       A++AG+ L   AFEI+S  +           + +
Sbjct: 85  DDI--IDMSDYRRNNPTINSISGNHVAVLAGDFLFAKAFEILSEHELINSMLYFVNAIQN 142

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           +     +      Q     D  + E         KT +L+C  C +GA  A A  +E   
Sbjct: 143 MCSGEIV------QSYRRFDIRVTEQDYMDYIDKKTASLICACCMAGAQSAGAGSHEINL 196

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
           +  FG  +G  FQ+ DD+LD   
Sbjct: 197 MGSFGYKIGRAFQITDDILDVTG 219


>gi|13473247|ref|NP_104814.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Mesorhizobium loti MAFF303099]
 gi|14023995|dbj|BAB50600.1| geranyltranstransferase; farnesyl-diphosphate synthase
           [Mesorhizobium loti MAFF303099]
          Length = 305

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 112/236 (47%), Positives = 155/236 (65%), Gaps = 3/236 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L   +  ++ +L  LL       +    DRL++A+R+  L GGK++R FLV E A
Sbjct: 8   AFEMALIRRAAAVEVLLRRLLDDRPLSGEIARPDRLMAAMRHGVLNGGKRLRPFLVMESA 67

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF+ +   ALRV AA+EC+HCYSLIHDDLP+MD+  +RRG+PTVH  +DE TAI+AG+ 
Sbjct: 68  ALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDLRRGQPTVHKAFDEATAILAGDA 127

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLT AF+I++S  T L  + R+ L+L+L    G  GM+GGQ LD++ E    DE  +  +
Sbjct: 128 LLTLAFDIVASEATVLPADRRAALVLALARAAGAGGMVGGQKLDLEAEQTPPDEAGIITL 187

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           Q MKTGAL+ FACE+GAI+A A   ++ERL  FG  +G+ FQLADDLLD   D  +
Sbjct: 188 QAMKTGALIRFACEAGAIIAGAPAEDRERLAEFGSAIGLAFQLADDLLDLTADAGQ 243


>gi|254475094|ref|ZP_05088480.1| polyprenyl synthetase [Ruegeria sp. R11]
 gi|214029337|gb|EEB70172.1| polyprenyl synthetase [Ruegeria sp. R11]
          Length = 294

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 95/238 (39%), Positives = 140/238 (58%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECA 62
           + +     S+     L +   +  +HM+ +   ND L +A+RYA+ GGK +R FLV E A
Sbjct: 1   MAAAADAQSRPFAQALKEAQSRITAHMEARLGGNDPLHAAMRYAITGGKMLRGFLVLESA 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L  V+   AL    AIECIH YSL+HDDLP MD+  +RRG+PTVH ++DE  A++AG+ 
Sbjct: 61  RLHGVDDDAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEAMAVLAGDS 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVF 178
           L T+AFE+++ PK      +  + +     + G  GM+ GQMLDI  E     +D  Q+ 
Sbjct: 121 LQTFAFELLADPKIGPHALVLIRGL---AQSSGKDGMVSGQMLDIAAETATTPLDLDQIT 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +Q  KTG L+ ++  +GA+MA A +     LR + + LG+ FQ+ADD+LD E D  K
Sbjct: 178 RLQNRKTGCLISWSATAGAVMAGADE---APLRRYADALGLAFQIADDILDVEGDAAK 232


>gi|154251236|ref|YP_001412060.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154155186|gb|ABS62403.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 302

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 96/236 (40%), Positives = 144/236 (61%), Gaps = 8/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
               + L   + +++ +LD LL +           R+  A+RYA L GGK+ R FLV + 
Sbjct: 9   AQFEAGLATVAAKVEEMLDRLLPRVEGP-----EARIAEAMRYAALGGGKRFRPFLVAQS 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF V    ALR  AA EC+H YSL+HDDLP MD+  +R G P VH Q+DE TA++AG+
Sbjct: 64  AALFGVASEAALRAAAAAECVHIYSLVHDDLPCMDDDDLRHGLPAVHRQFDEATAVLAGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--VFM 179
            LLT AFEI++ P+T  +  +R +L+  L    G  GM+GGQ++D+  E  +     +  
Sbjct: 124 ALLTLAFEILADPETHERARVRIELVRRLAIASGAHGMVGGQIIDLTSEGRELDMGGITR 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q++KTGAL+ F+CE+GAI+  AS +    L  +  ++G+ +Q+ADD+LD E D  
Sbjct: 184 LQQLKTGALISFSCEAGAILGRASPDALHALHAYAHDMGLAYQIADDILDAEGDAA 239


>gi|332994564|gb|AEF04619.1| Geranylgeranyl pyrophosphate synthase [Alteromonas sp. SN2]
          Length = 324

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    + +     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLSARAMGIENADHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ S K      +R   +LS   N   +G +  Q+++  
Sbjct: 101 AVFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMDILSEATNQIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E + F +   KT  L   A +  A++    +N +  ++ +G++LG  FQLADD+L
Sbjct: 155 DASTTEARYFDVIYGKTARLFEAATQLAAVLTDQPENVEHAMQEYGKHLGTAFQLADDIL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYMAD 219


>gi|56551460|ref|YP_162299.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543034|gb|AAV89188.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 337

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 15/225 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +  + + ++ ++ D + Q+   +  +    L+S+      GGK++R  L+  C+ L    
Sbjct: 23  VASDMQAVNQVILDRM-QSEVPLIPELAGHLISS------GGKRMRPMLMLACSRLIGEP 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                ++ AAIE IH  +L+HDD+  +D+  +RRGK T +  +     ++ G+ LL+ AF
Sbjct: 76  RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++    +     +R+  +LS    I  QG +   +   Q E  DE +   I   KT  L
Sbjct: 134 EMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQVE-TDEARYLSIIGAKTAVL 187

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +C   A+MA  S+++++ L  +G+ LGI FQL DD +D   D
Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSD 232


>gi|296332988|ref|ZP_06875445.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305674908|ref|YP_003866580.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296149839|gb|EFG90731.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305413152|gb|ADM38271.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 320

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +            L  A  + L  GGK+IR   V       + +      V   +E
Sbjct: 15  DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++        
Sbjct: 75  MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I SQ ++ +            Q+ D  +   +        K KT  L+  +C+ GAI +
Sbjct: 133 RILSQTIVEVCLGEI------EQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 187 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225


>gi|157828600|ref|YP_001494842.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933313|ref|YP_001650102.1| decaprenyl diphosphate synthase [Rickettsia rickettsii str. Iowa]
 gi|157801081|gb|ABV76334.1| octaprenyl-diphosphate synthase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908400|gb|ABY72696.1| farnesyl pyrophosphate synthetase [Rickettsia rickettsii str. Iowa]
          Length = 355

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 11/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I   L D + +  + + +  + ++ L+  + +Y L  GGK+IR  L    A +F+    
Sbjct: 34  KIQQDLKDEVTKLNNLIISCLKSDEELIEKVGKYLLEAGGKRIRPLLTIITAKMFDYKGD 93

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L + +F++
Sbjct: 94  NHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLFSQSFKL 151

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           + +  +     I++  +L+    I  +G +   +   +   I   +   I K KT  L  
Sbjct: 152 MVASGS-----IKAMHVLAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSKTAELFG 206

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AC  G I+A    +  + ++ FG+ LG IFQ+ DDLLD 
Sbjct: 207 TACAVGTIIAEQVDHISKDMQDFGKLLGTIFQVIDDLLDY 246


>gi|300690362|ref|YP_003751357.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07]
 gi|299077422|emb|CBJ50048.1| octaprenyl diphosphate synthase [Ralstonia solanacearum PSI07]
          Length = 322

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+   +D ++   L    + +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 6   LLAPVAEDMHAVDAVIRRRLGSEVA-LINQIGEYIISA------GGKRLRPVILLLMANA 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 59  LGYRGKHHHELAAVVEFIHTATLLHDDV--VDESELRRGRRTANAVFGNAASVLVGDFLY 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++        D++R   +L+   N+  +G +  Q+L++ D  + E +   + + K
Sbjct: 117 SRAFQMMVQA-----DSMRVMQILADATNVISEGEVL-QLLNMHDPDVTEERYLQVIRYK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +     +G  +G  FQ+ DDLLD   
Sbjct: 171 TAKLFEAAAQIGAVLSGADAATEAAAAEYGRRIGTAFQIVDDLLDYTA 218


>gi|296132634|ref|YP_003639881.1| Trans-hexaprenyltranstransferase [Thermincola sp. JR]
 gi|296031212|gb|ADG81980.1| Trans-hexaprenyltranstransferase [Thermincola potens JR]
          Length = 323

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 17/236 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  +++ +   ++  L  +       + ++ +  LL+A      GGK++R         
Sbjct: 5   ELFGEIRHDLVLVEKELKKIANLPEEKLLSETSGHLLNA------GGKRLRPAFALLAGK 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F  +    L +  A+E IH  +L+HDD+  +D    RRG PTV  ++    ++  G+ +
Sbjct: 59  TFQYDLEKLLPLAVALELIHMATLVHDDV--VDASVTRRGIPTVKAKWGNQVSVYTGDFI 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +   I+         I + + + ++    +      Q+    D            K 
Sbjct: 117 FGQSLIQIARCNNTKIAEILADVSVKMSEGEIV------QLRTTFDPKQSLRDYLFRIKR 170

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           KT  L+  +CE GA+ A A +N    LR +G  LG+ FQ+ DD+LD    E++L K
Sbjct: 171 KTALLISASCELGALAAGAPENFIRALRWYGYYLGMAFQITDDILDLIAEEKELGK 226


>gi|163858538|ref|YP_001632836.1| putative octaprenyl-diphosphate synthase [Bordetella petrii DSM
           12804]
 gi|163262266|emb|CAP44569.1| putative octaprenyl-diphosphate synthase [Bordetella petrii]
          Length = 345

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 116/240 (48%), Gaps = 13/240 (5%)

Query: 1   MNGGLPS---KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
           M   L +   +L +  + + + +  +       + ++  D ++  + + +  GGK++R  
Sbjct: 15  MTHQLAAVSLQLADIQRLVASDMGQVDALIRGRLHSRV-DLIVEVVEHLIAAGGKRLRPM 73

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           LV         +     ++   IE IH  +L+HDD+  +D   +RRG+ T +  +  + A
Sbjct: 74  LVILAGRACGGHGQGLHKLATIIEFIHTSTLLHDDV--VDESSMRRGRSTANAIWGSLPA 131

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L + +F+++    +     ++   ++  T N   +G +  Q+L + +  +DE  
Sbjct: 132 VLVGDFLYSRSFQLMVELGS-----MQIMQIIGKTTNQLAEGEIL-QLLHVHNPDVDEAA 185

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              + K KT  L   +  +GAI+A A +  + R+  FGE+LG  FQ+ DD+LD   D  +
Sbjct: 186 YMQVIKHKTAVLFAASTTAGAILAGADRELQRRMEVFGEHLGYAFQITDDVLDYTADAEQ 245


>gi|91762255|ref|ZP_01264220.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718057|gb|EAS84707.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 290

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 89/227 (39%), Positives = 135/227 (59%), Gaps = 6/227 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q    RI     D  L     ++ Q    L++A+ Y L  GGKKIRS ++ +  ++F +
Sbjct: 1   MQNKLARIAK---DTNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKI 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N+ T + +GAA+ECIH YSLIHDDLP MD+  IRRGK + HI++ E TA++AGN LLT A
Sbjct: 58  NYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FEI+ S   +L + I+  L+  L+   G  G+ GGQ LD+  E   + ++++  ++  KT
Sbjct: 118 FEILVSSSLKLNEKIKVDLIKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEIKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L  F C    I+   S  + +     G N+G++FQ+ADDL+D + 
Sbjct: 178 GKLFSFCCTVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLIDFKG 224


>gi|328676037|gb|AEB28712.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Francisella cf.
           novicida 3523]
          Length = 325

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALIKEDIQNNNQFIIDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E     +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEDYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++    +    ++ +R +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGVISLDKQSYAKYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|254439584|ref|ZP_05053078.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
 gi|198255030|gb|EDY79344.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
          Length = 332

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 16/231 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             L + L +    ++ ++ D        M ++H  R+     + +  GGK++R  L    
Sbjct: 12  DRLAAALSDEMDAVNVLITD-------RMASKHAPRIPEVTAHLVGAGGKRLRPMLTLAA 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A +   +    + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+
Sbjct: 65  AKMCGYSGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNTSSVLVGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   +F+++    +     +R   +L+       +G +  Q+    D    E     I 
Sbjct: 123 YLFARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QLTAASDLATTEAIYLQIV 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KT AL   A E G ++A       E L  +G+ LGI FQ+ DDLLD   
Sbjct: 177 RGKTAALFSAAMEVGGVIAGQDAALVEALYDYGDALGIGFQIVDDLLDYAG 227


>gi|269960912|ref|ZP_06175282.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3]
 gi|269834352|gb|EEZ88441.1| octaprenyl-diphosphate synthase [Vibrio harveyi 1DA3]
          Length = 323

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYQGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A + GAI+  A +  +   + +G+ LG  FQL DD++
Sbjct: 155 DPDTTEESYMQVIYSKTARLFESATQIGAILNDAPEEVEVAFQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|315038641|ref|YP_004032209.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
 gi|312276774|gb|ADQ59414.1| Geranyltranstransferase [Lactobacillus amylovorus GRL 1112]
          Length = 289

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 15/221 (6%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVG 76
           ++DD L +  +      + ++   + Y+++ GGK++R  L     +          +R+ 
Sbjct: 14  VIDDYLARHLA--DEVDSKKISQTMSYSVMAGGKRLRPLLFLATLNALGKKIEEPEIRIA 71

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+    
Sbjct: 72  CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAQGSN 131

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCF 191
                  ++L+  +T  +G  GM+GGQ LDI          D   +  ++ +KTG L+  
Sbjct: 132 S------AELVKIITQAVGPNGMVGGQYLDIDSTNNESVAGDADFINKMEWLKTGCLIQA 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + E  A+ A A+  E+ +L  + +  G  +Q+ DDL+D  E
Sbjct: 186 SVEMAAVYAKATDIEQVKLIDYAKAFGRSYQIYDDLVDVVE 226


>gi|332526525|ref|ZP_08402637.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2]
 gi|332110793|gb|EGJ10970.1| dimethylallyltransferase [Rubrivivax benzoatilyticus JA2]
          Length = 313

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 15/224 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +    +++D +L   L    + +  Q    ++SA      GGK++R  L+   +      
Sbjct: 1   MDAAMRQVDAVLRARLSSKVA-LIDQIASYIISA------GGKRMRPRLLLLFSEALGFR 53

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L + +F
Sbjct: 54  GPERYELAAVVELIHTSTLLHDDV--VDESSLRRGRATANSMFGNAAAVLVGDFLYSRSF 111

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++ S K+     +R   +L+   N+  +G +  Q++++ D  +   +   + + KT  L
Sbjct: 112 QMMVSVKS-----MRVLEVLAEATNVIAEGEVL-QLMNMHDADLAVDEYLRVIRFKTAKL 165

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +   GA++A AS   +E    +G +LG  FQL DDLLD E 
Sbjct: 166 FEASARLGAVLAGASAEVEEACADYGRSLGTAFQLVDDLLDYEG 209


>gi|256822892|ref|YP_003146855.1| polyprenyl synthetase [Kangiella koreensis DSM 16069]
 gi|256796431|gb|ACV27087.1| Polyprenyl synthetase [Kangiella koreensis DSM 16069]
          Length = 323

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 9/193 (4%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y +  GGK++R  L+   A   N        + A IE IH  +L+HDD+  +D   +RR
Sbjct: 38  HYIVAAGGKRLRPMLLLLAAKSLNYQGKFHPNLAAVIELIHTATLLHDDV--VDESDLRR 95

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+ T +  +    +++ G+ L + +F+++          +R   +LS T N    G +  
Sbjct: 96  GRQTANAMFGNQASVLVGDYLYSRSFQMMVEVG-----EMRVMEVLSETTNEVAAGEVL- 149

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q++++ D  +DE   + + + KT  L   A +  AI+A AS++ +E LR +G  LG  FQ
Sbjct: 150 QLMNVNDPDVDEASYYQVIERKTAILFAAATQLAAILAGASKDVEEGLREYGLQLGNAFQ 209

Query: 223 LADDLLDCEEDLP 235
           L DD LD   D  
Sbjct: 210 LVDDALDYAADTE 222


>gi|242373821|ref|ZP_04819395.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1]
 gi|242348375|gb|EES39977.1| geranyltranstransferase [Staphylococcus epidermidis M23864:W1]
          Length = 288

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 84/224 (37%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 17  DTILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           + +++ +  +    +Q    N  L  ++ Y+L  GGK+IR  L+    ++   ++   ++
Sbjct: 2   NNLIEQINTKLNQSIQNSSLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLKGDYDKGVQ 61

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH YSLIHDDLP+MD+   RRGK T H  Y E  AI+AG+ LLT AFE++S+ 
Sbjct: 62  SALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSND 121

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
           +  ++D ++ +L+  L+   G  GM+GGQ LD+Q E   +D T +  I K KTGAL+ FA
Sbjct: 122 EL-IEDKVKVKLVQRLSKASGHLGMVGGQTLDMQSENKTVDLTTLEAIHKAKTGALLTFA 180

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +   +A   Q   + L  F ++LG++FQ+ DDLLD   D  K
Sbjct: 181 VMAAVDIAQVDQETSDHLEKFSQHLGLMFQIKDDLLDVYGDEEK 224


>gi|104774286|ref|YP_619266.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116514371|ref|YP_813277.1| geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|103423367|emb|CAI98223.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116093686|gb|ABJ58839.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325126073|gb|ADY85403.1| Geranylgeranyl diphosphate synthase [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 287

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +  +E   +   I++D L    +  +   + R    + Y+++ GGK++R  L        
Sbjct: 2   TTFKEFQAKYTPIINDFLEGQLA--KESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDAL 59

Query: 66  NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            V      ++    IE IH YSLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L 
Sbjct: 60  GVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQ 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181
               + I+  +   K      L+  +T  +G +GM+ GQ LDI    +E   E  +  ++
Sbjct: 120 PLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHME 173

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +KTG L+  + +    +A     + ++   F ++ G  +QL DDL+D  E
Sbjct: 174 WLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224


>gi|241761105|ref|ZP_04759194.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241374724|gb|EER64185.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 337

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 15/225 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +  + + ++ ++ D + Q+   +  +    L+S+      GGK++R  L+  C+ L    
Sbjct: 23  VASDMQAVNQVILDRM-QSEVPLIPELAGHLISS------GGKRMRPMLMLACSRLIGEP 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                ++ AAIE IH  +L+HDD+  +D+  +RRGK T +  +     ++ G+ LL+ AF
Sbjct: 76  RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++    +     +R+  +LS    I  QG +   +   Q E  DE +   I   KT  L
Sbjct: 134 EMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQVE-TDEARYLSIIGAKTAVL 187

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +C   A+MA  S+++++ L  +G+ LGI FQL DD +D   D
Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSD 232


>gi|110633068|ref|YP_673276.1| polyprenyl synthetase [Mesorhizobium sp. BNC1]
 gi|110284052|gb|ABG62111.1| Polyprenyl synthetase [Chelativorans sp. BNC1]
          Length = 338

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F  +    +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMITLAAAQMFGYSGEGHVKLATSVEFMHTATLLHDDV--VDESDMRRGKKTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +     + +  +LS   +I  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDYLLGQAFRMMVDVGS-----LEALDVLSSAASIIAEGEVM-QLGVSK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A AS+N++  LR FG NLG+ FQL DD L
Sbjct: 169 NLETTEDEYLSVIKAKTAALFSAAAEVGPIIAEASRNDRAALRSFGINLGLAFQLVDDAL 228

Query: 229 DCEE---DLPK 236
           D      DL K
Sbjct: 229 DYGGSSRDLGK 239


>gi|328552808|gb|AEB23300.1| heptaprenyl diphosphate synthase component II [Bacillus
           amyloliquefaciens TA208]
          Length = 320

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +            L  A  + L  GGK+IR   V       + +      V   +E
Sbjct: 15  DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++       D
Sbjct: 75  MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLADSLEMMTRL-----D 127

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
             ++  +LS T      G +  Q+ D  +   +        K KT  L+  +C+ GAI +
Sbjct: 128 EPKAHRILSKTIVEVCLGEIE-QIRDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIAS 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 187 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 225


>gi|121610836|ref|YP_998643.1| dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2]
 gi|121555476|gb|ABM59625.1| Dimethylallyltranstransferase [Verminephrobacter eiseniae EF01-2]
          Length = 342

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 15/229 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + ++ + +D ++   LL     +       + +       GGK++R  L+        
Sbjct: 28  ALVADDMREVDKVIGQRLLSNVPLVDWVARHIIAA-------GGKRLRPALLLMVCGALG 80

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 L + A +E IH  +L+HDD+  +D   +RRG+PT +  +     ++ G+ L T 
Sbjct: 81  YGGAHRLSLAAVVELIHTATLLHDDV--VDASTLRRGRPTANEIFGAPACVLVGDFLHTR 138

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F+ +         N+R   +L+   N+  +G +  Q++++ D  +DE     + + KT 
Sbjct: 139 SFQTMVETG-----NMRVMEILAEATNVIAEGEVL-QLMNMHDATLDEAGYLRVIRSKTA 192

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L   +   GA++A +S + ++    +G+ LG  FQ+ DD+LD + D  
Sbjct: 193 KLFEASARLGAVLARSSPDIEQACATYGQALGTAFQIIDDVLDYDGDSA 241


>gi|332289056|ref|YP_004419908.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179]
 gi|330431952|gb|AEC17011.1| octaprenyl diphosphate synthase [Gallibacterium anatis UMN179]
          Length = 323

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+  N      +     IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPLIAVLVANALNYQGDRHITCATFIEFIHTATLLHDDV--VDESTLRRGKDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++   +     +    ++S   N+   G +  Q+++  
Sbjct: 101 AIFGNAASVLVGDFIYTRAFQLMARLGS-----LPVMQVMSDAVNVIAAGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A E  A+++ A++ + + ++ +G  LG  FQL DD+L
Sbjct: 155 DPDTTEQSYMQVIYSKTARLFEVAAECSALLSEATEQQVQAMKLYGRYLGTAFQLIDDVL 214

Query: 229 DCEEDLPK 236
           D   D+ K
Sbjct: 215 DYCADVDK 222


>gi|294139556|ref|YP_003555534.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12]
 gi|293326025|dbj|BAJ00756.1| octaprenyl-diphosphate synthase [Shewanella violacea DSS12]
          Length = 323

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLTILAARAIDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++   +     ++   ML+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELGS-----MKVLEMLADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTSEENYMRVIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLL 214

Query: 229 DC---EEDLPK 236
           D     E+L K
Sbjct: 215 DYTANTEELGK 225


>gi|242278215|ref|YP_002990344.1| polyprenyl synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121109|gb|ACS78805.1| Polyprenyl synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 296

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 127/226 (56%), Gaps = 15/226 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +  KL  ++  ++  L + L            + LL ++ Y+L+ GGK++R  LV   A 
Sbjct: 3   VKEKLAVHAADVEKYLGECLK------GMGIPENLLESMEYSLMAGGKRLRPVLVLVWAQ 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +  V     +   A++E IH YSLIHDDLP+MD+  +RRGKP+ H ++DE TAI+AG+GL
Sbjct: 57  MLGVKKEAVMPFAASLEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKKFDEATAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMI 180
           LT AF  ++            + +  +  + G  GM+GGQ++D+     D     ++ ++
Sbjct: 117 LTEAFGFMAKADA--PAEYVVEAISLMAKSAGSPGMVGGQVVDMSYTGRDGVTLDELKVM 174

Query: 181 QKMKTGALMCFACESGAIM---AHASQNEKERLRCFGENLGIIFQL 223
             MKTGAL+  AC+SGAI+   A AS+++  R   +G  +G+ FQ+
Sbjct: 175 HSMKTGALILSACKSGAILAKGAGASEDDVRRAEEYGRLIGVAFQI 220


>gi|2829443|sp|P55785|HEPS2_BACST RecName: Full=Heptaprenyl diphosphate synthase component 2;
           Short=HEPPP synthase subunit 2
 gi|1731683|dbj|BAA08725.1| component II of heptaprenyl diphosphate synthase [Geobacillus
           stearothermophilus]
          Length = 320

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 8/225 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     +   L  +  +    +Q+++     +A+     GGK+IR   V   A     
Sbjct: 2   KLKAMYSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARFGQY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+  ++    A+  G+ L   +
Sbjct: 62  DLERMKHVAVALELIHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++         + ++ ++ +            Q+ D               + KT  
Sbjct: 120 LERMAELGNPRAHQVLAKTIVEVCRGEI------EQIKDKYRFDQPLRTYLRRIRRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C+ GA+ A A +   +RL  FG  +G+ FQ+ DD+LD   
Sbjct: 174 LIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTG 218


>gi|73542643|ref|YP_297163.1| trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134]
 gi|72120056|gb|AAZ62319.1| Trans-hexaprenyltranstransferase [Ralstonia eutropha JMP134]
          Length = 325

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 110/229 (48%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L + +  + + +D ++   L      ++ Q  + ++SA      GGK++R  ++   A 
Sbjct: 8   ALLAPVAADMRAVDAVIRQRLSSEVPLIE-QIGEYIISA------GGKRLRPVILLMSAR 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F  +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L
Sbjct: 61  AFGYDGNRHHELAAVVEFIHTATLLHDDV--VDESELRRGRETANAVFGNAASVLVGDFL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++    +     +R   +LS   N+  +G +  Q+L++ D  +   +   + + 
Sbjct: 119 YSRAFQMMVDAGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPDVTIERYLQVIRY 172

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   + + GA++A A    +E    +G  +G  FQL DD+LD   
Sbjct: 173 KTAKLFEASAQLGAVLAGADAAMEEAAAEYGRRIGTAFQLIDDMLDYTA 221


>gi|207723747|ref|YP_002254145.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Ralstonia solanacearum MolK2]
 gi|206588951|emb|CAQ35913.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein
           [Ralstonia solanacearum MolK2]
          Length = 299

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +     R ++ L+  L       ++    RL +A+RYA LG GK++R  LV   
Sbjct: 2   SDFAQWMASIVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L   +      V  A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L T AF +++     +    R+ L+  L    G  GM GGQ +D+Q     + +  +  
Sbjct: 117 ALQTQAFVVLAELGA-VSPVTRAALVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+ A  +    E++  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDTYAGAVGLAFQVVDDILDVTADTA 231


>gi|332678210|gb|AEE87339.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Francisella cf.
           novicida Fx1]
          Length = 325

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++   QN     + +R +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|260752929|ref|YP_003225822.1| trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552292|gb|ACV75238.1| Trans-hexaprenyltranstransferase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 337

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 15/225 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +  + + ++ ++ D + Q+   +  +    L+S+      GGK++R  L+  C+ L    
Sbjct: 23  VASDMQAVNQVILDRM-QSEVPLIPELAGHLISS------GGKRMRPMLMLACSRLIGEP 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                ++ AAIE IH  +L+HDD+  +D+  +RRGK T +  +     ++ G+ LL+ AF
Sbjct: 76  RDIHYKLAAAIEFIHTATLLHDDV--VDHSDLRRGKRTANNIWGNGPTVLVGDFLLSRAF 133

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++    +     +R+  +LS    I  QG +   +   Q E  DE +   I   KT  L
Sbjct: 134 EMMVESGS-----LRALEILSNAAAIITQGEVDQLVSQYQVE-TDEARYLSIIGAKTAVL 187

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +C   A+MA  S+++++ L  +G+ LGI FQL DD +D   D
Sbjct: 188 FAASCRIAAVMAGCSKDKEQSLADYGQYLGIAFQLTDDAIDYMSD 232


>gi|237752529|ref|ZP_04583009.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376018|gb|EEO26109.1| geranylgeranyl pyrophosphate synthase [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 287

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIEC 81
            L +++  +   H +   +     L GGK+ R  L+    + + V +   A     A+E 
Sbjct: 14  YLKESSPKIPNFHPNYENALWEIVLNGGKRFRPKLLLSIVASYKVENVKLAFAPALALEI 73

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP+MDN   RRG  T+H +YDE  AI+AG+GL T AF +I++ K + K  
Sbjct: 74  LHTYSLIHDDLPAMDNAPFRRGCVTLHKKYDEALAILAGDGLNTQAFYLIATSKLKPKIK 133

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM 199
           I+    LS   N G+ GM+ GQ LD   E   +   Q+ +I   KT  L+  + E GA++
Sbjct: 134 IKLIESLSY--NGGIYGMVLGQALDCHFEGEKLPLEQLRVIHLNKTAKLIAASFEMGAMI 191

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A   +  +  L   G +LG+ FQ+ DD++D  +
Sbjct: 192 AECDKKTRRSLYQLGLDLGLFFQIRDDVIDSTQ 224


>gi|227893300|ref|ZP_04011105.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047]
 gi|227864880|gb|EEJ72301.1| geranyltranstransferase [Lactobacillus ultunensis DSM 16047]
          Length = 289

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 15/221 (6%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVG 76
           ++DD L +  +      + ++   + Y+++ GGK++R  L     ++         +R+ 
Sbjct: 14  VIDDYLAKHLA--DEVEDPKISQIMAYSVMAGGKRLRPLLFLATLNVLGKKIEEPEIRIA 71

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+    
Sbjct: 72  CGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGSN 131

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCF 191
                  ++L   +T  +G  GM+GGQ LDI          D   +  ++ +KTG L+  
Sbjct: 132 S------AKLAAMITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQA 185

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + E  A+ A A+  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 186 SVEMAAVYARATDIEQVKLVDFAKAFGRSYQIYDDLVDVVE 226


>gi|260893125|ref|YP_003239222.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4]
 gi|260865266|gb|ACX52372.1| Trans-hexaprenyltranstransferase [Ammonifex degensii KC4]
          Length = 320

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 17/227 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L+E+  R++  +  ++              L  A  + L  GGK++R  L   CA     
Sbjct: 8   LREDLARVEEEIRRVVA--------GAPPPLREAALHLLAAGGKRLRPALALLCAHFGRY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    L + AA+E IH  +L+HDD+  +D   +RRG PTVH ++   TAI  G+ L   A
Sbjct: 60  SLERVLPLAAAVELIHMATLVHDDV--IDGAEMRRGIPTVHARWGPETAIKVGDVLFAQA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E++SS +        +   LS+            Q  +         + F   + KT  
Sbjct: 118 IELVSSYEDSAVARKLAATCLSMCTGE------FAQERESYSPQQSVWRYFRRIRRKTAL 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            +  ACE GA +  A     + LR +G  LG+ FQ+ DD+LD   + 
Sbjct: 172 FIGAACELGARVCEAPLVVCQALRQYGLALGMAFQVVDDVLDLVAEE 218


>gi|297537809|ref|YP_003673578.1| polyprenyl synthetase [Methylotenera sp. 301]
 gi|297257156|gb|ADI29001.1| Polyprenyl synthetase [Methylotenera sp. 301]
          Length = 304

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 78/233 (33%), Positives = 125/233 (53%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
              +       RI+ +L++ L  T          RL SA+RY AL GGK++R+ L    +
Sbjct: 14  DFSAWAAAKQARIEDVLNNALPSTN-----VAPQRLHSAMRYSALEGGKRVRALLCYAAS 68

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +   A     A+E IH YSL+HDD+P MD+  +RRGKP+ H QYD+ TA++ G+ 
Sbjct: 69  ELCKTDAKVADAAACAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 128

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L + AFE++S      + N +  ++  L    G  GM GGQ +D+    + + +T +  +
Sbjct: 129 LQSLAFEVLSQANLCTQTNHQVSMLNILAKASGSTGMAGGQAIDLASVGKMLSQTDLEQM 188

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++KTGAL+  A   G I  +    +   +  + +N+G+ FQ+ DD+LD E D
Sbjct: 189 HQLKTGALIQAAVLLGGI--NGEIEKTAAISTYAKNIGLAFQVIDDILDVEAD 239


>gi|254374334|ref|ZP_04989816.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548]
 gi|151572054|gb|EDN37708.1| hypothetical protein FTDG_00500 [Francisella novicida GA99-3548]
          Length = 325

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YSGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++   QN     + +R +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGVISLDKQNYANYQDNIRNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|144900826|emb|CAM77690.1| geranyltranstransferase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 296

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)

Query: 30  HMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            +      R+  A+RY AL GGK++R FL  + ASLFNV+   ALRVG A+E +HCYSLI
Sbjct: 25  PVPDGPERRVHDAMRYSALDGGKRLRPFLTVQAASLFNVSPAAALRVGCALEMVHCYSLI 84

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +RRG+PT H Q+DE TA++AG+ L + AFE++++  T     +R +L+ 
Sbjct: 85  HDDLPCMDDDDLRRGRPTCHRQFDEATALLAGDALQSRAFEVLAAESTHPDPAVRCELVW 144

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L H  G  GM+GGQM+D+Q     +D   +  +Q+MKTG L+ FACE+GAI+  A  + 
Sbjct: 145 QLAHAAGGMGMVGGQMVDLQAAQLTMDMADITRLQQMKTGRLIGFACEAGAILGKAPSSL 204

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +  L+ +  +LG+ FQ+ADDLLD + D   + KK
Sbjct: 205 RLALKNYAHDLGLAFQIADDLLDVQGDEMQVGKK 238


>gi|300811648|ref|ZP_07092124.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497349|gb|EFK32395.1| polyprenyl synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 287

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +  +E   +   I++D L    +  +   + R    + Y+++ GGK++R  L        
Sbjct: 2   TTFKEFQAKYTPIINDFLEGQLA--KESDDPRFAEIMAYSVMAGGKRLRPLLFLATLDAL 59

Query: 66  NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            V      ++    IE IH YSLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L 
Sbjct: 60  GVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQ 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181
               + I+  +   K      L+  +T  +G +GM+ GQ LDI    +E   E  +  ++
Sbjct: 120 PLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHME 173

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +KTG L+  + +    +A     + ++   F ++ G  +QL DDL+D  E
Sbjct: 174 WLKTGCLILASVQMATALAACPNQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224


>gi|262375796|ref|ZP_06069028.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
 gi|262309399|gb|EEY90530.1| geranyltranstransferase [Acinetobacter lwoffii SH145]
          Length = 302

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 80/205 (39%), Positives = 115/205 (56%), Gaps = 7/205 (3%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            + L SA+ +A+ LGGK++R  L    A+L  N N     R   AIE IHCYSL HDDLP
Sbjct: 33  PEPLRSAVHHAVMLGGKRVRPALCYATAALKPNQNSAAVRRAAVAIEFIHCYSLAHDDLP 92

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH- 152
            MDN  +RRG+PT H+ Y E TA++AG+ L + AFEI+ S        + + ++L     
Sbjct: 93  CMDNDLLRRGQPTCHVAYGEDTALLAGDILQSMAFEILGSRLFDQGPAVEASIVLKQMQI 152

Query: 153 -NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKE 208
                  M+ GQ+LD+Q E   ID+  +  I + KTGAL+  A    A+ +   +     
Sbjct: 153 LATASSKMVNGQVLDLQSEGKKIDQQALETIHRNKTGALISAAIMMAAVTIFDGTDLAIP 212

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
           +LR FG+ +G+ FQ+ DD+LD   D
Sbjct: 213 KLREFGQAIGLAFQVQDDILDIISD 237


>gi|5712726|gb|AAD47627.1| octylprenyl diphosphate synthase-like protein [Pseudomonas sp.
           BG33R]
          Length = 322

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRETA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ + + +FE++    +     +    +LS    I  +G +  Q+  +
Sbjct: 100 NAMWGNAPSVLVGDFMYSRSFEMMVELGS-----MPVMKILSQATRIIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT      +  S A +  A+  + E LR FG+NLG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMFFEASTHSAAALCGATAEQAEALRTFGDNLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD + D  
Sbjct: 214 LDYKGDAE 221


>gi|261417952|ref|YP_003251634.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y412MC61]
 gi|319767236|ref|YP_004132737.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y412MC52]
 gi|261374409|gb|ACX77152.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y412MC61]
 gi|317112102|gb|ADU94594.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y412MC52]
          Length = 320

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     +   L  +  +    +++++     +A+     GGK+IR   V   A   + 
Sbjct: 2   KLKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+  ++    A+  G+ L   +
Sbjct: 62  DFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYLFARS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++   +     + ++ ++ + H          Q+ D               + KT  
Sbjct: 120 LERMAELDSPRAHQVLAKTIVEVCHGEI------EQIKDKYRFDQPLRTYLRRIRRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C+ GA+ A A +    RL  FG  +G+ FQ+ DD+LD   
Sbjct: 174 LIAASCQLGALAAGAPEAVANRLYWFGHYVGMSFQITDDILDFTG 218


>gi|325685896|gb|EGD27962.1| farnesyltranstransferase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 296

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +  +E   +   I++D L    +  +   + R    + Y+++ GGK++R  L        
Sbjct: 11  TTFKEFQAKYTPIINDFLEGQLA--KESDDSRFAEIMAYSVMAGGKRLRPLLFLATLDAL 68

Query: 66  NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            V      ++    IE IH YSLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L 
Sbjct: 69  GVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQ 128

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181
               + I+  +   K      L+  +T  +G +GM+ GQ LDI    +E   E  +  ++
Sbjct: 129 PLGIQWIAQAEHNWK------LIEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHME 182

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +KTG L+  + +    +A     + ++   F ++ G  +QL DDL+D  E
Sbjct: 183 WLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 233


>gi|90411954|ref|ZP_01219962.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
           3TCK]
 gi|90327212|gb|EAS43584.1| putative octaprenyl-diphosphate synthase [Photobacterium profundum
           3TCK]
          Length = 323

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A          +   A +E IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLVVLAARALGYQGDKHITAAAFVEFIHTATLLHDDV--VDESDMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDVMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+  +S   +  L+ +G  LG  FQL DD+L
Sbjct: 155 DPNTTEDNYMQVIYSKTARLFEAATQISAIITESSTEVEVALQDYGRYLGTAFQLIDDVL 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYVAD-GKE 222


>gi|314933695|ref|ZP_07841060.1| geranyltranstransferase [Staphylococcus caprae C87]
 gi|313653845|gb|EFS17602.1| geranyltranstransferase [Staphylococcus caprae C87]
          Length = 288

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 86/223 (38%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 18  TILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
            +++++       +   H N  L  ++ Y+L  GGK+IR  L+    ++ N ++   L+ 
Sbjct: 3   NLIEEVNTNLKQAIPESHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNEDYHKGLQS 62

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E IH YSLIHDDLP+MD+   RRGK T H  Y E  AI+AG+ LLT AFE++S+  
Sbjct: 63  ALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDD 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193
             ++DN++ +++  L+   G  GM+GGQ LD+Q E   +D   +  I K KTGAL+ FA 
Sbjct: 123 L-IEDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAV 181

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   +A   Q     L  F E+LG++FQ+ DDLLD   D  K
Sbjct: 182 MAAVDIAQVDQKTSHNLNEFSEHLGLMFQIKDDLLDVYGDEKK 224


>gi|300703492|ref|YP_003745094.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum CFBP2957]
 gi|299071155|emb|CBJ42469.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum CFBP2957]
          Length = 299

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +     R ++ L+  L       ++    RL +A+RYA LG GK++R  LV   
Sbjct: 2   SDFAQWMASVVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLVHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L   +      V  A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L T AF +++     +    R+ L+  L    G  GM GGQ +D+Q     + +  +  
Sbjct: 117 ALQTQAFVVLAELGA-VSSVTRAALVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+ A  +    E++  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNATALEQVDAYAGAVGLAFQVVDDILDVTADTA 231


>gi|291279049|ref|YP_003495884.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1]
 gi|290753751|dbj|BAI80128.1| octaprenyl-diphosphate synthase [Deferribacter desulfuricans SSM1]
          Length = 327

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 17/229 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+++ K ++   D+LL    S +Q  +         Y    GGK++R   +   + L   
Sbjct: 13  LKDDIKSVE---DELLKNLDSEVQMVN-----EVASYVFKSGGKRLRPVFLILSSKLSGY 64

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               ++ +   +E IH  +L+HDD+  +D    RRGK   +  +     ++ G+ L + A
Sbjct: 65  EGNRSIVISGVVEYIHTATLLHDDV--IDGAMYRRGKKAANRVFGNDITVLCGDFLYSRA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F  +         +   Q++L+       +G +  Q++   +  +       I   KT  
Sbjct: 123 FVNLVKDG-----DPEVQMILANAAKTMSEGEVF-QLVKTANFDLTMEDYLKIIFSKTAI 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L    CE GA+++ + ++++E LR +G  +G+ FQ++DD+LD   D  K
Sbjct: 177 LFSSCCEIGAVLSKSDKDKRENLREYGRLIGLAFQMSDDILDYLGDENK 225


>gi|73662585|ref|YP_301366.1| heptaprenyl diphosphate syntase component II [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|72495100|dbj|BAE18421.1| putative heptaprenyl diphosphate syntase component II
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 317

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 19/225 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLT 71
           K+I+  L+  +         + +D++L A  + L   GGK++R   V   +      +  
Sbjct: 11  KKIEKRLEQSI---------KSHDKVLEAASHHLFSSGGKRVRPAFVILSSQFGKEMNED 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             RV   +E IH  +L+HDD+  +D    RRG  T+  ++D+ TAI+ GN LL    E I
Sbjct: 62  VYRVAVTLELIHMATLVHDDV--IDKSDKRRGSLTISKKWDQNTAILTGNFLLARGLEHI 119

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S+ +       R   ++S        G L  Q  D  +     T        KT  L+  
Sbjct: 120 SNIEAN-----RVHAVISRAIVEVCMGELY-QFQDQFNGHQTITNYLRRINRKTALLIQL 173

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + E GAI + A       L+  G  +G+ FQ+ DD+LD      K
Sbjct: 174 STEVGAITSGADAKTVHNLKMIGHYIGMSFQIVDDILDFTSTEKK 218


>gi|304570553|ref|YP_266034.2| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 290

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 88/227 (38%), Positives = 135/227 (59%), Gaps = 6/227 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q    RI     D  L     ++ Q    L++A+ Y L  GGKKIRS ++ +  ++F +
Sbjct: 1   MQNKLARIAK---DTNLFLKQFIKGQKRTELIAAMEYGLFPGGKKIRSKILIDIGAIFKI 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N+ T + +GAA+ECIH YSLIHDDLP MD+  IRRGK + HI++ E TA++AGN LLT A
Sbjct: 58  NYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIRRGKISTHIKFGESTAVLAGNSLLTMA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           FEI+ S   ++ + I+  L+  L+   G  G+ GGQ LD+  E   + ++++  ++  KT
Sbjct: 118 FEILVSSSLKINEKIKVDLVKKLSETSGHLGIAGGQYLDLSFEKKKVSKSKIIDMEIKKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L  F C    I+   S  + +     G N+G++FQ+ADDL+D + 
Sbjct: 178 GKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIGLLFQIADDLIDFKG 224


>gi|303258213|ref|ZP_07344220.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47]
 gi|302858966|gb|EFL82050.1| octaprenyl-diphosphate synthase [Burkholderiales bacterium 1_1_47]
          Length = 326

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 17/227 (7%)

Query: 7   SKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           + + E+   +D  ++DDL  Q+   +  + +D +++A      GGK++R  ++   A   
Sbjct: 13  APISEDLLAVDREVIDDL--QSDIPLIKKISDYIVTA------GGKRMRPIVLMLIARAL 64

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  + +   IE +H  SL+HDD+  +D   +RRGKPT   ++    AI+ G+ + +
Sbjct: 65  GYQGKEHIFLATMIEYVHTASLLHDDV--VDESDLRRGKPTAGFKWGNAAAILTGDFMYS 122

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AF+++   +     N+R   +++   N   +G +  Q+L+I D  +DE + F + + KT
Sbjct: 123 RAFQLMVRTQ-----NLRICEIVAGAVNRVSEGEVI-QLLNIHDTTLDEARYFDVIERKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L   A    +++A AS+  ++++  +   LG  FQ+ DD+LD   
Sbjct: 177 GVLFEAAARMASVVAGASKEVEDKMAEYALCLGRAFQIIDDVLDYTG 223


>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
 gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
 gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 303

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237


>gi|121602666|ref|YP_988702.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
 gi|120614843|gb|ABM45444.1| polyprenyl synthetase [Bartonella bacilliformis KC583]
          Length = 338

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMITLAAAHMFGYQGDEHIKLATAVEFMHTATLLHDDV--VDESNLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+I+   ++     + +  +LS    +  +G +  Q+    
Sbjct: 115 MIWGNQASVLVGDFLLGQAFKIMVDARS-----MEALAILSNAAAVIAEGEVM-QLAAAN 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   D +    I   KT AL   A E G I+A     E+  LR +G +LG+ FQL DD L
Sbjct: 169 NIENDISNYLKIINAKTAALFSAAAEVGPIIAGYGCEERSALRKYGTSLGLAFQLIDDAL 228

Query: 229 DCEED---LPK 236
           D   D   L K
Sbjct: 229 DYSGDAQHLGK 239


>gi|319778972|ref|YP_004129885.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
 gi|317108996|gb|ADU91742.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
          Length = 321

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 110/236 (46%), Gaps = 18/236 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            +   + E+   +D ++   L      ++T   + ++SA      GGK+IR  ++   + 
Sbjct: 5   AIFQPISEDMSAVDKVIRSRLNSEVVLIRTIG-EYIISA------GGKRIRPAMLLMMSK 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                      + A IE IH  +L+HDD+  +D   +RRG  T +  +    +++ G+ L
Sbjct: 58  ALGYEGSLHHLMAAVIEFIHTSTLLHDDV--VDESDMRRGSATANAVFGNAASVLVGDYL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + +FE++        D++R   ++S    +  +G +  Q+L++ D  +D  +   + K 
Sbjct: 116 YSRSFEMMVEA-----DSMRIMQIMSEATTVIAEGEVL-QLLNVHDPNVDFDRYMDVIKS 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L   A    A++A A    +++   +G ++G  FQ+ DD+LD      DL K
Sbjct: 170 KTAKLFEAATRVAAVLAGADDAVEQKAALYGTHVGTAFQVIDDVLDYSGSAEDLGK 225


>gi|238854801|ref|ZP_04645131.1| geranyltranstransferase [Lactobacillus jensenii 269-3]
 gi|260664032|ref|ZP_05864885.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           SJ-7A-US]
 gi|282933879|ref|ZP_06339227.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
 gi|238832591|gb|EEQ24898.1| geranyltranstransferase [Lactobacillus jensenii 269-3]
 gi|260561918|gb|EEX27887.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           SJ-7A-US]
 gi|281301968|gb|EFA94222.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
          Length = 288

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 76/232 (32%), Positives = 119/232 (51%), Gaps = 18/232 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALL-GGKKIRSFLVTECASL 64
           ++     K+   I+D  L Q   H+ ++  D+     + Y+++ GGK++R  L       
Sbjct: 2   TEFTNFYKKYQPIIDHYLEQ---HLASEIEDKKFSQIMAYSVMAGGKRLRPLLFLATLIS 58

Query: 65  FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                +   +RV   IE IH YSLIHDDLP+MDN   RRG  T H ++ E  AI+AG+ L
Sbjct: 59  LGKEINEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGDAL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQ--VF 178
           L    E I+S K        ++++  + + IG  GM GGQ LDI    +E + E    + 
Sbjct: 119 LPMGLEWIASAKN-------AEMVAVMANAIGPNGMAGGQYLDIDSTNNEAVKEDNNFIN 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            ++ +KTG L+  + E   I A+A+   ++ L  F  N G  +Q+ DDL+D 
Sbjct: 172 RMEWLKTGCLIKASVELATIYANANDLLRKNLVDFSANFGRAYQIYDDLVDV 223


>gi|194016766|ref|ZP_03055379.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
           ATCC 7061]
 gi|194011372|gb|EDW20941.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
           ATCC 7061]
          Length = 320

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 13/233 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL+     ++  +D +  +    +++ +   L  A  + L  GGK+IR   V       +
Sbjct: 2   KLKAMISFLNHDIDIIEKELEQTVRSDYA-LLSEAGLHLLQAGGKRIRPVFVLLSGMFGD 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +      V  A+E IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +   
Sbjct: 61  YDINKIKYVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMFAR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           + E ++     +   I S++++ L            Q+ D  +   +        K KT 
Sbjct: 119 SLEYMTKINHPMAHEILSKMVVELCLGEI------EQVKDKYNMDQNLRTYLRRIKRKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            L+  +C+ GAI A   +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 173 LLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGK 225


>gi|187931635|ref|YP_001891619.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712544|gb|ACD30841.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 325

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++   Q+  +   R++ +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|218960663|ref|YP_001740438.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase)
           (Farnesyltranstransferase) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729320|emb|CAO80231.1| Geranylgeranyl pyrophosphate synthetase homolog (GGPP synthetase)
           (Farnesyltranstransferase) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 296

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 133/238 (55%), Gaps = 13/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   ++E  + ++ ILD  L +       ++   L  A+RY++  GGK++R +L      
Sbjct: 7   LKKDMKEKQELVNIILDRFLPRKD-----EYPKDLHKAMRYSVFAGGKRLRPYLTMTAFE 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +FN N      V A IE IH YSLIHDDLP +DN   RRGK + H  + E  A++AG+ L
Sbjct: 62  MFNSNIELITPVAAGIEMIHTYSLIHDDLPDIDNDDFRRGKKSCHTIFGEGVALLAGDAL 121

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           L  AFE+I+    +L   +R Q +  L   +G++G++ GQM+DI+ E   +D+  +  I 
Sbjct: 122 LLSAFELIT--LAELDAKLRVQFVHELAKEVGIKGLIAGQMVDIESEGKKVDKKTLHYIH 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + KT  L+  +   GA+   A + E + L  +G+ +G++FQ+ DDLLD E    +L K
Sbjct: 180 ENKTARLINLSLRFGALAGEAKEEELKILDEYGKLIGLVFQIVDDLLDIEGTQEELGK 237


>gi|117617957|ref|YP_855472.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559364|gb|ABK36312.1| octaprenyl-diphosphate synthase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 323

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 8/183 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L    A          L++ A IE IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 42  AGGKRMRPMLTVMAARALGYEGEDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +F+++S        N+R   +LS   N   +G +  Q+++ 
Sbjct: 100 NALFGNAASVLVGDYLYSRSFQMMSELS-----NLRVMEILSDATNTIAEGEVL-QLMNC 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     +   KT  L   A    A++ H  +  ++ +  +G+ LG  FQ+ DD+
Sbjct: 154 NDPDTTEESYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDV 213

Query: 228 LDC 230
           +D 
Sbjct: 214 MDY 216


>gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
 gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
          Length = 280

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 100/207 (48%), Gaps = 6/207 (2%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
                 RL  A+ Y+L  GGK+IR  L  E A L  V       +  A+E +H  SLIHD
Sbjct: 9   PDNVPPRLWEAMCYSLEAGGKRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHD 68

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLML 148
           DLP MDN  +RRGKPT H  + E  A++AG+ LL + F+         +++     + M 
Sbjct: 69  DLPCMDNDSLRRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRAME 128

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
                +G QGM GGQ LD   +     D   V  +   KT AL+  +   G  +      
Sbjct: 129 LFASALGPQGMCGGQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLGERGDA 188

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
             ERL  +G  LG+ FQ+ADDLLD   
Sbjct: 189 LTERLDEYGRRLGLAFQIADDLLDATA 215


>gi|256851326|ref|ZP_05556715.1| geranylgeranyl diphosphate  synthase [Lactobacillus jensenii
           27-2-CHN]
 gi|260660750|ref|ZP_05861665.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           115-3-CHN]
 gi|282933229|ref|ZP_06338616.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
 gi|297206196|ref|ZP_06923591.1| geranyltranstransferase [Lactobacillus jensenii JV-V16]
 gi|256616388|gb|EEU21576.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           27-2-CHN]
 gi|260548472|gb|EEX24447.1| geranylgeranyl diphosphate synthase [Lactobacillus jensenii
           115-3-CHN]
 gi|281302733|gb|EFA94948.1| geranyltranstransferase [Lactobacillus jensenii 208-1]
 gi|297149322|gb|EFH29620.1| geranyltranstransferase [Lactobacillus jensenii JV-V16]
          Length = 288

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 20/236 (8%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
              +  Q+    ID  L+  L           + +    + Y+++ GGK++R  L     
Sbjct: 3   DFTNFYQKYQPIIDHYLEQHLSSEI------EDKKFSQIMAYSVMAGGKRLRPLLFLATL 56

Query: 63  SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                      +RV   IE IH YSLIHDDLP+MDN   RRG  T H ++ E  AI+AG+
Sbjct: 57  ISLGKEITEKEIRVACGIELIHTYSLIHDDLPAMDNDDYRRGMLTSHKKWGEAEAILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ----- 176
            LL    E I+S +        ++++  + + IG  GM GGQ LDI     D  +     
Sbjct: 117 ALLPMGLEWIASAEN-------AEMVAVMANAIGPNGMAGGQYLDIDSTNNDAVKEDNNF 169

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  ++ +KTG L+  + E   I A A    +++L  F  N G  +Q+ DDL+D  +
Sbjct: 170 INRMEWLKTGCLIKASVEIATIYAKADDLSRKKLVDFSANFGRAYQIYDDLVDVVQ 225


>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
          Length = 214

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 6/163 (3%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL+++FE ++     + 
Sbjct: 1   EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESG 196
            +   + +  L  +IG +G++ GQ++DI  E + +     +  I   KT AL+  A   G
Sbjct: 61  PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           AI+   +  E E+LR F   +G++FQ+ DD+LD     ++L K
Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGK 163


>gi|146329907|ref|YP_001209557.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A]
 gi|146233377|gb|ABQ14355.1| geranyltranstransferase [Dichelobacter nodosus VCS1703A]
          Length = 280

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 18/228 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
           L     R++  L+  L    S         L  A+RY+ L  GK++R+ L+   A  F++
Sbjct: 3   LNNYRDRVEHALERALPHDES--------LLTKAMRYSTLNAGKRLRAALIYAVAEDFSL 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                     A+ECIH YSLIHDDLP+MDN  +RRGK + H  +DE TAI+AG+ L T A
Sbjct: 55  PLSLVDNAACALECIHAYSLIHDDLPAMDNDDLRRGKASCHKAFDEATAILAGDALNTLA 114

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185
           F +++  +      IR     +         M+ GQ LD+      ID  ++ +I + KT
Sbjct: 115 FALLARDEKNGLAQIRCLSAAAGA-------MVCGQSLDMIYTGTAIDVQKLQIIHQKKT 167

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  A   GA+ +    + + +L   GE++GI +Q+ DD+LD   D
Sbjct: 168 GALLTAALHLGALPSPDYAHYQTQLTAIGEHIGIAYQIIDDMLDATSD 215


>gi|116627949|ref|YP_820568.1| geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus LMD-9]
 gi|116101226|gb|ABJ66372.1| farnesyl-diphosphate synthase [Streptococcus thermophilus LMD-9]
 gi|312278537|gb|ADQ63194.1| Geranyltranstransferase, farnesyl diphosphate synthase
           [Streptococcus thermophilus ND03]
          Length = 290

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 82/228 (35%), Positives = 127/228 (55%), Gaps = 10/228 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-H 69
             K+ID  + D   +    + +     L+SAI Y++  GGK+IR  +  +    F +   
Sbjct: 3   KLKKIDAAIRDFYQKKTPPVSSD----LISAILYSVDSGGKRIRPLIFLDLLEGFGLELT 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            +   + A++E IH  SLIHDDLP+MD+   RRG+ T H ++DE TAI+AG+ L    F 
Sbjct: 59  PSHFDIAASLEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFA 118

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187
           +++   T+L   IR QL+ +L+H  G  GM+GGQMLD++ E +  D +Q+  I + KTG 
Sbjct: 119 LVAQ--TELSAEIRVQLIHALSHASGTFGMVGGQMLDMKGEGLELDLSQLAKIHENKTGK 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+ F   +  I+A       E L+  G  +G+ FQ+ DD+LD   D  
Sbjct: 177 LLTFPFVAAGIVAQQEDRVMENLQEAGRLIGLAFQVRDDILDVTADFE 224


>gi|317050825|ref|YP_004111941.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
 gi|316945909|gb|ADU65385.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
          Length = 326

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 20/241 (8%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   + + L+     I+  +   L      +Q        S       GGK+IR  LV 
Sbjct: 1   MNIADVYALLKPQVAEIEQEIQSNLTSRVRRVQEVGEYIFQS-------GGKRIRPLLVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             + L   +   A+++G  IE IH  +L+HDD+  +D   +RRG+ + + ++     I+ 
Sbjct: 54  LTSKLCGGDERRAIKIGGIIEYIHTATLLHDDV--IDEACVRRGRDSANFKFGNEMVILV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + AF+++ +       + R Q  LS    +  +G +  Q++   D  +     F 
Sbjct: 112 GDYLYSKAFQVLVADG-----DPRVQKTLSDVTTLMSEGEVF-QLVKSFDFSVTLEDYFQ 165

Query: 180 IQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           I + KT  L+    + G   A   S+   + L  FG N+G+ FQL DD+LD   D   L 
Sbjct: 166 IIEHKTAILIAACAKCGGYTAPDLSEEMADALWDFGYNIGMAFQLIDDILDYMGDASTLG 225

Query: 236 K 236
           K
Sbjct: 226 K 226


>gi|229592556|ref|YP_002874675.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25]
 gi|229364422|emb|CAY52224.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens SBW25]
          Length = 322

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRETA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  +
Sbjct: 100 NAMWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMKILSQATRIIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +  A+  + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCGATVEQAEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|254369351|ref|ZP_04985363.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122301|gb|EDO66441.1| hypothetical protein FTAG_00322 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 325

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++   Q+  +   R++ +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|302877611|ref|YP_003846175.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
 gi|302580400|gb|ADL54411.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
          Length = 320

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  FN        + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 41  GGKRLRPALVVLSAHAFNYTGEHHHELAAVVEFIHTATLLHDDV--VDESGLRRGRETAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++    +     +R    L+   N+  +G +  Q+L+  
Sbjct: 99  ALFGNAASVLVGDFLYSRAFQMMVEVGS-----MRVMQTLADATNVIAEGEVL-QLLNCN 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +D      +   KT  L   A   GAI+A  S  ++     +G +LG  FQL DD+L
Sbjct: 153 DADVDAENYMRVIHYKTAKLFEAAMRLGAILAKTSSEDEAAAATYGMHLGTAFQLIDDVL 212

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 213 DYSADEA 219


>gi|169794893|ref|YP_001712686.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii AYE]
 gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
 gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB307-0294]
 gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB056]
 gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB058]
 gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB059]
 gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
 gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
 gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii AYE]
 gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
 gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
 gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter baumannii AB307-0294]
 gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
 gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
          Length = 303

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237


>gi|121534144|ref|ZP_01665969.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1]
 gi|121307247|gb|EAX48164.1| Trans-hexaprenyltranstransferase [Thermosinus carboxydivorans Nor1]
          Length = 322

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + + ++ +   ++  L +++      + TQ    LL A      GGK++R  L   CA  
Sbjct: 6   MFALVEADLLAVEQALSEIIHSPVDQL-TQVGRHLLQA------GGKRLRPALYLLCAKS 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V   + L +  AIE IH  +L+HDD+  +DN   RRG PT + ++    ++++G+ L 
Sbjct: 59  RQVETASLLPIAVAIEMIHMATLVHDDV--IDNAATRRGLPTANSRWGNHVSVLSGDFLF 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             AF  ++   T     I + ++ S+     L      Q+ D       E    +    K
Sbjct: 117 AKAFSTVAKHATPAMLRILTDVVCSMCEGEIL------QIRDTFSAEQSEEDYLVRIAKK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T   +  +CE G + A  + +E   LR +G  +G+ FQ+ DD+LD   
Sbjct: 171 TADFIAASCELGGLSAGLAPDEVAALRRYGHAVGMAFQITDDILDITA 218


>gi|254488785|ref|ZP_05101990.1| geranyltranstransferase [Roseobacter sp. GAI101]
 gi|214045654|gb|EEB86292.1| geranyltranstransferase [Roseobacter sp. GAI101]
          Length = 301

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 92/240 (38%), Positives = 137/240 (57%), Gaps = 12/240 (5%)

Query: 3   GGLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
             +P + +   +  +  L    DL      H     + ++  A+RYA+ GGK +R+FLV 
Sbjct: 4   FDIPMQAELTRRPFEEALGKAADLATGQVLHGLGGVDGQIAEAMRYAVTGGKGLRAFLVI 63

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A L  V    A     AIE +H YSL+HDD+P MDN  +RRG+PTVH+++DEVTA++A
Sbjct: 64  ESARLHGVMDAQAAPAAGAIEALHAYSLVHDDMPCMDNDDLRRGQPTVHVKWDEVTAVLA 123

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175
           G+ L   AFE+ +   T   D  R  L+  L H  G++GM+GGQ LDI  E     +   
Sbjct: 124 GDALQALAFELAAQ--TGCSDAGRVALVAGLAHASGVRGMVGGQALDIAAESASVPLTLD 181

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q+  +Q  KTGAL+ +A  +G +MA   +++   L+ +  +LG+ FQ+ADD+LD E D  
Sbjct: 182 QITTLQAGKTGALIEWAATAGPVMA---RDDPRPLQRYARDLGLAFQIADDILDIEGDAE 238


>gi|256843404|ref|ZP_05548892.1| geranylgeranyl diphosphate  synthase [Lactobacillus crispatus
           125-2-CHN]
 gi|293380304|ref|ZP_06626378.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
 gi|256614824|gb|EEU20025.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
           125-2-CHN]
 gi|290923119|gb|EFE00048.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
          Length = 289

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 17/222 (7%)

Query: 19  ILDDLLLQTASHMQTQHND-RLLSAIRYALLGG-KKIRSFLVTECASLFNVN-HLTALRV 75
           ++DD L   A H+ ++  D ++   + Y+++GG K++R  L     +          +R+
Sbjct: 14  VIDDYL---AKHLASEVEDQKISQIMAYSVMGGGKRLRPLLFLATLNALGRKIEEPEIRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190
                   ++L+  +T  +G  GM+GGQ LDI          D   +  ++ +KTG L+ 
Sbjct: 131 KS------AKLVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQ 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 185 ASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVE 226


>gi|66043965|ref|YP_233806.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
           B728a]
 gi|289674837|ref|ZP_06495727.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
           FF5]
 gi|63254672|gb|AAY35768.1| Trans-hexaprenyltranstransferase [Pseudomonas syringae pv. syringae
           B728a]
 gi|330941237|gb|EGH44102.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330954228|gb|EGH54488.1| trans-hexaprenyltranstransferase [Pseudomonas syringae Cit 7]
 gi|330977523|gb|EGH77469.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 322

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A + +A Q + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|295398947|ref|ZP_06808929.1| heptaprenyl diphosphate synthase component II [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110446|ref|YP_003988762.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y4.1MC1]
 gi|294978413|gb|EFG54009.1| heptaprenyl diphosphate synthase component II [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215547|gb|ADP74151.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           Y4.1MC1]
          Length = 321

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 8/225 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     ++  L  +  +    +++ +     +A+     GGK+IR   V   A     
Sbjct: 2   KLKAMYSFLNADLRAVEKELEETVRSDYAQLSEAALHLLQAGGKRIRPVFVLLAAKFGTY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V  A+E IH  SL+HDD+  +D+  +RRG+ T+  ++    A+ AG+ +   +
Sbjct: 62  DIERVKHVAVALELIHMASLVHDDV--IDDAELRRGRQTIKAKWSNRFAMYAGDYMFARS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E+++  +  L   I +  ++ +            Q+ D      +        K KT  
Sbjct: 120 LELMTRLENPLAHRILANTIVEVCRGEI------EQIKDKYRFDQNLRCYLRRIKRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C+ GAI A+A++   +RL  FG  +G+ FQ+ DD+LD   
Sbjct: 174 LIAASCQLGAIAANAAKRTADRLYLFGYYVGMSFQITDDILDFTG 218


>gi|190570943|ref|YP_001975301.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019458|ref|ZP_03335264.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357215|emb|CAQ54632.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994880|gb|EEB55522.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 328

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 12/232 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTE 60
           L + L ++SK  D +  DLL       +  +++  +L + I   L+  GGKKIR  L+  
Sbjct: 2   LNTDLTKSSKLDDIVSSDLLAMNDFIFKNVNDEGTKLATDITSHLINSGGKKIRPKLIFI 61

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              + N +  + + + A++E IH  +L+HDD+  +D    R G  T +  +   ++I+ G
Sbjct: 62  MCKMLNYSGESRVNIAASVEFIHNATLLHDDV--LDESKARHGVATANKIWGNKSSILVG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LLT AF  +         N+    +LS   N+ ++G +  QM    D        F I
Sbjct: 120 DLLLTLAFRWLIECG-----NLSVLSILSKASNLLVKGEIK-QMTTRFDPNTIRKNYFNI 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT +L     E+ ++++ A+ +E ERLR FG N G+ FQ+ DD+LD   
Sbjct: 174 IGEKTASLFSACSEAASVVSGATSDETERLRNFGFNFGMAFQIIDDVLDYTA 225


>gi|56708131|ref|YP_170027.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670602|ref|YP_667159.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301942|ref|YP_001121911.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|208779313|ref|ZP_03246659.1| polyprenyl synthetase family protein [Francisella novicida FTG]
 gi|224457222|ref|ZP_03665695.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370617|ref|ZP_04986622.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874931|ref|ZP_05247641.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604623|emb|CAG45677.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320935|emb|CAL09060.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049719|gb|ABO46790.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151568860|gb|EDN34514.1| hypothetical protein FTBG_00405 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|208745113|gb|EDZ91411.1| polyprenyl synthetase family protein [Francisella novicida FTG]
 gi|254840930|gb|EET19366.1| polyprenyl synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159332|gb|ADA78723.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 325

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++   Q+  +   R++ +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|146278824|ref|YP_001168983.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145557065|gb|ABP71678.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025]
          Length = 289

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 91/237 (38%), Positives = 135/237 (56%), Gaps = 15/237 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
                L + + R+   LD  L         +    ++ A+RYA+ GGK++R FLV E A 
Sbjct: 2   SFSKALTDAAARVQARLDAALAD-------REELPVVHAMRYAVQGGKRLRGFLVLESAR 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  +    A+   A+IE +H YSL+HDD+P MD+  +RRG PTVH ++DE TA++AG+ L
Sbjct: 55  LHGIVPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179
            T AFE+++ P       +R +L+ +L    G +GM+ GQ LDI  E     +   Q+  
Sbjct: 115 QTLAFELLADPALG-PAEVRIRLVETLAKASGAEGMVLGQALDIAAETAAVPLTLEQITH 173

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +Q  KTGAL+C++ E+GAI+  A       LR +   LG+ FQ+ADD+LD E D  K
Sbjct: 174 LQAGKTGALICWSAEAGAILGQADTG---PLRRYATALGLAFQIADDILDVEGDADK 227


>gi|157374092|ref|YP_001472692.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3]
 gi|157316466|gb|ABV35564.1| trans-hexaprenyltranstransferase [Shewanella sediminis HAW-EB3]
          Length = 323

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLSILAARAIDYKGEAHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++        N+    +L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELG-----NMEVLEVLADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEESYMRVIYCKTAKLFEAATRLAGVLAQSPIEAQNALADYGKFLGTAFQLTDDLL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYTADTE 221


>gi|330886861|gb|EGH20296.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020]
          Length = 296

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + S   ++  R++  L+ L    +  +     +RL  A+RY+++ GGK++R  L      
Sbjct: 2   IASYQAQSQTRVNAALEKLFQAPSPEL-----NRLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE  AI+AG+GL
Sbjct: 57  ALGGVAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGL 116

Query: 124 LTYAFEIISSPKTQLKD-NIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
            + AF  + +P    +D   R Q++    +     G  G      L      +D+  +  
Sbjct: 117 QSLAFTALLAPHLTSRDAETRLQMVNPLAAAAGPAGYGGAGQAIDLGSVGLKLDQAALEY 176

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
           + + KTGAL+  +   GA+ +  A Q   + L+ +   +G+ FQ+ DD+LD E D   L 
Sbjct: 177 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|296535664|ref|ZP_06897840.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957]
 gi|296264015|gb|EFH10464.1| farnesyltranstransferase [Roseomonas cervicalis ATCC 49957]
          Length = 347

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 8/231 (3%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
              L      +   L+    +  + MQ+        A      GGK++R  LV   A L 
Sbjct: 23  EDALTALVSLVQEDLEACNREIIARMQSPVQLIPQLAAHLIAAGGKRLRPLLVLAAARLC 82

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  + + A +E IH  +L+HDD+  +D   +RRG+ + +  +    +++ G+ L  
Sbjct: 83  GYRGQRHVGLAACVEFIHTATLLHDDV--VDESDLRRGQASANAIFGNKASVLVGDFLFA 140

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AF+++++  +     +    +L        +G +  Q++   D    E Q   + + KT
Sbjct: 141 RAFQLMTADGS-----LEVLDILCGASATIAEGEVL-QLVIQNDTSSTEAQYLEVIEGKT 194

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            AL   A   GA++A   + E + L  +G N GI FQL DD LD   +  +
Sbjct: 195 AALFAAATRVGAVVAERPKAEADALEAYGRNFGIAFQLVDDALDYSAEQER 245


>gi|163802656|ref|ZP_02196547.1| malate dehydrogenase [Vibrio sp. AND4]
 gi|159173544|gb|EDP58364.1| malate dehydrogenase [Vibrio sp. AND4]
          Length = 323

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLAILSARALGYHGNGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++   +     I+   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTELGS-----IKILKLMSDAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GAI+  A +N +  L+ +G+ LG  FQL DD++
Sbjct: 155 NPDTTEENYMQVIYSKTARLFESATQIGAILNDAPENVEVALQNYGKFLGTAFQLIDDVM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|313124102|ref|YP_004034361.1| farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280665|gb|ADQ61384.1| Farnesyl-diphosphate synthase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 287

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 13/231 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           +  +E   +   I++D L    +  +   + R    + Y+++ GGK++R  L        
Sbjct: 2   TTFKEFQAKYTPIINDFLEGQLA--KESDDSRFAEIMAYSVMAGGKRLRPLLFLATLDAL 59

Query: 66  NVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            V      ++    IE IH YSLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L 
Sbjct: 60  GVEITEKEVQAACGIELIHTYSLIHDDLPAMDNDDYRRGELTSHKKWGEAEAILAGDALQ 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQ 181
               + I+  +   K      L+  +T  +G +GM+ GQ LDI    +E   E  +  ++
Sbjct: 120 PLGIQWIAQAEHNWK------LVEIITEAVGPKGMVAGQYLDIDTTNNEDSSEEVIDHME 173

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +KTG L+  + +    +A     + ++   F ++ G  +QL DDL+D  E
Sbjct: 174 WLKTGCLILASVQMATALAACPDQQAQKYLAFAKHFGRSYQLYDDLVDIVE 224


>gi|297529620|ref|YP_003670895.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           C56-T3]
 gi|297252872|gb|ADI26318.1| heptaprenyl diphosphate synthase component II [Geobacillus sp.
           C56-T3]
          Length = 320

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL+     +   L  +  +    +++++     +A+     GGK+IR   V   A   + 
Sbjct: 2   KLKAMYSFLSDDLAAVEEELERTVRSEYGPLGEAALHLLQAGGKRIRPVFVLLSARFGHY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V  A+E IH  SL+HDD+  +D+  +RRG+PT+  ++    A+  G+ L   +
Sbjct: 62  DFERIKHVAVALELIHMASLVHDDV--IDDADVRRGRPTIKARWSNRFAMYTGDYLFARS 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++   +     + ++ ++ + H          Q+ D               + KT  
Sbjct: 120 LERMAELDSPRAHQVLAKTIVEVCHGEI------EQIKDKYRFDQPLRTYLRRIRRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C+ GA+ A A +    +L  FG  +G+ FQ+ DD+LD   
Sbjct: 174 LIAASCQLGALAAGAPEAVANQLYWFGHCVGMSFQITDDILDFTG 218


>gi|226946118|ref|YP_002801191.1| trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ]
 gi|226721045|gb|ACO80216.1| Trans-hexaprenyltranstransferase [Azotobacter vinelandii DJ]
          Length = 322

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C +           + AAIE +H  +L+HDD+  +D+  +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGNALGKCDERMRLLAAAIEFLHTSTLLHDDV--VDDSELRRGRSTS 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L    FE++    +     +    ++S    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYARCFEMLVELAS-----MPVMRIMSQATRVIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   A    A +A A+  + E LRCFG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEAASHGAASLAGATSEQAEALRCFGDSLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|288818510|ref|YP_003432858.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
           TK-6]
 gi|288787910|dbj|BAI69657.1| geranylgeranyl pyrophosphate synthase [Hydrogenobacter thermophilus
           TK-6]
 gi|308752100|gb|ADO45583.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 264

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 15/224 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           L+    +I++ L +LL      +       L  A+ Y +   GK+IR   +   ++    
Sbjct: 2   LELWKSQIESRLRELLKPFEPRI-------LYDAMSYYVFQEGKRIRPLFLCAVSNALGG 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N   A+ VG AIE IH YSL+HDDLP++DN   RRGKP+ H+ + E  AI+AG+ LL  A
Sbjct: 55  NLQDAITVGCAIEFIHNYSLVHDDLPALDNDDFRRGKPSCHVLFGEDMAILAGDALLNLA 114

Query: 128 FEIISSPKT--QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
           FE +S+ +    L +     ++  ++ + G QGM+GGQ++D++      +    I   KT
Sbjct: 115 FETLSNRENFISLSEKDLIYIIRLVSESSGFQGMVGGQVMDVKKLGDPWS----ISLKKT 170

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            ++       G I++       E L   G  +G++FQL DD  D
Sbjct: 171 ASMFSAVFACGGIISK-KYERVEYLSKAGTQVGLLFQLIDDYKD 213


>gi|222099500|ref|YP_002534068.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359]
 gi|221571890|gb|ACM22702.1| Geranyltranstransferase [Thermotoga neapolitana DSM 4359]
          Length = 272

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 10/218 (4%)

Query: 21  DDLLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
            + + +    +   H + L   A++Y++  GGK+IR  LV        V     + V  A
Sbjct: 3   KETIERRIEELVKPHFNLLTESAMQYSVTAGGKRIRPLLVLTVGEDIGVEEERLVDVAVA 62

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E  H  SL+HDDLP +DN   RRGKP+ H  Y E  A++AG+GL   AF  I+  +   
Sbjct: 63  VELFHTASLVHDDLPPIDNADFRRGKPSCHRAYGEGIALLAGDGLFFLAFSQIAKVREPK 122

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                S+    L     +      Q     ++ I    V  +   KTGAL  F   +  +
Sbjct: 123 LFEEFSETAYKLLLGEAMDVEFERQ-----EKEISVEMVEKMYSFKTGALFAFCFSAPFL 177

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +        ++L   GE  G+ FQ+ DDL D    L K
Sbjct: 178 LKGLDHTFVKKL---GEKFGVAFQIYDDLKDVLGSLEK 212


>gi|300024374|ref|YP_003756985.1| polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526195|gb|ADJ24664.1| Polyprenyl synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 342

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 15/232 (6%)

Query: 9   LQENSKRIDTIL----DDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLVTEC 61
           L+E  ++++ +L    DDL       +    +D  ++  + + L+  GGK++R  L    
Sbjct: 14  LRETGQKLEPLLALVADDLEAINRIILDKAVSDVEMIPELAHHLIDSGGKRLRPMLALAS 73

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L        +R  +A+E +H  +L+HDD+  +D    RRG+ T  + +    +++ G+
Sbjct: 74  AKLCGYGGNGHIRTASAVEFMHTATLLHDDV--VDESATRRGRKTARMIWGNQASVLVGD 131

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL  AF++     +     +    ++S       +G +  Q+   ++    E     I 
Sbjct: 132 FLLGQAFKMFVDVGS-----LPVLRIMSNAAATIAEGEVM-QLAAAKNTSTTEDDYLAII 185

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             KT AL   A ESGA +      E+  LR +G+NLG+ FQL DD LD   D
Sbjct: 186 NAKTAALFSAAAESGAALTQRPPEEQSALRSYGKNLGLAFQLVDDALDYAGD 237


>gi|167622844|ref|YP_001673138.1| polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
 gi|167352866|gb|ABZ75479.1| Polyprenyl synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 323

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +    + L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSILAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++  K      +    +L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELKC-----LDVLEILADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLADSPIEVQTALAEYGKYLGTAFQLTDDLL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYTADTE 221


>gi|294339015|emb|CAZ87362.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Thiomonas sp. 3As]
          Length = 336

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 20/238 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
             + + + E+ +R+D  +   L    + + T           Y + GG K++R  L+   
Sbjct: 18  HSVFAPITEDMERVDRAIHTHLASEVALINTIGG--------YIVAGGGKRLRPALLLLV 69

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+
Sbjct: 70  SQALGFRGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSNALFGNSASVLVGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + AF+++ S  +     +R   +L+   N+  +G +  Q+L++ D  +DE +   + 
Sbjct: 128 FLYSRAFQMMVSVGS-----MRILDILADATNVIAEGEVL-QLLNMHDPEVDEQRYLQVI 181

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + KT  L   A   GA++A A  N +E +   G + G  FQL DDLLD      +L K
Sbjct: 182 RFKTAKLFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGK 239


>gi|184159332|ref|YP_001847671.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           ACICU]
 gi|332874228|ref|ZP_08442150.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
 gi|183210926|gb|ACC58324.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           ACICU]
 gi|322509243|gb|ADX04697.1| Geranyltranstransferase [Acinetobacter baumannii 1656-2]
 gi|323519272|gb|ADX93653.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737587|gb|EGJ68492.1| polyprenyl synthetase [Acinetobacter baumannii 6014059]
          Length = 303

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237


>gi|52425655|ref|YP_088792.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307707|gb|AAU38207.1| IspA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 358

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 110/223 (49%), Gaps = 12/223 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69
           K I  ++ D + +    +  Q N    L++ + Y ++  GGK+IR  +    A   N   
Sbjct: 39  KTIQALVSDDMQKVNEEILAQLNSDVPLINQLGYYIIHSGGKRIRPMIANLAAKALNYQD 98

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +   A IE +H  +L+HDD+  +D   +RRG PT + ++    +++ G+ + T +F+
Sbjct: 99  NKHITCAAFIEFLHTATLLHDDV--VDESDMRRGNPTANAEFGNAASVLVGDYMHTRSFQ 156

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           +++   +     +R   ++S   N+  +G +  Q+++++D    E     +   KT  L 
Sbjct: 157 MMTELGS-----LRILQVMSAATNVIAEGEV-QQLMNVRDPDTTEQNYMKVIYSKTARLF 210

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + ++ AI+A A    +E L+ +G  LG  FQL DD+LD   
Sbjct: 211 EVSTQTVAILADAGAAIEEGLQNYGRYLGTAFQLVDDILDYSA 253


>gi|71906297|ref|YP_283884.1| polyprenyl synthetase [Dechloromonas aromatica RCB]
 gi|71845918|gb|AAZ45414.1| Polyprenyl synthetase [Dechloromonas aromatica RCB]
          Length = 341

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 18/226 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           K +D ++ D L      ++      + S       GGK++R  LV   A   +       
Sbjct: 34  KAVDAVIRDRLYSDVVLVRQVAEYIISS-------GGKRMRPALVLLAAGALDYQGTRHQ 86

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + AF+++ +
Sbjct: 87  EMAAVVEFIHTATLLHDDV--VDESALRRGRDTANAMFGNAASVLVGDFLYSRAFQMMVA 144

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 DN+R   +LS   N+  +G +  Q+++  D  +DE +   +   KT  L   A 
Sbjct: 145 -----VDNMRVMQVLSDATNVIAEGEVL-QLMNCHDADVDEARYMQVIHYKTAKLFEAAA 198

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + GAI+  A+   ++ L  +G +LG  FQL DD+LD    E D  K
Sbjct: 199 QLGAILGQATPEVEKALTAYGMHLGTAFQLIDDVLDYSGQEADTGK 244


>gi|91794278|ref|YP_563929.1| trans-hexaprenyltranstransferase [Shewanella denitrificans OS217]
 gi|91716280|gb|ABE56206.1| Trans-hexaprenyltranstransferase [Shewanella denitrificans OS217]
          Length = 323

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L               L++ A +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLACRAMGYEGDKHLKLAAIVEFIHTASLLHDDV--VDESLLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       D++    +L+ T N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSLHVLKVLANTTNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A AS  E+  L  +G+ LG  FQL DDLL
Sbjct: 155 DPNTTEANYMRVIYCKTAKLFEAATLLAGVLAGASVAEQIALGEYGKFLGTAFQLTDDLL 214

Query: 229 DCEE---DLPK 236
           D      +L K
Sbjct: 215 DYTASSDELGK 225


>gi|319404558|emb|CBI78164.1| octaprenyl-diphosphate synthase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 337

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 56  GGKRIRPMITLATAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESALRRGKSTAR 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +I+ G+ LL  AF+++    +     + +  +LS    I  +G +  Q+   +
Sbjct: 114 IIWGNQASILVGDFLLGQAFKMMVDVGS-----LDALSVLSNAAAIIAEGEVM-QLSAAK 167

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   + +    I   KT AL   A E G I+A     E+  L  +G +LG+ FQL DD+L
Sbjct: 168 NIETNVSDYLKIINAKTAALFSAAAEVGPIIAGYGPEERSALHQYGLSLGLAFQLIDDVL 227

Query: 229 DCEE 232
           D   
Sbjct: 228 DYSS 231


>gi|254448914|ref|ZP_05062369.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015]
 gi|198261451|gb|EDY85741.1| octaprenyl-diphosphate synthase [gamma proteobacterium HTCC5015]
          Length = 322

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          L++ A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPQLAVLAARAAGYQGEDHLQIAAIIEFIHTATLLHDDV--VDASELRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ L + +FE++        D++R   +LS   N+  +G +  Q+L+I 
Sbjct: 101 AVFGNEAAVLVGDFLYSRSFEMMVEL-----DSMRIMSILSRATNVIAEGEVM-QLLNIH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   +   KT  L   A   GA+++   Q +++ L  +G +LG  FQL DD+L
Sbjct: 155 DADTTEARYLEVIHSKTAKLFEAATRIGAVLSGLPQEKEQALADYGMHLGTAFQLIDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|21227869|ref|NP_633791.1| dimethylallyltransferase [Methanosarcina mazei Go1]
 gi|20906283|gb|AAM31463.1| Dimethylallyltransferase [Methanosarcina mazei Go1]
          Length = 324

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 17/236 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L  +++  S  +D  +D+LL            + L  A RY +  GGK++R  ++ 
Sbjct: 2   MLMTLVDEIKNRSSHVDAAIDELL-------PVTRPEELYKASRYLVDAGGKRLRPAVLI 54

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     N  + L    A+E +H ++LIH     MD   IRRG P VH+++ E  AI+A
Sbjct: 55  LAAEAVGSNLRSVLPAAVAVELVHNFTLIH--DDIMDRDDIRRGMPAVHVKWGEAGAILA 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           G+ L + AFEI+S  + +    ++   +LS T       +  GQ LD+  E    + E++
Sbjct: 113 GDTLYSKAFEILSKVENEPVRVLKCMDVLSKT----CTEICEGQWLDMDFETRKKVTESE 168

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              + + KT  L   A + GA++  AS    E L  +G  +GI FQ+ DD+LD   
Sbjct: 169 YLEMVEKKTSVLYAAAAKIGALLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMTA 224


>gi|89256379|ref|YP_513741.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314825|ref|YP_763548.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|254367716|ref|ZP_04983737.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica 257]
 gi|89144210|emb|CAJ79480.1| Octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129724|gb|ABI82911.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253527|gb|EBA52621.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica 257]
          Length = 325

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++   Q+  +   R++ +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|119509566|ref|ZP_01628713.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
 gi|119465755|gb|EAW46645.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
          Length = 323

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  LL +    +    +  L  A  +    GGK+IR  +V   +    +       
Sbjct: 11  VEADL-RLLAENLKQLVGNRHPILFMAAEHLFGAGGKRIRPAIVLLISRATMLEEDITLR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  +    A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESQMRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q ++  D  I           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSEVIMDLATGEI------QQGINCFDNGISIETYLKKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++ A+++ AS    E L  +G +LG+ FQ+ DD+LD   
Sbjct: 182 SSKAAALLSDASPETAENLYDYGRHLGLAFQIVDDILDFTS 222


>gi|222150203|ref|YP_002551160.1| geranyltranstransferase [Agrobacterium vitis S4]
 gi|221737185|gb|ACM38148.1| geranyltranstransferase [Agrobacterium vitis S4]
          Length = 283

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 117/220 (53%), Positives = 155/220 (70%), Gaps = 3/220 (1%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77
           +L +LL       +     +LL+A+R+A+L GGK++R FLV E A LF+     ALRVGA
Sbjct: 1   MLTELLQPEPLSDEIARPGQLLAAMRHAVLNGGKRLRPFLVVESARLFHGQDDAALRVGA 60

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+EC+HCYSL+HDDLP+MD+  +RRG+PTVHI +DE TAI+AG+ LLT+AFEII+SP+T 
Sbjct: 61  ALECLHCYSLVHDDLPAMDDDDLRRGQPTVHIAFDEATAILAGDSLLTFAFEIIASPQTT 120

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACES 195
           L D  ++ L+L+L    GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ FACE+
Sbjct: 121 LPDAAKTALVLALARAAGLGGMAGGQALDLAAEKHAPDEVGIVTLQAMKTGALLRFACEA 180

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           G ++A AS  ++ERLR FGE +G  FQLADDLLD   D  
Sbjct: 181 GPVIAGASNEDRERLRQFGELIGRAFQLADDLLDLTADAA 220


>gi|228476852|ref|ZP_04061497.1| geranyltranstransferase [Streptococcus salivarius SK126]
 gi|228251426|gb|EEK10571.1| geranyltranstransferase [Streptococcus salivarius SK126]
          Length = 290

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 82/225 (36%), Positives = 127/225 (56%), Gaps = 10/225 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTA 72
           +ID  + D   +    + +     L++AI Y++  GGK+IR  +  +    F +    + 
Sbjct: 6   KIDAAIRDYYQKRNIPVSSD----LITAILYSVDSGGKRIRPLIFLDLLEGFGLELTPSH 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             V A++E IH  SLIHDDLP+MD+   RRG+ T H ++DE TAI+AG+ L    F++++
Sbjct: 62  FDVAASLEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLLA 121

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMC 190
              T L   IR QL+  L+H+ G  GM+GGQMLD++ E   +D +Q+  I + KTG L+ 
Sbjct: 122 Q--TDLSAEIRVQLIQVLSHSSGTFGMVGGQMLDMKGEGQELDLSQLAKIHEHKTGKLLT 179

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           F   +  I+A   Q   E L+  G  +G+ FQ+ DD+LD   D  
Sbjct: 180 FPFVAAGIVAQKDQQVLENLQEAGHLIGLAFQVRDDILDVTADFE 224


>gi|157960679|ref|YP_001500713.1| polyprenyl synthetase [Shewanella pealeana ATCC 700345]
 gi|157845679|gb|ABV86178.1| Polyprenyl synthetase [Shewanella pealeana ATCC 700345]
          Length = 323

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +    + L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSILAARAIDYKGDSHLKLAAIIEFIHTASLLHDDV--VDESMLRRGRKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++  ++     +    +L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELRS-----LDVLEILADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEDSYMRVIYCKTAKLFEAATRLAGLLADSPIEVQTALADYGKYLGTAFQLTDDLL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYTADTE 221


>gi|219669380|ref|YP_002459815.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539640|gb|ACL21379.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 322

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +++  + +R++  L   + +T   +  Q   +LL A      GGK++R          
Sbjct: 6   LFNQINSDLQRVEKELHAYI-KTDFPILDQSAVQLLEA------GGKRLRPAFTLLAGKF 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +       L V  A+E IH  +L+HDD+  +D    RRG+PTV  ++  V +I  G+ LL
Sbjct: 59  YGYPIDRLLPVAMALELIHMATLVHDDV--VDASMTRRGRPTVKAKWGNVVSIATGDYLL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A E+++         I +++ + ++           Q+    D   +  Q +   K K
Sbjct: 117 AKALELLAQINHPEVSKILAEVSVEMSQGEI------QQIKASNDVNQNLKQYYYRIKRK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           T  L+  +C+ GA+++ A + E   L  +G  LG+ FQ+ DD+LD      +L K
Sbjct: 171 TAMLISASCKLGALISAAPRREVWALGAYGHALGMAFQIVDDVLDVTAEASELGK 225


>gi|88859033|ref|ZP_01133674.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas tunicata
           D2]
 gi|88819259|gb|EAR29073.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas tunicata
           D2]
          Length = 323

 Score =  184 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          + + A +E IH  +L+HDD+  +D   +RRG  T +
Sbjct: 43  GGKRVRPMLSILSAKALGYEGDAHITLAAIVEFIHTATLLHDDV--VDESDLRRGNATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF+++        + +R   +L+   N+  +G +  Q+++  
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLMVGL-----EEMRVMKILADATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  A++       +E+L+ +G +LG  FQL DD+L
Sbjct: 155 DPDTTEQSYMQVIYSKTAKLFEAATQLAAVITRKDAATEEQLKLYGMHLGTAFQLVDDVL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|145300249|ref|YP_001143090.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853021|gb|ABO91342.1| octaprenyl-diphosphate synthase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 323

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 8/183 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L    A          L++ A IE IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 42  AGGKRMRPMLTVMAARALGYEGQDHLKLAAIIEFIHTSTLLHDDV--VDESDLRRGRETA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +F+++S        N+R   +LS   N   +G +  Q+++ 
Sbjct: 100 NALFGNAASVLVGDYLYSRSFQMMSELS-----NLRVMEILSDATNTIAEGEVL-QLMNC 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D    E     +   KT  L   A    A++ H  +  ++ +  +G+ LG  FQ+ DD+
Sbjct: 154 NDPDTTEQSYMTVIYCKTAKLFEAATRLAAVLTHQPEPVEQAMTDYGKYLGTAFQIIDDV 213

Query: 228 LDC 230
           +D 
Sbjct: 214 MDY 216


>gi|239502342|ref|ZP_04661652.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii AB900]
          Length = 303

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237


>gi|124494424|gb|ABN13312.1| heptaprenyl diphosphate synthase component II [Bacillus subtilis]
          Length = 348

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +            L  A  + L  GGK+IR   V       + +      V   +E
Sbjct: 43  DVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLE 102

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +L  + E+++        
Sbjct: 103 MIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAH 160

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I SQ ++ +   +G    + G+    Q+            K KT  L+  +C+ GAI +
Sbjct: 161 RILSQTIVEVC--LGEIEQIKGKYNMEQN----LRTYLRRIKRKTALLIAVSCQLGAIAS 214

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253


>gi|156502468|ref|YP_001428533.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|290953802|ref|ZP_06558423.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312813|ref|ZP_06803545.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|156253071|gb|ABU61577.1| polyprenyl synthetase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 325

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALVKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVILFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++   Q+  +   R++ +G  LG  FQ+ DD+LD   D   L K
Sbjct: 174 KLFEAACELAGLISIDKQDYTKYQGRIKNYGVYLGNAFQITDDVLDYVSDAESLGK 229


>gi|329297304|ref|ZP_08254640.1| polyprenyl synthetase [Plautia stali symbiont]
          Length = 323

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR  +    A   N      +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKHIRPMIAVLSARALNYQGSLHVTNAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++S  +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRAFQMMTSMGS-----LKILALMSEAVNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A ++ AI+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPDITEESYMRVIYSKTARLFEAASQASAILAEATPAQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSAD 219


>gi|227878890|ref|ZP_03996795.1| geranyltranstransferase [Lactobacillus crispatus JV-V01]
 gi|256849774|ref|ZP_05555205.1| geranylgeranyl diphosphate  synthase [Lactobacillus crispatus
           MV-1A-US]
 gi|262046527|ref|ZP_06019488.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
           MV-3A-US]
 gi|227861524|gb|EEJ69138.1| geranyltranstransferase [Lactobacillus crispatus JV-V01]
 gi|256713263|gb|EEU28253.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
           MV-1A-US]
 gi|260572976|gb|EEX29535.1| geranylgeranyl diphosphate synthase [Lactobacillus crispatus
           MV-3A-US]
          Length = 289

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 78/222 (35%), Positives = 116/222 (52%), Gaps = 17/222 (7%)

Query: 19  ILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRV 75
           I+DD L   A H+ ++  D ++   + Y+++ GGK++R  L     +          +R+
Sbjct: 14  IIDDYL---AKHLASEVKDQKISQIMAYSVMAGGKRLRPLLFLATLNTLGKKIEEPEVRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190
                   +QL+  +T  +G  GM+GGQ LDI          D   +  ++ +KTG L+ 
Sbjct: 131 NS------AQLVELITKAVGPNGMVGGQYLDIDSTNNASVSGDAKFINKMEWLKTGCLIQ 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + E  AI A AS  EK +L  F +  G  +Q+ DDL+D  E
Sbjct: 185 ASVEMAAIFAKASDIEKVKLIDFAKVFGRSYQIYDDLVDVVE 226


>gi|157165525|ref|YP_001467681.1| geranyltranstransferase (farnesyl-diphosphate synthase; FPP
           synthase) [Campylobacter concisus 13826]
 gi|112800771|gb|EAT98115.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Campylobacter concisus 13826]
          Length = 299

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 22/208 (10%)

Query: 48  LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+       + +    A+RV   +E +H YSLIHDDLPSMDN  +RRG PT
Sbjct: 35  AGGKHFRALLLLGVVENVDKSLTQKAMRVALGLEMMHTYSLIHDDLPSMDNASLRRGTPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H+ YDE TAI+AG+ L T+AF  IS     L  + R + +  L+ N G+ GM+ GQ LD
Sbjct: 95  LHVTYDETTAILAGDALNTHAFYEISRA--DLPADTRIKCVEILSQNAGVSGMVLGQALD 152

Query: 167 IQDEF-------------------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
              E                    +   ++  +   KT  L+  + + GA++ +  + E 
Sbjct: 153 CFFENTNKEDIKRAKAKFGLSGKMLSLDELVFLHIHKTAKLIAASLKMGAVIVNLDEKEC 212

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +++   G  LG+ FQ+ DD++D   D  
Sbjct: 213 DKIYDIGLKLGLAFQIQDDIIDLTSDEA 240


>gi|91776572|ref|YP_546328.1| trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT]
 gi|91710559|gb|ABE50487.1| Trans-hexaprenyltranstransferase [Methylobacillus flagellatus KT]
          Length = 322

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 15/229 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + S + E+ +++D ++   L  +   +  Q  D ++++      GGK++R  LV   A  
Sbjct: 6   IQSCIAEDMQKVDAVIRKAL-HSDVVLINQVADYIINS------GGKRLRPTLVLLSAGA 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F         + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + 
Sbjct: 59  FGRIEAKHHELAAIIELIHTSTLLHDDV--VDESSLRRGKATANTLFGNAASVLVGDFIY 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           +  F+++   ++     +R   +LS   N   +G +  Q+L++ D  I +     +   K
Sbjct: 117 SRTFQMMVGIQS-----MRVMEVLSDATNTIAEGEVL-QLLNVHDADITDEAYLRVIHYK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   A   GAI+      ++  +  +G  LG  FQL DD+LD   D
Sbjct: 171 TAKLFEAATRLGAIICGTDAQDEAAMAEYGMRLGTAFQLVDDVLDLSGD 219


>gi|157692773|ref|YP_001487235.1| heptaprenyl diphosphate synthase component II [Bacillus pumilus
           SAFR-032]
 gi|157681531|gb|ABV62675.1| possible heptaprenyl diphosphate synthase component II [Bacillus
           pumilus SAFR-032]
          Length = 320

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 13/233 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL+     ++  +D +  +    +++ +   L  A  + L  GGK+IR   V       +
Sbjct: 2   KLKAMISFLNHDIDIIEKELEQTVRSDYA-LLSEAGLHLLQAGGKRIRPVFVLLSGMFGD 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +      V  A+E IH  SL+HDD+  +D+  +RRGKPT+  ++D   A+  G+ +   
Sbjct: 61  YDINKIKYVAVALELIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMFAR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           + E ++     +   I S++++ L            Q+ D  +   +        K KT 
Sbjct: 119 SLEYMTKINHPMAHEILSKMVVELCLGEI------EQVKDKYNMDQNLRTYLRRIKRKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            L+  +C+ GAI A   +   + L  FG  +G+ +Q+ DD+LD    EE+L K
Sbjct: 173 LLIAGSCQLGAIAAGTDEKTHKALYWFGYYVGMSYQIIDDVLDFTSTEEELGK 225


>gi|119944297|ref|YP_941977.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37]
 gi|119862901|gb|ABM02378.1| octaprenyl-diphosphate synthase [Psychromonas ingrahamii 37]
          Length = 331

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A    ++     ++ A IE IH  +L+HDD+  +D+  +RRGK T +
Sbjct: 51  GGKRIRPLITVLAAKALGIHDQNTTKLAAIIEFIHTATLLHDDV--VDDSDLRRGKKTAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++  +     N++   +LS   NI  +G +  Q+++  
Sbjct: 109 AVFGSAASVLVGDFLYTRSFQMMTQLR-----NLKVMDILSSATNIIAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   I   KT  L   A +  A++   S+  +  L  +G+ LG  FQL DD++
Sbjct: 163 DPDTTEKKYMDIIYFKTAKLFEAATQLVAVLGEQSEEIETALLNYGKYLGTAFQLTDDVM 222

Query: 229 DCEED 233
           D   D
Sbjct: 223 DYNSD 227


>gi|154151748|ref|YP_001405366.1| farnesyltranstransferase [Candidatus Methanoregula boonei 6A8]
 gi|154000300|gb|ABS56723.1| Farnesyltranstransferase [Methanoregula boonei 6A8]
          Length = 325

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 17/232 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + L+  +++ID +++         +       L +       GGK++R  +V   A
Sbjct: 6   SDLSAYLKSVAQQIDGMIEKNFTHAGGELDRASAHLLSA-------GGKRLRPAVVMLSA 58

Query: 63  SLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +    +    A+E  H ++LIHDD+  MD   +RRG PTVH ++D  T I+AG+
Sbjct: 59  DAIRHGSSKDVMPAALALEVTHTFTLIHDDI--MDGDSLRRGVPTVHTKWDMPTGILAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            L   AFE I   K      +++  +L+         +  GQ  D+  E    + E +  
Sbjct: 117 VLYARAFEFICQSKADEGPKVQAVALLARACA----DICEGQHQDMSFEHRADVTEEEYM 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +   KTG L   A   G  +A  +  +   L  FG N GI FQ+ DDL+D 
Sbjct: 173 AMVAKKTGVLYAAAAAIGGTLAGGNPEQIRALYQFGLNTGIAFQIQDDLIDL 224


>gi|187929506|ref|YP_001899993.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
 gi|309781717|ref|ZP_07676450.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA]
 gi|187726396|gb|ACD27561.1| Polyprenyl synthetase [Ralstonia pickettii 12J]
 gi|308919358|gb|EFP65022.1| geranyltranstransferase [Ralstonia sp. 5_7_47FAA]
          Length = 303

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 123/236 (52%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +     R +  L+  L       +T    RL +A+RYA LG GK++R  L    
Sbjct: 2   SDFAQWMASVVARTEVALERALP-----AETVSPQRLHAAMRYATLGAGKRVRPLLAHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L + +      V  A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GALGDASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
            L T AF +++     ++   R+ LM  L    G QGM GGQ +D+Q   I   + ++  
Sbjct: 117 ALQTQAFIVLAEQGA-VRPATRAVLMGELARASGSQGMAGGQAIDLQSVGIALSQDELEA 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+ A  +    E +  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASLRMGALCAEVNAAALEHVDAYAGAVGLAFQVVDDILDVTADTA 231


>gi|21674031|ref|NP_662096.1| polyprenyl synthetase [Chlorobium tepidum TLS]
 gi|21647180|gb|AAM72438.1| polyprenyl synthetase [Chlorobium tepidum TLS]
          Length = 324

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 21/237 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           +   +  +L++  +R  T+L               N  +    RY L   GK+IR  LV 
Sbjct: 6   VTFSVTEELKQFQERYKTVLHS------------SNSLVDKVTRYVLRQQGKQIRPTLVI 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +    H    R    +E +H  +LIHDD+  +D   +RRG P+++  +    +++ 
Sbjct: 54  LAAKVCGGVHDVTYRGAIMVELLHSATLIHDDV--VDGAEMRRGIPSINALWKNKISVLI 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL+         K     ++ S+ +  ++    L      Q+   +   I E     
Sbjct: 112 GDYLLSKGLLYSLENKDYRSLHLVSEAVRRMSEGEIL------QIQKTRSLDITEEDYLS 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +   KTG+L+  +C  GA  +  S++E   L+ +GE LG+ FQ+ DDLLD   D  K
Sbjct: 166 VIADKTGSLIATSCAIGAASSTDSEDEIASLKSYGEFLGLAFQIRDDLLDYTGDSKK 222


>gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1]
 gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter sp. ADP1]
          Length = 302

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 88/239 (36%), Positives = 129/239 (53%), Gaps = 18/239 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           LQ   +RI   L   L            + L SA+ + + LGGK++R  L    AS+  N
Sbjct: 12  LQAAQERIQQDLTTALDAFDL------PEPLKSAVYHTVMLGGKRVRPALCYAVASMEKN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N+  A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNYAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           AFE++ S     ++++ + ++L            M+ GQ+LD+Q E   ID+ Q+  I +
Sbjct: 126 AFEVLGSRLFDQQNSVDASIVLRQMQILATASSKMVCGQVLDLQAEGKEIDQEQLENIHR 185

Query: 183 MKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            KTGAL+  A   GA  + +   Q     LR FG+ +G+ FQ+ DD+LD     E L K
Sbjct: 186 NKTGALIQAALMMGAVTLFSGMDQA-IPHLRQFGQRIGLAFQVQDDILDIISSTETLGK 243


>gi|169632576|ref|YP_001706312.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii SDF]
 gi|169151368|emb|CAP00088.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
           synthase) [Acinetobacter baumannii]
          Length = 303

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-N 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITS 237


>gi|163761016|ref|ZP_02168094.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica
           DFL-43]
 gi|162281797|gb|EDQ32090.1| octaprenyl-diphosphate synthase protein [Hoeflea phototrophica
           DFL-43]
          Length = 338

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A++F  +    +++  ++E +H  +L+HDD+  +D   +RRG+ T  
Sbjct: 57  GGKRLRPMLTLASATMFGYSGDFHIKLATSVEFMHTATLLHDDV--VDESDLRRGRSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +     + +  +LS    +  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFKMMVEVGS-----LEALDVLSTAAAVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   ACE G I+A  S+ E+  LR +G NLG+ FQL DD+L
Sbjct: 169 NMETTEDDYLSVIRAKTAALFSAACEVGPIIAETSKAERSALRSYGINLGLAFQLIDDVL 228

Query: 229 DCEE---DLPK 236
           D      DL K
Sbjct: 229 DYGGSANDLGK 239


>gi|254262303|emb|CAZ90627.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter pulveris]
          Length = 312

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 12/227 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           +LQ   K I+  LD LL Q      T+ ND +  A+R A L  GK+IR  L+   A    
Sbjct: 14  ELQSMRKTIENRLDSLLPQ------TEENDLVTQAMRDATLAPGKRIRPLLMLLAARDLG 67

Query: 67  --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               H   L +  A+E IH  SL  DD+P MDN  +RRG+PT+H ++ E  AI+A   LL
Sbjct: 68  CAPAHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGRPTIHRKFGENVAILAAVALL 127

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           + AF ++SS +  L D  R+Q +  L+  +G QG++ GQ  D+++  E      +     
Sbjct: 128 SKAFGVVSSAE-GLSDAGRAQAVSELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTND 186

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KTG L   + +  AI A+AS   + RLR F  + G  FQL DDL+D
Sbjct: 187 LKTGVLFSASLQLAAIAANASVAARNRLRSFALDFGQAFQLLDDLID 233


>gi|213971072|ref|ZP_03399192.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           T1]
 gi|301384205|ref|ZP_07232623.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060871|ref|ZP_07252412.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           K40]
 gi|302132864|ref|ZP_07258854.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213924180|gb|EEB57755.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           T1]
 gi|331018359|gb|EGH98415.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 322

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +  AS+ + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|302188811|ref|ZP_07265484.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. syringae
           642]
          Length = 322

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MDVMKILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A + +AS+ + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNASEAQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|297584422|ref|YP_003700202.1| heptaprenyl diphosphate synthase component II [Bacillus
           selenitireducens MLS10]
 gi|297142879|gb|ADH99636.1| heptaprenyl diphosphate synthase component II [Bacillus
           selenitireducens MLS10]
          Length = 323

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 11/232 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL E    +   +  +  +    ++ +H   + ++      GGK+IR   V   A   + 
Sbjct: 2   KLSEIYLYLKQDISKIEKELEMSIEARHPVLVKASSHLLKAGGKRIRPVFVLLSAQFGDY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  V   +E IH  SL+HDD+  +D+  +RRGK T+  ++D   A+  G+ +   A
Sbjct: 62  KLDKVKHVAVPLEMIHMGSLVHDDV--IDDAELRRGKKTIKAEWDNRVAMYTGDYMFAKA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            EI S        N++   +LS        G +  Q+ +  +            K KT  
Sbjct: 120 IEIASKSG-----NMKLHEILSDAMVEMSIGEVE-QIKEQFNPDQHLRIYLRRIKRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +CE GA++A A +  + +L+ +G   G+ FQ+ DD+LD      +L K
Sbjct: 174 LISVSCELGALIAGADETTQMKLKRYGYFTGMAFQITDDILDFVGTEKELGK 225


>gi|120602763|ref|YP_967163.1| polyprenyl synthetase [Desulfovibrio vulgaris DP4]
 gi|120562992|gb|ABM28736.1| farnesyl-diphosphate synthase [Desulfovibrio vulgaris DP4]
 gi|311233551|gb|ADP86405.1| Farnesyltranstransferase [Desulfovibrio vulgaris RCH1]
          Length = 299

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 85/239 (35%), Positives = 135/239 (56%), Gaps = 10/239 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
              L ++L+  + R++  L   L             RL SA+ Y+LL GGK++R  L   
Sbjct: 4   TADLKARLRMQAARVEGYLATCLA------GRGIPPRLQSAMEYSLLAGGKRLRPVLCLS 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A +  ++ ++ +   AAIE IH YSLIHDDLP+MD+  +RRG+P+ H Q+DE TAI+AG
Sbjct: 58  TAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMDDDDLRRGRPSNHRQFDEATAILAG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +GLLT AF++++S    +        +  ++   G  GM+GGQ LD+     + ID   +
Sbjct: 118 DGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGSSGMVGGQALDMDYTGRDDIDLAAL 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             +  MKTGAL+  +C +GA++  A  +  E++  +G  +G  FQ+ DD+LD   D  +
Sbjct: 178 RTMHAMKTGALIRCSCVAGALLGGAPASAVEQVAGYGAAIGAAFQIVDDILDETGDEAQ 236


>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
          Length = 303

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 16/233 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           L++  +RI     DLL   A+       + L +A+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTALAAF---SIPEPLKAAVHHAVMLGGKRVRPALCYATASLKPN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N     R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  HNFAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSM 125

Query: 127 AFEIISS-PKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFEI++S    +      + ++L            M+ GQ+LD+Q E   +D+T++  I 
Sbjct: 126 AFEILASRLFDEQGQGTDAAIVLKQVQILATASSKMVAGQVLDLQAEGKQVDQTELENIH 185

Query: 182 KMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA  + A        +LR FG+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTVFAGTDPA-IPKLRQFGQTIGLAFQVQDDILDITA 237


>gi|157150564|ref|YP_001449997.1| geranyltranstransferase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075358|gb|ABV10041.1| geranyltranstransferase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 291

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 80/234 (34%), Positives = 127/234 (54%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E  ++ID  + D   Q A       +D L+ +I Y++  GGK+IR  L+ E    F++ 
Sbjct: 4   EEKIRQIDQTIIDYYSQQA------VSDSLVESILYSVQAGGKRIRPLLLLELVEAFDLP 57

Query: 69  -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  LQPAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
             +I+    +L    +  L++ L+   G  GM+GGQ LD++ E   +D  ++  I   KT
Sbjct: 118 CGLIAVA--ELPSQAKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELKAIHAHKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ F   +  ++A   +  + +LR  GE +G+ FQ+ DD+LD     E+L K
Sbjct: 176 GKLLAFPFVAAGLLAQVDEGVQAKLRRIGELIGLAFQVRDDILDVTASFEELGK 229


>gi|330508369|ref|YP_004384797.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanosaeta concilii GP-6]
 gi|328929177|gb|AEB68979.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanosaeta concilii GP-6]
          Length = 319

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 17/230 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +  +L+  +  +   ++ LL          H   L  A R+ +  GGK++R  ++   A 
Sbjct: 1   MEEELERRAALVTATIEKLL-------PVMHPRGLYEASRHLVDSGGKRLRPSMLLLAAE 53

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                 L       +IE +H ++LIHDD+  MDN  +RRG+P VH  + +  AI+AG+ L
Sbjct: 54  AAGGEALALAPAAVSIELVHNFTLIHDDI--MDNADVRRGRPAVHKIWGQSGAILAGDTL 111

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMI 180
            + AF+++       +  + +  MLS T       +  GQ LD++ E    + E +   +
Sbjct: 112 YSKAFQVLGMTAASPERILGAMNMLSRTCTA----ICEGQWLDMEFESKDRVTENEYMEM 167

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            + KTG L   +   G ++A AS      L  FG   G+ FQL DD++D 
Sbjct: 168 IEKKTGVLYGASAGMGGLLAGASPEVVRALDEFGRLTGMGFQLQDDVIDL 217


>gi|237801840|ref|ZP_04590301.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024698|gb|EGI04754.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 319

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +  AS+ + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|239995268|ref|ZP_04715792.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii ATCC
           27126]
          Length = 324

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    +++     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLSARAMGIDNNDHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ S K      +R   +LS   N   +G +  Q+++  
Sbjct: 101 AIFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMEILSEATNQIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E + F +   KT  L   A +  A++   +++ +  ++ +G++LG  FQLADD+L
Sbjct: 155 DPSTTEARYFDVIYGKTARLFEAATQLAAVLTDQNEHIEHAMQEYGKHLGTAFQLADDIL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYMADSE 221


>gi|28868024|ref|NP_790643.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28851260|gb|AAO54338.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|330878952|gb|EGH13101.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330966393|gb|EGH66653.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 322

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDIRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +  AS+ + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCKASEAQTEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|311087355|gb|ADP67435.1| geranyltranstransferase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 282

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R    ++  L  T + +  Q +  LL A++Y++  G K++RS L+     +F VN  T 
Sbjct: 8   ERYKHRINQKLFYTLNQLPFQKSS-LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +  AIE IH YSLIHDDLP MDN   RRGK + H++Y E T+++AG+ L + AF I+S
Sbjct: 67  DVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILS 126

Query: 133 SPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +       N+ R +++  L+++IG  GM  GQ LD++ E   ++ +++ +I   KT  LM
Sbjct: 127 NSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM 186

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A       + + S++    L  F  ++G+ FQ+ DD+LD ++D  K
Sbjct: 187 RSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234


>gi|311086191|gb|ADP66273.1| geranyltranstransferase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311087854|gb|ADP67933.1| geranyltranstransferase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 301

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R    ++  L  T + +  Q +  LL A++Y++  G K++RS L+     +F VN  T 
Sbjct: 8   ERYKHRINQKLFYTLNQLPFQKSS-LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +  AIE IH YSLIHDDLP MDN   RRGK + H++Y E T+++AG+ L + AF I+S
Sbjct: 67  DVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILS 126

Query: 133 SPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +       N+ R +++  L+++IG  GM  GQ LD++ E   ++ +++ +I   KT  LM
Sbjct: 127 NSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM 186

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A       + + S++    L  F  ++G+ FQ+ DD+LD ++D  K
Sbjct: 187 RSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234


>gi|219682370|ref|YP_002468754.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622103|gb|ACL30259.1| geranyltranstransferase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086767|gb|ADP66848.1| geranyltranstransferase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 282

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R    ++  L  T + +  Q +  LL A++Y++  G K++RS L+     +F VN  T 
Sbjct: 8   ERYKHRINQKLFYTLNQLPFQKSS-LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +  AIE IH YSLIHDDLP MDN   RRGK + H++Y E T+++AG+ L + AF I+S
Sbjct: 67  DVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILS 126

Query: 133 SPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +       N+ R +++  L+++IG  GM  GQ LD++ E   ++ +++ +I   KT  LM
Sbjct: 127 NSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM 186

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A       + + S++    L  F  ++G+ FQ+ DD+LD ++D  K
Sbjct: 187 RSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234


>gi|15617063|ref|NP_240276.1| geranyltranstransferase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681815|ref|YP_002468201.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471517|ref|ZP_05635516.1| geranyltranstransferase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11386920|sp|P57537|ISPA_BUCAI RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Geranyltranstransferase
 gi|25403631|pir||B84984 geranyltranstransferase (EC 2.5.1.10) [imported] - Buchnera sp.
           (strain APS)
 gi|10039128|dbj|BAB13162.1| geranyltranstransferase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624658|gb|ACL30813.1| geranyltranstransferase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 282

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 79/228 (34%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
           +R    ++  L  T + +  Q +  LL A++Y++  G K++RS L+     +F VN  T 
Sbjct: 8   ERYKHRINQKLFYTLNQLPFQKSS-LLKAMKYSVFSGSKRLRSSLIYSTGDVFKVNITTL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +  AIE IH YSLIHDDLP MDN   RRGK + H++Y E T+++AG+ L + AF I+S
Sbjct: 67  DVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAFNILS 126

Query: 133 SPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALM 189
           +       N+ R +++  L+++IG  GM  GQ LD++ E   ++ +++ +I   KT  LM
Sbjct: 127 NSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLM 186

Query: 190 CFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A       + + S++    L  F  ++G+ FQ+ DD+LD ++D  K
Sbjct: 187 RSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVK 234


>gi|299538563|ref|ZP_07051846.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
           fusiformis ZC1]
 gi|298726150|gb|EFI66742.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
           fusiformis ZC1]
          Length = 324

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S L+ + + I+  L+  +  ++S++    +  LL A      GGK+IR   V   A  
Sbjct: 9   LYSDLKSDIEIIEQELEKAV-DSSSYLINDASLHLLQA------GGKRIRPIFVLLGAKF 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            + +      V   +E IH  SL+HDD+  +D+  +RRG+PTV  Q++   A+  G+ + 
Sbjct: 62  GDYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKSQWNNRVAMYTGDFIF 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A E I+  +  L   I ++ M+ + +   +      Q+ D           F   K K
Sbjct: 120 ARALEYITKLEDPLVHQILARTMVEICNGEVI------QIEDKFRLDQGLKDYFRRIKRK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           T  L+  +CE GA+ A         L+ FG  +G+ FQ+ DD+LD      +L K
Sbjct: 174 TALLISSSCELGAVAAGVDTKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 228


>gi|149927152|ref|ZP_01915409.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Limnobacter sp. MED105]
 gi|149824091|gb|EDM83312.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Limnobacter sp. MED105]
          Length = 330

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 21/236 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S +  + +++D ++   L    S +  Q +D +++A      GGK++R  LV   A    
Sbjct: 13  SPIAADMQQLDQVIRTSLHSEVS-LINQISDYIINA------GGKRLRPALVILTARALG 65

Query: 67  VNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    + + A +E IH  +L+HDD+  +D   +RRG+ T + +Y    A++ G+ L
Sbjct: 66  ATQQQMQQTIELAAIVEFIHTATLLHDDV--VDESDMRRGRLTANAEYGNSAAVLVGDFL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + +F+++          +    +LS   N   +G +  Q+L+ +D  + E +   +   
Sbjct: 124 YSRSFQMMVKIGL-----MDVMDVLSEATNTIAEGEVL-QLLNCKDPDVTEARYMQVIDF 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           KT  L   +C    I+   S+     L  FG  +G  FQL DD+LD   +   L K
Sbjct: 178 KTAKLFEASCRLAGIVTGQSKEAITNLGRFGAEVGSAFQLIDDVLDYAGESAALGK 233


>gi|118595179|ref|ZP_01552526.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Methylophilales bacterium HTCC2181]
 gi|118440957|gb|EAV47584.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Methylophilales bacterium HTCC2181]
          Length = 296

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 135/236 (57%), Gaps = 14/236 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            +  + K+I+  L     +    +       L +   YA+L GGK++RS L+   ++  +
Sbjct: 9   WISHHQKKINLELSHFFKEIDQSL-------LKNVCEYAVLNGGKRLRSLLIYAISNYSD 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   +  A+E IH YSL+HDDLPSMD+  +RRGKP+ HI+YDE  AI+ G+ L + 
Sbjct: 62  GYDTHFNCLALAVEMIHAYSLVHDDLPSMDDDELRRGKPSCHIKYDEAQAILGGDALQSL 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMK 184
           AFE++SS K  ++D ++ +++  L+ +IGL GM  GQ   +D  ++ ++   +  +Q +K
Sbjct: 122 AFELLSSDKFNVQDKVKIKVLNMLSQSIGLHGMALGQSIDIDSANKELNLKSLDHLQALK 181

Query: 185 TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           TGAL+  +C    +++   +Q  ++ +   G+ +G I+Q+ DD+LD E D   L K
Sbjct: 182 TGALIEASCVMSYVISDKYNQKHEKDIASIGKLIGSIYQITDDILDFESDTNTLGK 237


>gi|212638936|ref|YP_002315456.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
           WK1]
 gi|212560416|gb|ACJ33471.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
           WK1]
          Length = 320

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + S L  +  +I+  L  L +Q +  +  + +  LL A      GGK+IR   V     
Sbjct: 5   AMYSFLNGDLNKIEEQLK-LTVQASDPLVNEASLHLLEA------GGKRIRPVFVLLGGQ 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +     RV  A+E IH  SL+HDD+  +D   +RRGK T+  ++ +  A+  G+ L
Sbjct: 58  FGTYHFEKMKRVAVALELIHMASLVHDDV--IDGAMLRRGKETIQAKWGDRFAMYVGDYL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A E +      +   I +  ++ +            Q+ D      +  +     K 
Sbjct: 116 FARALEQMCEIDDPVAHRILANTIVEVCRGEI------EQISDKYRFDQNLRRYLQRIKR 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L+  +C+ GA++A A +   ++L  FG  +G+ FQ+ DD+LD   
Sbjct: 170 KTALLIAASCQLGAVVAGAPETIHKKLYWFGYYVGMSFQITDDILDFIG 218


>gi|291531063|emb|CBK96648.1| farnesyl-diphosphate synthase [Eubacterium siraeum 70/3]
          Length = 302

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 112/238 (47%), Gaps = 10/238 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
           G   +  +E     +  L  +      +        L  A  Y+L  GGK+IR  L  E 
Sbjct: 13  GEFDAVFREYRAIFEKQLRTVCDSFCDNGAKYKA--LYDAASYSLEAGGKRIRPVLAFEM 70

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +   +   A+    A+E IH +SLIHDDLP MD+  +RRG+P+ H  + E  A++AG+
Sbjct: 71  CRVCGGDINDAVPAAVAVEMIHTFSLIHDDLPCMDDDDMRRGRPSCHKAHGEAVALLAGD 130

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L  YA + I    + L    ++ ++  L       GM+ GQ +D   +F     +  + 
Sbjct: 131 ALSAYAGKYICD--SNLSAEKKTAMIKELYDR--TLGMIEGQTIDTDGKFDTLDGLLSMY 186

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           +MKT  L+  A   G I A A + +    R +  ++G+ FQ+ DD+LD     E+L K
Sbjct: 187 EMKTSELLTAASVMGCIAAGADEEKISAARAYAHDVGLAFQIVDDILDVTSTVEELGK 244


>gi|291277196|ref|YP_003516968.1| geranyltranstransferase [Helicobacter mustelae 12198]
 gi|290964390|emb|CBG40240.1| geranyltranstransferase [Helicobacter mustelae 12198]
          Length = 287

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 73/214 (34%), Positives = 118/214 (55%), Gaps = 7/214 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE--CASLFNVNHLTALRVGA 77
            ++ L      M+  H     +       GGK+ R  L+    C+  F++     L    
Sbjct: 10  FEEFLQSYPIEMEGFHPVFAKAFWEMLKNGGKRFRPALLFAVVCSQNFSLAKNAFLP-AL 68

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+EC+H YSLIHDDLP MD+  +RRG PT+H  YDEVTA + G+GL T++F +++  K  
Sbjct: 69  ALECLHTYSLIHDDLPCMDDASLRRGYPTLHRSYDEVTATLVGDGLNTFSFYLLT--KAH 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACES 195
           L  + R +L+  L+H  G+ GM+ GQ +D   +++ ++  +++ I   KT  L+  +   
Sbjct: 127 LDPSTRLRLIEMLSHYGGIGGMVIGQAMDCYFENQHLEIEKLYAIHLNKTAKLIATSLCM 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           G ++A+    E   L  FG +LGI FQ+ DD++D
Sbjct: 187 GGVIANLPDGELRNLWDFGMDLGIFFQVRDDIID 220


>gi|312880186|ref|ZP_07739986.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260]
 gi|310783477|gb|EFQ23875.1| farnesyl-diphosphate synthase [Aminomonas paucivorans DSM 12260]
          Length = 303

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 8/244 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           MN     +L+   +     ++D L         +   RL  A+ Y+L  GGK+IR  L  
Sbjct: 1   MNPERQQRLKNFLEERRLWIEDALSSQCEVPWEEVPPRLQEAMVYSLQAGGKRIRPVLCL 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A    +    A+ +  A E IH  SLIHDDLP MD+  +RRGKPT H  + E  A++A
Sbjct: 61  AAAEQCGLAPRRAMPLALAHEWIHTASLIHDDLPCMDDDDLRRGKPTNHRVFGEALALLA 120

Query: 120 GNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDET 175
           G+ LL +AFE       + +L      + + +    +G +G+ GGQ    D Q +  D  
Sbjct: 121 GDALLAWAFEFALEGLCREELPAPQILKALQTFARAVGPRGICGGQVRDTDPQSQSEDPE 180

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-- 233
            V++I + KT  L+  A   GA++A A  +       +G +LG  FQ+ DD+LD   D  
Sbjct: 181 DVWLIARTKTSVLLESALVGGALLAGAEPSVVSAYGHYGTHLGTAFQIVDDVLDVLGDSA 240

Query: 234 -LPK 236
            L K
Sbjct: 241 TLGK 244


>gi|262282720|ref|ZP_06060488.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA]
 gi|262262011|gb|EEY80709.1| geranyltranstransferase [Streptococcus sp. 2_1_36FAA]
          Length = 291

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 129/234 (55%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +E  ++ID  + D   + A       +D L+ +I Y++  GGK+IR  L+ E    F + 
Sbjct: 4   EEKIRQIDQTIIDYYSKKA------VSDSLVESILYSVQAGGKRIRPLLLLELVEAFGLP 57

Query: 69  HLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             +A  +V +A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  LQSAHFQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDSLFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+    +L   ++  L++ L+   G  GM+GGQ LD++ E   +D  ++  I   KT
Sbjct: 118 YGLIAVA--ELPSQVKVNLIMELSQAAGTFGMVGGQALDMEGEGCQLDLKELQAIHAHKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ F   +  ++    +  + +LR  GE +G+ FQ+ DD+LD     E+L K
Sbjct: 176 GKLLAFPFVAAGLLVQVEEGVQAKLRKIGELIGLAFQVRDDILDVTASFEELGK 229


>gi|310815063|ref|YP_003963027.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
 gi|308753798|gb|ADO41727.1| decaprenyl diphosphate synthase [Ketogulonicigenium vulgare Y25]
          Length = 325

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 14/218 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           +++  L   +   A+    Q +  L+ A      GGK++R  L    A L   +    + 
Sbjct: 17  KVNETLHSYMQSDAAPRIRQVSAHLIDA------GGKRLRPMLTVAAARLCGYDGPHHIH 70

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E IH  +L+HDD+  +D+   RRG+PT ++ +D +++++ G+ L + AF++++  
Sbjct: 71  LAATVEFIHTATLLHDDV--VDDSKQRRGRPTANLLWDNMSSVLVGDYLFSRAFQLMTIT 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            +     +     L+       +G +  Q+   +D          I + KT AL   A  
Sbjct: 129 GS-----MPILAALADASATIAEGEVL-QLSTARDLSATPETYIRIARGKTAALFSAATR 182

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            GA++A       + +  +G+ LGI FQ+ADDLLD   
Sbjct: 183 VGAMLAEPGDAIVQAMHDYGDALGIAFQIADDLLDYTG 220


>gi|254449834|ref|ZP_05063271.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus
           238]
 gi|198264240|gb|EDY88510.1| geranylgeranyl pyrophosphate synthase [Octadecabacter antarcticus
           238]
          Length = 332

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 14/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + L +    ++ ++ D +    +    +    L+ A      GGK++R  L    A
Sbjct: 12  DRLAAALTDEMDAVNVLIRDRMASEHAPRIPEVTAHLVEA------GGKRLRPMLTLAAA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +        + + A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ 
Sbjct: 66  KMCGYGGPYHVHLAATVEFIHTATLLHDDV--VDESAQRRGRPTANLLWDNTSSVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +F+++    +     +R   +L+       +G +  Q+    D    E     I +
Sbjct: 124 LFARSFQLMVETGS-----LRVLDILANASATIAEGEVL-QLTAASDLATSEAVYLQIVR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT AL   A E G ++A   +   + L  +G+ LGI FQ+ DDLLD   
Sbjct: 178 GKTAALFSAALEVGGVIAQQDEALVKALYDYGDALGIGFQIVDDLLDYSG 227


>gi|239831276|ref|ZP_04679605.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239823543|gb|EEQ95111.1| polyprenyl synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 356

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 75  GGKRLRPMMTLAAARMFGYEGDGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTAR 132

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +     + +  +L+ + ++  +G +  Q+   +
Sbjct: 133 MIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASVIAEGEVM-QLAAAK 186

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A   ++  LR +G NLG+ FQL DD L
Sbjct: 187 NMETTEDEYLAVIKAKTAALFSAAGEVGPIIAGARPADRVALRDYGLNLGLAFQLVDDAL 246

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 247 DYGGSAADLGK 257


>gi|254372879|ref|ZP_04988368.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570606|gb|EDN36260.1| octaprenyl-diphosphate synthase [Francisella novicida GA99-3549]
          Length = 325

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 18/236 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 2   QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 62  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 120 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 173

Query: 187 ALMCFACESGAIMA---HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L   ACE   +++         + R++ +G  LG  FQ+ADD+LD   D   L K
Sbjct: 174 KLFEAACELAGVISLDKQGYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAESLGK 229


>gi|89894978|ref|YP_518465.1| hypothetical protein DSY2232 [Desulfitobacterium hafniense Y51]
 gi|89334426|dbj|BAE84021.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 322

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +++  + +R++  L   + +T   +  Q   +LL A      GGK++R          
Sbjct: 6   LFNQINSDLQRVEKELHAYI-KTDFPILDQSAVQLLEA------GGKRLRPAFTLLAGKF 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +       L V  A+E IH  +L+HDD+  +D    RRG+PTV  ++  V +I  G+ LL
Sbjct: 59  YGYPIDRLLPVAMALELIHMATLVHDDV--VDASMTRRGRPTVKAKWGNVVSIATGDYLL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A E+++         I +++ + ++           Q+    D   +  Q +   K K
Sbjct: 117 AKALELLAQINHPEVSKILAEVSVEMSQGEI------QQIKASNDVNQNLKQYYYRIKRK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           T  L+  +C+ GA+++ A + E   L  +G  LG+ FQ+ DD+LD      +L K
Sbjct: 171 TAMLISASCKLGALVSAAPRREVWALGAYGHALGMAFQIVDDVLDVTAEASELGK 225


>gi|167043297|gb|ABZ08002.1| putative polyprenyl synthetase [uncultured marine crenarchaeote
           HF4000_ANIW141M18]
          Length = 283

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 15/225 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L  K     K+I+ +LD       S ++          ++YAL GGK+IR  ++   +  
Sbjct: 11  LLEKYSAYIKKINNVLD-------SELELYTESEFKEPLKYALDGGKRIRPIILLLSSEC 63

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   L    AIE +H  S+IHDD+  +DN  +RR K   HI+Y    +++ G+ +L
Sbjct: 64  VGEIDDNTLAAACAIEFLHTESVIHDDI--IDNETLRRQKDPFHIKYGYNISVLTGDFVL 121

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
                I S       +N R    L+ T  +  +G +    L+   E +       + + K
Sbjct: 122 GLILNIASRI-----NNPRVTKNLATTAMMMSEGEVIESRLE-ASEDVTFDDYLKVIEYK 175

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T      A   GAI++  ++ E E L  +G+N+GI +Q+ DDLLD
Sbjct: 176 TATAFETASRLGAIISEGTEEEIESLADYGKNIGIAYQIRDDLLD 220


>gi|223043139|ref|ZP_03613186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Staphylococcus capitis SK14]
 gi|222443350|gb|EEE49448.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Staphylococcus capitis SK14]
          Length = 288

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 18  TILDDLLLQTASHMQTQH-NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
            +++++       +   H N  L  ++ Y+L  GGK+IR  L+    ++ N ++    + 
Sbjct: 3   NLIEEVNTNLKQAIPESHLNTDLEESMMYSLQAGGKRIRPVLLLLTLNMLNEDYHKGFQS 62

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E IH YSLIHDDLP+MD+   RRGK T H  Y E  AI+AG+ LLT AFE++S+  
Sbjct: 63  ALALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEWKAILAGDALLTKAFELVSNDD 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193
             ++DN++ +++  L+   G  GM+GGQ LD+Q E   +D   +  I K KTGAL+ FA 
Sbjct: 123 L-IEDNVKVKVLQRLSKASGHIGMVGGQTLDMQSENQTVDLKTLESIHKAKTGALLTFAV 181

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   +A   Q     L  F ++LG++FQ+ DDLLD   D  K
Sbjct: 182 MAAVDIAQVDQKTSHNLNEFSKHLGLMFQIKDDLLDVYGDEKK 224


>gi|145589885|ref|YP_001156482.1| polyprenyl synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048291|gb|ABP34918.1| farnesyl-diphosphate synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 304

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 129/242 (53%), Gaps = 18/242 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
                 +  +S+R ++ LD LL    +        RL  A+RYA  GG K+IR  LV   
Sbjct: 5   FQFQDWVIAHSQRAESALDRLLDSEKTI-----PHRLHEAMRYAAQGGGKRIRPLLVYAA 59

Query: 62  ASLFNVNHLTA--------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
             L N  +  A             AIECIH YSL+HDDLP MD+  +RRG+PTVH  +DE
Sbjct: 60  GQLGNSINEQADQEKNAALDAAAVAIECIHAYSLVHDDLPCMDDDDLRRGRPTVHKAFDE 119

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EF 171
            TA++ G+ L T AFEI+++ K     NIR  ++ +L    G +GM GGQ +D++   + 
Sbjct: 120 ATALLVGDALQTRAFEILANAK--CDANIRLAMISALAAASGSRGMAGGQAIDLESVGKK 177

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +D   +  +  MKTGAL+  A   G I A  S  +  +L  + E LG+ FQ+ DD+LD  
Sbjct: 178 LDLDGLKQMHAMKTGALLSCATALGGIAAGLSPAQMTQLLVYSEALGLAFQVVDDVLDAT 237

Query: 232 ED 233
            D
Sbjct: 238 AD 239


>gi|17546941|ref|NP_520343.1| geranyltranstransferase [Ralstonia solanacearum GMI1000]
 gi|17429241|emb|CAD15929.1| probable geranyltranstransferase (farnesyl-diphosphate synthase)
           protein [Ralstonia solanacearum GMI1000]
          Length = 299

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +     R ++ L+  L       ++    RL +A+RYA LG GK++R  L    
Sbjct: 2   SDFAHWMASVVARTESALERALP-----GESVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L   +      V  A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L T AF  ++     +    R+ L+  L    G  GM GGQ +D+Q     + +  +  
Sbjct: 117 ALQTQAFIALAELGA-VSPATRAGLVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+ A  +    E++  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231


>gi|258406530|ref|YP_003199272.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692]
 gi|257798757|gb|ACV69694.1| Dimethylallyltranstransferase [Desulfohalobium retbaense DSM 5692]
          Length = 322

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 16/222 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            ++D +      +    +  ++    + L  GGK++R  L    A  F         +  
Sbjct: 14  AIEDHIQSVLGEL----DPLIVPVASHVLGAGGKRLRPILCVLTAEAFGYRDKEVYPLAT 69

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H  +LIHDD+  +D   +RRG+P+ H+ +     ++AG+ LL  A + I+     
Sbjct: 70  ALELLHSATLIHDDI--LDGAALRRGQPSAHLAFGVQETVLAGDALLAMANKCIAGYGQP 127

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               I S+ +++  +   +      ++  +++  + E   F I   KT  L+  +CE GA
Sbjct: 128 ELMRIASEAIMATANGEIM------EIAQLREPRLSEEDYFQIITGKTAVLIQASCECGA 181

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           ++A A   +++  +  G NLGI FQL DD LD     ED  K
Sbjct: 182 VLAGAKGPQRQAAQDLGRNLGIAFQLVDDALDYTSAVEDSGK 223


>gi|148269899|ref|YP_001244359.1| polyprenyl synthetase [Thermotoga petrophila RKU-1]
 gi|281412220|ref|YP_003346299.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
 gi|61657360|emb|CAI44277.1| geranyltranstransferase [Thermotoga naphthophila RKU-10]
 gi|147735443|gb|ABQ46783.1| farnesyl-diphosphate synthase [Thermotoga petrophila RKU-1]
 gi|281373323|gb|ADA66885.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
          Length = 272

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 16/226 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
             ++++  + ++L      +          A+ Y A +GGK+IR  LV        V   
Sbjct: 2   KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L V  A+E  H  SLIHDDLP +DN   RRGKP+ H  Y E  A++AG+GL   AF  
Sbjct: 55  KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQ 114

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           IS           S+    L     +      + ++     I +  V  +   KTGAL  
Sbjct: 115 ISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKME-----ISQEMVERMYAFKTGALFA 169

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           F   +  I+    + +  +++  GE  G+ FQ+ DDL D      K
Sbjct: 170 FCFSAPFIL---KEKDHTKMKLLGEKFGVAFQIYDDLKDILGSFEK 212


>gi|148265763|ref|YP_001232469.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
 gi|146399263|gb|ABQ27896.1| Polyprenyl synthetase [Geobacter uraniireducens Rf4]
          Length = 322

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 13/232 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++     I   L ++ LQ    +Q+     +     Y L  GGK+IR  L+   A L   
Sbjct: 1   MEAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALLLLSAKLCGY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    + + + IE IH  +L+HDD+  +DN  +RRG  + +  +    +++ G+ L + +
Sbjct: 60  HGDRHVPLASVIEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++ +       ++    +LS    I  +G +  Q++   D  +   +   + K KT  
Sbjct: 118 FSLMVADG-----DLNVLKVLSGATTIIAEGEVL-QLVCTSDLDVTTERYIEVVKSKTAI 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           L+  AC+SGAI+  AS   +  L+ FG  LGI FQL DD LD    EE   K
Sbjct: 172 LLSAACQSGAILGKASSEREVALQNFGMELGIAFQLVDDTLDYVASEEQFGK 223


>gi|126179759|ref|YP_001047724.1| geranyltranstransferase [Methanoculleus marisnigri JR1]
 gi|125862553|gb|ABN57742.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Methanoculleus marisnigri JR1]
          Length = 321

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 17/230 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   L+ N++RID +L              H D   ++    L GGK++R  +V   A  
Sbjct: 4   LEDYLEMNAERIDKVLHRYF-------GDVHGDLFRASAHLLLAGGKRLRPAVVILAADA 56

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +    +    ++E  H ++LIHDD+  MD    RRG PTVH  +DE TAI+AG+ L
Sbjct: 57  VRKGSSDDLIPAALSLELTHNFTLIHDDI--MDGDAARRGVPTVHTIWDEPTAILAGDVL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMI 180
              AFE I   +      IR+  ML+ T       +  GQ +D+  E    + E +   +
Sbjct: 115 YAKAFEFICFSEAADAAKIRAVKMLART----CTDICEGQSMDMAFEKRHDVSEVEYLEM 170

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              KTG L   +   G I+A AS  + + L  +G N GI FQ+ DDL+D 
Sbjct: 171 VSKKTGVLYGASAAIGGILAGASPVQADALYQYGVNSGIAFQIQDDLIDL 220


>gi|253578524|ref|ZP_04855796.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850842|gb|EES78800.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 295

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 14/243 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN     +L + ++  + ++   L   A    T     +  A+ Y+ L GGK++R  L+ 
Sbjct: 1   MN--FQDELAKRTEETEKVIRSFLPAEAGFAGT-----MAQAMNYSMLAGGKRLRPMLIR 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   LF+          A +E IH +SLIHDDLP++D+   RRG+ T H  Y E   +++
Sbjct: 54  ETYRLFDGKEEVVKPFMAGMEMIHTHSLIHDDLPALDDDDYRRGRLTTHKVYGEAMGVLS 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEF--IDETQ 176
           G  LL YA+E +       K+  R    L  ++   G+ GMLGGQ +D++++   +++  
Sbjct: 114 GVALLNYAYETMFQAFALTKEQDRVIHALRVVSQKTGIHGMLGGQSVDVENDGKPLEKEM 173

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---ED 233
           +  I + KT AL+  +  +GAI+A A++ E   +     N+G+ FQ+ DD+LD     E+
Sbjct: 174 LDYIYRNKTSALIEASMMTGAILAGANEQEVSAVEKAAGNIGLAFQIQDDILDVTSTAEE 233

Query: 234 LPK 236
           L K
Sbjct: 234 LGK 236


>gi|295693200|ref|YP_003601810.1| geranyltranstransferase [Lactobacillus crispatus ST1]
 gi|295031306|emb|CBL50785.1| Geranyltranstransferase [Lactobacillus crispatus ST1]
          Length = 289

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 17/222 (7%)

Query: 19  ILDDLLLQTASHMQTQHND-RLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRV 75
           ++DD L   A H+ ++  D ++   + Y+++ GGK++R  L     +          +R+
Sbjct: 14  VIDDYL---AKHLASEVEDQKISQIMAYSVMAGGKRLRPLLFLATLNALGRKIEEPEIRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  ACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPMGIQWIAEGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190
                   ++L+  +T  +G  GM+GGQ LDI          D   +  ++ +KTG L+ 
Sbjct: 131 KS------AKLVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTGCLIQ 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 185 ASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVE 226


>gi|121998764|ref|YP_001003551.1| polyprenyl synthetase [Halorhodospira halophila SL1]
 gi|121590169|gb|ABM62749.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1]
          Length = 307

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
             L + L    +R +  L+  L    +H        +  A+RYA+LGG K++R  LV   
Sbjct: 11  EALEAALPPLRERAERALEAALPAADAH-----PTGIHEAMRYAVLGGGKRMRPILVYAT 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               +           A+E IH YSL+HDDLP+MD+  +RRG+PT H  YDE TAI+ G+
Sbjct: 66  GQALDHTGRALDAPACAVEMIHAYSLVHDDLPAMDDDDLRRGQPTCHRAYDEPTAILVGD 125

Query: 122 GLLTYAFEIISSPKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
            L   AFE+++  + +       R+ ++ +L    G  GM+GGQ +D       +D  ++
Sbjct: 126 ALQARAFELLADGEREGAPAPAARAGMVHALARAAGSGGMVGGQAIDLAAVGRQLDAAEL 185

Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED--- 233
             +   KTGAL+  + + GA+ +  +       L  + + +G+ FQ+ DD+LD E D   
Sbjct: 186 EDMHIHKTGALIRASVQLGALASGPTCAATLNALDRYAKCVGLAFQIHDDVLDVEGDADA 245

Query: 234 LPKK 237
           L K+
Sbjct: 246 LGKE 249


>gi|188581709|ref|YP_001925154.1| polyprenyl synthetase [Methylobacterium populi BJ001]
 gi|179345207|gb|ACB80619.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
          Length = 320

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 101/238 (42%), Positives = 143/238 (60%), Gaps = 7/238 (2%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTE 60
            G    +L   +  ++T L DLL  T    +     RL+ A+R+A+LGG K++R FL  E
Sbjct: 17  TGDFTHRLAGVADTVETFLVDLLGPTLQTGEIARPPRLMEAMRHAVLGGGKRLRPFLAIE 76

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A +       AL  GA +E +HCYSL+HDDLP+MD+  +RRGKPTVH  YDE TAI+ G
Sbjct: 77  TARMLGGAEDAALAAGAGVELVHCYSLVHDDLPAMDDDDLRRGKPTVHKAYDEATAILVG 136

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------IDE 174
           + L T AFE+ + P+ Q    IR++L+L L    GL GM+GGQ+LD+  E       +D 
Sbjct: 137 DALQTLAFEVTADPRWQPDPMIRAELVLGLARASGLGGMVGGQLLDLSAEGRFGPADMDI 196

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                +Q MKTGA++ F+ E+GA++  A   E+  L  +G+ LG  FQ+ADD+LD E 
Sbjct: 197 DDTLRMQAMKTGAILAFSVEAGALVGGAGAEERAALLRYGKALGQAFQVADDILDREA 254


>gi|117926629|ref|YP_867246.1| trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1]
 gi|117610385|gb|ABK45840.1| Trans-hexaprenyltranstransferase [Magnetococcus sp. MC-1]
          Length = 331

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 16/235 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L S ++++ +R + ++ + L      + TQ  D LL++      GGK++R  L    A
Sbjct: 10  ARLRSLVEQDLQRTNEVILEQLNSPV-ELITQVGDHLLNS------GGKRLRPILTLVTA 62

Query: 63  SLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            LF         +  A +E IH  +L+HDD+  +D    RRG+ T +  +     I+ G+
Sbjct: 63  KLFGYQKADVHALLAAVVEFIHTATLLHDDV--VDKSNTRRGQATANSVWGNKAPILVGD 120

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + +F+I+         ++R   ++S    I  +G +  Q++   D   DE +   + 
Sbjct: 121 FLFSRSFQIMVEHG-----DLRVLRIVSDCCAIISEGEVM-QLVASNDLATDEERYLDVI 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KT +L   A + GA++A  S    +R+  +G  LG  +Q+ DDLLD   +  K
Sbjct: 175 RHKTASLFASASQLGAVVADQSDEIAQRMYDYGMMLGTAYQVVDDLLDYSAETEK 229


>gi|319899203|ref|YP_004159296.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73]
 gi|319403167|emb|CBI76726.1| octaprenyl-diphosphate synthase [Bartonella clarridgeiae 73]
          Length = 338

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A +F       +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRIRPMITLAAAHMFGYQGDKHIKLATAVEFMHTATLLHDDV--VDESELRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +     + +  +L+    I  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFKMMVDVGS-----LEALSVLANAAAIIAEGEVM-QLSAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   + +    I   KT AL   A E G I+A     E+  L  +G +LG+ FQL DD+L
Sbjct: 169 NIETNVSNYLKIINAKTAALFSAAAEVGPIIAGYGHEERSALHQYGLSLGVAFQLIDDVL 228

Query: 229 DCEE 232
           D   
Sbjct: 229 DYSS 232


>gi|170288584|ref|YP_001738822.1| polyprenyl synthetase [Thermotoga sp. RQ2]
 gi|61657510|emb|CAI44421.1| geranyltranstransferase [Thermotoga sp. RQ2]
 gi|170176087|gb|ACB09139.1| Polyprenyl synthetase [Thermotoga sp. RQ2]
          Length = 272

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 16/226 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
             ++++  + ++L      +          A+ Y A +GGK+IR  LV        V   
Sbjct: 2   KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L V  A+E  H  SLIHDDLP +DN   RRGKP+ H  Y E  A++AG+GL   AF  
Sbjct: 55  KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQ 114

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           IS           S+    L     +      + ++     I +  V  +   KTGAL  
Sbjct: 115 ISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKME-----ISQEMVERMYAFKTGALFA 169

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           F   +  I+      +  +++  GE  G+ FQ+ DDL D      K
Sbjct: 170 FCFSAPFILKG---KDHTKMKLLGEKFGVAFQIYDDLKDILGSFEK 212


>gi|163737897|ref|ZP_02145313.1| branched-chain amino acid aminotransferase [Phaeobacter
           gallaeciensis BS107]
 gi|163743327|ref|ZP_02150707.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis
           2.10]
 gi|161383321|gb|EDQ07710.1| geranylgeranyl pyrophosphate synthetase [Phaeobacter gallaeciensis
           2.10]
 gi|161388513|gb|EDQ12866.1| branched-chain amino acid aminotransferase [Phaeobacter
           gallaeciensis BS107]
          Length = 299

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/229 (40%), Positives = 133/229 (58%), Gaps = 12/229 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +     L D   +  +HM  +   +D L +A+RYA+ GGK +R FLV E A L  V    
Sbjct: 15  RPFAQALKDAQTRITTHMDARLGGDDALHAAMRYAVTGGKMLRGFLVLESARLHGVAEAA 74

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL    AIECIH YSL+HDDLP MD+  +RRG+PTVH ++DE  A++AG+ L T+AFE++
Sbjct: 75  ALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDSLQTFAFELL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGA 187
           + P+         + +       G  GM+ GQMLDI  E     +D  Q+  +Q  KTG 
Sbjct: 135 ADPRIGPHALTLIRGL---AQASGKDGMVSGQMLDIAAETATRPLDLEQITHLQNRKTGC 191

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+ ++  +GA+MA A +     LR + + LG+ FQ+ADD+LD E D  K
Sbjct: 192 LISWSATAGAVMAGADE---APLRRYADALGLAFQIADDILDVEGDAAK 237


>gi|152995175|ref|YP_001340010.1| polyprenyl synthetase [Marinomonas sp. MWYL1]
 gi|150836099|gb|ABR70075.1| Polyprenyl synthetase [Marinomonas sp. MWYL1]
          Length = 293

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/235 (39%), Positives = 134/235 (57%), Gaps = 10/235 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           L + S+     +DD L       +      L +A+ Y+L  GGK++R  L    ASLF  
Sbjct: 3   LNDFSQYARRRVDDYLTLNLGQYEP--ATHLQNAMAYSLFNGGKRVRPMLTYAAASLFGE 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +       AAIE IH YSLIHDDLP+MD+  +RRGKPT HIQYDE TAI+AG+ L T+A
Sbjct: 61  ANNLTDASAAAIESIHAYSLIHDDLPAMDDDDLRRGKPTCHIQYDEATAILAGDALQTFA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE++S+PK Q    ++ QL+  L H  G  GM+ GQM+D+ +    I+  ++  + + KT
Sbjct: 121 FELLSNPKHQ-STKVQLQLIQELVHASGRHGMVTGQMIDLANVGNSINIDELEQMHQHKT 179

Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           GAL+  +   GAI   A S+ +   L  +   +G+ FQ+ DD++D   D   L K
Sbjct: 180 GALIRASIRMGAISTGAKSEADFAALDAYAAAIGLAFQVQDDIIDITSDTTTLGK 234


>gi|319651348|ref|ZP_08005477.1| HepT protein [Bacillus sp. 2_A_57_CT2]
 gi|317396879|gb|EFV77588.1| HepT protein [Bacillus sp. 2_A_57_CT2]
          Length = 320

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 16/223 (7%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           T++++ L +T        +  L  A  + L  GGK+IR   V   A     +      V 
Sbjct: 15  TVIENELEETIK----AESPLLHQASLHLLQAGGKRIRPVFVLLAAKFGEYDIDKIKNVA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            ++E IH  SL+HDD+  +D+  +RRG+PT+  ++D   A+  G+ +   A E+I++ K 
Sbjct: 71  VSLELIHMASLVHDDV--IDDAELRRGQPTIKAKWDNKIAMYTGDYIFARALELITNIK- 127

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
               N  +  +LS T      G +  Q+ D  +   +    F   K KT  L+  +C+ G
Sbjct: 128 ----NPHAHKILSHTLVELCIGEIE-QIKDKYNYDQNIRTYFRRIKRKTAMLIAVSCQLG 182

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            I A+  ++  ++L  FG  +G+ +Q+ DD+LD      +L K
Sbjct: 183 GIAANVEEDIHKKLFKFGYFVGMSYQIIDDVLDFVGTEKELGK 225


>gi|121534498|ref|ZP_01666321.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306991|gb|EAX47910.1| Polyprenyl synthetase [Thermosinus carboxydivorans Nor1]
          Length = 221

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 9/211 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L +  Q+ +  +D  L  L+ + A +++T     +  A+RY+L  GGK++R  L+   A 
Sbjct: 4   LKAYCQQKAALVDEALARLVPRQAGYLET-----VYEAMRYSLFAGGKRLRPILLMAAAD 58

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    L V   +E IH YSLIHDDLP+MDN   RRGKPT H  + E  AI+AG+GL
Sbjct: 59  AVGGRGSQYLHVACGLEMIHTYSLIHDDLPAMDNDDFRRGKPTSHRVFGEGMAILAGDGL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           LT AFE++ S +  ++  +  +++  +    G  GM+GGQ +D+  E   +D   +  + 
Sbjct: 119 LTAAFEVMLS-QPGVEPGVLLKVVREIAQAAGPAGMVGGQAVDLAAEGKVLDADALKFMH 177

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRC 212
           + KTGAL   A  +GA++A  S ++ E L  
Sbjct: 178 QAKTGALFRAALRAGALLAGGSNSQIEALTA 208


>gi|85858101|ref|YP_460303.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / decaprenyl diphosphate synthase
           [Syntrophus aciditrophicus SB]
 gi|85721192|gb|ABC76135.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / decaprenyl diphosphate synthase
           [Syntrophus aciditrophicus SB]
          Length = 324

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 13/233 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           ++Q+   R    L  +  +   H++++    +   + + L  GGK+ R  L+   A LF 
Sbjct: 2   QIQDVFSRYGAELKRVEEEMEFHLRSEVA-IIPEIVTHLLGSGGKRFRPLLLLISADLFG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   + A +E IH  SL HDD+  +D    RRGK + +  +     ++ G+ L + 
Sbjct: 61  YQGRRCHTLSAVLEFIHTASLFHDDV--IDKAESRRGKVSANNIWGNAAVVLVGDFLYSK 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A+++++   +     +    ++S T N+  +G +  Q++   +  + E     I + KT 
Sbjct: 119 AYQLMAEDGS-----MEIMHLISTTSNVMSEGEVF-QLIKCGEVNLTEEDYLKIIEKKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            L+  AC  G  +  A  ++ E L+ FG  LG  FQ+ DD LD    EED  K
Sbjct: 173 ILISAACALGGYLGGAEVHQIEALKQFGLRLGSAFQMTDDTLDYVAREEDFGK 225


>gi|268680553|ref|YP_003304984.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618584|gb|ACZ12949.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 286

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 5/223 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-L 70
           +SK I    +  L +    +++ H     +      +GGK+ R  L+             
Sbjct: 2   SSKAIVEKFEAFLKRELPVVESFHPHFNQAFGEMLDVGGKRFRPLLLLSVVEASAPLLFE 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL V   +E +H YSLIHDDLP MDN  +RRG PT+H+ YDE TA++ G+ L T+AF  
Sbjct: 62  NALHVSLGLEMMHTYSLIHDDLPCMDNAALRRGHPTLHVTYDETTAVLIGDALNTHAFYR 121

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGAL 188
           I++    L   I+ +L+  L  + G+ GM+ GQ LD   +D+ +D  Q+  +   KT  L
Sbjct: 122 IANA--PLSAEIKVRLVSILAGDAGIYGMVLGQALDCFFEDKRLDVEQLSFLHVHKTAKL 179

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +  +   GA++    +  +E +  FG  LG++FQ+ DD++D  
Sbjct: 180 IAASLLMGAVICELDKATQETVYAFGLRLGLLFQIQDDIIDAT 222


>gi|62260098|gb|AAX77879.1| unknown protein [synthetic construct]
          Length = 360

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 15/232 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +  K I  ++ + +      +      +  L++ I + ++  GGK++R  LV   A   N
Sbjct: 28  QQLKDIQALIKEDIQNNNQFIVDSLCSDVVLINQISHYIINSGGKRLRPLLVMLFARALN 87

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    L   A IE IH  +L+HDD+  +D+  +RRGK T +  +    +++ G+ L + 
Sbjct: 88  YNGDKHLACAAIIEFIHTATLLHDDV--VDDSQLRRGKQTANNVFGNAASVLTGDFLYSR 145

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++ S      DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT 
Sbjct: 146 AFQMMVSL-----DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTA 199

Query: 187 ALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
            L   ACE   +++   Q+  +   R++ +G  LG  FQ+ADD+LD   D  
Sbjct: 200 KLFEAACELAGVISLDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 251


>gi|152978590|ref|YP_001344219.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
 gi|150840313|gb|ABR74284.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
          Length = 330

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N          A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 50  GGKRIRPMIALLAARALNYEGEKMPVCAAFIEFIHTASLLHDDV--VDESDMRRGRATAN 107

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++   +     ++   ++S   N+  +G +  Q++++ 
Sbjct: 108 AAFGNAASVLVGDFIYTRAFQLMAKLNS-----LKMLTIMSDATNVLAEGEV-QQLMNVN 161

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + ++ AIMA+A +  +  L+ +G  LG  FQL DD+L
Sbjct: 162 DPETTEENYMKVIYRKTARLFEVSTQAAAIMANADEKIESALQQYGRYLGTAFQLVDDVL 221

Query: 229 DCEE 232
           D   
Sbjct: 222 DYSA 225


>gi|93007052|ref|YP_581489.1| polyprenyl synthetase [Psychrobacter cryohalolentis K5]
 gi|92394730|gb|ABE76005.1| farnesyl-diphosphate synthase [Psychrobacter cryohalolentis K5]
          Length = 360

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 25/224 (11%)

Query: 33  TQHNDRLLSAIRYALLG-GKKIRSFLVTEC------------------ASLF--NVNHLT 71
            +    LL A RY + G GK +R  LV                     ASL   + ++  
Sbjct: 67  AELPSPLLDACRYVMTGTGKLVRPLLVASAFSSTYSHNDTIADKDNALASLLENDSDYDM 126

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R   A+E +H YSL+HDDLP MD+  +RRG+PT HI ++E TA++AG+ L T AFE++
Sbjct: 127 CRRAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFEESTALLAGDVLQTLAFEVL 186

Query: 132 -SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGA 187
            +   T    +      L        + M+ GQMLD+  E    I +  +  I + KTGA
Sbjct: 187 TADLPTFAPFDSAIASQLFAIFAPRARRMVSGQMLDLNAEATTGISQNDLEAIHRDKTGA 246

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+  A   G I A A+  ++  L+   +++G+ FQ+ DD+LD  
Sbjct: 247 LIEAAMLMGGICAGATAPQRMALQECAQHIGLAFQVQDDILDVT 290


>gi|46908163|ref|YP_014552.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|254931899|ref|ZP_05265258.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
 gi|46881433|gb|AAT04729.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|293583451|gb|EFF95483.1| heptaprenyl diphosphate synthase [Listeria monocytogenes HPB2262]
 gi|328472773|gb|EGF43622.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes 220]
          Length = 321

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++HDD+  +DN  +RRG+ T+  ++    A+  G+ L
Sbjct: 60  APNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETIKSKWGNHIAMYTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 172 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|15642935|ref|NP_227976.1| geranyltranstransferase [Thermotoga maritima MSB8]
 gi|4980655|gb|AAD35254.1|AE001701_7 geranyltranstransferase [Thermotoga maritima MSB8]
          Length = 272

 Score =  183 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 16/226 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
             ++++  + ++L      +          A+ Y A +GGK+IR  LV        V   
Sbjct: 2   KKEKVEERIREILRPGWDLLTE-------EAMLYSATVGGKRIRPLLVLTLGEDLGVEEE 54

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L V  A+E  H  SLIHDDLP +DN   RRGKP+ H  Y E  A++AG+GL   AF  
Sbjct: 55  KLLDVAVAVELFHTASLIHDDLPPIDNADFRRGKPSCHRTYGEDIALLAGDGLFFLAFSQ 114

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           IS           S+    L     +      + ++     + +  V  +   KTGAL  
Sbjct: 115 ISKIGNSKIFEEFSETAYKLLLGEAMDVEFERRKME-----VSQEMVERMYAFKTGALFA 169

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           F   +  I+      +  +++  GE  G+ FQ+ DDL D      K
Sbjct: 170 FCFSAPFILKG---KDHTKMKLLGEKFGVAFQIYDDLKDILGSFEK 212


>gi|229845932|ref|ZP_04466044.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1]
 gi|229810936|gb|EEP46653.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 7P49H1]
          Length = 323

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 95/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    ET    +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSETNYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVL 214

Query: 229 DCEE 232
           D   
Sbjct: 215 DYSA 218


>gi|308070091|ref|YP_003871696.1| geranyltranstransferase [Paenibacillus polymyxa E681]
 gi|305859370|gb|ADM71158.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
           synthase) [Paenibacillus polymyxa E681]
          Length = 792

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 9/242 (3%)

Query: 1   MNGGLPSKLQENSKRIDTI------LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKI 53
           M   L +  +E    ++T+      +++ L  T  H      ++L+ A  Y+L G GK+I
Sbjct: 488 MITQLKNDSREKEDFMNTVETVRDQINNQLKITKPHGIEAMKEQLIDAANYSLEGDGKRI 547

Query: 54  RSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           R  L      + + ++    + +  ++E +H  SLI DDLPS DN   RRG+ T+H  ++
Sbjct: 548 RPILTWVMGVNEYGLDASAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRQTLHKVHN 607

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
             TA + G  L+  A    SS  +Q        L+           M     LD + + +
Sbjct: 608 SATAELTGLYLIQKAIGEQSSL-SQFNAETVLALIQYSAQKAEDMCMGQAMDLDSKGKAL 666

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              Q+ M+   KTG          A++A A + E   L+ F  ++GI FQ+ DDLLD E 
Sbjct: 667 TLEQLNMMCFYKTGVAFEACLVMPAMLAQAEEPEIAALQKFAYHMGIAFQIKDDLLDVEG 726

Query: 233 DL 234
           D+
Sbjct: 727 DM 728


>gi|119383153|ref|YP_914209.1| polyprenyl synthetase [Paracoccus denitrificans PD1222]
 gi|119372920|gb|ABL68513.1| farnesyl-diphosphate synthase [Paracoccus denitrificans PD1222]
          Length = 287

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 18/237 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L E   ++   LD         M       L  A+RYA +GGK+IR+FLV E A LF +
Sbjct: 4   RLDEVKTQVQAALD-------GAMAGLPEGELTDAMRYACIGGKRIRAFLVMESARLFGL 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +L V AA+E +H YSL+HDDLPSMD+  +RRG PTVH+++ E TAI+AG+ L + A
Sbjct: 57  RDRESLPVAAAVEALHAYSLVHDDLPSMDDDDLRRGLPTVHVRWSEATAILAGDALQSLA 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKM 183
           F +++  +      IR  L+   +  +G +GM+ GQ LDI  E     +D   +  +Q+ 
Sbjct: 117 FGLLTDAQIG-APEIRLALVSGFSEAVGGRGMVWGQALDIAAETAVEPLDLMAIKRLQQA 175

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           KTGAL+ F+  +GA+MA         L  +  NLG+ FQ+ DD+LD      D  K+
Sbjct: 176 KTGALIQFSATAGAVMAGQDTG---PLAEYARNLGLAFQIHDDVLDVTGNEADTGKR 229


>gi|85712490|ref|ZP_01043538.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
 gi|85693624|gb|EAQ31574.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
          Length = 323

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L               L +   IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLAVLSCRALGYEGRAHLSLATIIEFIHTATLLHDDV--VDESELRRGRKTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AF+++        D++    +L+   N+  +G +  Q+++  
Sbjct: 101 AVFGNEASVLVGDFLYTRAFQMMVQL-----DSMTILSILADATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E + F +   KT  L   A +   ++        E+L  +G  LG  FQL DDL+
Sbjct: 155 DPDTTEARYFDVIYGKTAKLFEAATQLAGVLTEQDSTVTEQLADYGRYLGTAFQLVDDLM 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTSD 219


>gi|193212799|ref|YP_001998752.1| polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086276|gb|ACF11552.1| Polyprenyl synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 324

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 21/237 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           +   +  +L+   +R  T+L               N  +    RY L   GK+IR  LV 
Sbjct: 6   VTSSVAEELKLFQERYKTVLHS------------SNTLVDKVTRYVLRQQGKQIRPTLVI 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +         R    +E +H  +LIHDD+  +D   +RRG P+++  +    +++ 
Sbjct: 54  LGAKVCGGVGDVTYRGAIMVELLHSATLIHDDV--VDGAEMRRGIPSINALWKNKISVLI 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL+               ++ S+ +  ++    L      Q+   +   I E     
Sbjct: 112 GDYLLSKGLLYSLENSDYRSLHLVSEAVRRMSEGEIL------QIQKTRSLDITEEDYLS 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +   KTG+L+  +C  GA  A  S+ E  RL+ +GE LG+ FQ+ DDLLD   D  K
Sbjct: 166 VIADKTGSLIATSCAIGAASATDSEEEIARLKHYGEFLGLAFQIRDDLLDYTGDSKK 222


>gi|332140074|ref|YP_004425812.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|332143128|ref|YP_004428866.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550096|gb|AEA96814.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327553150|gb|AEA99868.1| Geranylgeranyl pyrophosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 324

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 96/187 (51%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    +++     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLTVLSARAMGIDNNEHHTLAAIVEFIHTATLLHDDV--VDESTMRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++ S K      +R   +LS   N   +G +  Q+++  
Sbjct: 101 AIFGNQASVLVGDFLYTRSFQMMVSLK-----RMRVMEILSEATNQIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E + F +   KT  L   A +  A++   +++ +  ++ +G++LG  FQLADD+L
Sbjct: 155 DAGTTEARYFDVIYGKTARLFEAATQLAAVLTEQNEHIERAMQEYGKHLGTAFQLADDIL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYMADSE 221


>gi|288931868|ref|YP_003435928.1| dimethylallyltranstransferase [Ferroglobus placidus DSM 10642]
 gi|288894116|gb|ADC65653.1| Dimethylallyltranstransferase [Ferroglobus placidus DSM 10642]
          Length = 318

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 18/233 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           ++E  KR + + D++       +  +  ++L  A R+ +  GGK++R  L          
Sbjct: 3   VEEIKKRAEIVNDEI----KKFLPVKEPEKLYKAARHLINAGGKRLRPVLSLIACEAIER 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   L    AIE +H ++LIHDD+  MD   +RRG  TVH  Y   TAI+AG+ L   A
Sbjct: 59  DYRKILPAAVAIEVVHNFTLIHDDI--MDEDELRRGVKTVHTIYGVPTAILAGDTLFAEA 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMK 184
           F+I+S  + + ++ +     L          +  GQ +DI   + EF+ E +   + + K
Sbjct: 117 FKIMSYCEVESENLVNGMRKL----AEVCVEICEGQQMDIEFEEREFVSEEEYLEMVRKK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           T  L+  +    AI+    +  ++ L  +G N GI FQ+ DD+LD    L K+
Sbjct: 173 TSVLIALSSSIPAILFG-EKKYEKALWNYGINAGIAFQIKDDILDL---LGKE 221


>gi|78484685|ref|YP_390610.1| trans-hexaprenyltranstransferase [Thiomicrospira crunogena XCL-2]
 gi|78362971|gb|ABB40936.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2]
          Length = 321

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 12/191 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +      L + A IE IH  +L+HDD+  +D    RRG  T +
Sbjct: 43  GGKRLRPLLVLLSAHACDYKGKDHLTLAAVIEFIHTSTLLHDDV--VDESETRRGNQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++  P       +R   ++S T N+  +G +  Q+L+  
Sbjct: 101 EVWGNAASVLVGDFLYSRSFEMMVEPGI-----MRVMEVMSETTNVIAEGEVL-QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D      +   +   KT  L   A   G I+       +     +G +LG  FQL DD L
Sbjct: 155 DADTTSQRYMEVIHRKTAKLFEAATLLGPIL-GKKPELESAFSSYGRHLGAAFQLIDDAL 213

Query: 229 DCEED---LPK 236
           D   D   L K
Sbjct: 214 DYTADADELGK 224


>gi|332312370|gb|EGJ25465.1| Trans-hexaprenyltranstransferase [Listeria monocytogenes str. Scott
           A]
          Length = 324

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 9   LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++HDD+  +DN  +RRG+ T+  ++    A+  G+ L
Sbjct: 63  APNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETIKSKWGNHIAMYTGDFL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 121 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 175 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230


>gi|289625167|ref|ZP_06458121.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289651351|ref|ZP_06482694.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|298485383|ref|ZP_07003473.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298160081|gb|EFI01112.1| octaprenyl diphosphate synthase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330869163|gb|EGH03872.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330988777|gb|EGH86880.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 322

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|78485732|ref|YP_391657.1| polyprenyl synthetase [Thiomicrospira crunogena XCL-2]
 gi|78364018|gb|ABB41983.1| farnesyl-diphosphate synthase [Thiomicrospira crunogena XCL-2]
          Length = 291

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 87/231 (37%), Positives = 130/231 (56%), Gaps = 9/231 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           + + L     R++  L  LL Q     QT +   LL AI+YA L  GK++R  LV     
Sbjct: 1   MKTTLLRYQNRVNQKLKALLDQ-----QTSYPASLLEAIKYATLNNGKRLRPALVYAVGE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N++         A+E IH YSL+HDDLP+MD+  +RRG+PT HIQ+DE TAI+ G+  
Sbjct: 56  SMNISLDKLDAAACAVELIHSYSLVHDDLPAMDDDDLRRGQPTCHIQFDEATAILVGDAQ 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
            T AFE +S     L D+ + +L+  L+H  G  GM+GGQ++DIQ      + +Q+  + 
Sbjct: 116 QTLAFEALSQ-DAFLADSDKVKLITLLSHASGGAGMIGGQIIDIQSNGHLPELSQLQKMH 174

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +MKTGAL+  +   GA  +     ++  L   G+ +G+ FQ+ DD+LD E 
Sbjct: 175 EMKTGALITASLLMGAAQSTHYPEKQPGLAKLGQKIGLAFQIHDDILDIEG 225


>gi|305662643|ref|YP_003858931.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230]
 gi|304377212|gb|ADM27051.1| Dimethylallyltranstransferase [Ignisphaera aggregans DSM 17230]
          Length = 346

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 9/228 (3%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E + RI  I+D+ ++ T   + +   +   +A+ Y   GGK++R  +V   A +   +  
Sbjct: 20  EYASRISKIVDEFIMNTIRGIPSTLYE---AALHYLRAGGKRLRPLIVVLGARIVGGDED 76

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+   A++E +H ++L+HDD+  +D   +RRG PTVH  +    AI+AG+ L  Y++  
Sbjct: 77  IAIPGAASVEVLHTFTLVHDDI--IDKDELRRGVPTVHKIWGSDMAIVAGDLLYAYSYRC 134

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGA 187
           +     +     R    + +  +  +  +  GQ LD+     + +       + K KT A
Sbjct: 135 LLRALERGVPVERVNKAIDILTDAAIT-VAEGQALDMLLPSMQNVSINDYIEMVKKKTAA 193

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L   +   GA +A   +     L+    N GI FQ+ DD+L    D  
Sbjct: 194 LFASSIAIGATLAGGDEKLTAILKESMINAGIAFQIRDDILGLIGDEK 241


>gi|257487512|ref|ZP_05641553.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 322

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|47094453|ref|ZP_00232133.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes str. 4b H7858]
 gi|226224534|ref|YP_002758641.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes Clip81459]
 gi|254825575|ref|ZP_05230576.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           J1-194]
 gi|254852833|ref|ZP_05242181.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           R2-503]
 gi|254993471|ref|ZP_05275661.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes FSL J2-064]
 gi|255521040|ref|ZP_05388277.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes FSL J1-175]
 gi|300763760|ref|ZP_07073757.1| heptaprenyl diphosphate syntase component II [Listeria
           monocytogenes FSL N1-017]
 gi|47017168|gb|EAL08021.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes str. 4b H7858]
 gi|225876996|emb|CAS05705.1| Putative heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258606162|gb|EEW18770.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           R2-503]
 gi|293594818|gb|EFG02579.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           J1-194]
 gi|300515496|gb|EFK42546.1| heptaprenyl diphosphate syntase component II [Listeria
           monocytogenes FSL N1-017]
          Length = 321

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++HDD+  +DN  +RRG+ T+  ++    A+  G+ L
Sbjct: 60  APNADFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETIKSKWGNHIAMYTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 172 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|88799582|ref|ZP_01115158.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Reinekea sp. MED297]
 gi|88777667|gb|EAR08866.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
           synthase) [Reinekea sp. MED297]
          Length = 293

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 128/236 (54%), Gaps = 12/236 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L + L E    +++ L     Q  S       D L SAI Y+LL GGK++R  LV   + 
Sbjct: 3   LETFLTETKSSLESALTQSFQQGVS-------DELTSAIHYSLLNGGKRLRPSLVRAASD 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L        L    A+E IH YSL+HDDLP+MD+  +RRGKPT H Q+ E TAI+AG+ L
Sbjct: 56  LVRAPDGLWLIPAQALEMIHVYSLVHDDLPAMDDDDLRRGKPTCHRQFSEATAILAGDAL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
            + AF +I+  +      IR  ++  L  + G +GM+GGQM+D+  E   +   ++  + 
Sbjct: 116 QSEAFALIAGAEALSPRQIR-DMVRLLAQSAGARGMVGGQMIDLASEQKTLTLNELSDLH 174

Query: 182 KMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           ++KTGAL+  + + GA+           RL  +G+ +G+ FQ+ADD+LD      K
Sbjct: 175 RLKTGALISASLQLGALCHDSVDVEILARLARYGDAIGLAFQIADDILDVTGTTEK 230


>gi|322418219|ref|YP_004197442.1| poluprenyl synthetase [Geobacter sp. M18]
 gi|320124606|gb|ADW12166.1| Polyprenyl synthetase [Geobacter sp. M18]
          Length = 322

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 10/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +      I   L ++ LQ    +Q+     +     Y L  GGK+IR  LV   A L   
Sbjct: 1   MDAALALIGEDLKNVELQFKKDLQSDVP-LIRKVGEYVLSSGGKRIRPALVLLAARLCGY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   ++ + + +E IH  +L+HDD+  +DN  +RRG  + +  +    +++ G+ L + +
Sbjct: 60  DGSRSVPLASVVEFIHTATLLHDDV--VDNANLRRGLASANTLWGNEASVLVGDFLFSKS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++ +       ++    +L+    +  +G +  Q++   D  I   +   + + KT  
Sbjct: 118 FSLMVTDG-----DLGILKVLADATTMIAEGEVL-QLVCTSDLDITVERYIEVVRSKTAI 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  ACE GAI+  A    ++ +  +G +LGI FQL DD LD   
Sbjct: 172 LLSAACEVGAILGGAEPGLRQAVADYGMDLGIAFQLMDDTLDYTA 216


>gi|288941872|ref|YP_003444112.1| trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180]
 gi|288897244|gb|ADC63080.1| Trans-hexaprenyltranstransferase [Allochromatium vinosum DSM 180]
          Length = 322

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 19/227 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           + E++K +D ++   L         Q +  L++ I + ++  GGK++R   V   A    
Sbjct: 10  VAEDTKAVDALILRRL---------QSDVVLINQIGHYIVNSGGKRLRPLSVLLAARACG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + + A +E IH  +L+HDD+  +D   +RR + T ++ +    +++ G+ L + 
Sbjct: 61  YTGERHIDLAAIVEFIHTSTLLHDDV--VDGSELRRNRETANVVWGNDASVLVGDFLYSR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +FE++         N+R   +L+   N   +G +  Q+L+ +D   DE +   +   KT 
Sbjct: 119 SFEMMVDVG-----NMRVMEVLAHATNRIAEGEVL-QLLNERDPDTDEARYMEVISRKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L       GA++A +    +E +R +G  LGI FQL DD LD   D
Sbjct: 173 TLFEAGTRLGAVIAESPPEIEEAIREYGLRLGIAFQLVDDALDYSVD 219


>gi|49083716|gb|AAT51120.1| PA4569 [synthetic construct]
          Length = 323

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E+   +D I+   L      ++    D ++SA      GGK++R  LV          
Sbjct: 10  VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + A IE +H  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L   +F
Sbjct: 63  GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++    +     +    ++S    +  +G +  Q+  ++D    E     + + KT  L
Sbjct: 121 EMMVELGS-----MPVMRIISQATRVIAEGEVL-QLSKVRDASTTEETYMEVIRGKTAML 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              +  S A +  A + + E LR FG+ LGI FQL DDLLD   D  
Sbjct: 175 FEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAA 221


>gi|327440778|dbj|BAK17143.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
           StLB046]
          Length = 324

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 21/231 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + ++ + + I+  L+  L  ++SH+    +  LL A      GGK+IR       A  
Sbjct: 9   LYADIKSDIEVIENELEQAL-NSSSHLLNDASVHLLQA------GGKRIRPVFTLLSAKF 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            + N      +   +E IH  SL+HDD+  +DN  +RRG+ TV  Q++   A+  GN + 
Sbjct: 62  GDYNIDRMKNIAVPLELIHMGSLVHDDV--IDNSDMRRGRETVKAQWNNRVAMYTGNFIF 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQ 181
             A + ++S +      I ++ M+          ++ G+++ I+D+F         F   
Sbjct: 120 ARALQYVTSIENPRAHQILAKTMVE---------LVNGEVIQIEDKFRLDQSLKDYFRRI 170

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           K KT  L+  +CE GA+++ A +     L+ +G  +G+ FQ+ DD+LD   
Sbjct: 171 KRKTALLIESSCELGAVVSGADEKTARHLKRYGYFVGMSFQIVDDILDFTA 221


>gi|238898823|ref|YP_002924505.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229466582|gb|ACQ68356.1| octaprenyl diphosphate synthase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 310

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 8/182 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   N      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 30  GGKRIRPMISILSARALNYKGDQHIIVAALIEFIHTATLLHDDV--VDKSDLRRGKKTAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++   +     +R   ++S   N+  +G +  Q++   
Sbjct: 88  TVFGNSASVLVGDFIYTRAFQMMTDLGS-----MRILKVMSSATNVISEGEV-QQLMYCN 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S AI+A AS  ++  L+ +G  LG  +QL DDLL
Sbjct: 142 NVNITEYDYMKVIYSKTARLFEAASQSAAILAKASPEQESALQSYGCYLGTTYQLIDDLL 201

Query: 229 DC 230
           D 
Sbjct: 202 DY 203


>gi|253998223|ref|YP_003050286.1| trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4]
 gi|253984902|gb|ACT49759.1| Trans-hexaprenyltranstransferase [Methylovorus sp. SIP3-4]
          Length = 322

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 17/230 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECAS 63
           + S + ++ + +D ++   L     H      +++     Y + GG K++R  LV   A 
Sbjct: 6   IKSCIAQDMQAVDAVIRKSL-----HSDVVLINQVAE---YIINGGGKRLRPALVLLSAG 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F   +     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ +
Sbjct: 58  AFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATANTLFGNAASVLVGDFI 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++        +++R   +L+   NI  +G +  Q+L++ D  I +     +   
Sbjct: 116 YSRAFQMMVG-----VESMRVMEVLAEATNIIAEGEVL-QLLNVHDADITDEAYLKVIHY 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT  L   A   GAI+  AS+ +++ +  +G  LG  FQL DD+LD   D
Sbjct: 170 KTAKLFEAATRLGAIICAASEQDEQAMAEYGMRLGTAFQLIDDVLDFSGD 219


>gi|260461502|ref|ZP_05809749.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259032572|gb|EEW33836.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 305

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 111/233 (47%), Positives = 151/233 (64%), Gaps = 3/233 (1%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
                L   +  ++ +L  LL       +     RL++A+R+  L GGK++R FLV E A
Sbjct: 8   AFEMALIRRAAAVEVLLRRLLDDRPLTGEIARPGRLMAAMRHGVLNGGKRLRPFLVMESA 67

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +LF+ +   ALRV AA+EC+HCYSLIHDDLP+MD+  +RRG+PTVH  +DE TAI+AG+ 
Sbjct: 68  ALFSADGEAALRVAAALECVHCYSLIHDDLPAMDDDDMRRGQPTVHRAFDEATAILAGDA 127

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMI 180
           LLT AF+II+   T L    R+ L+L+L    G  GM+GGQ LD++ E    DE  +  +
Sbjct: 128 LLTLAFDIIAGEATVLPAERRAALVLALARAAGAGGMVGGQTLDLEAERTPPDEAGIIRL 187

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           Q MKTGAL+ FACE+GAI+A A   ++ERL  FG  +G+ FQLADDLLD   D
Sbjct: 188 QAMKTGALIRFACEAGAIIAGAPAEDRERLAEFGSAVGLAFQLADDLLDLTAD 240


>gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205]
 gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205]
          Length = 303

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           L++  +RI     DLL   A+       + L +A+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTALAAF---SLPEPLKAAVHHAVMLGGKRVRPALCYAAASLQAN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  QNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           AFEI+ S           + ++L            M+ GQ+LD+Q E   + + ++  I 
Sbjct: 126 AFEILGSRLFDDQAQGTDAAIVLKQMQILATASSKMVCGQVLDLQAEGKHVAQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR FG+++G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIYSGTDQAIPKLRQFGQSIGLAFQVQDDILDITA 237


>gi|15599765|ref|NP_253259.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1]
 gi|107099768|ref|ZP_01363686.1| hypothetical protein PaerPA_01000786 [Pseudomonas aeruginosa PACS2]
 gi|116052711|ref|YP_793028.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893664|ref|YP_002442533.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58]
 gi|254238683|ref|ZP_04932006.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719]
 gi|254244534|ref|ZP_04937856.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192]
 gi|296391383|ref|ZP_06880858.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAb1]
 gi|313107214|ref|ZP_07793413.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016]
 gi|9950815|gb|AAG07957.1|AE004870_8 octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PAO1]
 gi|115587932|gb|ABJ13947.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126170614|gb|EAZ56125.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa C3719]
 gi|126197912|gb|EAZ61975.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa 2192]
 gi|218773892|emb|CAW29706.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa LESB58]
 gi|310879915|gb|EFQ38509.1| octylprenyl diphosphate synthase [Pseudomonas aeruginosa 39016]
          Length = 322

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E+   +D I+   L      ++    D ++SA      GGK++R  LV          
Sbjct: 10  VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + A IE +H  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L   +F
Sbjct: 63  GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++    +     +    ++S    +  +G +  Q+  ++D    E     + + KT  L
Sbjct: 121 EMMVELGS-----MPVMRIISQATRVIAEGEVL-QLSKVRDASTTEETYMEVIRGKTAML 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              +  S A +  A + + E LR FG+ LGI FQL DDLLD   D  
Sbjct: 175 FEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAA 221


>gi|153007864|ref|YP_001369079.1| polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151559752|gb|ABS13250.1| Polyprenyl synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 356

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 75  GGKRLRPMMTLAAARMFGYEGDGHVRLATAVEFMHTATLLHDDV--VDESDLRRGKSTAR 132

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF+++    +     + +  +L+ + ++  +G +  Q+   +
Sbjct: 133 MIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASVIAEGEVM-QLAAAK 186

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 187 NMETTEDEYLAVIKAKTAALFSAAGEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 246

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 247 DYGGSAADLGK 257


>gi|312864464|ref|ZP_07724695.1| geranyltranstransferase [Streptococcus downei F0415]
 gi|311099591|gb|EFQ57804.1| geranyltranstransferase [Streptococcus downei F0415]
          Length = 288

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 86/232 (37%), Positives = 126/232 (54%), Gaps = 15/232 (6%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++ID  L +       + Q+Q + RL+ AI Y++  GGK+IR  L+ E    F +   
Sbjct: 3   KLEKIDAALKEF------YEQSQVSPRLMEAILYSVHAGGKRIRPLLLLETLEGFGIELT 56

Query: 71  TA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            A  +V AA+E IH  SLIHDDLP+MD+   RRG+ T H Q+DE TAI+AG+ L    + 
Sbjct: 57  KAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKQFDEATAILAGDSLFLDPYG 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGA 187
           +I+   T L  +I   L+  L+   G  GM+ GQMLDI+ E   +   QV+ I   KTG 
Sbjct: 117 LIAQ--TDLHPSIALALIADLSQASGSFGMVAGQMLDIEGEEQTLTLDQVYTIHSHKTGK 174

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           L+ F  ++  ++A        +L   G  +G  FQ+ DD+LD     E+L K
Sbjct: 175 LLAFPFKAAGLLAQQDSAILAQLEEVGLLVGTAFQVRDDILDVTASFEELGK 226


>gi|115526409|ref|YP_783320.1| farnesyltranstransferase [Rhodopseudomonas palustris BisA53]
 gi|115520356|gb|ABJ08340.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisA53]
          Length = 341

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
             L   +  + KR++  +   L +T S   M  +  + L+S+      GGK++R  L   
Sbjct: 21  DQLVELVAADMKRVNATI---LSRTGSEVTMIPEVANHLISS------GGKRLRPMLTLA 71

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  + +    +++ G
Sbjct: 72  MANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVG 129

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL  AF ++    +     +R+  +LS       +G +  Q+   ++    E +   +
Sbjct: 130 DFLLGQAFRMMVEVGS-----LRALDILSAASATIAEGEVM-QLAAAKNTATTEDEYLAV 183

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KT  L   ACE G  +A   + E+   R FG N+GI FQL DD+LD      K
Sbjct: 184 IRGKTAELFAAACEVGPAIAERPKPEQSACRSFGMNIGIAFQLVDDVLDYGGKAAK 239


>gi|167856324|ref|ZP_02479054.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755]
 gi|167852554|gb|EDS23838.1| octaprenyl-diphosphate synthase [Haemophilus parasuis 29755]
          Length = 327

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++S ++     +    ++S   N+  +G +  Q++++ 
Sbjct: 105 ARFGNAASVLVGDFIYTRAFQMMASLRS-----LDVLQVMSDATNVIAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI++ A Q     +R +G  LG  FQL DD+L
Sbjct: 159 DPETTEANYMQVIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|322385057|ref|ZP_08058707.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100]
 gi|321270967|gb|EFX53877.1| geranyltranstransferase [Streptococcus cristatus ATCC 51100]
          Length = 291

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 6/213 (2%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIEC 81
           L     +   + +  L   I Y++  GGK+IR  L+ E    F +    A  +V AA+E 
Sbjct: 12  LTIQEFYQSKEVSADLTETILYSVEAGGKRIRPLLLLELLEGFGLELTPAHFQVAAALEM 71

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L    + +++    +L   
Sbjct: 72  IHTGSLIHDDLPAMDNDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLVAM--VELPSQ 129

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM 199
           ++  L+  L+   G  GM+ GQ+LD+Q E   +   Q+  I   KTG L+ +   +  I+
Sbjct: 130 VKVDLIAELSLAAGSFGMVAGQVLDMQGEGRKLTMDQLQTIHANKTGKLLAYPFVAAGII 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A  SQ+   +LR  GE LG+ FQ+ DD+LD   
Sbjct: 190 AQTSQSVLGKLRQAGELLGLAFQVRDDILDVTA 222


>gi|163734437|ref|ZP_02141877.1| geranyltranstransferase [Roseobacter litoralis Och 149]
 gi|161392445|gb|EDQ16774.1| geranyltranstransferase [Roseobacter litoralis Och 149]
          Length = 289

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 84/236 (35%), Positives = 133/236 (56%), Gaps = 14/236 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              +L+     +    D +L +            ++ A+ +A  GGK++R FLV E A L
Sbjct: 2   FSQRLEAAGAAVQAHFDKVLAEFE-------PLPIVEAMAHATSGGKRLRGFLVLETARL 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            ++    A+    AIE +H YSL+HDDLP MD+  +RRG+PTVH ++D+ TA++AG+ L 
Sbjct: 55  HDIAAGEAIWSATAIEALHAYSLVHDDLPCMDDDDMRRGQPTVHKKWDDATAVLAGDALQ 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           T AFE+++ P       +R+ L LSL    G QGM+ GQ LDI  E     +   ++  +
Sbjct: 115 TLAFELVTHPGASPSAEVRADLALSLARASGAQGMVLGQALDIAAETAHTPLSLDEITRL 174

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           Q+ KTGAL+ ++ ++GA +A A       L+ + + LG+ FQ+ADD+LD   D  +
Sbjct: 175 QQGKTGALIGWSAQAGARLAQAD---TAALKRYAQALGLAFQIADDILDVTGDSAQ 227


>gi|296284709|ref|ZP_06862707.1| geranylgeranyl pyrophosphate synthase [Citromicrobium bathyomarinum
           JL354]
          Length = 340

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   N     ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 59  GGKRLRPMLTLAGAELVGYNGTRHHKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAAN 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +     ++ G+ L + AFE+++   +     ++   +LS    I  +G +  Q+   +
Sbjct: 117 IIFGNPATVLVGDFLFSRAFELMTEDGS-----LKVLKILSSASAIIAEGEVA-QLTSQR 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E +   I   KT AL   A    A++A  S  E++ L  +G NLGI FQL DD L
Sbjct: 171 KITTSEQRYLDIIGSKTAALFAAASRIAAVVAECSDAEEQALDDYGRNLGIAFQLVDDAL 230

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 231 DYSSDAA 237


>gi|167627921|ref|YP_001678421.1| polyprenyl synthetase family protein [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167597922|gb|ABZ87920.1| polyprenyl synthetase family protein [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 325

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 14/194 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +   N      L   A IE IH  +L+HDD+  +D+ ++RRGK T +
Sbjct: 44  GGKRLRPLLVMLFSRALNYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        DN++   +L+   N   +G +  Q+L+ +
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVGL-----DNMQIMQILADATNKISEGEVL-QLLNAR 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLAD 225
           +  + E     +   KT  L   ACE   +++   Q     +  ++ +G  LG  FQ+AD
Sbjct: 156 NIELSEEDYTNVIYCKTAKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIAD 215

Query: 226 DLLDCEED---LPK 236
           D+LD   D   L K
Sbjct: 216 DVLDYVSDAESLGK 229


>gi|320326220|gb|EFW82274.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330645|gb|EFW86622.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330881372|gb|EGH15521.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330891602|gb|EGH24263.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 322

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|241668473|ref|ZP_04756051.1| polyprenyl synthetase family protein [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877007|ref|ZP_05249717.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843028|gb|EET21442.1| octaprenyl-diphosphate synthase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 325

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 14/194 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +   N      L   A IE IH  +L+HDD+  +D+ ++RRGK T +
Sbjct: 44  GGKRLRPLLVMLFSRALNYTGNDHLACAAIIEFIHTATLLHDDV--VDDSHLRRGKETAN 101

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        DN++   +L+   N   +G +  Q+L+ +
Sbjct: 102 NVFGNAASVLTGDFLYSRAFQMMVGL-----DNMKIMQILADATNKISEGEVL-QLLNAR 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ---NEKERLRCFGENLGIIFQLAD 225
           +  + E     +   KT  L   ACE   +++   Q     +  ++ +G  LG  FQ+AD
Sbjct: 156 NIELSEEDYTNVIYCKTAKLFEAACELAGVISLDKQSYSKLQNSIKNYGVYLGNAFQIAD 215

Query: 226 DLLDCEED---LPK 236
           D+LD   D   L K
Sbjct: 216 DVLDYVSDAESLGK 229


>gi|205373837|ref|ZP_03226639.1| heptaprenyl diphosphate synthase subunit HepT [Bacillus
           coahuilensis m4-4]
          Length = 320

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 18/222 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +++ +      +  +  L  A  + L  GGK+IR   V         N      V  ++E
Sbjct: 15  NIIEEELQQAISSSSQTLNEASLHLLQAGGKRIRPVFVLLGGKFGEYNIDVVKNVAVSLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+ DD+  +D+  IRRG PTV  Q+D   A+  G+ +   + + + +       
Sbjct: 75  LIHMASLVLDDV--IDDAEIRRGIPTVKSQWDNKVAMYTGDYIFARSLDYMLNIPNPEAH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGA 197
            I S  ++          +  G++  I+D+++            K KT  L+  +C+ GA
Sbjct: 133 KILSDAIVE---------VCKGEIAQIKDKYLFEQSLRDYLRRIKRKTALLIAVSCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I++ A +   ERL  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 184 IVSGAPREVHERLYRFGYYVGMSFQIIDDILDFTATADELGK 225


>gi|222054630|ref|YP_002536992.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
 gi|221563919|gb|ACM19891.1| Polyprenyl synthetase [Geobacter sp. FRC-32]
          Length = 322

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 13/232 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++     I   L ++ LQ    + +     +     Y L  GGK+IR  L+   A L   
Sbjct: 1   MEAALALIGEDLTNVELQFKKDLHSDVP-LIRKVGEYVLASGGKRIRPALLLLSAKLCGY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                + + + IE IH  +L+HDD+  +DN  +RRG  + +  +    +++ G+ L + +
Sbjct: 60  TGNRNVALASVIEFIHTATLLHDDV--VDNANLRRGIASANTLWGNEASVLVGDFLFSKS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++ +       +++   +LS    I  +G +  Q++   D  +   +   + K KT  
Sbjct: 118 FSLMVADG-----DLKILKVLSGATTIIAEGEVL-QLICTSDLDLTLERYIEVVKAKTAI 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           L+  AC+SGAI+  AS   +  L+ FG +LGI FQL DD LD    EE   K
Sbjct: 172 LLSAACQSGAILGQASSQHETALQEFGMDLGIAFQLMDDTLDYVASEEQFGK 223


>gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
          Length = 303

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQPN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKQITQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITS 237


>gi|226312054|ref|YP_002771948.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis
           NBRC 100599]
 gi|226095002|dbj|BAH43444.1| heptaprenyl diphosphate synthase component II [Brevibacillus brevis
           NBRC 100599]
          Length = 321

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 15/225 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           K++++ + I+  L+         + T   +  LS+      GGK+IR   V       N 
Sbjct: 9   KMKKDVQYIEDELE-------KAIDTPVRELYLSSTHLLKAGGKRIRPVFVLLGGKWGNY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      V   +E IH  SL+HDD+  +D+   RRGK TV +++D   A+ AG+ +   A
Sbjct: 62  DVKKLKHVAVPLELIHMASLVHDDV--IDDADKRRGKDTVRMKWDNKVAMYAGDYIFARA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             I S         I S  ++ +            Q+ D+ +   +        K KT  
Sbjct: 120 LAIASQLPIPQLHQILSNAIVEVCKGEI------QQVKDLNNWDQNFRTYLRRIKRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C+ GA+ + AS +   ++  +G N+G+ FQ+ DD+LD   
Sbjct: 174 LIAISCQLGAVASGASADMIRKMYWYGYNVGMAFQITDDILDFTG 218


>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 358

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 78/249 (31%), Positives = 128/249 (51%), Gaps = 21/249 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               + + E +  ++  LD      A+    +    L  A+RYALL GGK++R  L    
Sbjct: 56  FDFKAYMGERAVAVNGALD------AAVPAGEPPATLHEAMRYALLAGGKRVRPALCLAA 109

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +       A+   AA+E +H  SL+HDDLP MD+  +RRGKPT H+ + E  A++AG+
Sbjct: 110 CVVSGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGD 169

Query: 122 GLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            LL  AF+ ++S  +   D           + +  L   IG +G++ GQ++D++     E
Sbjct: 170 ALLALAFQHMASVDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTE 229

Query: 175 ----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                ++  I   KT AL+  +   GAI+   S+ + ERLR +  ++G++FQ+ DD+LD 
Sbjct: 230 PVPLDRLEYIHLHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDV 289

Query: 231 E---EDLPK 236
               E+L K
Sbjct: 290 TKSSEELGK 298


>gi|262371901|ref|ZP_06065180.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii
           SH205]
 gi|262311926|gb|EEY93011.1| heptaprenyl diphosphate synthase component II [Acinetobacter junii
           SH205]
          Length = 325

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 10/189 (5%)

Query: 48  LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A     VN   A  + A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAAKACGLVNMQQAQHLAAIIEMLHTATLVHDDV--VDESNLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  +F+++        +NI      S       +G +      
Sbjct: 103 ANATWNNQTAVLVGDFLIARSFDLLVDL-----NNITLLKDFSTGTCEIAEGEVLQLQSQ 157

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            Q E   E     I   KT  L   A E  AI+A  ++  +E LR F  + G  FQ+ DD
Sbjct: 158 HQPE-TTEETYLRIIHGKTSRLFELATEGAAILAG-TEEYREPLRRFAGHFGNAFQIIDD 215

Query: 227 LLDCEEDLP 235
           +LD   D  
Sbjct: 216 ILDYTSDAE 224


>gi|325661672|ref|ZP_08150295.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471925|gb|EGC75140.1| hypothetical protein HMPREF0490_01030 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 296

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 12/237 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN     + ++ ++ I+ IL   L       Q      ++ A+ Y+L+ GGK++R  L+ 
Sbjct: 1   MN--FRDEKRKKTEEIEQILKAYLPVQEGKQQV-----IMEAMEYSLMAGGKRLRPMLLW 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +F     T     AAIE IH YSL+HDDLP+MD+   RRG+ T HI Y E   I+A
Sbjct: 54  ETFQMFGGAAKTVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           G+ LL YAFE   +   +  +      + +  L    G+ GM+GGQ++D+    + I E 
Sbjct: 114 GDALLNYAFETACTAFEEAPEEAIRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITED 173

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  I ++KTGAL+  A   GAI+A A + E   +    + +GI FQ+ DD+LD   
Sbjct: 174 ILSFIYELKTGALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDVTS 230


>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 303

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQPN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKKITQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITS 237


>gi|313200295|ref|YP_004038953.1| trans-hexaprenyltranstransferase [Methylovorus sp. MP688]
 gi|312439611|gb|ADQ83717.1| Trans-hexaprenyltranstransferase [Methylovorus sp. MP688]
          Length = 309

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A  F   +     + A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 30  GGKRLRPALVLLSAGAFGEVNARHHELAAVVEFIHTATLLHDDV--VDESAMRRGRATAN 87

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + + AF+++        +++R   +L+   NI  +G +  Q+L++ 
Sbjct: 88  TLFGNAASVLVGDFIYSRAFQMMVG-----VESMRVMEVLAEATNIIAEGEVL-QLLNVH 141

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I +     +   KT  L   A   GAI+  AS+ +++ +  +G  LG  FQL DD+L
Sbjct: 142 DADITDEAYLKVIHYKTAKLFEAATRLGAIICSASEQDEQAMAEYGMRLGTAFQLIDDVL 201

Query: 229 DCEED 233
           D   D
Sbjct: 202 DFSGD 206


>gi|319897631|ref|YP_004135828.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031]
 gi|317433137|emb|CBY81511.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3031]
          Length = 329

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQNYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|315931387|gb|EFV10356.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 327]
          Length = 281

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 35  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 95  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNTGLNGMVIGQAID 152

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 213 DDIIDVT 219


>gi|160947156|ref|ZP_02094323.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270]
 gi|158446290|gb|EDP23285.1| hypothetical protein PEPMIC_01088 [Parvimonas micra ATCC 33270]
          Length = 282

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 7/224 (3%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D  +++T  +     N+       Y+  +GGK+IR+ L+ E   +       A+    A+
Sbjct: 11  DKSIIETRLNKVYADNNEFEKMCAYSFSVGGKRIRAILLLEAFKICRDISDIAIDFSVAL 70

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH YSL+HDDLP MD+   RRG  +V+ +Y +  A++ G+ LL  A  I+     QL+
Sbjct: 71  ELIHNYSLVHDDLPEMDDDKFRRGVLSVYGKYGQSNAVLVGDELLNNANLIMFKAIKQLE 130

Query: 140 DNIRSQLMLSLTH----NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           +    +  +S +     + G+ GM+ GQ LD+++   + + +  I  +KTG L   A  +
Sbjct: 131 NIDEIKNAISASEIILNSSGINGMVYGQFLDLENNVENLSDIEKINSLKTGELFKAAILA 190

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           GA +  AS N+   L  + +NLG++FQL DDL D +ED+   KK
Sbjct: 191 GAKLGGASDNDLAHLEIYAKNLGLVFQLQDDLFDYDEDVELNKK 234


>gi|148993815|ref|ZP_01823217.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae
           SP9-BS68]
 gi|168489033|ref|ZP_02713232.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae SP195]
 gi|147927640|gb|EDK78665.1| hypothetical protein CGSSp9BS68_05466 [Streptococcus pneumoniae
           SP9-BS68]
 gi|183572405|gb|EDT92933.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae SP195]
 gi|332073546|gb|EGI84025.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA17570]
          Length = 291

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    ++++L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESVLEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ SL+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIASLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|299066176|emb|CBJ37360.1| geranyltranstransferase (=farnesyldiphosphate synthase) [Ralstonia
           solanacearum CMR15]
          Length = 299

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
                 +     R ++ L+  L       +     RL +A+RYA LG GK++R  L    
Sbjct: 2   SDFAHWMASVVARTESALERALP-----GELVAPQRLHAAMRYATLGAGKRVRPLLAHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
            +L   +      V  A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GALGEASPEALDGVSCAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHRAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            L T AF  ++     +    R+ L+  L    G  GM GGQ +D+Q     + +  +  
Sbjct: 117 ALQTQAFIALAELGA-VSPATRAGLVGELARASGSLGMAGGQAIDLQSVGVALSQDALET 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+ A  +    E++  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASLRMGALCAGVNAAALEQVDAYAGAVGLAFQVVDDILDVTADTA 231


>gi|283850298|ref|ZP_06367587.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B]
 gi|283574324|gb|EFC22295.1| Polyprenyl synthetase [Desulfovibrio sp. FW1012B]
          Length = 299

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 81/235 (34%), Positives = 123/235 (52%), Gaps = 6/235 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +  +L   +  ++  L +     A   +    + LL+A+ Y+LL GGK++R  L    A 
Sbjct: 3   VKERLAAQAAEVEVYLKERF--GARMRERGVPESLLAAMEYSLLAGGKRLRPALCLSFAE 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF      A+   A  E IH YSLIHDDLP+MD+  +RRG+P+ H  + E  AI+AG+GL
Sbjct: 61  LFGAARARAMPFAAGFEIIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAAAILAGDGL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMI 180
           LT AF  +      +  ++    +       G  GM GGQ LD+     + +   ++  +
Sbjct: 121 LTEAFGCMGRAWPGIAADLVLPALAEAARAAGAAGMGGGQALDMDYTARQGVTLAELARM 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q +KTGAL+  +C  GAI+A A +    R R +GE +G  FQ+ DD+LD   D  
Sbjct: 181 QALKTGALITASCVCGAILAGAGEEGVARAREYGEAVGAAFQIVDDILDEIGDAA 235


>gi|260101429|ref|ZP_05751666.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM
           20075]
 gi|260084769|gb|EEW68889.1| geranylgeranyl diphosphate synthase [Lactobacillus helveticus DSM
           20075]
 gi|328465627|gb|EGF36850.1| Geranyltranstransferase [Lactobacillus helveticus MTCC 5463]
          Length = 289

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 17/222 (7%)

Query: 19  ILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRV 75
           ++DD L   A H+ ++  N ++   + Y+++ GGK++R  L     +          +R+
Sbjct: 14  VIDDYL---AKHLASEVDNQKISQIMAYSVMAGGKRLRPLLFLATLNTLGRKIDEPEIRI 70

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE IH YSLIHDDLP+MDN   RRGK T H ++ E  AI+AG+ LL    + I+   
Sbjct: 71  VCGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGIQWIAEGS 130

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMC 190
                   +QL+  +T  +G  GM+GGQ LDI          D   +  ++ +KTG L+ 
Sbjct: 131 QS------AQLVNIITQAVGPNGMVGGQYLDIDSTNNASVAGDAKFINQMEWLKTGCLIQ 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + E  A+ A AS  E+ +L  F +  G  +Q+ DDL+D  E
Sbjct: 185 ASVEMAAVYAKASDIEQVKLIDFAKAFGRSYQIYDDLVDVVE 226


>gi|119472626|ref|ZP_01614617.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7]
 gi|119444830|gb|EAW26131.1| Octaprenyl-diphosphate synthase [Alteromonadales bacterium TW-7]
          Length = 323

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 12/227 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFN 66
           ++     I++ ++D+      H Q +    L++ +  Y +  GGK++R  L    A    
Sbjct: 3   IKAIQALIESDMNDV--NQLIHAQMRSEVALVNQLGLYIVNSGGKRVRPMLAILAAKALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + +   +E IH  +L+HDD+  +D   +RRG PT + ++    +++ G+ + T 
Sbjct: 61  YTGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F+++          ++   +L+   NI  +G +  Q+++  D    E     +   KT 
Sbjct: 119 SFQLMVGLG-----KMQIMQILADATNIIAEGEVL-QLMNCNDPDTTEASYMQVIYSKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A    AI+ +  +     L  +G +LG  FQL DD+LD   D
Sbjct: 173 KLFEAATGLAAIITNNDEATLNALNLYGMHLGTAFQLVDDVLDYNAD 219


>gi|307150008|ref|YP_003885392.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822]
 gi|306980236|gb|ADN12117.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7822]
          Length = 323

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           +D  L  LL +    +    +  L +A  +    GGK+IR  LV   +    ++      
Sbjct: 11  VDKDL-RLLSENLKKLVGARHPILAAAAEHLFDAGGKRIRPALVLLVSRATMLDQDITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S+++               Q +++ D  I           KT +LM  
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEI------QQGINLFDTGITLEAYLEKSYYKTASLMAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++ A+++   +   E L  +G  LG+ FQ+ DD+LD   
Sbjct: 182 SAKAAAVLSDVPREVTEHLYNYGRYLGLAFQIVDDILDFTS 222


>gi|148559082|ref|YP_001258425.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840]
 gi|148370339|gb|ABQ60318.1| polyprenyl synthetase family protein [Brucella ovis ATCC 25840]
          Length = 328

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 47  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 105 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 159 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 218

Query: 229 DCEE---DLPK 236
           D      DL K
Sbjct: 219 DYGGSATDLGK 229


>gi|49473966|ref|YP_032008.1| octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse]
 gi|49239469|emb|CAF25820.1| Octaprenyl-diphosphate synthase [Bartonella quintana str. Toulouse]
          Length = 356

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           +++ +R++  +  +  ++   M  + ++ L+S+      GGK++R  +    A +F+  +
Sbjct: 43  KDDMERVNKFILSM-AKSDIEMIPEISNHLISS------GGKRLRPMITLASAHMFDYQN 95

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++  A+E +H  +L+HDD+  +D   +RRGK T  + +    +I+ G+ LL  AF+
Sbjct: 96  DGHIKLATAVEFMHTATLLHDDV--IDESNLRRGKSTARMIWGNQASILVGDFLLGQAFK 153

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++    +     I +  +L+    I  +G +  Q+  +++     +    I   KT AL 
Sbjct: 154 LMVDVGS-----IEALSVLANAAAIIAEGEVM-QLSAVKNIETSTSDYLKIINAKTAALF 207

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A E G I+A     E+  LR +G  LG+ FQL DD+LD   
Sbjct: 208 SAAAEVGPIIAGYKYKERFALREYGTLLGLAFQLIDDVLDYGG 250


>gi|301064156|ref|ZP_07204603.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium
           NaphS2]
 gi|300441776|gb|EFK06094.1| putative octaprenyl pyrophosphate synthetase [delta proteobacterium
           NaphS2]
          Length = 325

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 25/238 (10%)

Query: 1   MNGGLP--SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFL 57
           M G +P  +  + + +RI+  L+ +        +            YALLG GK++R  +
Sbjct: 1   MTGEIPTLALFEAHFERINRELNKVFDSRVPLAKEIGT--------YALLGEGKRLRPLI 52

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                 L          +    E IH  SL+HDD+  +DN  IRR KP+ +  +    A+
Sbjct: 53  FVLSCQLCGYGGEDLYPLSTVFEYIHTSSLLHDDV--LDNAEIRRRKPSSNQIWGNQAAV 110

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDE 174
           + G+ L + A  I  S  +          + SLT       M  GQ+L+     D     
Sbjct: 111 LEGDFLFSKALSIAVSANS-------VPFISSLTKA--TMRMSEGQILELVHTDDLETGR 161

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                I   KT  L+  AC  GAI++ +S   +  L  FG ++GI FQL DDLLD   
Sbjct: 162 DTYMQIINAKTAVLISAACGCGAIVSGSSPEIEASLTRFGRSVGIAFQLVDDLLDYTS 219


>gi|299142039|ref|ZP_07035173.1| octylprenyl diphosphate synthase [Prevotella oris C735]
 gi|298576501|gb|EFI48373.1| octylprenyl diphosphate synthase [Prevotella oris C735]
          Length = 325

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 12/226 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
            L    + I   L+D +      +   H++ LLS +   +   GGK++R  L+   A  F
Sbjct: 3   YLSLIKEPISAELEDFISLFNQSLS--HDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                        +E +H  SL+HDD+  +D    RRG+ +V+  YD   +++ G+ +L+
Sbjct: 61  GRVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +S   +++     S+L  +L+    L      Q+ +IQ+E I ET  + I K KT
Sbjct: 119 TALLYVSKTHSEVIVRYLSELGRTLSDGEIL------QLTNIQNEAITETAYYEIIKRKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            AL       GA  A AS ++ E  R FG+NLGIIFQ+ DD+ D  
Sbjct: 173 AALFEACAAIGAESAGASHDDVEAARKFGQNLGIIFQIRDDIFDYY 218


>gi|27228290|gb|AAN85596.1| Geranylgeranyl Pyrophosphate Synthase [Pantoea stewartii]
          Length = 303

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 78/232 (33%), Positives = 119/232 (51%), Gaps = 12/232 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
           ++    ID+ LD LL            D + +A+R   L  GK+IR  L+   A      
Sbjct: 17  EQLLADIDSRLDQLLPVQGER------DCVGAAMREGTLAPGKRIRPMLLLLTARDLGCA 70

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++H   L +  A+E +H  SLI DD+P MD+  +RRG+PT+H QY E  AI+A   LL+ 
Sbjct: 71  ISHGGLLDLACAVEMVHAASLILDDMPCMDDAQMRRGRPTIHTQYGEHVAILAAVALLSK 130

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
           AF +I+  +  L    +++ +  L+  IG+QG++ GQ  D    D+      + +  + K
Sbjct: 131 AFGVIAEAE-GLTPIAKTRAVSELSTAIGMQGLVQGQFKDLSEGDKPRSADAILLTNQFK 189

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T  L C + +  +I A+AS   +E L  F  +LG  FQL DDL D   D  K
Sbjct: 190 TSTLFCASTQMASIAANASCEARENLHRFSLDLGQAFQLLDDLTDGMTDTGK 241


>gi|289547882|ref|YP_003472870.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
 gi|289181499|gb|ADC88743.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
          Length = 264

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 15/225 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           KL    ++++  L  +L  +   +       L  A+ Y  L GGK+IR  L+        
Sbjct: 3   KLSLWKEKVEVKLRQILAPSEPLL-------LYEAMSYYPLQGGKRIRPLLLCGVCDALG 55

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A+ VG AIE IH YSLIHDDLP++DN   RRG P+ HI + E  A++AG+ LLT 
Sbjct: 56  GNVEDAVVVGCAIELIHNYSLIHDDLPALDNDPQRRGLPSCHIAFGEDIALLAGDALLTL 115

Query: 127 AFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           AF+++S      Q++ +    ++  ++   G +GM+GGQ++DI+           I   K
Sbjct: 116 AFQVLSDVSQFNQVEPSDLLLIIHEISRRAGSEGMVGGQVMDIRGIGDRRE----INLKK 171

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T  L      S  I+A   ++  + L   G   G++FQ+ DD  D
Sbjct: 172 TAQLFAACFVSAGIIAK-KKSMLKDLEKVGIRTGLLFQMCDDWKD 215


>gi|242373777|ref|ZP_04819351.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348514|gb|EES40116.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
           M23864:W1]
          Length = 332

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 25/229 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH--L 70
           K+++  L         H     +  L  A  + L  GGK++R   V   +   +      
Sbjct: 24  KKVEDRL--------QHAIKSSDQTLEDAAFHLLSSGGKRVRPVFVILSSQFGDSKDTSE 75

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
              RV  A+E IH  +L+HDD+  +D    RRG+PT+  ++D+ TAI+ GN LL    + 
Sbjct: 76  NTYRVAVALELIHMATLVHDDV--IDKSDKRRGRPTISKKWDQTTAILTGNFLLALGLQH 133

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGA 187
           +S  K     NI S+ ++          +  G++   QD+F  +   T        KT  
Sbjct: 134 LSEIKDSRVHNIISKSIVD---------VCKGELFQFQDQFNSDQNITNYLRRINRKTAL 184

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  A E GA+ ++AS     +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 185 LIQLATEVGALTSNASDEVVRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 233


>gi|296116309|ref|ZP_06834925.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977128|gb|EFG83890.1| Polyprenyl synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 12/237 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M  G    L++ ++ +   +          M +        A      GGK++R  L   
Sbjct: 1   MADGSEVALRDLAEYLADDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLA 60

Query: 61  CASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            A L            + + A +E IH  +L+HDD+  +D   +RRG  + +  +    +
Sbjct: 61  SARLCGYEPDATHQRHVALAACVEFIHTATLLHDDV--VDESTLRRGLASANAIFGNKAS 118

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L   +F++++   +     ++   +LS       +G +  QM    D      +
Sbjct: 119 VLVGDFLFARSFQLMTDDGS-----LKVMNILSSASATIAEGEVL-QMSTQNDLSTSIEK 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +   KT AL   AC  GA++A      +E L  +G NLG+ FQL DD LD   D
Sbjct: 173 YLEVIHGKTAALFAAACRVGAVVADQPLKVEEALDSYGTNLGMAFQLVDDALDYAAD 229


>gi|291570889|dbj|BAI93161.1| solanesyl diphosphate synthase [Arthrospira platensis NIES-39]
          Length = 323

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  LL      +    +  L +A  +   + GK++R  +V   +     +H     
Sbjct: 11  VEADLK-LLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEIIPK 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  ++   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + SQ+++ L            Q L+  D  +           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSQVIMDLAEGEI------QQGLNRFDTSLSIEAYLEKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  S    E L  +G N+G+ FQ+ DD+LD   
Sbjct: 182 SSKAAGLLSGVSAELAEDLYKYGRNIGLAFQIVDDILDFTG 222


>gi|152985492|ref|YP_001350541.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7]
 gi|150960650|gb|ABR82675.1| octaprenyl-diphosphate synthase [Pseudomonas aeruginosa PA7]
          Length = 322

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E+   +D I+   L      ++    D ++SA      GGK++R  LV          
Sbjct: 10  VAEDFTAVDGIIRRQLTSRVPLVEKIG-DYIISA------GGKRLRPLLVLLAGKTLGYK 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + A IE +H  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L   +F
Sbjct: 63  GDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++    +     +    ++S    +  +G +  Q+  ++D    E     + + KT  L
Sbjct: 121 EMMVELGS-----MPVMRIISQATRVIAEGEVL-QLSKVRDASTTEETYMEVIRGKTAML 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              +  S A +  A + + E LR FG+ LGI FQL DDLLD   D  
Sbjct: 175 FEASTHSAAALCRAGEEQAEALRRFGDYLGIAFQLVDDLLDYRGDAA 221


>gi|71066490|ref|YP_265217.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4]
 gi|71039475|gb|AAZ19783.1| farnesyl-diphosphate synthase [Psychrobacter arcticus 273-4]
          Length = 335

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 25/224 (11%)

Query: 33  TQHNDRLLSAIRYALLG-GKKIRSFLVTEC------------------ASLF--NVNHLT 71
            +    LL A RY + G GK +R  LV                     A+L   + ++  
Sbjct: 42  AELPSPLLDACRYVMTGTGKLVRPLLVASAFASTYSHNDTIADKDNALATLLENDSDYDM 101

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           + R   A+E +H YSL+HDDLP MD+  +RRG+PT HI + E TA++AG+ L T AFE++
Sbjct: 102 SRRAALAVELLHTYSLVHDDLPCMDDDELRRGQPTAHIVFAEATALLAGDVLQTLAFEVL 161

Query: 132 -SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGA 187
            +   T    +      L        + M+ GQMLD+  E    I ++ +  I + KTGA
Sbjct: 162 TAEMPTFAPFDSDIASQLFAIFAPRARRMVSGQMLDLNAEATTGISQSDLEAIHRDKTGA 221

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           L+  A   G I A A+  ++  L+   +++G+ FQ+ DD+LD  
Sbjct: 222 LIEAAMLMGGICAGATATQRMALQECAQHIGLAFQVQDDILDVT 265


>gi|304314300|ref|YP_003849447.1| geranyl pyrophosphate synthase [Methanothermobacter marburgensis
           str. Marburg]
 gi|2497458|sp|Q53479|IDSA_METTM RecName: Full=Bifunctional short chain isoprenyl diphosphate
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyl pyrophosphate synthase; Short=FPP
           synthase; AltName: Full=Geranyltranstransferase
 gi|11279236|pir||T45152 bifunctional short chain isoprenyl diphosphate synthase [imported]
           - Methanobacterium thermoautotrophicum
 gi|913252|gb|AAB32421.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanothermobacter thermautotrophicus]
 gi|302587759|gb|ADL58134.1| predicted geranyl pyrophosphate synthase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 325

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 14/233 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           +++ +  ++   + D  +++  S +     D LL A  + +  GGKKIR  L        
Sbjct: 2   TEVLDILRKYSEVADKRIMECISDI---TPDTLLKASEHLITAGGKKIRPSLALLSCEAV 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             N   A  V AAIE IH +SLIHDD+  MD+  +RRG+P+VH+ + E  AI+AG+ L +
Sbjct: 59  GGNPEDAAGVAAAIELIHTFSLIHDDI--MDDDEMRRGEPSVHVIWGEPMAILAGDVLFS 116

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182
            AFE +        D+ R +  L++  +  ++ +  GQ LD+  E    + E +   +  
Sbjct: 117 KAFEAVIRNG----DSERVKDALAVVVDSCVK-ICEGQALDMGFEERLDVTEDEYMEMIY 171

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT AL+  A ++GAIM  AS+ E E L  +G+ +G+ FQ+ DD LD   D  
Sbjct: 172 KKTAALIAAATKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEE 224


>gi|306842306|ref|ZP_07474966.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. BO2]
 gi|306287563|gb|EFM59019.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. BO2]
          Length = 322

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 41  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 99  TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 153 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 212

Query: 229 DCEE---DLPK 236
           D      DL K
Sbjct: 213 DYSGSAADLGK 223


>gi|85714244|ref|ZP_01045232.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
 gi|85698691|gb|EAQ36560.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
          Length = 336

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L   +    +++ A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMANLAGYSGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSAAATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G ++    + E+     FG NLGI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPVLGGRPKAEETAAASFGMNLGIAFQLVDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKSAK 234


>gi|56417209|ref|YP_154283.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St.
           Maries]
 gi|56388441|gb|AAV87028.1| octaprenyl-diphosphate synthase [Anaplasma marginale str. St.
           Maries]
          Length = 327

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 14/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL-GGKKIRSFL 57
           M+      L +    +   L+DL       + T ++D   +   I + +L GGK+IR  L
Sbjct: 1   MSDAFNRALIDLKSLV---LEDLQAMEQLIVDTSNSDISYIADIISHLMLSGGKRIRPIL 57

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           +     +  +     +R+ AAIE IH  +L+HDD+  +D   +RRG  T +  +    +I
Sbjct: 58  LLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASI 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ LL  AF+ I S       N     +LS      + G +  QM+  ++  I   + 
Sbjct: 116 LVGDFLLAAAFQWIVSCG-----NFELLTVLSGASRTIVAGEI-QQMVYSKNLDITREKY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KT AL    CES  +++ +    +E LR FG N GI FQ+ DDLLD   
Sbjct: 170 IEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224


>gi|281424797|ref|ZP_06255710.1| octylprenyl diphosphate synthase [Prevotella oris F0302]
 gi|281401167|gb|EFB31998.1| octylprenyl diphosphate synthase [Prevotella oris F0302]
          Length = 325

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 12/226 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
            L    + I   L+D +      +   H++ LLS +   +   GGK++R  L+   A  F
Sbjct: 3   YLSLIKEPISAELEDFISLFNQSLS--HDEGLLSQVLVHIRQRGGKRMRPMLILLMAKNF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                        +E +H  SL+HDD+  +D    RRG+ +V+  YD   +++ G+ +L+
Sbjct: 61  GRVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +S   +++     S+L  +L+    L      Q+ +IQ+E I ET  + I K KT
Sbjct: 119 TALLYVSKTHSEVIVRYLSELGRTLSDGEIL------QLTNIQNEAITETAYYEIIKRKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            AL       GA  A AS ++ E  R FG+NLGIIFQ+ DD+ D  
Sbjct: 173 AALFEACAAIGAESAGASHDDVEAARKFGQNLGIIFQIRDDIFDYY 218


>gi|71735497|ref|YP_273004.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556050|gb|AAZ35261.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 322

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|62289388|ref|YP_221181.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|189023639|ref|YP_001934407.1| polyprenyl synthetase [Brucella abortus S19]
 gi|254693184|ref|ZP_05155012.1| hypothetical protein Babob3T_00652 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696828|ref|ZP_05158656.1| hypothetical protein Babob28_03708 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254707866|ref|ZP_05169694.1| hypothetical protein BpinM_13091 [Brucella pinnipedialis
           M163/99/10]
 gi|254709549|ref|ZP_05171360.1| hypothetical protein BpinB_04602 [Brucella pinnipedialis B2/94]
 gi|254713033|ref|ZP_05174844.1| hypothetical protein BcetM6_06634 [Brucella ceti M644/93/1]
 gi|254716613|ref|ZP_05178424.1| hypothetical protein BcetM_09363 [Brucella ceti M13/05/1]
 gi|256031043|ref|ZP_05444657.1| hypothetical protein BpinM2_10374 [Brucella pinnipedialis
           M292/94/1]
 gi|256060537|ref|ZP_05450705.1| hypothetical protein Bneo5_09318 [Brucella neotomae 5K33]
 gi|256254446|ref|ZP_05459982.1| hypothetical protein BcetB_09183 [Brucella ceti B1/94]
 gi|256256948|ref|ZP_05462484.1| hypothetical protein Babob9C_06236 [Brucella abortus bv. 9 str.
           C68]
 gi|260168175|ref|ZP_05754986.1| polyprenyl synthetase family protein [Brucella sp. F5/99]
 gi|306839902|ref|ZP_07472700.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. NF 2653]
 gi|306845036|ref|ZP_07477617.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. BO1]
 gi|62195520|gb|AAX73820.1| polyprenyl synthetase family protein [Brucella abortus bv. 1 str.
           9-941]
 gi|189019211|gb|ACD71933.1| Polyprenyl synthetase [Brucella abortus S19]
 gi|306274668|gb|EFM56457.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. BO1]
 gi|306405088|gb|EFM61369.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella sp. NF 2653]
 gi|326408435|gb|ADZ65500.1| Polyprenyl synthetase [Brucella melitensis M28]
 gi|326538151|gb|ADZ86366.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 338

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 169 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGSAADLGK 239


>gi|283957030|ref|ZP_06374502.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791531|gb|EFC30328.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 281

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 35  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 95  LHKSYDEPTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEENNQIYKLGLKLGLIFQIN 212

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 213 DDIIDVT 219


>gi|148552951|ref|YP_001260533.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1]
 gi|148498141|gb|ABQ66395.1| farnesyl-diphosphate synthase [Sphingomonas wittichii RW1]
          Length = 297

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 103/237 (43%), Positives = 143/237 (60%), Gaps = 9/237 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           M+  L S+L   ++ ID   D LL            +RL +A+R+A + GGK++R  L  
Sbjct: 1   MSALLASELARIAQEIDARFDTLLTP-----PDDSRERLYAAMRHAAIGGGKRLRPLLAC 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A LF V+   ALR G AIE IH YSLIHDDLP+MD+  +RRG+PTVH  YDE TAI+A
Sbjct: 56  ASARLFAVDPECALRAGLAIEAIHVYSLIHDDLPAMDDDDLRRGRPTVHRAYDEATAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQ 176
           G+G    AFEI +S  T     +RS+L+ +L    G  GM+GGQ +D+  E     D   
Sbjct: 116 GDGFQALAFEIAASEATHPDPFVRSELVAALAAAAGPAGMVGGQAMDMAAEAGGEHDLDA 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +Q++KTGAL+ F+ E+GAI+       + +LR +  +LG+ FQ+ADDLLD E D
Sbjct: 176 ISRLQQLKTGALIGFSIEAGAILGRVPPEGRTKLRAYAHDLGLAFQIADDLLDAEGD 232


>gi|291287109|ref|YP_003503925.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884269|gb|ADD67969.1| Trans-hexaprenyltranstransferase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 324

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 15/228 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           ++   + ++  L D L  +   M  +  + +  +      GGK++R   +   A +   +
Sbjct: 10  VENEREAVEKNLIDNL-DSDVEMVNKVAEYIFES------GGKRLRPVFMILSALMCGYD 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +   +E IH  +L+HDD+  +D    RRGK + +  +     ++ G+ L + AF
Sbjct: 63  GERTINLAGVVEYIHTATLLHDDV--IDGAKYRRGKESANNVFGNDITVLCGDFLYSRAF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             +           R+Q++L++      +G +  Q++   D  I       I   KT  +
Sbjct: 121 MNLVKDGDS-----RAQMLLAVAARTMSEGEVF-QLIKTADVKITMDDYLRIINSKTAVM 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               CE GAI+      +++ L  FG+ LGI FQ+ADD+LD   D  K
Sbjct: 175 FATCCEIGAILGEMPVEKQKALADFGKTLGIAFQMADDILDYLGDPEK 222


>gi|145638300|ref|ZP_01793910.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittII]
 gi|145272629|gb|EDK12536.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittII]
          Length = 323

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214

Query: 229 DCEE 232
           D   
Sbjct: 215 DYSA 218


>gi|291619711|ref|YP_003522453.1| CrtE [Pantoea ananatis LMG 20103]
 gi|291154741|gb|ADD79325.1| CrtE [Pantoea ananatis LMG 20103]
          Length = 311

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
           ++    ID  LD LL            D + +A+R  AL  GK+IR  L+   A      
Sbjct: 26  EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 79

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V+H   L +  A+E +H  SLI DD+P MD+  +RRG+PT+H  Y E  AI+A   LL+ 
Sbjct: 80  VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 139

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
           AF +I+     L    +++ +  L++ IG+QG++ GQ  D    D+      + M    K
Sbjct: 140 AFGVIADAD-GLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFK 198

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T  L C + +  +I+A+AS   ++ L  F  +LG  FQL DDL D   D  K
Sbjct: 199 TSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 250


>gi|254490429|ref|ZP_05103615.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010]
 gi|224464173|gb|EEF80436.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010]
          Length = 288

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 78/231 (33%), Positives = 123/231 (53%), Gaps = 10/231 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
           +Q++  +I+  LD  L       +   + RL+ A+RYA L GGK++R+ LV         
Sbjct: 1   MQQHQAQIELALDKRLTAQ----KQPGSQRLVEAMRYATLGGGKRLRALLVYATGEAMGA 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N +      AA+E IH YSL+HDD+P MD+  +RRG+PT H  +DE TA++ G+ L T A
Sbjct: 57  NPVALDAAAAAVEMIHAYSLVHDDMPIMDDDDLRRGRPTCHKAFDEATALLVGDALQTMA 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
           FE +      L    +  ++  L    G  GM GGQ +D++   + +D   +  + K+KT
Sbjct: 117 FETLCD--NSLTAAQQVLMIKRLAQASGAFGMAGGQAVDLESVGKKLDLNALQSMHKLKT 174

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  +   GA+ A        +RL  + + +G+ FQ+ DD+LD   D  
Sbjct: 175 GALIRASVLLGALAASDYDDETLQRLERYADCIGLAFQVQDDVLDVIADTE 225


>gi|16272821|ref|NP_439042.1| octaprenyl-diphosphate synthase [Haemophilus influenzae Rd KW20]
 gi|260579972|ref|ZP_05847802.1| heptaprenyl diphosphate synthase component II [Haemophilus
           influenzae RdAW]
 gi|1170590|sp|P44916|ISPB_HAEIN RecName: Full=Octaprenyl-diphosphate synthase; AltName:
           Full=All-trans-octaprenyl-diphosphate synthase; AltName:
           Full=Octaprenyl pyrophosphate synthase; Short=OPP
           synthase
 gi|1573899|gb|AAC22540.1| octaprenyl-diphosphate synthase (ispB) [Haemophilus influenzae Rd
           KW20]
 gi|260093256|gb|EEW77189.1| heptaprenyl diphosphate synthase component II [Haemophilus
           influenzae RdAW]
 gi|309751451|gb|ADO81435.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2866]
          Length = 329

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|329765834|ref|ZP_08257400.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137677|gb|EGG41947.1| polyprenyl synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 283

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           +I+  LD         +        +  +RY+L GGK+IR  +++  A          L 
Sbjct: 21  KINQALDR-------ELSLYSESEFIEPLRYSLEGGKRIRPIILSLAAESVGKIDDNTLA 73

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E +H  S+IHDD+  +DN  +RR +   HI+Y   T+++ G+ +L     +I + 
Sbjct: 74  ASCAVEFLHMESIIHDDI--IDNETMRRQREPFHIKYGYNTSVLTGDFVLG----LILAI 127

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            ++L +   ++ + +    +    M+  ++     E +       + + KT      A  
Sbjct: 128 SSRLDNARITKDLATTAMLMSEGEMIESRLE--SSEDVTFDDYLKVIEYKTATAFEVAAR 185

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            GAI+A  S+ E E L  +G+N+GI +Q+ DDLLD
Sbjct: 186 IGAIIASGSEEEIEALTEYGKNIGIAYQIRDDLLD 220


>gi|331008742|gb|EGH88798.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 322

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +     ++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  I
Sbjct: 100 NALWGNAPRVLVGDFLYSRSFEMMVELGS-----MEVMRILSKATRIIAEGEVL-QLSKI 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A + +A + + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPEVQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 214 LDYRGDAE 221


>gi|254701208|ref|ZP_05163036.1| hypothetical protein Bsuib55_10162 [Brucella suis bv. 5 str. 513]
          Length = 338

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 169 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGSAADLGK 239


>gi|328466279|gb|EGF37436.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes 1816]
          Length = 312

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L  N 
Sbjct: 1   MQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLAPNA 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +         AIE IH  S++HDD+  +DN  +RRG+ T+  ++    A+  G+ L   +
Sbjct: 55  DFDAVKNASVAIELIHMASIVHDDV--VDNADLRRGRETIKSKWGNHIAMYTGDFLFAKS 112

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++  K     ++ +  MLS        G +  Q+ D  +            K KT  
Sbjct: 113 LEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKRKTAL 166

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 167 LIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 218


>gi|156741272|ref|YP_001431401.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156232600|gb|ABU57383.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 338

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + + ++    + D  +         H+  +  D   +    +   GK +R  L      
Sbjct: 9   AIEAAMRAAFPQADERVARFYAMQEYHLGWRDEDLQPA----SFAPGKLLRPRLCLLSCR 64

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +   +   AL + AAI+ +H +SLIHDD+   D    RRG+PTV   +     I  G+G+
Sbjct: 65  VVGGDPRDALPLAAAIQLLHDFSLIHDDIQ--DQSDTRRGRPTVWKLWGLAQGINTGDGM 122

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
            T A   +               +L       L  +  GQ LD+  E    IDE+    +
Sbjct: 123 FTIAHLALHRLSLTGVPPATVLDVLRRFDETILT-ICEGQFLDLSYEGNLQIDESAYLAM 181

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + KT AL+  + E GA++  A +   + L  FG  LG+ FQ+ DD+L    D
Sbjct: 182 IERKTAALIAASAELGALVGGADEETIQALFDFGRALGLAFQIEDDVLGIWGD 234


>gi|90425826|ref|YP_534196.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB18]
 gi|90107840|gb|ABD89877.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB18]
          Length = 336

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 19/236 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
             L   +  + +R++ ++   L +T S   M  +  + L+S+      GGK++R  L   
Sbjct: 16  DQLVELVAADMERVNAVI---LSRTGSEVTMIPEVANHLISS------GGKRLRPNLTLA 66

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L   +    +++ AA+E +H  +L+HDD+  +D   +RRGK +  + +    +++ G
Sbjct: 67  MAQLTGYSGEGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSARMLWGNEASVLVG 124

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL  AF ++    +     +R+  +LS       +G +  Q+   ++    E +   +
Sbjct: 125 DFLLGQAFRMMVEVGS-----LRALDILSSAAATIAEGEVM-QLAAAKNTATTEDEYLAV 178

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KT  L   ACE G  +A   + E+   R FG NLGI FQL DD+LD      K
Sbjct: 179 IRGKTAELFAAACEVGPAIAGRPKAEQSACRSFGMNLGIAFQLVDDVLDYGGKAAK 234


>gi|332200654|gb|EGJ14726.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA41317]
          Length = 291

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L   +
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 36/228 (15%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
                  + + +  +   LD+ +         +   ++  A+RY+LL GGK+        
Sbjct: 67  TFNFKDYMIQKASSVHKALDEAVY-------VKSPIKIHEAMRYSLLAGGKR-------- 111

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                      A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG
Sbjct: 112 ---------SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAG 162

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + LL +AFE +++  + +  +     +  L  +IG +G++ GQ++DI       +   Q+
Sbjct: 163 DSLLAFAFEHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQL 222

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK--------ERLRCFGENL 217
             I   KT AL+  A   GA++   S  E         E+ R F ENL
Sbjct: 223 EFIHIHKTAALLEAAVVLGALLGGGSDEEATYPKLMGLEKSREFAENL 270


>gi|315127756|ref|YP_004069759.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas sp.
           SM9913]
 gi|315016270|gb|ADT69608.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas sp.
           SM9913]
          Length = 323

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFN 66
           ++     I++ ++D+      H Q + +  L++ +  Y +  GGK++R  L    A    
Sbjct: 3   IKAIQALIESDMNDV--NQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAAKALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + +   IE IH  +L+HDD+  +D   +RRG PT + ++    +++ G+ + T 
Sbjct: 61  YQGKDHITLATIIEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F+++          ++   +L+   NI  +G +  Q+++  D    E     +   KT 
Sbjct: 119 SFQLMVGLG-----KMQIMQVLADATNIIAEGEVL-QLMNCNDPDTTEASYMQVIYSKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A    AI+     +  E L  +G +LG  FQL DD+LD   D
Sbjct: 173 KLFEAATGLAAIITDQDDSVLEALNLYGMHLGTAFQLVDDVLDYNAD 219


>gi|311030284|ref|ZP_07708374.1| heptaprenyl diphosphate synthase component II [Bacillus sp. m3-13]
          Length = 320

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 15/226 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S L  + + I+  L +  +QT   +  + +  LL A      GGK+IR   V   A L  
Sbjct: 8   SFLNNDLQIIENEL-EATIQTERALLQEASLHLLQA------GGKRIRPVFVLLAAKLGA 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +      V  A+E +H  SL+HDD+  +D+  +RRGK T+  ++D   A+  G+ +   
Sbjct: 61  YDIHKVKNVAVALELMHMASLVHDDV--IDDAELRRGKSTIKAKWDNRIAMYTGDYIFAR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           + E+++       ++I +  +LS T     +G +  Q+ D  +   +        K KT 
Sbjct: 119 SLEMMTK-----VEDIEAHRILSNTLVELCKGEIE-QIRDKYNYDQNLRTYLRRIKRKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L+  +C+ GAI +    +  + L  FG  +G+ FQ+ DD+LD   
Sbjct: 173 ILIAVSCQLGAITSGVPASVHQSLYWFGYYVGMSFQITDDILDFTS 218


>gi|219871055|ref|YP_002475430.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165]
 gi|219691259|gb|ACL32482.1| octaprenyl-diphosphate synthase [Haemophilus parasuis SH0165]
          Length = 327

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANTVGYKGQEHITCAAFVEFIHTATLLHDDV--VDESDMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++S  +     +    ++S   N+  +G +  Q++++ 
Sbjct: 105 ARFGNAASVLVGDFIYTRAFQMMASLCS-----LDVLQVMSDATNVIAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A +  AI++ A Q     +R +G  LG  FQL DD+L
Sbjct: 159 NPETTEANYMQVIYSKTARLFEAASQCSAIVSGADQATVIAMRDYGRYLGTAFQLVDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|126695982|ref|YP_001090868.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9301]
 gi|126543025|gb|ABO17267.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9301]
          Length = 323

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +  
Sbjct: 4   VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 64  FCLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D      +       KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFPKYINKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD   
Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTG 222


>gi|90408282|ref|ZP_01216447.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3]
 gi|90310583|gb|EAS38703.1| octaprenyl-diphosphate synthase [Psychromonas sp. CNPT3]
          Length = 325

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   NV+     ++ A IE +H  +L+HDD+  +D   +RRGK T +
Sbjct: 45  GGKRIRPLITILAAKALNVHSEKITKLAAIIEFVHTATLLHDDV--VDESDLRRGKKTAN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F+++S  +     N++   +LS   NI  +G +  Q+++  
Sbjct: 103 ALFGNAASVLVGDFLYTRSFQMMSELQ-----NLKVMDVLSRATNIIAEGEVL-QLMNCN 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     I   KT  L   A +   ++A  +   +  L  +G+ LG  FQL DD++
Sbjct: 157 DANISEKLYMDIIYYKTAKLFEAATQLVGVLAEQTPEIELALLNYGKYLGTAFQLTDDVM 216

Query: 229 DCEE 232
           D   
Sbjct: 217 DYTS 220


>gi|225626910|ref|ZP_03784949.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella ceti str. Cudo]
 gi|225618567|gb|EEH15610.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella ceti str. Cudo]
          Length = 363

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 82  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 139

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 140 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 193

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 194 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 253

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 254 DYGGSAADLGK 264


>gi|163792420|ref|ZP_02186397.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
 gi|159182125|gb|EDP66634.1| Geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
          Length = 340

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 8/227 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + +    + +D  +  +      HMQ+        A      GGK++R  L    A L  
Sbjct: 17  ASVDALRRLVDANMLKVNRAILEHMQSPVALIPQLAGHIVASGGKRLRPMLTLATAGLCG 76

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + 
Sbjct: 77  YTGERHIGLAACVEFIHTATLLHDDV--VDESDLRRGQDTANAVWGNQASVLVGDFLFSR 134

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++    +     ++   +LS    I  +G +  Q++   D    E     + + KT 
Sbjct: 135 AFQLMVGDGS-----LKVLKILSDASAIIAEGEVH-QLITTNDIDTTEAAYLEVIRCKTA 188

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A + G ++A   + E+  L  FG +LG+ FQL DD+LD   +
Sbjct: 189 QLFAAAAQIGPVVAERPEAEEMALEGFGRDLGVAFQLVDDVLDYAAE 235


>gi|157415864|ref|YP_001483120.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386828|gb|ABV53143.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748501|gb|ADN91771.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni M1]
          Length = 281

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 35  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 95  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 213 DDIIDVT 219


>gi|222475573|ref|YP_002563990.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Florida]
 gi|255003563|ref|ZP_05278527.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Puerto Rico]
 gi|222419711|gb|ACM49734.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Florida]
          Length = 327

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 14/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRSFL 57
           M+      L +    +   L+DL       + T ++D    A       L GGK+IR  L
Sbjct: 1   MSDAFNRALIDLKSLV---LEDLQAMEQLIVDTSNSDISYIADIVSHLMLSGGKRIRPIL 57

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           +     +  +     +R+ AAIE IH  +L+HDD+  +D   +RRG  T +  +    +I
Sbjct: 58  LLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASI 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ LL  AF+ I S       N     +LS      + G +  QM+  ++  I   + 
Sbjct: 116 LVGDFLLAAAFQWIVSCG-----NFELLTVLSGASRTIVAGEI-QQMVYSKNLDITREKY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KT AL    CES  +++ +    +E LR FG N GI FQ+ DDLLD   
Sbjct: 170 IEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224


>gi|167043490|gb|ABZ08187.1| putative Polyprenyl synthetase [uncultured marine microorganism
           HF4000_APKG2H5]
          Length = 575

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 16/228 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
           + KR++ I+ D L +          +RL  A+ +   GG K++R+ +           H 
Sbjct: 259 HRKRVEGIIMDSLGKM-------QQERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHD 311

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +GA+IE IH ++L+HDD+  +D   IRRG   VH+ YD+ TAI AG+ +L   FEI
Sbjct: 312 GHYTLGASIEIIHNFTLVHDDI--IDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFEI 369

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGA 187
           ++       D +     L  T    ++ +  GQ  DI+ E    + E     +   KT A
Sbjct: 370 LAESPEIDADKLA---FLVSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITGKTSA 426

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +      +GAI+A AS    + +  +G NLG+ FQL DDL+D   D  
Sbjct: 427 MFETCATTGAILAGASDEIVDNMAIWGLNLGLCFQLMDDLIDITGDTE 474


>gi|194396799|ref|YP_002037809.1| geranyltranstransferase [Streptococcus pneumoniae G54]
 gi|194356466|gb|ACF54914.1| geranyltranstransferase [Streptococcus pneumoniae G54]
          Length = 291

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L   +
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQXLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|147677304|ref|YP_001211519.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
           thermopropionicum SI]
 gi|146273401|dbj|BAF59150.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
           thermopropionicum SI]
          Length = 321

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 23/239 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  +++ + + ++  L   ++QT + + T+ +  LL+A      GGK++R  L    A 
Sbjct: 3   ELFDEIKGDLQVVEEEL-RAVVQTQNPLLTETSTHLLNA------GGKRLRPALCLFGAK 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +N N    L +  A+E IH  +L+HDD+  +D    RRG PTV  ++    +   G  L
Sbjct: 56  FYNYNLEKVLPLAVALELIHMATLVHDDV--VDASMTRRGIPTVKAKWGNSISTHVGTYL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMI 180
              +  ++S  +           +++   +     M  G++  I   F       +    
Sbjct: 114 FAKSLILLSKYEKT--------PIIARVLSSISVKMCEGEIQQISSSFNICQSIKEYLHR 165

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            K+KT  L+  + + GA    A  +    LR +G N+G+ FQ+ DD+LD    E  L K
Sbjct: 166 IKLKTALLIAASIQLGAAACGAPVSIHLPLRRYGHNIGMAFQITDDILDMVAEESQLGK 224


>gi|89093572|ref|ZP_01166520.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92]
 gi|89082262|gb|EAR61486.1| farnesyl pyrophosphate synthetase [Oceanospirillum sp. MED92]
          Length = 322

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 12/197 (6%)

Query: 44  RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y +  GGK++R  LV   A+         + + A IE IH  +L+HDD+  +DN  +RR
Sbjct: 37  HYIVESGGKRLRPLLVLLAANAAGYKGDKHVPLAAIIEFIHTATLLHDDV--VDNSDLRR 94

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           GK T + ++    +++ G+ L + AF+I+    +     ++   ++S   N+  +G +  
Sbjct: 95  GKDTANAKWGNAPSVLVGDFLYSRAFQIMVEIGS-----MQIMEVISNATNVIAEGEVL- 148

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+L+ ++    E     +   KT  L   A E+GAI+A A+  E+E LR +G +LG  FQ
Sbjct: 149 QLLNTKNPDTTEEAYMQVILGKTAMLFEAATEAGAILADATAEEREGLRLYGLHLGTAFQ 208

Query: 223 LADDLLDC---EEDLPK 236
           L DD++D     E++ K
Sbjct: 209 LIDDVMDYLSTAEEMGK 225


>gi|331084735|ref|ZP_08333823.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410829|gb|EGG90251.1| hypothetical protein HMPREF0987_00126 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 296

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 12/237 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN     + ++ ++ I+ IL   L       Q      ++ A+ Y+L+ GGK++R  L+ 
Sbjct: 1   MN--FRDEKRKKTEEIEQILKAYLPVQEGKQQV-----IMEAMEYSLMAGGKRLRPMLLW 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E   +F     T     AAIE IH YSL+HDDLP+MD+   RRG+ T HI Y E   I+A
Sbjct: 54  ETFQMFGSAAKTVRPFMAAIEMIHTYSLVHDDLPAMDDDDYRRGRKTTHIVYGEDMGILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNI--RSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDET 175
           G+ LL YAFE   +   +  +      + +  L    G+ GM+GGQ++D+    + I E 
Sbjct: 114 GDALLNYAFETACTAFEEAPEEATRIGKALQVLAKKAGIYGMIGGQVVDVSASGKNITED 173

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  I ++KTGAL+  A   GAI+A A + E   +    + +GI FQ+ DD+LD   
Sbjct: 174 ILSFIYELKTGALLESAMMIGAILAGAEEEEVAVIEQVAKKIGIAFQIQDDILDVTS 230


>gi|57238655|ref|YP_179786.1| geranyltranstransferase [Campylobacter jejuni RM1221]
 gi|57167459|gb|AAW36238.1| geranyltranstransferase [Campylobacter jejuni RM1221]
 gi|315059094|gb|ADT73423.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 281

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 35  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 95  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 213 DDIIDVT 219


>gi|84515724|ref|ZP_01003085.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
 gi|84510166|gb|EAQ06622.1| decaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
          Length = 332

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 14/217 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           ++ ++ D +    +    Q    L+ A      GGK++R  L    A +   +    + +
Sbjct: 25  VNAMIRDRMASEHAPRIPQVTAHLVEA------GGKRLRPMLTLAAARMCGYDGPYHIHL 78

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A +E IH  +L+HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    
Sbjct: 79  AATVEFIHTATLLHDDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETG 136

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           +     +R   +L+       +G +  Q+    D    E     + + KT AL   A E 
Sbjct: 137 S-----LRVLDILANASATIAEGEVL-QLTAAADLATTEDIYIKVVRGKTAALFSAAMEV 190

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G  +A      K+ L  +G+ LGI FQ+ DDLLD   
Sbjct: 191 GGEIAGQDPAIKQALFDYGDALGISFQIVDDLLDYGG 227


>gi|315121918|ref|YP_004062407.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495320|gb|ADR51919.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 322

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 9/197 (4%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +   ++Y +  GGK++R  L    A +        + +  AIE IH  +L+HDD+  +D+
Sbjct: 30  IPDVVKYLIFSGGKRLRPMLTVATALMLEYRGNNHVLLACAIEFIHTATLLHDDV--VDD 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGK    + +    +++ G+ LL+ AF ++   K+Q    + S +  +L+      
Sbjct: 88  SALRRGKAAARLVWGNQASVLVGDFLLSQAFSMVIETKSQEALKVLSLVACTLSEGE--- 144

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                Q+   ++  + E     + K KT AL   A E  ++++ A  + ++ L+ +G NL
Sbjct: 145 ---LRQLSISKNLNVTEEDYLYVIKSKTAALFVAALEVSSLISGAQDSVRDALKSYGTNL 201

Query: 218 GIIFQLADDLLDCEEDL 234
           GI FQL DD LD   ++
Sbjct: 202 GIAFQLVDDALDYRGEV 218


>gi|282901404|ref|ZP_06309329.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281193683|gb|EFA68655.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 323

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL- 73
           ++  L  +L    + +    +  L +A  +    GGK+IR  +V   +    +    +L 
Sbjct: 11  VEADL-RILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATTLEEDISLG 69

Query: 74  --RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   IRRG PTVH  +    A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESDIRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q L+  D  +           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSEVIMDLAAGEI------QQGLNRFDTNLSIETYLKKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  I+++ S      L  +G++LG+ FQ+ DD+LD   
Sbjct: 182 SAKAAGILSNVSSESANNLYNYGKDLGLAFQIVDDILDFTG 222


>gi|33519569|ref|NP_878401.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus]
 gi|33517232|emb|CAD83615.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia floridanus]
          Length = 324

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 12/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLL---SAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I+ ++   ++     +  +    ++     I+Y +  GGKKIRS ++   A     N  
Sbjct: 5   QINKLIKQDIININFEIHKRLKSNIILINKFIKYIINSGGKKIRSTMILLIAKSLTYNKT 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +   IE IH  +L+HDD+  +D+   RRGK T +I +    +I+ G+ + T AF++
Sbjct: 65  QHTILATLIEFIHTATLLHDDV--IDHSTTRRGKTTANIIFGNPASILIGDFIYTRAFQM 122

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++  ++     +R   +++   NI  +G +  Q+    D  I       I   KT  L  
Sbjct: 123 MTELQS-----LRILSLMADAVNIIAEGEIL-QLTYCNDPTITMNNYMQIIYKKTARLFE 176

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A +S AI+AHA+  +++ L  +G+ +GI FQL DDLLD 
Sbjct: 177 VASQSSAILAHANIQQEQALSNYGKYIGIAFQLIDDLLDY 216


>gi|117509|sp|P21684|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; AltName: Full=Farnesyltranstransferase
 gi|216682|dbj|BAA14124.1| crtE [Pantoea ananatis]
 gi|325559605|gb|ADZ30887.1| geranylgeranyl pyrophosphate synthase [MoClo level 2 destination
           vector pL2-1]
 gi|325559616|gb|ADZ30895.1| geranylgeranyl pyrophosphate synthase [MoClo end-linker vector
           pELR-1]
          Length = 302

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
           ++    ID  LD LL            D + +A+R  AL  GK+IR  L+   A      
Sbjct: 17  EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 70

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V+H   L +  A+E +H  SLI DD+P MD+  +RRG+PT+H  Y E  AI+A   LL+ 
Sbjct: 71  VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 130

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
           AF +I+     L    +++ +  L++ IG+QG++ GQ  D    D+      + M    K
Sbjct: 131 AFGVIADAD-GLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFK 189

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T  L C + +  +I+A+AS   ++ L  F  +LG  FQL DDL D   D  K
Sbjct: 190 TSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 241


>gi|91070262|gb|ABE11181.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone
           HF10-11H7]
          Length = 323

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +  
Sbjct: 4   VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 64  FCLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D     ++       KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD   
Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTG 222


>gi|23501305|ref|NP_697432.1| polyprenyl synthetase family protein [Brucella suis 1330]
 gi|161618375|ref|YP_001592262.1| hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365]
 gi|254703754|ref|ZP_05165582.1| hypothetical protein Bsuib36_07492 [Brucella suis bv. 3 str. 686]
 gi|260566991|ref|ZP_05837461.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
 gi|261754401|ref|ZP_05998110.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
 gi|23347194|gb|AAN29347.1| polyprenyl synthetase family protein [Brucella suis 1330]
 gi|161335186|gb|ABX61491.1| Hypothetical protein BCAN_A0405 [Brucella canis ATCC 23365]
 gi|260156509|gb|EEW91589.1| polyprenyl synthetase [Brucella suis bv. 4 str. 40]
 gi|261744154|gb|EEY32080.1| polyprenyl synthetase [Brucella suis bv. 3 str. 686]
          Length = 340

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +       +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----FDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 231 DYGGSAADLGK 241


>gi|149008192|ref|ZP_01831697.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74]
 gi|225858990|ref|YP_002740500.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae 70585]
 gi|307127203|ref|YP_003879234.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B]
 gi|147760373|gb|EDK67353.1| geranyltranstransferase [Streptococcus pneumoniae SP18-BS74]
 gi|225720031|gb|ACO15885.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae 70585]
 gi|306484265|gb|ADM91134.1| geranyltranstransferase [Streptococcus pneumoniae 670-6B]
 gi|332074540|gb|EGI85014.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA17545]
          Length = 291

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L   +
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|292490245|ref|YP_003525684.1| trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4]
 gi|291578840|gb|ADE13297.1| Trans-hexaprenyltranstransferase [Nitrosococcus halophilus Nc4]
          Length = 322

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 19/226 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAI-------RYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           DL+      +      RL S +        Y +  GGK++R  +V   A  F+      +
Sbjct: 8   DLIADDMQAVNGLIQKRLHSDVVLINQLGHYIINSGGKRLRPVVVLLSARAFDYQGSCHI 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +   IE IH  +L+HDD+  +D+  +RRG+ T +  +    +++ G+ L + AFE++  
Sbjct: 68  DIATIIEFIHTATLLHDDV--VDSSELRRGQKTANSIWGSEASVLVGDFLYSRAFEMMVD 125

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 +++R   +L+ T N   +G +  Q+L+  D    E +   + + KT  L   A 
Sbjct: 126 -----VNSMRVMEILARTTNTIAEGEVM-QLLNCHDPDTTEERYLDVIRSKTAKLFEAAT 179

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + GA+++     E+E +  +G +LG  FQL DD+LD      DL K
Sbjct: 180 QLGAVLSCRPAAEEEAMAAYGMHLGTAFQLTDDVLDYSASSDDLGK 225


>gi|306825094|ref|ZP_07458436.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432530|gb|EFM35504.1| geranyltranstransferase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 291

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 76/227 (33%), Positives = 123/227 (54%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  A+ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLQVV 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IRPAYAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L + I+  L+++L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPNQIKVDLIVNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|82699315|ref|YP_413889.1| polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
 gi|225851937|ref|YP_002732170.1| hypothetical protein BMEA_A0432 [Brucella melitensis ATCC 23457]
 gi|254688701|ref|ZP_05151955.1| hypothetical protein Babob68_00654 [Brucella abortus bv. 6 str.
           870]
 gi|254718581|ref|ZP_05180392.1| hypothetical protein Bru83_03399 [Brucella sp. 83/13]
 gi|254729734|ref|ZP_05188312.1| hypothetical protein Babob42_00662 [Brucella abortus bv. 4 str.
           292]
 gi|256044121|ref|ZP_05447028.1| hypothetical protein Bmelb1R_06464 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112919|ref|ZP_05453832.1| hypothetical protein Bmelb3E_09565 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159107|ref|ZP_05456928.1| hypothetical protein BcetM4_09356 [Brucella ceti M490/95/1]
 gi|256368857|ref|YP_003106363.1| polyprenyl synthetase family protein [Brucella microti CCM 4915]
 gi|260545860|ref|ZP_05821601.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
 gi|260563478|ref|ZP_05833964.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260754179|ref|ZP_05866527.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757399|ref|ZP_05869747.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761223|ref|ZP_05873566.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883204|ref|ZP_05894818.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213426|ref|ZP_05927707.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261218414|ref|ZP_05932695.1| polyprenyl synthetase [Brucella ceti M13/05/1]
 gi|261221617|ref|ZP_05935898.1| polyprenyl synthetase [Brucella ceti B1/94]
 gi|261315356|ref|ZP_05954553.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317077|ref|ZP_05956274.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
 gi|261320737|ref|ZP_05959934.1| polyprenyl synthetase [Brucella ceti M644/93/1]
 gi|261324532|ref|ZP_05963729.1| polyprenyl synthetase [Brucella neotomae 5K33]
 gi|261757634|ref|ZP_06001343.1| polyprenyl synthetase [Brucella sp. F5/99]
 gi|265983557|ref|ZP_06096292.1| polyprenyl synthetase [Brucella sp. 83/13]
 gi|265988115|ref|ZP_06100672.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
 gi|265990531|ref|ZP_06103088.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994359|ref|ZP_06106916.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265997580|ref|ZP_06110137.1| polyprenyl synthetase [Brucella ceti M490/95/1]
 gi|265999601|ref|ZP_05467084.2| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|297247801|ref|ZP_06931519.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196]
 gi|82615416|emb|CAJ10385.1| Polyprenyl synthetase [Brucella melitensis biovar Abortus 2308]
 gi|225640302|gb|ACO00216.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|255999015|gb|ACU47414.1| polyprenyl synthetase family protein [Brucella microti CCM 4915]
 gi|260097267|gb|EEW81142.1| polyprenyl synthetase [Brucella abortus NCTC 8038]
 gi|260153494|gb|EEW88586.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260667717|gb|EEX54657.1| polyprenyl synthetase [Brucella abortus bv. 4 str. 292]
 gi|260671655|gb|EEX58476.1| polyprenyl synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674287|gb|EEX61108.1| polyprenyl synthetase [Brucella abortus bv. 6 str. 870]
 gi|260872732|gb|EEX79801.1| polyprenyl synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915033|gb|EEX81894.1| polyprenyl synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260920201|gb|EEX86854.1| polyprenyl synthetase [Brucella ceti B1/94]
 gi|260923503|gb|EEX90071.1| polyprenyl synthetase [Brucella ceti M13/05/1]
 gi|261293427|gb|EEX96923.1| polyprenyl synthetase [Brucella ceti M644/93/1]
 gi|261296300|gb|EEX99796.1| polyprenyl synthetase [Brucella pinnipedialis B2/94]
 gi|261300512|gb|EEY04009.1| polyprenyl synthetase [Brucella neotomae 5K33]
 gi|261304382|gb|EEY07879.1| polyprenyl synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737618|gb|EEY25614.1| polyprenyl synthetase [Brucella sp. F5/99]
 gi|262552048|gb|EEZ08038.1| polyprenyl synthetase [Brucella ceti M490/95/1]
 gi|262765472|gb|EEZ11261.1| polyprenyl synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001315|gb|EEZ13890.1| polyprenyl synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094886|gb|EEZ18624.1| polyprenyl synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660312|gb|EEZ30573.1| polyprenyl synthetase [Brucella pinnipedialis M292/94/1]
 gi|264662149|gb|EEZ32410.1| polyprenyl synthetase [Brucella sp. 83/13]
 gi|297174970|gb|EFH34317.1| octaprenyl-diphosphate synthase [Brucella abortus bv. 5 str. B3196]
          Length = 340

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 231 DYGGSAADLGK 241


>gi|91200422|emb|CAJ73469.1| similar to octaprenyl diphosphate synthase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 323

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 8/219 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           I+ ++D++  +    +Q Q+N      +  +   GK++R  L        +      + +
Sbjct: 10  IEPLMDEVEARFYKELQPQNNSLADLVVHISKYKGKRLRPALTLLSGKCISDTAPQHIDL 69

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E +H  +L+HDD+  +D   +RR   +++ ++    +I+ G+ L +  F I+S+  
Sbjct: 70  AVVVEMVHTATLVHDDI--IDEAAMRRHVESMNSKWGREISILFGDYLFSRGFTILSALD 127

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           +Q+   + SQ + ++     +      Q+    D  + E     I + KT +L   +C  
Sbjct: 128 SQIATLLLSQTVNTMCEGELI------QLKRRYDVGLSEEDYIDIIEKKTASLCATSCRL 181

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           GA  A A+    E +  +G  +G  FQ+ DD LD   D 
Sbjct: 182 GATFAGANHKLSEMMSNYGLKIGTAFQIIDDCLDFMGDE 220


>gi|123968209|ref|YP_001009067.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. AS9601]
 gi|123198319|gb|ABM69960.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. AS9601]
          Length = 323

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +  
Sbjct: 4   VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 64  FCLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D     ++       KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD   
Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYDFGKNIGLAFQVVDDILDFTG 222


>gi|78779003|ref|YP_397115.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9312]
 gi|78712502|gb|ABB49679.1| Trans-hexaprenyltranstransferase [Prochlorococcus marinus str. MIT
           9312]
          Length = 323

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+ +  + +   H     +A      GGK++R  +V   +   +  
Sbjct: 4   VTELLQPVENDLDDLIFELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISSE 63

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 64  FCLTNKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D     ++       KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +C++  +++  S  +   L  FG+N+G+ FQ+ DD+LD   
Sbjct: 176 ASLIANSCKAAGVLSDLSDEKLNSLYDFGKNIGLAFQVVDDILDFTG 222


>gi|319408199|emb|CBI81852.1| octaprenyl-diphosphate synthase [Bartonella schoenbuchensis R1]
          Length = 338

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 15/223 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           ++N +R++ ++  ++ Q    M  +  + L+S+      GGK++R  +    A +F    
Sbjct: 25  KDNMERVNQLIISMV-QADVEMIPEICNYLISS------GGKRLRPMITLAAADMFGYQG 77

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++  AIE +H  +L+HDD+  +D   +RRGK T  + +    +++ G+ LL  AF+
Sbjct: 78  DGHIKLATAIEFMHTATLLHDDV--VDESNLRRGKSTARMIWGNKASVLVGDFLLGQAFK 135

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           +I    +     + +  +L+    I  +G +  Q+   Q+     +    I   KT AL 
Sbjct: 136 MIVDVGS-----MEALTILANAAAIIAEGEVM-QLAAAQNIETTASDYLKIINAKTAALF 189

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A E G I+A     E+  LR +G +LG+ FQL DD LD   
Sbjct: 190 SAAAEVGPIIAGYGHEERLALREYGTSLGLAFQLVDDALDYSG 232


>gi|86149392|ref|ZP_01067623.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86153173|ref|ZP_01071378.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|88596676|ref|ZP_01099913.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|148925783|ref|ZP_01809471.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|218563233|ref|YP_002345013.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|85840174|gb|EAQ57432.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85844058|gb|EAQ61268.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|88191517|gb|EAQ95489.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360940|emb|CAL35741.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|145845793|gb|EDK22884.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|284926838|gb|ADC29190.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315927606|gb|EFV06937.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929482|gb|EFV08678.1| Geranyltranstransferase [Campylobacter jejuni subsp. jejuni 305]
          Length = 281

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 35  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 95  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 213 DDIIDVT 219


>gi|296134998|ref|YP_003642240.1| Polyprenyl synthetase [Thiomonas intermedia K12]
 gi|295795120|gb|ADG29910.1| Polyprenyl synthetase [Thiomonas intermedia K12]
          Length = 326

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 20/238 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
             + + + E+ + +D  +   L    + + T           Y + GG K++R  L+   
Sbjct: 8   HSVFAPITEDMESVDRAIHTHLASEVALINTIGG--------YIVAGGGKRLRPALLLLV 59

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+
Sbjct: 60  SQALGFRGPQQHIMAAVVELIHTATLLHDDV--VDESSMRRGRETSNALFGNSASVLVGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + AF+++ S  +     +R   +L+   N+  +G +  Q+L++ D  +DE +   + 
Sbjct: 118 FLYSRAFQMMVSVGS-----MRILNILADATNVIAEGEVL-QLLNMHDPEVDEQRYLQVI 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           + KT  L   A   GA++A A  N +E +   G + G  FQL DDLLD      +L K
Sbjct: 172 RFKTAKLFEAAARIGAVLADADANTQEEMALAGRSFGTAFQLIDDLLDYSGNSAELGK 229


>gi|163842683|ref|YP_001627087.1| hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445]
 gi|163673406|gb|ABY37517.1| Hypothetical protein BSUIS_A0427 [Brucella suis ATCC 23445]
          Length = 340

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 231 DYGGSAADLGK 241


>gi|110597409|ref|ZP_01385696.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM
           13031]
 gi|110340953|gb|EAT59424.1| Trans-hexaprenyltranstransferase [Chlorobium ferrooxidans DSM
           13031]
          Length = 324

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 10/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           +++ +  ++  + ++  Q    +    N  +    RY L   GK+IR  LV   A L   
Sbjct: 3   IKDVTASVNDEI-EIFQQRYKTVLYAQNTLVDKVTRYVLKQQGKQIRPALVLLSAQLCGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            + ++ R    +E +H  +LIHDD+  +D   +RRG  +++  +    +++ G+ LL+  
Sbjct: 62  VNESSYRAAIMVELLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSRG 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
                  K     ++ S+ +  ++    L      Q+   +   I E     +   KT +
Sbjct: 120 LLYSLEHKDYGFLHMVSEAVRRMSEGEIL------QIQKTRSLDISEEDYLSVISDKTAS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  AC  GA+ +   ++    L+ +GE LG+ FQ+ DDLLD   D  K
Sbjct: 174 LISSACAMGAMSSTTDESAIASLKSYGEYLGLAFQIRDDLLDYTGDSKK 222


>gi|261751747|ref|ZP_05995456.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
 gi|261741500|gb|EEY29426.1| polyprenyl synthetase [Brucella suis bv. 5 str. 513]
          Length = 340

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 231 DYGGSAADLGK 241


>gi|157413035|ref|YP_001483901.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9215]
 gi|157387610|gb|ABV50315.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9215]
          Length = 323

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +  
Sbjct: 4   VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 64  FCLTSKHKRLAEITEMIHTASLVHDDV--VDEAATRRGVDTVHSRFNTRVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D     ++       KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD   
Sbjct: 176 ASLIANSCKAAGVLSGINDENLTSLYEFGKNIGLAFQVVDDILDFTG 222


>gi|75907691|ref|YP_321987.1| polyprenyl synthetase [Anabaena variabilis ATCC 29413]
 gi|75701416|gb|ABA21092.1| Polyprenyl synthetase [Anabaena variabilis ATCC 29413]
          Length = 323

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  +L      +    +  L +A  +    GGK+IR  +V   +    +       
Sbjct: 11  VEADL-RILADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLEQDITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  +    AI+AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESEVRRGVPTVHSLFGNRIAILAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q L+  D  I           KT +L+  
Sbjct: 128 ANLDNLQVVKLLSEVIMDLATGEI------QQGLNRFDASISIENYIEKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  S    E L  +G +LGI FQ+ DD+LD   
Sbjct: 182 SSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVDDILDFTS 222


>gi|15901068|ref|NP_345672.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4]
 gi|111657819|ref|ZP_01408536.1| hypothetical protein SpneT_02001001 [Streptococcus pneumoniae
           TIGR4]
 gi|148998635|ref|ZP_01826074.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70]
 gi|168577215|ref|ZP_02723024.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae MLV-016]
 gi|182684065|ref|YP_001835812.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14]
 gi|225860956|ref|YP_002742465.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230892|ref|ZP_06964573.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254303|ref|ZP_06977889.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502796|ref|YP_003724736.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|303254296|ref|ZP_07340405.1| geranyltranstransferase [Streptococcus pneumoniae BS455]
 gi|303258839|ref|ZP_07344818.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293]
 gi|303261523|ref|ZP_07347470.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292]
 gi|303264193|ref|ZP_07350113.1| geranyltranstransferase [Streptococcus pneumoniae BS397]
 gi|303266176|ref|ZP_07352069.1| geranyltranstransferase [Streptococcus pneumoniae BS457]
 gi|303268097|ref|ZP_07353897.1| geranyltranstransferase [Streptococcus pneumoniae BS458]
 gi|307067855|ref|YP_003876821.1| geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae
           AP200]
 gi|14972686|gb|AAK75312.1| geranyltranstransferase [Streptococcus pneumoniae TIGR4]
 gi|147755472|gb|EDK62520.1| GTP-binding protein LepA [Streptococcus pneumoniae SP11-BS70]
 gi|182629399|gb|ACB90347.1| geranyltranstransferase [Streptococcus pneumoniae CGSP14]
 gi|183577213|gb|EDT97741.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae MLV-016]
 gi|225727927|gb|ACO23778.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238391|gb|ADI69522.1| geranyltranstransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|301801934|emb|CBW34659.1| putative geranyltranstransferase [Streptococcus pneumoniae INV200]
 gi|302598790|gb|EFL65827.1| geranyltranstransferase [Streptococcus pneumoniae BS455]
 gi|302637103|gb|EFL67591.1| geranyltranstransferase [Streptococcus pneumoniae SP14-BS292]
 gi|302639782|gb|EFL70238.1| geranyltranstransferase [Streptococcus pneumoniae SP-BS293]
 gi|302642314|gb|EFL72661.1| geranyltranstransferase [Streptococcus pneumoniae BS458]
 gi|302644346|gb|EFL74600.1| geranyltranstransferase [Streptococcus pneumoniae BS457]
 gi|302646005|gb|EFL76232.1| geranyltranstransferase [Streptococcus pneumoniae BS397]
 gi|306409392|gb|ADM84819.1| Geranylgeranyl pyrophosphate synthase [Streptococcus pneumoniae
           AP200]
 gi|327389445|gb|EGE87790.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA04375]
          Length = 291

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L   +
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|254780755|ref|YP_003065168.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040432|gb|ACT57228.1| octaprenyl-diphosphate synthase protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 322

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 9/199 (4%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + +   ++Y +  GGK++R  L    A +        + +  AIE IH  +L+HDD+  +
Sbjct: 28  EMIPDVVKYLIFSGGKRLRPMLTLATALMLEYRGDNHVLLACAIEFIHTATLLHDDV--V 85

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRGK    + +   T+++ G+ LL+ AF ++   K+Q      S +  +L     
Sbjct: 86  DDSALRRGKVAARLVWGNQTSVLVGDFLLSQAFCMVIETKSQEALEALSLVACTLAEGE- 144

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  Q+   ++  + E     + K KT  L   A E  +++A    + ++ L+ +G 
Sbjct: 145 -----LRQLSLSKNLDVTEEDYLHVIKSKTAVLFSAALEVSSLIAGVQNSVRQALKSYGM 199

Query: 216 NLGIIFQLADDLLDCEEDL 234
           NLGI FQL DD+LD   ++
Sbjct: 200 NLGIAFQLVDDVLDYRGEV 218


>gi|55377016|ref|YP_134866.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC
           43049]
 gi|55229741|gb|AAV45160.1| geranylgeranyl diphosphate synthase [Haloarcula marismortui ATCC
           43049]
          Length = 346

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 33/255 (12%)

Query: 9   LQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           + E  ++++  +    D +       +  Q  D L  A RY L  GGK++R  ++   A 
Sbjct: 1   MSERHQQVEDAIVARRDRVNDALPEDLPVQKPDHLYEASRYLLDAGGKRLRPTVLLLVAE 60

Query: 64  -LFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            L +V+ LTA               +    AIE I  ++LIHDD+  MD+  +RRG P V
Sbjct: 61  SLLDVDPLTADYRDFPTLEGGQADMMSAALAIEVIQTFTLIHDDI--MDDDALRRGVPAV 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +YD  TAI+AG+ L + AFE +       +  + +   L+ T       +  GQ LDI
Sbjct: 119 HKEYDLSTAILAGDTLYSKAFEFLLETGAAHERTVDANKRLATT----CTRICEGQSLDI 174

Query: 168 QDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           + E  D     +   + ++KT  L   A    A +  A +   + L  +G ++G  FQ+ 
Sbjct: 175 EFEQRDVVTPEEYLEMVELKTAVLYGAAASIPATLLGADEQTVDALYNYGLDVGRAFQIQ 234

Query: 225 DDLLDCE---EDLPK 236
           DDLLD     E L K
Sbjct: 235 DDLLDLTTPSEKLGK 249


>gi|17987815|ref|NP_540449.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella melitensis bv. 1 str. 16M]
 gi|17983542|gb|AAL52713.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella melitensis bv. 1 str. 16M]
          Length = 362

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 81  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 139 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 192

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 193 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 252

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 253 DYGGSAADLGK 263


>gi|301169600|emb|CBW29201.1| octaprenyl diphosphate synthase [Haemophilus influenzae 10810]
          Length = 329

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|294851781|ref|ZP_06792454.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026]
 gi|294820370|gb|EFG37369.1| octaprenyl-diphosphate synthase [Brucella sp. NVSL 07-0026]
          Length = 340

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 59  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 117 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 171 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 230

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 231 DYGGSAADLGK 241


>gi|209522097|ref|ZP_03270748.1| Polyprenyl synthetase [Burkholderia sp. H160]
 gi|209497469|gb|EDZ97673.1| Polyprenyl synthetase [Burkholderia sp. H160]
          Length = 330

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+ ++++ ++   L      +  Q ++ ++SA      GGK++R  L+   A
Sbjct: 12  ASLLAPISEDMQQVNRVIRQRLASDVM-LINQISEYIISA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGDTTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++          +R   +L+   NI  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILAEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A + GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAAQLGAVLAGADTKTEAAAAEYGRRIGTAFQIMDDWLDYTG 226


>gi|145629957|ref|ZP_01785739.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021]
 gi|145634043|ref|ZP_01789754.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA]
 gi|145636989|ref|ZP_01792653.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittHH]
 gi|145641936|ref|ZP_01797510.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae R3021]
 gi|148828062|ref|YP_001292815.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG]
 gi|229844760|ref|ZP_04464899.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1]
 gi|144984238|gb|EDJ91661.1| octaprenyl-diphosphate synthase [Haemophilus influenzae R3021]
 gi|145268487|gb|EDK08480.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittAA]
 gi|145269847|gb|EDK09786.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittHH]
 gi|145273415|gb|EDK13287.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae 22.4-21]
 gi|148719304|gb|ABR00432.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittGG]
 gi|229812474|gb|EEP48164.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 6P18H1]
          Length = 323

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214

Query: 229 DCEE 232
           D   
Sbjct: 215 DYSA 218


>gi|327396572|dbj|BAK13993.1| geranylgeranyl pyrophosphate synthetase CrtE [Pantoea ananatis
           AJ13355]
          Length = 302

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 12/232 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN-- 66
           ++    ID  LD LL            D + +A+R  AL  GK+IR  L+   A      
Sbjct: 17  EQLLADIDRRLDQLLPVEGER------DVVGAAMREGALAPGKRIRPMLLLLTARDLGCA 70

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           V+H   L +  A+E +H  SLI DD+P MD+  +RRG+PT+H  Y E  AI+A   LL+ 
Sbjct: 71  VSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSK 130

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMK 184
           AF +I+     L    +++ +  L++ IG+QG++ GQ  D    D+      + M    K
Sbjct: 131 AFGVIADAD-GLTPLAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFK 189

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T  L C + +  +I+A+AS   ++ L  F  +LG  FQL DDL D   D  K
Sbjct: 190 TSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGK 241


>gi|293366563|ref|ZP_06613240.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319332|gb|EFE59701.1| heptaprenyl diphosphate synthase [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 332

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71
           K+++  L++ ++ +   +Q      L S       GGK++R   V         N     
Sbjct: 24  KKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNNKPSED 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             RV  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL    + +
Sbjct: 77  TYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S        +  S+ ++ +            Q  D  +     T        KT  L+  
Sbjct: 135 SEISDTRVHSTISKSIVDVCRGE------LFQFQDQFNSNQTITNYLRRINRKTALLIQL 188

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + GAI ++AS +   +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 189 STQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 233


>gi|57866983|ref|YP_188615.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A]
 gi|282876098|ref|ZP_06284965.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis SK135]
 gi|57637641|gb|AAW54429.1| polyprenyl synthetase [Staphylococcus epidermidis RP62A]
 gi|281295123|gb|EFA87650.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis SK135]
 gi|329725457|gb|EGG61940.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis VCU144]
 gi|329735239|gb|EGG71531.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis VCU045]
 gi|329737300|gb|EGG73554.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis VCU028]
          Length = 319

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71
           K+++  L++ ++ +   +Q      L S       GGK++R   V         N     
Sbjct: 11  KKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNNKPSED 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             RV  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL    + +
Sbjct: 64  TYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S        +  S+ ++ +            Q  D  +     T        KT  L+  
Sbjct: 122 SEISDTRVHSTISKSIVDVCRGE------LFQFQDQFNSNQTITNYLRRINRKTALLIQL 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + GAI ++AS +   +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 176 STQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 220


>gi|27468075|ref|NP_764712.1| heptaprenyl diphosphate syntase component II [Staphylococcus
           epidermidis ATCC 12228]
 gi|27315620|gb|AAO04754.1|AE016747_251 heptaprenyl diphosphate syntase component II [Staphylococcus
           epidermidis ATCC 12228]
          Length = 339

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71
           K+++  L++ ++ +   +Q      L S       GGK++R   V         N     
Sbjct: 31  KKVEKRLEEAIISSDQTLQEASFHLLSS-------GGKRVRPAFVILSGQFGSNNKPSED 83

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             RV  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL    + +
Sbjct: 84  TYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHL 141

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S        +  S+ ++ +            Q  D  +     T        KT  L+  
Sbjct: 142 SEISDTRVHSTISKSIVDVCRGE------LFQFQDQFNSNQTITNYLRRINRKTALLIQL 195

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + GAI ++AS +   +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 196 STQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 240


>gi|169827495|ref|YP_001697653.1| heptaprenyl diphosphate synthase component II [Lysinibacillus
           sphaericus C3-41]
 gi|168991983|gb|ACA39523.1| Heptaprenyl diphosphate synthase component II [Lysinibacillus
           sphaericus C3-41]
          Length = 324

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S L+ +   I+  L++ +  ++S++    +  LL A      GGK+IR   V   A  
Sbjct: 9   LYSDLKSDIDIIERELENAV-DSSSYLINDASLHLLQA------GGKRIRPIFVLLGAKF 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      V   +E IH  SL+HDD+  +D+  +RRG+PTV  Q++   A+  G+ + 
Sbjct: 62  GEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKAQWNNRVAMYTGDFIF 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A E I+  +  L   I ++ M+ + +   +      Q+ D           F   K K
Sbjct: 120 ARALEYITKLEDPLVHQILARTMVEICNGEVI------QIEDKFRLDQGLKDYFRRIKRK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           T  L+  +CE GA+ A         L+ FG  +G+ FQ+ DD+LD      +L K
Sbjct: 174 TALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 228


>gi|316932581|ref|YP_004107563.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
 gi|315600295|gb|ADU42830.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
          Length = 336

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSASATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G  +A+  + E+   R FG N+GI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKAAK 234


>gi|145632254|ref|ZP_01787989.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655]
 gi|144987161|gb|EDJ93691.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 3655]
          Length = 323

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 95/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    ET    +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSETNYMRVIYSKTARLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVL 214

Query: 229 DCEE 232
           D   
Sbjct: 215 DYSA 218


>gi|68249468|ref|YP_248580.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP]
 gi|329122893|ref|ZP_08251464.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116]
 gi|68057667|gb|AAX87920.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 86-028NP]
 gi|327471824|gb|EGF17264.1| octaprenyl-diphosphate synthase [Haemophilus aegyptius ATCC 11116]
          Length = 329

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|260460355|ref|ZP_05808607.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034000|gb|EEW35259.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 338

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F  +    +++  A+E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAAQMFGYSGEGHVKLATAVEFMHTATLLHDDV--VDESGMRRGKKTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS   +I  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E + F + K KT AL   A E G ++A A++N++  LR +G NLG+ FQL DD L
Sbjct: 169 NLETTEDEHFAVIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDAL 228

Query: 229 DCEE---DLPK 236
           D      DL K
Sbjct: 229 DYGGTSKDLGK 239


>gi|319775186|ref|YP_004137674.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047]
 gi|317449777|emb|CBY85984.1| octaprenyl diphosphate synthase [Haemophilus influenzae F3047]
          Length = 329

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|302795999|ref|XP_002979762.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii]
 gi|300152522|gb|EFJ19164.1| hypothetical protein SELMODRAFT_177791 [Selaginella moellendorffii]
          Length = 415

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 25/246 (10%)

Query: 4   GLPSKLQENSKR----IDTILD------DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKK 52
           G+ S +Q   +R    ++ I++      D L Q    +    N  L+SA       GGK+
Sbjct: 77  GVASYVQRRERREKLSLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKR 136

Query: 53  IRSFLVTECASL------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           +R  +V   +         N  HL   R+    E IH  SLIHDD+  +D   +RRGK T
Sbjct: 137 MRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKET 194

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           VH  Y    A++AG+ +   +   +++        + SQ++               Q   
Sbjct: 195 VHQLYGTRIAVLAGDFMFAQSSWYLANLDNLEVIKLISQVIKDFASGEI------QQASS 248

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + D  I           KT +L+  +  S AI + A  +  +++  +G+ LG+ FQ+ DD
Sbjct: 249 LFDSDITLDNYLDKSYYKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDD 308

Query: 227 LLDCEE 232
           +LD  +
Sbjct: 309 ILDFTQ 314


>gi|121613596|ref|YP_001001287.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167006181|ref|ZP_02271939.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249601|gb|EAQ72560.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 281

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 35  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 95  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 153 CFFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 213 DDIIDVT 219


>gi|312795723|ref|YP_004028645.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
           pyrophosphate synthetase [Burkholderia rhizoxinica HKI
           454]
 gi|312167498|emb|CBW74501.1| Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (EC
           2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC
           2.5.1.29) [Burkholderia rhizoxinica HKI 454]
          Length = 298

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 11/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
                +++   R +  L  +L             +L  A+RYA+LGG K++R  L     
Sbjct: 7   AFDEWVRDVLARTEVALSAVLPPAD-----VEPMQLHQAMRYAVLGGGKRVRPMLCHAAG 61

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                          A+E IH YSL+HDDLPSMD+  +RRGKPTVH+QYDE T ++ G+ 
Sbjct: 62  QALGAPGQRLDAAACALELIHVYSLVHDDLPSMDDDDMRRGKPTVHVQYDEATGLLVGDA 121

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L + AF  ++S    L+ + ++ LM  L    G  GM GGQ +D+      +  TQ+  +
Sbjct: 122 LQSQAFIALASDA--LEAHRQAALMRELACASGSLGMAGGQAIDLASVGTRLSRTQLETM 179

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
            +MKTGAL+  A + GA+       + E  L  + + +G+ FQ+ DD+LD   D  
Sbjct: 180 HRMKTGALLRAAVKMGALCGDGLSADIEAGLDAYAKAVGLAFQVVDDILDVTADSA 235


>gi|317504363|ref|ZP_07962347.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606]
 gi|315664485|gb|EFV04168.1| octylprenyl diphosphate synthase [Prevotella salivae DSM 15606]
          Length = 325

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 12/226 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSFLVTECASLF 65
            L    + I   LDD +      +   H++ LL+   +     GGK++R  L+   A  F
Sbjct: 3   YLSLIKQPISAELDDFISLFNQSLS--HDNGLLAQVLMHIRQRGGKRMRPILILLMAKNF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                        +E +H  SL+HDD+  +D    RRG+ +V+  YD   +++ G+ +L+
Sbjct: 61  GCVSSVTQHAAVGLELLHTASLVHDDV--VDESSERRGQASVNALYDNKVSVLVGDFILS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +S   +++     S+L  +L+    L      Q+ +IQ E I ET  + I K KT
Sbjct: 119 TALLYVSKTHSEVIVRRLSELGRTLSDGEIL------QLTNIQKEAISETAYYEIIKRKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            AL       GA  A AS ++ E  R FG+NLGIIFQ+ DD+ D  
Sbjct: 173 AALFESCAAIGAESAGASDDDVEAARLFGQNLGIIFQIRDDIFDYY 218


>gi|254995376|ref|ZP_05277566.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Mississippi]
 gi|255004689|ref|ZP_05279490.1| octaprenyl-diphosphate synthase (ispB) [Anaplasma marginale str.
           Virginia]
          Length = 327

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 14/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRSFL 57
           M+      L +    +   L+DL       + T ++D    A       L GGK+IR  L
Sbjct: 1   MSDAFNRALIDLKSLV---LEDLQAMEQLIVDTSNSDISYIADIVSHLMLSGGKRIRPIL 57

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           +     +  +     +R+ AAIE IH  +L+HDD+  +D   +RRG  T +  +    +I
Sbjct: 58  LLAVCKMLALADERRIRIAAAIEFIHSATLLHDDV--VDQSELRRGAKTSNSLWGNKASI 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ LL  AF+ I S       N     +LS      + G +  QM+  ++  I   + 
Sbjct: 116 LVGDFLLAAAFQWIVSCG-----NFELLTVLSGASRTIVAGEI-QQMVYSKNLDITREKY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KT AL    CES  +++ +    +E LR FG N GI FQ+ DDLLD   
Sbjct: 170 IEIISAKTAALFSATCESAGVLSESPHGNREALRDFGHNFGITFQIVDDLLDYTA 224


>gi|94312038|ref|YP_585248.1| polyprenyl synthetase [Cupriavidus metallidurans CH34]
 gi|93355890|gb|ABF09979.1| octaprenyl diphosphate synthase [Cupriavidus metallidurans CH34]
          Length = 325

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L + +  + + +D ++   L      ++ Q  + ++ A      GGK++R  ++   A 
Sbjct: 8   ALLAPVAADMRAVDAVIRRRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLSAR 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F+        + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L
Sbjct: 61  AFDYEGHRHHELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFL 118

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++    +     +R   +LS   N+  +G +  Q+L++ D  +   +   + + 
Sbjct: 119 YSRAFQMMVEAGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPEVTVERYLQVIRY 172

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   + + GA++A A    +E    +G  +G  FQL DD+LD   
Sbjct: 173 KTAKLFEASAQLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDMLDYTA 221


>gi|237814874|ref|ZP_04593872.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella abortus str. 2308 A]
 gi|237789711|gb|EEP63921.1| farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Brucella abortus str. 2308 A]
          Length = 363

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A +F       +R+  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 82  GGKRLRPMMTLASARMFGYEGDGHVRLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 139

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+ + +I  +G +  Q+   +
Sbjct: 140 TIWGNQASVLVGDFLLGQAFKMMVDVGS-----LDALDVLATSASIIAEGEVM-QLAAAK 193

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + K KT AL   A E G I+A A ++++  LR +G NLG+ FQL DD L
Sbjct: 194 NMETTEDEYLAVIKAKTAALFSAAAEVGPIIAGAQRSDRAALRDYGLNLGLAFQLVDDAL 253

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 254 DYGGSAADLGK 264


>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
           chinensis]
          Length = 207

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 7/167 (4%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E IH  SLIHDDLP MDN   RRGKPT H  + E TA++AG+ LL++AFE I+   +
Sbjct: 1   CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60

Query: 137 QLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
           +   + R+  ++S     IG QG++GGQ++DI  E    +D   +  I   KT  L+  +
Sbjct: 61  KTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECS 120

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             SG I+  A+++E  R+R +   +G++FQ+ DD+LD     E+L K
Sbjct: 121 VVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGK 167


>gi|39934115|ref|NP_946391.1| farnesyltranstransferase [Rhodopseudomonas palustris CGA009]
 gi|192289642|ref|YP_001990247.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
 gi|39647963|emb|CAE26483.1| octaprenyl-diphosphate synthase [Rhodopseudomonas palustris CGA009]
 gi|192283391|gb|ACE99771.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 336

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSASATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G  +A+  + E+   R FG N+GI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPAIANRPKPEQSACRSFGMNIGIAFQLIDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKAAK 234


>gi|288563197|pdb|3LJI|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From
           Pseudomonas Fluorescens Pf-5
 gi|290560563|pdb|3LSN|A Chain A, Crystal Structure Of Putative Geranyltranstransferase From
           Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
          Length = 304

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 121/242 (50%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L +    +  R+D     L    +  +      RL  A RY++  GGK++R  L     
Sbjct: 2   SLTAYQASSQARVDAAXHTLFTAPSPELA-----RLYEAXRYSVXNGGKRVRPLLAYAAC 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    A     A+E IH YSL+HDDLP+ D+  +RRG+PT H  +DE  AI+AG+G
Sbjct: 57  EALGGKPEQANGAACAVELIHAYSLVHDDLPAXDDDDLRRGQPTTHKAFDEACAILAGDG 116

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L + AF  +  P  +     IR + + +L    G  G +GGQ +D+      +D+  +  
Sbjct: 117 LQSLAFSALLDPALSDASAEIRLRXVTTLAQAAGPAGXVGGQAIDLGSVGLKLDQQALEY 176

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
             + KTGAL+  +   GA+ +  A + E + L+ + + +G+ FQ+ DD+LD E D   L 
Sbjct: 177 XHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLG 236

Query: 236 KK 237
           K+
Sbjct: 237 KR 238


>gi|163749221|ref|ZP_02156471.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99]
 gi|161331291|gb|EDQ02180.1| octaprenyl-diphosphate synthase [Shewanella benthica KT99]
          Length = 323

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +   +  L++ A +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLSILAARAIDYQGVAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++   +     ++   ML+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELGS-----MKVLKMLADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +    +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTSEESYMRVIYCKTAKLFEAATRLAGVLADSPIEIQTALADYGKYLGTAFQLTDDLL 214

Query: 229 DC---EEDLPK 236
           D     E+L K
Sbjct: 215 DYTANTEELGK 225


>gi|119356815|ref|YP_911459.1| trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM
           266]
 gi|119354164|gb|ABL65035.1| Trans-hexaprenyltranstransferase [Chlorobium phaeobacteroides DSM
           266]
          Length = 324

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 9/216 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++  +    +    N  +    RY L   GK+IR  LV   A +    + +  R    +E
Sbjct: 15  EIFQERYKSVLHSKNTLVDKVTRYVLKQQGKQIRPALVLLSAKMCGGVNDSTYRSAIMVE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +LIHDD+  +D   +RRG  +++  +    +++ G+ LL+         K     
Sbjct: 75  LLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLYSLENKDYFSL 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           +I S+ +  ++    L      Q+   +   I E     +   KT +L+  +C  GA  A
Sbjct: 133 HIVSEAVRRMSEGEIL------QIQKTRSLDISEEDYLSVISDKTASLIASSCAMGAASA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +    +++ +GE LG+ FQ+ DDLLD   D  K
Sbjct: 187 TEDEAAIAKMKNYGEYLGLAFQIRDDLLDYTGDSNK 222


>gi|42520637|ref|NP_966552.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42410376|gb|AAS14486.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 328

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 10/218 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           + ++D + +  +    +    ++S       GGKKIR  LV     + N +    + V A
Sbjct: 21  SAMNDFVFKNVNDEDAKLATDIIS--HLVRSGGKKIRPKLVFIICKMLNYSGENRINVAA 78

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           ++E IH  +L+HDD+  +D    R G  T +  +   ++I+ G+ LLT AF  +      
Sbjct: 79  SVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECG-- 134

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
              N+    +LS   ++ ++G +  QM    D        F I   KT +L    CE+ +
Sbjct: 135 ---NLNILSILSKASHLLVKGEIK-QMTARFDPHTVRENYFDIIGEKTASLFSACCEAAS 190

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            ++ A+ +E ERL+ FG N G+ FQ+ DD+LD   +  
Sbjct: 191 TVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQG 228


>gi|86152300|ref|ZP_01070511.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85840789|gb|EAQ58040.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 281

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 35  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 95  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 153 CFFEDKKLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 213 DDIIDVT 219


>gi|295696360|ref|YP_003589598.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912]
 gi|295411962|gb|ADG06454.1| Trans-hexaprenyltranstransferase [Bacillus tusciae DSM 2912]
          Length = 327

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 18/234 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L   ++   +R++ +L++ +      +Q         A  Y L  GGK++R  +V    
Sbjct: 5   ELYGAMRGELRRVEDLLEEEVASREPALQ--------EASLYLLRAGGKRLRPLVVLVSG 56

Query: 63  SLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +    +R  AA+E IH  +L+HDD+  +D    RRG+PTV   + +  A+  G+
Sbjct: 57  RFGPRRDTEALVRAAAALEMIHMATLVHDDV--IDRSDTRRGRPTVKAAWGDQLALYTGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   A E++S       ++ R   + +       QG L  QM D+        + +   
Sbjct: 115 FLFARALELLSEM-----EDRRLHEVTAWAIARMCQGELE-QMHDLYRIDQPLFRYYRRI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + KT  LM  +C  GA  A A +     L  FG +LG+ FQ+ DD+LD   D  
Sbjct: 169 RQKTALLMAVSCLVGARAAEADEETARALWRFGGHLGMAFQIVDDVLDLVGDEA 222


>gi|126653362|ref|ZP_01725466.1| HepT [Bacillus sp. B14905]
 gi|126589878|gb|EAZ84009.1| HepT [Bacillus sp. B14905]
          Length = 321

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S L+ +   I+  L++ +  ++S++    +  LL A      GGK+IR   V   A  
Sbjct: 6   LYSDLKSDIDIIERELENAV-DSSSYLINDASLHLLQA------GGKRIRPIFVLLGAKF 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      V   +E IH  SL+HDD+  +D+  +RRG+PTV  Q++   A+  G+ + 
Sbjct: 59  GEYDIEKMKDVAVPLELIHMASLVHDDV--IDDSNMRRGRPTVKAQWNNRVAMYTGDFIF 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A E I+  +  L   I ++ M+ + +   +      Q+ D           F   K K
Sbjct: 117 ARALEYITKIEDPLVHQILARTMVEICNGEVI------QIEDKFRLDQGLKDYFRRIKRK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           T  L+  +CE GA+ A         L+ FG  +G+ FQ+ DD+LD      +L K
Sbjct: 171 TALLISSSCELGAVAAGVDAKTVRHLKRFGYFVGMSFQIIDDVLDIMATDKELGK 225


>gi|239907069|ref|YP_002953810.1| geranyltranstransferase [Desulfovibrio magneticus RS-1]
 gi|239796935|dbj|BAH75924.1| geranyltranstransferase [Desulfovibrio magneticus RS-1]
          Length = 299

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 124/235 (52%), Gaps = 6/235 (2%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           +  +L   +  ++  L +     A   +    + LL+A+ Y+LL GGK++R  L    A 
Sbjct: 3   VKERLAVMAGEVEVYLRERF--GARMRERGVPENLLAAMEYSLLAGGKRLRPVLCLVFAE 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF+ +    +   A  E IH YSLIHDDLP+MD+  +RRG+P+ H  + E  AI+AG+ L
Sbjct: 61  LFDADRARVMPFAAGFEIIHTYSLIHDDLPAMDDDDLRRGRPSNHKVFGEAGAILAGDAL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMI 180
           LT AF  +      +   +    +       G  GM+GGQ+LD+     E +   ++  +
Sbjct: 121 LTEAFGCMGRVWPGVAAELVLPALAEAAKAAGAAGMVGGQVLDMDYTAREGVTLAELARM 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q +KTGAL+  +C  GAI+A A +    R R +GE +G  FQ+ DD+LD   D  
Sbjct: 181 QALKTGALLTASCVCGAILAGAGEEGVARAREYGEAVGAAFQIVDDILDEIGDAA 235


>gi|58696807|ref|ZP_00372336.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225630516|ref|YP_002727307.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi]
 gi|58536990|gb|EAL60142.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592497|gb|ACN95516.1| octaprenyl-diphosphate synthase [Wolbachia sp. wRi]
          Length = 325

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 10/218 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           + ++D + +  +    +    ++S       GGKKIR  LV     + N +    + V A
Sbjct: 18  SAMNDFVFKNVNDEDAKLATDIIS--HLVRSGGKKIRPKLVFIICKMLNYSGENRINVAA 75

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           ++E IH  +L+HDD+  +D    R G  T +  +   ++I+ G+ LLT AF  +      
Sbjct: 76  SVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECG-- 131

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
              N+    +LS   ++ ++G +  QM    D        F I   KT +L    CE+ +
Sbjct: 132 ---NLNILSILSKASHLLVKGEIK-QMTARFDPHTVRENYFDIIGEKTASLFSACCEAAS 187

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            ++ A+ +E ERL+ FG N G+ FQ+ DD+LD   +  
Sbjct: 188 TVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQG 225


>gi|302038674|ref|YP_003798996.1| polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii]
 gi|300606738|emb|CBK43071.1| Polyprenyl-diphosphate synthase [Candidatus Nitrospira defluvii]
          Length = 334

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 15/223 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           +E  + ++  +   L  + + + T     L S       GGK++R   V   A L     
Sbjct: 21  REELEGVEEQIRKNLDSSVALVNTVAAHILNS-------GGKRVRPLFVLLSAHLCGYAG 73

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                +G+ +E IH  +L+HDD+  +D   +RRG+ T    +    +I+ G+ L + A  
Sbjct: 74  QDHQALGSLVEFIHTATLLHDDV--VDEADLRRGRRTASKVWGNQISILVGDYLYSRAIC 131

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            I   + Q  +   S+    +     L      Q+    +  + E++   I + KT  L+
Sbjct: 132 QIVDFRNQGINEALSEACRKMAEGEVL------QLYYNGNPLMPESEYLRIIEHKTAGLI 185

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +C+ GAI+  A++  +E L  FG+ LGI FQLADD LD   
Sbjct: 186 AASCKIGAIVGGATEELQEALFRFGQRLGIAFQLADDTLDYTA 228


>gi|260220330|emb|CBA27759.1| hypothetical protein Csp_A03890 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 524

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L+  C             + A +E IH  +L+HDD+  +D+  +RRG PT 
Sbjct: 47  AGGKRLRPALLLLCCGALGYKGEQRFNMAAVVEFIHTATLLHDDV--VDDSDLRRGAPTA 104

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + ++    +++ G+ L + AF+++   ++     +R   +L+   NI  +G +  Q++++
Sbjct: 105 NARFGNPASVLVGDFLYSRAFQMMVDAQS-----MRIMQVLADATNIISEGEVM-QLMNM 158

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  +DE     + + KT  L   +   GAI++ AS+  +E    FG+ +G  FQ+ DD+
Sbjct: 159 HNAALDEAGYLQVIRSKTAKLFEASARVGAILSQASETHEEACAEFGQAMGTAFQVIDDV 218

Query: 228 LDCEED 233
           LD   D
Sbjct: 219 LDYAGD 224


>gi|257465194|ref|ZP_05629565.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202]
 gi|257450854|gb|EEV24897.1| octaprenyl-diphosphate synthase [Actinobacillus minor 202]
          Length = 327

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLITVLAARALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      D++    ++S   N   +G +  Q++++ 
Sbjct: 105 AAFGNAASVLVGDYIYTRSFQMMTS-----VDSLEVLKVMSAATNALAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A+AS+  +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEENYMRVIYNKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
          Length = 214

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 8/140 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               S + E + R++  LDD        +  +   ++  A+RY+LL GGK++R  L    
Sbjct: 79  FNFKSYMIEKATRVNKALDD-------AVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAA 131

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+
Sbjct: 132 CELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 191

Query: 122 GLLTYAFEIISSPKTQLKDN 141
            LL +AFE I+     +   
Sbjct: 192 ALLAFAFEHIAVSTVDVSPR 211


>gi|300727537|ref|ZP_07060928.1| polyprenyl synthetase [Prevotella bryantii B14]
 gi|299775240|gb|EFI71841.1| polyprenyl synthetase [Prevotella bryantii B14]
          Length = 325

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 12/214 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           LDD +      +   H D LLS +   +    GK++R  L+   A  F      +L    
Sbjct: 15  LDDFVALFNQSLS--HTDGLLSQVLDHIKQRAGKRMRPMLILLMAKNFGKVSDVSLNAAV 72

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++ G+ LL+ A   +S   ++
Sbjct: 73  GLELLHTASLVHDDV--VDESDERRGQASVNASYNNKVAVLVGDYLLSTALLYVSYTHSE 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
           +     S+L  +L++   L      Q+ +IQ+  I E   + +  MKT AL       GA
Sbjct: 131 VIVRYLSELGRTLSNGEIL------QLSNIQNRTISEDAYYDVISMKTAALFEACAVIGA 184

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             A AS  +    R FG+ LG+IFQ+ DD+ D  
Sbjct: 185 ESAGASHEDTMAAREFGKKLGLIFQIRDDIFDYY 218


>gi|167465350|ref|ZP_02330439.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 253

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + S+ +++   I+  L+  +      ++        +++ Y   GGK+IR   V     
Sbjct: 5   DIYSRKKKDIAFIEKSLERSIDVDLPTLRD-------ASLLYLKAGGKRIRPVFVLLAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             + +      +   +E IH  SL+HDD+  +D+   RRGK TV  ++D   A+  G+ +
Sbjct: 58  FGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAETRRGKATVRSKWDNRIAMYTGDYV 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A  +++  K      I S+ M+ ++           Q+    +            K 
Sbjct: 116 YAKALTLVTELKNPAIHQIMSKAMIEMSIGE------MEQIRLFFEHGQTLRDYLRRIKR 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L+  +C+ GA+ A AS+N  +RL  FG  +G+ FQ+ DD+LD   
Sbjct: 170 KTALLIAVSCQLGAMTAEASENYAKRLFHFGYYVGMAFQIRDDILDLVG 218


>gi|77361572|ref|YP_341147.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76876483|emb|CAI87705.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 323

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 12/227 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFN 66
           ++     I+  ++D+      H Q + +  L++ +  Y +  GGK++R  L    A    
Sbjct: 3   IKAIQALIENDMNDV--NQLIHAQMRSDVALVNQLGLYIVNSGGKRVRPMLAILAARALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + +   +E IH  +L+HDD+  +D   +RRG PT + ++    +++ G+ + T 
Sbjct: 61  YQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F+++          ++   +L+   NI  +G +  Q+++  D    E     +   KT 
Sbjct: 119 SFQLMVGLG-----KMQVMQVLADATNIIAEGEVL-QLMNCNDPDTTEASYMQVIYSKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A    AI+   +Q   + L  +G +LG  FQL DD+LD   D
Sbjct: 173 KLFEAATGLAAIITEQNQATLDALNLYGMHLGTAFQLVDDVLDYNAD 219


>gi|256811061|ref|YP_003128430.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86]
 gi|256794261|gb|ACV24930.1| Polyprenyl synthetase [Methanocaldococcus fervens AG86]
          Length = 317

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 19/230 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           +   ++ID  L   + +         +D+L +A ++ L  GGK+IR +L      L   +
Sbjct: 5   KNILQKIDEELKTYVDK---------DDKLYNASKHLLFAGGKRIRPYLAVVTYMLKKDD 55

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L   AA+E IH Y+LI      MD+   RRGKPTVH+ + E  AI+AG+ L   AF
Sbjct: 56  IEEVLPAAAAVELIHNYTLI--HDDIMDHDDERRGKPTVHVVFGEPMAILAGDLLYAKAF 113

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
           E +S     +KDN ++  +L +     +  +  GQ +D++ E  +    +   + + KTG
Sbjct: 114 EAVSK----IKDNKKAHEVLKILSKACV-EVCEGQAMDMEFENYYPTMDEYLEMIRKKTG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AL+  + E GA+MA  ++ E+  L+ + + +G+ FQ+ DD+LD   D  K
Sbjct: 169 ALLEASVEIGAVMADCNEEERNALKEYAKRIGLTFQIQDDVLDLIGDEKK 218


>gi|304311022|ref|YP_003810620.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
 gi|301796755|emb|CBL44967.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
          Length = 322

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 15/218 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +D I+   +    + +QT   D ++SA      GGK++R  LV         +      +
Sbjct: 17  VDEIIRQQIQSKVALVQTIG-DYIISA------GGKRLRPLLVLLGGRAVGYHKEDLRIL 69

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE +H  +L+HDD+  +D   +RRG+ T + Q+    +++ G+ L + +FE++    
Sbjct: 70  AATIELLHTATLLHDDV--VDKSGLRRGRATANAQWGNAPSVLVGDYLYSRSFEMMVGLG 127

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                N+    +LS    I  +G    Q+  ++D    E     I + KT  L+  +  S
Sbjct: 128 -----NMPVMKILSQATRIMAEGEAL-QLSRVRDVSTSEETYMQIIRSKTSVLLEASSHS 181

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A++A A+  E+  LR FGE+LGI FQL DD+LD   D
Sbjct: 182 AAVLASATDYERHALRGFGEHLGIAFQLIDDVLDFRGD 219


>gi|229495533|ref|ZP_04389266.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229317516|gb|EEN83416.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 334

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 16/233 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
           + +Q+N   I+T L  L+    +H +TQ ++ L + + YA  GG K++R  LV   A ++
Sbjct: 7   TTIQDNLSYIETELQTLV----AHCRTQISEPLYAPMAYAFEGGGKRVRPLLVLMVADMY 62

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +    ++   A+E  H ++L+HDD+  MD+  +RR +P+V  Q+    AI+ G+ +L+
Sbjct: 63  GKDRADFIKAALALEIYHNFTLLHDDV--MDHSEMRRNRPSVPAQFGIAQAILTGDAMLS 120

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182
            A+++       L+  I          N   Q ++ GQ +D+  E    +   +   + +
Sbjct: 121 LAYKLTQEYPLALQPAI------MGVFNRMSQDIMVGQQMDMDFETRSDVTLAEYERMIR 174

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT  L+  A E GA +A     ++  L   G N G+ FQL DD LD   D  
Sbjct: 175 KKTAVLLSAALEIGAYIADTGMRDRSYLIRAGINAGMAFQLRDDYLDVYGDEA 227


>gi|332531718|ref|ZP_08407603.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038694|gb|EGI75136.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
           geranyltranstransferase (farnesyldiphosphate synthase) /
           geranylgeranyl pyrophosphate synthetase
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 323

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 12/230 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFN 66
           ++     I++ ++D+      H Q + +  L++ +  Y +  GGK++R  L    A    
Sbjct: 3   IKAIQALIESDMNDV--NQLIHAQMRSDVALVNQLGLYIVSSGGKRVRPMLAILAAKALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + +   +E IH  +L+HDD+  +D   +RRG PT + ++    +++ G+ + T 
Sbjct: 61  YQGKDHITLATIVEFIHTATLLHDDV--VDESNLRRGTPTANAEFGNAASVLVGDFIYTR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F+++          ++   +L+   NI  +G +  Q+++  D    E     +   KT 
Sbjct: 119 SFQLMVGLG-----KMQIMQVLADATNIIAEGEVL-QLMNCNDPDTTEASYMQVIYSKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L   A    AI+    Q   + L  +G +LG  FQL DD+LD   D  +
Sbjct: 173 KLFEAATGLAAIITEQDQATLDALNLYGMHLGTAFQLVDDVLDYNADAEQ 222


>gi|332799448|ref|YP_004460947.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1]
 gi|332697183|gb|AEE91640.1| Trans-hexaprenyltranstransferase [Tepidanaerobacter sp. Re1]
          Length = 326

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 8/194 (4%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +     GGK++R  ++   A     +      +  ++E IH  ++IHDD+  +D+  IRR
Sbjct: 41  MNMISSGGKRLRPAMLLAAARFGEYDFEIVRPLALSVELIHTATIIHDDI--VDDSPIRR 98

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  ++  Q  +  A+ AG+ +    FEI+++              +S   +   +G L  
Sbjct: 99  GVLSIQSQLGKDVAVYAGDYIFCKVFEILAASTYS-----NILEQVSKAMSQICEGELK- 152

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q  D+ D  +         + KT  L   + + GA ++ A     + L  +G N+G+ FQ
Sbjct: 153 QREDLFDTDLTFKDYLYRIQKKTAILFALSAQMGADVSKAPDKIIKALYSYGINIGMAFQ 212

Query: 223 LADDLLDCEEDLPK 236
           + DDLLD   D  K
Sbjct: 213 IIDDLLDFTGDYKK 226


>gi|270159180|ref|ZP_06187836.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968]
 gi|289165992|ref|YP_003456130.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150]
 gi|269987519|gb|EEZ93774.1| solanesyl diphosphate synthase [Legionella longbeachae D-4968]
 gi|288859165|emb|CBJ13094.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae
           NSW150]
          Length = 322

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 10/199 (5%)

Query: 39  LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L+  + + ++  GGK++R  LV   ++         + + A +E  H  +L+HDD+  +D
Sbjct: 31  LIDKMSHHMIESGGKRLRPLLVLLTSNACGYQGQDHIDLAAMVEFFHTATLLHDDV--ID 88

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              +RRG+ T +  +    +I+ G+ L T + E++          + ++  L ++     
Sbjct: 89  ESTLRRGRQTANNIWGSKASILVGDYLFTQSIELMVDINNPEVLKLFARTALEIS----- 143

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            G +  Q+ +  +  +   + F + + KT  L   A   G I++++S+  +  L  +G +
Sbjct: 144 CGEVK-QLTNRHNPALTFEEYFDVIRAKTALLFAAAACIGPILSNSSKEMQNALYAYGLH 202

Query: 217 LGIIFQLADDLLDCEEDLP 235
           LG  FQL DD LD   D  
Sbjct: 203 LGNAFQLIDDALDYCSDAK 221


>gi|186682243|ref|YP_001865439.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
 gi|186464695|gb|ACC80496.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
          Length = 323

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  LL      +    +  L +A  +    GGK+IR  +V   +    +       
Sbjct: 11  VEADL-RLLADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLEQDITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  +    AI+AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESDVRRGVPTVHSLFGNRIAILAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q L+  D  I           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSEVIMDLATGEI------QQGLNRFDAGISIETYLQKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  S+   E L  +G + GI FQ+ DD+LD   
Sbjct: 182 SSKAAGLLSEVSRETVEHLYSYGRHFGIAFQIVDDILDFTS 222


>gi|242242749|ref|ZP_04797194.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
           W23144]
 gi|242233885|gb|EES36197.1| trans-hexaprenyltranstransferase [Staphylococcus epidermidis
           W23144]
          Length = 332

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71
           K+++  L++ ++ +   +Q      L S       GGK++R   V         N     
Sbjct: 24  KKVEKRLEEAIISSDQTLQDASFHLLSS-------GGKRVRPAFVILSGQFGSNNKPSED 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             RV  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL    + +
Sbjct: 77  TYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKYL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S           S+ ++ +            Q  D  +     T        KT  L+  
Sbjct: 135 SEISDTRVHTTISKSIVDVCRGE------LFQFQDQFNSNQTITNYLRRINRKTALLIQL 188

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + GAI ++AS +   +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 189 STQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 233


>gi|186472776|ref|YP_001860118.1| polyprenyl synthetase [Burkholderia phymatum STM815]
 gi|184195108|gb|ACC73072.1| Polyprenyl synthetase [Burkholderia phymatum STM815]
          Length = 291

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 117/235 (49%), Gaps = 15/235 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           ++    R++  L+  L       ++    RL  A+RYA+LGG K++R  L      L   
Sbjct: 1   MRSVLDRVERALEQYLP-----AESIEPARLHEAMRYAVLGGGKRVRPLLCHAAGELAGA 55

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YDE TA++ G+ L + A
Sbjct: 56  KAECLDAASAALEMIHVYSLVHDDMPCMDDDDLRRGKPTVHVKYDEATALLVGDALQSQA 115

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
           F  ++S         ++ L+  L    G  GM GGQ +D+      +   Q+  + ++KT
Sbjct: 116 FVALTSD--VFSPAQQAALVRELALASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKT 173

Query: 186 GALMCFACESGAIM-----AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A   GA+              + L  +   +G+ FQ+ DD+LD   D  
Sbjct: 174 GALLRAAVRMGALTGQVDNGGPDAKALQALDAYSAAVGLAFQVVDDILDVTTDSA 228


>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 48/233 (20%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           E +K ++  LD       + +  +    +  A+RY+LL GGK+I   +      L     
Sbjct: 3   EKAKSVNQALD-------TAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQE 55

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            TA+ V  A+E +H  SL+ DDLP MDN  IRRGKP+ H  + E                
Sbjct: 56  STAMPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGES--------------- 100

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186
                               L  +IG QG++ GQ LD+  E   E     +  I   K G
Sbjct: 101 -------------------ELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAG 141

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            L+  +   GA++   S  + E LR FG  +G+++Q+ DD+LD     ++L K
Sbjct: 142 PLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGK 194


>gi|153952306|ref|YP_001398921.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939752|gb|ABS44493.1| geranyltranstransferase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 281

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 35  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 95  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 152

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 153 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 212

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 213 DDIIDVT 219


>gi|1813470|gb|AAB41847.1| spore germination protein C3 [Bacillus firmus]
          Length = 288

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 10/226 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL +   +  + +  +  +  + +Q +H D L +A  + L  GGK+IR   V   A    
Sbjct: 9   KLADIYMQFQSDITIIEQELEASVQARH-DVLKNASTHLLKAGGKRIRPVFVLLAAKFGT 67

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +      +   +E +H  SL+HDD+  +D+  +RRGK TV  Q+D   A+  GN +   
Sbjct: 68  YDIHVLKNIAVPLELVHMASLVHDDV--IDDAELRRGKRTVKSQWDNKVAMYTGNYIFAK 125

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A E      +   D+ R   +LS T      G +  Q+ D  +   +        K KT 
Sbjct: 126 AVE-----ASAYFDHPRVHQVLSNTLVEMCIGEVE-QIRDQYNWGQNLRVYLRRIKRKTA 179

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L+  +CE GA+ A A    ++ L  FG N+G+ FQ+ DD+LD   
Sbjct: 180 LLIAVSCELGALAADADPVIQKHLYNFGYNVGMSFQITDDILDFVG 225


>gi|327469005|gb|EGF14477.1| geranyltranstransferase [Streptococcus sanguinis SK330]
          Length = 291

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 76/230 (33%), Positives = 120/230 (52%), Gaps = 12/230 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EQLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L+ +   +  ++A A Q  +++LR  GE LG+ FQ+ DD+LD      K
Sbjct: 177 KLLTYPFVAAGLIAEAEQPVQDKLRRIGELLGLAFQVRDDILDVTASFEK 226


>gi|302807465|ref|XP_002985427.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii]
 gi|300146890|gb|EFJ13557.1| hypothetical protein SELMODRAFT_446259 [Selaginella moellendorffii]
          Length = 415

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 25/246 (10%)

Query: 4   GLPSKLQENSKR----IDTILD------DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKK 52
           G+ S +Q   +R    ++ I++      D L Q    +    N  L+SA       GGK+
Sbjct: 77  GVASYVQRRERREKLSLNEIIEPVSSDLDALNQNLQSIVGVQNPLLMSAAEQIFGAGGKR 136

Query: 53  IRSFLVTECASL------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           +R  +V   +         N  HL   R+    E IH  SLIHDD+  +D   +RRGK T
Sbjct: 137 MRPAIVFLVSRATMQLARLNTIHLQHRRLAEITEMIHTASLIHDDV--LDESDVRRGKET 194

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           VH  Y    A++AG+ +   +   +++        + SQ++               Q   
Sbjct: 195 VHQLYGTRIAVLAGDFMFAQSSWYLANLDNLEVIKLISQVIKDFASGEI------QQASS 248

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           + D  I           KT +L+  +  S AI + A  +  +++  +G+ LG+ FQ+ DD
Sbjct: 249 LFDSEITLDNYLDKSYYKTASLIAASTRSAAIFSGADPSVCDKMFDYGKYLGLAFQIVDD 308

Query: 227 LLDCEE 232
           +LD  +
Sbjct: 309 ILDFTQ 314


>gi|92118681|ref|YP_578410.1| farnesyltranstransferase [Nitrobacter hamburgensis X14]
 gi|91801575|gb|ABE63950.1| Farnesyltranstransferase [Nitrobacter hamburgensis X14]
          Length = 336

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   +    +++ A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAHLAGYSGEGHIKLAASVEFMHTATLLHDDV--VDESELRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAAATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G ++    + E+     FG NLGI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPVLGGRPKAEEMAAASFGMNLGIAFQLVDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKSAK 234


>gi|17227592|ref|NP_484140.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120]
 gi|17135074|dbj|BAB77620.1| solanesyl diphosphate synthase [Nostoc sp. PCC 7120]
          Length = 323

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF---NVNHLT 71
           ++  L  +L      +    +  L +A  +    GGK+IR  +V   +            
Sbjct: 11  VEADL-RILADNLKQLVGNRHPILFAAAEHLFGAGGKRIRPAIVLLISRATMLDQGITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  +    AI+AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESEVRRGVPTVHSLFGNRIAILAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q L+  D  I           KT +L+  
Sbjct: 128 ANLDNLQVVKLLSEVIMDLATGEI------QQGLNRFDASISIETYIEKSYYKTASLVAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  S    E L  +G +LGI FQ+ DD+LD   
Sbjct: 182 SSKAAGLLSEVSPETAEHLYAYGRHLGIAFQIVDDILDFTS 222


>gi|283953738|ref|ZP_06371269.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794779|gb|EFC33517.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni 414]
          Length = 279

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+              AL    A+E IH YSLIHDDLPSMDN   RRG PT
Sbjct: 33  AGGKHFRAQLLLSVVQSNKPELINQALDAALALEFIHTYSLIHDDLPSMDNADFRRGIPT 92

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 93  LHKSYDETTAILVGDALNTEAFLVLSHAN--LKDEIKIKLIKTLAFNAGLNGMVIGQAID 150

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   S  E  ++   G  LG+IFQ+ 
Sbjct: 151 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICQLSNEESNQIYKLGLKLGLIFQIN 210

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 211 DDIIDTT 217


>gi|254495951|ref|ZP_05108859.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii
           LLAP12]
 gi|254354829|gb|EET13456.1| octaprenyl diphosphate synthase IspB [Legionella drancourtii
           LLAP12]
          Length = 322

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 101/221 (45%), Gaps = 11/221 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALR 74
            ++DD     A  +    +   L+  + + ++  GGK++R  LV   ++  +      + 
Sbjct: 9   AVIDDFNAVNALIVNKIESQIGLIDDMSHHVIESGGKRLRPLLVLLASNACSYQGNAHIA 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A +E  H  +L+HDD+  +D   +RRG+ T +  +    +I+ G+ L T + E++   
Sbjct: 69  LAAMVEFFHTATLLHDDV--VDESTLRRGRETANNIWGSKASILVGDYLFTQSIELMVDS 126

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  + +   L ++      G +  Q+ +  +  +   + F + + KT  L   A  
Sbjct: 127 GNPAILKLFANTALEIS-----CGEVK-QLSNRHNPALTFEEYFDVIRAKTALLFAAAAC 180

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            G +++ AS+  ++ L  +G +LG  FQL DD LD   D  
Sbjct: 181 IGPMLSDASKEVQDSLYAYGLHLGNAFQLIDDALDYCSDAK 221


>gi|218781076|ref|YP_002432394.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218762460|gb|ACL04926.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 325

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 10/225 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE  + ++  L D+     +++   + D +     + L  GGK++R  L+   A +   N
Sbjct: 5   QEIFEFVEKDLADIERALEANLNP-YLDLVRDVASHLLFAGGKRLRPVLMVLSARVCGCN 63

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +   + +    E +H  +L+HDD+  +D    RRGK   H  +D    ++ G+ LL+   
Sbjct: 64  NGEEINLSTVFEYLHAATLLHDDI--VDGAETRRGKIAAHKVWDPAEVVLTGDFLLSRTC 121

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            I +       D +    +++    +  +G +  Q+L+ +   + E Q   +   KT  L
Sbjct: 122 TIAADT-----DKLPIIKVITNVTGVMSEGEI-QQLLNKKRLDLSEEQYMDVIYRKTAVL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  ACE GA++A A   + E L+ +G +LGI FQ+ADDLLD   D
Sbjct: 176 ISAACEVGALLADAPPEQVEALKEYGRHLGIAFQMADDLLDYVAD 220


>gi|110835026|ref|YP_693885.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
           SK2]
 gi|110648137|emb|CAL17613.1| geranylgeranyl pyrophosphate synthetase [Alcanivorax borkumensis
           SK2]
          Length = 302

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 82/234 (35%), Positives = 118/234 (50%), Gaps = 11/234 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
             L         R++  LD  L   ++        RL  A+RYA L GGK+IR  LV   
Sbjct: 10  AALNQLTDTAKARLEQALDHYLPAHSA------ASRLSHAMRYAALSGGKRIRPLLVYGA 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L       A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+AG+
Sbjct: 64  AQLAGAPLAKADVPAVAVELIHAYSLVHDDLPAMDDDDLRRGQPTCHKAFDEATAILAGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFM 179
            L T AFE+++      +D  R  L+  L    G+ GM  GQM D+  Q +      +  
Sbjct: 124 TLHTRAFELLACHG-DYRDGSRISLIQHLCQAAGVDGMAAGQMQDMLAQGQQQTVAALEE 182

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +KTG L+  + + G  +A     +    L  FG+ +G+ FQ+ DD+LD   
Sbjct: 183 MHYLKTGRLITASLQLGYFVAEKDDPSLLANLTEFGDAIGLAFQIQDDILDVTA 236


>gi|127511802|ref|YP_001092999.1| trans-hexaprenyltranstransferase [Shewanella loihica PV-4]
 gi|126637097|gb|ABO22740.1| Trans-hexaprenyltranstransferase [Shewanella loihica PV-4]
          Length = 323

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          L++ A +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRMRPLLSILAARAIAYEGEAHLKLAAIVEFIHTASLLHDDV--VDESMLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++  K+     +    +L+   N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTELKS-----MEVLEVLADATNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A     ++A +S   +  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTSEESYMRVIYCKTAKLFEAATRLAGVLAESSIEVQTALADYGKYLGTAFQLTDDLL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYTADTE 221


>gi|332295830|ref|YP_004437753.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178933|gb|AEE14622.1| Polyprenyl synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 276

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 11/223 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
            Q+    I+ ++ + L +  S       D+    I Y++L GGK+IR   +    S  N 
Sbjct: 2   FQKQIDYINNVISNFLAKLESI-----PDKTKELIIYSVLSGGKRIRPIFLINVVSESNY 56

Query: 68  NHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           + +  L+    A+E +HC SLIHDDLP++DN   RRGK T+H +Y E  AI+AG+ L   
Sbjct: 57  DTMLGLKEAILALELMHCASLIHDDLPAIDNDDFRRGKLTLHKKYGEGPAILAGDALQIM 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
            F I+S+ +     N+  +L+  L+   G++GM+GGQ+LDI +   +  Q++ I  +KTG
Sbjct: 117 PFNILSNIE---DTNLAVKLIKILSDKAGVKGMIGGQILDISN-IENFEQIYNIMALKTG 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           AL   +   G ++      + + L   G+++G++FQ+ DD  D
Sbjct: 173 ALFEASLMMGGVVGRLEDKQIKNLEEIGKSIGLLFQILDDEKD 215


>gi|119719519|ref|YP_920014.1| geranyltranstransferase [Thermofilum pendens Hrk 5]
 gi|119524639|gb|ABL78011.1| Geranyltranstransferase [Thermofilum pendens Hrk 5]
          Length = 337

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 18/245 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+  +  +L E    +D +++  LL+ AS            A+ Y + +GGK++R  L  
Sbjct: 1   MSARVLERLGEIGALVDPVMEKYLLRGAS-------PEFQDAVLYQVRMGGKRVRPALTI 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                       AL   AA+E  H YSLI DD+  +D+  +RRGKPTV  +Y   TAI+ 
Sbjct: 54  ASTLAVGGKEENALPAAAAVELAHNYSLILDDI--IDHSELRRGKPTVWKKYGISTAILI 111

Query: 120 GNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGG-------QMLDIQDEF 171
                    E ++  P+  +   I ++ +  LT    L  +           +++ +   
Sbjct: 112 AVHYRESITEALNDTPEPPVFHAIMAETIKLLTDGERLDILFEQSGRSDEPYVVEQRYRA 171

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +       + + KT  L+  +C  GA+ A       E LR +G NLG+ FQ+ DD++D  
Sbjct: 172 VRLDDYLRMIERKTAKLIETSCVFGALSAGQRGEILEALREYGYNLGMAFQVGDDIIDIF 231

Query: 232 EDLPK 236
            +  K
Sbjct: 232 GEEEK 236


>gi|260425613|ref|ZP_05779593.1| geranyltranstransferase [Citreicella sp. SE45]
 gi|260423553|gb|EEX16803.1| geranyltranstransferase [Citreicella sp. SE45]
          Length = 289

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 85/202 (42%), Positives = 120/202 (59%), Gaps = 7/202 (3%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
            +  A+RYA +GGK +R +LV E A L  V    AL    AIE IH YSL+HDDLP MD+
Sbjct: 28  PVTEAMRYATVGGKGLRGWLVLEGARLHGVPQAQALWPACAIEAIHAYSLVHDDLPCMDD 87

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG PTVH ++DE TA++AG+ L    FE+++ P+      +R+ L LSL    G +
Sbjct: 88  DDLRRGLPTVHRKWDEATAVLAGDALQALGFELVADPRCHPDAGVRADLTLSLARAAGAR 147

Query: 158 GMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           GM+ GQ LD+  E  D      ++  +Q  KTGAL+ ++ E+GA +A A       L  +
Sbjct: 148 GMVLGQALDMAAETADTPLTLDEITALQAGKTGALITWSAEAGARLAQADPG---PLTSY 204

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
            + LG+ FQ+ADD+LD E D  
Sbjct: 205 ADRLGLAFQIADDILDVEGDAE 226


>gi|298244906|ref|ZP_06968712.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM
           44963]
 gi|297552387|gb|EFH86252.1| Trans-hexaprenyltranstransferase [Ktedonobacter racemifer DSM
           44963]
          Length = 329

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 9/213 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D + +T     T     L SA  +AL   GK++R+ L      L        L +  A E
Sbjct: 19  DTVDKTFQERATSGLTILNSASMHALGAPGKRLRTALTLLAGKLNTYRFEKLLLLSVAFE 78

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H  +LIHDD+  +D    RRG PTV+  + +  AI+ G+        +I+  +    D
Sbjct: 79  MTHLATLIHDDI--VDESSTRRGNPTVNALFGDKIAILLGDYYFAKTAGLIADIEDPRID 136

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           ++ S  + ++     L+ M  G      +  + +   +   + KT  LM    + GAI++
Sbjct: 137 HLFSDTVATVCEGTILEMMTAG------NIDLSKETYYEKTRSKTACLMAACSKGGAIIS 190

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+  E E L  +G +LG  FQ+ DD+LD  +D
Sbjct: 191 GATPEEIELLYAYGMHLGTAFQIIDDILDYTQD 223


>gi|269958400|ref|YP_003328187.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel]
 gi|269848229|gb|ACZ48873.1| octaprenyl-diphosphate synthase [Anaplasma centrale str. Israel]
          Length = 327

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 12/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
           M       L +    +   L+++  L+ T S+    +   +++     L GGK+IR  ++
Sbjct: 1   MPDAFSRALADLKNLVSEDLEEMERLIVTTSNSDISYITDIIN--HLMLSGGKRIRPIML 58

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                +  +     + + AAIE IH  +L+HDD+  +D    RRG  T +  +    +++
Sbjct: 59  LAVCKMLALQDERRILIAAAIEFIHSATLLHDDV--VDQSESRRGTKTSNSLWGNKASVL 116

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ LL  AF+ + S       N      LS      + G +  QM+  +   I   +  
Sbjct: 117 VGDFLLATAFQWLVSCS-----NFELLTTLSRASCTIVTGEI-QQMVYSKSLDITREKYL 170

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            I   KT AL    CES  +++ +S ++++ L+ FG N GI FQ+ DDLLD      K
Sbjct: 171 EIISAKTAALFSATCESAGVLSESSFDDRKALKNFGHNFGITFQIVDDLLDYTAQHEK 228


>gi|148989224|ref|ZP_01820604.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73]
 gi|147925202|gb|EDK76281.1| GTP-binding protein LepA [Streptococcus pneumoniae SP6-BS73]
          Length = 291

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|302390267|ref|YP_003826088.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200895|gb|ADL08465.1| Polyprenyl synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 323

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 11/215 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           L++ LL +    +   ++ L   I+    GGK+IR  LV   A   N ++     +  A+
Sbjct: 17  LEEELLSSIKTNEPFLSEPLERTIK---AGGKRIRPALVYLSARFGNYDYEKIKPLAVAV 73

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D+  +RRG  TV     +  A+ AG+ +L   F+I+        
Sbjct: 74  ELVHTATLIHDDI--VDDSPLRRGISTVQAAIGKDAAVYAGDYVLARTFKILVDHGDFDI 131

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
               S ++  +            Q  +  D  I         + KT  L   +CE GA  
Sbjct: 132 LKSVSSVLYRVCEGEV------RQKREAFDITISFLDYARRIRKKTALLFALSCELGARG 185

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           A A       L+ +G  LG+ FQ+ DD+LD  ED 
Sbjct: 186 AKADPRTISALKKYGILLGMAFQVMDDILDLTEDE 220


>gi|322381820|ref|ZP_08055774.1| heptaprenyl diphosphate synthase component II-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321154208|gb|EFX46530.1| heptaprenyl diphosphate synthase component II-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 324

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + S+ +++   I+  L+  +      ++        +++ Y   GGK+IR   V     
Sbjct: 5   DIYSRKKKDIAFIEKSLERSIDVDLPTLRD-------ASLLYLKAGGKRIRPVFVLLAGE 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             + +      +   +E IH  SL+HDD+  +D+   RRGK TV  ++D   A+  G+ +
Sbjct: 58  FGHYDLERMKHIAVPLELIHMASLVHDDV--IDDAETRRGKATVRSKWDNRIAMYTGDYV 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A  +++  K      I S+ M+ ++           Q+    +            K 
Sbjct: 116 YAKALTLVTELKNPAIHQIMSKAMIEMSIGE------MEQIRLFFEHGQTLRDYLRRIKR 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L+  +C+ GA+ A AS+N  +RL  FG  +G+ FQ+ DD+LD   
Sbjct: 170 KTALLIAVSCQLGAMTAEASENYAKRLFHFGYYVGMAFQIRDDILDLVG 218


>gi|307709372|ref|ZP_07645830.1| putative geranyltranstransferase [Streptococcus mitis SK564]
 gi|307619955|gb|EFN99073.1| putative geranyltranstransferase [Streptococcus mitis SK564]
          Length = 291

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E     +V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALHVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YVMIAQA--DLPSQIKVDLIANLSFASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEVQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|254491038|ref|ZP_05104219.1| polyprenyl synthetase superfamily [Methylophaga thiooxidans DMS010]
 gi|224463551|gb|EEF79819.1| polyprenyl synthetase superfamily [Methylophaga thiooxydans DMS010]
          Length = 322

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +    A          + +   IE IH  +L+HDD+  +DN  +RRGK T +
Sbjct: 43  GGKRLRPAIAILSAKACGYEGDKHINLATIIEFIHTATLLHDDV--VDNSAMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +FE++        D++R   +LS T NI  +G +  Q+L+  
Sbjct: 101 NLWGNEASVLVGDFLYTRSFEMMVEM-----DSMRLMRILSSTTNIIAEGEVL-QLLNCH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E +   +   KT  L   A + GA+++ ++ + ++ +  +  +LG  FQL DDLL
Sbjct: 155 DADTTEARYLEVIHHKTAKLFEAAGQLGAVISRSADDIEQAMARYAMHLGSAFQLVDDLL 214

Query: 229 DCEE 232
           D  +
Sbjct: 215 DYSQ 218


>gi|75676776|ref|YP_319197.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74421646|gb|ABA05845.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 336

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ A++E +H  +L+HDD+  +D   +RRG+ +  
Sbjct: 55  GGKRLRPMLTLAMANLAGYAGEGHVKLAASVEFMHTATLLHDDV--VDESELRRGRLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MVWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSAAATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G ++    + E+     FG NLGI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPVLGGRPKAEQTAAASFGMNLGIAFQLVDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKSAK 234


>gi|84394037|ref|ZP_00992774.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01]
 gi|84375323|gb|EAP92233.1| octaprenyl-diphosphate synthase [Vibrio splendidus 12B01]
          Length = 323

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLALLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++++  +     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTTLGS-----LKILELMSEAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GAI++ +S   +  ++ +G+ LG  FQL DD++
Sbjct: 155 NPDTTEESYMQVIYSKTARLFEAATQIGAILSESSPEIETAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYTAD-GKE 222


>gi|319400819|gb|EFV89038.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           epidermidis FRI909]
          Length = 319

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLT 71
           K+++  L++ ++ +   +Q      L S       GGK++R   V         N     
Sbjct: 11  KKVEKRLEEAIISSDQTLQDASFHLLSS-------GGKRVRPAFVILSGQFGSNNKTSED 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             RV  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL    + +
Sbjct: 64  TYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQSTAILTGNFLLAMGLKHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S           S+ ++ +            Q  D  +     T        KT  L+  
Sbjct: 122 SEISDTRVHTTISKSIVDVCRGE------LFQFQDQFNSNQTITNYLRRINRKTALLIQL 175

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + + GAI ++AS +   +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 176 STQVGAITSNASNDVIRKLKMIGHYIGMSFQIIDDVLDFTSSEKK 220


>gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
 gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
          Length = 303

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQSN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQMQILATASSKMVSGQVLDLQAEGKQITQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDIIS 237


>gi|240950200|ref|ZP_04754487.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305]
 gi|240295287|gb|EER46073.1| octaprenyl-diphosphate synthase [Actinobacillus minor NM305]
          Length = 327

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A          +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLITVLAARALGYQGAKQITTAAFIEFVHTATLLHDDV--VDESDMRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S      D++    ++S   N   +G +  Q++++ 
Sbjct: 105 AAFGNAASVLVGDYIYTRSFQMMTS-----VDSLEVLKVMSAATNALAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A+AS+  +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEENYMRVIYNKTARLFEAATQCVAIVANASKEIEIALKNYGCYLGTAFQLVDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|58584789|ref|YP_198362.1| geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|58419105|gb|AAW71120.1| Geranylgeranyl pyrophosphate synthase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 328

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 17/226 (7%)

Query: 17  DTILDDLLLQTASHMQT-------QHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           + ILDD++    S M+          + +L + I   L+  GGKK+R  LV     + N 
Sbjct: 9   NDILDDIVSSDLSAMKNFIFRDVNNGDVKLAADIISHLVRSGGKKVRPKLVFIICKMLNY 68

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    ++V A++E IH  +L+HDD+  +D    R G  T +  +   ++I+ G+ LLT A
Sbjct: 69  SGEDRVKVAASVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLLLTLA 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F  +         N+    +LS   +  + G +           I     F I   KT +
Sbjct: 127 FRWLIECG-----NLNILSILSGASHSLVNGEIKQMAARFNSHTI-RKNYFDIIGKKTAS 180

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L    CE+ +++++A+ NE ERL+ FG N G+ FQ+ DD LD   D
Sbjct: 181 LFSACCEAASVISNATSNETERLKNFGLNFGMAFQIIDDTLDYTAD 226


>gi|205355656|ref|ZP_03222426.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346433|gb|EDZ33066.1| geranyltranstransferase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 250

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+MDN   RRG PT
Sbjct: 4   AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPT 63

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL GM+ GQ +D
Sbjct: 64  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGMVIGQAID 121

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 122 CFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQIN 181

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 182 DDIIDVT 188


>gi|160945195|ref|ZP_02092421.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442926|gb|EDP19931.1| hypothetical protein FAEPRAM212_02714 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105573|emb|CBL03117.1| farnesyl-diphosphate synthase [Faecalibacterium prausnitzii SL3/3]
          Length = 293

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 78/202 (38%), Positives = 115/202 (56%), Gaps = 5/202 (2%)

Query: 34  QHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
                +  A RY+LLGG K+IR+ L      +       A +  AA+E +HCYSLIHDDL
Sbjct: 27  PEESEVCRAARYSLLGGGKRIRAILTLSVCDMLGGEMQVAAQFAAAVEMLHCYSLIHDDL 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           P MDN  +RRG+P+ H  + E TA++AG+ LLT AFE+I++        I      +L  
Sbjct: 87  PCMDNDDLRRGRPSCHKAFSESTAMLAGDVLLTEAFEVIANASAT--PQICVAAARALGA 144

Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G +GM+ GQ LD++ E +   E Q+ +I + KTGAL+  A + GA  A A+  + + L
Sbjct: 145 GAGSRGMVYGQELDLKYEALAATEEQLRLIHRNKTGALINAAVQMGAAAAGATPQQCKIL 204

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
             +   LG++FQ+ DD+LD   
Sbjct: 205 ASYAYGLGLVFQIVDDVLDVTS 226


>gi|206970523|ref|ZP_03231475.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH1134]
 gi|206734159|gb|EDZ51329.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH1134]
          Length = 320

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYNQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|304393457|ref|ZP_07375385.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130]
 gi|303294464|gb|EFL88836.1| octaprenyl pyrophosphate synthetase [Ahrensia sp. R2A130]
          Length = 338

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +        + + A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 57  GGKRLRPMLTLSAARMLGYTGDHHVTLAASVEFMHTATLLHDDV--VDESDMRRGKQSAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS    +  +G +  Q+   Q
Sbjct: 115 MVWGNQASVLVGDFLLGQAFRMMVDAGS-----MEALDVLSTASMVIAEGEVM-QLSAAQ 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E     + + KT AL   ACE G I+A A +  ++ LR +G NLG+ FQL DD L
Sbjct: 169 SMETTEDDYMAVIRGKTAALFSAACEVGPILADAGKPARDALRSYGLNLGLAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D    + DL K
Sbjct: 229 DYGGSKADLGK 239


>gi|148826474|ref|YP_001291227.1| octaprenyl-diphosphate synthase [Haemophilus influenzae PittEE]
 gi|148716634|gb|ABQ98844.1| DNA-binding response regulator in two-component regulatory system
           with ArcB or CpxA [Haemophilus influenzae PittEE]
          Length = 323

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARSLGFEGANSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILGIMADATNVLAEGEV-QQLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 214

Query: 229 DCEE 232
           D   
Sbjct: 215 DYSA 218


>gi|224476589|ref|YP_002634195.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222421196|emb|CAL28010.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 318

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 11/219 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS-LFNVNHLTAL 73
           I+  +  +  +  + +++  N  L  A  + L  GGK++R   V   +    N  +    
Sbjct: 6   INREIKKIEKELKNTIKS-SNPILEEASLHLLSSGGKRVRPSFVVLSSEYGVNPRNEDTY 64

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++  ++E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL  A   ISS
Sbjct: 65  KIAVSLELIHMATLVHDDV--IDRSDKRRGRLTISKKWDQETAILTGNYLLALALNNISS 122

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +     + R  ++LS       +G L  Q  D  +     T        KT  L+  A 
Sbjct: 123 IQ-----DKRIHIILSNAIVDVCRGELF-QFQDQFNSNQTITNYLRRINRKTALLIQLAT 176

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           E GA+ A+A      +L+  G  +G+ FQ+ DD+LD   
Sbjct: 177 ELGALSANADLKTANKLKRIGHYIGMSFQIVDDVLDFTS 215


>gi|90420014|ref|ZP_01227923.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336055|gb|EAS49803.1| putative geranylgeranyl pyrophosphate synthase [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 318

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/230 (31%), Positives = 118/230 (51%), Gaps = 7/230 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
             G  ++      RID  L  +L+  A   QT  +  +  ++   L  GK++R  +    
Sbjct: 6   TDGFRTEAAALIARIDARLA-VLVPRALPGQTGLDLAIRESV---LAPGKRLRPMMAALT 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A     +   A+  G A+E +H  SLI DDLP MD+  +RRG+P  H+ + E  A+++  
Sbjct: 62  AGDLGGDEDVAVDAGCAVEMVHAASLILDDLPCMDDATMRRGRPAAHVTHGEDVAVLSAI 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFM 179
            +L+ A+E+++  +  L    R + +  LT  +G++G++GGQ  D++    +    ++  
Sbjct: 122 AILSGAYEMLARVE-GLSPAARLEAVTVLTRAVGVEGLVGGQFADLRGGRAERPLHEIAA 180

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               KTGAL   A E+GAI A A +  +  LR F   LG  FQL DDLLD
Sbjct: 181 TNGRKTGALFLAAVETGAIAAGAGETTRAHLRGFATELGHAFQLLDDLLD 230


>gi|309973622|gb|ADO96823.1| Octaprenyl-diphosphate synthase [Haemophilus influenzae R2846]
          Length = 329

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGANSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILGIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|58425655|gb|AAW74692.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 408

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 15/222 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 101 AAVDAVIRRRLASDVM-LINQIADHIISA------GGKRLRPMLVILAGHAAGGSGPEHH 153

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 154 QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 211

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 212 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 265

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA+ + A    +++L  +G  LG  FQ+ADD+LD   +  
Sbjct: 266 RLGALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAA 307


>gi|154174645|ref|YP_001409121.1| geranyltranstransferase [Campylobacter curvus 525.92]
 gi|153793122|gb|EAU00317.2| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Campylobacter curvus 525.92]
          Length = 300

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 78/240 (32%), Positives = 117/240 (48%), Gaps = 25/240 (10%)

Query: 18  TILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTAL 73
           T+LD+ +    +++      +     A+   L  GGK  R+ L+              A+
Sbjct: 2   TLLDEFIKFLNANLPKAPSFHPYYEEALGVMLKAGGKHFRAQLLLGVVDALRPQLTQNAM 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           RV   +E +H YSLIHDDLP+MD+  +RRG PT+H +YDEVTAI+AG+ L T AF  IS 
Sbjct: 62  RVALGLEMMHTYSLIHDDLPAMDDAPLRRGVPTLHTRYDEVTAILAGDALNTQAFYEISR 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-------------------E 174
               L+  +  + +  L+ N G  GM+ GQ LD   E  D                    
Sbjct: 122 A--DLEAPVVVKCVEILSANAGASGMVLGQALDCFFENSDKADVKNAKNRLGLAQKRLNL 179

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            ++  +   KT  L+  + E GA++A     + ER+   G +LG+ FQ+ DDL+D   D 
Sbjct: 180 DELEFLHIHKTAKLIAASLEMGAVIAALDAAQCERIYGIGLDLGLAFQIEDDLIDATSDE 239


>gi|297545452|ref|YP_003677754.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843227|gb|ADH61743.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 322

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 19/231 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           N  + S+L E  K ++  + +    +   ++    D + ++       GK +R   V   
Sbjct: 8   NLEIKSELTEVIKIMEKRIKN----SNKSIRNILLDMIYNS-------GKMLRPAFVILA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +    L + AAIE +H  +L+HDD+  +DN  IRR KPT+  +Y +  A+  G+
Sbjct: 57  GKFGEYDREKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQAKYGKDYAVFIGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + +F ++S   T       S+++  +           GQ     + +I         
Sbjct: 115 FLFSESFLLLSDNITVSNLKKVSKVVSKICKGEI------GQFESRHNIYITINDYLRRI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT AL   +   GA  +   ++  + L   G N+G+ FQ+ DD+LD   
Sbjct: 169 AAKTAALFALSFYVGAYESKCDESLAKALGSIGYNIGMAFQIIDDILDYTG 219


>gi|52549424|gb|AAU83273.1| bifunctional short chain isoprenyl diphosphate synthase [uncultured
           archaeon GZfos27B6]
          Length = 360

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 8/211 (3%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +++ +  D L   I   L  GGK++R  L      L       AL     IE  H +SL 
Sbjct: 41  NLEGRGPDTLYKPIIDLLGRGGKRLRPSLCLMACELVGGEIKKALPTAICIEFFHNFSLA 100

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+   D+  +RRG+P +H++Y    A+ AG+GL   ++E + + +  L      ++  
Sbjct: 101 HDDIE--DDSKLRRGEPALHVKYGIPIAVNAGDGLYALSYEALKANRNLLGLERAWKIFE 158

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ---KMKTGALMCFACESGAIMAHASQN 205
            +     +  +  GQ +D++ +   E     +    + KT  L   + + GAI   AS  
Sbjct: 159 EIAELCVV--LSEGQAMDLEFKERKEMGELEVIETLRKKTAKLFGVSAKCGAIAGGASHE 216

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             E L    E++GI FQ+ DD+L+   +  K
Sbjct: 217 TAEDLSSAWEDIGIAFQIRDDILNVLGEEEK 247


>gi|307708727|ref|ZP_07645190.1| geranyltranstransferase [Streptococcus mitis NCTC 12261]
 gi|307615301|gb|EFN94511.1| geranyltranstransferase [Streptococcus mitis NCTC 12261]
          Length = 291

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|317053956|ref|YP_004117981.1| Polyprenyl synthetase [Pantoea sp. At-9b]
 gi|316951951|gb|ADU71425.1| Polyprenyl synthetase [Pantoea sp. At-9b]
          Length = 301

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 77/228 (33%), Positives = 119/228 (52%), Gaps = 12/228 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
           S+L    +R+ + L+ LL         Q  D++ +A+R   L  GK+IR  L+   A   
Sbjct: 13  SELPLLHQRLQSHLEQLLPC------GQQADQVRAAMRAGTLAPGKRIRPLLLLLAAHDM 66

Query: 66  NVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +      L +  A+E +H  SLI DD+PSMDN  +RRG+PTVH ++    AI+A   L
Sbjct: 67  GCDSQQPGLLDLACAVEMVHAASLILDDIPSMDNAQMRRGRPTVHREFGANVAILAAIAL 126

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQ 181
           L+ AFE+I+     L    +S  +  L+  +GLQG++ GQ  D+ D         + +  
Sbjct: 127 LSRAFEVIA-LAPGLAAQRKSDAIAELSAAVGLQGLVQGQFQDLHDGAHARSAEAIELTN 185

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++KT  L     +  AI A+AS   ++ L  F ++LG+ FQL DDL D
Sbjct: 186 ELKTSVLFRATLQMAAIAANASPTVRQNLSAFAQDLGLAFQLLDDLTD 233


>gi|89052580|ref|YP_508031.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
 gi|88862129|gb|ABD53006.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
          Length = 288

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 15/236 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
             + L++   RI   L   L           +D +   +RYA  GGK++R FL  E A+L
Sbjct: 2   FKTALRDAQTRIGDFLTRQLADL-------GDDTIAQGMRYATGGGKRLRGFLALESAAL 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F+V    AL    A+EC+H YSL+HDDLP MD+  +RRG+PTVH ++D+ TA++ G+ L 
Sbjct: 55  FDVPPGQALYAAGAVECLHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDDATAVLVGDALQ 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           T+AFE+IS       +  R  L  SL    G QGM+ GQ  DI  E     +   ++  +
Sbjct: 115 TFAFELISREDAGTAEE-RVALTASLAKASGAQGMVLGQAQDIAAETAGRALTLQEITGL 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           Q  KTG L+ +   +GA++  A       L+ +   +G+ FQ+ADD+LD E D  K
Sbjct: 174 QANKTGRLIEWPAHAGAVLGGADP---APLQRYARAIGLAFQIADDILDVEGDAAK 226


>gi|320101826|ref|YP_004177417.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644]
 gi|319749108|gb|ADV60868.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644]
          Length = 346

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 8/227 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           ++ +    I + L +     A  + ++H          +   GK++R  LV  C      
Sbjct: 26  RIADFLAPIASELAEAERIFAQELGSRHPFVQQLVDHCSAFRGKRLRPALVLLCGQAVGR 85

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  + A +E IH  +L+HDD+  +D   +RR   T++ ++   TA++ G+ L T+A
Sbjct: 86  LTPDHPVLAAVVEMIHTATLVHDDI--LDESLVRRHAATINAEWGNETAVLLGDYLFTHA 143

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F + +S ++ L      + +   T+ +    M   Q+    D  +DE+    I + KT  
Sbjct: 144 FHLAASLESTLA----CRWIGRATNLVCEGEM--NQVHHRGDLDLDESTYLDIIQGKTAE 197

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           L+  +C+ GA  A A     ERL  FG +LG  FQ+ADD+LD   + 
Sbjct: 198 LIAVSCKLGAHYAGADVETTERLERFGRDLGSAFQIADDVLDLWGEE 244


>gi|332881619|ref|ZP_08449267.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp.
           oral taxon 329 str. F0087]
 gi|332680258|gb|EGJ53207.1| putative octaprenyl pyrophosphate synthetase [Capnocytophaga sp.
           oral taxon 329 str. F0087]
          Length = 323

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L +  K ++  + D        +Q Q N  L+ A+R+ L   GK +R  L    A  +  
Sbjct: 4   LTQIRKPVEREMKDFESLFGITLQHQ-NPLLMIALRHVLSRKGKLMRPILTLLAAKKYGE 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            + + L    ++E +H  SL+HDD+  +D   +RRG+ +V+   D   A++ G+ LL+ A
Sbjct: 63  INDSVLHAAVSLEMLHTASLVHDDV--VDESGVRRGQSSVNALLDNKAAVLVGDYLLSTA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            +  +        ++R   +++        G L  Q+ +++ + I E Q F + + KT +
Sbjct: 121 LKHAAMAG-----DLRVVDLVARLGQTLSDGEL-QQLSNVKSDEISENQYFNVIRRKTAS 174

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
           L     E GA+++ AS++E  RL  FG  +GI FQ+ DD+ D    ++ K
Sbjct: 175 LFAVCAEVGALLSGASEDEIRRLGEFGTYVGICFQIRDDVFDYYDAEVGK 224


>gi|222823159|ref|YP_002574732.1| geranyltranstransferase [Campylobacter lari RM2100]
 gi|222538380|gb|ACM63481.1| geranyltranstransferase [Campylobacter lari RM2100]
          Length = 282

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 7/218 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH-LTALRVGA 77
               L Q    +Q+ H      A+++ L  GGK  R+ L+    +  N      AL    
Sbjct: 6   FKQHLEQNFPSIQSFHP-FFNEALKWMLEAGGKHFRAQLLLGIVNTKNPALFEKALNAAL 64

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MDN  +RRGK T+H +YDE TAI+ G+ L T AF ++S     
Sbjct: 65  ALEFIHTYSLIHDDLPAMDNASLRRGKQTLHKKYDETTAILVGDALNTEAFLLLSKL--D 122

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACES 195
           LK+NIR +L+ +L  N GL GM+ GQ +D   E I  +  QV  +   KT  L+  A + 
Sbjct: 123 LKENIRLKLIETLAFNAGLGGMIIGQAIDCYFEDIPLNLEQVEFLHIHKTARLIAAALKM 182

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           G  +    + E E++   G  +G+IFQ+ DD++D   D
Sbjct: 183 GCEICELDEKECEQIYDIGLLIGLIFQIKDDIIDATLD 220


>gi|88813013|ref|ZP_01128256.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231]
 gi|88789791|gb|EAR20915.1| Trans-hexaprenyltranstransferase [Nitrococcus mobilis Nb-231]
          Length = 253

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   A   +      + + A +E IH  +L+HDD+  +D   +RRG+ T  
Sbjct: 43  GGKRLRPLVVLLAARACSCRDHQHILLAAIVEMIHTATLLHDDV--VDESDMRRGRETAR 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T AFE++   +           + S   N   +G +  Q+L+I 
Sbjct: 101 QIWGNGASVLVGDFLYTRAFEMMVELQ-----QTAVMGIFSRATNTIAEGEVL-QLLNIH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  + E +   +   KT AL    C   A++   S  ++  +  +G +LG  FQL DD L
Sbjct: 155 DPDVTEERYREVIFRKTAALFEAGCRLAALLGARSVQDQAAMAAYGRHLGTAFQLIDDAL 214

Query: 229 DCEE 232
           D + 
Sbjct: 215 DYDG 218


>gi|295698395|ref|YP_003603050.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA]
 gi|291157112|gb|ADD79557.1| geranyltranstransferase [Candidatus Riesia pediculicola USDA]
          Length = 302

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 82/231 (35%), Positives = 128/231 (55%), Gaps = 7/231 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
             + SK I   ++D+L+Q     Q  H + L++ IRY +  GKKIRS  +    S+  V+
Sbjct: 9   FHQKSKIIKKQVNDILMQKVRSFQKIHRN-LINVIRYIIFEGKKIRSCFIYSVGSMLKVS 67

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                ++ A++EC+H YSLIHDDLPSMDN  IRR K + HI + E  AI+AGN L   AF
Sbjct: 68  CKQISKIAASVECMHAYSLIHDDLPSMDNDDIRRNKKSCHIVFGEANAILAGNALQALAF 127

Query: 129 EIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMK 184
           E++ S  +  L      Q++  LT   G++G+ GGQ LDI  +    ++   + +I   K
Sbjct: 128 ELLLSLNRKNLDHKSHLQIIRELTIAGGIKGICGGQSLDISKKKRCHMNIELLNIIYFYK 187

Query: 185 TGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T +L+  +       +     +     L  + EN+G++FQ+ADDL+D ++D
Sbjct: 188 TVSLIRASIRMIFYASRYRYEKKLILILDDYSENIGLLFQIADDLIDFKKD 238


>gi|123965918|ref|YP_001010999.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200284|gb|ABM71892.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9515]
          Length = 323

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   + +
Sbjct: 4   VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISRD 63

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 64  FNLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D     ++       KT
Sbjct: 122 QASWHLANLDNVKVVKLLSRVIMDLAEGEI------KQNLNRFDSGQTFSKYINKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  + ++  ++++   ++   L  FG+N+G+ FQ+ DD+LD   
Sbjct: 176 ASLIANSTKAAGVLSNLEDDKLNCLYEFGKNIGLAFQVVDDILDFTG 222


>gi|83594282|ref|YP_428034.1| farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170]
 gi|83577196|gb|ABC23747.1| Farnesyltranstransferase [Rhodospirillum rubrum ATCC 11170]
          Length = 360

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 18/228 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           + KR++ I+ + +    + +  Q    +++A      GGK++R  L    A L       
Sbjct: 47  DLKRVNEIIVERMHSPIALIP-QLAGHIIAA------GGKRLRPLLTLASARLCGYEGER 99

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++ A +E IH  +L+HDD+  +D   +RRG+ + +  +    +++ G+ L + +FE++
Sbjct: 100 HAQLAACVEFIHTATLLHDDV--VDESLLRRGRDSANALWGNKASVLVGDFLFSRSFELM 157

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
                     ++   +LS    +  +G +  Q++   D    E Q   + + KT  L   
Sbjct: 158 VEDGV-----LKVLGILSHASRVIAEGEVA-QLITANDMATTEAQYLEVIRGKTAQLFAA 211

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           AC  GA++A   + E+E L  +G  LGI FQL DD LD    ++DL K
Sbjct: 212 ACRIGAVVAERPEAEEEALDTYGMTLGIAFQLVDDYLDYSARQQDLGK 259


>gi|299768927|ref|YP_003730953.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter sp. DR1]
 gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
           [Acinetobacter sp. DR1]
          Length = 303

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 14/232 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FN 66
           L++  +RI     DLL   A+       + L SA+ +A+ LGGK++R  L    ASL  N
Sbjct: 12  LKQAQQRIQQ---DLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQPN 65

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N   A R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ + E TA++AG+ L + 
Sbjct: 66  PNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSM 125

Query: 127 AFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           AFE++ S    +      + ++L            M+ GQ+LD+Q E   I + ++  I 
Sbjct: 126 AFEVLGSRLFDEQGQGTDAAIVLKQIQILATATSKMVCGQVLDLQAEAKQIAQDELENIH 185

Query: 182 KMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ +   +     +LR +G+ +G+ FQ+ DD+LD   
Sbjct: 186 RNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQTIGLAFQVLDDILDITS 237


>gi|288556090|ref|YP_003428025.1| heptaprenyl diphosphate synthase component II [Bacillus
           pseudofirmus OF4]
 gi|288547250|gb|ADC51133.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Bacillus pseudofirmus OF4]
          Length = 323

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 10/226 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL +   +  + +  +  +  + +Q +H D L +A  + L  GGK+IR   V   A    
Sbjct: 2   KLADIYMQFQSDITIIEQELEASVQARH-DVLKNASTHLLKAGGKRIRPVFVLLAAKFGT 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +      +   +E +H  SL+HDD+  +D+  +RRGK TV  Q+D   A+  GN +   
Sbjct: 61  YDIHVLKNIAVPLELVHMASLVHDDV--IDDAELRRGKRTVKSQWDNKVAMYTGNYIFAK 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A E      +   D+ R   +LS T      G +  Q+ D  +   +        K KT 
Sbjct: 119 AVE-----ASAYFDHPRVHQVLSNTLVEMCIGEVE-QIRDQYNWGQNLRVYLRRIKRKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L+  +CE GA+ A A    ++ L  FG N+G+ FQ+ DD+LD   
Sbjct: 173 LLIAVSCELGALAADADPVIQKHLYNFGYNVGMSFQITDDILDFVG 218


>gi|239908218|ref|YP_002954959.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1]
 gi|239798084|dbj|BAH77073.1| octaprenyl-diphosphate synthase [Desulfovibrio magneticus RS-1]
          Length = 322

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 9/198 (4%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  +   +R+ LL GGK++R  L    A            +  ++E +H  +L+HDD+  
Sbjct: 27  NPMVQPVVRHVLLAGGKRLRPLLTILTARAMGYRADDVYPLACSLEFLHSATLLHDDI-- 84

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D   +RRG+ + H+++     I+AG+ LL  A  +++         + S+ +L      
Sbjct: 85  LDGAKLRRGRESAHVRFGSTHTILAGDVLLALANRLVAEYDNPELTKLLSEALLQTATGE 144

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            L      ++  ++D  +     F I   KT  L+  +C+ GA++A AS    +     G
Sbjct: 145 IL------EIAHLRDVDLPLDTYFSIITGKTAYLIQASCQCGAVLAGASPRLIQAAADLG 198

Query: 215 ENLGIIFQLADDLLDCEE 232
            ++G+ FQL DD LD   
Sbjct: 199 HHIGVAFQLVDDALDYTS 216


>gi|298490219|ref|YP_003720396.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708]
 gi|298232137|gb|ADI63273.1| solanesyl diphosphate synthase ['Nostoc azollae' 0708]
          Length = 323

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  +L    + +    +  L +A  +    GGK+IR  +V   +    +       
Sbjct: 11  VEADL-RILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATMLEKDITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  +    A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESNVRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q L+  D  +           KT +L+  
Sbjct: 128 ANLDNLDVVKLLSEVIMDLAAGEI------QQGLNRFDTNLSTETYLKKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  SQ   E L  +G++LG+ FQ+ DD+LD   
Sbjct: 182 SSKAAGLLSEVSQKSAENLYNYGKHLGLAFQIVDDILDFTG 222


>gi|114048617|ref|YP_739167.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-7]
 gi|113890059|gb|ABI44110.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-7]
          Length = 331

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       D++R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQETALGDYGKYLGTAFQLTDDLL 222

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 223 DYTADSE 229


>gi|148985099|ref|ZP_01818338.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71]
 gi|147922544|gb|EDK73662.1| GTP-binding protein LepA [Streptococcus pneumoniae SP3-BS71]
 gi|301800132|emb|CBW32736.1| putative geranyltranstransferase [Streptococcus pneumoniae OXC141]
          Length = 291

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVGLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|86748213|ref|YP_484709.1| farnesyltranstransferase [Rhodopseudomonas palustris HaA2]
 gi|86571241|gb|ABD05798.1| Farnesyltranstransferase [Rhodopseudomonas palustris HaA2]
          Length = 336

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMANLTGYAGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAASATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G  +A   + E+   R FG N+GI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPAIADRPKAEQSACRSFGMNIGIAFQLVDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKAAK 234


>gi|309320748|pdb|3P41|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
           Pseudomonas Fluorescens Pf-5 Complexed With Magnesium
           And Isoprenyl Pyrophosphate
          Length = 303

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 121/242 (50%), Gaps = 13/242 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L +    +  R+D     L    +  +      RL  A RY++  GGK++R  L     
Sbjct: 9   SLTAYQASSQARVDAAXHTLFTAPSPELA-----RLYEAXRYSVXNGGKRVRPLLAYAAC 63

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    A     A+E IH YSL+HDDLP+ D+  +RRG+PT H  +DE  AI+AG+G
Sbjct: 64  EALGGKPEQANGAACAVELIHAYSLVHDDLPAXDDDDLRRGQPTTHKAFDEAXAILAGDG 123

Query: 123 LLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFM 179
           L + AF  +  P  +     IR + + +L    G  G +GGQ +D+      +D+  +  
Sbjct: 124 LQSLAFSALLDPALSDASAEIRLRXVTTLAQAAGPAGXVGGQAIDLGSVGLKLDQQALEY 183

Query: 180 IQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
             + KTGAL+  +   GA+ +  A + E + L+ + + +G+ FQ+ DD+LD E D   L 
Sbjct: 184 XHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLG 243

Query: 236 KK 237
           K+
Sbjct: 244 KR 245


>gi|68171324|ref|ZP_00544722.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88657619|ref|YP_506918.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67999251|gb|EAM85903.1| Farnesyltranstransferase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599076|gb|ABD44545.1| octaprenyl-diphosphate synthase [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 325

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 13/241 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     +   +    +   LD +      H   +H   +   +++ +  GGK+IR  +  
Sbjct: 1   MTNDFSNTFLQLKSLVQQDLDSM-ESLILHQNNKHITLITEIVQHLIKSGGKRIRPIIFF 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + N N+   + + AAIE IH  +L+HDD+  +D   +RRG+ T ++ +    +I+ 
Sbjct: 60  IICKMLNCNNENKVPIAAAIELIHNATLLHDDV--IDESELRRGEKTSNVIWGNKASILV 117

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  +F+ +   K     N+    +LS      + G +  QM+   +  I + +   
Sbjct: 118 GDFLLAISFQWLIKCK-----NLNILSILSQASKDVIVGEV-QQMISSHNINISKEKYIE 171

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT AL    CES A +A  S  EKE L+ FG N GI FQ+ DD+LD     E   K
Sbjct: 172 IISAKTAALFSATCESAANLAQTSNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGK 231

Query: 237 K 237
           K
Sbjct: 232 K 232


>gi|24375152|ref|NP_719195.1| octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1]
 gi|24349926|gb|AAN56639.1|AE015800_12 octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1]
          Length = 323

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       D++R   +L+ T N+  +G +  Q+++  
Sbjct: 101 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSMRVLRVLADTTNVLAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A AS  ++  L  +G+ LG  FQL DDLL
Sbjct: 155 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETALGDYGKYLGTAFQLTDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYTAD 219


>gi|300814962|ref|ZP_07095190.1| geranyltranstransferase family protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300510932|gb|EFK38204.1| geranyltranstransferase family protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 289

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 82/237 (34%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 11  ENSKRIDTI---LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +N + ++TI   LD  L  T +++      ++  +++Y+L  GGK+IR  L     +   
Sbjct: 2   KNLEELNTIIGELDSYLSNTFTYVDDSLA-KIYESMKYSLFSGGKRIRPLLCMITYNELA 60

Query: 67  VNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            N      L   A +E IH YSLIHDDLP+MD+  +RR KPT H  Y E  AI+AG+GLL
Sbjct: 61  ENPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLL 120

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
             + E+IS     L D    +  +     + ++ G+ GM+GGQ   +D  +E  +E    
Sbjct: 121 NMSMEVISKYMESLDDIDELKKCIKALKFIYNSSGVLGMIGGQLLDIDYLNEQYNEELCE 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KT AL+  +  +GAIMA        +L+ FG+ +G+ +Q  DDLLD  +DL 
Sbjct: 181 DMYSLKTAALLKASIVTGAIMAGCDGEIITKLKEFGQYIGLAYQYKDDLLDMNKDLK 237


>gi|324995302|gb|EGC27214.1| geranyltranstransferase [Streptococcus sanguinis SK678]
 gi|332366064|gb|EGJ43820.1| geranyltranstransferase [Streptococcus sanguinis SK1059]
          Length = 291

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V +A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++A   Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIAGVEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|30019662|ref|NP_831293.1| farnesyltransferase [Bacillus cereus ATCC 14579]
 gi|29895206|gb|AAP08494.1| Farnesyltransferase [Bacillus cereus ATCC 14579]
          Length = 323

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 18  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 74

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 75  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 132

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 133 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 186

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 187 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 225


>gi|324993385|gb|EGC25305.1| geranyltranstransferase [Streptococcus sanguinis SK405]
          Length = 291

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/233 (33%), Positives = 124/233 (53%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   I+  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQIKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++A A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIAEAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|301794294|emb|CBW36718.1| putative geranyltranstransferase [Streptococcus pneumoniae INV104]
          Length = 291

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|288800531|ref|ZP_06405989.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332744|gb|EFC71224.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 325

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 14/233 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF 65
            L    K I   L+  +    + ++  H D LLS +   +    GK++R  L+   A  F
Sbjct: 3   YLSVIKKPITDELNHFIELFNTSLE--HQDGLLSQVLMFIKQRSGKRMRPMLMLLVAKAF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                        +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+ +L+
Sbjct: 61  GRVSEVTQHAAIGLELLHTASLVHDDV--VDESGERRGQASVNAFYDNKVAVLVGDYILS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +S   +    +  ++L  +L+    L      Q+ +I ++ I E   + + K KT
Sbjct: 119 TALLHVSFTSSDRIVSGLAELGRTLSDGEIL------QLENISNQTISEEAYYEVIKRKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
            AL     E GA+   AS+++ E+ R FG +LG+ FQ+ DD+ D  E  D+ K
Sbjct: 173 AALFEACTEIGALSVGASKDDVEQARLFGLHLGMAFQIRDDIFDYYESNDIGK 225


>gi|282897366|ref|ZP_06305368.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
 gi|281198018|gb|EFA72912.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
          Length = 323

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL- 73
           ++  L  +L    + +    +  L +A  +    GGK+IR  +V   +    +    +L 
Sbjct: 11  VEADL-RILADNLTQLVGNRHPILYAAAEHLFGAGGKRIRPAIVLLISRATTLEEDISLG 69

Query: 74  --RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   IRRG PTVH  +    A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESDIRRGVPTVHSLFGNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q L+  D  +           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSEVIMDLAAGEI------QQGLNRFDTSLSTETYLKKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +S  I+++ S      L  +G++LG+ FQ+ DD+LD   
Sbjct: 182 SAKSAGILSNVSPQSANNLYNYGKDLGLAFQIVDDILDFTG 222


>gi|283780902|ref|YP_003371657.1| polyprenyl synthetase [Pirellula staleyi DSM 6068]
 gi|283439355|gb|ADB17797.1| Polyprenyl synthetase [Pirellula staleyi DSM 6068]
          Length = 349

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           L + +    + I+  L   L      +           +RY  LLGGK++R  L+     
Sbjct: 34  LYAPVAAEMQLIEQRLRTELSSKHPFVD--------ELVRYGCLLGGKRLRPALLLLTGK 85

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    L +   +E IH  +L+HDD+  +D   +RR   TV+ ++D  ++++ G+ L
Sbjct: 86  ALGGITPAHLTLATVVEMIHTATLVHDDV--LDEAKVRRHLATVNARWDNESSVLLGDYL 143

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T+AF + S+      D +    ++    NI  +G L  Q     +  + +++ F I + 
Sbjct: 144 FTHAFHLASTL-----DTVVGCRVIGRATNIVCEGELL-QKGSRGNFRLTQSEYFEIIEG 197

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT  L   +C  GA  + AS    +++  FG +LGI FQ+ADDLLD   +  
Sbjct: 198 KTAELTACSCYLGAHFSAASVEVCDQMDGFGRDLGIAFQIADDLLDVLGEEK 249


>gi|148556350|ref|YP_001263932.1| polyprenyl synthetase [Sphingomonas wittichii RW1]
 gi|148501540|gb|ABQ69794.1| Polyprenyl synthetase [Sphingomonas wittichii RW1]
          Length = 341

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA L +       ++ A +E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 60  GGKRMRPMLTLACAKLLDYAGERHHKLAATVEFIHTATLLHDDV--VDQSGLRRGRSTAN 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ L + +FE++    +     +R   +LS    +  +G +  Q+   +
Sbjct: 118 MIWGNAASVLVGDFLFSRSFELMVEDGS-----LRVLRILSNASAVIAEGEVN-QLTAQR 171

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E +   I   KT  L   AC   A++A      +E L  +G  LGI FQL DD++
Sbjct: 172 RIETSEERYLEIIAAKTAVLFAAACRIAAVVAEREPAVEEALDQYGRYLGIAFQLVDDVI 231

Query: 229 DCEED 233
           D   D
Sbjct: 232 DYVSD 236


>gi|75762755|ref|ZP_00742585.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
           Farnesyltransferase / Heptaprenyl diphosphate synthase
           component II [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74489758|gb|EAO53144.1| Farnesyl pyrophosphate synthetase  / Geranyltranstransferase /
           Farnesyltransferase / Heptaprenyl diphosphate synthase
           component II [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 323

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 18  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 74

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 75  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 132

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 133 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 186

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 187 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 225


>gi|126733996|ref|ZP_01749743.1| Farnesyltranstransferase [Roseobacter sp. CCS2]
 gi|126716862|gb|EBA13726.1| Farnesyltranstransferase [Roseobacter sp. CCS2]
          Length = 332

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 9/205 (4%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
             M ++H  R+     + +  GGK++R  L    A +   +    + + A +E IH  +L
Sbjct: 31  ERMASEHAPRIPEVTAHLVEAGGKRLRPMLTLAAARMCGYDGPYHVHLAATVEFIHTATL 90

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D    RRG+PT ++ +D  ++++ G+ L   +F+++    +     +R   +
Sbjct: 91  LHDDV--VDESSQRRGRPTANLLWDNTSSVLVGDYLFARSFQLMVETGS-----LRVLDI 143

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L+       +G +  Q+    D    E     + + KT AL   A E G  +A      K
Sbjct: 144 LANAAATIAEGEVL-QLTAASDLATTEDIYLQVVRGKTAALFSAAMEVGGEIADQDAATK 202

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
           + L  +G+ LGI FQ+ DDLLD   
Sbjct: 203 QALFDYGDALGISFQIVDDLLDYGG 227


>gi|330997298|ref|ZP_08321151.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella
           xylaniphila YIT 11841]
 gi|329571093|gb|EGG52800.1| putative octaprenyl pyrophosphate synthetase [Paraprevotella
           xylaniphila YIT 11841]
          Length = 323

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L +  K ++  + D        +Q Q N  L+ A+R+ L   GK +R  L    A  +  
Sbjct: 4   LTQIRKPVEREMKDFESLFGITLQHQ-NPLLMIALRHVLSRKGKLMRPILTLLAAKKYGE 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            + + L    ++E +H  SL+HDD+  +D   +RRG+ +V+   D   A++ G+ LL+ A
Sbjct: 63  INDSVLHAAVSLEMLHTASLVHDDV--VDESGVRRGQSSVNALLDNKAAVLVGDYLLSTA 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            +  +        ++R   +++        G L  Q+ +++ + I E Q F + + KT +
Sbjct: 121 LKHAAMAG-----DLRVVDLVARLGQTLSDGEL-QQLSNVKSDEISENQYFEVIRRKTAS 174

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
           L     E GA+++ AS+NE  RL  FG  +GI FQ+ DD+ D    ++ K
Sbjct: 175 LFAVCAEVGALLSGASENEILRLGEFGTYVGICFQIRDDVFDYYDAEVGK 224


>gi|268592839|ref|ZP_06127060.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131]
 gi|291311626|gb|EFE52079.1| octaprenyl-diphosphate synthase [Providencia rettgeri DSM 1131]
          Length = 323

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          +     +V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAGRSLGYSGHKHTQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+A+A+  +++ L+ +G  +G  FQL DDLL
Sbjct: 155 DPNITEENYMQVIYSKTARLFEAAAHASAILANATPEQEKALQDYGRYIGTAFQLIDDLL 214

Query: 229 DCEED---LPK 236
           D + D   L K
Sbjct: 215 DYDADNAQLGK 225


>gi|261406049|ref|YP_003242290.1| trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10]
 gi|261282512|gb|ACX64483.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. Y412MC10]
          Length = 324

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 9/210 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +         +  L     + L  GGK++R   V       + +      V   +E
Sbjct: 15  DVIERELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDIDKLKHVAVPLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+   RRGKPTV  ++D   A+  G+ +   A ++ +  K     
Sbjct: 75  LIHSASLVHDDV--IDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALQLTTHLKQPEIH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I ++ M+ ++           Q+ D  +   D  +  +  + KT  L+  +C+ GA+ A
Sbjct: 133 QILAKAMVEMSIGE------MEQIRDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A +     L  FG N+G+ FQ+ DDLLD 
Sbjct: 187 DADRKVANSLYRFGYNVGMAFQIQDDLLDL 216


>gi|187925422|ref|YP_001897064.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN]
 gi|187716616|gb|ACD17840.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
          Length = 330

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+ ++++ ++   L      +  Q ++ ++SA      GGK++R  L+   A
Sbjct: 12  ASLLAPIAEDMQQVNRVIRHRLASDVM-LINQISEYIISA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++          +R   +LS   NI  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A + GA++A +    +     FG  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAAQLGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTG 226


>gi|148239374|ref|YP_001224761.1| prenyl transferase [Synechococcus sp. WH 7803]
 gi|147847913|emb|CAK23464.1| Prenyl transferase [Synechococcus sp. WH 7803]
          Length = 323

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGK++R  +V   +   +
Sbjct: 2   TTVTELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PEGELSPRHRRLAEITEMIHTASLVHDDV--VDEAGTRRGVETVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFR------YDTGQTFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  +  +  +++  ++ + E L  +G  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLVANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVDDILDFTG 222


>gi|194334004|ref|YP_002015864.1| polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194311822|gb|ACF46217.1| Polyprenyl synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 324

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 10/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           ++E +  +   L+    +    +++  N  +   +RY L   GK++R  LV   A +   
Sbjct: 3   IKEVTVSVSQELETFRQRYKVALKSD-NSLIDKVMRYILKQQGKQVRPLLVMLGAKVCGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               + R    +E +H  +L+HDD+  +D   +RRG  +++  +    A++ G+ +L+  
Sbjct: 62  VADASYRAAIMVELLHSATLVHDDV--VDGAEMRRGLASINAVWKNKIAVLIGDYMLSKG 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
                   +    + RS  M+S       +G +  Q+   +   I E     +   KT +
Sbjct: 120 L-----LYSLDHKDYRSLHMVSDAVRRMSEGEIL-QIQKTRSLDISEEDYLKVISDKTAS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  +C  G       + + E LR +GE LG+ FQ+ DDLLD   D  K
Sbjct: 174 LLSTSCAMGGASVTDDEEKIEALRNYGEFLGLAFQIRDDLLDYTGDSNK 222


>gi|15903130|ref|NP_358680.1| geranyltranstransferase [Streptococcus pneumoniae R6]
 gi|116516004|ref|YP_816536.1| geranyltranstransferase [Streptococcus pneumoniae D39]
 gi|169833983|ref|YP_001694642.1| geranyltranstransferase (farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae Hungary19A-6]
 gi|225856878|ref|YP_002738389.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae P1031]
 gi|15458710|gb|AAK99890.1| Farnesyl diphosphate synthase [Streptococcus pneumoniae R6]
 gi|116076580|gb|ABJ54300.1| geranyltranstransferase [Streptococcus pneumoniae D39]
 gi|168996485|gb|ACA37097.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae Hungary19A-6]
 gi|225724667|gb|ACO20519.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae P1031]
          Length = 291

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|332362900|gb|EGJ40693.1| geranyltranstransferase [Streptococcus sanguinis SK49]
          Length = 291

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/233 (33%), Positives = 124/233 (53%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   I+  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQIKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++A A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIAEAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|218708400|ref|YP_002416021.1| octaprenyl-diphosphate synthase [Vibrio splendidus LGP32]
 gi|218321419|emb|CAV17369.1| Octaprenyl-diphosphate synthase [Vibrio splendidus LGP32]
          Length = 323

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLALLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++++  +     +R   ++S + N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTTLGS-----LRILELMSESVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GAI+  +S   +  ++ +G+ LG  FQL DD++
Sbjct: 155 NPDTTEESYMQVIYSKTARLFEAATQIGAILTESSPEIETAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYTAD-GKE 222


>gi|229069166|ref|ZP_04202457.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           F65185]
 gi|228713918|gb|EEL65802.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           F65185]
          Length = 320

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|325295651|ref|YP_004282165.1| trans-hexaprenyltranstransferase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066099|gb|ADY74106.1| Trans-hexaprenyltranstransferase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 324

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 11/225 (4%)

Query: 14  KRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           K  + I ++L    + +  +   +   +L+A  Y L  GGK++R  L      L      
Sbjct: 5   KPFEVIREELEKAEECSRELLNSNVRLVLTAGGYILDSGGKRVRPGLTIISGKLVEAPLE 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             + V   +E +H  +L+HDD+  +D   +RRG+ + +  +    A++ G+ +   A  I
Sbjct: 65  RLIPVATVMEYMHTATLLHDDI--VDGAKLRRGRLSANEVFGNDVAVLVGDYMFAKAIYI 122

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++         + +Q +  +     L      Q+  I D  + E + F I   KT +L+ 
Sbjct: 123 LAVYGGDKVLKVAAQTVQEMAEGELL------QLEKIGDINLTEEEYFDIIYRKTASLLS 176

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             CE G I+  A + E++ L+ +G+ +G  FQL DD  D   D  
Sbjct: 177 TCCEVGGIVGEAREEERKALKNYGKFIGYAFQLVDDAFDYISDEK 221


>gi|313159079|gb|EFR58454.1| putative geranyltranstransferase [Alistipes sp. HGB5]
          Length = 324

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 17/224 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++ L QT    +    +RL + I Y+L  GGK++R  L+     +F      AL   A
Sbjct: 11  AIENYLAQTEFPAE---PERLYAPIGYSLAGGGKRLRPMLLMLAHGIFTDRFQAALPAAA 67

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E  H ++L+HDD+  MDN  +RRGKP+V+ ++    AI++G+ ++  A+ ++S    +
Sbjct: 68  AVEVFHNFTLLHDDI--MDNAAVRRGKPSVYAKWGPSVAILSGDAMMICAYRLLSEVPAE 125

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACE 194
           L   I        T N     +  GQ  D+  E    +   +   + ++KT  L+  +  
Sbjct: 126 LLPRILG------TFNTMALEVCEGQQYDMDFESKRKVSVVEYMHMIELKTSVLLAGSIT 179

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
            GA++  AS+ +  +LR F   LG+ FQL DDLLD   D  L K
Sbjct: 180 IGAMLGGASEEDCRKLRRFAIELGLAFQLQDDLLDSYGDDRLGK 223


>gi|260581709|ref|ZP_05849506.1| heptaprenyl diphosphate synthase component II [Haemophilus
           influenzae NT127]
 gi|260095302|gb|EEW79193.1| heptaprenyl diphosphate synthase component II [Haemophilus
           influenzae NT127]
          Length = 329

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPETSEANYMRVIYSKTARLFEVAGQAAAIVAGGTEVQEKALQDYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|228978217|ref|ZP_04138594.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis Bt407]
 gi|228781234|gb|EEM29435.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis Bt407]
 gi|326939231|gb|AEA15127.1| farnesyltransferase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 320

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|315613297|ref|ZP_07888206.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296]
 gi|315314532|gb|EFU62575.1| geranyltranstransferase [Streptococcus sanguinis ATCC 49296]
          Length = 291

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YSLIAQA--DLPSQIKVNLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|260436153|ref|ZP_05790123.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109]
 gi|260414027|gb|EEX07323.1| solanesyl diphosphate synthase [Synechococcus sp. WH 8109]
          Length = 323

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S + E  + ++T L+ LL    S +   H     +A      GGK++R  +V   +   +
Sbjct: 2   STVTELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     R+    E IH  SL+HDD+  +D    RRG  TVH ++D   A++AG+ L
Sbjct: 62  AQGELSPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFDARVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYR------FDTAQTFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  +C +  +++  S ++ + L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSCRAAGVLSGCSPSQLDSLYQFGRQLGLAFQVVDDILDFTG 222


>gi|168484957|ref|ZP_02709902.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC1873-00]
 gi|168493127|ref|ZP_02717270.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC3059-06]
 gi|221231906|ref|YP_002511058.1| geranyltranstransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225854677|ref|YP_002736189.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae JJA]
 gi|172041911|gb|EDT49957.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC1873-00]
 gi|183576658|gb|EDT97186.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC3059-06]
 gi|220674366|emb|CAR68915.1| putative geranyltranstransferase [Streptococcus pneumoniae ATCC
           700669]
 gi|225722931|gb|ACO18784.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae JJA]
          Length = 291

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++ +I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQIIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|57168796|ref|ZP_00367927.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228]
 gi|305432462|ref|ZP_07401624.1| geranyltranstransferase [Campylobacter coli JV20]
 gi|57019843|gb|EAL56526.1| geranyltranstransferase (ispA) [Campylobacter coli RM2228]
 gi|304444501|gb|EFM37152.1| geranyltranstransferase [Campylobacter coli JV20]
          Length = 279

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 78/223 (34%), Positives = 122/223 (54%), Gaps = 12/223 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVGAA 78
           L++ L +  S      N+ L   ++    GGK  R+ L+         +    AL    A
Sbjct: 9   LENHLPKVQS-FHPFFNEALAKMLK---AGGKHFRAQLLLGVVQNKAPHLIPNALNAALA 64

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH YSLIHDDLP+MDN  +RRG PT+H  YDE TAI+ G+ L T AF ++S+    L
Sbjct: 65  LEFIHTYSLIHDDLPAMDNADLRRGTPTLHKSYDETTAILVGDALNTEAFLLLSNLN--L 122

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESG 196
           K++I+  L+ +L  N G+ GM+ GQ +D   +D+ ++  ++  +   KT  L+  A + G
Sbjct: 123 KESIKINLIRTLAFNAGINGMILGQAIDCYFEDKKLNLEELEFLHTHKTAKLIAAALKMG 182

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
             +    + E E++   G  LG+IFQ+ DD++D    EE+  K
Sbjct: 183 CEICELDEKESEKIYQIGLKLGLIFQINDDIIDETMSEEESGK 225


>gi|91070145|gb|ABE11067.1| polyprenyl synthetase [uncultured Prochlorococcus marinus clone
           HF10-11A3]
          Length = 327

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +  
Sbjct: 8   VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 67

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 68  FCLTSKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 125

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D     ++       KT
Sbjct: 126 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 179

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  + ++  +++  +      L  FG+N+G+ FQ+ DD+LD   
Sbjct: 180 ASLIANSSKAAGVLSGLNDEHLTSLYDFGKNIGLAFQVVDDILDFTG 226


>gi|73540584|ref|YP_295104.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134]
 gi|72117997|gb|AAZ60260.1| farnesyl-diphosphate synthase [Ralstonia eutropha JMP134]
          Length = 294

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 9/235 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
              S ++    R +  LD  L    +         L  A+RYA+LGG K++R  LV    
Sbjct: 3   EFASWMRAQGARTEAALDQTLPNADT-----VPHTLHEAMRYAVLGGGKRVRPLLVHAAG 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   +         A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+ 
Sbjct: 58  EVTGASAEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMI 180
           L T AF +++  ++ ++   R +L+  L    G  GM GGQ +D+Q+  + +    +  +
Sbjct: 118 LQTQAFIVLAQAQS-VQAEARLKLVAELAVASGSVGMAGGQAIDLQNVGKAMSRDALEAM 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +MKTGAL+  +   GA+           L  +   +G+ FQ+ DD+LD   D  
Sbjct: 177 HRMKTGALLRASVRMGALCGEIDAQGLSALDRYAAAVGLAFQVVDDILDVTADTA 231


>gi|218233341|ref|YP_002366295.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           B4264]
 gi|228957889|ref|ZP_04119629.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229178021|ref|ZP_04305393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           172560W]
 gi|229189695|ref|ZP_04316709.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
           10876]
 gi|296502183|ref|YP_003663883.1| farnesyltransferase [Bacillus thuringiensis BMB171]
 gi|218161298|gb|ACK61290.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           B4264]
 gi|228593744|gb|EEK51549.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
           10876]
 gi|228605509|gb|EEK62958.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           172560W]
 gi|228801805|gb|EEM48682.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|296323235|gb|ADH06163.1| farnesyltransferase [Bacillus thuringiensis BMB171]
          Length = 320

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|163939429|ref|YP_001644313.1| heptaprenyl diphosphate synthase component II [Bacillus
           weihenstephanensis KBAB4]
 gi|229010921|ref|ZP_04168117.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM
           2048]
 gi|229058249|ref|ZP_04196637.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH603]
 gi|229132421|ref|ZP_04261275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST196]
 gi|229166460|ref|ZP_04294216.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH621]
 gi|163861626|gb|ABY42685.1| Heptaprenyl diphosphate synthase component II [Bacillus
           weihenstephanensis KBAB4]
 gi|228617034|gb|EEK74103.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH621]
 gi|228651127|gb|EEL07108.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST196]
 gi|228720113|gb|EEL71697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH603]
 gi|228750321|gb|EEM00151.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides DSM
           2048]
          Length = 320

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 DAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|218896543|ref|YP_002444954.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           G9842]
 gi|228964588|ref|ZP_04125697.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218541188|gb|ACK93582.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           G9842]
 gi|228795122|gb|EEM42619.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 320

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|228900194|ref|ZP_04064426.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis IBL 4222]
 gi|228859464|gb|EEN03892.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis IBL 4222]
          Length = 320

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|148977829|ref|ZP_01814384.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3]
 gi|145962898|gb|EDK28169.1| octaprenyl-diphosphate synthase [Vibrionales bacterium SWAT-3]
          Length = 323

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLALLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++++  +     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTTLGS-----LRILELMSEAVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GAI+  +S   +  ++ +G+ LG  FQL DD++
Sbjct: 155 NPDTTEESYMQVIYSKTARLFEAATQIGAILTESSPEIETAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYTAD-GKE 222


>gi|329929813|ref|ZP_08283489.1| putative heptaprenyl diphosphate synthase component II
           [Paenibacillus sp. HGF5]
 gi|328935791|gb|EGG32252.1| putative heptaprenyl diphosphate synthase component II
           [Paenibacillus sp. HGF5]
          Length = 324

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 9/210 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +         +  L     + L  GGK++R   V       + +      V   +E
Sbjct: 15  DVIERELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDIDKLKHVAVPLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+   RRGKPTV  ++D   A+  G+ +   A ++ +  K     
Sbjct: 75  LIHSASLVHDDV--IDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALQLTTHLKQPEIH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I ++ M+ ++           Q+ D  +   D  +  +  + KT  L+  +C+ GA+ A
Sbjct: 133 QILAKAMVEMSIGE------MEQIRDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A +     L  FG N+G+ FQ+ DDLLD 
Sbjct: 187 DADRKVANSLYRFGYNVGMAFQIQDDLLDL 216


>gi|259046628|ref|ZP_05737029.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175]
 gi|259036793|gb|EEW38048.1| geranyltranstransferase [Granulicatella adiacens ATCC 49175]
          Length = 301

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 79/229 (34%), Positives = 120/229 (52%), Gaps = 12/229 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           + + +Q+  + +   L  L+ +  +        RL  A+ YA+  GGK+IR  L     S
Sbjct: 11  VKAVIQQLQQDVANHLTKLIEERPTEA------RLKEAMLYAVQSGGKRIRPLLTLAVGS 64

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                +  AL +  A+E IH YSLIHDDLP MD+  +RRG+PTVH  +DE TAI+AG+ L
Sbjct: 65  AGTSTNKAALDLACALEMIHTYSLIHDDLPGMDDDDMRRGRPTVHKAFDEATAILAGDAL 124

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQ 181
           LT AFE+ ++   + +  + +  +LS     G+ GM+ GQM DI  E   I   ++  I 
Sbjct: 125 LTLAFEVAANANLEARQLVEAVKILS--SASGMSGMISGQMKDIASEEVTITLERMKEIH 182

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           + KTG L+  A   G +        KE    +  + G+ FQ+ +DL D 
Sbjct: 183 REKTGELLLAAVRLGNLFVD-DAKMKEAFVSYATHFGLAFQIQNDLQDV 230


>gi|319892460|ref|YP_004149335.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162156|gb|ADV05699.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464437|gb|ADX76590.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           pseudintermedius ED99]
          Length = 318

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 16/229 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           L +  K+I+  L  L+    S +Q+  +  L S       GGK++R   V   + +  N 
Sbjct: 6   LNQEIKKIENTLKQLIQSEDSTLQSAADHLLSS-------GGKRVRPLFVILSSYVGENP 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +  A RV  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL  A
Sbjct: 59  ANDAAYRVATALELIHMATLVHDDV--IDFSDKRRGKLTIEKKWDQPTAILTGNFLLARA 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E +S  +       R    LS       +G L       + E    T        KT  
Sbjct: 117 LEHLSYIQDS-----RIHQTLSHAIIEVCRGELFQFQDQFRAEQ-SITNYLRRINRKTAL 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           LM  A E GA+ +H       ++R  G ++G+ FQ+ DD+LD      K
Sbjct: 171 LMQLATEVGAMSSHTDDPTIRKMRDIGHHIGMSFQIVDDVLDFTSTEKK 219


>gi|149912227|ref|ZP_01900805.1| octaprenyl-diphosphate synthase [Moritella sp. PE36]
 gi|149804686|gb|EDM64738.1| octaprenyl-diphosphate synthase [Moritella sp. PE36]
          Length = 323

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 15/227 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           +Q  SK+    +++L+L      + Q +  L++ + Y ++  GGK+IR  + T  A    
Sbjct: 6   IQALSKQDMDAVNELIL-----ARLQSDVALVNQVGYYIVNGGGKRIRPLIATLSARALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + V A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + 
Sbjct: 61  YQGQQHVDVAAIIEFIHTSTLLHDDV--VDESDMRRGRKTANAAFGNAASVLVGDFLYSR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +F++++       +N +   +LS   N+  +G +  Q+++  D   DE +   +   KT 
Sbjct: 119 SFQMMAKL-----NNSKIIDILSDATNVIAEGEVL-QLMNCNDADTDEKRYMDVIYYKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L   A +  A++A    + ++ +  +G +LG  FQL DD++D   D
Sbjct: 173 KLFEAATQLAAVIAEQPADIEQAMIDYGVHLGAAFQLIDDVMDYTSD 219


>gi|149012256|ref|ZP_01833325.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75]
 gi|149019197|ref|ZP_01834559.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72]
 gi|168486528|ref|ZP_02711036.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC1087-00]
 gi|168491126|ref|ZP_02715269.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC0288-04]
 gi|147763582|gb|EDK70517.1| GTP-binding protein LepA [Streptococcus pneumoniae SP19-BS75]
 gi|147931067|gb|EDK82046.1| GTP-binding protein LepA [Streptococcus pneumoniae SP23-BS72]
 gi|183570476|gb|EDT91004.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC1087-00]
 gi|183574440|gb|EDT94968.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CDC0288-04]
          Length = 291

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|226951590|ref|ZP_03822054.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) [Acinetobacter sp. ATCC 27244]
 gi|294651249|ref|ZP_06728577.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837665|gb|EEH70048.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) [Acinetobacter sp. ATCC 27244]
 gi|292822902|gb|EFF81777.1| octaprenyl-diphosphate synthase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 347

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A      N   A  + A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 67  AGGKRMRPIMCLLAARACGLTNMQQAQHLAAVIEMLHTATLVHDDV--VDESNLRRGRPT 124

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              + L    + G   +  G++L 
Sbjct: 125 ANATWNNQTAVLVGDFLIARAFDLLVDLNN---------MTLLKDFSTGTCEIAEGEVLQ 175

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A  ++  +E LR F  + G  FQ+
Sbjct: 176 LQSQHQPDTTEEIYLNIIHGKTSRLFELATEGAAILAG-TEEYREPLRRFAGHFGNAFQI 234

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 235 IDDILDYTSDAE 246


>gi|222834545|gb|EEE73022.1| predicted protein [Populus trichocarpa]
          Length = 309

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + +D ++   L      ++ Q  + ++ A      GGK++R  ++   A  F+       
Sbjct: 2   RAVDAVIRRRLSSEVPLIE-QIGEYIIGA------GGKRLRPVILLLSARAFDYEGHRHH 54

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + AF+++  
Sbjct: 55  ELAAVVEFIHTATLLHDDV--VDESELRRGRDTANAVFGNAASVLVGDFLYSRAFQMMVE 112

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             +     +R   +LS   N+  +G +  Q+L++ D  +   +   + + KT  L   + 
Sbjct: 113 AGS-----MRIMEILSNATNVIAEGEVL-QLLNMHDPEVTVERYLQVIRYKTAKLFEASA 166

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + GA++A A    +E    +G  +G  FQL DD+LD   
Sbjct: 167 QLGAVLAGADAEMEEAAAEYGRRIGTAFQLIDDMLDYTA 205


>gi|229102217|ref|ZP_04232926.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-28]
 gi|228681118|gb|EEL35286.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-28]
          Length = 320

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E +++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECVTNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|294626299|ref|ZP_06704902.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666655|ref|ZP_06731892.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292599445|gb|EFF43579.1| octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603561|gb|EFF46975.1| Octaprenyl-diphosphate synthase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 332

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 25  AAVDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHH 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 78  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 136 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             GA+ + AS+  +++L  +G  LG  FQ+ADD+LD      DL K
Sbjct: 190 RLGALASGASEQVQQQLYDYGMQLGFAFQIADDVLDYAAEASDLGK 235


>gi|254526364|ref|ZP_05138416.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT
           9202]
 gi|221537788|gb|EEE40241.1| solanesyl diphosphate synthase [Prochlorococcus marinus str. MIT
           9202]
          Length = 323

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+L+  + +   H     +A      GGK++R  +V   +   +  
Sbjct: 4   VTELLQPVENDLDDLILELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISPE 63

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 64  FCLTSKHKRLAEITEMIHTASLVHDDV--VDEAATRRGVDTVHSRFNTRVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D     ++       KT
Sbjct: 122 QASWHLANLDNVNVVKLLSRVIMDLAEGEI------KQNLNRFDSAQSFSKYINKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +C++  +++  +      L  FG+N+G+ FQ+ DD+LD   
Sbjct: 176 ASLIANSCKAAGVLSEINDENLTSLYEFGKNIGLAFQVVDDILDFTG 222


>gi|222151368|ref|YP_002560524.1| component B of hexaprenyl diphosphate synthase [Macrococcus
           caseolyticus JCSC5402]
 gi|222120493|dbj|BAH17828.1| component B of hexaprenyl diphosphate synthase [Macrococcus
           caseolyticus JCSC5402]
          Length = 325

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 18/234 (7%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            + LQ     ++  L  L+   ++ +         +++     GGK++R   V     L 
Sbjct: 7   KAFLQPYIYEVEQRLQTLIQSESTVITN-------ASMHILNSGGKRVRPMFVLLSGFLA 59

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  +R   ++E IH  SL+HDD   +DN   RRG  +VH+ +++ TAI  G+ LL 
Sbjct: 60  KGEKEHLIRTAVSLELIHMASLVHDD--YIDNSDKRRGNTSVHMAFNKDTAIRTGHFLLA 117

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A E I+         I S+ +L +            QM D  +  I  T+       KT
Sbjct: 118 RALENIAEINDSQYHQIFSKTILEVCFGE------FDQMADRFNYPITFTEYLRRINRKT 171

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
             L+  +C  GA+  +        ++ FG  +G+ +Q+ DD+LD   D   L K
Sbjct: 172 AILIEASCHLGAVSTNLDSYTTYHVKQFGHCIGMSYQIIDDILDYTSDEVTLGK 225


>gi|157803653|ref|YP_001492202.1| octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel]
 gi|157784916|gb|ABV73417.1| Octaprenyl-diphosphate synthase [Rickettsia canadensis str. McKiel]
          Length = 327

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 109/220 (49%), Gaps = 14/220 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           +   L+E   +++ ++   L      ++      LL A      GGK+IR  L    A +
Sbjct: 7   IQQDLKEEVTKLNNLIISCLKSDEGLIEIVG-KYLLEA------GGKRIRPLLTIITAKM 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F+      +++ +A+E IH  +L+HDD+  +D+  +RR KPT ++ +   T+I+ G+ L 
Sbjct: 60  FDYKGDNHIKLASAVEFIHTATLLHDDV--VDDSTLRRFKPTANVIWGSKTSILVGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + +F+++ +  +     I++  +L+    I  +G +   +   +   I   +   I K K
Sbjct: 118 SQSFKLMVAAGS-----IKAMNILAKASAIISEGEVVQLVKLNERRIITIDEYQQIVKSK 172

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           T  L   +C+ GAI+A    +  + ++ FG+ LG IFQ+ 
Sbjct: 173 TAELFGASCKVGAIIAEQVDHVSKDMQDFGKLLGTIFQVI 212


>gi|46203612|ref|ZP_00051268.2| COG0142: Geranylgeranyl pyrophosphate synthase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 312

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L    +   A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 30  GGKRLRPILTLACADLCGYGDGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 87

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 88  RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 141

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   + E+   R +G NLGI FQL DD+
Sbjct: 142 KNTETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPEAEQVACRAYGMNLGIAFQLIDDV 201

Query: 228 LDCEE 232
           LD   
Sbjct: 202 LDYGG 206


>gi|46579760|ref|YP_010568.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449175|gb|AAS95827.1| geranylgeranyl diphosphate synthase [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 287

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 4/205 (1%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
             RL SA+ Y+LL GGK++R  L    A +  ++ ++ +   AAIE IH YSLIHDDLP+
Sbjct: 20  PPRLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPA 79

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+P+ H Q+DE TAI+AG+GLLT AF++++S    +        +  ++   
Sbjct: 80  MDDDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAA 139

Query: 155 GLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           G  GM+GGQ LD+     + ID   +  +  MKTGAL+  +C +GA++  A  +  E++ 
Sbjct: 140 GSSGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVAGALLGGAPASAVEQVA 199

Query: 212 CFGENLGIIFQLADDLLDCEEDLPK 236
            +G  +G  FQ+ DD+LD   D  +
Sbjct: 200 GYGAAIGAAFQIVDDILDETGDEAQ 224


>gi|152986216|ref|YP_001346444.1| geranyltranstransferase [Pseudomonas aeruginosa PA7]
 gi|150961374|gb|ABR83399.1| geranyltranstransferase [Pseudomonas aeruginosa PA7]
          Length = 295

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 75/236 (31%), Positives = 121/236 (51%), Gaps = 10/236 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +       R+D  LD L +     +      RL  A+RY+++ GGK++R  L      
Sbjct: 2   IAAYQARCQARVDGALDALFVAPREELH-----RLYQAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL
Sbjct: 57  ALQGEAQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
              AFE+++  +   ++      ML+      G  GM+GGQ +D+      +D+  + ++
Sbjct: 117 QALAFEVLADGRRNPQEPTVCLEMLTHLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KTGAL+  +   GA+ +  A       L  + + +G+ FQ+ DD+LD E D  
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEAATLAALERYAQAIGLAFQVQDDILDVESDTA 232


>gi|110636883|ref|YP_677090.1| geranyltranstransferase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279564|gb|ABG57750.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 325

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 12/223 (5%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           + +  D+    +     +    L   IRY + LGGK++R  L      +F  +    +  
Sbjct: 6   ERLTKDISKAISKAEFGKEPTELYEPIRYIMDLGGKRMRPLLTILSNYIFTEDTNNVMNA 65

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E  H ++L+HDD+  MDN  +RRGK TVH +++   AI++G+ +L  A++ + +  
Sbjct: 66  AIAVEVFHNFTLMHDDI--MDNAPLRRGKATVHAKWNTNIAILSGDVMLVEAYKQLMTI- 122

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFA 192
               D    + +L   +     G+  GQ  D+  E    I       + ++KT  L+ F+
Sbjct: 123 ----DEKYLKQVLDRFNETAA-GVCEGQQFDMNFESLPTISVDDYINMIRLKTAVLLGFS 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            E G I+  A +     L   G + GI FQL DDLLD   D  
Sbjct: 178 MELGGILGDADEKSCTYLNTVGISAGIGFQLKDDLLDVYGDAA 220


>gi|193216089|ref|YP_001997288.1| polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193089566|gb|ACF14841.1| Polyprenyl synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 324

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 10/228 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           + E  + + + L+    +    M ++    L     Y L   GK+IR  LV   A L   
Sbjct: 3   INEVIRPVKSELELFRTKFKDAMASEVG-LLNKVASYILKQKGKQIRPALVLLSAKLVGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +    R  A +E +H  +L+HDD+  +D   +RRG P V+  +    A++ G+ LL   
Sbjct: 62  VNEGTYRAAALVELLHTATLVHDDV--VDTADMRRGLPAVNALWKNKVAVLMGDYLLARG 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             +       L  NI S  +  ++    L      Q+   +   IDE   F I   KT +
Sbjct: 120 LLLALQNGDTLFLNIVSDAVRRMSEGELL------QIEKTRHLDIDEETYFKIISDKTAS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+  ACE GA  A   +  ++ LR  GE LG+ FQ+ DD+LD + D  
Sbjct: 174 LISTACELGAASASTDEKVRQSLRDCGEALGLAFQIRDDILDYQGDTK 221


>gi|94986958|ref|YP_594891.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731207|emb|CAJ54569.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 324

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 17/232 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + +++    I+  +   + +  S +Q      L       L  GK++R  L    + LF 
Sbjct: 6   TYIEQELPYINAAIKKSIAELPSSIQPVAEHIL-------LSKGKRLRPMLTILLSRLFG 58

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N      +  ++E +H  +L+HDD+  +DN  +RR   T H  +  V+ I+AG+ LL  
Sbjct: 59  YNEDDIYPLAISVEFLHAATLLHDDV--LDNALLRRNTITAHNLFGTVSTILAGDALLAK 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              ++++   Q      SQ +    H   L   +  Q    +++ I       I   KT 
Sbjct: 117 GNLLVATYGCQKCILTISQALYQTAHGEIL--EIYNQGEIWENKNI----YLEIITGKTA 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
            ++  AC+ GA+ A A+  + +    FG NLGI FQ+ DD LD    +D  K
Sbjct: 171 WVIQAACKVGALKAGATPQQVDVAALFGYNLGIAFQIIDDALDFLPSKDTGK 222


>gi|20429115|emb|CAD24425.1| geranyl-diphosphate synthase [Paracoccus zeaxanthinifaciens]
          Length = 287

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 89/232 (38%), Positives = 137/232 (59%), Gaps = 15/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + ++L E    ++  L+       + +       L  A+RYA+ GGK++R+FLV E A L
Sbjct: 1   MQARLAEIRPLVEAELN-------AAIDALPAGDLSDAMRYAVQGGKRLRAFLVMESARL 53

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             ++   +L V AA+E +H YSL+HDDLP+MD+  +RRG+PTVH+++ E TAI+AG+ L 
Sbjct: 54  HGLDDDASLPVAAAVEALHAYSLVHDDLPAMDDDDLRRGQPTVHVKWTEATAILAGDALQ 113

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           T AF++++ P+    D  R +L+ SL    G  GM+ GQ LDI  E     +D   +  +
Sbjct: 114 TLAFQLLADPRVG-DDAARMRLVGSLAQASGAAGMVWGQALDIAAETSGVPLDLDAIIRL 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           Q  KTGAL+ FA  +G +MA A       L  + + +G+ FQ+ADD+LD E 
Sbjct: 173 QGGKTGALIRFAATAGPLMAGADP---AALDDYAQAVGLAFQIADDILDVEG 221


>gi|315658203|ref|ZP_07911075.1| geranyltranstransferase [Staphylococcus lugdunensis M23590]
 gi|315496532|gb|EFU84855.1| geranyltranstransferase [Staphylococcus lugdunensis M23590]
          Length = 293

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 86/225 (38%), Positives = 137/225 (60%), Gaps = 10/225 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           +++ +LDDL+ Q      ++    L  +++Y++  GGK++R  L+     + N ++   L
Sbjct: 12  QVNQVLDDLIPQ------SKLGTNLEKSMQYSINAGGKRVRPLLLLLTLDMLNKDYQLGL 65

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              AA+E IH YSLIHDDLP+MD+   RRGK T H  + E  A++AG+ LLT AF++IS+
Sbjct: 66  ATAAALEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVFGEWKAVLAGDALLTKAFDVISN 125

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
             TQL ++I+ +L+  L    G  GM+GGQ LD+Q E   +D + +  I + KTGAL+ F
Sbjct: 126 -DTQLDNDIKVKLIQRLAFASGHLGMVGGQALDMQSETQAVDISTLEQIHRAKTGALLTF 184

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A  +   +A  +++  E L  F ++LG++FQ+ DDLLD   +  K
Sbjct: 185 AVMAATDIAQVNEHVAEHLNLFSQHLGLMFQIKDDLLDVYGEESK 229


>gi|165921444|ref|ZP_02219632.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
 gi|165916759|gb|EDR35363.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 334]
          Length = 267

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
             +RI+  L  +L         Q   RL  A+ YA++ GGK+IR          F V+  
Sbjct: 7   YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPA 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                  AIE +HCYSL+HDDLP+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+
Sbjct: 62  QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGAL 188
           ++           ++L+  L +  G  GM GGQ LD++  ++     Q+ ++ ++KTGAL
Sbjct: 122 LARDNN-------TRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGAL 174

Query: 189 MCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
              A E GA+ A    +   ++LR  G  +G+IFQ  DDL D
Sbjct: 175 FSTAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLAD 216


>gi|52143833|ref|YP_082994.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           E33L]
 gi|51977302|gb|AAU18852.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           E33L]
          Length = 323

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 18  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 74

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 75  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 132

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 133 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 186

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 187 IAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 225


>gi|88604119|ref|YP_504297.1| farnesyltranstransferase [Methanospirillum hungatei JF-1]
 gi|88189581|gb|ABD42578.1| geranylgeranyl-diphosphate synthase / farnesyl-diphosphate synthase
           [Methanospirillum hungatei JF-1]
          Length = 320

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 17/231 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L + L++ +  ++++L D      + +    N  L +       GGK++R  L    A 
Sbjct: 2   ELETYLKKTADEVNSLLQDCYGDPKTALSRAANHLLFA-------GGKRLRPALFKLAAD 54

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     ++ G A+E  H ++LIHDD+  MD    RRG+ TVH  + E  AI+AG+ 
Sbjct: 55  AVTPGASQKIMQAGLALEVTHNFTLIHDDI--MDKDVYRRGQKTVHTLWGEPAAILAGDV 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFM 179
           L   AF +I + +      +R+  +L+ T     + +  GQ  D+   + E +   +   
Sbjct: 113 LYARAFFLICNAEAPEGAKVRAISLLART----CEEICEGQQQDMSFEEREDVTRDEYLD 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   KTG L   A   G+++A  S+ + + L  +G  +G  FQ+ DDL+D 
Sbjct: 169 MITKKTGVLYGAAAAIGSLLAGGSEAQVDALYTYGCKIGAAFQIQDDLIDL 219


>gi|148394|gb|AAA21260.1| CrtE [Pantoea agglomerans]
          Length = 302

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 118/235 (50%), Gaps = 12/235 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
           S  ++    ID  L+ LL            D + +A+R  AL  GK+IR  L+   A   
Sbjct: 14  SAAEQLLADIDRRLEQLLPVEGER------DFVGAAMREGALAPGKRIRPMLLLLTARDL 67

Query: 66  N--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              V+H   L +  A+E +H  SLI DD+P MD+  I  G+PTVH QY E  AI+A   L
Sbjct: 68  GCAVSHEGLLDIACAVEMVHAASLILDDMPCMDDAQIVGGRPTVHCQYGEHVAILAAVAL 127

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQ 181
           L+ AF +I+     L    +++ +  L++ IG+QG++ GQ  D    D+      + M  
Sbjct: 128 LSKAFGVIADAD-GLTALAKNRAVSELSNAIGMQGLVQGQFKDLSEGDKRRSAEAILMTN 186

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KT  L C + +  +I+A+AS   ++ L  F  +LG  FQL DDL D   D  K
Sbjct: 187 HFKTSTLFCASMQMASIVANASSERRDYLHRFSLDLGQAFQLLDDLTDGMADTGK 241


>gi|313114145|ref|ZP_07799697.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623554|gb|EFQ06957.1| putative geranyltranstransferase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 293

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 14/229 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLF 65
           + L +    ++T     L + +          +  A RY+L+GG K+IR+ LV     + 
Sbjct: 9   NYLAQAMAALETACGRFLPEES---------EVCRAARYSLMGGGKRIRAVLVLSVCDML 59

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   A +  AA+E +HCYSLIHDDLP MDN  +RRG+P+ H  + E TA++AG+ LLT
Sbjct: 60  GGSMQAAQQFAAAVEMLHCYSLIHDDLPCMDNDDLRRGRPSCHKAFSEATAMLAGDVLLT 119

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKM 183
            AFE +++       ++  Q   +L    G +GM+ GQ LD++ E +   E Q+ +I + 
Sbjct: 120 EAFETVANA--PADASVCVQAARALGAGAGSRGMVYGQELDLKYEALAATEDQLRLIHRN 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTGAL+  A + GA  A A + +   L  +   LG++FQ+ DD+LD   
Sbjct: 178 KTGALINAAIQMGAAAAKADEAQCRVLEQYAYGLGLVFQIVDDVLDVTS 226


>gi|165977439|ref|YP_001653032.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165877540|gb|ABY70588.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 331

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTD-----VDSLEVLKVMSAATNALAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|78212668|ref|YP_381447.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9605]
 gi|78197127|gb|ABB34892.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9605]
          Length = 323

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S + E  + ++T L+ LL    S +   H     +A      GGK++R  +V   +   +
Sbjct: 2   STVTELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     R+    E IH  SL+HDD+  +D    RRG  TVH ++D   A++AG+ L
Sbjct: 62  EQGELSPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFDARVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYR------FDTAQTFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  +C +  +++  +  + + L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSCRAAGVLSGCAPTQLDSLYQFGRQLGLAFQVVDDILDFTG 222


>gi|289579302|ref|YP_003477929.1| trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9]
 gi|289529015|gb|ADD03367.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter italicus Ab9]
          Length = 322

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 19/231 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           N  + S+L E  K ++  + +    +   ++    D + ++       GK +R   V   
Sbjct: 8   NLEIKSELTEVIKIMEKRIKN----SNKSIRNILLDMIYNS-------GKMLRPAFVILA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +    L + AAIE +H  +L+HDD+  +DN  IRR KPT+  +Y +  A+  G+
Sbjct: 57  GKFGEYDREKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKDYAVFIGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L + +F ++S   T       S+++  +           GQ     + +I         
Sbjct: 115 FLFSESFLLLSDNITVSNLKKVSKVVSKICKGEI------GQFESRHNIYITINDYLRRI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT AL   +   GA  +   ++  + L   G N+G+ FQ+ DD+LD   
Sbjct: 169 AAKTAALFALSFYVGAYESKCDESLAKALGSIGYNIGMAFQIIDDILDYTG 219


>gi|118477067|ref|YP_894218.1| heptaprenyl diphosphate synthase, component II [Bacillus
           thuringiensis str. Al Hakam]
 gi|118416292|gb|ABK84711.1| heptaprenyl diphosphate synthase, component II [Bacillus
           thuringiensis str. Al Hakam]
          Length = 323

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 18  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 74

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 75  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 132

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 133 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 186

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 187 IAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 225


>gi|303250376|ref|ZP_07336575.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307253685|ref|ZP_07535552.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650846|gb|EFL81003.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306858921|gb|EFM90967.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 331

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTD-----VDSLEVLKVMSAATNALAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|282882106|ref|ZP_06290747.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B]
 gi|281298136|gb|EFA90591.1| geranyltranstransferase [Peptoniphilus lacrimalis 315-B]
          Length = 289

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 82/237 (34%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 11  ENSKRIDTI---LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           +N + ++TI   LD  L  T +++  +   ++  +++Y+L  GGK+IR  L     +   
Sbjct: 2   KNLEELNTIIGELDSYLSNTFTYVD-ESLAKIYESMKYSLFSGGKRIRPLLCMITYNELA 60

Query: 67  VNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            N      L   A +E IH YSLIHDDLP+MD+  +RR KPT H  Y E  AI+AG+GLL
Sbjct: 61  ENPTLDKILPFAATLEMIHTYSLIHDDLPAMDDDDLRRDKPTNHKVYSEAVAILAGDGLL 120

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLS----LTHNIGLQGMLGGQ--MLDIQDEFIDETQVF 178
             + E+IS     L D    +  +     + +  G+ GM+GGQ   +D  +E  +E    
Sbjct: 121 NMSMEVISKYMESLDDIDELKKCIKALKFIYNCSGVLGMIGGQLLDIDYLNEQYNEELCE 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  +KT AL+  +  +GAIMA        +L+ FG+ +G+ +Q  DDLLD  +DL 
Sbjct: 181 DMYSLKTAALLKASIVTGAIMAGCEGEIITKLKEFGQYIGLAYQYKDDLLDMNKDLK 237


>gi|117921658|ref|YP_870850.1| polyprenyl synthetase [Shewanella sp. ANA-3]
 gi|117613990|gb|ABK49444.1| Polyprenyl synthetase [Shewanella sp. ANA-3]
          Length = 331

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       D++R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQEAALGDYGKYLGTAFQLTDDLL 222

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 223 DYTADSE 229


>gi|46143904|ref|ZP_00133901.2| COG0142: Geranylgeranyl pyrophosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209449|ref|YP_001054674.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           L20]
 gi|307258100|ref|ZP_07539852.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|126098241|gb|ABN75069.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|306863463|gb|EFM95394.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 331

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTD-----VDSLEVLKVMSAATNALAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|183600352|ref|ZP_02961845.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827]
 gi|188020143|gb|EDU58183.1| hypothetical protein PROSTU_03915 [Providencia stuartii ATCC 25827]
          Length = 323

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +          +    ++V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAGRSLGYSGQKHIQVAALIEFIHTATLLHDDV--VDESDMRRGKQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AVFGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I E     +   KT  L   A  + AI+A A+  +++ L+ +G  LG  FQL DDLL
Sbjct: 155 DPNITEENYMQVIYSKTARLFEAAAHASAILASATPEQEKALQDYGRYLGTAFQLIDDLL 214

Query: 229 DCEED---LPK 236
           D + D   L K
Sbjct: 215 DYDADNKQLGK 225


>gi|15553717|gb|AAL01998.1|AF408847_1 geranylgeranyl diphosphate synthase [Xanthobacter autotrophicus
           Py2]
          Length = 359

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           ID  L  L+   ASH        L +A+R+ LL  GK++R  L    A   N +    L 
Sbjct: 75  IDRRLGLLVPPAASH-----PAVLHAAMRHILLSPGKRLRPLLTLAAAIQLNASEHAVLD 129

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            G A+E IH  SLI DDLP MD+  +RR +PT H+QY E  A++A  GLL+ AF  +++ 
Sbjct: 130 FGCALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFG-VAAA 188

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFAC 193
              + +  R + +  L+  +G  G+ GGQ  D++       +    + + KTG L   A 
Sbjct: 189 APGVSERARLEAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATEDVNRRKTGVLFSAAV 248

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-------DLPK 236
           E    +A A + +   L+    ++G  +Q+ DD+LD          D+ K
Sbjct: 249 EIAGHVAAADETQMGHLKALAGHVGRAYQILDDILDASASSASLGKDVGK 298


>gi|257439493|ref|ZP_05615248.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165]
 gi|257198065|gb|EEU96349.1| geranyltranstransferase [Faecalibacterium prausnitzii A2-165]
          Length = 227

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 10/228 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
           + QE   R +  L     + A          +  A RY+LLGG K+IR+ LV     + N
Sbjct: 6   QYQEYLARANQAL-----EKACETFLPEESEVCRAARYSLLGGGKRIRAVLVLAVCDMLN 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A +  AA+E +HCYSLIHDDLP MDN  +RRGKP+ H  + E TA++AG+ LLT 
Sbjct: 61  GSAEAAEQFAAAVEMLHCYSLIHDDLPCMDNDDLRRGKPSCHKAFGESTAMLAGDVLLTE 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMK 184
           AF ++++        +  Q   +L    G  GM+ GQ LD++ E +   E Q+ +I + K
Sbjct: 121 AFNVVANA--PASPIVSVQAAKALGAGAGSHGMVYGQELDLKYEALAATEEQLRLIHRNK 178

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           TGAL+  A + GA  A A++ + + L  +   +G++FQ+ DD+LD   
Sbjct: 179 TGALINAAVQMGAAAAQANETQCKELEDYAFGIGLVFQIVDDVLDVTS 226


>gi|188582542|ref|YP_001925987.1| polyprenyl synthetase [Methylobacterium populi BJ001]
 gi|179346040|gb|ACB81452.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
          Length = 351

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L    +   A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 69  GGKRLRPILTLACADLCGYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 126

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 127 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 180

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G +++   + E+   R +G NLGI FQL DD+
Sbjct: 181 KNTETSEDEYLAVIRGKTAELFAAACEVGPVLSQRPEAEQAACRAYGMNLGIAFQLIDDV 240

Query: 228 LDCEE 232
           LD   
Sbjct: 241 LDYGG 245


>gi|261854792|ref|YP_003262075.1| trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2]
 gi|261835261|gb|ACX95028.1| Trans-hexaprenyltranstransferase [Halothiobacillus neapolitanus c2]
          Length = 325

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK+ R  ++   A         A ++ A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 45  AGGKRFRPMVLMLAAQALGGTSPWAAQMAAVVELIHTATLLHDDV--VDESTLRRGRDTA 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + AFE++   +       R   +L+   N   +G +  Q++++
Sbjct: 103 NALFGNAASVLTGDFLYSRAFEMMVEVQ-----EPRVMAILAQATNRIAEGEVL-QLMNM 156

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  + E +   +   KT  L   A +  A++    +  +  L  +G +LG  FQL DD+
Sbjct: 157 GDADVSEDRYVDVIVRKTATLFAAATQLAAVLEGQPEEVEAALTAYGLHLGTAFQLIDDV 216

Query: 228 LDCEEDLP 235
           LD   D  
Sbjct: 217 LDYTGDEA 224


>gi|312112946|ref|YP_004010542.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218075|gb|ADP69443.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 308

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 127/233 (54%), Gaps = 12/233 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M G L   +   +K I++ L +L+            D L  ++R++LL   K++R+ L  
Sbjct: 1   MGGQLDVYMMLRAK-IESRLAELVRLDGPL------DPLQGSLRHSLLAPAKRVRAVLTL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A         AL +  A+E IH  SLI DDLP MDN   RRG P+ H  + E TAI+A
Sbjct: 54  VAARELGGRESDALDLACAVEMIHTSSLILDDLPCMDNAATRRGIPSNHRVFGEATAILA 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQV 177
             GL+  A+  +++   +L  + R++ +  L  ++GL+G++ GQ  D+ D    ++E Q+
Sbjct: 114 SIGLMNRAYG-VAAASAKLSADQRAEAVGVLEWSVGLEGLVRGQHDDLADYRATMNEAQL 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +   KTGAL   A E GAI+A+ +Q  +  +R FG +LG+ FQ+ DD+LD 
Sbjct: 173 ETMYAQKTGALFAAAAECGAIVAN-NQAARPAMRKFGLDLGVGFQILDDVLDA 224


>gi|241664241|ref|YP_002982601.1| polyprenyl synthetase [Ralstonia pickettii 12D]
 gi|240866268|gb|ACS63929.1| Polyprenyl synthetase [Ralstonia pickettii 12D]
          Length = 325

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + + E+ + +D ++   L      +  Q  + ++SA      GGK++R  ++   A+ 
Sbjct: 9   LLAPVAEDMRAVDAVIRRRLGSEVV-LINQIGEYIISA------GGKRLRPVILLLVANA 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L 
Sbjct: 62  LGYKGEHQHELAAVVEFIHTATLLHDDV--VDESDLRRGRKTANAVFGNAASVLVGDFLY 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + AF+++    +     +R   +L+   NI  +G +  Q+L++ D  + E +   + + K
Sbjct: 120 SRAFQMMVQANS-----MRIMQILADATNIISEGEVL-QLLNMHDPDVTEERYLQVIRYK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+++ A    +E    +G  +G  FQ+ DDLLD   
Sbjct: 174 TAKLFEAAAQIGAVLSGAGAAIEEAAAEYGRRIGTAFQIIDDLLDYTS 221


>gi|228951990|ref|ZP_04114087.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228807715|gb|EEM54237.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 305

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 11/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  A
Sbjct: 1   MIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVA 57

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +   
Sbjct: 58  LELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPE 115

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                S  +L +            Q+ D  +   +        K KT  L+  +C+ GAI
Sbjct: 116 AHQALSHTILEVCKGEI------EQIKDKYNYNQNLRTYLRRIKRKTALLIAASCQLGAI 169

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 170 AAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 207


>gi|229172251|ref|ZP_04299815.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3]
 gi|228611239|gb|EEK68497.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus MM3]
          Length = 320

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|113969238|ref|YP_733031.1| trans-hexaprenyltranstransferase [Shewanella sp. MR-4]
 gi|113883922|gb|ABI37974.1| Trans-hexaprenyltranstransferase [Shewanella sp. MR-4]
          Length = 331

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       D++R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DSMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A A+  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPNTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEQETALGDYGKYLGTAFQLTDDLL 222

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 223 DYTADSE 229


>gi|239636857|ref|ZP_04677856.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           warneri L37603]
 gi|239597531|gb|EEQ80029.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           warneri L37603]
          Length = 319

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 25/237 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTEC 61
            + +++++  KR++  +                D++L    + LL  GGK++R   V   
Sbjct: 5   NMNNEIKKVEKRLEQAI-------------HSQDKVLEEAAFHLLSSGGKRVRPAFVILS 51

Query: 62  ASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           +             +V  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAII 
Sbjct: 52  SQFGKEEGVSEDTYKVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAIIT 109

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           GN LL    + +S  K +    I S+ ++ +            Q  D  +     T    
Sbjct: 110 GNFLLALGLQHLSEIKDKRVHEILSESIVDVCRGE------LFQFQDQFNSQQTMTNYLR 163

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               KT  L+  A E GAI A +      +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 164 RINRKTALLIQLATEVGAITAGSDIKTIHKLKMIGHYIGMSFQIVDDILDFTSTEKK 220


>gi|206890930|ref|YP_002249297.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742868|gb|ACI21925.1| octaprenyl-diphosphate synthase [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 322

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 19/241 (7%)

Query: 1   MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   +    +   + ++  L ++    A+ + T     + S       GGK++R   + 
Sbjct: 1   MNFQDIFKTYEAELREVEKELINIFKSDATLIPTIGAYIINS-------GGKRLRPLFLL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L        + + A IE +H  SL+HDD+  +D   +RRG+ + +  +     ++ 
Sbjct: 54  ISADLAGYREYKRVIMAAVIEALHTASLLHDDV--VDEAELRRGQVSANRIWGNQVTVLL 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   A  +     +  +++++    LS   +   +G +  Q++   D  I   +   
Sbjct: 112 GDYLYAKALHV-----SVAQESLQIMEALSWATSQMAEGEIL-QLMKAGDPTITFNEYIK 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           I   KT  L+  AC    I+A  S+ + + L  FG N+G+ FQ+ DD+LD   D   L K
Sbjct: 166 IITGKTAGLIRAACRIAGILAKLSEEKIQALTDFGHNIGVAFQMIDDILDYVADESELGK 225

Query: 237 K 237
           K
Sbjct: 226 K 226


>gi|86147820|ref|ZP_01066126.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222]
 gi|85834347|gb|EAQ52499.1| octaprenyl-diphosphate synthase [Vibrio sp. MED222]
          Length = 323

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          +   A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPLLALLSARALGYQGEAHITSAAFIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F+++++  +     +R   ++S + N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDFIYTRSFQMMTTLGS-----LRILELMSESVNVIAEGEV-QQLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     +   KT  L   A + GAI+  ++   +  ++ +G+ LG  FQL DD++
Sbjct: 155 NPDTTEESYMQVIYSKTARLFEAATQIGAILTESTPEIETAMQNYGKYLGTAFQLIDDVM 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYTAD-GKE 222


>gi|167043397|gb|ABZ08099.1| putative Polyprenyl synthetase [uncultured marine microorganism
           HF4000_APKG1C9]
          Length = 575

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 30  HMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            +     +RL  A+ +   GG K++R+ +           H     +GA+IE IH ++L+
Sbjct: 270 SLGKMQQERLHGAMTHLFAGGGKRLRAIIPRLVGEAVGEAHDGHYTLGASIEIIHNFTLV 329

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D   IRRG   VH+ YD+ TAI AG+ +L   FEI++       D +     L
Sbjct: 330 HDDI--IDQDPIRRGLDAVHVAYDDATAINAGDAMLAVGFEILAESPEIDADKLA---FL 384

Query: 149 SLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             T    ++ +  GQ  DI+ E    + E     +   KT A+      +GAI+A AS  
Sbjct: 385 VSTIGEMVRKVAEGQQDDIEFEQRNTVTEEDYIAMITGKTSAMFETCATTGAILAGASDE 444

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + +  +G NLG+ FQL DDL+D   D  
Sbjct: 445 IVDNMAIWGLNLGLCFQLMDDLIDITGDTE 474


>gi|161527795|ref|YP_001581621.1| polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339096|gb|ABX12183.1| Polyprenyl synthetase [Nitrosopumilus maritimus SCM1]
          Length = 283

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 15/219 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  K+ID  LD         +        +  ++Y+L GGK+IR  ++T  A        
Sbjct: 17  EYIKKIDQALD-------KELDLYSESEFIEPLKYSLEGGKRIRPIILTLSAESIGKVDD 69

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                  A+E +H  S+IHDD+  +DN  +RR K   HI+Y   T+++ G+ +L     +
Sbjct: 70  NTFAASCAVEFLHMESIIHDDI--IDNETMRRQKDPFHIKYGYNTSVLTGDFVLGLILAV 127

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
            S       DN R    L+ T  +  +G +    L+   E +       + + KT     
Sbjct: 128 CSRL-----DNPRITKDLATTAMLMSEGEMIENRLET-SEDVTFDDYLKVIEYKTATAFE 181

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            A  +GAI+A+ ++ + E L  +G+N+GI +Q+ DDLLD
Sbjct: 182 VAARTGAIIANGTEEQIEGLTEYGKNIGIAYQIRDDLLD 220


>gi|154707047|ref|YP_001424692.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111]
 gi|154356333|gb|ABS77795.1| dimethylallyltransferase [Coxiella burnetii Dugway 5J108-111]
          Length = 267

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
             +RI+  L  +L         Q   RL  A+ YA++ GGK+IR          F V+  
Sbjct: 7   YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPA 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                  AIE +HCYSL+HDDLP+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+
Sbjct: 62  QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGAL 188
           ++           ++L+  L +  G  GM GGQ LD++  ++     Q+ ++ ++KTGAL
Sbjct: 122 LARDNN-------TRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGAL 174

Query: 189 MCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
              A E GA+ A    +   ++LR  G  +G+IFQ  DDL D
Sbjct: 175 FSTAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLAD 216


>gi|42780715|ref|NP_977962.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC
           10987]
 gi|42736635|gb|AAS40570.1| heptaprenyl diphosphate synthase component II [Bacillus cereus ATCC
           10987]
          Length = 320

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  D   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYDYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|153208848|ref|ZP_01947072.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212218667|ref|YP_002305454.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154]
 gi|120575699|gb|EAX32323.1| polyprenyl synthetase family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212012929|gb|ACJ20309.1| dimethylallyltransferase [Coxiella burnetii CbuK_Q154]
          Length = 267

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
             +RI+  L  +L         Q   RL  A+ YA+  GGK+IR          F V+  
Sbjct: 7   YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVRSGGKRIRPLFTYATGFSFEVDPA 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                  AIE +HCYSL+HDDLP+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+
Sbjct: 62  QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGAL 188
           ++           ++L+  L +  G  GM GGQ LD++  ++     Q+ ++ ++KTGAL
Sbjct: 122 LARDNN-------TRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGAL 174

Query: 189 MCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
              A E GA+ A    +   ++LR  G  +G+IFQ  DDL D
Sbjct: 175 FSTAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLAD 216


>gi|161830715|ref|YP_001597105.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
 gi|212212363|ref|YP_002303299.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212]
 gi|161762582|gb|ABX78224.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 331]
 gi|212010773|gb|ACJ18154.1| dimethylallyltransferase [Coxiella burnetii CbuG_Q212]
          Length = 267

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 81/222 (36%), Positives = 119/222 (53%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
             +RI+  L  +L         Q   RL  A+ YA++ GGK+IR          F V+  
Sbjct: 7   YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPA 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                  AIE +HCYSL+HDDLP+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+
Sbjct: 62  QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGAL 188
           ++  K        ++L+  L +  G  GM GGQ LD++  ++     Q+ ++ ++KTGAL
Sbjct: 122 LARDKN-------TRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGAL 174

Query: 189 MCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
              A E GA+ A    +   ++LR  G  +G+IFQ  DDL D
Sbjct: 175 FSTAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLAD 216


>gi|91785273|ref|YP_560479.1| octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400]
 gi|91689227|gb|ABE32427.1| Octylprenyl-diphosphate synthase [Burkholderia xenovorans LB400]
          Length = 330

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+ ++++ ++   L      +  Q ++ ++SA      GGK++R  L+   A
Sbjct: 12  ASLLAPIAEDMQQVNRVIRHRLASDVM-LINQISEYIISA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++          +R   +LS   NI  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A + GA++A +    +     FG  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAAQLGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTG 226


>gi|113952964|ref|YP_730756.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311]
 gi|113880315|gb|ABI45273.1| solanesyl diphosphate synthase [Synechococcus sp. CC9311]
          Length = 323

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGK++R  +V   +   +
Sbjct: 2   ATVTELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +        R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  ADGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVETVHSRFNYRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFR------FDTGQSFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  + ++  +++  S+ + E L  +G  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSAKAAGVLSGLSEPQLESLYHYGRQLGLAFQVVDDILDFTG 222


>gi|331266229|ref|YP_004325859.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5]
 gi|326682901|emb|CBZ00518.1| farnesyl diphosphate synthase [Streptococcus oralis Uo5]
          Length = 291

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L++       +   Q    L  A+ Y++  GGK+IR FL+ E     +V 
Sbjct: 4   QEKLALVESALENF------YGDQQFASSLREAVLYSIHAGGKRIRPFLLLEVLESLHVT 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IRPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|190151351|ref|YP_001969876.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251769|ref|ZP_07337940.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307246933|ref|ZP_07528998.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249070|ref|ZP_07531077.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251268|ref|ZP_07533189.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255915|ref|ZP_07537716.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307260368|ref|ZP_07542075.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307264706|ref|ZP_07546286.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189916482|gb|ACE62734.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302649199|gb|EFL79384.1| octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306852218|gb|EFM84458.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306854358|gb|EFM86554.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306856784|gb|EFM88919.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861183|gb|EFM93176.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865619|gb|EFM97500.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306870018|gb|EFN01782.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 331

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESDMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTD-----VDSLEVLKVMSAATNALAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|95929474|ref|ZP_01312217.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM
           684]
 gi|95134590|gb|EAT16246.1| Trans-hexaprenyltranstransferase [Desulfuromonas acetoxidans DSM
           684]
          Length = 322

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 12/224 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +R+  +L++ +       +   +     +     Y L  GGK++R  LV  CA L     
Sbjct: 2   ERVLQMLEEEMALVEQQFRQDLDSEVTLIRKVGEYVLASGGKRMRPMLVLLCARLAAYQG 61

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            + + V + +E IH  +L+HDD+  +D+  +RRG  + +  +    +++ G+ L + +F 
Sbjct: 62  ESHIGVASVVEFIHTATLLHDDV--VDSADLRRGAASANNVWGNEASVLVGDFLFSKSFS 119

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I+    +     +     LS       +G +  Q++   D  + E +   + + KT  L+
Sbjct: 120 IMVRTGS-----LPILQALSDATTNMAEGEVL-QLISTCDLDLSEERYMQVVRDKTAVLI 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             AC  G I+   S  +++ L+ FG  LGI FQ  DD LD   D
Sbjct: 174 AAACRCGGILGGVSAEQEQALQEFGMELGIAFQFMDDALDYVAD 217


>gi|70726445|ref|YP_253359.1| heptaprenyl diphosphate syntase component II [Staphylococcus
           haemolyticus JCSC1435]
 gi|68447169|dbj|BAE04753.1| heptaprenyl diphosphate syntase component II [Staphylococcus
           haemolyticus JCSC1435]
          Length = 318

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            + S+++   KR+   ++             ++  L  A  + L  GGK++R   V   +
Sbjct: 5   NMNSEIKNVEKRLQKAIES------------NDPILREASSHLLSSGGKRVRPAFVILSS 52

Query: 63  SLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                       RV  A+E IH  +L+HDD+  +D    RRG+ T+  ++D  TAI+ GN
Sbjct: 53  QFGPQKKTEDTYRVAVALELIHMATLVHDDV--IDKSDKRRGRLTIVKKWDVTTAILTGN 110

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL    E +S     ++DN    ++ +   N+GL  +   Q  D  +     T      
Sbjct: 111 FLLALGLEHLSE----IRDNRIHHIISNSIVNVGLGELFQFQ--DQFNSEQSITNYLRRI 164

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KT  L+  A E GAI + A+     +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 165 NRKTALLIQLATEVGAITSEANDETIRKLKMIGHYIGMSFQIVDDILDFTSTEKK 219


>gi|322375371|ref|ZP_08049884.1| geranyltranstransferase [Streptococcus sp. C300]
 gi|321279634|gb|EFX56674.1| geranyltranstransferase [Streptococcus sp. C300]
          Length = 291

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 12/230 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD   +  
Sbjct: 176 GKLLAYPFQAAAIIAELAPEIQAKLKTVGELIGLAFQVRDDVLDVTANFE 225


>gi|148244492|ref|YP_001219186.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326319|dbj|BAF61462.1| octaprenyl-diphosphate synthase [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 323

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 22/240 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTE 60
             + S ++ + K+ D IL + L    +         L++ + + +   GGK++R  L+  
Sbjct: 5   SDIQSLIKLDLKKTDEILINRLSSNVA---------LINQMSHYIIHAGGKRLRPLLLLL 55

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           CA            +   IE IH  +L+HDD+  +D    RRGK TV+  +    +I+ G
Sbjct: 56  CARATGYQGTHHYLMAVVIELIHTATLLHDDI--VDESSTRRGKDTVNEVWGNAPSILVG 113

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L + AFEI+  P       +    +LS T N   +G +  Q+L+ Q++ + E + + +
Sbjct: 114 DFLYSRAFEIMVEPNL-----MSIMCILSKTTNNIAEGEVL-QLLNCQNDELTEVEYYAV 167

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            K KT  L   A + G +++  ++ ++  L+ +G +LG  FQ+ DD+LD E D   + K+
Sbjct: 168 IKQKTACLFQAATQIGGLLSAVNKTQETALKNYGLHLGNAFQIIDDVLDYESDAKTIGKE 227


>gi|88808408|ref|ZP_01123918.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805]
 gi|88787396|gb|EAR18553.1| Trans-hexaprenyltranstransferase [Synechococcus sp. WH 7805]
          Length = 323

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGK++R  +V   +   +
Sbjct: 2   ATVTELLQPVEADLEILLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRGLS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PEGELSPRHRRLAEITEMIHTASLVHDDV--VDEAGTRRGVETVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDNLDVVKLLSRVIMDLADGEVKQGLFR------YDTGQTFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  +  +  +++  ++ + E L  +G  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSARAAGVLSGCTEPQLESLYHYGRQLGLAFQVVDDILDFTG 222


>gi|228907246|ref|ZP_04071106.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis IBL 200]
 gi|228852386|gb|EEM97180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis IBL 200]
          Length = 320

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|332363439|gb|EGJ41222.1| geranyltranstransferase [Streptococcus sanguinis SK355]
          Length = 291

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YKSQQVSPDLSEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  TEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|258543735|ref|ZP_05703969.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826]
 gi|258521019|gb|EEV89878.1| geranyltranstransferase [Cardiobacterium hominis ATCC 15826]
          Length = 315

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 86/231 (37%), Positives = 123/231 (53%), Gaps = 13/231 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           +   L     RI+T L   L    +        RL  A+RYA L GGK++R+ L+   A 
Sbjct: 29  MTEPLARYQTRIETALSRALPPAGA--------RLADAMRYATLGGGKRLRAALLYATAD 80

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F V   +      A+E IH YSLIHDDLP+MD+  +RRG+P+ H  +DE TAI+AG+ L
Sbjct: 81  DFGVPPDSVDAAACAVEAIHAYSLIHDDLPAMDDDDLRRGRPSTHRAFDEATAILAGDAL 140

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQ 181
            T AF ++++  + L    R   + +L    G  GM+GGQM D+    + +   Q+  I 
Sbjct: 141 NTLAFALLAN--SPLPPATRLAQIQTLADAAGWAGMIGGQMGDMAATGKTLTLPQLQAIH 198

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL+  A   GA+ A         L   GE+LGI +Q+ADD+LD   
Sbjct: 199 RGKTGALIRAALHLGALPAADYAAHAATLDELGEHLGIAYQIADDILDATA 249


>gi|158523240|ref|YP_001531110.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
 gi|158512066|gb|ABW69033.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
          Length = 327

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 17/234 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           + G + S++  + + I+T L D L        T + D++     + L  GGK++R  L+ 
Sbjct: 5   LRGYIFSRVAGDMEAIETALADNL--------TPYFDKVREIAGHILFTGGKRVRPLLMV 56

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            CA L   +     RV    E +H  +L+HDD+  +D   +RRG P  H+ +D  +A++ 
Sbjct: 57  LCARLCRYDGSDDKRVSVMFEYLHTATLLHDDI--VDGAAMRRGSPAAHVVWDPASAVLV 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  +  I           I    +L+       QG +  Q+    +  + E +   
Sbjct: 115 GDFLLARSASIAVDTG-----RIALMKILADILEDMSQGEIH-QLARKGNVNLSEAEYRT 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KT  LM  AC SGAI+A AS      L  +G NLG+ FQ+ DDLLD   D
Sbjct: 169 IILHKTAVLMEGACRSGAILAGASDAHARALADYGRNLGMAFQMIDDLLDYTAD 222


>gi|149002571|ref|ZP_01827503.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69]
 gi|237649510|ref|ZP_04523762.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CCRI 1974]
 gi|237822542|ref|ZP_04598387.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Streptococcus pneumoniae CCRI 1974M2]
 gi|147759182|gb|EDK66175.1| GTP-binding protein LepA [Streptococcus pneumoniae SP14-BS69]
          Length = 291

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPKMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|120599984|ref|YP_964558.1| trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1]
 gi|146292082|ref|YP_001182506.1| trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32]
 gi|120560077|gb|ABM26004.1| Trans-hexaprenyltranstransferase [Shewanella sp. W3-18-1]
 gi|145563772|gb|ABP74707.1| Trans-hexaprenyltranstransferase [Shewanella putrefaciens CN-32]
          Length = 331

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARTVSYEGDAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       DN+R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DNMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A AS  ++  L  +G+ LG  FQL DDLL
Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASTEQETALGNYGKYLGTAFQLTDDLL 222

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 223 DYTADTE 229


>gi|253998309|ref|YP_003050372.1| polyprenyl synthetase [Methylovorus sp. SIP3-4]
 gi|253984988|gb|ACT49845.1| Polyprenyl synthetase [Methylovorus sp. SIP3-4]
          Length = 295

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 9/234 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
              +   +   R++ +LDD+L             RL  A+RYA+LGG K++R+ L     
Sbjct: 2   DFNAWSLDIQTRMERVLDDILPAANII-----PSRLHGAMRYAVLGGGKRVRALLAHAAG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                      +  AA+E IH YSL+HDD+P MD+  +RRGKP+ H QYD+ TA++ G+ 
Sbjct: 57  EFCQAPISAVEQSAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMI 180
           L T AF++++ P        +  ++  L    G +GM GGQ +D+    +D  +T++  +
Sbjct: 117 LQTLAFKVLAEPGLLRDAARQLHMVHILAMASGSRGMAGGQAIDLASVGLDLTQTELEQM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTGAL+  A   GA  A     +  + +  + + +G+ FQ+ DD+LD E D
Sbjct: 177 HIHKTGALIRAAALLGAESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEAD 230


>gi|332203057|gb|EGJ17125.1| ispA protein [Streptococcus pneumoniae GA47901]
          Length = 291

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTASFEEIGK 229


>gi|330994653|ref|ZP_08318576.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1]
 gi|329758294|gb|EGG74815.1| Octaprenyl-diphosphate synthase [Gluconacetobacter sp. SXCC-1]
          Length = 334

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 12/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M  G    L++ ++ +   +          M +        A      GGK++R  L   
Sbjct: 1   MADGSEVALRDLAEYLADDMAACNRAIVERMDSPVALIPQLAAHLVAAGGKRLRPLLTLA 60

Query: 61  CASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            A L            + + A +E IH  +L+HDD+  +D   +RRG  + +  +    +
Sbjct: 61  SARLCGYQPDATHQRHVGLAACVEFIHTATLLHDDV--VDESSLRRGMASANAVFGNKAS 118

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L   +F++++   +     ++   +LS       +G +  QM    D      Q
Sbjct: 119 VLVGDFLFARSFQLMTDDGS-----LKVMNILSSASATIAEGEVL-QMSTQNDLSTRIDQ 172

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +   KT AL   AC  GA++A   +  +  L  +G NLG+ FQL DD LD   D  +
Sbjct: 173 YLEVIHGKTAALFAAACRVGAVVAERDETVERALESYGTNLGMAFQLVDDALDYAADQAR 232


>gi|225181669|ref|ZP_03735109.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167650|gb|EEG76461.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 320

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 10/211 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L +  S + T     +    +Y L   GK+IR  L     +L+       L V  A+E I
Sbjct: 14  LEEELSLILTSQEPVVQEINKYLLETPGKRIRPALFFLSLALWKEEPQEHLSVAVALELI 73

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D   +RRGKP+++  +   TA++ G+ L   AFE+++          
Sbjct: 74  HSATLVHDDV--VDASKVRRGKPSINEAWGNHTAVLTGDYLFARAFELLTEYGNISLIKE 131

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH- 201
            S L+  ++           Q        +D          KT        +SG I+A  
Sbjct: 132 MSALVRDMSEGEI------QQQAQRFCTDLDIKNYLQRIAKKTARFFMVCAKSGGIVARP 185

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   L  +G N+G+ FQL DDLLD   
Sbjct: 186 QDTEAICALENYGYNVGMAFQLIDDLLDVTG 216


>gi|325106523|ref|YP_004276177.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
 gi|324975371|gb|ADY54355.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
          Length = 323

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 11/231 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL E  K I+  +D    +  + M++     L     Y +   GK+IR   V   A++  
Sbjct: 3   KLDEIKKPIEKEIDAFEEKFKASMKSSVP-LLDRITHYIVKRKGKQIRPMFVFFSANISG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
               +       +E +H  +L+HDD+  +DN + RRG  +V+  +    A++ G+ LL  
Sbjct: 62  GITESTYHAATFVELLHTATLVHDDV--VDNSFERRGFFSVNALWKNKIAVLVGDYLLAK 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +    +   +  I S  +  L+    L      QM  ++   I E   + + + KT 
Sbjct: 120 GLLLSVDHQEFKQLKIVSDAVQQLSEGELL------QMEKVRRMDISEEVYYEVIRKKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
           +L+   C +G+  A A+    +++  FGE +GI FQ+ DDL D   +D+ K
Sbjct: 174 SLIASCCAAGSTSAGATDEIVKKMHDFGEKIGIAFQIKDDLFDFGTDDIGK 224


>gi|103487675|ref|YP_617236.1| polyprenyl synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977752|gb|ABF53903.1| farnesyl-diphosphate synthase [Sphingopyxis alaskensis RB2256]
          Length = 306

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 95/234 (40%), Positives = 135/234 (57%), Gaps = 8/234 (3%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           L +   E ++ ID + D LL      +       L  A+RYA + GGK++R  LV     
Sbjct: 15  LRATQAEVAEGIDALFDQLLA-----VPADPRGPLYEAMRYAAIAGGKRLRPLLVRAAGD 69

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LF+V+    LRVGAA+E +H YSLIHDDLP MD+  +RRGKPT H  + E TA++AG+ L
Sbjct: 70  LFHVDRALTLRVGAAVEAMHVYSLIHDDLPCMDDDDMRRGKPTTHKAFGEATAVLAGDSL 129

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
              AFE +  P T     +R++L   L    G  GM GGQM+D+  E    D   V  +Q
Sbjct: 130 HALAFEWLCDPATSADPFVRAELCCELARAAGPAGMAGGQMMDLAAETSDFDLPTVTRLQ 189

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++KTGAL+ F+ E+GAI+A      +  LR +  ++G+ FQ+ADD++D E D  
Sbjct: 190 QLKTGALIAFSVEAGAILARIPAEGRRPLRGYARDIGLAFQIADDIMDVEGDEA 243


>gi|114327555|ref|YP_744712.1| decaprenyl diphosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315729|gb|ABI61789.1| farnesyl pyrophosphate synthetase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 353

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 106/240 (44%), Gaps = 21/240 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            GL + +Q++    +  + D +      +          A      GGK++R  L    A
Sbjct: 27  SGLIALVQDDLTLCNQAIIDRMDSQVPLIPQL-------AAHIVAAGGKRLRPLLTLASA 79

Query: 63  SLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            L   +   A      + + A +E IH  +L+HDD+  +D   +RRG  + +  +    +
Sbjct: 80  RLCGFDTALAGGVPRHVHLAACVEFIHTATLLHDDV--VDESRMRRGMASANAVFGNNAS 137

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L   AF+++    +     ++   +LS       +G +  Q+    D    E++
Sbjct: 138 VLVGDFLFARAFQLMVEDGS-----LQVLAILSKAAATIAEGEVL-QLATQNDLETPESR 191

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              + + KT +L   AC+ GA++A     E++ L  +G +LGI FQL DD LD   D  K
Sbjct: 192 YLEVIEGKTASLFAAACQVGAVVAARPAEEEQALYDYGMSLGIAFQLTDDALDYAADQRK 251


>gi|116749021|ref|YP_845708.1| trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698085|gb|ABK17273.1| Trans-hexaprenyltranstransferase [Syntrophobacter fumaroxidans
           MPOB]
          Length = 323

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 17/236 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   + S++Q + +RI+  ++ LL  +   +            RY +  GGK++R  L+ 
Sbjct: 1   MKESIISRIQPDLRRIEEEIELLLTTSVPLISVVG--------RYIMGSGGKRLRPLLLV 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L          +    E IH  SL+HDD+  +D+   RR +P  +  +     ++ 
Sbjct: 53  LSARLCGYQGSHDASLAVVFEFIHAASLLHDDV--VDHAKFRRNRPAANTVWGNQAVVLV 110

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + A  +     +     +R   +LS       +G +  Q++   +  I E +   
Sbjct: 111 GDFLYSKAIHLTVGYNS-----LRMLEVLSEATTRMSEGEVL-QLVHADNIEISEEEYIE 164

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   KT  L+  AC+ GA+        ++ L+ +G NLGI FQL DD LD   D+ 
Sbjct: 165 VITRKTAVLISAACQIGALFGGNDVQREKALKTYGHNLGIAFQLVDDTLDYTGDVK 220


>gi|229016870|ref|ZP_04173798.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1273]
 gi|229023076|ref|ZP_04179590.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1272]
 gi|228738222|gb|EEL88704.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1272]
 gi|228744431|gb|EEL94505.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1273]
          Length = 320

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 DAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|13476175|ref|NP_107745.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099]
 gi|14026935|dbj|BAB53531.1| octaprenyl-diphosphate synthase [Mesorhizobium loti MAFF303099]
          Length = 338

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAAQMFGYAGEGHVKLATSVEFMHTATLLHDDV--VDESGMRRGKKTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS   +I  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E + F + K KT AL   A E G ++A A++N++  LR +G NLG+ FQL DD L
Sbjct: 169 NLETTEDEHFAVIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDAL 228

Query: 229 DCEE---DLPK 236
           D      DL K
Sbjct: 229 DYGGTSKDLGK 239


>gi|67921668|ref|ZP_00515186.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501]
 gi|67856780|gb|EAM52021.1| Trans-hexaprenyltranstransferase [Crocosphaera watsonii WH 8501]
          Length = 323

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 12/214 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---TALRVGAA 78
           LL      +    +  L +A  +    GGK+IR  +V   +    ++        R+   
Sbjct: 17  LLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDLEITSRHRRLAEI 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +++     
Sbjct: 77  TEMIHTASLVHDDV--VDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNLQ 134

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              + S+++         QG+      +  D  +           KT +LM  + +S AI
Sbjct: 135 VVKLLSEVIRDFAEGEIFQGI------NRFDTSLTLEAYLDKSYYKTASLMANSSKSAAI 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ AS    + L  +G+ LG+ FQ+ DD+LD   
Sbjct: 189 LSDASAEVIDSLYNYGKYLGLAFQIVDDILDFTS 222


>gi|83951988|ref|ZP_00960720.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM]
 gi|83836994|gb|EAP76291.1| farnesyl diphosphate synthase [Roseovarius nubinhibens ISM]
          Length = 287

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 86/232 (37%), Positives = 132/232 (56%), Gaps = 15/232 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           +  +L E +  +   LD +L    +         L  A+RYA  GGK++R++LV E A L
Sbjct: 1   MQERLAEVAAGVAAHLDHVLAPFGT-------GELAQAMRYATEGGKRLRAYLVIEGARL 53

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V    A+    AIE +H YSL+HDD+P MD+  +RRG+PTVH ++DE TA++ G+ L 
Sbjct: 54  HGVPAEQAIWPATAIEALHAYSLVHDDMPCMDDDDLRRGRPTVHRKWDEATAVLVGDALQ 113

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           + AFE ++ P+      +R++L L L    G QGM+ GQ LDI  E     +   ++  +
Sbjct: 114 SLAFECVADPRAG-SGEVRAELCLGLARAAGGQGMVLGQALDIAAETAGTPLSLDEITTL 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           Q  KTGAL+ ++  +GA+MA A       L  + + +G+ FQ+ADD+LD E 
Sbjct: 173 QAGKTGALIIWSGIAGAVMAGADPA---PLTRYAQAVGLAFQIADDILDVEG 221


>gi|172057807|ref|YP_001814267.1| polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990328|gb|ACB61250.1| Polyprenyl synthetase [Exiguobacterium sibiricum 255-15]
          Length = 320

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 18/224 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +D  L   +  +   +       L +       GGK+IR   V   +     +    +RV
Sbjct: 17  VDQFLIRHIASSDPTIDAAGQQLLQA-------GGKRIRPAFVLLASKFGQADRDELVRV 69

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A++E +H  SL+HDD+  +D+  +RRGKPTV   +DE  A+ +GN L   A ++I    
Sbjct: 70  AASLELVHMASLVHDDV--IDDAELRRGKPTVMQHFDEEVALYSGNFLFGEAVKLIGEVG 127

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                      ++        +G +  Q+ D  D      +     + KT  L+  +C  
Sbjct: 128 KPE-----LVQVMVHAMREICEGEIE-QIYDQYDWEQSIKRYIKRIERKTAILIEASCHL 181

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           GAI+A+ S  + + LR FG ++G+ FQ+ADDLLD      +L K
Sbjct: 182 GAIVANCSPEDTKALRQFGRDIGLAFQIADDLLDFTAKRTELGK 225


>gi|307564820|ref|ZP_07627348.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
 gi|307346542|gb|EFN91851.1| polyprenyl synthetase [Prevotella amnii CRIS 21A-A]
          Length = 326

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 12/222 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHL 70
            + I++ L+D +    S +   H D LL+ + + +   GGK++R  L+   A  F     
Sbjct: 8   KRPIESELNDFIDLFNSSL--DHEDGLLTQVLHHIKQRGGKRMRPILILLIAKSFGKVSP 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           T       +E +H  SLIHDD+  +D    RRG+ +V+  Y+   A++ G+ +L+ A + 
Sbjct: 66  TTQHAAVGLELLHTASLIHDDV--VDESNERRGQASVNASYNNKVAVLVGDYVLSTALQQ 123

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +    +       ++L  +L+    L      Q+ +I+ E I E     I   KT  L  
Sbjct: 124 VGYTNSNSIVKYLAELGQTLSDGEIL------QLSNIKREEITEAAYLEIIARKTAILFE 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                GA  A  S+ +    R FG+N+G+IFQ+ DD+ D  E
Sbjct: 178 ICAAIGAESAGVSEEDVALARAFGKNIGMIFQIRDDIFDYFE 219


>gi|229160564|ref|ZP_04288559.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           R309803]
 gi|228622974|gb|EEK79805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           R309803]
          Length = 320

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E +++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECVTNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + A++    RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IASGANRETVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|158338022|ref|YP_001519198.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017]
 gi|158308263|gb|ABW29880.1| trans-octaprenyltranstransferase [Acaryochloris marina MBIC11017]
          Length = 323

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 11/220 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TA 72
           ++  L  L+      ++ QH     +A      GGK++R  +V   +     +       
Sbjct: 11  VEADLAILVDNLKDLVRAQHPVLFAAAEHLFQAGGKRMRPAIVLLLSRALLPDQDLTPRH 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D+  +RRG P+VH  +    AI AG+ L   A   ++
Sbjct: 71  RRLAEITEMIHTASLLHDDV--VDDSGVRRGVPSVHSLFGNRIAIQAGDFLFAQASWYLA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +        + S+++               Q ++  D  +           KT +LM  +
Sbjct: 129 NLDNLEVVKLLSEVIKDFAEGEI------QQGINCFDTSLTLEAYLEKSYYKTASLMANS 182

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++  +++  S    + L  +G  +G+ FQ+ DD+LD   
Sbjct: 183 AKAAGVLSGTSLQVNQDLYAYGRCVGLAFQIVDDILDFTG 222


>gi|49184441|ref|YP_027693.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Sterne]
 gi|49481018|ref|YP_035730.1| heptaprenyl diphosphate synthase component II [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49178368|gb|AAT53744.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Sterne]
 gi|49332574|gb|AAT63220.1| heptaprenyl diphosphate synthase component II [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 323

 Score =  178 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 18  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 74

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 75  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 132

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 133 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 186

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 187 IAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 225


>gi|114324644|gb|ABI63627.1| solanesyl diphosphate synthase [Solanum lycopersicum]
          Length = 398

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 16  IDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDLL   +   ++    N  L+SA       GGK++R  LV       A +  + 
Sbjct: 80  FEVVADDLLTLNKNLHNIVGAENPVLMSAAEQIFGAGGKRVRPALVFLVSRATAEMSGLK 139

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D    RRGK T+H  Y    A++AG+ +   
Sbjct: 140 ELTTNHRRLAEIIEMIHTASLIHDDV--LDESDTRRGKETIHQLYGTRVAVLAGDFMFAQ 197

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +   +++ +      + SQ++               Q  ++ D  +   +  +    KT 
Sbjct: 198 SSWYLANLENLEVIKLISQVIKDFASGEI------KQASNLFDCDVGLDEYLLKSYYKTA 251

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +    +  E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 252 SLIAASTKGAAIFSEVGSDISEQMFQYGRNLGLSFQIVDDILDFTQ 297


>gi|58040424|ref|YP_192388.1| decaprenyl diphosphate synthase [Gluconobacter oxydans 621H]
 gi|58002838|gb|AAW61732.1| Decaprenyl diphosphate synthase [Gluconobacter oxydans 621H]
          Length = 315

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 12/190 (6%)

Query: 48  LGGKKIRSFLVTECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            GGK++R  L    + L        +   + + A +E IH  +L+HDD+  +D   +RRG
Sbjct: 29  AGGKRLRPLLTLASSRLCGYKSTPENQRHVGLAACVEFIHTATLLHDDV--VDESNLRRG 86

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             + +  +    +++ G+ L   +F+++++  +     ++   +LS       +G +  Q
Sbjct: 87  LASANAVFGNKASVLVGDFLFARSFQLMTADGS-----LKVMAILSDASATIAEGEVL-Q 140

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           M+   D      +   +   KT AL   AC  GA++A   + E+  L  FG NLG+ FQL
Sbjct: 141 MVTQNDLSTPVDRYLEVIHGKTAALFAAACRVGAVVADRPEAEELALDRFGTNLGMAFQL 200

Query: 224 ADDLLDCEED 233
            DD LD   D
Sbjct: 201 VDDALDYAAD 210


>gi|29654557|ref|NP_820249.1| polyprenyl synthetase family protein [Coxiella burnetii RSA 493]
 gi|29541825|gb|AAO90763.1| dimethylallyltransferase [Coxiella burnetii RSA 493]
          Length = 267

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 81/222 (36%), Positives = 118/222 (53%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
             +RI+  L  +L         Q   RL  A+ YA++ GGK+IR          F V+  
Sbjct: 7   YQERINHKLGSILPDIR-----QTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPA 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                  AIE +HCYSL+HDDLP+MD+   RRGKP+ H  +DE TAI+ G+ L   AFE+
Sbjct: 62  QIDNAACAIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEV 121

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGAL 188
           ++  K         +L+  L +  G  GM GGQ LD++  ++     Q+ ++ ++KTGAL
Sbjct: 122 LARDKN-------IRLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGAL 174

Query: 189 MCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLD 229
              A E GA+ A    +   ++LR  G  +G+IFQ  DDL D
Sbjct: 175 FSTAIELGALAAGCLDEKRLQKLRKLGATVGLIFQWQDDLAD 216


>gi|285017833|ref|YP_003375544.1| octaprenyl-diphosphate synthase [Xanthomonas albilineans GPE PC73]
 gi|283473051|emb|CBA15556.1| putative octaprenyl-diphosphate synthase protein [Xanthomonas
           albilineans]
          Length = 331

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 15/222 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 24  AAVDALIRHRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGRACGSHGPKHH 76

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 77  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 134

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D++    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 135 L-----DSMAVMRLLADTTNRIAEGEVL-QLLHVHNPDTDEAAYLQVIERKTAVLFAAGT 188

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA+ A A+   ++ L  +G +LG  FQ+ADD+LD   D  
Sbjct: 189 RLGALAAGATDAVQQCLYAYGMHLGYAFQIADDVLDYTADAA 230


>gi|159026272|emb|CAO88848.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 323

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           +D  L  LL     ++    +  L +A  +    GGK++R  +V   +    ++      
Sbjct: 11  VDDDL-RLLTDNLKNLVGARHPILAAAAEHLFEAGGKRVRPAIVLLVSRATMLDRDITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDEAELRRSVPTVNSLFDNRVAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S+++               Q ++  D  I           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEI------QQGINRFDTSISLEAYLEKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  S      L  +G NLG+ FQ+ DD+LD   
Sbjct: 182 SAKAAGVLSEQSAEVNHHLYNYGRNLGLAFQIVDDILDFTS 222


>gi|50085967|ref|YP_047477.1| octaprenyl-diphosphate synthase [Acinetobacter sp. ADP1]
 gi|49531943|emb|CAG69655.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter sp. ADP1]
          Length = 325

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A      +     ++ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAAKACGSTDLEQHRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L++ AF+++              ++L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLISRAFDLLVDLN---------DMVLLKDFSTGTCEIAEGEVLQ 153

Query: 167 ---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                D    E     I   KT  L   A E  AI++  +   +E LR F  + G  FQ+
Sbjct: 154 LQSQHDPETTEQTYLNIIHGKTSRLFELATEGAAILSG-TPEYREPLRHFAGHFGNAFQI 212

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 213 IDDILDYTSDAE 224


>gi|209964973|ref|YP_002297888.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum
           SW]
 gi|209958439|gb|ACI99075.1| octaprenyl-diphosphate synthase, putative [Rhodospirillum centenum
           SW]
          Length = 340

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L          + A +E +H  +L+HDD+  +D   +RRG+ + +
Sbjct: 59  GGKRLRPVLTLAAAQLCGYQGTRQTALAACVEFLHTATLLHDDV--VDESDLRRGQASAN 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L   AF+I+    +     +    +L     +  +G +  Q+    
Sbjct: 117 AVFGNKASVLVGDFLFARAFQIMVEDGS-----LDVLRILCTASAVIAEGEVL-QLTTTN 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     + K KT  L   ACE G I+A     E+  LR +G NLGI FQL DD+L
Sbjct: 171 DTDTTEEAYLEVIKAKTAELFAAACELGGIVADRPAVEQAALRSYGMNLGIAFQLVDDVL 230

Query: 229 DCEE 232
           D   
Sbjct: 231 DYSA 234


>gi|326390072|ref|ZP_08211634.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993937|gb|EGD52367.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 322

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 14/230 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASL 64
           K   N+  I   LD+++      ++  +    + LL  IR +   GK +R   V      
Sbjct: 3   KFWNNNLEIKNELDEVIKIMEKRIKNSNRSIRNILLDMIRNS---GKMLRPAFVILSGKF 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +    L + AA+E +H  +L+HDD+  +DN  IRR KPT+  +Y +  A+  G+ L 
Sbjct: 60  GEYDRKRILPLAAAVEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKNYAVFIGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           +  F ++S   T       S+++  +           GQ     +  I           K
Sbjct: 118 SECFLLLSDNITIENLKKVSKVVSRICKGEI------GQFESRYNIDITINDYLKRIAAK 171

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           T AL   +   GA  ++  +   + L   G N+G+ FQ+ DD+LD   + 
Sbjct: 172 TAALFALSFYVGAYESNCGEKLAKILGSIGYNIGMAFQIIDDVLDYTGEE 221


>gi|157363190|ref|YP_001469957.1| polyprenyl synthetase [Thermotoga lettingae TMO]
 gi|157313794|gb|ABV32893.1| Polyprenyl synthetase [Thermotoga lettingae TMO]
          Length = 276

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 8/195 (4%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
            A+ Y+LL  GK+IR  L+        V          A+E  H  SLIHDDLP +D+  
Sbjct: 26  QAMAYSLLSAGKRIRPVLIKLICEDMGVQEDLIWNPAMAVELFHTASLIHDDLPQIDDSP 85

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+P+ H+ +    AI+AG+GL+  AF ++     Q   +  S+ ML    +     +
Sbjct: 86  LRRGRPSCHVVFGNDMAILAGDGLMLMAFCVL----NQTPADPVSKSMLFDLFSKSTYDV 141

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           L G+ +D++      D   V  + + KTGAL  F    GAI+        E+L   G   
Sbjct: 142 LIGEAMDVEFTGKEKDINDVIEMYRKKTGALFSFCFAIGAILMK-KLEYLEKLINVGSTF 200

Query: 218 GIIFQLADDLLDCEE 232
           G+ FQ+ DDL D   
Sbjct: 201 GVWFQIVDDLKDVSG 215


>gi|332981368|ref|YP_004462809.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
 gi|332699046|gb|AEE95987.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
          Length = 282

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 72/230 (31%), Positives = 124/230 (53%), Gaps = 6/230 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
               +L+   + ID  LD++L    +     +   +  A+RY++  GGK++R  L+    
Sbjct: 2   DFNQQLKHKIEIIDKNLDNMLPPADT-----YPPVIHEAMRYSVFSGGKRLRPVLLISAY 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF+ +    + +  AIE IH YSLIHDDLP+MD+   RRGK T H  + E  A++ G+ 
Sbjct: 57  ELFDEHVDDCMPLACAIEFIHTYSLIHDDLPAMDDDDTRRGKATCHKVFGEGIAVLTGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL +AFE++     +   +I + + ++    IG         L  +++ +D+  +  I +
Sbjct: 117 LLNHAFEVMLDDIARNPHHIAAAIAIAKAAGIGGMIGGQVMDLLYENKPVDDGVLQYIHQ 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT AL+C A ++GA+ A A +     +  +G  LG+ FQ++DD+LD +E
Sbjct: 177 HKTAALICAAVKAGALAAGADEVYVRAIEQYGLALGMAFQISDDILDVDE 226


>gi|169831509|ref|YP_001717491.1| trans-hexaprenyltranstransferase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638353|gb|ACA59859.1| Trans-hexaprenyltranstransferase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 318

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 13/224 (5%)

Query: 16  IDTILDDL-LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTA 72
           +D + DDL +++   +   + N++LL+     L   GGK++R  L    A  +N +    
Sbjct: 5   LDVVRDDLDIVERELYAVLKSNNQLLTESSSHLFRAGGKRLRPALALLSAKFYNYDLQKV 64

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +  A+E +H  +L+HDD+  +D   +RRG PTV  ++    ++  G+ LL  A  ++S
Sbjct: 65  LPLAMALELVHLATLVHDDV--VDGAELRRGIPTVKARWGNKVSVHTGDYLLAKAMILVS 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
             ++ +   + +   + +     +Q     Q         D        K KT  L+  A
Sbjct: 123 VYRSPVIIGVLAHSCVKMCEGEIIQFAGLNQC--------DLRDYLRRIKYKTALLIQAA 174

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           C+ GA+   A +   + L  FG  LG+ FQ+ DD+LD   D  +
Sbjct: 175 CQLGAVATGAPRELYKPLGRFGHCLGMAFQITDDILDMVADQKR 218


>gi|304395256|ref|ZP_07377140.1| Polyprenyl synthetase [Pantoea sp. aB]
 gi|304357509|gb|EFM21872.1| Polyprenyl synthetase [Pantoea sp. aB]
          Length = 303

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 79/226 (34%), Positives = 116/226 (51%), Gaps = 12/226 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN--HLTA 72
           I+  LD LL   +        D + +A+R  AL  GK+IR  L+   A     +      
Sbjct: 24  IEQRLDQLLPVESER------DLVGAAMRDGALAPGKRIRPLLLLLAARDLGCDVTPTGL 77

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +  A+E +H  SLI DD+P MD+  +RRG+PT+H QY E  AI+A   LL+ AF +++
Sbjct: 78  LDLACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVA 137

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMC 190
             +  L    R+  +  L+H +G+QG++ GQ  D    D+      + M    KT  L C
Sbjct: 138 MAE-GLTAAARADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILMTNHYKTSTLFC 196

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + +  +I+A AS   +E+L  F  NLG  FQL DDL D   D  K
Sbjct: 197 ASMQMASIVAEASAETREQLHRFSLNLGQAFQLLDDLTDGMADTGK 242


>gi|319941776|ref|ZP_08016098.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804709|gb|EFW01576.1| polyprenyl synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 332

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 20/236 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + + ++ K +D  +   L    S        R+     Y    GGK++R  L+   + 
Sbjct: 17  LLAPIADDMKAVDDYIRAELASDVS--------RMHEISEYITSAGGKRMRPALLILISR 68

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                      +GA IE +H  +L+HDD+  +D   +RRG+PT + ++    A++ G+ L
Sbjct: 69  ALGYKGDLCCYLGATIELLHTATLMHDDV--VDESNLRRGRPTANARWGNGAAVLVGDFL 126

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T +F+++         N+R    L+   N   +G +  QM++  D  +DET+ F + + 
Sbjct: 127 YTRSFQMMVRAG-----NLRVMQALADAANRLSEGEVV-QMVNAHDPSVDETRYFRVIER 180

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L        A +A  S+ ++E +  +   LG  FQ+ADD+LD      D+ K
Sbjct: 181 KTACLFEAGARMAAAIAECSKEQEEAVAQYALALGNAFQIADDILDYTGVAADIGK 236


>gi|319787810|ref|YP_004147285.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466322|gb|ADV28054.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 291

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 83/230 (36%), Positives = 119/230 (51%), Gaps = 10/230 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASL 64
           P      + R +  LD LL        T    RL +A+R+A L GGK++R  LV    + 
Sbjct: 3   PEVFTRWAARTEATLDRLLP-----ADTAEPRRLHAAMRHATLGGGKRMRPLLVYAAGTA 57

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +  +     AA+E +H YSL+HDDLP+MD+  +RRG+PTVH+ +DE TAI+AG+ L 
Sbjct: 58  LGADEASLDLPAAAVELVHAYSLVHDDLPAMDDDDMRRGRPTVHVAFDEATAILAGDALQ 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           T      +         +R+  M SL    G  GM GGQ LDI      +    +  +  
Sbjct: 118 TL--AFEALADAAAPAELRAGWMQSLARASGAGGMCGGQALDIDATGSQLPLEALQRMHS 175

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTGAL+  A   GA+ A A +    +L  + + LG+ FQ+ DDLLD E 
Sbjct: 176 LKTGALIRAAVRMGALGAGADEARLRQLDRYADALGLAFQVRDDLLDIEA 225


>gi|319784751|ref|YP_004144227.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170639|gb|ADV14177.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 338

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAAQMFGYAGEGHVKLATSVEFMHTATLLHDDV--VDESGMRRGKKTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS   +I  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LEALDILSSAASIIAEGEVM-QLAAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E + F + K KT AL   A E G ++A A++N++  LR +G NLG+ FQL DD L
Sbjct: 169 NLETTEDEHFAVIKAKTAALFSAAAEVGPVIAQATRNDRAALRSYGMNLGLAFQLIDDAL 228

Query: 229 DCEE---DLPK 236
           D      DL K
Sbjct: 229 DYGGTSKDLGK 239


>gi|224023511|ref|ZP_03641877.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM
           18228]
 gi|224016733|gb|EEF74745.1| hypothetical protein BACCOPRO_00213 [Bacteroides coprophilus DSM
           18228]
          Length = 324

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 12/227 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + I+  L +      S +++  N  L   + Y     GK +R  LV   A LF   + +
Sbjct: 8   KRPIEKELGEFRELFESSLES-SNPLLGEVLSYIRKRNGKMMRPILVMLMAKLFGHINSS 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L V  ++E +H  SL+HDD+  +D    RRG+ +V+  Y+   +++ G+ +L  +    
Sbjct: 67  TLHVALSLELLHTASLVHDDV--VDESDERRGQSSVNAVYNNKISVLVGDYMLATSLWHA 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +         + ++L  +L+    +      Q+ +I +    E   F + + KT AL   
Sbjct: 125 AHTGKVELVELVARLGQALSEGEII------QLANISNRDFSEDIYFDVIRKKTAALFTA 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
           + ESGA+ A AS+ E  R   FGE +GI FQ+ DD+ D  E  +L K
Sbjct: 179 SAESGALSAGASEEEVSRAADFGEMIGIAFQIKDDIFDYYESPELGK 225


>gi|57234813|ref|YP_181134.1| heptaprenyl diphosphate synthase component II [Dehalococcoides
           ethenogenes 195]
 gi|57225261|gb|AAW40318.1| heptaprenyl diphosphate synthase component II [Dehalococcoides
           ethenogenes 195]
          Length = 324

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 16/237 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             + + + E  K ++   D+   +  S  + Q    +   + Y L+GGK +R  L    A
Sbjct: 5   SSIYAPINEGLKGVE---DEF--KLVSESRKQSFPEMAEMLDYILVGGKVLRPALSMLSA 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       L +  + E +H  +L+HDD  ++D    RR + TV+  +    AI+ G+ 
Sbjct: 60  MCFGTGIKKVLPLATSSEMLHIATLVHDD--AIDKADTRRSRRTVNSVWGLEKAILLGDF 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L  +A E+ +       DN+R   + + T  I   G L  Q     +             
Sbjct: 118 LFAHAAEVAAET-----DNMRIVTLFAQTLQIIASGELK-QAYASFNPDQSYENYLERIS 171

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            KT AL   A + GAI+A AS +++E +R +G NLG+ FQ+ DD+LD      D+ K
Sbjct: 172 GKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGK 228


>gi|319760237|ref|YP_004124175.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318038951|gb|ADV33501.1| octaprenyl-diphosphate synthase [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 324

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 110/220 (50%), Gaps = 12/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLL---SAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           +I+ ++   ++     +  +   ++      I+Y +  GGKKIRS +V   A        
Sbjct: 5   QINKLIQQDIINVNFEIHKRLKSKITLINKLIQYIINSGGKKIRSSMVLLIAKSLTYKKN 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             + +   IE IH  +L+HDD+  +D   +RRGK T +I +    +++ G+ + T AF++
Sbjct: 65  QHVIIATLIEFIHAATLLHDDV--VDTSEMRRGKITANIMFGNAASVLVGDFIYTRAFQM 122

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++  ++     +R   +++   NI  +G +  Q++   D  I       I   KT  L  
Sbjct: 123 MTELQS-----LRILSLMANAVNIIAEGEIM-QLIHCHDPTITINHYMKIIYNKTARLFE 176

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A ++ AI+A+A   +++ L  +G+ +GI FQL DD+LD 
Sbjct: 177 VASQTSAILANADIKQEQALGNYGKYIGIAFQLIDDVLDY 216


>gi|47565976|ref|ZP_00237014.1| heptaprenyl diphosphate syntase component II [Bacillus cereus
           G9241]
 gi|228984692|ref|ZP_04144865.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155179|ref|ZP_04283291.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
           4342]
 gi|47556893|gb|EAL15223.1| heptaprenyl diphosphate syntase component II [Bacillus cereus
           G9241]
 gi|228628306|gb|EEK85021.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus ATCC
           4342]
 gi|228775086|gb|EEM23479.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 320

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|310643237|ref|YP_003947995.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Paenibacillus polymyxa SC2]
 gi|309248187|gb|ADO57754.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)
           [Paenibacillus polymyxa SC2]
          Length = 795

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 12/247 (4%)

Query: 1   MNGGLPSKLQENSKRIDTI------LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKI 53
           M   L +  +E    ++T+      +++ L  T         ++L+ A  Y+L G GK+I
Sbjct: 491 MITHLKNDSREKEDFMNTVKTVRDQINNQLKITKPSGIEAMKEQLIDAANYSLEGDGKRI 550

Query: 54  RSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           R  L      + + ++ L  + +  ++E +H  SLI DDLPS DN   RRG+ T+H  ++
Sbjct: 551 RPILTWVMGVNEYGLDALAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRQTLHQVHN 610

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
             TA + G  L+  A    +S  +Q        L+           M     LD + + +
Sbjct: 611 SATAELTGLYLIQKAIGEQASL-SQFNAETVLALIQYSARKAEDMCMGQAMDLDSKGKAL 669

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              Q+ M+   KTG          A++A   ++E   L+ F  ++GI FQ+ DDLLD E 
Sbjct: 670 TLEQLNMMCFYKTGVAFEACLVMPAMLAQTEESEIAALQKFAYHMGIAFQIKDDLLDVEG 729

Query: 233 D---LPK 236
           D   L K
Sbjct: 730 DTHLLGK 736


>gi|258648864|ref|ZP_05736333.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259]
 gi|260850886|gb|EEX70755.1| octaprenyl-diphosphate synthase [Prevotella tannerae ATCC 51259]
          Length = 326

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 10/228 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           KL E  + I+  L++   +  +   T  +D L  A+ +     GK +R  LV   A  F 
Sbjct: 5   KLAEIRRPIEAELNEY-ARLFAESLTHEDDFLGQALSHMRRRNGKMMRPILVLLAAKAFA 63

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 LR    +E +H  SLIHDD+  +D+   RRG+ +V+  +    A++ G+ LL+ 
Sbjct: 64  PISEKTLRSAVTLELLHTASLIHDDV--VDDSGERRGQASVNALFGNKVAVLVGDYLLSK 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +       +  L D++R   +++       +G +  Q+ +I+     E   F + + KT 
Sbjct: 122 SL-----HQAYLTDDLRIVEIVARLGGTLAEGEVK-QLANIRQSVATEEAYFDVIRHKTA 175

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           AL       GAI A  +    E+   FGE +G+ FQ+ DD+ D  +D 
Sbjct: 176 ALFAACTRLGAISADCAPATVEQAATFGEIIGLCFQIRDDIFDYYDDE 223


>gi|225874396|ref|YP_002755855.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC
           51196]
 gi|225794389|gb|ACO34479.1| octaprenyl-diphosphate synthase [Acidobacterium capsulatum ATCC
           51196]
          Length = 329

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGG-KKIRSFLVTECASLFN 66
             +K I  +L D LL+     +T    R   +     Y   GG K+IR  L+   A   +
Sbjct: 7   ATAKEIFDLLHDDLLEIEREFETAAVSRVQVITEIAEYLREGGGKRIRPLLLLLSARSQS 66

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A R+GA +E +H  +L+HDD+  +D   +RRG+P+ +  +     ++AG+ L   
Sbjct: 67  YRGAGATRLGAVVEMVHTATLVHDDI--IDAADMRRGRPSPNTTWGNAKCVLAGDWLYMQ 124

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF +    +     N R   +L       ++G L    L+     ++  + + +   KT 
Sbjct: 125 AFRVALDER-----NFRVLDLLIGLTQQMVEGELMQ--LETLGRQVNSQEYYDLIYRKTA 177

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L   +   GA++A A+  E+E +  +G NLG+ FQ+ DD+LD   
Sbjct: 178 CLFEVSMRLGAVLAKATDAEEECMGEYGRNLGLAFQIVDDVLDLTA 223


>gi|71083319|ref|YP_266038.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762251|ref|ZP_01264216.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|71062432|gb|AAZ21435.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91718053|gb|EAS84703.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 337

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 19/237 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   + E    ++  +   LL     +Q            +   GGK++R+ L    A L
Sbjct: 18  LKDSVDEKLVLVEEKIKSKLLSDVDLVQKMTE-------YHIDTGGKRLRALLTLGSAKL 70

Query: 65  FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    + + A +E IH  +L+HDD+  +D G IRRGK T++  +   ++++ G+ L
Sbjct: 71  CGYTKGGRDINLAACVEMIHGATLMHDDV--IDLGNIRRGKKTLNSIWGNHSSVLIGDYL 128

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L+  FE++         NI    +LS T +   QG +  Q+    +  + E   F I   
Sbjct: 129 LSRCFEMMVDDG-----NIEVLKLLSSTSSKIAQGEVL-QLQHKGEVDMLEETYFKIITA 182

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
           KT  L   A + GAI+++    EKE L  +G+NLG+ FQ+ADD LD   DL    KK
Sbjct: 183 KTAELFSAATKVGAILSNKETKEKEALEFYGKNLGLTFQIADDTLDYNSDLKFFGKK 239


>gi|294675118|ref|YP_003575734.1| polyprenyl synthetase family protein [Prevotella ruminicola 23]
 gi|294472825|gb|ADE82214.1| polyprenyl synthetase family protein [Prevotella ruminicola 23]
          Length = 324

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 14/233 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
            L    K ID  +++ +      +   H + +L  I   +   GGK++R  LV   A   
Sbjct: 3   YLSTIRKPIDGDMNNFVELFKQSL--THGEGMLEQILKHIRERGGKRMRPMLVFLTARNL 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                        +E +H  SL+HDD+  +D    RRG+P+V+  Y+   A++ G+ +L+
Sbjct: 61  GEISDVTQNAALGLELLHTASLVHDDV--VDESSERRGQPSVNAAYNNKVAVLVGDYILS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   ++     L DN R    L+        G +  Q+ +I ++ I E   + +   KT
Sbjct: 119 TALLRVA-----LSDNHRIVQHLAELGRKLAAGEVL-QLSNISNQDISEDVYYQVIDQKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
             L    C  GAI   AS+   E+   FG N+G+IFQ+ DD+ D     ++ K
Sbjct: 173 AVLFESCCILGAISVGASEEMIEKAAKFGHNVGMIFQIRDDIFDYYDSAEIGK 225


>gi|71062428|gb|AAZ21431.1| geranyltranstransferase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 259

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 80/193 (41%), Positives = 122/193 (63%), Gaps = 3/193 (1%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + Y L  GGKKIRS ++ +  ++F +N+ T + +GAA+ECIH YSLIHDDLP MD+  IR
Sbjct: 1   MEYGLFPGGKKIRSKILIDIGAIFKINYKTLISIGAAVECIHAYSLIHDDLPCMDDDKIR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGK + HI++ E TA++AGN LLT AFEI+ S   ++ + I+  L+  L+   G  G+ G
Sbjct: 61  RGKISTHIKFGESTAVLAGNSLLTMAFEILVSSSLKINEKIKVDLVKKLSETSGHLGIAG 120

Query: 162 GQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           GQ LD+  E   + ++++  ++  KTG L  F C    I+   S  + +     G N+G+
Sbjct: 121 GQYLDLSFEKKKVSKSKIIDMEIKKTGKLFSFCCAVPVIIKRKSNTQIKFFENIGSNIGL 180

Query: 220 IFQLADDLLDCEE 232
           +FQ+ADDL+D + 
Sbjct: 181 LFQIADDLIDFKG 193


>gi|327405188|ref|YP_004346026.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
 gi|327320696|gb|AEA45188.1| Geranyltranstransferase [Fluviicola taffensis DSM 16823]
          Length = 329

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 14/221 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           ++    +         L  +  + + L GK++R  +V   A  F V    A+    AIE 
Sbjct: 19  IIQFLETEALEGFPSNLADSTYHIMTLEGKRLRPIMVLMAAQGFGVTTEAAMSAAIAIEV 78

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
            H ++L+HDD+  MD   +RRG  TVH +Y    AI+ G+ +L ++  ++    T+ K  
Sbjct: 79  FHNFTLVHDDI--MDKALVRRGTITVHEKYGVDKAIVTGDAMLPHSMGLLIK-GTEEKSA 135

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198
           +  +  L +   +       GQ  D++ E    +   +   + ++KT  L   ACE GAI
Sbjct: 136 VLMKSFLKMAQEVM-----EGQQYDMEFETQEIVTVEEYMNMIRLKTSVLFGCACEIGAI 190

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPKK 237
           + +AS  ++++L  FG   G+ FQ+ DD LD   D    K+
Sbjct: 191 LGNASIEDQKKLYDFGLYTGLAFQIMDDYLDTFGDDTFGKR 231


>gi|229029293|ref|ZP_04185383.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1271]
 gi|228732041|gb|EEL82933.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH1271]
          Length = 320

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|229078796|ref|ZP_04211349.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock4-2]
 gi|228704478|gb|EEL56911.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock4-2]
          Length = 305

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 11/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  A
Sbjct: 1   MIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVA 57

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +   
Sbjct: 58  LELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPE 115

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                S  +L +            Q+ D  +   +        K KT  L+  +C+ GAI
Sbjct: 116 AHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAI 169

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 170 AAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 207


>gi|33861175|ref|NP_892736.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|33639907|emb|CAE19077.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
          Length = 323

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++  LDDL+ +  + +   H     +A      GGK++R  +V   +   + +
Sbjct: 4   VTELLQPVENDLDDLINELKNLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISKAISQD 63

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L  
Sbjct: 64  FTLTTKHKRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNTRVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L            Q L+  D     ++       KT
Sbjct: 122 QASWHLANLDNVKVVKLLSRVIMDLAEGEI------KQNLNRFDSAQTFSKYINKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  + ++  ++ +   ++   L  FG+N+G+ FQ+ DD+LD   
Sbjct: 176 ASLIANSTKAAGVLCNLEDDKLNHLYEFGKNIGLAFQVVDDILDFTG 222


>gi|307264970|ref|ZP_07546531.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919955|gb|EFN50168.1| Trans-hexaprenyltranstransferase [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 322

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 14/230 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECASL 64
           K   N+  I   LD+++      ++  +    + LL  IR +   GK +R   V      
Sbjct: 3   KFWNNNLEIKNELDEVIKIMEKRVKNSNRSIRNILLDMIRNS---GKMLRPAFVILSGKF 59

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +    L + AA+E +H  +L+HDD+  +DN  IRR KPT+  +Y +  A+  G+ L 
Sbjct: 60  GEYDRRRILPLAAAVEMLHMATLVHDDI--IDNALIRRSKPTIQAEYGKNYAVFIGDFLF 117

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           +  F ++S   T       S+++  +           GQ     +  I           K
Sbjct: 118 SECFLLLSDNITIENLKKVSKVVSRICKGEI------GQFESRYNIDITINDYLKRIAAK 171

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           T AL   +   GA  ++  +   + L   G N+G+ FQ+ DD+LD   + 
Sbjct: 172 TAALFALSFYVGAYESNCGEKLAKILGSIGYNIGMAFQIIDDVLDYTGEE 221


>gi|297844640|ref|XP_002890201.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336043|gb|EFH66460.1| hypothetical protein ARALYDRAFT_889097 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 865

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 15/205 (7%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLT--ALRVGAAIECIHCYSL 87
            N  L+SA       GGK++R  LV       A L  +  LT    R+G  IE IH  SL
Sbjct: 568 ENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASL 627

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           IHDD+  +D   +RRGK TVH  +    A++AG+ +   A   +++ +      + SQ++
Sbjct: 628 IHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLQVIKLISQVI 685

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
                          Q   + D  ++     +    KT +L+  + +  AI +       
Sbjct: 686 KDFASGEI------KQASSLFDCDVELDDYLLKSYYKTASLVAASTKGAAIFSKVESEVA 739

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
           E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 740 EQMYQFGKNLGLSFQVVDDILDFTQ 764


>gi|307262498|ref|ZP_07544143.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306867875|gb|EFM99706.1| Octaprenyl-diphosphate synthase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 331

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRIRPLIAVLAANALGYRGNKHVTCAAFIEFVHTATLLHDDV--VDESNMRRGRATAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++       D++    ++S   N   +G +  Q++++ 
Sbjct: 105 ATFGNAASVLVGDFIYTRSFQMMTD-----VDSLEVLKVMSAATNALAEGEV-QQLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQL DD+L
Sbjct: 159 DPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQLIDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DYSA 222


>gi|91975694|ref|YP_568353.1| farnesyltranstransferase [Rhodopseudomonas palustris BisB5]
 gi|91682150|gb|ABE38452.1| Farnesyltranstransferase [Rhodopseudomonas palustris BisB5]
          Length = 336

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPILTLAMANLTGYAGDGHIKLAAAVEFMHTATLLHDDV--VDESEMRRGKKSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAASATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G  +A   + E+   R FG N+GI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPTIADRPKAEQSACRSFGMNIGIAFQLVDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKAAK 234


>gi|228938725|ref|ZP_04101329.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971607|ref|ZP_04132230.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228788130|gb|EEM36086.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228820966|gb|EEM66987.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
          Length = 305

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 11/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  A
Sbjct: 1   MIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVA 57

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +   
Sbjct: 58  LELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPE 115

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                S  +L +            Q+ D  +   +        K KT  L+  +C+ GAI
Sbjct: 116 AHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAI 169

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 170 AAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 207


>gi|30261609|ref|NP_843986.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Ames]
 gi|47526809|ref|YP_018158.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|65318879|ref|ZP_00391838.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
           str. A2012]
 gi|165869531|ref|ZP_02214190.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0488]
 gi|167633294|ref|ZP_02391619.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0442]
 gi|167639098|ref|ZP_02397371.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0193]
 gi|170686048|ref|ZP_02877270.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0465]
 gi|170706518|ref|ZP_02896978.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0389]
 gi|177650331|ref|ZP_02933298.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0174]
 gi|190568668|ref|ZP_03021573.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           Tsiankovskii-I]
 gi|196033307|ref|ZP_03100719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W]
 gi|196038886|ref|ZP_03106193.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           NVH0597-99]
 gi|196046652|ref|ZP_03113876.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           03BB108]
 gi|206975027|ref|ZP_03235942.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           H3081.97]
 gi|218902725|ref|YP_002450559.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH820]
 gi|222095243|ref|YP_002529303.1| heptaprenyl diphosphate synthase component ii [Bacillus cereus Q1]
 gi|225863477|ref|YP_002748855.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           03BB102]
 gi|227815639|ref|YP_002815648.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. CDC 684]
 gi|228932902|ref|ZP_04095767.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229195814|ref|ZP_04322574.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           m1293]
 gi|229602685|ref|YP_002866017.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0248]
 gi|254683101|ref|ZP_05146962.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. CNEVA-9066]
 gi|254723689|ref|ZP_05185475.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A1055]
 gi|254734450|ref|ZP_05192162.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Western North America USA6153]
 gi|254740861|ref|ZP_05198549.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Kruger B]
 gi|254755099|ref|ZP_05207133.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Vollum]
 gi|254759636|ref|ZP_05211660.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Australia 94]
 gi|301053151|ref|YP_003791362.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           CI]
 gi|30255463|gb|AAP25472.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. Ames]
 gi|47501957|gb|AAT30633.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|164714971|gb|EDR20489.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0488]
 gi|167512888|gb|EDR88261.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0193]
 gi|167531332|gb|EDR94010.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0442]
 gi|170128616|gb|EDS97483.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0389]
 gi|170669745|gb|EDT20486.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0465]
 gi|172083475|gb|EDT68535.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0174]
 gi|190560268|gb|EDV14248.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           Tsiankovskii-I]
 gi|195993741|gb|EDX57697.1| heptaprenyl diphosphate synthase component II [Bacillus cereus W]
 gi|196022585|gb|EDX61268.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           03BB108]
 gi|196030031|gb|EDX68631.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           NVH0597-99]
 gi|206747046|gb|EDZ58438.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           H3081.97]
 gi|218538499|gb|ACK90897.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH820]
 gi|221239301|gb|ACM12011.1| heptaprenyl diphosphate synthase component II [Bacillus cereus Q1]
 gi|225790502|gb|ACO30719.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           03BB102]
 gi|227004676|gb|ACP14419.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. CDC 684]
 gi|228587711|gb|EEK45769.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           m1293]
 gi|228826705|gb|EEM72474.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229267093|gb|ACQ48730.1| heptaprenyl diphosphate synthase component II [Bacillus anthracis
           str. A0248]
 gi|300375320|gb|ADK04224.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           biovar anthracis str. CI]
 gi|324325630|gb|ADY20890.1| heptaprenyl diphosphate synthase component II [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 320

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|323136700|ref|ZP_08071781.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
 gi|322398017|gb|EFY00538.1| Polyprenyl synthetase [Methylocystis sp. ATCC 49242]
          Length = 336

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 8/189 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV   A +        L+  A IE +H  +L+HDD+  +D   +RRGK   
Sbjct: 54  AGGKRLRPMLVLATAGMCGYKGDGHLKFAAGIEFMHTATLLHDDV--VDESNMRRGKIAA 111

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            + +   T ++ G+ LL +AF+++  P       + SQ    +     L      Q+   
Sbjct: 112 RMLWGNQTCVLVGDFLLGHAFKMMVEPGMVPPLTVVSQAAAVIAEGEIL------QLNAA 165

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   A E G ++A+  + ++   R +G NLGI FQL DD 
Sbjct: 166 KDTTTTEDAYMAVIRRKTAELFAAAAEVGVMLANKPKADEAAARSYGMNLGIAFQLIDDA 225

Query: 228 LDCEEDLPK 236
           LD      K
Sbjct: 226 LDYGGSSAK 234


>gi|18143445|dbj|BAB79600.1| crtE [Pantoea agglomerans pv. milletiae]
          Length = 303

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 81/226 (35%), Positives = 118/226 (52%), Gaps = 12/226 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA-- 72
           I+  LD LL   +        D + +A+R  AL  GK+IR  L+   A     N   A  
Sbjct: 24  IEQRLDQLLPVESER------DLVGAAMRDGALAPGKRIRPLLLLLAARDLGCNATPAGL 77

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +  A+E +H  SLI DD+P MD+  +RRG+PT+H QY E  AI+A   LL+ AF +++
Sbjct: 78  LDLACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVA 137

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMC 190
           + +  L    R+  +  L+H +G+QG++ GQ  D    D+      + M    KT  L C
Sbjct: 138 AAE-GLTATARADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILMTNHYKTSTLFC 196

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + +  +I+A AS   +E+L  F  NLG  FQL DDL D   D  K
Sbjct: 197 ASMQMASIVAEASGEAREQLHRFSLNLGQAFQLLDDLTDGMADTGK 242


>gi|254785128|ref|YP_003072556.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901]
 gi|237684423|gb|ACR11687.1| octaprenyl-diphosphate synthase [Teredinibacter turnerae T7901]
          Length = 320

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 15/233 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYAL-LGGKKIRSFLVTECASLFN 66
           +Q   K ++   D +     + + +  +  L+  I +Y +  GGK++R  LV   A    
Sbjct: 1   MQSFHKVVEADFDAVNRLIVAKLHSDVD--LVENIGQYIVDAGGKRLRPLLVLLAAKALG 58

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + + A IE IH  +L+HDD+  +D   +RRG+P+ + Q+    +++ G+ L + 
Sbjct: 59  YQGQQHIELAAIIEFIHTATLLHDDV--VDVSALRRGRPSANAQWGNAPSVLVGDFLYSR 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++         NI    ++S T N+  +G +  Q+++ +D  + E     +   KT 
Sbjct: 117 AFQMMVGVG-----NIDVMAIMSDTTNVISEGEV-QQLVNAKDPDVTEQNYMAVIHKKTA 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           AL   ACE+GA++A  S  ++  ++  G +LG+ FQL DD LD     E L K
Sbjct: 171 ALFEAACETGAVIAGVSSEQRASIKQIGYHLGVAFQLVDDALDYHGNTESLGK 223


>gi|325694101|gb|EGD36019.1| geranyltranstransferase [Streptococcus sanguinis SK150]
          Length = 291

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 122/233 (52%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+      F +  
Sbjct: 5   EKLEKIGLTIEDF------YKSQQVSPDLTEVILYSVKAGGKRIRPLLLLGLIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  TEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQVIRLEDLKTIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++A   Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIAEVEQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|330686015|gb|EGG97638.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus epidermidis VCU121]
          Length = 319

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 25/237 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTEC 61
            + +++++  KR++  +                D++L    + LL  GGK++R   V   
Sbjct: 5   NMNNEIKKVEKRLEQAI-------------HSQDKVLEEAAFHLLSSGGKRVRPAFVILS 51

Query: 62  ASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           +             +V  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAII 
Sbjct: 52  SQFGKEEGVSEDTYKVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAIIT 109

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           GN LL    + +S  K +    I S+ ++ +            Q  D  +     T    
Sbjct: 110 GNFLLALGLQHLSEIKDKRVHEILSESIVDVCRGE------LFQFQDQFNSQQTMTNYLR 163

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               KT  L+  A E GAI A +      +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 164 RINRKTALLIQLATEVGAITAGSDIKTVRKLKMIGHYIGMSFQIVDDILDFTSTEKK 220


>gi|299768956|ref|YP_003730982.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1]
 gi|298699044|gb|ADI89609.1| solanesyl diphosphate synthase [Acinetobacter sp. DR1]
          Length = 325

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A    +++   A R+ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAARACGLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              + L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLIARAFDLLVDLNN---------MTLLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A   +  +E LR F  + G  FQ+
Sbjct: 154 LQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQI 212

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 213 IDDILDYTSDAE 224


>gi|182677848|ref|YP_001831994.1| polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633731|gb|ACB94505.1| Polyprenyl synthetase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 336

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 19/231 (8%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-----------GGKKIRSFLVTECASLF 65
           ++ ++ LL      M+  +   L  A     +           GGK++R  L    A L 
Sbjct: 12  ESGIERLLALVTPDMERVNQTILSRAASDVTMIPEVANHLISSGGKRLRPMLTLAAAGLC 71

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  +++ A++E +H  +L+HDD+  +D   +RRGK    + +    +++ G+ LL 
Sbjct: 72  GYGGNGHIKLAASVEFMHTATLLHDDV--VDESDMRRGKLAARMLWGNEASVLVGDFLLG 129

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AF+++    +     +    +LS    +  +G +  Q+   +D    E     + + KT
Sbjct: 130 QAFKMMVEVGS-----LACLEVLSTAAAVIAEGEVM-QLAAAKDTETGEDDYLAVIRAKT 183

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            AL   A E GA++A   + E    R +G NLGI FQL DD LD      K
Sbjct: 184 AALFGAAAEVGALLAERPKAEIAACRSYGLNLGIAFQLIDDALDYGGTSAK 234


>gi|262341076|ref|YP_003283931.1| polyprenyl synthetase family protein [Blattabacterium sp.
           (Blattella germanica) str. Bge]
 gi|262272413|gb|ACY40321.1| polyprenyl synthetase family protein [Blattabacterium sp.
           (Blattella germanica) str. Bge]
          Length = 325

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 12/226 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFN 66
           L +    I   +++   Q  +   T+ N  L+  I + +    GK IR   V   A +  
Sbjct: 5   LDKIKNPIKKEINEFEKQFTNI--TKSNVSLIDQITHYIIHRKGKLIRPIFVFLIAKMLG 62

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                       IE IH  +L+HDD+  +DN  +RRG  +++  +    A++ G+ LL+ 
Sbjct: 63  NIQKKTYHTACLIELIHTATLVHDDV--IDNSSLRRGSFSINAIWKNKIAVLIGDYLLSK 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +  + ++        I  Q +  ++    L      QM +     I E     I   KT 
Sbjct: 121 SLLLATNNNYYDLLKIICQTIKDMSEGELL------QMEESDKLNITEKTYNQIIYHKTA 174

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  +CE GA   +  +    ++R FG  +GI FQ+ DDL D EE
Sbjct: 175 SLIAASCECGARSVNVDEKTALKMRKFGLFVGIAFQIKDDLFDYEE 220


>gi|332074819|gb|EGI85291.1| polyprenyl synthetase family protein [Streptococcus pneumoniae
           GA41301]
          Length = 291

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V  A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVATALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  S   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELSPEMQVKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|293610928|ref|ZP_06693227.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826580|gb|EFF84946.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123244|gb|ADY82767.1| octaprenyl-diphosphate synthase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 325

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A    +++   A R+ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAARACGLDNMANAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              + L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLIARAFDLLVDLNN---------MTLLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A   +  +E LR F  + G  FQ+
Sbjct: 154 LQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQI 212

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 213 IDDILDYTSDAE 224


>gi|228920324|ref|ZP_04083671.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|229043359|ref|ZP_04191076.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH676]
 gi|229109069|ref|ZP_04238669.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock1-15]
 gi|229126927|ref|ZP_04255938.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-Cer4]
 gi|229144212|ref|ZP_04272626.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST24]
 gi|229149811|ref|ZP_04278040.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           m1550]
 gi|228633675|gb|EEK90275.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           m1550]
 gi|228639220|gb|EEK95636.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST24]
 gi|228656527|gb|EEL12354.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-Cer4]
 gi|228674347|gb|EEL29591.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock1-15]
 gi|228725940|gb|EEL77180.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           AH676]
 gi|228839347|gb|EEM84641.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 305

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 11/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  A
Sbjct: 1   MIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVA 57

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +   
Sbjct: 58  LELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPE 115

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                S  +L +            Q+ D  +   +        K KT  L+  +C+ GAI
Sbjct: 116 AHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAI 169

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 170 AAGANRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 207


>gi|221135092|ref|ZP_03561395.1| polyprenyl synthetase [Glaciecola sp. HTCC2999]
          Length = 294

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 125/235 (53%), Gaps = 9/235 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
            ++   ++ +    LL Q   H  T   D LL+A+ YALLG GK++R  L++    +  V
Sbjct: 3   FKQYHAQVVSDTQILLSQCIRHYPTLPCD-LLAAMEYALLGQGKRMRPLLISLVGDVLGV 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      +  AIECIH YSL+HDDLP MD+  +RRG PT HIQY   TAI+ G+ L + A
Sbjct: 62  SKEKLAPLMVAIECIHAYSLVHDDLPDMDDDDLRRGMPTCHIQYTPGTAILVGDALQSLA 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185
           FE ++     L  + +  ++  L    G +GM GGQ +D+   ++ ID   +  + ++KT
Sbjct: 122 FEHLAQ-HPVLSASEKVAVIQILAKASGYEGMCGGQAIDLHFTNQDIDLETLTQLHRLKT 180

Query: 186 GALMCFAC-ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           GAL+        A++       +  L  F  +LG+ FQ+ DD+LD   D   L K
Sbjct: 181 GALLGACVDMVIALVPSLDVEHQALLHTFSRSLGLAFQVQDDILDITSDSDTLGK 235


>gi|330841866|ref|XP_003292910.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum]
 gi|325076811|gb|EGC30569.1| hypothetical protein DICPUDRAFT_157686 [Dictyostelium purpureum]
          Length = 465

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 14/208 (6%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCY 85
           A ++  + +  L+S  +Y   L GK+IR  +V   +   + N   T +++   +E IH  
Sbjct: 168 APYLSKKTSPVLVSMSKYYFELKGKRIRPTIVLLLSKALSANVQKTQIKLAEVVEMIHTA 227

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D    RR   +++  Y    AI+ G+ LL  A  I+S+ +          
Sbjct: 228 SLVHDDV--IDEASTRRDVLSINQSYSNKLAILCGDFLLARASLILSTIRNSD------- 278

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             ++   ++ L  ++ G+ +  +   +           +KTG+L+  +C S AI++ A Q
Sbjct: 279 --VTECMSLALAELVEGEFMQAKSSGVSSFDHYLKKTYLKTGSLITNSCRSAAILSGADQ 336

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
           N       FG+NLG+ FQ+ DDLLD   
Sbjct: 337 NIVNISTEFGKNLGLAFQIIDDLLDYTG 364


>gi|310642561|ref|YP_003947319.1| heptaprenyl diphosphate synthase component ii (spore germination
           protein c3) [Paenibacillus polymyxa SC2]
 gi|309247511|gb|ADO57078.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Paenibacillus polymyxa SC2]
          Length = 324

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 10/215 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
            ++   +      + L++     LL  GGK++R   V         +     R+   +E 
Sbjct: 16  FIEEELYRSIDSREPLINDTSLHLLKAGGKRLRPVFVLLGGKFGEYDLDKLKRIAVPLEL 75

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SL+HDD+  +D+  +RRG+PTV  ++D   A+  G+ +   A  I +         
Sbjct: 76  IHSASLVHDDV--IDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARALSIAAGLPNPDIHR 133

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           + S+ ++ ++           Q+ D  +         +  + KT  L+  +C+ GA+ A 
Sbjct: 134 VLSKALVQMSIGE------MEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAAG 187

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A +     L  +G N+G+ FQ+ DDLLD      K
Sbjct: 188 ARERVNSLLYTYGYNVGMAFQIQDDLLDLCGTEKK 222


>gi|114765815|ref|ZP_01444908.1| geranylgeranyl pyrophosphate synthetase [Pelagibaca bermudensis
           HTCC2601]
 gi|114541814|gb|EAU44851.1| geranylgeranyl pyrophosphate synthetase [Roseovarius sp. HTCC2601]
          Length = 289

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 93/235 (39%), Positives = 133/235 (56%), Gaps = 14/235 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L+  ++ +    D +L   A       +  +L A+RYA  GGK +R +LV E A L
Sbjct: 2   FRDSLEAGARAVAAHFDHVLSDAA-------DLPVLHAMRYATTGGKGLRGWLVLEGARL 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +V    AL    AIE IH YSL+HDDLP MD+  +RRG PTVH ++DE TA++AG+ L 
Sbjct: 55  HDVAPERALWPACAIEAIHAYSLVHDDLPCMDDDDLRRGLPTVHRKWDEATAVLAGDALQ 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
              FE+++ P+      +R+ L LSL    G +GM+ GQ LD+  E     +D  Q+  +
Sbjct: 115 ALGFEMVADPRCHPDPLVRADLTLSLARAAGARGMVLGQALDMAAERADAPLDLQQITAL 174

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q  KTGAL+ ++ E+GA +AHA       L  + E LG+ FQ+ADD+LD E D  
Sbjct: 175 QAGKTGALIAWSAEAGARLAHAD---LAPLTAYAERLGLAFQIADDILDVEGDAE 226


>gi|269792514|ref|YP_003317418.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100149|gb|ACZ19136.1| Geranyltranstransferase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 305

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 118/237 (49%), Gaps = 11/237 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
                 L      ++  L+ L     S    +   RL SA+ Y+L  GGK++R  L    
Sbjct: 8   FDFDGYLASRRSWVEEALERL----CSSRPKRVPSRLWSAMVYSLTAGGKRLRPVLCLMA 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A  F +     + +  A E IH  SLIHDDLP MD+  +RRGKPT H+ + E  A++AG+
Sbjct: 64  AEAFGLEGQRVMPLALAFEMIHTASLIHDDLPCMDDDDLRRGKPTNHVVFGEAMALLAGD 123

Query: 122 GLLTYAFE--IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DET 175
            LL  AFE  I           + S  ++SL    G  G+ GGQ +D+  E +     + 
Sbjct: 124 ALLALAFESAIEGLMANHFSGELISLAVMSLAKATGPSGICGGQSMDMGFEDMGQLGPDR 183

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +V  + + KTG L+  + E GAIMA A ++    +R +G  LG  FQ+ADD+LD   
Sbjct: 184 RVMEVARSKTGVLIASSLEGGAIMAGADEDALSNVRGYGMALGKAFQVADDILDVTG 240


>gi|94969054|ref|YP_591102.1| trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551104|gb|ABF41028.1| Trans-hexaprenyltranstransferase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 331

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 13/186 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L+   A L     L A+R+GA +E IH  +L+HDD+  +D+  IRRG+P+ +
Sbjct: 51  GGKRLRPALLLLSAKLMAYRGLGAVRLGAVVEIIHTATLVHDDI--IDDAEIRRGRPSAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+     ++AG+ L   AF++  + +     +   +L          Q M+ G++L I+
Sbjct: 109 TQWGNSKCVLAGDWLYMQAFKVAVAERNFAVLDTLIEL---------TQKMVEGELLQIE 159

Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              + I   + F +   KT  L       G I+  A+  + E+L  +G  +G+ FQ+ DD
Sbjct: 160 KLGKLISLQEHFDLIDRKTACLFSVCMRLGGILGGATAEQIEKLGEYGHCVGMAFQIVDD 219

Query: 227 LLDCEE 232
           +LD   
Sbjct: 220 VLDLTA 225


>gi|325925951|ref|ZP_08187318.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans
           91-118]
 gi|325543616|gb|EGD15032.1| geranylgeranyl pyrophosphate synthase [Xanthomonas perforans
           91-118]
          Length = 332

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 18/224 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +D ++   L      +  Q  D ++SA      GGK++R  LV         +     ++
Sbjct: 27  VDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHHQL 79

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++    
Sbjct: 80  AAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVEL- 136

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
               D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L       
Sbjct: 137 ----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGTRL 191

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GA+ + AS   +++L  +G  LG  FQ+ADD+LD      DL K
Sbjct: 192 GALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGK 235


>gi|218196351|gb|EEC78778.1| hypothetical protein OsI_19015 [Oryza sativa Indica Group]
          Length = 414

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 17/235 (7%)

Query: 7   SKLQENSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT---- 59
           ++    S  ++ + DDLL        +    N  L+SA       GGK++R  LV     
Sbjct: 87  AERTSVSSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSR 146

Query: 60  ECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
             A L  +  LT    R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A+
Sbjct: 147 ATAELAGLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAV 204

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           +AG+ +   +   +++ +      + SQ++               Q   + D  I     
Sbjct: 205 LAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEI------KQASTLFDCDITLDDY 258

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +    KT +L+  +  S AI +  S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 259 LLKSYYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQ 313


>gi|21232167|ref|NP_638084.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767704|ref|YP_242466.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188990821|ref|YP_001902831.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris
           pv. campestris str. B100]
 gi|21113920|gb|AAM42008.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573036|gb|AAY48446.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732581|emb|CAP50775.1| Octaprenyl-diphosphate synthase, probable [Xanthomonas campestris
           pv. campestris]
          Length = 332

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 15/220 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 25  AAVDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHH 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 78  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 136 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             GA+ + A    ++ L  +G  LG  FQ+ADD+LD   D
Sbjct: 190 RLGALASGADAQVQQCLYDYGMQLGFAFQIADDVLDYAAD 229


>gi|169632597|ref|YP_001706333.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter baumannii
           SDF]
 gi|169794921|ref|YP_001712714.1| octaprenyl-diphosphate synthase (octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter baumannii
           AYE]
 gi|184159304|ref|YP_001847643.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           ACICU]
 gi|213157674|ref|YP_002320472.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057]
 gi|215482467|ref|YP_002324653.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294]
 gi|239502311|ref|ZP_04661621.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB900]
 gi|260557286|ref|ZP_05829502.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606]
 gi|301344906|ref|ZP_07225647.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB056]
 gi|301511077|ref|ZP_07236314.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB058]
 gi|301595152|ref|ZP_07240160.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB059]
 gi|332854208|ref|ZP_08435228.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6013150]
 gi|332866350|ref|ZP_08436955.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6013113]
 gi|332872565|ref|ZP_08440534.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6014059]
 gi|169147848|emb|CAM85711.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter baumannii
           AYE]
 gi|169151389|emb|CAP00114.1| octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Acinetobacter baumannii]
 gi|183210898|gb|ACC58296.1| Geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           ACICU]
 gi|213056834|gb|ACJ41736.1| trans-hexaprenyltranstransferase [Acinetobacter baumannii AB0057]
 gi|213986828|gb|ACJ57127.1| solanesyl diphosphate synthase [Acinetobacter baumannii AB307-0294]
 gi|260409392|gb|EEX02694.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 19606]
 gi|322509215|gb|ADX04669.1| ispB [Acinetobacter baumannii 1656-2]
 gi|323519244|gb|ADX93625.1| geranylgeranyl pyrophosphate synthase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332728133|gb|EGJ59521.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6013150]
 gi|332734698|gb|EGJ65802.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6013113]
 gi|332739251|gb|EGJ70109.1| octaprenyl pyrophosphate synthetase [Acinetobacter baumannii
           6014059]
          Length = 325

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A    +++   A R+ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAARACGLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              + L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLIARAFDLLVDLNN---------MTLLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A   +  +E LR F  + G  FQ+
Sbjct: 154 LQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQI 212

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 213 IDDILDYTSDAE 224


>gi|148260434|ref|YP_001234561.1| polyprenyl synthetase [Acidiphilium cryptum JF-5]
 gi|146402115|gb|ABQ30642.1| Polyprenyl synthetase [Acidiphilium cryptum JF-5]
          Length = 344

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 12/228 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHM--QTQHNDRLLS--AIRYALLGGKKIRSFLVTECASLF 65
           ++   R+  +L D L +T   +  +   +  L+   A      GGK++R  L    A L 
Sbjct: 20  EDALHRLAVVLQDDLTETNRTILARMASDVELIPQLAAHLIAAGGKRLRPLLTLAAARLC 79

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  + + A +E IH  +L+HDD+  +D   +RRG  + +  +    +++ G+ L  
Sbjct: 80  GYRGERHIHLAACVEFIHTATLLHDDV--VDESGLRRGLASANAVFGNKASVLVGDFLFA 137

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AFE++    +     +    +L        +G +  Q+    D   D  + F + + KT
Sbjct: 138 RAFELMVEDGS-----LDVLRILCNASATIAEGEVL-QLTTQNDLSTDIPRYFKVIEGKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            AL   ACE G ++A         L C+G  LG+ FQL DD LD   D
Sbjct: 192 AALFAAACEVGGVVADRDSAVCGALACYGAALGMAFQLVDDALDYAAD 239


>gi|229918708|ref|YP_002887354.1| trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b]
 gi|229470137|gb|ACQ71909.1| Trans-hexaprenyltranstransferase [Exiguobacterium sp. AT1b]
          Length = 320

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 10/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L+   + ++  +D +    ++ ++T H   + SA R  L  GGK+IR   V   A     
Sbjct: 3   LKRLYRHMNREIDQIDQFLSTRVRTDHPV-IESASRQLLDAGGKRIRPAFVLLSAGFGET 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             +   +V +++E IH  SL+HDD+  +D+  +RRGKPTV  +YDE  A+  GN L   A
Sbjct: 62  KDIRLTKVASSLELIHMASLVHDDV--IDDAMLRRGKPTVMERYDETVAMYTGNTLFGEA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             ++S       D+     +++ T      G +  Q+ D  +      +       KT  
Sbjct: 120 IRLVSEI-----DSPEVMRIMADTMERICVGEIN-QIQDQYEWGQSPKRYLDRIARKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C +GA+++ AS    ++L  FG ++G+ FQ+ DDLLD   
Sbjct: 174 LIETSCAAGAVISGASPQTVKQLSLFGYDIGMAFQMTDDLLDFTA 218


>gi|326385511|ref|ZP_08207150.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326210050|gb|EGD60828.1| farnesyltranstransferase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 337

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 8/225 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           LQ     +   ++ +       MQ++       A      GGK++R  L    A L    
Sbjct: 16  LQPLLALVADGMNSVNAVILDRMQSRIPLIPALAGHLIAGGGKRMRPMLTLAGAELVGYG 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                ++ AA+E IH  +L+HDD+  +D   +RRGK   +I Y     ++ G+ L + +F
Sbjct: 76  GSRHYKLAAAVEFIHTATLLHDDV--VDGSDMRRGKKAANIIYGNPATVLVGDFLFSRSF 133

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++    +     I+   +LS    I  +G +  Q++  ++    E +   I   KT AL
Sbjct: 134 ELMVEDGS-----IKVLRILSNASAIITEGEV-DQLIAQREIETSEERYLAIINGKTAAL 187

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              AC   A++A   ++E+  L  +G +LG  FQLADD +D + D
Sbjct: 188 FAAACRIAAVVAERPEDEELALDAYGRHLGTAFQLADDAIDYDSD 232


>gi|162147610|ref|YP_001602071.1| octaprenyl-diphosphate synthase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542242|ref|YP_002274471.1| polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786187|emb|CAP55769.1| putative octaprenyl-diphosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529919|gb|ACI49856.1| Polyprenyl synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 358

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 12/196 (6%)

Query: 42  AIRYALLGGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           A      GGK++R  L    A L        H   + + A +E IH  +L+HDD+  +D 
Sbjct: 66  AAHLVAAGGKRLRPLLTLAAARLCDYPAGPEHQRHVSLAACVEFIHTATLLHDDV--VDE 123

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  + +  +    +++ G+ L   +F++++   +     ++   +LS       +
Sbjct: 124 SLLRRGLASANAVFGNKASVLVGDFLFARSFQLMTDDGS-----LKVMAILSSASATIAE 178

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           G +  QM    D      Q   +   KT AL   AC  GA++A   + E+  L  FG NL
Sbjct: 179 GEVL-QMSTQNDLSTSVEQYLEVIHGKTAALFAAACRVGAVVAERPEAEELALESFGTNL 237

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQL DD LD   D
Sbjct: 238 GMAFQLVDDALDYAAD 253


>gi|160871595|ref|ZP_02061727.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella
           grylli]
 gi|159120394|gb|EDP45732.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Rickettsiella
           grylli]
          Length = 322

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 19/240 (7%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   + + ++++   +D +++  L      +  Q    L+++      GGK++R  +  
Sbjct: 1   MNLAPIVALVKKDLDEVDALINRCLY-ADIPLIPQLAKHLINS------GGKRLRPLIAL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A  F        R+ A++E IH  +L+HDD+  +D   +RRGK T +  +    +++ 
Sbjct: 54  LSAKAFGYQGKEHRRLAASLELIHGATLLHDDV--IDGSVLRRGKKTANSLWGNSASVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L + AF++IS       +N R    L+   N   Q  +  Q+++  +  +DE     
Sbjct: 112 GDFLYSRAFQLISQI-----NNSRVLTSLADATNTLAQSEVL-QLINCYNVDVDEAYCLK 165

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           + + KTG L   A E  A++    + E   +  +G +LGI FQL DD LD   D   L K
Sbjct: 166 VIQGKTGVLFSIAAEQPAMLTERPEAEISAMAHYGMHLGIAFQLIDDSLDYSGDPQQLGK 225


>gi|251772722|gb|EES53284.1| trans-hexaprenyltranstransferase [Leptospirillum ferrodiazotrophum]
          Length = 332

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 9/197 (4%)

Query: 41  SAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
               Y + GG K++R  L+   + L        + + A +E IH  +L+HDD+  +DN  
Sbjct: 42  EMTSYVVSGGGKRLRPLLMVISSRLSGAEGPEPILLAAVVEMIHTATLLHDDV--VDNAD 99

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGK   H ++    AI+ G+ L   +  +     +   ++  +     ++    L+  
Sbjct: 100 VRRGKKAAHQRWGNQPAILVGDFLYANSLWLAMGLHSHEVNDSLTLACKKMSEGEILELF 159

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           L G      +    E Q + +   KT  L    C  G I+   S  EKE L  FG  +G+
Sbjct: 160 LDG------NLEATEDQYYNVAACKTATLTASTCRLGGILGGLSDEEKEALDRFGYYVGM 213

Query: 220 IFQLADDLLDCEEDLPK 236
            FQ+ADD LD      K
Sbjct: 214 AFQVADDALDYMASEEK 230


>gi|32491227|ref|NP_871481.1| hypothetical protein WGLp478 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166434|dbj|BAC24624.1| ispB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 323

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 8/187 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR   +   A     N    + + + IE IH  +L+HDD+  +D+   RRG  +V++
Sbjct: 44  GKFIRPIAIILAAKSLFYNKKKHIILASLIELIHMSTLLHDDI--IDDAKKRRGNASVNV 101

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +  +  I+ G+ + T AF++IS  ++      +   ++S   N+ ++G +  Q+     
Sbjct: 102 VFGNIPTILIGDFIYTRAFQMISKLRS-----FKIFKIISNAVNMIVEGEIL-QLTYCNS 155

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I       I   KT  L   + +S AI++ +S  E++  + +G  LGI FQ+ DD LD
Sbjct: 156 VDITIKNYMQIIYKKTAKLFEVSLQSAAILSKSSYKEEQAFKNYGRYLGISFQIIDDFLD 215

Query: 230 CEEDLPK 236
            + D  K
Sbjct: 216 YKSDFKK 222


>gi|229084617|ref|ZP_04216886.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-44]
 gi|228698693|gb|EEL51409.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-44]
          Length = 320

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 15/230 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S L+ +   I+  L  ++      ++     +L+ A      GGK+IR   V       +
Sbjct: 8   SFLRSDINVIEKELKKVVASEQQLIEDA-ALQLIEA------GGKRIRPVFVLLAGKFGD 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
               T   V  A+E IH  SL+HDD+  +D   +RR   TV+ ++ +  A+  G+ L   
Sbjct: 61  YKLETIKHVAVALELIHMASLVHDDV--IDAALLRRNSATVNAKWGDRIAMYTGDYLFAK 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           + E I++ +        S  +L +            Q+ D  +   +        K KT 
Sbjct: 119 SLECITNLEVPEAHQALSYTILEVCKGEI------EQIKDKYNYNQNLRTYLRRIKRKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L+  +C+ GAI + AS++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 173 LLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|229096105|ref|ZP_04227078.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-29]
 gi|229115061|ref|ZP_04244471.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock1-3]
 gi|228668201|gb|EEL23633.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock1-3]
 gi|228687065|gb|EEL40970.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-29]
          Length = 320

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E +++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECVTNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDMVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|312888574|ref|ZP_07748143.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM
           18603]
 gi|311298888|gb|EFQ75988.1| Trans-hexaprenyltranstransferase [Mucilaginibacter paludis DSM
           18603]
          Length = 323

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + E  + I   +D    +  + MQ+     L     Y +   GK+IR   +   ASL   
Sbjct: 4   IDEIKRPIAAEIDVFEEKFKTSMQSSVP-LLDRITHYIVKRKGKQIRPMFLFLSASLCGG 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            + +  R  A +E +H  +L+HDD+  +DN Y RRG  +++  +    A++ G+ LL+  
Sbjct: 63  INESTHRGAALVELLHTATLVHDDV--VDNSYQRRGFFSINALWKNKIAVLVGDFLLSKG 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             +           I S+ +  ++    L      Q+  ++   IDE   + + + KT +
Sbjct: 121 LLLSIENNDFHLLKIVSEAVRQMSEGELL------QIEKVRRMDIDEPVYYDVIRQKTAS 174

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
           L+   C  GA  + A     E++R FGE +GI FQ+ DD+ D   +D+ K
Sbjct: 175 LIASCCACGAASSGADDATVEKMRLFGEKIGIAFQIKDDMFDFGTDDVGK 224


>gi|315646907|ref|ZP_07900022.1| Polyprenyl synthetase [Paenibacillus vortex V453]
 gi|315277837|gb|EFU41161.1| Polyprenyl synthetase [Paenibacillus vortex V453]
          Length = 794

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 6/226 (2%)

Query: 16  IDTILDDLLLQTASHMQTQHND---RLLSAIRYALLG-GKKIRSFLVTECA-SLFNVNHL 70
             T+ D++  Q      +        L+    Y L G GK++R  L      + + +   
Sbjct: 508 FATVRDEINSQLQIKQPSDTPPMQVSLIDTANYTLEGDGKRLRPILTWVMGVNEYGLEPS 567

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             + +  ++E +H  SLI DDLPS DN   RRG+PT+H  ++  TA I G  L+  A E 
Sbjct: 568 AIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHNSATAEITGLYLIQKAIEE 627

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
            SS       ++ S  +   +   G   M     LD + + +   Q+ MI   KTG    
Sbjct: 628 QSSLVGFDASSVVSL-IQYSSKRAGEMCMGQAMDLDSKGKKLTLEQLNMICFYKTGIAFE 686

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +    AI+A  ++ E   L+ F  + GI FQ+ DDLLD + DL +
Sbjct: 687 ASLVMPAILAQVNEAEIALLKKFAYHAGIAFQIKDDLLDVQGDLER 732


>gi|323143046|ref|ZP_08077750.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei
           YIT 12066]
 gi|322417147|gb|EFY07777.1| putative octaprenyl pyrophosphate synthetase [Succinatimonas hippei
           YIT 12066]
          Length = 323

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL------LGGKKIRSFLVTECASLF---- 65
            + ++   + +  + +    +D  L A   +L       GGK++R  LV   + L     
Sbjct: 4   FEALIGSEMKKVEATLVEGFSDSALEAHVNSLCLSIINAGGKRMRPALVLLASHLLPSYT 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +       ++ A +E +H  +LIHDD+  +DN  +RRG+PT++       A++AG+ + T
Sbjct: 64  DEEETAVCKLAAGVELLHTATLIHDDV--IDNSLMRRGRPTLNSTSGNHVAVLAGDYMFT 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F  I   K           ++S T    + G L  Q+ +  D  I     +     KT
Sbjct: 122 RCFATIKDLK-----KADVLSIISDTLATLVTGEL-DQLKNEGDVNISVEDYYTTIYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL   +  + A+     +     L+ +G  LG  FQ+ DD LD   D  
Sbjct: 176 GALFELSASAPAVYLGEEEKYITALKNYGRYLGNAFQIIDDCLDYSSDSK 225


>gi|224061363|ref|XP_002300442.1| predicted protein [Populus trichocarpa]
 gi|222847700|gb|EEE85247.1| predicted protein [Populus trichocarpa]
          Length = 420

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L Q    +    N  L+SA       GGK++R  LV       A +  + 
Sbjct: 102 FEVVADDLQTLNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEVVGMK 161

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    A++AG+ +   
Sbjct: 162 ELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 219

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +   +++ +      + SQ++               Q   + D  ++  +  +    KT 
Sbjct: 220 SSWYLANLENIEVIKLISQVIKDFASGEI------KQASSLFDCDVELEEYLIKSYYKTA 273

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +    +   ++  +G+NLG+ FQ+ DD+LD  +
Sbjct: 274 SLIAASTKGAAIFSGVDSSVSMQMYDYGKNLGLSFQVVDDILDFTQ 319


>gi|313200383|ref|YP_004039041.1| polyprenyl synthetase [Methylovorus sp. MP688]
 gi|312439699|gb|ADQ83805.1| Polyprenyl synthetase [Methylovorus sp. MP688]
          Length = 295

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/234 (32%), Positives = 122/234 (52%), Gaps = 9/234 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECA 62
              +   +   R++ +LDD+L             RL  A+RYA+LGG K++R+ L     
Sbjct: 2   DFNAWSLDIQTRMERVLDDILPAANII-----PSRLHGAMRYAVLGGGKRVRALLAHAAG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                      +  AA+E IH YSL+HDD+P MD+  +RRGKP+ H QYD+ TA++ G+ 
Sbjct: 57  EFCQAPISAVEQSAAAVELIHAYSLVHDDMPCMDDDDLRRGKPSCHKQYDDATALLVGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMI 180
           L   AF++++ P        +  ++  L    G +GM GGQ +D+    +D  +T++  +
Sbjct: 117 LQALAFKVLAEPGLLRDAARQMHMVHILAVASGSRGMAGGQAIDLASVGLDLTQTELEQM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTGAL+  A   GA  A     +  + +  + + +G+ FQ+ DD+LD E D
Sbjct: 177 HIHKTGALIRAAALLGAESADTVDADRIKAVDHYAQAIGLAFQVVDDILDSEAD 230


>gi|322376511|ref|ZP_08051004.1| geranyltranstransferase [Streptococcus sp. M334]
 gi|321282318|gb|EFX59325.1| geranyltranstransferase [Streptococcus sp. M334]
          Length = 291

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    + + L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVQSALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   +E+L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEMQEKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|225174192|ref|ZP_03728191.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169977|gb|EEG78772.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 324

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 16/223 (7%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
            K+++  L +L     S      +          + GGK++R  +V  C S +       
Sbjct: 17  LKQVEARLRELSRGEDSWTPLFSDS--------VIRGGKRLRPAMVLLCGSFYASPQTEL 68

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + +  AIE IH  SL+HDD+  +D+   RRG PTV  ++ +  A++ G+ L   AF +++
Sbjct: 69  VDMATAIELIHTASLVHDDV--IDHAASRRGHPTVSAKWGDHQAVLYGDFLFARAFSLLT 126

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                    +     ++   ++  +G +  Q     +  + E         KT   +   
Sbjct: 127 KHG-----QVGVLENMTRAISLMCEGEIE-QAASRFNPNVTEADYISYIHKKTAYFISAC 180

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           C +GA        EK+ L  FG  LG  FQ+ DDLLD   +  
Sbjct: 181 CLAGAEACDMPPAEKKALATFGLQLGYAFQMIDDLLDYTANPG 223


>gi|217959091|ref|YP_002337639.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH187]
 gi|217065071|gb|ACJ79321.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           AH187]
          Length = 320

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSYTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|260773301|ref|ZP_05882217.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           metschnikovii CIP 69.14]
 gi|260612440|gb|EEX37643.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           metschnikovii CIP 69.14]
          Length = 261

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 5/198 (2%)

Query: 43  IRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +RY  LLGGK+ R +LV     +             A+EC+H YSLIHDDLP+MD+  +R
Sbjct: 1   MRYGLLLGGKRARPYLVYITGQMLGCQLTDLDTPACAVECVHAYSLIHDDLPAMDDDDLR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGML 160
           RGKPT HI++DE TAI+ G+ L T AF I++  +        R +++ +L    G QGM 
Sbjct: 61  RGKPTCHIKFDEATAILTGDALQTLAFTILAEGQLSTHGETNRIKMVQALAEASGAQGMC 120

Query: 161 GGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENL 217
            GQ LD   ++  I   ++  I   KTGALM  A   GA+ A         +L  +   +
Sbjct: 121 LGQALDLAAENRRITLDELETIHHNKTGALMRCAIRMGAMAAGQKGLAILPQLDRYAAAV 180

Query: 218 GIIFQLADDLLDCEEDLP 235
           G+ FQ+ DD+LD   D  
Sbjct: 181 GLAFQVQDDILDIISDTE 198


>gi|255262547|ref|ZP_05341889.1| geranyltranstransferase [Thalassiobium sp. R2A62]
 gi|255104882|gb|EET47556.1| geranyltranstransferase [Thalassiobium sp. R2A62]
          Length = 281

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 130/235 (55%), Gaps = 24/235 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
             + + + + RI+  +D +L           +D L+  + +AL GGK  R+FLV E + L
Sbjct: 4   FKTAMADAASRIEARIDQVLTP---------DDPLIEPMGHALRGGKMFRAFLVLEGSRL 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V+   AL    AIECIH YSL+HDDLP MD+  +RRG+PTVH ++DE TA++ G+ L 
Sbjct: 55  HGVDEAVALDAAMAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHKKWDEATAVLVGDNLQ 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           + AF++I+ P        R          +  + M+ GQMLDI  E     +   Q+  +
Sbjct: 115 SLAFQLITGPGLGGAIAQRL--------AVDARTMVKGQMLDIAAETAATPLTLDQIIEL 166

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q+ KTGAL+ +A  +G +MA A       +  + + LG+ FQ+ADDLLD E D+ 
Sbjct: 167 QQHKTGALIKWAAVAGPLMAGAD---IGPMSRYADALGLAFQIADDLLDVEGDVA 218


>gi|22299300|ref|NP_682547.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1]
 gi|22295483|dbj|BAC09309.1| solanesyl diphosphate synthase [Thermosynechococcus elongatus BP-1]
          Length = 323

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 15/221 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH---LTALRVGAA 78
           +L +    +    +  L +A  +     GK+IR  +V   +     +        R+   
Sbjct: 17  VLTENLKALIGAQHAVLSAAAEHLFAASGKRIRPAIVFLVSRATLPDQGITPRHCRLAEI 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL HDD+  +D   +RRG PTV+  +    AI AG+ L   A   ++      
Sbjct: 77  TEMIHTASLFHDDV--VDQAQLRRGVPTVNSVFGNRVAIQAGDFLFAQASWYLADLDNLQ 134

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              + SQ++               Q  +  D  I      +    KT +L+  + ++ A+
Sbjct: 135 VVKLLSQVIKDFAEGEI------RQGFNRFDTSITLDDYLLKTYYKTASLIANSAKAAAV 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           ++ A     E +  +G+NLG+ FQ+ DD+LD      +L K
Sbjct: 189 LSEAPPETIEAMYTYGKNLGLAFQIVDDILDFTRSTAELGK 229


>gi|171778673|ref|ZP_02919769.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282630|gb|EDT48054.1| hypothetical protein STRINF_00621 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 289

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 12/212 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLP 93
           +  L+ +I Y++  GGK+IR  +  E    F ++       V AA+E IH  SLIHDDLP
Sbjct: 22  SPDLIESILYSVDAGGKRIRPLIFLELLEGFGISLTDAHYDVAAALEMIHTGSLIHDDLP 81

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           +MD+   RRG+ T H ++DE TAI+AG+ L    F+++++    L  +I+ +L+  L+H 
Sbjct: 82  AMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFDLLANAA--LTADIKIRLIAELSHA 139

Query: 154 IGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G  GM+GGQMLD++ E   +  +++ +I   KTG L+ F   +  I+A     E   LR
Sbjct: 140 SGTYGMVGGQMLDMKGEERKLSLSELQLIHSNKTGKLLTFPVVAAGIVAGVEDEELANLR 199

Query: 212 CFGENLGIIFQLADDLLDCE------EDLPKK 237
             G  +G+ FQ+ DD+LD           PKK
Sbjct: 200 KTGSLIGLAFQVRDDILDVTASFEEIGKTPKK 231


>gi|270307760|ref|YP_003329818.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
           VS]
 gi|270153652|gb|ACZ61490.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
           VS]
          Length = 324

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 16/237 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             + + + E  K ++   D+   +  S  + Q    +   + Y L+GGK +R  L    A
Sbjct: 5   SSIYAPINEGLKGVE---DEF--KLVSERRKQSFPEMAEMLDYILVGGKVLRPALSMLSA 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       L +  + E +H  +L+HDD  ++D    RRG+ TV+  +    AI+ G+ 
Sbjct: 60  MCFGAGIKKVLSLATSSEMLHIATLVHDD--AIDKADTRRGRRTVNSVWGLEKAILLGDF 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L  +A E  +        N+R   + + T  I   G L  Q     +             
Sbjct: 118 LFAHAAETAADTG-----NMRIVTLFAQTLQIIASGELK-QAYASFNPDQSYENYLERIS 171

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            KT AL   A + GAI+A AS  ++E +R +G NLG+ FQ+ DD+LD      D+ K
Sbjct: 172 GKTAALFVMATKGGAILADASPADEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGK 228


>gi|218438214|ref|YP_002376543.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424]
 gi|218170942|gb|ACK69675.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7424]
          Length = 323

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++T L  LL +    +    +  L +A  +    GGK+IR  +V   +    ++      
Sbjct: 11  VETDL-RLLSENLKKLVGARHPILAAAAEHLFDAGGKRIRPAIVLLVSKATMLDQEITSR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S+++               Q ++  D  I           KT +LM  
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEI------QQGINQFDTGITLDAYLEKSYYKTASLMAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++ ++++   ++  E L  +G  LG+ FQ+ DD+LD   
Sbjct: 182 SAKAASVLSDVGRDITEHLYNYGRYLGLAFQIVDDILDFTS 222


>gi|188585880|ref|YP_001917425.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350567|gb|ACB84837.1| Polyprenyl synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 337

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 12/213 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           +L      +    +  + S I + L   GK  R  LV   A++  V+    L+   A E 
Sbjct: 18  ILQNLQETLLNDGDTEVQSIINHLLSRQGKLFRPVLVYLSANIHQVDKDRVLKTAMASEL 77

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SL+HDD+  +DN   RRGK TV+  +   +A++ G+ L + AF I++     + D+
Sbjct: 78  IHLASLVHDDI--IDNSDYRRGKQTVNYYWGNKSAVLVGDYLFSKAFSILA-----MIDS 130

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA- 200
            +   + +   +   QG L  Q+ +     I     F + + KT AL+   CESGAI++ 
Sbjct: 131 PKIMALFTDAISKMCQGELI-QLNNAFKSGISREIYFKVIEYKTAALLAACCESGAILSS 189

Query: 201 --HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
               S      L+ +G +LG  +Q+ DD++D  
Sbjct: 190 GNGKSCKSAAALKNYGLHLGRAYQIIDDVMDYT 222


>gi|114776787|ref|ZP_01451830.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1]
 gi|114552873|gb|EAU55304.1| geranyltranstransferase [Mariprofundus ferrooxydans PV-1]
          Length = 295

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 97/232 (41%), Positives = 141/232 (60%), Gaps = 11/232 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
           P+ L  ++  ++  L  +L   AS       +RLLSA+RY+L+ GGK++R  L+ E    
Sbjct: 4   PAFLATHATTVEQALCAMLDARAS----VVPERLLSAMRYSLMAGGKRVRPALLLESYLA 59

Query: 65  FNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +H  A+    AIECIH YSLIHDDLP MD+  +RRGKPT H ++DE TA++A + L
Sbjct: 60  CGGKDHAAAMPAMLAIECIHTYSLIHDDLPCMDDDDLRRGKPTCHRRFDEATAVLAADAL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
              AFE+++    +L   +R +L+  L    G QGM+GGQM+D+Q E    ID   V  I
Sbjct: 120 QALAFELLAEA--ELDPELRLELIRKLALAAGCQGMVGGQMMDMQAEHDSDIDMLMVERI 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KTGAL+C+ CE+GA++A A   E E    +G+ +G++FQ+ADD+LD   
Sbjct: 178 HLHKTGALLCWCCEAGAMLAGAGTAELEASSRYGKAVGLLFQVADDILDATA 229


>gi|226497916|ref|NP_001149100.1| prenyl transferase [Zea mays]
 gi|195624736|gb|ACG34198.1| prenyl transferase [Zea mays]
          Length = 407

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 15/211 (7%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLT--ALRVGAAIEC 81
             +    N  L+SA       GGK++R  LV       A L  +  LT    R+   IE 
Sbjct: 103 KSLVGAENPVLVSAAEQIFSAGGKRLRPALVFLVSRATAELAALPELTTEHRRLAEIIEM 162

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +   +   +++ +      
Sbjct: 163 IHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIK 220

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           + SQ++               Q   + D  +      +    KT +L+  +  S AI + 
Sbjct: 221 LISQVIKDFASGEI------KQASTLFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSG 274

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 275 VGSGVCEQMYEYGRNLGLAFQVVDDILDLTQ 305


>gi|325918710|ref|ZP_08180807.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325918918|ref|ZP_08180989.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325534852|gb|EGD06777.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325535077|gb|EGD06976.1| geranylgeranyl pyrophosphate synthase [Xanthomonas vesicatoria ATCC
           35937]
          Length = 332

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 25  AAVDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHH 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 78  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 136 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             GA+ + A  + ++RL  +G  LG  FQ+ADD+LD     EDL K
Sbjct: 190 RLGALASGADADVQQRLYDYGMQLGFAFQIADDVLDYAAEAEDLGK 235


>gi|329889422|ref|ZP_08267765.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328844723|gb|EGF94287.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 367

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 13/213 (6%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYS 86
           + MQ+      L A      GGK++R  L    A             ++ A++E IH  +
Sbjct: 64  ARMQSDVPVIPLLAEHLVSAGGKRLRPLLTVAAARAIGQTGAIDGPKKLAASVEFIHTAT 123

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+  +D   +RRGK   H+ +   ++++ G+ L   AFE++        D++R+  
Sbjct: 124 LLHDDI--VDGSEMRRGKVAAHLIWGSASSVLVGDFLFARAFELMVET-----DSLRALG 176

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L+    +  +G +  Q+    D  +D      I + KT  L   A ESGA+ A A+  +
Sbjct: 177 ILARASAVIAEGEVL-QLTRAHDLNLDLDTYLQIIRAKTAELFAAAAESGAVGAGATDEQ 235

Query: 207 KERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              LR +G  LGI FQLADD LD     E L K
Sbjct: 236 VAALRDYGMALGIAFQLADDALDYGGATETLGK 268


>gi|325919582|ref|ZP_08181594.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC
           19865]
 gi|325549918|gb|EGD20760.1| geranylgeranyl pyrophosphate synthase [Xanthomonas gardneri ATCC
           19865]
          Length = 358

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 15/220 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 51  AAVDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHH 103

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 104 QLAAIVEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 161

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 162 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 215

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             GA+ + A  + ++RL  +G  LG  FQ+ADD+LD   D
Sbjct: 216 RLGALASGADAHVQQRLYDYGMQLGFAFQIADDVLDYAAD 255


>gi|288928710|ref|ZP_06422556.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288329694|gb|EFC68279.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 325

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            L      I T L D +      + T  +  L  A+ +    GGK++R  L+      F 
Sbjct: 3   YLSTIRTPIHTELKDFIALFDESL-THKDGLLGQALEHVRAKGGKRMRPILILLMTKSFG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A      +E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++ G+ +L+ 
Sbjct: 62  KVTSVAQYAAVGLELLHTASLVHDDV--VDESGERRGQASVNASYNNKVAVLVGDYILST 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   I+           ++L  +L++   L      Q+ +I +    E   F + + KT 
Sbjct: 120 ALLNIARTNDCDIVCDLAELGRTLSNGEIL------QLTNIANTNFSEEVYFEVIRQKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
           AL       GA    A +   E  R FG N+G+IFQ+ DD+ D     DL K
Sbjct: 174 ALFEACAVIGAKAGGADRQAVEAARAFGRNVGVIFQIRDDIFDYYQSADLGK 225


>gi|289664594|ref|ZP_06486175.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667160|ref|ZP_06488235.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 332

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 18/226 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 25  AAVDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHH 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 78  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 136 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             GA+ + A+   +++L  +G  LG  FQ+ADD+LD      DL K
Sbjct: 190 RLGALASGATVEVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGK 235


>gi|115488130|ref|NP_001066552.1| Os12g0271700 [Oryza sativa Japonica Group]
 gi|113649059|dbj|BAF29571.1| Os12g0271700 [Oryza sativa Japonica Group]
          Length = 372

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 17/230 (7%)

Query: 12  NSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASL 64
            S  ++ + DDLL        +    N  L+SA       GGK++R  LV       A L
Sbjct: 50  VSSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 109

Query: 65  FNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             +  LT    R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ 
Sbjct: 110 AGLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDF 167

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           +   +   +++ +      + SQ++               Q   + D  I      +   
Sbjct: 168 MFAQSSWFLANLENIEVIKLISQVIKDFASGEI------KQASTLFDCDITLDDYLLKSY 221

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  +  S AI +  S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 222 YKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQ 271


>gi|126656937|ref|ZP_01728115.1| Polyprenyl synthetase [Cyanothece sp. CCY0110]
 gi|126621775|gb|EAZ92484.1| Polyprenyl synthetase [Cyanothece sp. CCY0110]
          Length = 323

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 12/215 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---TALRVGA 77
            LL      +    +  L +A  +    GGK+IR  +V   +    ++        R+  
Sbjct: 16  RLLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDRELTPRHRRLAE 75

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +++    
Sbjct: 76  ITEMIHTASLVHDDV--VDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNL 133

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               + S+++         QG+      +  D  +           KT +L+  + +S A
Sbjct: 134 EVVKLLSEVIRDFAEGEIFQGI------NRFDTTLTLDAYLDKSYYKTASLIANSAKSAA 187

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I++ +S    + L  +G  LG+ FQ+ DD+LD   
Sbjct: 188 ILSDSSTEVIDSLYAYGRYLGLAFQIVDDILDFTS 222


>gi|72163080|ref|YP_290737.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX]
 gi|71916812|gb|AAZ56714.1| trans-hexaprenyltranstransferase [Thermobifida fusca YX]
          Length = 334

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 27/242 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L  ++Q   ++++ +L D + +         +  L  A  + L  GGK+ R+ LV  
Sbjct: 16  DETLAREIQAELEQVEKVLRDAVAE--------SDPLLREAASHLLEAGGKRFRAILVLL 67

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +  +   +   A +E  H  +L HDD+  MD   +RRG P+ + ++    AI+ G
Sbjct: 68  SARFGDATNPDLVSAAAVVELTHVATLYHDDV--MDEAELRRGSPSANRRWGNTIAILTG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QV 177
           + +   A EI++   T+         +       G   ++ GQ+L+              
Sbjct: 126 DYVFARASEILADLGTEA--------VRLQAQTFG--RLVRGQILETAGPRPGVDPMKHY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
             +   KT +L+  +   GA++ +A     E L   G+ LG+ FQL+DD+LD     E+ 
Sbjct: 176 LDVIADKTASLIASSARFGAMVGNADPEVVETLTRAGDALGMAFQLSDDILDVASETEES 235

Query: 235 PK 236
            K
Sbjct: 236 GK 237


>gi|253576413|ref|ZP_04853743.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844306|gb|EES72324.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 324

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 9/212 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D + +         +D L     + L  GGK++R   V       N +      +   +E
Sbjct: 15  DFIERQLYRSIDGDDDLLSETSLHLLKAGGKRLRPVFVLLGGKFGNYDLQKLQYIAVPLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+   RRGK TV  ++D   A+  G+ +   A   +S        
Sbjct: 75  LIHSASLVHDDV--IDDADTRRGKATVKSKWDNRIAMYTGDYIYAKALMQVSELANPYIH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I ++ M+ ++           Q+ D  +         +  + KT  L+  +C+ GA+ A
Sbjct: 133 RILAKAMVQMSIGE------MEQIRDFFNTEQSVRNYLLRIRRKTALLIAISCQLGAMAA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A       L  +G N+G+ FQ+ DDLLD   
Sbjct: 187 DAPAKVSALLYRYGYNVGMAFQIRDDLLDLFG 218


>gi|240139858|ref|YP_002964335.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1]
 gi|240009832|gb|ACS41058.1| octaprenyl diphosphate synthase [Methylobacterium extorquens AM1]
          Length = 340

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L +  +   A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 58  GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E+   R +G NLGI FQL DD+
Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229

Query: 228 LDCEE 232
           LD   
Sbjct: 230 LDYGG 234


>gi|78048606|ref|YP_364781.1| octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037036|emb|CAJ24768.1| Octaprenyl-diphosphate synthase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 332

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 18/226 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 25  AAVDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHH 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 78  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 136 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             GA+ + AS   +++L  +G  LG  FQ+ADD+LD      DL K
Sbjct: 190 RLGALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGK 235


>gi|282858641|ref|ZP_06267799.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
 gi|282588559|gb|EFB93706.1| polyprenyl synthetase [Prevotella bivia JCVIHMP010]
          Length = 326

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 13/227 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHL 70
            + I++ L D +    S +   H+D LLS + + +   GGK++R  L+   A  F     
Sbjct: 8   KQPIESELSDFIELFNSSLH--HDDGLLSQVLHHIKQRGGKRMRPILILLIAKNFGQISS 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                   +E +H  SLIHDD+  +D    RRG+ +V+  Y+   A++ G+ +L+ A   
Sbjct: 66  VTQHAAVGLELLHTASLIHDDV--VDESSQRRGQASVNASYNNKVAVLVGDYVLSTALLQ 123

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +S     L     ++L  +L+    L      Q+ +IQ E I E     I   KT  L  
Sbjct: 124 VSYTNANLIVRYLAELGQTLSDGEIL------QLSNIQREQITEEAYLQIIARKTAILFE 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
                GA  A AS+++    R FG++LG+IFQ+ DD+ D   D  K+
Sbjct: 178 ICAAIGAESAGASKDDVALARAFGKDLGMIFQIRDDIFDYF-DSEKE 223


>gi|296160521|ref|ZP_06843337.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1]
 gi|295889270|gb|EFG69072.1| Trans-hexaprenyltranstransferase [Burkholderia sp. Ch1-1]
          Length = 330

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+ ++++ ++   L      +  Q ++ ++SA      GGK++R  L+   A
Sbjct: 12  ASLLAPIAEDMQQVNRVIRHRLASDVM-LINQISEYIISA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++          +R   +LS   NI  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A + GA++A +    +     FG  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAAQLGAVLAGSDAKTEAAAAEFGRRIGTAFQIMDDWLDYTG 226


>gi|320160874|ref|YP_004174098.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
 gi|319994727|dbj|BAJ63498.1| polyprenyl synthetase [Anaerolinea thermophila UNI-1]
          Length = 328

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 16/225 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +Q++ + ++T++     +    +Q+   D LLSA      GGK+IR  L      +    
Sbjct: 16  IQDDLRAVETLMRSQADERYPDLQSAL-DLLLSA------GGKRIRPTLTLLAGKMLRAK 68

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L + AAIE +H  +L+HDDL  +D   +RRG PT++ ++     ++ G+ L   A 
Sbjct: 69  GEPLLHLAAAIEMLHTATLVHDDL--IDGSLLRRGMPTLNSRWSPGATVLTGDYLFARAA 126

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            + +       D+I    + S T +I + G L            D T  +     KT +L
Sbjct: 127 NLAAQT-----DSIPVMKLFSETLSIIVGGELTQMFSTRC--KADRTNYYQRIYAKTASL 179

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              + +S A++   S+   E LR +G ++G+ FQ+ DD+LD   +
Sbjct: 180 FETSAKSAALLCLTSELHTEALRAYGYSVGMAFQIIDDILDYTGE 224


>gi|87199374|ref|YP_496631.1| farnesyltranstransferase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135055|gb|ABD25797.1| Farnesyltranstransferase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 337

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L         ++ AA+E IH  +L+HDD+  +D   +RRGK T +
Sbjct: 56  GGKRMRPMLTLASAALLGYGGSRHYKLAAAVEFIHTATLLHDDV--VDGSDMRRGKKTAN 113

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I Y     ++ G+ L + +FE++    +     ++   +LS    +  +G +  Q++  +
Sbjct: 114 IVYGNPATVLVGDFLFSRSFELMVEDGS-----LKVLRILSNASAVISEGEV-DQLVAQR 167

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E     I   KT AL   AC   A++A     ++  L  +G NLGI FQLADD +
Sbjct: 168 QIDTTEEMYLDIIAAKTAALFSAACRIAAVVAERPDADELALDAYGRNLGIAFQLADDAI 227

Query: 229 DCEEDLP 235
           D + D  
Sbjct: 228 DYDSDAA 234


>gi|194336606|ref|YP_002018400.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309083|gb|ACF43783.1| Polyprenyl synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 324

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 9/216 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++  Q    +    N  +    RY L   GK+IR  +V   A L    + ++ R    +E
Sbjct: 15  EIFQQRYKVVLQGQNTLVDKVTRYVLKQQGKQIRPAMVLLAAQLCGGVNESSYRAAIMVE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +LIHDD+  +D   +RRG  +++  +    +++ G+ LL+         K     
Sbjct: 75  LLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLYSLEYKDYGFL 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           ++ S+ +  ++           Q+   +   I E     +   KT +L+  AC  GA+ A
Sbjct: 133 HMVSEAVRRMSEGEIF------QIQKTRSLDISEADYLSVIADKTASLISSACAMGAMSA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +     L+ +GE LG+ FQ+ DDLLD   D  K
Sbjct: 187 TTDEVRIAALKSYGEYLGLAFQIRDDLLDYTGDSKK 222


>gi|329908093|ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546763|gb|EGF31699.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 294

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 117/236 (49%), Gaps = 11/236 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
           G    ++      +  L   L        T    RL +A+RYA+L GGK++R  LV   A
Sbjct: 3   GFDGWMRSTQADAERALVQYLP-----AATALPLRLHAAMRYAVLDGGKRVRPLLVQAAA 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            LF+       R  +A+E IH YSL+HDD+P MD+  +RRGKPTVH+ YDE TA++ G+ 
Sbjct: 58  ELFDAAPANVARAASAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLVGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMI 180
           L   AF +++     ++      ++  L    G  GM GGQ +D+    +D    ++  +
Sbjct: 118 LQAQAFFVLA--GMDIEPARAVAMLRLLADAAGSIGMCGGQAIDLASVGMDLSLAELEQM 175

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            ++KTGAL+  +   GA             L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 HRLKTGALLRASVLLGAWCGTTPDAAATAALEAYAAAIGLAFQVIDDVLDATADSA 231


>gi|226941879|ref|YP_002796953.1| IspB [Laribacter hongkongensis HLHK9]
 gi|226716806|gb|ACO75944.1| IspB [Laribacter hongkongensis HLHK9]
          Length = 322

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 11/218 (5%)

Query: 21  DDLLLQTASHMQTQHNDRLL--SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           DD+L       ++ H+D +L      Y +  GGK++R  L+   A              A
Sbjct: 12  DDMLAVDQVIRRSLHSDVVLIRQVAEYIIGAGGKRLRPALLILAARALGCQGPAVHEQAA 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            IECIH  +L+HDD+  +D    RRG+ T +  +    +++ G+ L T AF+++      
Sbjct: 72  MIECIHTATLLHDDV--VDESDKRRGRDTANAMFGNAASVLVGDFLYTRAFQMMVHT--- 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
              ++R   +++   NI  +G +  Q+L+I +  + ET+   + + KT  L   A   GA
Sbjct: 127 --HSLRVLEIMAEATNIIAEGEVM-QLLNIGNTDLTETEYLQVIQYKTAKLFEAAGRVGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++A A+  ++  L  +G +LG  FQ+ DD+LD   D  
Sbjct: 184 LLAGATPEQEAALAGYGMHLGTAFQIIDDVLDYSGDAA 221


>gi|311772001|pdb|3AQB|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
           Synthase In Complex With Magnesium
 gi|311772003|pdb|3AQB|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
           Synthase In Complex With Magnesium
 gi|311772005|pdb|3AQC|B Chain B, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
           Synthase In Complex With Magnesium And Fpp Analogue
 gi|311772007|pdb|3AQC|D Chain D, M. Luteus B-P 26 Heterodimeric Hexaprenyl Diphosphate
           Synthase In Complex With Magnesium And Fpp Analogue
 gi|2982681|dbj|BAA25268.1| component B of hexaprenyl diphosphate synthase [Micrococcus luteus]
          Length = 325

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 12/222 (5%)

Query: 18  TILDDLLLQTASHM---QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
             L+  +++    +       ++ +  A  + L  GGK++R   V     L +      +
Sbjct: 8   AFLNPYIIEVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLI 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R   ++E +H  SL+HDD   +DN  +RRG  +VHI +D+ TAI  G+ LL  A + I++
Sbjct: 68  RTAVSLELVHMASLVHDD--YIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIAT 125

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   I S+ +L +            QM D  +  +  T        KT  L+  +C
Sbjct: 126 INNSKFHQIFSKTILEVCFGE------FDQMADRFNYPVSFTAYLRRINRKTAILIEASC 179

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA+ +   +     ++ FG  +G+ +Q+ DD+LD   D  
Sbjct: 180 HLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEA 221


>gi|262281247|ref|ZP_06059029.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257478|gb|EEY76214.1| trans-hexaprenyltranstransferase [Acinetobacter calcoaceticus
           RUH2202]
          Length = 325

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A    +++   A R+ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAARACGLDNMANAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              + L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLIARAFDLLVDLNN---------MTLLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A   +  +E LR F  + G  FQ+
Sbjct: 154 LQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQI 212

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 213 IDDILDYTSDAE 224


>gi|299821639|ref|ZP_07053527.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601]
 gi|299817304|gb|EFI84540.1| trans-hexaprenyltranstransferase [Listeria grayi DSM 20601]
          Length = 323

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           ++++   I+  L   ++   +   T     LL A      GGK+IR   V   A L    
Sbjct: 10  IEKDMDMINHELKQAIISAEAETTTASALHLLEA------GGKRIRPLFVCLTARLTEKP 63

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             + ++    A+E IH  S++HDD+  +DN  +RRG+ T+  ++    A+  G+ L   +
Sbjct: 64  DQSKMKYAAVAVELIHMASIVHDDV--VDNASLRRGRETIKSRWGNHIAMYTGDYLFAKS 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            + +++ K      I +  ML+        G +  Q+    D            K KT  
Sbjct: 122 LDYMTNIK-----EIEAHEMLASVTVELATGEIE-QLKSKYDVTQSIRTYLRRIKRKTAL 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +C  GA+++       ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 176 LIAVSCGLGAVISGQDAATTKKLYQFGYYVGMAFQIQDDVLDFVGSQKELGK 227


>gi|284044529|ref|YP_003394869.1| polyprenyl synthetase [Conexibacter woesei DSM 14684]
 gi|283948750|gb|ADB51494.1| Polyprenyl synthetase [Conexibacter woesei DSM 14684]
          Length = 296

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 9/235 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M     +   +  ++++  L  +    A   +T   D L  A+RY+LL GGK+IR  L  
Sbjct: 1   MTAD--AYPDDLRRQVEEYLAAIRFVAA---ETAGADGLEEAMRYSLLAGGKRIRPVLAL 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   AL + AA+E IH YSLIHDDLP+MD+  +RRG+PT H  + E  AI+A
Sbjct: 56  ATARAIERDPAEALPIAAALELIHTYSLIHDDLPAMDDDDLRRGRPTCHKAFGENVAILA 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVF 178
           G+GL   AF  +   +      I +  +  L    G+ GM+GGQ LD+ D    D   + 
Sbjct: 116 GDGLYAEAFRHVLERQAGEPAAILAA-VRELASATGVNGMVGGQYLDVTDSAPRDAAGLR 174

Query: 179 MIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  +KTG L+  +     ++A    +   +  R F   LG++FQ+ DD+LD   
Sbjct: 175 HLHSLKTGRLIGASIMCPLLLAPDQPRATIDSFRSFASELGVLFQIVDDILDVVG 229


>gi|148253842|ref|YP_001238427.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|146406015|gb|ABQ34521.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 336

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAHLTGYAGDGHVKLAAAVEFMHTATLLHDDV--VDESEMRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAAATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G ++A   + E+   R FG NLGI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPVLADRPKAEQTASRSFGMNLGIAFQLVDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKAAK 234


>gi|51245595|ref|YP_065479.1| octaprenyl-diphosphate synthase [Desulfotalea psychrophila LSv54]
 gi|50876632|emb|CAG36472.1| related to octaprenyl-diphosphate synthase [Desulfotalea
           psychrophila LSv54]
          Length = 336

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 15/220 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           ++  + +  + ++      L   + Y LL GGK+IR  LV   A L   N L   R+   
Sbjct: 18  VNRYIAEDIALLRGSMEPLLCDILEYGLLSGGKRIRPLLVLMAARLCGNNGLETYRLATG 77

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E +H  +L HDD+  +D+  +RRG+ ++  ++    AI+AG+ L T A   +       
Sbjct: 78  FEYLHAATLFHDDI--IDHSDLRRGQESIAKKFGMEAAILAGDFLHTRAMIFVGEM---- 131

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACES 195
              + ++ +           M+ G+ L +++     I E   +     KTG L+  ACE 
Sbjct: 132 ---VGAEGLRRFGKATSA--MVDGEFLQLRNAQEYNISELDYYRAVMGKTGVLIAAACEL 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GA+    S+ E   LR +GE LG  FQ+ DDLLD + D  
Sbjct: 187 GALYGGGSEAEIAALRSYGEKLGSAFQIVDDLLDYQGDTA 226


>gi|332992374|gb|AEF02429.1| geranyltranstransferase [Alteromonas sp. SN2]
          Length = 296

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 84/228 (36%), Positives = 128/228 (56%), Gaps = 10/228 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           Q+  ++ DT L+ L+             RL  A+R+ALL GGK++R  LV    +  +V 
Sbjct: 8   QQVKQQTDTSLNTLIDDL-----PHDAPRLKEAMRHALLVGGKRMRPLLVQVIGNTLDVP 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +  AIEC+H YSL+HDDLP+MD+  +RRG+PT HI +DE TAI+AG+ L   AF
Sbjct: 63  KGDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGQPTCHIAFDEATAILAGDALQALAF 122

Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
             ++  P +    N R +L+  L    G +GM GGQ +D+    E I   Q+  +  +KT
Sbjct: 123 STLADAPLSDFATNKRGELLSVLARAAGYRGMCGGQAIDLTSTGEEISLEQLKRLHNLKT 182

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           GAL+    E  +I++     N K  L  + +++G+ FQ+ DD+LD E 
Sbjct: 183 GALLRACVEMVSIVSQDLDSNSKADLLAYADDIGLAFQVQDDILDVEG 230


>gi|254562277|ref|YP_003069372.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4]
 gi|254269555|emb|CAX25521.1| octaprenyl diphosphate synthase [Methylobacterium extorquens DM4]
          Length = 340

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L +  +   A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 58  GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E+   R +G NLGI FQL DD+
Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229

Query: 228 LDCEE 232
           LD   
Sbjct: 230 LDYGG 234


>gi|255575167|ref|XP_002528488.1| solanesyl diphosphate synthase, putative [Ricinus communis]
 gi|223532097|gb|EEF33905.1| solanesyl diphosphate synthase, putative [Ricinus communis]
          Length = 420

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL------FN 66
            + + DDL  L Q    +    N  L+SA       GGK++R  LV   A          
Sbjct: 102 FEVVADDLQTLNQNLRLIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVARATAEVIGLK 161

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
              +   R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    AI+AG+ +   
Sbjct: 162 ELTIKHRRLAEIIEMIHTASLIHDDV--LDESNMRRGKETVHQLYGTRVAILAGDFMFAQ 219

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +   +++ +      + SQ++               Q   + D  ++  +  +    KT 
Sbjct: 220 SSWYLANLENIEVIKLISQVIKDFASGEI------KQASSLFDCDVELEEYLIKSYYKTA 273

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +   ++  E++  +G+NLG+ FQ+ DD+LD  +
Sbjct: 274 SLIAASTKGAAIFSGVDRSVAEQMYEYGKNLGLSFQVVDDILDFTQ 319


>gi|315658247|ref|ZP_07911119.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis
           M23590]
 gi|315496576|gb|EFU84899.1| heptaprenyl diphosphate synthase [Staphylococcus lugdunensis
           M23590]
          Length = 335

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLT 71
           K+++ +L+ ++          ++  L  A  + L  GGK++R   V   +    +     
Sbjct: 28  KKVNNLLEQII--------KSNDTVLEEASLHLLSSGGKRVRPAFVILSSQFGKSKQSED 79

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL    E +
Sbjct: 80  TYKVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLEQL 137

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S       ++ R   ++S +     +G L  Q  D  +     +        KT  L+  
Sbjct: 138 SE-----VNHPRIHTIISTSIVDVCRGELF-QFQDQFNSNQTISNYLRRINRKTALLIQL 191

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A E GA+ ++ASQ    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 192 ATEVGALTSNASQQTVYKLKMIGHYIGMSFQIIDDILDFTSSENK 236


>gi|326318388|ref|YP_004236060.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375224|gb|ADX47493.1| Trans-hexaprenyltranstransferase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 326

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
              + + + E+   +D ++   L  +           +    RY +  GGK++R  L+  
Sbjct: 7   TSAILALIAEDMHEVDKVIGLRLQSSV--------PLIGEIARYIISAGGKRLRPALLLL 58

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +            + A IE IH  +L+HDD+  +D   +RRG+PT +  +    +++ G
Sbjct: 59  MSGALGYQGAQRFNLAAVIEFIHTATLLHDDV--VDESTMRRGRPTANENFGNPASVLVG 116

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L + AF+++        D++R   +LS   NI  +G +  Q+++  D  +DE     +
Sbjct: 117 DFLHSRAFQMMVDA-----DDMRVMQILSEATNIIAEGEV-QQLMNTHDATLDEQGYLEV 170

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + KT  L   +    A++A A    +E    +G+ LG  FQ+ DD+LD + 
Sbjct: 171 IRSKTAKLFEASARLAAVLARAPAPIEEACAEYGKALGTAFQVIDDVLDYDG 222


>gi|306829639|ref|ZP_07462829.1| geranyltranstransferase [Streptococcus mitis ATCC 6249]
 gi|304428725|gb|EFM31815.1| geranyltranstransferase [Streptococcus mitis ATCC 6249]
          Length = 291

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 124/234 (52%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLQVV 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           G L+ +  ++ AI+   +   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIITELAPEIQAKLKTVGELIGLAFQVRDDVLDVSASFEEIGK 229


>gi|293365584|ref|ZP_06612293.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
 gi|291315952|gb|EFE56396.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
          Length = 291

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLKVV 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A      + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|167039330|ref|YP_001662315.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
 gi|256752210|ref|ZP_05493075.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913970|ref|ZP_07131287.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
 gi|307725346|ref|YP_003905097.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
 gi|166853570|gb|ABY91979.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
 gi|256748938|gb|EEU61977.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890655|gb|EFK85800.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
 gi|307582407|gb|ADN55806.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
          Length = 322

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 8/183 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R   V         +    L + AAIE +H  +L+HDD+  +DN  IRR KPT+  
Sbjct: 45  GKMLRPAFVILAGKFGEYDRKKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y +  A+  G+ L + +F ++S           S+++  +           GQ    ++
Sbjct: 103 EYGKDYAVFIGDFLFSESFLLLSDNIAISNLKKVSKVVSKICKGEI------GQFESRRN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I           KT AL   +   GA  +   +N  + L   G N+G+ FQ+ DD+LD
Sbjct: 157 IDITINDYLRRIAAKTAALFALSFYVGAYESKCDENLAKALGSIGYNIGMAFQIIDDILD 216

Query: 230 CEE 232
              
Sbjct: 217 YTG 219


>gi|315646428|ref|ZP_07899546.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453]
 gi|315278071|gb|EFU41391.1| Trans-hexaprenyltranstransferase [Paenibacillus vortex V453]
          Length = 324

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 9/210 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D++ +         +  L     + L  GGK++R   V       + +      V   +E
Sbjct: 15  DVIEKELYLSVEGDSPELTETSLHLLRAGGKRLRPVFVLMGGKFGDYDIDKLKHVAVPLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+   RRGKPTV  ++D   A+  G+ +   A E+ +  K     
Sbjct: 75  LIHSASLVHDDV--IDDADTRRGKPTVKAKWDNRIAMYTGDYIYGKALELTTHLKQPEIH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I ++ M+ ++           Q+ D  +   D  +  +  + KT  L+  +C+ GA+ A
Sbjct: 133 QILAKAMVEMSIGE------MEQIRDFFNTEQDVRRYLLRIRRKTSLLIAVSCQLGALAA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A +     L  FG N+G+ FQ+ DDLLD 
Sbjct: 187 DADRQVANSLYRFGYNVGMAFQIQDDLLDL 216


>gi|163852524|ref|YP_001640567.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
 gi|163664129|gb|ABY31496.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
          Length = 340

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L +  +   A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 58  GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E+   R +G NLGI FQL DD+
Sbjct: 170 KNIETSEDEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229

Query: 228 LDCEE 232
           LD   
Sbjct: 230 LDYGG 234


>gi|81301171|ref|YP_401379.1| trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942]
 gi|81170052|gb|ABB58392.1| Trans-hexaprenyltranstransferase [Synechococcus elongatus PCC 7942]
          Length = 323

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL---FNVNHLT 71
           ++  L  LL  T   +    +  L +A  +    GGK++R  +V   +            
Sbjct: 11  VEADL-QLLTDTLKQLIGARHPILYAAADHLFGAGGKRLRPAVVLLLSRATMPGQEITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  +    A++AG+ L   A   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESSLRRGIPTVHSSFSNRVAVLAGDFLFAQASWHL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +   +     + SQ+++ L     LQG+      +  D  +           KT +L+  
Sbjct: 128 AHLDSLTVVKLLSQVIMDLAEGEILQGL------NRFDSSLSIEVYLDKSYYKTASLLAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +  +++ +S+   + L  +G +LG+ FQ+ DD+LD   
Sbjct: 182 SARAAGVLSGSSETVCDALYDYGRSLGLAFQIVDDILDFTG 222


>gi|147919413|ref|YP_685765.1| putative farnesyltranstransferase [uncultured methanogenic archaeon
           RC-I]
 gi|116077932|emb|CAJ36439.2| putative farnesyltranstransferase [uncultured methanogenic archaeon
           RC-I]
          Length = 314

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 13/222 (5%)

Query: 16  IDTILDDLLLQTASHMQ----TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           I+ +L+         M           L   +RYAL   GKKIR+ L+T        N  
Sbjct: 8   IEKVLESRATLIDKEMGLLSFVIEPPELAEVVRYALCQKGKKIRASLLTIACEAVGGNIA 67

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+   A +E IH  SL+ DD+  +DN   RRG+ T++ ++    A+IA + LL      
Sbjct: 68  QAMVPAAVVEMIHNTSLVLDDV--IDNAETRRGRSTINHRWGNNMALIACDALLALTIRQ 125

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
            S     + +      ++    N  L  +  G+ L++  +       + I + KT +L  
Sbjct: 126 ASKSSVNMTNA-----IIECAANSMLS-LAEGEALELVGKDYTLKDYYKIAERKTASLFS 179

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + E GA++   +  E + LR +G ++GI FQ+ DD+LD   
Sbjct: 180 ASAEIGALVGGGTSKEVKSLREYGTSIGIAFQIRDDILDVTS 221


>gi|170077205|ref|YP_001733843.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7002]
 gi|169884874|gb|ACA98587.1| Solanesyl diphosphate synthase [Synechococcus sp. PCC 7002]
          Length = 323

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH---LT 71
           ++  L + L +  + + +  +  L +A  +    GGK++R  +V   +     +      
Sbjct: 11  VEADLKE-LSENLTRLISARHPILGAAAEHLFSAGGKRVRPAIVLLASRATLGDRPLTQR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDEAALRRSVPTVNSLFDNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S+++               Q L+  D  ++          KT +L+  
Sbjct: 128 ANLDNLTVVKLLSEVIKDFAEGEI------QQGLNRFDTGMNLEIYIEKSYYKTASLIGN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++ A+++       +RL  +G NLG+ FQ+ DD+LD   
Sbjct: 182 SAKAAAVLSEVDPEIGDRLYDYGRNLGLAFQIVDDILDFTG 222


>gi|194364794|ref|YP_002027404.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194347598|gb|ACF50721.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 332

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 11/192 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV               ++ A IE IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 52  AGGKRLRPMLVMLAGRAVGNVGPEHHQLAAIIEFIHTSTLLHDDV--VDESSLRRGRSTA 109

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +F+++        + +    +L+   N   +G +  Q+L +
Sbjct: 110 NALWGNAPSVLVGDFLYSRSFQLMVEL-----ERMSVMQILADATNRIAEGEVL-QLLHV 163

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   DE     + + KT  L       GA+ +   +  ++ L  +G +LG  FQ+ADD+
Sbjct: 164 HNPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDV 223

Query: 228 LDCE---EDLPK 236
           LD     E+L K
Sbjct: 224 LDYSANAEELGK 235


>gi|119490906|ref|ZP_01623189.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106]
 gi|119453724|gb|EAW34883.1| solanesyl diphosphate synthase [Lyngbya sp. PCC 8106]
          Length = 323

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHL---T 71
           ++T L  LL      +    +  L +A  +     GK++R  +V   +     N      
Sbjct: 11  VETDL-QLLTDNLKQLVGARHPILYAAAEHLFSVHGKRVRPAIVLLISRTTMPNQEITPK 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  ++   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESELRRGSPTVHSLFNNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q L+  D  +           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSKVIMDLAEGEI------QQGLNRFDTGMSINAYLEKSYYKTASLVAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  S    E L  +G+NLG+ FQ+ DD+LD   
Sbjct: 182 SSKAAGLLSGVSAELAEDLYSYGQNLGLAFQIVDDILDFTG 222


>gi|254456546|ref|ZP_05069975.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083548|gb|EDZ60974.1| octaprenyl-diphosphate synthase [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 337

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 117/236 (49%), Gaps = 13/236 (5%)

Query: 5   LPSKLQENSKRIDTILDD--LLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVTE 60
           L +++ ++  ++   ++D  +L +    ++   +  L+  +   +   GGK++R+ L   
Sbjct: 7   LKNQINDSYFQLKESVEDKLVLTEEKIKLKLNSDVELVQKMTNYHIKTGGKRLRALLTLG 66

Query: 61  CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A L   +     + + A +E IH  +L+HDD+  +D G IRRGK T++  +   ++++ 
Sbjct: 67  SAKLCGYSKGSRDVNLAACVELIHGATLMHDDV--IDEGIIRRGKETLNEIWGNHSSVLI 124

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL+  FE++         N+    +LS T +   QG +  Q+    +  + E     
Sbjct: 125 GDYLLSRCFEMMVEDG-----NLEVLKLLSSTSSKIAQGEVL-QLQHKGEVDMLEETYLK 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           I   KT  L   + + GAI++     EK+ L  +G NLG+ FQ+ADD LD   +L 
Sbjct: 179 IISAKTAELFAASTKVGAILSDVDNKEKDALEFYGRNLGLTFQIADDTLDYNSELK 234


>gi|90200410|gb|ABD92707.1| solanesyl diphosphate synthase [Hevea brasiliensis]
          Length = 418

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + +  DL  L Q    +    N  L+SA       GGK++R  LV       A +  + 
Sbjct: 100 FEAVAGDLQTLNQNLRSIVGAENPVLMSAADQIFGAGGKRMRPALVFLVSRATAEIVGLK 159

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    A++AG+ +   
Sbjct: 160 ELTTKHRRLAEIIEMIHTASLIHDDV--LDESNMRRGKQTVHQLYGTRVAVLAGDFMFAQ 217

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +   +++ +      + SQ++               Q   + D  ++  +  +    KT 
Sbjct: 218 SSWYLANLENIEVIKLISQVIKDFASGEI------KQASSLFDCDVELEEYLIKSYYKTA 271

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +    +  E++  +G+NLG+ FQ+ DD+LD  +
Sbjct: 272 SLIAASTKGAAIFSGVDSSVAEQMYEYGKNLGLSFQVVDDVLDFTQ 317


>gi|254414461|ref|ZP_05028227.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC
           7420]
 gi|196178691|gb|EDX73689.1| solanesyl diphosphate synthase [Microcoleus chthonoplastes PCC
           7420]
          Length = 323

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 12/214 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---TALRVGAA 78
           LL +   ++    +  L +A  +    GGK++R  +V   A    ++        R+   
Sbjct: 17  LLTENLKNLVGARHPILYAAAEHLFGAGGKRVRPAIVLLIARATVLDSDITPRHRRLAEI 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL+HDD+  +D   +RR  PTV+  ++   A++AG+ L   +   +++     
Sbjct: 77  TEMIHTASLVHDDV--VDESSVRRNVPTVNSMFNNRVAVLAGDFLFGQSAWYLANLNNLE 134

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              + SQ++  +            Q L   +              KT +L+  + +S  +
Sbjct: 135 VVKLLSQVIKDMAEGEI------QQGLTRFEASTTIDTYLEKTYKKTASLIANSSKSAGL 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++  S    E L  +G +LG+ FQ+ DD+LD   
Sbjct: 189 LSGVSAEVAENLYRYGNHLGLAFQIVDDILDFTA 222


>gi|328945558|gb|EGG39709.1| geranyltranstransferase [Streptococcus sanguinis SK1087]
          Length = 291

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVKAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|325103979|ref|YP_004273633.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
 gi|324972827|gb|ADY51811.1| Polyprenyl synthetase [Pedobacter saltans DSM 12145]
          Length = 324

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 25  LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
            +  ++        L   + Y L LGGK++R  L+     LF  +   A++   AIE  H
Sbjct: 13  QEINTYSYPSSPRNLYEPVSYLLGLGGKRLRPALLLLATDLFGGDVEKAVKPAMAIEFFH 72

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            +SL+HDD+  MD   +RRGKPTVH ++ + TAI++G+ +L  A+++I   +        
Sbjct: 73  NFSLMHDDI--MDKAPLRRGKPTVHEKWSDSTAILSGDIMLIEAYKLICEVEAVKLPACL 130

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
                    N     +  GQ +D+    +EF+   +   + ++KT  L+  A + GA++A
Sbjct: 131 ------KIFNTISTEVCEGQQMDMNFEKEEFVSIEEYIEMIRLKTAVLLGGALKIGAVIA 184

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            AS+N++E +  FG  LG+ FQL DD+LD   D  K
Sbjct: 185 DASENDQELINDFGTKLGVAFQLQDDILDVYGDPEK 220


>gi|254483435|ref|ZP_05096664.1| polyprenyl synthetase superfamily protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036309|gb|EEB76987.1| polyprenyl synthetase superfamily protein [marine gamma
           proteobacterium HTCC2148]
          Length = 320

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 44  RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y +  GGK++R  LV   A+ F       ++  A IE IH  +L+HDD+  +D   +RR
Sbjct: 35  HYIVDAGGKRLRPLLVLLTAAAFGRCGPDQIKFAAVIEFIHTATLLHDDV--VDISSLRR 92

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+PT + ++    +++ G+ L T AF+++         ++     ++ T N   +G +  
Sbjct: 93  GRPTANAEFGNAPSVLVGDFLYTRAFQLMVQLG-----DMDILTHMANTTNTIAEGEVL- 146

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q++   +    E Q   +   KT  L    C   A + H   +  + +  FG NLGI FQ
Sbjct: 147 QLVRAGNADTTEQQYLDVITRKTAILFAAGCYGAATLCHQESSVCQGMHSFGLNLGIAFQ 206

Query: 223 LADDLLDCEED 233
           + DD+LD E D
Sbjct: 207 MIDDILDYEGD 217


>gi|313901601|ref|ZP_07835040.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM
           13965]
 gi|313468131|gb|EFR63606.1| farnesyl-diphosphate synthase [Thermaerobacter subterraneus DSM
           13965]
          Length = 328

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/225 (34%), Positives = 112/225 (49%), Gaps = 13/225 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNH---LTALR 74
            LD +L        T    R+  A+RY+ L GGK +R  L+   A              R
Sbjct: 46  ALDQVLPPV-----TAPPSRIHEAMRYSTLAGGKALRPVLLMAAARCVGGPQVVTPAVER 100

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS- 133
             AA+E +H YSLIHDDLP+MD+  +RRG+P  H+ + E  AI+AG+ LLT AFE+++  
Sbjct: 101 AAAAVELVHTYSLIHDDLPAMDDDDMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGL 160

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMC 190
           P+      +   ++  L    G  G++GGQ+ D+       +D   +  I + KTGAL  
Sbjct: 161 PRWGADPAVALAVVEELAVAAGTAGLIGGQVDDLAATTAAGLDLAGLQSIHRRKTGALFR 220

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                GA +A A+  E E L  F    G  FQ+ DD+LD   D  
Sbjct: 221 ACVRMGARLAGATATELEALTAFATAFGEAFQIVDDILDVTGDEA 265


>gi|228476073|ref|ZP_04060781.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           hominis SK119]
 gi|228269896|gb|EEK11376.1| heptaprenyl diphosphate synthase component 2 [Staphylococcus
           hominis SK119]
          Length = 318

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 26/237 (10%)

Query: 4   GLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
            + S+++   KR+   +   D +L + A H+ +               GGK++R   V  
Sbjct: 5   SMNSEIKNVEKRLKNAIKSNDSVLQEAAFHLLSS--------------GGKRVRPAFVLL 50

Query: 61  CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            +             V  A+E IH  +L+HDD+  +D    RRGK T+  ++D  TAI+ 
Sbjct: 51  SSQFGPKKITEDTYHVAVALELIHMATLVHDDV--IDKSDKRRGKLTIEKKWDVTTAILT 108

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           GN LL    + +S  +       R   ++S       +G L  Q  D  +   + T    
Sbjct: 109 GNFLLALGLKQLSKIEDH-----RVHTIISNAIVDVCRGELF-QFQDQFNSHQNITNYLR 162

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               KT  L+  + E GAI + A      +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 163 RINRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKK 219


>gi|269468820|gb|EEZ80424.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster
           bacterium]
          Length = 323

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 20/242 (8%)

Query: 1   MN--GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
           MN    +   L+ + K+ D +L   L    + +  Q +  +++A      GGK++R  L+
Sbjct: 1   MNNFADIQKLLKSDLKKTDKVLIKRLSSNVA-LINQMSSYIINA------GGKRLRPLLL 53

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
             CA            +   IE IH  +L+HDD+  +D    RRGK T +  +    +++
Sbjct: 54  LLCAKATGYQGNHHHLMAVVIELIHTATLLHDDI--VDESATRRGKDTANEVWGNAASVL 111

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ L + AFE++  P     D++R   +LS T N   +G +  Q+L+ Q+  + E + F
Sbjct: 112 VGDFLYSRAFEMMVEP-----DSMRIMKILSKTTNSIAEGEVL-QLLNCQNSELSEAEYF 165

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
            + + KT  L   + + G I+++A + ++  LR +G +LG  FQ+ DD LD E D   + 
Sbjct: 166 NVIERKTACLFQASTQIGGILSNADEKQELALRNYGLHLGNAFQIIDDALDYESDAQTMG 225

Query: 236 KK 237
           K+
Sbjct: 226 KE 227


>gi|218531359|ref|YP_002422175.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
 gi|218523662|gb|ACK84247.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
          Length = 340

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 9/185 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L   CA L +  +   A+++ AA+E +H  +L+HDD+  +D   +RRG+   
Sbjct: 58  GGKRLRPILTLACADLCDYGSGDGAVKLAAAVEFMHTATLLHDDV--VDESDMRRGRVAA 115

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   
Sbjct: 116 RIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTAA 169

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++    E +   + + KT  L   ACE G ++A   ++E+   R +G NLGI FQL DD+
Sbjct: 170 KNIETSENEYLAVIRGKTAELFAAACEVGPVLAGRPESEQAACRAYGMNLGIAFQLIDDV 229

Query: 228 LDCEE 232
           LD   
Sbjct: 230 LDYGG 234


>gi|27377642|ref|NP_769171.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110]
 gi|27350787|dbj|BAC47796.1| octaprenyl-diphosphate synthase [Bradyrhizobium japonicum USDA 110]
          Length = 335

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L        +++ A++E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 54  GGKRLRPMLTLAMANLAGYTGDGHIKLAASVEFMHTATLLHDDV--VDESEMRRGKLSAR 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 112 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAAATIAEGEVM-QLAAAK 165

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G ++A+  + E+   R  G NLGI FQL DD+L
Sbjct: 166 NTATTEDEYLAVIRGKTAELFAAACEVGPVIANRPKAEQTACRSVGMNLGIAFQLVDDVL 225

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 226 DYGGKSAK 233


>gi|5631299|dbj|BAA82615.1| farnesyl, geranylgeranyl, geranylfarnesyl, hexaprenyl, heptaprenyl
           diphosphate synthase (SelF-HepPS) [Synechococcus
           elongatus]
          Length = 324

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 15/232 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           Q     I+  +   L +      T+    L   +RYAL  GGK++R  +    A     +
Sbjct: 3   QHYRDTIEQAIARALDR------TELPPILDEPVRYALASGGKRLRPLITLLAAEACGSS 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A  V AA+E +H ++LIHDD+  MD   +RRG+PTV+  +D+ TAI+AG+ ++  A+
Sbjct: 57  PADAAPVAAAVEILHNFTLIHDDI--MDRSPLRRGRPTVYRAWDDATAILAGDTMMGIAY 114

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGA 187
            ++S         +   L+   +       +   + L  +    +       +   KT  
Sbjct: 115 RLLSE---HYPAEVCQHLVAECSSAFVDVCIGQAEDLAFRTMPSVTMDDYLRMIGRKTAR 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPKK 237
           L   A  +G I+A A  +    LR +G  LG+ FQ+ DD+LD     +  K+
Sbjct: 172 LFATAAVAGGIVARAPHDVLAALRTYGTALGMAFQIRDDVLDLFGSPEFGKE 223


>gi|152975037|ref|YP_001374554.1| heptaprenyl diphosphate synthase component II [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152023789|gb|ABS21559.1| Heptaprenyl diphosphate synthase component II [Bacillus cytotoxicus
           NVH 391-98]
          Length = 320

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L +T +  Q    +   +A++    GGK+IR   V                V  
Sbjct: 15  NVIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGEYKLDAIKHVAV 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH  SL+HDD+  +D   +RRG  TV+  + +  A+  G+ L   + E I++ +  
Sbjct: 72  ALELIHMASLVHDDV--IDAALLRRGSATVNANWGDRIAMYTGDYLFAKSLECITNLEVP 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S  +L +            Q+ D  +   +        K KT  L+  +C+ GA
Sbjct: 130 EAHQALSYTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGA 183

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           I + AS++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 184 IASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|134100514|ref|YP_001106175.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291005007|ref|ZP_06562980.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133913137|emb|CAM03250.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 345

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR  LV   A     +  TAL    A+E +H +SL+HDD+  MD    RR + T  
Sbjct: 60  GGKAIRPALVVLAAEAVGGSPATALPAAVAVELVHNFSLLHDDV--MDGDLTRRHRATAW 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LLT A +++++          +      T N  +  ++ GQ+ D+ 
Sbjct: 118 RVFGNGPAILAGDALLTLASDVLAASGHP------AAQAGVRTLNTAVLELVDGQVADLA 171

Query: 169 DEFIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D+  V   Q M   KTGAL+  AC  GA     S  + E LR FGE LG+ FQ  D
Sbjct: 172 FEKRDDVGVAECQTMVAGKTGALLGCACAVGADFGGGSTEQVEHLRRFGELLGLAFQHVD 231

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 232 DLLGIWGD 239


>gi|332708306|ref|ZP_08428286.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L]
 gi|332352910|gb|EGJ32470.1| solanesyl diphosphate synthase [Lyngbya majuscula 3L]
          Length = 323

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 12/214 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF---NVNHLTALRVGAA 78
           LL +   ++    +  L +A  +    GGK++R  +V   +      +       R+   
Sbjct: 17  LLSENLKNLIGASHPILYAAAEHLFGAGGKRLRPAIVLLVSRATITNSKITPRHRRLAEI 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL+HDD+  +D   +RR  PTV+  ++   A++AG+ L   +   +++     
Sbjct: 77  TEMIHTASLVHDDV--IDESDVRRTVPTVNSLFNNRIAVLAGDFLFGQSAWYLANLDNLE 134

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              + S+++  +            Q L   D              KT +LM  + ++   
Sbjct: 135 VVKLLSEVIKDMAEGEI------QQGLSRFDTTTTIEGYLAKTYNKTASLMANSAKAAGC 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++  S    E L  +G NLG+ FQ+ DD+LD   
Sbjct: 189 LSGVSDQVAENLYHYGRNLGLAFQIVDDILDFTA 222


>gi|322513608|ref|ZP_08066706.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976]
 gi|322120568|gb|EFX92468.1| octaprenyl-diphosphate synthase [Actinobacillus ureae ATCC 25976]
          Length = 331

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 44  RYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
            Y + GG K+IR  +    A+         +   A IE +H  +L+HDD+  +D   +RR
Sbjct: 41  HYIIAGGGKRIRPLIAVLAANALGYRGDKHVTCAAFIEFVHTATLLHDDV--VDESDMRR 98

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G+ T +  +    +++ G+ + T +F++++S      D++    ++S   N   +G +  
Sbjct: 99  GRATANATFGNAASVLVGDFIYTRSFQMMTS-----VDSLEVLKVMSAATNALAEGEV-Q 152

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q++++ D    E     +   KT  L   A +  AI+A   ++ +  L+ +G  LG  FQ
Sbjct: 153 QLMNVNDPNTTEANYMRVIYNKTARLFEAATQCVAIVAGVEKSVETALKDYGCYLGTAFQ 212

Query: 223 LADDLLDCEE 232
           L DD+LD   
Sbjct: 213 LIDDILDYSA 222


>gi|209886074|ref|YP_002289931.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5]
 gi|209874270|gb|ACI94066.1| octaprenyl-diphosphate synthase [Oligotropha carboxidovorans OM5]
          Length = 336

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAQLAGYVGDGHIKLAAAVEFMHTATLLHDDV--VDESELRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSAAATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G ++A   + E+   R  G NLGI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPVIAERPKAEQTACRAVGMNLGIAFQLVDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGTAAK 234


>gi|327458743|gb|EGF05091.1| geranyltranstransferase [Streptococcus sanguinis SK1057]
          Length = 291

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVKAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKNIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|299134682|ref|ZP_07027874.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
 gi|298590492|gb|EFI50695.1| Polyprenyl synthetase [Afipia sp. 1NLS2]
          Length = 336

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAQLAGYTGDGHIKLAAAVEFMHTATLLHDDV--VDESELRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSSAAATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   A E G ++A+  + E+   R FG NLGI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAASEVGPVIANRPKAEQTASRSFGMNLGIAFQLIDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKAAK 234


>gi|194290326|ref|YP_002006233.1| geranyltranstransferase (=farnesyldiphosphate synthase)
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224161|emb|CAQ70170.1| geranyltranstransferase (=farnesyldiphosphate synthase)
           [Cupriavidus taiwanensis LMG 19424]
          Length = 294

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 9/236 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTEC 61
                 +Q    R +  L   L    +         L  A+RYA L GGK++R  LV   
Sbjct: 2   SDFAQWMQAQGARTEAALQAALPDAGT-----VPHTLHEAMRYAALSGGKRVRPLLVHAA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +             A+E IH YSL+HDD+P MD+  +RRG+PTVH  YDE TA++ G+
Sbjct: 57  GEVSGAAPAACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
            L T AF +++  +  +   +R QL+  L    G  GM GGQ +D+Q+    +    +  
Sbjct: 117 ALQTQAFIVLAGAE-PIAPAVRLQLVAELARASGSAGMAGGQAIDLQNVGRAMTRDALEA 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + +MKTGAL+  +   GA+           L  +   +G+ FQ+ DD+LD   D  
Sbjct: 176 MHRMKTGALLRASVRMGALCGEIDAAGLAALDRYAAAVGLAFQVVDDILDVTADTA 231


>gi|270292608|ref|ZP_06198819.1| geranyltranstransferase [Streptococcus sp. M143]
 gi|270278587|gb|EFA24433.1| geranyltranstransferase [Streptococcus sp. M143]
          Length = 291

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/227 (32%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L++       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALENF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLKELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|254262249|emb|CAZ90576.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter
           helveticus]
          Length = 313

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           +LQ   K I+  LD LL Q      T+ +D +  A+R A L  GK+IR  L+   A    
Sbjct: 15  ELQSMRKNIEHRLDSLLPQ------TEESDLVTQAMRDATLAPGKRIRPLLMLLTARDLG 68

Query: 67  --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +H   L +  A+E IH  SL  DD+P MDN  +RRG PT+H ++ E  AI+A   LL
Sbjct: 69  CEPSHPGLLDLACAVEMIHAASLTLDDIPCMDNAAMRRGLPTIHRKFGENVAILAAVALL 128

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQK 182
           + AF ++S+ +  L D  R+  +  L+  +G QG++ GQ  D+++  E      +     
Sbjct: 129 SKAFGVVSAAE-GLTDAGRAIAVGELSAAVGTQGLVKGQYQDLREGCEPRSTEAIHTTND 187

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KTG L   + +  AI A+AS   + RLR F  + G  FQL DDL+D
Sbjct: 188 LKTGVLFSASLQMAAIAANASGAARARLRSFALDFGQAFQLLDDLID 234


>gi|228926644|ref|ZP_04089713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228945213|ref|ZP_04107569.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090575|ref|ZP_04221810.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-42]
 gi|229121156|ref|ZP_04250393.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           95/8201]
 gi|229138307|ref|ZP_04266902.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST26]
 gi|229183808|ref|ZP_04311025.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC
           6E1]
 gi|228599657|gb|EEK57260.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus BGSC
           6E1]
 gi|228645199|gb|EEL01436.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           BDRD-ST26]
 gi|228662275|gb|EEL17878.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           95/8201]
 gi|228692778|gb|EEL46502.1| Heptaprenyl diphosphate synthase component 2 [Bacillus cereus
           Rock3-42]
 gi|228814448|gb|EEM60713.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228833020|gb|EEM78588.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 305

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 11/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  A
Sbjct: 1   MIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVA 57

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +   
Sbjct: 58  LELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPE 115

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                S  +L +            Q+ D  +   +        K KT  L+  +C+ GAI
Sbjct: 116 AHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAI 169

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 170 AAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 207


>gi|73666686|ref|YP_302702.1| trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake]
 gi|72393827|gb|AAZ68104.1| Trans-hexaprenyltrans transferase [Ehrlichia canis str. Jake]
          Length = 325

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 13/241 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L +    I   LD + +  + H   +H   +   I + +  GGK+IR  +  
Sbjct: 1   MTNEFNNTLLQLKSLIQQDLDAMEILISQH-SDKHIALITEIIHHLIKSGGKRIRPIIFF 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + N  +   + + AAIE IH  +L+HDD+  +D   +RRGK T +  +    +I+ 
Sbjct: 60  IICKMLNCTNENKILIAAAIEFIHNATLLHDDV--IDESDLRRGKKTSNFIWGNKASILV 117

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  +F+ +   K     N+    +LS T N  + G +  QML   +  I + +   
Sbjct: 118 GDFLLAISFQWLIECK-----NLNILSILSQTSNTIVVGEI-QQMLSSHNINISKEKYIE 171

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           I   KT +L    CES A +A  +  E + L+ FG N GI FQ+ DD+LD         K
Sbjct: 172 IISAKTASLFGATCESAAHLAQVNLQESKALKSFGNNFGIAFQIMDDILDYTASNAQFGK 231

Query: 237 K 237
           K
Sbjct: 232 K 232


>gi|325688242|gb|EGD30261.1| geranyltranstransferase [Streptococcus sanguinis SK72]
          Length = 291

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 9/205 (4%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L   I Y++  GGK+IR  L+ E    F +       +V AA+E IH  SLIHDDLP+MD
Sbjct: 27  LSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEMIHTGSLIHDDLPAMD 86

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +   RRG+ T H ++ E  AI+AG+ L    + +++  +++L   ++  L+  L+   G 
Sbjct: 87  DDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLA--RSELPSQVKVDLIYELSLAAGS 144

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            GM+ GQ+LD+Q E   I    +  I   KTG L+ +   +  ++A   Q+ +++LR  G
Sbjct: 145 FGMVAGQVLDMQGEGQAISLEDLKNIHANKTGKLLTYPFVAAGLIAEVEQSVQDKLRRIG 204

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
           E LG+ FQ+ DD+LD     E+L K
Sbjct: 205 ELLGLAFQVRDDILDVTASFEELGK 229


>gi|296447427|ref|ZP_06889352.1| Geranyltranstransferase [Methylosinus trichosporium OB3b]
 gi|296255047|gb|EFH02149.1| Geranyltranstransferase [Methylosinus trichosporium OB3b]
          Length = 338

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 8/189 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV   A +        ++  A IE +H  +L+HDD+  +D   +RRGK   
Sbjct: 56  AGGKRLRPMLVLATAGMCGYRGDGHIKFAAGIEFMHTATLLHDDV--VDESDMRRGKIAA 113

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            + +   T ++ G+ LL +AF+++  P      ++ SQ    +     L      Q+   
Sbjct: 114 RMLWGNETCVLVGDFLLGHAFKMMVEPGVLPCLSVVSQAAAVIAEGEIL------QLNSA 167

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   A E G +++   + ++   R +G NLGI FQL DD 
Sbjct: 168 KDTQTTEDAYMAVIRSKTAELFAAAAEVGPMLSGRPKADEAACRSYGMNLGIAFQLIDDA 227

Query: 228 LDCEEDLPK 236
           LD      K
Sbjct: 228 LDYGGQSAK 236


>gi|307824936|ref|ZP_07655158.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
 gi|307733983|gb|EFO04838.1| Polyprenyl synthetase [Methylobacter tundripaludum SV96]
          Length = 336

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 13/203 (6%)

Query: 39  LLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L++ + + ++G  GK++R  L+   A      +   L + A IE IH  +L+HDD+  +D
Sbjct: 45  LINQMGHYIVGSGGKRLRPMLLLLAAKALGGANDNHLLMAAVIEFIHTATLLHDDV--VD 102

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRGK + +  +    +I+ G+ L + AFE++         N+R   +LS T     
Sbjct: 103 DSDLRRGKESANAVWGNAASILVGDYLYSSAFEMMVRTG-----NMRVMEILSKTTTAIA 157

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +G +  Q+L+  +    E +   +   KT  L   A +  A++A AS   ++ L  +G++
Sbjct: 158 EGEVL-QLLNCNNPETTEQKYLEVIARKTAILFSAATKLAAVIAGASTETEQGLSLYGQH 216

Query: 217 LGIIFQLADDLLDCEE---DLPK 236
           LGI FQL DD LD +    +L K
Sbjct: 217 LGIAFQLIDDALDYKASKDELGK 239


>gi|2547044|dbj|BAA22867.1| solanesyl diphosphate synthase [Rhodobacter capsulatus]
          Length = 325

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 16/190 (8%)

Query: 48  LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A      N   A ++ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAAYACGETNLKHAQKLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              ++L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLIARAFDLLVDLDN---------MILLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A      +E LR F  + G  FQ+
Sbjct: 154 LQAQHQPDTTEDIYLQIIHGKTSRLFELATEGAAILAG-KPEYREPLRRFAGHFGNAFQI 212

Query: 224 ADDLLDCEED 233
            DD+LD   D
Sbjct: 213 IDDILDYTSD 222


>gi|332664666|ref|YP_004447454.1| trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333480|gb|AEE50581.1| Trans-hexaprenyltranstransferase [Haliscomenobacter hydrossis DSM
           1100]
          Length = 322

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 13/231 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFN 66
           L    K ID  L          M++     LL  I Y +    GK++R   V   A +  
Sbjct: 3   LDTIKKPIDQELIKFEQHFKQSMRSSVP--LLDKITYYIVRRKGKQVRPMFVFLAAQVCG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                     + IE +H  +L+HDD+  +D+   RRG  +V+  +    A++ G+ LL+ 
Sbjct: 61  GVVEATYVAASLIELLHTATLVHDDV--VDDSMERRGFFSVNALWKNKIAVLVGDFLLSQ 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +    K       R   ++S       +G L  Q+   +   I E   + I + KT 
Sbjct: 119 GLLLAVRNK-----QFRILEIVSDAVKAMSEGELL-QIEKARRLDIKEEVYYEIIRQKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
           +L+  AC++GA  A   ++  ER+R FGE +G+ FQ+ DDL D   +D+ K
Sbjct: 173 SLISSACQAGAASATTDEDAIERMRLFGEKIGLAFQIKDDLFDFGTDDVGK 223


>gi|317969726|ref|ZP_07971116.1| solanesyl diphosphate synthase [Synechococcus sp. CB0205]
          Length = 323

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + +++ L+ LL    S +   H     +A      GGK++R  +V   +    
Sbjct: 2   ATVAELLQPVESDLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALA 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PQGELTSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDNLEVVKLLSRVIMDLADGEVKQGLYR------YDTGQSFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  +  +  +++   +++ + L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSARAAGVLSGLPEDQLDCLYRFGRQLGLAFQVVDDILDFTG 222


>gi|260548979|ref|ZP_05823201.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624]
 gi|260408147|gb|EEX01618.1| trans-hexaprenyltranstransferase [Acinetobacter sp. RUH2624]
          Length = 325

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A    +++   A R+ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAARACGLDNMQHAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              + L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLIARAFDLLVDLNN---------MTLLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A   +  +E LR F  + G  FQ+
Sbjct: 154 LQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQI 212

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 213 IDDILDYTSDAE 224


>gi|323352717|ref|ZP_08087687.1| geranyltranstransferase [Streptococcus sanguinis VMC66]
 gi|322121753|gb|EFX93499.1| geranyltranstransferase [Streptococcus sanguinis VMC66]
          Length = 291

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 124/233 (53%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    + +I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLASGSFGMVAGQVLDMQGEGQAISLEDLKIIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|21243633|ref|NP_643215.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21109209|gb|AAM37751.1| octaprenyl-diphosphate synthase [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 332

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 18/226 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 25  AAVDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHH 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 78  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 136 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             GA+ + AS   +++L  +G  LG  FQ+ADD+LD      DL K
Sbjct: 190 RLGALASGASAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAADLGK 235


>gi|148654702|ref|YP_001274907.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
 gi|148566812|gb|ABQ88957.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
          Length = 338

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 10/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + + ++      D  +         H+  + ++ L  A       GK +R  L      
Sbjct: 9   AIEAAMRAAFPLADERVARFYAMQEYHLGWR-DEELRPA---TFDPGKLLRPRLCLLSCR 64

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +   AL + AAI+ IH +SLIHDD+   D    RRG+PTV   +     I  G+G+
Sbjct: 65  AVGGDPRDALPLAAAIQLIHDFSLIHDDIQ--DQSDTRRGRPTVWKLWGLAQGINTGDGM 122

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
            T A   +               +L       L  +  GQ LD+  E    IDE     +
Sbjct: 123 FTVAHLSLHRLALTSLPAATILDVLRRFDETILT-ICEGQFLDLSYEGNLEIDEAAYLAM 181

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + KT AL+  + E GA++  A +   + L  FG  LG+ FQ+ DD+L    D
Sbjct: 182 IERKTAALIAASAELGALVGGADEETIQALSDFGRALGLAFQIEDDVLGIWGD 234


>gi|78188931|ref|YP_379269.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3]
 gi|78171130|gb|ABB28226.1| polyprenyl synthetase [Chlorobium chlorochromatii CaD3]
          Length = 324

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 9/214 (4%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L  +    +    N  +    RY L   GK+IR  +V   A+L    + ++ R    +E 
Sbjct: 16  LFQEKYRVVLHSRNTLVDKVSRYVLKQQGKQIRPAIVLLSANLCGGVNESSYRAAIMVEL 75

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  +LIHDD+  +D   +RRG P+++  +    +++ G+ +L                +
Sbjct: 76  LHSATLIHDDV--VDGAEMRRGLPSINALWKNKISVLMGDYMLARGLLYSLDHNDYGFLH 133

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           + S+ +  ++    L      Q+   +   I E     +   KT +L+  +C  GA+ A 
Sbjct: 134 MVSEAVRRMSEGEIL------QIQKTRSLDITEKDYLSVISDKTASLISSSCAMGAMSAT 187

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             ++    L+ +GE LG+ FQ+ DDLLD   D  
Sbjct: 188 TDESNIAALKNYGEYLGLAFQIRDDLLDYTGDSK 221


>gi|57505616|ref|ZP_00371543.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195]
 gi|57016163|gb|EAL52950.1| geranyltranstransferase (ispA) [Campylobacter upsaliensis RM3195]
          Length = 268

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+      +       AL    A+E IH YSLIHDDLP+MDN   RR  PT
Sbjct: 24  AGGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYSLIHDDLPAMDNADFRRSTPT 83

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     L   I  +L+ +L  N GL GM+ GQ +D
Sbjct: 84  LHKSYDETTAILVGDALNTEAFLLLSRLN--LSATISLKLVETLAFNAGLNGMIIGQAID 141

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ ++  ++  +   KT  L+  + + G  +    +   ++L   G  LG+IFQ+ 
Sbjct: 142 CYFEDQKLNLKELEFLHTHKTAKLIAASLKMGCQICELDETITKQLYELGLKLGLIFQIN 201

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 202 DDIIDAT 208


>gi|325859901|ref|ZP_08173031.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
 gi|327312867|ref|YP_004328304.1| polyprenyl synthetase [Prevotella denticola F0289]
 gi|325482827|gb|EGC85830.1| polyprenyl synthetase [Prevotella denticola CRIS 18C-A]
 gi|326945844|gb|AEA21729.1| polyprenyl synthetase [Prevotella denticola F0289]
          Length = 326

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLT 71
            + ID  LDD +    +H     +  L + + +     GK++R  L+   A  F      
Sbjct: 8   KRPIDVELDDFI-DLFNHALDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGKVSEA 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                  +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+ +L+ A   +
Sbjct: 67  TQHAAVGLELLHTASLVHDDV--VDESAERRGQASVNADYDNKVAVLVGDYVLSTALLYV 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S   ++      + L  +L+    L      Q+ +IQ + I E   + I + KT AL   
Sbjct: 125 SHTHSEAIVRRLAGLGQTLSDGEIL------QLSNIQCKDITEEAYYRIIERKTAALFEA 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
               GA+ A AS+ E +  RCFG+NLGI+FQ+ DD+ D  
Sbjct: 179 CAAIGAVSAGASEEEVDAARCFGKNLGIVFQIRDDIFDYY 218


>gi|92430262|gb|ABE77350.1| CrtE [Pantoea sp. C1B1Y]
          Length = 303

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 81/226 (35%), Positives = 118/226 (52%), Gaps = 12/226 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA-- 72
           I+  LD LL   +        D + +A+R  AL  GK+IR  L+   A     N   A  
Sbjct: 24  IEQRLDQLLPVESER------DLVGAAMRDGALATGKRIRPLLLLLAARDLGCNATPAGL 77

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +  A+E +H  SLI DD+P MD+  +RRG+PT+H QY E  AI+A   LL+ AF +++
Sbjct: 78  LDLACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVA 137

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMC 190
           + +  L    R+  +  L+H +G+QG++ GQ  D    D+      + M    KT  L C
Sbjct: 138 AAE-GLTATTRADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILMTNHYKTSTLFC 196

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + +  +I+A AS   +E+L  F  NLG  FQL DDL D   D  K
Sbjct: 197 ASMQMASIVAEASGEAREQLHRFSLNLGQAFQLLDDLTDGMADTGK 242


>gi|269926471|ref|YP_003323094.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790131|gb|ACZ42272.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 322

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 15/220 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
            ++++  L + + +    + +     +       L GGK++R  LV    S+ + +H   
Sbjct: 14  LRQVEQKLLESVPEEIPELASVVRSLI-------LAGGKRLRPALVFLSGSINSPDHEKL 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E +H  +LIHDD  ++D   +RRG  T +  +     I+ G+ L   A    +
Sbjct: 67  LNAAVAVELLHTATLIHDD--TIDQADVRRGIATANSIFGPGVVILLGDFLFAKAAHYAA 124

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                   ++ +++++     + + G L  Q L   +    E + +     KT AL    
Sbjct: 125 MTSDPEAIDLFAKVLM-----VIVDGELR-QSLGKHNGVPSEEEYYRRIYAKTAALFECC 178

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E+GAI++ A +  +  L  +G+ LG+ FQ+ DDLLD   
Sbjct: 179 TETGAILSKAPEPHRRALTTYGKKLGLAFQIIDDLLDFTS 218


>gi|314936397|ref|ZP_07843744.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655016|gb|EFS18761.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           hominis subsp. hominis C80]
          Length = 318

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 26/237 (10%)

Query: 4   GLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
            + S+++   KR+   +   D +L + A H+ +               GGK++R   V  
Sbjct: 5   SMNSEIKNVEKRLKNAIKSNDSVLQEAAFHLLSS--------------GGKRVRPAFVLL 50

Query: 61  CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            +             V  A+E IH  +L+HDD+  +D    RRGK T+  ++D  TAI+ 
Sbjct: 51  SSQFGPKKITEDTYHVAVALELIHMATLVHDDV--IDKSDKRRGKLTIEKKWDITTAILT 108

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           GN LL    + +S  +       R   ++S       +G L  Q  D  +   + T    
Sbjct: 109 GNFLLALGLKQLSKIEDH-----RVHTIISNAIVDVCRGELF-QFQDQFNSHQNITNYLR 162

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               KT  L+  + E GAI + A      +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 163 RINRKTALLIQLSTEVGAITSQADNETIRKLKMIGHYIGMSFQIVDDILDFTSTEKK 219


>gi|125717531|ref|YP_001034664.1| farnesyl diphosphate synthase [Streptococcus sanguinis SK36]
 gi|125497448|gb|ABN44114.1| Farnesyl diphosphate synthase, putative [Streptococcus sanguinis
           SK36]
          Length = 291

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 124/233 (53%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YKSQQVSSDLAEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    + +I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKIIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|172037378|ref|YP_001803879.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142]
 gi|171698832|gb|ACB51813.1| solanesyl diphosphate synthase [Cyanothece sp. ATCC 51142]
          Length = 327

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 12/215 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---TALRVGA 77
            LL      +    +  L +A  +    GGK+IR  +V   +    ++        R+  
Sbjct: 20  RLLTDNLKRLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLDSDITPRHRRLAE 79

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +++    
Sbjct: 80  ITEMIHTASLVHDDV--VDEAALRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNL 137

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               + S+++         QG+      +  D  +           KT +L+  + +S A
Sbjct: 138 EVVKLLSEVIRDFAEGEIFQGI------NRFDTSLTLDAYLDKSYYKTASLIANSAKSAA 191

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I++ +S    + L  +G  LG+ FQ+ DD+LD   
Sbjct: 192 ILSDSSTEVIDSLYAYGRYLGLAFQIVDDILDFTS 226


>gi|146343288|ref|YP_001208336.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278]
 gi|8650415|gb|AAF78199.1|AF218415_1 geranylgeranyl synthase [Bradyrhizobium sp. ORS278]
 gi|146196094|emb|CAL80121.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           (Farnesyltranstransferase) [Bradyrhizobium sp. ORS278]
          Length = 316

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 8/234 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
                ++L     RI   + + +        T     L + + +A L GGK+ R  LV  
Sbjct: 10  TAAFETQLDRWRGRIGEAVAEAMA-----FGTTVPAPLQAGMSHAVLAGGKRYRGMLVLA 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             S   V     L    AIE IH  SL+ DDLP MD+   RR +P  H+ + E TAI++ 
Sbjct: 65  LGSDLGVPEEQLLSSAVAIETIHAASLVVDDLPCMDDARRRRSQPATHVAFGEATAILSS 124

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFM 179
             L+  A E+++  + QL    RS ++ +L+H IG Q + GGQ  D+   +   E  +  
Sbjct: 125 IALIARAMEVVARDR-QLSPASRSSIVDTLSHAIGPQALCGGQYDDLYPPYYATEQDLIH 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + KT AL   A    A++A        R+   G+ LG+ FQ+ DDLLD   D
Sbjct: 184 RYQRKTSALFVAAFRCPALLAEVDPETLLRIARAGQRLGVAFQIFDDLLDLTGD 237


>gi|238757559|ref|ZP_04618744.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236]
 gi|238704321|gb|EEP96853.1| Octaprenyl-diphosphate synthase [Yersinia aldovae ATCC 35236]
          Length = 323

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A   +      + V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLVARALHYKGSKHITVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++  ++     +R   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRAFQMMTGLES-----LRVLTLMSAATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  I E     +   KT  L   A +S A++A AS+ ++  L+ +G  LG  FQL DDLL
Sbjct: 155 NPDITEENYMQVIYSKTARLFEAAAQSAAVLAEASEEQELALQNYGRYLGTAFQLIDDLL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYSSD 219


>gi|126642763|ref|YP_001085747.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978]
 gi|126388647|gb|ABO13145.1| solanesyl diphosphate synthase [Acinetobacter baumannii ATCC 17978]
          Length = 325

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A   ++++   A R+ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAARACDLDNMQNAQRLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              + L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLIARAFDLLVDLNN---------MTLLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A   +  +E LR F  + G  FQ+
Sbjct: 154 LQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQ-EAYREPLRLFAGHFGNAFQI 212

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 213 IDDILDYTSDAE 224


>gi|308069508|ref|YP_003871113.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
           subunit 2) [Paenibacillus polymyxa E681]
 gi|305858787|gb|ADM70575.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
           subunit 2) [Paenibacillus polymyxa E681]
          Length = 324

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 9/216 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           + + +            +     + L  GGK++R   V         +     R+   +E
Sbjct: 15  NFIEEELYRSIDSTEPLINDTSLHLLKAGGKRLRPVFVLLGGKFGEYDLDKLKRIAVPLE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+  +RRG+PTV  ++D   A+  G+ +   A  I +        
Sbjct: 75  LIHSASLVHDDV--IDDAEMRRGQPTVKSKWDNRVAMYTGDYIYARALSIAAGLPNPDIH 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + S+ ++ ++           Q+ D  +         +  + KT  L+  +C+ GA+ A
Sbjct: 133 RVLSKALVQMSIGE------MEQIRDFFNVDQSVRNYLLRIRRKTALLIAVSCQLGAMAA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A ++    L  +G N+G+ FQ+ DDLLD      K
Sbjct: 187 GARESVNSLLYSYGYNVGMAFQIQDDLLDLCGTEKK 222


>gi|327473380|gb|EGF18800.1| geranyltranstransferase [Streptococcus sanguinis SK408]
          Length = 291

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V +A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|313887972|ref|ZP_07821650.1| putative geranyltranstransferase [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845927|gb|EFR33310.1| putative geranyltranstransferase [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 285

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 81/230 (35%), Positives = 126/230 (54%), Gaps = 10/230 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALL-GGKKIRSFL-VTECASLFNVNH 69
           + +D +L+      +S ++  ++   +++ +++Y+L  GGK+IR  L +         + 
Sbjct: 2   RDLDNLLEKFNNYLSSLLEYDNSPQHKVIDSMKYSLFSGGKRIRPLLSLITFCEFSEDSL 61

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L   AAIE IH YSLIHDDLP+MD+   RR KPT H  Y E  AI+AG+GLL  + E
Sbjct: 62  DKILPFAAAIEMIHTYSLIHDDLPAMDDDDFRREKPTNHKVYSEGIAILAGDGLLNMSME 121

Query: 130 IISSPKTQLKD----NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKM 183
           I+      ++D        + M  + +  G+ GM+GGQ +DI  +  D  E     + K+
Sbjct: 122 ILLRHIENIEDPEDLKRAMRAMKYIYNATGVNGMIGGQTIDISRDVSDYTEDDCENMYKL 181

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  +   G I+A    +   +L  FGE++GI +Q  DDLLD E+D
Sbjct: 182 KTGALIKASVVVGGIIAGLDPDNITKLARFGESIGIAYQFEDDLLDEEKD 231


>gi|262368900|ref|ZP_06062229.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
 gi|262316578|gb|EEY97616.1| polyprenyl synthetase [Acinetobacter johnsonii SH046]
          Length = 303

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 84/234 (35%), Positives = 123/234 (52%), Gaps = 13/234 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
            + LQ+  +RI    DDLL    +       + L SA+ +A+ LGGK++R  L    A L
Sbjct: 9   ANALQQAQQRIH---DDLLTALDAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATAHL 62

Query: 65  -FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N N     R   A+E IHCYSL HDDLP MDN  +RRG+PT H+ Y E TA++AG+ L
Sbjct: 63  NPNNNAAAVRRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAYGEDTALLAGDIL 122

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDEF--IDETQVFM 179
            + AFEI+ S        +   ++L            M+ GQ+LD+Q E   +D+T +  
Sbjct: 123 QSMAFEILGSRLFDAGPVVDQGIVLKQMQILATASSKMVCGQVLDLQAEGKRVDQTALEN 182

Query: 180 IQKMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I + KTGAL+  A    A+ +         +LR + + +G+ FQ+ DD+LD   
Sbjct: 183 IHRNKTGALISAAVMMAAVTVFDGCDQAIPKLREYAQAIGLAFQVQDDILDIIS 236


>gi|307703537|ref|ZP_07640479.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
 gi|307622944|gb|EFO01939.1| geranyltranstransferase [Streptococcus oralis ATCC 35037]
          Length = 291

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLESLKVV 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IQPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKEFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLSSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLSLEELQAIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A      + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELEPEIQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|315639120|ref|ZP_07894287.1| geranyltranstransferase [Campylobacter upsaliensis JV21]
 gi|315480824|gb|EFU71461.1| geranyltranstransferase [Campylobacter upsaliensis JV21]
          Length = 277

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+      +       AL    A+E IH YSLIHDDLP+MDN   RR  PT
Sbjct: 33  AGGKYFRAQLLLNVVYFYKKERFKEALDAALALEFIHTYSLIHDDLPAMDNADFRRSTPT 92

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     L   I  +L+ +L  N GL GM+ GQ +D
Sbjct: 93  LHKSYDETTAILVGDALNTEAFLLLSRLN--LSATISLKLVETLAFNAGLNGMIIGQAID 150

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ ++  ++  +   KT  L+  + + G  +    +   ++L   G  LG+IFQ+ 
Sbjct: 151 CYFEDQKLNLKELEFLHTHKTAKLIAASLKMGCQICELDETITKQLYELGLKLGLIFQIN 210

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 211 DDIIDAT 217


>gi|182415631|ref|YP_001820697.1| polyprenyl synthetase [Opitutus terrae PB90-1]
 gi|177842845|gb|ACB77097.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
          Length = 325

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 41/265 (15%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
              ++L+  +  ++  ++  L   A+        RL  A+RY+L  GGK++R  L+   A
Sbjct: 2   DFAAELRRLTSLVEEGIERHLPPAATR-----PGRLHEAMRYSLQAGGKRLRPVLLLASA 56

Query: 63  SLFNVNHLT-----------------------ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
            L   +  +                       AL    AIEC+H YSLIHDDLP MD+  
Sbjct: 57  ELCGGSGHSPSLQQSATPEPPAGRRGDLVTALALPAAVAIECLHTYSLIHDDLPCMDDDD 116

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PT H  +DE TA++AG+ LLT+AF +++      +  +   L+  L    G + +
Sbjct: 117 LRRGRPTAHKAFDEATALLAGDALLTHAFALLAENYAS-QPALAMALIRELADAAGSRRL 175

Query: 160 LGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMA--------HASQNEKE 208
           +GGQM D+  E        ++  I   KT A++  +   G  +          A   E  
Sbjct: 176 IGGQMEDLLAEKKADATAEELEFIHLNKTAAMIEASLVMGGWIGLHAQTAAPGALPPEIT 235

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            LR  G +LG+ FQ+ DD+LD   D
Sbjct: 236 ALRAAGRHLGLAFQIIDDVLDATAD 260


>gi|327398180|ref|YP_004339049.1| polyprenyl synthetase [Hippea maritima DSM 10411]
 gi|327180809|gb|AEA32990.1| Polyprenyl synthetase [Hippea maritima DSM 10411]
          Length = 316

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 25/241 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN  L   ++++ K ++  L  L+   ++  +  +   +          GK++R  LV  
Sbjct: 1   MNIKLKLAIKKDIKAVNEALAVLIKPESNLTRKVYEQVIGD--------GKRLRPLLVLY 52

Query: 61  CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            AS   ++    AL VG+A+E IH  SL+HDD+  +D+   RRGKP  H  Y    A++ 
Sbjct: 53  SASALGIDEPKDALVVGSAVELIHTASLLHDDI--IDDALYRRGKPASHTVYGIKPAVMG 110

Query: 120 GNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
           G+ L + A+ I+      +   I R+  +LS       +G +  ++       I     +
Sbjct: 111 GDYLYSLAYNIVLDYDVDVAKAISRAAYILS-------EGEIE-EIEQAFKVNIGFDDYY 162

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LP 235
            +   KT  L+  +CESGAI+A  ++      + +G+NLG+ FQ+ DD LD + D   L 
Sbjct: 163 RVIYKKTAVLIEASCESGAILA--NKQFSPVFKEYGKNLGLAFQIKDDCLDYQADPEVLG 220

Query: 236 K 236
           K
Sbjct: 221 K 221


>gi|300508789|pdb|3NPK|A Chain A, The Crystal Structure Of Geranyltranstransferase From
           Campylobacter Jejuni
 gi|300508790|pdb|3NPK|B Chain B, The Crystal Structure Of Geranyltranstransferase From
           Campylobacter Jejuni
          Length = 291

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 5/187 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK  R+ L+           L  AL V  A+E IH YSLIHDDLP+ DN   RRG PT
Sbjct: 37  AGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAXDNADFRRGIPT 96

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  YDE TAI+ G+ L T AF ++S     LKD I+ +L+ +L  N GL G + GQ +D
Sbjct: 97  LHKSYDETTAILVGDALNTEAFLVLSHA--HLKDEIKIKLIKTLAFNAGLNGXVIGQAID 154

Query: 167 I--QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +D+ +   ++  +   KT  L+  A + G  +   +  E  ++   G  LG+IFQ+ 
Sbjct: 155 CFFEDKRLSLNELEFLHTHKTARLIAAALKXGCEICELNNEESNQIYKLGLKLGLIFQIN 214

Query: 225 DDLLDCE 231
           DD++D  
Sbjct: 215 DDIIDVT 221


>gi|304438325|ref|ZP_07398266.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304368691|gb|EFM22375.1| heptaprenyl diphosphate synthase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 321

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           +QE+   ++  L++ ++     +           +     GGK++R  L    A    + 
Sbjct: 5   IQEDLAALEPALEEAIVSETPLITDVG-------MHLVSSGGKRLRPALFLLAARGGASF 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+ V  A+E IH  SL+HDD+  +D    RRG  T + ++    AI++G+ +   A
Sbjct: 58  DRARAMPVAVALELIHTASLVHDDV--IDEADTRRGAETTNAKWGNQIAILSGDYIFARA 115

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++         ++   ++       +      Q   +      E   +   + KT  
Sbjct: 116 FKLVAEEGYDSSVYVKLAHLVCTLSEGEIL-----QDHTVYQIPTGEDAYYERIRKKTAD 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            +   CE G  +   S  +  ++  +G ++G+ FQ+ DDLLD     ED+ K
Sbjct: 171 FLEICCELGGFIGGMSPADTAQMAEYGRDIGMAFQITDDLLDFRRSSEDIGK 222


>gi|154245320|ref|YP_001416278.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
 gi|154159405|gb|ABS66621.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
          Length = 335

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTAS--HMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
             L + ++ + +R++  +   L +T S   M  +  + L+S+      GGK++R  L   
Sbjct: 15  EALVALVKADMERVNATI---LARTGSDVAMIPEVANHLISS------GGKRLRPMLTLA 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           CASL        +++ A++E +H  +L+HDD+  +D   +RRGK      +    +++ G
Sbjct: 66  CASLSGYRGDGHVKLAASVEFMHTATLLHDDV--VDESDMRRGKLAARKLWGNEASVLVG 123

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL  AF+++    +     +    +L+    +  +G +  Q+   ++    E     +
Sbjct: 124 DFLLGQAFKMMVEVGS-----MTCLDILATAACVIAEGEVM-QLAAAKNTATSEDDYLAV 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KT  L   ACE GA++    + E+   R +G NLGI FQL DD LD      K
Sbjct: 178 IRGKTAELFAAACEVGAVLGQRPKAEQAACRSYGMNLGIAFQLVDDALDYGGSQAK 233


>gi|281207569|gb|EFA81752.1| trans-prenyltransferase [Polysphondylium pallidum PN500]
          Length = 529

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 24/204 (11%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNV-------------NHLTALRVGAAIECIHCYSLI 88
           A  Y  L GK+IR  ++   A   ++                  +R+   +E IH  SL+
Sbjct: 236 AAYYFDLKGKRIRPTILLLLARALSIANSANPANQSAIQPSSVQMRLAEIVEMIHTASLV 295

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D+   RR  P+++  Y    AI+ G+ LL+ A  ++S+ K      + S ++ 
Sbjct: 296 HDDV--IDDADTRRDVPSINHTYSNKLAILCGDFLLSRASVLLSTLKNHEVTELMSTVI- 352

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                     ++ G+ + I+              +KT +L+  +C S AI++ + +   +
Sbjct: 353 --------SDLVEGEFMQIKASGSSFDIYIRKTYLKTASLIANSCRSTAILSGSDRQVID 404

Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
               FG+NLG+ FQ+ DDLLD   
Sbjct: 405 IATDFGKNLGLAFQIVDDLLDFTS 428


>gi|255318820|ref|ZP_05360046.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82]
 gi|262378919|ref|ZP_06072076.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164]
 gi|255304076|gb|EET83267.1| octaprenyl-diphosphate synthase [Acinetobacter radioresistens SK82]
 gi|262300204|gb|EEY88116.1| solanesyl diphosphate synthase [Acinetobacter radioresistens SH164]
          Length = 325

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 16/190 (8%)

Query: 48  LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A      N   A ++ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAAYACGETNLKHAQKLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L+  AF+++              ++L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLIARAFDLLVDLDN---------MILLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI+A      +E LR F  + G  FQ+
Sbjct: 154 LQAQHQPDTTEAVYLQIIHGKTSRLFELATEGAAILAG-KPEYREPLRRFAGHFGNAFQI 212

Query: 224 ADDLLDCEED 233
            DD+LD   D
Sbjct: 213 IDDILDYTSD 222


>gi|220910193|ref|YP_002485504.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425]
 gi|219866804|gb|ACL47143.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 7425]
          Length = 323

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 18/229 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHL--- 70
           ++  L  LL +    +    +  L +A  + L G  GK+IR  +V   A   + +     
Sbjct: 11  VEADL-RLLTENLKKLIGARHPVLYAAAEH-LFGAEGKRIRPAIVLLLARAISPSQEISS 68

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
              R+    E IH  SL HDD+  +D   +RRG PTVH  +    AI AG+ L   A   
Sbjct: 69  RHRRLAEITEMIHTASLFHDDV--VDQSDLRRGLPTVHSLFGNRIAIQAGDFLFAQASWY 126

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++         + SQ++               Q  +  D  +           KT +L+ 
Sbjct: 127 LADLDNLTVVKLLSQVIKDFAEGEI------QQGFNRFDTSLTMAAYLDKTYYKTASLIA 180

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            + ++  +++  S    + L  +G ++G+ FQ+ DD+LD     +DL K
Sbjct: 181 NSSKAVGVLSGISAQSSQSLYEYGRHVGLAFQIVDDILDFTRSTDDLGK 229


>gi|170751717|ref|YP_001757977.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170658239|gb|ACB27294.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 339

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)

Query: 49  GGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GGK++R  L   CA L          +++ A++E +H  +L+HDD+  +D   +RRG+  
Sbjct: 56  GGKRLRPILTLACAQLCGYAGATEGDVKLAASVEFMHTATLLHDDV--VDESDMRRGRVA 113

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
             I++    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+ +
Sbjct: 114 ARIKWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAATVIAEGEVM-QLTN 167

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            ++   DE     + + KT  L   ACE G ++A   + E+   R +G NLGI FQL DD
Sbjct: 168 AKNLETDEAAYLAVIRGKTAELFAAACEVGPVLAGRPEAEQAAARSYGMNLGIAFQLIDD 227

Query: 227 LLDC---EEDLPK 236
           +LD      +L K
Sbjct: 228 VLDYGGTSAELGK 240


>gi|88607042|ref|YP_505772.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ]
 gi|88598105|gb|ABD43575.1| octaprenyl-diphosphate synthase [Anaplasma phagocytophilum HZ]
          Length = 316

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 22/240 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   + S+LQE          + L+    H + Q    ++      L GGK+ R  ++  
Sbjct: 1   MKLLVASELQEM---------ESLIVKQRHSEVQLIADIIQ--HLILSGGKRTRPVMLLA 49

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +        + V AAIE +H  +L+HDD+  +D   +RRG  T +  +    +I+ G
Sbjct: 50  ACGMLGCTDARRIVVAAAIEFLHSATLLHDDV--VDKSDMRRGVETANSIWGNKASILVG 107

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   AF+ I S  +     I+   +LS T +I + G    Q++      I  T+   I
Sbjct: 108 DFLFATAFQWIVSCNS-----IQLLSVLSNTASIIVSGE-MQQLVHSSSLDISRTKYLEI 161

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
              KT  L   ACES A++      ++  LR +G N GI+FQ+ DD+LD      +L K+
Sbjct: 162 ISSKTAVLFSAACESAAVLHDVGTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGKR 221


>gi|190573198|ref|YP_001971043.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas
           maltophilia K279a]
 gi|190011120|emb|CAQ44729.1| putative octaprenyl-diphosphate synthase [Stenotrophomonas
           maltophilia K279a]
          Length = 332

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 11/192 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV               ++ A IE IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 52  AGGKRLRPMLVMLAGHAVGQAGPEHHQLAAIIEFIHTSTLLHDDV--VDESSLRRGRSTA 109

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +F+++        + +    +L+   N   +G +  Q+L +
Sbjct: 110 NALWGNAPSVLVGDFLYSRSFQLMVEL-----ERMPVMQILADATNRIAEGEVL-QLLHV 163

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   DE     + + KT  L       GA+ +   +  ++ L  +G +LG  FQ+ADD+
Sbjct: 164 HNPDTDEAAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDV 223

Query: 228 LDCE---EDLPK 236
           LD     E+L K
Sbjct: 224 LDYSANAEELGK 235


>gi|326403627|ref|YP_004283709.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301]
 gi|325050489|dbj|BAJ80827.1| octaprenyl-diphosphate synthase [Acidiphilium multivorum AIU301]
          Length = 344

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 12/228 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHM--QTQHNDRLLS--AIRYALLGGKKIRSFLVTECASLF 65
           ++   R+  +L D L +T   +  +   +  L+   A      GGK++R  L    A L 
Sbjct: 20  EDALHRLAVVLQDDLTETNRTILARMASDVELIPQLAAHLIAAGGKRLRPLLTLAAARLC 79

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  + + A +E IH  +L+HDD+  +D   +RRG  + +  +    +++ G+ L  
Sbjct: 80  GYRGERHIHLAACVEFIHTATLLHDDV--VDESGLRRGLASANAVFGNKASVLVGDFLFA 137

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AFE++    +     +    +L        +G +  Q+    D   D  + F + + KT
Sbjct: 138 RAFELMVEDGS-----LDVLRILCNASATIAEGEVL-QLTTQNDLSTDIPRYFKVIEGKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            AL   ACE G ++A         L  +G  LG+ FQL DD LD   D
Sbjct: 192 AALFAAACEVGGVVADRDSAVCGALAGYGAALGMAFQLVDDALDYAAD 239


>gi|306830872|ref|ZP_07464034.1| geranyltranstransferase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426895|gb|EFM30005.1| geranyltranstransferase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 289

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 126/237 (53%), Gaps = 17/237 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           +    I+  +     Q+        +  L+ AI Y++  GGK+IR  +  E    F +  
Sbjct: 2   DKLNEINQAIRRYYAQSD-----VVSPELIEAILYSVEAGGKRIRPLIFLEILEGFGIEL 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++DE TAI+AG+ L    F
Sbjct: 57  TEGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPF 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
            ++++    L  + + +L+  L+   G  GM+GGQMLD++ E   ++ +++ MI   KTG
Sbjct: 117 GLVANAA--LSADTKVRLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQMIHANKTG 174

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE------EDLPKK 237
            L+ F   +  I+A+ + ++ + LR  G  +G+ FQ+ DD+LD           PKK
Sbjct: 175 KLLTFPVVAAGIVANLAADDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGKTPKK 231


>gi|189346622|ref|YP_001943151.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
 gi|189340769|gb|ACD90172.1| Polyprenyl synthetase [Chlorobium limicola DSM 245]
          Length = 324

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 9/216 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L  Q    +    N  +    RY L   GK+IR  LV   A +         R    +E
Sbjct: 15  ELFQQKYKAVLHSSNTLVDKVTRYVLRQQGKQIRPALVLLSAKICGGVTEVTYRAAIMVE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +LIHDD+  +D   +RRG  +++  +    +++ G+ LL+         K     
Sbjct: 75  LLHSATLIHDDV--VDGAEMRRGLASINALWKNKISVLIGDYLLSKGLLYSLDHKDYASL 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           +  S  +  ++    L      Q+   +   I E     +   KT +L+  +C  GA  A
Sbjct: 133 HTVSDAVRRMSEGEIL------QIQKTRSLDISEEDYISVISDKTASLIASSCAMGAASA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                    ++ +GE LG+ FQ+ DDLLD   D  K
Sbjct: 187 TDDDTMIAGMKRYGEYLGLAFQIRDDLLDYTGDSKK 222


>gi|15678079|ref|NP_275193.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|3334232|sp|O26156|IDSA_METTH RecName: Full=Bifunctional short chain isoprenyl diphosphate
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyl pyrophosphate synthase; Short=FPP
           synthase; AltName: Full=Geranyltranstransferase
 gi|2621086|gb|AAB84557.1| bifunctional short chain isoprenyl diphosphate synthase
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 325

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 118/233 (50%), Gaps = 16/233 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           ++ +  ++   + D+ + ++ S +     + LL A  + +  GGKKIR  L    +    
Sbjct: 3   EVMDILRKYSEMADERIRESISDI---TPETLLRASEHLITAGGKKIRPSLALLSSEAVG 59

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A  V AAIE IH +SLIHDD+  MD+  IRRG+P VH+ + E  AI+AG+ L + 
Sbjct: 60  GDPGDAAGVAAAIELIHTFSLIHDDI--MDDDEIRRGEPAVHVLWGEPMAILAGDVLFSK 117

Query: 127 AFE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQK 182
           AFE +I +  +++     + ++ S         +  GQ LD+  E    + E +   +  
Sbjct: 118 AFEAVIRNGDSEMVKEALAVVVDSCVK------ICEGQALDMGFEERLDVTEEEYMEMIY 171

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT AL+  A ++GAIM   S  E   L  +G  +G+ FQ+ DD LD   D  
Sbjct: 172 KKTAALIAAATKAGAIMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVSDEE 224


>gi|159903572|ref|YP_001550916.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9211]
 gi|159888748|gb|ABX08962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9211]
          Length = 323

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGK+IR  +V   +   +
Sbjct: 2   ATVTELLQPVEIDLEHLLTDLRSLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLLSRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           V+        R+    E IH  SL+HDD+  +D    RRG PTVH +++   A++AG+ L
Sbjct: 62  VDGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVPTVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D     +        
Sbjct: 120 FAQASWHLANLNNLDVVKLLSRVIMDLADGEIKQGLYR------FDAGQSFSTYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  + ++  ++    + +   L  FG+ LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSSQAVGVLNDLPKEKLNSLYHFGKQLGLAFQVVDDILDFTG 222


>gi|48475134|gb|AAT44203.1| putative polyprenyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|57863832|gb|AAS16899.2| putative polyprenyl diphosphate synthase [Oryza sativa Japonica
           Group]
 gi|215694846|dbj|BAG90037.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632699|gb|EEE64831.1| hypothetical protein OsJ_19688 [Oryza sativa Japonica Group]
          Length = 403

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 17/230 (7%)

Query: 12  NSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASL 64
            S  ++ + DDLL        +    N  L+SA       GGK++R  LV       A L
Sbjct: 81  VSSLLEVVSDDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 140

Query: 65  FNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             +  LT    R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ 
Sbjct: 141 AGLLELTTEHQRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDF 198

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           +   +   +++ +      + SQ++               Q   + D  +      +   
Sbjct: 199 MFAQSSWFLANLENIEVIKLISQVIKDFASGEI------KQASTLFDCDVTLDDYLLKSY 252

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  +  S AI +  S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 253 YKTASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQ 302


>gi|253573826|ref|ZP_04851169.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251847354|gb|EES75359.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 799

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 112/240 (46%), Gaps = 9/240 (3%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
                  +Q   K +D IL   +  TAS + T+ +  L+    Y+L G GK++R  L   
Sbjct: 505 QEAFVELVQTARKHVDAILP--ITSTASSLITE-DPLLVDTANYSLEGSGKRLRPILAWV 561

Query: 61  CA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               ++ ++      +  A+E +H  SLI DDLPS DN   RRGKPT+H  ++   A + 
Sbjct: 562 MGVQVYGLDPAALSPLFRALEYMHTASLIFDDLPSQDNSPSRRGKPTLHEVHNSAIAELT 621

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G  L+  A E  +S K    +     L+  L+   G   M     L+ + + +   ++  
Sbjct: 622 GIFLIQKAVEEQASLK-GFDNESVLALLQYLSRKAGEICMGQAMDLNAKGKVLTVEELDR 680

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           I   KTG        + AI+A A++ E   L+ F  + GI FQ+ DDLLD E D   L K
Sbjct: 681 ICFYKTGIAFEACLVAPAILARANETEIAVLKNFAYHTGIAFQIKDDLLDGEGDPRLLGK 740


>gi|307543672|ref|YP_003896151.1| polyprenyl synthetase [Halomonas elongata DSM 2581]
 gi|307215696|emb|CBV40966.1| polyprenyl synthetase [Halomonas elongata DSM 2581]
          Length = 292

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 118/231 (51%), Gaps = 12/231 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNV 67
           +  + +R+D  L+ L  +  S      +++L +A+R+  L+GGK++R  L+         
Sbjct: 7   MAADRRRVDECLETLFARGESAP----SEQLDAAMRHGVLVGGKRLRPVLLYATGRALGA 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +         A+E +H YSL+HDDLP+MD+  +RRG+PTVH  YDE TAI+AG+ L T A
Sbjct: 63  SDEALDGPAMAVELVHAYSLVHDDLPAMDDDDVRRGRPTVHRAYDEATAILAGDALQTLA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
           FE+++           + ++ +L    G  GM  GQ   LD      D T +  + + KT
Sbjct: 123 FEVLADTGHP----RLAAMVGTLARAAGRDGMAAGQALDLDAVGGHPDLTALATMHRHKT 178

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A   G ++A          L  +   +G+ FQ+ DD+LD   D  
Sbjct: 179 GALIHAAVRLGGLVAVPEDDERLLALERYAAAIGLAFQIRDDVLDVTGDTA 229


>gi|311897904|dbj|BAJ30312.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 337

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 22/233 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   +Q   + ++  L + + ++     T     L+ A      GGK+ R  LV   A 
Sbjct: 15  DLTRDVQAGMEAVEAALIEAV-KSDVPFITVTASHLIEA------GGKRFRPLLVMLAAQ 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +      +     +E  H  +L HDD+  MD   +RRG P+ + ++D   AI+ G+ L
Sbjct: 68  FGDPTAPGVVPSAVVVELTHLATLYHDDV--MDEAPVRRGAPSANSRWDNSVAILTGDFL 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMI 180
            + A +++S   T+               +   + ++ GQ+L+    + E         +
Sbjct: 126 FSRASQVLSDLGTEAV----------RIQSDAFERLVTGQILETAGPRPEDDPLRHYLDV 175

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTG+L+  AC  G++MA A +   + L  +GE +G  FQLADD+LD   D
Sbjct: 176 ISGKTGSLIAVACRFGSLMAGAERWIVDLLTQYGERIGTAFQLADDVLDIASD 228


>gi|146339069|ref|YP_001204117.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278]
 gi|146191875|emb|CAL75880.1| octaprenyl diphosphate synthase [Bradyrhizobium sp. ORS278]
          Length = 336

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L        +++ AA+E +H  +L+HDD+  +D   +RRGK +  
Sbjct: 55  GGKRLRPMLTLAMAHLTEYAGDGHVKLAAAVEFMHTATLLHDDV--VDESEMRRGKLSAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS       +G +  Q+   +
Sbjct: 113 MLWGNEASVLVGDFLLGQAFRMMVEVGS-----LRALDILSAAAATIAEGEVM-QLAAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT  L   ACE G ++A   + E+   R FG NLGI FQL DD+L
Sbjct: 167 NTATTEDEYLAVIRGKTAELFAAACEVGPVLADRPKAEQTASRSFGMNLGIAFQLVDDVL 226

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 227 DYGGKAAK 234


>gi|289550751|ref|YP_003471655.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           lugdunensis HKU09-01]
 gi|289180283|gb|ADC87528.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           lugdunensis HKU09-01]
          Length = 318

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF-NVNHLT 71
           K+++ +L+ ++          ++  L  A  + L  GGK++R   V   +    +     
Sbjct: 11  KKVNNLLEQII--------KSNDTVLEEASLHLLSSGGKRVRPAFVILSSQFGKSKQSED 62

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRG+ T+  ++D+ TAI+ GN LL    E +
Sbjct: 63  TYKVAVALELIHMATLVHDDV--IDKSDKRRGRLTISKKWDQTTAILTGNFLLALGLEQL 120

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S       ++ R   ++S +     +G L  Q  D  +     +        KT  L+  
Sbjct: 121 SE-----VNHPRIHTIISTSIVDVCRGELF-QFQDQFNSNQTISNYLRRINRKTALLIQL 174

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A E GA+ ++ASQ    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 175 ATEVGALTSNASQQTVYKLKMIGHYIGMSFQIIDDILDFTSSENK 219


>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
          Length = 215

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/161 (37%), Positives = 92/161 (57%), Gaps = 6/161 (3%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDDLP MDN  +RRGKPT H  + E  A++AG+ LL +AFE ++     +   
Sbjct: 1   IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAA 60

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198
              + +  L  +IG +G++ GQ++DI  E    +   Q+  I   KTGAL+  +   GAI
Sbjct: 61  KIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLGAI 120

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           +   +  E E+LR F   +G++FQ+  D+LD     ++L K
Sbjct: 121 LGGGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELGK 161


>gi|228990628|ref|ZP_04150593.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           pseudomycoides DSM 12442]
 gi|228996726|ref|ZP_04156363.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
           Rock3-17]
 gi|228763045|gb|EEM11955.1| Heptaprenyl diphosphate synthase component 2 [Bacillus mycoides
           Rock3-17]
 gi|228769154|gb|EEM17752.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           pseudomycoides DSM 12442]
          Length = 320

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 15/230 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S L+ +   I+  L  ++      ++        +A++    GGK+IR   V       +
Sbjct: 8   SFLRSDIDVIEKELKKVVASEQQLIED-------AALQLIEAGGKRIRPVFVLLAGKFGD 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   V  A+E IH  SL+HDD+  +D   +RR   TV+ ++ +  A+  G+ L   
Sbjct: 61  YKLDAIKHVAVALELIHMASLVHDDV--IDAALLRRSSATVNAKWGDRIAMYTGDYLFAK 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           + E I++ +        S  +L +            Q+ D  D   +        K KT 
Sbjct: 119 SLECITNLEVPEAHQALSYTILEVCKGEI------EQIKDKYDYNQNLRTYLRRIKRKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L+  +C+ GAI + AS++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 173 LLIAASCQLGAIASGASRDTVNRLFWYGYFVGMSYQIIDDILDFVSTEEK 222


>gi|125583193|gb|EAZ24124.1| hypothetical protein OsJ_07863 [Oryza sativa Japonica Group]
          Length = 342

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 11/221 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  +  +R+ SA+RYA+L G       K+    L      L      
Sbjct: 48  SLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAACELLGAPRE 107

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +    A++ +    L+++DLP  + G  RRG P+    Y    A++AG+ L   A+  
Sbjct: 108 APVPAALALQMVQAGWLVNEDLPWFEAGPKRRGGPSNQAAYGTDMAVLAGDALFPLAYTH 167

Query: 131 ISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTG 186
           + +       +   +  +++  L   +G  GM  GQ LD+     + E +V  +   K G
Sbjct: 168 VIAQNPSPEPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEVMKVLTKKFG 227

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   +   GA++  A  +E+  LR +G  +G+++QL DD+
Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDI 268


>gi|56751750|ref|YP_172451.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301]
 gi|56686709|dbj|BAD79931.1| solanesyl diphosphate synthase [Synechococcus elongatus PCC 6301]
          Length = 323

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL---FNVNHLT 71
           ++  L  LL  T   +    +  L +A  +    GGK++R  +V   +            
Sbjct: 11  VEADL-QLLTDTLKQLIGARHPILYAAADHLFGAGGKRLRPAVVLLLSRATMPGQEITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  +    A++AG+ L   A   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESSLRRGIPTVHSSFSNRVAVLAGDFLFAQASWHL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +   +     + SQ+++ L     LQG+      +  D  +           KT +L+  
Sbjct: 128 AHLDSLTVVKLLSQVIMDLAEGEILQGL------NRFDSSLSIEVYLDKSYYKTASLLAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  + ++++ +S+   + L  +G +LG+ FQ+ DD+LD   
Sbjct: 182 SARAASVLSGSSETVCDALYDYGRSLGLAFQIVDDILDFTG 222


>gi|13475328|ref|NP_106892.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
 gi|14026080|dbj|BAB52678.1| geranyltranstransferase [Mesorhizobium loti MAFF303099]
          Length = 321

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 127/243 (52%), Gaps = 16/243 (6%)

Query: 2   NGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
           +G LPS+  +Q+  +R++  L  LL       +      L++A+RYA L GGK+ R+ L 
Sbjct: 17  SGRLPSEIWMQDGVRRVEQALARLLC-----AEDDGETELMAAMRYATLHGGKRTRALLC 71

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               +L +        VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+
Sbjct: 72  LATGALADTPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAIL 131

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQ 176
            G+ L  +AF  ++S      +  R  L+  L   +  +G  GGQ +D+    + ++  +
Sbjct: 132 VGDALQAHAFLTLASLDAPSDN--RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDR 189

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADDLLDCEE 232
           +  + +MK+GAL+  +   GA+ A A           L  +    G+  Q+ DD+LD   
Sbjct: 190 IVAMHRMKSGALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATA 249

Query: 233 DLP 235
           D  
Sbjct: 250 DTA 252


>gi|228914189|ref|ZP_04077805.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228845393|gb|EEM90428.1| Heptaprenyl diphosphate synthase component 2 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 305

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 11/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++  L +T +  Q    +   +A++    GGK+IR   V       +        V  A
Sbjct: 1   MIEKELKKTVASEQPLVEE---AALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVA 57

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+  G+ L   + E I++ +   
Sbjct: 58  LELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPE 115

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                S  +L +            Q+ D  +   +        K KT  L+  +C+ GAI
Sbjct: 116 AHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAI 169

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A A+ +   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 170 AAGANCDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 207


>gi|319425378|gb|ADV53452.1| Polyprenyl synthetase [Shewanella putrefaciens 200]
          Length = 331

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A   +      L++ A IE IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRLRPLLSVLAARTVSYEGDAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +F++++       DN+R   +L+ T N+  +G +  Q+++  
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTEL-----DNMRVLRVLADTTNVLAEGEVL-QLMNCN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A    A++A A+   +  L  +G+ LG  FQL DDLL
Sbjct: 163 DPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGATPEHETALGNYGKYLGTAFQLTDDLL 222

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 223 DYTADTE 229


>gi|313672526|ref|YP_004050637.1| polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939282|gb|ADR18474.1| Polyprenyl synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 323

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 105/239 (43%), Gaps = 20/239 (8%)

Query: 1   MN-GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFL 57
           MN   + + +++    ++  L   L           +  +++ + Y +   GGK++R   
Sbjct: 1   MNISDITALVKDKLALLEEELKKNL---------DSDVEMVNEVAYYVFESGGKRLRPIF 51

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           +   + L        + +   +E IH  +L+HDD+  +D    RRG+P+ +  +     +
Sbjct: 52  MFLSSGLGGYTGNRDVILSGVVEYIHTATLLHDDV--IDGAKFRRGRPSANQAFGNDITV 109

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L + AF  +         + + Q++L+       +G +  Q++   +  +   + 
Sbjct: 110 LCGDFLYSRAFVNLVKDG-----DPKVQMILANAAKTMSEGEVF-QLVKTANFNLSFEEY 163

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             I   KT  L    CE GA++A       + +  FG+ +G+ FQ++DD+LD   D  K
Sbjct: 164 NKIIFSKTAVLFSACCEIGAMLAGFDGERVKMMAEFGKIVGLSFQMSDDILDYLGDPAK 222


>gi|89099928|ref|ZP_01172799.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. NRRL B-14911]
 gi|89085320|gb|EAR64450.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
           sp. NRRL B-14911]
          Length = 788

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 24/246 (9%)

Query: 2   NGGLPSKLQENSKRIDTIL----DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSF 56
                 K++E  KRI+ +L     DLL+           + +  A  Y+L  GGK++R  
Sbjct: 497 QEDFRYKVEEVQKRINNVLRIEDKDLLM----------GEPVREAANYSLAAGGKRLRPV 546

Query: 57  LVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           +        + +     + +  ++E +H  SLI DDLP+ DN   RRGK  VH  Y    
Sbjct: 547 IAWFVGVEAYGMEETALMPLLRSLEYMHTASLIFDDLPAQDNAPSRRGKAAVHEVYGTAA 606

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--ID 173
           A ++G  L   A E  +S  +   D +  +L+     +     M  GQ +D++ +   + 
Sbjct: 607 AELSGLYLTQKAMEDQASLTSSTPDAVL-ELIRYTARSTA--EMCRGQAMDLEAKGKALT 663

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             ++  +   KTG     +    AI+A A Q+E + L+ F  + GI FQ+ DDLLD E D
Sbjct: 664 AGELDALCFYKTGIAFEASIIMPAILAGAEQDEIDVLKKFARHAGIAFQIRDDLLDVEGD 723

Query: 234 ---LPK 236
              L K
Sbjct: 724 PMLLGK 729


>gi|126642791|ref|YP_001085775.1| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
          Length = 259

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 7/193 (3%)

Query: 47  LLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           +LGGK++R  L    ASL  N N   A R   A+E IHCYSL HDDLP MDN  +RRG+P
Sbjct: 1   MLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQP 60

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGG 162
           T H+ + E TA++AG+ L + AFE++ S    +      + ++L            M+ G
Sbjct: 61  TCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCG 120

Query: 163 QMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERLRCFGENLGI 219
           Q+LD+Q E   I + ++  I + KTGAL+  A   GA+ +   +     +LR +G+ +G+
Sbjct: 121 QVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGL 180

Query: 220 IFQLADDLLDCEE 232
            FQ+ DD+LD   
Sbjct: 181 AFQVQDDILDITS 193


>gi|325277088|ref|ZP_08142742.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
 gi|324097770|gb|EGB95962.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
          Length = 322

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDLRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMQILSKATRVIAEGEVL-QLSRV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A+  ++E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEEVYMEVIRGKTAMLFEASTHSAAALAEATDAQREALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEED 233
           LD + D
Sbjct: 214 LDYKGD 219


>gi|326524578|dbj|BAK00672.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 394

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 18/240 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
              LP ++   +  +D + DDLL        +    N  L+SA       GGK++R  LV
Sbjct: 63  TARLPERVS-IASLLDVVSDDLLKLNNNLKSLIGAENPVLVSAAEQIFGAGGKRLRPALV 121

Query: 59  T----ECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                  A +  ++ LT    R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y 
Sbjct: 122 FLVSRATAEVAGLSELTTEHKRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYG 179

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              A++AG+ +   +   +++ +      + SQ++               Q   + D  +
Sbjct: 180 TRIAVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEI------KQQSTLFDCDV 233

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 +    KT +L+  +  S AI +  S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 234 TLDDYLLKSYYKTASLLASSTRSAAIFSGVSTTVCEQMYEYGRNLGLSFQVVDDILDFTQ 293


>gi|166362742|ref|YP_001655015.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843]
 gi|166085115|dbj|BAF99822.1| solanesyl diphosphate synthase [Microcystis aeruginosa NIES-843]
          Length = 323

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           +D  L  LL     ++    +  L +A  +    GGK++R  +V   +    ++      
Sbjct: 11  VDDDL-RLLTNNLKNLVGARHPILAAAAEHLFEAGGKRVRPAIVLLVSRATMLDRDITPR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDEAELRRRVPTVNSLFDNRVAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S+++               Q ++  D  I           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEI------QQGINRFDTSISLAAYLEKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  S      L  +G +LG+ FQ+ DD+LD   
Sbjct: 182 SAKAAGVLSEQSAEVNHHLYNYGRDLGLAFQIVDDILDFTS 222


>gi|332286668|ref|YP_004418579.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7]
 gi|330430621|gb|AEC21955.1| octaprenyl-diphosphate synthase [Pusillimonas sp. T7-7]
          Length = 308

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 17/220 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K +D ++   L      ++T  +        Y +  GGK++R  ++   A+         
Sbjct: 2   KAVDAVIRARLNSDVVLIRTIGD--------YIVGAGGKRMRPAMLLMMANALGYQGGNH 53

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +FE++ 
Sbjct: 54  HLLAAVVEFIHTATLLHDDV--VDESDLRRGRSTANAVFGNAASVLVGDYLYSRSFEMMV 111

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
              +     + +  +LS    +  +G +  Q+L++ D  +   +   + + KT  L   A
Sbjct: 112 QSGS-----MPAMSVLSAATTVIAEGEVL-QLLNVHDPDVSLDRYLQVVRYKTAKLFEAA 165

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + GAI+  A+  ++     +G ++G  FQL DD+LD   
Sbjct: 166 TQVGAIIGGATTEQEAAAAAYGRHIGTAFQLIDDVLDYSG 205


>gi|301154821|emb|CBW14284.1| octaprenyl diphosphate synthase [Haemophilus parainfluenzae T3T1]
          Length = 331

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A                +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRIRPLIAVLAARALGYESDKVATCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++  ++     +    +++   N+  +G +  Q++++ 
Sbjct: 109 SAFGNAASVLVGDFIYTRAFQLVAQLQS-----LDILRIMADATNVLAEGEV-QQLMNVN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +S AI+A A ++ +   + +G  LG  FQL DD+L
Sbjct: 163 DPDTTEESYMRVIYSKTARLFEVAAQSVAIVAGAEKSIETAFQEYGRYLGTAFQLVDDVL 222

Query: 229 DCEE 232
           D   
Sbjct: 223 DYSA 226


>gi|217977299|ref|YP_002361446.1| Polyprenyl synthetase [Methylocella silvestris BL2]
 gi|217502675|gb|ACK50084.1| Polyprenyl synthetase [Methylocella silvestris BL2]
          Length = 337

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 19/234 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTAS--HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           L + +  + +R++  +   L +TAS   M  +  + L+S+      GGK++R  L    A
Sbjct: 19  LVALVSADMERVNQTI---LSRTASDVSMIPEVANHLISS------GGKRLRPMLTLATA 69

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L N      +++ A++E +H  +L+HDD+  +D   +RRGK    + +    +++ G+ 
Sbjct: 70  GLCNYRGAGHVKLAASVEFMHTATLLHDDV--VDESDMRRGKLAARMLWGNEASVLVGDF 127

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL  AF+++    +     +    +LS    +  +G +  Q+   +D    E     + +
Sbjct: 128 LLGQAFKMMVEVGS-----LPCLDVLSAAAAVIAEGEVM-QLSAAKDTETSEDDYLAVIR 181

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KT AL   A E G ++A   + E    R +G NLG+ FQL DD LD      K
Sbjct: 182 AKTAALFGAAAEVGPLLAGRPKAEIAACRGYGLNLGVAFQLIDDALDYGGASAK 235


>gi|120612320|ref|YP_971998.1| trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1]
 gi|120590784|gb|ABM34224.1| Trans-hexaprenyltranstransferase [Acidovorax citrulli AAC00-1]
          Length = 344

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 9/197 (4%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
             +    RY +  GGK++R  L+   +            + A IE IH  +L+HDD+  +
Sbjct: 52  PLIGEIARYIISAGGKRLRPALLLLMSGALGYQEAQRFNLAAVIEFIHTATLLHDDV--V 109

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRG+PT +  +    +++ G+ L + AF+++        D++R   +LS   NI 
Sbjct: 110 DESTMRRGRPTANENFGNPASVLVGDFLHSRAFQMMVDA-----DDMRVMQILSEATNII 164

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            +G +  Q+++  D  +DE     + + KT  L   +    A++A A    +E    +G+
Sbjct: 165 AEGEV-QQLMNTHDATLDEQGYLEVIRSKTAKLFEASARLAAVLARAPAAIEEACAEYGK 223

Query: 216 NLGIIFQLADDLLDCEE 232
            LG  FQ+ DD+LD + 
Sbjct: 224 ALGTAFQVIDDVLDYDG 240


>gi|153837920|ref|ZP_01990587.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810]
 gi|149748698|gb|EDM59549.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus AQ3810]
          Length = 277

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 8/181 (4%)

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R  L    A              A IE IH  +L+HDD+  +D   +RRGK T +  + 
Sbjct: 1   LRPLLAILSARALGYQGTGHTMAAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFG 58

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  D   
Sbjct: 59  NAASVLVGDFIYTRSFQMMTELGS-----MKILQLMSNAVNVIAEGEV-QQLMNCNDPDT 112

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E     +   KT  L   A + GAI+  A ++ +  L+ +G+ LG  FQL DD++D   
Sbjct: 113 TEESYMQVIYSKTARLFESATQIGAILNDAPEHVELALQNYGKYLGTAFQLIDDVMDYTS 172

Query: 233 D 233
           D
Sbjct: 173 D 173


>gi|307706648|ref|ZP_07643455.1| geranyltranstransferase [Streptococcus mitis SK321]
 gi|307618103|gb|EFN97263.1| geranyltranstransferase [Streptococcus mitis SK321]
          Length = 291

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E      V 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQHLALEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEMQAKLKTVGELIGLAFQVRDDVLDVTA 222


>gi|289167859|ref|YP_003446128.1| farnesyl diphosphate synthase [Streptococcus mitis B6]
 gi|288907426|emb|CBJ22263.1| farnesyl diphosphate synthase [Streptococcus mitis B6]
          Length = 291

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L+D       +   Q    L  ++ Y++  GGK+IR FL+ E     ++ 
Sbjct: 4   QEKLALVESALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLEVLEALHIA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E   +   ++  I   KT
Sbjct: 118 YVLIAQA--DLPSQIKVDLISNLSLASGSLGMVAGQVLDMEGEHQHLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEMQVKLKIVGELIGLAFQVRDDVLDVTA 222


>gi|312131592|ref|YP_003998932.1| polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908138|gb|ADQ18579.1| Polyprenyl synthetase [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 11/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +P+ +      I   +     +    M+T H   L   ++Y +   GK+IR   V   A 
Sbjct: 1   MPTTIDSIQAPIVEEMKSFEKKFRKSMKT-HVMLLDQIMKYIIHRKGKQIRPMFVFLTAG 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                  +  R  A IE +H  +L+HDD+  +D    RRG  +V+  +    A++ G+ L
Sbjct: 60  ALGGIKESTYRGAALIELLHTATLVHDDV--VDEANYRRGFFSVNALWKNKIAVLVGDYL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L     +     +   ++     ++S       +G L  Q+   +   I E   + + + 
Sbjct: 118 LAKGLLL-----SVENEDFNLLKIVSTAVREMSEGELL-QIEKARKLDITEEVYYEVIRQ 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
           KT  L+   C  GA  A  +  E E+ R  GE +G+ FQ+ DDL D   +++ K
Sbjct: 172 KTATLIAACCAVGAASADRTPEEVEKARLLGEKIGMAFQIKDDLFDFGTDEIGK 225


>gi|306833003|ref|ZP_07466135.1| geranyltranstransferase [Streptococcus bovis ATCC 700338]
 gi|304424902|gb|EFM28036.1| geranyltranstransferase [Streptococcus bovis ATCC 700338]
          Length = 289

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 80/237 (33%), Positives = 127/237 (53%), Gaps = 17/237 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           +    I+  +     Q+        +  L+ AI Y++  GGK+IR  +  E    F +  
Sbjct: 2   DKLNEINQAIRRYYAQSD-----VVSPDLIEAILYSVEAGGKRIRPLIFLEILEGFGIEL 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++DE TAI+AG+ L    F
Sbjct: 57  TEGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFDEATAILAGDSLFLDPF 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
            +++   T L  +I+ +L+  L+   G  GM+GGQMLD++ E   ++ +++ +I   KTG
Sbjct: 117 GLVAD--TALSADIKVRLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQLIHTNKTG 174

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE------EDLPKK 237
            L+ F   +  I+A+ + N+ + LR  G  +G+ FQ+ DD+LD           PKK
Sbjct: 175 KLLTFPVVAAGIVANLAANDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGKTPKK 231


>gi|93006580|ref|YP_581017.1| trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5]
 gi|92394258|gb|ABE75533.1| Trans-hexaprenyltranstransferase [Psychrobacter cryohalolentis K5]
          Length = 344

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +   CA + N      A+ + A  E +H  +L+HDD+  +D    RRGKPT
Sbjct: 61  AGGKRMRPLITLLCARMLNDEPSKQAMHLAAITEMLHTATLVHDDV--IDESGQRRGKPT 118

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +D  TA++ G+ L+  AF ++   ++     + S     +     L      Q+  
Sbjct: 119 ANATWDNATAVLVGDYLIARAFNLLVGFQSLPLLQVFSDGTCDIAEGEVL------QLQH 172

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +    E     I   KT  L   A +  AI+   +Q   + L  FG++ G  FQ+ DD
Sbjct: 173 QHNPEATEQDYLNIIDGKTSRLFMMATQGAAILQGQTQ-HLQALANFGQHFGNAFQIVDD 231

Query: 227 LLDCEEDLP 235
           +LD   D  
Sbjct: 232 VLDYSGDSA 240


>gi|148242258|ref|YP_001227415.1| prenyl transferase [Synechococcus sp. RCC307]
 gi|147850568|emb|CAK28062.1| Prenyl transferase [Synechococcus sp. RCC307]
          Length = 323

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S + +  + +++ L+ LL    + +   H     +A      GGK++R  +V   +   +
Sbjct: 2   STVAQLLQPVESDLEQLLSDLRALIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALD 61

Query: 67  VNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                +LR   +    E IH  SL+HDD+  +D    RRG PTVH +++   A++AG+ L
Sbjct: 62  PAGELSLRHRRLAQITEMIHTASLVHDDV--VDEANTRRGVPTVHSRFNSRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQSSWHLANLDDLEVVKLLSRVIMDLAEGEIRQGLFR------YDTGQSLETYLEKSYW 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  + ++  +++   +++  +L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSAKAAGVLSELERDQLNQLHSFGRQLGLAFQIVDDILDFTG 222


>gi|15835530|ref|NP_297289.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum Nigg]
 gi|270285718|ref|ZP_06195112.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum Nigg]
 gi|270289727|ref|ZP_06196029.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum Weiss]
 gi|301337112|ref|ZP_07225314.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum MopnTet14]
 gi|7190945|gb|AAF39709.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydia
           muridarum Nigg]
          Length = 292

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 77/232 (33%), Positives = 109/232 (46%), Gaps = 16/232 (6%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHL 70
              +I+  L D L              L + I YALLGG K++R  LV   A        
Sbjct: 7   YRSKIEKRLRDSLEDFGK-----TQSGLRNPIEYALLGGGKRVRPLLVCLFADSI-QKRR 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L    A+E IH  +LI DDLP MDN  +RRGKP+VH  +DE +A++A   L+  A+  
Sbjct: 61  DVLDTAIAVEYIHTSTLIADDLPCMDNDDMRRGKPSVHKAFDEASALLASYALIPAAYAR 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHN---------IGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
           I      LK+ +  Q  +   +           G++G+LGGQ  D+  +   E  V  I 
Sbjct: 121 IRKNAKALKEVVSVQREIEDAYEDVLDLIELRFGVEGVLGGQYEDVFFQSFTEESVINII 180

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             KT AL   AC SG +    ++ +   +  F  N GI+FQ+ DDL D  +D
Sbjct: 181 NKKTSALFEIACVSGWLFGGGAREKTPLVIEFARNFGILFQIGDDLADLSQD 232


>gi|117927490|ref|YP_872041.1| trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B]
 gi|117647953|gb|ABK52055.1| Trans-hexaprenyltranstransferase [Acidothermus cellulolyticus 11B]
          Length = 349

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 21/235 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + GL +++++  + ++T+L   +  +     T+ +  L+ A      GGK+ R  LV   
Sbjct: 29  DAGLRTRVRDGLEAVETLLRQAVRSSGYPFLTETSRHLVEA------GGKRFRPLLVLLA 82

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +   A +E  H  +L HDD+  MD   +RRG  + + ++    AI+ G+
Sbjct: 83  AEYGDPTAPGVVPAAAVVELTHLATLYHDDV--MDEAVVRRGTASANARWSNTIAILTGD 140

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDE-TQVF 178
            L + A ++++    +                   + ++ GQ+ +    +E +D      
Sbjct: 141 FLFSRASDLLADLGPEAV----------RIQARTFERLVQGQIRETLGPEEGVDPVEHYL 190

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  A   GA+ + A     + +  +GE +G  FQL+DDLLD   D
Sbjct: 191 RVVADKTGSLIATAARFGAMFSGAPAWIVDVMVTYGERIGTAFQLSDDLLDVMSD 245


>gi|94501366|ref|ZP_01307886.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65]
 gi|94426479|gb|EAT11467.1| Trans-hexaprenyltranstransferase [Oceanobacter sp. RED65]
          Length = 322

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A     N      + + IE +H  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRMRPLLVLLAAKALESNEQNHPLLASIIEFLHTATLLHDDV--VDTSDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AFE++    +     +    +LS    +  +G +  Q+++++
Sbjct: 101 AAFGNAPSVLVGDFLYSRAFEMMVQLGS-----MEVMAILSNATCVIAEGEVM-QLMNVK 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  + E +   + + KT  L   +  SGA +A+AS  + E LR FG +LG+ FQL DD+L
Sbjct: 155 NPNVGEDKYMDVIQGKTAMLFEASSHSGAKLANASPEQAEALRLFGHHLGMAFQLVDDVL 214

Query: 229 DCEE---DLPK 236
           D      +L K
Sbjct: 215 DYIGNADELGK 225


>gi|90416595|ref|ZP_01224526.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium
           HTCC2207]
 gi|90331794|gb|EAS47022.1| Geranylgeranyl pyrophosphate synthase [marine gamma proteobacterium
           HTCC2207]
          Length = 331

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 21/213 (9%)

Query: 34  QHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           Q N  L+  I + ++G  GK++R  +V   A          L + A IE IH  +L+HDD
Sbjct: 24  QSNVGLVENIGHYIVGSGGKRLRPVVVLLSALASGYQGKQHLTMAAVIEFIHTATLLHDD 83

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +D   +RRG+ T + Q+    +++ G+ + + AF+++         ++    +++  
Sbjct: 84  V--VDVSALRRGRETANNQWGNAPSVLVGDFIYSRAFQMLVDVG-----DMPIMGVIADA 136

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE----- 206
            N+  +G +  QM +  +  IDE   + +   KT  L   A   GA++A    +      
Sbjct: 137 TNLISEGEV-QQMGNAGNSAIDEATYYEVIYRKTAKLFEAAARIGAMLAAEEADLFVGDS 195

Query: 207 ------KERLRCFGENLGIIFQLADDLLDCEED 233
                  + +  +G++LG+ FQ+ADD++D + D
Sbjct: 196 AILDARTDAMAAYGKHLGLAFQIADDVMDYQGD 228


>gi|154248054|ref|YP_001419012.1| polyprenyl synthetase [Xanthobacter autotrophicus Py2]
 gi|154162139|gb|ABS69355.1| Polyprenyl synthetase [Xanthobacter autotrophicus Py2]
          Length = 310

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 73/230 (31%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           ID  L  L+   ASH        L +A+R+ LL  GK++R  L    A   N +    L 
Sbjct: 26  IDRRLGLLVPPAASHPAV-----LHAAMRHILLSPGKRLRPLLTLAAAIQLNASEHAVLD 80

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            G A+E IH  SLI DDLP MD+  +RR +PT H+QY E  A++A  GLL+ AF  +++ 
Sbjct: 81  FGCALEMIHASSLIVDDLPCMDDAAMRRAQPTTHVQYGEDVAVLASIGLLSRAFG-VAAA 139

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFAC 193
              + +  R + +  L+  +G  G+ GGQ  D++       +    + + KTG L   A 
Sbjct: 140 APGVSERARLEAVAILSMAVGSLGLCGGQYDDLRPSPGRSLSATEDVNRRKTGVLFSAAV 199

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-------DLPK 236
           E    +A A + +   L+    ++G  +Q+ DD+LD          D+ K
Sbjct: 200 EIAGHVAAADETQMGHLKALAGHVGRAYQILDDILDASASSASLGKDVGK 249


>gi|77461082|ref|YP_350589.1| polyprenyl synthetase [Pseudomonas fluorescens Pf0-1]
 gi|77385085|gb|ABA76598.1| octaprenyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
          Length = 322

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDMRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  +
Sbjct: 100 NAMWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMKILSQATRIIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A+  + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALAGATAEQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD + D  
Sbjct: 214 LDYKGDAE 221


>gi|327461660|gb|EGF07991.1| geranyltranstransferase [Streptococcus sanguinis SK1]
 gi|327489513|gb|EGF21306.1| geranyltranstransferase [Streptococcus sanguinis SK1058]
          Length = 291

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V +A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|239996638|ref|ZP_04717162.1| geranyltranstransferase [Alteromonas macleodii ATCC 27126]
          Length = 296

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 10/232 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           Q+  ++ D  L  L+ +        +  RL  A+R+ALL GGK++R  LV    +  +V 
Sbjct: 8   QQVKQQTDASLLTLIDEL-----PDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVP 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +  AIEC+H YSL+HDDLP+MD+  +RRG PT HI +DE TAI+AG+ L   AF
Sbjct: 63  KKDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAF 122

Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
            +++  P +   +  RSQL+  L  + G  GM GGQ +D+    + I   ++  + ++KT
Sbjct: 123 TVLADAPLSTYAETKRSQLLSVLAKSAGYIGMCGGQAIDLASTGKTISLEELKQLHRLKT 182

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GAL+    E  AI++       K  L  +  ++G+ FQ+ DD+LD E    K
Sbjct: 183 GALLKACVEMVAIVSEGLLPQTKIDLMAYAADIGLAFQVQDDILDVEGSSEK 234


>gi|90994460|ref|YP_536950.1| prenyl transferase [Porphyra yezoensis]
 gi|122194707|sp|Q1XDL8|PREA_PORYE RecName: Full=Prenyl transferase
 gi|90819024|dbj|BAE92393.1| prenyl transferase [Porphyra yezoensis]
          Length = 323

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  L     +   T+H   L +A ++    GGK++R  LV   A   +        
Sbjct: 11  VEQELCSLEKNLKAVAGTRHP-ILYAAAKHLFDAGGKRVRPALVFLVAKATSEKQDINTG 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D    RRG  TVH  ++   A++AG+ L   +   +
Sbjct: 70  QKRLAEITEIIHTASLVHDDI--IDECTTRRGVKTVHNLFNTKIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++ +        S+++         QG++        D  I           KT +L+  
Sbjct: 128 ANIENLAVVKAISKVITDFAEGEIRQGLV------HFDPSISIDAYIEKSFYKTASLIAA 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +C   A++  ++      L  +G+++G+ FQ+ DD+LD   
Sbjct: 182 SCRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITG 222


>gi|78187081|ref|YP_375124.1| trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273]
 gi|78166983|gb|ABB24081.1| Trans-hexaprenyltranstransferase [Chlorobium luteolum DSM 273]
          Length = 324

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 9/216 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++  +    +    N  +    RY L   GK+IR  +V   A++         R    +E
Sbjct: 15  EIFRKKYRELLHAQNTLVDKVTRYVLRQQGKQIRPAMVLLSAAVSGGVTDATYRAAIMVE 74

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +LIHDD+  +D   +RRG P+++  +    +++ G+ LL+               
Sbjct: 75  LLHSATLIHDDV--VDGAEMRRGLPSINAIWKNKISVLIGDYLLSRGLLYSLDSGDYGFL 132

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           +  S  +  ++    L      Q+   +   I E     +   KT +L+  +C  GA+ A
Sbjct: 133 HQVSDAVRRMSEGEIL------QIQKTRSLDITEEDYLSVISDKTASLIASSCAMGALSA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + +     ++ +GE+LG+ FQ+ DDLLD   D  K
Sbjct: 187 TSDEKSILAMKRYGEHLGLAFQIRDDLLDYTGDSKK 222


>gi|325577651|ref|ZP_08147926.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160396|gb|EGC72522.1| octaprenyl-diphosphate synthase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 331

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A                +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 51  GGKRIRPLIAVLAARALGYESDKVATCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T AF++++  ++     +    +++   N+  +G +  Q++++ 
Sbjct: 109 SAFGNAASVLVGDFIYTRAFQLVAQLQS-----LDILRIMADATNVLAEGEV-QQLMNVN 162

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A +S AI+A A ++ +   + +G  LG  FQL DD+L
Sbjct: 163 DPDTTEESYMRVIYSKTARLFEVAAQSVAIVAGAEKSIETAFQEYGRYLGTAFQLVDDVL 222

Query: 229 DCEE 232
           D   
Sbjct: 223 DYSA 226


>gi|215405436|ref|ZP_03417617.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis 02_1987]
 gi|289747226|ref|ZP_06506604.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289687754|gb|EFD55242.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
          Length = 359

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-----LG-------GKKIRSFLVTECASLFNVNH 69
           +L+  T   M  + +  +   + Y L      G       GK IR  LV   A     + 
Sbjct: 32  ELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADP 91

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            +A+    ++E +H +SL+HDDL  MD    RR +PTV   + +  A++AG+ +L+ A E
Sbjct: 92  HSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHE 149

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186
           ++    +                +   + ++ GQ  D   E   +    +   + + KT 
Sbjct: 150 VLLDCDSPHVGAAL------RAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTA 203

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ALM  + E GA++A A ++ +E L  +G ++G+ FQL DDLL    
Sbjct: 204 ALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWG 249


>gi|298293858|ref|YP_003695797.1| trans-hexaprenyltranstransferase [Starkeya novella DSM 506]
 gi|296930369|gb|ADH91178.1| Trans-hexaprenyltranstransferase [Starkeya novella DSM 506]
          Length = 340

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L       A+++ A++E +H  +L+HDD+  +D+  +RRGK    
Sbjct: 59  GGKRLRPMLTLATAALSGYEGDGAVKLAASVEFMHTATLLHDDV--VDDSEMRRGKLAAR 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     +R+  +LS    +  +G +  Q+   +
Sbjct: 117 MLWGNEASVLVGDFLLGQAFRMMIEVGS-----MRALDILSTAAVVIAEGEVA-QLAAAK 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE     + + KT  L   ACE G ++A   + E    R +G NLGI FQL DD L
Sbjct: 171 NIATDEDAYLAVIRGKTAELFAAACEVGPVLAGRPEAEMAAARAYGMNLGIAFQLVDDAL 230

Query: 229 DCEE---DLPK 236
           D      DL K
Sbjct: 231 DYGGSGADLGK 241


>gi|225851044|ref|YP_002731278.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]
 gi|225645501|gb|ACO03687.1| octaprenyl-diphosphate synthase [Persephonella marina EX-H1]
          Length = 320

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 22/231 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVN 68
           +E  K I+  L   +      +    N  L S       GGK++R  LV   + L    N
Sbjct: 6   REVLKEIEERLSKYMDSEVEFILKIGNYILDS-------GGKRLRPVLVLTFSKLLKGEN 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +  A+E +H  SL+HDD+  +D    RRGK   +  +   T ++ G+ +   A 
Sbjct: 59  EERDYPIAVAMEYLHTASLLHDDV--VDGAETRRGKAAANRVFGNDTTVLTGDYMYANAL 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKT 185
            + S         +   + +    +  ++ M  GQ+L+++   D  + E   F I + KT
Sbjct: 117 YLFS---------VYGDIDMIRNVSDAVKKMSEGQLLELKKIGDIDMREEDYFRILEGKT 167

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             L    C  G  +   S  +K+    +G ++GI FQL DDLLD   D  K
Sbjct: 168 AVLFGSCCYVGTALGGGSDKQKKSAYNYGLSIGIAFQLIDDLLDYIADEKK 218


>gi|146308698|ref|YP_001189163.1| polyprenyl synthetase [Pseudomonas mendocina ymp]
 gi|145576899|gb|ABP86431.1| Polyprenyl synthetase [Pseudomonas mendocina ymp]
          Length = 322

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV                + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLSGRALGYQADDLRLLAATIEFLHTATLLHDDVVDM--SDMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + Q+    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NAQWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMKILSHATRVIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A A++ ++E LR FG++LGI FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALAGANEAQREALRTFGDHLGIAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD + D  
Sbjct: 214 LDYKGDAA 221


>gi|325977772|ref|YP_004287488.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177700|emb|CBZ47744.1| putative geranyltranstransferase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 289

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 77/237 (32%), Positives = 127/237 (53%), Gaps = 17/237 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           +    I+  +     Q+ +      +  L+ AI Y++  GGK+IR  +  E    F +  
Sbjct: 2   DKLNEINQAIRRYYAQSDA-----VSPELIEAILYSVEAGGKRIRPLIFLEILEGFGIEL 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++DE TAI+AG+ L    F
Sbjct: 57  TEGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPF 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
            ++++    L  + + +L+  L+   G  GM+GGQMLD++ E   ++ +++ +I   KTG
Sbjct: 117 GLVANAA--LSADTKVRLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQLIHANKTG 174

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE------EDLPKK 237
            L+ F   +  I+A+ + ++ + LR  G  +G+ FQ+ DD+LD           PKK
Sbjct: 175 KLLTFPVVAAGIVANLAADDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGKTPKK 231


>gi|194703306|gb|ACF85737.1| unknown [Zea mays]
 gi|194703680|gb|ACF85924.1| unknown [Zea mays]
 gi|194704700|gb|ACF86434.1| unknown [Zea mays]
 gi|223946673|gb|ACN27420.1| unknown [Zea mays]
          Length = 424

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 12  NSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASL 64
            S  ++ + +DLL        +    N  L+SA       GGK++R  LV       A L
Sbjct: 102 VSSLLEVVSEDLLSLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 161

Query: 65  FNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             ++ LTA   R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ 
Sbjct: 162 AGLSELTAEHRRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDF 219

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           +   +   +++ +      + SQ++               Q   + D  I      +   
Sbjct: 220 MFAQSSWFLANLENIEVIKLISQVIKDFASGEI------KQASTLFDCDITLDDYLLKSY 273

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  + +S +I +  S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 274 YKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGLSFQVVDDILDFTQ 323


>gi|290473433|ref|YP_003466299.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004]
 gi|289172732|emb|CBJ79503.1| octaprenyl diphosphate synthase [Xenorhabdus bovienii SS-2004]
          Length = 323

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 8/177 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +        +      ++V A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRIRPMIAVLAGKALHCEKEKHIKVAALIEFIHTATLLHDDV--VDESDMRRGKATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    +++ G+ + T +F++++       D++R   ++S   N+  +G +  Q+++  
Sbjct: 101 AMYGNAASVLVGDFIYTRSFQMMTDL-----DSMRVLKLMSDATNVIAEGEVM-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D    E     +   KT  L   A  S AI++ A+  ++  LR +G  LG  FQL D
Sbjct: 155 DPDTSEDDYMRVIYSKTARLFEVAAHSAAILSGATPEQEAALRDYGRYLGTAFQLID 211


>gi|329926952|ref|ZP_08281352.1| polyprenyl synthetase [Paenibacillus sp. HGF5]
 gi|328938782|gb|EGG35158.1| polyprenyl synthetase [Paenibacillus sp. HGF5]
          Length = 809

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 7/231 (3%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA-S 63
                +  K +   ++  L    +       + L+ A  Y+L G GK++R  L    A  
Sbjct: 516 KDYFIDTFKSVRDEINQHLQIDKTPGIPPMKESLIDAANYSLEGDGKRLRPILTWVMAVK 575

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            + +     + +  ++E +H  SLI DDLPS DN   RRG+PT+H  +D  TA I G  L
Sbjct: 576 EYGLQASAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHDSATAEITGLFL 635

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           +  A E  SS +         +L+   +   G   M  GQ +D+  +   +   Q+  + 
Sbjct: 636 IQKAIEEQSSLE-GFDPKTVLKLIRYSSQRAG--DMCSGQAMDLNSKGKALSLEQLNTVC 692

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KTG     +    AI+A   + E   L+ F  + GI FQ+ DDLLD + 
Sbjct: 693 YYKTGIAFEASLVMPAILAQVKETEIAILKKFAYHAGIAFQIQDDLLDVQG 743


>gi|325268320|ref|ZP_08134953.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608]
 gi|324989462|gb|EGC21412.1| trans-hexaprenyltranstransferase [Prevotella multiformis DSM 16608]
          Length = 326

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLT 71
            + I+  L D +    +H     +  L + + +     GK++R  L+   A  F      
Sbjct: 8   KRPIEAELGDFI-DLFNHALDHEDGLLQTVLNHIRQRAGKRMRPILILLIAKNFGKVSEA 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L     +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+ +L+ A   +
Sbjct: 67  TLHAAVGLELLHTASLVHDDV--VDESAERRGQASVNADYDNKVAVLVGDYVLSTALLYV 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S   ++      + L  +L+    L      Q+ +IQ + I E   + I + KT AL   
Sbjct: 125 SHTHSEAIVRRLAGLGQTLSDGEIL------QLSNIQRKDITEEAYYRIIERKTAALFEA 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
               GA+ A AS+ E +  RCFG+NLGI+FQ+ DD+ D  
Sbjct: 179 CAAIGAVSAGASEEEVDAARCFGKNLGIVFQIRDDIFDYY 218


>gi|33151879|ref|NP_873232.1| octaprenyl pyrophosphate synthetase [Haemophilus ducreyi 35000HP]
 gi|33148100|gb|AAP95621.1| octaprenyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
          Length = 327

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 19/225 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNV 67
           Q++ + +D    ++L Q  S +       L++ + + ++  GGK+IR  +    A+    
Sbjct: 15  QQDMQAVDQ---EILAQLNSEVP------LINQLGHYIISGGGKRIRPLIAVLAANALCY 65

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L   A IE +H  +L+HDD+  +D   +RRG+ T +  +    +++ G+ + T +
Sbjct: 66  TGRKHLTCAAFIEFVHTATLLHDDV--VDESALRRGRETANAIFGNAASVLVGDFIYTRS 123

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++S      D++    ++S   N   +G +  Q+++I D    E     +   KT  
Sbjct: 124 FQMMTS-----VDSLEVLKVMSAATNALAEGEV-QQLMNINDPHTTEANYMRVIYNKTAR 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A +  AI+A ASQ  ++ L+ +G  LG  FQL DD+LD   
Sbjct: 178 LFEAATQCVAIVAGASQQIEQALKAYGCYLGTAFQLVDDILDYSA 222


>gi|325697091|gb|EGD38978.1| geranyltranstransferase [Streptococcus sanguinis SK160]
          Length = 291

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 123/233 (52%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLTEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++  A Q+ +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLTYPFVAAGLIVQAQQSVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|307704839|ref|ZP_07641733.1| farnesyl diphosphate synthase [Streptococcus mitis SK597]
 gi|307621615|gb|EFO00658.1| farnesyl diphosphate synthase [Streptococcus mitis SK597]
          Length = 291

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 12/227 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    ++  L+D       +   Q    L  ++ Y++  GGK+IR FL+        V 
Sbjct: 4   QEKLALVELALEDF------YGDQQFASSLRESVLYSIHAGGKRIRPFLLLGVLEALQVA 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  IKPAHAQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFGEAMAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           + +I+     L   I+  L+ +L+   G  GM+ GQ+LD++ E  ++   ++  I   KT
Sbjct: 118 YALIAQA--DLPSQIKVDLIANLSLASGSLGMVAGQVLDMEGEHQYLSLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+ +  ++ AI+A  +   + +L+  G  +G+ FQ+ DD+LD   
Sbjct: 176 GKLLAYPFQAAAIIAELAPEIQAKLKTVGALIGLAFQVRDDVLDVTA 222


>gi|15614216|ref|NP_242519.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Bacillus halodurans C-125]
 gi|10174270|dbj|BAB05372.1| heptaprenyl diphosphate synthase component II (spore germination
           protein C3) [Bacillus halodurans C-125]
          Length = 323

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           KL +        +  +  +    +Q +H+    +++     GGK+IR   V         
Sbjct: 2   KLADIYAHFQEDIFTIERELEEAVQARHDILRKASVHLLKAGGKRIRPVFVLLAGKFGTY 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      +   +E IH  SL+HDD+  +D+  +RRGK T+  Q+D   A+  G+ +   A
Sbjct: 62  DVNVLKHIAVPLELIHMASLVHDDV--IDDADLRRGKKTIKSQWDNRIAMYTGDYMFAKA 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            +          D+     ++S   N    G +  Q+ D  +        F   K KT  
Sbjct: 120 VQ-----TATYFDDPNIHQIISNAINEMCLGEVE-QIRDQYNPNQHLRIYFRRIKRKTAL 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  +C+ GA+ A A     ++L  FG  +G+ FQ+ DD+LD   
Sbjct: 174 LIAVSCQLGALAAKADPAIVQKLYYFGYYVGMSFQITDDVLDFVG 218


>gi|330811830|ref|YP_004356292.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379938|gb|AEA71288.1| Octaprenyl-diphosphate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 322

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDMRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++    +     +    +LS    I  +G +  Q+  +
Sbjct: 100 NAMWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMKILSQATRIIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  S A +A AS  + E LR FG++LG+ FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHSAAALAGASAEQSEALRTFGDHLGVAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD + D  
Sbjct: 214 LDYKGDAE 221


>gi|319786423|ref|YP_004145898.1| polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464935|gb|ADV26667.1| Polyprenyl synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 335

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 11/191 (5%)

Query: 48  LGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GGK++R  LV                  ++ A IE IH  +L+HDD+  +D   +RRG+
Sbjct: 52  AGGKRLRPMLVVLAGQATATSLGTTADHHQLAAIIEFIHTSTLLHDDV--VDESDLRRGR 109

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T +  +    +++ G+ L + +F+++        D +    +L+ T N   +G +  Q+
Sbjct: 110 STANAIWGNAASVLVGDFLYSRSFQLMVEL-----DRMEVMQILADTTNRIAEGEVL-QL 163

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L +++   DE     + + KT  L       GA+ + A  + ++ L  +G  LG  FQ+A
Sbjct: 164 LHVRNPDTDEAAYLRVIERKTAVLFAAGTRLGALASCADADTQQALYDYGMALGYAFQIA 223

Query: 225 DDLLDCEEDLP 235
           DD+LD   D  
Sbjct: 224 DDVLDYTADAA 234


>gi|15842992|ref|NP_338029.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31794579|ref|NP_857072.1| multifunctional dimethylallyltransferase/farnesyl diphosphate
           synthetase/ farnesyltranstransferase [Mycobacterium
           bovis AF2122/97]
 gi|57117104|ref|YP_177970.1| multifunctional dimethylallyltransferase/farnesyl diphosphate
           synthetase/ farnesyltranstransferase [Mycobacterium
           tuberculosis H37Rv]
 gi|121639323|ref|YP_979547.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663262|ref|YP_001284785.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           IdsA1 [Mycobacterium tuberculosis H37Ra]
 gi|148824606|ref|YP_001289360.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis
           F11]
 gi|167968716|ref|ZP_02550993.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis H37Ra]
 gi|215413305|ref|ZP_03421990.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215428901|ref|ZP_03426820.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis T92]
 gi|215447727|ref|ZP_03434479.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis T85]
 gi|218755177|ref|ZP_03533973.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis GM 1503]
 gi|219559472|ref|ZP_03538548.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis T17]
 gi|224991820|ref|YP_002646509.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800445|ref|YP_003033446.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 1435]
 gi|254234000|ref|ZP_04927325.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis C]
 gi|254366010|ref|ZP_04982055.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254552504|ref|ZP_05142951.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260188455|ref|ZP_05765929.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis CPHL_A]
 gi|260202524|ref|ZP_05770015.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T46]
 gi|260206765|ref|ZP_05774256.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis K85]
 gi|289444945|ref|ZP_06434689.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T46]
 gi|289449096|ref|ZP_06438840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289555674|ref|ZP_06444884.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 605]
 gi|289571635|ref|ZP_06451862.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T17]
 gi|289576131|ref|ZP_06456358.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis K85]
 gi|289752116|ref|ZP_06511494.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T92]
 gi|289759559|ref|ZP_06518937.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763581|ref|ZP_06522959.1| dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis GM
           1503]
 gi|294995828|ref|ZP_06801519.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis 210]
 gi|297636060|ref|ZP_06953840.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 4207]
 gi|297733060|ref|ZP_06962178.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN R506]
 gi|298526881|ref|ZP_07014290.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans
           ferase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777739|ref|ZP_07416076.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu001]
 gi|306782466|ref|ZP_07420803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu002]
 gi|306786286|ref|ZP_07424608.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu003]
 gi|306790656|ref|ZP_07428978.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu004]
 gi|306795183|ref|ZP_07433485.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu005]
 gi|306799374|ref|ZP_07437676.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu006]
 gi|306805221|ref|ZP_07441889.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu008]
 gi|306809406|ref|ZP_07446074.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu007]
 gi|306969512|ref|ZP_07482173.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu009]
 gi|306973857|ref|ZP_07486518.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu010]
 gi|307081569|ref|ZP_07490739.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu011]
 gi|307086177|ref|ZP_07495290.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu012]
 gi|313660391|ref|ZP_07817271.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN V2475]
 gi|61224677|sp|P0A5H8|GGPPS_MYCTU RecName: Full=Probable geranylgeranyl pyrophosphate synthase;
           Short=GGPP synthase; Short=GGPPSase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|61224678|sp|P0A5H9|GGPPS_MYCBO RecName: Full=Probable geranylgeranyl pyrophosphate synthase;
           Short=GGPP synthase; Short=GGPPSase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|13883332|gb|AAK47843.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31620176|emb|CAD95619.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE
           IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL
           DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE
           (PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) +
           GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE)
           (FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL
           DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) +
           FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE
           SYNTHASE) [Mycobacterium bovis AF2122/97]
 gi|38490369|emb|CAE55595.1| PROBABLE MULTIFUNCTIONAL GERANYLGERANYL PYROPHOSPHATE SYNTHETASE
           IDSA1 (GGPP SYNTHETASE) (GGPPSASE) (GERANYLGERANYL
           DIPHOSPHATE SYNTHASE): DIMETHYLALLYLTRANSFERASE
           (PRENYLTRANSFERASE) (GERANYL-DIPHOSPHATE SYNTHASE) +
           GERANYLTRANSTRANSFERASE (FARNESYL-DIPHOSPHATE SYNTHASE)
           (FARNESYL-PYROPHOSPHATE SYNTHETASE) (FARNESYL
           DIPHOSPHATE SYNTHETASE) (FPP SYNTHETASE) +
           FARNESYLTRANSTRANSFERASE (GERANYLGERANYL-DIPHOSPHATE
           SYNTHASE) [Mycobacterium tuberculosis H37Rv]
 gi|121494971|emb|CAL73457.1| Probable multifunctional geranylgeranyl pyrophosphate synthetase
           idsA1 [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599529|gb|EAY58633.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis C]
 gi|134151523|gb|EBA43568.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1 :
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148507414|gb|ABQ75223.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           IdsA1 [Mycobacterium tuberculosis H37Ra]
 gi|148723133|gb|ABR07758.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis
           F11]
 gi|224774935|dbj|BAH27741.1| putative multifunctional geranylgeranyl pyrophosphate synthetase
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321948|gb|ACT26551.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417864|gb|EFD15104.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T46]
 gi|289422054|gb|EFD19255.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289440306|gb|EFD22799.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 605]
 gi|289540562|gb|EFD45140.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis K85]
 gi|289545389|gb|EFD49037.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T17]
 gi|289692703|gb|EFD60132.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis T92]
 gi|289711087|gb|EFD75103.1| dimethylallyltransferase + geranyltranstransferase +
           farnesyltranstransferase [Mycobacterium tuberculosis GM
           1503]
 gi|289715123|gb|EFD79135.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298496675|gb|EFI31969.1| dimethylallyltransferase/geranyltranstransferase/farnesyltranstrans
           ferase [Mycobacterium tuberculosis 94_M4241A]
 gi|308213915|gb|EFO73314.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu001]
 gi|308324859|gb|EFP13710.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu002]
 gi|308329115|gb|EFP17966.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu003]
 gi|308332952|gb|EFP21803.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu004]
 gi|308336511|gb|EFP25362.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu005]
 gi|308340388|gb|EFP29239.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu006]
 gi|308344247|gb|EFP33098.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu007]
 gi|308348237|gb|EFP37088.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu008]
 gi|308352963|gb|EFP41814.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu009]
 gi|308356785|gb|EFP45636.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu010]
 gi|308360733|gb|EFP49584.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu011]
 gi|308364344|gb|EFP53195.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis SUMu012]
 gi|323717885|gb|EGB27074.1| multifunctional geranylgeranyl pyrophosphate synthetase id
           [Mycobacterium tuberculosis CDC1551A]
 gi|326905242|gb|EGE52175.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis W-148]
 gi|328460177|gb|AEB05600.1| multifunctional geranylgeranyl pyrophosphate synthetase idsA1
           [Mycobacterium tuberculosis KZN 4207]
          Length = 359

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-----LG-------GKKIRSFLVTECASLFNVNH 69
           +L+  T   M  + +  +   + Y L      G       GK IR  LV   A     + 
Sbjct: 32  ELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADP 91

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            +A+    ++E +H +SL+HDDL  MD    RR +PTV   + +  A++AG+ +L+ A E
Sbjct: 92  HSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHE 149

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186
           ++    +                +   + ++ GQ  D   E   +    +   + + KT 
Sbjct: 150 VLLDCDSPHVGAAL------RAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTA 203

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ALM  + E GA++A A ++ +E L  +G ++G+ FQL DDLL    
Sbjct: 204 ALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWG 249


>gi|147920348|ref|YP_685879.1| putative polyprenyl synthetase [uncultured methanogenic archaeon
           RC-I]
 gi|110621275|emb|CAJ36553.1| putative polyprenyl synthetase [uncultured methanogenic archaeon
           RC-I]
          Length = 340

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 9/191 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++RS +        +     AL   AA+E +H +SLIHDD+   D    RR +PTV 
Sbjct: 55  GGKQLRSTMCLLACEAISGKFDNALPGAAAVELVHNFSLIHDDIE--DGDETRRHRPTVW 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI  G+ +   ++  I   K + +  I+   +     N  +  +  GQ LD+ 
Sbjct: 113 KLWGVPQAINTGDAMDVVSYIAILELKVKPETMIKVLRV----FNDTIMQLCEGQYLDMD 168

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            +    +   +   +   KT AL+  +   GA+ A   Q   +  + FG  +GI FQ+ D
Sbjct: 169 FQTRKTVTVEEYIEMITGKTAALIEASTAIGAMAATDDQKVIDHFKAFGHKIGIGFQIQD 228

Query: 226 DLLDCEEDLPK 236
           DLL    D  K
Sbjct: 229 DLLGIWGDPSK 239


>gi|282880585|ref|ZP_06289292.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
 gi|281305688|gb|EFA97741.1| polyprenyl synthetase [Prevotella timonensis CRIS 5C-B1]
          Length = 325

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 5   LPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  +L + ++  +  L   D LL Q  SH++ +               GK++R  L+   
Sbjct: 11  ITQELSDFNQLFEESLSHADGLLSQALSHIRQRT--------------GKRMRPMLILLI 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A  F      A      +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+
Sbjct: 57  AKNFGGVTSIAQHAAVGLELLHTASLVHDDV--VDESGERRGQASVNATYDNKVAVLVGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            +L+ A   +S   ++      + L  +L++   L      Q+ +IQ++ I E   + + 
Sbjct: 115 YILSTALLQVSFTHSEAIIQNLANLGRTLSNGEIL------QLSNIQNQDISEEVYYQVI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
           K KT AL       GA    A+  E E  R FG+ LGIIFQ+ DD+ D  E  ++ K
Sbjct: 169 KQKTAALFESCAVIGAQAGKATPEEVEAARQFGQTLGIIFQIRDDIFDYFESKEIGK 225


>gi|269467946|gb|EEZ79681.1| geranylgeranyl pyrophosphate synthase [uncultured SUP05 cluster
           bacterium]
          Length = 288

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 16/231 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
                 +  ++RI+  LD+ L+   S         L  ++RY++L GGK+ R  L    A
Sbjct: 2   SFKISFKGYTERINKKLDECLISQGS---------LTKSMRYSVLSGGKRFRPILTYAVA 52

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           + F+ +   A     A+E IH YSLIHDDLP+MD+   R  +P  H ++ E  AI+ G+G
Sbjct: 53  NTFSTDLNRADSSACAVELIHAYSLIHDDLPAMDDDDTRHNQPACHRKFGEAQAILTGDG 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI 180
           L   AFE + +    +   +R +L+ +LTH      M  GQ +D  +  + ID   +  +
Sbjct: 113 LQALAFETLVNDHN-ISSEMRIKLLQALTHAS--FEMAEGQSIDLSVVSQVIDIKTLKNM 169

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC 230
            + KTGAL+  + + GA+++   ++ + E L  F  ++G+ +Q+ DD+LD 
Sbjct: 170 HRKKTGALLNCSIKLGALLSDQCNKKDFEILDDFSADIGLAYQIQDDVLDV 220


>gi|120610694|ref|YP_970372.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1]
 gi|120589158|gb|ABM32598.1| farnesyl-diphosphate synthase [Acidovorax citrulli AAC00-1]
          Length = 306

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 9/222 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
             L +   +  +R++  L+       + +       L  A+RYA+LG GK++R  LV   
Sbjct: 15  FDLSAWSAQALRRVEQALE-------TWVPADAPGGLGDAMRYAVLGAGKRLRPLLVLAA 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   + +   ALR   ++E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ +  A++AG+
Sbjct: 68  AEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGQAQALLAGD 127

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
            L   AFE+++           R   +L+               L      + E ++  +
Sbjct: 128 ALQALAFELLTPEDDVPEAMQARLCRLLARAAGADGMAGGQAIDLASVGVALSEDELRRM 187

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            ++KTGAL+  +   GA     +    + L  +G  LG+ FQ
Sbjct: 188 HRLKTGALLQSSVLMGAACGAVAPAAWDALSRYGAALGLAFQ 229


>gi|16329171|ref|NP_439899.1| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803]
 gi|15214189|sp|P72580|PREA_SYNY3 RecName: Full=Prenyl transferase
 gi|14595182|dbj|BAA16579.2| solanesyl diphosphate synthase [Synechocystis sp. PCC 6803]
          Length = 323

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           +D  L  LL      +    +  L +A  +    GGK++R  +V   +    ++      
Sbjct: 11  VDQDL-RLLTDNLKRLVGARHPILGAAAEHLFEAGGKRVRPAIVLLVSRATLLDQELTAR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDEADLRRNVPTVNSLFDNRVAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S+++        L      Q ++  D   D          KT +L+  
Sbjct: 128 ANLDNLEVVKLLSEVIRDFAEGEIL------QSINRFDTDTDLETYLEKSYFKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++ A ++  + L  +G++LG+ FQ+ DD+LD   
Sbjct: 182 SAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTS 222


>gi|254523411|ref|ZP_05135466.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14]
 gi|219721002|gb|EED39527.1| polyprenyl synthetase [Stenotrophomonas sp. SKA14]
          Length = 332

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV               ++ A IE IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 52  AGGKRLRPMLVMLAGHAVGHAGPDHHQLAAIIEFIHTSTLLHDDV--VDESNLRRGRSTA 109

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +F+++        + +    +L+   N   +G +  Q+L +
Sbjct: 110 NALWGNAPSVLVGDFLYSRSFQLMVEL-----ERMPVMQILADATNRIAEGEVL-QLLHV 163

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   DET    + + KT  L       GA+ +   +  ++ L  +G +LG  FQ+ADD+
Sbjct: 164 HNPDTDETAYLRVIERKTAVLFAAGTRLGALASGVDEATQQALFDYGMHLGYAFQIADDV 223

Query: 228 LDCEE 232
           LD   
Sbjct: 224 LDYSA 228


>gi|189460221|ref|ZP_03009006.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136]
 gi|189433082|gb|EDV02067.1| hypothetical protein BACCOP_00858 [Bacteroides coprocola DSM 17136]
          Length = 324

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           KL+   K I+  L +      + +++     L   + Y     GK +R  LV   A L+ 
Sbjct: 3   KLEVIKKPIEKELSEFKALFDASLKSSTP-LLDEVLGYIKQRNGKMMRPILVLLMAKLYG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             + + L    ++E +H  SL+HDD+  +D    RRG+ +V+  YD   +++ G+ +L  
Sbjct: 62  GINDSTLHAALSLELLHTASLVHDDV--VDESNKRRGQSSVNALYDNKVSVLVGDYMLAT 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +    S         + ++L   L+    +      Q+++I +    E   F + + KT 
Sbjct: 120 SLRHASYTNHIELVGLVARLGQDLSEGEII------QLVNISNRDFSEEIYFDVIRKKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
           AL   + ESGAI  +A ++E E+   FGE +GI FQ+ DD+ D    E+L K
Sbjct: 174 ALFTASAESGAISVNAPKDEVEKAVLFGEMIGIAFQIKDDIFDYFDNEELGK 225


>gi|304393689|ref|ZP_07375617.1| geranyltranstransferase [Ahrensia sp. R2A130]
 gi|303294696|gb|EFL89068.1| geranyltranstransferase [Ahrensia sp. R2A130]
          Length = 289

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 15/231 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +N+ RI+  L+  L + A+        +L +A+  A+  GG ++R  L    A     + 
Sbjct: 2   DNAARIEECLERSLSRAAN---ADCPPKLRAAVHSAVFPGGARVRPQLTLAVAEACGDHE 58

Query: 70  LTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +  +    AAIE +HC SL+HDDLP  D+  +RRGKPT+H  Y E  A++ G+ L+  AF
Sbjct: 59  IELVDGAAAAIELLHCASLVHDDLPCFDDADLRRGKPTIHSLYGEEIAVLTGDALIIEAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             + +   Q    + + +           G+  GQ      E  D   V      KTG+L
Sbjct: 119 NTLCASSAQHPSRLPALVAAVCAATGMTTGITAGQAW----ESEDVVDVERYHCAKTGSL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              A  +GA+   +        R  G  +G  +QLADDLLD    EE+  K
Sbjct: 175 FVGAVCAGALAVGSDP---LPWRSLGSRIGAAYQLADDLLDALGSEEESGK 222


>gi|88798952|ref|ZP_01114534.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297]
 gi|88778432|gb|EAR09625.1| Geranylgeranyl pyrophosphate synthase [Reinekea sp. MED297]
          Length = 322

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 15/232 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + S +  + + +++ +   L      ++      + S       GGK++R  LV     
Sbjct: 5   AVFSTVSSDFEAVNSTIHRYLASDVPMVEKVAEYIIDS-------GGKRMRPLLVLLAGQ 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L          + A IE +H  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L
Sbjct: 58  LNGQLTDRHHLLAAIIEFLHTATLLHDDV--VDKSDMRRGRATANANWGNAPSVLVGDFL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +FE++         N      LS    +  +G +  Q++++++  I E Q   + K 
Sbjct: 116 YARSFEMLVELG-----NFDVMQSLSQATRVIAEGEVM-QLMNVKNPDITEAQYMEVIKG 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT  L   + E+  +++   +     L  +G NLG+ FQL DD LD   D  
Sbjct: 170 KTAILFKASAETSGLISGYDRTSVNALADYGLNLGLAFQLIDDALDYAGDAE 221


>gi|67633340|gb|AAY78591.1| predicted geranyltranstransferase [uncultured bacterium
           MedeBAC82F10]
          Length = 299

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 8/233 (3%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
              +++ SK+ D  L   + + AS      + R+  ++ Y +  GGK+IR FL+T   SL
Sbjct: 9   EKHIKDFSKKFDQTLLSHISKQAS-----VDKRIKQSMVYFVKTGGKRIRPFLITTMGSL 63

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             +          A+EC+H +SLIHDDLP+MDN   RRGK TVH ++DE TA++AG+   
Sbjct: 64  IGIKSQILNDFALAVECVHLHSLIHDDLPAMDNDDYRRGKLTVHKKFDEATAVLAGDMFQ 123

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFMIQKM 183
             + + +   K+ L  N + + +  L+   GL+G++ GQ LD    +      +  +  +
Sbjct: 124 VLSVKTLVDSKS-LSANQKVEAIQMLSKANGLEGLIAGQSLDIYMKKKSSVKDIETMYLL 182

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KTGAL          +   +  + + L+  G+ +G IFQ+ DD+LD   D  K
Sbjct: 183 KTGALFSLCFNLLLTVKKLNAQKAKDLKIIGDTIGKIFQVTDDMLDRWGDEKK 235


>gi|304406942|ref|ZP_07388596.1| heptaprenyl diphosphate synthase component II [Paenibacillus
           curdlanolyticus YK9]
 gi|304343929|gb|EFM09769.1| heptaprenyl diphosphate synthase component II [Paenibacillus
           curdlanolyticus YK9]
          Length = 325

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 21/230 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  K++ +   I+  L+  +    + M T+ +  LL A      GGK+IR   V     
Sbjct: 5   DLFVKMKGDLNEIEAELERAITSDHTLM-TETSVHLLKA------GGKRIRPIFVLLSGK 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                      +   +E IH  SL+HDD+  +DN   RRG+ TV  ++D   A+  G+ +
Sbjct: 58  FGQYRLDVMKNIAVPLELIHMASLVHDDV--IDNAETRRGQLTVKSKWDNRIAMYTGDYI 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMI 180
              A  + +       DN R   +LS      +  M  G+M  I+D F  E    Q  + 
Sbjct: 116 HGKALTVATKL-----DNPRIHQILSKA----MVEMCIGEMEQIRDFFNTEQSVRQYLLR 166

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            + KT  L+  +C+ GA+ A   +    RL  FG N+G+ FQ+ DD+LD 
Sbjct: 167 IRRKTALLIAISCQLGALAAETDEKYANRLYRFGYNVGMAFQIRDDVLDL 216


>gi|261406506|ref|YP_003242747.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
 gi|261282969|gb|ACX64940.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
          Length = 794

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 7/231 (3%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA-S 63
                +  K +   ++  L    +       + L+ A  Y+L G GK++R  L    A  
Sbjct: 501 KDYFIDTFKSVRDEINQHLQIDKTPGIPPMKESLIDAANYSLEGDGKRLRPILTWVMAVK 560

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            + +     + +  ++E +H  SLI DDLPS DN   RRG+PT+H  +D  TA I G  L
Sbjct: 561 EYGLQATAIVPLLRSLEYMHTASLIFDDLPSQDNASTRRGRPTLHQVHDSATAEITGLFL 620

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQ 181
           +  A E  SS +         +L+   +   G   M  GQ +D+  +   +   Q+  + 
Sbjct: 621 IQKAIEEQSSLE-GFDPKTVLKLIRYSSQRAG--DMCSGQAMDLNSKGKALSLEQLNTVC 677

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KTG     +    AI+A   + E   L+ F  + GI FQ+ DDLLD + 
Sbjct: 678 YYKTGIAFEASLVMPAILAQVKETEIAILKKFAYHAGIAFQIQDDLLDVQG 728


>gi|215432365|ref|ZP_03430284.1| multi-functional geranylgeranyl pyrophosphate synthetase idsA1:
           dimethylallyltransferase + geranyltranstransferase +
           [Mycobacterium tuberculosis EAS054]
 gi|289755528|ref|ZP_06514906.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium
           tuberculosis EAS054]
 gi|289696115|gb|EFD63544.1| dimethylallyltransferase + geranyltranstransferase [Mycobacterium
           tuberculosis EAS054]
          Length = 359

 Score =  174 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-----LG-------GKKIRSFLVTECASLFNVNH 69
           +L+  T   M  + +  +   + Y L      G       GK IR  LV   A     + 
Sbjct: 32  ELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADP 91

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            +A+    ++E +H +SL+HDDL  MD    RR +PTV   + +  A++AG+ +L+ A E
Sbjct: 92  HSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHE 149

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186
           ++    +                +   + ++ GQ  D   E   +    +   + + KT 
Sbjct: 150 VLLDCDSPHVGAAL------RAISEATRELIRGQAADTAFESRTDVALDECLKMAEGKTA 203

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ALM  + E GA++A A ++ +E L  +G ++G+ FQL DDLL    
Sbjct: 204 ALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWG 249


>gi|91786742|ref|YP_547694.1| trans-hexaprenyltranstransferase [Polaromonas sp. JS666]
 gi|91695967|gb|ABE42796.1| Trans-hexaprenyltranstransferase [Polaromonas sp. JS666]
          Length = 327

 Score =  174 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 105/218 (48%), Gaps = 15/218 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
           D +++  L ++   + +Q +  +++A      GGK++R  L+                + 
Sbjct: 23  DAVIERRL-KSDVPLVSQVSQYIVAA------GGKRLRPALLLLMCGALGYRGDQRYNLA 75

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + AF+++     
Sbjct: 76  AVVEFIHTATLLHDDV--VDESTLRRGRATANEAFGNPASVLVGDFLYSRAFQMMVEAG- 132

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
               ++R    L+   N+  +G +  Q++++ D  + E     + + KT  L   +    
Sbjct: 133 ----DMRVMQTLAEATNVIAEGEVL-QLMNMHDATLSEDGYLRVIRSKTAKLFEASARLA 187

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           A++A +    ++    +G+ LG  FQ+ DD+LD + D+
Sbjct: 188 ALLAQSPPPVEQSCADYGQALGTAFQVIDDVLDYDGDV 225


>gi|89894958|ref|YP_518445.1| hypothetical protein DSY2212 [Desulfitobacterium hafniense Y51]
 gi|89334406|dbj|BAE84001.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 326

 Score =  174 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L  + A  F   +  AL    A E IH  SLIHDD+  +D+   RRG PT++
Sbjct: 47  GGKRLRPLLTLQSAQCFGPLNSAALDAAVAAELIHMASLIHDDV--IDHSDRRRGIPTIN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q     A++AG+ +   AF I+++       +     + S+            Q     
Sbjct: 105 SQRGNQVAVLAGDYVFAEAFRILANKHLLTSMSYLVDAIQSMCDGEI------QQAEQRC 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  ++ +Q F     KTG L+   C SGA  A A+Q   E L  +G NLG  +Q+ DD+L
Sbjct: 159 DLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQEAVEALGQYGMNLGYAYQIIDDIL 218

Query: 229 DCEE 232
           D   
Sbjct: 219 DFTG 222


>gi|85708529|ref|ZP_01039595.1| geranyltranstransferase [Erythrobacter sp. NAP1]
 gi|85690063|gb|EAQ30066.1| geranyltranstransferase [Erythrobacter sp. NAP1]
          Length = 304

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 95/240 (39%), Positives = 139/240 (57%), Gaps = 10/240 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           N  L   L+     ID++ D  L      +    + RL+ A+RYA + GGK++R  L+  
Sbjct: 8   NDVLGDALKRVQGEIDSVFDAFLP-----VPHDTSARLVEAMRYAAMGGGKRVRPLLLVS 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L+ V+   AL   AA+E IH YSLIHDDLP MD+  +R GKPTVH  YD+ TA++AG
Sbjct: 63  TAELYGVDRTAALCAAAAVEAIHVYSLIHDDLPCMDDDDLRHGKPTVHKVYDDATAVLAG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML----DIQDEFIDETQ 176
           + L   AFEI++  +T     +RS+L+ +L    G+ GM GGQM+    D +    D   
Sbjct: 123 DALHALAFEILADSQTSADPFVRSELIATLGKASGMGGMAGGQMMDMVADEEGVEYDLRT 182

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +Q++KTGAL+  + E GAI+   +   +  LR +  ++G+ FQ+ADDLLD E D  K
Sbjct: 183 ITRLQQLKTGALLAASVEMGAILGKVAPEGRAHLRAYSRDIGLAFQIADDLLDVEGDADK 242


>gi|238927608|ref|ZP_04659368.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531]
 gi|238884533|gb|EEQ48171.1| trans-hexaprenyltranstransferase [Selenomonas flueggei ATCC 43531]
          Length = 321

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           +QE+ +  +  L+  ++   + +           +     GGK++R  L    A    + 
Sbjct: 5   IQEDLEAFEPRLEKAIVSETALITDIG-------MHLVSSGGKRLRPALFLLAARGGASF 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+ V  A+E IH  SL+HDD+  +D    RRG  T + ++    AI++G+ +   A
Sbjct: 58  DRARAMPVAVALELIHTASLVHDDV--IDEADTRRGAETTNAKWGNQVAILSGDYIFARA 115

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++         ++   ++       +      Q   +      E   +   + KT  
Sbjct: 116 FKLVAEEGYDSSVYVKLAHLVCTLSEGEIL-----QDHTVYQIPTSEHAYYERIRKKTAD 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            +   CE G  +   S  +  ++  +G  +G+ FQ+ DDLLD     ED+ K
Sbjct: 171 FLEICCELGGFIGGMSPADTAQMAEYGHAIGMAFQITDDLLDFRRSSEDIGK 222


>gi|238855305|ref|ZP_04645623.1| polyprenyl synthetase [Lactobacillus jensenii 269-3]
 gi|260664293|ref|ZP_05865146.1| heptaprenyl diphosphate synthase component II [Lactobacillus
           jensenii SJ-7A-US]
 gi|282933031|ref|ZP_06338422.1| polyprenyl synthetase [Lactobacillus jensenii 208-1]
 gi|238832075|gb|EEQ24394.1| polyprenyl synthetase [Lactobacillus jensenii 269-3]
 gi|260562179|gb|EEX28148.1| heptaprenyl diphosphate synthase component II [Lactobacillus
           jensenii SJ-7A-US]
 gi|281302840|gb|EFA95051.1| polyprenyl synthetase [Lactobacillus jensenii 208-1]
          Length = 325

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 10/209 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           LL+   H   ++ +  L  +  A  GGK +R  LV   A      +   +++  AIE +H
Sbjct: 23  LLKQTMHAPNKNLESALKEM--ADNGGKYLRPSLVLLAAHAVGKTNKQIIQIATAIETLH 80

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             +LIHDD+  +D+   RRGKP++   + +  A+ AG+ L T  F+++          + 
Sbjct: 81  MATLIHDDV--IDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFFDLMLDVNEPEYLRLN 138

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           +Q M        L G L GQM    +            K KT  L   A E GA  A  +
Sbjct: 139 AQTMR-----QILNGEL-GQMNQRFNLEQTFDDYLADIKGKTATLFRLAAEEGAHFAGGN 192

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + + L  F E+LGI FQ+ DD+LD   
Sbjct: 193 LEQTQILANFAEDLGIAFQIIDDILDYRG 221


>gi|87124214|ref|ZP_01080063.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. RS9917]
 gi|86167786|gb|EAQ69044.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. RS9917]
          Length = 323

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S + E  + ++  L+ LL    S +   H     +A      GGK++R  +V   +   +
Sbjct: 2   STVTELLQPVEQDLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +        R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PSGDLTARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVATVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFR------YDTGQTFATYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  + ++  +++  S +  + L  +G  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSAKAAGVLSGESPDHLQALYHYGRQLGLAFQVVDDILDFTG 222


>gi|88704428|ref|ZP_01102142.1| Geranyltranstransferase [Congregibacter litoralis KT71]
 gi|88701479|gb|EAQ98584.1| Geranyltranstransferase [Congregibacter litoralis KT71]
          Length = 269

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 6/204 (2%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDD 91
           +  RL  A  Y+L + GK++R  L+   A     +   AL      AIE IH YSLIHDD
Sbjct: 2   NPTRLNDARSYSLNIPGKRLRPQLLEASARATGNDRAEALAGPSAEAIELIHTYSLIHDD 61

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PT+H+ +DE TAI+ G+GL   AFE+I++   +L    R +L+  L 
Sbjct: 62  LPAMDDDDLRRGRPTLHVAFDEATAILVGDGLQAKAFELIANDD-ELSTEQRVRLIARLA 120

Query: 152 HNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G  GM+GGQ LDI+  ++ +    +  I  +KTGAL+  A   G I+ +A+  +   
Sbjct: 121 KAAGFDGMVGGQGLDIEATNKDLSLDDLKNIHALKTGALITAALVMGGIVGNATDAQLAT 180

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L   GE +G+ FQ+ DD++D   D
Sbjct: 181 LETVGEKIGLAFQIIDDVIDVRSD 204


>gi|326505838|dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326514464|dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 342

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 11/221 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ ++  +  + M  +  + + +A+R+A+L G       K+    L      L      
Sbjct: 48  SLISEVEGELDAAMPIRPPESIHNAMRHAVLPGAGKEGAAKRAPPVLCVAACELLGAPRA 107

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL   AA+E +H  SL+HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+  
Sbjct: 108 AALPTAAALEMLHGASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTH 167

Query: 131 ISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTG 186
           + S       +   +  +++  L   +G  GM  GQ LD+     + E +V  +   K G
Sbjct: 168 VISRTPSPDPVSHAVLLRVLAELARTVGSTGMAAGQFLDLAGASALGEAEVMQVLTKKFG 227

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   +   GA++  A  +E+  LR +G  +G++++L DD+
Sbjct: 228 EMAECSAACGAMLGGAGPDEEAALRRYGRAIGVLYELVDDM 268


>gi|167586043|ref|ZP_02378431.1| Trans-hexaprenyltranstransferase [Burkholderia ubonensis Bu]
          Length = 331

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 13  AHLLAPIASDMEQVNRVIRQSLASDVV-LINQIAEYIIGA------GGKRLRPALLLFVA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 66  GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE +   + +
Sbjct: 124 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDEARYMQVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 178 YKTAKLFEASARLGAVLAGADATTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|302522954|ref|ZP_07275296.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
 gi|302431849|gb|EFL03665.1| polyprenyl diphosphate synthase [Streptomyces sp. SPB78]
          Length = 377

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +   +  T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 81  GGKAVRPALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T      R+   L+      + G       + +
Sbjct: 139 KVHGPAQAILVGDALFALANEILLELGTPEAG--RATRRLTRATRALIDGQAQDISYEHR 196

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 197 DR-VTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLL 255

Query: 229 DCEED 233
               D
Sbjct: 256 GIWGD 260


>gi|328464568|gb|EGF35937.1| polyprenyl synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 257

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 7/187 (3%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A  GGK +R  L+   A +    +   + + ++IE +H  +LIHDD  ++D+  +RRG  
Sbjct: 2   ADNGGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDD--TIDDSDLRRGNI 59

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           ++  ++ +  A+ AG+ L T  F+++    T+ +  +R+   +S      L G L GQM 
Sbjct: 60  SIQAEFGKDVAVYAGDLLFTNFFDLMLDTTTEHEYLVRNAQTMSH----ILNGEL-GQMA 114

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  +     T      K KT AL   A E GA  A  +  +   L  FGENLGI FQ+ D
Sbjct: 115 ERFNLEQTFTDYLNDIKGKTAALFRLAAEEGAHFAGGNAEQSTALANFGENLGIAFQIVD 174

Query: 226 DLLDCEE 232
           DLLD   
Sbjct: 175 DLLDYTG 181


>gi|116070412|ref|ZP_01467681.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107]
 gi|116065817|gb|EAU71574.1| Trans-hexaprenyltranstransferase [Synechococcus sp. BL107]
          Length = 323

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++T L+ LL    + +   H     +A      GGK+IR  +V   +     +
Sbjct: 4   VTELLQPVETDLETLLGDLRNLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISRALAAD 63

Query: 69  HL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH ++D   A++AG+ L  
Sbjct: 64  GELTQRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFDARVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L      QG+         D        F     KT
Sbjct: 122 QASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYR------FDTSQSFETYFEKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +  +  +++  +  + + L  FG  LG+ FQ+ DD+LD   
Sbjct: 176 ASLIANSSRAAGVLSECNPQQLDSLYQFGRQLGLAFQVVDDILDFTG 222


>gi|15964599|ref|NP_384952.1| putative octaprenyl-diphosphate synthase protein [Sinorhizobium
           meliloti 1021]
 gi|307309345|ref|ZP_07589008.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C]
 gi|307320081|ref|ZP_07599502.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83]
 gi|15073777|emb|CAC45418.1| Putative octaprenyl-diphosphate synthase [Sinorhizobium meliloti
           1021]
 gi|306894296|gb|EFN25061.1| Dimethylallyltranstransferase [Sinorhizobium meliloti AK83]
 gi|306900214|gb|EFN30832.1| Dimethylallyltranstransferase [Sinorhizobium meliloti BL225C]
          Length = 338

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASMFGYEGDGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +     I +  +LS   ++  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGS-----IDALDVLSTAASVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A  S+ ++  L+ +G NLG+ FQL DD+L
Sbjct: 169 NMETTEDDYLQVIRAKTAALFAAASEVGPIVAGGSKADRNALKSYGTNLGLAFQLVDDVL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGTSSDLGK 239


>gi|33865545|ref|NP_897104.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. WH 8102]
 gi|33632714|emb|CAE07526.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. WH 8102]
          Length = 323

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++T L+ LL    S +   H     +A      GGK++R  +V   +   + +
Sbjct: 4   VTELLQPVETDLETLLGDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLLSRALSAD 63

Query: 69  HL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH ++D   A++AG+ L  
Sbjct: 64  GQLTPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFDARVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L      QG+         D              KT
Sbjct: 122 QASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFR------FDTAQSFETYLEKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +  +  +++  S +E + L  FG  LG+ FQ+ DD+LD   
Sbjct: 176 ASLIANSARAAGVLSDCSPSELDGLYRFGRQLGLAFQVVDDILDFTG 222


>gi|318058274|ref|ZP_07976997.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
 gi|318076936|ref|ZP_07984268.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
          Length = 386

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +   +  T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 90  GGKAVRPALALISAEVTGASAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 147

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T      R+   L+      + G       + +
Sbjct: 148 KVHGPAQAILVGDALFALANEILLELGTPEAG--RATRRLTRATRALIDGQAQDISYEHR 205

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 206 DR-VTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLL 264

Query: 229 DCEED 233
               D
Sbjct: 265 GIWGD 269


>gi|219669361|ref|YP_002459796.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539621|gb|ACL21360.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 331

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/184 (33%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L  + A  F   +  AL    A E IH  SLIHDD+  +D+   RRG PT++
Sbjct: 52  GGKRLRPLLTLQSAQCFGPLNSAALDAAVAAELIHMASLIHDDV--IDHSDRRRGIPTIN 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q     A++AG+ +   AF I+++     K  + S   L         G +  Q     
Sbjct: 110 SQRGNQVAVLAGDYVFAEAFRILAN-----KHLLTSMSYLVDAIQSMCDGEV-QQAEQRC 163

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  ++ +Q F     KTG L+   C SGA  A A+Q   E L  +G NLG  +Q+ DD+L
Sbjct: 164 DLAVEPSQYFQRIAQKTGILLASCCCSGAASAGANQKAVEALGQYGMNLGYAYQIIDDIL 223

Query: 229 DCEE 232
           D   
Sbjct: 224 DFTG 227


>gi|295677741|ref|YP_003606265.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002]
 gi|295437584|gb|ADG16754.1| Trans-hexaprenyltranstransferase [Burkholderia sp. CCGE1002]
          Length = 330

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+ ++++ ++   L      +  Q ++ ++SA      GGK++R  L+   A
Sbjct: 12  ASLLAPIAEDMQQVNRVIRQRLASDVM-LINQISEYIISA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGDTTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++          +R   +LS   NI  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A + GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAAQLGAVLAGADAKTEAAAAEYGRRIGTAFQIMDDWLDYTG 226


>gi|255659210|ref|ZP_05404619.1| heptaprenyl diphosphate synthase component II [Mitsuokella
           multacida DSM 20544]
 gi|260848662|gb|EEX68669.1| heptaprenyl diphosphate synthase component II [Mitsuokella
           multacida DSM 20544]
          Length = 319

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAAI 79
           ++L Q      T  N+ +    +     GGK+IR  L    A      +    L +  A+
Sbjct: 10  EILEQGLQEAVTSTNELVTEVGMHLVTSGGKRIRPALCLLSARGGKAFDLPHVLPLAEAL 69

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D    RRG  T + +++   AI++G+ +   AF +++       
Sbjct: 70  ELIHTASLVHDDV--IDEADTRRGAATANARWNNQVAILSGDYIFARAFALLAEAGYG-- 125

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            +   + +  L  N+ +  ++    +      +     F   + KT   +   CE G ++
Sbjct: 126 -DYVLKRLAELVCNLSVGEIIQDHAIYQASRGM--ADYFERIQKKTADFLEICCELGGLV 182

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               + E  +L  +G  +G+ FQ+ DDLLD E+   K
Sbjct: 183 GGMDREEAGKLAEYGHCIGMAFQITDDLLDIEQTTEK 219


>gi|78184893|ref|YP_377328.1| trans-hexaprenyltranstransferase [Synechococcus sp. CC9902]
 gi|78169187|gb|ABB26284.1| Trans-hexaprenyltranstransferase [Synechococcus sp. CC9902]
          Length = 323

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 11/227 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E  + ++T L+ LL    + +   H     +A      GGK+IR  +V   +     +
Sbjct: 4   VTELLQPVETDLETLLGDLRNLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISRALAAD 63

Query: 69  HL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                   R+    E IH  SL+HDD+  +D    RRG  TVH ++D   A++AG+ L  
Sbjct: 64  GELTPRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFDARVAVLAGDFLFA 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   +++        + S++++ L      QG+         D        F     KT
Sbjct: 122 QASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLYR------FDTSQSFETYFEKSYCKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +  +  +++  +  E + L  FG  LG+ FQ+ DD+LD   
Sbjct: 176 ASLIANSSRAAGVLSECNPQELDSLYQFGRQLGLAFQVVDDILDFTG 222


>gi|328953238|ref|YP_004370572.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM
           11109]
 gi|328453562|gb|AEB09391.1| Trans-hexaprenyltranstransferase [Desulfobacca acetoxidans DSM
           11109]
          Length = 325

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 15/225 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +LQ +  RI+  L   L      +    +  L+S       GGK+IR  L    A +   
Sbjct: 11  RLQPDIDRINLALSGNLATHVRLISEVWDHILIS-------GGKRIRPLLFILAARMCGC 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  +GA  E +H  +L+HDD+  +D    RRG+ + +  +     I+ G+ LL+ A
Sbjct: 64  RGDHLPDIGAIFEYLHAATLLHDDV--VDAATERRGQSSANTIWGNQAVILVGDFLLSKA 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             I    +      IR   +L+ T     +G +  Q+++     + E + F +   KT  
Sbjct: 122 LSIAVETR-----QIRIIEVLAQTTTYMAEGEVL-QLVNTGRLEMTEEEYFDVITRKTAK 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           LM  AC+ GAI+       +  +  FG NLGI FQL DD+LD   
Sbjct: 176 LMSAACQIGAILGGVDGRLEAAMADFGLNLGITFQLIDDILDFTG 220


>gi|333029492|ref|ZP_08457553.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011]
 gi|332740089|gb|EGJ70571.1| Trans-hexaprenyltranstransferase [Bacteroides coprosuis DSM 18011]
          Length = 324

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 10/225 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           S+L E    I+  L +   Q   +  T  N  L+ AIR+     GK +R  LV   A LF
Sbjct: 2   SQLTEIRYPIEQELAEF-QQIFDNSLTSSNPLLMRAIRHIRKSNGKMMRPILVLLLAKLF 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  L    ++E +H  SL+HDD+  +D    RRG+ +V+  ++   +++ G+ LL 
Sbjct: 61  GSIKTNTLYSAVSLELLHTASLVHDDV--VDESDERRGQLSVNALFNNKVSVLVGDFLLA 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +   +   +     ++ + L  +L     L      Q+ ++ ++   E   + +   KT
Sbjct: 119 TSLVQVGLTRDCDIIDVVAHLGQNLADGEIL------QLSNVSNKEFSEDVYYSVIYKKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            AL     +  A+ A AS+        FGE LGI FQ+ DD+ D 
Sbjct: 173 AALFAACAKVAALSAGASKESVIEATKFGEYLGICFQIKDDIFDY 217


>gi|218197333|gb|EEC79760.1| hypothetical protein OsI_21146 [Oryza sativa Indica Group]
          Length = 581

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 14/215 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNVNHLT--ALRVGA 77
           LL+  +++ T++   + +A +    GGK++R  LV       A L  +  LT    R+  
Sbjct: 274 LLRALTYIHTENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTEHQRLAE 333

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +   +   +++ +  
Sbjct: 334 IIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENI 391

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               + SQ++               Q   + D  +      +    KT +L+  +  S A
Sbjct: 392 EVIKLISQVIKDFASGEI------KQASTLFDCDVTLDDYLLKSYYKTASLLASSTRSAA 445

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I +  S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 446 IFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQ 480


>gi|20803894|emb|CAD31472.1| PROBABLE FARNESYL-DIPHOSPHATE SYNTHASE PROTEIN [Mesorhizobium loti
           R7A]
          Length = 324

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 122/235 (51%), Gaps = 14/235 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            +Q+ ++R++  L  LL       +      L++A+RYA L GGK+ R+ L     +L +
Sbjct: 28  WMQDGARRVEQALARLLC-----AEDDGETELMAAMRYATLHGGKRTRALLCLATGALAD 82

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+ G+ L  +
Sbjct: 83  TPAPMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 142

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           AF  ++S      +  R  L+  L   +  +G  GGQ +D+    + ++  ++  + +MK
Sbjct: 143 AFLTLASLDAPGDN--RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMK 200

Query: 185 TGALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADDLLDCEEDLP 235
           +GAL+  +   GA+ A A           L  +    G+  Q+ DD+LD   D  
Sbjct: 201 SGALVRASVRMGALCAIAEDAAHAALYCALDRYSACFGLALQVVDDILDATADTA 255


>gi|330504899|ref|YP_004381768.1| polyprenyl synthetase [Pseudomonas mendocina NK-01]
 gi|328919185|gb|AEB60016.1| polyprenyl synthetase [Pseudomonas mendocina NK-01]
          Length = 322

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV                + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLSGRALGYQADDLRLLAATIEFLHTATLLHDDVVDM--SDMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + Q+    +++ G+ L + +FE++    +     +    +LS    +  +G +  Q+  +
Sbjct: 100 NAQWGNAPSVLVGDFLYSRSFEMMVELGS-----MPVMKILSHATRVIAEGEVL-QLSKV 153

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +D    E     + + KT  L   +  + A +A A++ ++E LR FG++LGI FQL DDL
Sbjct: 154 RDASTTEETYMEVIRGKTAMLFEASTHAAAALAGANEAQREALRTFGDHLGIAFQLVDDL 213

Query: 228 LDCEEDLP 235
           LD + D  
Sbjct: 214 LDYKGDAA 221


>gi|227432104|ref|ZP_03914116.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352131|gb|EEJ42345.1| possible geranyltranstransferase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 304

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 26/238 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  +E   +I+  L++ L   +       +  L++ ++YA+L GGK++R  L     
Sbjct: 3   ELKSFQKEWLPKINQQLENDLSMASP------DTDLVAMMKYAVLNGGKRLRPLLTLAVV 56

Query: 63  SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + F  +   + L+V  AIE +H YSL+HDDLP MDN   RRGKP+VH  Y E  AI+ G+
Sbjct: 57  TSFGESITPSILKVATAIEWVHSYSLVHDDLPVMDNDMFRRGKPSVHALYGEANAILVGD 116

Query: 122 GLLTYAFEIISSPKTQ------LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
            LLT AF +I++  +       L       +  +L    G  GM+ GQ+ D+ +   ++ 
Sbjct: 117 ALLTGAFGVIATANSSCSVEDCLPTEELLLITQNLAREAGGSGMVLGQLHDMDNHTEEQN 176

Query: 176 Q-----VFMIQKMKTGALMCFACESGAIMAHASQNEKE-------RLRCFGENLGIIF 221
                 +  +  MKT AL+ +    GAI+ H + N ++        +  FGE  G+ F
Sbjct: 177 ASTNRLLNDVYSMKTAALIRYTTTLGAILTHQNVNVEDNHFDPKKAMYDFGEKFGLAF 234


>gi|332361748|gb|EGJ39552.1| geranyltranstransferase [Streptococcus sanguinis SK1056]
          Length = 291

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 15/233 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           E  ++I   ++D       +   Q +  L   I Y++  GGK+IR  L+ E    F +  
Sbjct: 5   EKLEKIGLTIEDF------YRSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLEL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                +V +A+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    +
Sbjct: 59  AEAHYQVASALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPY 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG 186
            +++    +L   ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG
Sbjct: 119 GLLARA--ELPSQVKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTG 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            L+ +   +  ++A      +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 177 KLLMYPFVAAGLIAEVEYFVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|168701670|ref|ZP_02733947.1| polyprenyl synthase [Gemmata obscuriglobus UQM 2246]
          Length = 348

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 20/232 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G + S + E  +  D  L       A H        L+  +R+    GK++R  L+  
Sbjct: 33  MFGPIASDIAEAERIFDRTL-------APHKGPFGP--LVEHLRHYR--GKRLRPALLLL 81

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A            + AA+E IH  +L+HDD+  +D   +RR  PT    +    +I+ G
Sbjct: 82  TAEACGGVAPAHHTLAAAMEMIHTATLVHDDV--LDEADVRRHAPTFRAGWGNKVSILLG 139

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L T+AF + S+         R+  +     N    G L  Q+ +  +  + E   F +
Sbjct: 140 DMLFTHAFHLTSTVDG------RACQITGEVTNRVCAGELR-QVTERGNLELSEADYFAV 192

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT AL       GA+ A AS+    ++  +G ++G+ FQ+ADDLLD   
Sbjct: 193 IDGKTAALTECCGRLGALYAGASEEVAAKMASYGRSVGLAFQIADDLLDLTG 244


>gi|258511659|ref|YP_003185093.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478385|gb|ACV58704.1| Trans-hexaprenyltranstransferase [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 321

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 17/221 (7%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
             R++ +LD+     A H+      R LL A      GGK+IR      C          
Sbjct: 14  LDRVERLLDE--RAHADHVDLAKAGRTLLEA------GGKRIRPLFALICGLGEREWSED 65

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++ AA+E IH  +L+HDD+  +D   +RRGKPTV   Y  + A+  G+ L   A +++
Sbjct: 66  VAKIAAALEMIHMATLVHDDV--IDRADLRRGKPTVRKSYGNLAAMYTGDYLFARAIQLL 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +         + ++ ++ L            Q+ D  +              KT  L+  
Sbjct: 124 AEVDNLEVHRLMARGIVLLCEGEI------EQIEDFYNWSQGVMTYLRRIHRKTALLISL 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +C+ GA++  A + E   L  FG  +G+ FQ+ DDLLD   
Sbjct: 178 SCQLGAMVGGAPEREVAALARFGHAVGMAFQIVDDLLDFTG 218


>gi|257054406|ref|YP_003132238.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
 gi|256584278|gb|ACU95411.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
          Length = 337

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 25/223 (11%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-NVNHLTA 72
            ++ IL ++     S ++         A R+ +  GGK+ R       A           
Sbjct: 32  EVEEILREVARSEVSAIE--------EAARHLVDAGGKRFRPMFTLLAAQFGTGGRRDDV 83

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +   AA+E +H  +L HDD+  MD   +RRG P+V+ ++D   AI+ G+ L  +A  +++
Sbjct: 84  ITAAAAVELVHLATLYHDDV--MDEATMRRGAPSVNARWDNSVAILTGDYLFAHASRLVA 141

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALM 189
              T     I                ++ GQM +      D+        +   KTG+L+
Sbjct: 142 DLGTDAARII----------AETFGELVTGQMRETVGPGADDDHVEHYLSVIAQKTGSLI 191

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A   G + + AS    E LR FG+ +G  FQ++DD++D   
Sbjct: 192 ATAGRFGGMFSGASPEHVEALRRFGDIIGTAFQISDDIIDITS 234


>gi|57238790|ref|YP_179926.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578715|ref|YP_196927.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58616777|ref|YP_195976.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel]
 gi|57160869|emb|CAH57771.1| octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58416389|emb|CAI27502.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str. Gardel]
 gi|58417341|emb|CAI26545.1| Octaprenyl-diphosphate synthase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 325

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 13/241 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M     + L E    I   LD++      +   ++   +   I++ +  GGK+IR  +  
Sbjct: 1   MANDFYTTLTELKSLIQQDLDEM-EHLILYQDNKNITLITEIIQHLIKSGGKRIRPIIFF 59

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               + N N    + + AAIE IH  +L+HDD+  +D   +RRG+ T +  +    +I+ 
Sbjct: 60  IICKMLNYNKNDKVYIAAAIEFIHNATLLHDDV--IDESELRRGEKTSNFLWGNKASILV 117

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  +F+ +   K     N+    +LS T N  + G +  QM+   +  I + +   
Sbjct: 118 GDFLLAVSFQWLIQCK-----NLTILSILSKTSNTIIIGEVE-QMVASYNINISQEKYID 171

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           I   KT +L    CES A +A  +  +   L+ FG NLGI FQ+ DD+LD         K
Sbjct: 172 IISAKTASLFEATCESAANLAEVNNEKIHALKQFGYNLGISFQILDDILDYTASETQFGK 231

Query: 237 K 237
           K
Sbjct: 232 K 232


>gi|223943155|gb|ACN25661.1| unknown [Zea mays]
          Length = 413

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 12  NSKRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASL 64
            S  ++ + +DLL        +    N  L+SA       GGK++R  LV       A L
Sbjct: 91  VSSLLEVVSEDLLSLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAEL 150

Query: 65  FNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             ++ LTA   R+   IE IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ 
Sbjct: 151 AGLSELTAEHRRLAEIIEMIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDF 208

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           +   +   +++ +      + SQ++               Q   + D  I      +   
Sbjct: 209 MFAQSSWFLANLENIEVIKLISQVIKDFASGEI------KQASTLFDCDITLDDYLLKSY 262

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  + +S +I +  S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 263 YKTASLIAASTKSASIFSGVSTTICEKMYAYGRNLGLSFQVVDDILDFTQ 312


>gi|297801684|ref|XP_002868726.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314562|gb|EFH44985.1| hypothetical protein ARALYDRAFT_494049 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L      +    N  L+SA       GGK++R  LV       A L  + 
Sbjct: 99  FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLK 158

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+G  IE IH  SLIHDD+  +D   +RRGK TVH  +    A++AG+ +   
Sbjct: 159 ELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQ 216

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   +++ +      + SQ++               Q   + D  ++     +    KT 
Sbjct: 217 ASWYLANLENLQVIKLISQVIKDFASGEI------KQASSLFDCDVELDDYLLKSYYKTA 270

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +       E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 271 SLVAASTKGAAIFSKVESEVAEQMYQFGKNLGLSFQVVDDILDFTQ 316


>gi|307731052|ref|YP_003908276.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
 gi|323527410|ref|YP_004229563.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
 gi|307585587|gb|ADN58985.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
 gi|323384412|gb|ADX56503.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
          Length = 330

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+ ++++ ++   L      +  Q ++ ++SA      GGK++R  L+   A
Sbjct: 12  ASLLAPIAEDMQQVNRVIRHRLASEVM-LINQISEYIISA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++          +R   +LS   NI  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A + GA++A A    +     FG  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAAQLGAVLAGADARTEAAAAEFGRRIGTAFQIMDDWLDYTG 226


>gi|296120422|ref|YP_003628200.1| trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM
           3776]
 gi|296012762|gb|ADG66001.1| Trans-hexaprenyltranstransferase [Planctomyces limnophilus DSM
           3776]
          Length = 338

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 12/218 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++ +L       Q    D L  A R+    GK++R  LV   A      + T   + A +
Sbjct: 33  VERILWNELESDQPCVKDILQHATRFR---GKRLRPILVLLSARACGEVNETHRLLAAVV 89

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D    RR   TV+ +++  T+++ G+ L T+AF + S   T   
Sbjct: 90  EMIHIATLVHDDV--LDEASTRRHVATVNARWNNETSVLFGDYLFTHAFHLASELPTSHA 147

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             I  +       N   +G L  Q+ +  +  ++E   F I   KT  L   +   GA  
Sbjct: 148 CRIIGR-----ATNKVCEGELT-QIHERGNLDLNEETYFKIINGKTAELTAVSAYLGAHY 201

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           A         +  +G  LG+ FQ+ADDLLD    + KK
Sbjct: 202 ADQPAEVVNAVEAYGRKLGLAFQIADDLLDILG-VEKK 238


>gi|189500392|ref|YP_001959862.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
 gi|189495833|gb|ACE04381.1| Polyprenyl synthetase [Chlorobium phaeobacteroides BS1]
          Length = 324

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 10/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           +Q+    +   L     +  + ++T+ N  +   +RY L   GK+IR  LV   A +   
Sbjct: 3   IQDVVFPVSEELKSFRQKYKTALETE-NSLIDKVVRYILKQQGKQIRPLLVMLGAKVCGG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 R     E +H  +LIHDD+  +D   +RRG  +++  +    +++ G+ +L+  
Sbjct: 62  VEEKTYRAAIMAELLHSATLIHDDV--VDGAEMRRGIASINAVWKNKISVLIGDYMLSKG 119

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
                  K  L  ++ S  +  ++    L      Q+   +   I E     +   KT +
Sbjct: 120 LLFSLDNKDYLFLHMVSTAVRRMSEGEIL------QIQKTRSLDITEEDYLRVISDKTAS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  +   GA      + +   L+ +GE LG+ FQ+ DDLLD   D  K
Sbjct: 174 LLSTSSAMGAASVTDDEVKINALKSYGEYLGLAFQIRDDLLDYTGDSKK 222


>gi|71483031|gb|AAZ32465.1| geranylgeranyl pyrophosphate synthase [uncultured euryarchaeote
           Alv-FOS1]
          Length = 352

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSF 56
           M     S + +   +I+  L +   +  + +   ++  L  A+     Y L GGK++R+ 
Sbjct: 1   MPDDWNSFMDKYKSKIEDTLSEFFEKKKTEV---NHPLLREAVEIIEEYTLRGGKRVRAL 57

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------- 109
           L+     ++       ++  A +E +  Y LIHDD+  MD   +RRGK TVH        
Sbjct: 58  LMILGYRMYGGKDDEIIKAAATLELVQSYFLIHDDI--MDESDLRRGKKTVHKIYEEEHL 115

Query: 110 ---------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
                    ++ E   IIAG+    YAFEI +  +       R+   L         G L
Sbjct: 116 HRGFPGNPARFGENLGIIAGDLANVYAFEIFAETEFDSDRKERALQELERIMEYTGYGQL 175

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                 +  EF  E  + ++ + KT    +      GAI+A A   E E LR F   +GI
Sbjct: 176 IDVYSSMLPEF-GEKDLLLLHEYKTANYTIYGPLALGAILAGA---EPESLRDFAIPIGI 231

Query: 220 IFQLADDLLDCEEDLPK 236
            FQL DD+L    D  K
Sbjct: 232 AFQLQDDILGLFGDEKK 248


>gi|116618696|ref|YP_819067.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097543|gb|ABJ62694.1| farnesyl-diphosphate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 304

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 26/238 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
            L S  +E   +I+  L++ L   +          L++ ++YA+L GGK++R  L     
Sbjct: 3   DLKSFQKEWLPKINQQLENDLSMASPDAD------LVAMMKYAVLNGGKRLRPLLTLAVV 56

Query: 63  SLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + F  +   + L+V  AIE +H YSL+HDDLP+MDN   RRGKP+VH  Y E  AI+ G+
Sbjct: 57  TSFGESITPSILKVATAIEWVHSYSLVHDDLPAMDNDMFRRGKPSVHALYGEANAILVGD 116

Query: 122 GLLTYAFEIISSPKTQ------LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
            LLT AF +I++  +       L       +  +L    G  GM+ GQ+ D+ +   ++ 
Sbjct: 117 ALLTGAFGVIATANSSCSVEDCLPTEELLLITQNLAREAGGSGMVLGQLHDMDNHTEEQN 176

Query: 176 Q-----VFMIQKMKTGALMCFACESGAIMAHASQNEKE-------RLRCFGENLGIIF 221
                 +  +  MKT AL+ +    GAI+ H + N ++        +  FGE  G+ F
Sbjct: 177 ASTNWLLNDVYSMKTAALIRYTTTLGAILTHQNVNVEDNHFDPKKAMYDFGEKFGLAF 234


>gi|303238014|ref|ZP_07324557.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
 gi|302481804|gb|EFL44856.1| polyprenyl synthetase [Prevotella disiens FB035-09AN]
          Length = 325

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 10/217 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I   LDD +      + T  +  L  A+ +    GGK++R  L+   A  F      A  
Sbjct: 11  ISKELDDFISLFNKAL-THDDGLLAKALEHIRNRGGKRMRPLLMLLMAKNFGEVTFVAQH 69

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E +H  SL+HDD+  +D    RRG+ +++  Y+   A++ G+ +L+ A   ++  
Sbjct: 70  AAIGLELLHTASLVHDDV--VDESVQRRGQASMNATYNNKVAVLVGDYILSTALLNVAYT 127

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           ++       ++L  +L++   L      Q+ +I ++ I E   + +   KT AL      
Sbjct: 128 QSDDIVRDLAELGRTLSNGEIL------QLTNISNQEISEEVYYQVINQKTAALFEACAV 181

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            GA    AS+   E  R FG+ +GIIFQ+ DD+ D  
Sbjct: 182 IGAKAGRASEEAIEAARLFGQRIGIIFQIRDDIFDYY 218


>gi|194477144|ref|YP_002049323.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Paulinella chromatophora]
 gi|171192151|gb|ACB43113.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Paulinella chromatophora]
          Length = 323

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 11/223 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-- 70
            + +++ L+ LL    + +   H     +A      GGK+IR  +V   +   +      
Sbjct: 8   LQPVESDLETLLSDLRNLIGADHPILQAAAEHLFSAGGKRIRPGIVLLLSRALSPTGDLS 67

Query: 71  -TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
               R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L   A  
Sbjct: 68  PRHRRLAEITEMIHTASLVHDDV--VDEAATRRGVATVHSRFNHRVAVLAGDFLFAQASW 125

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            +++        + S++++ L      QG+         +              KT +L+
Sbjct: 126 HLANLDNLEVVKLLSRVIMDLADGEVKQGLFR------YNTRQSFETYIEKSYCKTASLI 179

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  +  ++A  ++    +L  FG  LG+ FQ+ DD+LD   
Sbjct: 180 ANSARAAGVLADLNEEHLVQLYRFGRQLGLAFQVVDDILDFTG 222


>gi|183220059|ref|YP_001838055.1| octoprenyl-diphosphate synthase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910179|ref|YP_001961734.1| geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167774855|gb|ABZ93156.1| Geranyltranstransferase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778481|gb|ABZ96779.1| Octoprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase; OPP synthetase) [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 317

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 15/228 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           K+Q    + D  LD ++ +    ++      + S       GGK+IR F         NV
Sbjct: 6   KIQSVLSKFDKNLDSIIHEDIPILKKIKKQVITS-------GGKRIRPFSHYLFCQFMNV 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
             ++ L VG+  E IH  SL+HDD+  +DN  IRRGKPT+   +   TAI+AG+ LL   
Sbjct: 59  KDVSWLDVGSVAELIHAASLLHDDV--VDNAPIRRGKPTIGASFGNKTAILAGDYLLACG 116

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
              ++S        I SQ++  L+ +  L      QM   ++  I       I   KT +
Sbjct: 117 ISRLNSLGNPDLMEIFSQVLRDLSVSELL------QMEWEKNPNITLKIYDQIIYGKTAS 170

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L     E+ AI+A+ S+ +++  R FG  LG +FQ  DD LD  ED  
Sbjct: 171 LFGVCTEAAAILANQSKEKRKEFRQFGVRLGKLFQKKDDCLDYFEDSK 218


>gi|20808838|ref|NP_624009.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|254478179|ref|ZP_05091561.1| polyprenyl synthetase superfamily protein [Carboxydibrachium
           pacificum DSM 12653]
 gi|20517490|gb|AAM25613.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|214035908|gb|EEB76600.1| polyprenyl synthetase superfamily protein [Carboxydibrachium
           pacificum DSM 12653]
          Length = 322

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 8/185 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R   V   A   N +    L + AAIE +H  +L+HDD+  +DN  IRR KPT+  
Sbjct: 45  GKMLRPAFVIISAKFGNYDRKKILPLAAAIEMLHMATLVHDDI--IDNALIRRSKPTIQA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y +  A+  G+ L + +F ++S           S+++  +            Q     D
Sbjct: 103 EYGKDYAVFIGDFLFSQSFLLLSDNINVANLKKVSKVVSRICKGEI------DQFESRYD 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I           KT AL   +   GA  ++  +   + L   G N+GI FQ+ DD+LD
Sbjct: 157 INITINDYLKRIAAKTAALFALSFYVGAYESNCGEELAKILGSIGYNIGIAFQIIDDILD 216

Query: 230 CEEDL 234
              + 
Sbjct: 217 YTGEE 221


>gi|56963654|ref|YP_175385.1| heptaprenyl diphosphate synthase component II [Bacillus clausii
           KSM-K16]
 gi|56909897|dbj|BAD64424.1| heptaprenyl diphosphate synthase component II [Bacillus clausii
           KSM-K16]
          Length = 323

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 10/226 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL +  K     ++ +  +    +  +H   L  A    L  GGK+IR  LV       +
Sbjct: 2   KLADIYKAFQGDIEFIEAELERTLSAKHPV-LKEASTGLLKAGGKRIRPVLVLLAGKFGD 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   +   +E IH  SL+HDD+  +DN  +RRG+ TV  ++D   A+  G+ +  +
Sbjct: 61  YQLDRLKHIAVTLELIHMGSLVHDDV--IDNAPLRRGRETVMSRWDNRVAMYTGDYIFGH 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A E      T+   + R   ++S   N   +G +  Q+ D  +            K KT 
Sbjct: 119 AIE-----TTKAFSDKRVHTIISDVMNQICRGEIE-QIRDQYNWDQGLRIYLRRIKRKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L+  +C+ GAI++ A+   ++ L  F   LG+ +Q+ DD+LD   
Sbjct: 173 LLIAVSCQLGAIVSGATDELQKNLYYFAYFLGMSYQIMDDILDFVG 218


>gi|167044663|gb|ABZ09334.1| putative Polyprenyl synthetase [uncultured marine microorganism
           HF4000_APKG7H23]
          Length = 328

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 12/240 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   + ++++   + I   LD ++           +      + YA++ GGKK+R  L  
Sbjct: 1   MVETVDNRIKYIYEPIQAELDRVVEMLRGIAPQAGSSLKQGVLDYAVMSGGKKLRPALTL 60

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +    + +  A+E +H  SL+HDD  ++D+  IRRG+ TV  ++    A++ 
Sbjct: 61  LSAQFHPHDPTAPIIMATAVELLHIASLVHDD--TVDSSTIRRGRATVSSRWGGKVAVML 118

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   +   +            S+ ++ L            +   + +          
Sbjct: 119 GDYLFATSATYVCDTGDIRVIRRFSEAIMELARGELS------EHFSLHNWDQTVADYEE 172

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
               KT +L C A E GA+++ AS++  + L+ +G +LG+ FQ+ DD+LD    E +L K
Sbjct: 173 RTYDKTASLFCTASECGAVLSGASESHCQALKAYGYHLGMAFQIMDDILDFQGTEAELGK 232


>gi|313886949|ref|ZP_07820652.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923646|gb|EFR34452.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 334

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 19/241 (7%)

Query: 1   MNGGLPSK-LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFL 57
           M+  L +K L+   + +   L  L+      +  +    L + IRY L   G K++R  L
Sbjct: 1   MSHSLEAKDLKAYRQIVQDTLQSLM------LDKRTPQALYAPIRYTLEQEGAKRVRPVL 54

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                +        A     A+E  H ++L+HDD+  MDN  +RRGKP+V+ +Y    AI
Sbjct: 55  ALLMQAYLRPEAPLAASPIVALEVFHNFTLLHDDV--MDNSPVRRGKPSVYAKYGLTPAI 112

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDE 174
           ++G+ +L  A+++++   +        Q    +   I       GQ LD++ E   ++ +
Sbjct: 113 LSGDAMLILAYQMLTEGVSPEMLPDLIQNFNKMATLIM-----EGQQLDLEYEQLDYVSK 167

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            Q   +   KT  L+  A   GAI++  S  E E    FG NLG+ FQL DD LD   D 
Sbjct: 168 EQYLEMIGYKTAVLIATATRFGAILSKGSATELESSYAFGWNLGLAFQLQDDYLDLYGDS 227

Query: 235 P 235
            
Sbjct: 228 E 228


>gi|297617605|ref|YP_003702764.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145442|gb|ADI02199.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 322

 Score =  173 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 105/219 (47%), Gaps = 8/219 (3%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+  L+ +  +    + T+ +    +++     GGK++R   V    S ++ +    +
Sbjct: 8   RDIEPQLEKVEQELVRAITTEISLLKEASVHLVKAGGKRLRPAFVLLSGSFYSSSLDGLI 67

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +  A+E +H  +L+HDD+  +DN + RRG+ TV   +    ++ +GN +L  +  +I++
Sbjct: 68  PLAVALELVHMATLVHDDV--IDNSFTRRGQKTVKACWGNRVSLYSGNYILAKSLSLIAA 125

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +     +I + + + +     +      QML   D            + KT  LM  +C
Sbjct: 126 YERPDIIDILATVSMKVCEGEII------QMLSCFDVGQGYKDYLRRIERKTALLMSLSC 179

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++GA++  A  ++   LR FG  LG+ FQ+ DD+LD   
Sbjct: 180 QTGALVGGAPADKVTVLRRFGYYLGMAFQITDDVLDFVA 218


>gi|254464346|ref|ZP_05077757.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I]
 gi|206685254|gb|EDZ45736.1| polyprenyl synthetase [Rhodobacterales bacterium Y4I]
          Length = 294

 Score =  173 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 89/238 (37%), Positives = 133/238 (55%), Gaps = 12/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQ--HNDRLLSAIRYALLGGKKIRSFLVTECA 62
           + +     ++     L D   +  +HM+ +    D L +A+RYA+ GGK +R FLV E A
Sbjct: 1   MSAAADTRTRPFAGALKDAQARITAHMEARLAGGDDLHAAMRYAITGGKMLRGFLVLESA 60

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L  V    A+    AIECIH YSL+HDDLP MD+  +RRG+PTVH ++DE  A++AG+ 
Sbjct: 61  RLHGVPAEAAIEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEAMAVLAGDS 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVF 178
           L ++AFE+++ P          + +     + G  GM+ GQMLDI  E   E     ++ 
Sbjct: 121 LQSFAFELLADPSVGPHALTLIRGL---AQSSGKDGMVSGQMLDIAAETATEPLTLKEIT 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +Q  KTG L+ ++  +GA++A A       LR +   LG+ FQ+ADD+LD E D  K
Sbjct: 178 RLQGRKTGCLIEWSATAGAVLAGADP---APLRQYASALGLAFQIADDILDVEGDAAK 232


>gi|332982510|ref|YP_004463951.1| polyprenyl synthetase [Mahella australiensis 50-1 BON]
 gi|332700188|gb|AEE97129.1| Polyprenyl synthetase [Mahella australiensis 50-1 BON]
          Length = 322

 Score =  173 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 18/231 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           ++++   +D  +   L +T   + +   ++L  +      GGK++R  +V   +      
Sbjct: 11  IKQDMDSVDNYIKRAL-KTHQRLLSDVINQLAGS------GGKRLRPLMVILSSRFGGYK 63

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + + AAIE +H  +L+HDD+  +D+  IRRG+PTV  ++ +  A+  G+ L +  F
Sbjct: 64  RDEIIHLAAAIEILHMATLVHDDI--IDDAPIRRGEPTVQSRWGKDVAVFTGDFLFSTVF 121

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            ++S   +       S+++  +            Q     +  +         + KT  L
Sbjct: 122 SLLSKEVSFDDLYEVSRVVKQICEGEV------DQYQHRYNTAVSVRSYLRRIRHKTADL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
              +C  GA  A  S+     L  FG + G++FQ+ DD+LD E    +L K
Sbjct: 176 FALSCVIGAKRAGCSKPIYNALENFGMDFGMVFQIIDDILDFEGQQEELGK 226


>gi|88855944|ref|ZP_01130606.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1]
 gi|88814811|gb|EAR24671.1| trans-hexaprenyltranstransferase [marine actinobacterium PHSC20C1]
          Length = 358

 Score =  173 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 13/229 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYAL-LGGKKIRSFLVTECASLFNV 67
           +  +  I+  L+ +     SHM     D +  A  RY L  GGK++R  L    A L + 
Sbjct: 31  RRFAAAIEEGLEQVEAGLLSHM--TFADEIADATSRYLLEAGGKRVRPVLTLLTAQLGSG 88

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N+   +    A+E  H  SL HDD+  MD   +RRG P+    +    AI+ G+ L   A
Sbjct: 89  NNANVVTAAQAVEITHLASLYHDDV--MDEAQLRRGVPSAQSVWGNSVAILTGDLLFARA 146

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            ++I+          R+ ++ S T      G L   +     E    T    +   KTG+
Sbjct: 147 SKLIAGLGE------RALILQSNTFERLCLGQLHETLGPKPGEN-PVTHYLQVLADKTGS 199

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+  A E G + + A       +R FGE +G+ FQL DD++D  ++  K
Sbjct: 200 LIATAAEVGVMFSDAPDEYTVPVRDFGEKIGVAFQLIDDVIDLSDETGK 248


>gi|87310419|ref|ZP_01092549.1| polyprenyl synthase [Blastopirellula marina DSM 3645]
 gi|87286918|gb|EAQ78822.1| polyprenyl synthase [Blastopirellula marina DSM 3645]
          Length = 309

 Score =  173 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 13/216 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVG 76
             ++++L +  S       + +   + Y  +LGGK++R  L+   A            +G
Sbjct: 2   AAVEEILNREMSS----RYESVNEVVSYGCMLGGKRMRPALLLLAAKACGQVTDAHYTLG 57

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A IE IH  +L+HDD+  +D    RR   TV+ +++  T+++ G+ L ++AF + +   T
Sbjct: 58  AVIEMIHTATLVHDDV--LDEADQRRHLATVNSRWNNETSVLLGDFLFSHAFYLATMLPT 115

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                  +  M+  + NI  +G L  Q+   Q     E +   I   KT  L   ACE G
Sbjct: 116 TC-----AARMIGRSTNIVCEGELR-QIASRQAFETTEEEYLAIIDAKTAELCACACELG 169

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A  A AS+ +   L  FG +LGI FQ+ADDLLD E 
Sbjct: 170 ARYAEASEEQIAALEKFGRDLGIAFQIADDLLDVEG 205


>gi|84622979|ref|YP_450351.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|122879101|ref|YP_200077.6| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188577962|ref|YP_001914891.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84366919|dbj|BAE68077.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188522414|gb|ACD60359.1| polyprenyl synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 332

 Score =  173 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 15/222 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 25  AAVDAVIRRRLASDVM-LINQIADHIISA------GGKRLRPMLVILAGHAAGGSGPEHH 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 78  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 136 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA+ + A    +++L  +G  LG  FQ+ADD+LD   +  
Sbjct: 190 RLGALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAA 231


>gi|324990647|gb|EGC22583.1| geranyltranstransferase [Streptococcus sanguinis SK353]
          Length = 291

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/220 (33%), Positives = 117/220 (53%), Gaps = 9/220 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIEC 81
           L     +   Q +  L   I Y++  GGK+IR  L+ E    F +       +V AA+E 
Sbjct: 12  LTIEDFYKSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFGLELAEAHYQVAAALEM 71

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    + +++    +L   
Sbjct: 72  IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARA--ELPSQ 129

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM 199
           ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG L+ +   +  ++
Sbjct: 130 VKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLGDLKTIHANKTGKLLTYPFVAAGLI 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             A Q+ +++LR  G+ LG+ FQ+ DD+LD     E+L K
Sbjct: 190 VQAQQSVQDKLRRIGDLLGLAFQVRDDILDVTASFEELGK 229


>gi|260431854|ref|ZP_05785825.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415682|gb|EEX08941.1| geranyltranstransferase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 288

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 131/236 (55%), Gaps = 15/236 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              +L +++  I    D +L        T+       A+ YA  GGK++R FLV E A L
Sbjct: 2   FSERLAQDAALIQAQFDLVLGALDDVDVTR-------AMAYATQGGKRLRGFLVLESARL 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             ++   A+     IE +H YSL+HDDLP MD+  +RRG+PTVH Q++E  A++AG+ L 
Sbjct: 55  HGMDETCAIWPATGIEALHAYSLVHDDLPCMDDDDLRRGRPTVHKQWNEGIAVLAGDALQ 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
             AFE+ + P+      IR+ L L+L    G +GM+ GQ LDI  E     +    +  +
Sbjct: 115 ALAFELCARPEVG-PAEIRADLALTLAQAAGARGMVLGQALDIAAETAQQPLSLEDITRL 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           Q  KTGAL+ ++  +GA +A  +    ER+R +   LG+ FQ+ADD+LD E D+ K
Sbjct: 174 QAGKTGALIEWSGCAGARLAGENP---ERMRLYSRALGLAFQIADDILDVEGDVQK 226


>gi|262376679|ref|ZP_06069907.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145]
 gi|262308389|gb|EEY89524.1| solanesyl diphosphate synthase [Acinetobacter lwoffii SH145]
          Length = 325

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 19/196 (9%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A      +     ++ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAAKACGAENLEPHRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L++ AF+++              ++L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLISRAFDLLVDLNN---------MVLLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI++      ++ L+ F  + G  FQ+
Sbjct: 154 LQSQHQPETTEATYLNIIHGKTSRLFELATEGAAILSDKD-EFRQPLKTFAGHFGNAFQI 212

Query: 224 ADDLLDCEED---LPK 236
            DD+LD   D   L K
Sbjct: 213 IDDILDYTSDADTLGK 228


>gi|33240492|ref|NP_875434.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33238020|gb|AAQ00087.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 323

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 14/236 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + I+  L+ LL      +   H     +A      GGK+IR  +V   +   +
Sbjct: 2   ATVTELLQPIEIDLEHLLKDLRDLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLISKALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     R+    E IH  SL+HDD+  +D    RRG  TVH ++D   A++AG+ L
Sbjct: 62  AEGELSSKHRRLAEITEMIHTASLVHDDV--LDEASTRRGVDTVHNRFDHKVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDNLDVVKLLSRVIMDLAEGEVKQGIYR------FDPNQSLDVYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           KT +L+  + ++  ++++ S    + L  FG+ LG+ FQ+ DD+LD   D   L K
Sbjct: 174 KTASLIANSAQAVGVLSNESDYHLKCLYNFGKQLGLAFQVVDDILDFTSDDKQLGK 229


>gi|30699332|ref|NP_177972.2| SPS1 (solanesyl diphosphate synthase 1);
           trans-octaprenyltranstransferase [Arabidopsis thaliana]
 gi|19911233|dbj|BAB86941.1| solanesyl diphosphate synthase [Arabidopsis thaliana]
 gi|57999783|dbj|BAD88533.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
 gi|98960969|gb|ABF58968.1| At1g78510 [Arabidopsis thaliana]
 gi|332197993|gb|AEE36114.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 406

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 15/216 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLT--ALRVG 76
           L      +    N  L+SA       GGK++R  LV       A L  +  LT    R+ 
Sbjct: 98  LNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLA 157

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE IH  SLIHDD+  +D   +RRGK TVH  +    A++AG+ +   A   +++ + 
Sbjct: 158 EIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLEN 215

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                + SQ++               Q   + D      +  +    KT +L+  + +  
Sbjct: 216 LEVIKLISQVIKDFASGEI------KQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGA 269

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AI +    +  E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 270 AIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQ 305


>gi|150395683|ref|YP_001326150.1| polyprenyl synthetase [Sinorhizobium medicae WSM419]
 gi|150027198|gb|ABR59315.1| Polyprenyl synthetase [Sinorhizobium medicae WSM419]
          Length = 338

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 117/232 (50%), Gaps = 22/232 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           Q + +R++ ++   L +  S +Q   +  + L+S+      GGK++R  L    AS+F  
Sbjct: 25  QSDMERVNQLI---LSKAGSDVQMIPEVANHLISS------GGKRLRPMLTLAAASMFGY 75

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +++  ++E +H  +L+HDD+  +D   +RRGK T    +    +++ G+ LL  A
Sbjct: 76  EGDGHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTIWGNQASVLVGDFLLGQA 133

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++    +     + +  +LS   ++  +G +  Q+   ++    E     + + KT A
Sbjct: 134 FRMMVDVGS-----LDALDVLSTAASVIAEGEVL-QLSVAKNMETTEDDYLQVIRAKTAA 187

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           L   A E G I+A AS+ ++  L+ +G NLG+ FQL DD+LD      DL K
Sbjct: 188 LFAAASEVGPIVASASKADRNALKSYGTNLGLAFQLVDDVLDYGGSSSDLGK 239


>gi|110739325|dbj|BAF01575.1| polyprenyl diphosphate synthase [Arabidopsis thaliana]
          Length = 406

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 15/216 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLT--ALRVG 76
           L      +    N  L+SA       GGK++R  LV       A L  +  LT    R+ 
Sbjct: 98  LNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLA 157

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE IH  SLIHDD+  +D   +RRGK TVH  +    A++AG+ +   A   +++ + 
Sbjct: 158 EIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLEN 215

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                + SQ++               Q   + D      +  +    KT +L+  + +  
Sbjct: 216 LEVIKLISQVIKDFASGEI------KQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGA 269

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AI +    +  E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 270 AIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQ 305


>gi|196230032|ref|ZP_03128895.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
 gi|196225629|gb|EDY20136.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
          Length = 330

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 11/217 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +++ + Q A          +  A+      GK++R  L             + L +   +
Sbjct: 21  VEERIRQQARAFDPAVEGYVAYAVESH---GKRLRPALALLAGGATGNICPSHLDLAVIL 77

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D    RRG+PT + ++    +++ G+ L  +A ++     T   
Sbjct: 78  ELIHAATLVHDDI--LDGADKRRGQPTANAKWGNAISVLLGDCLFAHALKL----STSFP 131

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           +   S+ +      +    ++  Q     D  +     + I +MKT AL   ACE GA++
Sbjct: 132 NGEISRRIAHAASEVCSGEII--QTQRRFDLKLSVPDYYKIIEMKTAALFAAACELGALI 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             A+    + LR FG  LG  +Q+ DD+LD   D  K
Sbjct: 190 NEAAPEVIDALRIFGLQLGTAYQIYDDVLDLAGDEAK 226


>gi|302391328|ref|YP_003827148.1| trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM
           5501]
 gi|302203405|gb|ADL12083.1| Trans-hexaprenyltranstransferase [Acetohalobium arabaticum DSM
           5501]
          Length = 335

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 110/232 (47%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + ++ K+++  L ++  +T   +  + ++RLL+A      GGK++R  LV     L + +
Sbjct: 10  INKDLKQVEQKLKEV-TETKFSLLYRISNRLLNA------GGKRLRPLLVLLSGKLNDHS 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +GA++E +H  +LIHDD+  +DN   RR + T++  +    A+++G+ L T A 
Sbjct: 63  AQDLISIGASVELLHMATLIHDDV--IDNSLHRRSENTINQDWGNKVAVLSGDLLYTQAL 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++         N    ++  +            Q +   D   D          KT  L
Sbjct: 121 KLLVEHGNDEIVNYMLDIVGLICEGEA------KQAVTNHDLNQDMKDYINKITKKTALL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +  +C+ GA+++     +   +  +G+NLGI FQ+ +DL D   D   L K+
Sbjct: 175 IGASCKLGAMVSQVDAKKAAAMESYGKNLGIAFQIINDLNDIVADKEELGKE 226


>gi|82395324|gb|ABB72030.1| decaprenyl diphosphate synthase [Sinorhizobium meliloti]
          Length = 338

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 14/237 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALL-GGKKIRSFLVTECA 62
            ++       +D  L D+       +    +D   +     + +  GGK++R  L    A
Sbjct: 11  KNQQASVKPLVDLTLSDMERVNQPILSKAGSDVQMIPEVANHLISSGGKRLRPMLTLAAA 70

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           S+F       +++  ++E +H  +L+HDD+  +D   +RRGK T    +    +++ G+ 
Sbjct: 71  SMFGYEGDGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTARTFWGNQASVLVGDF 128

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL  AF ++    +     I +  +LS   ++  +G +  Q+   ++    E     + +
Sbjct: 129 LLGQAFRMMVDVGS-----IDALDVLSTAASVIAEGEVL-QLSVAKNMETTEDDYLRVNR 182

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            KT AL   A E G I+A  S+ ++  L+ +G NLG+ FQL DD+LD      DL K
Sbjct: 183 AKTAALFAAASEVGPIVAGGSKADRNALKSYGTNLGLAFQLVDDVLDYGGTSSDLGK 239


>gi|302142790|emb|CBI20085.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L Q    +    N  L+SA       GGK++R  LV       A +  + 
Sbjct: 102 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 161

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    A++AG+ +   
Sbjct: 162 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 219

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +   +++ +      + SQ++               Q   + D  ++  +  +    KT 
Sbjct: 220 SSWYLANLENLEVIKLISQVIKDFASGEI------KQASSLFDCELELEEYLLKSFYKTA 273

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +    N  E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 274 SLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQ 319


>gi|270295030|ref|ZP_06201231.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478023|ref|ZP_07937205.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
 gi|270274277|gb|EFA20138.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905812|gb|EFV27584.1| polyprenyl synthetase [Bacteroides sp. 4_1_36]
          Length = 324

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A LF       L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLFGKVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++AG+ LL  A   +   +     +I S L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLAGDYLLATALVQVGMTRNHDIIDIVSCLGQDLADGELL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT  L     ++GA+   AS  + E  R FGE +G+ FQ+ DD+ D
Sbjct: 157 LHFSEEVYFDVIRKKTAVLFAACTKAGALSVGASDEKAESARLFGEYIGLCFQIKDDIFD 216

Query: 230 CEE--DLPK 236
             E  ++ K
Sbjct: 217 YSESKEIGK 225


>gi|170695309|ref|ZP_02886455.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
 gi|170139709|gb|EDT07891.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
          Length = 330

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+ ++++ ++   L      +  Q ++ ++SA      GGK++R  L+   A
Sbjct: 12  ASLLAPIAEDMQQVNRVIRHRLASEVM-LINQISEYIISA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGETTGHRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++          +R   +L+   NI  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILAEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A + GA++A A    +     FG  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAAQLGAVLAGADARIEAAAAEFGRRIGTAFQIMDDWLDYTG 226


>gi|87303352|ref|ZP_01086140.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. WH 5701]
 gi|87282000|gb|EAQ73962.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. WH 5701]
          Length = 323

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGK+IR  +V   +   +
Sbjct: 2   ATVAELLQPVENDLETLLSDLRSLIGAGHPILQAAAEHLFSAGGKRIRPGIVLLLSRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +        R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PDGELSSRHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNNRLAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDDLAVVKLLSRVIMDLADGEVRQGLYR------YDTGQSFETYLDKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  + ++  +++  + +  E L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSAKASGVLSGLADDRLEDLYRFGRQLGLAFQVVDDILDFTG 222


>gi|269837416|ref|YP_003319644.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786679|gb|ACZ38822.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 346

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 18/222 (8%)

Query: 29  SHMQTQHNDRLLSAIRYALL------------GGKKIRSFLVTECASLFNVNHLTALRVG 76
            H  ++ +  L   +RY L              GK+IR  +     +    +   A+   
Sbjct: 24  GHRFSERDLPLYGVLRYHLGWADPDFRPATADAGKRIRPLICVLACAAAGGDPDVAVPTA 83

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A+IE +H ++L+HDD+   D    RR +PTV   +    AI AG+ L   +   +     
Sbjct: 84  ASIELLHNFTLVHDDVQ--DGSDRRRHRPTVWALWGVGQAINAGDALFALSQLPLLGSHA 141

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193
           +     R   +    +   L+ ++ GQ+LD+  E   E        + + KT +L+ FA 
Sbjct: 142 RGVPPARVIGVAREFNATVLR-IVEGQVLDLCFEERWEIPVASYLNMIEGKTASLVAFAA 200

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            SGA++A A     ER R FG  LG+ FQ+ DDLL    +  
Sbjct: 201 WSGAVLAGADAERAERYRAFGRALGLGFQVQDDLLGIWGEAE 242


>gi|218245257|ref|YP_002370628.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801]
 gi|257058290|ref|YP_003136178.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802]
 gi|218165735|gb|ACK64472.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8801]
 gi|256588456|gb|ACU99342.1| solanesyl diphosphate synthase [Cyanothece sp. PCC 8802]
          Length = 323

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---TALRVGA 77
            LL      +    +  L +A  +    GGK+IR  +V   +    +         R+  
Sbjct: 16  RLLTNNLKQLVGARHPILGAAAEHLFDAGGKRIRPAIVLLVSRATMLEREITPRHRRLAE 75

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   +++    
Sbjct: 76  ITEMIHTASLVHDDV--VDEAELRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLANLDNL 133

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               + S+++        LQG+      +  D  +           KT +L+  + ++ A
Sbjct: 134 EVVKLLSEVIRDFAEGEILQGI------NRFDTTLTLEAYLEKSYYKTASLIANSAKAAA 187

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +++ + +   + L  +G +LG+ FQ+ DD+LD  
Sbjct: 188 VLSDSPREMIDHLYDYGRDLGLAFQIVDDILDFT 221


>gi|66814354|ref|XP_641356.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4]
 gi|74855905|sp|Q54VJ9|DPS1_DICDI RecName: Full=Decaprenyl-diphosphate synthase; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           1; AltName: Full=Coenzyme Q biosynthesis protein 1;
           AltName: Full=Decaprenyl pyrophosphate synthase;
           AltName: Full=Trans-prenyltransferase; Short=TPT
 gi|60469379|gb|EAL67373.1| hypothetical protein DDB_G0280293 [Dictyostelium discoideum AX4]
          Length = 456

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 15/210 (7%)

Query: 27  TASHMQTQHNDRLLSAIR--YALLGGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIH 83
           T S   ++    +LS+I   Y  L GK+IR  +V   +   +   H + L++   +E IH
Sbjct: 157 TYSPSPSKKTHPILSSISSYYFELKGKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMIH 216

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+HDD+  +D    RR   +++  Y    AI+ G+ LL  A  ++S+ +        
Sbjct: 217 TASLVHDDV--IDEASTRRDVISINHSYTNKLAILCGDYLLARASVVLSTIRNPD----- 269

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKMKTGALMCFACESGAIMAHA 202
               ++   +  L  ++ G+ +  +   +           +KTG+L+  +C S AI++ A
Sbjct: 270 ----VTECMSTALAELVEGEFMQAKSNGVVSFDNYLQKTYLKTGSLITNSCRSAAILSGA 325

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             N       FG+NLG+ FQ+ DDLLD   
Sbjct: 326 DSNIINISTEFGKNLGLAFQIVDDLLDYTG 355


>gi|264676899|ref|YP_003276805.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
 gi|299529717|ref|ZP_07043154.1| Polyprenyl synthetase [Comamonas testosteroni S44]
 gi|262207411|gb|ACY31509.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
 gi|298722580|gb|EFI63500.1| Polyprenyl synthetase [Comamonas testosteroni S44]
          Length = 309

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 106/219 (48%), Gaps = 15/219 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + +D ++   L  T+  +  Q +  +++A      GGK++R  L+   A           
Sbjct: 2   REVDIVIAQRLT-TSVPLIAQISQYIIAA------GGKRLRPALLLLIAGALGHQGKNKY 54

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L T +F+++  
Sbjct: 55  ILAAVVELIHTATLLHDDV--VDESTLRRGRATANETFGNPASVLVGDFLHTRSFQMMVE 112

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             +     +R   +LS   N+  +G +  Q+++  D  ++E     + + KT  L   + 
Sbjct: 113 VGS-----MRVLQILSDATNVIAEGEV-QQLINTHDASLNEAGYLHVIRSKTAQLFEASA 166

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  A++A A+   ++    +G+ LG  FQ+ DD+LD   
Sbjct: 167 QLAAVLAGATPEVEQACAAYGQALGTAFQIIDDVLDYTG 205


>gi|37903500|gb|AAP56240.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
          Length = 358

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 77  GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   +
Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSTAASVIAEGEVL-QLSVAK 188

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 189 NMETTEDDYLQVIRAKTAALFAAAAEVGPIVAKTDKATRSALKSYGMNLGLAFQLVDDVL 248

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 249 DYGGKSADLGK 259


>gi|262369367|ref|ZP_06062695.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046]
 gi|262315435|gb|EEY96474.1| octaprenyl-diphosphate synthase [Acinetobacter johnsonii SH046]
          Length = 325

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 16/192 (8%)

Query: 48  LGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A      +     ++ A IE +H  +L+HDD+  +D   +RRG+PT
Sbjct: 45  AGGKRMRPIMCLLAAKACGAEDLERQRKLAAIIEMLHTATLVHDDV--VDESGLRRGRPT 102

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  ++  TA++ G+ L++ AF+++              + L    + G   +  G++L 
Sbjct: 103 ANATWNNQTAVLVGDFLISRAFDLLVDLG---------DMTLLKDFSTGTCEIAEGEVLQ 153

Query: 167 IQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +Q +      E     I   KT  L   A E  AI++  +   +E LR F  + G  FQ+
Sbjct: 154 LQAQHQPETTEQTYLDIIHGKTSRLFELATEGAAILSG-TPQYREPLRLFAGHFGNAFQI 212

Query: 224 ADDLLDCEEDLP 235
            DD+LD   D  
Sbjct: 213 IDDILDYTSDAE 224


>gi|257092398|ref|YP_003166039.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257044922|gb|ACV34110.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 320

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +        + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 41  GGKRLRPALVLLAAGALDYRGTHHHELAAVIEFIHTATLLHDDV--VDGSDLRRGRDTAN 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++ +      D++R   +LS   N+  +G +  Q+++  
Sbjct: 99  AIFGNSASVLVGDFLYSRAFQMMVA-----VDDMRVMRVLSDATNVIAEGEVL-QLMNCH 152

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +DE     + + KT  L   A + GAI+   S   ++ +  +G +LG  FQL DD+L
Sbjct: 153 DADVDEAGYLQVIRYKTAKLFEAAAQLGAIIGGGSAAAEQGMATYGIHLGTAFQLIDDVL 212

Query: 229 DCEE 232
           D   
Sbjct: 213 DYSG 216


>gi|112950409|gb|ABI26723.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
          Length = 358

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 77  GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   +
Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSTAASVIAEGEVL-QLSVAK 188

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 189 NMETTEDDYLQVIRAKTAALFAAAAEVGPIVAKTDKATRSALKSYGMNLGLAFQLVDDVL 248

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 249 DYGGKSADLGK 259


>gi|225461848|ref|XP_002285665.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 421

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L Q    +    N  L+SA       GGK++R  LV       A +  + 
Sbjct: 103 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 162

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    A++AG+ +   
Sbjct: 163 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 220

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +   +++ +      + SQ++               Q   + D  ++  +  +    KT 
Sbjct: 221 SSWYLANLENLEVIKLISQVIKDFASGEI------KQASSLFDCELELEEYLLKSFYKTA 274

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +    N  E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 275 SLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQ 320


>gi|147844134|emb|CAN80568.1| hypothetical protein VITISV_004505 [Vitis vinifera]
          Length = 421

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L Q    +    N  L+SA       GGK++R  LV       A +  + 
Sbjct: 103 FEVVADDLQILNQNLQSIVGAENPVLMSAAEQIFGAGGKRMRPALVFLVSRATAEIAGLK 162

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  Y    A++AG+ +   
Sbjct: 163 DLTIKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHQLYGTRVAVLAGDFMFAQ 220

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +   +++ +      + SQ++               Q   + D  ++  +  +    KT 
Sbjct: 221 SSWYLANLENLEVIKLISQVIKDFASGEI------KQASSLFDCELELEEYLLKSFYKTA 274

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +    N  E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 275 SLIAASTKGAAIFSGVDSNIAEQMYEYGRNLGLSFQIVDDILDFTQ 320


>gi|21328644|gb|AAM48650.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
           proteobacterium]
          Length = 295

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 15/230 (6%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
            S RI+  + D +    +        +L SA+RYA+  GG +IR  ++   A+    +  
Sbjct: 3   FSTRIEAAISDAVNLGQT---APSPAKLASALRYAVSPGGARIRPTILMSVAAACGDDRP 59

Query: 71  TAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                  AA+ECIHC SL+HDDLP  D+   RRGKP++H  Y E  A++AG+ L+  AF+
Sbjct: 60  ELTNAAAAALECIHCASLVHDDLPCFDDAETRRGKPSLHRAYSEPLAVLAGDSLIVMAFQ 119

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I++   +         + +         G+  GQ  + + +      +    + KTGAL 
Sbjct: 120 ILTRHASIDPQRAIGLMNILAEQTGMPNGICAGQGWESEQKI----DLRAYHRAKTGALF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             A + GAI A     + + L   G  +G  FQ+ADDL D    E +L K
Sbjct: 176 VAATQMGAIAAGQDGAQWDEL---GSRIGEAFQVADDLRDALYNEAELGK 222


>gi|113474063|ref|YP_720124.1| trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101]
 gi|110165111|gb|ABG49651.1| Trans-hexaprenyltranstransferase [Trichodesmium erythraeum IMS101]
          Length = 323

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS---LFNVNHLT 71
           ++  L  LL      +    +  L +A  +     GK+IR  +V   +    L       
Sbjct: 11  VEADL-QLLTNNLKQLVGARHPILYAAAEHLFRVKGKRIRPAIVLLISRTTMLTQEITPK 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   IRRG PTVH  +    A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDI--VDESEIRRGVPTVHSLFTNRIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L            Q L   +  +           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSKVIMDLAEGEI------QQGLHRFNTDLSIEAYLEKSYYKTSSLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++ AI++       + +  +G  +G+ FQ+ DD+LD   
Sbjct: 182 SSKAAAIISDVPPEIVQDMYYYGRYIGLAFQIVDDILDFTS 222


>gi|89075549|ref|ZP_01161954.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34]
 gi|89048689|gb|EAR54261.1| putative octaprenyl-diphosphate synthase [Photobacterium sp. SKA34]
          Length = 323

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLAVLAARALGYDGDKHTTAAAFIEFIHTATLLHDDV--VDESNMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + +  AI+A A    +  L+ +G  LG  FQL DD+L
Sbjct: 155 DPNTTEDSYMQVIYSKTARLFEASTQIAAIIAQAPAEIELALQEYGRYLGTAFQLIDDVL 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYIAD-GKE 222


>gi|323343701|ref|ZP_08083928.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269]
 gi|323095520|gb|EFZ38094.1| decaprenyl diphosphate synthase [Prevotella oralis ATCC 33269]
          Length = 336

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 25/228 (10%)

Query: 7   SKLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           S+L++ +K  +  L     LL Q   H++ +               GK++R  L+   A 
Sbjct: 24  SELEDFTKLFNQSLSHDSGLLSQALEHIRKRA--------------GKRMRPMLILLIAK 69

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F      +      +E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++ G+ +
Sbjct: 70  NFGDITPVSQNAAVGLELLHTASLVHDDV--VDESGERRGQASVNATYNNKVAVLVGDYI 127

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L+ A   +S   ++      +QL  +L+    L      Q+ +IQ+  I E   + + K 
Sbjct: 128 LSTALLYVSYTHSETIVRYLAQLGRTLSDGEIL------QLSNIQNREISEKVYYEVIKQ 181

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           KT AL       GA+ AHAS+++ E  + FG+NLGIIFQ+ DD+ D  
Sbjct: 182 KTAALFEACAGIGALSAHASESDVEAAKKFGQNLGIIFQIRDDIFDYY 229


>gi|313894963|ref|ZP_07828522.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas
           sp. oral taxon 137 str. F0430]
 gi|312976416|gb|EFR41872.1| putative heptaprenyl diphosphate synthase component 2 [Selenomonas
           sp. oral taxon 137 str. F0430]
          Length = 325

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 15/233 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   +   ++E+   ++T L+  L  + S + +     L+S+      GGK++R  L   
Sbjct: 1   MKNDMFDVIEEDLTVLETALEAAL-SSDSALVSDIGAHLVSS------GGKRLRPALFLL 53

Query: 61  CASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A      +   A+ +  A+E IH  SL+HDD+  +D    RRG  T + ++    AI++
Sbjct: 54  AARGGTAFDRDRAMPIAVALELIHTASLVHDDV--IDEADTRRGAATTNAKWGNQVAILS 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ +   AF+ ++         +R   ++       +      Q   +    + E   + 
Sbjct: 112 GDYIFARAFKQVARVGYSWHIYMRLADLVCTLSEGEIL-----QDHTVYQVPVSEDAYYE 166

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + KT   +   CE GA +   S  +      +G  +G+ FQ+ DDLLD ++
Sbjct: 167 RIRKKTADFLEICCELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQ 219


>gi|254513023|ref|ZP_05125089.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11]
 gi|221533022|gb|EEE36017.1| farnesyl diphosphate synthase [Rhodobacteraceae bacterium KLH11]
          Length = 288

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 8/202 (3%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           +  A+ YA  GGK++R FLV E A L  ++   A+     IE +H YSL+HDDLP MD+ 
Sbjct: 29  ITRAMAYATAGGKRLRGFLVLESARLHEIDLARAIWPATGIEALHAYSLVHDDLPCMDDD 88

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG+PTVH+++DE TA++AG+ L T AFE+ + P+      +R++L L+L    G QG
Sbjct: 89  DLRRGRPTVHVKWDEGTAVLAGDALQTLAFELCTRPEVG-DAGVRAELALTLAQASGAQG 147

Query: 159 MLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           M+ GQ LDI  E     +   ++  +Q  KTGAL+ ++  +GA MA A  +    LR + 
Sbjct: 148 MVLGQALDIAAETAATPLTLPEITRLQSGKTGALIEWSACAGARMAQADPD---PLRQYA 204

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
             LG+ FQ+ADD+LD E D  K
Sbjct: 205 RALGLAFQIADDILDVEGDADK 226


>gi|117508|sp|P22873|CRTE_ESCVU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; AltName: Full=Farnesyltranstransferase
 gi|148400|gb|AAA24819.1| phytoene synthase [Pantoea agglomerans]
 gi|148408|gb|AAA64977.1| pyrophosphate synthase [Pantoea agglomerans]
          Length = 307

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 76/222 (34%), Positives = 113/222 (50%), Gaps = 12/222 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH-- 69
            + ID  L  LL +T S       D +  A+R   +  GK+IR  L+   A         
Sbjct: 19  RQSIDDHLAGLLPETDS------QDIVSLAMREGVMAPGKRIRPLLMLLAARDLRYQGSM 72

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            T L +  A+E  H  SL+ DD+P MDN  +RRG+PT H ++ E  AI+A  GLL+ AF 
Sbjct: 73  PTLLDLACAVELTHTASLMLDDMPCMDNAELRRGQPTTHKKFGESVAILASVGLLSKAFG 132

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGA 187
           +I++    L    R+Q +  L+  +G+QG++ GQ  D+ D  +D T   +     +KTG 
Sbjct: 133 LIAATG-DLPGERRAQAVNELSTAVGVQGLVLGQFRDLNDAALDRTPDAILSTNHLKTGI 191

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           L     +  AI + +S + +E L  F  + G  FQL DDL D
Sbjct: 192 LFSAMLQIVAIASASSPSTRETLHAFALDFGQAFQLLDDLRD 233


>gi|163781995|ref|ZP_02176994.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882527|gb|EDP76032.1| octoprenyl-diphosphate synthase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 308

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 15/218 (6%)

Query: 23  LLLQTASHMQTQHNDRL---LSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           LL      +  + N ++   L   RY +  GGK++R  +      +       AL +G  
Sbjct: 3   LLEAIERRLLEELNPKVKLVLETGRYLIDGGGKRLRPLITMLSCGMCGGEPEDALPLGVG 62

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+HDD+  +D    RRG+ + ++ +    A++ G+ +   A  + ++  T  
Sbjct: 63  LEYIHAASLLHDDV--VDGAKKRRGRESANLIFGNEVAVLTGDYMYAKALHLFATHGTID 120

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              I S+ ++ +     L+       L    E I E + F I   KT  L       G +
Sbjct: 121 MIRIVSRAVMDMAEAQVLE-------LSRVGELITEEEYFQIIDGKTAVLFGACVSVGGL 173

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                +    RL   G  +G  FQL DDLLD   +  K
Sbjct: 174 AGGCDEE--GRLYEVGLRMGRAFQLIDDLLDYAGNSEK 209


>gi|166711277|ref|ZP_02242484.1| octaprenyl-diphosphate synthase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 332

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 15/222 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +D ++   L      +  Q  D ++SA      GGK++R  LV         +     
Sbjct: 25  AAVDALIRRRLASDVV-LINQIADHIISA------GGKRLRPMLVMLAGHAAGGSGPEHH 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +F+++  
Sbjct: 78  QLAAIIEFIHTSTLLHDDV--VDESDLRRGRSTANALWGNAPSVLVGDFLYSRSFQLMVE 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D +    +L+ T N   +G +  Q+L + +   DE     + + KT  L     
Sbjct: 136 L-----DRMEVMQILADTTNRIAEGEVL-QLLHVHNPDTDEAAYLRVIERKTAVLFAAGT 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA+ + A    +++L  +G  LG  FQ+ADD+LD   +  
Sbjct: 190 RLGALASGADAQVQQQLYDYGMQLGFAFQIADDVLDYAAEAA 231


>gi|257076044|ref|ZP_05570405.1| farnesyl pyrophosphate synthetase/
           geranyltransferase/farnesyltransferase/hexaprenyl
           [Ferroplasma acidarmanus fer1]
          Length = 330

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 18/218 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNHLTALRVGA 77
           ++++  +    ++T     L    +Y +  GGK+ R  L      +  N  + + L + +
Sbjct: 15  INEVNSRLLQAIKTDQP-YLFEMSKYTIDAGGKRFRPLLTILSYEISCNEPYDSILDLAS 73

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SLIHDD+  +D    RRG+ T+  +Y    AI+ G+ L   A+E+ S     
Sbjct: 74  GYELIHTASLIHDDI--IDKSKYRRGRETLASRYGIDNAIVVGDYLFAKAYELGSRYGK- 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACE 194
                    ++S     G   +  GQ+++  +     +D      I   KT        E
Sbjct: 131 ---------VVSKVMADGSSHLAEGQIIEALNIGNLSLDIETYNKIIMNKTAYFFSACAE 181

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              I A A  N +++L  F  N+G+ FQ+ DD+LD   
Sbjct: 182 GATIAAMAPDNVRDKLSKFAYNMGMAFQITDDILDIVG 219


>gi|259417470|ref|ZP_05741389.1| geranyltranstransferase [Silicibacter sp. TrichCH4B]
 gi|259346376|gb|EEW58190.1| geranyltranstransferase [Silicibacter sp. TrichCH4B]
          Length = 287

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 93/239 (38%), Positives = 132/239 (55%), Gaps = 19/239 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M  G  + L +   +I   ++  L QT         D L  A+ YAL GGK +R FLV E
Sbjct: 1   MTAGFTAALSQAQAKISIHMEHRLPQT---------DLLHQAMLYALRGGKMLRGFLVLE 51

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L +V    AL    AIECIH YSL+HDDLP MD+  +RRG+PT+H ++DE TA++AG
Sbjct: 52  SARLHDVPETAALEAALAIECIHAYSLVHDDLPCMDDDDLRRGQPTLHRKWDEATAVLAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQ 176
           + L T AFE+++  +          L+ ++    G  GM+ GQMLDI  E     +   Q
Sbjct: 112 DSLQTLAFELLAREEVGPHA---ISLIRTMAEAAGKDGMVSGQMLDIAAETAEAPLTLEQ 168

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +Q  KTG L+ ++  +GA +A A       LR + + LG+ FQ+ADD+LD E D  
Sbjct: 169 ITTLQARKTGCLIEWSACAGARLAGADP---APLRHYAQALGLAFQIADDILDIEGDAA 224


>gi|160888684|ref|ZP_02069687.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492]
 gi|156861998|gb|EDO55429.1| hypothetical protein BACUNI_01101 [Bacteroides uniformis ATCC 8492]
          Length = 324

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A LF       L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLFGKVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++AG+ LL  A   +   +     +I S L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLAGDYLLATALVQVGMTRNHDIIDIVSCLGQDLADGELL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT  L     ++GA+   AS  + E  R FGE +G+ FQ+ DD+ D
Sbjct: 157 LHFSEEVYFDVIRKKTAVLFAACTKAGALSVGASDEKAESARLFGEYIGLCFQIKDDIFD 216

Query: 230 CEE--DLPK 236
             E  ++ K
Sbjct: 217 YSESKEIGK 225


>gi|313472484|ref|ZP_07812976.1| polyprenyl synthetase family protein [Lactobacillus jensenii 1153]
 gi|313449165|gb|EEQ68919.2| polyprenyl synthetase family protein [Lactobacillus jensenii 1153]
          Length = 319

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 12/224 (5%)

Query: 11  ENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E    I   L  +  LL+   H   ++ +  L  +  A  GGK +R  LV   A      
Sbjct: 2   EKYPLIANELAQVNELLKQTMHAPNKNLESALKEM--ADNGGKYLRPSLVLLAAHAVGKT 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +   +++  AIE +H  +LIHDD+  +D+   RRGKP++   + +  A+ AG+ L T  F
Sbjct: 60  NKQIIQIATAIETLHMATLIHDDV--IDDSDKRRGKPSIQFAFGKDVAVYAGDLLFTNFF 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++          + +Q M        L G L GQM    +            K KT  L
Sbjct: 118 DLMLDVNEPEYLRLNAQTMR-----QILNGEL-GQMNQRFNLEQTFDDYLADIKGKTATL 171

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              A E GA  A  +  + + L  F E+LGI FQ+ DD+LD   
Sbjct: 172 FRLAAEEGAHFAGGNLEQTQILANFAEDLGIAFQIIDDILDYRG 215


>gi|29831407|ref|NP_826041.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29608522|dbj|BAC72576.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
           MA-4680]
          Length = 336

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++   + LL  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALEADVQAGLAAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++    A++ G
Sbjct: 65  AARFGDPYAPGLVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSANARWGNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A  I++    +                   + ++ GQ+L+     D        
Sbjct: 123 DFLFARASHILADLGPEAV----------RVQAEAFERLVTGQILETAGPMDGRDPVEHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTGAL+  AC  GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LEVLSGKTGALVAVACRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|147669014|ref|YP_001213832.1| polyprenyl synthetase [Dehalococcoides sp. BAV1]
 gi|289432282|ref|YP_003462155.1| trans-hexaprenyltranstransferase [Dehalococcoides sp. GT]
 gi|146269962|gb|ABQ16954.1| Polyprenyl synthetase [Dehalococcoides sp. BAV1]
 gi|288946002|gb|ADC73699.1| Trans-hexaprenyltranstransferase [Dehalococcoides sp. GT]
          Length = 324

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 16/237 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             + + + E  K ++   D+   +  S  + +    +   + Y L+GGK +R  L    A
Sbjct: 5   SSIYAPINEGLKGVE---DEF--KLVSESRKKSFPEMAEMLDYILVGGKVLRPALSMLSA 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       L +  + E +H  +L+HDD  ++D    RRG+ TV+  +    AI+ G+ 
Sbjct: 60  MCFGAGIKKVLPLATSSEMLHIATLVHDD--AIDKADTRRGRRTVNAVWGLEKAILLGDF 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L  +     ++       N+    + S T  I   G L  Q     +             
Sbjct: 118 LFAH-----AAETAAETGNMGIVTLFSQTLQIIASGELK-QAYASFNPDQSYENYLERIS 171

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            KT AL   A + GAI+A AS +++E +R +G NLG+ FQ+ DD+LD      D+ K
Sbjct: 172 GKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGK 228


>gi|242091495|ref|XP_002441580.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
 gi|241946865|gb|EES20010.1| hypothetical protein SORBIDRAFT_09g029730 [Sorghum bicolor]
          Length = 406

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 15/211 (7%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL------FNVNHLTALRVGAAIEC 81
             +    N  L+SA       GGK++R  LV   +         +       R+   IE 
Sbjct: 103 KSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAALSELTTEHQRLAEIIEM 162

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +   +   +++ +      
Sbjct: 163 IHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIK 220

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           + SQ++               Q   + D  +      +    KT +L+  +  S AI + 
Sbjct: 221 LISQVIKDFASGEI------KQASTLFDCDVTLDDYLLKSYYKTASLIAASTRSAAIFSG 274

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 275 MDTTICEQMYEYGRNLGLSFQVVDDILDFTQ 305


>gi|260910759|ref|ZP_05917413.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260635120|gb|EEX53156.1| octylprenyl diphosphate synthase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 325

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 12/222 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
           T L D +      + T  +  L  A+ +    GGK++R  L+      F      A    
Sbjct: 13  TELQDFIALFDKSL-THEDGLLGQALEHVRAKGGKRMRPILILLMTKSFGKVTPVAQYAA 71

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             +E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++ G+ +L+ A   I+    
Sbjct: 72  VGLELLHTASLVHDDV--VDESGERRGQASVNASYNNKVAVLVGDYILSTALLNIARTDD 129

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                  ++L  +L++   L      Q+ +I +    E   F + + KT AL       G
Sbjct: 130 CDIVCDLAELGRTLSNGEIL------QLTNIVNTNFSEEVYFEVIRQKTAALFESCAVIG 183

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
           A    A +   E  R FG N+GIIFQ+ DD+ D     DL K
Sbjct: 184 AKAGGADKQAVEAARAFGRNVGIIFQIRDDIFDYYQSADLGK 225


>gi|295835546|ref|ZP_06822479.1| polyprenyl synthetase [Streptomyces sp. SPB74]
 gi|197699439|gb|EDY46372.1| polyprenyl synthetase [Streptomyces sp. SPB74]
          Length = 385

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 90  GGKAVRPALALISAEVTGAGAETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 147

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T   +  R+   L+      + G       + +
Sbjct: 148 KVHGPAQAILVGDALFALANEVLLELGT--AEAGRATRRLTRATRALIDGQAQDISYEHR 205

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 206 DR-VTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLL 264

Query: 229 DCEED 233
               D
Sbjct: 265 GIWGD 269


>gi|325690177|gb|EGD32181.1| geranyltranstransferase [Streptococcus sanguinis SK115]
          Length = 291

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/220 (33%), Positives = 117/220 (53%), Gaps = 9/220 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN-HLTALRVGAAIEC 81
           L+    +   Q +  L   I Y++  GGK+IR  L+ E    F++       +V +A+E 
Sbjct: 12  LMIADFYKSQQVSSDLSEVILYSVQAGGKRIRPLLLLELIQAFDLELTEAHYQVASALEM 71

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    + +++    +L   
Sbjct: 72  IHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDPYGLLARA--ELPSQ 129

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIM 199
           ++  L+  L+   G  GM+ GQ+LD+Q E   I    +  I   KTG L+ +   +  ++
Sbjct: 130 VKVDLISELSLAAGSFGMVAGQVLDMQGEGQAISLEDLKTIHANKTGKLLTYPFVAAGLI 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           A      +++LR  GE LG+ FQ+ DD+LD     E+L K
Sbjct: 190 AEVEYFVQDKLRRIGELLGLAFQVRDDILDVTASFEELGK 229


>gi|254421801|ref|ZP_05035519.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335]
 gi|196189290|gb|EDX84254.1| solanesyl diphosphate synthase [Synechococcus sp. PCC 7335]
          Length = 323

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  LL     ++    +  L +A  +    GGK+IR  +V   A     +      
Sbjct: 11  VEADLA-LLTDNLKNLVGARHKILYAAAEHLFGAGGKRIRPAIVLLLARATQPDQGITGR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D    RRG  TVH ++    A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESSTRRGVDTVHSRFGNKVAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + S++++ L      QG+         D  +           KT  L+  
Sbjct: 128 ANLDNLEVVKLLSRVIMDLAEGEIRQGL------KHFDTTLTIDAYLEKSYYKTATLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++  +++  S +  E L  FG +LG+ +Q+ DD+LD   
Sbjct: 182 SAKAVGVLSEVSDHMAENLYQFGRSLGLAYQVVDDILDFTS 222


>gi|51209963|ref|YP_063627.1| prenyl transferase [Gracilaria tenuistipitata var. liui]
 gi|50657717|gb|AAT79702.1| prenyl transferase [Gracilaria tenuistipitata var. liui]
          Length = 323

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA----SLFNVNHLTALRVGA 77
           +L      M    +  L +A  +    GGK+IR  ++   A       ++      R+  
Sbjct: 17  ILENNLKRMVGAKHPILYAAAEHLFKAGGKRIRPTIILLVALSTTQALHILPE-HKRLAE 75

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SL+HDD+  +D   IRRG  TVH  +    A++AG+ L   +   +++    
Sbjct: 76  ITEIIHTASLVHDDV--IDECEIRRGVNTVHNAFSTKVAVLAGDFLFAQSSWYLANLNNL 133

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                 S+++         QG+         DE I           KT +L+  +C++ A
Sbjct: 134 EVVKTISKVITDFAEGEIRQGL------TCFDETISMNNYIEKSFYKTASLIASSCKAAA 187

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I++  + N + +   +G++LG+ FQ+ DD+LD   
Sbjct: 188 ILSDTTTNTQNQFYLYGKHLGLAFQIVDDILDIVG 222


>gi|283852797|ref|ZP_06370060.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B]
 gi|283571789|gb|EFC19786.1| Trans-hexaprenyltranstransferase [Desulfovibrio sp. FW1012B]
          Length = 322

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 13/227 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           S   +   R    +++ L   A+ +           +R+ LL GGK++R  L    A  F
Sbjct: 2   SDFADILSREVPAINEYLEDAAATLSPLVQP----VVRHVLLAGGKRLRPLLTVLVARAF 57

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +      +  ++E +H  +L+HDD+  +D   +RRG+ + H+++     I+AG+ LL 
Sbjct: 58  GHDKDDVYPLACSLEFLHSATLLHDDI--VDGAPLRRGRESAHVRFGATHTILAGDVLLA 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A  I++         I S+ +L       L      ++  ++D  +       I   KT
Sbjct: 116 LANRIVAEYDVPELTRILSEALLQTATGEIL------EIAHLRDTDLPLETYLSIITGKT 169

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             L+  AC  GAI+A A     +     G N GI FQL DD LD   
Sbjct: 170 AYLLQAACHCGAILAGADARLCQAAMSLGVNCGIAFQLVDDALDYTS 216


>gi|99082761|ref|YP_614915.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040]
 gi|99039041|gb|ABF65653.1| farnesyl-diphosphate synthase [Ruegeria sp. TM1040]
          Length = 287

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 91/239 (38%), Positives = 131/239 (54%), Gaps = 19/239 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M  G  + L +   +I   +D  L Q          D L  A+ YAL GGK +R FLV E
Sbjct: 1   MTAGFTAALLQAQTQILNHMDRRLPQ---------ADLLHQAMDYALRGGKMLRGFLVLE 51

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L +V    A+    AIECIH YSL+HDDLP+MD+  +RRG+PT+H ++DE TA++AG
Sbjct: 52  SARLHDVPETAAIEAALAIECIHAYSLVHDDLPAMDDDDLRRGQPTLHRKWDEATAVLAG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQ 176
           + L T AFE+++             L+ +L    G  GM+ GQM+DI  E     +   +
Sbjct: 112 DSLQTLAFELLARDSVGPNA---LSLIRTLAQAAGKDGMVSGQMMDIAAETAETPLTLDE 168

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +  +Q  KTG L+ ++  +GA +A A       LR + + LG+ FQ+ADD+LD E D  
Sbjct: 169 ITTLQARKTGCLIEWSACAGARLAGADP---APLRHYAQALGLAFQIADDILDVEGDAA 224


>gi|333023207|ref|ZP_08451271.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
 gi|332743059|gb|EGJ73500.1| putative polyprenyl diphosphate synthase [Streptomyces sp. Tu6071]
          Length = 377

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +   +  T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 81  GGKAVRPALALISAEVTGASAGTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T      R+   L+      + G       + +
Sbjct: 139 KVHGPAQAILVGDALFALANEILLELGTPEAG--RATRRLTRATRALIDGQAQDISYEHR 196

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 197 DR-VTVEECLEMEGNKTGALLACAASIGAVLGGADEATADTLERYGYHLGLAFQAVDDLL 255

Query: 229 DCEED 233
               D
Sbjct: 256 GIWGD 260


>gi|256752864|ref|ZP_05493702.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748241|gb|EEU61307.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 168

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 9/173 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
              KL+E  + ++  L  +L            + +  A+RY++  GGK++R  L      
Sbjct: 2   FKEKLREKQQLVEKELHRILDIEEK------PEIIYEAMRYSVFAGGKRLRPVLCLSSCE 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   AL V  AIE IH YSLIHDDLP+MDN  +RRGKPT H  Y E  AI+AG+GL
Sbjct: 56  LLGGDIKKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGL 115

Query: 124 LTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
           L   +E++     +  ++     +    +    G +G++GGQ++DI  +  + 
Sbjct: 116 LNLGYEVLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTEL 168


>gi|302344811|ref|YP_003813164.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
 gi|302149655|gb|ADK95917.1| polyprenyl synthetase [Prevotella melaninogenica ATCC 25845]
          Length = 326

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 13/228 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLT 71
            + I+T L D +    +H     +  L + + +     GK++R  L+   A  F      
Sbjct: 8   KQPIETELGDFI-DLFNHALDHEDGLLRTVLNHIKQRAGKRMRPILILLMAKNFGKVSEA 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                  +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+ +L+ A   +
Sbjct: 67  TQHAAVGLELLHTASLVHDDV--VDEAAARRGQASVNADYDNKVAVLVGDYVLSTALLHV 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S   +++     ++L  +L+    L      Q+ +IQ++ I E   + I + KT AL   
Sbjct: 125 SYTHSEIIVRYLAELGRTLSDGEIL------QLWNIQNKEITEEVYYKIIERKTAALFES 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
               GA  A+AS  E E  R FG++LGI+FQ+ DD+ D    E ++ K
Sbjct: 179 CAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIFDYYDSEAEIGK 226


>gi|71066129|ref|YP_264856.1| octaprenyl-diphosphate synthase [Psychrobacter arcticus 273-4]
 gi|71039114|gb|AAZ19422.1| probable octaprenyl-diphosphate synthase [Psychrobacter arcticus
           273-4]
          Length = 349

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +   CA +FN      A+ + A  E +H  +L+HDD+  +D    RRGK T
Sbjct: 66  AGGKRMRPLITLLCARMFNDEPSQQAMHLAAITEMLHTATLVHDDV--IDESGQRRGKAT 123

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +D  TA++ G+ L+  AF ++   ++     + S     +     L      Q+  
Sbjct: 124 ANATWDNATAVLVGDYLIARAFNLLVGFQSLPLLQVFSDGTCDIAEGEVL------QLQH 177

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +    E     I   KT  L   A +  AI+        + L  FG++ G  FQ+ DD
Sbjct: 178 QHNPEATEQDYLNIIDGKTSRLFMMATQGAAILQGQ-IQHLQALADFGQHFGNAFQIIDD 236

Query: 227 LLDCEEDLP 235
           +LD   D  
Sbjct: 237 VLDYSGDSE 245


>gi|206603458|gb|EDZ39938.1| Trans-hexaprenyltranstransferase [Leptospirillum sp. Group II
           '5-way CG']
          Length = 330

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 14/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTA--SHMQTQHNDRLLSAIRYAL-LGGKKIRSFL 57
           MN    + L+      +    DLL             ND +     + +  GGK++R  L
Sbjct: 1   MNPLSATGLKNVWADYEQ---DLLAVENCLIEFGGDTNDYIREVTSHIIQSGGKRLRPLL 57

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           +   + +   +      + A +E IH  +L+HDD+  +D+  +RRGK + +  +   TA+
Sbjct: 58  MIIASRISGYSGPHISLLSAVVEFIHTATLLHDDV--VDHAEMRRGKLSANQIWGNQTAV 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L   A  + +       ++  +     ++    L+ +L        +    E   
Sbjct: 116 LVGDYLYATALWMATGVHNHEINDTLTLACRKMSEGEVLELIL------DNNLSAREEDY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + + KT AL    C  GAI+  A   +K+ L  FG N+G+ FQ+ADD LD   
Sbjct: 170 LNVVECKTAALTAGTCRIGAILGGADPEKKKSLEDFGYNIGMSFQIADDALDYMA 224


>gi|83945354|ref|ZP_00957702.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851188|gb|EAP89045.1| polyprenyl synthetase family protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 351

 Score =  172 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 108/235 (45%), Gaps = 18/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +   ++   ++ ++++ +      +  Q  D L++A      GGK+IR  +    A +
Sbjct: 33  LATLASDDMAAVEAVIEERMASATRSIP-QTADYLVAA------GGKRIRPLITVTAARM 85

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + + AA+E IH  +L+HDD+  +D   +RRGK   +  +    +++ G+ L 
Sbjct: 86  LGYEGDGHVSLAAAVEYIHSATLLHDDV--VDESELRRGKAPANTVWGNAHSVLVGDFLF 143

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +F ++    +     + +  +LS   ++  +G +  Q+  +++  I   +   I   K
Sbjct: 144 ARSFMMMVDAGS-----MDALHVLSRAASVIAEGEVR-QLAAVRNIDISRDEYMSIIDAK 197

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T AL   A +   I+  + +  ++ L  +G  LG+ FQL DD LD      +L K
Sbjct: 198 TAALFSAAAQVAPILYGSDKAIEDGLETYGRELGLAFQLVDDALDYGGMAAELGK 252


>gi|71278749|ref|YP_267833.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
 gi|71144489|gb|AAZ24962.1| geranyltranstransferase [Colwellia psychrerythraea 34H]
          Length = 300

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 131/235 (55%), Gaps = 13/235 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
                 ++D L      + T ++ +L+ A+RY LL GGK++R +L        + +    
Sbjct: 8   AHYQERINDFLAAKLEGL-TINDPKLIEAMRYGLLIGGKRMRPYLAYITGEAVSADLNDI 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             V  A+ECIH YSL+HDDLP+MD+  +RRGKPT H  +DE TAI+AG+ L T AF+I++
Sbjct: 67  DAVAGALECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILA 126

Query: 133 SP-----KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKT 185
           +      ++     I+ +L+  L    G QGM GGQ LD+    + I   ++ ++  +KT
Sbjct: 127 NHTFSMNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKT 186

Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GAL+  +    A+ +   ++  K  L  + + +G+ +Q+ DD++D    EE+L K
Sbjct: 187 GALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGK 241


>gi|302876186|ref|YP_003844819.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
 gi|307686918|ref|ZP_07629364.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
 gi|302579043|gb|ADL53055.1| Polyprenyl synthetase [Clostridium cellulovorans 743B]
          Length = 795

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 15/245 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-------LLSAIRYALLG-GKK 52
           M   + ++ +E  +    I++ +  Q    +    +++       + +A  Y+L G GK+
Sbjct: 491 MVTNIKNEQKEK-EEFSDIIETVRKQVNESLDIPKDEKVSLMEDFISNAANYSLRGDGKR 549

Query: 53  IRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
           +R  +        + +     L +  ++E +H  SLI DDLP+ DN  IRRG+PTVH  Y
Sbjct: 550 LRPIMAWVMGVKEYGLKESEMLPLLRSLEYMHTASLIFDDLPAQDNADIRRGRPTVHKVY 609

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           +   A + G  L   A E         + ++R+ L L          +  GQ +D++ + 
Sbjct: 610 NVAIAELTGLFLTQKAIE---EQTFLQQFDLRNVLKLIRYSTETTADLCKGQTMDLEAKG 666

Query: 172 --IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +   Q+ M+   KTG     A    AI+A   Q E E L+ F  + GI FQ+ DDLLD
Sbjct: 667 KQLTLEQLNMMCFYKTGKGFEAALMMPAILAARDQVEMEALKKFSYHAGIAFQIKDDLLD 726

Query: 230 CEEDL 234
            E ++
Sbjct: 727 VEGEV 731


>gi|37520322|ref|NP_923699.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421]
 gi|35211315|dbj|BAC88694.1| solanesyl diphosphate synthase [Gloeobacter violaceus PCC 7421]
          Length = 325

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 11/228 (4%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVN 68
            S  ++  L  +     + + T+H     +A      GGK+IR  LV   +     +   
Sbjct: 9   WSALVEDDLSQMTRNLKNLLGTKHPVLYAAAEHLFNAGGKRIRPALVLLVSRATAAYGEP 68

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                R+    E IH  SL+HDD+  +D   +RRG  TV+ ++    A++AG+ L   A 
Sbjct: 69  TERHRRLAEITEMIHTASLVHDDV--IDTSAVRRGIDTVNSRFGNRVAVLAGDYLFGMAS 126

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             ++   +     +   ++        L      Q     D  +   Q       KT +L
Sbjct: 127 AYLARLGSLEVVELLGIVISHFGEGELL------QSTLQFDSDLTFEQYIDKSFYKTASL 180

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           M     + A+++ +     E L  +G +LGI FQ+ DDLLD      K
Sbjct: 181 MAGTSRAAAVLSESPAAVCEALYEYGRHLGIAFQVIDDLLDFTGSTAK 228


>gi|323465974|gb|ADX69661.1| Trans-hexaprenyltranstransferase [Lactobacillus helveticus H10]
          Length = 326

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 7/202 (3%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +QT H     + +  A  G K +R  L+   A +    +   + + ++IE +H  +LIHD
Sbjct: 28  IQTPHQSLQAALLTMADNGDKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHD 87

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D  ++D+  +RRG  ++  ++ +  A+ AG+ L T  F+++    T+ +  +R+   +S 
Sbjct: 88  D--TIDDSDLRRGNISIQAEFGKDVAVYAGDLLFTNFFDLMLDTTTEHEYLVRNAQTMSH 145

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                L G L GQM +  +     T      K KT AL   A E GA  A  +  +   L
Sbjct: 146 ----ILNGEL-GQMAERFNLEQTFTDYLNDIKGKTAALFRLAAEEGAHFAGGNAEQSTAL 200

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
             FGENLGI FQ+ DDLLD   
Sbjct: 201 ANFGENLGIAFQIVDDLLDYTG 222


>gi|254520331|ref|ZP_05132387.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA]
 gi|226914080|gb|EEH99281.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. 7_2_43FAA]
          Length = 321

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 13/221 (5%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
             + +D +  DL+ +       +  + ++  I     GGK +R   V   +     +   
Sbjct: 12  KRELVDVL--DLMKKNVKCKDKKIENSIIELIE---SGGKLLRPAFVLIGSKFGTNDTEK 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           ++   A IE +H  +L+HDD+  +D+  +RRG+ T+  +Y +  A+  G+ L    F+I+
Sbjct: 67  SIPTAAVIEMLHMATLVHDDV--IDDSKLRRGRETIQSKYGKDYAVYIGDYLFCVCFKIL 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++  +     +++  + S   +    G +  Q+       +           KT  L   
Sbjct: 125 ATSAS-----LQAIKVDSRAMSKICMGEVN-QLNSRFSMKLSVKDYLNRISGKTAELFSI 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   GA   +A     + L   G NLG+ FQ+ DD+LD E 
Sbjct: 179 SLYLGAAECNADDKVSKELGKIGHNLGMAFQIIDDILDYEG 219


>gi|284165809|ref|YP_003404088.1| dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511]
 gi|284015464|gb|ADB61415.1| Dimethylallyltranstransferase [Haloterrigena turkmenica DSM 5511]
          Length = 349

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 33/249 (13%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             +   ++E  +R++  + +        +  Q  +RL  A RY L  GGK++R  ++   
Sbjct: 9   EAVLEAVRERRERVNEAIPE-------ELPIQRPERLYEASRYLLDAGGKRLRPTVLLTV 61

Query: 62  ASL----------------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A                   N N +  +    ++E I  ++LIH     MD+  +RRG P
Sbjct: 62  AESLLDVEPLSTDYREFPTLNGNRIDIMDAAVSVEVIQSFTLIH--DDIMDDDDLRRGVP 119

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            VH +YD  TAI+AG+ L + AFEI+     +   ++ +  +L+ T       +  GQ L
Sbjct: 120 AVHKEYDLETAILAGDTLYSKAFEIMLETGAKPDRSVEALNVLATT----CTKICEGQSL 175

Query: 166 DIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  E    +   +   + + KT  L   +    AI+  A +   + L  +G ++G  FQ
Sbjct: 176 DVTFEERADVSPEEYLEMVEQKTAVLYAASACLPAILLGADEETIDALYGYGLDIGRAFQ 235

Query: 223 LADDLLDCE 231
           + DD+LD  
Sbjct: 236 IQDDVLDLT 244


>gi|302831696|ref|XP_002947413.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f.
           nagariensis]
 gi|300267277|gb|EFJ51461.1| hypothetical protein VOLCADRAFT_57046 [Volvox carteri f.
           nagariensis]
          Length = 389

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 14/230 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA------ 62
           L E    + + ++ +     + +  +H   + +A +    GGKK+R  +V   A      
Sbjct: 67  LNEILAPVKSDMEQMNQNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHSTAQR 126

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                      R+    E IH  SL+HDD+  +D   IRRGK T++  Y    A++AG+ 
Sbjct: 127 EGLTELTDKHRRLAEITEMIHTASLVHDDV--LDECDIRRGKKTINSMYGTRVAVLAGDF 184

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +   +++        + SQ++    +          Q   + D  I   Q      
Sbjct: 185 LFAQSSWFLANLDNLEVIKLISQVIADFANGEIS------QAASLFDTDITLEQYLDKSF 238

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  +C S A+ + +    KE +  +G++LG+ FQ+ DD+LD  +
Sbjct: 239 YKTASLIAASCRSAAVFSDSPVEVKEAMYSYGKHLGLAFQVVDDVLDFTQ 288


>gi|308080718|ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
 gi|148535925|gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
          Length = 343

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 13/223 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-------KKIRSFLVTECASLFNVNHL 70
           +++ D+  +  + M  Q  + +  A+RYA+L G       K+    L      L      
Sbjct: 47  SLIADVESELDAAMPMQPPESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRA 106

Query: 71  TALRVGAAIECIHCYSLI--HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            AL   AA+E +H  SL+  HDDLP  D    RRG+P+ H  Y    A++AG+ L   A+
Sbjct: 107 AALPAAAALEMLHAASLVLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAY 166

Query: 129 EIISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMK 184
             + S       +   +  +++  L   +G  GM  GQ LD+     + E +V  +   K
Sbjct: 167 THVISHTPSPDPVPHAVLLRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVMQVLTKK 226

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            G +   +   GA++  A  +E+  LR +G  +G++++L DD+
Sbjct: 227 FGEMAECSAACGAMLGGAGPDEEAELRRYGRTIGVLYELVDDI 269


>gi|295427978|ref|ZP_06820610.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|295128336|gb|EFG57970.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus EMRSA16]
          Length = 322

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 14  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 67  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 125 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 176 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 223


>gi|90580809|ref|ZP_01236612.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14]
 gi|90438077|gb|EAS63265.1| putative octaprenyl-diphosphate synthase [Vibrio angustum S14]
          Length = 323

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A IE IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLAVLAARALGYDGDKHTTAAAFIEFIHTATLLHDDV--VDESNMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + +  AI+A A    +   + +G  LG  FQL DD+L
Sbjct: 155 DPNTTEDSYMQVIYSKTARLFEASTQIAAIIADAPAEIELAFQEYGRYLGTAFQLIDDVL 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYIAD-GKE 222


>gi|255038819|ref|YP_003089440.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951575|gb|ACT96275.1| Polyprenyl synthetase [Dyadobacter fermentans DSM 18053]
          Length = 326

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 13/238 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           MN  L   ++E    I   +     +    M+++    L   + Y +   GK++R   V 
Sbjct: 1   MNMTLS--IKEIQAPIADEMKAFEQKFRQFMKSEVM-LLDQIMNYIVRRKGKQLRPMFVF 57

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +      +  R GA IE +H  +L+HDD+  +D+   RRG  +V+  +    A++ 
Sbjct: 58  LSAGVCGNISESTYRGGAMIELLHTATLVHDDV--VDDSNYRRGFFSVNALWKNKIAVLV 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL+    +     +   +  +   ++S       +G L  Q+   +   I+E   + 
Sbjct: 116 GDYLLSRGLLL-----SVDHEEFKILKIVSTAVRELSEGELL-QIEKARRLDINEEVYYE 169

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
           I + KT +L+   C  GA    A++   +++  FGE +G+ FQ+ DDL D  ED + K
Sbjct: 170 IIRQKTASLIASCCAVGASSVGAAKEVVDKMHAFGEKVGMAFQIKDDLFDYGEDEIGK 227


>gi|150026116|ref|YP_001296942.1| polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772657|emb|CAL44140.1| Polyprenyl synthetase [Flavobacterium psychrophilum JIP02/86]
          Length = 325

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 14/224 (6%)

Query: 19  ILDDL-LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASL--FNVNHLTAL 73
           IL+++ L +            LL+ I Y +    GK++R   V   A +           
Sbjct: 11  ILEEMELFEKKFQQSMSSKIALLNRITYYVVNRKGKQMRPMFVFLTAKMISGGTVLERTY 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R    IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S
Sbjct: 71  RGALVIELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG--LLLS 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D ++   ++S+      +G L  Q+   +   I E   + I + KT  L+   C
Sbjct: 127 IDNGDFDLLK---IISVAVREMSEGELL-QIEKARRLDITEAIYYEIIRQKTATLIAACC 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
             GA      + + E++R FGE +G+ FQ+ DDL D  ED + K
Sbjct: 183 ALGAQSVSNDEVQVEKMRKFGELIGMAFQIKDDLFDYTEDAIGK 226


>gi|288904840|ref|YP_003430062.1| farnesyl diphosphate synthase [Streptococcus gallolyticus UCN34]
 gi|288731566|emb|CBI13121.1| putative farnesyl diphosphate synthase [Streptococcus gallolyticus
           UCN34]
          Length = 289

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 77/237 (32%), Positives = 124/237 (52%), Gaps = 17/237 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN- 68
           +    I+  +     Q+        +  L+ AI Y++  GGK IR  +  E    F +  
Sbjct: 2   DKLNEINQAIRRYYAQSD-----VVSPELIEAILYSVEAGGKLIRPLIFLEILEGFGIEL 56

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++DE TAI+AG+ L    F
Sbjct: 57  TEGHFDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPF 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTG 186
            ++++    L  + +  L+  L+   G  GM+GGQMLD++ E   ++ +++ +I   KTG
Sbjct: 117 GLVANAA--LSADTKVCLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQLIHANKTG 174

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE------EDLPKK 237
            L+ F   +  I+A+ + ++ + LR  G  +G+ FQ+ DD+LD           PKK
Sbjct: 175 KLLTFPVVAAGIVANLAPDDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGKTPKK 231


>gi|332300739|ref|YP_004442660.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177802|gb|AEE13492.1| Polyprenyl synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 334

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 19/241 (7%)

Query: 1   MNGGLPSK-LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFL 57
           M+  L +K L+   + +   L  L+      +  +    L + IRY L   G K++R  L
Sbjct: 1   MSHSLEAKDLKACRQIVQDTLQSLM------LDKRTPQALYAPIRYTLEQEGAKRVRPVL 54

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                +        A     A+E  H ++L+HDD+  MDN  +RRGKP+V+ +Y    AI
Sbjct: 55  ALLMQAYLRPEAPLAASPIVALEVFHNFTLLHDDV--MDNSPVRRGKPSVYAKYGLTPAI 112

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDE 174
           ++G+ +L  A+++++   +        Q    +   I       GQ LD++ E   ++ +
Sbjct: 113 LSGDAMLILAYQMLTEGVSPEMLPDLIQNFNKMATLIM-----EGQQLDLEYEQLDYVSK 167

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            Q   +   KT  L+  A   GAI++  S  E E    FG NLG+ FQL DD LD   D 
Sbjct: 168 EQYLEMIGYKTAVLIATATRFGAILSKGSVTELESSYAFGWNLGLAFQLQDDYLDLYGDS 227

Query: 235 P 235
            
Sbjct: 228 E 228


>gi|318041258|ref|ZP_07973214.1| solanesyl diphosphate synthase [Synechococcus sp. CB0101]
          Length = 323

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGK++R  +V   +    
Sbjct: 2   ATVAELLQPVEADLEALLSDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLVSRALA 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +        R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  ADGELTARHRRLAEITEMIHTASLVHDDV--VDEASTRRGVDTVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFR------YDTGQSFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  +  +  +++    ++ + L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSARAAGVLSGLPAHQLDELYRFGRQLGLAFQVVDDILDFTG 222


>gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 157

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 7/159 (4%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H  SLI DDLP MDN  +RRGKPT H  + E  AI++G  LL  AFE ++     
Sbjct: 1   AVEMMHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVS 60

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----TQVFMIQKMKTGALMCFA 192
            K  +R+  +  L  +IG +G++ GQ  D+  E +++       +  I   KTG+L+  +
Sbjct: 61  SKKMVRA--VKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEAS 118

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              GA++   ++ E E++R F   +G++FQ+ DD+LD  
Sbjct: 119 AVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDVT 157


>gi|167647338|ref|YP_001685001.1| polyprenyl synthetase [Caulobacter sp. K31]
 gi|167349768|gb|ABZ72503.1| Polyprenyl synthetase [Caulobacter sp. K31]
          Length = 322

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           + MQ++       A      GGK++R  L    A L   ++   L++ AA+E IH  +L+
Sbjct: 21  ARMQSEVPVIPALAEHLIAAGGKRLRPLLTVATARLAGSDNAACLKLAAAVEFIHTATLL 80

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D   +RRGK   H+ +    +++ G+ L   AFE++    +     +R+  +L
Sbjct: 81  HDDV--VDGSQLRRGKVAAHLIWGAAQSVLVGDFLFARAFELMVETSS-----MRALEIL 133

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           +    +  +G +  Q+    D  + +     I   KT  L   A E+G + A  S ++ E
Sbjct: 134 AKASRVIAEGEVL-QLTRSHDLNLSQALYLEIIAAKTAELFAAASEAGGVSAGVSADKSE 192

Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
            LR +G NLG+ FQLADD LD   
Sbjct: 193 ALRAYGMNLGLAFQLADDALDYGG 216


>gi|297591052|ref|ZP_06949690.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus MN8]
 gi|297575938|gb|EFH94654.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus MN8]
          Length = 332

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 24  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 77  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 135 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 185

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 186 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 233


>gi|118580423|ref|YP_901673.1| trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379]
 gi|118503133|gb|ABK99615.1| Trans-hexaprenyltranstransferase [Pelobacter propionicus DSM 2379]
          Length = 322

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 13/232 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           +Q     I   L  +  Q  + +++     +     Y L  GGK++R  L+   A L + 
Sbjct: 1   MQAALNIIGDDLKRVEQQFRTDLESDVP-LIRKVGEYVLSSGGKRVRPALLLLAARLCDY 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               A+ + + IE IH  +L+HDD+  +D+  +RRG  + +  +    +++ G+ L + +
Sbjct: 60  QGDKAVPLASVIEFIHTATLLHDDV--VDSATLRRGLASANTLWGNEASVLVGDFLFSKS 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++ +  +     +    +LS    +  +G +  Q+L   +  + E +   + + KT  
Sbjct: 118 FSLMVAVGS-----LDILKVLSDATTVIAEGEVM-QLLCTGELELTEERYIDVVRSKTAI 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           LM  ACE+GAI+  A+   ++ L  FG NLGI FQL DD LD    EE+  K
Sbjct: 172 LMSAACEAGAILGGAAPERRQALSDFGMNLGIAFQLMDDTLDYIATEEEFGK 223


>gi|302383413|ref|YP_003819236.1| polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302194041|gb|ADL01613.1| Polyprenyl synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 346

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 15/227 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
               ++D    D L+             L   I     GGK++R  L    A     +  
Sbjct: 24  ARLAKVDMAAVDALILDRMQSSVPVIPLLAEHI--VSAGGKRLRPLLTIAAARSATADRP 81

Query: 71  TA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            A     L++ A++E IH  +L+HDD+  +D    RRGK   H+ +   T+++ G+ L  
Sbjct: 82  DADLTAALKLAASVEFIHTATLLHDDV--VDGSERRRGKVAAHLIWGSATSVLVGDFLFA 139

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AFE++        D IR+  +L+   ++  QG +  Q+    D  +D+     I   KT
Sbjct: 140 RAFELMVET-----DQIRALGILAQASSVIAQGEVL-QLTRAHDLNLDQETYLRIISAKT 193

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             L   A ESGA+   A       LR +G NLG+ FQLADD LD   
Sbjct: 194 AELFAAAAESGAVGVGADPKTTSALRSYGLNLGLAFQLADDALDYGG 240


>gi|317123859|ref|YP_004097971.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043]
 gi|315587947|gb|ADU47244.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043]
          Length = 336

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 26/239 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVT 59
              L + LQ+   R+D +L  ++          H D  ++A    L   GGK+ R  L  
Sbjct: 16  TPELMAHLQDGLARVDALLRTVV---------DHEDPFIAAASSHLAQAGGKRFRPLLTL 66

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L        +R  A +E  H  SL HDD+  MD   +RRG P+ +  YD  TAI+ 
Sbjct: 67  LSAELGEGVTDDVVRAAAGVELTHLASLYHDDV--MDEAEVRRGVPSANAVYDNSTAILV 124

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQV 177
           G+ L   A E+I+    +            L        +  GQ+ D +     +D    
Sbjct: 125 GDLLFGKASELIAGLGAEAV----------LIQAQTFVRLCSGQIRDDRPCPPDVDPIDY 174

Query: 178 FM-IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++ +   KTG+L   AC  GA+ +  S    E +R +GE +G+ FQLADDL+D   D  
Sbjct: 175 YLGVLADKTGSLTATACRYGAMFSGGSPELVETMRSYGEKVGMTFQLADDLIDIASDSE 233


>gi|49483657|ref|YP_040881.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|257425534|ref|ZP_05601959.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257428193|ref|ZP_05604591.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257430823|ref|ZP_05607205.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257433581|ref|ZP_05609939.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257436423|ref|ZP_05612470.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus M876]
 gi|282904051|ref|ZP_06311939.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905816|ref|ZP_06313671.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282908786|ref|ZP_06316604.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282911047|ref|ZP_06318849.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282914259|ref|ZP_06322046.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus M899]
 gi|282924366|ref|ZP_06332040.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus C101]
 gi|283958233|ref|ZP_06375684.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293501285|ref|ZP_06667136.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510246|ref|ZP_06668954.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus M809]
 gi|293526841|ref|ZP_06671525.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus M1015]
 gi|49241786|emb|CAG40477.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257271991|gb|EEV04129.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257275034|gb|EEV06521.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257278951|gb|EEV09570.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257281674|gb|EEV11811.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257284705|gb|EEV14825.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus M876]
 gi|282313753|gb|EFB44146.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus C101]
 gi|282322327|gb|EFB52651.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus M899]
 gi|282324742|gb|EFB55052.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327050|gb|EFB57345.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282331108|gb|EFB60622.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282595669|gb|EFC00633.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus C160]
 gi|283790382|gb|EFC29199.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290920399|gb|EFD97463.1| heptaprenyl diphosphate synthase, component II [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291096290|gb|EFE26551.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291467190|gb|EFF09708.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus M809]
          Length = 319

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|163841369|ref|YP_001625774.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC
           33209]
 gi|162954845|gb|ABY24360.1| farnesyl pyrophosphate synthetase [Renibacterium salmoninarum ATCC
           33209]
          Length = 375

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 22/224 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           N  +++  L + +  +   +    +  L+ A      GGK+IR  LV   A L + +   
Sbjct: 64  NLAKVEKQLREAIANSDP-LADATSRHLIEA------GGKRIRPLLVLLAAHLGDSSRPE 116

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +R    +E  H  +L HDD+  MD+   RRG PT H  +    AI+ G+ +   A  ++
Sbjct: 117 VIRAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAILTGDLIFARASILV 174

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGAL 188
           S          R+  + + T       +  GQ+ +      DE        +   KTG+L
Sbjct: 175 SELGP------RALGIQARTFE----RLCLGQLHETVGPRPDEDPVDHYISVVSDKTGSL 224

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  + + GAI A   +  ++ L  +GE +G+ FQLADD++D   
Sbjct: 225 VSASGQLGAIFAEVPEPIQDVLVEYGEKVGVAFQLADDVIDVTG 268


>gi|186477401|ref|YP_001858871.1| polyprenyl synthetase [Burkholderia phymatum STM815]
 gi|184193860|gb|ACC71825.1| Polyprenyl synthetase [Burkholderia phymatum STM815]
          Length = 330

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + E+ ++++ ++   L      +  Q ++ ++SA      GGK++R  L+   A
Sbjct: 12  ANLLAPIAEDMQQVNRVIRHRLASEVM-LINQISEYIISA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGDRTGYRHELAAVVEFIHTATLLHDDV--VDESDLRRGRQTANALFGNAASVLVGDF 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +F+++          +R   +LS   NI  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFQMMVGVG-----KMRVMEILSEATNIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A + GA+++ A    +     FG  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAAQLGAVLSGADATTEAAAAEFGRRIGTAFQIMDDWLDYTG 226


>gi|313675607|ref|YP_004053603.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126]
 gi|312942305|gb|ADR21495.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126]
          Length = 326

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 17/229 (7%)

Query: 17  DTILDDLLLQTASHMQTQH----NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
           +  + + ++   S ++ +        L   IRY + LGGK++R  L      L+  N   
Sbjct: 2   NQSIKEYIVSINSAIEQEDFGDKPQELYEPIRYIMSLGGKRMRPLLSLLSYQLYKDNIKE 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE-I 130
            +    A+E  H ++L+HDD+  MDN  +RRG+ TVH +++   AI++G+ +L  A++ +
Sbjct: 62  VIPASIAVEIFHNFTLMHDDI--MDNAPLRRGQQTVHEKWNSPVAILSGDVMLVKAYQQL 119

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA 187
           I++  T+    I  +       N     +  GQ +D+  E    + E     + ++KT  
Sbjct: 120 IANSPTEKLTEILEKF------NRCAIEVCEGQQIDMNFEEQEQVQEADYIEMIRLKTAV 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+ F+ E G I+A  ++ ++  L   G N GI FQL DDLLD   D  K
Sbjct: 174 LLGFSLEFGGILAMDNEADQALLYQMGVNAGIGFQLMDDLLDVYADQDK 222


>gi|220924250|ref|YP_002499552.1| polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
 gi|219948857|gb|ACL59249.1| Polyprenyl synthetase [Methylobacterium nodulans ORS 2060]
          Length = 345

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 13/232 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            + L +    ++T ++ +     S   +        A      GGK++R  L    A L 
Sbjct: 15  EASLNDLVALVETGMERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPILTLATAQLC 74

Query: 66  NVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                       +++ A++E +H  +L+HDD+  +D   +RRG+    I++    +++ G
Sbjct: 75  GYRSAEGGRDGDVKLAASVEFMHTATLLHDDV--VDESDMRRGRVAARIKWGNQASVLVG 132

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL  AF+++    +     +R+  +LS    +  +G +  Q+   ++    E +   +
Sbjct: 133 DFLLGQAFKMMVEVGS-----LRALDILSSAAAVIAEGEVM-QLGAAKNTETTEDEYLAV 186

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + KT  L   ACE G ++A   ++E    R +G NLGI FQL DD LD   
Sbjct: 187 IRAKTAELFAAACEVGPVLAERPKSEAAACRSYGMNLGIAFQLVDDALDYGG 238


>gi|282919182|ref|ZP_06326917.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus C427]
 gi|282316992|gb|EFB47366.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus C427]
          Length = 319

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|332702907|ref|ZP_08422995.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553056|gb|EGJ50100.1| Trans-hexaprenyltranstransferase [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 334

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +++    I+    D L +    +         +A      GGK++R  L   CA  
Sbjct: 16  LAAYIEQQLPAIN----DFLARETDKLDPLVRP---AAAHVLAAGGKRLRPVLAILCARA 68

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     +  ++E +H  +L+HDD+  +D   +RRGK   HI +    A++AG+ LL
Sbjct: 69  LGHKGEAIYPLACSLEFLHSATLLHDDI--LDGAVLRRGKAAAHIVFSRTEAVLAGDVLL 126

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A ++++S       + R    LS      + G +  ++++ ++          I   K
Sbjct: 127 ALANQLVASYG-----DPRLTTCLSEAIMRTVAGEVA-EIVNTREMDSSLETYLHIITGK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L+  +C  GA++A  S    +    FG N+GI FQ+ DD +D   
Sbjct: 181 TAYLLEASCVVGALLAGVSDELIKAASVFGLNMGIAFQIVDDAMDYTS 228


>gi|87160661|ref|YP_494056.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195203|ref|YP_500004.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|269203095|ref|YP_003282364.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|87126635|gb|ABD21149.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202761|gb|ABD30571.1| heptaprenyl diphosphate syntase component II, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|262075385|gb|ACY11358.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|302751300|gb|ADL65477.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
          Length = 314

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 6   KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 58

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 59  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 117 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 167

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 168 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 215


>gi|15606228|ref|NP_213606.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5]
 gi|2983415|gb|AAC06998.1| octoprenyl-diphosphate synthase [Aquifex aeolicus VF5]
          Length = 304

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 27/232 (11%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E  K I+  L + L              +L   RY +  GGK++R       + +   + 
Sbjct: 2   EILKAIEDRLVEELNPKVR--------LVLETGRYIVESGGKRLRPLFTLLVSGMCGGDP 53

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             AL +G A+E IH  SL+HDD+  +D    RRG+ + ++ +    A++ G+ +   +  
Sbjct: 54  SKALPLGVALEYIHVASLLHDDV--VDRAKTRRGRESANLVFGNGVAVLTGDYMYAKSLH 111

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGA 187
           + S+        + S +++          M  GQ+L+I    + I E + F I   KTG 
Sbjct: 112 LFSTYGNMEMIRLVSGVVMD---------MAEGQVLEISKVGDIISEEEYFQIIDGKTGV 162

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           L       GA+           L   G  LG  FQL DD LD E D   L K
Sbjct: 163 LFGACFGVGAMSGECGD--WRELYEAGLRLGRAFQLIDDALDYEGDPKVLGK 212


>gi|254497873|ref|ZP_05110638.1| geranyltranstransferase [Legionella drancourtii LLAP12]
 gi|254352871|gb|EET11641.1| geranyltranstransferase [Legionella drancourtii LLAP12]
          Length = 294

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 11/225 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KR + +L+ ++ +++   Q     ++  A+ Y+L  GGK+IR  LV     L +V+    
Sbjct: 7   KRHEHVLEQIINESSVPAQ-----QIHLAMNYSLFPGGKRIRPILVYLTGHLIDVDPQVL 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             + AA+E  HCYSLIHDDLP+MD+  +RRGKP+ H  +DE TAI+ G+G+   A E++ 
Sbjct: 62  DVIAAAVELTHCYSLIHDDLPAMDDDDLRRGKPSCHKAFDEATAILVGDGMQALAIEVLL 121

Query: 133 SPKTQLKDNIRSQLML-SLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGAL 188
           +  + L   ++   +   L    G+ GM+ GQ LD+ +     I E Q+  I  +KTG L
Sbjct: 122 THLSPLVHPVQVIAITQELVKASGISGMVSGQSLDLSELAKSSITEEQLREIHHLKTGRL 181

Query: 189 MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +    E         S+  K  LR +  ++G++FQ+ DD LD   
Sbjct: 182 ISACIEMVLAAKDTVSEQTKAALRTYASHIGLVFQMQDDYLDHYA 226


>gi|315195366|gb|EFU25753.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus CGS00]
          Length = 319

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKYSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|329731320|gb|EGG67686.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 319

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|151221591|ref|YP_001332413.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|294848433|ref|ZP_06789179.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754]
 gi|295407219|ref|ZP_06817019.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819]
 gi|297244643|ref|ZP_06928526.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796]
 gi|150374391|dbj|BAF67651.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|294824459|gb|EFG40882.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9754]
 gi|294967932|gb|EFG43961.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8819]
 gi|297178673|gb|EFH37919.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A8796]
          Length = 322

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 14  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 67  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 125 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 176 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 223


>gi|293572766|ref|ZP_06683720.1| polyprenyl synthetase [Enterococcus faecium E980]
 gi|291607116|gb|EFF36484.1| polyprenyl synthetase [Enterococcus faecium E980]
          Length = 328

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  +L E  KR++        +T           +   I     GGK +R       + 
Sbjct: 12  ALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFSQ 60

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ + A+IE +H  +LIHDD+  +D   +RRG+P +  Q+  V ++ AG+ 
Sbjct: 61  FGPEQDRDKAIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L    F+++S   T LK    S  + S +    L G L GQM D  +  +   +      
Sbjct: 119 LFVCCFKLLSDYSTSLK----SLQLNSRSMEKVLNGEL-GQMDDRYNYELSVKEYLENIS 173

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            KT  L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD     +++ K
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGK 230


>gi|288801789|ref|ZP_06407231.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18]
 gi|288335831|gb|EFC74264.1| octaprenyl-diphosphate synthase [Prevotella melaninogenica D18]
          Length = 326

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 13/228 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLT 71
            + I+T L D +    +H     +  L + + +     GK++R  L+   A  F      
Sbjct: 8   KQPIETELGDFI-DLFNHALDHEDGLLRTVLNHIKQQAGKRMRPILILLMAKNFGKVSEA 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                  +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+ +L+ A   +
Sbjct: 67  TQHAAVGLELLHTASLVHDDV--VDEAAARRGQASVNADYDNKVAVLVGDYVLSTALLHV 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S   +++     ++L  +L+    L      Q+ +IQ++ I E   + I + KT AL   
Sbjct: 125 SYTHSEIIVRYLAELGRTLSDGEIL------QLWNIQNKEITEEVYYKIIERKTAALFES 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
               GA  A+AS  E E  R FG++LGI+FQ+ DD+ D    E ++ K
Sbjct: 179 CAAIGAESANASDEEVEAARLFGKHLGIVFQIRDDIFDYYDSEAEIGK 226


>gi|227552808|ref|ZP_03982857.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium
           TX1330]
 gi|257897275|ref|ZP_05676928.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12]
 gi|293378986|ref|ZP_06625141.1| polyprenyl synthetase [Enterococcus faecium PC4.1]
 gi|227178051|gb|EEI59023.1| possible trans-hexaprenyltranstransferase [Enterococcus faecium
           TX1330]
 gi|257833840|gb|EEV60261.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com12]
 gi|292642527|gb|EFF60682.1| polyprenyl synthetase [Enterococcus faecium PC4.1]
          Length = 328

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  +L E  KR++        +T           +   I     GGK +R       + 
Sbjct: 12  ALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFSQ 60

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ + A+IE +H  +LIHDD+  +D   +RRG+P +  Q+  V ++ AG+ 
Sbjct: 61  FGPEQDRDKAIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L    F+++S   T LK    S  + S +    L G L GQM D  +  +   +      
Sbjct: 119 LFVCCFKLLSDYSTSLK----SLQLNSRSMEKVLNGEL-GQMDDRYNYELSVKEYLENIS 173

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            KT  L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD     +++ K
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGK 230


>gi|297207871|ref|ZP_06924304.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300911956|ref|ZP_07129399.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|296887445|gb|EFH26345.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886202|gb|EFK81404.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 332

 Score =  171 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 24  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 77  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 135 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 185

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 186 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 233


>gi|167564177|ref|ZP_02357093.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis EO147]
 gi|167571298|ref|ZP_02364172.1| octaprenyl-diphosphate synthase [Burkholderia oklahomensis C6786]
          Length = 330

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 12  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + +
Sbjct: 123 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 226


>gi|21283088|ref|NP_646176.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49486309|ref|YP_043530.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MSSA476]
 gi|21204528|dbj|BAB95224.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49244752|emb|CAG43188.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MSSA476]
          Length = 319

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|290891826|ref|ZP_06554823.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071]
 gi|290558420|gb|EFD91937.1| polyprenyl synthetase [Listeria monocytogenes FSL J2-071]
          Length = 326

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+    + +     H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIE----ENIQIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
             KT  L   +C SGA  + A++    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 173 SGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|124008499|ref|ZP_01693192.1| polyprenyl synthetase [Microscilla marina ATCC 23134]
 gi|123986007|gb|EAY25857.1| polyprenyl synthetase [Microscilla marina ATCC 23134]
          Length = 324

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           +++    I  ++ +   +  S M++     L   + Y +   GK++R   V   A     
Sbjct: 5   IKDIQAPIQDVMANFEGKFRSFMKSDVF-LLDKIMNYIVKRKGKQMRPMFVFLSAGTGGE 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +  A R  A IE +H  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+  
Sbjct: 64  INEMAYRGAALIELLHTATLVHDDV--VDDSNYRRGFFSINALWKNKIAVLVGDYLLSRG 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             ++ S   +  + ++   ++S       +G L  Q+   +   I E   + I + KT +
Sbjct: 122 --LLLSIDNEDFEQLK---IVSNAVREMSEGELL-QIAKARRLDITEEVYYDIIRQKTAS 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
           L+   C  GA  A  ++ +    R FGE +G+ FQ+ DDL D    ++ K
Sbjct: 176 LIASCCAVGASAAGLNKEQISMFREFGEKVGMAFQIKDDLFDYGTAEIGK 225


>gi|15618657|ref|NP_224943.1| geranyl transtransferase [Chlamydophila pneumoniae CWL029]
 gi|15836281|ref|NP_300805.1| geranyl transtransferase [Chlamydophila pneumoniae J138]
 gi|16752293|ref|NP_445662.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila
           pneumoniae AR39]
 gi|33242107|ref|NP_877048.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae
           TW-183]
 gi|4377054|gb|AAD18886.1| Geranyl Transtransferase [Chlamydophila pneumoniae CWL029]
 gi|7190037|gb|AAF38891.1| geranylgeranyl pyrophosphate synthase, putative [Chlamydophila
           pneumoniae AR39]
 gi|8979121|dbj|BAA98956.1| geranyl transtransferase [Chlamydophila pneumoniae J138]
 gi|33236617|gb|AAP98705.1| geranylgeranyl pyrophosphate synthase [Chlamydophila pneumoniae
           TW-183]
 gi|269302537|gb|ACZ32637.1| polyprenyl synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 289

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 16/235 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           L      I++ ++  L          H   + S + YAL GG K++R  LV   A    +
Sbjct: 5   LDTYRPSIESAIEKAL---EGFGPIGHP--IRSPVEYALQGGGKRLRPGLVCMMAQGLGL 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           NH   +    A+E +H  +LI DDLP MDN   RRG+PTVH  +DE TA++A   L+  A
Sbjct: 60  NHD-VMDSALAVEFVHTSTLIADDLPCMDNDDERRGRPTVHKAFDEATALLASYALIPAA 118

Query: 128 FEIISSPKTQLKD--------NIRSQLMLSLT-HNIGLQGMLGGQMLDIQDEFIDETQVF 178
           +  +     +LK+        +I   ++  +T  NIG  G+LGGQ  D+      +  V 
Sbjct: 119 YSHLRLNAKKLKEQGCDPREIDIAYNIIGDITDKNIGCSGVLGGQYDDMFFSNRGQEHVQ 178

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I   KTG+L   AC SG +           +  F  N G++FQ+ DD  D ++D
Sbjct: 179 SIMIKKTGSLFEIACISGWLFGGGDPQFAPIITSFSNNFGLLFQIKDDFSDLQKD 233


>gi|22329620|ref|NP_173148.2| SPS2 (Solanesyl diphosphate synthase 2);
           trans-octaprenyltranstransferase [Arabidopsis thaliana]
 gi|34327936|dbj|BAC82428.1| solanesyl diphosphate synthase [Arabidopsis thaliana]
 gi|57999785|dbj|BAD88534.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana]
 gi|114213509|gb|ABI54337.1| At1g17050 [Arabidopsis thaliana]
 gi|332191414|gb|AEE29535.1| solanesyl diphosphate synthase 2 [Arabidopsis thaliana]
          Length = 417

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L      +    N  L+SA       GGK++R  LV       A L  + 
Sbjct: 99  FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLK 158

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+G  IE IH  SLIHDD+  +D   +RRG+ TVH  +    A++AG+ +   
Sbjct: 159 ELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRRGRETVHELFGTRVAVLAGDFMFAQ 216

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   +++ +      + SQ++               Q   + D  +      +    KT 
Sbjct: 217 ASWYLANLENLEVIKLISQVIKDFASGEI------KQASSLFDCDVKLDDYMLKSYYKTA 270

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +       E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 271 SLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQ 316


>gi|254516949|ref|ZP_05129007.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3]
 gi|219674454|gb|EED30822.1| octaprenyl-diphosphate synthase [gamma proteobacterium NOR5-3]
          Length = 320

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 10/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           +Q+    +   LD +       +++   D + +  +Y +  GGK++R  LV   ++    
Sbjct: 1   MQQVRAVVSAELDAVNAVIIEQLRSDV-DMVENVGQYIVDAGGKRLRPVLVLLSSAALGP 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                +   A +E IH  +L+HDD+  +D   +RRG+PT +  +    +++ G+ L T A
Sbjct: 60  ISDAQIHFAAVVEFIHTATLLHDDV--VDVSELRRGRPTANSAFGNAPSVLVGDFLYTRA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+++ +             M++ T N    G +  Q++   D    E Q + +   KT A
Sbjct: 118 FQLMVALGNHD-----VLKMMADTTNTIAAGEVL-QLIRAGDAATSEEQYYDVIDRKTAA 171

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L    CE  A++A A     E+LR  G ++GI FQL DDLLD E D
Sbjct: 172 LFAAGCEGAALLAGADAARVEQLRVCGRSIGIAFQLIDDLLDYEGD 217


>gi|257888791|ref|ZP_05668444.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733]
 gi|257824845|gb|EEV51777.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,141,733]
          Length = 328

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  +L E  KR++        +T           +   I     GGK +R       + 
Sbjct: 12  ALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFSQ 60

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ + A+IE +H  +LIHDD+  +D   +RRG+P +  Q+  V ++ AG+ 
Sbjct: 61  FGPEQDRDKAIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L    F+++S   T LK    S  + S +    L G L GQM D  +  +   +      
Sbjct: 119 LFVCCFKLLSDYSTSLK----SLQLNSRSMEKVLNGEL-GQMDDRYNYELSVKEYLENIS 173

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            KT  L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD     +++ K
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGK 230


>gi|223940506|ref|ZP_03632355.1| Polyprenyl synthetase [bacterium Ellin514]
 gi|223890830|gb|EEF57342.1| Polyprenyl synthetase [bacterium Ellin514]
          Length = 350

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 12/236 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYALLG-GKKIRSF 56
           + G    +     K I   ++  L   A  ++ Q    +  ++    YAL G GK++R  
Sbjct: 13  VTGASQKETHATWKHIAEPVEPFLEAVAQRLEKQVREFDPAIVPYAEYALTGQGKQLRPA 72

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           LV   A+     + + + +   IE +H  +L+HDD+  MD   IRRG+ T+   +    A
Sbjct: 73  LVALSANASGTLNDSHVTIAVIIEMVHLATLVHDDV--MDEAEIRRGRLTLAANWGNEIA 130

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L  +A ++ +S  T       +     +  N    G +  Q    ++    + +
Sbjct: 131 VLFGDCLFAHALKLAASFPTPEICRAVA-----MATNTVCSGEIL-QTQQRRNFQFSQPE 184

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            F + +MKT  L   +C+ GA +  A   ++  LR FG  LG  +QL DD LD   
Sbjct: 185 YFKVLEMKTAELFALSCDLGACLTGAPAVQRNGLRQFGMALGTAYQLYDDCLDLFG 240


>gi|74100792|gb|AAZ99640.1| isoprenyl diphosphate synthase [Streptomyces mycarofaciens]
          Length = 336

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++   + LL  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALEADVQAGLVAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++    A++ G
Sbjct: 65  SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEASVRRGVPSANTRWGNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A +I++    +                +  + ++ GQ+L+    QD        
Sbjct: 123 DFLFARASQILADLGPEAV----------RVQALAFERLVTGQILETAGPQDGRDPVDHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|329956361|ref|ZP_08296958.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
 gi|328524258|gb|EGF51328.1| polyprenyl synthetase [Bacteroides clarus YIT 12056]
          Length = 324

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+N      L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLYNEICPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  A   +   +     ++ S L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLTGDYLLATALVEVGMTRNYAIIDVVSNLGQDLAEGELL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT  L     ++GA+   AS  + E  R FGE +G+ FQ+ DD+ D
Sbjct: 157 PEYSEDIYFDVIRKKTAVLFAACMKAGALSVGASDEKAEYARLFGEYIGLCFQIKDDIFD 216

Query: 230 CEE--DLPK 236
             E  ++ K
Sbjct: 217 YYESKEIGK 225


>gi|258592999|emb|CBE69310.1| Polyprenyl synthetase [NC10 bacterium 'Dutch sediment']
          Length = 325

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPS 94
           + +   IRY L  GGK++R  L+   A L   N     + +    E +H  +LIHDD+  
Sbjct: 30  ELISEIIRYVLKSGGKRVRPALLLLSAKLCGYNGGSRHIDLAVVAEYMHAATLIHDDI-- 87

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D    RRG P+ +  +    +++AG+ L   + +++                +      
Sbjct: 88  IDRADKRRGLPSANSTWGSQISVLAGDFLYARSLQMLVIDGDLA---------VMRAFAD 138

Query: 155 GLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               M+ GQ+ ++Q   +  +   +   I   KT AL+  AC +GA++A     E   L 
Sbjct: 139 ATVRMIEGQVREVQMAGNLDLTYDEYLDIITSKTAALISVACRTGALIAGRQPEEVAALT 198

Query: 212 CFGENLGIIFQLADDLLD--CEED-LPK 236
            FG ++GI FQL DD LD   EED L K
Sbjct: 199 EFGLDVGIAFQLVDDALDFVAEEDRLGK 226


>gi|227821037|ref|YP_002825007.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234]
 gi|227340036|gb|ACP24254.1| octaprenyl-diphosphate synthase [Sinorhizobium fredii NGR234]
          Length = 338

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASMFGYEGDAHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSTAASVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A AS+ ++  L+ +G NLG+ FQL DD+L
Sbjct: 169 NMETTEDDYLQVIRAKTAALFAAAAEVGPIVASASRADRNALKSYGMNLGLAFQLVDDVL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGSSSDLGK 239


>gi|330448814|ref|ZP_08312461.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328493005|dbj|GAA06958.1| octaprenyl-diphosphate synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 323

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 9/189 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A     +        A +E IH  +L+HDD+  +D   +RRGK T +
Sbjct: 43  GGKRLRPMLAVLAARALGYDGEKHTTAAAFVEFIHTATLLHDDV--VDESDMRRGKETAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ + T +F++++S ++     ++   ++S   N+  +G +  Q+++  
Sbjct: 101 AAFGNAASVLVGDYIYTRSFQMMTSLRS-----LKILDIMSEATNVIAEGEVL-QLMNCN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   + +  AI+A A    +   + +G  LG  FQL DD+L
Sbjct: 155 DPDTTEDSYMQVIYSKTARLFEASTQIAAIIADAPAEIELAFQEYGRYLGTAFQLIDDVL 214

Query: 229 DCEEDLPKK 237
           D   D  K+
Sbjct: 215 DYIAD-GKE 222


>gi|253733283|ref|ZP_04867448.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|304380947|ref|ZP_07363606.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|253728823|gb|EES97552.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|304340533|gb|EFM06468.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|320140359|gb|EFW32215.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142714|gb|EFW34517.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 332

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 24  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 77  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 135 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 185

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 186 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 233


>gi|188996355|ref|YP_001930606.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931422|gb|ACD66052.1| Polyprenyl synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 317

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 15/192 (7%)

Query: 49  GGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R +LV + +  + N N      + AA+E +H  SL+HDD+  +D   +RRGKPT 
Sbjct: 35  GGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEYLHTASLLHDDV--VDGSQLRRGKPTA 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           +  +   T ++ G+ L   A  + S           SQ +         + M  GQ+L+ 
Sbjct: 93  NRIFGNDTTVLTGDYLYANALYLFSIHGNIDMIKNVSQTV---------KKMAEGQLLEL 143

Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             I D  I   + + I + KT AL    C  G  +   ++  K++   +G N+G+ FQ+ 
Sbjct: 144 KKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQKAFEYGLNIGMAFQIV 203

Query: 225 DDLLDCEEDLPK 236
           DDLLD      K
Sbjct: 204 DDLLDYTGKEEK 215


>gi|158422531|ref|YP_001523823.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571]
 gi|158329420|dbj|BAF86905.1| farnesyltranstransferase [Azorhizobium caulinodans ORS 571]
          Length = 335

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA+L +      +++ A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 54  GGKRLRPMLTIACAALSSYEGDGHIKLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++          +    +LS       +G +  Q+   +
Sbjct: 112 KLWGNEASVLVGDFLLGQAFKMMVEVGI-----LECLDILSTAACTIAEGEVM-QLAAAK 165

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT  L   ACE GA++    + E+   R FG NLGI FQL DD L
Sbjct: 166 NTETSEDDYLAVIRGKTAELFAAACEVGAVLNARPKAEQAACRSFGMNLGIAFQLVDDAL 225

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 226 DYGGSQAK 233


>gi|4836881|gb|AAD30584.1|AC007260_15 Very similar to prenyltransferases [Arabidopsis thaliana]
          Length = 390

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 15/216 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLT--ALRVG 76
           L      +    N  L+SA       GGK++R  LV       A L  +  LT    R+ 
Sbjct: 82  LNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLA 141

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE IH  SLIHDD+  +D   +RRGK TVH  +    A++AG+ +   A   +++ + 
Sbjct: 142 EIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLEN 199

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                + SQ++               Q   + D      +  +    KT +L+  + +  
Sbjct: 200 LEVIKLISQVIKDFASGEI------KQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGA 253

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AI +    +  E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 254 AIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQ 289


>gi|15924460|ref|NP_371994.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|15927051|ref|NP_374584.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus N315]
 gi|57650425|ref|YP_186354.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|148267954|ref|YP_001246897.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394018|ref|YP_001316693.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979789|ref|YP_001442048.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|161509637|ref|YP_001575296.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|221140963|ref|ZP_03565456.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253315977|ref|ZP_04839190.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|255006256|ref|ZP_05144857.2| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus Mu50-omega]
 gi|257795475|ref|ZP_05644454.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9781]
 gi|258413283|ref|ZP_05681559.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9763]
 gi|258420610|ref|ZP_05683552.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9719]
 gi|258426805|ref|ZP_05688025.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9299]
 gi|258444803|ref|ZP_05693132.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A8115]
 gi|258447363|ref|ZP_05695507.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A6300]
 gi|258449752|ref|ZP_05697853.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A6224]
 gi|258451128|ref|ZP_05699163.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A5948]
 gi|258454578|ref|ZP_05702542.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A5937]
 gi|282892966|ref|ZP_06301201.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
           A8117]
 gi|282921716|ref|ZP_06329433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765]
 gi|282927997|ref|ZP_06335606.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102]
 gi|284024468|ref|ZP_06378866.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus 132]
 gi|296275333|ref|ZP_06857840.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus MR1]
 gi|13701269|dbj|BAB42563.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus N315]
 gi|14247241|dbj|BAB57632.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|57284611|gb|AAW36705.1| polyprenyl synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|147741023|gb|ABQ49321.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946470|gb|ABR52406.1| Polyprenyl synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721924|dbj|BAF78341.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|160368446|gb|ABX29417.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|257789447|gb|EEV27787.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9781]
 gi|257839847|gb|EEV64315.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9763]
 gi|257843558|gb|EEV67965.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9719]
 gi|257849966|gb|EEV73924.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9299]
 gi|257850296|gb|EEV74249.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A8115]
 gi|257853554|gb|EEV76513.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A6300]
 gi|257857000|gb|EEV79900.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A6224]
 gi|257861183|gb|EEV83996.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A5948]
 gi|257862961|gb|EEV85725.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A5937]
 gi|269940961|emb|CBI49345.1| putative heptaprenyl diphosphate synthasecomponent II
           [Staphylococcus aureus subsp. aureus TW20]
 gi|282590294|gb|EFB95374.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A10102]
 gi|282593978|gb|EFB98967.1| trans-hexaprenyltranstransferase [Staphylococcus aureus A9765]
 gi|282764963|gb|EFC05088.1| trans-hexaprenyltranstransferase subunit II [Staphylococcus aureus
           A8117]
 gi|285817150|gb|ADC37637.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus 04-02981]
 gi|312829860|emb|CBX34702.1| heptaprenyl diphosphate synthase component 2 (HEPPPsynthase subunit
           2) (Spore germination protein C3) [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129185|gb|EFT85180.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|315197784|gb|EFU28118.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|329314146|gb|AEB88559.1| Heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus subsp. aureus T0131]
 gi|329723204|gb|EGG59735.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus 21189]
 gi|329727672|gb|EGG64128.1| putative heptaprenyl diphosphate synthase component II
           [Staphylococcus aureus subsp. aureus 21172]
          Length = 319

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|258422499|ref|ZP_05685407.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9635]
 gi|257847256|gb|EEV71262.1| heptaprenyl diphosphate synthase component II [Staphylococcus
           aureus A9635]
          Length = 319

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +     +     
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDDQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|254439465|ref|ZP_05052959.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
 gi|198254911|gb|EDY79225.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
          Length = 299

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 87/237 (36%), Positives = 129/237 (54%), Gaps = 17/237 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L   L+  ++ ++T ++  +    + +          A+ YA+ GGK +R FLV E
Sbjct: 11  MADALKDALKHAAQIVETTIEAAVRPVETVVP--------DAMMYAVRGGKALRGFLVLE 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L  V    A  +  AIE +H YSLIHDDLP MD+  +RRGKPTVH ++D  TA++ G
Sbjct: 63  GARLHGVEERIAAPIAGAIEAMHAYSLIHDDLPCMDDDDVRRGKPTVHRKWDAATAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQ 176
           + L   AFE+I S   + +  +    ML    + G +GM+GGQ  DI  E  D      +
Sbjct: 123 DALQALAFELIMSADIKPEAKVVLAHML--AIDAGERGMVGGQAADIAAETADAPLTLRE 180

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +Q  KTGAL+ +AC +G  +A A +     +R +G+ LG  FQ+ADD+LD   D
Sbjct: 181 IESLQAKKTGALIEWACAAGPRIAGADE---MPMRHYGQALGRAFQIADDILDVTGD 234


>gi|126463556|ref|YP_001044670.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|332559609|ref|ZP_08413931.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N]
 gi|126105220|gb|ABN77898.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029]
 gi|332277321|gb|EGJ22636.1| polyprenyl synthetase [Rhodobacter sphaeroides WS8N]
          Length = 289

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 91/237 (38%), Positives = 136/237 (57%), Gaps = 15/237 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
                L + + R+   LD  L         + +  ++ A+RYA+ GGK++R FLV E A 
Sbjct: 2   SFSKALTDAAARVQARLDAALAD-------REDLPVVHAMRYAVQGGKRLRGFLVLESAR 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  +    A+   A+IE +H YSL+HDD+P MD+  +RRG PTVH ++DE TA++AG+ L
Sbjct: 55  LHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179
            T AFE+++ P       +R +L+ SL    G +GM+ GQ LDI  E     +   Q+  
Sbjct: 115 QTLAFELLADPALG-PAEVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITH 173

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +Q  KTGAL+ ++ E+GAI+  A    +  LR +   LG+ FQ+ADD+LD E D  K
Sbjct: 174 LQAGKTGALIRWSAEAGAILGQAD---RVPLRRYATALGLAFQIADDILDVEGDAEK 227


>gi|322392008|ref|ZP_08065471.1| geranyltranstransferase [Streptococcus peroris ATCC 700780]
 gi|321145106|gb|EFX40504.1| geranyltranstransferase [Streptococcus peroris ATCC 700780]
          Length = 291

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 128/234 (54%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ ++        +   Q +  L  A+ Y++  GGK+IR +L+ E      V 
Sbjct: 4   QEKLTLVESAIEKF------YGDKQVSSSLREAVLYSVHAGGKRIRPYLLLEVLESLQVP 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L    
Sbjct: 58  ITIAHAQVAAALEMIHTGSLIHDDLPAMDDDDFRRGRLTNHKKFGEALAILAGDALFFDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           + +I+     L + I+  L+ SL+ + G  GM+ GQ+LD++ E   ++  ++  I   KT
Sbjct: 118 YALIAQA--DLPNEIKIDLIASLSLSSGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ +  ++ AI+A  +   + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAYPFQAAAIIAELTPELQAKLKTVGELVGLAFQVRDDVLDVTASFEEIGK 229


>gi|145327729|ref|NP_001077840.1| SPS1 (solanesyl diphosphate synthase 1);
           trans-octaprenyltranstransferase [Arabidopsis thaliana]
 gi|332197994|gb|AEE36115.1| solanesyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 367

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 15/216 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVNHLT--ALRVG 76
           L      +    N  L+SA       GGK++R  LV       A L  +  LT    R+ 
Sbjct: 59  LNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLA 118

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE IH  SLIHDD+  +D   +RRGK TVH  +    A++AG+ +   A   +++ + 
Sbjct: 119 EIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLEN 176

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                + SQ++               Q   + D      +  +    KT +L+  + +  
Sbjct: 177 LEVIKLISQVIKDFASGEI------KQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGA 230

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AI +    +  E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 231 AIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQ 266


>gi|325286900|ref|YP_004262690.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489]
 gi|324322354|gb|ADY29819.1| Trans-hexaprenyltranstransferase [Cellulophaga lytica DSM 7489]
          Length = 325

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 13/216 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +   H        LL+ I Y +    GK++R   V   A L      +    R  + I
Sbjct: 17  LFEKKFHASMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLVSGGKVNERTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +V+  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDV--VDDSNKRRGFFSVNALWKNKIAVLVGDFLLSKG--LLLSIDNGDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D ++   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLLK---IISVAVREMSEGELL-QIEKARKLDITEDVYYEIIRQKTATLIAACCSLGACS 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +   ++ E  R FGE +G+ FQ+ DDL D   D  
Sbjct: 189 VNPDSDDVETFRKFGELIGMAFQIKDDLFDY-GDEA 223


>gi|298372664|ref|ZP_06982654.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275568|gb|EFI17119.1| octylprenyl diphosphate synthase [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 323

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 11/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
            +E  K I   L     + +     + ++ L +A++Y +   GK+IR  LV   A L   
Sbjct: 4   FEEGKKVISNELKIFNDKFSLSFFAE-DELLHNALQYLMPQKGKQIRPILVILGAKLCGE 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  + AA E +H  SLIHDD+  +DN   RR KP+++  +D  T+++ G+ L+T +
Sbjct: 63  VTDDTYLIAAAYELLHSASLIHDDV--IDNSLQRRNKPSLNKIFDNKTSVLVGDYLMTKS 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F  I          +    +L       ++G L  Q          E + + + K KT A
Sbjct: 121 FNYI-----YHTYKMEQIGLLQKLSIDIIRGELLQQ--QYSHSIPKEKEYYSVIKNKTAA 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L     ++GA+ A+ +  + + +   GENLG+ FQ+ DD+ D   
Sbjct: 174 LFATCLQAGALSANGTTQQLDDMYSIGENLGMCFQIKDDIFDYSA 218


>gi|300088362|ref|YP_003758884.1| polyprenyl synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528095|gb|ADJ26563.1| Polyprenyl synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 324

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 11/206 (5%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +    L   +R+ L GGK +R  L        + +    L +  A E +H  +L+HDD  
Sbjct: 31  EEFPELHDMLRHILTGGKVLRPALTFLAGRCIDESTDRILNMATANELLHISTLVHDD-- 88

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           ++D+   RRG  TV+  +    AI+ G+ L   A E  ++      DN+R+  M S T  
Sbjct: 89  AIDHAATRRGHQTVNNVWGLEKAILLGDFLFARAGEYAAAT-----DNLRTVKMFSNTLQ 143

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
               G L  Q  D+          F     KT +L+  + ESGA++   ++ + + L  F
Sbjct: 144 TIAVGELR-QAKDVFSPAQSREGYFKRIAGKTASLLKMSTESGAVLGSGTEEQIQALADF 202

Query: 214 GENLGIIFQLADDLLDCEE---DLPK 236
           G NLG+ FQ+ DD+LD      +L K
Sbjct: 203 GWNLGMAFQIVDDILDFTGTEAELGK 228


>gi|124516584|gb|EAY58092.1| trans-hexaprenyltranstransferase [Leptospirillum rubarum]
          Length = 330

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 14/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYAL-LGGKKIRSFL 57
           MN    + L+      +    DLL      ++     ND +     + +  GGK++R  L
Sbjct: 1   MNPLSATGLKNVWADYEQ---DLLAVENCLIEYGGDTNDYIREVTSHIIQSGGKRLRPLL 57

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           +   + +   +      + A +E IH  +L+HDD+  +D+  +RRGK + +  +   TA+
Sbjct: 58  MIIASRISGYSGPHISLLSAVVEFIHTATLLHDDV--VDHAEMRRGKLSANQIWGNQTAV 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L   A  + +       ++  +     ++    L+ +L        +    E   
Sbjct: 116 LVGDYLYATALWMATGVHNHEINDTLTLACRKMSEGEVLELIL------DNNLSAREEDY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + + KT AL    C  GAI+  A   +K+ L  FG N+G+ FQ+ADD LD   
Sbjct: 170 LSVVECKTAALTAGTCRIGAILGGADTEKKKALEDFGYNIGMSFQIADDALDYMA 224


>gi|206900678|ref|YP_002251005.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
           [Dictyoglomus thermophilum H-6-12]
 gi|206739781|gb|ACI18839.1| geranylgeranyl pyrophosphate synthetase (ggpp synthetase) (ggps)
           [Dictyoglomus thermophilum H-6-12]
          Length = 343

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 16/236 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL-LSAIRYALLGGKKIRSFLVTECAS 63
           + +KLQEN  +  T +   L+ TA HM     D + ++ IR     GK++R         
Sbjct: 13  IENKLQENWSKFSTNIPIHLI-TAYHMGWVDEDLIPITNIRR----GKRLRPLFCVLVNQ 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N     AL +G+AIE +H +SL+HDD+   D    R GK TV   + E  AI  G+ L
Sbjct: 68  TLNGVLDDALEIGSAIEFLHNFSLVHDDIQ--DQDEKRHGKWTVWKIWGEAQAINVGDLL 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMI 180
               F+++++ K+ L  +   + +           ++ GQ LDI  E    I   +  M+
Sbjct: 126 FNMVFQVLTNLKSPLLLSKSLKELTETIRE-----LIEGQYLDISFEKRKDISLKEYLMM 180

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KT  L   +   GA  A   +   +  +  G N G+ FQ+ADD +    D  K
Sbjct: 181 IDKKTAKLFSTSFYLGAFSATYKEEISKLFQDIGRNFGLFFQIADDAMGIWGDPEK 236


>gi|163753001|ref|ZP_02160125.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1]
 gi|161326733|gb|EDP98058.1| octaprenyl-diphosphate synthase [Kordia algicida OT-1]
          Length = 325

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 14/220 (6%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVGAA 78
           +L  +  S+  T     L     Y +   GK++R   V   + +    + +    R  + 
Sbjct: 16  ELFEKKFSNSMTSKVALLNRITHYIVNRKGKQMRPMFVFLVSKMVSDGLVNDRTYRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S     
Sbjct: 76  IELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSIDNGD 131

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            D ++   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA 
Sbjct: 132 FDLLK---IISVAVREMSEGELL-QIEKARKLDITEDVYYEIIRQKTATLIAACCAMGAK 187

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
             +AS  E E LR FGE +G+ FQ+ DDL D   D  + K
Sbjct: 188 SVNASDEEVENLRLFGEYIGMAFQIKDDLFDY-GDTQIGK 226


>gi|328877029|gb|EGG25392.1| trans-prenyltransferase [Dictyostelium fasciculatum]
          Length = 485

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 20/237 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASH---MQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + S LQ+ +  I   + + L   +S    +Q  H   +  +  Y  L GK+IR  ++   
Sbjct: 159 VDSDLQKLTNNIVEHIKNHLSGNSSIGSGLQKPHPILVSISSYYFQLKGKRIRPTIILLL 218

Query: 62  ASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           +              + +++   +E IH  +L+HDD+  +D    RR  P+V+  +    
Sbjct: 219 SRCLLQQKNITEPIASQIKLAEIVEMIHTATLVHDDV--IDEATTRRDVPSVNKSFSNKL 276

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           +I+ G+ LL  A  ++S  +      + S  +           ++ G+ + ++       
Sbjct: 277 SILCGDYLLARASVLLSQLRNPDVSELISTSLAD---------LVEGEFMQVKSNESSFE 327

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           Q      +KT +L+  +C++ A++     +       FG+NLG+ FQL DDLLD   
Sbjct: 328 QYLRKTYLKTASLISNSCKATALLGGEDAHTANLAFEFGKNLGLAFQLIDDLLDYTS 384


>gi|311745674|ref|ZP_07719459.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1]
 gi|126575112|gb|EAZ79462.1| octaprenyl-diphosphate synthase [Algoriphagus sp. PR1]
          Length = 324

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 108/234 (46%), Gaps = 11/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           + + L++    I + + +  L+    M+++    L   + Y +   GK++R   V   A 
Sbjct: 1   MKADLKQIQVPIASEMTEFELKFRGLMKSKV-KLLDHIMNYIVKRKGKQMRPMFVFLTAG 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +    + +  R  A IE +H  +L+HDD+  +D+   RRG  +V+  +    A++ G+ L
Sbjct: 60  VCGEINESTHRGAALIELLHTATLVHDDV--VDDANYRRGFFSVNALWKNKIAVLVGDYL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L+    +     +    + +   ++S       +G L  Q+   +   I E   + I + 
Sbjct: 118 LSRGLLL-----SVDNGDFKLLQIVSNAVKEMSEGELL-QIAKARKLDITEEVYYQIIRQ 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
           KT +L+   C  GA     +     +++ FGE +G+ FQ+ DDL D  EE++ K
Sbjct: 172 KTASLIASCCAVGASSVEGNIEVVSKMQEFGEKVGMAFQIKDDLFDYGEEEIGK 225


>gi|76809882|ref|YP_334895.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b]
 gi|167721317|ref|ZP_02404553.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei DM98]
 gi|167740286|ref|ZP_02413060.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 14]
 gi|167817505|ref|ZP_02449185.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 91]
 gi|167825907|ref|ZP_02457378.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 9]
 gi|167847393|ref|ZP_02472901.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei B7210]
 gi|167895981|ref|ZP_02483383.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 7894]
 gi|167904366|ref|ZP_02491571.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei NCTC
           13177]
 gi|167912626|ref|ZP_02499717.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 112]
 gi|167920573|ref|ZP_02507664.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei BCC215]
 gi|254258017|ref|ZP_04949071.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a]
 gi|254299344|ref|ZP_04966794.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e]
 gi|76579335|gb|ABA48810.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710b]
 gi|157809083|gb|EDO86253.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 406e]
 gi|254216706|gb|EET06090.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1710a]
          Length = 330

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 12  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 226


>gi|47093810|ref|ZP_00231556.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858]
 gi|254824998|ref|ZP_05229999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854153|ref|ZP_05243501.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503]
 gi|254991862|ref|ZP_05274052.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes FSL J2-064]
 gi|255519631|ref|ZP_05386868.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes FSL J1-175]
 gi|300763608|ref|ZP_07073606.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017]
 gi|47017807|gb|EAL08594.1| polyprenyl synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258607545|gb|EEW20153.1| polyprenyl synthetase [Listeria monocytogenes FSL R2-503]
 gi|293594238|gb|EFG01999.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515885|gb|EFK42934.1| polyprenyl synthetase [Listeria monocytogenes FSL N1-017]
          Length = 326

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+  +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIEKNI----QIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
             KT  L   +C SGA  + A++    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 173 SGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|326693827|ref|ZP_08230832.1| geranylgeranyl pyrophosphate synthase [Leuconostoc argentinum KCTC
           3773]
          Length = 299

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 19/222 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN-VNHLTALRVGA 77
           +D  L Q    + T  + +    + YA+L GGK++R  L     S F       AL++  
Sbjct: 15  IDAQLAQDLKQITT--DAQFSEMMAYAVLNGGKRLRPLLTLAVISSFQQATTPQALKLAT 72

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H YSL+HDDLP+MDN  +RRG+P+VH ++ E  AI+ G+ LLT AFE++++    
Sbjct: 73  AVEWVHSYSLVHDDLPAMDNDLLRRGQPSVHAKFGEAAAILVGDALLTGAFEVVTTANAL 132

Query: 138 LKDNIR------SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFMIQKMKTG 186
             D  +        ++  L H  G  GM+ GQM D+ +   +        +  I   KT 
Sbjct: 133 APDETKIPDQTIVTIVQDLAHFSGAAGMVIGQMHDMGNHGQNLQTETDWLLQEIYTPKTA 192

Query: 187 ALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLA 224
           AL+ FA + GA +A   Q +     + +  FG + G+ FQ+ 
Sbjct: 193 ALIQFAAKLGAQLATLQQTQVPEATQAMTQFGLDFGLAFQIQ 234


>gi|82751067|ref|YP_416808.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           RF122]
 gi|82656598|emb|CAI81021.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           RF122]
          Length = 319

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|86606912|ref|YP_475675.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
 gi|86555454|gb|ABD00412.1| solanesyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
          Length = 323

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 11/220 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TA 72
           ++  L+ L    +  +  +H    ++A      GGK IR  +V   A     +       
Sbjct: 11  VEADLERLRQNLSRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPQH 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D   +RRG  TV+  +D   A++AG+ L   A   ++
Sbjct: 71  WRLAEITEMIHTASLVHDDV--IDTADVRRGIDTVNTLFDNRVAVLAGDYLFGQAAWYLA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +        + S++++ L            Q L   D  +   +       KT +L+  +
Sbjct: 129 NLDNLEVVKLLSKVIMDLPEGEV------RQSLTRFDPDVSLEEYLAKSFYKTASLISGS 182

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++  +++  S    +RL  FG +LGI FQ+ DDLLD   
Sbjct: 183 SKAAGLLSGVSPEVADRLFDFGRDLGIAFQIVDDLLDFTA 222


>gi|32474678|ref|NP_867672.1| polyprenyl synthase [Rhodopirellula baltica SH 1]
 gi|32445217|emb|CAD75219.1| polyprenyl synthase [Rhodopirellula baltica SH 1]
          Length = 397

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 24/247 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
             G  S L+     I   L  +  +    +Q+++ + L+  +R+   LGGK++R  L+  
Sbjct: 57  TSGEVSPLRSIYAPIVESLAAVDARLHRELQSRY-EALVPVLRHGTQLGGKRLRPALLLL 115

Query: 61  CASLFNVNH--------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
             +  + +                  + +   +E +H  +LIHDD+  +D    RR  PT
Sbjct: 116 SGAAMHADRTSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDV--LDKAATRRHVPT 173

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++ ++++ T+I+ G+ L   +F + ++  + L   +  Q    +            Q+L 
Sbjct: 174 INARWNDDTSILLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEGE------LRQVLG 227

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                IDE     I + KT  L   +C+ GA ++   +++ E    FG +LGI FQ+ADD
Sbjct: 228 RDWLDIDEETYLDIIRGKTAELTRVSCQIGADLSGGDESQVEAFARFGNDLGIAFQIADD 287

Query: 227 LLDCEED 233
            LD   D
Sbjct: 288 FLDLWGD 294


>gi|217966160|ref|YP_002351838.1| polyprenyl synthetase [Listeria monocytogenes HCC23]
 gi|217335430|gb|ACK41224.1| polyprenyl synthetase [Listeria monocytogenes HCC23]
 gi|307572230|emb|CAR85409.1| polyprenyl synthase, component II [Listeria monocytogenes L99]
          Length = 326

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+  +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIEKNI----QIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
             KT  L   +C SGA  + A++    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 173 SGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|222478679|ref|YP_002564916.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451581|gb|ACM55846.1| Polyprenyl synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 280

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 25/230 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECAS 63
           L  ++     R++ ++D++             D L   + +  L GGK++R  +      
Sbjct: 4   LERRVALAEDRLEAVIDEV-----------EPDELSEEVGHVVLAGGKRVRPAVTILACE 52

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F+ +   A+   A IE +H  SL+ DD+  +D   +RRG P+   +Y    AIIA +GL
Sbjct: 53  AFDGDPDAAVDFAAGIEFVHNASLVIDDI--IDRSEVRRGTPSAWAEYGYGPAIIASDGL 110

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L  AF + S+    ++           T    L  +  G+  ++      E +   + + 
Sbjct: 111 LGEAFALFSADPRAMR-----------TVAEALVELGEGEATELAARPTTEAEYMELARR 159

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL   A E GAI   A  +  +    + E +G+ FQ+ DD+LD   D
Sbjct: 160 KTGALFRAAAELGAIAGGADSHAVDSFGEYAERVGVAFQMRDDVLDATAD 209


>gi|54298645|ref|YP_125014.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris]
 gi|53752430|emb|CAH13862.1| hypothetical protein lpp2709 [Legionella pneumophila str. Paris]
          Length = 322

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +  ++     +         +L+ T +    G +  Q+ +  
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMVEVGIKE-----ILNLLANTSHQITCGEVK-QLANRH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +     F + + KT  L   A   G I+ +A    ++ L  +G +LG  FQL DD L
Sbjct: 155 NPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRDSLYNYGLHLGNAFQLIDDAL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYCSDAA 221


>gi|282916736|ref|ZP_06324494.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus D139]
 gi|283770541|ref|ZP_06343433.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus H19]
 gi|282319223|gb|EFB49575.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus D139]
 gi|283460688|gb|EFC07778.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus H19]
          Length = 319

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDKQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|46908813|ref|YP_015202.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226225186|ref|YP_002759293.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes Clip81459]
 gi|254931090|ref|ZP_05264449.1| polyprenyl synthetase [Listeria monocytogenes HPB2262]
 gi|46882086|gb|AAT05379.1| polyprenyl synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225877648|emb|CAS06362.1| Putative heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293582635|gb|EFF94667.1| polyprenyl synthetase [Listeria monocytogenes HPB2262]
 gi|328469814|gb|EGF40731.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes 220]
 gi|332313071|gb|EGJ26166.1| Polyprenyl synthetase [Listeria monocytogenes str. Scott A]
          Length = 326

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+  +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIEKNI----QIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
             KT  L   +C SGA  + A++    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 173 SGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|289549205|ref|YP_003474193.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
 gi|289182822|gb|ADC90066.1| Geranyltranstransferase [Thermocrinis albus DSM 14484]
          Length = 300

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 16/217 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           + L ++ +         +L    Y A  GGK++R  L+ E A +   +    + +   IE
Sbjct: 5   EQLERSITEFLMPEVKTVLEIGNYIASAGGKRVRPILMLETARMLGGDTERLIPLAVGIE 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D   +RRG+P+ +  +     ++ G+ +   A  + S        
Sbjct: 65  YIHMASLLHDDV--VDGADVRRGRPSANRVFGNPIVVLTGDYMYARALWLYSLYGNMKSI 122

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            I S+          +  M  GQ+L+     + IDE     I   KTGAL   +   GA+
Sbjct: 123 EIVSR---------AVMQMAEGQVLELLHIGKIIDEETYLRIVDGKTGALFGASMGVGAL 173

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           M+       E     G  +G  FQ+ DD LD   D  
Sbjct: 174 MSGYPG--FEEFYRMGVKVGRAFQMVDDALDYIGDQK 208


>gi|53802938|ref|YP_115384.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str.
           Bath]
 gi|53756699|gb|AAU90990.1| octaprenyl-diphosphate synthase [Methylococcus capsulatus str.
           Bath]
          Length = 340

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A          + + A IE IH  +L+HDD+  +D   +RRG+ + +
Sbjct: 61  GGKRLRPMLHLLSAKALGYPGDHHITLAAVIEFIHTATLLHDDV--VDESALRRGQDSAN 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++   +     ++R   +LS T     +G +  Q+L+  
Sbjct: 119 ALWGNSASVLVGDYLYSRSFELMVRVQ-----DMRVMDILSRTTTAIAEGEVL-QLLNCN 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   DE +   +   KT  L   A +  A++A +S   +E L+ +G  LGI FQL DD+L
Sbjct: 173 NPATDEGRYLDVISRKTAILFSAAAQLAAVLAGSSHAVEESLKNYGTYLGIAFQLKDDVL 232

Query: 229 DCEED 233
           D + D
Sbjct: 233 DYKAD 237


>gi|67866738|gb|AAY82368.1| decaprenyl diphosphate synthase [Agrobacterium tumefaciens]
          Length = 358

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 77  GGKRLRPMLTLASASMFGYEGDHHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 134

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   +
Sbjct: 135 TIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSTAASVIAEGEVL-QLSVAK 188

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 189 NMETTEDDYLQVIRAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 248

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 249 DYGGKSADLGK 259


>gi|69248976|ref|ZP_00604834.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO]
 gi|257880389|ref|ZP_05660042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933]
 gi|257882385|ref|ZP_05662038.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502]
 gi|257886155|ref|ZP_05665808.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501]
 gi|257891717|ref|ZP_05671370.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410]
 gi|257894056|ref|ZP_05673709.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408]
 gi|258614163|ref|ZP_05711933.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecium DO]
 gi|260559354|ref|ZP_05831535.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68]
 gi|261209112|ref|ZP_05923515.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6]
 gi|289567338|ref|ZP_06447712.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF]
 gi|293563994|ref|ZP_06678400.1| polyprenyl synthetase [Enterococcus faecium E1162]
 gi|293568569|ref|ZP_06679887.1| polyprenyl synthetase [Enterococcus faecium E1071]
 gi|294615036|ref|ZP_06694924.1| polyprenyl synthetase [Enterococcus faecium E1636]
 gi|294618420|ref|ZP_06697994.1| polyprenyl synthetase [Enterococcus faecium E1679]
 gi|294622823|ref|ZP_06701775.1| polyprenyl synthetase [Enterococcus faecium U0317]
 gi|314940477|ref|ZP_07847623.1| polyprenyl synthetase [Enterococcus faecium TX0133a04]
 gi|314942588|ref|ZP_07849421.1| polyprenyl synthetase [Enterococcus faecium TX0133C]
 gi|314949713|ref|ZP_07853027.1| polyprenyl synthetase [Enterococcus faecium TX0082]
 gi|314953265|ref|ZP_07856201.1| polyprenyl synthetase [Enterococcus faecium TX0133A]
 gi|314992667|ref|ZP_07858080.1| polyprenyl synthetase [Enterococcus faecium TX0133B]
 gi|314998247|ref|ZP_07863119.1| polyprenyl synthetase [Enterococcus faecium TX0133a01]
 gi|68194317|gb|EAN08831.1| Trans-hexaprenyltranstransferase [Enterococcus faecium DO]
 gi|257814617|gb|EEV43375.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,230,933]
 gi|257818043|gb|EEV45371.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,502]
 gi|257822011|gb|EEV49141.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,501]
 gi|257828077|gb|EEV54703.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,410]
 gi|257830435|gb|EEV57042.1| trans-hexaprenyltranstransferase [Enterococcus faecium 1,231,408]
 gi|260074453|gb|EEW62774.1| trans-hexaprenyltranstransferase [Enterococcus faecium C68]
 gi|260076939|gb|EEW64663.1| trans-hexaprenyltranstransferase [Enterococcus faecium TC 6]
 gi|289160861|gb|EFD08787.1| trans-hexaprenyltranstransferase [Enterococcus faecium D344SRF]
 gi|291588711|gb|EFF20541.1| polyprenyl synthetase [Enterococcus faecium E1071]
 gi|291592098|gb|EFF23719.1| polyprenyl synthetase [Enterococcus faecium E1636]
 gi|291595317|gb|EFF26636.1| polyprenyl synthetase [Enterococcus faecium E1679]
 gi|291597719|gb|EFF28859.1| polyprenyl synthetase [Enterococcus faecium U0317]
 gi|291603912|gb|EFF33440.1| polyprenyl synthetase [Enterococcus faecium E1162]
 gi|313587756|gb|EFR66601.1| polyprenyl synthetase [Enterococcus faecium TX0133a01]
 gi|313592801|gb|EFR71646.1| polyprenyl synthetase [Enterococcus faecium TX0133B]
 gi|313594692|gb|EFR73537.1| polyprenyl synthetase [Enterococcus faecium TX0133A]
 gi|313598660|gb|EFR77505.1| polyprenyl synthetase [Enterococcus faecium TX0133C]
 gi|313640334|gb|EFS04915.1| polyprenyl synthetase [Enterococcus faecium TX0133a04]
 gi|313643926|gb|EFS08506.1| polyprenyl synthetase [Enterococcus faecium TX0082]
          Length = 328

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  +L E  KR++        +T           +   I     GGK +R       + 
Sbjct: 12  ALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFSQ 60

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ + A+IE +H  +LIHDD+  +D   +RRG+P +  Q+  V ++ AG+ 
Sbjct: 61  FGPEQDRDKAIALAASIEMLHTATLIHDDI--VDEADLRRGQPNIRSQFGNVVSVYAGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L    F+++S   T LK    S  + S +    L G L GQM D  +  +   +      
Sbjct: 119 LFVCCFKLLSDYSTSLK----SLQLNSRSMEKVLNGEL-GQMDDRYNYELSVKEYLENIS 173

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            KT  L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD     +++ K
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGK 230


>gi|114319994|ref|YP_741677.1| trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226388|gb|ABI56187.1| Trans-hexaprenyltranstransferase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 322

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 10/196 (5%)

Query: 39  LLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L+  + + ++  GGK++R  LV   A          +++ A +E IH  +L+HDD+  +D
Sbjct: 31  LIDQMGHYIVNSGGKRLRPLLVLLAARAAGYRGEHHIKLAAVVEFIHTATLLHDDV--VD 88

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              +RRG+ T +  +    A++ G+ L T AFE++          +    +++ T N   
Sbjct: 89  ESTLRRGQDTANSIWGNEAAVLVGDFLYTRAFEMMVEVGL-----LPIMQVMARTTNTIA 143

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +G +  Q+L+  D  + E +   +   KT +L   AC  G  +A   Q + + L  +G +
Sbjct: 144 EGEVM-QLLNCHDPDVSEARYRDVIYRKTASLFEAACCLGGTIAGLPQAQTDHLAAYGLH 202

Query: 217 LGIIFQLADDLLDCEE 232
           LG  +QL DD LD   
Sbjct: 203 LGTAYQLVDDALDYAG 218


>gi|253732112|ref|ZP_04866277.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253724159|gb|EES92888.1| trans-hexaprenyltranstransferase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 332

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 24  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 77  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 135 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 185

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 186 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 233


>gi|298717274|ref|YP_003729916.1| geranyltranstransferase [Pantoea vagans C9-1]
 gi|298361463|gb|ADI78244.1| geranyltranstransferase [Pantoea vagans C9-1]
          Length = 303

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 12/226 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA-- 72
           I+  LD LL   +        D + +A+R  AL  GK+IR  L+   A     +   A  
Sbjct: 24  IEHRLDQLLPVESER------DLVGAAMREGALAPGKRIRPLLLLLAARDLGCSATPAGL 77

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L +  A+E +H  SLI DD+P MD+  +RRG+PT+H QY E  AI+A   LL+ AF +++
Sbjct: 78  LDLACAVEMVHAASLILDDMPCMDDAQLRRGRPTIHCQYGEHVAILAAVALLSKAFGVVA 137

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMC 190
             +  L    R+  +  L+H +G+QG++ GQ  D    D+      + M    KT  L C
Sbjct: 138 MAE-GLTAAARADAVAELSHAVGMQGLVQGQFKDLSEGDKPRSADAILMTNHYKTSTLFC 196

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + +  +I+A   +  +E+L  F  NLG  FQL DDL D   D  K
Sbjct: 197 ASMQMASIVAETPKEAREQLHRFSLNLGQAFQLLDDLTDGMADTGK 242


>gi|254468449|ref|ZP_05081855.1| geranyltranstransferase [beta proteobacterium KB13]
 gi|207087259|gb|EDZ64542.1| geranyltranstransferase [beta proteobacterium KB13]
          Length = 290

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 121/207 (58%), Gaps = 3/207 (1%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
              ND    AI+YA+  GGK+IR++L+      F ++      +GA+IE IH YSL+HDD
Sbjct: 23  PNSNDINHKAIKYAISNGGKRIRAYLLFTLGKHFGISKNVLNILGASIEMIHAYSLVHDD 82

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP MD+  +RRGK T H ++DE  A++ G+ L + AFE++SS K ++   ++ + +  L 
Sbjct: 83  LPCMDDDDLRRGKLTCHKKFDEAQALLVGDALQSLAFELLSSNKLKIDPELKLECINLLA 142

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ--VFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            +IG +GM+ GQ LD+  E    T+  +  I + KTG L+       +I++    +  + 
Sbjct: 143 SSIGSKGMVLGQSLDMIYEKKKPTKKIIEKIHRNKTGMLISTCILIPSIISRQRNSTHKN 202

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+   ENLG+++Q+ DD LD   D+ K
Sbjct: 203 LKILSENLGLLYQMVDDYLDATSDVEK 229


>gi|118576854|ref|YP_876597.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
           [Cenarchaeum symbiosum A]
 gi|118195375|gb|ABK78293.1| geranylgeranyl pyrophosphate synthase/geranyltranstransferase
           [Cenarchaeum symbiosum A]
          Length = 272

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 17/216 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           RID  L+    + A H + +    L   +RYA+ GGK+IR  ++   A            
Sbjct: 10  RIDAALE---AELALHPELE----LTGPLRYAITGGKRIRPIILVLAAESVGSADDNTYA 62

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E +H  S+IHDD+  +D+  +RR K   HI+Y + T+I+ G+ +L    +I S  
Sbjct: 63  AACAVELLHTESVIHDDI--IDDETMRRHKDPFHIKYGQNTSILTGDFVLGLILKICSRL 120

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGM-LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                DN+R    LS T  +  +G  + G++ +  D  +       + + KT      A 
Sbjct: 121 -----DNVRIADDLSTTAMMMSEGEAIEGRLENSGD--VTFDDYLKVIEYKTATAFEVAS 173

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + GAI+   S+ + E L  FG+N+GI +Q+ DDL D
Sbjct: 174 KIGAILGGGSERQVEDLTGFGKNIGIAYQIKDDLND 209


>gi|323439529|gb|EGA97250.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           O11]
 gi|323442232|gb|EGA99863.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           O46]
          Length = 314

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 6   KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 58

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 59  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 117 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 167

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 168 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 215


>gi|224371856|ref|YP_002606022.1| IspB [Desulfobacterium autotrophicum HRM2]
 gi|223694575|gb|ACN17858.1| IspB [Desulfobacterium autotrophicum HRM2]
          Length = 327

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 19/239 (7%)

Query: 1   MNGGLPSKL----QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
           M   L  ++     E+   I+  L   L      ++      L S       GGK++R  
Sbjct: 1   MKDALKQRILASVSEDLTAIEGALATNLRPNLDLVRQIAGHLLFS-------GGKRLRPL 53

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L    + L N     AL V    E +H  +L+HDD+  +D   +RRG+ T H  +     
Sbjct: 54  LFLLSSRLCNYGGDLALDVSTLFEYLHAATLLHDDV--VDEAEMRRGRKTAHSTWGAAQV 111

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ LL  +  + +        N+ S +   ++           Q+       + E +
Sbjct: 112 VLTGDFLLARSLCLAARTGRPEIINVISGITEEMSQGEI------DQLDKKGKLNLSEAE 165

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              I K KT  L+  AC SGAI++ A  + ++ L  +G +LG+ FQ+ADDLLD   D  
Sbjct: 166 YMAIIKGKTAVLIQGACRSGAILSRAPADREQALADYGYHLGMAFQMADDLLDYTADAA 224


>gi|292669963|ref|ZP_06603389.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia
           ATCC 43541]
 gi|292648375|gb|EFF66347.1| heptaprenyl diphosphate synthase component II [Selenomonas noxia
           ATCC 43541]
          Length = 349

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 15/230 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           +N  +   +Q + + ++  L + +  + + + T     L+S+      GGK++R  L   
Sbjct: 25  LNNDMFDVIQADLEMLELTLTEAIA-SETALVTDIGTHLVSS------GGKRLRPALFLV 77

Query: 61  CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A    + +   A+ + AA+E +H  SL+HDD+  +D    RRG  T + ++    AI+ 
Sbjct: 78  AARGGTSFDPARAMPIAAALELVHTASLVHDDV--IDEADTRRGAATANAKWGNQIAILT 135

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ +   AF++I+         ++   ++       +      Q   +     DE+  + 
Sbjct: 136 GDYIFARAFKLIAEKGYDSSIYVKLAQLVCTLSEGEIL-----QDHTVYQVPKDESAYYE 190

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             + KT   +   CE GA++   S ++  R+  +G+ LG+ FQ+ DDLLD
Sbjct: 191 RIRKKTADFLEICCELGAMIGGMSADDTARMAQYGQALGMAFQITDDLLD 240


>gi|283470681|emb|CAQ49892.1| heptaprenyl diphosphate synthase component II (hepppsynthase
           subunit 2) (spore germination protein c3)
           [Staphylococcus aureus subsp. aureus ST398]
 gi|302333080|gb|ADL23273.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 319

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 11  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 64  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 122 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 173 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 220


>gi|53720615|ref|YP_109601.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243]
 gi|126451455|ref|YP_001067764.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1106a]
 gi|237813898|ref|YP_002898349.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346]
 gi|242316724|ref|ZP_04815740.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b]
 gi|254180568|ref|ZP_04887166.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
 gi|254190992|ref|ZP_04897498.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254199098|ref|ZP_04905513.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13]
 gi|52211029|emb|CAH37017.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei K96243]
 gi|126225097|gb|ABN88637.1| polyprenyl synthetase [Burkholderia pseudomallei 1106a]
 gi|157938666|gb|EDO94336.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pasteur
           52237]
 gi|169656928|gb|EDS88325.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei S13]
 gi|184211107|gb|EDU08150.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
 gi|237505493|gb|ACQ97811.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei MSHR346]
 gi|242139963|gb|EES26365.1| polyprenyl synthetase [Burkholderia pseudomallei 1106b]
          Length = 332

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 14  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 67  GALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE +   + +
Sbjct: 125 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDEARYMQVIR 178

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 179 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 228


>gi|29828193|ref|NP_822827.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29605295|dbj|BAC69362.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
          Length = 376

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 85  GGKAVRPALAVLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 142

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T      R+   L+      + G       + +
Sbjct: 143 KVHGPAQAILVGDALFALANEILLELGTVEAG--RATRRLTTASRALIDGQAQDISYEHR 200

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  AC  GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 201 -ERVTVEECLEMEGNKTGALLACACSIGAVLGGADDRTADTLEKYGYHLGLAFQAVDDLL 259

Query: 229 DCEED 233
               D
Sbjct: 260 GIWGD 264


>gi|313204660|ref|YP_004043317.1| polyprenyl synthetase [Paludibacter propionicigenes WB4]
 gi|312443976|gb|ADQ80332.1| Polyprenyl synthetase [Paludibacter propionicigenes WB4]
          Length = 328

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 13/214 (6%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
            L  +T +      N  L +   Y L   GK++R  LV   A L    +   +    A+E
Sbjct: 20  QLFRETFAEALKTDNPMLETVHEYVLQKSGKQLRPMLVLLSAKLCGHVNQNTVDGALALE 79

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SLIHDD+  +D+   RRGKP+++ ++    AI++G+ +L+ A             
Sbjct: 80  LLHTASLIHDDV--VDDTLERRGKPSINARWTNKIAILSGDYILSKAL--------VCAT 129

Query: 141 NIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              S  +L    NIG+Q   G   Q+ ++Q     E     I + KT  L     E G +
Sbjct: 130 KTNSLPVLKSIANIGMQLSDGELLQLSNVQVLNASEENYLTIIRKKTALLFSTCTEVGGL 189

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +A+++   RLR FGE LGI FQ+ DD+ D  E
Sbjct: 190 SVNAAEDTLVRLRNFGEYLGICFQIKDDIFDYSE 223


>gi|116074594|ref|ZP_01471855.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. RS9916]
 gi|116067816|gb|EAU73569.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Synechococcus sp. RS9916]
          Length = 323

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGKKIR  +V   +   +
Sbjct: 2   TTVTELLQPVELDLETLLSDLRSLIGAGHPILQAAAEHLFSAGGKKIRPGIVLLVSRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PEGELTARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVATVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDDLEVVKLLSRVIMDLADGEVKQGLFR------YDTGQSFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  +  +  +++  + +  + L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSARAAGVLSEQTPDRLDSLYRFGRQLGLAFQVVDDILDFTG 222


>gi|332141878|ref|YP_004427616.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551900|gb|AEA98618.1| geranyltranstransferase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 296

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 10/232 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN 68
           Q+  ++ D  L  L+ +        +  RL  A+R+ALL GGK++R  LV    +  +V 
Sbjct: 8   QQVKQQTDASLLTLIDEL-----PDYAPRLKDAMRHALLAGGKRMRPLLVQVVGNTLDVP 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +  AIEC+H YSL+HDDLP+MD+  +RRG PT HI +DE TAI+AG+ L   AF
Sbjct: 63  KTDQMAISMAIECVHAYSLVHDDLPAMDDDDLRRGMPTCHIAFDEATAILAGDALQALAF 122

Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKT 185
            +++  P +   +  R QL+  L  + G  GM GGQ +D+    E I   ++  + K+KT
Sbjct: 123 TVLADAPLSTYAEAKRPQLLSVLAKSAGYVGMCGGQAIDLASTGESISLDELKRLHKLKT 182

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GAL+    E  AI++       K  L  +  ++G+ FQ+ DD+LD      K
Sbjct: 183 GALLRACVEMVAIVSEDLLPEAKVDLMAYAADIGLAFQVQDDILDVVGSSEK 234


>gi|118602394|ref|YP_903609.1| dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567333|gb|ABL02138.1| Dimethylallyltranstransferase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 323

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 115/233 (49%), Gaps = 15/233 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             + S L+ + ++ D IL + L    + +    +  + +       GGK++R  L+  CA
Sbjct: 5   SDIQSLLKLDLQKTDEILINRLSSNVALINQMGHYIIHA-------GGKRLRPLLLLLCA 57

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       +   IE IH  +L+HDD+  +D    RRGK TV+  +    +++ G+ 
Sbjct: 58  RATEYQGTHHYLMAVVIELIHTATLLHDDI--VDESITRRGKDTVNEVWGNAPSVLVGDF 115

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + AFE++  P +     +    +LS T N   +G +  Q+L+ ++  + ET+ + + +
Sbjct: 116 LYSRAFEMMIEPNS-----MYIIRILSKTTNSIAEGEVL-QLLNCKNTELTETEYYAVIE 169

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT  L   A + G +++   + ++  L+ +G +LG  FQ+ DD+LD E ++ 
Sbjct: 170 RKTACLFQAATQIGGLLSGVDKAQESALKDYGLHLGNAFQIIDDVLDYESNVK 222


>gi|86134465|ref|ZP_01053047.1| polyprenyl synthetase [Polaribacter sp. MED152]
 gi|85821328|gb|EAQ42475.1| polyprenyl synthetase [Polaribacter sp. MED152]
          Length = 325

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 13/218 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +            LL+ I Y +    GK++R   V   A +           R  + +
Sbjct: 17  LFEKKFKDSMLSKVPLLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERTYRGASVV 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S   +  
Sbjct: 77  ELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLVGDFLLSKG--LLLSIDNEDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D ++   ++S+      +G L  Q+   +   I E   F I + KT  L+   C  GA  
Sbjct: 133 DLLK---LISIAVREMSEGELL-QIEKARKLDITEDIYFDIIRQKTATLIAACCGIGAAS 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
             A+Q+  +++R FGE +GI FQ+ DDL D  +E + K
Sbjct: 189 VGANQDTVQQMRKFGEYIGIAFQIKDDLFDYSDEKIGK 226


>gi|296108301|ref|YP_003620002.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila
           2300/99 Alcoy]
 gi|295650203|gb|ADG26050.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila
           2300/99 Alcoy]
          Length = 322

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +  ++     +         +L+ T +    G +  Q+ +  
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMVEVGIKE-----ILNLLANTSHQITCGEVK-QLANRH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +     F + + KT  L   A   G I+ +A    ++ L  +G +LG  FQL DD L
Sbjct: 155 NPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRDSLYNYGLHLGNAFQLIDDAL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYCSDAA 221


>gi|307611532|emb|CBX01209.1| hypothetical protein LPW_29081 [Legionella pneumophila 130b]
          Length = 322

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +  ++     +         +L+ T +    G +  Q+ +  
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMVEVGIKE-----ILNLLANTSHQITCGEVK-QLANRH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +     F + + KT  L   A   G I+ +A    +  L  +G +LG  FQL DD L
Sbjct: 155 NPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRNSLYNYGLHLGNAFQLIDDAL 214

Query: 229 DCEED---LPK 236
           D   D   L K
Sbjct: 215 DYCSDATTLGK 225


>gi|307323924|ref|ZP_07603133.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306890373|gb|EFN21350.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 342

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 7/217 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +LLL+          +RL    RYALL  GK +R  L+ E A          +    ++E
Sbjct: 23  ELLLRELDRRWPPEAERLHQISRYALLPAGKLLRPLLLMESAEAVGGGGPAVVPAALSVE 82

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+HDD+  +D    RRG+P+V  +Y    AI+ G+ L+   F +++    +   
Sbjct: 83  YLHVGSLVHDDV--IDGDATRRGRPSVVARYGTADAIVTGDALMLGMFGVLTDGAEEAGG 140

Query: 141 NIRSQLM-LSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESG 196
               +++            +  GQ ++ +   D      +   +  +KTGAL   AC  G
Sbjct: 141 LPPGRVLGAVRVFARAGVDLCRGQSMEGELRGDLGCGLDRYLTMSSLKTGALFRAACRGG 200

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AI+   S  ++  L  + E+LG+ FQ+ DDLL    D
Sbjct: 201 AILGGGSPAQQHALTAYAEHLGLAFQMHDDLLPYTSD 237


>gi|113868691|ref|YP_727180.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16]
 gi|113527467|emb|CAJ93812.1| geranylgeranyl pyrophosphate synthase [Ralstonia eutropha H16]
          Length = 294

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 4/203 (1%)

Query: 36  NDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
              L  A+RYA L GGK++R  LV     +             A+E IH YSL+HDD+P 
Sbjct: 30  PHTLHEAMRYAALSGGKRVRPLLVHAAGEVSGAAPAACDAAACAVEMIHAYSLVHDDMPC 89

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD+  +RRG+PTVH  YDE TA++ G+ L T AF I+ +    +    R QL+  L    
Sbjct: 90  MDDDDLRRGRPTVHKAYDEATALLVGDALQTQAF-IVLAGAGAIAPAARLQLVAELALAS 148

Query: 155 GLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           G  GM GGQ +D+Q+    +    +  + +MKTGAL+  +   GA+           L  
Sbjct: 149 GSTGMAGGQAIDLQNVGRAMTREALEAMHRMKTGALLRASVRMGALCGEIDAEGLAALDR 208

Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
           +   +G+ FQ+ DD+LD   D  
Sbjct: 209 YAAAVGLAFQVVDDILDVTADTA 231


>gi|225849175|ref|YP_002729339.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644434|gb|ACN99484.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 317

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 24/230 (10%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-NVNH 69
           + +++++ L   L  +         D +L    Y L  GGK++R +LV + AS+    N 
Sbjct: 5   DKEKVESTLRKYLDSSV--------DFILQVGGYILDGGGKRVRPYLVLKFASMIRGYNK 56

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                + +A+E +H  SL+HDD+  +D    RRG+ T +  +   T ++ G+ +   A  
Sbjct: 57  EEDYILASALEYLHTASLLHDDV--VDESEKRRGRLTANRVFGNDTTVLVGDYMYANALY 114

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTG 186
           + S         I   + +    +  ++ M  GQ+L+   I +        + I   KT 
Sbjct: 115 LFS---------IYGDIDMIKNVSDSVKKMAEGQLLELKKIANFDTTFDDYYKIVLGKTA 165

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            L    C  G  +A   +N KE    +G NLG+ FQ+ DD+LD E D  K
Sbjct: 166 VLFGSCCYVGTALASEDKNLKENAYQYGVNLGVAFQIVDDILDYEGDEEK 215


>gi|237756556|ref|ZP_04585080.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691284|gb|EEP60368.1| octaprenyl-diphosphate synthase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 317

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 49  GGKKIRSFLVTECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R +LV + +  + N N      + AA+E +H  SL+HDD+  +D   +RRGKPT 
Sbjct: 35  GGKRVRPYLVLKFSKIMKNKNEEKDYILAAALEYLHTASLLHDDV--VDGSQLRRGKPTA 92

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           +  +   T ++ G+ +   A  + S+          SQ +         + M  GQ+L+ 
Sbjct: 93  NRIFGNDTTVLTGDYMYANALYLFSTHGDIDMIKNVSQTV---------KKMAEGQLLEL 143

Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             I D  I   + + I + KT AL    C  G  +   ++  K++   +G N+G+ FQ+ 
Sbjct: 144 KKIADFDITLQEYYSILEGKTAALFGSCCYVGTALGTDNETLKQKAFEYGLNIGMAFQIV 203

Query: 225 DDLLDCEEDLPK 236
           DDLLD      K
Sbjct: 204 DDLLDYTGKEEK 215


>gi|91201536|emb|CAJ74596.1| similar to geranylgeranyl pyrophosphate (GGPP) synthetase
           [Candidatus Kuenenia stuttgartiensis]
          Length = 327

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
           G+   ++    +ID +L +L+            + L   I Y +   GK++R  +     
Sbjct: 2   GIEDSIRTYGAKIDDMLRELI-------PVDEENYLSEPIWYHMNTKGKRVRPAICLITC 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N   AL    AIE +H   L+HDD+   D   +RR +PTV ++Y    AI AG+ 
Sbjct: 55  EALGGNPENALSFALAIEVLHNMFLMHDDIE--DGDTVRRDQPTVWVKYGTANAINAGDY 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179
           LL  A++  S+  + +    R +L+ +LT   G    + GQ LDI     E         
Sbjct: 113 LLACAYK--STLASPVAPEKRLKLLEALTLTYG--KTVEGQALDINARAAESFTVAAYMK 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + ++KTG  +      GAI+A AS    E++   G+N+G  FQ+ DDL+D  
Sbjct: 169 MVELKTGYYLACGMVGGAIVAGASNEVVEKIWMLGKNMGPAFQIRDDLIDLT 220


>gi|329888094|ref|ZP_08266692.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328846650|gb|EGF96212.1| polyprenyl synthetase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 303

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 131/230 (56%), Gaps = 6/230 (2%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
            +  ++ E +  +   LD LL +           RL  A+RYA LG GK++R F   E  
Sbjct: 12  AVIDRVAEIADLVTVALDQLLPRADGP-----EARLTEAMRYAALGPGKRLRPFFAIEAG 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +  V    ALR   A+EC+H YSL+HDDLP+MD+  +RRG+PT+HI YDE TAI+AG+ 
Sbjct: 67  RMLEVEERAALRAACALECVHAYSLVHDDLPAMDDDDVRRGRPTLHIAYDEATAILAGDA 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T AF+II    T     +R +L   L+   G +GM GGQM+D+     D   V  +Q+
Sbjct: 127 LQTAAFDIILDEDTHDDAVVRCELARRLSFASGARGMAGGQMIDLMGVRDDLGGVARMQR 186

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +KTGAL  +A E   I+A A++     L  F  ++G+ +Q+ DD+LD E 
Sbjct: 187 LKTGALFAYAFEIPLIIADANEAAWHALTSFAHDIGLAYQIVDDVLDAEG 236


>gi|159470571|ref|XP_001693430.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii]
 gi|158282933|gb|EDP08684.1| solanesyl diphosphate synthase [Chlamydomonas reinhardtii]
          Length = 394

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 14/230 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA------ 62
           L E    +   +  +     + +  +H   + +A +    GGKK+R  +V   A      
Sbjct: 72  LSEILAPVTADMQQMNTNLKNVVGNRHPMLMAAAEQIFGAGGKKLRPVIVFLVAHCTAQR 131

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                      R+    E IH  SL+HDD+  +D   IRRGK T++  Y    A++AG+ 
Sbjct: 132 EGLTELTEKHRRLAEITEMIHTASLVHDDV--LDECDIRRGKQTINSMYGTRVAVLAGDF 189

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +   +++        + SQ++    +          Q   + D  I   Q      
Sbjct: 190 LFAQSSWFLANLDNLEVIKLISQVIADFANGEIS------QAASLFDTDITLEQYLDKSF 243

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  +C S A+ + +    KE +  +G++LG+ FQ+ DD+LD  +
Sbjct: 244 YKTASLIAASCRSAAVFSDSPVEVKEAMYAYGKHLGLAFQVVDDILDFTQ 293


>gi|330444019|ref|YP_004377005.1| geranyl transtransferase [Chlamydophila pecorum E58]
 gi|328807129|gb|AEB41302.1| geranyl transtransferase [Chlamydophila pecorum E58]
          Length = 293

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 108/235 (45%), Gaps = 16/235 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
                  I+  +++ L +       +    + + + YAL  GGK+IR  LV   A     
Sbjct: 7   FDTYRPAIEAAIEESLDEFG-----ESEKTIRAPVEYALKTGGKRIRPLLVCMLAHGIG- 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            H   +    A+E  H  +LI DDLP MDN   RRG+PTVH  + E  A++A   L+  A
Sbjct: 61  KHCDVMDSALAVEFAHTSTLIADDLPCMDNDDERRGRPTVHKVFGEALALLASYALIPAA 120

Query: 128 FEIISSPKTQLKD--------NIRSQLMLSLT-HNIGLQGMLGGQMLDIQDEFIDETQVF 178
           +        +LK         ++   ++L +T  NIG  G+LGGQ  D+         V 
Sbjct: 121 YSHFHKNAKKLKKQGYNPQAIDVAYDIILEVTNRNIGCAGVLGGQYDDMFFSNKGREHVQ 180

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I   KTGAL   A  SG +    S N   ++  F  + G++FQ+ DD LD E+D
Sbjct: 181 SIMVKKTGALFEIASVSGWLFGGGSPNLLPQIIEFSRHFGLLFQIKDDFLDYEKD 235


>gi|221640630|ref|YP_002526892.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131]
 gi|221161411|gb|ACM02391.1| Farnesyl-diphosphate synthase [Rhodobacter sphaeroides KD131]
          Length = 289

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 91/237 (38%), Positives = 136/237 (57%), Gaps = 15/237 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
                L + + R+   LD  L         + +  ++ A+RYA+ GGK++R FLV E A 
Sbjct: 2   SFSKALTDAAARVQARLDAALAD-------REDLPVVHAMRYAVQGGKRLRGFLVLESAR 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  +    A+   A+IE +H YSL+HDD+P MD+  +RRG PTVH ++DE TA++AG+ L
Sbjct: 55  LHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179
            T AFE+++ P       +R +L+ SL    G +GM+ GQ LDI  E     +   Q+  
Sbjct: 115 QTLAFELLADPALG-SAEVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITH 173

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +Q  KTGAL+ ++ E+GAI+  A    +  LR +   LG+ FQ+ADD+LD E D  K
Sbjct: 174 LQAGKTGALIRWSAEAGAILGQAD---RVPLRRYATALGLAFQIADDILDVEGDAEK 227


>gi|311896831|dbj|BAJ29239.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 362

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 15/224 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
              +DT+ D + L +  H+     D   SA    +  GK IR  +V    +        A
Sbjct: 45  RAAVDTLPDSMRLISGYHLGWLEADGAPSA----VGAGKSIRPAMVLAATTAVGGRPQDA 100

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R  AA+E +H ++L+HDD+  +D  + RR +PT    +    AI+AG+ + + A  +++
Sbjct: 101 VRAAAAVELVHNFTLLHDDV--IDRDHTRRHRPTAWRVFGTTGAILAGDAMHSLALRVLA 158

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALM 189
                       +L         +  +  GQ  D   E    +   +   + + KTGAL+
Sbjct: 159 EDPHPAAAAAVRRL------ADCVVELCAGQQADCSFEQRTDVTLAECLTMAEGKTGALL 212

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             AC  GA+ A A     + +  FG  +G+ FQL DDL+    D
Sbjct: 213 GCACALGALYAGADAETADAMDAFGREIGLAFQLIDDLIGIWGD 256


>gi|53726074|ref|YP_104070.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344]
 gi|121600728|ref|YP_991797.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1]
 gi|124384831|ref|YP_001027290.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229]
 gi|126441901|ref|YP_001060502.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668]
 gi|126448324|ref|YP_001082773.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247]
 gi|52429497|gb|AAU50090.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 23344]
 gi|121229538|gb|ABM52056.1| octaprenyl-diphosphate synthase [Burkholderia mallei SAVP1]
 gi|124292851|gb|ABN02120.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10229]
 gi|126221394|gb|ABN84900.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 668]
 gi|126241194|gb|ABO04287.1| octaprenyl-diphosphate synthase [Burkholderia mallei NCTC 10247]
          Length = 330

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 12  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 226


>gi|3410887|dbj|BAA32241.1| decaprenyl diphosphate synthase [Gluconobacter oxydans]
          Length = 315

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 12/190 (6%)

Query: 48  LGGKKIRSFLVTECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            GGK++R  L    A L       +H   + + A +E IH  +L+HDD+  +D   +RRG
Sbjct: 29  AGGKRLRPLLTLASARLCGYQPGPDHQRHVGLAACVEFIHTATLLHDDV--VDESTLRRG 86

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             + +  +    +++ G+ L   +F+++++  +     ++   +LS       +G +  Q
Sbjct: 87  LASANAVFGNKASVLVGDFLFARSFQLMTADGS-----LKVMAILSDASATIAEGEVL-Q 140

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           M+   D      +   +   KT AL   AC  GA++A   + E+E L  FG NLG+ FQL
Sbjct: 141 MVVQNDLTTPVERYLEVIHGKTAALFAAACRVGAVVAERPEAEEEALERFGTNLGMAFQL 200

Query: 224 ADDLLDCEED 233
            DD LD   D
Sbjct: 201 VDDALDYAAD 210


>gi|298694759|gb|ADI97981.1| heptaprenyl diphosphate syntase component II [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 314

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 6   KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 58

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 59  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 116

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 117 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 167

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 168 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKK 215


>gi|5734760|gb|AAD50025.1|AC007651_20 Very similar to prenyl transferase [Arabidopsis thaliana]
          Length = 379

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L      +    N  L+SA       GGK++R  LV       A L  + 
Sbjct: 61  FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLK 120

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+G  IE IH  SLIHDD+  +D   +RRG+ TVH  +    A++AG+ +   
Sbjct: 121 ELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRRGRETVHELFGTRVAVLAGDFMFAQ 178

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   +++ +      + SQ++               Q   + D  +      +    KT 
Sbjct: 179 ASWYLANLENLEVIKLISQVIKDFASGEI------KQASSLFDCDVKLDDYMLKSYYKTA 232

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +       E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 233 SLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQ 278


>gi|159184398|ref|NP_353656.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str.
           C58]
 gi|159139711|gb|AAK86441.2| octaprenyl-diphosphate synthase [Agrobacterium tumefaciens str.
           C58]
          Length = 338

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASASMFGYEGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSTAASVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 169 NMETTEDDYLQVIRAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGKSADLGK 239


>gi|8272414|dbj|BAA96459.1| farnesyl diphosphate synthase [Rhodovulum sulfidophilum]
          Length = 289

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 92/236 (38%), Positives = 140/236 (59%), Gaps = 14/236 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
             S L+  ++RI+T L + L   A    TQ       A+RYA+ GGK++R FLV E A+L
Sbjct: 2   FQSSLKSAAERIETRLTEALAGAADQPVTQ-------AMRYAVSGGKRLRGFLVLESAAL 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +++    A+   AA+E +H YSL+HDD+P MD+  +RRG+PTVH+++D+ TA++ G+ L 
Sbjct: 55  YDIAPEAAVDAAAAVEALHAYSLVHDDMPCMDDDDLRRGQPTVHVKWDDGTALLTGDALQ 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           T AFE++S+P       +R  L+ SL    G+ GM+ GQ  DI  E     +   ++  +
Sbjct: 115 TLAFELLSAPACHPDPAVRIDLVASLARASGIDGMVLGQAQDIAAETAGRSLTLDEITEL 174

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           Q  KTGAL+ ++ E+GA +A A       L  +   LG+ FQ+ADD+LD E D  K
Sbjct: 175 QANKTGALIRWSAEAGARLARAD---IAPLTAYSTALGLAFQIADDILDVEGDAAK 227


>gi|239943496|ref|ZP_04695433.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 15998]
 gi|239989950|ref|ZP_04710614.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 11379]
 gi|291446967|ref|ZP_06586357.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291349914|gb|EFE76818.1| isoprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 336

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L +   ++     T     L+ A      GGK+ R  LV   
Sbjct: 13  DQALEADVQSGLAAVEAGLLEA-TKSDVPFITDAAQHLVRA------GGKRFRPLLVMLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +   + +    +     +E  H  +L HDD+  MD   +RRG P+ + ++    A++ G+
Sbjct: 66  SQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVPSANTRWGNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A  I++    +                   + ++ GQ+L+    +D         
Sbjct: 124 FLFARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVDHYL 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  +   GA+M+ A +   + L  +GE LGI FQLADD+LD   D
Sbjct: 174 DVLSGKTGSLVAVSGRFGAMMSGADERTVDILTQYGERLGIAFQLADDVLDIASD 228


>gi|166709970|ref|ZP_02241177.1| farnesyl diphosphate synthase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 332

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 14/235 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
            +Q  ++R++ +L   L         + +  L++A+RYA L GGK+ R+ L     +L +
Sbjct: 28  WMQAGAQRVEQVLARRLC-----AGNEESTELMTAMRYATLQGGKRTRALLCLAAGALAD 82

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   +GAAIE +H  +L+HDDLP+MDN  +RRG PTVH+++ E TAI+ G+ L  +
Sbjct: 83  TPAHVLDDIGAAIEMMHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAH 142

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           AF  ++         IR  L+  L H +   G  GGQ +D+    + +    +  + +MK
Sbjct: 143 AFLTLA--GVDASGEIRIALVRELAHAVSADGAAGGQAMDMALVGQSVGLDTIMAMHRMK 200

Query: 185 TGALMCFACESGAIMA----HASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +GAL+  +   G + A             L  +    G+  Q+ DD+LD   D+ 
Sbjct: 201 SGALVRASVRMGTLCALPEGGVHAELAAALDRYSACFGLALQVVDDILDATADVA 255


>gi|16804679|ref|NP_466164.1| hypothetical protein lmo2641 [Listeria monocytogenes EGD-e]
 gi|224503563|ref|ZP_03671870.1| hypothetical protein LmonFR_13848 [Listeria monocytogenes FSL
           R2-561]
 gi|254829090|ref|ZP_05233777.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165]
 gi|255025739|ref|ZP_05297725.1| hypothetical protein LmonocytFSL_04305 [Listeria monocytogenes FSL
           J2-003]
 gi|284800473|ref|YP_003412338.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578]
 gi|284993659|ref|YP_003415427.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923]
 gi|16412129|emb|CAD00719.1| lmo2641 [Listeria monocytogenes EGD-e]
 gi|258601501|gb|EEW14826.1| polyprenyl synthetase [Listeria monocytogenes FSL N3-165]
 gi|284056035|gb|ADB66976.1| hypothetical protein LM5578_0219 [Listeria monocytogenes 08-5578]
 gi|284059126|gb|ADB70065.1| hypothetical protein LM5923_0219 [Listeria monocytogenes 08-5923]
          Length = 326

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+  +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIEKNI----QIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
             KT  L   +C SGA  + A++    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 173 SGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|308270513|emb|CBX27125.1| hypothetical protein N47_A11540 [uncultured Desulfobacterium sp.]
          Length = 326

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           ++   I+  L D L        T + D +    ++ L  GGK++R  L+   A + N   
Sbjct: 14  KDLAEIEVALTDNL--------TPYLDIVSDVAKHILFAGGKRLRPLLMVLSARICNYKG 65

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                     E +H  +L+HDD+  +D   +RRGKP  +  +   T ++ G+ LL     
Sbjct: 66  GYDKVFSTIFEYLHAATLLHDDV--IDGAELRRGKPVANSIWKNSTVVLTGDFLLARGLS 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I ++ +      I +++  +++           Q+L   D  + E +   I   KT  L 
Sbjct: 124 IAAATEKPSVIKIVAEITENMSQGEI------EQLLRKGDINLTEEEYRKIIWRKTAVLF 177

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             AC   A +A+AS+ E++ +  +G NLG+ FQ+ADDLLD   D  
Sbjct: 178 QGACRISARLANASKREEKAVSNYGYNLGMAFQMADDLLDYTLDTK 223


>gi|50952782|gb|AAT90315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured
           proteobacterium eBACred25D05]
          Length = 308

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 14/228 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLT 71
           KRI+  +   +      +      +L  AI+Y++  GG +IR  ++   A     +    
Sbjct: 23  KRIEAAVRRGVGVFGKKLPV--PQKLDDAIQYSVFPGGARIRPTILLSVAVACGDDNPSL 80

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A    AA+E IHC SL+HDDLP  DN   RRGKP+VH +Y E TA++ G+ L+  AF +I
Sbjct: 81  ANASAAALEMIHCASLVHDDLPCFDNAETRRGKPSVHNKYGEPTAVLVGDSLIANAFGVI 140

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +    +        + L   +    +G+  GQ  + +        +    + KTGAL   
Sbjct: 141 ARAADKDAVRAAKLIALLSKYTGFPKGICAGQAWEAEIS----VDLSAYHQTKTGALFIA 196

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           A + GA  A       E     G  +G  FQ+ADDLLD    E++  K
Sbjct: 197 ATQMGAASAGHDP---EPWFELGARIGEAFQVADDLLDVLCSEDETGK 241


>gi|312438127|gb|ADQ77198.1| heptaprenyl diphosphate synthase [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 332

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LT 71
           K+++  L+  +    S ++      L S       GGK++R   V   +           
Sbjct: 24  KKVEQRLEKAIKSKDSVLEQASLHLLSS-------GGKRVRPAFVILSSQFGKDEQTSEQ 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +V  A+E IH  +L+HDD+  +D    RRGK T+  ++D+ TAI+ GN LL    E +
Sbjct: 77  TYQVAVALELIHMATLVHDDV--IDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGAL 188
            + K      + S+ ++          +  G++   QD+F  +            KT  L
Sbjct: 135 MAVKDNRVHQLISESIVD---------VCRGELFQFQDQFNSQQTIINYLRRINRKTALL 185

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  + E GAI + + +    +L+  G  +G+ FQ+ DD+LD      K
Sbjct: 186 IQLSTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSAEKK 233


>gi|72536080|gb|AAZ73145.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
           DC413]
          Length = 302

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 12/226 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL--TA 72
           I+  LD LL   +        D +  A+R  AL  GK+IR  L+   A            
Sbjct: 23  IEQRLDRLLPVESER------DCVGLAMREGALAPGKRIRPVLLMLAAHDLGYRDELSGL 76

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E +H  SLI DD+P MD+  +RRG+PT+H Q+ E  AI+A   LL+ AF +I+
Sbjct: 77  LDFACAVEMVHAASLILDDIPCMDDAELRRGRPTIHRQFGEPVAILAAVALLSRAFGVIA 136

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMC 190
                +    ++Q +  L+H++G+QG++ GQ LD     +      + +    KT AL  
Sbjct: 137 -LADGISSQAKTQAVAELSHSVGIQGLVQGQFLDLTEGGQPRSADAIQLTNHFKTSALFS 195

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            A +  AI+A A    +E+L  F  +LG  FQL DDL D + D  K
Sbjct: 196 AAMQMAAIIAGAPLASREKLHRFARDLGQAFQLLDDLTDGQSDTGK 241


>gi|251793088|ref|YP_003007814.1| octaprenyl-diphosphate synthase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534481|gb|ACS97727.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase)
           [Aggregatibacter aphrophilus NJ8700]
          Length = 323

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 97/187 (51%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         A+     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRIRPLIAVLAARALGFEGPQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 101 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILRIMADATNVLAEGEV-QQLMNVN 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A +++ +++ L+ +G  LG  FQL DD+L
Sbjct: 155 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGSNEAQEQALQSYGRYLGTAFQLVDDVL 214

Query: 229 DCEEDLP 235
           D   ++ 
Sbjct: 215 DYSANVK 221


>gi|156932566|ref|YP_001436482.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894]
 gi|112702897|emb|CAL34117.1| geranylgeranyl pyrophosphate synthase CRTE [Cronobacter sakazakii]
 gi|156530820|gb|ABU75646.1| hypothetical protein ESA_00347 [Cronobacter sakazakii ATCC BAA-894]
          Length = 301

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 20/248 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           + G   +LQ     + T LD+LL         Q  D + +A+R  AL  GK++R  L+  
Sbjct: 8   SSGQEIELQALRDALQTRLDELLP------PGQERDLVCAAMREGALTPGKRVRPLLLIL 61

Query: 61  CASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            A     +      + +  A+E +H  SL+ DD+P MDN  +RRGKPT+H QY E  AI+
Sbjct: 62  AARDLGCDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAIL 121

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           A   LL+ AF +++     L D+ ++Q +  L+  +GLQG++ GQ  D    ++      
Sbjct: 122 AAVALLSRAFGVVAQA-NPLSDSCKTQAVSELSSAVGLQGLVQGQFRDLSEGNQARSAEA 180

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--------L 228
           +     +KT  L     +  AI A AS + + +LR F  +LG  FQL DDL         
Sbjct: 181 ILATNDLKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQLLDDLADGLNHTGK 240

Query: 229 DCEEDLPK 236
           D  +D  K
Sbjct: 241 DINKDAGK 248


>gi|198284597|ref|YP_002220918.1| polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665678|ref|YP_002427267.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198249118|gb|ACH84711.1| Polyprenyl synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517891|gb|ACK78477.1| octaprenyl-diphosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 322

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 15/228 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           ++ +   +++++ + L      +       L++A      GGK++R  ++   A +    
Sbjct: 10  VRADMAAVNSVIQEQLRSGVPTIPA-MGTYLINA------GGKRLRPIVLLLAARMGGER 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + + A +E IH  +L+HDD+  +D   +RR   T + ++    A++ G+ L   +F
Sbjct: 63  GPRPISLAAVVEFIHTATLLHDDV--VDGSELRRSNATANQRWGNAAAVLVGDFLYARSF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++         ++R    ++   ++  QG +  Q+ +  D  +     F + + KT  L
Sbjct: 121 EMMVQDG-----DMRILATMAEATSVIAQGEVA-QLENANDPDLSPEAYFAVIEAKTAKL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              A   GA++       ++ L  +G  LGI FQL DD LD      K
Sbjct: 175 FEAAARIGALVNELDAAAEKALAQYGSLLGIAFQLMDDALDYSTSAEK 222


>gi|303248764|ref|ZP_07335016.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ]
 gi|302489851|gb|EFL49780.1| Trans-hexaprenyltranstransferase [Desulfovibrio fructosovorans JJ]
          Length = 322

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
                 L      I+  L+D     +  +Q      L       L GGK++R  L    A
Sbjct: 2   SDFADILSREVPAINRHLEDATASLSPLVQPVVRHVL-------LAGGKRLRPLLAILVA 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       +  ++E +H  +L+HDD+  +D   +RRG+P+ H ++     I+AG+ 
Sbjct: 55  RALGHQEDDVYPLACSLEFLHSATLLHDDI--VDGATLRRGRPSAHTRFGATHTILAGDV 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL  A   ++         I S+ +L       L      ++  ++D  +       I  
Sbjct: 113 LLALANRTVAEYDDPELTRILSEALLQTATGEIL------EIAHLRDTDLPLDTYLSIIT 166

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L+  AC  GA++A    N  E  +  G N GI FQL DD LD   
Sbjct: 167 GKTAHLLQAACHCGAVLAGVDANLCEAAKTLGVNCGIAFQLVDDALDYTS 216


>gi|224499314|ref|ZP_03667663.1| polyprenyl synthetase [Listeria monocytogenes Finland 1988]
          Length = 326

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 22/236 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L   LQE  + I+  +         H++    D + +       GGK +R       A
Sbjct: 11  SALSKDLQEVLQTIEKNI----QIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSA 59

Query: 63  SLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+
Sbjct: 60  QAGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMI 180
            L    F+I+S+  + +      + +   + NI    M    QM       +   +    
Sbjct: 118 YLFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTR 171

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
              KT  L   +C SGA  + A++    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 172 ISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|217967661|ref|YP_002353167.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336760|gb|ACK42553.1| Polyprenyl synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 343

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 14/235 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + +KLQEN  +  + +   L+ TA HM     D    A    +  GK++R          
Sbjct: 13  IENKLQENWNKFSSNISIHLI-TAYHMGWVGEDLTPLA---NIRRGKRLRPLFCVLVNQT 68

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                  AL +G+AIE +H +SL+HDD+   D    R G+ TV   + E  AI  G+ L 
Sbjct: 69  LGGFLDDALEIGSAIEFLHNFSLVHDDIQ--DRDEKRHGRWTVWKIWGEAQAINVGDLLF 126

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQ 181
              F+++++ K+ +   + S+ +  LT  I  + ++ GQ LDI  E    I   +  M+ 
Sbjct: 127 NMVFQVLTNLKSPV---LLSKSLKELTETI--RELIEGQYLDISFEKRKDISLKEYLMMI 181

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KT  L   +   GA  A   ++  +  +  G + G+ FQ+ADD +    D  K
Sbjct: 182 DKKTAKLFSTSFYLGAFSATYKEDLSKIFQEIGRDFGLFFQIADDAIGIWGDPEK 236


>gi|47097124|ref|ZP_00234692.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254830926|ref|ZP_05235581.1| hypothetical protein Lmon1_06179 [Listeria monocytogenes 10403S]
 gi|254899908|ref|ZP_05259832.1| hypothetical protein LmonJ_08841 [Listeria monocytogenes J0161]
 gi|254912886|ref|ZP_05262898.1| polyprenyl synthetase [Listeria monocytogenes J2818]
 gi|254937267|ref|ZP_05268964.1| polyprenyl synthetase [Listeria monocytogenes F6900]
 gi|47014491|gb|EAL05456.1| polyprenyl synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609873|gb|EEW22481.1| polyprenyl synthetase [Listeria monocytogenes F6900]
 gi|293590886|gb|EFF99220.1| polyprenyl synthetase [Listeria monocytogenes J2818]
          Length = 326

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+  +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIEKNI----QIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
             KT  L   +C SGA  + A++    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 173 SGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|312795082|ref|YP_004028004.1| farnesyl pyrophosphate synthetase / Geranyltranstransferase /
           farnesyltransferase / Octaprenyl diphosphate synthase
           [Burkholderia rhizoxinica HKI 454]
 gi|312166857|emb|CBW73860.1| Farnesyl pyrophosphate synthetase (EC 2.5.1.1) /
           Geranyltranstransferase (EC 2.5.1.10) /
           Farnesyltransferase (EC 2.5.1.29) / Octaprenyl
           diphosphate synthase (EC 2.5.1.-) [Burkholderia
           rhizoxinica HKI 454]
          Length = 352

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 15/224 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + ++ ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A+     
Sbjct: 40  IADDMQQVNRVIRTRLASDVV-LINQIAEYIIGA------GGKRLRPALLLLVANALGER 92

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ L + AF
Sbjct: 93  SGQRHELAAVIEFIHTATLLHDDV--VDESQLRRGKQTANALFGNAASVLVGDFLYSRAF 150

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++ +      DN+R   +LS   N+  +G +  Q+L++ D  +D+ +   + + KT  L
Sbjct: 151 QMMVAC-----DNLRVMQILSDATNVIAEGEVL-QLLNMHDPDVDQARYMQVIRYKTAKL 204

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              A + GA++A A    +     FG  +G  FQ+ DD LD   
Sbjct: 205 FEAAAQLGAVIAGAPPALEAAAAEFGRTIGTAFQIMDDWLDYTG 248


>gi|298674206|ref|YP_003725956.1| polyprenyl synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287194|gb|ADI73160.1| Polyprenyl synthetase [Methanohalobium evestigatum Z-7303]
          Length = 288

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 19/218 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           RI   +D+L+       Q ++   +     Y   GGK+IR  ++     +   +  T++ 
Sbjct: 11  RITDAMDELIENMDDSSQIKN--VVSHVCNY---GGKRIRPIILMLSTDICGGDSKTSIN 65

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E +H  SLIHDDL  +D+G IRRG P+ H ++    A++ G+ L++ + E++SS 
Sbjct: 66  AALAVELMHSASLIHDDL--IDDGIIRRGVPSAHKKFGHSAAMLCGDFLISKSIELMSSY 123

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFA 192
                                   M  G+ +D    D    E   F     KT +L    
Sbjct: 124 GHNAITE----------FGQAGMSMAHGETIDLGGDDAGFVEVNYFDCIYKKTASLFAAC 173

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              GA ++ A      R R +GE +G  +Q+ DDLL+ 
Sbjct: 174 ASIGAYISGADDEMVHRCRLYGEYMGTAYQIVDDLLEY 211


>gi|238561270|ref|ZP_00442352.2| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4]
 gi|251766623|ref|ZP_04819732.1| polyprenyl synthetase [Burkholderia mallei PRL-20]
 gi|254178909|ref|ZP_04885563.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399]
 gi|254202791|ref|ZP_04909154.1| polyprenyl synthetase [Burkholderia mallei FMH]
 gi|254208133|ref|ZP_04914483.1| polyprenyl synthetase [Burkholderia mallei JHU]
 gi|254357663|ref|ZP_04973937.1| polyprenyl synthetase [Burkholderia mallei 2002721280]
 gi|147747038|gb|EDK54115.1| polyprenyl synthetase [Burkholderia mallei FMH]
 gi|147752027|gb|EDK59094.1| polyprenyl synthetase [Burkholderia mallei JHU]
 gi|148026727|gb|EDK84812.1| polyprenyl synthetase [Burkholderia mallei 2002721280]
 gi|160694823|gb|EDP84831.1| octaprenyl-diphosphate synthase [Burkholderia mallei ATCC 10399]
 gi|238524982|gb|EEP88412.1| octaprenyl-diphosphate synthase [Burkholderia mallei GB8 horse 4]
 gi|243065293|gb|EES47479.1| polyprenyl synthetase [Burkholderia mallei PRL-20]
          Length = 332

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 14  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 67  GALGENTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE +   + +
Sbjct: 125 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDEARYMQVIR 178

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 179 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 228


>gi|11465734|ref|NP_053878.1| prenyl transferase [Porphyra purpurea]
 gi|1709766|sp|P51268|PREA_PORPU RecName: Full=Prenyl transferase
 gi|1276734|gb|AAC08154.1| prenyl transferase [Porphyra purpurea]
          Length = 323

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           I+  L  +     S   T+H   L +A ++    GGK++R  +V   A   +        
Sbjct: 11  IEKELYSVEHNLKSVAGTRHP-ILYAAAKHLFEAGGKRLRPAIVLLVAKSTSEQQEIKPG 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D    RRG+ TVH  ++   A++AG+ L   +   +
Sbjct: 70  QRRLAEITEIIHTASLVHDDV--IDECSTRRGEKTVHKLFNTKIAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + ++++         QG++        D  I           KT +L+  
Sbjct: 128 ANIGNLEVVKVITKVITDFAEGEIRQGLV------HFDPSISIDDYIEKSFYKTASLVAA 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +C   A++   +      L  +G+++G+ FQ+ DD+LD   
Sbjct: 182 SCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAG 222


>gi|284037886|ref|YP_003387816.1| trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74]
 gi|283817179|gb|ADB39017.1| Trans-hexaprenyltranstransferase [Spirosoma linguale DSM 74]
          Length = 324

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 11/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + E    I   +D    +    M++     L   + Y +   GK++R   V   A +   
Sbjct: 5   VAEIQAPIAAEMDLFEQKFKGQMKSDVM-LLDQIMNYIVKRKGKQLRPMFVFLMAGVCGS 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 R  + IE +H  +L+HDD+  +D    RRG  +++  +    A++ G+ LL+  
Sbjct: 64  ITEATYRGASLIELLHTATLVHDDV--VDESNYRRGFFSINALWKNKVAVLVGDYLLSRG 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             ++ S      D +R   ++S       +G L  Q+   +   I E   + I + KT +
Sbjct: 122 --LLLSVDNNDFDLLR---IVSTAVRELSEGELL-QLYKARRLDITEDIYYEIIRQKTAS 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
           L+   C  GA  A       E+   FGE +GI FQ+ DDL D    ++ K
Sbjct: 176 LIAACCAVGARSAGIDPQVVEKAHAFGEKVGIAFQIKDDLFDYGTAEVGK 225


>gi|312115019|ref|YP_004012615.1| polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220148|gb|ADP71516.1| Polyprenyl synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 338

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 22/246 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA----------IRYAL-LG 49
           MN  L +++QE S      L+ LL      M   +N  L  A           R+ +  G
Sbjct: 1   MN--LAAQVQERSDP-SAALEPLLRLVHDEMGEVNNIILSQARSDVALIPELARHLINSG 57

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L    A +        + + A++E +H  +L+HDD+  +D   +RRGK +  +
Sbjct: 58  GKRLRPMLTIGAAKMCGYEGTGHIMLAASVEFMHTATLLHDDV--VDESDMRRGKKSARM 115

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   ++
Sbjct: 116 LWGNQASVLVGDFLLGQAFRMMVDVGS-----LGALKVLSEASSVIAEGEVW-QLAASKN 169

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E +   +   KT AL   A E GAI+ +    E+  LR +G N+G+ FQL DD LD
Sbjct: 170 LATTEEEYLNVIISKTAALFAAAAEIGAILTNRGPEEQAALRLYGTNIGLAFQLIDDALD 229

Query: 230 CEEDLP 235
              +  
Sbjct: 230 YSGEAA 235


>gi|254427009|ref|ZP_05040716.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
 gi|196193178|gb|EDX88137.1| polyprenyl synthetase superfamily [Alcanivorax sp. DG881]
          Length = 307

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/233 (34%), Positives = 118/233 (50%), Gaps = 11/233 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            L    +    R++  LD  L   ++        RL  A+RYA L GGK+IR  LV   A
Sbjct: 16  ALDQLTETAKARLEQALDHYLPAQSA------ASRLSQAMRYAALSGGKRIRPLLVYGAA 69

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +   A     A+E IH YSL+HDDLP+MD+  +RRG+ T H  +DE TAI+AG+ 
Sbjct: 70  QLAGASAAQADVPAVAVELIHAYSLVHDDLPAMDDDDLRRGQATCHKAFDEATAILAGDT 129

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMI 180
           L T AFE+++       D+ R  L+  L    G+ GM  GQM D+  Q +      +  +
Sbjct: 130 LHTRAFELLACHGDYRSDS-RIALIQHLCQAAGVDGMAAGQMQDMLAQGQQQTVAALEEM 188

Query: 181 QKMKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +KTG L+  + + G   A +        L  FG+ +G+ FQ+ DD+LD   
Sbjct: 189 HYLKTGRLITASLQLGYFAAENDDPALLSNLTDFGDAIGLAFQIQDDILDITA 241


>gi|190894247|ref|YP_001984541.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652]
 gi|190699908|gb|ACE93991.1| farnesyltranstransferase protein [Rhizobium etli CIAT 652]
          Length = 328

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 12/220 (5%)

Query: 17  DTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTAL 73
           D +++  L     + +       L  A+  A+  GG ++R  L  + + +    +   A 
Sbjct: 33  DKLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  + E  A++ G+ L+  AF+ +S 
Sbjct: 93  RAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYLS- 151

Query: 134 PKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
            +  L   + ++++  +   +G   G++ GQ +    E +    +      KTG+L   A
Sbjct: 152 LQAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFVAA 207

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              GA+ + A           GE LG  +Q+ADD+ D   
Sbjct: 208 ATCGALASGADP---APWSKVGELLGHAYQIADDIADTVG 244


>gi|54295495|ref|YP_127910.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens]
 gi|148358609|ref|YP_001249816.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str.
           Corby]
 gi|53755327|emb|CAH16823.1| hypothetical protein lpl2582 [Legionella pneumophila str. Lens]
 gi|148280382|gb|ABQ54470.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila str.
           Corby]
          Length = 322

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +  ++     +         +L+ T +    G +  Q+ +  
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMVEVGIKE-----ILNLLANTSHQITCGEVK-QLANRH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +     F + + KT  L   A   G I+ +A    +  L  +G +LG  FQL DD L
Sbjct: 155 NPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIEIRNSLYNYGLHLGNAFQLIDDAL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYCSDAA 221


>gi|257064654|ref|YP_003144326.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
           DSM 20476]
 gi|256792307|gb|ACV22977.1| geranylgeranyl pyrophosphate synthase [Slackia heliotrinireducens
           DSM 20476]
          Length = 364

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 15/237 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
                L   +  +  +++  + Q   + M     D LL+   Y+  GGK+ R  +     
Sbjct: 32  DFEEYLNVYADAVGDLVNTYIPQGMVADMDCYLYDPLLA---YSKNGGKRHRPLICLAAC 88

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +    +   AL   AAIE  H  +LIHDD+   D   +RRG+P +H+ Y    AI  G+ 
Sbjct: 89  AAVGGDVRKALSSAAAIEHFHTAALIHDDIA--DEATLRRGEPCLHLTYGMGLAINMGDL 146

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEF--IDETQV 177
            L+     +      L D+ + +++  L      +  + GQ +DI   +DE   I     
Sbjct: 147 GLSLVNGTVMKDPA-LDDHTKVRVVTELIE--MTRRTIEGQAMDIGWARDERYDISPENY 203

Query: 178 FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++   KT           GAI+  A++   E LR +G + G+ FQ+ DDLL+ E D
Sbjct: 204 LIMATHKTAHYSGAVPLAIGAIVGGATEGAIEALRNYGLDTGLAFQIQDDLLNIEGD 260


>gi|297620258|ref|YP_003708395.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044]
 gi|297375559|gb|ADI37389.1| putative geranyltranstransferase [Waddlia chondrophila WSU 86-1044]
          Length = 315

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 18/242 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           S L    K++DT +++ L              +  A  YAL  GGK++R  +    A   
Sbjct: 31  SLLTAYVKKVDTAIENHLDLLGP------PSPVRDACAYALSTGGKRVRPSITLMVADAL 84

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                  L    +IE  H  SL+ DD+PSMDN   RR +P+VH ++ E  A++   GL+ 
Sbjct: 85  GGMGDVTLS-ALSIEYFHTASLVVDDMPSMDNDDERRSQPSVHKKFGEAAALLVSYGLIG 143

Query: 126 YAFEIISSPKTQLKD---------NIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDET 175
             + +I+     L D         ++R +L L     N GL G  GGQ LDI+   +   
Sbjct: 144 AGYGMIAENGRLLLDQNIFFADSVDLRCRLALENASFNTGLNGATGGQFLDIRPPDLSTE 203

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  I  MKT +L   A  +G +    +  + ++++    + G+ FQ+ADDL D E+DL 
Sbjct: 204 TLKKIIHMKTSSLFEVAFVNGWLFGGGALEKLDQVKQAAAHFGLAFQIADDLGDMEQDLR 263

Query: 236 KK 237
            K
Sbjct: 264 NK 265


>gi|182436757|ref|YP_001824476.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326777352|ref|ZP_08236617.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465273|dbj|BAG19793.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326657685|gb|EGE42531.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 336

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A ++ +  GGK+ R  LV   +   + +    +     +E  H  +L HDD+  MD 
Sbjct: 42  ITEAAQHLVRAGGKRFRPLLVMLASQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDE 99

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P+ + ++    A++ G+ L   A  I++    +                   +
Sbjct: 100 ADVRRGVPSANTRWGNSVAVLTGDFLFARASHILADLGPEAV----------RIQAEAFE 149

Query: 158 GMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            ++ GQ+L+    +D          +   KTG+L+  +   GA+M+ A +   + L  +G
Sbjct: 150 RLVTGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVSGRFGAMMSGADERTVDVLTQYG 209

Query: 215 ENLGIIFQLADDLLDCEED 233
           E LGI FQLADD+LD   D
Sbjct: 210 ERLGIAFQLADDVLDIASD 228


>gi|260591948|ref|ZP_05857406.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319]
 gi|260536232|gb|EEX18849.1| decaprenyl diphosphate synthase [Prevotella veroralis F0319]
          Length = 326

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 12/221 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHL 70
            + I+  L D +    + +   H D LL  +   +    GK++R  L+   A  F     
Sbjct: 8   KQPIEAELVDFIDLFNNAL--DHEDGLLQMVLNHIKQRAGKRMRPILILLIAKNFGKVSS 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                   +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+ +L+ A   
Sbjct: 66  ITQHAAVGLELLHTASLVHDDV--VDEAAERRGQASVNADYDNKVAVLVGDYVLSTALLH 123

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +S   +++     ++L  +L+    L      Q+ +IQ++ + E   + I + KT AL  
Sbjct: 124 VSYTHSEMIVRRLAELGRTLSDGEIL------QLSNIQNKEVTEEVYYKIIERKTAALFE 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                GA  A A++ + E  R FG+NLGI+FQ+ DD+ D  
Sbjct: 178 TCAAIGAESAGATEEQVEAARLFGKNLGIVFQIRDDIFDYY 218


>gi|212704854|ref|ZP_03312982.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098]
 gi|212671696|gb|EEB32179.1| hypothetical protein DESPIG_02921 [Desulfovibrio piger ATCC 29098]
          Length = 321

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 15/225 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L ++L      I+  L     +   H        +  A      GGK++R  L    A L
Sbjct: 4   LKARLALELPPINKALSRA-AEGLPHPVRPIARHIFEA------GGKRLRPLLTILMARL 56

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      +   +E +H  +L+HDD+  +DN   RRGKP  H  ++  + I+AG+ +L
Sbjct: 57  LGYDKKDIYDLAVTMEMLHAATLLHDDV--LDNADTRRGKPAAHTIFNATSTILAGDAML 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
            +A  +++        + R  L  S   +    G +       Q E     +   I + K
Sbjct: 115 AHANALVAQCG-----DPRLCLCFSEATSRTAAGEILEIAAQHQVE-TTAEEYEEIIRGK 168

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T  L+  +C+ GA+ A A +   E    +GEN+G+ FQ+ DD LD
Sbjct: 169 TAWLIRASCQLGALRAGADEALVEAAAAYGENIGMAFQIVDDALD 213


>gi|313675096|ref|YP_004053092.1| polyprenyl synthetase [Marivirga tractuosa DSM 4126]
 gi|312941794|gb|ADR20984.1| Polyprenyl synthetase [Marivirga tractuosa DSM 4126]
          Length = 324

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 11/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           + SK++E    I T + +  ++    M+++    L   + Y +   GK++R   V   A 
Sbjct: 1   MGSKIKEIQSPIATEMAEFEIKFRQFMKSKVY-LLDKIMGYIVKRKGKQMRPMFVFLSAG 59

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +    +    R  A IE +H  +L+HDD+  +D+   RRG  +++  +    AI+ G+ L
Sbjct: 60  VHGQINEATYRGAALIELLHTATLVHDDV--VDDANYRRGFFSINALWKNKIAILVGDYL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L+    +    +      I S+ +  ++    L      Q+   +   I E   + I K 
Sbjct: 118 LSRGLLLSIDNEDFDLLKIVSEAVREMSEGELL------QIEKARKLNITEDIYYDIIKQ 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
           KT +L+   C  G+   +   +  E+++ FGE +G+ FQ+ DDL D    D+ K
Sbjct: 172 KTASLIASCCAVGSRSVNKDDDISEKMKLFGEKVGMAFQIKDDLFDYGTNDIGK 225


>gi|52842862|ref|YP_096661.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629973|gb|AAU28714.1| octaprenyl diphosphate synthase IspB [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 322

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  +V   ++         + + A +E  H  +L+HDD+  +D   +RRG+ T +
Sbjct: 43  GGKRLRPLVVLLASNACGYKGKDHISLAAMVEFFHTATLLHDDV--IDESTLRRGRQTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L T +  ++     +         +L+ T +    G +  Q+ +  
Sbjct: 101 SIWGSKASVLVGDYLFTQSVNLMVEVGIKE-----ILNLLANTSHQITCGEVK-QLANRH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +     F + + KT  L   A   G I+ +A    +  L  +G +LG  FQL DD L
Sbjct: 155 NPALTLDDYFDVIRAKTALLFAAAACIGPILTNAPIELRNSLYNYGLHLGNAFQLIDDAL 214

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 215 DYCSDAA 221


>gi|284928810|ref|YP_003421332.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A]
 gi|284809269|gb|ADB94974.1| solanesyl diphosphate synthase [cyanobacterium UCYN-A]
          Length = 323

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 11/220 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---NVNHLTA 72
           ++  L  L     S + T+H     +A      GGK IR  +V   +             
Sbjct: 11  VEDDLKLLRNNLKSLVGTRHPILSAAAEHLFDAGGKHIRPAIVLLVSKATMLEGDITPHH 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D   +RR  PTV+  +D   A++AG+ L   +   ++
Sbjct: 71  RRLAEITEMIHTASLVHDDI--VDEAVLRRNVPTVNSLFDNRIAVLAGDFLFAQSSWYLA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +        + S+++         QG+      +  D  +           KT +L+  +
Sbjct: 129 NLDNLQVVKLLSEVIRDFAEGEISQGI------NRFDTSLTLDSYLDKSYYKTASLIANS 182

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +S  I++++S +    +  +G  LG+ FQ+ DD+LD   
Sbjct: 183 AKSATILSNSSLDIINSIYTYGRCLGLAFQIVDDILDFTS 222


>gi|269955291|ref|YP_003325080.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269303972|gb|ACZ29522.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 343

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 26/236 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVT 59
           +  L ++L E    ++  L D +          + DRL   + + L   GGK++R FL  
Sbjct: 19  DPALAARLAERMAVVEQSLADAVA---------NADRLADDVAHHLVAAGGKRLRPFLTL 69

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               L +      +     +E  H  SL HDD+  MD+  +RRG P+VH  +    AI+ 
Sbjct: 70  LAGELGDGARTELVDAAVVVELTHLASLYHDDV--MDSAPLRRGAPSVHSVWGNSVAILV 127

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---Q 176
           G+ L   A   ++    +                   + +  GQ+ +       E     
Sbjct: 128 GDLLFARASARVAGLGPEAV----------RLQAETFERLCLGQLHETTGPAEGEDPAQH 177

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +   KT +L+  +   GA+   A   + E +  +GE +G+ FQ+ADD+LD   
Sbjct: 178 YLQVLADKTASLLATSARLGAMFGGAPAEQVEVVAAYGEKVGVAFQIADDVLDLAS 233


>gi|256820910|ref|YP_003142189.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582493|gb|ACU93628.1| Polyprenyl synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 326

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +            LL+ I Y +    GK++R   V   A +           R  + I
Sbjct: 17  LFEQKFRSSMSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKVSERTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDV--VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSIDNGDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D +R   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLLR---IISVAVREMSEGELL-QIEKARRLDIVEEVYYEIIRQKTATLIAACCAMGACS 188

Query: 200 AHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
               Q    E++R FGE +G+ FQ+ DDL D  ED + K
Sbjct: 189 VQPEQTELIEKMRLFGEYIGMAFQIKDDLFDYTEDAIGK 227


>gi|116874007|ref|YP_850788.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742885|emb|CAK22009.1| polyprenyl synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 326

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 21/231 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+  +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIEKNI----QIRDKHVEKNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMNVTVREYLTRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT  L   +C SGA  + AS+    +    G  LG+ FQ+ DD+LD   
Sbjct: 173 SGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTS 223


>gi|304407206|ref|ZP_07388859.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343647|gb|EFM09488.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 794

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 16/249 (6%)

Query: 1   MNGGLPSKLQENSKRIDTI------LDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKI 53
           M   L +  +   + ++T+      ++  L    S         L+ A  Y+L GG K++
Sbjct: 490 MVASLQTDRKSKDEFVETVRTVREQINSTLQIAKSEDIPPMKGTLIDAANYSLTGGGKRL 549

Query: 54  RSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           R  L        + +   + + +  ++E +H  SLI DDLPS DN   RRG+ T+H  +D
Sbjct: 550 RPILTWVMGVQQYGMRPESLVPLLRSLEYMHTASLIFDDLPSQDNAPTRRGRATLHEVHD 609

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF- 171
             TA + G  L+  A +  +S       ++ + +  S         +  GQ +D+  +  
Sbjct: 610 SATAELTGLLLIQRATQEQASLAQFDPRSVLALIRYSSQKAE---DLCAGQAMDLNAKGK 666

Query: 172 -IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +   Q+  I   KTG     A    AI+A A + E   L+ F  + GI FQ+ DDLLD 
Sbjct: 667 PLTLEQLNAICFYKTGIAFEAALVMPAILAQAPEQEIGLLKSFAYHAGIAFQIKDDLLDV 726

Query: 231 EED---LPK 236
           E D   L K
Sbjct: 727 EGDANLLGK 735


>gi|91773215|ref|YP_565907.1| polyprenyl synthetase [Methanococcoides burtonii DSM 6242]
 gi|91712230|gb|ABE52157.1| geranylgeranyl pyrophosphate synthetase [Methanococcoides burtonii
           DSM 6242]
          Length = 300

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 14/191 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKK+R  ++   + +             AIE IH  SLIHDD+  +D G +RRG  + H
Sbjct: 40  GGKKVRPIILLLASRICGKGSENCTNAALAIELIHSASLIHDDI--LDEGVMRRGVESAH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    A++AG+ +++ + E+IS   T +                    M  G+ +DI+
Sbjct: 98  KKFGPAAAMLAGDYMISKSIELISIYSTPVVQE----------FGRAGMAMAEGETIDIK 147

Query: 169 DEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
               D  E   F     KT +L   +   GA +A A +    +L+ +G  LG  +Q+ DD
Sbjct: 148 STSEDFAEMNYFDCIDKKTASLFAASAVMGAYIAGADEKTASKLKNYGRKLGRAYQIVDD 207

Query: 227 LLDCEEDLPKK 237
           LL+  +++  K
Sbjct: 208 LLEYTQNIDNK 218


>gi|218131733|ref|ZP_03460537.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697]
 gi|317474650|ref|ZP_07933924.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217986036|gb|EEC52375.1| hypothetical protein BACEGG_03354 [Bacteroides eggerthii DSM 20697]
 gi|316909331|gb|EFV31011.1| polyprenyl synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 324

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+N      L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLYNEVRPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  A   +   +     ++ S L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLTGDYLLATALVEVGMTRNYAIIDLVSNLGQDLAEGELL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT  L     ++GA+       + E  R FGE +G+ FQ+ DD+ D
Sbjct: 157 PEYSEEVYFDVIRKKTAVLFAACMKAGALSVGVDDEKAEYARLFGEYIGLCFQIKDDIFD 216

Query: 230 CEE--DLPK 236
             E  ++ K
Sbjct: 217 YYENKEIGK 225


>gi|256004586|ref|ZP_05429564.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM
           2360]
 gi|281417278|ref|ZP_06248298.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20]
 gi|255991458|gb|EEU01562.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum DSM
           2360]
 gi|281408680|gb|EFB38938.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum JW20]
 gi|316940696|gb|ADU74730.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
          Length = 318

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 18/222 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLL-SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
            I+  L  +LL+       +  +RLL  A+   +  GGK++R   V   +     N    
Sbjct: 8   EIEKEL--VLLEEFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKV 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +   AAIE +H  +LIHDD+  +D    RRG+ T+  ++    A+  G+ L T A  +++
Sbjct: 66  IPAAAAIEILHTATLIHDDV--VDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLA 123

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALM 189
               + + +I ++         G++ +  G++   Q ++  +T V+   K    KT  L 
Sbjct: 124 GNVPEKRLSILAK---------GIKAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLF 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             AC  GA +A   Q     L   G   G+ FQ+ DD+ +  
Sbjct: 175 SAACALGAYIAKCPQEVSRSLVKLGLYYGMAFQIKDDINNYT 216


>gi|299820943|ref|ZP_07052832.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601]
 gi|299817964|gb|EFI85199.1| heptaprenyl diphosphate synthase [Listeria grayi DSM 20601]
          Length = 326

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 12/229 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASL 64
           + +  N   +   L ++L+    +++ +  +    ++A+ ++  GGK +R   V   A  
Sbjct: 4   NAMWNNYPELQKDLKEVLVTIEKNIKIRDKNVAENINAMIHS--GGKLLRPAFVLLTAQA 61

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   ++ V +A+E +H  +LIHDD+  +D+  +RRG PT+H ++    A+  G+ L
Sbjct: 62  GPEYNVDRSIAVASALEVLHMATLIHDDV--IDDADMRRGVPTIHSKFGRKYAVYTGDYL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
               F+I+S+      D++ +    S      L G L  QM D+    +           
Sbjct: 120 FCVCFKILSAH----ADSVENIDFNSKNIEKILMGELN-QMKDLYHMNVTVKDYLTRISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   +C SGA+ + A +      +  G  +G+ FQ+ DD+LD   
Sbjct: 175 KTAQLFALSCYSGAVSSKAPRKTLYTAKNAGHFIGMAFQIIDDILDYTS 223


>gi|262199070|ref|YP_003270279.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365]
 gi|262082417|gb|ACY18386.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365]
          Length = 291

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 14/227 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           + + L E    ID  LD  L    S       +RLL A+RYA LG GK++R  L      
Sbjct: 25  VKNWLAEVRPEIDAYLDACLQIPGSAA----TERLLEAMRYAALGPGKRLRPALTLAACE 80

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +  +AL   AA+E +H Y+L+HDDLP MD+   RRG+PTVH+ YDE  A++AG+ L
Sbjct: 81  AVGGDRASALPAAAAVELLHTYTLVHDDLPCMDDDDERRGRPTVHVAYDEALAVLAGDAL 140

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFM 179
           L+ AF +++    +  D +            G   +L GQ+ D+  E  +E     ++  
Sbjct: 141 LSEAFGVLAKLGPRAGDAVAVL-----ARRAGTAELLAGQVHDLVIEAREEAPSFEELEA 195

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +   KTGAL   A E GAI   AS  ++  L  +G  +G+ FQ ADD
Sbjct: 196 LHAAKTGALFAAAVELGAIAGGASAEDRANLARYGLAIGVAFQHADD 242


>gi|320009184|gb|ADW04034.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 336

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L D   ++     T+    L+SA      GGK+ R  LV   
Sbjct: 13  DQALEADVQAGLAAVEAGLLDA-TKSEVPFITEAAQHLVSA------GGKRFRPLLVMLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +   + +    +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G+
Sbjct: 66  SQFGDPDAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSANTRWGNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A  I++    +                   + ++ GQ+L+    +D         
Sbjct: 124 FLFARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVDHYM 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  +   GA+MA A ++  + L  +GE LGI FQLADD+LD   D
Sbjct: 174 DVLGGKTGSLVAVSGRFGALMAGADESVVDILTQYGERLGIAFQLADDVLDIASD 228


>gi|254430804|ref|ZP_05044507.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001]
 gi|197625257|gb|EDY37816.1| solanesyl diphosphate synthase [Cyanobium sp. PCC 7001]
          Length = 323

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E    ++  LD LL    S +   H     +A      GGK++R  +V   +    
Sbjct: 2   ATVAELLHPVEADLDTLLADLRSLIGAGHPILQAAAEHLFAAGGKRLRPGIVLLLSRAVA 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +        R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  PDGELTPRHRRLAEITEMIHTASLVHDDV--VDEAATRRGVDTVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDDLDVVKLLSRVIMDLADGEVKQGLFR------YDTTQSFETYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  +  +  +++       + L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLIANSARAAGVLSGLPAPRLDDLYRFGRQLGLAFQVVDDILDFTG 222


>gi|255078126|ref|XP_002502643.1| predicted protein [Micromonas sp. RCC299]
 gi|226517908|gb|ACO63901.1| predicted protein [Micromonas sp. RCC299]
          Length = 452

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 25/231 (10%)

Query: 19  ILDDLLLQTASHMQT----------QHNDRLLSAIRYAL-LGGKKIRSFLVTECASL--- 64
           ++DD++    S M+           + N  LL+A       GGK++R  LV   A     
Sbjct: 130 VIDDIIAPVKSDMEQMRSNILDIVGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAQ 189

Query: 65  ---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               +       R+    E IH  SL+HDD+  +D+   RRG  T+H  Y    AI+AG+
Sbjct: 190 LMSMDDITERQRRLAEITEMIHTASLVHDDV--LDDCDTRRGAETIHTLYGTRVAILAGD 247

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   +   +++        + SQ++               Q   + +  +         
Sbjct: 248 FLFAQSSWYLANLDNLEVIKLISQVIADFADGEIS------QAGALFNCDVTLEGYLEKS 301

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT +L+  +C+S A+ +  S++ K  +  +G++LG+ FQ+ DD+LD  +
Sbjct: 302 HNKTASLIAASCKSAAVFSEVSEDVKMDMYEYGKHLGLAFQIVDDILDFTQ 352


>gi|315224101|ref|ZP_07865941.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287]
 gi|314945834|gb|EFS97843.1| octaprenyl-diphosphate synthase [Capnocytophaga ochracea F0287]
          Length = 326

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +            LL+ I Y +    GK++R   V   A +           R  + I
Sbjct: 17  LFEQKFRSSMSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVSGGKVSERTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDV--VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSIDNGDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D +R   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLLR---IISVAVREMSEGELL-QIEKARRLDIVEEVYYEIIRQKTATLIAACCAMGACS 188

Query: 200 AHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
               Q    E++R FGE +G+ FQ+ DDL D  ED + K
Sbjct: 189 VQPEQTELIEKMRLFGEYIGMAFQIKDDLFDYTEDAIGK 227


>gi|167764030|ref|ZP_02436157.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC
           43183]
 gi|167698146|gb|EDS14725.1| hypothetical protein BACSTE_02413 [Bacteroides stercoris ATCC
           43183]
          Length = 324

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+N      L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLAAKLYNEICPATLHAAVALELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  A   +   +     +I S+L   L     L      Q+ ++ +
Sbjct: 103 VFNNKVAVLTGDYLLATALVEVGMTRNYGIIDIVSKLGQDLAEGELL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT  L     ++GA+   A   + E  R FGE +G+ FQ+ DD+ D
Sbjct: 157 PEYSEDIYFDVIRKKTAVLFAACMKAGALSVGAGDEKAEYARLFGEYIGLCFQIKDDIFD 216

Query: 230 CEE--DLPK 236
             E  ++ K
Sbjct: 217 YYESKEIGK 225


>gi|62955289|ref|NP_001017656.1| decaprenyl-diphosphate synthase subunit 1 [Danio rerio]
 gi|62202649|gb|AAH93175.1| Prenyl (decaprenyl) diphosphate synthase, subunit 1 [Danio rerio]
          Length = 411

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 17/234 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF 65
           +KL++    +   L ++       +     + L +   Y   G GK  R  +V   A   
Sbjct: 86  AKLKDPFSLVQKDLQNIYDDIKQQLLVSKAE-LKALCDYYFDGKGKAFRPMIVILMARAC 144

Query: 66  NVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           NV+             +    E IH  SL+HDD+  +D+   RRGK T++  + E  AI+
Sbjct: 145 NVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDV--IDDSDKRRGKNTINNVWGERKAIL 202

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
           AG+ +L+ A   ++        ++ SQ++  L     +      Q+   ++E        
Sbjct: 203 AGDFILSAASMALARIGNTTVVSVLSQVIEDLVRGEFM------QLGSKENENERFKHYL 256

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                KT +L+  +C++ +I+ ++     E    +G N+GI FQL DD+LD   
Sbjct: 257 EKTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTS 310


>gi|84043358|gb|ABC50110.1| geranylgeranyl pyrophosphate synthase [Brevundimonas vesicularis]
          Length = 298

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 8/216 (3%)

Query: 21  DDLLLQTASHMQ---TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
           DDL LQ  + +      H+  L +A R ALLG GK++R  L    A+    +   AL   
Sbjct: 20  DDLRLQVQARLAEVAPAHDGLLSTAAREALLGRGKRVRPVLAMLAAAHVGGDPEDALEYA 79

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E +H  SL+ DDLP MD+  +RRG+PT+H ++ E TA++A   LL  A  ++     
Sbjct: 80  CALEMVHAASLVLDDLPCMDDASLRRGQPTLHHRHGEDTAVLAAVALLNQATRLVLQTAA 139

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACE 194
             +  + +  +L  T  IG  G+  GQM D++D+  D  E+ +  I  +KTGAL      
Sbjct: 140 PAETRLAALDLL--TQAIGFDGLSEGQMRDLRDDARDRDESALRQINDLKTGALFVATVR 197

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            G ++      +  RL  FGE +G  FQL DDLLD 
Sbjct: 198 GGGLLGGGDAQDLARLSIFGEAIGFAFQLCDDLLDV 233


>gi|221068969|ref|ZP_03545074.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
 gi|220713992|gb|EED69360.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
          Length = 309

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 106/219 (48%), Gaps = 15/219 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + +D ++   L  T+  +  Q +  +++A      GGK++R  L+   A           
Sbjct: 2   REVDIVIAQRLT-TSVPLIAQISQYIIAA------GGKRLRPALLLLIAGALGHQGKNKY 54

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L T +F+++  
Sbjct: 55  ILAAVVELIHTATLLHDDV--VDESTLRRGRATANETFGNPASVLVGDFLHTRSFQMMVE 112

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             +     +R   +LS   N+  +G +  Q+++  D  ++E     + + KT  L   + 
Sbjct: 113 VGS-----MRVLQILSDATNVIAEGEV-QQLINTHDASLNEAGYLHVIRSKTAQLFEASA 166

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  A++A A+   ++    +G+ LG  FQ+ DD+LD   
Sbjct: 167 QLAAVLAGATPEMEQACATYGQALGTAFQIIDDVLDYTG 205


>gi|148655833|ref|YP_001276038.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
 gi|148567943|gb|ABQ90088.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
          Length = 349

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 10/235 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVT 59
              +P  L +  +R D + D   ++     +T     LL+A   Y +  GGK++R+ LV 
Sbjct: 22  TRTMPIGLGDILRRADLLSDMAEVERQMLARTASRSPLLTAAGTYTVAAGGKRLRAALVL 81

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L   +   AL    AIE +H  SLIHDDL  +D+   RRG  TVH ++D   A++ 
Sbjct: 82  LSARLGAYDPGRALHPAIAIELLHAASLIHDDL--VDHAGQRRGHVTVHTRWDADVALLL 139

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L        ++ +   + + R     +      ++G L   +  ++       Q + 
Sbjct: 140 GDYLFAL-----AANELAAEPDPRIIAFYTSAAQTMVEGELN-PVTHVEPLATAVEQYYR 193

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
               KT  L   AC++G  +A   + + + L  FG +LG+ FQ+ DD+LD   D 
Sbjct: 194 KIGRKTAVLFEAACKAGIAVAGGDEEQIDALGRFGYDLGLAFQIVDDVLDYTGDE 248


>gi|282879099|ref|ZP_06287859.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
 gi|281298833|gb|EFA91242.1| polyprenyl synthetase [Prevotella buccalis ATCC 35310]
          Length = 325

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
            L    + I   L+D      +   +  +  L  A+ +     GK++R  L+   A  FN
Sbjct: 3   YLSLIQQPIVDELNDF-DYLYNESLSHGDGLLSQALSHIRQRKGKRMRPMLILLIAKNFN 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A      +E +H  SL+HDD+  +D    RRG+ +V+  YD   A++ G+ +L+ 
Sbjct: 62  GVTSIAQHAAVGLELLHTASLVHDDV--VDESGERRGQASVNATYDNKVAVLVGDYILST 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   +S   ++      + L  +L++   L      Q+ +IQ++ I E   + + K KT 
Sbjct: 120 ALLQVSFTHSEAIIQNLANLGRTLSNGEIL------QLSNIQNQDISEEVYYQVIKQKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
           AL       GA    A+  E E  R FG+ LGIIFQ+ DD+ D  E  ++ K
Sbjct: 174 ALFESCAVIGAQAGKATPEEVEAAREFGQTLGIIFQIRDDIFDYFESKEIGK 225


>gi|77464716|ref|YP_354220.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
 gi|77389134|gb|ABA80319.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 289

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 91/237 (38%), Positives = 136/237 (57%), Gaps = 15/237 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
                L + + R+   LD  L         + +  ++ A+RYA+ GGK++R FLV E A 
Sbjct: 2   SFSKALTDAAARVQGRLDAALAD-------REDLPVVHAMRYAVQGGKRLRGFLVLESAR 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  +    A+   A+IE +H YSL+HDD+P MD+  +RRG PTVH ++DE TA++AG+ L
Sbjct: 55  LHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRRGLPTVHRKWDECTAVLAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179
            T AFE+++ P       +R +L+ SL    G +GM+ GQ LDI  E     +   Q+  
Sbjct: 115 QTLAFELLADPALG-PAAVRIELVASLAKASGAEGMVLGQALDIAAETAAVPLTLDQITH 173

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +Q  KTGAL+ ++ E+GAI+  A    +  LR +   LG+ FQ+ADD+LD E D  K
Sbjct: 174 LQAGKTGALIRWSAEAGAILGQAD---RVPLRRYATALGLAFQIADDILDVEGDAEK 227


>gi|125973083|ref|YP_001036993.1| trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC
           27405]
 gi|125713308|gb|ABN51800.1| Trans-hexaprenyltranstransferase [Clostridium thermocellum ATCC
           27405]
          Length = 318

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 18/222 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLL-SAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
            I+  L  +LL+       +  +RLL  A+   +  GGK++R   V   +     N    
Sbjct: 8   EIEKEL--VLLEKFIQKNIRSRNRLLNEAVSSIVKSGGKRLRPAFVILASQFGKYNRKKV 65

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +   AAIE +H  +LIHDD+  +D    RRG+ T+  ++    A+  G+ L T A  +++
Sbjct: 66  IPAAAAIEILHTATLIHDDV--VDRTKFRRGQVTISEKFGVDMAVYVGDYLYTKAVLLLA 123

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALM 189
               + + +I ++         G++ +  G++   Q ++  +T V+   K    KT  L 
Sbjct: 124 GNVPEKRLSILAK---------GIKAICEGEVDQYQHKYSIDTSVYTYLKRIGRKTAVLF 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             AC  GA +A   Q     L   G   G+ FQ+ DD+ +  
Sbjct: 175 SAACALGAYIAKCPQEVSRSLVKLGLYYGMAFQIKDDINNYT 216


>gi|134280083|ref|ZP_01766794.1| polyprenyl synthetase [Burkholderia pseudomallei 305]
 gi|134248090|gb|EBA48173.1| polyprenyl synthetase [Burkholderia pseudomallei 305]
          Length = 309

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 29  AGGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTA 86

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++
Sbjct: 87  NALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNM 140

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD 
Sbjct: 141 HDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDW 200

Query: 228 LDCEE 232
           LD   
Sbjct: 201 LDYAG 205


>gi|116622453|ref|YP_824609.1| geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076]
 gi|116225615|gb|ABJ84324.1| Geranyltranstransferase [Candidatus Solibacter usitatus Ellin6076]
          Length = 333

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L+   A L      +A+++GA +E IH  +L+HDD+  +D    RRG+P+ 
Sbjct: 51  AGGKRLRPALLLLSAKLVGNGGPSAIQLGAVVELIHAATLVHDDV--IDTAQTRRGRPST 108

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           ++++   T ++AG+ L   AF+I    ++    ++   L   +     LQ    G++   
Sbjct: 109 NVKWGNHTCVLAGDWLYMQAFQIALRERSFQMLDLLIGLTQMMVEGELLQLERIGRI--- 165

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + E     +   KT  L       G +  H     +E+L  +  NLG+ FQL DD+
Sbjct: 166 ---NVSEADCMELVDRKTACLFSVCARLGGLCGHTDPQTQEKLGEYAWNLGMAFQLVDDV 222

Query: 228 LDCEE 232
           LD   
Sbjct: 223 LDFTS 227


>gi|254391153|ref|ZP_05006360.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294814410|ref|ZP_06773053.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326442800|ref|ZP_08217534.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197704847|gb|EDY50659.1| isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294327009|gb|EFG08652.1| Isoprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 336

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 15/233 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            GL  + Q     +   L  +        +++      +A      GGK+ R  LV   A
Sbjct: 7   FGLSVRDQALEADVHNGLSAVEAGLLDATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              +      +     +E  H  +L HDD+  MD   +RRG P+ + ++    A++ G+ 
Sbjct: 67  QFGDPYSPGVVPAAVVMELTHLATLYHDDV--MDEADVRRGVPSANARWGNSVAVLTGDF 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFM 179
           L   A  I++    +                   + ++ GQ+L+    ++          
Sbjct: 125 LFARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPREGGDPIEHYLD 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KTG+L+  +   GA+MA A +   + L  +GE LG+ FQLADD+LD   
Sbjct: 175 VIGGKTGSLIAVSGRIGAMMAGADERIVDTLTQYGERLGVAFQLADDVLDIAS 227


>gi|291298290|ref|YP_003509568.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290567510|gb|ADD40475.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 346

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/187 (33%), Positives = 92/187 (49%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV  CA     + + AL    A+E +H +SL+HDD+  +D    RR +PT   
Sbjct: 62  GKAIRPALVLLCARAVGSSDIEALPAAVAVELVHNFSLVHDDV--IDRDVTRRHRPTAWS 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            + +  AI+AG+ + T A  +++           + +      N  +Q ++ GQ  D+  
Sbjct: 120 VFGDGAAILAGDAMSTLACAVLADSGHP------AAMDGIKLVNRAIQELIDGQHADVSF 173

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E    ID  +   +   KTGAL+  AC  GA     S ++ ERLR FG +LG+ FQ  DD
Sbjct: 174 ETREQIDPQECRAMAAAKTGALLGCACAIGARFGGGSPHQVERLRAFGTDLGLAFQHVDD 233

Query: 227 LLDCEED 233
           LL    D
Sbjct: 234 LLGIWGD 240


>gi|308388198|pdb|3OYR|A Chain A, Crystal Structure Of Polyprenyl Synthase From Caulobacter
           Crescentus Cb15 Complexed With Calcium And Isoprenyl
           Diphosphate
 gi|308388199|pdb|3OYR|B Chain B, Crystal Structure Of Polyprenyl Synthase From Caulobacter
           Crescentus Cb15 Complexed With Calcium And Isoprenyl
           Diphosphate
          Length = 345

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 18/224 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           ++ ++ D + Q+   +     + L++A      GGK++R  +    A L   ++    ++
Sbjct: 38  VNRLITDRM-QSDVAIIPALAEHLIAA------GGKRLRPLMTVAAARLAGADNDHFQKL 90

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E IH  +L+HDD+  +D   +RRGK   H+ +    +++ G+ L   AFE++    
Sbjct: 91  AAAVEFIHTATLLHDDV--VDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETN 148

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           +     +++  +L+    +  +G +  Q++   D  + +     I + KT  L   A E+
Sbjct: 149 S-----MKALEILARASRVIAEGEVL-QLMRSHDLNLSQAVYLEIIQAKTAELFAAASEA 202

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GA+ A     + E LR +G NLG+ FQLADD LD     E L K
Sbjct: 203 GAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGK 246


>gi|315505424|ref|YP_004084311.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315412043|gb|ADU10160.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 339

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 8/211 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
            LL         +  D+L + +RYALL  GK +R  +    A     +    L      E
Sbjct: 23  RLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAAEAVGGSPRDVLAAALGTE 82

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +L+HDD+  +D   +RRG+P V + Y    AI+AG+ L+ +AF+ +      +  
Sbjct: 83  YLHVATLVHDDI--IDADTLRRGRPAVPVAYSIPGAIVAGDHLIFHAFQAMVESGRAVPA 140

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGA 197
                 + +L      Q +  GQ L+ +   D          + ++KTG+L    C  GA
Sbjct: 141 ASVVSAVTALAEA--GQDLCRGQALEARLVGDLDAGARWYPEMIRLKTGSLFRAVCHIGA 198

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           ++  A       L  +GE++G  FQ+ DDLL
Sbjct: 199 LLGGADPLVASALARYGEHVGTAFQIRDDLL 229


>gi|297203852|ref|ZP_06921249.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
 gi|197711907|gb|EDY55941.1| polyprenyl synthatase [Streptomyces sviceus ATCC 29083]
          Length = 378

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 87  GGKAVRPALAVLSAEVTGAAPETGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGTVEAG--RATRRLTTATRALIDGQAQDISYEHR 202

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 203 DR-VSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLEKYGYHLGLAFQAVDDLL 261

Query: 229 DCEED 233
               D
Sbjct: 262 GIWGD 266


>gi|328884333|emb|CCA57572.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or
           Geranyltranstransferase (farnesyldiphosphate synthase)
           or Geranylgeranyl pyrophosphate synthetase [Streptomyces
           venezuelae ATCC 10712]
          Length = 336

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            GL  + Q     + T L  +        ++       +A    L GGK+ R  LV   A
Sbjct: 7   FGLSVRDQALEADVQTGLAAVEAGLLDATKSDVPFITEAAQHLVLAGGKRFRPLLVMLAA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G+ 
Sbjct: 67  QFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSANTRWGNSIAVLTGDF 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFM 179
           L   A   ++    +               +   + ++ GQ+L+                
Sbjct: 125 LFARASHTLADLGPEAV----------RIQSEAFERLVTGQILETAGPQEGRDPVDHYLD 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   KTG+L+  +C  GA+MA A ++  + L  +GE LG+ FQLADD+LD   D
Sbjct: 175 VLGGKTGSLVAVSCRFGAMMAGADESVVDILTQYGERLGVAFQLADDVLDIASD 228


>gi|300711100|ref|YP_003736914.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3]
 gi|299124783|gb|ADJ15122.1| Dimethylallyltranstransferase [Halalkalicoccus jeotgali B3]
          Length = 347

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 33/248 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   + E  +R++  +++        +     +RL  A RY L  GGK++R  ++   A
Sbjct: 8   SVTEAVAERRERVNRAIEE-------ELPIARPERLYEASRYLLDAGGKRLRPAVLLLTA 60

Query: 63  SLF----------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
                              + + +  LR   +IE I  ++LIH     MD+  +RRG P+
Sbjct: 61  EALCDVAPLSTDYREFPTLDGDTVDVLRAAVSIETIQSFTLIH--DDIMDDDDLRRGVPS 118

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           VH +YD  TAI+AG+ L + AFEI+         ++++   L+ T       +  GQ LD
Sbjct: 119 VHREYDLETAILAGDTLYSKAFEIMLESGAHPGRSLKALRTLAST----CTRICEGQSLD 174

Query: 167 ---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               + E + E++   + ++KT  L   A    A +  A     E L  +G ++G  FQ+
Sbjct: 175 VEFERREDVSESEYLEMIELKTAVLYGSATSVPADLLGADDRTVEALYRYGIDIGKAFQI 234

Query: 224 ADDLLDCE 231
            DD+LD  
Sbjct: 235 QDDVLDLT 242


>gi|255020838|ref|ZP_05292894.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969629|gb|EET27135.1| Trans-hexaprenyltranstransferase [Acidithiobacillus caldus ATCC
           51756]
          Length = 322

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 10/208 (4%)

Query: 30  HMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           H Q Q     + A+   L   GGK++R  ++   A +        + + A +E IH  +L
Sbjct: 22  HEQIQSGVPTIPAMGAYLINAGGKRLRPIILLLAARMGGERGPRPIPLAAVVEFIHSATL 81

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RR   T +  +    A++ G+ L   +FE++         ++R    
Sbjct: 82  LHDDV--VDGSELRRNHATANQLWGNAAAVLVGDFLYARSFEMMVEDG-----DMRIMAT 134

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           ++   ++  QG +  Q+ +  D  +D    F +   KT  L   A   GAI+      ++
Sbjct: 135 MAEATSVISQGEVA-QLENADDPDLDAEAYFAVIAAKTAKLFEAAARIGAIVNAMEPEQE 193

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L  +G  +G+ FQL DD LD + +  
Sbjct: 194 LALARYGSLVGVAFQLMDDALDYQAEAA 221


>gi|68536956|ref|YP_251661.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
           K411]
 gi|68264555|emb|CAI38043.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
           K411]
          Length = 353

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 23/236 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   L ++ ++++ +L D L    S + T     L  A      GGK+ R       
Sbjct: 33  DAQLNEALGQSMQQVEQLLKDRLSVGESFL-TDKISHLFEA------GGKRFRVMFALLA 85

Query: 62  ASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A          +    A +E  H  +L HDD+  MD    RRG  + + +++   AI+AG
Sbjct: 86  AHYGEKPTAQEVHEAAAVVELTHLATLYHDDV--MDESDQRRGAESANKRWNNSVAILAG 143

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQV 177
           + L   A EI+++   Q                   Q ++ GQM +    +D   +    
Sbjct: 144 DYLFAIASEIMATLGAQ----------TVQHFAETFQELVTGQMRETIGARDGEDEIEHY 193

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + + KTG L+  A   GA+ + AS+  +E L  FG N+G IFQ+ DD++D   D
Sbjct: 194 LTVIQEKTGVLIASAGWLGALHSGASEEHREALFRFGRNVGQIFQIVDDIIDIWAD 249


>gi|293390542|ref|ZP_06634876.1| heptaprenyl diphosphate synthase component II [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951076|gb|EFE01195.1| heptaprenyl diphosphate synthase component II [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 329

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     +   A+     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARALGFDGQQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILRIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A A   +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGADDTQEKALQNYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|195953287|ref|YP_002121577.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932899|gb|ACG57599.1| Polyprenyl synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 312

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 22/232 (9%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S L    KRI+  L + L  +   +    N  + +       GGK+IR  L+        
Sbjct: 5   SGLDSIRKRIELALSENLDSSVDTILKAGNSTIEA-------GGKRIRPLLLVYLVESLG 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A+ +G  IE IH  SL+HDD+  +D    RRGKP+V+  + +  A++ G+ L   
Sbjct: 58  GDVDKAIILGCGIEYIHIASLLHDDV--VDKADSRRGKPSVNKVFGQEAAVLTGDYLYAK 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMK 184
           A  + ++       +I S+          +  M  GQ+L+++     IDE   F I   K
Sbjct: 116 ALFLYANYGNAKMIDILSK---------AVMNMAEGQLLELKSIGSIIDEKTYFDIIDGK 166

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T  L+      GA++++    E E+    G  LG  FQL DD LD E D  K
Sbjct: 167 TAYLIGACFGVGALISNY--EEYEKFFDIGLKLGRAFQLIDDALDYEVDSQK 216


>gi|294496201|ref|YP_003542694.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Methanohalophilus mahii DSM 5219]
 gi|292667200|gb|ADE37049.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Methanohalophilus mahii DSM 5219]
          Length = 321

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 17/231 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECA 62
            L  +L++ S  +D  + + L          H + L  A RY    GGK++R  ++   A
Sbjct: 2   DLIDELKKRSTLVDESIQEFL-------PIDHPEELYRATRYLPDAGGKRLRPAVLMLSA 54

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +  + L    A+E IH ++LI      MD   IRRG P +H+++    AI+AG+ 
Sbjct: 55  EAVGGDSDSVLPAAVALELIHNFTLI--HDDIMDRDDIRRGMPALHVKWGTAGAILAGDT 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           L + AFEIIS      +  ++   +LS T       +  GQ LD+  E    +D  +   
Sbjct: 113 LYSRAFEIISKMDADPQKLLKCVALLSRT----CTKICEGQWLDVDFEKRDIVDVDEYLE 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           + + KT  L   A + GAI+  AS    + +  FG   GI FQ+ DD++D 
Sbjct: 169 MIENKTSVLYGAAAKVGAILGGASDEVADAMYEFGRLTGISFQIHDDVIDL 219


>gi|332886110|gb|EGK06354.1| hypothetical protein HMPREF9456_00228 [Dysgonomonas mossii DSM
           22836]
          Length = 323

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +N R+   I + +   GK+IR  L+   A      +         +E +H  SLIHDD+ 
Sbjct: 29  NNVRIQEIIDHIMKSDGKRIRPILLLLAAKACGEINNITYNAAITVELLHTASLIHDDV- 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D   IRRGK +++  YD   A++AG+  L+ A       K+ L  NI     +S    
Sbjct: 88  -VDESKIRRGKASLNAIYDNKMAVLAGDYFLSTAL-----IKSVLTGNIEIISNISDLGR 141

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
              +G L  Q+  +++  IDE + F + K KT +LM      GAI  +AS+ E E+    
Sbjct: 142 DLAEGELN-QLSLVKELIIDEDEYFQVIKKKTASLMSVCMRIGAISVNASEEEIEKFTRL 200

Query: 214 GENLGIIFQLADDLLDCEED-LPK 236
           GE  G+ FQL DD+ D   D + K
Sbjct: 201 GELFGLCFQLRDDIFDYFTDAIGK 224


>gi|261868528|ref|YP_003256450.1| octaprenyl-diphosphate synthase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413860|gb|ACX83231.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase)
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 329

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A     +   A+     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARALGFDGQQAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILRIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A A   +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIAGADDTQEKALQNYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|325955525|ref|YP_004239185.1| trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922]
 gi|323438143|gb|ADX68607.1| Trans-hexaprenyltranstransferase [Weeksella virosa DSM 16922]
          Length = 325

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 16/214 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L +       + N  LL  I Y +    GK++R   V   A +    +    R  + IE 
Sbjct: 18  LFEDKFFESMKSNVSLLDRITYYIVRRKGKQMRPMFVFLIAKMLGEVNEKTYRAASFIEL 77

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  +L+HDD+  +D+ ++RRG  +++  +    A++ G+  L+    IIS+        
Sbjct: 78  IHTATLVHDDV--VDDSHMRRGFFSLNALWKNKIAVLVGDYFLSKTL-IISTQNKDFD-- 132

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAI 198
                 L  T ++ ++ +  G++L I+      I E   F I +MKT  L+   C++GA+
Sbjct: 133 ------LLETVSVAIKEISEGELLQIEKARKLDITEEVYFEIIRMKTATLIAACCKAGAL 186

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +     ERL  FGE +GI FQ+ DDL D  +
Sbjct: 187 SVSSDNMVAERLHKFGELVGIAFQIKDDLFDYTQ 220


>gi|86136864|ref|ZP_01055442.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193]
 gi|85826188|gb|EAQ46385.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. MED193]
          Length = 287

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 19/240 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M       LQ+  + I   L+ ++   A+         L   + +A+LGGK +R FLV E
Sbjct: 1   MAVQFTVALQQAQQEISARLNTIIPVGAT---------LGKPMLHAVLGGKMLRGFLVLE 51

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L  V+   AL    AIECIH YSL+HDDLP MD+  +RRG PT+H ++DE TA++ G
Sbjct: 52  SARLHGVDAEAALDAAVAIECIHAYSLVHDDLPCMDDDDLRRGLPTIHKKWDEATAVLTG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQ 176
           + L T AF++++  K         +L+  L    G  GM+ GQMLDI  E     +   Q
Sbjct: 112 DALQTLAFDLLADSKFGPNA---LELIRLLARAAGRSGMVQGQMLDIDAETASTPLTLEQ 168

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +Q  KTG L+ ++   G ++A    ++   L  +   LG+ FQ+ADD+LD E D  K
Sbjct: 169 ITRLQDRKTGCLINWSATVGPVIAG---DDSRALWQYATALGLAFQIADDILDIEGDAEK 225


>gi|168046685|ref|XP_001775803.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672810|gb|EDQ59342.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 17/229 (7%)

Query: 13  SKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLF 65
           +  ++ + DDL  L      +    N  L++A +     GGK++R  LV         L 
Sbjct: 23  ADLVNPVSDDLRLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQLS 82

Query: 66  NVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           N+        R+    E IH  SLIHDD+  +D    RRGK TVH  +    A++AG+ +
Sbjct: 83  NIQELRPQHRRLAEITEMIHTASLIHDDV--LDESDTRRGKETVHQTFGTRVAVLAGDFM 140

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              +   +++        + SQ++               Q  ++ D  +           
Sbjct: 141 FAQSSWYLANLDNLEVIKLISQVIRDFASGEI------KQAQNLFDTEVTLQNYLDKSYY 194

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +L+  + +S AI + ++ +    +  +G +LG+ FQ+ DD+LD  +
Sbjct: 195 KTASLIASSTKSAAIFSDSTPSVSNAMFDYGMHLGLAFQVVDDILDFTQ 243


>gi|297842625|ref|XP_002889194.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
 gi|297335035|gb|EFH65453.1| solanesyl diphosphate synthase [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L      +    N  L+SA       GGK++R  LV       A L  + 
Sbjct: 88  FELVADDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLK 147

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+   IE IH  SLIHDD+  +D   +RRGK TVH  +    A++AG+ +   
Sbjct: 148 ELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQ 205

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   +++ +      + SQ++               Q   + D         +    KT 
Sbjct: 206 ASWYLANLENLQVIKLISQVIKDFASGEI------KQASSLFDCDAKLDDYLLKSFYKTA 259

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +    +  E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 260 SLVAASTKGAAIFSRVETDVTEQMYEFGKNLGLSFQIVDDILDFTQ 305


>gi|284162554|ref|YP_003401177.1| polyprenyl synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012551|gb|ADB58504.1| Polyprenyl synthetase [Archaeoglobus profundus DSM 5631]
          Length = 293

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 17/223 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            +  + I+  L+ L+    +        ++  A+++ +  GGK+ R  +V   A L   +
Sbjct: 5   WQEYRLINNELERLVNSVNTI------PKVKKALKHVISAGGKRTRPLIVLLSAKLCGGD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +   + +  A+E IH  SL+HDD+  +D G +RR    +H++YD   AI+ G+ L++ + 
Sbjct: 59  YKDVMDMALAVELIHTASLVHDDI--IDRGVMRRNVKALHVEYDISLAILVGDWLISKSV 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E++S           SQ++        +        +    E   E   F     KT +L
Sbjct: 117 ELVSKYP--------SQIIKEFAKTGMMMSEGEVLDVYSPYERFTEDTYFKCITFKTASL 168

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +  ++ A++    +   E++  +G NLGI +QL DDLL+  
Sbjct: 169 FAYGAKNSAMVVCDDEKAWEKMFEYGLNLGIAYQLVDDLLEYM 211


>gi|167842012|ref|ZP_02468696.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis MSMB43]
          Length = 330

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 12  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 226


>gi|329893636|ref|ZP_08269770.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
 gi|328923563|gb|EGG30875.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC3088]
          Length = 320

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 9/190 (4%)

Query: 45  YALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           Y + GG K++R  L     +             A IE +H  +L+HDD+  +D   +RRG
Sbjct: 36  YIVAGGGKRMRPLLALLTGAALGGISQPHKHFAAVIEFLHTATLLHDDV--VDVSSLRRG 93

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +PT +  Y   ++++ G+ + + AF+++ +       ++R    ++ T N   +G +  Q
Sbjct: 94  RPTANAAYGNASSVLVGDFIYSRAFQLLVNIG-----DMRILKDIADTTNRIAEGEVL-Q 147

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           ++   D    ETQ + + + KT  L   AC  GA+++ AS+ + E LR FG NLGI FQ+
Sbjct: 148 LVRAGDADTTETQYYEVIQAKTAVLFGAACYGGALLSGASERKAEELREFGINLGIAFQI 207

Query: 224 ADDLLDCEED 233
            DD+LD + D
Sbjct: 208 VDDILDYQGD 217


>gi|78065141|ref|YP_367910.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383]
 gi|77965886|gb|ABB07266.1| trans-hexaprenyltranstransferase [Burkholderia sp. 383]
          Length = 331

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 13  AHLLAPITSDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 66  GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + +
Sbjct: 124 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|218290932|ref|ZP_03494989.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239097|gb|EED06300.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 321

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 15/220 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
             R++ +LD+      + +       LL A      GGK+IR      C           
Sbjct: 14  LDRVERLLDERAHADHADLAKAGRT-LLEA------GGKRIRPLFALICGLGEREWSEDV 66

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            +V AA+E IH  +L+HDD+  +D   +RRG+PTV   Y  + A+  G+ L   A ++++
Sbjct: 67  AKVAAALEMIHMATLVHDDV--IDRADLRRGRPTVRKSYGNLAAMYTGDYLFARAIQLLA 124

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                    + ++ ++ L            Q+ D  +              KT  L+  +
Sbjct: 125 EVDNLEVHRLMARGIVLLCEGEI------EQIQDFYNWSQGVMTYLRRIHRKTALLISLS 178

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           C+ GA++  A + E   L  FG  +G+ FQ+ DDLLD   
Sbjct: 179 CQLGAMVGGAHKREVAALARFGHAVGMAFQIVDDLLDFTG 218


>gi|257899830|ref|ZP_05679483.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15]
 gi|257837742|gb|EEV62816.1| trans-hexaprenyltranstransferase [Enterococcus faecium Com15]
          Length = 328

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 22/237 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  +L E  KR++        +T           +   I     GGK +R       + 
Sbjct: 12  ALSKELTETLKRME--------ETVRLKNKPVEQAIKETIH---AGGKLLRPAYQLLFSQ 60

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ + A+IE +H  +LIHDD+  +D   +RR +P +  Q+  V ++ AG+ 
Sbjct: 61  FGPEQDRDKAIALAASIEMLHTATLIHDDI--VDEADLRRSQPNIRSQFGNVVSVYAGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L    F+++S   T LK    S  + S +    L G L GQM D  +  +   +      
Sbjct: 119 LFVCCFKLLSDYSTSLK----SLQLNSRSMEKVLNGEL-GQMDDRYNYELSVKEYLENIS 173

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            KT  L   +C  GA  +  S+   ++    G ++G+ FQ+ DD+LD     +++ K
Sbjct: 174 GKTAELFQLSCSVGAFESGTSERFAKKAGDIGLSIGMAFQIIDDILDYTKESQEIGK 230


>gi|116292709|gb|ABJ97673.1| polyprenyl synthase [uncultured bacterium]
          Length = 328

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 105/234 (44%), Gaps = 17/234 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + + +++  K+ D+   + +      +   +N  +          GK++R  L    A L
Sbjct: 11  IKAPIEKEMKQFDSYFKESMKSKVRLLDIINNYIIK-------RKGKEVRPILTFLSARL 63

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                 +     A  + +H  +LIHDD+  +D  Y RRG  +++  +    A++ G+ LL
Sbjct: 64  LGDIQESTYVAAALTQLLHTATLIHDDV--VDEAYERRGFFSINALWKSKAAVLVGDYLL 121

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           +    +    K   +  + S  +  ++    L      Q+   +   I E   F I   K
Sbjct: 122 SKGLLVALENKEYDQLQVVSDAVREMSEGELL------QLEKSRKLDITEDVYFDIIYKK 175

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
           T +L+    + GA+   A+++++E+L+ FGE LG+ FQ+ DDL D E   ++ K
Sbjct: 176 TASLIASCTQLGALSVGATKDQQEKLKRFGECLGVAFQMKDDLFDYEKQGNIGK 229


>gi|281422323|ref|ZP_06253322.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205]
 gi|281403644|gb|EFB34324.1| octaprenyl-diphosphate synthase [Prevotella copri DSM 18205]
          Length = 325

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 12/218 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73
           I+  L D +      +   H+D LLS +   +    GK++R  L+   A  F        
Sbjct: 11  IEAELADFIDLFNKSL--MHSDGLLSQVLDHIRQRAGKRMRPILILLMARNFGKVSNVTQ 68

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
                +E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++ G+ +L+ A   +S 
Sbjct: 69  HSAVGLELLHTASLVHDDV--VDESVERRGQASVNATYNNKVAVLVGDFILSTALLHVSY 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             ++      ++L   L++   L      Q+  I +E I E   + + K KT AL     
Sbjct: 127 SHSEEIVRYLAELGRILSNGEIL------QLNSISNEEISEDIYYQVIKQKTAALFEACA 180

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             GA+ A+AS+ + E  + FG+NLGIIFQ+ DD+ D  
Sbjct: 181 GIGAMSANASELQIEEAKRFGQNLGIIFQIRDDIFDYY 218


>gi|189218934|ref|YP_001939575.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
           V4]
 gi|189185792|gb|ACD82977.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
           V4]
          Length = 394

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 24/233 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
            L S+L++    ID    ++L Q       + +  ++   RY L   GK+IR  LV   A
Sbjct: 69  SLTSQLKDYLAWIDR---EILNQAE-----EFDAGIVPLFRYVLASEGKRIRPLLVLLSA 120

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     L +   +E IH  +L+HDD+  +D   +RRG P+V  ++    +++ G+ 
Sbjct: 121 KGSGGIGENHLYLAVVVEMIHLATLVHDDI--LDGASMRRGIPSVTSRWGSEISVLLGDN 178

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179
           L   A ++       +  ++            G+  +  G++L  +   D  + E +   
Sbjct: 179 LFAQALKVCCRLHPDIIQSV----------ANGVCVVCSGEILQTRRRFDWNLLEEEYLK 228

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I +MKTG L    CE  A +  AS+   E L  FG+ LG  +Q+ DD LD   
Sbjct: 229 IIQMKTGELFRIPCELAARLNSASRTVSEALGRFGQALGSSYQIYDDCLDLFG 281


>gi|220932319|ref|YP_002509227.1| heptaprenyl diphosphate synthase component II [Halothermothrix
           orenii H 168]
 gi|219993629|gb|ACL70232.1| heptaprenyl diphosphate synthase component II [Halothermothrix
           orenii H 168]
          Length = 326

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 10/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + E  +R   +++  + +    +       +  A R  +  GGK++R  LV   A L + 
Sbjct: 7   IAEYRQRFAPVIEK-IDEIIWEITKTRVGLINIATRDLVESGGKRLRPLLVVLSARLGDF 65

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      + +AIE +H  +L+HDD+  +D   IRRG+ +   ++ +  A+  G+ +L+ A
Sbjct: 66  DKEKIYHIASAIELLHMATLVHDDI--IDEARIRRGEISAQSKFGKDVAVFLGDFMLSRA 123

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+I +   ++      ++++  +            Q  D  +  +   +     + KT  
Sbjct: 124 FDIFTLYLSRHSLRKLNKVVGLICEGEI------DQYEDKFEYKVSIREYLRRIRRKTAL 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L   +   GA  +         +  FG  LG  FQ+ DD+LD   D
Sbjct: 178 LFGLSTYIGAYESGVRGRNLSNIYRFGLRLGTAFQIQDDILDFVAD 223


>gi|289550707|ref|YP_003471611.1| Geranyltranstransferase (farnesyldiphosphate synthase)
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180239|gb|ADC87484.1| Geranyltranstransferase (farnesyldiphosphate synthase)
           [Staphylococcus lugdunensis HKU09-01]
          Length = 260

 Score =  168 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 4/197 (2%)

Query: 43  IRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           ++Y++  GGK++R  L+     + N ++   L   AA+E IH YSLIHDDLP+MD+   R
Sbjct: 1   MQYSINAGGKRVRPLLLLLTLDMLNKDYQLGLATAAALEMIHTYSLIHDDLPAMDDDDYR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGK T H  + E  A++AG+ LLT AF++IS+  TQL ++I+ +L+  L    G  GM+G
Sbjct: 61  RGKLTNHKVFGEWKAVLAGDALLTKAFDVISN-DTQLDNDIKVKLIQRLAFASGHLGMVG 119

Query: 162 GQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           GQ LD+Q E   +D + +  I + KTGAL+ FA  +   +A  +++  E L  F ++LG+
Sbjct: 120 GQALDMQSETQAVDISTLEQIHRAKTGALLTFAVMAATDIAQVNEHVAEHLNLFSQHLGL 179

Query: 220 IFQLADDLLDCEEDLPK 236
           +FQ+ DDLLD   +  K
Sbjct: 180 MFQIKDDLLDVYGEESK 196


>gi|11465411|ref|NP_045198.1| prenyl transferase [Cyanidium caldarium]
 gi|14195057|sp|Q9TLS1|PREA_CYACA RecName: Full=Prenyl transferase
 gi|6466314|gb|AAF12896.1|AF022186_18 unknown [Cyanidium caldarium]
          Length = 323

 Score =  168 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 14/230 (6%)

Query: 9   LQENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF 65
           ++ NSK + ++ +DLL   QT + +   +N  L +A ++ L+   KKIR  +V   A   
Sbjct: 1   MKVNSKTLQSVKEDLLNIEQTLNKLIKVNNPILSAAAKHLLIVESKKIRPAIVLLVAKAI 60

Query: 66  NVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           + N     +  R+    E IH  +L+HDD+  +D   IRRG  +V+  +    A+ AG+ 
Sbjct: 61  DKNKKIKTSQQRLAEVTEIIHTATLLHDDV--VDESIIRRGTKSVNKTFGNKIAVFAGDF 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +   +++          S+++  L            Q L   + +    +      
Sbjct: 119 LFAQSSWYLANINNLEVVKAISKVITDLAEGE------LQQNLTQFNTYYSIIKYLEKSF 172

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  +C+S  +++   Q+   +   +G+NLG+ FQ+ DD+LD   
Sbjct: 173 NKTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITS 222


>gi|255011168|ref|ZP_05283294.1| putative isoprenoid biosynthesis related protein [Bacteroides
           fragilis 3_1_12]
          Length = 276

 Score =  168 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 11/179 (6%)

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +L+  +  +      AIE  H Y+L+HDDL  MD   +RRGK TVH  +++ TAI++
Sbjct: 1   MAYNLYKEDVTSVYDPATAIEVYHNYTLLHDDL--MDRADMRRGKTTVHKVWNDNTAILS 58

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176
           G+ ++  A++ ++S  ++    +     L+         +  GQ +D+  E  D   E +
Sbjct: 59  GDAMMVLAYQYMASCSSEYLKEVMDLFSLT------ALEICEGQQMDMGFESRDDVKEEE 112

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              + ++KT  L+  + + GAI+  AS+ + E L  FG  +G+ FQL DDLLD   D  
Sbjct: 113 YLEMIRLKTAVLLAASLKIGAILGGASREDAENLYDFGMQIGVAFQLQDDLLDVYGDSA 171


>gi|224536943|ref|ZP_03677482.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521430|gb|EEF90535.1| hypothetical protein BACCELL_01819 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 324

 Score =  168 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 25/230 (10%)

Query: 5   LPSKLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + ++L +  K  D  L     LL +  SH++ ++              GK +R  L+   
Sbjct: 11  IAAELDDFKKLFDNSLTSSNFLLNEVISHIRQKN--------------GKMMRPILLLLV 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L+      +L    ++E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++ G+
Sbjct: 57  AKLYGRICPESLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIYNNKVAVLVGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL  A   +         ++ S+L  +L+    L      Q+ ++ +    E   F + 
Sbjct: 115 YLLATALVQVGKTHNYAIIDVVSRLGQNLSEGELL------QLSNVSNLQFSEEIYFDVI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + KT  L     +SGA+    +  + E  R FGE +G+ FQ+ DD+ D  
Sbjct: 169 RKKTAVLFAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIKDDIFDYY 218


>gi|83721521|ref|YP_441686.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
 gi|167618604|ref|ZP_02387235.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis Bt4]
 gi|257137855|ref|ZP_05586117.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
 gi|83655346|gb|ABC39409.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis E264]
          Length = 330

 Score =  168 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 12  AHLLTPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 64

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 65  GALGEHTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 122

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE +   + +
Sbjct: 123 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDEARYMQVIR 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 177 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 226


>gi|107021658|ref|YP_619985.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054]
 gi|116688604|ref|YP_834227.1| trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424]
 gi|170731903|ref|YP_001763850.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
 gi|105891847|gb|ABF75012.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia AU 1054]
 gi|116646693|gb|ABK07334.1| Trans-hexaprenyltranstransferase [Burkholderia cenocepacia HI2424]
 gi|169815145|gb|ACA89728.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
          Length = 331

 Score =  168 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 13  AHLLAPITSDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 66  GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + +
Sbjct: 124 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|72381895|ref|YP_291250.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. NATL2A]
 gi|72001745|gb|AAZ57547.1| trans-hexaprenyltranstransferase [Prochlorococcus marinus str.
           NATL2A]
          Length = 323

 Score =  168 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 12/200 (6%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHDDL 92
             L +A  +    GGK++R  +V   +          L+   +    E IH  SL+HDD+
Sbjct: 31  PILQAAAEHLFSAGGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHTASLVHDDV 90

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG  TVH ++D   A++AG+ L   A   +++ +      + S++++ L  
Sbjct: 91  --VDEADTRRGVETVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRVIMDLAE 148

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
               QG+      +  D              KT +L+  + ++  ++++  Q     L  
Sbjct: 149 GEIKQGL------NRFDSSQSFESYLEKSYCKTASLIANSSKAIGVLSNVDQESLNSLYF 202

Query: 213 FGENLGIIFQLADDLLDCEE 232
           FG  LG+ FQ+ DD+LD   
Sbjct: 203 FGRQLGLAFQVVDDILDFTG 222


>gi|260579301|ref|ZP_05847183.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Corynebacterium jeikeium ATCC 43734]
 gi|258602430|gb|EEW15725.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Corynebacterium jeikeium ATCC 43734]
          Length = 336

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 23/236 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   L ++ ++++ +L D L    S + T     L  A      GGK+ R       
Sbjct: 16  DAQLNEALGQSMQQVEQLLKDRLSVGESFL-TDKISHLFEA------GGKRFRVMFALLA 68

Query: 62  ASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A          +    A +E  H  +L HDD+  MD    RRG  + + +++   AI+AG
Sbjct: 69  AHYGEKPTAQEVHEAAAVVELTHLATLYHDDV--MDESDQRRGAESANKRWNNSVAILAG 126

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQV 177
           + L   A EI+++   Q                   Q ++ GQM +    +D   +    
Sbjct: 127 DYLFAIASEIMATLGAQ----------TVQHFAETFQELVTGQMRETIGARDGEDEIEHY 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + + KTG L+  A   GA+ + AS+  +E L  FG N+G IFQ+ DD++D   D
Sbjct: 177 LTVIQEKTGVLIASAGWLGALHSGASEEHREALFRFGRNVGQIFQIVDDIIDIWAD 232


>gi|313622186|gb|EFR92727.1| polyprenyl synthetase [Listeria innocua FSL J1-023]
          Length = 326

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I++ +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIESNI----QIRDKHVEKNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLSRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
             KT  L   +C SGA  + A +    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 173 SGKTAQLFALSCYSGATGSKAPRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|297563981|ref|YP_003682954.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848430|gb|ADH70448.1| Trans-hexaprenyltranstransferase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 334

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 27/243 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           ++  L  ++Q+N ++++ +L + +           +  L  A  + L  GGK+ R+ LV 
Sbjct: 15  VDDALAREVQDNLEKVEDLLRESVAS--------SDPLLTEAASHLLAAGGKRFRATLVL 66

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A   + +    +   A +E  H  +L HDD+  MD   +RRG+P+ + ++    AI+ 
Sbjct: 67  LAAHFGDPSVPDLIPAAAVVELTHVATLYHDDV--MDEAELRRGEPSANQRWGNSVAILT 124

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQ 176
           G+ +   A E+++   T+                     ++ GQ+L+             
Sbjct: 125 GDYVFARASEMLADLGTEAV----------RLQATTFGRLVQGQILETSGPQEGTDPLDH 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
              +   KT +L+  + E G +           +    + LG+ FQLADDLLD      D
Sbjct: 175 YLRVISDKTASLIASSAEFGGMFGKVDPETIGTVTRACDALGMAFQLADDLLDVASESTD 234

Query: 234 LPK 236
             K
Sbjct: 235 SGK 237


>gi|86607946|ref|YP_476708.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556488|gb|ABD01445.1| solanesyl diphosphate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 320

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 11/220 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TA 72
           ++  L+ L       +  +H    ++A      GGK IR  +V   A     +       
Sbjct: 8   VEADLERLRQNLTRLVSAKHPILAMAAEHLFSAGGKGIRPAIVLLIARATTPDGEITPRH 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D   +RRG  TV+  +D   A++AG+ L   A   ++
Sbjct: 68  WRLAEITEMIHTASLVHDDV--IDAADVRRGIDTVNTLFDNRIAVLAGDYLFGQAAWYLA 125

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +        + S++++ L            Q L   D  +           KT +LM  +
Sbjct: 126 NLDNLEVVKLLSKVIMDLPEGEV------RQSLTRFDPDVSMEDYLAKSFYKTASLMSGS 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++  +++  S+   +RL  FG +LGI FQ+ DDLLD   
Sbjct: 180 SKAAGLLSGVSEEVADRLFDFGRDLGIAFQIVDDLLDFTA 219


>gi|220909327|ref|YP_002484638.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
 gi|219865938|gb|ACL46277.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
          Length = 989

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 17/227 (7%)

Query: 19  ILDD---LLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLVTECASLFNVN-HLTA 72
           +L+D   +L Q     QT  +  L+   +R  L L GK+IR+  V   A +   +    A
Sbjct: 671 LLEDGMSVLDQNFQLDQTVADPALVQQVVRQILSLPGKRIRALCVYLSACVGRRSYPQAA 730

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +  A+E +H  SL+HDD+  +D    RR +P+ ++ Y    +I+ GN L+  A +++ 
Sbjct: 731 ENIALAVELVHAASLLHDDV--IDLAPQRRHQPSSNMVYGNAASILGGNFLVVQAAQLLL 788

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +           + + ++  +   Q    GQ++      ++  Q   I + KT  L  + 
Sbjct: 789 NTGRPGLAADLLRAVEAMILSESEQLENRGQVI------LNPEQYLNIIRGKTATLFRWG 842

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           C++GA +++      E L  +GENLG+ FQL DDLLD   +   L K
Sbjct: 843 CQAGASISNHPAAVVEALARYGENLGMAFQLIDDLLDVIGEGTLLGK 889


>gi|294496102|ref|YP_003542595.1| polyprenyl synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667101|gb|ADE36950.1| Polyprenyl synthetase [Methanohalophilus mahii DSM 5219]
          Length = 292

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 15/186 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKK R  ++   + +       AL    AIE IH  SLIHDDL  +D G +RRG  T H
Sbjct: 40  GGKKTRPVILLLSSRICGSEIENALDAALAIELIHSASLIHDDL--LDRGVLRRGVKTAH 97

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
             Y    A++AG+ L++ + E+ISS   ++                    M  G+ +D+ 
Sbjct: 98  EVYGTAAAMLAGDYLISKSIELISSYGKEIGTE----------FGRAGMEMAEGEAMDVD 147

Query: 168 --QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +    +  + F   + KT +L   +   GA +A A ++   + R FG  LG  +Q+ D
Sbjct: 148 LLEKNINNRVEYFNCIEKKTASLFAASAVMGAYVAGADEDTVSKFRLFGNKLGTAYQIVD 207

Query: 226 DLLDCE 231
           D+L+  
Sbjct: 208 DMLEYT 213


>gi|288925940|ref|ZP_06419870.1| octaprenyl-diphosphate synthase [Prevotella buccae D17]
 gi|288337364|gb|EFC75720.1| octaprenyl-diphosphate synthase [Prevotella buccae D17]
          Length = 325

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 8/182 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L+   A  F        R    +E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKRMRPMLILLMAKNFGEVTEVTQRATVGLELLHTASLVHDDV--VDESGERRGQASVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y+   A++ G+ +L+ A   +S    Q      +QL  +L++   L      Q+ +I++
Sbjct: 103 SYNNKVAVLVGDYILSTALLNVSLTGDQAIITYLAQLGRTLSNGEIL------QLTNIRN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + I E   + + + KT AL       GA+   A + + E  R FG+NLGIIFQ+ DD+ D
Sbjct: 157 QEISEEVYYQVIRQKTAALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIRDDIFD 216

Query: 230 CE 231
             
Sbjct: 217 YY 218


>gi|260599331|ref|YP_003211902.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis
           z3032]
 gi|260218508|emb|CBA33693.1| Geranylgeranyl pyrophosphate synthetase [Cronobacter turicensis
           z3032]
          Length = 338

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 80/240 (33%), Positives = 122/240 (50%), Gaps = 12/240 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           + G   +LQ     + T LD+LL         Q  D + +A+R  AL  GK++R  L+  
Sbjct: 45  SSGQEIELQALHDALQTRLDELLP------PGQERDLVCAAMREGALTPGKRVRPLLLIL 98

Query: 61  CASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            A     +      + +  A+E +H  SL+ DD+P MDN  +RRGKPT+H QY E  AI+
Sbjct: 99  TACDLGCDASQPALMDLACAVEMVHAASLMLDDIPCMDNALLRRGKPTIHRQYGESVAIL 158

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQ 176
           A   LL+ AF +I+   + L D+ ++Q +  L+  +GLQG++ GQ  D    ++      
Sbjct: 159 AAVALLSRAFGVIAQA-SPLSDSCKTQAVSELSSAVGLQGLVQGQFRDLSEGNQARSAEA 217

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +     +KT  L     +  AI A AS + + +LR F  +LG  FQL DDL D   +  K
Sbjct: 218 ILATNDLKTSVLFDATLQIAAIAAGASASVRHKLREFSRHLGQAFQLLDDLADGLSNTGK 277


>gi|254468498|ref|ZP_05081904.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13]
 gi|207087308|gb|EDZ64591.1| octaprenyl-diphosphate synthase [beta proteobacterium KB13]
          Length = 327

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 15/235 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           N  L S   ++ ++++ ++   L      +  Q    ++        GGKK+R   +   
Sbjct: 8   NITLNSDQHDHLQKVNDVIRSSLDSEVP-LINQVGKHIID------GGGKKMRPQCLINL 60

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L         ++ A +E IH  +L+HDD+  +D+   RR  PT +IQ+    +I+ G+
Sbjct: 61  AGLAGGVKDIHYQLAAIVEFIHTATLLHDDV--VDDSDTRRSSPTANIQFGNSASILVGD 118

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            + + +F+++        DNI    +L+ T N   +G +  Q+++  +  I +   F + 
Sbjct: 119 FIYSRSFQMMVEL-----DNIEIMDILAYTTNKIAEGEVL-QLINKNNFDISQDNYFKVI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           K KTG L     +   I    + N+K  L   G+  G I+QL DD+LD   D+ K
Sbjct: 173 KAKTGVLFEACGKLACIANKCTLNQKTSLSLIGKIFGEIYQLIDDVLDYSGDVAK 227


>gi|325292016|ref|YP_004277880.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3]
 gi|325059869|gb|ADY63560.1| octaprenyl-diphosphate synthase [Agrobacterium sp. H13-3]
          Length = 338

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    AS+F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASASMFGYEGDHHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   +
Sbjct: 115 TIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSTAASVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD+L
Sbjct: 169 NMETTEDDYLQVIRAKTAALFAAAAEVGPIVAKTDKASRSALKSYGMNLGLAFQLVDDVL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGKSADLGK 239


>gi|312867098|ref|ZP_07727308.1| geranyltranstransferase [Streptococcus parasanguinis F0405]
 gi|311097227|gb|EFQ55461.1| geranyltranstransferase [Streptococcus parasanguinis F0405]
          Length = 291

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           + +E   R++  +     + A          L+ ++ Y++  GGK++R  L+ E    F 
Sbjct: 2   RQEEKRNRVEQAVRSFYEEKA------VAPHLVESVLYSIQAGGKRLRPLLLLELLEAFG 55

Query: 67  VNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +       +V  A+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  LELTEAHFQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
             F +I++  + L D ++  L+L L+   G +GM+ GQ+LD++ E   +   ++  I   
Sbjct: 116 DPFGMIAA--SALPDVVKVSLILELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHAN 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KTG L+ +   +  ++     +  + L+  G+ LG+ FQ+ DD+LD   D  
Sbjct: 174 KTGRLLAYPFIAAGLILELQADIAQLLKKIGKKLGLAFQVRDDILDLVADFE 225


>gi|315606906|ref|ZP_07881913.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574]
 gi|315251414|gb|EFU31396.1| octaprenyl-diphosphate synthase [Prevotella buccae ATCC 33574]
          Length = 325

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 8/182 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  L+   A  F        R    +E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKRMRPMLILLMAKNFGEVTEVTQRATVGLELLHTASLVHDDV--VDESGERRGQASVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y+   A++ G+ +L+ A   +S    Q      +QL  +L++   L      Q+ +I++
Sbjct: 103 SYNNKVAVLVGDYILSTALLNVSLTGDQAIITYLAQLGRTLSNGEIL------QLTNIRN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + I E   + + + KT AL       GA+   A + + E  R FG+NLGIIFQ+ DD+ D
Sbjct: 157 QEISEEVYYQVIRQKTAALFEACAGMGAMSTGAGREDIEAARKFGQNLGIIFQIRDDIFD 216

Query: 230 CE 231
             
Sbjct: 217 YY 218


>gi|297192769|ref|ZP_06910167.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721043|gb|EDY64951.1| isoprenyl diphosphate synthase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 336

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            GL  + Q     + T L  +        +++      +A      GGK+ R  LV   A
Sbjct: 7   FGLSVRDQALEADVRTGLSAVEAGLLDATKSEVPFITEAAQHLVRAGGKRFRPLLVMLAA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G+ 
Sbjct: 67  QFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVDSANTRWGNSVAVLTGDF 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFM 179
           L   A  I++    +                   + ++ GQ+L+    +D          
Sbjct: 125 LFARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVDHYLD 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   KTG+L+  +   GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 175 VMAGKTGSLVAVSVRFGAMMSGADERVVDTLTQYGERLGVAFQLADDVLDIASD 228


>gi|171316229|ref|ZP_02905452.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
 gi|171098643|gb|EDT43440.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
          Length = 331

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 13  AHLLAPITSDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 66  GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + +
Sbjct: 124 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|262190890|ref|ZP_06049107.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae CT 5369-93]
 gi|262033217|gb|EEY51738.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae CT 5369-93]
          Length = 274

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 8/178 (4%)

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L    A              A IE IH  +L+HDD+  +D   +RRGK T +  +    
Sbjct: 1   MLAVLSAKALGYQGAHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAA 58

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           +++ G+ + T +F++++   +     ++   ++S   N+  +G +  Q+++  D    E 
Sbjct: 59  SVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGEV-QQLMNCNDPDTTEA 112

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               +   KT  L   A + GAI+  AS   +  ++ +G+ LG  FQL DD++D   D
Sbjct: 113 SYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSD 170


>gi|329938314|ref|ZP_08287765.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
           M045]
 gi|329302803|gb|EGG46693.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
           M045]
          Length = 336

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A ++ +  GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD 
Sbjct: 42  ITEAAQHLVRAGGKRFRPLLVMLAAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDE 99

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  + + ++    A++ G+ L + A  +++    +                   +
Sbjct: 100 AEVRRGVDSANTRWGNSVAVLTGDFLFSRASHMLADLGPEAV----------RIQAEAFE 149

Query: 158 GMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            ++ GQ+L+    +D          +   KTG+L+  AC  GA+M+ A +   + L  +G
Sbjct: 150 RLVTGQILETAGPRDGRDPVEHYLDVLAGKTGSLVAVACRFGAMMSGADETVVDVLTQYG 209

Query: 215 ENLGIIFQLADDLLDCEED 233
           E LG+ FQLADD+LD   D
Sbjct: 210 ERLGVAFQLADDVLDIASD 228


>gi|303231368|ref|ZP_07318102.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513964|gb|EFL55972.1| polyprenyl synthetase [Veillonella atypica ACS-049-V-Sch6]
          Length = 323

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 12/222 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E  +RI   L+ +    AS   T   D   L+  +  +  GGK++R+ L    A+     
Sbjct: 8   EMMERIALDLEGVERALASSFNTGSEDFNTLIRPL--SEAGGKRLRAQLCLLIANAGTSV 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +++  A+E +H  +LIHDD+  +D   IRRG+ T+H       AI++G+ L   AF
Sbjct: 66  EAERIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIHKHKGNKVAILSGDYLFAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            I+S         I S ++  L     +Q     ++    D ++ +TQ       KT   
Sbjct: 124 RIVSEMPHMEYLKIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQ------KKTADF 177

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           M    E G ++   S +E   L+ +G  LG+ FQ+ DD++D 
Sbjct: 178 MEGCMELGGLLGGWSSDEIMYLKRYGHALGMAFQITDDIMDY 219


>gi|322436201|ref|YP_004218413.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163928|gb|ADW69633.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 329

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 16/221 (7%)

Query: 17  DTILDDLLL-QTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTAL 73
           D + DDLL  +    +Q+    ++++ I   L+  GGK+IR  L+   A        + +
Sbjct: 14  DLLRDDLLAIEREFTVQSASPVQVITDIAEYLIAGGGKRIRPLLLLLSAKALGATSQSRI 73

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+GA +E +H  +L+HDD+  +D    RRG+P+ +  +     ++AG+ L   +F     
Sbjct: 74  RLGAVVEMLHTATLVHDDI--IDEADTRRGRPSSNTAWGNSKCVLAGDWLYMQSFRTALE 131

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCF 191
            +     ++              Q M+ G++L ++     I+E + F +   KT  L   
Sbjct: 132 ERNFHVLDLLI---------TLTQQMVEGELLQMEKLGHLINEEEYFDLIFRKTAFLFKV 182

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + + GA +  AS   +E+L  +G NLG+ FQ+ DD+LD   
Sbjct: 183 SMQLGAAIEGASDQTEEKLGEYGRNLGLAFQIVDDVLDLTA 223


>gi|299137617|ref|ZP_07030798.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298600258|gb|EFI56415.1| Polyprenyl synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 334

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 21/227 (9%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTA 72
            D + DDL  +    +H      + +    +Y + GG K+IR  ++   A          
Sbjct: 13  FDLLRDDLAAIESEFAHQSDSPVEVVTDIAQYLIAGGGKRIRPMMLLLSARAVGCESEAR 72

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R+GA +E +H  +L+HDD+  +D    RRG+P+ +  +     ++AG+ L   +F+   
Sbjct: 73  IRLGAVVEMLHTATLVHDDI--IDEASTRRGRPSSNTTWGNAKCVLAGDWLYMQSFQTAL 130

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMC 190
           + +     N R   +L        Q M+ G++L ++     I+E + F +   KT  L  
Sbjct: 131 AER-----NFRILDLLI----SLTQQMVEGELLQMEKLGHLINEEEYFDLIYRKTACLFK 181

Query: 191 FACESGAIMAHAS-----QNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + + GA++A           +E L  +G NLG+ FQ+ DD+LD   
Sbjct: 182 VSMQLGAVIAVPPTTPNAAPFEEALGEYGRNLGLAFQIVDDVLDLTA 228


>gi|315634742|ref|ZP_07890026.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393]
 gi|315476690|gb|EFU67438.1| octaprenyl-diphosphate synthase [Aggregatibacter segnis ATCC 33393]
          Length = 329

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 8/184 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         A+     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLITVLAARALGFEGQKAITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++    +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ 
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQLVAQLES-----LKILRIMADATNVLAEGEV-QQLMNVN 160

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D    E     +   KT  L   A ++ AI+A A   +++ L+ +G  LG  FQL DD+L
Sbjct: 161 DPQTSEENYMRVIYSKTARLFEVAAQAAAIIADADDEQEKALQNYGRYLGTAFQLVDDVL 220

Query: 229 DCEE 232
           D   
Sbjct: 221 DYSA 224


>gi|297617504|ref|YP_003702663.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145341|gb|ADI02098.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 345

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 17/224 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA 72
           +R+   L ++L        +    +L   +   L G GK +R  LV     L        
Sbjct: 8   ERVQKRLKEVL--------SGGQAQLEEVLMGPLQGLGKMLRPRLVLLSRGLLGPIEDLT 59

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           + V  A+ECIH  SLIHDD+  +D   +RRG PT++  Y    A++ G+     AF +++
Sbjct: 60  VDVAVAVECIHNASLIHDDI--IDAAVLRRGAPTINHLYGPKIAVLVGDHYFAAAFGLLT 117

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
               +      S  +  +            Q L++ + +I E   +     KT +L   A
Sbjct: 118 RHNLKHIMRELSDAIQDMCKGEIY------QDLNLFNPYITEDDYWTSIFGKTASLFSAA 171

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           C  G +    S  E   +  FG  LG  +Q+ADD+ D   D  K
Sbjct: 172 CRCGVMAGGGSAREVYLMGKFGRELGYAYQVADDINDLIGDEEK 215


>gi|254253318|ref|ZP_04946636.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158]
 gi|124895927|gb|EAY69807.1| Trans-hexaprenyltranstransferase [Burkholderia dolosa AUO158]
 gi|325528031|gb|EGD05253.1| polyprenyl synthetase [Burkholderia sp. TJI49]
          Length = 331

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 13  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 66  GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + +
Sbjct: 124 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|320530437|ref|ZP_08031495.1| polyprenyl synthetase [Selenomonas artemidis F0399]
 gi|320137270|gb|EFW29194.1| polyprenyl synthetase [Selenomonas artemidis F0399]
          Length = 321

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 11/221 (4%)

Query: 16  IDTILDDL-LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF-NVNHLT 71
            D I +DL +L+ A       +  L+S I   L+  GGK++R  L    A    + +   
Sbjct: 2   FDVIEEDLTVLEAALEAALSSDSALVSDIGAHLVSSGGKRLRPALFLLAARAGADFDRDR 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+ +  A+E IH  SL+HDD+  +D    RRG  T + ++    AI++G+ +   AF+ +
Sbjct: 62  AMPIAVALELIHTASLVHDDV--IDEADTRRGSATTNAKWGNQVAILSGDYIFARAFKQV 119

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +         +R   ++       +      Q   +    + E   +   + KT   +  
Sbjct: 120 ARVGYSSHIYMRLADLVCTLSEGEIL-----QDHTVYQVPVSEDAYYERIRKKTADFLEI 174

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            CE GA +   S  +      +G  +G+ FQ+ DDLLD ++
Sbjct: 175 CCELGAGIGGMSAEDTANFARYGHAIGMAFQITDDLLDLQQ 215


>gi|288965865|pdb|3LMD|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Corynebacterium Glutamicum Atcc 13032
 gi|317455534|pdb|3Q2Q|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Corynebacterium Glutamicum Complexed With Calcium
           And Isoprenyl Diphosphate
          Length = 360

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 15/226 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-H 69
           E + RI+  +  +     + + +  +  +   +     GGK+ R       +        
Sbjct: 35  ELTARINDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLS 94

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              ++    +E  H  +L HDD+  MD   +RRG P+ + ++D   AI+AG+ LL +A  
Sbjct: 95  ENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPSANARWDNSVAILAGDILLAHASG 152

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGA 187
           ++S   T    +                 ++ GQM +       +       + + KTG 
Sbjct: 153 LMSQLGTDTVAH----------FAETFGELVTGQMRETVGPRDTDPIEHYTNVIREKTGV 202

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  A   GA+ A A+    + L+ FG  +G+IFQ+ DD++D   +
Sbjct: 203 LIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSE 248


>gi|302536189|ref|ZP_07288531.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C]
 gi|302445084|gb|EFL16900.1| heptaprenyl diphosphate synthase component II [Streptomyces sp. C]
          Length = 336

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++  L   L  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALETDVQAGLAAVEAGL---LEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +   +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G
Sbjct: 65  ASRFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVESANTRWGNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A  I++    +                   + ++ GQ+L+    +D        
Sbjct: 123 DFLFARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVAHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +   GA+M+ A ++  + L  +GE LG  FQLADD+LD   D
Sbjct: 173 LDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLADDVLDIASD 228


>gi|254382424|ref|ZP_04997783.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
 gi|194341328|gb|EDX22294.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
          Length = 336

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++  L   L  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALETDVQAGLAAVEAGL---LEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +   +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G
Sbjct: 65  ASRFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEADVRRGVASANARWGNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A  I++    +                   + ++ GQ+L+    +D        
Sbjct: 123 DFLFARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVEHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +   GA+M+ A ++  + L  +GE LG  FQLADD+LD   D
Sbjct: 173 LDVIAGKTGSLIAVSGRFGALMSGADESVVDILTQYGERLGTAFQLADDVLDIASD 228


>gi|73748232|ref|YP_307471.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
           CBDB1]
 gi|73659948|emb|CAI82555.1| heptaprenyl diphosphate synthase component II [Dehalococcoides sp.
           CBDB1]
          Length = 326

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 16/237 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             + + + E  K ++   D+   +  S  + +    +   + Y L+GGK +RS L    A
Sbjct: 7   SSIYAPINEGLKGVE---DEF--KLVSESRKKSFPEMAEMLDYILVGGKVLRSALSMLSA 61

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F       L +  + E +H  +L+HDD  ++D    RRG+ TV+  +    AI+ G+ 
Sbjct: 62  MCFGAGIKKVLPLATSSEMLHIATLVHDD--AIDKADTRRGRRTVNAVWGLEKAILLGDF 119

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L  +     ++       N+    + S T  I   G L  Q     +             
Sbjct: 120 LFAH-----AAETAAETGNMGIVTLFSQTLQIIASGELK-QAYASFNPDQSYENYLERIS 173

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            KT AL   A + GAI+A AS +++E +R +G NLG+ FQ+ DD+LD      D+ K
Sbjct: 174 GKTAALFVMATKGGAILADASSSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGK 230


>gi|320106552|ref|YP_004182142.1| polyprenyl synthetase [Terriglobus saanensis SP1PR4]
 gi|319925073|gb|ADV82148.1| Polyprenyl synthetase [Terriglobus saanensis SP1PR4]
          Length = 329

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 17/230 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGG-KKIRSFLVTECASLFN 66
            ++K +  +L D L         Q +     +     Y L GG K+IR  L+   A   +
Sbjct: 7   ADAKGVFDLLRDDLAAVEREFARQSSSEVRVITEIAEYLLAGGGKRIRPLLLLLSAKALH 66

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
               + +R+GA +E +H  +L+HDD+  +D    RRG+P+ +  +     ++AG+ L   
Sbjct: 67  FRGESRIRLGAVVEMLHTATLVHDDI--IDAADTRRGRPSSNTAWGNSKCVLAGDWLYMQ 124

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           +F++    +     ++              Q M+ G++L IQ     I+E + F +   K
Sbjct: 125 SFQVAMEERNFHVLDLLI---------SLTQQMVEGELLQIQKLGRLINEEEYFDLIFRK 175

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           T +L   + + GA +A A +  + +L  +G NLG+ FQ+ DD+LD   + 
Sbjct: 176 TASLFRVSMQLGAAIADAPKEIEGQLGEYGRNLGLAFQIVDDVLDLTSEE 225


>gi|110677528|ref|YP_680535.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans
           OCh 114]
 gi|109453644|gb|ABG29849.1| geranylgeranyl pyrophosphate synthetase [Roseobacter denitrificans
           OCh 114]
          Length = 294

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 76/228 (33%), Positives = 113/228 (49%), Gaps = 16/228 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           RI+  +   +       +     RL SA+ YA   GG +IR  ++T  A     +     
Sbjct: 6   RIEAAIAQAVA--VGQGRGAVPQRLSSALGYATAPGGARIRPTILTSVALACGDDQPKLT 63

Query: 74  RVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
              A A+E IHC SL+HDDLP  D+   RRGKP+VH  Y E  A++ G+ L+  AFEI++
Sbjct: 64  DAAASALELIHCASLVHDDLPCFDDADTRRGKPSVHKAYSEPLAVLTGDSLIVLAFEILA 123

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
             ++ L  +  +Q++L L+   G+  G+  GQ  + + E      +    + KTGAL   
Sbjct: 124 R-QSGLAPDRVAQMILILSQRTGMPGGICAGQGWESEAEI----DLSAYHQAKTGALFIA 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD--CEED-LPK 236
           A + GA+ A     E E     G  +G  FQ+ADDL D   + D L K
Sbjct: 179 ATQMGAVAAG---QEAEPWFELGARIGEAFQVADDLRDALYDADTLGK 223


>gi|218885233|ref|YP_002434554.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756187|gb|ACL07086.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 313

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 24/251 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             + ++L++ +  ++  L   L             RL +++ Y+L  GGK++R  L    
Sbjct: 5   SEIKTRLRDAAAGVERYLAACLADRGI------PARLRASMEYSLNAGGKRVRPVLCLTT 58

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+LF +     +   AAIE IH YSLIHDDLP+MD+  +RRGKP+ H  +DE TAI+AG+
Sbjct: 59  AALFGLPTERVMPFAAAIEMIHTYSLIHDDLPAMDDDDLRRGKPSNHKMFDEATAILAGD 118

Query: 122 GLLTYAFEIISSP--------------KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           GLLT AF+ ++                   +        + ++    G  GM+GGQ LD+
Sbjct: 119 GLLTDAFDFMAGVGAGVGAAAGDENGGNAAIPAANVLAALRAVARAAGAPGMVGGQALDM 178

Query: 168 Q---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +      +   ++  +  MKTGAL+  +C SGA++A A  +   R+  +G ++G  FQ+ 
Sbjct: 179 EYTGRTGVTLEEMAAMHAMKTGALLRASCLSGALLAGADADALARIADYGAHIGAAFQIV 238

Query: 225 DDLLDCEEDLP 235
           DD+LD   D  
Sbjct: 239 DDILDEVGDEA 249


>gi|145294625|ref|YP_001137446.1| hypothetical protein cgR_0576 [Corynebacterium glutamicum R]
 gi|140844545|dbj|BAF53544.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 350

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 15/226 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-H 69
           E + RI+  +  +     + + +  +  +   +     GGK+ R       +        
Sbjct: 33  ELTARINDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLS 92

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              ++    +E  H  +L HDD+  MD   +RRG P+ + ++D   AI+AG+ LL +A  
Sbjct: 93  ENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPSANARWDNSVAILAGDILLAHASG 150

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGA 187
           ++S   T    +                 ++ GQM +       +       + + KTG 
Sbjct: 151 LMSQLGTDTVAH----------FAETFGELVTGQMRETVGPRDTDPIEHYTNVIREKTGV 200

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  A   GA+ A A+    + L+ FG  +G+IFQ+ DD++D   +
Sbjct: 201 LIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSE 246


>gi|149173800|ref|ZP_01852429.1| polyprenyl synthase [Planctomyces maris DSM 8797]
 gi|148847330|gb|EDL61664.1| polyprenyl synthase [Planctomyces maris DSM 8797]
          Length = 330

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 109/227 (48%), Gaps = 14/227 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYAL-LGGKKIRSF 56
           M   L +   +   R++ ++   L Q      ++ + +   +   +++     GK++R  
Sbjct: 1   MGDHLTT--HDLLARVEELIGGELEQAERVFLSEVSSKHPYVHDVLQHITRFQGKRLRPI 58

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L+   A+     + +   + + +E IH  +L+HDD+  +D+  IRR   TV+ +++  T+
Sbjct: 59  LLLLSAAATGGINESHYVLASVVEMIHLATLVHDDV--LDDALIRRHVATVNSRWNNETS 116

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L T+AF + +S       + R+  ++    N+  +G L  Q+ +  +  + E Q
Sbjct: 117 VLVGDFLFTHAFHLTASLG-----DARACRLIGRATNLVCEGELA-QIYERGNHELSEEQ 170

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
              I   KT  L   + + GA+ A A ++  E +  +G  LG+ FQ+
Sbjct: 171 YLEIINGKTAELCAISTQLGALYASADESIVEAMDEYGRALGVAFQI 217


>gi|289435907|ref|YP_003465779.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172151|emb|CBH28697.1| polyprenyl synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 326

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 19/238 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M    P+ L ++ K +   ++  +     H++    D + +       GGK +R      
Sbjct: 6   MWDDYPA-LSDDLKEVLQTIEKNIQIRDKHVEKNVKDLIHA-------GGKLLRPAFALL 57

Query: 61  CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A    + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  
Sbjct: 58  SAQAGPDFDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYT 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVF 178
           G+ L    F+I+S+  + +      + +   + NI    M    QM       +   +  
Sbjct: 116 GDYLFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYL 169

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
                KT  L   +C SGA  + AS+    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 170 TRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|282165107|ref|YP_003357492.1| polyprenyl synthetase [Methanocella paludicola SANAE]
 gi|282157421|dbj|BAI62509.1| polyprenyl synthetase [Methanocella paludicola SANAE]
          Length = 313

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 13/233 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   L   ++   ++  +I+D  L   A  ++      L   +RYAL L GK+IR+ ++T
Sbjct: 1   MESSLKD-IEALMEKRASIIDSRLNALAYAIE---PMLLSEVVRYALSLKGKRIRTTVLT 56

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                   +   A+    A+E +H  SL+ DD+  +D   IRRGK T++ ++    A+IA
Sbjct: 57  LSCEAAGGDMERAMAPAMAVEMLHNTSLVLDDI--IDKSDIRRGKATINNRWGNEMALIA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
            + +L+ A   I+     L   +             +  +  G+ L+++ +       + 
Sbjct: 115 CDVMLSLAIREITRSDLGLTKQM------IDCVADSMLRLAEGEALELEKKKFTIDDYYK 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KT +L   + ESGA++ +A Q   + L+ +G +LG+ FQ  DD+LD   
Sbjct: 169 IADKKTASLFSASAESGALVGNADQKYVKALQQYGRSLGLAFQARDDILDFTG 221


>gi|290958235|ref|YP_003489417.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22]
 gi|260647761|emb|CBG70866.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei
           87.22]
          Length = 336

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++  L +        +Q         A ++ L  GGK+ R  LV  
Sbjct: 13  DQALEADVQAGMAAVEEGLLEATKSEVPFIQ--------EAAQHLLRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++D   A++ G
Sbjct: 65  AAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVPSANARWDNSLAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A  +++       D +R Q           + ++ GQ+L+    +D        
Sbjct: 123 DFLFARASHVLADLG---PDAVRIQ-------AEAFERLVTGQILETAGPRDGRDPIDHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  A   GA+MA A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LDVLGGKTGSLVAVAGRLGALMAGADETVVDVLTQYGERLGVAFQLADDVLDVASD 228


>gi|305664558|ref|YP_003860845.1| polyprenyl synthetase [Maribacter sp. HTCC2170]
 gi|88708575|gb|EAR00811.1| polyprenyl synthetase [Maribacter sp. HTCC2170]
          Length = 325

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 13/218 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +T           LL+ I Y +    GK++R   V   A L      +    R  + I
Sbjct: 17  LFETKFRESMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKLLNNGEVNERTYRGASII 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D    RRG  +++  +    A++ G+ L +    ++ S      
Sbjct: 77  ELIHTASLVHDDV--VDESNKRRGFFSINALWKNKIAVLVGDYLFSKG--LLLSLDNGDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D +R   ++S+      +G L  Q+   +   IDE   + I + KT  L+   C  GA  
Sbjct: 133 DLLR---IISVAVREMSEGELL-QIEKARRLDIDEEIYYDIIRQKTATLIAACCSMGACS 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
                 E E  R FGE  G+ FQ+ DDL D  E+ + K
Sbjct: 189 VKPESEEVETFRKFGEFCGMAFQIKDDLFDYGEQKIGK 226


>gi|168019710|ref|XP_001762387.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686465|gb|EDQ72854.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 356

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 15/218 (6%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN--HLTALR 74
            LL      +    N  L++A +     GGK++R  LV         L N+        R
Sbjct: 46  QLLNDNLQKIVGADNPMLMAAAKQIFGAGGKRMRPALVFLVSRATCQLSNIQELRPQHRR 105

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +    E IH  SLIHDD+  +D    RRGK TVH  +    A++AG+ +   +   +++ 
Sbjct: 106 LAEITEMIHTASLIHDDV--LDESDTRRGKETVHQTFGTRVAVLAGDFMFAQSSWYLANL 163

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  + SQ++               Q  ++ D  +           KT +L+  + +
Sbjct: 164 DNLEVIKLISQVIRDFASGEI------KQAQNLFDTEVTLQNYLDKSYYKTASLIASSTK 217

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           S AI + ++ +   ++  +G +LG+ FQ+ DD+LD  +
Sbjct: 218 SAAIFSDSTSSVSNQMFDYGMHLGLAFQVVDDILDFTQ 255


>gi|83589030|ref|YP_429039.1| polyprenyl synthetase [Moorella thermoacetica ATCC 39073]
 gi|83571944|gb|ABC18496.1| Polyprenyl synthetase [Moorella thermoacetica ATCC 39073]
          Length = 320

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 12/207 (5%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           +  +      + RL   + YAL GGK +R  LV  CA     + L A RV AAIE +H  
Sbjct: 8   RVLAEAVAATDPRLQELLDYALEGGKGLRPTLVFLCARFGIYDALEAGRVAAAIELVHLA 67

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D   +RR +P ++  Y  V A++ G+ L   AF +++  K  +       
Sbjct: 68  SLVHDDI--LDGAAVRRNRPALYRAYGTVPAVLTGDYLFATAFGLLAKGKKAVL------ 119

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
                T    ++ M  G++  ++         F     KT AL+  AC  GAI+    +N
Sbjct: 120 ----YTVTEAIRSMCSGEIGQLKGGLAGPEAYFTYIGQKTAALISAACRCGAILGRVKRN 175

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
           ++E L  FG +LG+ +Q+ DD LD   
Sbjct: 176 QQECLAQFGWHLGLAYQIVDDCLDLFG 202


>gi|332827843|gb|EGK00578.1| hypothetical protein HMPREF9455_03221 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 323

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 10/204 (4%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
           +N R+   I Y +   GK+IR  L+   A      + T       +E +H  SLIHDD+ 
Sbjct: 29  NNVRIQEIIDYIMKSDGKRIRPILLLLAAKACGEINNTTYNSAITVELLHTASLIHDDV- 87

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D   IRRG  +++  YD   A++AG+  L+ A       K+ L  NI     +S    
Sbjct: 88  -VDESKIRRGMASLNAIYDNKMAVLAGDYFLSTAL-----IKSVLTGNIEIISRVSDLGR 141

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
              +G L  Q+  +++  +DE + F + + KT +LM      GA+   AS  E ER    
Sbjct: 142 DLAEGELN-QLSLVKELILDEDEYFQVIRKKTASLMSVCMRIGAMSVDASSEEVERFTKL 200

Query: 214 GENLGIIFQLADDLLDCEED-LPK 236
           GE LG+ FQL DD+ D   D + K
Sbjct: 201 GEYLGVCFQLRDDIFDYFTDAIGK 224


>gi|218460669|ref|ZP_03500760.1| farnesyltranstransferase protein [Rhizobium etli Kim 5]
          Length = 297

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 12/220 (5%)

Query: 17  DTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH-LTAL 73
           D +++  L     + +       L  A+  A+  GG ++R  L  + + +    H   A 
Sbjct: 14  DKLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKHPELAT 73

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  + E  A++AG+ L+  AF+ +S 
Sbjct: 74  RAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLAGDALIVMAFKYLS- 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
            +  L   +  +++  +   +G   G++ GQ +    E +    +      KTG+L   A
Sbjct: 133 LQAALTPELGGRMIEVVAEAVGPSHGLIAGQSM----EAMTHVAIDRYHHYKTGSLFVAA 188

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              GA+++ A           GE LG  +Q+ADD+ D   
Sbjct: 189 ATCGALVSGADP---APWSKVGELLGHAYQIADDIADTVG 225


>gi|28393675|gb|AAO42250.1| putative geranyl diphosphate synthase (GPPS)
           (dimethylallyltransferase) [Arabidopsis thaliana]
          Length = 322

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 17/226 (7%)

Query: 16  IDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT----ECASLFNVN 68
            + + DDL  L      +    N  L+SA       GGK++R  LV       A L  + 
Sbjct: 4   FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLK 63

Query: 69  HLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            LT    R+G  IE IH  SLIHDD+  +D   +RRG+ TVH  +    A++AG+ +   
Sbjct: 64  ELTVEHRRLGEIIEMIHTASLIHDDV--LDESDMRRGRETVHELFGTRVAVLAGDFMFAQ 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   +++ +      + SQ++               Q   + D  +      +    KT 
Sbjct: 122 ASWYLANLENLEVIKLISQVIKDFASGEI------KQASSLFDCDVKLDDYMLKSYYKTA 175

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  + +  AI +       E++  FG+NLG+ FQ+ DD+LD  +
Sbjct: 176 SLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQ 221


>gi|303229377|ref|ZP_07316167.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515913|gb|EFL57865.1| polyprenyl synthetase [Veillonella atypica ACS-134-V-Col7a]
          Length = 323

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 12/222 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E  +RI   L+ +    AS   T   D   L+  +  +  GGK++R+ L    A+     
Sbjct: 8   EMMERIALDLEGVERALASSFNTGSEDFNTLIRPL--SEAGGKRLRAQLCLLIANAGTSV 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +++  A+E +H  +LIHDD+  +D   IRRG+ T+H       AI++G+ L   AF
Sbjct: 66  EAERIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIHKHKGNKVAILSGDYLFAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            I+S         I S ++  L     +Q     ++    D ++ +TQ       KT   
Sbjct: 124 RIVSEMPHMEYLKIFSHIITCLVEGEFMQMEDVYRIDQGIDRYMTKTQ------KKTADF 177

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           M    E G ++   S +E   L+ +G  LG+ FQ+ DD++D 
Sbjct: 178 MEGCMELGGLLGGWSSDEIMYLKRYGHALGMAFQITDDIMDY 219


>gi|19551716|ref|NP_599718.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|62389371|ref|YP_224773.1| octaprenyl-diphosphate synthase protein [Corynebacterium glutamicum
           ATCC 13032]
 gi|21323238|dbj|BAB97866.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41324705|emb|CAF19187.1| PUTATIVE OCTAPRENYL-DIPHOSPHATE SYNTHASE PROTEIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 350

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 15/226 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-H 69
           E + RI+  +  +     + + +  +  +   +     GGK+ R       +        
Sbjct: 33  ELTARINDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLS 92

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              ++    +E  H  +L HDD+  MD   +RRG P+ + ++D   AI+AG+ LL +A  
Sbjct: 93  ENVIKAAVVVEITHLATLYHDDV--MDEASMRRGVPSANARWDNSVAILAGDILLAHASG 150

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGA 187
           ++S   T    +                 ++ GQM +       +       + + KTG 
Sbjct: 151 LMSQLGTDTVAH----------FAETFGELVTGQMRETVGPRDTDPIEHYTNVIREKTGV 200

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L+  A   GA+ A A+    + L+ FG  +G+IFQ+ DD++D   +
Sbjct: 201 LIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFSE 246


>gi|332978343|gb|EGK15068.1| octylprenyl diphosphate synthase [Psychrobacter sp. 1501(2011)]
          Length = 343

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 14/225 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL----LGGKKIRSFLVTECASLF-NVNHL 70
           I  I+ D        +    N ++   +  +      GGK++R  +   C+ L  +    
Sbjct: 24  IQQIIADDFAIMDKQVFGSLNSKVQLVMSVSQHVINAGGKRMRPLITLLCSRLCRDEQSE 83

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+ + A  E +H  +L+HDD+  +D   +RRG PT +  +D  TA++ G+ L+  AF +
Sbjct: 84  DAMHLAAITEMLHTATLVHDDV--IDESGLRRGHPTANATWDNPTAVLVGDYLIARAFNL 141

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +   ++     + S     +     L      Q+    +    E     I   KT  L  
Sbjct: 142 LVGFQSLPLLKLFSDGTCDIAEGEVL------QLQHQHNPQATEDDYMRIIDGKTSRLFM 195

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            A   G  +        +    FG++ G  FQ+ DD+LD   D  
Sbjct: 196 MAT-CGVAILQDKPEFMQPFSDFGQHFGNAFQIIDDVLDYTGDSE 239


>gi|124025385|ref|YP_001014501.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. NATL1A]
 gi|123960453|gb|ABM75236.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. NATL1A]
          Length = 323

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 12/200 (6%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHDDL 92
             L +A  +    GGK++R  +V   +          L+   +    E IH  SL+HDD+
Sbjct: 31  PILQAAAEHLFSAGGKRLRPGIVLLISRALTSEKELPLKHRKLAQITEMIHTASLVHDDV 90

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RRG  TVH ++D   A++AG+ L   A   +++ +      + S++++ L  
Sbjct: 91  --VDEADTRRGVETVHSRFDPRIAVLAGDFLFAQASWHLANLENLEVVKLLSRVIMDLAE 148

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
               QG+      +  D              KT +L+  + ++  +++   Q     L  
Sbjct: 149 GEIKQGL------NRFDSSQSFESYLEKSYCKTASLIANSSKAIGVLSDVDQESLNSLYF 202

Query: 213 FGENLGIIFQLADDLLDCEE 232
           FG  LG+ FQ+ DD+LD   
Sbjct: 203 FGRQLGLAFQVVDDILDFTG 222


>gi|88607980|ref|YP_506571.1| putative geranyltranstransferase [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600149|gb|ABD45617.1| putative geranyltranstransferase [Neorickettsia sennetsu str.
           Miyayama]
          Length = 256

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 86/232 (37%), Positives = 122/232 (52%), Gaps = 21/232 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           +  KLQ+ S+ I   L + L    S       D+L  AIRY+LL     IR FLV E  +
Sbjct: 3   VKKKLQKASRLIRETLKENLSLFPSE------DKLFQAIRYSLLAESSHIRGFLVLELGT 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LFN+ ++  + V AAIE IH +SLIHDDLP++DN   RR +P  HI + E TAI+AG+ L
Sbjct: 57  LFNIPYVDTIEVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L  A++++S   T L              +  +  M+ GQ+ D+            I KM
Sbjct: 117 LVLAYQMLSRYGTPLV----------QCTSKYVLEMITGQVHDVI--GSSTLTADEINKM 164

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           K+G+L   +C S   +A++ Q+E   L  FG  +GIIFQ  DD+ D   D  
Sbjct: 165 KSGSLFALSCSSVGHLANSGQSELTVLEAFGYEIGIIFQAVDDIKD--GDAK 214


>gi|307328645|ref|ZP_07607818.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
           4113]
 gi|306885757|gb|EFN16770.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
           4113]
          Length = 336

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 24/233 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L +  Q     ++   + LL  T S +       +  A ++ +  GGK+ R  LV   A 
Sbjct: 16  LEADTQAGLTAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVLLAAQ 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             + +    +     +E  H  +L HDD+  MD   +RRG  + ++++    A++ G+ L
Sbjct: 68  FGDPHAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVSSANVRWGNSVAVLTGDFL 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMI 180
              A  I++    +                   + ++ GQ+L+    +D          +
Sbjct: 126 FARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVEHYLDV 175

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTG+L+  +   GA+M+ A ++    L  +GE LG+ FQLADD+LD   D
Sbjct: 176 LAGKTGSLIAVSGRFGAMMSGADESIVSILTQYGERLGMAFQLADDVLDIASD 228


>gi|21225056|ref|NP_630835.1| polyprenyl synthatase [Streptomyces coelicolor A3(2)]
 gi|4539167|emb|CAB39696.1| putative polyprenyl synthatase [Streptomyces coelicolor A3(2)]
          Length = 378

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 87  GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGTVEAG--RATRRLTKASRSLIDGQAQDISYEHR 202

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 203 DR-VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLL 261

Query: 229 DCEED 233
               D
Sbjct: 262 GIWGD 266


>gi|115350537|ref|YP_772376.1| trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD]
 gi|170699961|ref|ZP_02890988.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
 gi|172059569|ref|YP_001807221.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
 gi|115280525|gb|ABI86042.1| Trans-hexaprenyltranstransferase [Burkholderia ambifaria AMMD]
 gi|170135109|gb|EDT03410.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
 gi|171992086|gb|ACB63005.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
          Length = 331

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 13  AHLLAPITSDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 66  GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + +
Sbjct: 124 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|126663213|ref|ZP_01734211.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38]
 gi|126624871|gb|EAZ95561.1| octaprenyl-diphosphate synthase [Flavobacteria bacterium BAL38]
          Length = 326

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 13/220 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVGAA 78
           +L  +      +     L     Y +   GK++R   V   A +           R  + 
Sbjct: 16  ELFEEKFRDSMSSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMVSGGSIDERTYRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S     
Sbjct: 76  IELIHTATLVHDDV--VDDSNKRRGFFSINALWKNKIAVLVGDFLLSKG--LLLSIDNND 131

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA- 197
            D ++   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA 
Sbjct: 132 FDLLK---IISVAVREMSEGELL-QIEKARRLDITEDIYYEIIRQKTATLIAACCSLGAC 187

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
            +A   +   E++R FGE +G+ FQ+ DDL D  +D + K
Sbjct: 188 SVAPDDKAVVEKMRKFGELIGMAFQIKDDLFDYTDDAIGK 227


>gi|146299544|ref|YP_001194135.1| polyprenyl synthetase [Flavobacterium johnsoniae UW101]
 gi|146153962|gb|ABQ04816.1| Polyprenyl synthetase [Flavobacterium johnsoniae UW101]
          Length = 325

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 13/218 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +   H        LL+ I Y +    GK++R   V   A +      +    R  + I
Sbjct: 17  LFEKKFHESMTSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMVSGGTVNERTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSIDNGDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D +R   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLLR---IISVAVREMSEGELL-QIEKARRLDITEDVYYEIIRKKTATLIAACCALGAKA 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
                 + E +R FGE +G+ FQ+ DDL D  E+ + K
Sbjct: 189 VIEDDVQVENMRMFGELIGMAFQIKDDLFDYSEEAIGK 226


>gi|170740966|ref|YP_001769621.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
 gi|168195240|gb|ACA17187.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
          Length = 345

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 24/240 (10%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLL----------SAIRYALL-GGKKIRSFL 57
           L++ S   +  L+DL+   AS M+  +   L               + +  GGK++R  L
Sbjct: 7   LEDTSSDPEASLNDLVALVASGMERVNAMILSRTGSDVAMIPEVANHLIASGGKRLRPIL 66

Query: 58  VTECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
               A L       A     +++ A++E +H  +L+HDD+  +D   +RRG+    I++ 
Sbjct: 67  TLATAQLCGYRAGEAGRDGDVKLAASVEFMHTATLLHDDV--VDESDMRRGRVAARIKWG 124

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              +++ G+ LL  AF+++    +     +R+  +LS    +  +G +  Q+   ++   
Sbjct: 125 NQASVLVGDFLLGQAFKMMVEVGS-----LRALDILSSAAAVIAEGEVM-QLGAAKNTET 178

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E +   + + KT  L   ACE G ++A   ++E    R +G NLG+ FQL DD LD   
Sbjct: 179 TEDEYLAVIRAKTAELFAAACEVGPVLAERPKSEAAACRSYGMNLGVAFQLIDDALDYGG 238


>gi|222152303|ref|YP_002561478.1| polyprenyl synthetase [Streptococcus uberis 0140J]
 gi|222113114|emb|CAR40511.1| polyprenyl synthetase [Streptococcus uberis 0140J]
          Length = 326

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 11/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           +PS   +  + I+  +  +     + +Q ++ +   + I+ +  GGK +R       +S 
Sbjct: 1   MPSYWSQYPE-IEKEIKAVTQLIENRVQVRNTEIEKAIIQLSQAGGKYLRPAFFFLFSSF 59

Query: 65  FNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                       ++ A++E +H  +L+HDD+  +D+  +RRG PT+  QY +  A+  G+
Sbjct: 60  GPYQKERKEQLQKIAASLEILHMATLVHDDV--IDDSPLRRGNPTIQTQYGKDVAVYTGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L T  FE+I    +    N     + + +    L G L  QM    ++           
Sbjct: 118 FLFTVFFELILESMS----NTPYMAINAKSMKKILVGEL-DQMHLYFNQKQSIRDYLRAI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             KT  L   A + GA  + A +         G ++G+ FQ+ DD+LD   D  
Sbjct: 173 SGKTAELFKLASQEGAYFSGADETVVRLAGRIGYHIGMTFQILDDILDYTADQK 226


>gi|296876934|ref|ZP_06900979.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912]
 gi|296432065|gb|EFH17867.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 15912]
          Length = 291

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           + +E   R++  +     + A          L+ ++ Y++  GGK++R  L+ E    F 
Sbjct: 2   RQEEKRNRVEKAVRSFYEEKA------VAPHLVESVLYSIQAGGKRLRPLLLLELLEAFG 55

Query: 67  VNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +       +V  A+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  LELTEAHFQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEALAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
             F +I +  + L D ++  L+L L+   G +GM+ GQ+LD++ E   +   ++  I   
Sbjct: 116 DPFGMIVA--SALPDAVKVSLILELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHAN 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KTG L+ +   +  ++     +  + L   G+ LG+ FQ+ DD+LD   D  
Sbjct: 174 KTGRLLAYPFIAAGLILELQADIGQLLEKIGKKLGLAFQVRDDILDLVADFE 225


>gi|261749413|ref|YP_003257099.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497506|gb|ACX83956.1| polyprenyl synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 325

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 10/223 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L++    I+  +     Q  + +++     +     Y +   GK+IR   V   A +   
Sbjct: 5   LEKVKGSINEEMKIFEKQFNAIIKSDVP-LINKITHYIVHRKGKQIRPMFVFLIAKMLGT 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    + IE IH  +L+HDD+  +DN Y+RRG  +++  +    A++ G+ LL+ +
Sbjct: 64  IQKKTYHTASLIELIHTATLVHDDV--IDNSYLRRGSFSINAIWKNKIAVLVGDYLLSKS 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             + +         I  + +  ++    L      QM   +   I E     I   KT +
Sbjct: 122 LLLATENNYHDLLKIICRTIKDMSEGELL------QMEKSKKLDITEKIYNQIIYHKTAS 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           L+  +CE GA   +A+++   ++R FG   GI FQ+ DDL D 
Sbjct: 176 LIAASCEGGARSVNANEDIALKMRKFGGLTGIAFQIKDDLFDY 218


>gi|326200897|ref|ZP_08190769.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988465|gb|EGD49289.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 335

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 7/202 (3%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
            L SA R+ +  GK +R+ ++             A+ + A  E +H +SL+ DD+  MD 
Sbjct: 34  PLYSAARHYMGKGKHLRALMLLLACGATGGEPSNAIDIAAGHEILHTFSLVQDDI--MDK 91

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGL 156
              RRG  TVHI+Y   TAI++ + L   AFE  + +      DN +   +L     +G+
Sbjct: 92  SEKRRGTDTVHIKYGLDTAILSADYLFLKAFESFNINFINHEFDNAKRSRLLKEILELGM 151

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +  GQ LD+  E    + E     +   KT       C  G I+A  S+     +   
Sbjct: 152 V-ICEGQFLDLNFERKFSLAEDDYLDMIYKKTAVFFEKVCTIGGIIADTSEENIHSISEM 210

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
           G+ LG+ FQ+ DD+L    D  
Sbjct: 211 GKCLGMAFQIKDDMLSFFGDEK 232


>gi|16126352|ref|NP_420916.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15]
 gi|13423600|gb|AAK24084.1| polyprenyl synthetase family protein [Caulobacter crescentus CB15]
          Length = 338

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 11/192 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  +    A L   ++    ++ AA+E IH  +L+HDD+  +D   +RRGK   
Sbjct: 56  AGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAA 113

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H+ +    +++ G+ L   AFE++    +     +++  +L+    +  +G +  Q++  
Sbjct: 114 HLIWGGAQSVLVGDFLFARAFELMVETNS-----MKALEILARASRVIAEGEVL-QLMRS 167

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  + +     I + KT  L   A E+GA+ A     + E LR +G NLG+ FQLADD 
Sbjct: 168 HDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDA 227

Query: 228 LDC---EEDLPK 236
           LD     E L K
Sbjct: 228 LDYGGATETLGK 239


>gi|121603663|ref|YP_980992.1| trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans
           CJ2]
 gi|120592632|gb|ABM36071.1| Trans-hexaprenyltranstransferase [Polaromonas naphthalenivorans
           CJ2]
          Length = 327

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 107/221 (48%), Gaps = 15/221 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + +D ++   L Q+   +  Q +  +++A      GGK++R  LV       +       
Sbjct: 20  RAMDAVIARRL-QSEVPLVAQVSQYIIAA------GGKRLRPALVLLMCGALDYRGAQRF 72

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + AF+++  
Sbjct: 73  NLAAVVEFIHTATLLHDDV--VDESTLRRGRSTANEIFGNPASVLVGDFLYSRAFQMMVE 130

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  ++R    L+   N+  +G +  Q++++ D  + E     + + KT  L   + 
Sbjct: 131 VG-----DMRIMQTLAEATNVIAEGEVL-QLMNMHDAGLTEAGYLRVIRSKTAKLFEASA 184

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
              A++A +S   ++    +G+ LG  FQ+ DD+LD + ++
Sbjct: 185 RLAALLAQSSPAVEQHCAEYGQALGTAFQVIDDVLDYDGEV 225


>gi|206561780|ref|YP_002232545.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315]
 gi|198037822|emb|CAR53766.1| octaprenyl-diphosphate synthase [Burkholderia cenocepacia J2315]
          Length = 331

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 13  AHLLAPITSDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 66  GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + +
Sbjct: 124 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 178 YKTAKLFEASARLGAVLAGADAPTEAAAAEYGRRVGTAFQIMDDWLDYAG 227


>gi|126730373|ref|ZP_01746184.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37]
 gi|126709106|gb|EBA08161.1| geranylgeranyl pyrophosphate synthetase [Sagittula stellata E-37]
          Length = 302

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 130/211 (61%), Gaps = 9/211 (4%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           S+  +     + +A+RYA+ GGK +R+F+V E A LF+++   A     AIE +H YSL+
Sbjct: 34  SYALSGVPGPVAAAMRYAVEGGKALRAFMVIEGARLFDIDRQHAAPAAGAIEALHAYSLV 93

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +RRGKPTVH ++DE TA++AG+ L   AF++++   T    + R +L+ 
Sbjct: 94  HDDLPCMDDDDMRRGKPTVHRKWDETTAVLAGDALQALAFQLVT--HTACPADRRLELVA 151

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            L    GL+GM+GGQ  DI  E     +   ++  +Q  KTGAL+ ++C +GA+MA  S 
Sbjct: 152 GLATAAGLRGMVGGQARDIAAESAQTPLTLEEITALQAGKTGALISWSCGAGAVMAGQST 211

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                LR +G+ LG+ FQ+ DD+LD E D  
Sbjct: 212 G---PLRRYGDCLGLAFQIWDDVLDVEGDAA 239


>gi|297201657|ref|ZP_06919054.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus
           ATCC 29083]
 gi|197710971|gb|EDY55005.1| heptaprenyl diphosphate synthase component II [Streptomyces sviceus
           ATCC 29083]
          Length = 336

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++   + LL  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALEADVQAGMTAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G
Sbjct: 65  AAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVDSANTRWGNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A  I++    +               +   + ++ GQ+L+    QD        
Sbjct: 123 DFLFARASHILADLGPEAV----------RVQSEAFERLVTGQILETAGPQDGRDPVEHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LDVLGGKTGSLVAVSCRFGAMMSGADERVVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|317420115|emb|CBN82151.1| Decaprenyl-diphosphate synthase subunit 1 [Dicentrarchus labrax]
          Length = 422

 Score =  167 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 21/239 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
           +  L       +K + ++ DD+  +          + L S   Y   G GK IR  +V  
Sbjct: 96  DAKLKDPFTLANKDLQSLFDDIRKELF-----VTKEELKSLCDYYFDGKGKAIRPIIVIL 150

Query: 61  CASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
            A   N++   A         +    E IH  SL+HDD+  +D    RRGK T++  + E
Sbjct: 151 MARALNIHSNRAGDLLPGQRALAMISEMIHTASLVHDDV--IDGSDKRRGKRTINDMWGE 208

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             AI+AG+ +L+ A  +++         + SQ++  L     +      Q+   ++E   
Sbjct: 209 RKAILAGDLILSAASVLLARIGNNAVVKVMSQVIEDLVRGEFM------QLGSKENENER 262

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                     KT +L+  +C++ +I+  +     E    +G+N+GI FQL DD+LD   
Sbjct: 263 FKHYLEKTFKKTASLIANSCKAVSILVTSDPEVHEIAYQYGKNVGIAFQLVDDVLDFTS 321


>gi|304570808|ref|YP_002517571.2| trans-isoprenyl diphosphate synthase [Caulobacter crescentus
           NA1000]
          Length = 336

 Score =  167 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 11/192 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  +    A L   ++    ++ AA+E IH  +L+HDD+  +D   +RRGK   
Sbjct: 54  AGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAA 111

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H+ +    +++ G+ L   AFE++    +     +++  +L+    +  +G +  Q++  
Sbjct: 112 HLIWGGAQSVLVGDFLFARAFELMVETNS-----MKALEILARASRVIAEGEVL-QLMRS 165

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  + +     I + KT  L   A E+GA+ A     + E LR +G NLG+ FQLADD 
Sbjct: 166 HDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDA 225

Query: 228 LDC---EEDLPK 236
           LD     E L K
Sbjct: 226 LDYGGATETLGK 237


>gi|21222966|ref|NP_628745.1| polyprenyl diphosphate synthase [Streptomyces coelicolor A3(2)]
 gi|289769814|ref|ZP_06529192.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
 gi|10129728|emb|CAC08284.1| putative polyprenyl diphosphate synthase [Streptomyces coelicolor
           A3(2)]
 gi|289700013|gb|EFD67442.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
          Length = 336

 Score =  167 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++   + LL  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALEADVQAGLVAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++D   A++ G
Sbjct: 65  SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSANTRWDNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A +I++    +                +  + ++ GQ+L+    QD        
Sbjct: 123 DFLFARASQILADLGPEAV----------RVQALAFERLVTGQILETAGPQDGRDPVDHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|149371556|ref|ZP_01890972.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49]
 gi|149355183|gb|EDM43743.1| octaprenyl-diphosphate synthase [unidentified eubacterium SCB49]
          Length = 325

 Score =  167 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 12/217 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVGAA 78
           +L  +      T     L     Y +   GK++R   V   A +      +    R  + 
Sbjct: 16  ELFEKKFRESMTSQVSLLNRITHYIVNRKGKQMRPMFVFLIAKMCDEGNVNERTYRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S     
Sbjct: 76  IELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSIDHGD 131

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            D ++   ++S+      +G L  Q+   +   I E   F I + KT  L+   C  GA 
Sbjct: 132 FDLLK---IISVAVREMSEGELL-QIEKARRLDITEEIYFEIIRQKTATLIAACCAMGAK 187

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +AS+ + E +R FGE +G  FQ+ DDL D   D  
Sbjct: 188 SVNASEGQVENMRAFGELIGTAFQIKDDLFDY-GDTA 223


>gi|163847417|ref|YP_001635461.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222525266|ref|YP_002569737.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
 gi|163668706|gb|ABY35072.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449145|gb|ACM53411.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
          Length = 345

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 10/231 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + ++++     ++  L         H+  ++ D   +        GK IR  LV    + 
Sbjct: 13  IQAEMRAAFPVVEGRLSRFYAMQEYHLGWRNEDLTPADAD----PGKLIRPQLVLLACAA 68

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +   AL + A I+ +H +SLIHDD+   D+  +RRG+ T+   +     I AG+ + 
Sbjct: 69  AGGDPQQALPLAAGIQLLHDFSLIHDDIE--DDSAMRRGRRTLWHIWGLAHGINAGDAMF 126

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQ 181
             A   I     +     R   +L     I L+ +  GQ LD+  E    I       + 
Sbjct: 127 VIAHLAIHRLSERGLPAERVLSILRRFDEIILR-ICEGQYLDLSFEGDLSITPADYLTMI 185

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT AL+  A E GA  A A       L  FG  +G+ FQ+ DD+L    
Sbjct: 186 GGKTAALIAGAAELGARAAGADGETVAALADFGRAVGLAFQIEDDILGIWG 236


>gi|326317942|ref|YP_004235614.1| geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374778|gb|ADX47047.1| Geranyltranstransferase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 306

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 9/222 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
             L +   +  +R++  L+       + +       L  A+RYA+LG GK++R  LV   
Sbjct: 15  FDLSAWSAQALQRVEEALE-------AWVPADAPGGLGDAMRYAVLGAGKRLRPLLVLAA 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   + +   ALR   ++E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ +  A++AG+
Sbjct: 68  AEAVSGHAGAALRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGQAQALLAGD 127

Query: 122 GLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
            L   AFE+++           R   +L+               L      + E ++  +
Sbjct: 128 ALQALAFELLTPEDDVPEAMQARLCRLLARAAGADGMAGGQAIDLASVGIALSEDELRRM 187

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            ++KTGAL+  +   GA    A+    + L  +G  LG+ FQ
Sbjct: 188 HRLKTGALLQSSVLMGAACGAAAPAAWDALSRYGAALGLAFQ 229


>gi|320354672|ref|YP_004196011.1| poluprenyl synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123174|gb|ADW18720.1| Polyprenyl synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 338

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 9/225 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL 64
           P  L+  +  +   ++  +    +      +  L   + YAL  GGK+IR  L   C+  
Sbjct: 9   PVDLRGTTATVTARVEAAMRHDLTTALAGCDPLLGEIVHYALFNGGKRIRPLLTVLCSRC 68

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +     ++ AA E +H  +L+HDD+  +D    RRG PTV  ++    AI+AG+ L 
Sbjct: 69  CGRDDAELYQLAAAFEYLHVATLVHDDV--IDRAEQRRGTPTVVARHGLTAAILAGDWLH 126

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
            ++  +I           R   +        + G    Q+  I D    E Q F + + K
Sbjct: 127 AHSMHLIGKLAGG-----RGLEIFCQATASMVNGEFA-QLRLIGDITGTEQQYFEVIRQK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           TG L+   C  GA+ A A +  +  L  +G+ +G  FQ+ DDLLD
Sbjct: 181 TGNLIRSTCSIGALFAGADEARRTALATYGDRIGAAFQVVDDLLD 225


>gi|21492720|ref|NP_659794.1| farnesyltranstransferase protein [Rhizobium etli CFN 42]
 gi|218515967|ref|ZP_03512807.1| farnesyltranstransferase protein [Rhizobium etli 8C-3]
 gi|21467145|gb|AAM54808.1| farnesyltranstransferase protein [Rhizobium etli CFN 42]
          Length = 309

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 12/220 (5%)

Query: 17  DTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTAL 73
           D +++  L     + +       L  A+  A+  GG ++R  L  + + +    +   A 
Sbjct: 14  DKLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELAT 73

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  + E  A++ G+ L+  AF+ +S 
Sbjct: 74  RAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYLS- 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
            +  L   + ++++  +   +G   G++ GQ +    E +    +      KTG+L   A
Sbjct: 133 LQAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFVAA 188

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              GA+ + A           GE LG  +Q+ADD+ D   
Sbjct: 189 ATCGALASGADP---APWSKVGELLGHAYQIADDIADTVG 225


>gi|302553460|ref|ZP_07305802.1| heptaprenyl diphosphate synthase component II [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471078|gb|EFL34171.1| heptaprenyl diphosphate synthase component II [Streptomyces
           viridochromogenes DSM 40736]
          Length = 336

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L +   ++     T+    L+ A      GGK+ R  LV   
Sbjct: 13  DQALEADVQAGLAAVEEGLFEA-TKSEVPFITEAAQHLVRA------GGKRFRPLLVMLS 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G+
Sbjct: 66  AQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVASANTRWGNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A   ++    +                   + ++ GQ+L+    QD         
Sbjct: 124 FLFARASHTLADLGPEAV----------RVQAEAFERLVTGQILETAGPQDGRDPVEHYL 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 174 DVLAGKTGSLVAVSCRFGAMMSGADETTVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|220964307|gb|ACL95663.1| trans-isoprenyl diphosphate synthase [Caulobacter crescentus
           NA1000]
          Length = 322

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 11/192 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  +    A L   ++    ++ AA+E IH  +L+HDD+  +D   +RRGK   
Sbjct: 40  AGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDV--VDGSQLRRGKVAA 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H+ +    +++ G+ L   AFE++    +     +++  +L+    +  +G +  Q++  
Sbjct: 98  HLIWGGAQSVLVGDFLFARAFELMVETNS-----MKALEILARASRVIAEGEVL-QLMRS 151

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  + +     I + KT  L   A E+GA+ A     + E LR +G NLG+ FQLADD 
Sbjct: 152 HDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDA 211

Query: 228 LDC---EEDLPK 236
           LD     E L K
Sbjct: 212 LDYGGATETLGK 223


>gi|327274790|ref|XP_003222159.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Anolis
           carolinensis]
          Length = 350

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 17/221 (7%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA------ 72
           L +L       ++    D L     Y   G GK  R  +V   A   N +H ++      
Sbjct: 38  LKNLYEDIQKELRASTTD-LREMCEYYFDGKGKAFRPMIVVLMARACNFHHKSSGEVQAS 96

Query: 73  -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
              +    E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+ +L  A + +
Sbjct: 97  QRSIALIAEMIHTASLVHDDV--IDDANSRRGKLTVNHVWGERKAVLAGDFILAVASQTL 154

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +        ++ ++ +  L     L      Q+   ++E             KT +L+  
Sbjct: 155 ARIGNTTIVSVLTRAIEDLVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIAH 208

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +C++ +I+A       E    +G+N+GI FQL DD+LD   
Sbjct: 209 SCKAVSILACPDPKVHEIAYQYGKNIGIAFQLIDDVLDFTS 249


>gi|281204458|gb|EFA78653.1| hypothetical protein PPL_08108 [Polysphondylium pallidum PN500]
          Length = 417

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 20/210 (9%)

Query: 32  QTQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNH-------LTALRVGAAIECI 82
            TQ    LL +I   Y  + GK+IR  ++   A     N         + L++   +E +
Sbjct: 90  PTQLTHPLLKSIGTYYFEMKGKRIRPTVLLLLARAITSNDCPSEPISESQLKLAQVVEML 149

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+HDD+  +D    RR   +V+  Y    AI+ GN L      ++S+ +      +
Sbjct: 150 HTASLVHDDV--IDGADTRREMASVNCAYSNKLAILCGNFLTARTIVLLSTLRNHHVTEL 207

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S ++           ++ G+++ I+              +KT +L    C S A+++ A
Sbjct: 208 VSNII---------SDLVDGELMQIKSNSTSFESYIRKTYLKTASLFANGCRSIAVLSGA 258

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             N       FG+NLG+ FQ+ DDLLD   
Sbjct: 259 DANMTNMATEFGKNLGLAFQIIDDLLDVTG 288


>gi|291236349|ref|XP_002738102.1| PREDICTED: PDSS1 protein-like [Saccoglossus kowalevskii]
          Length = 403

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 17/239 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
           N      + + +K  ++ L  +       + T  ++ L     Y   G GK  R   V  
Sbjct: 73  NSSPKEAVTDPTKLTESELSQVCTNIKKELNTSKHN-LNEISHYLFDGKGKAFRPMTVLL 131

Query: 61  CASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
            A   N +         +   V    E IH  SLIHDD+  +D    RRGK  V+  + +
Sbjct: 132 SAKACNYHSGLSTQVTQSQREVAMIAEMIHTASLIHDDV--IDAADTRRGKAAVNEIWGQ 189

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             AI+ G+ +L+ +  +++    +    + SQ +  L     +      Q+   +DE   
Sbjct: 190 KNAILVGDFILSKSSALLARIGNKEVVIVISQAIDDLVRGEFM------QLGSKEDENER 243

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                     KT +L+  +C++ +I++  +    E    +G N+GI FQL DD+LD   
Sbjct: 244 FAHYLQKTYKKTASLIANSCKAVSILSGCNPAIVEITYQYGRNMGIAFQLVDDMLDYIS 302


>gi|16801851|ref|NP_472119.1| hypothetical protein lin2790 [Listeria innocua Clip11262]
 gi|16415326|emb|CAC98016.1| lin2790 [Listeria innocua Clip11262]
          Length = 326

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 22/235 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I++ +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIESNI----QIRDKHVEKNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPEFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLSRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
             KT  L   +C SGA  + A +    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 173 SGKTAQLFALSCYSGATGSKAPRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 227


>gi|289449928|ref|YP_003475509.1| geranyltranstransferase family protein [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289184475|gb|ADC90900.1| geranyltranstransferase family protein [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 336

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 21/223 (9%)

Query: 26  QTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN---------HLTALRV 75
           Q A+    +    L  AI YA L GGK++R  L      + +                 +
Sbjct: 58  QEAAGNGDKTVSELDLAITYAMLAGGKRLRPTLAVLVYEMLSRQTLPTKSETWPDALKYL 117

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E IH YSLIHDDLP+MDN  +R G+PT+H  + E  AI+ G+ LL+ A++  +   
Sbjct: 118 IRAVESIHIYSLIHDDLPAMDNDSLRHGRPTLHTFFSEGQAILVGDALLSEAWQYATKTD 177

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFAC 193
                 I +Q  L+         M+ GQ  D    D+ +    +  + K KT AL+    
Sbjct: 178 NVEAGMILAQNALA---------MVHGQWRDLAFTDQKVTYQDLCEMVKRKTAALIAAPV 228

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + A +  A    K +L  F ENLGI FQ+ DD+LD E +  +
Sbjct: 229 LAAATLTEADAPTKRQLSQFAENLGIAFQIRDDILDVEAESER 271


>gi|149187005|ref|ZP_01865313.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21]
 gi|148829394|gb|EDL47837.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. SD-21]
          Length = 338

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L   +     ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 57  GGKRLRPMLTLAGAELVGYSGTRHHKLAAAVEFIHTATLLHDDV--VDGSDLRRGKAAAN 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +     ++ G+ L + +FE+++   +     ++   +LS    I  +G +  Q+   +
Sbjct: 115 IIFGNPATVLVGDFLFSRSFELMTEDGS-----LKVLKILSGASAIIAEGEV-DQLTAQR 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E +   I + KT AL   A    A++A  S+ E++ L  +G NLG+ FQL DD L
Sbjct: 169 KIDTSEQRYLHIIRAKTAALFAAASRIAAVVAECSEEEEQSLDEYGRNLGVAFQLVDDAL 228

Query: 229 DCEEDLP 235
           D + D  
Sbjct: 229 DYDSDAA 235


>gi|154152049|ref|NP_001093801.1| decaprenyl-diphosphate synthase subunit 1 [Bos taurus]
 gi|151556844|gb|AAI49262.1| PDSS1 protein [Bos taurus]
          Length = 418

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  A         +    E IH  SL+H
Sbjct: 123 ELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVH 182

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 183 DDI--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 240

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 241 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEI 294

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 295 AYQYGKNVGIAFQLIDDVLDFTS 317


>gi|16081558|ref|NP_393914.1| bifunctional short chain isoprenyl diphosphate synthase related
           protein [Thermoplasma acidophilum DSM 1728]
 gi|10639606|emb|CAC11578.1| bifunctional short chain isoprenyl diphosphate synthase related
           protein [Thermoplasma acidophilum]
          Length = 322

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 18/219 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNHLTALRVGA 77
           ++++  +    ++++  D L    RY +  GGK+ R  L         +  +   L +  
Sbjct: 11  VEEVNARLLETVKSEEPD-LDRMARYTIEAGGKRFRPLLTILAYESSTDEPYFKILDLAT 69

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SLIHDD+  +DN  +RRG+PT+  +     AI+  + L   A+E+ S     
Sbjct: 70  GYELIHTASLIHDDI--IDNSPMRRGRPTLSYKEGVNNAIVVADYLFAKAYELGSRYGP- 126

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACE 194
                    ++S         +  GQ+L+  +     I E   + I + KT         
Sbjct: 127 ---------IVSKVMADASSRLAEGQILEAVNLGNLNISEDTYYRIIENKTAHFFEACAR 177

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              I A+A  N +  L  F  NLG+ FQ+ DD+LD   D
Sbjct: 178 GATIAANADLNTRNMLSGFAFNLGMAFQVTDDILDITGD 216


>gi|291454079|ref|ZP_06593469.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291357028|gb|EFE83930.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 383

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 17/228 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  + +DT+   +      H   +    L S       GGK +R  LV            
Sbjct: 64  ELRRAVDTLPAPVRRVARYHFGWEDAAGLPSGAN----GGKAVRPALVLAAVHALGGRPE 119

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            ALR  AA+E  H ++L+HDD+  +D    RR +PT    + +  AI+AG+ L + A + 
Sbjct: 120 RALRSAAAVELTHNFTLLHDDV--IDRDRTRRHRPTAWTVFGDADAILAGDALQSLAQQW 177

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKT 185
           ++           ++L         +  +  GQ  D   E      +   +   + + KT
Sbjct: 178 LAEDPHPRAGAAVARL------ARCVIELCAGQHTDCALEDRAPTEVSLDECLTMAESKT 231

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  AC  GA+ A A  ++   L  FG   G+ FQL DD++    D
Sbjct: 232 GALLGCACALGALHADAEPDQVNALDAFGREAGLAFQLIDDIIGIWGD 279


>gi|257387323|ref|YP_003177096.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169630|gb|ACV47389.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 281

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 21/231 (9%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
             LQ    R++  L+ +L            D L   +R+ AL GGK++R  +        
Sbjct: 3   EYLQRRRDRVEERLEAVL-------DGVEPDELADEVRHVALAGGKRVRPTVTVLVCEAL 55

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A+     IE +H  SL+ DD+  +D   +RRG P+    +    AIIA +GLL 
Sbjct: 56  GGEPADAVEFAVGIELVHNASLVIDDI--IDESDVRRGTPSAWAAFGHGPAIIASDGLLG 113

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AF + SS +  +                 +  +  G+  ++  +  +ET+   + + KT
Sbjct: 114 EAFALFSSDERAM-----------QAVTESMVELGEGEATELVSQPTNETEYIELARRKT 162

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GAL   A E GAI A A     E    + E +G+ FQ+ DD+LD   D  K
Sbjct: 163 GALFRAAAELGAIAADADAYTVEAFGQYAERVGVAFQMRDDVLDATADAEK 213


>gi|319443088|ref|ZP_07992244.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile
           DSM 44702]
          Length = 338

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 25/238 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   + E   R+++ L D L    S +  +           AL GGK+ R       
Sbjct: 16  DAALNDFIAEGMTRVESTLQDSLSTGESFLTDKVQ-------HLALAGGKRFRPMFALLA 68

Query: 62  ASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +     A   +     +E  H  +L HDD+  MD    RRG  + + ++D   AI+
Sbjct: 69  SRYGSTPETAAQTVVNAAVVVELTHLATLYHDDV--MDEADRRRGSESANARWDNSVAIL 126

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--- 175
           AG+ +   A  I++            + +       G   ++ GQM +       E    
Sbjct: 127 AGDFIFAVASSIMADLGP--------ETVRHFAETFG--ELVTGQMRETVGCPEGEDPVD 176

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               + + KTG L+  A   G++   A   +++ L  FG +LG +FQ+ DD++D   D
Sbjct: 177 HYMTVIQEKTGVLIASAGFLGSMHGGAPVEQRDALFRFGRHLGQVFQIVDDIIDVWSD 234


>gi|110669136|ref|YP_658947.1| multifunctional long-chain (E)-prenyl diphosphate synthase
           [Haloquadratum walsbyi DSM 16790]
 gi|109626883|emb|CAJ53352.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase
           [Haloquadratum walsbyi DSM 16790]
          Length = 271

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 19/218 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           ++  L+ ++      + +            AL GGK++R  +              A+  
Sbjct: 2   VEDRLESVVDAIDPAVLSD------EVAHVALSGGKRVRPAVTILACEACGGAPEDAVDF 55

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E +H  SL+ DD+  +D   +RRG  +    +    A+IA +GLL  AF ++++ +
Sbjct: 56  AVAVELVHNASLVVDDI--IDRSDVRRGTESAWSAFGHGPALIASDGLLGEAFALLAADE 113

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                        +      +  +  G+  ++     +E +   + + KTGAL   + E 
Sbjct: 114 H-----------ATEIVAESMVELGEGEATELVARPTNEAEYMQLARRKTGALFRASAEV 162

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GA+   A     +    + E +G+ FQ+ DD+LD   D
Sbjct: 163 GAVAGGADPFTIDLFGEYAERVGVAFQIRDDVLDATAD 200


>gi|296481448|gb|DAA23563.1| prenyl diphosphate synthase, subunit 1 [Bos taurus]
          Length = 418

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  A         +    E IH  SL+H
Sbjct: 123 ELREMSEYHFDGKGKAFRPIIVVLMARACNIHHNNARNVQASQRAIALIAEMIHTASLVH 182

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 183 DDI--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 240

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 241 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEI 294

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 295 AYQYGKNVGIAFQLIDDVLDFTS 317


>gi|74100798|gb|AAZ99643.1| isoprenyl diphosphate synthase [Streptomyces maritimus]
          Length = 336

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++   + LL  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALEADVQAGLVAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++D   A++ G
Sbjct: 65  SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSANTRWDNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A +I++    +                +  + ++ GQ+L+    QD        
Sbjct: 123 DFLFARASQILADLGPEAV----------RVQALAFERLVTGQILETAGPQDGRDPVDHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +   GA+M+ A +   E L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LDVLSGKTGSLVAVSSRFGAMMSGADETVVEVLTQYGERLGVAFQLADDVLDIASD 228


>gi|11499146|ref|NP_070380.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM
           4304]
 gi|2649009|gb|AAB89695.1| octaprenyl-diphosphate synthase (ispB) [Archaeoglobus fulgidus DSM
           4304]
          Length = 292

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 17/215 (7%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           I +D L +    ++     ++   + YA+  GGK+ R  +V   A L   ++   + +  
Sbjct: 10  IFEDSLKKFVESVEAT--PKIKKGLAYAITAGGKRSRPVIVLLSAKLCGGDYADVMNLAL 67

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           ++E IH  SL+HDD+  +D    RR +  +H +YD   AI+ G+ L++ + E+ S     
Sbjct: 68  SVELIHTASLVHDDV--IDKAEKRRKREALHKKYDISLAIVLGDWLISKSVELTSKYG-- 123

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACES 195
                  + ++    N+G+  M  G++LDI    E   E   F   + KT AL  ++ +S
Sbjct: 124 -------EEIIRDFSNVGMM-MSEGEVLDIYSIKENFTEKDYFECIEKKTAALFAYSAKS 175

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +    +   ++L  +G NLGI +Q+ DDLL+ 
Sbjct: 176 ACKIVCEDRIAADKLFDYGLNLGIAYQIVDDLLEY 210


>gi|315223294|ref|ZP_07865155.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
 gi|315187726|gb|EFU21480.1| putative geranyltranstransferase [Streptococcus anginosus F0211]
          Length = 300

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 124/236 (52%), Gaps = 15/236 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K  E   RI   ++    Q A          L+ AI Y++  GGK+IR  L+ E      
Sbjct: 2   KQDEKLARIGQAIETFYAQKAVSAD------LIEAILYSVNAGGKRIRPLLLLELLEGLG 55

Query: 67  VNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +       +V AA+E IH  SLIHDDLP+MD+   RRG+   H ++ E  AI+AG+ L  
Sbjct: 56  MELTEAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLPSHKKFGEAMAILAGDSLFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
            ++ +I+     L   I+  L+  L+   G  GM+GGQ+LD+Q E   I   ++  I   
Sbjct: 116 DSYALIAEAA--LPSQIKVNLIAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQTIHAN 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           KTG L+ +   +  ++A   ++++E+L+  G+ LG+ FQ+ DD+LD     EDL K
Sbjct: 174 KTGKLLTYPFIAAGLIAEVGESQQEKLKAIGQLLGLAFQVRDDILDITANFEDLGK 229


>gi|213962477|ref|ZP_03390739.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
 gi|213954803|gb|EEB66123.1| polyprenyl synthetase [Capnocytophaga sputigena Capno]
          Length = 327

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 15/220 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNH---LTALRVGAA 78
           L +            LL+ I Y +    GK++R   V   A + + +        R  + 
Sbjct: 17  LFEQKFRNSMSSKVALLNRITYYIVNRKGKQMRPMFVFLVAKMLSDDSKVSERTYRGASV 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S     
Sbjct: 77  IELIHTATLVHDDV--VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSIDNGD 132

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            D +R   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA 
Sbjct: 133 FDLLR---IISVAVREMSEGELL-QIEKARRLDIVEDVYYEIIRQKTATLIAACCAMGAC 188

Query: 199 MAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
                     E++R FGE +G+ FQ+ DDL D  ED + K
Sbjct: 189 SVQPEQPELIEKMRLFGEYIGMAFQIKDDLFDYTEDAIGK 228


>gi|268323767|emb|CBH37355.1| putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           (GGPS) [Includes: Dimethylallyltranstransferase ;
           Geranyltranstransferase ; Farnesyltranstransferase ]
           [uncultured archaeon]
          Length = 357

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 32/261 (12%)

Query: 1   MNGGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           M   +   + +   +I+  L    D  ++ AS +     + +++   Y L GGK++R   
Sbjct: 1   MAADIDGVVAQYQAKINERLGWFFDEKIEEASKISDYTQEVVVNIKEYTLRGGKRLRPIF 60

Query: 58  VTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVH-------- 108
           +         +++ A+   +  IE +  Y LIHDD+  MD   +RRGKPT H        
Sbjct: 61  LIYGYKCITEDNIDAIIEASISIELMQSYLLIHDDI--MDEDELRRGKPTFHIEYENICA 118

Query: 109 --------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS-QLMLSLTHNIGLQGM 159
                    ++ E  AI+AG+ L  Y  +++++ + + +   R+ Q    +  N+G    
Sbjct: 119 TLFGDDDTRKFGENIAILAGDLLEAYGIDVLTNSRFKEEYITRALQKYAEIVKNVG---- 174

Query: 160 LGGQMLDIQDE---FIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGE 215
             GQ+LDI  E    I E ++  I K+KT    +    + GAI+A A + +   +  +G 
Sbjct: 175 -YGQILDIMSEKKKDITEAEILRIHKLKTASYTIENPLQIGAILAGAVEADLAVMSNYGL 233

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
            LG+ FQ+ DD+L       K
Sbjct: 234 PLGLAFQIQDDILGLFGTEEK 254


>gi|48478271|ref|YP_023977.1| farnesyl pyrophosphate synthetase/
           geranyltransferase/farnesyltransferase/hexaprenyl
           diphosphate synthase [Picrophilus torridus DSM 9790]
 gi|48430919|gb|AAT43784.1| farnesyl pyrophosphate synthetase/
           geranyltransferase/farnesyltransferase/hexaprenyl
           diphosphate synthase [Picrophilus torridus DSM 9790]
          Length = 328

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 23/226 (10%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS-LFNVNHLTALRVGA 77
           + ++  +    +QT     L    RY +  GGK+ R  L           ++   L + A
Sbjct: 15  IAEINQRLLDSIQTDE-KYLYDMARYTIEAGGKRFRPLLTILSFEIASGESYEKILDLAA 73

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SLIHDD+  +D+  +RRG+ T+  +     AI+ G+ L   A+E+ S    +
Sbjct: 74  GYELIHTASLIHDDI--IDHSDMRRGRYTLSYKEGINNAIVVGDYLFAKAYELGSRYGKE 131

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACE 194
           +          S         +  GQ+L+ ++     ++E     I + KT      AC 
Sbjct: 132 V----------SKIMADASSNLAEGQILEAENIGNLNMNEETYLKIIENKTARFF-AACA 180

Query: 195 SGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            GA   A A      RL  F  N+G+ FQ+ DD+LD      D+ K
Sbjct: 181 LGATKAAGADFEISNRLSNFAYNMGMAFQITDDILDIIGNEKDMGK 226


>gi|156742295|ref|YP_001432424.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156233623|gb|ABU58406.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 349

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 12/236 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLV 58
              +P+ L +  +R D +L+D+  + +            L +A  Y +  GGK++R+ LV
Sbjct: 22  TRTMPTGLGDILRRAD-LLNDMADVERQMLARTISRAPLLTAAGTYTVAAGGKRLRAALV 80

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
             CA L   +   AL    AIE +H  SLIHDDL  +D+   RRG  TVH ++D   A++
Sbjct: 81  LLCARLGMYDPSRALHPAIAIELLHAASLIHDDL--VDHAGQRRGHVTVHSRWDADVALL 138

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+      F  +++ +   + + R     +      ++G L   +  I+   I   Q +
Sbjct: 139 LGDY-----FFALAANELAAEPDPRIIAFYTSAAQTMVEGELN-PVTQIEPLAIAVEQYY 192

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                KT  L   AC++G  +A     + E L  FG +LG+ FQ+ DD+LD   D 
Sbjct: 193 RKIGCKTAVLFEAACKAGIAVAGGDDAQIETLGRFGYDLGLAFQIVDDVLDYTGDE 248


>gi|50954065|ref|YP_061353.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950547|gb|AAT88248.1| trans-hexaprenyltranstransferase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 353

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 19/228 (8%)

Query: 13  SKRIDTILDD--LLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLVTECASLFNVN 68
           ++++ T +DD   L++ A H + +  D L     RY L  GGK++R  L    A L   N
Sbjct: 23  ARQVATAVDDGLALVEEALHREVRFADNLADVTTRYLLEAGGKRVRPMLTLLTAQLGKGN 82

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L+   A+E  H  SL HDD+  MD+  +RRG PT    +    A++ G+ L   A 
Sbjct: 83  TPEVLQAAQAVEITHLASLYHDDV--MDDSQMRRGVPTAQFVWGNSVAVLTGDLLFARAS 140

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KT 185
           +++SS   +                   + +  GQ+ +       E  V    ++   KT
Sbjct: 141 KLVSSLGER----------AIQLQADTFERLCLGQLHETIGPQDGEDAVAHYIRVLEDKT 190

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           G+L+  A + G + + A  + +E +  FGE +G+ FQL DD++D   +
Sbjct: 191 GSLIAVAAQMGIVFSGADSSYEEPVVTFGEKIGVAFQLIDDVIDLSSE 238


>gi|68304932|gb|AAY89943.1| predicted octaprenyl-diphosphate synthase [uncultured bacterium
           BAC13K9BAC]
          Length = 319

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 11/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L++ SK + + L+ L +       T  +     +      GGK+IR  ++   + LF  N
Sbjct: 4   LKQISKSLHSDLEKLNIFLKKATSTDVSLINNLSSHMIESGGKRIRPIILMLFSRLFK-N 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +  GA +E IH  +L+HDD+  +D   IR    T +  + + +A++ G+ L + AF
Sbjct: 63  EKNVIEAGAILELIHAATLLHDDV--VDQSDIRHNIKTANKLWGDDSAVLVGDFLYSRAF 120

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E+I     +    I ++    ++    +Q M+  +++D  D+         I  +KTG L
Sbjct: 121 ELIVDINKEKVYKILAETTNQISQGEVIQLMVKDKIIDNTDK------YLNIIYLKTGKL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
              +    + +A    N  +  + FG+N GI +QL +D LD   D 
Sbjct: 175 FEASAAVASELAGG--NYIDNAKSFGKNFGIAYQLRNDYLDYFGDE 218


>gi|291435805|ref|ZP_06575195.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
 gi|291338700|gb|EFE65656.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
          Length = 379

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 88  GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 145

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T   D  R+   L+      + G       + +
Sbjct: 146 KVHGPAQAILVGDALFALANEVLLELGT--VDAGRAARRLTTASRALIDGQAQDISYEHR 203

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 204 DR-VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVDDLL 262

Query: 229 DCEED 233
               D
Sbjct: 263 GIWGD 267


>gi|120434721|ref|YP_860408.1| polyprenyl synthetase [Gramella forsetii KT0803]
 gi|117576871|emb|CAL65340.1| polyprenyl synthetase [Gramella forsetii KT0803]
          Length = 325

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 12/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVGAA 78
           DL  +      +     L     Y +   GK++R   V   A +      +    R  + 
Sbjct: 16  DLFEKKFFESMSSKVALLNRITHYIVNRKGKQMRPMFVFLVAKMVSEGSVNERTYRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S     
Sbjct: 76  IELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSIDNND 131

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            D ++   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA 
Sbjct: 132 FDLLK---IISVAVKEMSEGELL-QIEKARRLDITEAVYYDIIRQKTATLIAACCSLGAA 187

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
                 NE  ++R FGE +G+ FQ+ DDL D   + + K
Sbjct: 188 SVKPESNEIAKMRRFGELIGMAFQIKDDLFDYGTQKIGK 226


>gi|322389034|ref|ZP_08062602.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903]
 gi|321144257|gb|EFX39667.1| geranyltranstransferase [Streptococcus parasanguinis ATCC 903]
          Length = 291

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 12/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           + +E   R++  +     + A          L+ ++ Y++  GGK++R  L+ E    F 
Sbjct: 2   RQEEKRNRVEQAVRSFYEEKA------VAPHLVESVLYSIQAGGKRLRPLLLLELLEAFG 55

Query: 67  VNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +       +V  A+E IH  SLIHDDLP+MDN   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  LELTEPHFQVAGALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFGEDLAILAGDALFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
             F +I++  + L D ++  L+  L+   G +GM+ GQ+LD++ E   +   ++  I   
Sbjct: 116 DPFGMIAA--SALPDAVKVSLIFELSDASGSRGMVAGQVLDMEGEHKQLTLAELQTIHAN 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KTG L+ +   +  ++     +  + L   G+ LG+ FQ+ DD+LD   D  
Sbjct: 174 KTGRLLAYPFIAAGLILELQADIGQLLEKIGKKLGLAFQVRDDILDLVADFE 225


>gi|302557115|ref|ZP_07309457.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
 gi|302474733|gb|EFL37826.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
          Length = 378

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 87  GGKAVRPALAVLSAEVTGAAPETGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 144

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    +      R+   L+      + G       + +
Sbjct: 145 KVHGPAQAILVGDALFALANEVLLELGSVEAG--RATRRLTAASRALIDGQAQDISYEHR 202

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 203 DR-VSVEECLEMEGNKTGALLACASSIGAVLGGADDRTADALERYGYHLGLAFQAVDDLL 261

Query: 229 DCEED 233
               D
Sbjct: 262 GIWGD 266


>gi|327193306|gb|EGE60211.1| farnesyltranstransferase protein [Rhizobium etli CNPAF512]
          Length = 309

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 12/220 (5%)

Query: 17  DTILDDLL-LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTAL 73
           D +++  L     + +       L  A+  A+  GG ++R  L  + + +    +   A 
Sbjct: 14  DKLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKVSYVCGEKDPELAT 73

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  + E  A++ G+ L+  AF+ +S 
Sbjct: 74  RAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLTGDALIVMAFKYLS- 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
            +  L   + ++++  +   +G   G++ GQ +    E +    +      KTG+L   A
Sbjct: 133 LQAALTPELGARMIEVVAEAVGPSHGLIAGQSM----EAMTHVPIDRYHHYKTGSLFVAA 188

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              GA+ + A           GE LG  +Q+ADD+ D   
Sbjct: 189 ATCGALASGADP---APWSKVGELLGHAYQIADDIADTVG 225


>gi|330815463|ref|YP_004359168.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3]
 gi|327367856|gb|AEA59212.1| Octaprenyl-diphosphate synthase [Burkholderia gladioli BSR3]
          Length = 332

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 11/223 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLL--SAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           ++ +  I+DD+         +  +D LL      Y +  GGK++R  L+   A       
Sbjct: 14  AQLLAPIVDDMEQVNRVIRHSLSSDVLLINQIAEYIIGAGGKRLRPALLLLVAGALGDGS 73

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L + +FE
Sbjct: 74  SHRHTLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDYLYSRSFE 131

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++          +R   +LS    I  +G +  Q+L++ D  +DE++   + + KT  L 
Sbjct: 132 MMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDESRYMQVIRYKTAKLF 185

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   GA++A A  + +     +G  +G  FQ+ DD LD   
Sbjct: 186 EASARLGAVLAGADASTEAAAAEYGRRIGTAFQIMDDWLDYAG 228


>gi|241888826|ref|ZP_04776132.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans
           ATCC 10379]
 gi|241864502|gb|EER68878.1| heptaprenyl diphosphate synthase component 2 [Gemella haemolysans
           ATCC 10379]
          Length = 315

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 19/235 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFN- 66
           L++    +  +L+D+   T S     ++++L   ++ Y L GGK++R  L+  CA L N 
Sbjct: 2   LKQYDTLVHEVLEDIFEITRS-----NDEQLDEIVKKYFLNGGKRVRVLLLLMCAKLGNF 56

Query: 67  -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            +N    +R+ + +E IH  SLIHDD+  +DN   RRG  T++ +Y    A+  G+ L +
Sbjct: 57  ELNKKDIIRMASIVEIIHTASLIHDDI--IDNADTRRGSVTMNKEYSNEFALRVGDYLFS 114

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
              + ++       DN +  L L+ T      G L  Q   + D            K KT
Sbjct: 115 VVLKEVAK-----FDNEKIHLYLAETLKELCIGELI-QADGLYDIKTRRLDYLKKIKRKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
             L+ FAC +G+I+A AS  +      +G  LG+ +Q+ DD LD     ++L K+
Sbjct: 169 AILIAFACVAGSIVADASDEDIRSAFSYGYYLGMSYQIIDDYLDFVGGTQNLGKE 223


>gi|119502964|ref|ZP_01625049.1| Conserved hypothetical phage tail region protein [marine gamma
           proteobacterium HTCC2080]
 gi|119461310|gb|EAW42400.1| Conserved hypothetical phage tail region protein [marine gamma
           proteobacterium HTCC2080]
          Length = 321

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 113/234 (48%), Gaps = 17/234 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   + + + +  ++++ ++ + L    + ++            Y +  GGK++R  L  
Sbjct: 1   MITSIRACVADEFQQVNELIIEQLKSDVAMVENVG--------HYIVDAGGKRLRPLLAL 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             AS      L+ ++  A +E IH  +L+HDD+  +D   +RRG+ T + ++    +++ 
Sbjct: 53  LAASAQGGVDLSDIKFAAVVEFIHTATLLHDDV--VDLSSLRRGRATANAEFGNAPSVLV 110

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ + T AF+++      L D    Q M   T+ I    +L  Q++   D  + E+Q   
Sbjct: 111 GDFIYTRAFQLMVK----LGDLSLLQSMADTTNTIAAGEVL--QLMRAGDPSVTESQYLD 164

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   KT AL   AC   AI+      ++E++  +G +LGI FQ+ DD+LD   D
Sbjct: 165 VIDRKTAALFAAACRGSAILKGRDTTQQEQMAAYGRHLGIAFQMIDDVLDYTGD 218


>gi|311265743|ref|XP_003130800.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 1
           [Sus scrofa]
          Length = 410

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 115 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVH 174

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 175 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 232

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 233 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEI 286

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 287 AYQYGKNVGIAFQLIDDVLDFTS 309


>gi|313893153|ref|ZP_07826730.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442506|gb|EFR60921.1| polyprenyl synthetase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 323

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 18/225 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E  +RI   L+ +    AS   T   D   L+  +  +  GGK++R+ L    A+     
Sbjct: 8   EIMERIALDLEGVEESLASSFNTGAEDFNALIRPL--SAAGGKRLRAQLCLLIANAGTSV 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +R+  A+E +H  +LIHDD+  +D   IRRG+ T+H+      AI++G+ L   AF
Sbjct: 66  ERQRIRIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKT 185
           +I+S        N++   + S      +  ++ G+ + ++D +       +     + KT
Sbjct: 124 QIVSEM-----PNMKYLQIFSH----IITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKT 174

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              M    E G ++   S++E   L+ +G  LG+ FQ+ DD++D 
Sbjct: 175 ADFMEGCMELGGLLGGWSESEIVELKKYGHALGMAFQITDDIMDY 219


>gi|134294668|ref|YP_001118403.1| trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4]
 gi|134137825|gb|ABO53568.1| Trans-hexaprenyltranstransferase [Burkholderia vietnamiensis G4]
          Length = 331

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 13  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 65

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 66  GALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRQTANALFGNAASVLVGDY 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE++   + +
Sbjct: 124 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDESRYMQVIR 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA+++ A    +     +G  +G  FQ+ DD LD   
Sbjct: 178 YKTAKLFEASARLGAVLSGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|148653898|ref|YP_001280991.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1]
 gi|148572982|gb|ABQ95041.1| farnesyl-diphosphate synthase [Psychrobacter sp. PRwf-1]
          Length = 311

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 18/214 (8%)

Query: 36  NDRLLSAIRYALLG-GKKIRSFLV-------TECASLFNVN-----HLTALRVGAAIECI 82
              L  A  YA+ G GKK+R  LV          +    ++          R   A+E +
Sbjct: 33  PSPLHEACHYAMTGQGKKVRPLLVASSYLTVLASSQAATIDTLPLFDDNCRRAMLAVEFL 92

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-- 140
           H YSLIHDDLP MD+  +RRG+PT HI++ E TA++AG+ L T AFE +S+         
Sbjct: 93  HTYSLIHDDLPCMDDDDLRRGRPTCHIKFGEATALLAGDVLQTLAFEALSADLPGFAPIS 152

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAI 198
           N ++  +L+L      + M+ GQMLD+  E   + + Q+  I + KTGAL+  A   GA 
Sbjct: 153 NDKAASLLTLF-APRARRMVSGQMLDLNAENKQVSQPQLEAIHRDKTGALIEAAVLMGAA 211

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A A+  + + +  F  N+G+ FQ+ DD+LD   
Sbjct: 212 CADANDTQYQAITSFASNVGLAFQVQDDILDVTS 245


>gi|291191909|gb|ADD83016.1| PtnT4 [Streptomyces platensis]
          Length = 348

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR+ L    A     +   A+   AA+E +H +SL+HDD+  MD+   RRG+PTV 
Sbjct: 64  GGKMIRAALTILAAEACGGDAQQAVPGAAAVELVHNFSLLHDDV--MDHDLERRGRPTVW 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-- 166
            ++    AI+AG+ LL  A  +              Q   +      +  +  GQM D  
Sbjct: 122 SKFGTPAAILAGDILLARACGMFDEASGH-------QGWATKALIDAIAELAAGQMADLA 174

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +   +   +   + + KT AL+  AC  GA +  A      R   FG +LG+ FQL D
Sbjct: 175 LERRATVTLEEALTVSEQKTAALLRCACTLGAGLVGAPDATSRRFGAFGMHLGMAFQLVD 234

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 235 DVLGIWGD 242


>gi|295688727|ref|YP_003592420.1| trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756]
 gi|295430630|gb|ADG09802.1| Trans-hexaprenyltranstransferase [Caulobacter segnis ATCC 21756]
          Length = 341

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 22/220 (10%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-----NVNHLTALRVGAAI 79
           +Q+   +     + L++A      GGK++R  L    A L        ++   L++ AA+
Sbjct: 37  MQSDVPIIPALAEHLIAA------GGKRLRPLLTVAAARLAASDGAGSDNDHCLKLAAAV 90

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D   +RRGK   H+ +    +++ G+ L   AFE++    +   
Sbjct: 91  EFIHTATLLHDDV--VDGSALRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETNS--- 145

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             +++  +L+    +  +G +  Q++   D  + +     I + KT  L   A E+GA+ 
Sbjct: 146 --MKALEILARASRVIAEGEVM-QLMRSHDLNLSQALYLEIIQAKTAELFAAASEAGAVS 202

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           A   Q   + L+ +G NLG+ FQL DD LD     E L K
Sbjct: 203 AGVDQTRADALKAYGLNLGLAFQLVDDALDYGGATETLGK 242


>gi|72536066|gb|AAZ73133.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
           DC404]
          Length = 301

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 12/227 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN 66
           +L E    +   LD+LL            DR+ SA+R   L  GK+IR  L+   A    
Sbjct: 14  ELHELHAALQRRLDELLPVGDER------DRVSSAMREGVLAPGKRIRPLLLILAARDLG 67

Query: 67  VNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +      L +  A+E +H  SLI DD+P MDN  +RRG+PT+H QY E  AI+A   LL
Sbjct: 68  CDRDHPGLLDMACAVEMVHASSLILDDIPCMDNAALRRGRPTIHRQYGEDVAILAAVALL 127

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           + AF ++ + +  L    RSQ +  L+  +G QG++ GQ  D+++        ++    +
Sbjct: 128 SSAFGVMVAAQ-GLSPECRSQAVAELSMAVGTQGLVQGQYKDLREGTAPRSAEEIATTNE 186

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +KT  L     +  A+ A AS   ++++RCF ++LG  FQL DDL D
Sbjct: 187 LKTSVLFGATLQIAALAAGASPAARQKMRCFAQDLGQAFQLLDDLAD 233


>gi|302864915|ref|YP_003833552.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302567774|gb|ADL43976.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 346

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 18/225 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           R++  +  +L +  ++++      +  +  A R+ +  GGK+ R  LV   A   + +  
Sbjct: 27  RVEASVLGVLDRVETNLRASVASADPLVTEASRHLVEAGGKRFRPLLVALGAQFGDPDTD 86

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +     +E  H  +L HDD+  MD   +RRG P+ + ++    AI+ G+ L   A +I
Sbjct: 87  QVVPAAVVMELTHLATLYHDDV--MDEAAVRRGAPSANSRWTNSVAILVGDYLFARAADI 144

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGAL 188
            +    +                     ++ GQ+ +       +       +   KTG+L
Sbjct: 145 AADLGPEAV----------RLQARTFARLVHGQIAETVGPRDTDPVAHYLHVIAEKTGSL 194

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +   G +   A+    E L  +GE +G+ FQL+DDLLD   +
Sbjct: 195 IATSARFGGMFGGAAPEHVEALAEYGEIIGVAFQLSDDLLDIASE 239


>gi|329960631|ref|ZP_08298974.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
 gi|328532504|gb|EGF59298.1| polyprenyl synthetase [Bacteroides fluxus YIT 12057]
          Length = 324

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+       L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPMLVLLAAKLYGEVCPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A+++G+ LL  +   +   +     +I S L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLSGDYLLATSLVQVGLTRNHAIIDIVSCLGQDLAEGELL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT  L     ++GA+   A   + E  R FGE +G+ FQ+ DD+ D
Sbjct: 157 LQFSEDVYFDVIRKKTAVLFAACTKAGALSVGADDEKVEFARLFGEYIGLCFQIKDDIFD 216

Query: 230 CEE--DLPK 236
             E  ++ K
Sbjct: 217 YFESKEIGK 225


>gi|311265745|ref|XP_003130801.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like isoform 2
           [Sus scrofa]
          Length = 421

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 126 ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVH 185

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 186 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 243

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 244 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEI 297

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 298 AYQYGKNVGIAFQLIDDVLDFTS 320


>gi|134103316|ref|YP_001108977.1| polyprenyl diphosphate synthase component [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291004465|ref|ZP_06562438.1| polyprenyl diphosphate synthase component [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915939|emb|CAM06052.1| polyprenyl diphosphate synthase component [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 344

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 99/234 (42%), Gaps = 22/234 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   +++    ++ +L + + ++     T+ +  L+ A      GGK+ R       
Sbjct: 26  DSALAESVRQGIADVEALLHESV-RSDLEFATRTSLHLVDA------GGKRFRPLFALLA 78

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      ++  A +E +H  +L HDD+  MD   +RRG  + + ++D   AI+ G+
Sbjct: 79  AQFGDPRTENVIKSAAVVEMVHLATLYHDDV--MDEATMRRGATSANARWDNSVAILTGD 136

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVF 178
            L   A  +++   T     +              + ++ GQM +      DE       
Sbjct: 137 FLFAQASRLVADLGTDAAREM----------ARTFEALVTGQMRETVGVGRDEDPVDFYL 186

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   KTG+L+  A   GA+ + AS  +   +   G  LG  FQ++DD++D   
Sbjct: 187 KVIYEKTGSLIAIAGRFGALFSGASPEQVTAMERLGRILGTAFQISDDVIDIAS 240


>gi|114798232|ref|YP_759407.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114738406|gb|ABI76531.1| polyprenyl synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 337

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 13/231 (5%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLL---SAIRYAL-LGGKKIRSFLVTEC 61
            ++L   ++R+  ++ D L      + T+    +        Y +  GGK++R  +    
Sbjct: 10  KAQLSSITERMQALVADDLAAVERLLATRAASPVAVIPDLSGYIVSAGGKRLRPMITLIA 69

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A      +     + AA+E IH  +L+HDD+  +D   +RRGKP     +    AI+ G+
Sbjct: 70  AHAVGKANAATHALAAAVEFIHTATLLHDDV--VDESDLRRGKPAAKAIWGNKAAILVGD 127

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   AF ++    +     +     L+    +  +G +  Q+  +    +   +   I 
Sbjct: 128 FLFARAFNLLVEANS-----LDILNRLATASTVIAEGEVR-QLAAMATRDLPTEEYLAIV 181

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KTGAL   A E+GA+ A   +   + L  +G+NLG+ FQ+ DD LD   
Sbjct: 182 EAKTGALFEAAAETGAMSAGG-EEYSDALATYGKNLGLAFQIIDDALDYGG 231


>gi|269217208|ref|ZP_06161062.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
           700122]
 gi|269129345|gb|EEZ60430.1| short chain isoprenyl diphosphate synthase [Slackia exigua ATCC
           700122]
          Length = 353

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 15/238 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
                 L   ++ +  +++D +    S      +D L + +  Y+  GGK+ R  +    
Sbjct: 20  ETFEEYLSSYAQVVGDLVNDFIP---SGSHDGMDDYLYAPLLGYSRNGGKRHRPLICLAA 76

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +   A+   AAIE  H  +LIHDD+   D   +RRG+P +H+      AI  G+
Sbjct: 77  CVAVGGDVRRAVSSAAAIEHFHTAALIHDDIA--DEATLRRGEPCLHLTQGLGLAINMGD 134

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFID--ETQ 176
             L+     +      L+D ++ +++  L      +  + GQ LD    +DE  D     
Sbjct: 135 LGLSLVNGTVVR-DPLLEDGVKVRVIAELIE--MTRRTIEGQALDLGWARDERYDITPED 191

Query: 177 VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             ++   KT           GAI+   S+ E E LR +G + G+ FQ+ DDLL+ E D
Sbjct: 192 YLVMATHKTAHYSGAVPLAVGAIVGGGSEAEIEGLRAYGLDTGLAFQIQDDLLNIEGD 249


>gi|309812382|ref|ZP_07706137.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
 gi|308433687|gb|EFP57564.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
          Length = 342

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 16/234 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L  +L +  +R++  LD +++   S +  + +  L+ A      GGK+ R  L    
Sbjct: 23  SAELSDRLVDGLERVNARLD-VVVDHDSPLVREASHHLVDA------GGKRFRPMLTLLT 75

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + L        +   A +E  H  SL HDD+  MD   IRRG P+ +  Y   TAI+ G+
Sbjct: 76  SMLGTGISDEVVDAAAGVELTHLASLYHDDV--MDEADIRRGVPSANAVYGNSTAILIGD 133

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   A E+I+     L          +       Q     Q  D  D          + 
Sbjct: 134 LLFGKASELIA----HLGPEAVILQARTFVRLCAGQIEDERQTPDGADP---MEYYLKVL 186

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             KTG L+  A + GA+ +   +   E L  +GE +G++FQL+DD+LD   +  
Sbjct: 187 ADKTGVLIAAAAQYGAMFSGCDERTVEVLGRYGELVGLVFQLSDDILDIASEAE 240


>gi|251781555|ref|YP_002995856.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390183|dbj|BAH80642.1| hypothetical protein SDEG_0124 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126348|gb|ADX23645.1| polyprenyl synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 326

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 10/230 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF- 65
           S     + R+   ++ +       +  ++     + +  +  GGK +R       +    
Sbjct: 2   SSFWSKNPRMQAKINQICALIDKRVAVRNPAIETAVVDLSTAGGKYLRPAFFYLFSEFGQ 61

Query: 66  --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +V+    L++  ++E +H  +LIHDD+  +D+  +RRG+ T+  Q+ +  A+  G+ L
Sbjct: 62  EESVDEDKLLKIATSLEILHMATLIHDDI--IDDSPLRRGQETIQSQFGKDVAVYTGDLL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T  FE+I         N     + + T    L G L    L    E             
Sbjct: 120 FTVFFELILESMA----NTPYMTINAKTMKKILMGELNQMHLQFNQEQ-TIRSYLHSISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT  L   A + GA    A           G N+G+ FQ+ DD+LD   D
Sbjct: 175 KTAELFRLASKEGAYFGGADGKIVALAGRIGFNIGMAFQILDDILDYTAD 224


>gi|149634722|ref|XP_001506831.1| PREDICTED: similar to PDSS1 protein [Ornithorhynchus anatinus]
          Length = 398

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   NV+H  +         +    E IH  SL+H
Sbjct: 103 ELKEMCEYYFDGKGKAFRPIIVVLMARACNVHHDNSRDVQASQRTIALIAEMIHTASLVH 162

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 163 DDV--IDDASSRRGKHTVNQIWGEKKAVLAGDFILSAASVALARIGNTTIVSVLTQVLED 220

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +I+        E 
Sbjct: 221 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPVVHEI 274

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 275 AYQYGKNVGIAFQLIDDVLDFTA 297


>gi|15790228|ref|NP_280052.1| IdsA [Halobacterium sp. NRC-1]
 gi|169235957|ref|YP_001689157.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
           dimethylallyltransferase / geranyltranstransferase /
           farnesytranstransferase) [Halobacterium salinarum R1]
 gi|10580688|gb|AAG19532.1| geranylgeranyl diphosphate synthase [Halobacterium sp. NRC-1]
 gi|167727023|emb|CAP13809.1| putative trifunctional short-chain (E)-prenyl diphosphate synthase
           (probable dimethylallyltransferase / probable
           geranyltranstransferase / probable
           farnesytranstransferase) [Halobacterium salinarum R1]
          Length = 347

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 35/255 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            + + ++E  ++++  +DD        +     +RL  A RY L  GGK++R  ++   A
Sbjct: 9   AVLAAVRERRQQVNDAIDD-------DLPVAEPERLYEASRYILEAGGKRLRPAVLLLTA 61

Query: 63  SLFN---------------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
                                H+  +    +IE I  ++LIH     MD+  +RRG P V
Sbjct: 62  EALADTSDTPPYREFPDCIGGHVDVMSAAVSIEVIQSFTLIH--DDIMDDDDLRRGSPAV 119

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H +YD  TAI+AG+ L + AFEI+       +  +R+   L+ T       +  GQ +DI
Sbjct: 120 HREYDTETAILAGDTLYSKAFEIMLETGAPPERGLRAMRTLAET----CTHICEGQAMDI 175

Query: 168 QDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             E   +    +   + ++KT  L   A     ++  A +   E L  +G  +G  FQ+ 
Sbjct: 176 DFETRGDVVTDEYLEMVELKTAVLYAAAATLPGLLLSADEETVEALYNYGLRVGQAFQIQ 235

Query: 225 DDLLDCE---EDLPK 236
           DD+LD      +L K
Sbjct: 236 DDVLDLTVPSAELGK 250


>gi|294630816|ref|ZP_06709376.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14]
 gi|292834149|gb|EFF92498.1| trans-hexaprenyltranstransferase [Streptomyces sp. e14]
          Length = 336

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  + + +Q     ++  L +   ++     T+    L+ A      GGK+ R  LV   
Sbjct: 13  DQAVEADVQAGLAAVEEGLLEA-TKSEVPFITEAAQHLVKA------GGKRFRPLLVMLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G+
Sbjct: 66  AQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVASANTRWGNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A +I++    +                +  + ++ GQ+L+    QD         
Sbjct: 124 FLFARASQILADLGPEAV----------RVQALAFERLVTGQILETAGPQDGRDPVDHYL 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 174 DVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|72536059|gb|AAZ73127.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
           DC260]
          Length = 301

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 14/216 (6%)

Query: 34  QHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCYSLIHD 90
           Q +DR+ +A+R   L  GK+IR  L+   A            L +  A+E +H  SLI D
Sbjct: 34  QQSDRVRAAMRAGTLAQGKRIRPLLLLLAARDMGCELTQNGVLDLACAVEMVHAASLILD 93

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+PSMDN  +RRG+PTVH ++ E  AI+A   LL+ AFE+I+     L    +S+ +  L
Sbjct: 94  DIPSMDNAQMRRGRPTVHREFGENVAILAAIALLSRAFEVIAIA-PGLPAIHKSEAIAEL 152

Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           +  +GLQG++ GQ  D+ D  +      + M  ++KT  L     +  AI A AS   ++
Sbjct: 153 SAAVGLQGLVQGQFQDLHDGTQSRSPEAIAMTNELKTSVLFRATLQMAAIAADASPQVRQ 212

Query: 209 RLRCFGENLGIIFQLADDL--------LDCEEDLPK 236
           RL  F ++LG  FQL DDL         D  +D  K
Sbjct: 213 RLSFFAQDLGQAFQLLDDLADGCKHTGKDVHQDQGK 248


>gi|238026152|ref|YP_002910383.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1]
 gi|237875346|gb|ACR27679.1| Octaprenyl-diphosphate synthase [Burkholderia glumae BGR1]
          Length = 332

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + + ++ ++I+ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 14  AQLLAPIADDMEQINRVIRQSLSSDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 67  GALGDGSSHRHTLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE++   + +
Sbjct: 125 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDESRYMQVIR 178

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   +   GA++A A  + +     +G  +G  FQ+ DD LD   
Sbjct: 179 YKTAKLFEASARLGAVLAGADASTEAAAAEYGRRIGTAFQIMDDWLDYAG 228


>gi|332879986|ref|ZP_08447670.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681982|gb|EGJ54895.1| polyprenyl synthetase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 326

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 16/220 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +            LL+ I Y +    GK++R   +   A +           R  + I
Sbjct: 17  LFEQKFRGAMSSKVALLNRITYYIVNRKGKQMRPMFIFLVAKMLSGGKVTERTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDV--VDDSNKRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSIDNGDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA-- 197
           D +R   ++S+      +G L  QM   +   I E   + + + KT  L+   C  GA  
Sbjct: 133 DLLR---IISVAVREMSEGELL-QMEKARRLDIVEEVYYEVIRQKTATLIAACCAMGACS 188

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
           +M +A     E++R FGE +G+ FQ+ DDL D  ED + K
Sbjct: 189 VMPNA-PELIEKMRLFGEYIGMAFQIKDDLFDYTEDAIGK 227


>gi|257871156|ref|ZP_05650809.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2]
 gi|257805320|gb|EEV34142.1| trans-hexaprenyltranstransferase [Enterococcus gallinarum EG2]
          Length = 328

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVGAAIECI 82
           L++ +  ++ +  ++ + A+ ++  GGK +R       +      +   A+ + AAIE +
Sbjct: 23  LMEQSLKLKNKAVEQAILAMIHS--GGKMLRPAYQLLFSEFGEEKDSQKAVALSAAIEML 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SLIHDD+  +D    RR  PT+  Q+    A+ AG+ L    F++++     LK   
Sbjct: 81  HTASLIHDDI--VDQADTRRSLPTIRAQFGNDVAVYAGDYLFVCCFKLLADYAGSLK--- 135

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM    D  +           KT  L   +C  GA  + A
Sbjct: 136 -SLQINSRSMETILAGEL-GQMSKRYDLNVTIEDYLENISGKTAELFALSCFIGAYESGA 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           S     + +  G+++G+ FQ+ DD+LD  +
Sbjct: 194 SLRLANQAKTIGQSIGLAFQIMDDILDYSQ 223


>gi|315501200|ref|YP_004080087.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315407819|gb|ADU05936.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 346

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 18/225 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
           R++  +  +L +  + ++      +  +  A R+ +  GGK+ R  LV   A   + +  
Sbjct: 27  RVEASVLGVLDRVETSLRASVASADPLVTEASRHLVEAGGKRFRPLLVALGAQFGDPDTD 86

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             +     +E  H  +L HDD+  MD   +RRG P+ + ++    AI+ G+ L   A +I
Sbjct: 87  QVVPAAVVMELTHLATLYHDDV--MDEAAVRRGAPSANSRWTNSVAILVGDYLFARAADI 144

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGAL 188
            +    +                     ++ GQ+ +       +       +   KTG+L
Sbjct: 145 AADLGPEAV----------RLQARTFARLVHGQIAETVGPRDTDPVAHYLHVIAEKTGSL 194

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +   G +   A+    E L  +GE +G+ FQL+DDLLD   +
Sbjct: 195 IATSARFGGMFGGAAPEHVEALAEYGEIIGVAFQLSDDLLDIASE 239


>gi|163735452|ref|ZP_02142885.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och
           149]
 gi|161391265|gb|EDQ15601.1| geranylgeranyl pyrophosphate synthetase [Roseobacter litoralis Och
           149]
          Length = 294

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/219 (33%), Positives = 110/219 (50%), Gaps = 13/219 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA- 72
           RI+  +   +       +     RL SA+ YA   GG +IR  ++T  A     +     
Sbjct: 6   RIEAAIAQAVA--VGQGRGAVPVRLSSALGYATAPGGARIRPTILTSVAMACGDDQPKLT 63

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E IHC SL+HDDLP  D+  +RRGKP+VH  Y E  A++AG+ L+  AFEI++
Sbjct: 64  DAAAAALELIHCASLVHDDLPCFDDADMRRGKPSVHKAYSEPLAVLAGDSLIVLAFEILA 123

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
             ++ L  +  +Q++L L+   G+  G+  GQ  + + E      +    + KTGAL   
Sbjct: 124 R-ESGLAPDRVAQMILILSQRTGMPGGICAGQGWESEAEI----DLSAYHQAKTGALFIA 178

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A + GA+ A       E     G  +G  FQ+ADDL D 
Sbjct: 179 ATQMGAVAAGQD---AEPWFELGARIGEAFQVADDLRDA 214


>gi|322387923|ref|ZP_08061530.1| geranyltranstransferase [Streptococcus infantis ATCC 700779]
 gi|321141196|gb|EFX36694.1| geranyltranstransferase [Streptococcus infantis ATCC 700779]
          Length = 291

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 127/234 (54%), Gaps = 15/234 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           QE    +++ L++       +   Q    L  A+ Y++  GGK+IR +L+ E      V 
Sbjct: 4   QEKLALVESALEEF------YGDQQLAANLREAVLYSIHAGGKRIRPYLLLEVLESLQVP 57

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              A   V AA+E IH  SLIHDDLP+MD+   RRG  T H ++ E  AI+AG+ L    
Sbjct: 58  ITIAHAQVAAALEMIHTGSLIHDDLPAMDDDDFRRGSLTNHKKFGEALAILAGDALFLDP 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKT 185
           + +I+     L + I+  L+ SL+ + G  GM+ GQ+LD++ E   ++  ++  I   KT
Sbjct: 118 YALIAQAN--LPNEIKVDLIASLSLSSGSMGMVAGQVLDMEGEGKHLNLEELQTIHANKT 175

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+ F  ++  ++A   +N + +L+  GE +G+ FQ+ DD+LD     E++ K
Sbjct: 176 GKLLAFPFQAAGVIAELDENLQIQLKTVGELIGLAFQVRDDILDVTASFEEIGK 229


>gi|161525972|ref|YP_001580984.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349309|ref|YP_001944937.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC
           17616]
 gi|221213256|ref|ZP_03586231.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD1]
 gi|160343401|gb|ABX16487.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333331|dbj|BAG42401.1| heptaprenyl diphosphate synthase [Burkholderia multivorans ATCC
           17616]
 gi|221166708|gb|EED99179.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD1]
          Length = 331

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A 
Sbjct: 14  HLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVAG 66

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L
Sbjct: 67  ALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDYL 124

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + + 
Sbjct: 125 YSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIRY 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 179 KTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|224044763|ref|XP_002189942.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1
           [Taeniopygia guttata]
          Length = 677

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 25/231 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
           ++     + I  +LL+  A          L     Y   G GK  R  +V   A   N++
Sbjct: 363 KDLKNLYEDIKKELLVSAA---------ELKEMCDYYFDGKGKAFRPMIVVLMARACNIH 413

Query: 69  HLTA-------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           H  +         V    E IH  SL+HDD+  +D+   RRGK T++  + E  A++AG+
Sbjct: 414 HNNSKEVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRRGKRTLNQIWGERKAVLAGD 471

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            +L+ A   ++        ++ +Q++  L     L      Q+   ++E           
Sbjct: 472 FILSAASVALARIGNTTIVSVLTQVIEDLVRGEFL------QLGSKENENERFAHYLEKT 525

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT +L+  +C++ +I+        E    +G+N+GI FQL DD+LD   
Sbjct: 526 FKKTASLIANSCKAVSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTS 576


>gi|327400034|ref|YP_004340873.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6]
 gi|327315542|gb|AEA46158.1| Farnesyltranstransferase [Archaeoglobus veneficus SNP6]
          Length = 303

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 22/225 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            E  + ++  LD+L+ +  +        ++  A+R+ +  GGK+ R  +V     L    
Sbjct: 5   WEEYRVVNEALDNLVNEVDAI------PKVKKALRHIIKAGGKRTRPIIVLLSGRLCGGE 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + V  A+E IH  SL HDD+  +D G +RR   T+H++YD   AI+ G+ L++ + 
Sbjct: 59  WSEVMNVALAVELIHTASLAHDDV--IDRGVVRRNVETLHVKYDTSLAILVGDWLISKSV 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKT 185
           E++S         + ++ ++     +G+  M  G+++D   I++    E   F     KT
Sbjct: 117 ELVS---------VYNEEVIRDFARVGMM-MAEGEIMDIDSIKNGGFGEEDYFKCIAAKT 166

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +L  ++ ++   +    +   E L  +G NLGI +QL DDLL+ 
Sbjct: 167 ASLFAYSAKNACRIVSDDKKAAEYLFNYGNNLGIAYQLVDDLLEY 211


>gi|268316794|ref|YP_003290513.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
 gi|262334328|gb|ACY48125.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
          Length = 330

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 15/233 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHM--QTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           QE + ++   L  L+ Q    +   T+    L   +RY L G GK++R  L+   A L+ 
Sbjct: 6   QEAAAQV-ARLRRLVEQALPGLVEATREPAELYEPVRYVLSGTGKRMRPVLLMLAAELYG 64

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
               + L    A+E  H ++L+HDD+  MD+   RRG+PTVH+Q+DE TA++ G+ L+  
Sbjct: 65  RPAESVLPAALAVEVFHAFTLVHDDI--MDHAAERRGRPTVHVQWDEATALLCGDYLMGL 122

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKM 183
           ++ ++   +      + +           ++ +  GQ LD   E    +   +   +   
Sbjct: 123 SYALLGQVENAPLARVLAMFHR------MVERLCEGQALDKAFETRAHVSVAEYLQMVDG 176

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KT AL+    + G ++  A + + + L   G NLG  FQ+ DDLLD     P+
Sbjct: 177 KTSALLELCLQLGGLLGGAGEADLQALEQLGRNLGRAFQIQDDLLDLTATSPQ 229


>gi|238018911|ref|ZP_04599337.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748]
 gi|237864395|gb|EEP65685.1| hypothetical protein VEIDISOL_00771 [Veillonella dispar ATCC 17748]
          Length = 323

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 18/225 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E  +RI   L+ +    AS   T   D   L+  +  +  GGK++R+ L    A+     
Sbjct: 8   EIMERIALDLEGVEESLASSFNTGAEDFNALIRPL--SAAGGKRLRAQLCLLIANAGTSV 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +R+  A+E +H  +LIHDD+  +D   IRRG+ T+H+      AI++G+ L   AF
Sbjct: 66  ERQRIRIAEAVEMLHLATLIHDDV--LDQAEIRRGEETIHMHKGNKVAILSGDYLFAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKT 185
           +I+S        N++   + S      +  ++ G+ + ++D +       +     + KT
Sbjct: 124 QIVSEM-----PNMKYLQIFSH----IITCLVEGEFMQMEDVYRIDQGIDRYMTKTQKKT 174

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              M    E G ++   S++E   L+ +G  LG+ FQ+ DD++D 
Sbjct: 175 ADFMEGCMELGGLLGGWSESEIVELKKYGHALGMAFQITDDIMDY 219


>gi|163760025|ref|ZP_02167109.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
 gi|162282983|gb|EDQ33270.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
          Length = 305

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 102/207 (49%), Positives = 138/207 (66%), Gaps = 3/207 (1%)

Query: 32  QTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +      L+ A+R+  L GGK++R FLV E A +       ALRV AA+ECIHCYSL+HD
Sbjct: 36  EIARPAHLILAMRHGVLNGGKRLRPFLVIETARMLGAPEDAALRVAAALECIHCYSLVHD 95

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP+MD+  +RRG+PTVHI +DE TAI+AG+ LLT AF++IS+P+T L  + R +L+ +L
Sbjct: 96  DLPAMDDDDLRRGQPTVHIAFDEATAILAGDALLTLAFDVISAPETDLPADARLRLVNAL 155

Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           +   G+ GM+GGQ LD+  E +  DE  +  +Q MKTGAL+ FAC +GAI A        
Sbjct: 156 SRAAGVGGMVGGQALDLAAERVSPDEAGIVKLQAMKTGALLRFACAAGAIAAGCDDAIVA 215

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
           R+  FGE +G+ FQLADDLLD   D  
Sbjct: 216 RVTRFGEIIGLAFQLADDLLDVTSDAA 242


>gi|221202398|ref|ZP_03575430.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD2M]
 gi|221208142|ref|ZP_03581147.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD2]
 gi|221172045|gb|EEE04487.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD2]
 gi|221177675|gb|EEE10090.1| octaprenyl-diphosphate synthase (Octaprenyl
           pyrophosphatesynthetase) (OPP synthetase) [Burkholderia
           multivorans CGD2M]
          Length = 331

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A 
Sbjct: 14  HLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVAG 66

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ L
Sbjct: 67  ALGETSHQRHVLAAVVEFIHTATLLHDDV--VDESELRRGRETANALFGNAASVLVGDYL 124

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + +FE++          +R   +LS    I  +G +  Q+L++ D  +DET+   + + 
Sbjct: 125 YSRSFEMMVGVG-----KMRVMDILSEATTIISEGEVL-QLLNMHDADVDETRYMQVIRY 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   +   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 179 KTAKLFEASARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 227


>gi|209965378|ref|YP_002298293.1| geranyltranstransferase [Rhodospirillum centenum SW]
 gi|209958844|gb|ACI99480.1| geranyltranstransferase [Rhodospirillum centenum SW]
          Length = 289

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/225 (31%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +   RI+  L+  +  T     +    RL  A+RY++  GG ++R  L    A     + 
Sbjct: 2   DVMARIELALESAIKGTEV---SGTPPRLAEAMRYSVFPGGHRLRPRLCVAVARACGDDA 58

Query: 70  LTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                  AA IE +HC SL+HDDLP  D+  IRR KP+VH  + E  A++AG+GL+  AF
Sbjct: 59  PELTDAAAASIELLHCASLVHDDLPCFDDASIRRSKPSVHKAFGEPLAVLAGDGLIVLAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           ++++    Q  D +   + +         G++ GQ  + +     E  +    + KTGAL
Sbjct: 119 DLLARAAAQRPDRLIPLMGVVSRSVGVPSGIIAGQAWECE----PEADLSEYHRAKTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              A  +GA  A A        R  GE LG  +Q+ADDL D   D
Sbjct: 175 FAGATMAGAAAAGADPT---PWRFLGERLGEAYQVADDLRDVAAD 216


>gi|295135349|ref|YP_003586025.1| polyprenyl synthetase [Zunongwangia profunda SM-A87]
 gi|294983364|gb|ADF53829.1| polyprenyl synthetase [Zunongwangia profunda SM-A87]
          Length = 311

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 11/190 (5%)

Query: 50  GKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK++R   V   A +      +    R  + IE IH  +L+HDD+  +D+   RRG  ++
Sbjct: 31  GKQMRPMFVFLVAKMVSDGKVNERTYRGASVIELIHTATLVHDDV--VDDSNRRRGFFSI 88

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    A++ G+ LL+    ++ S      D ++   ++S+      +G L  Q+   
Sbjct: 89  NALWKNKIAVLVGDYLLSKG--LLLSIDNNDFDLLK---IISVAVREMSEGELL-QIEKA 142

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +   I E   + I + KT  L+   C  GA        + E +R FGE +G+ FQ+ DDL
Sbjct: 143 RRLDITEEVYYDIIRQKTATLIAACCSLGAASVKPDSGDVENMRRFGELIGMAFQIKDDL 202

Query: 228 LDC-EEDLPK 236
            D  EE + K
Sbjct: 203 FDYGEEKIGK 212


>gi|256960580|ref|ZP_05564751.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96]
 gi|293384419|ref|ZP_06630300.1| polyprenyl synthetase [Enterococcus faecalis R712]
 gi|312906571|ref|ZP_07765571.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
 gi|256951076|gb|EEU67708.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Merz96]
 gi|291078267|gb|EFE15631.1| polyprenyl synthetase [Enterococcus faecalis R712]
 gi|310627219|gb|EFQ10502.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
          Length = 328

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
           L++ A  +  Q     +  + ++  GGK +R       +      +   A  + A+IE +
Sbjct: 23  LMEQAVQIDNQEIQAAVHDMIHS--GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELL 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK   
Sbjct: 81  HTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK--- 135

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM +  +  +   Q       KT  L   +C  GA  +  
Sbjct: 136 -SIQLNSRSMEKVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGT 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           SQ   +R    GEN+G+ FQ+ DD+LD  +
Sbjct: 194 SQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223


>gi|239980128|ref|ZP_04702652.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291451984|ref|ZP_06591374.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291354933|gb|EFE81835.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 336

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L +   ++     T     LL A      GGK++R  LV   
Sbjct: 13  DQALEADVQAGMAAVEAGLLEA-TKSEVSFITDAAQHLLKA------GGKRLRPLLVMLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   + +    +  G  +E  H  +L HDD+  MD   +RRG P+ + ++D   A++ G+
Sbjct: 66  AQFGDPDAPGIVPSGVVVELTHLATLYHDDV--MDEAEVRRGVPSANARWDNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A  I++    +                   + ++ GQ+++    +D         
Sbjct: 124 FLFARASHILADLGPEAV----------RVQAEAFERLVTGQIMETAGPRDGRDPVDHYL 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  A   GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 174 DVLGGKTGSLIAVAGRFGAMMSGADERVVDILTQYGERLGVAFQLADDVLDIASD 228


>gi|225870049|ref|YP_002745996.1| geranyltranstransferase [Streptococcus equi subsp. equi 4047]
 gi|225699453|emb|CAW92957.1| putative geranyltranstransferase [Streptococcus equi subsp. equi
           4047]
          Length = 289

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 7/172 (4%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                V AA+E IH  SLIHDDLP+MDN   RRG+ T H Q++E TAI+AG+ L    F 
Sbjct: 58  DAHYAVAAAVEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFNEATAILAGDSLFLDPFA 117

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +I+     L  ++  QL+   +   G  GM+GGQ+LD++ E   +D  ++  I   KTG 
Sbjct: 118 LIA--GADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEHQLLDIQELSDIHANKTGK 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           L+     +  I+A  S +    L   G  +G  FQ+ DD+LD      DL K
Sbjct: 176 LLTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDLTASFADLGK 227


>gi|229547329|ref|ZP_04436054.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX1322]
 gi|255970563|ref|ZP_05421149.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1]
 gi|256958518|ref|ZP_05562689.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5]
 gi|256963076|ref|ZP_05567247.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704]
 gi|257088406|ref|ZP_05582767.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6]
 gi|257420312|ref|ZP_05597302.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98]
 gi|294780744|ref|ZP_06746104.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
 gi|312953761|ref|ZP_07772592.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
 gi|229307568|gb|EEN73555.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX1322]
 gi|255961581|gb|EET94057.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T1]
 gi|256949014|gb|EEU65646.1| trans-hexaprenyltranstransferase [Enterococcus faecalis DS5]
 gi|256953572|gb|EEU70204.1| trans-hexaprenyltranstransferase [Enterococcus faecalis HIP11704]
 gi|256996436|gb|EEU83738.1| trans-hexaprenyltranstransferase [Enterococcus faecalis D6]
 gi|257162136|gb|EEU92096.1| trans-hexaprenyltranstransferase [Enterococcus faecalis X98]
 gi|294452184|gb|EFG20626.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
 gi|310628321|gb|EFQ11604.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
 gi|315033018|gb|EFT44950.1| polyprenyl synthetase [Enterococcus faecalis TX0017]
 gi|315035236|gb|EFT47168.1| polyprenyl synthetase [Enterococcus faecalis TX0027]
 gi|315152723|gb|EFT96739.1| polyprenyl synthetase [Enterococcus faecalis TX0031]
 gi|315171248|gb|EFU15265.1| polyprenyl synthetase [Enterococcus faecalis TX1342]
 gi|323479172|gb|ADX78611.1| polyprenyl synthetase family protein [Enterococcus faecalis 62]
 gi|327536366|gb|AEA95200.1| trans-hexaprenyltranstransferase [Enterococcus faecalis OG1RF]
          Length = 328

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
           L++ A  +  Q     +  + ++  GGK +R       +      +   A  + A+IE +
Sbjct: 23  LMEQAVQIDNQEIQAAVHDMIHS--GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELL 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK   
Sbjct: 81  HTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK--- 135

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM +  +  +   Q       KT  L   +C  GA  +  
Sbjct: 136 -SIQLNSRSMEKVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGT 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           SQ   +R    GEN+G+ FQ+ DD+LD  +
Sbjct: 194 SQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223


>gi|256831793|ref|YP_003160520.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
 gi|256685324|gb|ACV08217.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
          Length = 336

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + L E  + ++    + L    SH  T  N+   ++   A  GGK++R  L    
Sbjct: 12  DEKLATALTEELQHVE----EHLRSATSHADTVVNE---ASQHLANAGGKRLRPLLTLLA 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A +    +    +    +E  H  SL HDD+  MD+  +RRG P+ H  +    AI+ G+
Sbjct: 65  AHVGQGVNDDVRQAALVVELTHLASLYHDDV--MDSAPLRRGAPSAHEVWGNSVAILTGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVF 178
            L   A  ++++   +                +  + +  GQ+ +    +D         
Sbjct: 123 LLFARASRLVANLGPEAV----------HIQAVTFERLCLGQLHETMGVRDGDDPVEHYI 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KT +L+  +   GA  A A    ++ L  +GEN+G+ FQLADD++D   D
Sbjct: 173 GVLADKTASLLATSALLGAKFAGADHGIQQALARYGENVGVAFQLADDIIDLTSD 227


>gi|306820179|ref|ZP_07453823.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
 gi|304551780|gb|EFM39727.1| heptaprenyl diphosphate synthase component II [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
          Length = 317

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 14/194 (7%)

Query: 50  GKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK +R  L+  CA L +    N     ++ A +E  H  SLIHDD+  +DN   RRGK +
Sbjct: 33  GKMLRPKLLLLCAFLGSNWKNNREKICKLAAMVELTHLASLIHDDI--VDNSPYRRGKTS 90

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  +Y +  A+ AG+ L++  F   +           +  +LS T      G +  Q L+
Sbjct: 91  LQGKYGKDAAVFAGDFLISRIFHYGTEENLNE-----AVSVLSKTVEYMCIGEIE-QDLN 144

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              E I E + F I + KT AL   AC  GA  A  S+   ++L  F +NLG++FQL DD
Sbjct: 145 RYREDISEKKYFEIIENKTAALFQVACHIGAKEAGCSEENIKKLELFVKNLGLMFQLKDD 204

Query: 227 LLDCEE---DLPKK 237
           +LD      DL K+
Sbjct: 205 ILDFTSNSKDLGKE 218


>gi|227517154|ref|ZP_03947203.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX0104]
 gi|229547906|ref|ZP_04436631.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           ATCC 29200]
 gi|307288086|ref|ZP_07568100.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
 gi|227075377|gb|EEI13340.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX0104]
 gi|229306927|gb|EEN72923.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           ATCC 29200]
 gi|306500928|gb|EFM70244.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
          Length = 328

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
           L++ A  +  Q     +  + ++  GGK +R       +      +   A  + A+IE +
Sbjct: 23  LMEQAVQIDNQEIQAAVHDMIHS--GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELL 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK   
Sbjct: 81  HTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK--- 135

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM +  +  +   Q       KT  L   +C  GA  +  
Sbjct: 136 -SIQLNSRSMEKVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGT 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           SQ   +R    GEN+G+ FQ+ DD+LD  +
Sbjct: 194 SQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223


>gi|221633181|ref|YP_002522406.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156897|gb|ACM06024.1| isoprenyl synthetase [Thermomicrobium roseum DSM 5159]
          Length = 344

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 20/234 (8%)

Query: 16  IDTILDDLLLQTASHMQT-QHNDRLLSAIRYAL------------LGGKKIRSFLVTECA 62
           ++  + +LL +  +          +   + Y L            + GK+ R  L T  A
Sbjct: 8   VERTMQELLARYGARFPALPGALPVYEVLAYHLGWRDERMQPASGVSGKRFRPALCTAIA 67

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           S    +   A+ + AAIE +H ++LIHDD+   D   +RR +PT+   + +  AI AG+ 
Sbjct: 68  SAVCGDAARAVGIAAAIELLHNFTLIHDDIQ--DRSRLRRHRPTIWALWGDAQAINAGDA 125

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFM 179
           L   +          L+ +  ++L+        L  ++ GQ+LD+  E   E    +   
Sbjct: 126 LFVLSQIAALEAAQALEPSRGAELVRRFNETALL--IVEGQVLDLSFEQRPEVSVNEYLT 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT AL+ ++  +GA++A A      RL  FG  LG+ FQ+ DD L    D
Sbjct: 184 MIERKTAALIAYSAWAGALVAGAPAEVAARLERFGRALGLGFQIRDDYLGVWGD 237


>gi|308813211|ref|XP_003083912.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri]
 gi|116055794|emb|CAL57879.1| putative polyprenyl diphosphate synthase (ISS) [Ostreococcus tauri]
          Length = 374

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 14/230 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64
           + + +  ++  ++ + +     +  ++   L +A +    GGK++R  LV   A      
Sbjct: 53  ITQITAPVNADMEQMRMNLRDIIGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAIK 112

Query: 65  --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              +       R+    E IH  SL+HDD+  +D+   RRGK T+H  Y    AI+AG+ 
Sbjct: 113 MNMSDITDRQRRLAEITEMIHTASLVHDDV--LDDCDTRRGKETIHTLYGARVAILAGDF 170

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   +   +++        + SQ++               Q   + +  I   +      
Sbjct: 171 LFAQSSWFLANLDNLEVIKLISQVIADFADGEIS------QAGALFNCDITLDEYMEKSH 224

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  +C+S ++ +   ++ K  +  +G++LG+ FQ+ DD+LD  +
Sbjct: 225 NKTASLIAASCKSASVFSECEESVKIDMYEYGKHLGLAFQVVDDILDFTQ 274


>gi|225791079|gb|ACO31283.1| PtmT4 [Streptomyces platensis]
          Length = 348

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 85/188 (45%), Gaps = 12/188 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR+ L    A     +   A+   AA+E +H +SL+HDD+  MD    RRG+PTV 
Sbjct: 64  GGKMIRAALTILAAEACGGDARQAVPGAAAVELVHNFSLLHDDV--MDRDLERRGRPTVW 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-- 166
            ++    AI+AG+ LL  A  +              Q   +      +  +  GQM D  
Sbjct: 122 SKFGTPAAILAGDILLARACGMFDEASGH-------QGWATKALIDAIAELAAGQMADLA 174

Query: 167 -IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +   +   +   + + KT AL+  AC  GA +  A      R   FG +LG+ FQL D
Sbjct: 175 LERRATVTLEEALTVSEQKTAALLRCACTLGAGLVGAPDGTSRRFGAFGMHLGMAFQLVD 234

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 235 DVLGIWGD 242


>gi|328468126|gb|EGF39132.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes 1816]
          Length = 302

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 11/191 (5%)

Query: 48  LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK +R       A    + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT
Sbjct: 21  AGGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPT 78

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQML 165
           +H +Y    A+  G+ L    F+I+S+  + +      + +   + NI    M    QM 
Sbjct: 79  IHSKYGRNYAVYTGDYLFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMR 132

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                 +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ+ D
Sbjct: 133 TSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIID 192

Query: 226 DLLDCEE-DLP 235
           D+LD    D  
Sbjct: 193 DVLDYTSTDEG 203


>gi|254797046|ref|YP_003081883.1| putative geranyltranstransferase [Neorickettsia risticii str.
           Illinois]
 gi|254590280|gb|ACT69642.1| putative geranyltranstransferase [Neorickettsia risticii str.
           Illinois]
          Length = 256

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 88/232 (37%), Positives = 124/232 (53%), Gaps = 21/232 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS 63
           +  KLQ+ S+ I   L + L    S       D+L  AIRY+LL     IR FLV E  +
Sbjct: 3   VKKKLQKASRLIHETLKENLSLFPSE------DKLFQAIRYSLLAESSHIRGFLVLELGT 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           LFN+ ++  + V AAIE IH +SLIHDDLP++DN   RR +P  HI + E TAI+AG+ L
Sbjct: 57  LFNIPYVDTIEVAAAIEMIHSFSLIHDDLPALDNSNERRNQPACHIAFQESTAILAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L  A++I+S     L     S+ +L          M+ GQ+ D+            I KM
Sbjct: 117 LVLAYQILSHYGAPLVQRT-SKYVLE---------MITGQVHDVI--GSSTLTADEINKM 164

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           K+G+L   +C S   +A+++Q+E   L  FG  +GIIFQ  DD+ D   D  
Sbjct: 165 KSGSLFALSCSSVGHLANSAQSELTVLEAFGYEIGIIFQAVDDIKD--GDAK 214


>gi|171702409|dbj|BAG16276.1| geranylgeranyl diphosphate synthase [Nocardia brasiliensis]
          Length = 332

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 13/234 (5%)

Query: 6   PSKLQENSKRIDTI--LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
           P  +   ++  D    L   L  TA+       DRL +  RYA+   GK +R  L+ E A
Sbjct: 3   PGYIDSRTEEFDPAPALRHYLAGTAA----GDGDRLDAVTRYAVQPPGKLVRPVLLVESA 58

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +    +    + +  A+E +H  +L+HDD+  +D   +RRG+PTVH +Y    AI+AG+ 
Sbjct: 59  AAVGADPADLVPIAVALEYLHVATLVHDDI--IDGDLLRRGRPTVHARYGRDEAIVAGDA 116

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFM 179
           LL   F  ++               + +    GL  +  GQ ++     D +    +   
Sbjct: 117 LLLDTFRTLTEAAELGFPPAAVLEAVRIVAVAGLD-LCRGQAMEAGLAGDLYCGMARYRT 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  +KTGAL   AC +GA++   S  E   LR F ++LG  FQ+ DDLL    D
Sbjct: 176 MAGLKTGALFIAACAAGAVLGGGSGEEVRALRSFADHLGCAFQMRDDLLPYLAD 229


>gi|257078168|ref|ZP_05572529.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1]
 gi|256986198|gb|EEU73500.1| trans-hexaprenyltranstransferase [Enterococcus faecalis JH1]
          Length = 328

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
           L++ A  +  Q     +  + ++  GGK +R       +      +   A  + A+IE +
Sbjct: 23  LMEQAVQIDNQEIQAAVHDMIHS--GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELL 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK   
Sbjct: 81  HTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK--- 135

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM +  +  +   Q       KT  L   +C  GA  +  
Sbjct: 136 -SIQLNSRSMEKVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGT 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           SQ   +R    GEN+G+ FQ+ DD+LD  +
Sbjct: 194 SQRFAKRCGKIGENIGLAFQIIDDILDYTQ 223


>gi|302521213|ref|ZP_07273555.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
           SPB78]
 gi|302430108|gb|EFL01924.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
           SPB78]
          Length = 336

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L D        +         +A    L GGK+ R  LV   
Sbjct: 13  DQALEADVQAGLTAVEEGLLDATKSGVPFITE-------AAQHLVLAGGKRFRPLLVMLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +     +E  H  +L HDD+  MD   +RRG  + + ++D   A++ G+
Sbjct: 66  AQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDSANARWDNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L + A +I++    +                   + ++ GQ+L+    +D         
Sbjct: 124 FLFSRASQILAGLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVDHYL 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  A   GA+M+ A     E L  +GE LG+ FQLADD+LD   D
Sbjct: 174 DVLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERLGVAFQLADDVLDIASD 228


>gi|145219780|ref|YP_001130489.1| dimethylallyltranstransferase [Prosthecochloris vibrioformis DSM
           265]
 gi|145205944|gb|ABP36987.1| Dimethylallyltranstransferase [Chlorobium phaeovibrioides DSM 265]
          Length = 324

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 9/215 (4%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L  Q    +    N  +    RY L   GK+IR  +V   AS+      ++ R    +E 
Sbjct: 16  LFRQKYRELLRNQNSLVDKVTRYVLRQQGKQIRPVMVLLSASVAGGIRESSYRGAIMVEL 75

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  +LIHDD+  +D   +RRG  +++  +    +++ G+ LL+         K     +
Sbjct: 76  LHSATLIHDDV--VDGAEMRRGIASINAIWKNKISVLIGDYLLSKGLLYSLESKDYGFLH 133

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           I S  +  ++    L      Q+   +   I E     +   KT +L+  +C  GA  A 
Sbjct: 134 IVSDAVRRMSEGEIL------QIQKTRSLDISEEDYIRVISDKTASLIASSCAMGAESAT 187

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             + +   ++ +GE+LG+ FQ+ DD LD   D  K
Sbjct: 188 EDEVKIAAMKKYGESLGLAFQIRDDTLDYTGDSRK 222


>gi|307294472|ref|ZP_07574314.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
 gi|306878946|gb|EFN10164.1| Polyprenyl synthetase [Sphingobium chlorophenolicum L-1]
          Length = 346

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA L         ++ AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 65  GGKRMRPMLTLACADLVGYAGSRHYKLAAAVEFIHTATLLHDDV--VDGSGLRRGRKTAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L + +FE++   ++     ++   +LS    +  +G +  Q+   +
Sbjct: 123 IIWGNSASVLVGDFLFSRSFELMVEAES-----LKVLKILSNASAVIAEGEVN-QLTAQR 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E Q   I   KT AL   AC   A++A   + E++ L  +G NLGI FQL DD +
Sbjct: 177 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRDEAEEQALDVYGRNLGIAFQLIDDAI 236

Query: 229 DCEED 233
           D E D
Sbjct: 237 DYESD 241


>gi|254451013|ref|ZP_05064450.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238]
 gi|198265419|gb|EDY89689.1| farnesyl diphosphate synthase [Octadecabacter antarcticus 238]
          Length = 301

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 79/202 (39%), Positives = 112/202 (55%), Gaps = 9/202 (4%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
            +  A+ YA+ GGK +R FLV E A L  V    A  +  AIE +H YSLIHDDLP MD+
Sbjct: 42  PIPEAMMYAVRGGKSLRGFLVLEGARLHGVQERIAAPIAGAIEAMHAYSLIHDDLPCMDD 101

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRGKPTVH ++DE TA++ G+ L   AFE+I       +  +    ML    + G +
Sbjct: 102 DDLRRGKPTVHRKWDEATAVLTGDALQALAFELIMLADITPETKVVLAHML--AVDAGER 159

Query: 158 GMLGGQ----MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           GM+GGQ      +     +   ++  +Q  KTGAL+ +AC +G  +A A +     +R +
Sbjct: 160 GMVGGQAADIAAESAAAALTLGEIESLQAKKTGALVEWACAAGPRIAGADE---MPMRQY 216

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
           G  LG  FQ+ADD+LD   D  
Sbjct: 217 GRALGRAFQIADDILDVTGDAE 238


>gi|90109651|pdb|2FTZ|A Chain A, Crystal Structure Of Geranyltranstransferase (Ec 2.5.1.10)
           (Tm0161) From Thermotoga Maritima At 1.90 A Resolution
          Length = 284

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 82/197 (41%), Gaps = 9/197 (4%)

Query: 41  SAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
            A+ Y A +GG +IR  LV        V     L V  A+E  H  SLIHDDLP +DN  
Sbjct: 36  EAMLYSATVGGXRIRPLLVLTLGEDLGVEEEXLLDVAVAVELFHTASLIHDDLPPIDNAD 95

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRG P+ H  Y E  A++AG+GL   AF  IS           S+    L     +   
Sbjct: 96  FRRGXPSCHRTYGEDIALLAGDGLFFLAFSQISXIGNSXIFEEFSETAYXLLLGEAMDVE 155

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              + ++     + +  V  +    TGAL  F   +  I+          L   GE  G+
Sbjct: 156 FERRXME-----VSQEMVERMYAFXTGALFAFCFSAPFILXGXDHTXMXLL---GEXFGV 207

Query: 220 IFQLADDLLDCEEDLPK 236
            FQ+ DDL D      K
Sbjct: 208 AFQIYDDLXDILGSFEK 224


>gi|159041215|ref|YP_001540467.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167]
 gi|157920050|gb|ABW01477.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167]
          Length = 340

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 21/248 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   L    ++  + ++  ++  L           +      + Y +  GGK+IR  +V 
Sbjct: 1   MVDVLSELHEKYGELVNKAIERYLT-------IGVDPSFRETVLYQVATGGKRIRPLMVI 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           E A     +  +AL   A +E IH YSLI+DD+  +D   +RR  PTV  +Y +  AI+ 
Sbjct: 54  ESALACGGSLESALPYAAIVELIHNYSLIYDDI--IDEADLRRNMPTVRRKYGDYAAILV 111

Query: 120 GNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLG--GQMLDIQDEFIDETQ 176
           G        E +   +       + ++ + ++     L  ++   G+      E     +
Sbjct: 112 GIWYREAIEEAVLDTRNPSEVARVVAETIKAIDEGERLDILMEYSGRRDPYFIENRLVRE 171

Query: 177 --------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                      +  +KT AL   +   G   A     + E L  FG N+G+ FQ+ DD+L
Sbjct: 172 ITPALRDLYIRMISLKTAALFKTSMWLGGYSAKCGNEQLEALSNFGYNVGVAFQIIDDVL 231

Query: 229 DCEEDLPK 236
           D   DL K
Sbjct: 232 DIFGDLRK 239


>gi|85708095|ref|ZP_01039161.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1]
 gi|85689629|gb|EAQ29632.1| geranylgeranyl pyrophosphate synthase [Erythrobacter sp. NAP1]
          Length = 336

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A+L         ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 55  GGKRLRPMLTLAGAALVGYEGTRHHKLAAAVEFIHTATLLHDDV--VDGSELRRGKAAAN 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +     ++ G+ L + AFE+++   +     +R   +LS    +  +G +  Q+   +
Sbjct: 113 IVFGNPATVLVGDFLFSRAFELMTEDGS-----LRVLKILSHASAVIAEGEVS-QLTAQR 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E +   I   KT AL   A +  A++A  S  E+  L  +G NLG+ FQL DD +
Sbjct: 167 QIETSEERYLHIIGAKTAALFAAASQISAVVAECSDEEERALEDYGRNLGVAFQLVDDAI 226

Query: 229 DCEEDLPK 236
           D + D  +
Sbjct: 227 DYDSDAAQ 234


>gi|301784328|ref|XP_002927569.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
           [Ailuropoda melanoleuca]
          Length = 467

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 25/224 (11%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR- 74
           + I  +LL+ TA          L     Y   G GK  R  +V   A   N++H  +   
Sbjct: 160 EDIRKELLISTA---------ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDV 210

Query: 75  ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +    E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+ +L+ A 
Sbjct: 211 QASQRSIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAAS 268

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             ++        +I +Q++  L     L      Q+   ++E             KT +L
Sbjct: 269 IALARIGNTAVISILTQVIEDLVRGEFL------QLGSKENENERFAHYLEKTFKKTASL 322

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +C++ +++        E    +G+N+GI FQL DD+LD   
Sbjct: 323 IANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTS 366


>gi|260063737|ref|YP_003196817.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501]
 gi|88783182|gb|EAR14355.1| polyprenyl synthetase [Robiginitalea biformata HTCC2501]
          Length = 325

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 14/226 (6%)

Query: 11  ENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF- 65
           + S RI   +D    L +   H        LL+ I Y +    GK++R   V   A L  
Sbjct: 2   KTSARIREPIDKEMELFEKKFHQSMSSKVPLLNRITYYIVNRKGKQMRPMFVFLTAKLLN 61

Query: 66  -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               +    R  + IE IH  SL+HDD+  +D  + RRG  +++  +    A++ G+ LL
Sbjct: 62  EGQVNERTYRGASVIELIHTASLVHDDV--VDESFKRRGFFSINALWKNKIAVLVGDFLL 119

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
                ++ S      D +R   ++S       +G L  Q+   +   I E   + I + K
Sbjct: 120 ARG--MLLSVDNGDFDLLR---IISAAMREISEGELL-QLEKARRLDITEEVYYEIIRQK 173

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           T  L+   C  GA          E  R FGE  G+ FQ+ DDL D 
Sbjct: 174 TATLIAACCSLGAASVRPDSEYVEMFRKFGERCGMAFQIKDDLFDY 219


>gi|119964240|ref|YP_948800.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Arthrobacter aurescens TC1]
 gi|119951099|gb|ABM10010.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Arthrobacter aurescens TC1]
          Length = 367

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 22/234 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   +  N  R++  L + +  +   +    +  L+ A      GGK+IR  L   C
Sbjct: 45  DAELGPAITTNLARVEKKLREAISNSDP-LADATSRHLVEA------GGKRIRPLLTLLC 97

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L + +    ++    +E  H  +L HDD+  MD+   RRG PT H  +    AI+ G+
Sbjct: 98  AHLGDASRPEVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAILTGD 155

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            +   A  ++S   +      R+  + + T       +  GQ+ +      DE       
Sbjct: 156 LIFARASILVSELGS------RALGIQARTFER----LCLGQLHETVGPREDEDPVEHYL 205

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   KTG+L+  + + GAI A A ++ ++ L  +GE +G+ FQLADD++D   
Sbjct: 206 SVIADKTGSLVAASGQLGAIFAGADESYEDLLVEYGEKVGVAFQLADDVIDVTG 259


>gi|198274095|ref|ZP_03206627.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135]
 gi|198273173|gb|EDY97442.1| hypothetical protein BACPLE_00232 [Bacteroides plebeius DSM 17135]
          Length = 326

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 12/227 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + ++  L++        + T  +  L   + Y     GK +R  LV   A LF   + +
Sbjct: 10  KQPVEKELEEFRGLFEDSL-TSTDPLLGEVLAYIKKRSGKMMRPILVMLTAKLFGTLNES 68

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                 ++E +H  SL+HDD+  +D    RRG+ +V+  Y+   +++ G+ +L  + +  
Sbjct: 69  TFHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNAIYNNKVSVLVGDYMLATSLKHA 126

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +         + + L   L+    L      Q+ +I  E   E   F + + KT AL   
Sbjct: 127 ALTGKVELVELVATLGQELSEGEIL------QLGNIGKEDFSEEAYFDVIRKKTAALFKA 180

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
           + +SGA+   A Q E  +    GE +GI FQ+ DD+ D  E  +L K
Sbjct: 181 SSQSGAVSVGAVQEEVMKAGLLGEMIGIAFQIKDDIFDYFESPELGK 227


>gi|47531118|gb|AAT35222.1| fusion of carotene synthesis proteins [synthetic construct]
          Length = 1798

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 7/222 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T+L   + + A          L +A+  AL  GK+ R  L+   A        T +    
Sbjct: 335 TLLQTRIEEIAQGFGAVLQP-LGAAMA-ALSSGKRFRGMLMLLAAEASGGVCDTIVDAAC 392

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H  SLI DDLP MD+  +RRG+P  H+ + E  A++ G  L+T A  +++  +  
Sbjct: 393 AVEMVHAASLIFDDLPCMDDAGLRRGQPATHVAHGESRAVLGGIALITEAMALLAGAR-G 451

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               +R+QL+  L+ ++G QG+  GQ LD+         V   Q +KTG L     E  A
Sbjct: 452 ASGTVRAQLVRILSRSLGPQGLCAGQDLDLHAAKNG-AGVEQEQDLKTGVLFIAGLEMLA 510

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           ++      E+ ++  FG  LG +FQ  DDLL+   D   L K
Sbjct: 511 VIKEFDAEEQTQMIDFGRQLGRVFQSYDDLLEVVGDQAALGK 552


>gi|326798537|ref|YP_004316356.1| trans-hexaprenyltranstransferase [Sphingobacterium sp. 21]
 gi|326549301|gb|ADZ77686.1| Trans-hexaprenyltranstransferase [Sphingobacterium sp. 21]
          Length = 323

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 10/218 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL+E  K I T LDD  ++    M++     L     Y +   GK++R   V   A    
Sbjct: 3   KLEEIKKPIATELDDFEIKFKESMRSSVP-LLDRITHYIVKRKGKQMRPMFVFFAAGACG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             + +  R  A +E +H  +L+HDD+  +DN Y RRG  +V+  +    A++ G+ LL+ 
Sbjct: 62  GINESTHRGAALVELVHTATLVHDDV--VDNSYQRRGFFSVNALWKNKIAVLVGDFLLSK 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +    +      I ++ +  ++    L      QM   +   IDE   F + + KT 
Sbjct: 120 GLSLSVKNQDFEFLRILNEAVTEMSEGELL------QMEKARRLDIDEGVYFEVIRQKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +L+   C  GA   +A      ++  FGE +GI FQ+ 
Sbjct: 174 SLIASCCACGAASTNAPSELVTKMHDFGEKVGIAFQIK 211


>gi|322369459|ref|ZP_08044024.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253]
 gi|320551191|gb|EFW92840.1| Dimethylallyltranstransferase [Haladaptatus paucihalophilus DX253]
          Length = 351

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 33/243 (13%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-- 65
           +++  + ++  +++        +     +RL  A RY L  GGK++R  ++   A     
Sbjct: 17  VEQRRELVNAAIEE-------ELPIVEPERLYEASRYLLDAGGKRLRPTVLLLVADALAD 69

Query: 66  --------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
                         +   L  +    +IE I  ++LIH     MD+  +RRG P+VH  Y
Sbjct: 70  VEPMSEAYRKFPALDGTELDVMAAAVSIEVIQSFTLIH--DDIMDDDDLRRGVPSVHRAY 127

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           D  TAI+AG+ L + AFEI+          + +  +L+ T       +  GQ LD+  E 
Sbjct: 128 DTETAILAGDTLYSKAFEIMLETDATPDRCVTALDVLAST----CTRICEGQALDVAFEE 183

Query: 172 IDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             +    +   + + KT  L   A +  A++  A +   E L  +G ++G  FQ+ DD+L
Sbjct: 184 RPDVLPDEYLEMIENKTAVLYGAAAKVPAVLLGADEETTEALYRYGIDVGRAFQIQDDVL 243

Query: 229 DCE 231
           D  
Sbjct: 244 DLT 246


>gi|167580495|ref|ZP_02373369.1| octaprenyl-diphosphate synthase [Burkholderia thailandensis TXDOH]
          Length = 297

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L+   A     +      + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 29  AGGKRLRPALLLLVAGALGEHTSQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTA 86

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++
Sbjct: 87  NALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNM 140

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD 
Sbjct: 141 HDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDW 200

Query: 228 LDCEE 232
           LD   
Sbjct: 201 LDYAG 205


>gi|282162809|ref|YP_003355194.1| polyprenyl synthetase [Methanocella paludicola SANAE]
 gi|282155123|dbj|BAI60211.1| polyprenyl synthetase [Methanocella paludicola SANAE]
          Length = 342

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 26/239 (10%)

Query: 16  IDTILDDLLLQTASHMQTQHNDR-----LLSAIRYALLG-------------GKKIRSFL 57
           +  IL++    T   M+   N+R     L   + Y L G             GK +RS +
Sbjct: 5   VTPILEEYSAYTDRQMRAVLNNRKRVGRLYDMMMYHL-GWLDEDFRECRAPRGKSLRSTM 63

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                   + +   AL   AA+E +H +SLIHDD+   D    RR + T+   +    AI
Sbjct: 64  CLLACEAISGDSNKALPAAAAVELLHNFSLIHDDIE--DGDVKRRHRDTLWKLWGVPQAI 121

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
             G+ +   A   +      ++  +   ++     N  +  +  GQ LD+  +   +   
Sbjct: 122 NTGDAMDIAANLSLLDLDGTVEPGMMVDIIRIF--NQTVIELCEGQYLDMDFQGRSDVSV 179

Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   +   KT AL+  +   GA++A   ++   R   FG  +GI FQ+ DD+L    D
Sbjct: 180 GEYITMVSGKTAALIEASTAIGAMVATGDRDVISRFGTFGRKIGIAFQIRDDILGIWGD 238


>gi|239927463|ref|ZP_04684416.1| polyprenyl synthatase [Streptomyces ghanaensis ATCC 14672]
          Length = 342

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +      T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 51  GGKAVRPALAVLSAEVTGAAPQTGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T   D  R+   L+      + G       + +
Sbjct: 109 KVHGPAQAILVGDALFALANEVLLELGT--VDAGRAARRLTTASRALIDGQAQDISYEHR 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 167 DR-VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADSLEKYGYHLGLAFQAVDDLL 225

Query: 229 DCEED 233
               D
Sbjct: 226 GIWGD 230


>gi|260653869|dbj|BAI44337.1| geranylgeranyl diphosphate synthase [Streptomyces
           melanosporofaciens]
          Length = 359

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 94/242 (38%), Gaps = 24/242 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV--NH 69
             K +D +L+D L   A      H   L   ++  L GGK+IR  L            + 
Sbjct: 16  VRKSVDVVLEDFLTAKAHTTPQHHLPYLSGLLKDFLSGGKRIRPLLCVTGWQAVGGGEDT 75

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDE 113
               RV A +E  H ++LIHDD+  MD+   RRG+PT+H                 ++  
Sbjct: 76  EPVFRVAACLEMFHAFALIHDDV--MDDSDTRRGRPTIHRTLAALCATDRRPEQIERFGV 133

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             A++ G+  LT++ E++ S             +LS      + G      L    E  D
Sbjct: 134 SGAVLLGDLALTWSDELLHSAGLTPVQFDAVLPLLSEMRTEVMLGQYL--DLQATGELTD 191

Query: 174 ETQV-FMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + +    + + KT    +      GA +A A     E    +   LG  FQL DDLL   
Sbjct: 192 DVEATLTVNRYKTAKYTIERPLHVGAAIAGAGPEAMEAFTAYALPLGEAFQLRDDLLGVY 251

Query: 232 ED 233
            D
Sbjct: 252 GD 253


>gi|255974147|ref|ZP_05424733.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2]
 gi|256617997|ref|ZP_05474843.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200]
 gi|257083089|ref|ZP_05577450.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1]
 gi|257417357|ref|ZP_05594351.1| trans-hexaprenyltranstransferase [Enterococcus faecalis AR01/DG]
 gi|257418078|ref|ZP_05595072.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11]
 gi|300861510|ref|ZP_07107594.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
 gi|255967019|gb|EET97641.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T2]
 gi|256597524|gb|EEU16700.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ATCC 4200]
 gi|256991119|gb|EEU78421.1| trans-hexaprenyltranstransferase [Enterococcus faecalis Fly1]
 gi|257159185|gb|EEU89145.1| trans-hexaprenyltranstransferase [Enterococcus faecalis ARO1/DG]
 gi|257159906|gb|EEU89866.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T11]
 gi|300848971|gb|EFK76724.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
 gi|315144088|gb|EFT88104.1| polyprenyl synthetase [Enterococcus faecalis TX2141]
          Length = 328

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
           L++ A  +  Q     +  + ++  GGK +R       +      +   A  + A+IE +
Sbjct: 23  LMEQAVQIDNQEIQAAVHDMIHS--GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELL 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK   
Sbjct: 81  HTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK--- 135

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM +  +  +   Q       KT  L   +C  GA  +  
Sbjct: 136 -SIQLNSRSMEKVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGT 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           SQ   +R    GEN+G+ FQ+ DD+LD  +
Sbjct: 194 SQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223


>gi|145355263|ref|XP_001421884.1| chloroplast Clp protease, subunit of ClpP peptidase complex
           [Ostreococcus lucimarinus CCE9901]
 gi|144582123|gb|ABP00178.1| chloroplast Clp protease, subunit of ClpP peptidase complex
           [Ostreococcus lucimarinus CCE9901]
          Length = 311

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 14/219 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLTAL 73
           ++ L L     +  ++   L +A +    GGK++R  LV   A         +       
Sbjct: 1   MEQLRLNLRDIIGRKNPLLLAAADQIFGAGGKRLRPVLVFLVARATAELMHMSDITDRQR 60

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRGK T+H  Y    AI+AG+ L   +   +++
Sbjct: 61  RLAEITEMIHTASLVHDDV--LDDCDTRRGKETIHTLYGARVAILAGDFLFAQSSWFLAN 118

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   + SQ++               Q   + +  +   +       KT +L+  +C
Sbjct: 119 LDNLEVIKLISQVIADFADGEIS------QAGALFNCDLTLDEYLEKSHNKTASLIAASC 172

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +S A+ +  +++ K  +  +G++LG+ FQ+ DD+LD  +
Sbjct: 173 KSAAVFSEVTESVKVDMYEYGKHLGLAFQVVDDILDFTQ 211


>gi|256785921|ref|ZP_05524352.1| polyprenyl diphosphate synthase [Streptomyces lividans TK24]
          Length = 298

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 16/199 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A ++ +  GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD 
Sbjct: 4   ITEAAQHLVRAGGKRFRPLLVMLSAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDE 61

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P+ + ++D   A++ G+ L   A +I++    +                +  +
Sbjct: 62  AAVRRGVPSANTRWDNSVAVLTGDFLFARASQILADLGPEAV----------RVQALAFE 111

Query: 158 GMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            ++ GQ+L+    QD          +   KTG+L+  +C  GA+M+ A +   + L  +G
Sbjct: 112 RLVTGQILETAGPQDGRDPVDHYLDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYG 171

Query: 215 ENLGIIFQLADDLLDCEED 233
           E LG+ FQLADD+LD   D
Sbjct: 172 ERLGVAFQLADDVLDIASD 190


>gi|62959211|gb|AAY23713.1| farnesyl diphosphate synthase [Synechococcus cf. elongatus
           CCMP1379]
          Length = 145

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDMPWMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPDVPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E    +    +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|1842242|gb|AAC44848.1| geranylgeranyl synthase [Flavobacterium sp. ATCC 21588]
          Length = 295

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 2/216 (0%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +++  L Q +            +    AL  GK+ R+ L+   A          +    
Sbjct: 11  DLVEIRLAQISGQFGVVSAPLGAAMSDAALSPGKRFRAVLMLMVAESSGGVCDAMVDAAC 70

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H  SLI DD+P MD+   RRG+P  H+ + E  A++AG  L+T A  I+   +  
Sbjct: 71  AVEMVHAASLIFDDMPCMDDARTRRGQPATHVAHGEGRAVLAGIALITEAMRILGEARGA 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             D  R++L+ S++  +G  G+  GQ LD+     D   +   Q +KTG L     E  +
Sbjct: 131 TPDQ-RARLVASMSRAMGPVGLCAGQDLDLHAPK-DAAGIEREQDLKTGVLFVAGLEMLS 188

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I+    + E E+L  FG  LG +FQ  DDLLD   D
Sbjct: 189 IIKGLDKAETEQLMAFGRQLGRVFQSYDDLLDVIGD 224


>gi|62959239|gb|AAY23727.1| farnesyl diphosphate synthase [Nocardia sp. JL-538]
          Length = 145

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLPSMDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E    +    +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|29377703|ref|NP_816857.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecalis V583]
 gi|256854910|ref|ZP_05560274.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8]
 gi|257080330|ref|ZP_05574691.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol]
 gi|257091474|ref|ZP_05585835.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188]
 gi|307274532|ref|ZP_07555713.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
 gi|29345171|gb|AAO82927.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecalis V583]
 gi|256710470|gb|EEU25514.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T8]
 gi|256988360|gb|EEU75662.1| trans-hexaprenyltranstransferase [Enterococcus faecalis E1Sol]
 gi|257000286|gb|EEU86806.1| trans-hexaprenyltranstransferase [Enterococcus faecalis CH188]
 gi|306508804|gb|EFM77893.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
 gi|315580811|gb|EFU93002.1| polyprenyl synthetase [Enterococcus faecalis TX0309A]
          Length = 328

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
           L++ A  +  Q     +  + ++  GGK +R       +      +   A  + A+IE +
Sbjct: 23  LMEQAVQIDNQEIQAAVHDMIHS--GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELL 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK   
Sbjct: 81  HTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK--- 135

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM +  +  +   Q       KT  L   +C  GA  +  
Sbjct: 136 -SIQLNSRSMEKVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGT 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           SQ   +R    GEN+G+ FQ+ DD+LD  +
Sbjct: 194 SQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223


>gi|28493021|ref|NP_787182.1| heptaprenyl diphosphate synthase component II [Tropheryma whipplei
           str. Twist]
 gi|28476061|gb|AAO44151.1| probable heptaprenyl diphosphate synthase component II [Tropheryma
           whipplei str. Twist]
          Length = 338

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 26/238 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +G L   +     R++    DLLL+T        +  L       + GGK+ R  LV   
Sbjct: 15  SGSLSDDISPALDRVE----DLLLETVGDCHEIVSHLL-------VSGGKRARPLLVLLT 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + + +  +   +R  A IE IH  SL HDD+  MDN YIR G  T H  + +  AI+AG+
Sbjct: 64  SCMGSGINDAVIRAAAGIELIHLGSLYHDDV--MDNAYIRHGSITAHRLWGKSAAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A  +  +   +                   Q M+ GQ+ +   I D         
Sbjct: 122 FLFAKAGVLGLNLDKRAIA----------VQTEAFQRMISGQLSETLGISDSLDPLEAYI 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + + KTG+L+  + + GAI+  AS +  E LR FGE++G+ FQL DD++D      K
Sbjct: 172 EVSRGKTGSLIAASAQVGAILGDASPSTLEPLRDFGESIGVAFQLVDDVIDLSGKSGK 229


>gi|302555532|ref|ZP_07307874.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
 gi|302473150|gb|EFL36243.1| polyprenyl synthatase [Streptomyces viridochromogenes DSM 40736]
          Length = 380

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A + +    T +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 89  GGKAVRPALAVLSAEVMSAAPETGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 146

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 147 KVHGPAQAILVGDALFALANEMLLELGTVEAG--RATRRLTTATRALIDGQAQDISYEHR 204

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 205 DR-VTVEECLEMEGNKTGALLACASSIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLL 263

Query: 229 DCEED 233
               D
Sbjct: 264 GIWGD 268


>gi|332188683|ref|ZP_08390398.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
 gi|332011300|gb|EGI53390.1| polyprenyl synthetase family protein [Sphingomonas sp. S17]
          Length = 336

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L      +   + AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 55  GGKRMRPMLTLASAQLLGYRGTSHHVLAAAVEFIHTATLLHDDV--VDGSDLRRGRRTAN 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L + +F+++    +     ++   +LS    +  +G +  Q+  ++
Sbjct: 113 IIWGNPASVLVGDFLFSRSFQLMVDAGS-----LKVLNILSGASAVIAEGEVN-QLTAVR 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              + E +   I   KT AL   AC   A++A   + E+  L  +G NLGI FQL DD +
Sbjct: 167 QVGLPEERYLSIIDAKTAALFAAACRIAAVVAERPEAEELALEAYGRNLGIAFQLIDDAI 226

Query: 229 DCEEDLP 235
           D   D  
Sbjct: 227 DYVSDAG 233


>gi|260887775|ref|ZP_05899038.1| heptaprenyl diphosphate synthase component II [Selenomonas
           sputigena ATCC 35185]
 gi|330838673|ref|YP_004413253.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185]
 gi|260862451|gb|EEX76951.1| heptaprenyl diphosphate synthase component II [Selenomonas
           sputigena ATCC 35185]
 gi|329746437|gb|AEB99793.1| Trans-hexaprenyltranstransferase [Selenomonas sputigena ATCC 35185]
          Length = 324

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 8/189 (4%)

Query: 49  GGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L    A    + +    + +  A+E IH  SL+HDD+  +D+   RRG  T 
Sbjct: 43  GGKRLRPALFLLAARSSKDFDAKKMMPLAVALELIHMASLVHDDV--LDHADTRRGAVTA 100

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    AI++G+     AF +I       + + R   ++    +  +      Q  ++
Sbjct: 101 NAMWGNQQAILSGDYFFARAFLLIVENGFGERVSGRVAQLIMDLSSGEII-----QNKEL 155

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                D  + +     KT   +   CE GAI  +     +  LR +G+ +G+ FQ+ DDL
Sbjct: 156 YRASRDVEEYYERIAKKTANFLAICCELGAIATNLGAEAERGLRAYGKYVGMAFQITDDL 215

Query: 228 LDCEEDLPK 236
           LD   +  K
Sbjct: 216 LDLTSNEKK 224


>gi|295114543|emb|CBL33180.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76]
          Length = 323

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
           L++ A  +  Q     +  + ++  GGK +R       +      +   A  + A+IE +
Sbjct: 18  LMEQAVQIDNQEIQAAVHDMIHS--GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELL 75

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK   
Sbjct: 76  HTATLVHDDI--VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK--- 130

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM +  +  +   Q       KT  L   +C  GA  +  
Sbjct: 131 -SIQLNSRSMEKVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGT 188

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           SQ   +R    GEN+G+ FQ+ DD+LD  +
Sbjct: 189 SQRFAKRCGEIGENIGLAFQIIDDILDYTQ 218


>gi|295837107|ref|ZP_06824040.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74]
 gi|197697218|gb|EDY44151.1| trans-hexaprenyltranstransferase [Streptomyces sp. SPB74]
          Length = 336

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L D        +         +A    L GGK+ R  LV   
Sbjct: 13  DQALEADVQAGLTAVEEGLLDATKSGVPFITE-------AAQHLVLAGGKRFRPLLVMLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +     +E  H  +L HDD+  MD   +RRG  + + ++D   A++ G+
Sbjct: 66  AQFGDPEAPGVVPSAVVVELTHLATLYHDDV--MDEATVRRGVESANARWDNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L + A +I++    +                   + ++ GQ+L+    QD         
Sbjct: 124 FLFSRASQILAGLGPEAV----------RIQAEAFERLVTGQILETAGPQDGRDPVDHYL 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  A   GA+M+ A     E L  +GE LG+ FQLADD+LD   D
Sbjct: 174 DVLSGKTGSLVAVATRYGAMMSGAGSEAVEILTQYGERLGVAFQLADDVLDIASD 228


>gi|170587658|ref|XP_001898591.1| Polyprenyl synthetase family protein [Brugia malayi]
 gi|158593861|gb|EDP32455.1| Polyprenyl synthetase family protein [Brugia malayi]
          Length = 394

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 106/254 (41%), Gaps = 34/254 (13%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQT---------QHNDRLLSAIRYAL-LGGKKIR 54
           LPS +++  K + + + + L++ A +  +                   +Y    GGK  R
Sbjct: 47  LPSFIRDKLKALQSEIMETLVRNAENSPSLLSTCFSSSAFTKTFQEMAKYYFDQGGKLFR 106

Query: 55  SFLVTECASLFNVNHLTAL--------------RVGAAIECIHCYSLIHDDLPSMDNGYI 100
             +    A   N     ++              ++    E IH  SL+HDD+  +D   I
Sbjct: 107 PTICLLMARACNQFEPKSMLVDSGRDTVTRNQYKIAVISEMIHTASLVHDDV--IDKADI 164

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  T++  +    A++ G+ +L  A +++ S       ++ + ++  L     +    
Sbjct: 165 RRGSRTINALWGNKMAVLVGDFILARATQVLCSIGRPSVISVMATIIEDLVKGEFM---- 220

Query: 161 GGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
             QM D  D    +   +       KT +L   +C+S A+++  S+ ++     +G++LG
Sbjct: 221 --QMNDGTDLNATQRFNKYMAKTYSKTASLFANSCKSAAMLSDVSEADELSAYEYGKSLG 278

Query: 219 IIFQLADDLLDCEE 232
           I FQ+ DDLLD   
Sbjct: 279 IAFQMIDDLLDYVS 292


>gi|289767672|ref|ZP_06527050.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289697871|gb|EFD65300.1| polyprenyl synthetase [Streptomyces lividans TK24]
          Length = 354

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 63  GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 121 KVHGPAQAILVGDALFALANEVLLELGTVEAG--RATRRLTKASRSLIDGQAQDISYEHR 178

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 179 DR-VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLL 237

Query: 229 DCEED 233
               D
Sbjct: 238 GIWGD 242


>gi|293376156|ref|ZP_06622402.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
 gi|325845300|ref|ZP_08168603.1| putative heptaprenyl pyrophosphate synthase component 2
           [Turicibacter sp. HGF1]
 gi|292645229|gb|EFF63293.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
 gi|325488661|gb|EGC91067.1| putative heptaprenyl pyrophosphate synthase component 2
           [Turicibacter sp. HGF1]
          Length = 321

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 15/223 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
            + ++++ I++  L    S M     D        A  GGKKIR  L        + +  
Sbjct: 13  AHLEQVNHIINQQLTVKQSKMNEILKDL-------AQSGGKKIRPGLCIIGGEFGDKDIK 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               + A +E +H  +L+HDD+  +D+   RRG+ T   +Y +  A+  G+ + T  FEI
Sbjct: 66  HLYHLSAVLEMLHMATLVHDDI--IDDSVQRRGQLTTQQKYGKDYAVYTGDYIFTKCFEI 123

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++         +     LS T +    G +  Q            +   +   KT AL+ 
Sbjct: 124 LAEHY-----ELHHMKELSKTVSRVCMGEI-DQFDGRFKSHTSVKKYLKVIGAKTSALLA 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   GA  +   +   ++L   G ++G  FQ+ DD+LD   D
Sbjct: 178 VSLSVGAYESGCDEKFCKKLGKIGLHIGNAFQIIDDILDYVGD 220


>gi|13541888|ref|NP_111576.1| octaprenyl diphosphate synthase [Thermoplasma volcanium GSS1]
 gi|14325322|dbj|BAB60226.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
          Length = 326

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 18/219 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL-FNVNHLTALRVGA 77
           ++++  +    ++++  D L    +Y +  GGK+ R  L         +  +   L + A
Sbjct: 15  IEEVNERLFEVVKSEEPD-LDRMAKYTIEAGGKRFRPLLTILAFESSTDDPYFKILDLAA 73

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             E IH  SLIHDD+  +D+  +RRG+PT+  +     AI+  + L   A+E+ S     
Sbjct: 74  GYELIHTASLIHDDI--IDDSPMRRGRPTLSYKEGINNAIVVADYLFAKAYELGSRYGP- 130

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACE 194
                    ++S         +  GQ+L+  +     I E   + I + KT         
Sbjct: 131 ---------LVSKVMADASSRLAEGQILEAVNLGNLDITEDTYYKIIENKTAHFFEACAL 181

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              I+A A +  +E L  F  NLG+ FQ+ DD+LD   D
Sbjct: 182 GATIVAEADRPTREILSNFAFNLGMAFQVTDDILDIVGD 220


>gi|114566500|ref|YP_753654.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337435|gb|ABI68283.1| polyprenyl synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 313

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 12/205 (5%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N ++   I Y L   GK +R  L+   AS +  + L    +G A+E IH  SL+HDD+  
Sbjct: 5   NPQVEPIIDYLLESSGKMLRPRLLYLAASPYPHDPLMVRDMGVAVELIHLASLVHDDV-- 62

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D    RRG+ +++ +Y+  T+++ G+ L   AF +I+        +  ++ +  +    
Sbjct: 63  IDQALTRRGQESINSRYNNKTSVLTGDLLFATAFNLINQHPFPQVMDQITRTIQLMCQGE 122

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
                   Q+    +  + E + +     KT  L   +C  GA ++   +     L  +G
Sbjct: 123 I------KQLSLAFNLDVSEEEYYEKSYSKTACLFACSCRVGAWISSMPEKYASLLEEYG 176

Query: 215 ENLGIIFQLADDLLDCEED---LPK 236
             LG  +Q+ DD+LD   D   L K
Sbjct: 177 LYLGYAYQIIDDILDLVADSQALGK 201


>gi|297163084|gb|ADI12796.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
           BCW-1]
          Length = 337

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A         AL    A+E +H +SL+HDDL  MD    RR + TV  
Sbjct: 53  GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   +AI+ G+ +L  A E++              L  +  H      ++ GQ+ D+  
Sbjct: 111 LWGPSSAILTGDAMLALAQEVLLDTGLPTAAPAARLLARTTRH------LIRGQVQDLSF 164

Query: 170 E---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E    +   +   +   KTGAL+  +   GA++A A +   + L  +G+ +G+ FQL DD
Sbjct: 165 EQRSHVTVEECIDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224

Query: 227 LLDCEED 233
           +L    D
Sbjct: 225 VLGIWGD 231


>gi|219848508|ref|YP_002462941.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
 gi|219542767|gb|ACL24505.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
          Length = 343

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 10/235 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           +   + ++++     ++  L         H+  ++ D L  AI      GK IR  LV  
Sbjct: 7   VKAQIQAEMRAAFPVVEGRLSRFYAMQEYHLGWRNED-LTPAIA---DPGKLIRPQLVLL 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             +    +   AL + A I+ +H +SLIHDD+   D+  +RRG+ T+   +     I AG
Sbjct: 63  ACTAAGGDPQQALPLAAGIQLLHDFSLIHDDIE--DDSAMRRGRRTLWHIWGLAHGINAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           + +   A   I           R   +L     + L+ +  GQ LD+  E    I     
Sbjct: 121 DAMFVIAHLAIHRLADVGVPAERVLAILRRFDEVILR-ICEGQYLDLSFEGDLSITPDDY 179

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KT AL+  A E GA +A A +     L  FG  LG+ FQ+ DD+L    
Sbjct: 180 LTMIGGKTAALIAGAAELGARVAGAPEATVTALAEFGRALGLGFQIEDDILGIWG 234


>gi|333023935|ref|ZP_08451999.1| PlaT4 [Streptomyces sp. Tu6071]
 gi|81250709|gb|ABB69754.1| PlaT4 [Streptomyces sp. Tu6071]
 gi|332743787|gb|EGJ74228.1| PlaT4 [Streptomyces sp. Tu6071]
          Length = 359

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 71/222 (31%), Positives = 98/222 (44%), Gaps = 19/222 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT---ALR 74
           T  DD L    +H     +  L +A       GK +R+ L       F  +         
Sbjct: 44  TRFDDRLRPMVAHHFGWPSSDLPTA----TTSGKMVRATLTVLTGECFTTDAEAISRVTA 99

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            GAA+E IH +SLIHDD+  MD    RRG+P V  +Y    AI+ G+ LL  A  ++  P
Sbjct: 100 AGAAVEMIHNFSLIHDDV--MDGDRERRGRPAVWHEYGIPAAILTGDLLLAQAPLMLDGP 157

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191
                   R            +  +  GQM D+  E   E    +   +   KTGAL+  
Sbjct: 158 WAADPRATRLL-------AEAVARLAAGQMADLSLEGRPEASPDEALAVAADKTGALLAC 210

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ACE GA++A AS+    R   FG  LG+ FQ+ADD+L    D
Sbjct: 211 ACELGALLAGASEEATRRFSRFGLRLGLAFQIADDILGIWGD 252


>gi|294012754|ref|YP_003546214.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S]
 gi|292676084|dbj|BAI97602.1| octaprenyl-diphosphate synthase [Sphingobium japonicum UT26S]
          Length = 346

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA L         ++ AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 65  GGKRMRPMLTLACADLVGYAGSRHYKLAAAVEFIHTATLLHDDV--VDGSGLRRGRKTAN 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L + +FE++   ++     ++   +LS    +  +G +  Q+   +
Sbjct: 123 IIWGNSASVLVGDFLFSRSFELMVEAES-----LKVLKILSNASAVIAEGEVN-QLTAQR 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E Q   I   KT AL   AC   A++A   + E++ L  +G NLGI FQL DD +
Sbjct: 177 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRDEAEEQALDVYGRNLGIAFQLIDDAI 236

Query: 229 DCEED 233
           D E D
Sbjct: 237 DYESD 241


>gi|269794087|ref|YP_003313542.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
 gi|269096272|gb|ACZ20708.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
          Length = 337

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L  +L      ++  L D +   A  +    +  L+ A      GGK++R  L    
Sbjct: 12  DPDLAERLGVRLAYVEERLRDSVTH-ADELANTTSRHLVDA------GGKRLRPLLALLT 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L        +     +E  H  +L HDD+  MD+  +RRG P  H  +    AI+ G+
Sbjct: 65  AELGESARPEVIDAAVVVELTHLATLYHDDV--MDSAPLRRGAPAAHEVWGNSVAILTGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVF 178
            L   A   ++    +                   + +  GQ+ +      DE       
Sbjct: 123 LLFARASVTVAGLGPEAV----------RWQAETFERLCLGQLHETVGPRPDEDPVQHYL 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KT +L+  +   GA  A       E +  FGE +G+ FQLADD++D   D
Sbjct: 173 QVLSDKTASLIATSARFGARYAGCRPEIVEIVANFGEKVGVAFQLADDVIDLTSD 227


>gi|146278076|ref|YP_001168235.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556317|gb|ABP70930.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17025]
          Length = 288

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 91/200 (45%), Gaps = 9/200 (4%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHD 90
           ++   +L SA+ YA+  GG +IR  L+   A+    +          A+E IHC SL+HD
Sbjct: 21  SEAPSKLASALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP  D+  IRRGKPT H  Y E  AI+ G+ L+   FE+++             +    
Sbjct: 81  DLPCFDDAEIRRGKPTTHRAYSEPLAILTGDSLIVMGFEVLARAAGDQPQRALQLVTALA 140

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G+  GQ      E   +  +    + KTGAL   A + GAI A     E E  
Sbjct: 141 VRTGMPMGICAGQGW----ESESQINLSAYHRAKTGALFIAATQMGAIAAGY---EAEPW 193

Query: 211 RCFGENLGIIFQLADDLLDC 230
              G  +G  FQ+ADDL D 
Sbjct: 194 EELGARIGEAFQVADDLRDA 213


>gi|156540259|ref|XP_001602352.1| PREDICTED: similar to CG31005-PA [Nasonia vitripennis]
          Length = 426

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 16/238 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHM-QTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
           G LP    +  + ++  L ++       +     ++ L +   Y   G GK +R  +   
Sbjct: 96  GSLPDYRIDPYQLLEDDLKNVYEDIRRELVANTSHEELRTIATYYFGGQGKALRPMVAIL 155

Query: 61  CASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            A   N +   +       +V    E IH  SL+HDD+  +D    RRGKP+V+  + + 
Sbjct: 156 MARAINYDKDQSGLLASQRQVAMISEMIHNASLVHDDV--VDQSDFRRGKPSVNALWSQK 213

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
              +AG+ +L  A  +I+  +        SQ++  L     +      Q+   + E    
Sbjct: 214 KVTMAGDFILAVASMMIARLQNDDVTLTLSQVITDLVQGEFM------QLGSKETENERF 267

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                    KT +L+  + ++ A++  A +   E    +G N+G+ FQL DDLLD   
Sbjct: 268 AHYLTKTYRKTASLIANSAKAVAMLGGADERLAELAFQYGRNIGLAFQLVDDLLDFVS 325


>gi|52550277|gb|AAU84126.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
           GZfos37B2]
          Length = 280

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 10/184 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGKKIR  ++   + LF  +    +    AIE IH  SLIHDD+  +D G +RRG P+V+
Sbjct: 38  GGKKIRPIILILSSELFGGDADECVDAALAIELIHSASLIHDDI--LDVGLVRRGVPSVY 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+    AI+ G+ L++ + E+IS     +        +                 ++  
Sbjct: 96  NQFGLAAAILCGDFLISKSIELISKYDRAV--------IQDFGRAGMSMSEGEALDVNSN 147

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E   F     KT +L   +   G+ +  A      R   +G +LG+ +Q+ DD+L
Sbjct: 148 ETNFSENDYFECISKKTASLFAASARMGSRIGGAPARSINRCTEYGTHLGMAYQIIDDIL 207

Query: 229 DCEE 232
           +C+E
Sbjct: 208 ECKE 211


>gi|226196886|ref|ZP_03792465.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan
           9]
 gi|225931146|gb|EEH27154.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei Pakistan
           9]
          Length = 278

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L+   A     N      + A +E IH  +L+HDD+  +D   +RRG+ T 
Sbjct: 29  AGGKRLRPALLLLVAGALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTA 86

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    +++ G+ L + +FE++          +R   +LS    I  +G +  Q+L++
Sbjct: 87  NALFGNAASVLVGDYLYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNM 140

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D  +DE +   + + KT  L   A   GA++A A    +     +G  +G  FQ+ DD 
Sbjct: 141 HDADVDEARYMQVIRYKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDW 200

Query: 228 LDCEE 232
           LD   
Sbjct: 201 LDYAG 205


>gi|239982232|ref|ZP_04704756.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 347

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 17/228 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  + +DT+   +      H   +    L S       GGK +R  LV            
Sbjct: 28  ELRRAVDTLPAPVRRVARYHFGWEDAAGLPSGAN----GGKAVRPALVLAAVHALGGRPE 83

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            ALR  AA+E  H ++L+HDD+  +D    RR +PT    + +  AI+AG+ L + A + 
Sbjct: 84  RALRSAAAVELTHNFTLLHDDV--IDRDRTRRHRPTAWTVFGDADAILAGDALQSLAQQW 141

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKT 185
           ++           ++L         +  +  GQ  D   E      +   +   + + KT
Sbjct: 142 LAEDPHPRAGAAVARL------ARCVIELCAGQHTDCALEDRAPTEVSLDECLTMAESKT 195

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  AC  GA+ A A  ++   L  FG   G+ FQL DD++    D
Sbjct: 196 GALLGCACALGALHADAEPDQVNALDAFGREAGLAFQLIDDIIGIWGD 243


>gi|61653256|gb|AAX48209.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium
           DelRiverFos06H03]
          Length = 304

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 12/223 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           R +  L     Q A    T    RL++A+R+A+  GG +IR  L    A+    N     
Sbjct: 6   RAEHALSTHFEQAAG---TGAPPRLVAAMRHAVFSGGARIRPQLCMAVATACGDNAPHLT 62

Query: 74  RVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
              A A+E +HC SL+HDD+P+ DN   RRG PTVH  + E  A++AG+GL+  A+ ++ 
Sbjct: 63  DAAAVALELMHCASLVHDDMPAFDNADTRRGLPTVHKAFSEPLALLAGDGLIVMAYRVLL 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
               Q  D + + +           G++ GQ  + +        +   Q+ KTGAL   A
Sbjct: 123 QAGVQQPDRLVALMDNLTAGVGLPHGIVAGQAWECE----TSADLGQYQRAKTGALFVSA 178

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +GA+    +      L   G+ LG  +Q+ADD+ D   D  
Sbjct: 179 TCAGALSCGVAPEPWAFL---GQYLGEAYQVADDIRDVIADAA 218


>gi|255578548|ref|XP_002530137.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223530362|gb|EEF32253.1| geranylgeranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 417

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 37/251 (14%)

Query: 11  ENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLV 58
           ++S  I+  LD          LL      M      +L SA  Y   +G  GK+ R  ++
Sbjct: 68  QSSSLIEDQLDPFSLVADELSLLANKLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVL 127

Query: 59  TECASLFNVNHLTALR-----------------VGAAIECIHCYSLIHDDLPSMDNGYIR 101
              A+  NV+                       +    E IH  SL+HDD+  +D+   R
Sbjct: 128 LLMATALNVHIPEPTPTGVGDVVATELRARQQSIAEITEMIHVASLLHDDV--LDDADTR 185

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG  +++       A++AG+ LL+ A   ++S K     ++ + ++  L     +     
Sbjct: 186 RGIGSLNFVMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGETM----- 240

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            QM    ++             KT +L+  +C++ A++A  +         +G+NLG+ F
Sbjct: 241 -QMTSTSEQRCSMEYYMQKTYYKTASLISNSCKAIALLAGQTAEVAMLAFEYGKNLGLAF 299

Query: 222 QLADDLLDCEE 232
           QL DD+LD   
Sbjct: 300 QLIDDVLDFTG 310


>gi|319778271|ref|YP_004129184.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
 gi|317108295|gb|ADU91041.1| Octaprenyl-diphosphate synthase [Taylorella equigenitalis MCE9]
          Length = 303

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 77/246 (31%), Positives = 122/246 (49%), Gaps = 18/246 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
                S L+E  K  +  L+++              +LL  +RYA LG GK++R+ LV  
Sbjct: 7   TSHFDSWLEEVVKFSNRHLEEIFSSLH-----DVPPKLLEVMRYATLGPGKRLRAALVLA 61

Query: 61  CASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
              +F      +      RV  +IE IH YSL+HDDLP MD+  +RRG+PT H++Y E  
Sbjct: 62  TYEVFQTTSPDSYDDYISRVVCSIELIHAYSLVHDDLPCMDDDDLRRGRPTCHVKYGEAM 121

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFID 173
           A++A + L   ++E +    + +   +       L    G  GM+GGQ++DI +    +D
Sbjct: 122 ALLAADALQPLSYEHL--LGSHIDSKLLVSSTKELLRATGATGMVGGQVIDILNISNHMD 179

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +  +   KTGAL+    E  +I+   S    E L+ + E +GI +Q+ DD+LD  +D
Sbjct: 180 LEALKDMHSRKTGALIQACVEVVSILFKDSSLYYEELKRYSEYIGIAYQVVDDILDATQD 239

Query: 234 ---LPK 236
              L K
Sbjct: 240 SDTLGK 245


>gi|302559082|ref|ZP_07311424.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
 gi|302476700|gb|EFL39793.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
          Length = 336

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L +   ++   + T     L+ A      GGK+ R  LV   
Sbjct: 13  DQALEADVQAGLTAVEEGLLEA-TKSEVPLITGAAQHLVRA------GGKRFRPLLVMLS 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G+
Sbjct: 66  AQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVASANARWGNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A  I++    +                   + ++ GQ+L+    QD         
Sbjct: 124 FLFARASHILADLGPEAV----------RVQAEAFERLVTGQILETAGPQDGRDPVDHYL 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  +C  GA+M+ A     + L  +GE LG+ FQLADD+LD   D
Sbjct: 174 DVLGGKTGSLVAVSCRFGAMMSGADDTVVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|62959179|gb|AAY23697.1| farnesyl diphosphate synthase [Bacillus sp. JL-39]
 gi|62959189|gb|AAY23702.1| farnesyl diphosphate synthase [Kocuria sp. JL-51]
 gi|62959199|gb|AAY23707.1| farnesyl diphosphate synthase [Rhodococcus sp. JL-61]
 gi|73811207|gb|AAY23722.1| farnesyl diphosphate synthase [Sagittula sp. JL-351]
          Length = 145

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDLPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E    +    +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|227487152|ref|ZP_03917468.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227541680|ref|ZP_03971729.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227092810|gb|EEI28122.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227182648|gb|EEI63620.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 340

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 22/232 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L + +  + +R++    +LL +  +H +   N+++   I  A  GGK+ R       + 
Sbjct: 23  ELAATVSRDLQRVE----ELLQKELNHGEDFVNEKV---IHLAAAGGKRFRPMFAVLASQ 75

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           L    +    ++    +E  H  +L HDD+  MD    RRG  + + ++    AI+AG+ 
Sbjct: 76  LGTRASCEDVIKAATVVEMTHLATLYHDDV--MDEADRRRGVESANARWGNSVAILAGDI 133

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMI 180
           LL +A  ++++  T          +       G   ++ GQM +       +       +
Sbjct: 134 LLAHASRLMATLGTD--------TVAHFAQTFG--DLVTGQMRETVGPGDGDKIEHYLNV 183

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KTG L+  A   GA+    S      L+ FG  +G IFQ+ DD++D   
Sbjct: 184 VHEKTGVLISSAGYLGALHGGCSPEITRALQQFGVYIGTIFQIVDDIIDIFS 235


>gi|118595231|ref|ZP_01552578.1| trans-hexaprenyltranstransferase [Methylophilales bacterium
           HTCC2181]
 gi|118441009|gb|EAV47636.1| trans-hexaprenyltranstransferase [Methylophilales bacterium
           HTCC2181]
          Length = 321

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 102/232 (43%), Gaps = 15/232 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   + S +  +   ++ ++   L      +    N  + S       GGK++R  +   
Sbjct: 1   MLSTILSPISNDLNEVNNVIRKSLFSEIPIVNQISNHIINS-------GGKRMRPSIHLL 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L    + +   + A IE IH  +L+HDD+  +D    RR K T +  +   ++++ G
Sbjct: 54  FAKLTGEINTSHHAMAAIIEFIHTATLLHDDV--VDQSTQRRSKKTANALFGNSSSVLVG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + + + +F++++       +N+    +L+   N   +G +  Q+L+ ++  + E   F +
Sbjct: 112 DFIYSRSFQMMTKI-----NNMEVMEILADATNAISEGEIL-QLLNTKNPDLSENDYFQV 165

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT  L         ++    Q +++ L   G   GI+FQL DD+LD   
Sbjct: 166 IGFKTAKLFESCGSLAGVLNEVDQEKQKDLAKLGNIFGIMFQLTDDILDYSG 217


>gi|118085662|ref|XP_418592.2| PREDICTED: similar to PDSS1 protein [Gallus gallus]
          Length = 366

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 25/231 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
           ++     + I  +LL+ TA          L     Y   G GK  R  +V   A   N++
Sbjct: 52  KDLKNLYEDIKKELLVSTA---------ELREMCEYYFDGKGKAFRPMIVVLMARACNIH 102

Query: 69  HLTAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           H  +         V    E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+
Sbjct: 103 HSNSREVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRRGKMTVNQIWGERKAVLAGD 160

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            +L+ A   ++        ++ +Q++  L     L      Q+   ++E           
Sbjct: 161 FILSAASLALARIGNTTIISVLTQVIEDLVRGEFL------QLGSKENENERFAHYLEKT 214

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT +L+  +C++ +I+        E    +G+N+GI FQL DD+LD   
Sbjct: 215 FKKTASLIANSCKAVSILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTS 265


>gi|319953718|ref|YP_004164985.1| trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237]
 gi|319422378|gb|ADV49487.1| Trans-hexaprenyltranstransferase [Cellulophaga algicola DSM 14237]
          Length = 325

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 16/227 (7%)

Query: 17  DTILDDL-LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLT 71
           + I++++ L +   +        LL+ I + +    GK++R   V   + L      +  
Sbjct: 9   EPIIEEMELFEKKFYESMTSKVALLNRITHYIVNRKGKQMRPMFVFLTSKLINNGEVNER 68

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R  + IE IH  +L+HDD+  +D    RRG  +++  +    A++ G+ LL+    ++
Sbjct: 69  TYRGASVIELIHTATLVHDDV--VDESNKRRGFFSINALWKNKIAVLVGDYLLSKG--LL 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
            S      D ++   ++S+      +G L  Q+   +   I E   + I + KT  L+  
Sbjct: 125 LSIDNGDFDLLK---IISVAVREMSEGELL-QIEKARRLDITEAIYYEIIRQKTATLIAA 180

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED--LPK 236
            C  GA        E E  R FGE  G+ FQ+ DDL D   D  + K
Sbjct: 181 CCSLGACSVKPDSEEVEVFRKFGEYCGMAFQIKDDLFDY-GDAAIGK 226


>gi|219129739|ref|XP_002185039.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403534|gb|EEC43486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 325

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 25/227 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL----GGKKIRSFLVTECASLFNVNHLTA--- 72
           LD L       +    +  L  A  Y       GGKK+R  +V   +   N         
Sbjct: 9   LDKLSKSIREDLLGTDHPVLSKAASYFFKATSDGGKKVRPMMVLLLSRALNWQRSDLPQA 68

Query: 73  -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL HDD+  +D    RRG P+VH+ +    AI+AG+ LL  A   +
Sbjct: 69  QRRLAEISEMIHTASLFHDDV--IDGAETRRGAPSVHMVFGNKMAILAGDYLLARASICL 126

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------TQVFMIQKMKT 185
           +  +               T +  ++ ++ G+++ ++     E               KT
Sbjct: 127 ARLRNVEVVE---------TMSTIIEHLVRGEVMQLRGSTSSERSGERLVYYLRKNFYKT 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G+LM  +C+S A++        +    FG+++G+ FQL DD+LD E 
Sbjct: 178 GSLMANSCKSAALLGEYPNELVDASYRFGKHVGMAFQLVDDVLDFEG 224


>gi|298207668|ref|YP_003715847.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850305|gb|EAP88173.1| polyprenyl synthetase [Croceibacter atlanticus HTCC2559]
          Length = 311

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 14/215 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRV 75
           ++D   +    M +Q    LL+ I + +    GK++R   V   A +      +    R 
Sbjct: 1   MEDFEKRFRQSMSSQVA--LLNRITHYVVNRKGKQMRPMFVFLVAKMVSEGSVNDRTYRG 58

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S  
Sbjct: 59  AAVIELIHTATLVHDDI--VDDSNRRRGFFSINALWKNKIAVLVGDYLLSKG--LLLSID 114

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
               D ++   ++S+      +G L  Q+   +   I E   + I K KT  L+   C  
Sbjct: 115 NNDFDLLK---IISVAVREMSEGELL-QIEKARRLDITEDVYYDIIKKKTATLIAACCSL 170

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           GA   + + ++   +R FGE +G+ FQ+ DDL D 
Sbjct: 171 GAASVNPNSDDVTLMRLFGEKIGMAFQIKDDLFDY 205


>gi|282890377|ref|ZP_06298905.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499759|gb|EFB42050.1| hypothetical protein pah_c016o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 297

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL 70
              +++  ++  +    +        ++  A  YAL  GGK+ R  LV   A        
Sbjct: 10  YQAQVEAKIEQSIAALGAK------SKVRDACEYALRNGGKRFRPALVLMVAKTLGKQAD 63

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +     A+E  H  SLI DDLP MDN   RR  P++H  + E  A++A   L+   +  
Sbjct: 64  AS-EAALAVEFFHTASLIADDLPCMDNDDERRNMPSLHKVFGEDIALLASYALIAEGYRY 122

Query: 131 ISSPKTQLK----------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           ++     LK          D++    + ++++N GL G  GGQ LDI +  +  + +  I
Sbjct: 123 LAQNSETLKQQQVSFSDRCDHLCVLAIQNVSYNTGLFGATGGQFLDIHESNLSLSALRDI 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
              KT +L   +   G +       +   ++    + G+ FQ+ADDL D ++DL 
Sbjct: 183 LHKKTVSLFEISFVLGWLFGGGELEKLPLVKKAASHFGMAFQIADDLSDMQQDLK 237


>gi|319938731|ref|ZP_08013095.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
 gi|319811781|gb|EFW08047.1| geranyltranstransferase [Streptococcus anginosus 1_2_62CV]
          Length = 300

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 125/236 (52%), Gaps = 15/236 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           K  E   RI   ++ L  Q            L+ AI Y++  GGK+IR  L+ E      
Sbjct: 2   KQDEKLARIGQTIEGLYAQKVVSAD------LIEAILYSVNAGGKRIRPLLLLELLEGLG 55

Query: 67  VNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +       +V AA+E IH  SLIHDDLP+MD+   RRG+ T H ++ E  AI+AG+ L  
Sbjct: 56  LELTEAHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEAMAILAGDSLFL 115

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKM 183
            ++ +I+     L   I+  L+  L+   G  GM+GGQ+LD+Q E   I   ++  I   
Sbjct: 116 DSYALIAEAA--LPSQIKVNLIAELSLAAGTFGMVGGQVLDMQGEGKDISLAELQNIHAN 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           KTG L+ +   +  ++A  +Q ++E+LR  G+ LG+ FQ+ DD+LD     E+L K
Sbjct: 174 KTGKLLTYPFIAAGLIAEVAQPQQEKLRKIGQLLGLAFQVRDDILDITANFEELGK 229


>gi|124485508|ref|YP_001030124.1| GCN5-related N-acetyltransferase [Methanocorpusculum labreanum Z]
 gi|124363049|gb|ABN06857.1| Polyprenyl synthetase [Methanocorpusculum labreanum Z]
          Length = 322

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 16/230 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L   L+  + ++D   D+      S +Q        +A    + GGK++R  LV   A  
Sbjct: 3   LDEYLKSVAAKVDMEADEYSKAVDSTLQK-------AASHLLVSGGKRLRPALVLLSAES 55

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     +   A+E  H ++L+HDD+  MD   +RRG+PTVH+ ++E TAI+AG+ L
Sbjct: 56  IRKGASEDIFQAALALEWTHTFTLVHDDI--MDGDSLRRGRPTVHVVWNEATAILAGDVL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
              AFE +   K    +   S+++           +  GQ  D+  E    +   +   +
Sbjct: 114 YANAFEYLCRVKNATAE---SKVIAVQMLAHSCHELCEGQQEDVSFETRSDVTLEEYLSM 170

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            + KTG L   A   GA +A     +   L   G N GI FQ+ DD++D 
Sbjct: 171 VRKKTGVLYAAAAGIGAALAGGDVKQISALYTLGLNTGIAFQIQDDIIDL 220


>gi|27377259|ref|NP_768788.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
 gi|27350402|dbj|BAC47413.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum USDA 110]
          Length = 335

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 14/235 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            +Q+ +KR++  L  LL       +      L++A+RYA L GGK+ R+ L     +L +
Sbjct: 39  WMQDGAKRVEEALARLLC-----AEDDGETELMAAMRYATLHGGKRTRALLCLAAGALAD 93

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+ G+ L  +
Sbjct: 94  TPAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 153

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           AF  ++S        I    +  L   +  +G  GGQ +D+    + ++  ++  + +MK
Sbjct: 154 AFLTLASLNAPGDSPIAL--VRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMK 211

Query: 185 TGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEEDLP 235
           +GAL+  +   GA+ A         L C    +    G+  Q+ DD+LD   D  
Sbjct: 212 SGALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTA 266


>gi|92112233|ref|YP_572161.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM
           3043]
 gi|91795323|gb|ABE57462.1| farnesyl-diphosphate synthase [Chromohalobacter salexigens DSM
           3043]
          Length = 285

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 13/231 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           +     R + +L  ++ + A       +  L +A+RY++LGG K++R  LV         
Sbjct: 1   MTTARARTEQVLAGIVERAAP-----VSGELDAAMRYSVLGGGKRLRPILVYAAGHALGA 55

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                    AA+E IH YSL+HDDLP+MD+  +RRG+PTVH  Y E  AI+AG+ L T A
Sbjct: 56  EDKALDAPAAAVELIHAYSLVHDDLPAMDDDDMRRGRPTVHRAYSEAMAILAGDALQTLA 115

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKT 185
           FE+++  +          ++ +L +  G +GM  GQ LD+      +D   +  +   KT
Sbjct: 116 FEVLAETRHP----RLGAMVRALANASGREGMAAGQALDLSAVGGRLDVDALATMHGYKT 171

Query: 186 GALMCFACESGAI-MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A   GA+  A         L  +   +G+ FQ+ DD+LD   D  
Sbjct: 172 GALIRAAVRLGALAAADEDDPRVAALDTYAAAIGLAFQIQDDILDVAGDAA 222


>gi|126341457|ref|XP_001376077.1| PREDICTED: similar to PDSS1 protein [Monodelphis domestica]
          Length = 412

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 17/221 (7%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR---- 74
           L DL       +     + L     Y   G GK  R  +V   A   NV+H         
Sbjct: 100 LTDLYEDIKKELLVSTTE-LKEMCEYYFDGRGKAFRPIVVVLMARACNVHHNNCRDMQAS 158

Query: 75  ---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
              +    E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   +
Sbjct: 159 QRSIALIAEMIHTASLVHDDI--IDDASSRRGKHTVNQIWGEKKAVLAGDFILSAASVAL 216

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +        ++ +Q++  L     L      Q+   ++E             KT +L+  
Sbjct: 217 ARIGNTTIVSVLTQVIEDLVRGEFL------QLGSKENENERFAHYIEKTFKKTASLLAN 270

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +C++ +I+        E    +G+N+GI FQL DD+LD   
Sbjct: 271 SCKAVSILGCPDPVVHEIAYQYGKNIGIAFQLIDDVLDFTS 311


>gi|88803606|ref|ZP_01119131.1| polyprenyl synthetase [Polaribacter irgensii 23-P]
 gi|88780618|gb|EAR11798.1| polyprenyl synthetase [Polaribacter irgensii 23-P]
          Length = 325

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 12/211 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +            LL+ I Y +    GK++R   V   A +           R  A +
Sbjct: 17  LFEEKFKDSMLSKVPLLNRITYYIVRRKGKQMRPMFVFLVAKMVSNGGFDERTYRGAAVV 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+  +RR   +V+  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDI--VDDSNMRRSFFSVNALWKNKIAVLVGDFLLSKG--LLLSIDNNDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D ++   ++S+      +G L  Q+   +   I E   F I + KT  L+   C  GA  
Sbjct: 133 DLLK---LISIAVREMSEGELL-QIEKARKLDITEAIYFDIIRKKTATLIAACCGIGAAS 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             A+Q+   ++R FGE +GI FQ+ DDL D 
Sbjct: 189 VGANQDCIRKMRKFGEYIGIAFQIKDDLFDY 219


>gi|307330864|ref|ZP_07609998.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
           4113]
 gi|306883489|gb|EFN14541.1| Trans-hexaprenyltranstransferase [Streptomyces violaceusniger Tu
           4113]
          Length = 329

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 15/231 (6%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L ++L+      +  L  L  +       +    L         GGK++R  L    
Sbjct: 7   DPALTTRLERGMDASEEQLRALATEARDPWVAEVAGHLFG------NGGKRLRPLLALVG 60

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   + +   A+R     E +H  SL HDD+  MD    RRG P+V+ ++   TA++AGN
Sbjct: 61  AEFGDRDPSAAVRAATLAELVHVASLYHDDV--MDQARTRRGVPSVNARWGNTTAVLAGN 118

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL+ A ++ +       + IR Q  ++    +G    L G      D+    +  F + 
Sbjct: 119 WLLSKAAQLAAELG---PEAIRLQSKVTNRLIMGQIRELVG----PSDDDDPLSHYFTVV 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             K+ +L+  A + GA+   A +   + L  +GE+LGI FQ++DD+LD   
Sbjct: 172 AGKSASLIAMALQLGAVRTGAPEPAVQALAEYGEHLGIAFQISDDILDITS 222


>gi|270158512|ref|ZP_06187169.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968]
 gi|289166652|ref|YP_003456790.1| octaprenyl-diphosphate synthase [Legionella longbeachae NSW150]
 gi|269990537|gb|EEZ96791.1| octaprenyl-diphosphate synthase [Legionella longbeachae D-4968]
 gi|288859825|emb|CBJ13806.1| putative octaprenyl-diphosphate synthase [Legionella longbeachae
           NSW150]
          Length = 322

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   +          + + A IE  H  +L+HDD+  +D+  +RRG+ T +
Sbjct: 43  GGKRLRCLLVLLASRACGYEGKEHIMLAAMIEFFHTATLLHDDV--IDDSTLRRGRDTAN 100

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +I+ G+ L T   E++      + D    QL++ +   +G   +   Q  +  
Sbjct: 101 KIWGNKASILVGDYLFTKYLELMVE----VGDIDIIQLLIGIAPQMGCGEI--QQFSNRH 154

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +   + F + + KT  L   +   GA+++ +    ++ +  +G +LG  FQL DD L
Sbjct: 155 NADLSVEEYFDMIRAKTALLFAASSAIGALISKSEHQIQKAMYSYGLHLGNAFQLIDDAL 214

Query: 229 DCEED 233
           D   D
Sbjct: 215 DYCSD 219


>gi|297159526|gb|ADI09238.1| putative polyprenyl diphosphate synthase [Streptomyces
           bingchenggensis BCW-1]
          Length = 336

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 22/232 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +  Q     ++  L +   ++     T     L+ A      GGK+ R  LV   A  
Sbjct: 16  LEADTQAGLTAVEEGLLEA-TKSDVPFITGAAQHLMRA------GGKRFRPLLVLLAAQF 68

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +      +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G+ L 
Sbjct: 69  GDPYAPGVVPSAVVVELTHLATLYHDDV--MDEADVRRGVASANARWGNSVAVLTGDFLF 126

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQ 181
             A  I++    +                   + ++ GQ+L+    +D          + 
Sbjct: 127 ARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPRDGQDPIEHYLDVL 176

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KTG+L+  +   GA+M+ A ++    L  +GE LGI FQLADD+LD   D
Sbjct: 177 QGKTGSLVAVSGRFGAMMSGADESVVSILTQYGERLGIAFQLADDVLDIASD 228


>gi|329769096|ref|ZP_08260517.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325]
 gi|328839442|gb|EGF89019.1| hypothetical protein HMPREF0433_00281 [Gemella sanguinis M325]
          Length = 315

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 16/227 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASL--F 65
           L++  + +  +L D+ + T S      +++L   I+ Y   GGK++R  L+  C+ L  F
Sbjct: 2   LKQYDELVQEVLKDIFVITKSE-----DEKLNQVIKKYFSAGGKRVRVLLLLICSKLGDF 56

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N N    +R+ + +E IH  SLIHDD+  +D    RRG  T++ ++ +  A++ G+ L  
Sbjct: 57  NNNKKNIIRMASIVEIIHTASLIHDDI--IDKAETRRGNITLNKEFGDEFALLVGDYL-- 112

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F I+    ++ ++ +    + +    + +  ++  Q   + +            K KT
Sbjct: 113 --FSIVLREVSEFENELIHSYLATTLKELCIGELI--QEDGLYNLNTRRLDYLRKIKRKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             L+ FA  SG+I++ A + + +    FG  LG+ +Q+ DD LD   
Sbjct: 169 AILIAFATVSGSIISGAKKEDVDSSYRFGYYLGMSYQIIDDYLDFAG 215


>gi|329767887|ref|ZP_08259401.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341]
 gi|328838675|gb|EGF88274.1| hypothetical protein HMPREF0428_01098 [Gemella haemolysans M341]
          Length = 315

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 19/235 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFN- 66
           L++    +  +L+D+L      +    +DRL   I RY L GGK++R  L+  CA L N 
Sbjct: 2   LKQYDMLVHDVLEDIL-----DITKCDDDRLNEIIKRYFLNGGKRVRVLLLLMCAKLGNF 56

Query: 67  -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            +N    +R+ + +E IH  SLIHDD+  +DN   RRG  T++ +Y    A+  G+ L  
Sbjct: 57  ELNRKDIIRMASIVEIIHTASLIHDDI--IDNADTRRGSITMNKEYTNEFALHVGDYL-- 112

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F I+ +   +  D      +      + +  ++  Q   + +            K KT
Sbjct: 113 --FAIVLNEVAKFSDERIHNYLAETLKELCIGELI--QADGLYNIKTRRIDYLKKIKRKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
             L+ FAC +G+I++ AS    +    +G  LG+ +Q+ DD LD      +L K+
Sbjct: 169 AILIAFACVAGSIVSKASDENIKSAFSYGYYLGMSYQIIDDYLDFAGGAENLGKE 223


>gi|302148849|pdb|3NF2|A Chain A, Crystal Structure Of Polyprenyl Synthetase From
           Streptomyces Coelicolor A3(2)
          Length = 352

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 53  GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 111 KVHGPAQAILVGDALFALANEVLLELGTVEAG--RATRRLTKASRSLIDGQAQDISYEHR 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 169 DR-VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLL 227

Query: 229 DCEED 233
               D
Sbjct: 228 GIWGD 232


>gi|311112076|ref|YP_003983298.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931]
 gi|310943570|gb|ADP39864.1| trans-hexaprenyltranstransferase [Rothia dentocariosa ATCC 17931]
          Length = 370

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +  RI+  L + +  T            ++A    L GGK++R  L    A++    +  
Sbjct: 58  SLARIEERLAEAISYTDKLAD-------VAARHLLLAGGKRVRPLLTLLAAAVDGQINDD 110

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +     +E  H  +L HDD+  MD+   RRG  T    +    AI+ G+ + + A  ++
Sbjct: 111 VIEAAVVVELTHLATLYHDDV--MDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLV 168

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S   T      R   + + T    + G L       +++ I       + + KTG+L+  
Sbjct: 169 SDLGT------RPMKIQAQTFERLVLGQLYETTGVRENQDI-LDHYIAVIEGKTGSLIAA 221

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A E G+++A AS+   + L  +GE +G+ FQLADD++D   D
Sbjct: 222 AGEYGSLLAGASEEVIQMLATYGELVGVAFQLADDVIDIVSD 263


>gi|8272410|dbj|BAA96457.1| farnesyl diphosphate synthase [Rhodobacter sphaeroides]
          Length = 256

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 8/198 (4%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +RYA+ GGK++R FLV E A L  +    A+   A+IE +H YSL+HDD+P MD+  +RR
Sbjct: 1   MRYAVQGGKRLRGFLVLESARLHGIAPEAAVSAAASIEALHAYSLVHDDMPCMDDDDLRR 60

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G PTVH ++DE TA++AG+ L T AFE+++ P       +R +L+ SL    G +GM+ G
Sbjct: 61  GLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAAVRIELVASLAKASGAEGMVLG 119

Query: 163 QMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           Q LDI  E     +   Q+  +Q  KTGAL+ ++ E+GAI+  A    +  LR +   LG
Sbjct: 120 QALDIAAETAAVPLTLDQITHLQAGKTGALIRWSAEAGAILGQAD---RVPLRRYATALG 176

Query: 219 IIFQLADDLLDCEEDLPK 236
           + FQ+ADD+LD E D  K
Sbjct: 177 LAFQIADDILDVEGDAEK 194


>gi|217420539|ref|ZP_03452044.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576]
 gi|217395951|gb|EEC35968.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 576]
          Length = 242

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 15/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L + +  + ++++ ++   L      +  Q  + ++ A      GGK++R  L+   A
Sbjct: 14  AHLLAPIASDMEQVNRVIRQSLASDVL-LINQIAEYIIGA------GGKRLRPALLLLVA 66

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                N      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    +++ G+ 
Sbjct: 67  GALGENTNQKHVLAAVVEFIHTATLLHDDV--VDESELRRGRKTANALFGNAASVLVGDY 124

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + +FE++          +R   +LS    I  +G +  Q+L++ D  +DE +   + +
Sbjct: 125 LYSRSFEMMVGVG-----KMRVMEILSEATTIISEGEVL-QLLNMHDADVDEARYMQVIR 178

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L   A   GA++A A    +     +G  +G  FQ+ DD LD   
Sbjct: 179 YKTAKLFEAAARLGAVLAGADAPTEAAAAEYGRRIGTAFQIMDDWLDYAG 228


>gi|256760927|ref|ZP_05501507.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3]
 gi|256682178|gb|EEU21873.1| trans-hexaprenyltranstransferase [Enterococcus faecalis T3]
          Length = 328

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 10/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECI 82
           L++ A  +  Q     +  + ++  GGK +R       +      +   A  + A+IE +
Sbjct: 23  LMEQAVQIDNQEIQAAVHDMIHS--GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELL 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +L+HDD+  +D    RRG PT+   +   TA+  G+ L    F+++S   + LK   
Sbjct: 81  HTATLVHDDI--VDEADTRRGLPTLRSHFGNSTAVYTGDYLFVCCFKLLSDYSSSLK--- 135

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S  + S +    L G L GQM +  +  +   Q       KT  L   +C  GA  +  
Sbjct: 136 -SIQLNSRSMEKVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGT 193

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           SQ   +R    GEN+G+ FQ+ DD+LD  +
Sbjct: 194 SQRFAKRCGEIGENIGLAFQIIDDILDYTQ 223


>gi|218258587|ref|ZP_03474930.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225357|gb|EEC98007.1| hypothetical protein PRABACTJOHN_00585 [Parabacteroides johnsonii
           DSM 18315]
          Length = 324

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 12/226 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + +         + A+ ++++ N RL SAI   L   GK IR  LV   A          
Sbjct: 9   QPVAVEFKRFNDEFAASLRSETN-RLQSAIDQILNASGKHIRPLLVLLAAKACGQVTDNT 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +     +E +H  +LIHDD+  +D    RRG P+++  +D   +++ G+ +L+ A     
Sbjct: 68  INSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL---- 121

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
             ++    N++   ++S       +G +  Q+   ++  IDE+    + + KT  L+   
Sbjct: 122 -IRSIQTGNLQIIGIVSNLGRDLSEGEIK-QLETAEESIIDESCYMQVIRKKTAMLLSAC 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
            E G+I A AS    E+ R FGE LG  FQ+ DD+ D   E ++ K
Sbjct: 180 SEIGSISAGASGEMVEKCREFGEYLGYCFQIKDDIFDYFKEANIGK 225


>gi|241895189|ref|ZP_04782485.1| possible trans-hexaprenyltranstransferase [Weissella
           paramesenteroides ATCC 33313]
 gi|241871495|gb|EER75246.1| possible trans-hexaprenyltranstransferase [Weissella
           paramesenteroides ATCC 33313]
          Length = 342

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 10/231 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E    +   L D+L    + +Q    +   + +     GGK +R          +  N
Sbjct: 24  MWEKFPTVQQELQDVLFIIQNSLQANDKEVEQALLDMFRAGGKMLRPAFAIIIGQFYPGN 83

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + AA+E +H  +LIHDD+  +D+   RR  P++  ++ +  A  AG+ L    F
Sbjct: 84  TSNLKHIAAAVEMLHTATLIHDDI--IDDSPERRHAPSIQSKFGKDIAAYAGDYLFAATF 141

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           + ++     +    ++  +L       L G L  Q  +  D  +           KT AL
Sbjct: 142 KTLAYHTDDMTLVRQATKLLED----ILTGELT-QRTNHYDRHMTLADYKEQIAGKTAAL 196

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
              + + GA    A     + +  F  N+G+ FQ+ DD+LD +    DL K
Sbjct: 197 FVLSAQLGAANGDAPDEFVDLVTEFAFNVGMAFQILDDILDYQSTKTDLGK 247


>gi|76802484|ref|YP_327492.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
           dimethylallyltransferase / geranyltranstransferase /
           farnesytranstransferase ) [Natronomonas pharaonis DSM
           2160]
 gi|76558349|emb|CAI49939.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase
           (probable dimethylallyltransferase / probable
           geranyltranstransferase / probable
           farnesytranstransferase) [Natronomonas pharaonis DSM
           2160]
          Length = 341

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 110/257 (42%), Gaps = 36/257 (14%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             + S + E  + ++  + + L         Q  +RL SA RY L  GGK++R  ++   
Sbjct: 5   DHVESAIAERREIVNEAVSEQL-------PVQKPERLYSASRYLLDAGGKRLRPTILLLA 57

Query: 62  ASLF----------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A                     + +  L    +IE I  ++LIH     MD+  +RRG P
Sbjct: 58  AESLADVEPLSADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIH--DDIMDDDDLRRGVP 115

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            VH +YD  TAI+AG+ L + AFE +       + ++ +   L+ T       +  GQ L
Sbjct: 116 AVHREYDLETAILAGDTLYSKAFEYMLDTGAPAERSVEALDELATT----CTEICEGQAL 171

Query: 166 DIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           D+  E   +    +   + + KT  L   A    AI+  +     E L  +G ++G  FQ
Sbjct: 172 DVDFENRSDVTTEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQ 231

Query: 223 LADDLLDCEE---DLPK 236
           + DDLLD      +L K
Sbjct: 232 IQDDLLDLTAPSDELGK 248


>gi|300857719|ref|YP_003782702.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685173|gb|ADK28095.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205461|gb|ADL09803.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
           pseudotuberculosis C231]
          Length = 339

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 36/244 (14%)

Query: 2   NGGLPSKLQENSKRIDTIL-------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR 54
           N  L   +     R++ +L       +D +++   H+                 GGK+ R
Sbjct: 20  NPALNEDISAGMTRVEELLQKELCVGEDFIVEKVKHLAN--------------AGGKRFR 65

Query: 55  SFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
                  +   +       ++    +E  H  +L HDD+  MD    RRG  + + +++ 
Sbjct: 66  PMFALLASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVESANARWNN 123

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEF 171
             AI+AG+ LL +   +++   T          +   +   G   ++ GQM +     E 
Sbjct: 124 SVAILAGDILLAHVSRLMADLGTD--------TVRHFSETFG--DLVTGQMRETIGVGEG 173

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                   + + KTG L+  A   GA+ + A+ +  E LR +G  +G++FQ+ DD++D  
Sbjct: 174 DPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIF 233

Query: 232 EDLP 235
            D  
Sbjct: 234 SDSE 237


>gi|119714798|ref|YP_921763.1| trans-hexaprenyltranstransferase [Nocardioides sp. JS614]
 gi|119535459|gb|ABL80076.1| Trans-hexaprenyltranstransferase [Nocardioides sp. JS614]
          Length = 334

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L S+L++    ++  L   ++  A  + ++    L++A      GGK+ R  LV   
Sbjct: 14  DEALASRLRDRMAAVEVALAGHVVSRAGFV-SETASHLMAA------GGKRFRPLLVLLA 66

Query: 62  ASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A      +    +     +E  H  SL HDD+  MD   +RRG  + + ++D   AI+ G
Sbjct: 67  AETGEHPDADEVITAACVVELTHLASLYHDDV--MDEAELRRGAVSANARWDNHVAILTG 124

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QV 177
           + L + + E+ +       D +R Q             ++ GQ+L+       E      
Sbjct: 125 DFLFSKSSELTAELG---PDAVRVQ-------ARTFTRLVEGQILETVQPGPGEDPLAHY 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  +   GA    AS+  +E L  +GE +G  FQL+DD+LD   D  
Sbjct: 175 LDVVAGKTGSLIATSAHYGARFGGASREVEEALTAYGEIVGSAFQLSDDILDIASDSG 232


>gi|225011597|ref|ZP_03702035.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004100|gb|EEG42072.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-2A]
          Length = 325

 Score =  164 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 11/188 (5%)

Query: 50  GKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK++R   V   A L           R  + IE IH  +L+HDD+  +D+   RRG  ++
Sbjct: 45  GKQMRPMFVFLVAKLVGNGKVNERTYRGASVIELIHTATLVHDDV--VDDSNKRRGFFSI 102

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +  +    A++ G+ LL+    ++ S + +  D ++   ++S+      QG L  Q+   
Sbjct: 103 NALWKNKIAVLVGDYLLSKG--LLLSIENEDFDLLK---IISVAVREMSQGELL-QIEKA 156

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++  I ET  + I + KT  L+   C  GA   +A+  E E++  FGE LG+ FQ+ DDL
Sbjct: 157 RNLDITETIYYEIIRQKTATLLASCCALGAQSVNATVEEVEKMHHFGEVLGMAFQIKDDL 216

Query: 228 LDCEEDLP 235
            D   D  
Sbjct: 217 FDY-GDQK 223


>gi|302543420|ref|ZP_07295762.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302461038|gb|EFL24131.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Streptomyces himastatinicus ATCC 53653]
          Length = 335

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 15/198 (7%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A ++ +  GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD 
Sbjct: 42  ITEAAQHLVRAGGKRFRPLLVLLAAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDE 99

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  + + ++    A++ G+ L   A  +++    +                   +
Sbjct: 100 AEVRRGVSSANARWGNSVAVLTGDFLFARASHVLADLGPEAV----------RVQAEAFE 149

Query: 158 GMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            ++ GQ+L+               +   KTG+L+  +   GA+M+ A ++    L  +GE
Sbjct: 150 RLVTGQILETAGPRGRDPIEHYLDVLAGKTGSLIAVSGRFGAMMSGADESIVNILTQYGE 209

Query: 216 NLGIIFQLADDLLDCEED 233
            LG+ FQLADD+LD   D
Sbjct: 210 RLGMAFQLADDVLDIASD 227


>gi|227533688|ref|ZP_03963737.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|301067307|ref|YP_003789330.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
 gi|227188672|gb|EEI68739.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|300439714|gb|ADK19480.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
          Length = 325

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 10/220 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           L   L      + T +     + +     GGK +R       +   +V+    + + AAI
Sbjct: 17  LASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAAI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D    RR + T+  Q+   TA+ AG+ L    F+++S   + L 
Sbjct: 77  ETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSL- 133

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
              RS    S +    L+G L  QM       I           KTG L   +C  GA  
Sbjct: 134 ---RSIQQDSGSMEKILKGEL-DQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYE 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           + +S    +     G N+GI FQL DD+LD   D   L K
Sbjct: 190 SGSSPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGK 229


>gi|91216014|ref|ZP_01252983.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
 gi|91185991|gb|EAS72365.1| polyprenyl synthetase [Psychroflexus torquis ATCC 700755]
          Length = 325

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 13/216 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +   H+       LL+ I + +    GK++R   V   A +      +    R  + I
Sbjct: 17  LFEKKFHLFMSSRVALLNKITHFIVNRKGKQMRPMFVFLVAKMVSKGEVNDRTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDI--VDDSNQRRGFFSINALWKNKIAVLVGDFLLSKG--LLLSIDNDDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D ++   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLLK---IISVAVREMSEGELL-QIEKARRLDITEDIYYEIIRQKTATLIAACCSLGAAA 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                 + E +R FGE +G+ FQ+ DDL D   D  
Sbjct: 189 VRPGSKDVEDMRKFGELIGMAFQIKDDLFDY-GDQK 223


>gi|53711383|ref|YP_097375.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46]
 gi|60679701|ref|YP_209845.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC
           9343]
 gi|253564510|ref|ZP_04841967.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5]
 gi|265764829|ref|ZP_06093104.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
           sp. 2_1_16]
 gi|52214248|dbj|BAD46841.1| octaprenyl-diphosphate synthase [Bacteroides fragilis YCH46]
 gi|60491135|emb|CAH05883.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis NCTC
           9343]
 gi|251948286|gb|EES88568.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_2_5]
 gi|263254213|gb|EEZ25647.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
           sp. 2_1_16]
 gi|301161165|emb|CBW20703.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis
           638R]
          Length = 324

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVAKLYGEIKPETLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  +       +      + + L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLVGDFLLATSLVHAERTRNHDIIGVVACLGQDLAEGEIL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               ET  F + + KT AL     ++ A+    +  + E  R FGEN+GI FQ+ DD+ D
Sbjct: 157 REYSETIYFDVIRKKTAALFAACTKAAALSVEVTDEKAEFARLFGENIGICFQIKDDIFD 216

Query: 230 CEE--DLPK 236
             E  ++ K
Sbjct: 217 YFESKEIGK 225


>gi|148652697|ref|YP_001279790.1| polyprenyl synthetase [Psychrobacter sp. PRwf-1]
 gi|148571781|gb|ABQ93840.1| Polyprenyl synthetase [Psychrobacter sp. PRwf-1]
          Length = 309

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 48  LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +   C+ L  +     A+ + A  E +H  +L+HDD+  +D   +RRG+PT
Sbjct: 26  AGGKRMRPLITLLCSRLCKDEQSKDAMHLAAITEMLHTATLVHDDV--IDESGMRRGRPT 83

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +D  TA++ G+ L+  AF ++   ++     + S     +     L      Q+  
Sbjct: 84  ANATWDNPTAVLVGDYLIARAFNLLVGFQSLPLLQLFSDGTCDIAEGEVL------QLQH 137

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +    ET    I   KT  L   A    AI+        +    FG++ G  FQ+ DD
Sbjct: 138 QHNPEATETDYMNIIDGKTSRLFMMATAGVAIL-QDKPEFMQPFSDFGQHFGNAFQIIDD 196

Query: 227 LLDCEEDLP 235
           +LD   D  
Sbjct: 197 VLDYSGDSE 205


>gi|332968796|gb|EGK07844.1| geranyltranstransferase [Psychrobacter sp. 1501(2011)]
          Length = 315

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 28/250 (11%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECA 62
              S  Q+    + T +D LL         +    L  A  YA+ G GK++R  +     
Sbjct: 7   NFESLSQQVIATLSTDIDTLLS------HAELPSPLKEACHYAMTGQGKRVRPLMAACAY 60

Query: 63  SLFNVN----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
                +                     R   A+E +H YSLIHDDLP MD+  +RRG+PT
Sbjct: 61  HTVIYSNTAVDSGAETLSDSVLTDNCRRAMLAVEFLHTYSLIHDDLPCMDDDDLRRGRPT 120

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--NIRSQLMLSLTHNIGLQGMLGGQM 164
            HI++DE TA++ G+ L T AFEI+++     +   + ++  +L+       + M+ GQM
Sbjct: 121 CHIKFDEATAMLTGDVLQTLAFEILTADIEGFQPISDEQAAKLLT-VFAPRARRMVSGQM 179

Query: 165 LDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           LD+  E   I + ++  I + KTGAL+  A   G + A AS  +   +  F  N+G+ FQ
Sbjct: 180 LDLNAENKEITQAELEAIHRDKTGALIEAAVLMGGVCAEASAEQLAAMTQFATNIGLAFQ 239

Query: 223 LADDLLDCEE 232
           + DD+LD   
Sbjct: 240 VQDDILDVTA 249


>gi|307352924|ref|YP_003893975.1| polyprenyl synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307156157|gb|ADN35537.1| Polyprenyl synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 321

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 19/237 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L   L++N++ IDT L+         M       L  A  + L  GGK++R  +    A+
Sbjct: 3   LEEYLEKNAELIDTRLE--------SMYGSLPGELDKASAHLLCAGGKRLRPSVTMLAAN 54

Query: 64  LFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +    +  + +    A+E  H ++L+HDD+  MD    RRG PTVH ++DE TAI+AG+ 
Sbjct: 55  IVEKGSSDSVIPAALALEVTHTFTLVHDDI--MDGDVARRGVPTVHTKWDEPTAILAGDV 112

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFM 179
           L   AFE+I+         + +  +L+ T       +  GQ  D+  E  D+    +   
Sbjct: 113 LYAEAFELITMADADPVAKVEAVAILART----CLEICRGQHEDMSFEKRDDVDPYEYLE 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +   KTG L   A   G I+A     +   L  +G   G+ FQ+ DD++D   D  K
Sbjct: 169 MVGQKTGKLYAAAAAIGGILAGGDARQVGALHDWGYLSGVAFQIQDDVIDLMADSEK 225


>gi|290955843|ref|YP_003487025.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
 gi|260645369|emb|CBG68455.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
          Length = 350

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 59  GGKAVRPALAVMSAEVTGAAPEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L+  A EI+    T   +  R+   ++      + G       + +
Sbjct: 117 KVHGPAQAILVGDALMVLANEILLELGT--VEAARATRRVTTATRALIDGQAQDISYEHR 174

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  AC  GA++  A  +  + L  +G +LG+ FQ  DDLL
Sbjct: 175 -ERVTVEECLEMEGNKTGALLACACSIGAVLGGADDHTADTLEKYGYHLGLAFQAVDDLL 233

Query: 229 DCEED 233
               D
Sbjct: 234 GIWGD 238


>gi|62959193|gb|AAY23704.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-25]
          Length = 145

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E    +    +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTTGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|256783790|ref|ZP_05522221.1| polyprenyl synthatase [Streptomyces lividans TK24]
          Length = 342

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 51  GGKAVRPALAVLSAEVTGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 108

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 109 KVHGPAQAILVGDALFALANEVLLELGTVEAG--RATRRLTKASRSLIDGQAQDISYEHR 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 167 DR-VSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLL 225

Query: 229 DCEED 233
               D
Sbjct: 226 GIWGD 230


>gi|291303388|ref|YP_003514666.1| trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM
           44728]
 gi|290572608|gb|ADD45573.1| Trans-hexaprenyltranstransferase [Stackebrandtia nassauensis DSM
           44728]
          Length = 322

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 24/237 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           ++  L + +    + I+  L +++    +         L  A  + L  GGK+ R  L  
Sbjct: 4   VDPELEASVSRRLEVIEKRLQEVIDSGDAF--------LTEAASHVLKAGGKRFRPMLSV 55

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A   + +    +     +E  H  +L HDD+  MD   +RRG P+ + ++    AI++
Sbjct: 56  TAAHFGDPDAHGVIESSLVMELTHLATLYHDDV--MDEAAMRRGAPSANSRWSNSIAILS 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQ- 176
           G+ L   A E+++           S+ +           ++ GQ+ +     E +D    
Sbjct: 114 GDYLFAVASELVAELG--------SETVREQART--FSRLVHGQIAETVGPPEGVDPVDW 163

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +   KTG+L+  A   GA  A A  +  + +  +GE +G+ FQL+DDLLD   D
Sbjct: 164 YLRVLTDKTGSLIATAARLGAQFAGAPTSVVDAVAEYGETIGVAFQLSDDLLDIASD 220


>gi|145590446|ref|YP_001152448.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282214|gb|ABP49796.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 334

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 17/235 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            +  + I+  L+  L            D    A+ Y L  GGK++R  L    A   +  
Sbjct: 9   AKYGQEIEKALERYLA-------IDLADDFHEAVLYQLKTGGKRLRPLLTLATAEAVSGR 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL   A +E IH YSLI+DD+  +D G +RRG PTV   + +  AI+ G        
Sbjct: 62  WEPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGMPTVRKAFGDNAAILIGIWYREAIE 119

Query: 129 EIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLDI----QDEFIDETQVFMIQ 181
           E +      L        ++        + +     G+        + + +       + 
Sbjct: 120 EAVLETPKPLVFAREVAKVIKAIDEGERLDILFECAGRSDPYFAKARWKEVTLDDYVKMV 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +KTG L+  A + G +      +  E    FG N GI FQ+ DD+LD   D  K
Sbjct: 180 SLKTGVLIAAAAKWGVLSVSDDGDLAEAAWNFGLNAGIAFQIIDDVLDIYGDPKK 234


>gi|16519830|ref|NP_443950.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
           NGR234]
 gi|2497460|sp|P55539|ISPA_RHISN RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Geranyltranstransferase
 gi|2182498|gb|AAB91752.1| probsble geranyltransferase protein IspA [Sinorhizobium fredii
           NGR234]
          Length = 332

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 74/235 (31%), Positives = 120/235 (51%), Gaps = 14/235 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            +Q  +KR++  L  LL       +      L++A+RYA L GGK+ R+ L     +L +
Sbjct: 36  WMQNGAKRVEQALARLLC-----AEDHGETELMAAMRYATLHGGKRTRALLCLAAGALAD 90

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+ G+ L  +
Sbjct: 91  TPAHILDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 150

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           AF  ++S      +  R  L+  L   +  +G  GGQ +D+    + ++  ++  + +MK
Sbjct: 151 AFLTLASLDAPGDN--RIALVRELAQAVSAEGAAGGQAMDLSLVGKHVELDRIVAMHRMK 208

Query: 185 TGALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADDLLDCEEDLP 235
            GAL+  +   GA+ A A           L  +    G+  Q+ DD+LD   D  
Sbjct: 209 CGALVRASVRMGALCAIAEDAADATLYCALDHYSACFGLALQVVDDILDATADTA 263


>gi|116495752|ref|YP_807486.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
 gi|239630159|ref|ZP_04673190.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|116105902|gb|ABJ71044.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
 gi|239527771|gb|EEQ66772.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
          Length = 320

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 10/220 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           L   L      + T +     + +     GGK +R       +   +V+    + + AAI
Sbjct: 12  LASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAAI 71

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D    RR + T+  Q+   TA+ AG+ L    F+++S   + L 
Sbjct: 72  ETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSL- 128

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
              RS    S +    L+G L  QM       I           KTG L   +C  GA  
Sbjct: 129 ---RSIQQDSGSMEKILKGEL-DQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYE 184

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           + +S    +     G N+GI FQL DD+LD   D   L K
Sbjct: 185 SGSSPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGK 224


>gi|308275697|gb|ADO25596.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
           pseudotuberculosis I19]
          Length = 339

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 36/244 (14%)

Query: 2   NGGLPSKLQENSKRIDTIL-------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR 54
           N  L   +     R++ +L       +D +++   H+                 GGK+ R
Sbjct: 20  NPALNEDISAGMTRVEELLQKELCVGEDFIVEKVKHLAN--------------AGGKRFR 65

Query: 55  SFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
                  +   +       ++    +E  H  +L HDD+  MD    RRG  + + +++ 
Sbjct: 66  PMFALLASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVESANARWNN 123

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEF 171
             AI+AG+ LL +   +++   T          +   +   G   ++ GQM +     E 
Sbjct: 124 SVAILAGDILLAHVSRLMADLGTD--------TVRHFSETFG--DLVTGQMRETIGVGEG 173

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                   + + KTG L+  A   GA+ + A+ +  E LR +G  +G++FQ+ DD++D  
Sbjct: 174 DPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIF 233

Query: 232 EDLP 235
            D  
Sbjct: 234 SDSE 237


>gi|2497459|sp|Q45220|ISPA_BRAJA RecName: Full=Probable farnesyl diphosphate synthase; Short=FPP
           synthase; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Geranyltranstransferase
 gi|529967|gb|AAC28894.1| putative dimethylallyltranstransferase; ORF6; similar to E. coli
           dimethylallyltranstransferase, Swiss-Prot Accession
           Number P22939 (Fujisaki et al., J. Biochem.
           108:995-1000(1990) [Bradyrhizobium japonicum USDA 110]
          Length = 332

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 14/235 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            +Q+ +KR++  L  LL       +      L++A+RYA L GGK+ R+ L     +L +
Sbjct: 36  WMQDGAKRVEEALARLLC-----AEDDGETELMAAMRYATLHGGKRTRALLCLAAGALAD 90

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   VGAAIE +H  +L+HDDLP+MD+  +RRG PTVH+++ E TAI+ G+ L  +
Sbjct: 91  TPAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAH 150

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           AF  ++S        I    +  L   +  +G  GGQ +D+    + ++  ++  + +MK
Sbjct: 151 AFLTLASLNAPGDSPIAL--VRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMK 208

Query: 185 TGALMCFACESGAIMAHASQNEKERLRC----FGENLGIIFQLADDLLDCEEDLP 235
           +GAL+  +   GA+ A         L C    +    G+  Q+ DD+LD   D  
Sbjct: 209 SGALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTA 263


>gi|220928949|ref|YP_002505858.1| polyprenyl synthetase [Clostridium cellulolyticum H10]
 gi|219999277|gb|ACL75878.1| Polyprenyl synthetase [Clostridium cellulolyticum H10]
          Length = 318

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 16/223 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           +R++  ++ +  +   +  T  N  L+ AI   +  GGK++R  +V   +    +     
Sbjct: 6   QRLNGDIEKV-EENLRNSVTSKNKLLVKAIADTVGAGGKRLRPAMVIVSSYFGKIRQENL 64

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +++ +AIE +H  +LIHDD+  +DN   RR   TV+ +Y    AI  G+ L T A  +++
Sbjct: 65  IQLASAIELLHTATLIHDDV--LDNSPYRRNNETVYKKYGTDMAIYCGDFLYTKALLMLA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM 189
                 K  I ++ + +         +  G++   +D++   +           KT  L 
Sbjct: 123 DIVPANKLTIAARAVKT---------ICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLF 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +C  GA+ A  +      L   G   G++FQL DD  D + 
Sbjct: 174 SASCALGALCAKCNPRITNSLSKLGFYYGVMFQLIDDFRDYKS 216


>gi|317128581|ref|YP_004094863.1| heptaprenyl diphosphate synthase component II [Bacillus
           cellulosilyticus DSM 2522]
 gi|315473529|gb|ADU30132.1| heptaprenyl diphosphate synthase component II [Bacillus
           cellulosilyticus DSM 2522]
          Length = 323

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 13/221 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           ++ +  +   ++   H   L  A  + L  GGK+IR   V   A     N      +G A
Sbjct: 14  INKIEKEIELNIDANHP-ILQEASSHLLKAGGKRIRPVFVLLSAQFGEYNIEEIKNIGVA 72

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E IH  SL+H     +D+  +RRGK T+  ++D   A+  G+ +   A EI +   T  
Sbjct: 73  LEMIHMASLVH--DDVVDDADLRRGKKTIKSKWDNRVAMYTGDYIFAKAVEIATYYDTPD 130

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                   +LS        G +  Q+ D  D   +    F   K KT  L+  +C+ GAI
Sbjct: 131 -----IHKILSHALVEMCIGEVE-QIRDQYDWNQNLRMYFRRIKRKTALLIAISCQLGAI 184

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            + A +     L  FG N+G+ FQ+ DD+LD      +L K
Sbjct: 185 ASGAPEAHVRALSRFGYNVGMAFQITDDILDFVGTEKELGK 225


>gi|242278239|ref|YP_002990368.1| dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638]
 gi|242121133|gb|ACS78829.1| Dimethylallyltranstransferase [Desulfovibrio salexigens DSM 2638]
          Length = 322

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 18/236 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L +  +     I+  LD+   +    ++      L       L  GK+IR  L    A 
Sbjct: 3   ELLAYFKNELPLINGFLDEETSKLEGLVKDVARHVL-------LAPGKRIRPVLTILSAR 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                      +  ++E +H  +L+HDD+  +D+  +RRG    H+ +     I+AG+ L
Sbjct: 56  GLGYGKDDIYPLAGSLELLHAATLLHDDI--LDDADLRRGVEASHLVFGTTETILAGDVL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L  A +I +        ++ +  +++      L      ++  I +  ++      I   
Sbjct: 114 LALANKIGADYGKPRISSVLASGIMATVEGEIL------EIAHISEPLMNRDTYMDIIIG 167

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  GAI+A   +  ++ +  FG N+GI FQL DD LD E    D  K
Sbjct: 168 KTARLIETSCRLGAILASDDRAMEDAVGNFGLNMGIAFQLVDDALDYESPSDDTGK 223


>gi|77463836|ref|YP_353340.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
 gi|85683255|sp|P54976|CRTE_RHOS4 RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; AltName: Full=Farnesyltranstransferase
 gi|77388254|gb|ABA79439.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides 2.4.1]
          Length = 288

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 9/200 (4%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHD 90
           ++   +L +A+ YA+  GG +IR  L+   A+    +          A+E IHC SL+HD
Sbjct: 21  SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++             +    
Sbjct: 81  DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALA 140

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G+  GQ      E   +  +    + KTGAL   A + GAI A     E E  
Sbjct: 141 VRTGMPMGICAGQGW----ESESQINLSAYHRAKTGALFIAATQMGAIAAGY---EAEPW 193

Query: 211 RCFGENLGIIFQLADDLLDC 230
              G  +G  FQ+ADDL D 
Sbjct: 194 EELGARIGEAFQVADDLRDA 213


>gi|194227087|ref|XP_001496103.2| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 1
           [Equus caballus]
          Length = 379

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N +H  +         +    E IH  SL+H
Sbjct: 84  ELKEMSEYYFDGKGKAFRPIIVVLMARACNSHHDNSRDVQASQRSIALIAEMIHTASLVH 143

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 144 DDV--IDDARSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 201

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 202 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 255

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 256 AYQYGKNVGIAFQLIDDVLDFTS 278


>gi|302523893|ref|ZP_07276235.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
           AA4]
 gi|302432788|gb|EFL04604.1| heptaprenyl diphosphate synthase component II [Streptomyces sp.
           AA4]
          Length = 347

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 18/230 (7%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
            + I + L D+       +++       +A+     GGK+ R       A          
Sbjct: 33  LRAIASGLADVETMLRDVVKSDVPAVHDAALHLVEAGGKRFRPLFTLLSAQFGPKQGEQV 92

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L   AA+E +H  +L HDD+  MD   +RRG  +V+ ++D   AI+ G+ L  +A  +++
Sbjct: 93  LVAAAAVELVHLATLYHDDV--MDEATMRRGAESVNSRWDNTVAILTGDYLFAHASRLVA 150

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALM 189
              T     I                ++ GQM +       +        +   KTG+L+
Sbjct: 151 DLGTDAARII----------AETFGELVSGQMRETVGPGPGDDPVEHYLTVIAQKTGSLI 200

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             +   G +M+ A++   + LR FG+ +G  FQ++DD++D      +L K
Sbjct: 201 ATSGRFGGMMSGAAEEHIQALRRFGDIIGAAFQISDDVIDIASPSVELGK 250


>gi|288818513|ref|YP_003432861.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6]
 gi|288787913|dbj|BAI69660.1| octoprenyl-diphosphate synthase [Hydrogenobacter thermophilus TK-6]
 gi|308752103|gb|ADO45586.1| Polyprenyl synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 307

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 16/201 (7%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +L    Y +  GGK++R  L          +    L +   IE IH  SL+HDD+  +D 
Sbjct: 26  ILEVGSYIISSGGKRMRPVLSLLTCKALGGDERKVLPLAVGIEYIHVASLLHDDV--VDG 83

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG+ + ++ +     ++ G+ +   A  + S         I S+          + 
Sbjct: 84  ADRRRGRLSANLVFGNDLCVLTGDYMYAKALWLYSRYGDIKSIEIVSR---------AVM 134

Query: 158 GMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            M  GQ+L+++   + ID+   F I   KTG L   +   GA+MA   + + ER    G 
Sbjct: 135 DMAQGQVLELKSIGDIIDQETYFSIIDRKTGVLFGASMAVGALMAG--REDYERFYQMGL 192

Query: 216 NLGIIFQLADDLLDCEEDLPK 236
            +G  FQL DD LD      K
Sbjct: 193 KVGRAFQLVDDALDYSGSEEK 213


>gi|333025098|ref|ZP_08453162.1| putative heptaprenyl diphosphate synthase component II
           [Streptomyces sp. Tu6071]
 gi|332744950|gb|EGJ75391.1| putative heptaprenyl diphosphate synthase component II
           [Streptomyces sp. Tu6071]
          Length = 326

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L D        +         +A    L GGK+ R  LV   
Sbjct: 3   DQALEADVQAGLTAVEEGLLDATKSGVPFITE-------AAQHLVLAGGKRFRPLLVMLA 55

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +     +E  H  +L HDD+  MD   +RRG  + + ++D   A++ G+
Sbjct: 56  AQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATVRRGVDSANARWDNSVAVLTGD 113

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L + A +I++    +                   + ++ GQ+L+    +D         
Sbjct: 114 FLFSRASQILAGLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVDHYL 163

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  A   GA+M+ A     E L  +GE LG+ FQLADD+LD   D
Sbjct: 164 DVLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERLGVAFQLADDVLDIASD 218


>gi|326203183|ref|ZP_08193049.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986829|gb|EGD47659.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 318

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 102/223 (45%), Gaps = 16/223 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           +R++  ++ +     +++ T  N  L+ AI   +  GGK++R  +V   +    +     
Sbjct: 6   QRLNNDIEKVEENLRTNV-TSKNQLLVKAIADTVGAGGKRLRPAMVIASSYFGKIRQDRL 64

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +++ +AIE +H  +L+HDD+  +D    RR + TV+ +Y    AI  G+ L T A  +++
Sbjct: 65  IKLASAIELLHTATLVHDDV--LDYSPFRRNRETVYKKYGTDMAIYCGDFLYTKALLMLA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALM 189
                  D + ++ +      +  + +  G++   +D++   +           KT  L 
Sbjct: 123 -------DIVPAKHLTIAAKAV--KTICEGEVDQYRDKYVMNLSVPSYLKRISRKTAVLF 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +C  GA+ A  + +    L   G   G++FQ+ DD  D + 
Sbjct: 174 GASCALGALCAKCNHSITNSLSKLGFYYGVMFQMIDDYRDYKS 216


>gi|222147711|ref|YP_002548668.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4]
 gi|221734699|gb|ACM35662.1| octaprenyl-diphosphate synthase [Agrobacterium vitis S4]
          Length = 338

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A++F       +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASAAMFGYEGEGHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS   ++  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVEVGS-----LEALDVLSTAASVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A   +  +  L+ +G NLG+ FQL DD L
Sbjct: 169 NMETTEDDYQAVIRAKTAALFAAAAEVGPIVAGTDKAARNALKSYGMNLGLAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGKVADLGK 239


>gi|302868180|ref|YP_003836817.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302571039|gb|ADL47241.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 339

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 8/211 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
            LL         +  D+L + +RYALL  GK +R  +    A     +    L      E
Sbjct: 23  RLLRAELGRRWPETPDQLDAIVRYALLPAGKMLRPMMTLHAAEAVGGSPRDVLAAALGTE 82

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +L+HDD+  +D   +RRG+P V + Y    AI+AG+ L+ +AF+ +      +  
Sbjct: 83  YLHVATLVHDDI--IDADTLRRGRPAVPVAYGIPGAIVAGDHLIFHAFQAMVESGRAVPA 140

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGA 197
                           Q +  GQ L+ +   D          + ++KTG+L    C  GA
Sbjct: 141 ASVVA--AVTALAEAGQDLCRGQALEARLVGDLDAGARWYPEMIRLKTGSLFRAVCHIGA 198

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           ++  A       L  +GE++G  FQ+ DDLL
Sbjct: 199 LLGGADPLVASGLARYGEHVGTAFQIRDDLL 229


>gi|6690726|gb|AAF24294.1| CrtE [Rhodobacter sphaeroides]
          Length = 288

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 93/200 (46%), Gaps = 9/200 (4%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHL-TALRVGAAIECIHCYSLIHD 90
           ++   +L +A+ YA+  GG +IR  L+   A+    +    +     A+E IHC SL+HD
Sbjct: 21  SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPVLSDAAAVALELIHCASLVHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++             +    
Sbjct: 81  DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALA 140

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G+  GQ      E   +  +    + KTGAL   A + GAI A     E E  
Sbjct: 141 VRTGMPMGICAGQGW----ESESQINLSAYHRAKTGALFIAATQMGAIAAGY---EAEPW 193

Query: 211 RCFGENLGIIFQLADDLLDC 230
              G  +G  FQ+ADDL D 
Sbjct: 194 EELGARIGEAFQVADDLRDA 213


>gi|312869707|ref|ZP_07729854.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3]
 gi|311094756|gb|EFQ53053.1| polyprenyl synthetase [Lactobacillus oris PB013-T2-3]
          Length = 327

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 12/231 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---N 66
            +    I T L  +       +  Q+ +   + +  A  GGK +R  L+   + +F   +
Sbjct: 5   WQTYPLISTQLKAVNQCIQERIDCQNAELHTALLTMANNGGKYLRPALLLLTSQIFTPSS 64

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    +++ A+IE +H  +LIHDD+  +D+   RRG  ++  ++ + TA+ AG+ L T 
Sbjct: 65  RNDERLIKLAASIEVLHMATLIHDDI--IDDSPERRGAVSIQARFGKDTAVYAGDLLFTV 122

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
            F+++               + +      L G L GQM    +            + KT 
Sbjct: 123 FFDLLLEAIPASP----YLQVNARAMRQILDGEL-GQMDQRFNLQQTLDDYLANVRGKTA 177

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           AL   A + GA  A A+  +      FG+ LGI FQ+ DD+LD      KK
Sbjct: 178 ALFKLAAQEGAYFAAATTEQVASAAAFGQQLGIAFQMLDDILDYTG--GKK 226


>gi|309753137|gb|ADO85593.1| PenB [Streptomyces exfoliatus]
          Length = 337

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A         AL    A+E +H +SL+HDDL  MD    RR + TV  
Sbjct: 53  GKAVRPALALLSAEAVGAPPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   +AI+ G+ LL  A E++              L  +  H      ++ GQ+ D+  
Sbjct: 111 LWGSSSAILTGDALLALAQEVLLDTGLPTAAPAARLLARTTRH------LIRGQVQDLAF 164

Query: 170 EFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E      V     +   KTGAL+  +   GA++A A +   + L  +G+ +G+ FQL DD
Sbjct: 165 EQRSHVTVEECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224

Query: 227 LLDCEED 233
           +L    D
Sbjct: 225 VLGIWGD 231


>gi|74100796|gb|AAZ99642.1| isoprenyl diphosphate synthase [Streptomyces sp. Tu4128]
          Length = 336

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++   + LL  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALEADVQAGLVAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG  + ++++D   A++ G
Sbjct: 65  SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVASANVRWDNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A +I++    +                +  + ++ GQ+L+    QD        
Sbjct: 123 DFLFARASQILADLGPEAV----------RVQALAFERLVTGQILETAGPQDGRDPVDHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +C  GA+M+ A +     L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LDVLGGKTGSLVAVSCRFGAMMSGADETVVHVLTQYGERLGVAFQLADDVLDIASD 228


>gi|313631736|gb|EFR98936.1| heptaprenyl diphosphate synthase component 2 [Listeria seeligeri
           FSL N1-067]
          Length = 291

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 11/191 (5%)

Query: 48  LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK +R       A    + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT
Sbjct: 10  AGGKLLRPAFALLSAQAGPDFDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPT 67

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQML 165
           +H +Y    A+  G+ L    F+I+S+  + +      + +   + NI    M    QM 
Sbjct: 68  IHSKYGRNYAVYTGDYLFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMR 121

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                 +   +       KT  L   +C SGA  + AS+    +    G  LG+ FQ+ D
Sbjct: 122 TSYKMDVTVREYLTRISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIID 181

Query: 226 DLLDCEE-DLP 235
           D+LD    D  
Sbjct: 182 DVLDYTSTDEG 192


>gi|304383744|ref|ZP_07366203.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973]
 gi|304335268|gb|EFM01539.1| octaprenyl-diphosphate synthase [Prevotella marshii DSM 16973]
          Length = 327

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 15/233 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYA-LLGGKKIRSFLV 58
           M   L S +Q   + I T L   + +  + ++  H+D LLS A+ +    GGK++R  L+
Sbjct: 1   MRMDLLSLIQ---QPIQTDLATFISRFNASLE--HSDGLLSMALEHIKQRGGKRMRPILI 55

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A  +      A      +E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++
Sbjct: 56  LLLAKNYGTITDAAHHAAVGLELLHTASLVHDDV--VDESSERRGQSSVNATYNNKVAVL 113

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ +L+ A   ++  ++    N  +QL  +L+    L      Q+ +IQ+E I E   +
Sbjct: 114 VGDYILSTALLHVAYTQSDYIINSLAQLGRTLSKGEIL------QLTNIQNEEISEEVYY 167

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            + + KT AL        A  A AS    E  R FG +LG IFQ+ DD+ D  
Sbjct: 168 QVIEQKTAALFETCAAVAAKAAGASNESIEAARKFGRDLGTIFQIRDDIFDYY 220


>gi|154494276|ref|ZP_02033596.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC
           43184]
 gi|154085960|gb|EDN85005.1| hypothetical protein PARMER_03627 [Parabacteroides merdae ATCC
           43184]
          Length = 324

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 12/226 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           + +         + A+ ++++ N RL SAI   L   GK +R  LV   A          
Sbjct: 9   QPVAVEFKRFNDEFAASLRSETN-RLQSAIDQILNASGKHVRPLLVLLTAKACGQVTDNT 67

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +     +E +H  +LIHDD+  +D    RRG P+++  +D   +++ G+ +L+ A     
Sbjct: 68  INSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL---- 121

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
             ++    N++   ++S       +G +  Q+   ++  IDE+    + + KT  L+   
Sbjct: 122 -IRSIQTGNLQIIGIVSNLGRDLSEGEIK-QLETAEESIIDESCYMQVIRKKTAMLLSAC 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
            E G+I A AS    E+ R FGE LG  FQ+ DD+ D   E ++ K
Sbjct: 180 AEIGSISAGASGEMVEKCREFGEYLGYCFQIKDDIFDYFKEANIGK 225


>gi|213964989|ref|ZP_03393188.1| bifunctional short chain isoprenyl diphosphate synthase
           [Corynebacterium amycolatum SK46]
 gi|213952525|gb|EEB63908.1| bifunctional short chain isoprenyl diphosphate synthase
           [Corynebacterium amycolatum SK46]
          Length = 351

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 39/245 (15%)

Query: 1   MNGGLPSKLQENSKRIDTIL-------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKI 53
           ++  L + + E  ++ + +L       +D L +  SH+              A  GGK+ 
Sbjct: 28  VDEALEATITEGMRKSEDLLITELGRGEDFLAERVSHL--------------AQAGGKRF 73

Query: 54  RSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           R       A           +     +E  H  +L HDD+  MD    RRG P+ + ++D
Sbjct: 74  RPMFTMLAAQFGETPESDKVITAATVLELTHLATLYHDDV--MDEADKRRGVPSANSRWD 131

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-- 170
              AI+AG+ L   A  +++           S+ +       G+  ++ GQM +  ++  
Sbjct: 132 NTVAILAGDYLFAVASRLLAELG--------SESVAHFAETFGV--LVTGQMRECLNDLD 181

Query: 171 -FIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             I+E   +   +   KTG L+  A   GA  A AS +    LR +GE +GI+FQ+ DD+
Sbjct: 182 LPIEERIERYLKVIAEKTGVLIASAGYLGAYHAGASADISNALRRYGELIGIVFQIVDDI 241

Query: 228 LDCEE 232
           +D   
Sbjct: 242 IDISS 246


>gi|329572077|gb|EGG53747.1| polyprenyl synthetase [Enterococcus faecalis TX1467]
          Length = 305

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R       +      +   A  + A+IE +H  +L+HDD+  +D    RRG PT+
Sbjct: 23  GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI--VDEADTRRGLPTL 80

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++   TA+  G+ L    F+++S   + LK    S  + S +    L G L GQM + 
Sbjct: 81  RSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSMEKVLTGEL-GQMDNR 135

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  +   Q       KT  L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+
Sbjct: 136 YNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDI 195

Query: 228 LDCEE 232
           LD  +
Sbjct: 196 LDYTQ 200


>gi|327537714|gb|EGF24422.1| Trans-hexaprenyltranstransferase [Rhodopirellula baltica WH47]
          Length = 326

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 31/238 (13%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E+   +D  L   L            + L+  +R+   LGGK++R  L+    +  + + 
Sbjct: 2   ESLAAVDARLHRELQSRY--------EALVPVLRHGTQLGGKRLRPALLLLSGAAMHADR 53

Query: 70  --------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
                            + +   +E +H  +LIHDD+  +D    RR  PT++ ++++ T
Sbjct: 54  TSKNPLTTEELATTEDHIVMATVVEMVHTATLIHDDV--LDKAATRRHVPTINARWNDDT 111

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           +I+ G+ L   +F + ++  + L   +  Q    +            Q+L      IDE 
Sbjct: 112 SILLGDYLFAQSFYLAATLPSTLACRLVGQAAQKVCEGE------LRQVLGRDWLDIDEE 165

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               I + KT  L   +C+ GA ++   +++ E    FG +LGI FQ+ADD LD   D
Sbjct: 166 TYLDIIRGKTAELTRVSCQIGADLSGGDESQVEAFARFGNDLGIAFQIADDFLDLWGD 223


>gi|126462671|ref|YP_001043785.1| polyprenyl synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104335|gb|ABN77013.1| farnesyl-diphosphate synthase [Rhodobacter sphaeroides ATCC 17029]
          Length = 292

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 9/200 (4%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHD 90
           ++   +L +A+ YA+  GG +IR  L+   A+    +          A+E IHC SL+HD
Sbjct: 25  SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHD 84

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++             +    
Sbjct: 85  DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALA 144

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G+  GQ      E   +  +    + KTGAL   A + GAI A     E E  
Sbjct: 145 VRTGMPMGICAGQGW----ESESQINLSAYHRAKTGALFIAATQMGAIAAGY---EAEPW 197

Query: 211 RCFGENLGIIFQLADDLLDC 230
              G  +G  FQ+ADDL D 
Sbjct: 198 EELGARIGEAFQVADDLRDA 217


>gi|239929586|ref|ZP_04686539.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
 gi|291437911|ref|ZP_06577301.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
 gi|291340806|gb|EFE67762.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
          Length = 336

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++   + LL  T S +       +  A ++ +  GGK+ R  LV  
Sbjct: 13  DQALEADVQAGLTAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGKRFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG  + + ++D   A++ G
Sbjct: 65  SAQFGDPYAPGVVPSAVVVELTHLATLYHDDV--MDEAEVRRGVASANARWDNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L + A  I++    +                   + ++ GQ+L+    QD        
Sbjct: 123 DFLFSRASHILADLGPEAV----------RVQAEAFERLVTGQILETAGPQDGRDPVDHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +C  GA+M+   +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LDVLGGKTGSLVAVSCRFGAMMSGTDETVVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|91077592|ref|XP_973319.1| PREDICTED: similar to AGAP000591-PA [Tribolium castaneum]
          Length = 446

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 18/240 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
           G LP    +    ++  L D+ +     ++ + + D L     Y   G GK IR  +   
Sbjct: 114 GSLPEYQVDPYHLLEDDLKDVYVYIRDALRRSTYQDDLYEIATYYFDGHGKAIRPMVAIL 173

Query: 61  CASLFNVNH--------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
            A   N +          +   V    E IH  SL+HDD+  +D    RRGKP+V++ ++
Sbjct: 174 MARAINYHIYKEKSGLLTSQREVAMISEMIHTASLVHDDV--IDQSDFRRGKPSVNVMWN 231

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
                +AG+ +L  A  +I+  K      + SQ++  L     +      Q+   + E  
Sbjct: 232 HKKVTMAGDFILAVASIMIARLKNNDVTLVLSQVVSDLVQGEFM------QLGSKETENE 285

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                      KT +L+  + +S  ++A A +   +    +G NLG+ FQL DDLLD   
Sbjct: 286 RFAHYLTKTYRKTASLIANSVKSVTMLAGADEQLSDISYQYGRNLGLAFQLVDDLLDFVS 345


>gi|73948851|ref|XP_849908.1| PREDICTED: similar to trans-prenyltransferase [Canis familiaris]
          Length = 365

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 70  ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHSNSRDVQASQRSIALIAEMIHTASLVH 129

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 130 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASMALARIGNTTVISILTQVIED 187

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 188 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 241

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 242 AYQYGKNVGIAFQLIDDVLDFTS 264


>gi|116671675|ref|YP_832608.1| trans-hexaprenyltranstransferase [Arthrobacter sp. FB24]
 gi|116611784|gb|ABK04508.1| Trans-hexaprenyltranstransferase [Arthrobacter sp. FB24]
          Length = 367

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 22/234 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   +  N  R++  L + +  +   +    +  L+ A      GGK+IR  L   C
Sbjct: 45  DPELGPAITTNLARVEKKLREAIANSDP-LADATSRHLVEA------GGKRIRPLLALLC 97

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L + +    ++    +E  H  +L HDD+  MD+   RRG PT H  +    A++ G+
Sbjct: 98  AHLGDASRPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAVLTGD 155

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            +   A  ++S   +      R+  + + T       +  GQ+ +      DE       
Sbjct: 156 LIFARASILVSELGS------RALGIQARTFER----LCLGQLHETVGPRPDEDPVEHYL 205

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   KTG+L+  + + GAI A A +  +  L  +GE +G+ FQLADD++D   
Sbjct: 206 SVIADKTGSLVAASGQLGAIFAGADEAYEPLLVEYGEKIGVAFQLADDVIDVTG 259


>gi|225868943|ref|YP_002744891.1| geranyltranstransferase [Streptococcus equi subsp. zooepidemicus]
 gi|225702219|emb|CAW99956.1| putative geranyltranstransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 289

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 7/172 (4%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                + AAIE IH  SLIHDDLP+MDN   RRG+ T H Q+DE TAI+AG+ L    F 
Sbjct: 58  DAHYAIAAAIEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFDEATAILAGDSLFLDPFA 117

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +I+     L  ++  QL+   +   G  GM+GGQ+LD++ E   +D  ++  I   KTG 
Sbjct: 118 LIA--GADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEQQLLDIQELSDIHANKTGK 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+     +  I+A  S +    L   G  +G  FQ+ DD+LD      +L K
Sbjct: 176 LLTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDVTASFDELGK 227


>gi|62959177|gb|AAY23696.1| farnesyl diphosphate synthase [Bacillus sp. JL-34]
 gi|62959197|gb|AAY23706.1| farnesyl diphosphate synthase [Bacillus sp. JL-29]
 gi|73811209|gb|AAY23723.1| farnesyl diphosphate synthase [Citromicrobium bathyomarinum JL354]
          Length = 145

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E    +    +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|114707337|ref|ZP_01440234.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Fulvimarina pelagi HTCC2506]
 gi|114537218|gb|EAU40345.1| geranyltranstransferase (farnesyl-diphosphate synthase)
           [Fulvimarina pelagi HTCC2506]
          Length = 296

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 94/234 (40%), Positives = 138/234 (58%), Gaps = 3/234 (1%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECAS 63
               L + ++ ++  L ++L      +     +RLL+A+R+  L GGK++R FL+ E A 
Sbjct: 2   FEQSLAQTAELVEGRLSEIL-SGHDRVARGAPERLLAAMRHGTLGGGKRLRPFLLIESAR 60

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +F +     L +  A+E IHCYSL+HDDLP+MD+  +RRG+PTVH  YD+ TAI+AG+ L
Sbjct: 61  IFGIQDDAVLDIACALEAIHCYSLVHDDLPAMDDDDLRRGRPTVHKAYDDATAILAGDSL 120

Query: 124 LTYAFEIISSP-KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LT AF +++   K   +  +R   +LS     G         L  +   + E ++  +Q 
Sbjct: 121 LTLAFGLVAGASKIPPEARVRIAALLSADAGAGGMAGGQALDLAAEQSALSEDEIARMQA 180

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           MKTGAL+ FACE GAI A AS  ++ RLR FGE +G+ FQLADDLLD   D  +
Sbjct: 181 MKTGALIAFACEGGAIAAAASSEDQRRLRRFGEIIGLAFQLADDLLDETADAAQ 234


>gi|82659078|gb|ABB88703.1| geranyl pyrophosphate synthase [Solanum lycopersicum]
          Length = 415

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 28/230 (12%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALR----- 74
           LL      M      +L SA  Y   LG  GK+ R  ++   A+  NV    +       
Sbjct: 87  LLTNRLRSMVVAEVPKLASAAEYFFKLGVEGKRFRPTVLLLMATALNVQIPRSAPQVDVD 146

Query: 75  ------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       +    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ 
Sbjct: 147 SFSGDLRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDF 204

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL+ A   ++S K     N     +L+      + G    QM    DE            
Sbjct: 205 LLSRACVALASLK-----NTEVVCLLATVVEHLVTGETM-QMTTSSDERCSMEYYMQKTY 258

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  +C++ A++A  S         +G+NLG+ FQL DD+LD   
Sbjct: 259 YKTASLISNSCKAIALLAGHSAEVSVLAFDYGKNLGLAFQLIDDVLDFTG 308


>gi|94497263|ref|ZP_01303835.1| Farnesyltranstransferase [Sphingomonas sp. SKA58]
 gi|94423368|gb|EAT08397.1| Farnesyltranstransferase [Sphingomonas sp. SKA58]
          Length = 378

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA L         ++ AA+E IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 97  GGKRLRPMLTLACADLVGYAGARHYKLAAAVEFIHTATLLHDDV--VDGSGMRRGRKTAN 154

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +    +++ G+ L + +FE++   ++     ++   +LS    +  +G +  Q+   +
Sbjct: 155 IIWGNSASVLVGDFLFSRSFELMVEAES-----LKVLKILSGASAVIAEGEVN-QLTAQR 208

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E Q   I   KT AL   AC   A++A  S+ E++ L  +G NLGI FQL DD +
Sbjct: 209 KIDTSEEQYLDIIGAKTAALFAAACRISAVVADRSEAEEQALDVYGRNLGIAFQLIDDAI 268

Query: 229 DCEEDLP 235
           D E D  
Sbjct: 269 DYESDEA 275


>gi|150017812|ref|YP_001310066.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904277|gb|ABR35110.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 275

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)

Query: 49  GGKKIRSFLVTECASLFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            GK +R  L+   A   N        +  + +  AIE IH  SL+HDD+  +DN   RRG
Sbjct: 45  PGKYLRPSLIILSAKAINPEMTIDERMKLINLCVAIELIHSASLVHDDI--IDNDLFRRG 102

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           + T++  Y    A++AG+     AF I+    T   + I +Q++         + M   +
Sbjct: 103 QKTLNNIYGRKIAVLAGDAFYAKAFSILLKLPTNDAEQIITQVI---------EKMCVAE 153

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   Q+  I +   F I + KT + M   C+ GA   +A + E E L  +G NLG+++Q+
Sbjct: 154 IEQAQNHEITKQDYFNIIEGKTASFMAACCKLGAKTVNAKEEEIEALENYGLNLGMLYQI 213

Query: 224 ADDLLD 229
            DD  D
Sbjct: 214 IDDCTD 219


>gi|332521667|ref|ZP_08398120.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332042756|gb|EGI78956.1| Polyprenyl synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 300

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 11/190 (5%)

Query: 44  RYAL-LGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
            Y +   GK++R   V   A +           R  + IE IH  +L+HDD+  +D+   
Sbjct: 13  HYIVNRKGKQMRPMFVFLVAKMVSNGEVKERTYRGASVIELIHTATLVHDDV--VDDSNK 70

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  +++  +    A++ G+ LL+    ++ S   +  D ++   ++S+      +G L
Sbjct: 71  RRGFFSINALWKNKIAVLIGDYLLSKG--LLLSIDNEDFDLLK---IISVAVREMSEGEL 125

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             Q+   +   I ET  + I + KT  L+   C  GA     +  E E +R FGE +G+ 
Sbjct: 126 L-QIEKARKLDITETIYYEIIRQKTATLIAACCSLGAASVKPNTLEVETMRKFGELIGMA 184

Query: 221 FQLADDLLDC 230
           FQ+ DDL D 
Sbjct: 185 FQIKDDLFDY 194


>gi|312910738|ref|ZP_07769577.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
 gi|311289001|gb|EFQ67557.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
          Length = 305

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|293389766|ref|ZP_06634208.1| polyprenyl synthetase [Enterococcus faecalis S613]
 gi|291080924|gb|EFE17887.1| polyprenyl synthetase [Enterococcus faecalis S613]
          Length = 305

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDFLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
          Length = 147

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 2/147 (1%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDDLP +DN   RRGKPT H  Y E  A++ G+ LL+ +FE I++    +  
Sbjct: 1   MIHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKGVSK 60

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAI 198
           +   +++  L  ++G +G++ GQ++DI  E  D     +  I   KT  L+  +   GAI
Sbjct: 61  DRIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIGAI 120

Query: 199 MAHASQNEKERLRCFGENLGIIFQLAD 225
           M   S  + E+LR F  ++G++FQ+ D
Sbjct: 121 MGGGSDQQIEKLRKFARSIGLLFQVVD 147


>gi|191639239|ref|YP_001988405.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei
           BL23]
 gi|190713541|emb|CAQ67547.1| Trans-hexaprenyltranstransferase, component II [Lactobacillus casei
           BL23]
 gi|327383318|gb|AEA54794.1| Polyprenyl synthetase [Lactobacillus casei LC2W]
 gi|327386501|gb|AEA57975.1| Polyprenyl synthetase [Lactobacillus casei BD-II]
          Length = 325

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 10/220 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           L   L      + T +     + +     GGK +R       +   +V+    + + AAI
Sbjct: 17  LASALAMIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDVDREKMIALAAAI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D    RR + T+  Q+   TA+ AG+ L    F+++S   + L 
Sbjct: 77  ETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLSHYASSL- 133

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
              RS    S +    L+G L  QM       I           KTG L   +C  GA  
Sbjct: 134 ---RSIQQDSGSMEKILKGEL-DQMATRYQTKITIDDYLKQVSGKTGQLFALSCFIGAYE 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           + +S    +     G N+GI FQL DD+LD   D   L K
Sbjct: 190 SGSSPTFAKNAEKIGMNIGIAFQLLDDILDYTSDDDTLGK 229


>gi|307269989|ref|ZP_07551314.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
 gi|307272595|ref|ZP_07553847.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
 gi|306510733|gb|EFM79751.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
 gi|306513654|gb|EFM82261.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
 gi|315025798|gb|EFT37730.1| polyprenyl synthetase [Enterococcus faecalis TX2137]
 gi|315154679|gb|EFT98695.1| polyprenyl synthetase [Enterococcus faecalis TX0043]
 gi|315158962|gb|EFU02979.1| polyprenyl synthetase [Enterococcus faecalis TX0312]
 gi|315167121|gb|EFU11138.1| polyprenyl synthetase [Enterococcus faecalis TX1341]
          Length = 305

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|72536073|gb|AAZ73139.1| geranylgeranyl pyrophosphate synthase [Enterobacteriaceae bacterium
           DC416]
          Length = 301

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 80/248 (32%), Positives = 120/248 (48%), Gaps = 20/248 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
                S L +    +   L+ LL         Q  DR+ +A+R   L  GK+IR  L+  
Sbjct: 8   TASQESDLLQLHHALQAHLEHLLP------AGQQADRVRAAMRAGTLAPGKRIRPLLLLL 61

Query: 61  CASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            A     +      L +  A+E +H  SLI DD+PSMDN  +RRG+P +H +Y E  AI+
Sbjct: 62  AARDMGCDVAQQGILDLACAVEMVHAASLILDDIPSMDNARMRRGRPAIHCEYGENVAIL 121

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQ 176
           A   LL+ AFE+I+     L    +++ +  L+  +GLQG++ GQ  D+ D         
Sbjct: 122 AAVALLSRAFEVIA-LAPGLPATHKAEAIAELSSAVGLQGLVQGQFQDLHDGAHSRSPEA 180

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--------L 228
           + +  ++KT  L     +  AI A AS   ++RL  F ++LG  FQL DDL         
Sbjct: 181 ITLTNELKTSVLFRATLQMAAIAADASVQVRQRLSYFAQDLGQAFQLLDDLADGSKHTGK 240

Query: 229 DCEEDLPK 236
           DC +D  K
Sbjct: 241 DCHQDQGK 248


>gi|300742151|ref|ZP_07072172.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Rothia dentocariosa M567]
 gi|300381336|gb|EFJ77898.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Rothia dentocariosa M567]
          Length = 353

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +  RI+  L + +  T            ++A    L GGK++R  L    A++    +  
Sbjct: 41  SLARIEERLAEAISYTDKLAD-------VAARHLLLAGGKRVRPLLTLLAAAVDGQINDD 93

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +     +E  H  +L HDD+  MD+   RRG  T    +    AI+ G+ + + A  ++
Sbjct: 94  VIEAAVVVELTHLATLYHDDV--MDDAPKRRGVDTAQTIWGNSVAILTGDLIFSRASLLV 151

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S   T      R   + + T    + G L       +++ I       + + KTG+L+  
Sbjct: 152 SDLGT------RPMKIQAQTFERLVLGQLYETTGVRENQDI-LDHYISVIEGKTGSLIAA 204

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A E G+++A AS+   + L  +GE +G+ FQLADD++D   D
Sbjct: 205 AGEYGSLLAGASEEVIQMLATYGELVGVAFQLADDVIDIVSD 246


>gi|212692554|ref|ZP_03300682.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855]
 gi|237709128|ref|ZP_04539609.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA]
 gi|237724389|ref|ZP_04554870.1| octaprenyl-diphosphate synthase [Bacteroides sp. D4]
 gi|265752655|ref|ZP_06088224.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA]
 gi|212664839|gb|EEB25411.1| hypothetical protein BACDOR_02051 [Bacteroides dorei DSM 17855]
 gi|229437258|gb|EEO47335.1| octaprenyl-diphosphate synthase [Bacteroides dorei 5_1_36/D4]
 gi|229456824|gb|EEO62545.1| octaprenyl-diphosphate synthase [Bacteroides sp. 9_1_42FAA]
 gi|263235841|gb|EEZ21336.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_33FAA]
          Length = 324

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 10/226 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           KLQ+    ID   ++   +         N  L   + Y     GK +R  L    A LF 
Sbjct: 3   KLQQIKLPIDKEFEEF-RRLFDSSLQSSNSLLSEVLSYIKQRNGKMMRPILALLIAKLFG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             + + L    ++E +H  SL+HDD+  +D    RRG+ +V+  Y+   +++ G+ +L  
Sbjct: 62  EINDSTLHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNAIYNNKVSVLVGDYMLAT 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           + +  +  +     ++ + L  +L+    +      Q+ +I      E   + + + KT 
Sbjct: 120 SLKHSAMTREITIVDLVACLGQNLSEGEII------QLANINASEFSEEVYYDVIRKKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   + E+GAI  HAS    +  R FGE +GI FQ+ DD+ D   
Sbjct: 174 ALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQIKDDIFDYYS 219


>gi|315150866|gb|EFT94882.1| polyprenyl synthetase [Enterococcus faecalis TX0012]
          Length = 305

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|291299508|ref|YP_003510786.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290568728|gb|ADD41693.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 368

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 15/188 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L   CA         A+    A+E +H +SL+HDD+  +D    RR + TV 
Sbjct: 66  GGKALRPALTLLCAEAAGGQADEAVPAAVAVELVHNFSLLHDDV--IDGDRTRRHRATVW 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   TAI+AG+ LL+ AFE+++           S+          +  +  GQ+ D+ 
Sbjct: 124 AVFGRPTAILAGDSLLSLAFEVLAE----------SRPAGVGVLAEAVTRLNDGQLRDMD 173

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +   +   +   KTGALM  AC  GA    A      R   FG  LG+ FQ AD
Sbjct: 174 LETRVDVSLAECRDMAARKTGALMAAACRLGAESGGADGERAGRFADFGGALGLAFQAAD 233

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 234 DLLGIWGD 241


>gi|212550626|ref|YP_002308943.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548864|dbj|BAG83532.1| octaprenyl-diphosphate synthase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 328

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+IR  ++   A L     +  +     +E +H  +LIHDD+  +DN  +RRG P+V  
Sbjct: 49  GKRIRPIILILSAKLCGEPTIKTIEYAVILELLHVATLIHDDV--VDNAVLRRGNPSVMA 106

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++    A++ G+ +L+ A         + K+    Q++  L  N+    +   Q++    
Sbjct: 107 KFGNQAAVLLGDYILSKAI----KQGIETKNFAILQVLTHLAQNLCEGELT--QLIFSSK 160

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + IDE   F I + KT  L     + GA+  +A   + + L+  GE LGI FQ+ DDLLD
Sbjct: 161 KIIDENHYFEIIRKKTAILFSVCSKIGALSVNADVKKNKTLQLIGEYLGICFQIRDDLLD 220

Query: 230 C 230
            
Sbjct: 221 Y 221


>gi|294085837|ref|YP_003552597.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665412|gb|ADE40513.1| decaprenyl diphosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 357

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 12/199 (6%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHL----TALRVGAAIECIHCYSLIHDDLPSMDN 97
           A      GGK++R  +    A + + N       A+++  A+E IH  +L+HDD+  +D 
Sbjct: 62  AGHLITSGGKRMRPLMTLAGARIASPNTTSCSVAAIKLATAVEFIHSATLLHDDV--IDE 119

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+ T +  +    +++ G+ L   AFE++            S     +T     Q
Sbjct: 120 SNMRRGQDTANALWGNDASVLVGDFLFARAFELMVESGNIDVLGTLSSASARITEAEIKQ 179

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
             + G      +          + + KT  L   A  SGA ++ A +   + +  +G NL
Sbjct: 180 MTVAG------NPDTRLEDYLDVIEGKTAILFAAAAASGARISGADEQITQAMHMYGLNL 233

Query: 218 GIIFQLADDLLDCEEDLPK 236
           G+ FQ+ DD LD   D  +
Sbjct: 234 GLAFQIMDDALDYTADSAQ 252


>gi|74100794|gb|AAZ99641.1| isoprenyl diphosphate synthase [Streptomyces lividans TK24]
          Length = 336

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L + +Q     ++   + LL  T S +       +  A ++ +  GG++ R  LV  
Sbjct: 13  DQALEADVQAGLVAVE---EGLLEATKSEVPF-----ITEAAQHLVRAGGERFRPLLVML 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++D   A++ G
Sbjct: 65  SAQFGDPYAPGIVPSAVVVELTHLATLYHDDV--MDEAAVRRGVPSANTRWDNSVAVLTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV 177
           + L   A +I++    +                +  + ++ GQ+L+    QD        
Sbjct: 123 DFLFARASQILADLGPEAV----------RVQALAFERLVTGQILETAGPQDGRDPVDHY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +C  GA+M+ A +   + L  +GE LG+ FQLADD+LD   D
Sbjct: 173 LDVLGGKTGSLVAVSCRFGAMMSGADETVVDVLTQYGERLGVAFQLADDVLDIASD 228


>gi|315028641|gb|EFT40573.1| polyprenyl synthetase [Enterococcus faecalis TX4000]
          Length = 305

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|324505880|gb|ADY42520.1| Decaprenyl-diphosphate synthase subunit 1 [Ascaris suum]
          Length = 432

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 31/253 (12%)

Query: 5   LPSKLQENSKR-----IDTILDDL-LLQTASHMQTQHNDRLLS-----AIRYALLGGKKI 53
           LP  + E  ++     + ++LD   L  TA    T  + +        A  Y   GGK  
Sbjct: 84  LPEFISEKLRKLQYEVVQSLLDQSSLETTADSCDTPSSSKFTQNLQKMAKYYFDQGGKLF 143

Query: 54  RSFLVTECASLFNVNHLTA--------------LRVGAAIECIHCYSLIHDDLPSMDNGY 99
           R  +    A   N                     ++    E IH  SL+HDD+  +D   
Sbjct: 144 RPTVSLLMAHACNQIKPKTPVVESGRETVTANQYKIAVISEMIHTASLVHDDV--IDESD 201

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTV+  +    A++ G+ +L  A +++ S       ++ + ++  L     +Q  
Sbjct: 202 VRRGSPTVNAIWGNKMAVLVGDFILARATQVLCSIARPNVISVMATIIEDLVRGEFMQMT 261

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            G +     D  +   +       KT +L   +C+S A++A   +  +E    +G +LG+
Sbjct: 262 TGSET----DATLRFDKYMAKTYSKTASLFANSCKSAAMLADIPEANEEIAFEYGRSLGL 317

Query: 220 IFQLADDLLDCEE 232
            FQL DDLLD   
Sbjct: 318 AFQLVDDLLDFVS 330


>gi|315283868|ref|ZP_07871917.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL
           S4-120]
 gi|313612487|gb|EFR86580.1| heptaprenyl diphosphate synthase component 2 [Listeria marthii FSL
           S4-120]
          Length = 288

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 11/191 (5%)

Query: 48  LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK +R       A    + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT
Sbjct: 7   AGGKLLRPAFALLSAQAGPDFDKERAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPT 64

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQML 165
           +H +Y    A+  G+ L    F+I+S+  + +      + +   + NI    M    QM 
Sbjct: 65  IHSKYGRNYAVYTGDYLFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMR 118

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                 +   +       KT  L   +C SGA  + AS+    +    G  LG+ FQ+ D
Sbjct: 119 TSYKMNVTVREYLTRISGKTAQLFALSCYSGASGSKASRLTVAKCYNIGHYLGMAFQIID 178

Query: 226 DLLDCEE-DLP 235
           D+LD    D  
Sbjct: 179 DVLDYTSTDEG 189


>gi|315172839|gb|EFU16856.1| polyprenyl synthetase [Enterococcus faecalis TX1346]
          Length = 305

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 8/185 (4%)

Query: 49  GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK +R       +      +   A  + A+IE +H  +L+HDD+  +D    RRG PT+
Sbjct: 23  GGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI--VDEADTRRGLPTL 80

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++   TA+  G+ L    F+++S   + LK    S  + S +    L G L GQM + 
Sbjct: 81  RSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSMEKVLTGEL-GQMDNR 135

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  +   Q       KT  L   +C  GA  +  SQ   +R    GEN+G+ FQ+ DD+
Sbjct: 136 YNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDI 195

Query: 228 LDCEE 232
           LD  +
Sbjct: 196 LDYTQ 200


>gi|148244594|ref|YP_001219288.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326421|dbj|BAF61564.1| geranyltranstransferase [Candidatus Vesicomyosocius okutanii HA]
          Length = 284

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 124/236 (52%), Gaps = 19/236 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNV 67
                 R++T L+  L              L  A+RY+ L  GK+ R  L    A++F+ 
Sbjct: 3   FNAYITRVNTKLEKYLPVQGY---------LTKAMRYSTLTNGKRFRPILTYSVANIFST 53

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +         AIE IH YSLIHDDLP+MD+  IR  +PT H  + E  AI+ G+GL T A
Sbjct: 54  HLDLVDSSSCAIEFIHAYSLIHDDLPAMDDDDIRHNQPTCHKLFGEAQAILVGDGLQTLA 113

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
           F+++ +    +  + + +L+ SLTH      M  GQ +D  I  + ++ T +  + + KT
Sbjct: 114 FKVLVN-DNLIGSDTKIELIKSLTHAS--FEMAEGQAIDLSIIAKQVNITTLETMHRKKT 170

Query: 186 GALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE-D--LPKK 237
           GAL+  A   GAI++ + +  ++  L  F +++G+ +Q+ DD+LD E  D  L KK
Sbjct: 171 GALLNCAVNLGAIVSKNCNNKDQTILNIFSKDIGLAYQIQDDVLDIETPDELLGKK 226


>gi|148676195|gb|EDL08142.1| prenyl (solanesyl) diphosphate synthase, subunit 1 [Mus musculus]
          Length = 407

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  A         +    E IH  +L+H
Sbjct: 112 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 171

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 172 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIED 229

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 230 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 283

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 284 AYQYGKNVGIAFQLIDDVLDFTS 306


>gi|318057825|ref|ZP_07976548.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actG]
 gi|318080208|ref|ZP_07987540.1| polyprenyl diphosphate synthase [Streptomyces sp. SA3_actF]
          Length = 306

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 15/196 (7%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +A    L GGK+ R  LV   A   +      +     +E  H  +L HDD+  MD   +
Sbjct: 15  AAQHLVLAGGKRFRPLLVMLAAQFGDPEAPGIVPSAVVVELTHLATLYHDDV--MDEATV 72

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  + + ++D   A++ G+ L + A +I++    +                   + ++
Sbjct: 73  RRGVDSANARWDNSVAVLTGDFLFSRASQILAGLGPEAV----------RIQAEAFERLV 122

Query: 161 GGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ+L+    +D          +   KTG+L+  A   GA+M+ A     E L  +GE L
Sbjct: 123 TGQILETAGPRDGRDPVDHYLDVLSGKTGSLVAVATRYGAMMSGAGDEVVEVLAQYGERL 182

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQLADD+LD   D
Sbjct: 183 GVAFQLADDVLDIASD 198


>gi|238062225|ref|ZP_04606934.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
 gi|237884036|gb|EEP72864.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
          Length = 356

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 15/224 (6%)

Query: 15  RIDT----ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           R++     +L+ +  +  + + +  +  +  A R+ +  GGK+ R  LV   A   +   
Sbjct: 36  RVEASVLGVLESVEAELRASVASA-DPLVTEAARHLVEAGGKRFRPLLVALGAQFGDPTD 94

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +     +E  H  +L HDD+  MD   +RRG P+ + ++    AI+ G+ L   A +
Sbjct: 95  PQVVSAAVVMELTHLATLYHDDV--MDEAAVRRGAPSANSRWTNSVAILVGDYLFARAAD 152

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I +    +      +  + + T    + G +  + +  ++     +    +   KTG+L+
Sbjct: 153 ISADLGPE------AVRLQARTFARLVHGQIA-ETVGPRNGQDPVSHYLHVIAEKTGSLI 205

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   G + A AS    E L  +GE +G+ FQL+DDLLD   +
Sbjct: 206 ATSARFGGLFAGASATHTEALAGYGETIGVAFQLSDDLLDIASE 249


>gi|300776952|ref|ZP_07086810.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
           35910]
 gi|300502462|gb|EFK33602.1| possible geranyltranstransferase [Chryseobacterium gleum ATCC
           35910]
          Length = 325

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 10/223 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++E  + I+  +     +    MQ++    L    R+ +   GK++R   V  CA L   
Sbjct: 5   VEEIKRPINDEMKLFEQKFYESMQSKVA-LLDKVTRFIVTTKGKQMRPMFVFLCAKLVGE 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 R  + IE IH  +L+HDD+  +D  + RR   +++  +    A++ G+ LL+ +
Sbjct: 64  VTEKTYRGASMIELIHTATLVHDDV--VDESFKRRNFFSINALWKNKIAVLVGDYLLSKS 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             + +  K      + S+ +  ++    L      Q+   +   I E   + I + KT  
Sbjct: 122 VLLSTDHKDYDLLGVISRTIREMSEGELL------QLEKARKLDITEDVYYEIIRQKTAT 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           L+   CE G +  +A +   +++  FG   G+ FQ+ DDL D 
Sbjct: 176 LIAACCEIGVLSNNADEALAKKMMDFGTFTGMAFQIKDDLFDY 218


>gi|281342287|gb|EFB17871.1| hypothetical protein PANDA_017357 [Ailuropoda melanoleuca]
          Length = 363

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 25/224 (11%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR- 74
           + I  +LL+ TA          L     Y   G GK  R  +V   A   N++H  +   
Sbjct: 56  EDIRKELLISTA---------ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSRDV 106

Query: 75  ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +    E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+ +L+ A 
Sbjct: 107 QASQRSIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAAS 164

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             ++        +I +Q++  L     L      Q+   ++E             KT +L
Sbjct: 165 IALARIGNTAVISILTQVIEDLVRGEFL------QLGSKENENERFAHYLEKTFKKTASL 218

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +C++ +++        E    +G+N+GI FQL DD+LD   
Sbjct: 219 IANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTS 262


>gi|319949942|ref|ZP_08023938.1| polyprenyl synthetase [Dietzia cinnamea P4]
 gi|319436392|gb|EFV91516.1| polyprenyl synthetase [Dietzia cinnamea P4]
          Length = 344

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 20/235 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + L+     ++ +L   L      +          A+     GGK+ R  +    
Sbjct: 21  DADLAAALRGRLDEVEKLLVSRLESGEDFLSEV-------ALHLVTAGGKRFRPIVTLLA 73

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             +    +H   ++     E IH  +L HDD+  MD   +RRG  + + ++D  TAI+AG
Sbjct: 74  GEIGPEPDHERLVKAAVVCEMIHLATLYHDDV--MDEASMRRGVESANSRWDNSTAILAG 131

Query: 121 NGLLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + L  ++  +++       QL     ++L+          G +GG+  D           
Sbjct: 132 DFLFAHSSMLLADLGPAAVQLIAQTFAELVTGQMRETVGPG-VGGRDEDAA------QHY 184

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTG+L+  A + G   + A+  +  RLR FG+ +GI FQ+ADD++D   
Sbjct: 185 LRVIWEKTGSLIAAAAQFGGEYSGATGEQIARLRRFGDAVGIAFQIADDIIDIAS 239


>gi|255262881|ref|ZP_05342223.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62]
 gi|255105216|gb|EET47890.1| geranylgeranyl pyrophosphate synthetase [Thalassiobium sp. R2A62]
          Length = 295

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 14/223 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
             + RI+T +   +   A         +L SA+ YA+  GG +IR  ++   AS    + 
Sbjct: 2   AFTARIETAIQSAI---AGGQTAPSPGKLASALHYAVTPGGARIRPTILLSVASACGDDM 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A    AA+E IHC SL+HDDLP  D+   RRGKP VH  + E  A++ G+ L+  AF
Sbjct: 59  PKLADAAAAALELIHCASLVHDDLPCFDDADTRRGKPAVHRAFGEPLAVLTGDSLIVMAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            +++     L      +LM  L    G+  G+  GQ      E  D+  +    + KTGA
Sbjct: 119 TVLTQS-AHLHPTRAIELMKVLAERTGMPNGICAGQGW----ESEDQIDLSAYHRAKTGA 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           L   A + GAI A       + L   G  +G  FQ+ADDL D 
Sbjct: 174 LFIAATQMGAIAAGQDGAPWDEL---GARIGEAFQVADDLRDA 213


>gi|307283879|ref|ZP_07564052.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
 gi|306503529|gb|EFM72776.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
 gi|315147034|gb|EFT91050.1| polyprenyl synthetase [Enterococcus faecalis TX4244]
          Length = 305

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|302539319|ref|ZP_07291661.1| predicted protein [Streptomyces sp. C]
 gi|302448214|gb|EFL20030.1| predicted protein [Streptomyces sp. C]
          Length = 336

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 7/220 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
             L ++L +  +    +H   L +  RYALL  GK +R  L+   A     +    L   
Sbjct: 12  DFLAEVLAKEFTRRWPEHAGGLDAVHRYALLPTGKLLRPRLLALSALAVGGSLRAVLPAA 71

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
              E  H  SL+HDD+  +D   +RRG+P VH ++    AI+AGN L    F  ++    
Sbjct: 72  VGFEAAHTGSLLHDDI--IDQDALRRGRPAVHTEFGPQMAIVAGNALFFTWFTTLAECAA 129

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFAC 193
               + R    +  T     Q +  G  L+     D          + + KT AL   AC
Sbjct: 130 HGIPHQRIVAAME-TQAKAGQQICRGAALELTLAGDLEAPPDVYLEMARAKTAALFDAAC 188

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             GA++   ++++   L  FG++LG  FQ+ DDLL    D
Sbjct: 189 TVGAVLGGGTEHQIAALGAFGDHLGCAFQIRDDLLPYLGD 228


>gi|227555199|ref|ZP_03985246.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           HH22]
 gi|307292276|ref|ZP_07572139.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
 gi|312905555|ref|ZP_07764669.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
 gi|227175657|gb|EEI56629.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           HH22]
 gi|306496691|gb|EFM66245.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
 gi|310631284|gb|EFQ14567.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
 gi|315162309|gb|EFU06326.1| polyprenyl synthetase [Enterococcus faecalis TX0645]
 gi|315574620|gb|EFU86811.1| polyprenyl synthetase [Enterococcus faecalis TX0309B]
 gi|315576540|gb|EFU88731.1| polyprenyl synthetase [Enterococcus faecalis TX0630]
          Length = 305

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|126734161|ref|ZP_01749908.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
 gi|126717027|gb|EBA13891.1| Geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
          Length = 283

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 12/206 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVG-AAIECIHCYSLIHDDLP 93
             +L +A+ YA+  GG +IR  ++T  A     +          A+E IHC SL+HDDLP
Sbjct: 14  PAKLAAALEYAVTPGGARIRPTILTSVAMACGDDRPELTNAAGVALEVIHCASLVHDDLP 73

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+  +RRGKP VH  Y E  A++AG+ L+   F+I++   + + D     + +  T  
Sbjct: 74  CFDDADMRRGKPAVHRAYSEPLAVLAGDSLIIMGFQILARAASDMPDRALRLIDILGTRT 133

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
               G+  GQ      E  D+  +    + KTGAL   A + GA+ A     E E     
Sbjct: 134 GMPFGICAGQGW----ESEDQIDLSAYHQAKTGALFIAATQMGAVAAG---QEAEPWEEL 186

Query: 214 GENLGIIFQLADDLLDC---EEDLPK 236
           G  +G  FQ+ADDL D    E+ L K
Sbjct: 187 GARIGEAFQVADDLRDALCDEQTLGK 212


>gi|261878883|ref|ZP_06005310.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361]
 gi|270334523|gb|EFA45309.1| octaprenyl-diphosphate synthase [Prevotella bergensis DSM 17361]
          Length = 325

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 14/233 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLF 65
            +    + I++ L+D +      +   H D LLS +   +    GK++R  L+   A  +
Sbjct: 3   YVSTIKQPINSELNDFIALFDESLS--HTDGLLSQVLDHVRQRAGKRMRPILILLMAKNY 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                T L     +E +H  SL+HDD+  +D    RRG+ +V+ +Y+   A++AG+ +L+
Sbjct: 61  GQITSTTLNAAVGLELLHTASLMHDDV--VDESEERRGQASVNAEYNNKVAVLAGDYVLS 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   ++    +      ++L  +L++   L      Q+  IQ++ I ET  + +   KT
Sbjct: 119 TALLHVNFTHNEAIIETLAELGRTLSNGEIL------QLSAIQNQSISETTYYDVISQKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
            AL     E GA+ A A      + R FG N+GIIFQ+ DD+ D    +++ K
Sbjct: 173 AALFEACAEVGALSAGADAAATTQARNFGRNIGIIFQIRDDIFDYYDTDEIGK 225


>gi|251796421|ref|YP_003011152.1| trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2]
 gi|247544047|gb|ACT01066.1| Trans-hexaprenyltranstransferase [Paenibacillus sp. JDR-2]
          Length = 324

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 15/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + +KL+ +  RI+  L+  +      + ++ +  LL A      GGK++R   V     
Sbjct: 5   DIFAKLKGDMSRIEQELERSI-SFGDELLSETSLHLLKA------GGKRLRPVFVLLAGK 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +     +V   +E IH  SL+HDD+  +D+   RRG+ TV  ++D   A+  G+ +
Sbjct: 58  FGQYDLDKLTKVAVPLELIHMSSLVHDDV--IDDASTRRGQLTVKSKWDNRIAMYTGDYI 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A  I++         + S+ ++ ++           Q+    +         +  + 
Sbjct: 116 FGRALTIVTELDDPFIHQMLSKSLVQMSIGE------MEQIRYFFNTEQTIRDYLLRIRR 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L+  +C+ GA  A A +    RL  +G N+G+ FQ+ DD+LD   
Sbjct: 170 KTALLIAISCQLGAAAAGADRATLNRLYRYGYNVGMTFQIRDDMLDLFG 218


>gi|325299489|ref|YP_004259406.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM
           18170]
 gi|324319042|gb|ADY36933.1| Trans-hexaprenyltranstransferase [Bacteroides salanitronis DSM
           18170]
          Length = 324

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+ V +   L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPMLVMLMAKLYGVVNPATLHSALSLELLHTASLVHDDV--VDKSDKRRGQASVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            YD   +++ G+ +L  +    +  K     ++ ++L  +L+    +      Q+ +  +
Sbjct: 103 LYDNRVSVLVGDYMLATSLRHAAYTKEIELVDLVARLGQNLSEGEIV------QLANTNN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT AL   + ESGA+   AS  + +    FGE +GI FQ+ DD+ D
Sbjct: 157 TDFSEEIYFDVIRKKTAALFTASAESGALSVKASAEDVDNAALFGEMIGIAFQIKDDIFD 216

Query: 230 CE--EDLPK 236
               E+L K
Sbjct: 217 YFENEELGK 225


>gi|145596562|ref|YP_001160859.1| polyprenyl synthetase [Salinispora tropica CNB-440]
 gi|145305899|gb|ABP56481.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
          Length = 356

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           + GLP       + ++  L   +              +  A R+ L  GGK+ R  LV  
Sbjct: 34  DAGLPDSAFRVLEGVEAALRADVASADPF--------VTEAARHLLDAGGKRFRPLLVAL 85

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++    AI+ G
Sbjct: 86  GAQFGDPTREQVVPAAVVVELTHLATLYHDDV--MDEAPVRRGAPSANSRWTNSVAILVG 143

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   A +I +   T+      +  + + T    + G +  + +  +           +
Sbjct: 144 DYLFARAADISADLGTE------AVRLQARTFARLVHGQIA-ETVGPRPGVDPVAHHLHV 196

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              KTG+L+  A   G + + AS    + L  +GE +G+ FQL+DDLLD   +  +
Sbjct: 197 IAEKTGSLIATAARFGGMFSGASPTHTQALAGYGEAIGVAFQLSDDLLDISSEAER 252


>gi|195977755|ref|YP_002122999.1| geranyltranstransferase LepA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195974460|gb|ACG61986.1| geranyltranstransferase LepA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 289

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/172 (37%), Positives = 92/172 (53%), Gaps = 7/172 (4%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                + AAIE IH  SLIHDDLP+MDN   RRG+ T H Q+DE TAI+AG+ L    F 
Sbjct: 58  DAHYAIAAAIEMIHTGSLIHDDLPAMDNDDYRRGRLTSHKQFDEATAILAGDSLFLDPFA 117

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGA 187
           +I+     L  ++  QL+   +   G  GM+GGQ+LD++ E   ++  ++  I   KTG 
Sbjct: 118 LIA--GADLPADLLVQLIQQFSLASGTFGMVGGQLLDMKGEQQLLNIQELSDIHANKTGK 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+     +  I+A  S +    L   G  +G  FQ+ DD+LD      +L K
Sbjct: 176 LLTLPFVAAGIIAEQSADVLSCLWEAGRLVGQAFQIRDDILDVTASFDELGK 227


>gi|90577181|ref|NP_062374.2| decaprenyl-diphosphate synthase subunit 1 [Mus musculus]
 gi|85700953|sp|Q33DR2|DPS1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           1; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 1; AltName: Full=Solanesyl-diphosphate synthase
           subunit 1; AltName: Full=Trans-prenyltransferase 1;
           Short=TPT 1
 gi|81157937|dbj|BAE48219.1| subunit 1 of solanesyl diphosphate synthase [Mus musculus]
 gi|220941795|emb|CAX15884.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus]
          Length = 409

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  A         +    E IH  +L+H
Sbjct: 114 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 173

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 174 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIED 231

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 232 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 285

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 286 AYQYGKNVGIAFQLIDDVLDFTS 308


>gi|326533542|dbj|BAK05302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 424

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 30/249 (12%)

Query: 6   PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTE 60
            S+ +E     + + D+L  L      M      +L SA  Y       GK+ R  ++  
Sbjct: 77  SSRAEEQQDPFELVADELSILGNRLRSMVAAEVPKLESAAEYFFKVGAEGKRFRPTVLLL 136

Query: 61  CASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            AS                            +    E IH  SL+HDD+  +D+   RRG
Sbjct: 137 MASALKFPIPESTDIGVFSILASKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRG 194

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             +++       +++AG+ LL+ A   +++        + S +  ++ H +  + M   Q
Sbjct: 195 VTSLNCIMGNKLSVLAGDFLLSRACVALAALGNT---EVVSLMATAVGHLVTGETM---Q 248

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           M   +++             KT +L+  +C++ AI+A  +         +G NLG+ FQL
Sbjct: 249 MSTSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTAEVSVLAYEYGRNLGLAFQL 308

Query: 224 ADDLLDCEE 232
            DD+LD   
Sbjct: 309 IDDVLDFTG 317


>gi|114629763|ref|XP_507706.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Pan
           troglodytes]
          Length = 415

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 120 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVH 179

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 180 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 237

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 238 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 291

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 292 AYQYGKNVGIAFQLIDDVLDFTS 314


>gi|319900543|ref|YP_004160271.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
 gi|319415574|gb|ADV42685.1| Polyprenyl synthetase [Bacteroides helcogenes P 36-108]
          Length = 312

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 8/183 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+       L    A+E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 33  GKMMRPMLVLLAAKLYGEICPATLHAAVALELLHNASLVHDDV--VDESTERRGQLSVNA 90

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A+++G+ LL  A   +   +     +I S L   L     L      Q+ ++ +
Sbjct: 91  IFNNKVAVLSGDYLLATALVQVGLTRNHAIIDIVSCLGQDLAEGELL------QLSNVSN 144

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT  L     ++GA+   A     E  R FGE +G+ FQ+ DD+ D
Sbjct: 145 LQFSEDIYFDVIRKKTAVLFAACTKAGALSVGADGERAEFARLFGEYIGLCFQIKDDIFD 204

Query: 230 CEE 232
             E
Sbjct: 205 YFE 207


>gi|326921623|ref|XP_003207056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
           [Meleagris gallopavo]
          Length = 336

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 25/231 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
           ++     + I  +LL+ TA          L     Y   G GK  R  +V   A   N++
Sbjct: 22  KDLKNLYEDIKKELLVSTA---------ELREMCEYYFDGKGKAFRPMIVVLMARACNIH 72

Query: 69  HLTAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           H  +         V    E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+
Sbjct: 73  HSNSREVQASQRSVAIIAEMIHTASLVHDDV--IDDANSRRGKMTVNQIWGERKAVLAGD 130

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            +L+ A   ++        ++ +Q++  L     L      Q+   ++E           
Sbjct: 131 FILSAASLALARIGNTTIISVLTQVIEDLVRGEFL------QLGSKENENERFAHYLEKT 184

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT +L+  +C++ +I++       E    +G+N+GI FQL DD+LD   
Sbjct: 185 FKKTASLIANSCKAVSILSCPDPKVHEIAYQYGKNIGIAFQLIDDVLDFTS 235


>gi|28572234|ref|NP_789014.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27]
 gi|28410365|emb|CAD66751.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei
           TW08/27]
          Length = 338

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 26/238 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +G L   +     R++    DLLL+T        +  L       + GGK+ R  LV   
Sbjct: 15  SGSLSDDISPALDRVE----DLLLETVGDCHEIVSHLL-------VSGGKRARPLLVLLT 63

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + + +  +   +R  A IE IH  SL HDD+  MDN YIR G  T H  + +  AI+AG+
Sbjct: 64  SCMGSGINDAVIRAAAGIELIHLGSLYHDDV--MDNAYIRHGSITAHRLWGKSAAILAGD 121

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A  +  +   +                   Q M+ GQ+ +   I D         
Sbjct: 122 FLFAKAGVLGLNLDKRAIA----------VQTEAFQRMISGQLSETLGISDSLDPLEAYI 171

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + + KTG+L+  + + GAI+  AS +  E LR FGE++G+ FQL DD++D      K
Sbjct: 172 EVSRGKTGSLIAASAQVGAILGDASLSTLEPLRDFGESIGVAFQLVDDVIDLSGKSGK 229


>gi|300782468|ref|YP_003762759.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32]
 gi|299791982|gb|ADJ42357.1| trans-hexaprenyltranstransferase [Amycolatopsis mediterranei U32]
          Length = 350

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 18/218 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T ++ LL +         ND   +A+     GGK+ R       A          +   A
Sbjct: 44  TEVEKLLREVVRSDVQAVND---AALHLVEAGGKRFRPLFTLLAAQFGPKQDDHVIVAAA 100

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H  +L HDD+  MD   +RRG  +V+ ++D   AI+ G+ L  +A  +++   T 
Sbjct: 101 AVELVHLATLYHDDV--MDEATMRRGAESVNARWDNTIAILTGDFLFAHASRLVADLGTD 158

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACE 194
               I                ++ GQM +       +        +   KTG+L+  +  
Sbjct: 159 AARII----------AETFGELVTGQMRETVGPGPGDDAVAHYLTVIAQKTGSLIATSGR 208

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            G +M+ A++   E LR FG+ +G  FQ++DD++D   
Sbjct: 209 FGGMMSGAAEEHIEALRRFGDIIGTAFQISDDIIDIAS 246


>gi|48477920|ref|YP_023626.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM
           9790]
 gi|48430568|gb|AAT43433.1| geranylgeranyl pyrophosphate synthase [Picrophilus torridus DSM
           9790]
          Length = 345

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 15/239 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLL-SAIRYALLGGKKIRSFLVTECASLFNV 67
           L     +I+  L +   +       ++   ++   + + + GGK++R  ++    SLFN 
Sbjct: 8   LSSLKDKIEKELKNFFEKKLDACDDENIRYVIKELMEFTMNGGKRLRPIMMITGYSLFND 67

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI---------QYDEVTAII 118
                ++   +IE    Y LIHDD+  MD   +RRG+P+ H          +     AI+
Sbjct: 68  IDDNIIKASISIELAQSYLLIHDDI--MDQSDMRRGRPSFHRSVETRLNDPRNSMNIAIV 125

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
           AG+ + +++ E + +    +K+ I +    S       +G L      + DEF  E+++ 
Sbjct: 126 AGDLIDSFSHEALLTSGFDIKNLISADYEFSKVIEDTGKGQLIDIFSSLDDEF-SESRLM 184

Query: 179 MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +  MKT    +      GA++A  ++ + + LR +G+N+GI FQ+ DD+L    D  +
Sbjct: 185 KLHYMKTARYTIEGPLVMGAMLAG-NKKDIDYLRIYGKNIGIAFQIKDDILGLFGDEKQ 242


>gi|312899735|ref|ZP_07759057.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
 gi|311293131|gb|EFQ71687.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
          Length = 300

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNISGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|217039783|gb|ACJ76979.1| geranyl diphosphate synthase [Linum usitatissimum]
          Length = 209

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 24/212 (11%)

Query: 37  DRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVN-------------HLTALRVGAAIE 80
            +L +A  Y    G  GK+ R  ++   A+  NV+                  R+    E
Sbjct: 3   PKLAAAAEYFFKFGVEGKRFRPTVLLLMATALNVHLPIPNSVPVSTELRARQQRIAEITE 62

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D+   RRG  ++++      A++AG+ LL+ A   ++S +     
Sbjct: 63  MIHVASLLHDDV--LDDADTRRGIKSLNLVMGNKVAVLAGDFLLSRACVALASLRNTEVV 120

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           ++ + ++  L     +      QM    ++             KT +L+  +C++ A++A
Sbjct: 121 SLLATVVEHLVTGETM------QMTTTSEQRCSMEYYMQKTYYKTASLISNSCKAVALLA 174

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +         +G NLG+ FQL DD+LD   
Sbjct: 175 GQTTEVATLAFEYGRNLGLAFQLIDDVLDFTG 206


>gi|163786379|ref|ZP_02180827.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1]
 gi|159878239|gb|EDP72295.1| octaprenyl-diphosphate synthase [Flavobacteriales bacterium ALC-1]
          Length = 325

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 13/218 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +    +       LL+ I + +    GK++R   V   A +           R  + I
Sbjct: 17  LFEQKFQLSMASKVALLNRITHYIVNRKGKQMRPMFVFLVAKMMNNGEVSERTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDV--VDDSNRRRGFFSINALWKNKIAVLIGDYLLSKG--LLLSIDNNDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D ++   ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLLK---IISVAVREMSEGELL-QIEKARQLDITEAVYYDIIRQKTATLIAACCSLGAAS 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
              +  E E +R FGE +G+ FQ+ DDL D  EE + K
Sbjct: 189 VKPNSPEVESMRKFGELIGMAFQIKDDLFDYGEEAIGK 226


>gi|331699298|ref|YP_004335537.1| trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953987|gb|AEA27684.1| Trans-hexaprenyltranstransferase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 331

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 26/239 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +   +  KR++ +L    +Q   H   + +  L+ A      GGK+ R       A +
Sbjct: 16  LAAVTTDGLKRVEDLLHR-EVQADYHFVAETSLHLIDA------GGKRFRPLFTLLSAQV 68

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N ++   +   A +E +H  +L HDD+  MD+  +RRG  + + ++D   AI+ G+ L
Sbjct: 69  GPNPDNDDVITAAAVVELVHLATLYHDDV--MDSATMRRGAESANSRWDNTVAILTGDFL 126

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMI 180
             +A  +++           +  +++ T       ++ GQM + +     +        +
Sbjct: 127 FAHASRLVADLGPD------AVRIIAETFA----ELVTGQMRETRGPAEGDDPVEHYLRV 176

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
              KTG+L+  +   G + +  +  + E LR FG  +G  FQ++DD++D      D  K
Sbjct: 177 VAEKTGSLIATSGRYGGMFSGCTPEQTESLRRFGATIGTAFQISDDVIDIASPSDDSGK 235


>gi|225009967|ref|ZP_03700439.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005446|gb|EEG43396.1| Polyprenyl synthetase [Flavobacteria bacterium MS024-3C]
          Length = 325

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 12/212 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAA 78
           +L +            LL+ I Y +    GK++R   V   A +           R  + 
Sbjct: 16  ILFEEKFFQSMSSKVALLNRITYYIVNRKGKQMRPMFVFLTAKMLSGGSVQERTYRGASV 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  +L+HDD+  +D    RRG  +++  +    A++ G+ LL+    +        
Sbjct: 76  IELIHTATLVHDDV--VDGSDKRRGFFSINALWKNKIAVLVGDYLLSKGLLLCID----- 128

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            D+     ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA 
Sbjct: 129 NDDFDLLKIISVAVREMSEGELL-QIEKARRLDITEEVYYHIIRQKTATLIAACCALGAA 187

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                  E E++R FG  +G+ FQ+ DDL D 
Sbjct: 188 SVSPGSEEVEKMREFGSLIGMAFQIKDDLFDY 219


>gi|302338112|ref|YP_003803318.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635297|gb|ADK80724.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 322

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 10/188 (5%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            L  GK +R   +   A     +   A  + AAIE +H  +LIHDD+  +D+   RRG P
Sbjct: 41  ILAQGKMLRPSFLLLTARCGKFSKKKAYDIAAAIEMLHIATLIHDDV--IDDADTRRGVP 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQM 164
            VH +     AI+ G+ L +  F I +   T        +   SL+  +G        Q 
Sbjct: 99  AVHTKIGIRKAILMGDYLFSRCFSIAAQYAT-------IENGRSLSTAVGFICQSEIDQS 151

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               D  I           KT AL   +  +GA  +  ++ +    R  G  +G+ FQ+ 
Sbjct: 152 TKEYDFAISRRTYLRRIAGKTAALFLLSFHAGASQSKMNKTQVMWARRAGYAIGMAFQII 211

Query: 225 DDLLDCEE 232
           DD+LD   
Sbjct: 212 DDILDYTG 219


>gi|62959221|gb|AAY23718.1| farnesyl diphosphate synthase [Synechococcus elongatus CCMP1630]
          Length = 145

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P+MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDMPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E    +    +  I   KTGAL      +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALPEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|255013149|ref|ZP_05285275.1| polyprenyl synthetase [Bacteroides sp. 2_1_7]
          Length = 345

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 12/237 (5%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTEC 61
            G+  + ++  + +    +       + ++++   RL SAI   L   GK +R  LV   
Sbjct: 19  HGIMDERRKIEEPVSAEFERFNKDFEASLRSET-TRLQSAIDVILNSTGKHVRPLLVLLT 77

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A +        +     +E +H  +LIHDD+  +D    RRG P+++  +D   +++ G+
Sbjct: 78  AKVCGQVTDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGD 135

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            +L+ A       ++    ++R   ++S       +G +  Q+   ++  +DE     + 
Sbjct: 136 YVLSTAL-----IRSIQTGDLRIVGIISNLGRDLSEGEIK-QLETAEESILDENCYLQVI 189

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
           K KT  L+    E GAI + AS       R FGE LG  FQ+ DD+ D   E ++ K
Sbjct: 190 KKKTATLLSACTEIGAISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEANIGK 246


>gi|262201095|ref|YP_003272303.1| trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247]
 gi|262084442|gb|ACY20410.1| Trans-hexaprenyltranstransferase [Gordonia bronchialis DSM 43247]
          Length = 338

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 105/240 (43%), Gaps = 20/240 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++      ++ + +R++ +L        + + +  +    +A   A  GGK+ R      
Sbjct: 11  VSDEFAETVRSSLQRVEDLL-------LAELSSGDDVMTEAATHLAKAGGKRFRPMFAVL 63

Query: 61  CASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A      +    +     +E IH  +L HDD+  MD   +RRG P+ + ++    AI++
Sbjct: 64  AAQFGERPDADEVITSATVVEMIHLATLYHDDV--MDEAPLRRGAPSANARWSNSVAILS 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   A  ++S+          +  +++ T    + G +  + + ++           
Sbjct: 122 GDFLFARASRLVSTLGPD------AVRIIAETFAELVTGQMR-ETVGVKAGGDPIEHYLR 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           +   KTG+L+  A   GA+ + A+ ++ ERL   G+ +G  FQ++DD++D      D  K
Sbjct: 175 VVWEKTGSLIAAAGRFGAMASGATPDDVERLSRIGDVVGTAFQVSDDIIDISSVTGDSGK 234


>gi|325567804|ref|ZP_08144387.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
           12755]
 gi|325158495|gb|EGC70643.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
           12755]
          Length = 339

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 10/211 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTECASLFNVNHLTALRVGAAIECI 82
           L++ +  ++ +  ++ + ++ ++  GGK +R    +   A   + +   A+ + A+IE +
Sbjct: 34  LMEKSLKLKNKEVEQAILSMIHS--GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEML 91

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SLIHDD+  +D+   RR  PT+  ++    A+ AG+ L    F++++   +     +
Sbjct: 92  HTASLIHDDI--VDHADTRRKLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYASS----M 145

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           +S  M S +    L G L GQM    D  +         + KT  L   +C  GA  +  
Sbjct: 146 KSLQMNSRSMEKILAGEL-GQMSKRYDLSVTVEDYLENIRGKTAELFALSCFIGAYESGT 204

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           S     + R  GE +G+ FQ+ DD+LD  +D
Sbjct: 205 SLRFANQAREIGEAIGLAFQIMDDVLDYSQD 235


>gi|257868135|ref|ZP_05647788.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30]
 gi|257874590|ref|ZP_05654243.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10]
 gi|257802249|gb|EEV31121.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC30]
 gi|257808754|gb|EEV37576.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC10]
          Length = 323

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 10/213 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTECASLFNVNHLTALRVGAAIECI 82
           L++ +  ++ +  ++ + ++ ++  GGK +R    +   A   + +   A+ + A+IE +
Sbjct: 18  LMEKSLKLKNKEVEQAILSMIHS--GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEML 75

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SLIHDD+  +D+   RR  PT+  ++    A+ AG+ L    F++++   +     +
Sbjct: 76  HTASLIHDDI--VDHADTRRKLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYASS----M 129

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           +S  M S +    L G L GQM    D  +         + KT  L   +C  GA  +  
Sbjct: 130 KSLQMNSRSMEKILAGEL-GQMSKRYDLSVTVEDYLENIRGKTAELFALSCFIGAYESGT 188

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           S     + R  GE +G+ FQ+ DD+LD  +D  
Sbjct: 189 SLRFANQAREIGEAIGLAFQIMDDVLDYSQDAA 221


>gi|150003776|ref|YP_001298520.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482]
 gi|254880992|ref|ZP_05253702.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA]
 gi|294777401|ref|ZP_06742852.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
 gi|319640000|ref|ZP_07994727.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A]
 gi|149932200|gb|ABR38898.1| octaprenyl-diphosphate synthase [Bacteroides vulgatus ATCC 8482]
 gi|254833785|gb|EET14094.1| octaprenyl-diphosphate synthase [Bacteroides sp. 4_3_47FAA]
 gi|294448469|gb|EFG17018.1| polyprenyl synthetase [Bacteroides vulgatus PC510]
 gi|317388278|gb|EFV69130.1| octaprenyl-diphosphate synthase [Bacteroides sp. 3_1_40A]
          Length = 324

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 10/226 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           KLQ+    ID   ++   +         N  L   + Y     GK +R  L    A LF 
Sbjct: 3   KLQQIKLPIDKEFEEF-RRLFDSSLQSSNSLLSEVLSYIKQRNGKMMRPILALLIAKLFG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             + + L    ++E +H  SL+HDD+  +D    RRG+ +V+  Y+   +++ G+ +L  
Sbjct: 62  EINDSTLHAALSLELLHTASLVHDDV--VDESDKRRGQSSVNAIYNNKVSVLVGDYMLAT 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           + +  +  +     ++ + L  +L+    +      Q+ +I      E   + + + KT 
Sbjct: 120 SLKHSAMTREITIVDLVACLGQNLSEGEII------QLANINASEFSEEVYYDVIRKKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   + E+GAI  HAS    +  R FGE +GI FQ+ DD+ D   
Sbjct: 174 ALFTASAEAGAISVHASDEMVKNARLFGEMIGIAFQIKDDIFDYYS 219


>gi|199598547|ref|ZP_03211964.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
 gi|199590589|gb|EDY98678.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
          Length = 325

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           L   L      + T +     + +     GGK +R       +   + +    + + AAI
Sbjct: 17  LASALTLIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDTDREKMIALAAAI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D    RR + T+  Q+   TA+ AG+ L    F++++   + L 
Sbjct: 77  ETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLAHYASSL- 133

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
              RS    S +    L+G L  QM       I           KTG L   +C  GA  
Sbjct: 134 ---RSIQQDSGSMEKILKGEL-DQMATRYQTQITINDYLKQVSGKTGQLFALSCFIGAYE 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           +  + N  +     G N+GI FQL DD+LD   D   L K
Sbjct: 190 SGGTTNFAKTAEKIGMNIGIAFQLLDDILDYTSDGETLGK 229


>gi|154251178|ref|YP_001412002.1| polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154155128|gb|ABS62345.1| Polyprenyl synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 339

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 11/226 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           ++LQ    +    +++ + +  +       +    A      GGK++R  L    + L  
Sbjct: 19  AQLQALVAKEMQAVNEFIRERMASDVPMVPEL---ASHLINSGGKRLRPMLTIAASRLCG 75

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N    +++ A +E +H  +L+HDD+  +D   +RRG  T  + +    +++ G+ LL  
Sbjct: 76  YNGTDHIKLAATVEFLHTATLLHDDV--VDESDMRRGAKTARMLWGNQASVLVGDFLLGR 133

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF+++   K+     +R+  +++   ++  +G +  Q+   +D    E     + + KT 
Sbjct: 134 AFKLMVETKS-----LRALEIIADAASVIAEGEVM-QLAAAKDTGTTEDAYLRVIQAKTA 187

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A E GA+++  + +E   L  +G NLGI FQL DD LD   
Sbjct: 188 ALFAAATEIGAVISEKNGSEAAALESYGRNLGIAFQLVDDALDYGG 233


>gi|284034155|ref|YP_003384086.1| trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836]
 gi|283813448|gb|ADB35287.1| Trans-hexaprenyltranstransferase [Kribbella flavida DSM 17836]
          Length = 340

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 19/237 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L S+++   +R++  L D   Q+ +   TQ    ++      + GGK+ R  LV   
Sbjct: 17  DEALESRVRAGLERVEQALRDS-TQSEAPFVTQAAQHVM------VAGGKRFRPLLVLLA 69

Query: 62  ASLFNVNHLTALRVGAAIE-CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A        T +   A +    H  +L HDD+  MD   +RRG  T +  +D   AI+AG
Sbjct: 70  AEFGPRPTATEVVDAAVVVELTHVATLHHDDV--MDEAALRRGSSTANAAWDNSVAILAG 127

Query: 121 NGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           + L   A ++++S   + ++   R+   L         G+  GQ                
Sbjct: 128 DWLFAKASDLVASLGPEAVRIQARTFGRLVEGQIRETLGVGEGQDP--------LAHYLS 179

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +   KTG+L+  +   GA  A A    +E LR FGE +G  FQLADD+LD   +  +
Sbjct: 180 VVADKTGSLIATSALFGARFAGAPAEVQEALRAFGEEIGTAFQLADDILDVTSESGQ 236


>gi|255693279|ref|ZP_05416954.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
 gi|260620958|gb|EEX43829.1| polyprenyl synthetase [Bacteroides finegoldii DSM 17565]
          Length = 324

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 8/182 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L++V   + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVARLYDVVRPSTLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  +       K+ L   + S L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLTGDYLLATSLVHAEQTKSHLIIRLVSLLGQDLADGELL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E+  F + + KT AL     ++ A+   A++ E E  R  GE +GI FQ+ DD+ D
Sbjct: 157 HSFSESVYFDVIRKKTAALFAACTKAAALSVDANEEEAEFARLLGEYIGICFQIKDDIFD 216

Query: 230 CE 231
             
Sbjct: 217 YF 218


>gi|312200053|ref|YP_004020114.1| polyprenyl synthetase [Frankia sp. EuI1c]
 gi|311231389|gb|ADP84244.1| Polyprenyl synthetase [Frankia sp. EuI1c]
          Length = 333

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 27/242 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L   ++     ++ +L D +    +         +  A R+    GGK+ R  +V  
Sbjct: 14  DPDLEIAVRAGLTGVERVLRDAIRSEFAF--------VTEASRHLTDAGGKRFRPMVVLL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      ++  AAIE  H  +L HDD+  MD   +RRG  + + ++    AI+ G
Sbjct: 66  AAHFADPAAPEVIQAAAAIELTHLSTLYHDDV--MDEAPLRRGAASANARWTNTVAILVG 123

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + L   A EI +    +    I +Q + +         +  GQ+ +      D+      
Sbjct: 124 DYLFARASEITADLGPE-ATRILAQTIAT---------LCEGQIRETVGPMPDDDPVEHY 173

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
             +   KT +L+  +   GA+M+ A     + L  FGE +G+ FQL+DD++D      D 
Sbjct: 174 LRVVTGKTASLIAASGRLGAMMSGADPVTADILATFGERIGVCFQLSDDIIDVSSATADS 233

Query: 235 PK 236
            K
Sbjct: 234 GK 235


>gi|254442381|ref|ZP_05055857.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
 gi|198256689|gb|EDY80997.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
          Length = 312

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 12/220 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-SLFNVNHLTALRVG 76
             LD  L++  S  + +  +    A      GGK+IR  L+               +R+ 
Sbjct: 2   KALDAFLMEQISQFEPEIREH---AAYSIDTGGKRIRPSLIFFSGWQNDGQVDEKLVRLA 58

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A +E +H  +L+HDD+  MD   IRR + TV  +Y+  TA++ G+ L ++A  +     T
Sbjct: 59  AVVETVHLATLVHDDI--MDEADIRRNRATVAKKYNNATAVLLGDALFSHAVYL----AT 112

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
           Q   N   + +      +    +L  Q +   D  +D    F +  +KT  L   +C  G
Sbjct: 113 QFPTNEVCRDIAVSMRQVCTGEIL--QTMQRGDPDLDMATYFRVIDLKTAELFRVSCHLG 170

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A +A    +  +    FG +LGI +Q+ DD+ D      K
Sbjct: 171 ARLAGFEDSYVQAAGAFGRHLGIAYQIYDDMTDLFGSQEK 210


>gi|315163581|gb|EFU07598.1| polyprenyl synthetase [Enterococcus faecalis TX1302]
          Length = 305

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
           N  + +A+   +  GGK +R       +      +   A  + A+IE +H  +L+HDD+ 
Sbjct: 9   NQEIQAAVHDMIHSGGKLLRPAYQLLFSYFGEQRDPKKATALAASIELLHTATLVHDDI- 67

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG PT+  ++   TA+  G+ L    F+++S   + LK    S  + S +  
Sbjct: 68  -VDEADTRRGLPTLRSRFGNSTAVYTGDYLFVCCFKLLSDYSSSLK----SIQLNSRSME 122

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             L G L GQM +  +  +   Q       KT  L   +C  GA  +  SQ   +R    
Sbjct: 123 KVLTGEL-GQMDNRYNFEVTIDQYLKNVSGKTAELFALSCFVGAYESGTSQRFAKRCGEI 181

Query: 214 GENLGIIFQLADDLLDCEE 232
           GEN+G+ FQ+ DD+LD  +
Sbjct: 182 GENIGLAFQIIDDILDYTQ 200


>gi|62959169|gb|AAY23692.1| farnesyl diphosphate synthase [Erythrobacter litoralis]
          Length = 145

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRGKPT H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDMPGMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E   +     +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQLVDLESEGKTDASVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|29165656|gb|AAH49211.1| PDSS1 protein [Homo sapiens]
          Length = 414

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 119 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 178

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 179 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 236

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 237 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 290

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 291 AYQYGKNVGIAFQLIDDVLDFTS 313


>gi|227497907|ref|ZP_03928087.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis
           DSM 15434]
 gi|226832673|gb|EEH65056.1| possible trans-hexaprenyltranstransferase [Actinomyces urogenitalis
           DSM 15434]
          Length = 368

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 18/241 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G  P    E   RI   L+ +  +    +              A  GGK++R  L   
Sbjct: 1   MIGTFPLDTPELEGRISPALEAVETRLLQVVNNADETINPPTSHLAEAGGKRLRPVLTLL 60

Query: 61  CASLFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            A L +            G A+E  H  +L HDD+  MD+  +RRG P+    +    AI
Sbjct: 61  TAQLGDPQTATGEKVRDAGVAVELTHIATLYHDDV--MDDAPLRRGAPSAQTVWGNSAAI 118

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
           + G+ L+  A +++++   +            L H    + +  GQ+ +     +     
Sbjct: 119 LTGDVLVARASQLVAALGPEAV----------LAHAKTFERLCMGQLHETLPRPVGTDPV 168

Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                +   KTG+L+  +   GA++  A +  +  +  FGE +G+ FQLADD++D   D 
Sbjct: 169 AHYIQVLADKTGSLIAVSARYGAMLTEAGEETERIVEEFGEKIGVAFQLADDVIDLTSDS 228

Query: 235 P 235
            
Sbjct: 229 E 229


>gi|149202083|ref|ZP_01879056.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035]
 gi|149144181|gb|EDM32212.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. TM1035]
          Length = 304

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 9/199 (4%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDD 91
           Q   RL  A+ Y+   GG +IR  ++   A     +    +    AA+E +HC SL+HDD
Sbjct: 37  QTPARLADALDYSTSPGGARIRPTILMSVALACGDDRPELSDAAAAALEIMHCASLVHDD 96

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP  D+  +RRGKP+VH  Y E  A++AG+ L+  +FEI++           + ++    
Sbjct: 97  LPCFDDADLRRGKPSVHRAYSEPLAVLAGDALIIMSFEILARVAECDAARANALILALAR 156

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            +    G+  GQ  + +        +    + KTGAL   A + GAI A    +E E   
Sbjct: 157 RSGMPNGICAGQGWESEPT----VDLEAYHRSKTGALFIAATQMGAIAAG---HEPEPWY 209

Query: 212 CFGENLGIIFQLADDLLDC 230
             G  +G  FQ+ADDL D 
Sbjct: 210 ELGARIGAAFQVADDLRDA 228


>gi|167042947|gb|ABZ07661.1| putative Polyprenyl synthetase [uncultured marine crenarchaeote
           HF4000_ANIW137N18]
          Length = 273

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 7/178 (3%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +       A+   +A+E IH ++L+HDD+  MDN  +R G PT H ++D   AI+AG+ L
Sbjct: 1   MLGGRQSDAIAAASAVEMIHNFTLVHDDI--MDNDEMRHGVPTTHKKFDMPLAILAGDVL 58

Query: 124 LTYAFEIISSPKTQLKDNIRSQLM--LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            + A+  ISS K++L  N  +QL+  LS T     +G +G              +   + 
Sbjct: 59  YSKAYHTISS-KSKLSSNYTTQLVSKLSKTCVEICEGQVGDIKFAENKRIPTGKEYIKMI 117

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           + KT  L   +C  GAI A   Q + + L  FG+NLGI+FQ+ DDLL    D    KK
Sbjct: 118 EKKTAVLFEVSCAMGAICAKRKQKDVKNLSSFGKNLGIVFQITDDLLGIIGDSKITKK 175


>gi|313205998|ref|YP_004045175.1| polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445314|gb|ADQ81669.1| Polyprenyl synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022311|gb|EFT35339.1| Octaprenyl-diphosphate synthase [Riemerella anatipestifer RA-YM]
 gi|325336561|gb|ADZ12835.1| Geranylgeranyl pyrophosphate synthase [Riemerella anatipestifer
           RA-GD]
          Length = 325

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 10/223 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
           ++E  + I   +     +    MQ++    L    R+ +   GK++R      CA L   
Sbjct: 5   VEEIKRPIGAEMKLFEQKFYESMQSKVP-LLDKVTRFIVTTKGKQMRPMFAFLCAKLVGD 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +    R  + IE IH  +L+HDD+  +D  + RR   +++  +    A++ G+ LL+ +
Sbjct: 64  VNEKTYRGASMIELIHTATLVHDDV--VDESFKRRNFFSINALWKNKIAVLVGDYLLSKS 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             + +  K     ++ S  +  ++    L      Q+   +   I E   + I + KT  
Sbjct: 122 VLLSTDNKDFDLLSVISTTIREMSEGELL------QLEKARKLDITEEVYYEIIRQKTAT 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           L+   CE G +     +   +++R FG   G+ FQ+ DDL D 
Sbjct: 176 LIAACCEIGVLSNGVDETMAKKMRDFGTYTGMAFQIKDDLFDY 218


>gi|312065737|ref|XP_003135935.1| polyprenyl synthetase [Loa loa]
 gi|307768907|gb|EFO28141.1| polyprenyl synthetase [Loa loa]
          Length = 370

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 107/254 (42%), Gaps = 34/254 (13%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASH--------MQTQHNDRLLSAI--RYALLGGKKIR 54
           LP  +++  + + + + ++L++ A +          +    +    +   Y   GGK  R
Sbjct: 23  LPGFVRDKLQALQSEIMEILVRNAENSSSLLSTCFSSSAFTKTFQEMAKYYFDQGGKLFR 82

Query: 55  SFLVTECASLFNVNHLTAL--------------RVGAAIECIHCYSLIHDDLPSMDNGYI 100
             +    A   N     ++              ++    E IH  SL+HDD+  +D   I
Sbjct: 83  PTICLLMARACNQFEPKSMLVDSGRETVTRNQYKIAVISEMIHTASLVHDDV--IDKADI 140

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  TV+  +    A++ G+ +L  A +++ S       ++ + ++  L     +    
Sbjct: 141 RRGSRTVNALWGNKMAVLVGDFILARATQVLCSIGRPSVISVMATIIEDLVKGEFM---- 196

Query: 161 GGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
             QM D  D    +   +       KT +L   +C+S A+++  S+ ++     +G++LG
Sbjct: 197 --QMNDGTDLNATQRFNKYMAKTYSKTASLFANSCKSAAMLSDVSEADELSAYEYGKSLG 254

Query: 219 IIFQLADDLLDCEE 232
           I FQ+ DDLLD   
Sbjct: 255 IAFQMIDDLLDYVS 268


>gi|50659086|ref|NP_055132.2| decaprenyl-diphosphate synthase subunit 1 [Homo sapiens]
 gi|74744657|sp|Q5T2R2|DPS1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           1; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 1; AltName: Full=Trans-prenyltransferase 1;
           Short=TPT 1
 gi|55959523|emb|CAI17280.1| trans-prenyltransferase (TPT) [Homo sapiens]
 gi|81157931|dbj|BAE48216.1| subunit 1 of decaprenyl diphosphate synthase [Homo sapiens]
 gi|119606490|gb|EAW86084.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_a
           [Homo sapiens]
          Length = 415

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 120 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 179

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 180 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 237

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 238 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 291

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 292 AYQYGKNVGIAFQLIDDVLDFTS 314


>gi|300857173|ref|YP_003782157.1| putative polyprenyl synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437288|gb|ADK17055.1| predicted polyprenyl synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 274

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 49  GGKKIRSFLVTECA-----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            GK++R  L    A      L +      +++  ++E IH  SLIHDD+  +D   +RRG
Sbjct: 44  PGKRLRPTLTFLSAGAISSELTSSAKHNLIQLSISLELIHSASLIHDDI--IDGDLLRRG 101

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           + T++  +    A++AG+ L + AF I S    +    +  ++  S++    L       
Sbjct: 102 QKTLNKTFGNKIAVLAGDALYSRAFTIFSDTLPREFAQVMGRVTESMSVAEIL------- 154

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             +  +   D    F I   KT + M   C  G  +A+A   E   L  +GENLG+ +Q+
Sbjct: 155 --NANNPSPDRETYFKIILGKTASFMSACCRLGGSIAYAPYEESNMLSKYGENLGMAYQI 212

Query: 224 ADDLLD 229
            DD +D
Sbjct: 213 LDDYID 218


>gi|323342013|ref|ZP_08082246.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464438|gb|EFY09631.1| geranyltranstransferase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 279

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 75/219 (34%), Positives = 108/219 (49%), Gaps = 10/219 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           K ID  LD +L         +       A+ Y+L+ GGK++R  L+      F  ++   
Sbjct: 3   KDIDARLDAILEYYPKTSVVR------EAMTYSLMSGGKRLRPRLLLAMLEDFGCDYKLG 56

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L    A+E +H YSL+HDDLP+MD+  +RR KPT H  + E  AI+AG+ LLT AF  +S
Sbjct: 57  LNPACALEMVHTYSLVHDDLPAMDDDDLRRFKPTNHKVFGEGVAILAGDALLTGAFTALS 116

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
              + L  ++  + +  L  N G  GM+ GQ LDI D       +     +KTG L   A
Sbjct: 117 Q--SSLDSDVVGKCLEILARNAGNNGMILGQELDIDDHIDHIDDLVACYNLKTGCLFAGA 174

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            E   ++A     +K      G  LG+ FQ  DDLL+  
Sbjct: 175 FEMAVVIAGKDSYQKLA-HDLGLTLGVAFQFQDDLLEVT 212


>gi|262198874|ref|YP_003270083.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365]
 gi|262082221|gb|ACY18190.1| Geranyltranstransferase [Haliangium ochraceum DSM 14365]
          Length = 355

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 11/232 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            L ++L      +   L D   + A+  +      +  A  + L LGGK +R   V   A
Sbjct: 30  DLAARLAALQSWVQRDLRDFEAELATLPKGARA--VQKAAHHLLELGGKHLRPMCVALAA 87

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +         ++  A+E +H  +L+HDD+  + +   RRG PT    Y    ++ AG+ 
Sbjct: 88  KMGTGFDAHGRQLAMAVELVHTATLLHDDVVDIGDS--RRGVPTARTIYGNAASVFAGDW 145

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL  A   I         +    ++  +     LQ    G + D       E   F + +
Sbjct: 146 LLVDALRRIRQTGLSDLLDRMLAIIEEMILAESLQLERRGSLGD------SEEVYFQVVE 199

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            KT AL  +A  +G       ++    L  +G +LG+ FQ+ DDLLD   D 
Sbjct: 200 GKTAALFRWAMYAGGRAGGLDEDACLALERYGRHLGVAFQVVDDLLDFSGDE 251


>gi|255513479|gb|EET89745.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 364

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%)

Query: 1   MNGGLPSKLQENS--KRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALL-GGKKIRSF 56
           ++  +   L E    +R D  +  LL +      ++   + ++    Y +  GGK+IR  
Sbjct: 19  VSASINKALWEYMSNERSDRNIKRLLGRGGFEYDSEAIQKSIIEPSWYLVEKGGKRIRPI 78

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           +          + +  +      E +H  +L+HDD+   D    RRG  +V+ +Y    A
Sbjct: 79  ITLLVIEALGKDPMDYIEFSMIPEILHTATLMHDDIE--DGSETRRGAQSVYKKYGMDIA 136

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----- 171
           +  G+ L  +  +++   K  L D ++ +++ +   ++   G+  GQ  DI         
Sbjct: 137 LNLGDFLFFFPIKVLLDSKK-LDDAVKYRILKAHEKHMIRIGL--GQATDIAWHRALTDI 193

Query: 172 --IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I E     +   KTG L+ FA E GAI+  A   + ERL  F   +G+ FQ+ DD+L+
Sbjct: 194 GKITEENYMRVAFDKTGVLLGFAAELGAIIGGAEDADVERLGKFASMIGVAFQIEDDILN 253

Query: 230 CE 231
             
Sbjct: 254 IT 255


>gi|221639691|ref|YP_002525953.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
           sphaeroides KD131]
 gi|332558710|ref|ZP_08413032.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
           sphaeroides WS8N]
 gi|221160472|gb|ACM01452.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
           sphaeroides KD131]
 gi|332276422|gb|EGJ21737.1| Geranylgeranyl pyrophosphate synthetase CrtE [Rhodobacter
           sphaeroides WS8N]
          Length = 278

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 9/200 (4%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHD 90
           ++   +L +A+ YA+  GG +IR  L+   A+    +          A+E IHC SL+HD
Sbjct: 11  SEAPSKLATALDYAVTPGGARIRPTLLLSVATACGDDRPALSDAAAVALELIHCASLVHD 70

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++             +    
Sbjct: 71  DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLARAAADQPQRALQLVTALA 130

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G+  GQ      E   +  +    + KTGAL   A + GAI A     E E  
Sbjct: 131 VRTGMPMGICAGQGW----ESESQINLSAYHRAKTGALFIAATQMGAIAAGY---EAEPW 183

Query: 211 RCFGENLGIIFQLADDLLDC 230
              G  +G  FQ+ADDL D 
Sbjct: 184 EELGARIGEAFQVADDLRDA 203


>gi|199597161|ref|ZP_03210593.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
 gi|258508675|ref|YP_003171426.1| geranyltranstransferase [Lactobacillus rhamnosus GG]
 gi|199591965|gb|EDZ00040.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
 gi|257148602|emb|CAR87575.1| Geranyltranstransferase [Lactobacillus rhamnosus GG]
 gi|259649981|dbj|BAI42143.1| geranyltranstransferase [Lactobacillus rhamnosus GG]
          Length = 283

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 119/234 (50%), Gaps = 17/234 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L +    I+  LD+ L        T  N  L +A+ Y++  GGK++R  L+    ++++ 
Sbjct: 5   LTDWQTAINHTLDEQLA-------TVVNPHLRAAMAYSVDAGGKRLRPLLLLSVVAMYDG 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL   AA+E +H YSLIHDDLP+MDN  +RRG+PT H Q+ E  AI+AG+ LLT A
Sbjct: 58  VVAEALPAAAALEFVHTYSLIHDDLPAMDNDDLRRGQPTNHKQFGEALAILAGDALLTDA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
           F I+S         +    +  L    G  GM+ GQ+LD+  E    D   +  + + KT
Sbjct: 118 FAILSQHYPGKGAEL----VQILAEAAGSSGMVAGQVLDMDGEQTQYDLATLKQMHQAKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GAL+      G++     + ++  L  F    G+ FQ+ DD+ D      +L K
Sbjct: 174 GALIQAGVAMGSLFVAIPEADQAALADFAAAFGLGFQIKDDINDVTKTTAELGK 227


>gi|255010272|ref|ZP_05282398.1| putative octaprenyl-diphosphate synthase [Bacteroides fragilis
           3_1_12]
 gi|313148068|ref|ZP_07810261.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12]
 gi|313136835|gb|EFR54195.1| octaprenyl-diphosphate synthase [Bacteroides fragilis 3_1_12]
          Length = 324

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVAKLYGEIKPATLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  +       +      + + L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLVGDFLLATSLVHAERTRNHDIIGVVACLGQDLAEGEIL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               ET  F + + KT AL     ++ A+    +  + E  R FGEN+GI FQ+ DD+ D
Sbjct: 157 REYSETIYFDVIRKKTAALFAACTKAAALSVEITDEKAEFARLFGENIGICFQIKDDIFD 216

Query: 230 CEE--DLPK 236
             E  ++ K
Sbjct: 217 YFESKEIGK 225


>gi|150009558|ref|YP_001304301.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256838290|ref|ZP_05543800.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp.
           D13]
 gi|149937982|gb|ABR44679.1| polyprenyl synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256739209|gb|EEU52533.1| heptaprenyl diphosphate synthase component II [Parabacteroides sp.
           D13]
          Length = 324

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 12/230 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
           ++  + +    +       + ++++   RL SAI   L   GK +R  LV   A +    
Sbjct: 5   RKIEEPVSAEFERFNKDFEASLRSET-TRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQV 63

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +     +E +H  +LIHDD+  +D    RRG P+++  +D   +++ G+ +L+ A 
Sbjct: 64  TDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL 121

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
                 ++    ++R   ++S       +G +  Q+   ++  +DE     + K KT  L
Sbjct: 122 -----IRSIQTGDLRIVGIISNLGRDLSEGEIK-QLETAEESILDENCYLQVIKKKTATL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
           +    E GAI + AS       R FGE LG  FQ+ DD+ D   E ++ K
Sbjct: 176 LSACTEIGAISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEANIGK 225


>gi|325567558|ref|ZP_08144225.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
           12755]
 gi|325158991|gb|EGC71137.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus ATCC
           12755]
          Length = 334

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTA 72
           I+  L  +      H+  ++ +     I +   GGK +R  L    A L + ++      
Sbjct: 19  IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 78

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            ++ A++E +H  +LIHDD+  +D+  +RR + TV  +Y +  A+  G+ L T  FE++ 
Sbjct: 79  TKIAASLEILHMATLIHDDI--IDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLI 136

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALM 189
                             T+   ++ +L G++  +   +               KT  L 
Sbjct: 137 ESMNGSP--------FLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELF 188

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             AC  GA         +ER    G N+GI FQ+ DD+LD   D    KK
Sbjct: 189 WLACLEGAHFGGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKK 238


>gi|313158272|gb|EFR57674.1| polyprenyl synthetase [Alistipes sp. HGB5]
          Length = 373

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           L    K +   L +   +      T   + L   +RYAL   GK IR  LV   A++ + 
Sbjct: 48  LDTIRKPVTAEL-EAFDEFVDRQFTAEGELLSDMLRYALSSRGKGIRPLLVLLSAAMNSP 106

Query: 68  NHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
               A           +E IH  SLIHDD+  +D   +RRGKP+ + ++    A+I G+ 
Sbjct: 107 VAEAAKGRRVHLAAMLVEMIHVASLIHDDV--IDEADMRRGKPSANARWQSHKAVILGDY 164

Query: 123 LLTYAFEI-ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
           +L     I ++S +  L  ++        +     +G +  Q    +   +       I 
Sbjct: 165 ILARNLSIGLTSGQFDLVTHV------CGSMAALCEGEVL-QSECAEKHTMTRQAYLDII 217

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             KT  L+  +  +GA+   ASQ +   +R FGE +G+ FQ+ DD+LD  
Sbjct: 218 YKKTACLIGVSASAGAMAVGASQQKVALMRRFGEAVGMAFQIQDDILDYT 267


>gi|229552897|ref|ZP_04441622.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258509306|ref|YP_003172057.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
 gi|258540493|ref|YP_003174992.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc
           705]
 gi|229313766|gb|EEN79739.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257149233|emb|CAR88206.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
 gi|257152169|emb|CAR91141.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus Lc
           705]
 gi|259650587|dbj|BAI42749.1| geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus GG]
          Length = 325

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           L   L      + T +     + +     GGK +R       +   + +    + + AAI
Sbjct: 17  LASALTLIEKQITTNNTPVAKAIMEMINGGGKLLRPAYCLLFSRFQDTDREKMIALAAAI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +LIHDD+  +D    RR + T+  Q+   TA+ AG+ L    F++++   + L 
Sbjct: 77  ETLHTATLIHDDI--IDKSPTRRNQVTIQKQFGPDTAVYAGDYLFVVCFKLLAHYASSL- 133

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
              RS    S +    L+G L  QM       I           KTG L   +C  GA  
Sbjct: 134 ---RSIQQDSGSMEKILKGEL-DQMATRYQTQITINDYLKQVSGKTGQLFALSCFVGAYE 189

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           +  + N  +     G N+GI FQL DD+LD   D   L K
Sbjct: 190 SGGTTNFAKTAEKIGMNIGIAFQLLDDILDYTSDGETLGK 229


>gi|312143242|ref|YP_003994688.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903893|gb|ADQ14334.1| Polyprenyl synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 330

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 11/215 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L +      T H + + SAI   +  GGKK+R FL+   AS  + +    L +G++IE +
Sbjct: 15  LDKNIIEKTTTHREIINSAIVDLIDGGGKKLRPFLMFLAASFGDYDKKELLDLGSSIEIL 74

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+HDD+  +D+  +RRGK T   ++ +  A+  G+ L++  F+I+     +     
Sbjct: 75  HMASLLHDDI--IDDADLRRGKVTAQKRFGKNEAVFIGDFLISRTFDILFEYLDK----- 127

Query: 143 RSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
             + ++ +  N+ L       Q     D  I     +   + KT  L   +   GA ++ 
Sbjct: 128 --ETLIKMNKNLRLICEGEIEQAEKKYDFNISIRDYYRRIRHKTALLFAISSYLGAYVSG 185

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               +   L   G  +G+ FQ+ DD+LD   +  K
Sbjct: 186 IRGKKLNILYKLGLEIGMAFQIQDDILDFNGEQAK 220


>gi|329935839|ref|ZP_08285642.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304682|gb|EGG48557.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
          Length = 341

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 11/217 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L +          DR+    RYALL  GK +R  L+   A     +    +    A+E +
Sbjct: 24  LRRELDLRWPAGGDRMHEIARYALLAPGKLLRPLLLVASAEATGGSRSEVVPAALAVEYL 83

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KTQLKDN 141
           H  SLIHDD+  +D   +RRG+ +VH  Y    AI  G+ LL   F  ++      + D 
Sbjct: 84  HVASLIHDDV--IDGDDLRRGQSSVHALYGVPDAIATGDALLFRVFSAVAECVALGVPDT 141

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-----DETQVFMIQKMKTGALMCFACESG 196
                +  L    G   +  GQ+ + +                +  +KTGAL+  AC +G
Sbjct: 142 AVLAAIRVLAEAGG--DLCRGQVQEAELAAAWPGAGGLDAYREMASLKTGALLRAACRAG 199

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A+++  S  E E +  F  +LG+ FQ+ DDLL    D
Sbjct: 200 ALLSGGSPEETEAVTVFAGHLGLAFQMYDDLLPYLAD 236


>gi|309388901|gb|ADO76781.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
          Length = 319

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 11/226 (4%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
            +  ++I   L++ +L+  +  +   N+ +   I+    GGKK+R FL+   AS  + + 
Sbjct: 5   DKFYQKICNKLNENILEITNSKRRIINEAVSDLIK---GGGKKLRPFLMFLAASFGDYDQ 61

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L++G+ IE +H  SL+HDD+  +DN  +RRGK T   ++ +  A+  G+ LL+ +F 
Sbjct: 62  EKLLQLGSGIELLHMSSLLHDDV--IDNAKLRRGKKTAQHKFGKEEAVFIGDFLLSRSFN 119

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I      +      ++ +  L            Q     D  I     +   + KT    
Sbjct: 120 IFFKYLDKSTLGKMNKNVSLLCEGEI------EQSEKKFDLEISMRDYYRRIRHKTALFF 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   GA ++     +   L   G  +G+ FQ+ DDLLD E +  
Sbjct: 174 ALSSYLGAYVSGVRGKKLNLLYKLGLEIGMAFQIKDDLLDFEGEEE 219


>gi|221195086|ref|ZP_03568142.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium
           rimae ATCC 49626]
 gi|221184989|gb|EEE17380.1| bifunctional short chain isoprenyl diphosphate synthase [Atopobium
           rimae ATCC 49626]
          Length = 365

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 95/252 (37%), Gaps = 25/252 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-------------LLSAIR-YALLG 49
                L     R++  LD  L    S    Q  +              L   +R ++  G
Sbjct: 2   DFIDYLTSVRPRVEKELDAGLPIPVSQKHLQEAEPAACNSVVADLNTYLYQPLRGFSATG 61

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R  LV       + +   AL V  AIE     +LIHDD+   D   +RRG+P ++ 
Sbjct: 62  GKRVRPALVLLATQAVHGDVEAALPVACAIEDFQSAALIHDDIA--DKSELRRGEPCLYR 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--- 166
           +     AI  G+  L +    I    T  +    ++L L        +  L GQ LD   
Sbjct: 120 RLGTGLAINVGDAALVHTIGRICHGNTYDEA---TRLRLIDALISMQEHTLEGQALDLGW 176

Query: 167 --IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                  I   +   +   KT      +    GAI+   +  ++  L+ FG   G+ FQL
Sbjct: 177 TQENRWDITPDEYLFMATSKTAYYSAAYPLLCGAIVGGGTAEQRSALKAFGLKAGLAFQL 236

Query: 224 ADDLLDCEEDLP 235
            DDLL+   D  
Sbjct: 237 QDDLLNLVGDAK 248


>gi|325289830|ref|YP_004266011.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965231|gb|ADY56010.1| Trans-hexaprenyltranstransferase [Syntrophobotulus glycolicus DSM
           8271]
          Length = 322

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 17/220 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L S+++ +  +++  LD LL           +  L     Y L  GGK++R         
Sbjct: 6   LFSEIKADLTKVEKELDKLLA--------VDDPILSKTCVYLLQAGGKRMRPGFTLLSGR 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            FN +    L V  AIE IH  +L+HDD+  +D    RRG+PT+   +    ++  G+ L
Sbjct: 58  FFNYDFKKILPVAMAIELIHMATLVHDDV--VDASLTRRGRPTLAAGWGNTVSVATGDFL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A E+I        D+     +L+       QG +  Q+    D   +  Q +   + 
Sbjct: 116 FAKALEMIGKI-----DDPGVAKILADVSVEMCQGEI-QQIWSAFDVKQNFKQYYYRIRR 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           KT  L+  +C  GA+++  S      L  +G  LGI FQ+
Sbjct: 170 KTALLIGLSCRLGAMVSDGSLRHMWLLETYGHCLGIAFQI 209


>gi|306841490|ref|ZP_07474190.1| geranyltranstransferase [Brucella sp. BO2]
 gi|306288454|gb|EFM59810.1| geranyltranstransferase [Brucella sp. BO2]
          Length = 229

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 92/165 (55%), Positives = 120/165 (72%), Gaps = 2/165 (1%)

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LRV AA+ECIHCYSL+HDDLP+MD+  +RRG+PTVH  +DE  AI+AG+ LLTYAF+II+
Sbjct: 2   LRVAAALECIHCYSLVHDDLPAMDDDDLRRGQPTVHRAFDEAAAILAGDSLLTYAFDIIA 61

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
           S +T+L    R +L+ +LT   GL GM GGQ LD+  E    DE  +  +Q MKTGAL+ 
Sbjct: 62  SDETELDATTRIKLVCALTRASGLGGMAGGQALDLMAETRKPDEAGIITLQAMKTGALIR 121

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           FACE+GAI+A AS+ ++ER+  FG  +G+ FQLADDLLD   D  
Sbjct: 122 FACEAGAIIAGASREDRERMAEFGSAIGLAFQLADDLLDVTADAG 166


>gi|295106544|emb|CBL04087.1| farnesyl-diphosphate synthase /geranylgeranyl-diphosphate synthase
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 349

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 9/234 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTEC 61
                 L   + ++ T+++  + Q +       +  L   +  Y+  GGK+ R  +    
Sbjct: 16  ETFEEYLTRYAAQVGTLVNSYIPQGS---HPDMDRYLYEPLNAYSQNGGKRHRPLICFAA 72

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +   A    AAIE  H  +LIHDD+   D   +RRG+P +H+      AI  G+
Sbjct: 73  CRAVGGDMARATSAAAAIEHFHTAALIHDDIA--DEAELRRGEPCLHLTEGMGLAINMGD 130

Query: 122 GLLTYA-FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFM 179
             L+     +I+ P       +R    L       ++G            + I      +
Sbjct: 131 LALSLVNGTVINDPLLDDATKVRVVNELIEMTRRTIEGQALDIGWARDGRYDITPEDYLV 190

Query: 180 IQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KT           GAI+   ++ E E LR +G + G+ FQ+ DDLL+   
Sbjct: 191 MATHKTAHYSGAVPLAIGAIIGGGTEAEIEALRNYGLDTGLAFQIQDDLLNLIG 244


>gi|257871265|ref|ZP_05650918.1| polyprenyl synthetase [Enterococcus gallinarum EG2]
 gi|257805429|gb|EEV34251.1| polyprenyl synthetase [Enterococcus gallinarum EG2]
          Length = 326

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---NVNHLTA 72
           I+  L  +       +  ++ +     + +   GGK +R  L    A L    +  +   
Sbjct: 11  IEQRLKTVCSIIEERVTVRNKEIQDVLVDFTYSGGKMLRPALFFLFADLGEPIDERNDQL 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            ++ A++E +H  +LIHDD+  +D+  +RRG+ TV  +Y +  A+  G+ L T  FE++ 
Sbjct: 71  TKIAASLEILHMATLIHDDI--IDDSPLRRGRITVQAKYGKDIAVYTGDLLFTQFFELLI 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDE--TQVFMIQKMKTGALM 189
                      S  + +      ++ +L G++  +   + IDE           KT  L 
Sbjct: 129 ESMNG------SHFLATNAQA--MKRLLLGELDQMHTRYNIDESIADYLQSINGKTAELF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             AC  GA         +ER    G N+GI FQ+ DD+LD   D    KK
Sbjct: 181 WLACIEGAHFGGLDLENQERAGEIGRNIGIAFQVFDDILDYTADSGTLKK 230


>gi|88811177|ref|ZP_01126433.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231]
 gi|88791716|gb|EAR22827.1| Polyprenyl synthetase [Nitrococcus mobilis Nb-231]
          Length = 328

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 4/213 (1%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           I   LD  L +    + +    + +  ++Y +  GK+IR  LV             AL  
Sbjct: 10  IRARLDKELTRQIPKLFSAFGPQQIKTVQYIINNGKRIRGCLVCLVNHALGGQIADALPR 69

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             AIECI   SLIHDD   +DN  IRR +P          A++ G+ +   A + +    
Sbjct: 70  AVAIECIQAASLIHDD--YVDNDTIRRKRPATWTVEGPRRAVLLGDMMFATAIQSMVEL- 126

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-VFMIQKMKTGALMCFACE 194
           +       ++ + ++ +    + +L  +    +   ++E      I  +KTGAL   AC+
Sbjct: 127 SNADGIAVTRAIATVANGAYQEPLLLAKPAAGRALDLNEQTIYERIIYLKTGALFGAACQ 186

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            GAI A A +        FG   G  +Q+ADDL
Sbjct: 187 LGAIAAGAPEERCAHAYAFGARTGEAYQIADDL 219


>gi|109088459|ref|XP_001102166.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 isoform 1
           [Macaca mulatta]
          Length = 415

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 120 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVH 179

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 180 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 237

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 238 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 291

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 292 AYQYGKNVGIAFQLIDDVLDFTS 314


>gi|111220513|ref|YP_711307.1| heptaprenyl diphosphate synthase component II [Frankia alni ACN14a]
 gi|111148045|emb|CAJ59711.1| Heptaprenyl diphosphate synthase component II (HEPPP synthase
           subunit 2) [Frankia alni ACN14a]
          Length = 296

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 16/199 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +    R+ +  GGK+ R  +V   A   + +    +    AIE  H  +L HDD+  MD 
Sbjct: 1   MTETSRHLVDAGGKRFRPIVVLLAAQFADPHAPGVVPAAVAIELTHLSTLYHDDV--MDE 58

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG  + + ++    AI+ G+ L   A +I +         I ++ + +        
Sbjct: 59  APRRRGAASANARWTNTVAILTGDYLFARASDITADLG-PAATRILARTIAT-------- 109

Query: 158 GMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ+ +      D+        +   KT +L+  +   GA++A A     + L  FG
Sbjct: 110 -LCEGQIRETVGPAPDQDPVEHYLRVVTEKTASLIATSGRLGAMLAGADPVTVDTLATFG 168

Query: 215 ENLGIIFQLADDLLDCEED 233
           E  G+ FQL+DD++D   D
Sbjct: 169 ELFGVAFQLSDDIIDVASD 187


>gi|302524796|ref|ZP_07277138.1| farnesyl diphosphate synthase [Streptomyces sp. AA4]
 gi|302433691|gb|EFL05507.1| farnesyl diphosphate synthase [Streptomyces sp. AA4]
          Length = 340

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 15/186 (8%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K +R  LV  CA     +   A+    A+E  H +SL+HDD+  MD    RR +PT    
Sbjct: 63  KALRPALVLLCAEACGGDPEDAVPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAWTV 120

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +    A++AG+ LL  AF+++S       D   +  +LS      +  +L GQ  D+  E
Sbjct: 121 FGTGQAVLAGDSLLALAFDVLS------ADGPAAARLLSTA----VLDLLHGQHEDLAFE 170

Query: 171 FIDETQVFMIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              + +V    +M   KT AL+  AC  G ++        ER   FG +LG+ FQ  DDL
Sbjct: 171 QRTDVEVAECVRMAQGKTAALLSAACTLGVLVVGGRGEHVERFGRFGRSLGLAFQHVDDL 230

Query: 228 LDCEED 233
           L    D
Sbjct: 231 LGIWGD 236


>gi|62959173|gb|AAY23694.1| farnesyl diphosphate synthase [Roseobacter denitrificans OCh 114]
          Length = 145

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP+MDN  +RRGKP  H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDLPAMDNDDLRRGKPANHKVYGEDIAILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E    +    +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|288931665|ref|YP_003435725.1| polyprenyl synthetase [Ferroglobus placidus DSM 10642]
 gi|288893913|gb|ADC65450.1| Polyprenyl synthetase [Ferroglobus placidus DSM 10642]
          Length = 301

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 22/224 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            E  + I+  L +LL +           ++  A+++ +  GGK+ R  +V   A L   +
Sbjct: 5   WEEYRTIERALKELLDREVII------PKIKKALKHLIEAGGKRTRPIIVLLSAKLAGGD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L +  A+E IH  SL HDD+  +D G  RR K T++++YD+  AI+ G+ L++ + 
Sbjct: 59  EKEILDMALAVELIHTASLAHDDV--IDRGVKRRNKETLNVKYDDSLAILVGDWLISKSV 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTG 186
           ++ +     +  +     ML          M  G++LD+    E  DE   F   + KT 
Sbjct: 117 QLTAKYGYDIVRDFAKTGML----------MSEGEVLDVYSTKEKFDEEDYFKCIEYKTA 166

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AL  ++ ++        +   E+L  +G NLGI +QL DDLL+ 
Sbjct: 167 ALFAYSAKNAYQYFSQDEG-VEKLFQYGLNLGIAYQLVDDLLEY 209


>gi|325964291|ref|YP_004242197.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323470378|gb|ADX74063.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 366

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 22/234 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   +  N  R++  L + +  +   +    +  L+ A      GGK+IR  L   C
Sbjct: 44  DAELGPAITNNLARVEKKLREAIANSDP-LADATSRHLVEA------GGKRIRPLLTLLC 96

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L + +    ++    +E  H  +L HDD+  MD+   RRG PT H  +    A++ G+
Sbjct: 97  AHLGDASLPAVVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAVLTGD 154

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            +   A  ++S   +      R+  + + T       +  GQ+ +      DE       
Sbjct: 155 LIFARASILVSELGS------RALGIQARTFE----RLCLGQLHETVGPRPDEDPIEHYL 204

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   KTG+L+  + + GAI A A    +  L  +GE +G+ FQLADD++D   
Sbjct: 205 SVIADKTGSLVAASGQLGAIFAEADPAFEPVLVEYGEKVGVAFQLADDVIDVTG 258


>gi|297155996|gb|ADI05708.1| polyprenyl diphosphate synthase [Streptomyces bingchenggensis
           BCW-1]
          Length = 365

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A +        +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 72  GGKAVRPALALLSAEVAGQAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T      R+   L+      + G       + +
Sbjct: 130 KVHGPAQAILVGDALFALAGEILLELGTVEAG--RATRRLTSATRKLIDGQAQDISYEHR 187

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 188 -ERVTVAECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLL 246

Query: 229 DCEED 233
               D
Sbjct: 247 GIWGD 251


>gi|299115852|emb|CBN74415.1| geranyl-diphosphate synthase [Ectocarpus siliculosus]
          Length = 513

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 26/236 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA--LLGGKKIRSFLVTECASLFNVNHLT 71
           + +   L  L     S + T+H   L +A +Y   L GGKKIR  +V   +   N N   
Sbjct: 186 ELVSAELAGLSDGIKSLIGTEHAV-LNAAAKYFFELDGGKKIRPTMVILMSQACNSNSQQ 244

Query: 72  A---------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
                           LR+    E IH  SL HDD+  +D    RRG P+V+  +    A
Sbjct: 245 VRPDVQPGTELVNPLQLRLAEITEMIHAASLFHDDV--IDEADTRRGVPSVNKVFGNKLA 302

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           I+AG+ LL  +   ++  ++     + S  +  L     L      QM   +D       
Sbjct: 303 ILAGDFLLARSSMSLARLRSLESVELMSAAIEHLVKGEVL------QMRPTEDGGGAFEY 356

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                  KTG+LM  +C++ A++       +E    +G+ +G+ FQL DD+LD E 
Sbjct: 357 YVRKNYYKTGSLMANSCKASAVLGQHDLEVQEVAFEYGKRVGLAFQLVDDILDFEG 412


>gi|257453962|ref|ZP_05619238.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60]
 gi|257448627|gb|EEV23594.1| solanesyl diphosphate synthase [Enhydrobacter aerosaccus SK60]
          Length = 347

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 17/231 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL----LGGKKIRSFLVTECASLFNVNH 69
           ++I +I+ D        +    + ++   +  +      GGK++R  +   C+ + N   
Sbjct: 29  QQIQSIIADDFEIMDKQVYGSLSSKVKLVMSVSQHVINAGGKRMRPLISLLCSRICNDQP 88

Query: 70  -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A+ +GA  E +H  +L+HDD+  +D   +RRGKPT +  +D  TA++ G+ L+  +F
Sbjct: 89  SQAAMHLGAITEMLHTATLVHDDV--IDASGMRRGKPTANATWDNATAVLVGDYLIARSF 146

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            ++    +     + S     +     L      Q+    D    E     I   KT  L
Sbjct: 147 NLLVGFGSLPLLQLFSDGTCDIAEGEVL------QLQHQHDPKATEADYMKIIDGKTSRL 200

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
              A +  AI+        +    FG++ G  FQ+ DD+LD   D   L K
Sbjct: 201 FMMASQGVAIL-ENRPEYNDAFAKFGQHFGNAFQIIDDVLDFVGDSEVLGK 250


>gi|133777361|gb|AAI07275.2| Pdss1 protein [Mus musculus]
          Length = 385

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  A         +    E IH  +L+H
Sbjct: 90  ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 149

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 150 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIED 207

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 208 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 261

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 262 AYQYGKNVGIAFQLIDDVLDFTS 284


>gi|133777358|gb|AAI07274.2| Pdss1 protein [Mus musculus]
          Length = 383

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  A         +    E IH  +L+H
Sbjct: 88  ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 147

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 148 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIED 205

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 206 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 259

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 260 AYQYGKNVGIAFQLIDDVLDFTS 282


>gi|220913570|ref|YP_002488879.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
 gi|219860448|gb|ACL40790.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
          Length = 366

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 22/224 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           N  R++  L + +  +   +    +  L+ A      GGK+IR  L   CA L + +   
Sbjct: 54  NLARVEKKLREAIANSDP-LADATSRHLVEA------GGKRIRPLLTLLCAHLGDASLPA 106

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            ++    +E  H  +L HDD+  MD+   RRG PT H  +    A++ G+ +   A  ++
Sbjct: 107 VVQAAVVVELTHLATLYHDDV--MDSAPFRRGAPTAHEVWGNSVAVLTGDLIFARASILV 164

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGAL 188
           S          R+  + + T       +  GQ+ +      DE        +   KTG+L
Sbjct: 165 SELGG------RALGIQARTFE----RLCLGQLHETVGPRPDEDPIEHYLSVIADKTGSL 214

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  + + GAI + A +  ++ L  +GE +G+ FQLADD++D   
Sbjct: 215 VAASGQFGAIFSGADEAYEDVLVEYGEKVGVAFQLADDVIDVTG 258


>gi|302330014|gb|ADL20208.1| Putative polyprenyldiphosphate synthase component [Corynebacterium
           pseudotuberculosis 1002]
          Length = 339

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 36/244 (14%)

Query: 2   NGGLPSKLQENSKRIDTIL-------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR 54
           N  L   +      ++ +L       +D +++   H+                 GGK+ R
Sbjct: 20  NPALNEDISAGMTCVEELLQKELCVGEDFIVEKVKHLAN--------------AGGKRFR 65

Query: 55  SFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
                  +   +       ++    +E  H  +L HDD+  MD    RRG  + + +++ 
Sbjct: 66  PMFALLASQYGDHPVSEDVIKAAVVVEMTHLATLYHDDV--MDEAAKRRGVESANARWNN 123

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEF 171
             AI+AG+ LL +   +++   T          +   +   G   ++ GQM +     E 
Sbjct: 124 SVAILAGDILLAHVSRLMADLGTD--------TVRHFSETFG--DLVTGQMRETIGVGEG 173

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                   + + KTG L+  A   GA+ + A+ +  E LR +G  +G++FQ+ DD++D  
Sbjct: 174 DPIEHYMAVIREKTGVLIASAGYLGALHSGATADHIEALRAYGAAIGMVFQIVDDIIDIF 233

Query: 232 EDLP 235
            D  
Sbjct: 234 SDSE 237


>gi|228473247|ref|ZP_04058002.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275397|gb|EEK14189.1| polyprenyl synthetase [Capnocytophaga gingivalis ATCC 33624]
          Length = 327

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 14/233 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-- 65
           +++  + I   +     +    M ++    L     Y +   GK++R   V   A L   
Sbjct: 5   IEQIKEPIAQEMAAFEDKFRDSMSSRVA-LLNRITHYIVNRKGKQMRPMFVFLVAKLVSE 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            +      R  A IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+
Sbjct: 64  GLVQERTYRGAAVIELIHTATLVHDDV--VDDSNKRRGFFSINALWKNKIAVLVGDYLLS 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
               ++ S      D +R   ++S+      +G L  QM   +   I E   + I + KT
Sbjct: 122 KG--LLLSIDNGDFDLLR---IISVAVREMSEGELL-QMEKARRLDITEEVYYEIIRQKT 175

Query: 186 GALMCFACESGA-IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
             L+   C  GA  +A  +    E++R FGE +G+ FQ+ DDL D  E+ + K
Sbjct: 176 ATLIAACCAMGACSVAPENSQVIEQMRLFGEYVGMAFQIKDDLFDYTEEAIGK 228


>gi|302341992|ref|YP_003806521.1| polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638605|gb|ADK83927.1| Polyprenyl synthetase [Desulfarculus baarsii DSM 2075]
          Length = 348

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 23/233 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           G + +++ E +   D  L   L      ++   +  + S       GGK++R  L    A
Sbjct: 29  GQVKARVLELAAPADEALGQTLSCHVPFIKEVSDYIIFS-------GGKRLRPVLFMLAA 81

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                      R  A  E +H  +L+HDD+  +D   +RRG+P     Y     I+ G+ 
Sbjct: 82  QAVGGAGD--FRRAAIFEYLHAATLLHDDV--IDEAGLRRGRPAARKLYGNEAVILVGDF 137

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFM 179
           L + ++ + +       D+   Q +   T       M  GQ+L+     D  +   +   
Sbjct: 138 LFSKSYSLAAEE----PDHRFIQALTDCTT-----HMAEGQVLELLRTDDLELSRQKYLE 188

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KT  L+  AC+ GAI A AS   +  L  +G +LG+ FQL DD LD   
Sbjct: 189 VIVAKTAVLLAAACQMGAIHAGASPEVENALYRYGLSLGVAFQLVDDALDYVG 241


>gi|257875966|ref|ZP_05655619.1| polyprenyl synthetase [Enterococcus casseliflavus EC20]
 gi|257810132|gb|EEV38952.1| polyprenyl synthetase [Enterococcus casseliflavus EC20]
          Length = 326

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTA 72
           I+  L  +      H+  ++ +     I +   GGK +R  L    A L + ++      
Sbjct: 11  IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            ++ A++E +H  +LIHDD+  +D+  +RR + TV  +Y +  A+  G+ L T  FE++ 
Sbjct: 71  TKIAASLEILHMATLIHDDI--IDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLI 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALM 189
                             T+   ++ +L G++  +   +               KT  L 
Sbjct: 129 ESMNGSP--------FLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             AC  GA         +ER    G N+GI FQ+ DD+LD   D    KK
Sbjct: 181 WLACLEGAHFGGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKK 230


>gi|329116532|ref|ZP_08245249.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020]
 gi|326906937|gb|EGE53851.1| polyprenyl synthetase [Streptococcus parauberis NCFD 2020]
          Length = 326

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 15/233 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           +K  E  K ID ++ +L+ Q A+    +++D   + +  +  GGK +R       +   +
Sbjct: 6   NKFPEIQKEIDAVV-ELIGQRAN---VRNSDIKAAIVDLSTAGGKYLRPAFFFFFSQFGD 61

Query: 67  ---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N     ++ A++E +H  +LIHDD+  +D+  +RRG+ T+  Q+ +  A+  G+ L
Sbjct: 62  QEQKNRDQLRQIAASLEILHMATLIHDDV--IDDSPLRRGQKTIQTQFGKDVAVYTGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T  FE+I               + +      L G L  QM    ++  D          
Sbjct: 120 FTIFFELILESMQDSP----YMTINAKAMKQILIGELE-QMELYFNQEQDVESYLTAISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KT  L   A + GA  A ASQ+        G ++G+ FQ+ DD+LD   D PK
Sbjct: 175 KTAELFQLASQEGAYFAGASQDVVSLAGRIGHHIGMTFQILDDILDYTAD-PK 226


>gi|118602494|ref|YP_903709.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567433|gb|ABL02238.1| farnesyl-diphosphate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 284

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 16/221 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL 73
           R++  LD  L    S         L  AIRY+ L  GK+ R  L    A++FN N     
Sbjct: 9   RVNAKLDQHLSAQGS---------LAKAIRYSTLANGKRFRPILAYCVANIFNTNLNLVD 59

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E IH YSLIHDDLP+MD+  IR  +P  H ++ E  AI+AG+GL   AFE++ +
Sbjct: 60  SSSCAVEFIHTYSLIHDDLPAMDDDDIRHNQPVCHKRFGEAQAILAGDGLQALAFEVLVN 119

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCF 191
               +  +I+ +L+ SLTH      M+ GQ +D  I  + ++   +  + + KTGAL+  
Sbjct: 120 DDL-ISADIKIELLKSLTHAS--FEMVEGQAIDLSIIAKQVNIATLETMHRKKTGALLSC 176

Query: 192 ACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A   GAI++   +  +   L  F +++G+ +Q+ DD+LD E
Sbjct: 177 AVNLGAIVSKMCNNKDSVILNTFSKDIGLAYQIQDDVLDIE 217


>gi|262383148|ref|ZP_06076285.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B]
 gi|301311752|ref|ZP_07217677.1| polyprenyl synthetase [Bacteroides sp. 20_3]
 gi|262296026|gb|EEY83957.1| polyprenyl synthetase [Bacteroides sp. 2_1_33B]
 gi|300830312|gb|EFK60957.1| polyprenyl synthetase [Bacteroides sp. 20_3]
          Length = 324

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 12/230 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
           ++  + +    +       + ++++   RL SAI   L   GK +R  LV   A +    
Sbjct: 5   RKIEEPVSAEFERFNKDFEASLRSET-TRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQV 63

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +     +E +H  +LIHDD+  +D    RRG P+++  +D   +++ G+ +L+ A 
Sbjct: 64  TDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL 121

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
                 ++    ++R   ++S       +G +  Q+   ++  +DE     + K KT  L
Sbjct: 122 -----IRSIQTGDLRIVGIISNLGRDLSEGEIK-QLETAEESILDENCYLQVIKKKTATL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
           +    E GAI + AS       R FGE LG  FQ+ DD+ D   E ++ K
Sbjct: 176 LSACTEIGAISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEANIGK 225


>gi|298373963|ref|ZP_06983921.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
 gi|298268331|gb|EFI09986.1| polyprenyl synthetase [Bacteroides sp. 3_1_19]
          Length = 324

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 12/230 (5%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN 68
           ++  + +    +       + ++++   RL SAI   L   GK +R  LV   A +    
Sbjct: 5   RKIEEPVSAEFERFNKDFEASLRSET-TRLQSAIDVILNSTGKHVRPLLVLLTAKVCGQV 63

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +     +E +H  +LIHDD+  +D    RRG P+++  +D   +++ G+ +L+ A 
Sbjct: 64  TDNTINSAVLLELLHTATLIHDDV--IDETKQRRGVPSLNAIFDNRISVLVGDYVLSTAL 121

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
                 ++    ++R   ++S       +G +  Q+   ++  +DE     + K KT  L
Sbjct: 122 -----IRSIQTGDLRIVGIISNLGRDLSEGEIK-QLETAEESILDENCYLQVIKKKTATL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
           +    E GAI + AS       R FGE LG  FQ+ DD+ D   E ++ K
Sbjct: 176 LSACTEIGAISSGASAEVIALCREFGEYLGYCFQIKDDIFDYFKEANIGK 225


>gi|209548129|ref|YP_002280046.1| polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533885|gb|ACI53820.1| Polyprenyl synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 338

 Score =  161 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS    I  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSSAACIIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 169 NMETTEDDYLSVIRAKTAALFAAAAEVGPIVAEAGKSGRNALKSYGMNLGLAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGKAADLGK 239


>gi|294792178|ref|ZP_06757326.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27]
 gi|294457408|gb|EFG25770.1| octaprenyl-diphosphate synthase [Veillonella sp. 6_1_27]
          Length = 323

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E  +RI   L+ +    AS   T   D   L+  +  +  GGK++R+ L    A+     
Sbjct: 8   EIMERIALDLERVEESLASSFNTGAEDFNALIRPL--SAAGGKRLRAQLCLLIANAGTSI 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +++  A+E +H  +LIHDD+  +D   IRRG+ T+H+      AI++G+ L   AF
Sbjct: 66  ERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKT 185
           +I+S        N++   + S      +  ++ G+ + ++D +       +     + KT
Sbjct: 124 KIVSEMT-----NMKYLQVFSH----IITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKT 174

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              M    E G ++    ++E   L+ +G  LG+ FQ+ DD++D 
Sbjct: 175 ADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITDDIMDY 219


>gi|256379027|ref|YP_003102687.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255923330|gb|ACU38841.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 346

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A         AL    A+E +H +SL+HDD+  MD    RR +PT   
Sbjct: 62  GKAIRPVLVLLAARAVGGRAEDALPAAVAVELVHNFSLLHDDV--MDGDATRRHRPTAWA 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++AG+ L+T A ++++             L      +  +Q +L GQ  D+  
Sbjct: 120 VFGVNAAVLAGDALMTLALDVLAGSGHPAAARGIVLL------SAAVQELLDGQSSDLGF 173

Query: 170 EFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E  DE    +   + + KT AL+   C  GA+    S ++   L  FGE  G+ FQ  DD
Sbjct: 174 EERDEVGVAECVRMAEGKTAALLGACCSLGALFGGGSADQVGELGLFGERTGLAFQFVDD 233

Query: 227 LLDCEED 233
           LL    D
Sbjct: 234 LLGIWGD 240


>gi|328958756|ref|YP_004376142.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp.
           17-4]
 gi|328675080|gb|AEB31126.1| heptaprenyl diphosphate synthase component II [Carnobacterium sp.
           17-4]
          Length = 326

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 21/231 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECA 62
            L S+L +  + ID+ +         H++ +  +  L+  +     GGK +R       +
Sbjct: 12  ELQSELIQTIELIDSRI---------HLRNKSIEHALVDMMN---TGGKLVRPAYTLLFS 59

Query: 63  SLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +   + +   A    AAIE +H  +LIHDD+  +D+   RRG+ T+  +Y +  A+ AG+
Sbjct: 60  TFGEDQDPNRARAFAAAIEVLHMATLIHDDV--IDDSPKRRGQQTIQSKYGKDIAVYAGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L T +F++I+       ++++   + +      L G +  QM    ++ I         
Sbjct: 118 YLFTVSFKLITDY----SNSMKQMQINTKGMEKILMGEI-DQMHLRYNQKITIRNYLTQI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT  L   +C SGA+ +  ++         G ++G+ FQ+ DD+LD  +
Sbjct: 173 SGKTAQLFALSCYSGALESGQTERFARNCYYIGSHIGMAFQIKDDILDYTQ 223


>gi|317486885|ref|ZP_07945696.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
 gi|316921875|gb|EFV43150.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
          Length = 325

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 17/226 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L + +++   RI+           +    +    ++   +YA+  GGK++R  L    A 
Sbjct: 4   LRTFIEQEQPRINA--------ALAEAAAELPVSIMPIAQYAMGNGGKRLRPLLTVLVAR 55

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L          + AA+E  H  +L+HDD+  MDN  +RRG    H  +     I+AG+ L
Sbjct: 56  LLGYADNDIYPLAAAMEMFHVATLLHDDV--MDNAEMRRGSTATHKVFGVTETILAGDAL 113

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L    +I++           S  +    +   L+    G+         D      I   
Sbjct: 114 LAKGNQIVAGFGDPRLTAATSDAIAQTANGEILEIANQGKNAP------DLLIYNQIIAG 167

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           KT  ++  +C  GA+ A+ +  +      +G NLG+ FQ+ DD LD
Sbjct: 168 KTAWMIRTSCNIGAVRANGTPEQVAGATDYGFNLGMAFQIVDDALD 213


>gi|257866353|ref|ZP_05646006.1| polyprenyl synthetase [Enterococcus casseliflavus EC30]
 gi|257873131|ref|ZP_05652784.1| polyprenyl synthetase [Enterococcus casseliflavus EC10]
 gi|257800311|gb|EEV29339.1| polyprenyl synthetase [Enterococcus casseliflavus EC30]
 gi|257807295|gb|EEV36117.1| polyprenyl synthetase [Enterococcus casseliflavus EC10]
          Length = 326

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTA 72
           I+  L  +      H+  ++ +     I +   GGK +R  L    A L + ++      
Sbjct: 11  IEQRLKTVCSIIEEHVTVRNKEIQDVLIDFTYSGGKMLRPALFFLFADLGDPHYKKTDQL 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            ++ A++E +H  +LIHDD+  +D+  +RR + TV  +Y +  A+  G+ L T  FE++ 
Sbjct: 71  TKIAASLEILHMATLIHDDI--IDDSPLRRSQVTVQAKYGKDIAVYTGDLLFTQFFELLI 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALM 189
                             T+   ++ +L G++  +   +               KT  L 
Sbjct: 129 ESMNGSP--------FLKTNAQAMKRLLLGELDQMHTRYNIHESIDDYLQSINGKTAELF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             AC  GA         +ER    G N+GI FQ+ DD+LD   D    KK
Sbjct: 181 WLACLEGAHFGGLDTENQERAGEIGRNIGIAFQVFDDILDYTSDSGTLKK 230


>gi|297686215|ref|XP_002820655.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Pongo
           abelii]
          Length = 415

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 120 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVH 179

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++         I +Q++  
Sbjct: 180 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVICILTQVIED 237

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 238 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 291

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 292 AYQYGKNVGIAFQLIDDVLDFTS 314


>gi|325830170|ref|ZP_08163627.1| polyprenyl synthetase [Eggerthella sp. HGA1]
 gi|325487637|gb|EGC90075.1| polyprenyl synthetase [Eggerthella sp. HGA1]
          Length = 349

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 15/237 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
                 L + + R+  +++  + + T + M     D L   I Y+  GGK+ R  +    
Sbjct: 16  ESFEQYLTQYADRVGDLVNSFIPKGTHADMDRYLYDPL---ISYSQNGGKRHRPLICFAA 72

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +   A    AAIE  H  +LIHDD+   D   +RRG+P +H+      AI AG+
Sbjct: 73  CRAVGGDMARATSAAAAIEHFHTAALIHDDIA--DEAELRRGEPCMHLTEGMGLAINAGD 130

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQ 176
             L+     + S K+ L D  + +++  L      +  + GQ LDI         I    
Sbjct: 131 LALSLVNGTVVSDKS-LDDATKVRVITELID--MTRRTIEGQALDIGWARDGRYDITPED 187

Query: 177 VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             ++   KT           GAI+   ++ E E LR +G + G+ FQ+ DDLL+   
Sbjct: 188 YLVMATHKTAHYSGAVPLAIGAIIGGGTEIEIEALRNYGLDTGLAFQIQDDLLNLVG 244


>gi|149914252|ref|ZP_01902783.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b]
 gi|149811771|gb|EDM71604.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. AzwK-3b]
          Length = 260

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 68/191 (35%), Positives = 95/191 (49%), Gaps = 11/191 (5%)

Query: 43  IRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYI 100
           + YA   GG +IR  ++   A     +        A A+E IHC SL+HDDLP  D+  I
Sbjct: 1   MDYATAPGGARIRPTILLSVAMACGDDRPDVSDAAASALELIHCASLVHDDLPCFDDADI 60

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ-GM 159
           RRGKP+VH  + E  A++AG+ L+  AFE+++  +        ++LM SL    G+  G+
Sbjct: 61  RRGKPSVHRAFSEPLAVLAGDSLIVLAFEVLAR-QAITDPARAARLMTSLAERTGMPGGI 119

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             GQ      E   E  +    + KTGAL   A E GAI A    +     R  G  +G 
Sbjct: 120 CAGQGW----ESEPEVDLAAYHRSKTGALFIAATEMGAIAAGHDPD---NWRDLGALIGE 172

Query: 220 IFQLADDLLDC 230
            FQ+ADDL D 
Sbjct: 173 AFQVADDLRDA 183


>gi|124023595|ref|YP_001017902.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9303]
 gi|123963881|gb|ABM78637.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9303]
          Length = 323

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGK++R  +V   +   +
Sbjct: 2   ATVTELLQPVELDLETLLTDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +        R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  ADGDLSARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVATVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDNLAVVKLLSRVIMDLADGEVKQGLYR------YDTGQSFATYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +LM  + ++  +++  S   ++ L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLMANSVQAAGVLSGESVEHQKSLHHFGRQLGLAFQVVDDILDFTG 222


>gi|268317461|ref|YP_003291180.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
 gi|262334995|gb|ACY48792.1| Polyprenyl synthetase [Rhodothermus marinus DSM 4252]
          Length = 332

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 10/229 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           L++  + +   L          M+T     L    RY L   GK+IR  LV   A L   
Sbjct: 14  LKDIQRPVAEELKHFQRYFRDAMRTSVP-LLDHVARYLLRQKGKRIRPLLVLLTAKLCGG 72

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 R  A +E +H  +L+HDD+  +D    RRG  +++  +    A++ G+ LL+  
Sbjct: 73  ITEATYRAAALVELLHSATLVHDDV--VDGAEQRRGMFSINAIWKNKVAVLFGDFLLSRG 130

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             +    +     +  S  +  ++    L      Q+   +   IDE   F I   KT +
Sbjct: 131 LLLALDHRDYDTLHALSDAVRRMSEGELL------QIEKSRHLDIDEATYFRIISDKTAS 184

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           L+    +SGA+ A       + +   GE LG+ FQ+ DDL D  E+  K
Sbjct: 185 LIAACTKSGALSATDDPRVIDEMYLMGEKLGLAFQIRDDLFDYGEEAGK 233


>gi|309753120|gb|ADO85577.1| PntB [Streptomyces arenae]
          Length = 337

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A         AL    A+E +H +SL+HDDL  MD    RR + TV  
Sbjct: 53  GKAVRPALALLSAEAVGAAPEVALPGAVAVELVHNFSLVHDDL--MDGDEERRHRRTVWK 110

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   +AI+ G+ +L  A E++         +    L  +  H      ++ GQ+ D+  
Sbjct: 111 LWGPSSAILTGDAMLALAQEVLLDTGLPTAASAARLLARTTRH------LIRGQVQDLAF 164

Query: 170 EFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E      V     +   KTGAL+  +   GA++A A +   + L  +G+ +G+ FQL DD
Sbjct: 165 EQRSHVTVEECVDMAAGKTGALLSASAAIGAVLAGAPEATVDALALYGDQVGVAFQLVDD 224

Query: 227 LLDCEED 233
           +L    D
Sbjct: 225 VLGIWGD 231


>gi|33862665|ref|NP_894225.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9313]
 gi|33634581|emb|CAE20567.1| polyprenyl synthetase; solanesyl diphosphate synthase (sds)
           [Prochlorococcus marinus str. MIT 9313]
          Length = 323

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 11/229 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + E  + ++  L+ LL    S +   H     +A      GGK++R  +V   +   +
Sbjct: 2   ATVTELLQPVELDLETLLTDLRSLIGAGHPILQAAAEHLFSAGGKRLRPGIVLLISRALS 61

Query: 67  VNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            +        R+    E IH  SL+HDD+  +D    RRG  TVH +++   A++AG+ L
Sbjct: 62  ADGDLSARHRRLAEITEMIHTASLVHDDV--VDEAATRRGVATVHSRFNHRVAVLAGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   +++        + S++++ L      QG+         D              
Sbjct: 120 FAQASWHLANLDNLAVVKLLSRVIMDLADGEVKQGLYR------YDTGQSFATYLEKSYC 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT +LM  + ++  +++  S   ++ L  FG  LG+ FQ+ DD+LD   
Sbjct: 174 KTASLMANSVQAAGVLSGESVEHQKLLHHFGRQLGLAFQVVDDILDFTG 222


>gi|30468171|ref|NP_849058.1| prenyl transferase [Cyanidioschyzon merolae strain 10D]
 gi|30409271|dbj|BAC76220.1| prenyl transferase [Cyanidioschyzon merolae strain 10D]
          Length = 315

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 14/223 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL----LGGKKIRSFLVTECASLFNVNHLTAL 73
            ++ +LL Q   H+Q     R       A      GGK+IR   V   +        +  
Sbjct: 2   KLISELLAQNERHIQRLIQSRHALLSAAAAHLFQAGGKRIRPTFVLLVSQALGGISQSQQ 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D    RRG  TV+ ++    A++AG+ L   +   +++
Sbjct: 62  RLAEITEMIHTASLLHDDV--VDEASKRRGIDTVNTRFSNRIAVLAGDFLFAQSSWYLAN 119

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                     S+L+  L            Q         +          KT +L   + 
Sbjct: 120 LNNLEVVKFISKLISDLAEGE------MRQTSTQFSTQFELWAYLEKSFYKTASLFACSA 173

Query: 194 ESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           ++  ++++     +  + +   G++LGI FQ+ DD+LD   D+
Sbjct: 174 KATCMLSNDHEDNHHHKNMYLLGQHLGIAFQIMDDVLDISGDI 216


>gi|256830774|ref|YP_003159502.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579950|gb|ACU91086.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 326

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 12/232 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN           K +   ++  + Q    +           +     GGK++R  L   
Sbjct: 1   MNEAFAQLKATFLKEL-PAINAAIAQEIDALPKLVRPVAAHVME---AGGKRLRPMLTLL 56

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +        + +++E +H  +L+HDD+  +DN  +RRGK   H  +     ++AG
Sbjct: 57  FARALSFRGDNLQTLASSLEFLHSATLMHDDI--LDNSELRRGKRAAHTLFGITPTVLAG 114

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL  A EI++        +  S+ ++       +      ++  I+   I   +   I
Sbjct: 115 DVLLALANEIVARTNNPALTSCISKAIMQTATGEIM------EIAAIRKAHITRAEYIEI 168

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT  L+  ACE G I A  S+  +   + FG NLGI FQL DD LD   
Sbjct: 169 ITGKTAYLIQSACEFGVIAAEGSERARAGAKTFGLNLGIAFQLVDDALDYTS 220


>gi|115375696|ref|ZP_01462950.1| IdsA [Stigmatella aurantiaca DW4/3-1]
 gi|310825166|ref|YP_003957524.1| polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115367259|gb|EAU66240.1| IdsA [Stigmatella aurantiaca DW4/3-1]
 gi|309398238|gb|ADO75697.1| Polyprenyl synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 391

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 89/236 (37%), Gaps = 13/236 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECAS 63
           L   L+E   ++   +  L+         +    L   +  Y L   K +R  L      
Sbjct: 11  LTGYLEECRLQVIQEIQRLIP------PDRPAAFLYELMLDYPLREAKGLRPALCIAACR 64

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   ALR   A+E  H   LIHDD+   D  ++RRG+PT+H  +    AI  G+ +
Sbjct: 65  ASGGTLEAALRPAVALELYHNAFLIHDDIE--DESHLRRGRPTLHQLHGVPVAINVGDAM 122

Query: 124 LTYAFEIISSP--KTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           L  + + +        L  ++R  Q +  +         L    +      +++     +
Sbjct: 123 LALSLQPLLDNIGFIGLGPSLRILQEVARMARESAEGQALELDWIRRGHWALEDADYVRM 182

Query: 181 QKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT           GA+ A  +     +L  F   LGI FQ+ DDLL+   ++ 
Sbjct: 183 VEQKTCWYSFITPVTLGALAARQNPAHTAQLAEFARCLGIAFQIQDDLLNLSGEVG 238


>gi|38233043|ref|NP_938810.1| putative polyprenyl diphosphate synthase component [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38199302|emb|CAE48933.1| Putative polyprenyl diphosphate synthase component [Corynebacterium
           diphtheriae]
          Length = 330

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 96/233 (41%), Gaps = 22/233 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  ++     R++ +L + L +    +       +   +  A  GGK+ R       + 
Sbjct: 13  NLNEEIAAGMIRVEDLLREELSKGEDFL-------VEKVMHLAEAGGKRFRPMFALLASQ 65

Query: 64  LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             +       ++    +E  H  +L HDD+  MD    RRG  + + +++   AI+AG+ 
Sbjct: 66  YGSQPMSENVIKAAVVVEMTHLATLYHDDV--MDEADKRRGVDSANFRWNNSVAILAGDI 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMI 180
           LL +   +++    +   +           +     ++ GQM +       +       +
Sbjct: 124 LLAHVARLMADLGVETVAH----------FSETFAELVTGQMRETIGARDGDPIEHYLNV 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              KTG L+  A   G++ A AS    E LR +G  +G++FQ+ DD++D   D
Sbjct: 174 INEKTGVLIASAGFLGSMHAGASAEHVEALRAYGRAIGMVFQIVDDIIDIFSD 226


>gi|227832180|ref|YP_002833887.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262183968|ref|ZP_06043389.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227453196|gb|ACP31949.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 334

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 24/238 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           +  L  ++      ++ +L+  L         +  D +   +R+ +L GGK+ R  +   
Sbjct: 15  DAQLTERINAGMAAVEDLLNTEL--------DRGQDFIKDKVRHLSLAGGKRFRPMMALL 66

Query: 61  CASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            +     +     ++    +E +H  +L HDD+  MD    RRG  + + ++    AI+A
Sbjct: 67  ASEFGERSQSPEVVKAATVVEMVHVATLYHDDV--MDEAERRRGVDSANFRWTNSVAILA 124

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQV 177
           G+ LL +A  ++S   T   ++               + ++ GQM +     E       
Sbjct: 125 GDALLAHASRLMSQLDTHTVEH----------FAETFEELVTGQMRETIGAGEANAVEHY 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + + KT  L+  A   GA  A A   + E LR  G  +G+IFQ+ DD++D   D  
Sbjct: 175 TAVIREKTAVLIASAGYLGAYHAGAGPEQCEALRQIGAAVGMIFQIVDDVIDIFSDSE 232


>gi|326777699|ref|ZP_08236964.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326658032|gb|EGE42878.1| Trans-hexaprenyltranstransferase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 342

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 24/241 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L  ++    ++++T L +   +       +    L++A      GGK++R  L    A
Sbjct: 22  SALERRVLRGLEQVETRLLECAGEAEDPRLAEVAGHLIAA------GGKRLRPLLTLLGA 75

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              +V     +      E IH  SL HDD+  MD   +R G  +V+ ++    A+ +GN 
Sbjct: 76  EFGDVRGEGGVEAAVVAELIHTASLHHDDV--MDEALLRHGVSSVNARWGNTVAVRSGNW 133

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           LL  A  + +S   +                   + ++ GQ+ ++          +  F 
Sbjct: 134 LLARAARLSASLAPEAIPL----------QAEASERLVRGQLRELVGPDGAERRLSHYFA 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           +   K+ +L+  +   GA+ A A     E L  +GE+LG+ FQ++DDLLD      DL K
Sbjct: 184 VISDKSASLISLSLRLGAVQAGAPAGVGEALAAYGEHLGVAFQISDDLLDITSSSADLGK 243

Query: 237 K 237
           +
Sbjct: 244 E 244


>gi|269798314|ref|YP_003312214.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
 gi|269094943|gb|ACZ24934.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
          Length = 323

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 18/225 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E  +RI   L+ +    AS   T   D   L+  +  +  GGK++R+ L    A+     
Sbjct: 8   EIMERIALDLERVEESLASSFNTGAEDFNALIRPL--SAAGGKRLRAQLCLLIANAGTSI 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +++  A+E +H  +LIHDD+  +D   IRRG+ T+H+      AI++G+ L   AF
Sbjct: 66  ERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKT 185
           +I+S        N++   + S      +  ++ G+ + ++D +       +  +  + KT
Sbjct: 124 KIVSEMT-----NMKYLQVFSH----IITCLVEGEFMQMEDVYRIDQGIERYMIKTQKKT 174

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              M    E G ++    ++E   L+ +G  LG+ FQ+ DD++D 
Sbjct: 175 ADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITDDIMDY 219


>gi|293375911|ref|ZP_06622172.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
 gi|325838688|ref|ZP_08166603.1| polyprenyl synthetase [Turicibacter sp. HGF1]
 gi|292645433|gb|EFF63482.1| polyprenyl synthetase [Turicibacter sanguinis PC909]
 gi|325490738|gb|EGC93045.1| polyprenyl synthetase [Turicibacter sp. HGF1]
          Length = 318

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 94/226 (41%), Gaps = 17/226 (7%)

Query: 17  DTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTAL 73
           +   +DLLL+  S   T  +D   +   ++  + GGK+IR   V   A L  NVN     
Sbjct: 11  EQYFNDLLLKAVSSDSTLFSDPKMMNDLLQIIMNGGKRIRPLFVLLAADLKENVNKQEIY 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               AIE +H  SLIHDD+  +D    R    T+H QY     +  GN +L  + E+ S 
Sbjct: 71  TAAVAIELMHVASLIHDDI--IDESTTRHNVTTLHEQYSLTVGVHLGNFVLNKSLELFSE 128

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMC 190
            K            L     + +  +  G++    + F   +           KTGAL+ 
Sbjct: 129 FKIPK---------LHQEIAVVMNNLCLGELNQQHNHFNFDLSFDDYINKSYQKTGALIS 179

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   G ++A    N   +L   G  +GI +QL DD+LD      K
Sbjct: 180 LSLVVGGLVAGLDANIINQLSTIGSQIGIAYQLKDDILDFTSTSKK 225


>gi|162448856|ref|YP_001611223.1| farnesyltranstransferase [Sorangium cellulosum 'So ce 56']
 gi|161159438|emb|CAN90743.1| Farnesyltranstransferase [Sorangium cellulosum 'So ce 56']
          Length = 303

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 14/234 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +  +RI+ +L   L              LL+A ++A+  GG +IR  L    AS +    
Sbjct: 2   DFDRRIERVL---LAAIEPLSSPASPPGLLAATQHAVFPGGARIRPRLCLAVASAYGDPA 58

Query: 70  LTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             A    AA +E IHC SL+HDDLP  D+  IRRG+P+VH  + E  A++AG+ L+  AF
Sbjct: 59  PEAADAAAAAVELIHCASLVHDDLPCFDDAPIRRGRPSVHRAFGEPIAVLAGDQLIVLAF 118

Query: 129 EIISSPKTQLKDNIRS---QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
           E ++        +  +   + +       G  GM  G +     E   +  +   ++ KT
Sbjct: 119 EALARGAFHAMASGVTDARRAVRFFEVLGGGVGMPQGIIAGQAWESEAKVPLSAYRRAKT 178

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           GAL   A   GA+ A             G+ +G  +Q+ADD+LD      D+ K
Sbjct: 179 GALFEAAATLGALSAGQDG---AAWGDLGQRIGEAYQVADDVLDLVGRPEDMGK 229


>gi|239617815|ref|YP_002941137.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506646|gb|ACR80133.1| Polyprenyl synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 285

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 13/224 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           K+ +  K  D  L D L +              S I Y  L GGK++R +L+   +    
Sbjct: 7   KINDFRKEFDKFLRDHLERLMVCSS------FSSIINYTPLTGGKRLRPYLIALFSQAIG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +     +++G A+E  H  SLIHDDLP++DN   RRGKP++H  +DE +AI+AG+ L+ Y
Sbjct: 61  LPSELYMKLGVAVELFHSGSLIHDDLPAIDNDDFRRGKPSLHKAFDEASAILAGDFLMLY 120

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-QVFMIQKMKT 185
             +++      L  N   + +L          ++ G+ LD+  E    T  V  I ++KT
Sbjct: 121 PVKVLQE----LTINEHLKFLLINEWIRTALSIIEGEYLDVTYEPSSNTKDVNRIHRLKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             L  F   S  I A     E ++++  G   G IFQ+ DD+ D
Sbjct: 177 AELFGFCFSSPFICAD-RMEEAKKMKETGLRFGHIFQVLDDIKD 219


>gi|190890586|ref|YP_001977128.1| octaprenyl-diphosphate synthase [Rhizobium etli CIAT 652]
 gi|190695865|gb|ACE89950.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CIAT 652]
          Length = 346

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 65  GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS    +  +G +  Q+   +
Sbjct: 123 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSSAACVIAEGEVL-QLSVAK 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 177 NMETTEDDYLAVIRAKTAALFAAAAEVGPIVAEAGKSGRNALKSYGMNLGLAFQLVDDAL 236

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 237 DYGGKAADLGK 247


>gi|86131693|ref|ZP_01050290.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
 gi|85817515|gb|EAQ38689.1| polyprenyl synthetase [Dokdonia donghaensis MED134]
          Length = 325

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 13/218 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +    +  +    LL+ I + +    GK++R   V   A +      +    R  + I
Sbjct: 17  LFEEKFALSMRSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMMNSGEVNDRTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+  +RR   +++  +    A++ G+ L +    ++ S      
Sbjct: 77  ELIHTASLVHDDV--VDDSNMRRSFFSLNALWKNKIAVLVGDFLFSKG--LLLSIDNGDT 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D +    ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLL---QIISVAVREISEGELL-QIEKARKLDITEELYYEIIRQKTATLIAACCAMGAQA 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
            HA   E +R+  FGE +G+ FQ+ DDL D   E + K
Sbjct: 189 VHAKGKEVKRMHKFGELIGMAFQIKDDLFDYGSEKIGK 226


>gi|295396390|ref|ZP_06806553.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294970759|gb|EFG46671.1| decaprenyl diphosphate synthase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 345

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 26/236 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L  +LQ     ++T+LD    QT S    + +  L+ A      GGK++R  LV  
Sbjct: 26  MTNMLVGELQ----HVETVLDAAASQT-SAFADETSHHLMRA------GGKRVRPMLVLL 74

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           C+ L            AA+E +H  SL HDD+  MD    RRG  + H ++    AI+ G
Sbjct: 75  CSQLGGGVSPRVHTAAAAVELVHLASLYHDDV--MDEAPKRRGALSAHEKWGNNVAILTG 132

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + L   A ++      +                   + ++ GQ+ +       +      
Sbjct: 133 DLLFARASQLSLEVGAE----------AMRVQAETFERLVLGQLHEFVGTTESDDPIEHY 182

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +C+ G I +         ++ +GE +G+ FQLADD++D   D
Sbjct: 183 LSVLADKTGSLISASCQFGVIASDGPAELLPVVKEYGEAVGVAFQLADDVIDLTVD 238


>gi|47221152|emb|CAG05473.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 418

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 16/196 (8%)

Query: 45  YALLG-GKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMD 96
           Y   G GK IR  +V   A   N++   +         +    E IH  SL+HDD+  +D
Sbjct: 130 YYFDGKGKAIRPMIVVLMARALNIHSNRSGDLLPGQRAIAMISEMIHTASLVHDDV--ID 187

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRGK T++  + E  AI+AG+ +L+ A   ++         + SQ++  L     +
Sbjct: 188 GSDQRRGKTTINEIWGERKAILAGDFILSAASMALARIGNITVVKVLSQVIEDLVRGEFM 247

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
                 Q+   ++E             KT +L+  +C++ +I+ ++     E    +G+N
Sbjct: 248 ------QLGSKENEKERFKHYLEKTFKKTASLIANSCKAVSILVNSDPEVHEIAFQYGKN 301

Query: 217 LGIIFQLADDLLDCEE 232
           +GI FQL DD+LD   
Sbjct: 302 VGIAFQLVDDVLDFTS 317


>gi|269218351|ref|ZP_06162205.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269212210|gb|EEZ78550.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 316

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 16/190 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  LV   A L         L    A+E  H  SL HDD+  MD+  +RRG P+
Sbjct: 29  AGGKRLRPALVLLAAELGPRPGAEAVLDSAVAVELTHLASLYHDDV--MDDAPMRRGVPS 86

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V   +    AI+AG+ L   A  + S    Q              H    + +  GQ+ +
Sbjct: 87  VQSLFGNSVAILAGDVLFARASLVTSKLGPQAV----------KLHATTFERLCQGQLHE 136

Query: 167 IQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                           + + KTG+L+  +   G + +  S    + L  +GE +G+ FQL
Sbjct: 137 TIGPRASVSPRDHYIRVLEDKTGSLIATSARYGVLFSGGSWELADALAQYGECIGVAFQL 196

Query: 224 ADDLLDCEED 233
           ADD++D E D
Sbjct: 197 ADDVIDIESD 206


>gi|222636085|gb|EEE66217.1| hypothetical protein OsJ_22362 [Oryza sativa Japonica Group]
          Length = 463

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 30/248 (12%)

Query: 7   SKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTEC 61
           S+ +E     + + D+L  L      M      +L SA  Y       GK+ R  ++   
Sbjct: 117 SRSEEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLM 176

Query: 62  ASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           AS                            +    E IH  SL+HDD+  +D+   RRG 
Sbjct: 177 ASALKFPLSDSTEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRGV 234

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            +++       +++AG+ LL+ A   +++        + S +  ++ H +  + M   Q+
Sbjct: 235 SSLNCIMGNKLSVLAGDFLLSRACVALAALGNT---EVVSLMATAVEHLVTGETM---QI 288

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +++             KT +L+  +C++ AI+A  + +       +G NLG+ FQL 
Sbjct: 289 STSREQRRSMDYYLQKTYYKTASLISNSCKAVAILAGHTADVSMLAYEYGRNLGLAFQLI 348

Query: 225 DDLLDCEE 232
           DD+LD   
Sbjct: 349 DDVLDFTG 356


>gi|165970696|gb|AAI58696.1| Unknown (protein for IMAGE:9025778) [Rattus norvegicus]
          Length = 407

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         V    E IH  +L+H
Sbjct: 112 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVH 171

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 172 DDV--IDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALARIGNTAVVSLLAQVIED 229

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 230 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 283

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 284 AYQYGKNVGIAFQLIDDVLDFTS 306


>gi|164605006|dbj|BAF98299.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 328

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 25/227 (11%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALR----- 74
           L+      M      +L SA  Y   +G  GK++R  ++   A+  NV+    +      
Sbjct: 87  LVANRLRAMLVSEVPKLASAAEYFFKMGVEGKRLRPTVLLLMATALNVHIPEQIVGDTLA 146

Query: 75  ---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                    +    E IH  SL+HDD+  +D+   RR   +++       A++AG+ LL+
Sbjct: 147 AELRTRQQCIAEITEMIHVASLLHDDV--LDDAETRRSISSLNFVMGNKVAVLAGDFLLS 204

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            A   ++S K     ++ +  +  L     +      QM    ++             KT
Sbjct: 205 RACVAVASLKNTEVVSLLAIAVEHLVTGETM------QMTCTSEQRCSMEYYMKKTYYKT 258

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  +C++ A++A  +         +G+NLG+ FQL DD+LD   
Sbjct: 259 ASLISNSCKAIALLAGQTTEVATLAFEYGKNLGLAFQLIDDVLDFTG 305


>gi|292656843|ref|YP_003536740.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2]
 gi|291372747|gb|ADE04974.1| geranylgeranyl diphosphate synthase [Haloferax volcanii DS2]
          Length = 348

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 33/245 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
             ++E  + ++  LD+        +     +RL  A RY L  GGK++R  +    A   
Sbjct: 12  EAIRERRELVNDALDE-------DVPMAEPERLYEASRYLLKAGGKRLRPTVSLLTAESL 64

Query: 66  N----------------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                             + +  +    +IE I  ++LIH     MD+  +RRG P VH 
Sbjct: 65  ADVEPMSEDYRAFPTLAGDPIDVMVAAVSIEVIQSFTLIH--DDIMDDDDLRRGVPAVHK 122

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +YD  TAI+AG+ L   AFE+++       D + +   L+ T       +  GQ LDI+ 
Sbjct: 123 EYDNSTAILAGDTLYAKAFELLTKTGADPADGLEAVRRLATT----CTQICEGQALDIEF 178

Query: 170 EFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E   E    +   + ++KT  L   A    A++  A     E L  +G   G  FQ+ DD
Sbjct: 179 ERRTEVLPDEYLQMVELKTAVLYGTAAAVPAVVMGADDEVVEALYQYGIASGSAFQIQDD 238

Query: 227 LLDCE 231
           +LD  
Sbjct: 239 VLDLT 243


>gi|304321788|ref|YP_003855431.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis
           HTCC2503]
 gi|303300690|gb|ADM10289.1| geranylgeranyl pyrophosphate synthase [Parvularcula bermudensis
           HTCC2503]
          Length = 316

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           +++ L DL+                 A R++LL  GK+IR+ L    A     +   AL 
Sbjct: 31  VESRLADLIPAVGPP---------AEAARHSLLAPGKRIRAVLTLLAARECGGSLERALD 81

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E IH  SL+ DDLP+MD+  +RRG+PT H  + E TAI+A  GLL  A+ ++ + 
Sbjct: 82  TACAVEMIHTASLVIDDLPAMDDADLRRGRPTCHRAFGESTAILAAIGLLNGAYGVVMAA 141

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           +  L    ++++   L+  +G +G++ GQ LD+         +  IQ  KTG L   A  
Sbjct: 142 E-PLSAAEKTKIASILSSAVGWRGLVQGQALDLNPGTTS---LETIQDGKTGVLFEAAVL 197

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +G   A     +   L  F   LG  +Q
Sbjct: 198 AGEQTAGWVSEKSVALAAFATALGRAYQ 225


>gi|4490594|emb|CAB38744.1| geranylgeranyl pyrophosphate synthase [Rhodobacter sphaeroides]
          Length = 288

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 9/200 (4%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHD 90
           ++   +L +A+ YA+  GG +IR  L+   A+    +          A+E IHC SL+HD
Sbjct: 21  SEAPSKLATALDYAVTPGGARIRPTLLLSVATRCGDSRPALSDAAAVALELIHCASLVHD 80

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DLP  D+  IRRGKPTVH  Y E  AI+ G+ L+   FE+++             +    
Sbjct: 81  DLPCFDDAEIRRGKPTVHRAYSEPLAILTGDSLIVMGFEVLAGAAADRPQRALQLVTALA 140

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                  G+  GQ      E   +  +    + KTGAL   A + GAI A     E E  
Sbjct: 141 VRTGMPMGICAGQGW----ESESQINLSAYHRAKTGALFIAATQMGAIAAGY---EAEPW 193

Query: 211 RCFGENLGIIFQLADDLLDC 230
              G  +G  FQ+ADDL D 
Sbjct: 194 EELGARIGEAFQVADDLRDA 213


>gi|282850553|ref|ZP_06259932.1| polyprenyl synthetase [Veillonella parvula ATCC 17745]
 gi|282580046|gb|EFB85450.1| polyprenyl synthetase [Veillonella parvula ATCC 17745]
          Length = 323

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E  +RI   L+ +    AS   T   D   L+  +  +  GGK++R+ L    A+     
Sbjct: 8   EIMERIALDLEHVEESLASSFNTVAEDFNALIRPL--SAAGGKRLRAQLCLLIANAGTSI 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +++  A+E +H  +LIHDD+  +D   IRRG+ T+H+      AI++G+ L   AF
Sbjct: 66  ERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKT 185
           +I+S        N++   + S      +  ++ G+ + ++D +       +     + KT
Sbjct: 124 KIVSEMT-----NMKYLQVFSH----IITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKT 174

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              M    E G ++    ++E   L+ +G  LG+ FQ+ DD++D 
Sbjct: 175 ADFMEGCMELGGLLGDWQEDEIIELKKYGHALGMAFQITDDIMDY 219


>gi|256380651|ref|YP_003104311.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255924954|gb|ACU40465.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 333

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 100/221 (45%), Gaps = 16/221 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALR 74
           + + LD++       ++++ N  + +++     GGK+IR       A      +  + ++
Sbjct: 22  VQSGLDEVEGILREVVRSEFNPVMETSLHLVEAGGKRIRPLFTILAAQFGPSWDRESVVK 81

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             A +E  H  +L HDD+  MD   +RRG  + + +++   AI+ G+ L  +A  +++  
Sbjct: 82  AAAVVELTHLATLYHDDV--MDEATMRRGAASANAKWNNSIAILTGDYLFAHASTLVADL 139

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191
            T+           + T +     ++ GQM +       E            KTG+L+  
Sbjct: 140 GTE----------AARTISRTFGELVTGQMRETMGPREGEDPVEHYLTTIAEKTGSLIAT 189

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A   G + + A++ +   L+ +G+ +G  FQ++DD++D   
Sbjct: 190 AARFGGMFSDATEEQVAALQAYGDVIGSAFQISDDVIDIAS 230


>gi|293342919|ref|XP_002725354.1| PREDICTED: rCG40823-like isoform 2 [Rattus norvegicus]
          Length = 422

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         V    E IH  +L+H
Sbjct: 127 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVH 186

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 187 DDV--IDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALARIGNTAVVSLLAQVIED 244

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 245 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 298

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 299 AYQYGKNVGIAFQLIDDVLDFTS 321


>gi|4580645|gb|AAD24462.1|AF118855_1 trans-prenyltransferase [Mus musculus]
 gi|20071107|gb|AAH26820.1| Pdss1 protein [Mus musculus]
          Length = 336

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  A         +    E IH  +L+H
Sbjct: 41  ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 100

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 101 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIED 158

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 159 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 212

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 213 AYQYGKNVGIAFQLIDDVLDFTS 235


>gi|332240581|ref|XP_003269466.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Nomascus
           leucogenys]
          Length = 397

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 102 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRTIALIAEMIHTASLVH 161

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 162 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 219

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 220 LVRGEFL------QLGSKENESERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 273

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 274 AYQYGKNVGIAFQLIDDVLDFTS 296


>gi|312141024|ref|YP_004008360.1| polyprenyl synthetase [Rhodococcus equi 103S]
 gi|325675339|ref|ZP_08155023.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707]
 gi|311890363|emb|CBH49681.1| polyprenyl synthetase [Rhodococcus equi 103S]
 gi|325553310|gb|EGD22988.1| trans-hexaprenyltranstransferase [Rhodococcus equi ATCC 33707]
          Length = 342

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 102/232 (43%), Gaps = 17/232 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   +++   R++ +L        S +    +    +A+  A  GGK+ R       
Sbjct: 22  DQQLADAVRDGLARVEELL-------VSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLT 74

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L    +    +     +E +H  +L HDD+  MD   +RRG P+ + ++    AI+AG
Sbjct: 75  AQLGPEGSDPAVVTAATVVELVHLATLYHDDV--MDEAAMRRGAPSANARWGNSIAILAG 132

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L  +A  ++S+   +      +  +++ T    + G +  + +  +++         +
Sbjct: 133 DYLFAHASRLVSTLGPE------AVRIIAETFAELVTGQMR-ETIGAREKQDPVEHYLKV 185

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KTG+L+  +   G   + A  ++  RL   G+ +G  FQ+ADD++D   
Sbjct: 186 VWEKTGSLIAASGRFGGTFSGADADQIARLERLGDAVGTAFQIADDIIDISS 237


>gi|302526347|ref|ZP_07278689.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4]
 gi|302435242|gb|EFL07058.1| polyprenyl diphosphate synthase [Streptomyces sp. AA4]
          Length = 343

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L    A          +    A+E +H +SL+HDDL  MD    RR +PTV 
Sbjct: 63  GGKAVRSALAVVSAQAAGAPVEVGVPGAVAVELVHNFSLVHDDL--MDGDTERRHRPTVW 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +   +AI+ G+ +L  A E++    +     + +  +L+ T     + ++ GQ LD+ 
Sbjct: 121 ALWGSASAILTGDAMLALAQEVVLDSGS--PHAVAAGRLLTET----TRRLIHGQFLDVA 174

Query: 169 DEFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D+  +     +   KTGAL+  +   GA++A A     + L  FGE +G+ FQL D
Sbjct: 175 FEQRDDVGLAECVTMAAGKTGALLSASAAIGAVLAGAPAEVVDALSVFGEEIGLAFQLVD 234

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 235 DVLGIWGD 242


>gi|256425937|ref|YP_003126590.1| trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588]
 gi|256040845|gb|ACU64389.1| Trans-hexaprenyltranstransferase [Chitinophaga pinensis DSM 2588]
          Length = 321

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 12/231 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + E    I   L D   + +  +++ H   L   + Y +   GK+IR   V   A LFN 
Sbjct: 1   MDEIKHLISKELQDFESKFSDAVKS-HVPLLDRIMHYIVKRKGKQIRPMFVLLSAKLFNN 59

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           N   +  R  A +E +H  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+ 
Sbjct: 60  NIQESTYRAAALVELLHTATLVHDDV--VDDANERRGFFSINALWKNKIAVLVGDYLLSK 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +     +   +  RS  +LS       +G L  Q+   +   I E   F I + KT 
Sbjct: 118 GLLL-----SVDNNEFRSLKILSEAVKEMSEGELL-QIEKTRKLNIKEDIYFEIIRRKTA 171

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
           +L+  AC +GA          E++R FGE +G+ FQ+ DDL D   D + K
Sbjct: 172 SLLASACAAGAWSTTNDDETTEKMRLFGEKVGVAFQIKDDLFDYGSDKIGK 222


>gi|168203177|gb|ACA21459.1| geranyl diphosphate synthase 3 [Picea abies]
          Length = 427

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 30/245 (12%)

Query: 10  QENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASL 64
           +E       + D+L  L      M      +L +A  Y   LG  GK+ R  ++   AS 
Sbjct: 84  EEQVDPFSLVADELSILANRLRSMILTEIPKLGTAAEYFFKLGVEGKRFRPMVLLLMASS 143

Query: 65  F--------------NVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
                           ++    LR   +    E IH  SL+HDD+  +D+   RRG  ++
Sbjct: 144 LTIGIPEVAADCLRKGLDEEQRLRQQRIAEITEMIHVASLLHDDV--LDDADTRRGVGSL 201

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +       A++AG+ LL+ A   ++S K      + S+++  L     +      QM + 
Sbjct: 202 NFVMGNKLAVLAGDFLLSRASVALASLKNTEVVELLSKVLEHLVTGEIM------QMTNT 255

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            ++             KT +LM  +C++ A++A            +G NLG+ +QL DD+
Sbjct: 256 NEQRCSMEYYMQKTFYKTASLMANSCKAIALIAGQPAEVCMLAYDYGRNLGLAYQLLDDV 315

Query: 228 LDCEE 232
           LD   
Sbjct: 316 LDFTG 320


>gi|317495880|ref|ZP_07954243.1| polyprenyl synthetase [Gemella moribillum M424]
 gi|316914057|gb|EFV35540.1| polyprenyl synthetase [Gemella moribillum M424]
          Length = 320

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 14/230 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           +   L++    +  +L+D+   T S    + N  +     Y L GGK++R  L+  CA+L
Sbjct: 2   VKKMLKQYDTLVQEVLEDIFKITRSD-DKKLNTIIKE---YFLNGGKRVRVLLLLICANL 57

Query: 65  --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             F  N    +R+ + +E IH  SLIHDD+  +D    RRG+ T+   Y E  A+  G+ 
Sbjct: 58  GDFEKNKKNIIRIASIVEIIHTASLIHDDI--IDKAKTRRGQTTMSRAYGEEYALYVGDY 115

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L       I+  K +     R  + LS T      G +  Q   + +     T      K
Sbjct: 116 LFATVLREIAEFKDE-----RLHMYLSNTLKELCIGEII-QEEGLYNIRTRRTDYLKKIK 169

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT  L+ FA  +G+I++ AS    +R   FG  LG+ +Q+ DD LD   
Sbjct: 170 RKTAILIAFATSAGSIVSCASNENIQRSYAFGYYLGMSYQIIDDYLDFAG 219


>gi|326790007|ref|YP_004307828.1| trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427]
 gi|326540771|gb|ADZ82630.1| Trans-hexaprenyltranstransferase [Clostridium lentocellum DSM 5427]
          Length = 321

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 15/229 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  K ++ ++D  L+   ++ + +  +  +  + ++   GK IR       A        
Sbjct: 10  EIKKELEVVID--LMDENAYCKDKVIESSIKDMIHS--NGKMIRPGFSIIAAKFGEYEEE 65

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               + A +E  H  +L+HDD+  +D+  +RRGK TV  +Y +  A+  G+ L    F++
Sbjct: 66  RTRVLAAVMEFFHMATLVHDDV--IDDAKLRRGKETVQSKYGKDYAVYIGDYLFCICFKL 123

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++S  +     ++S  + S   +    G +  Q+    D+ +           KT  L  
Sbjct: 124 LASTAS-----LQSIQIDSKAMSRICLGEVE-QLNSRFDKNVSVKNYLKRVSGKTAELFS 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            +   GA  ++  +         G N+G+ FQ+ DD+LD   D   L K
Sbjct: 178 LSLYIGAAESNCDKKLSRLFWNIGHNIGMAFQIIDDILDYVSDTNTLGK 226


>gi|323699172|ref|ZP_08111084.1| Polyprenyl synthetase [Desulfovibrio sp. ND132]
 gi|323459104|gb|EGB14969.1| Polyprenyl synthetase [Desulfovibrio desulfuricans ND132]
          Length = 322

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 16/221 (7%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           ++D L + A  +    N  +    ++ L  GGK+IR       A          L +  A
Sbjct: 15  INDFLDREADQL----NGLVRDVAKHILGSGGKRIRPLFTLLFARALGYAKDDYLAIACA 70

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +L+HDD   +D+  +RRG+   H+ +     I+AG+ LL  A E+ +      
Sbjct: 71  LELLHSATLLHDD--YLDDAELRRGRAASHLVFGRTETILAGDALLALANEMGARYGNPR 128

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              + ++ ++              ++   +   ++      I   KT  L+  AC  GA 
Sbjct: 129 LSWLLAKGIMETATGEI------EEIEFSRAPSLNRETYMRIIVGKTARLIECACRCGAA 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           +A A+  +++    FG N+GI FQL DD LD      +  K
Sbjct: 183 LAGATPEQEDAAGEFGLNVGIAFQLVDDALDYASPTSETGK 223


>gi|84494916|ref|ZP_00994035.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649]
 gi|84384409|gb|EAQ00289.1| putative polyprenyl diphosphate synthase [Janibacter sp. HTCC2649]
          Length = 328

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 25/242 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++ GL  +L +   R++ ++++ +      +   +   L +       GGK+ R  L   
Sbjct: 8   VSAGLQERLTDGLARVEALIEERIDHDDPFIAEANVHLLRA-------GGKRFRPMLTIL 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L    +   +   AA+E  H  SL HDD+  MD   +RRG PT +  Y   TAI+ G
Sbjct: 61  AAELGEGVNDAVVTAAAAVELTHLASLYHDDV--MDEADLRRGTPTANAAYGNSTAILIG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QV 177
           + L  +A  +++    +                     +  GQ+ D +     E      
Sbjct: 119 DLLFGHASALVAELGAEAV----------RIQAETFIRLCTGQIRDDRQAPAGEDSGAYY 168

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDL 234
             + + KTG L+  A   GA+ A    +  E +R +GE LG+ FQLADDL+D E   E+L
Sbjct: 169 LRVLEDKTGVLIATAARYGAMFAGCEDDVIETMRVYGERLGMAFQLADDLIDIESSAEEL 228

Query: 235 PK 236
            K
Sbjct: 229 GK 230


>gi|256396778|ref|YP_003118342.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363004|gb|ACU76501.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 351

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 22/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   L++   R++ +L +      +++    +         A  GGK+ R  LV   
Sbjct: 28  DEALSVALKDGLLRVEEVLLEYTRSDHAYISEITS-------HLAQAGGKRTRPLLVLLA 80

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +     IE  H  +L HDD+  MD   +RRG  + + ++D   AI++G+
Sbjct: 81  AQFGDAARAGVVEAAVVIELTHLATLYHDDV--MDEAALRRGVASANQRWDNSLAILSGD 138

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            L   A  ++S       D +R Q           + ++ GQ+ +       +       
Sbjct: 139 FLFARASTLLSELG---PDAVRIQ-------AETFERLVSGQISESVGPKNGQNPVDHHL 188

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   KTG+L+  A   GA+ A  +  ++  L  FGE  G+ FQL+DDLLD   +  +
Sbjct: 189 EVLAGKTGSLIATAARFGAMFAGCTAEQERILADFGELFGVAFQLSDDLLDIASESEQ 246


>gi|289641413|ref|ZP_06473577.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca
           glomerata]
 gi|289508749|gb|EFD29684.1| Trans-hexaprenyltranstransferase [Frankia symbiont of Datisca
           glomerata]
          Length = 333

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 20/234 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   ++     ++ +L D + ++     T+ +  L+ A      GGK+ R  +V   
Sbjct: 14  DPDLEQAVRRGLYGVERMLRDAV-RSDVPFVTETSRHLVDA------GGKRFRPMVVLLA 66

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +   +  L    AIE  H  +L HDD+  MD   +RRG  + ++++    AI+ G+
Sbjct: 67  AHFGDPEAIGVLPAAVAIELTHLSTLYHDDV--MDEAPLRRGAASANVRWTNTIAILTGD 124

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLDIQDEFIDETQVFM 179
            L   A +I +    +    I ++ + +L         G L GQ                
Sbjct: 125 FLFARASDITADLGPE-ATRILARTIATLCEGQIRETVGSLPGQDP--------VEHYLR 175

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + KT +L+  +   GA++A A     + L  FG+  G+ FQL+DDL+D   D
Sbjct: 176 VIREKTASLIATSGRLGAMLAGADLITVDALAAFGDYFGVAFQLSDDLIDVASD 229


>gi|282860737|ref|ZP_06269803.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE]
 gi|282564473|gb|EFB70009.1| Trans-hexaprenyltranstransferase [Streptomyces sp. ACTE]
          Length = 336

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +Q     ++  L D   ++     T+    L+SA      GGK+ R  LV   
Sbjct: 13  DQALEADVQAGLAAVEAGLLDA-TKSEVPFITEAAQHLVSA------GGKRFRPLLVMLA 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +   + +    +     +E  H  +L HDD+  MD   +RRG  + + ++    A++ G+
Sbjct: 66  SQFGDPDAPGVVPAAVVVELTHLATLYHDDV--MDEADVRRGVESANTRWGNSVAVLTGD 123

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVF 178
            L   A  I++    +                   + ++ GQ+L+    +D         
Sbjct: 124 FLFARASHILADLGPEAV----------RIQAEAFERLVTGQILETAGPRDGRDPVDHYM 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KTG+L+  A   GA+MA A ++  + L  +GE LGI FQLADD+LD   D
Sbjct: 174 DVLGGKTGSLVAVAGRFGAMMAGADESVVDILTQYGERLGIAFQLADDVLDIASD 228


>gi|4732024|gb|AAD28559.1|AF118395_1 trans-prenyltransferase [Homo sapiens]
          Length = 376

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 15/195 (7%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDN 97
           Y  + GK  R  +V   A   N++H  +         +    E IH  SL+HDD+  +D+
Sbjct: 89  YFDVKGKAFRPIIVVLMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDV--IDD 146

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  L     L 
Sbjct: 147 ASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFL- 205

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                Q+   ++E             KT +L+  +C++ +++        E    +G+N+
Sbjct: 206 -----QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNV 260

Query: 218 GIIFQLADDLLDCEE 232
           GI FQL DD+LD   
Sbjct: 261 GIAFQLIDDVLDFTS 275


>gi|293342917|ref|XP_002725353.1| PREDICTED: rCG40823-like isoform 1 [Rattus norvegicus]
 gi|149028595|gb|EDL83936.1| rCG40823, isoform CRA_b [Rattus norvegicus]
          Length = 409

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         V    E IH  +L+H
Sbjct: 114 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNSREMQARQRSVALVAEMIHTATLVH 173

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 174 DDV--IDDASSRRGKHTVNKVWGEQKAVLAGDLILSAASIALARIGNTAVVSLLAQVIED 231

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 232 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 285

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+N+GI FQL DD+LD   
Sbjct: 286 AYQYGKNVGIAFQLIDDVLDFTS 308


>gi|195624250|gb|ACG33955.1| decaprenyl-diphosphate synthase subunit 1 [Zea mays]
          Length = 428

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 30/249 (12%)

Query: 6   PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTE 60
            S+ QE     + + D+L  L      M      +L SA  Y       GK+ R  ++  
Sbjct: 81  ASRAQEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLL 140

Query: 61  CASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            AS                            +    E IH  SL+HDD+  +D+   RRG
Sbjct: 141 MASALKFPLSESTEGRVLSILADKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRG 198

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             ++++      +++AG+ LL+ A   +++        + S +  ++ H +  + M   Q
Sbjct: 199 VSSLNLIMGNKLSVLAGDFLLSRACVALAALGNT---EVVSLMATAVEHLVTGETM---Q 252

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   +++             KT +L+  +C++ AI+A  +         +G NLG+ FQL
Sbjct: 253 ISTSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTTEVSVLAYEYGRNLGLAFQL 312

Query: 224 ADDLLDCEE 232
            DD+LD   
Sbjct: 313 IDDVLDFTG 321


>gi|86356521|ref|YP_468413.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42]
 gi|86280623|gb|ABC89686.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CFN 42]
          Length = 346

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 65  GGKRLRPMLTLAAASLFDYRGDNHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS    +  +G +  Q+   +
Sbjct: 123 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSSAACVIAEGEVL-QLSVAK 176

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 177 NMETTEDDYLSVIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 236

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 237 DYGGKAADLGK 247


>gi|256961512|ref|ZP_05565683.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
 gi|293385200|ref|ZP_06631019.1| polyprenyl synthetase family protein [Enterococcus faecalis R712]
 gi|293388168|ref|ZP_06632690.1| polyprenyl synthetase family protein [Enterococcus faecalis S613]
 gi|312908285|ref|ZP_07767249.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910643|ref|ZP_07769484.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
 gi|256952008|gb|EEU68640.1| polyprenyl synthetase [Enterococcus faecalis Merz96]
 gi|291077533|gb|EFE14897.1| polyprenyl synthetase family protein [Enterococcus faecalis R712]
 gi|291082408|gb|EFE19371.1| polyprenyl synthetase family protein [Enterococcus faecalis S613]
 gi|310625699|gb|EFQ08982.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 512]
 gi|311289019|gb|EFQ67575.1| polyprenyl synthetase [Enterococcus faecalis DAPTO 516]
          Length = 326

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTA 72
           ++  L +        +QT++ D   + +  A  GGK +R       A L +         
Sbjct: 11  VERSLTETCELIEQTLQTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L++ A++E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+
Sbjct: 71  LKIAASLEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALM 189
                      S+ M       G++ +L G   QM    D  +           KT  L 
Sbjct: 129 DAMNG------SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             +C  GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 181 SLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|45656805|ref|YP_000891.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600041|gb|AAS69528.1| octaprenyl diphosphate synthase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 319

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 12/226 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAIR-YAL-LGGKKIRSFLVTECASLFNVNHL 70
           ++  + D L+ +    ++T  + + ++LS I+ Y +  GGK+IR  L      L   +  
Sbjct: 2   KVSVLKDSLIRKFDKKLETIIREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L VGA  E IH  SL+HDD+  +D    RRG  +V  ++   TAI+AG+ LL    + 
Sbjct: 62  HWLDVGAIAELIHAASLLHDDV--VDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDH 119

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++         + +Q++  L+ +  +      QM   ++  I       I   KT +L  
Sbjct: 120 LNGLGYPELMEVFTQVIKDLSVSELI------QMEWEKNPKITLDIYNKIIYGKTASLFA 173

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             C S  I++  ++ EK++LR FG +LG  FQ  DD +D      K
Sbjct: 174 VVCVSAGILSDKNEKEKKKLRQFGIDLGSFFQKKDDAIDYFTSASK 219


>gi|24215915|ref|NP_713396.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24197125|gb|AAN50414.1| geranylgeranyl pyrophosphate synthase [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 319

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 12/226 (5%)

Query: 15  RIDTILDDLLLQTASHMQT--QHNDRLLSAIR-YAL-LGGKKIRSFLVTECASLFNVNHL 70
           ++  + D L+ +    ++T  + + ++LS I+ Y +  GGK+IR  L      L   +  
Sbjct: 2   KVSVLKDSLIRKFDKKLETIIREDLKILSEIKTYTIQSGGKRIRPILHYCLCQLLGYSGK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L VGA  E IH  SL+HDD+  +D    RRG  +V  ++   TAI+AG+ LL    + 
Sbjct: 62  HWLDVGAIAELIHAASLLHDDV--VDEAETRRGLQSVGSKFGNKTAILAGDYLLACGIDH 119

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++         + +Q++  L+ +  +      QM   ++  I       I   KT +L  
Sbjct: 120 LNGLGYPELMEVFTQVIKDLSVSELI------QMEWEKNPKITLDIYNKIIYGKTASLFA 173

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             C S  I++  ++ EK++LR FG +LG  FQ  DD +D      K
Sbjct: 174 VVCVSAGILSDKNEKEKKKLRQFGIDLGSFFQKKDDAIDYFTSASK 219


>gi|164605004|dbj|BAF98298.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 330

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 28/230 (12%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALR----- 74
           L+      M      +L SA  Y   +G  GK++R  ++   A+  NV+    +      
Sbjct: 87  LVANRLRAMLVSEVPKLASAAEYFFKMGVEGKRLRPTVLLLMATALNVHIHEPMPNGVGD 146

Query: 75  ------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       +    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ 
Sbjct: 147 TLGAELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVAVLAGDF 204

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL+ A   ++S K     ++ + ++  L     +      QM    ++            
Sbjct: 205 LLSRACVALASLKNTEVVSLLATVVEHLVTGETM------QMTSTSEQRCSMDHYMQKTY 258

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KT +L+  +C++ A++A  +         +G++LG+ FQL DD+LD   
Sbjct: 259 YKTASLISDSCKAIALLAGQTTEVAMLAFEYGKSLGLAFQLIDDVLDFTG 308


>gi|134101179|ref|YP_001106840.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291004002|ref|ZP_06561975.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133913802|emb|CAM03915.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 335

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 6/214 (2%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           + +      +   + L    RYALL  GK +R  ++   A     +    +    A+E +
Sbjct: 19  IRRALDARWSGGGEPLDEISRYALLSPGKLLRPLMLVASAEAVGGDREAVMPAALAVEYL 78

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+HDD+  +D    RRG+ +VH +Y    AII G+ L+   F  ++       D +
Sbjct: 79  HAASLVHDDI--IDGDDTRRGRASVHARYGVADAIITGDALIIRLFGSLAECPVPDADVL 136

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIM 199
            +  +L+   +   +G +   +L                 +  +KTGAL   AC++GA++
Sbjct: 137 SAVRILARAGDDLCRGQMREALLVPPAPGALGSGLAAYLGMAALKTGALFRGACQAGAVL 196

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +  E   +  F E+ G+ FQ+ DDLL    D
Sbjct: 197 GGGTPGEVGIVAEFAEHTGLAFQMYDDLLPFLGD 230


>gi|323481190|gb|ADX80629.1| polyprenyl synthetase family protein [Enterococcus faecalis 62]
          Length = 326

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 21/224 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAA 78
           +L+ QT         + L+S  R    GGK +R       A L +         L++ A+
Sbjct: 20  ELIEQTLHTRNEDIEEALVSLAR---SGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAAS 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+      
Sbjct: 77  LEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG- 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                S+ M       G++ +L G   QM    D  +           KTG L   +C  
Sbjct: 134 -----SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTGELFSLSCLE 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 187 GAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|145628195|ref|ZP_01783996.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21]
 gi|144979970|gb|EDJ89629.1| octaprenyl-diphosphate synthase [Haemophilus influenzae 22.1-21]
          Length = 274

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 88/177 (49%), Gaps = 8/177 (4%)

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T + ++    
Sbjct: 1   MIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATANAEFGNAA 58

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           +++ G+ + T AF++++  ++     ++   +++   N+  +G +  Q++++ D    E 
Sbjct: 59  SVLVGDFIYTRAFQLVAQLES-----LKILSIMADATNVLAEGEV-QQLMNVNDPETSEA 112

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               +   KT  L   A ++ AI+A  ++ +++ L+ +G  LG  FQL DD+LD   
Sbjct: 113 NYMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSA 169


>gi|126348100|emb|CAJ89821.1| putative polyprenyl diphosphate synthase [Streptomyces ambofaciens
           ATCC 23877]
          Length = 354

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 2/186 (1%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK +R  L    A     +    +    A+E +H +SL+HDD+  MD    RR +P V
Sbjct: 64  RGGKGVRQALAVLGAEAAGASGRAGVPAAVAVELVHAFSLLHDDI--MDGDPDRRRRPAV 121

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              Y    A++AG+ L   A E ++      +        L+         +L  +    
Sbjct: 122 WKAYGTGPAVLAGDALFALAVETLAVAPAGPRTVRLLSTALNDLVRGQADDLLFAERPWT 181

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             E +   +   + + KTG+L+  A   GA++  A +     L   G  LG+ FQ+ DD+
Sbjct: 182 GPERVRPHEYRAMAEHKTGSLLGCAAAMGAVLGGAPRTTVTALDRAGRQLGVAFQVVDDV 241

Query: 228 LDCEED 233
           L    D
Sbjct: 242 LGIWGD 247


>gi|241203314|ref|YP_002974410.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857204|gb|ACS54871.1| Farnesyltranstransferase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 338

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS    +  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSSAACVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 169 NMETTEDDYLSVIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGKAADLGK 239


>gi|171912385|ref|ZP_02927855.1| Farnesyltranstransferase [Verrucomicrobium spinosum DSM 4136]
          Length = 336

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 11/218 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
             +++LL++ A          +      +   GK+IR  L                ++  
Sbjct: 23  ERVEELLMEQARAFDPNVEGYISYVCNTS---GKRIRPALAVLAGGATGGVTHEHRQLSI 79

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +E IH  SL+HDD+  MD   IRR  PT   ++    +++ G+ L  YA E+     TQ
Sbjct: 80  ILEMIHIASLVHDDI--MDGATIRREMPTAAAKWGNALSVLLGDSLFAYALEL----ATQ 133

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             ++   + +   + ++    +L  Q     D  +   + F I +MKT AL   A E GA
Sbjct: 134 FDESSICRKIARASRDVACGEIL--QTQRRFDFTLSMEEYFKIIEMKTAALFASATELGA 191

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +   S +    +  +G  LG  +Q+ DD +D   D  
Sbjct: 192 RLNGCSDSVVASMYNYGNRLGTAYQIYDDCIDLVGDEK 229


>gi|303326545|ref|ZP_07356988.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
 gi|302864461|gb|EFL87392.1| decaprenyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
          Length = 323

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 15/225 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L ++L      ++  L+         ++         A+     GGK++R  LV   A L
Sbjct: 6   LKARLALELPPVNAALERAAHGLPEPVRPV-------ALHIFEAGGKRLRPLLVVLTARL 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     +   +E +H  +L+HDD+  +DN   RRGKP  H  +D    I+AG+ LL
Sbjct: 59  LGYERADIYDLAVTMEMLHAATLLHDDV--LDNAASRRGKPAAHTIFDVTPTILAGDALL 116

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A  +++       D   S      T       +L   +   +       +   I + K
Sbjct: 117 AQANALVA----GFGDPRLSLCFSEATSRTAAGEILE--IAAQRRVDTSAEEYAEIVRGK 170

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T  L+  +C+ GA+ A  +  + E    +GENLG+ FQ+ DD LD
Sbjct: 171 TAWLIRASCQLGALRAGGTDAQVEAAAAYGENLGMAFQMVDDALD 215


>gi|254283313|ref|ZP_04958281.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
           NOR51-B]
 gi|219679516|gb|EED35865.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
           NOR51-B]
          Length = 292

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 11/218 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTALRVGAAI 79
           DL    A+    +   +L +A+ YA+  GG ++R  L    A+     +   A     AI
Sbjct: 11  DLERAVAAGADERCPPQLANALHYAVFPGGARVRPQLCMAVAAANTGKDPSLAKSAACAI 70

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +HC SL+HDDLP  D+  +RRGKP+VH  + E  A++ G+ L+  AF++++      +
Sbjct: 71  ELLHCASLVHDDLPCFDDATVRRGKPSVHSAFGERIAVLTGDALIVMAFQVLAKGMATAR 130

Query: 140 DNIRSQLMLSLTHN--IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
              R   ++    +      G+  GQ  + +        + +  + KTGAL   A  +GA
Sbjct: 131 YPDRGPAVMGYVADGVAAPCGIAAGQAWECE----QRVDLALYHQSKTGALFIAATCAGA 186

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             A          R  G ++G  +Q+ADD+ D   D+ 
Sbjct: 187 AAAGVDPT---PWRNLGASIGEAYQVADDIKDATSDIE 221


>gi|62959213|gb|AAY23714.1| farnesyl diphosphate synthase [Synechococcus sp. WH 5701]
          Length = 145

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +R+GKPT H  Y E  AI+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDLPGMDNDDLRQGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ++D++ E    +    +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQVVDDILDVE 145


>gi|327192818|gb|EGE59745.1| octaprenyl-diphosphate synthase protein [Rhizobium etli CNPAF512]
          Length = 338

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLAAASLFDYRGENHVKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS    +  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSSAACVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A A ++ +  L+ +G NLG+ FQL DD L
Sbjct: 169 NMETTEDDYLSVIRAKTAALFAAAAEVGPIVAEAGRSGRNALKSYGMNLGLAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGKAADLGK 239


>gi|326336630|ref|ZP_08202798.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691100|gb|EGD33071.1| octaprenyl-diphosphate synthase [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 327

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 14/233 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-- 65
           +++  + I   +     +    M ++    L     Y +   GK++R   V   A L   
Sbjct: 5   IEQIKEPIAQEMATFEDKFRQSMSSRVA-LLNRITHYIVNRKGKQMRPMFVFLVAKLISN 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            + +    R  A IE IH  +L+HDD+  +D+   RRG  +++  +    A++ G+ LL+
Sbjct: 64  GIINERTYRGAAVIELIHTATLVHDDV--VDDSNKRRGFFSINALWKNKIAVLVGDYLLS 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
               ++ S      D ++   ++S+      +G L  QM   +   I E   + I + KT
Sbjct: 122 KG--LLLSIDNNDFDLLK---IISVAVREMSEGELL-QMEKARRLDITEEVYYEIIRQKT 175

Query: 186 GALMCFACESGA-IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED-LPK 236
             L+   C  GA  +A  +    E++R FGE +G+ FQ+ DDL D  E+ + K
Sbjct: 176 ATLIAACCAMGACSVAPENTTLIEKMRLFGECVGMAFQIKDDLFDYTEEAIGK 228


>gi|27261729|gb|AAN86061.1| geranylgeranyl diphosphate synthase [Citrus unshiu]
          Length = 426

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 30/245 (12%)

Query: 10  QENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASL 64
           QE       + D+L  L +    M      +L SA  Y   +G  GK+ R  ++   A+ 
Sbjct: 83  QEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATA 142

Query: 65  FNVNHLTALR-----------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            NV     L                  +    E IH  SL+HDD+  +D+   RRG  ++
Sbjct: 143 LNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSL 200

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           +       A++AG+ LL+ A   ++S K      + + ++  L     +      QM   
Sbjct: 201 NFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETM------QMTTS 254

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D+             KT +L+  +C++ A++A  +         +G+NLG+ +QL DD+
Sbjct: 255 SDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDV 314

Query: 228 LDCEE 232
           LD   
Sbjct: 315 LDFTG 319


>gi|242096724|ref|XP_002438852.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor]
 gi|241917075|gb|EER90219.1| hypothetical protein SORBIDRAFT_10g027240 [Sorghum bicolor]
          Length = 431

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 30/249 (12%)

Query: 6   PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTE 60
            S+ QE     + + D+L  L      M      +L SA  Y       GK+ R  ++  
Sbjct: 84  ASRAQEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLL 143

Query: 61  CASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            AS                            +    E IH  SL+HDD+  +D+   RRG
Sbjct: 144 MASALKFPLSESTEGGVLSILADKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRG 201

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             ++++      +++AG+ LL+ A   +++        + S +  ++ H +  + M   Q
Sbjct: 202 VSSLNLIMGNKLSVLAGDFLLSRACVALAALGNT---EVVSLMATAVEHLVTGETM---Q 255

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   +++             KT +L+  +C++ AI+A  +         +G NLG+ FQL
Sbjct: 256 ISTSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTAEVSVLAYEYGRNLGLAFQL 315

Query: 224 ADDLLDCEE 232
            DD+LD   
Sbjct: 316 IDDVLDFTG 324


>gi|257466362|ref|ZP_05630673.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917518|ref|ZP_07913758.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691393|gb|EFS28228.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 316

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 17/220 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALRVGAAIE 80
           L+   S  +T+    L  A+  +   GK  R+ L+  CASL   +        ++ A +E
Sbjct: 11  LIADYSKKETEVGAVLEDALNAS---GKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVE 67

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H  SLIHDD+  +D+   RRGK ++  +Y +  A+ AG+ L+   +   +  +     
Sbjct: 68  LTHLASLIHDDI--VDDSPYRRGKISIQGKYGKDAAVYAGDFLMARIYYYEAVERLNESA 125

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + S+ +  +           GQ L    E +   + F   + KT AL   AC  GA+ A
Sbjct: 126 ALLSKTVEHMCTGEI------GQDLCRYREDVSVEEYFQNIQGKTAALFETACHIGAMEA 179

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
             SQ   E+L+ FG NLG++FQL DD+LD      ++ K+
Sbjct: 180 GCSQEMIEKLKLFGRNLGMMFQLKDDILDFTSNIDEIGKE 219


>gi|12055493|emb|CAC20852.1| geranyl diphosphat synthase [Quercus robur]
          Length = 416

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 104/249 (41%), Gaps = 30/249 (12%)

Query: 6   PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTE 60
            S ++E +     + D+L  +      M      +L SA  Y   +G  GK+ R  ++  
Sbjct: 69  SSIVEEQNDPFSLVADELSMVANRLRSMVVTEVPKLASAAEYFFKMGVEGKRFRPTVLLL 128

Query: 61  CASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            A+  N++                      R+    E IH  SL+HDD+  +D+   RRG
Sbjct: 129 MATAMNISILEPSLRGPGDALTTELRARQQRIAEITEMIHVASLLHDDV--LDDADTRRG 186

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             +++       A++AG+ LL+ A   ++S K     ++ ++++  L     +      Q
Sbjct: 187 IGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETM------Q 240

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           M    ++             KT +L+  +C++ A++   +         +G+NLG+ +QL
Sbjct: 241 MTTTCEQRCSMEYYMQKTYYKTASLISNSCKAIALLGGQTSEVAMLAYEYGKNLGLAYQL 300

Query: 224 ADDLLDCEE 232
            DD+LD   
Sbjct: 301 IDDVLDFTG 309


>gi|330508568|ref|YP_004384996.1| polyprenyl synthetase [Methanosaeta concilii GP-6]
 gi|328929376|gb|AEB69178.1| polyprenyl synthetase [Methanosaeta concilii GP-6]
          Length = 311

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 94/203 (46%), Gaps = 14/203 (6%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           + A+ ++   +  L   + Y L   GK++R  ++   A         ++    AIE +H 
Sbjct: 14  ELAALVRDLPDSPLGEILSYVLSAPGKRVRPLILILSAEALGTPPAQSISAALAIELVHA 73

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+HDD+  +D+G  RRG P+   ++    +++AG+ L++ + ++IS     +      
Sbjct: 74  ASLVHDDI--LDHGIERRGSPSALERFGPEASLLAGDWLISRSIDLISGYSQPV------ 125

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
                   +     M  G+++D+          +     KT +L   + + G +++ A +
Sbjct: 126 ----IRAFSRACMDMSEGELMDLSCAG-SPEDYYQCITRKTASLFSASAKIGGLISGAGE 180

Query: 205 NEKERLRCFGENLGIIFQLADDL 227
            +  RL  +G +LG+ +Q+ DDL
Sbjct: 181 EDVARLESYGLHLGLGYQVLDDL 203


>gi|294794043|ref|ZP_06759180.1| putative heptaprenyl diphosphate synthase component II [Veillonella
           sp. 3_1_44]
 gi|294455613|gb|EFG23985.1| putative heptaprenyl diphosphate synthase component II [Veillonella
           sp. 3_1_44]
          Length = 323

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           E  +RI   L+ +    AS   T   D   L+  +  +  GGK++R+ L    A+     
Sbjct: 8   EIMERIALDLEHVEESLASSFNTGAEDFNALIRPL--SAAGGKRLRAQLCLLIANAGTSI 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +++  A+E +H  +LIHDD+  +D   IRRG+ T+H+      AI++G+ L   AF
Sbjct: 66  ERQRIKIAEAVEMLHLATLIHDDV--LDQAEIRRGEDTIHMHKGNKVAILSGDYLFAKAF 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKT 185
           +I+S        N++   + S      +  ++ G+ + ++D +       +     + KT
Sbjct: 124 KIVSEMT-----NMKYLQVFSH----IITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKT 174

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              M    E G ++    ++E   L+ +G  LG+ FQ+ DD++D 
Sbjct: 175 ADFMEGCMELGGLLGDWQESEIIELKKYGHALGMAFQITDDIMDY 219


>gi|320451263|ref|YP_004203359.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01]
 gi|320151432|gb|ADW22810.1| octaprenyl-diphosphate synthase [Thermus scotoductus SA-01]
          Length = 314

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 16/224 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L+    R +  L +L+      ++  H D +         GGK+IR  LV   +      
Sbjct: 6   LEAPLNRFEEALSELIASDVLFVRLIHQDLV-------TAGGKRIRPRLVFLASRAIGGA 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +  A+E +H  +L+HDDL  +D+   RRGK     +Y    ++++G+ LL+   
Sbjct: 59  PFE-MELALAVELLHSATLLHDDL--IDDAETRRGKEAAFRRYGNAVSVLSGDFLLSRLL 115

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            +I+           +Q+  +L+    LQ  +         E         I   KT  L
Sbjct: 116 HVIAKTGRMELVERFAQVAKTLSEGEVLQFQVAAL------EDYSLENYERIITAKTAVL 169

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           M  + E  A++       +E L  FG   G  FQ+ DD LD   
Sbjct: 170 MELSTEGPALLKGVDGEVREALARFGLYYGQAFQMRDDYLDLMG 213


>gi|18312349|ref|NP_559016.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18159799|gb|AAL63198.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 334

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 17/235 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            +  + ++  L+  L                 A+ Y +  GGK++R  L    A   +  
Sbjct: 9   AKYGEAVEQALERYL-------SIDLAPDFRDAVMYQVKTGGKRLRPLLTLATAEAISGQ 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL   A +E IH YSLI+DD+  +D G +RRG PTV   Y +  AI+ G        
Sbjct: 62  WKPALPAAAIVELIHNYSLIYDDI--IDRGDLRRGMPTVRKAYGDNAAILIGIWYREAIE 119

Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------QMLDIQDEFIDETQVFMIQ 181
           E ++ +PK  L     ++++ ++     L  +           +  +   +       + 
Sbjct: 120 EAVLDTPKPTLFAREVAKVIKAIDEGERLDILFEYAGREDPYFVKARWREVTLDDYIKMV 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +KTG L+  A + GA+         +    FG N G+ FQ+ DD+LD   D  K
Sbjct: 180 SLKTGVLIGAAAKWGALSVSDDAEIADAAWNFGLNAGVAFQVIDDVLDIYGDPKK 234


>gi|295113304|emb|CBL31941.1| Geranylgeranyl pyrophosphate synthase [Enterococcus sp. 7L76]
 gi|315161451|gb|EFU05468.1| polyprenyl synthetase [Enterococcus faecalis TX0645]
          Length = 326

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 21/224 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAA 78
           +L+ QT         + L+S  R    GGK +R       A L +         L++ A+
Sbjct: 20  ELIEQTLHTRNEDIEEALVSLAR---SGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAAS 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+      
Sbjct: 77  LEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG- 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                S+ M       G++ +L G   QM    D  +           KT  L   +C  
Sbjct: 134 -----SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLE 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 187 GAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|257784150|ref|YP_003179367.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469]
 gi|257472657|gb|ACV50776.1| Polyprenyl synthetase [Atopobium parvulum DSM 20469]
          Length = 347

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 98/250 (39%), Gaps = 22/250 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS---------AIRYALLGGK 51
           MN      L++    ++  +   L   ++      ++R  +            ++  GGK
Sbjct: 1   MN--FADYLKQKLPAVEAEIMRGLPAASTSPANASSERTHADLNTYLYQPLAHFSAGGGK 58

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
           ++R  L    A     +   AL VG AIE     +LIHDD+   D   +RRG+  ++   
Sbjct: 59  RVRPVLCCLGAEAVGGSAEAALPVGCAIEDFQSAALIHDDIA--DKSELRRGEKCLYKTL 116

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD----- 166
               AI  G+  L      ++     L D I+ +++         +  L GQ LD     
Sbjct: 117 GTGLAINVGDSALVNVVRRVTVAD-HLSDQIKVRVI--DALLSMEEHTLEGQALDLGWAQ 173

Query: 167 IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            +   +   Q   +   KT      +    GA++  A Q   + L+ FG  +G+ FQL D
Sbjct: 174 NERWDVTSDQYLFMALSKTAYYSAAYPLVLGALIGGADQKTLDALKDFGLKVGLAFQLQD 233

Query: 226 DLLDCEEDLP 235
           DLL+   D  
Sbjct: 234 DLLNLVGDAK 243


>gi|61653218|gb|AAX48172.1| geranylgeranyl pyrophosphate synthase [uncultured proteobacterium
           DelRiverFos13D03]
          Length = 293

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 12/219 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
            R+D     +L +    M      +L  A+ YA+  GG +IR  ++   A     +    
Sbjct: 5   DRLDAATARVLARA---MGGDAPAQLAQALHYAVTPGGARIRPTILLSVAMACGDDRPAL 61

Query: 73  LRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                 A+E IHC SL+HDDLP  D+   RRGK TVH  + E  A++ G+ L+  AF+I+
Sbjct: 62  SDAGAVALEMIHCASLVHDDLPCFDDADTRRGKATVHKAFSEPLAVLTGDSLIVLAFDIL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +             + +         G+  GQ  + +     E  +    + KTGAL   
Sbjct: 122 AEAAGDDAKRALQMIRVLSRRTGMPDGICAGQGWESEA----EVNLSAYHRAKTGALFIA 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A + GA+ A       E     G  +G  FQ+ADDL D 
Sbjct: 178 ATQMGALAAGQD---CEPWEELGARIGEAFQVADDLRDA 213


>gi|8272412|dbj|BAA96458.1| farnesyl diphosphate synthase [Rhodobacter capsulatus]
          Length = 288

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 84/228 (36%), Positives = 127/228 (55%), Gaps = 8/228 (3%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
            S+R+  + D +    A+ +       L  A+ YA  GGK++R+FL  E A++  ++   
Sbjct: 2   FSERLKEVQDGVEAAMAAAIGRLPAGDLRDAMAYAAQGGKRLRAFLAIESAAIHGISMEQ 61

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A+    A+E +H YSL+HDD+P MDN  +RRG PTVH ++DE TA++AG+ L T AFE+ 
Sbjct: 62  AMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHRKWDEATAVLAGDALQTLAFELC 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGA 187
           + P     +N R  L+ +L    G +GM+ GQ LDI  E     +   ++  +Q  KTGA
Sbjct: 122 TDPVLGSAEN-RVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRLQAGKTGA 180

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L+ FA ++GAI+A A +                FQ+ADD+LD E D  
Sbjct: 181 LISFAAQAGAIIAGADRALLAAYATALGL---AFQIADDILDVEGDEE 225


>gi|239918251|ref|YP_002957809.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|281415557|ref|ZP_06247299.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|239839458|gb|ACS31255.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
          Length = 354

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/244 (25%), Positives = 110/244 (45%), Gaps = 39/244 (15%)

Query: 7   SKLQENSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + L++  +++D+ L  DDL   TA+H        L++A      GGK++R  L    + L
Sbjct: 29  TALEQVEEQLDSALGFDDLFSDTAAH-------HLMAA------GGKRVRPVLTVLASLL 75

Query: 65  FNVN---------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            +              A +    +E  H  +L HDD+  MD   +RRG P  H  +    
Sbjct: 76  GDPALASGEVADVDAPARQAAVVMELTHLATLYHDDV--MDEAPVRRGAPAAHRLWGNSA 133

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFID 173
           AI+AG+ +   A ++++   T+                   + ++ GQ+ + +   E  D
Sbjct: 134 AILAGDLIFARASQLMAELGTRPV----------QIQADTFERLVQGQLWETRGPAEGTD 183

Query: 174 E-TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                + +   KTG+L+  A   GA++  A +   + +R +GE +G+ FQLADDL+D   
Sbjct: 184 PIEHYYAVLSGKTGSLIAAAGMLGALLGGADEAAVQVMRAYGEKVGLAFQLADDLIDLTG 243

Query: 233 DLPK 236
           D  +
Sbjct: 244 DTER 247


>gi|313887289|ref|ZP_07820980.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923208|gb|EFR34026.1| polyprenyl synthetase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 328

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 16/235 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYA-LLGGKKIRSFLVTECASLF 65
           QE  +++   + D + +     +         L  A+ +  L  GK IR  +V  CA L 
Sbjct: 4   QEEREQLLVPIADFIKEFEQDFRQSLQCDAPVLSHALEHLRLSSGKHIRPIIVGLCAQLC 63

Query: 66  -NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               +   L     IE +H  SLIHDD+  +D    RRG+PT++  Y    A++ G+ +L
Sbjct: 64  AGQTNEQTLSAALVIELLHTASLIHDDV--IDWSDTRRGQPTLNALYSNHQAVLMGDYVL 121

Query: 125 TYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           + AF E++S   T     + +Q    L+    +      Q+   +     E   + +   
Sbjct: 122 STAFLELVSREHTPEMLRVVAQAGRDLSIGELM------QLSLSKAHTYREEDYYAVVDR 175

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
           KTGAL   + + GA+   A++ + +R    G+ +G  FQL DDL D ++  D+ K
Sbjct: 176 KTGALFEASAKLGALSVDATEEQVKRCSRLGQLMGRAFQLQDDLFDYDKALDVGK 230


>gi|182437084|ref|YP_001824803.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178465600|dbj|BAG20120.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 356

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 24/241 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L  ++    ++++T L     +       +    L++A      GGK++R  L    A
Sbjct: 36  SALERRVLRGLEQVETRLLKCAGEAEDPRLAEVAGHLIAA------GGKRLRPLLTLLGA 89

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              +V     +      E IH  SL HDD+  MD   +R G  +V+ ++    A+ +GN 
Sbjct: 90  EFGDVRGEGVIEAAVVAELIHTASLHHDDV--MDEALLRHGVSSVNARWGNTVAVRSGNW 147

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFM 179
           LL  A  + +S   +                   + ++ GQ+ ++          +  F 
Sbjct: 148 LLARAARLSASLAPEAIPL----------QAEASERLVRGQLRELVGPDGAERRLSHYFA 197

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           +   K+ +L+  +   GA+ A A     E L  +GE+LG+ FQ++DDLLD      +L K
Sbjct: 198 VISDKSASLISLSLRLGAVQAGAPAGVGEALAAYGEHLGVAFQISDDLLDITSSSAELGK 257

Query: 237 K 237
           +
Sbjct: 258 E 258


>gi|296090181|emb|CBI40000.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 37/252 (14%)

Query: 10  QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFL 57
           QE+S   +  LD          LL      M      +L SA  Y   +G  GK+ R  +
Sbjct: 72  QESSSLAEEQLDPFSLVADELSLLADRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTV 131

Query: 58  VTECASLFNVN-HLTALR----------------VGAAIECIHCYSLIHDDLPSMDNGYI 100
           +   A+  NV     AL                 +    E IH  SL+HDD+  +D+   
Sbjct: 132 LLLMATALNVPLPRPALAEVPETLSTELRTRQQCIAEITEMIHVASLLHDDV--LDDAET 189

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  +++I      A++AG+ LL+ A   ++S K     ++ + ++  L     +    
Sbjct: 190 RRGIGSLNIMMGNKVAVLAGDFLLSRACVALASLKNTEVVSLLATVVEHLVTGETM---- 245

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             QM    ++ +           KT +L+  +C++ A++A  +         +G+NLG+ 
Sbjct: 246 --QMTSTSEQRVSMEYYLQKTYYKTASLISNSCKAIALLAGQTAEVSMLAFEYGKNLGLA 303

Query: 221 FQLADDLLDCEE 232
           FQL DD+LD   
Sbjct: 304 FQLIDDVLDFTG 315


>gi|160883389|ref|ZP_02064392.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483]
 gi|237720619|ref|ZP_04551100.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4]
 gi|260172659|ref|ZP_05759071.1| octaprenyl-diphosphate synthase [Bacteroides sp. D2]
 gi|293368662|ref|ZP_06615269.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
 gi|315920952|ref|ZP_07917192.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156111109|gb|EDO12854.1| hypothetical protein BACOVA_01358 [Bacteroides ovatus ATCC 8483]
 gi|229450370|gb|EEO56161.1| octaprenyl-diphosphate synthase [Bacteroides sp. 2_2_4]
 gi|292636304|gb|EFF54789.1| polyprenyl synthetase [Bacteroides ovatus SD CMC 3f]
 gi|313694827|gb|EFS31662.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 324

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 8/182 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+     + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVARLYGAICPSTLHAAVSLELLHTASLVHDDV--VDESSERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  +         +L ++ R   ++S        G L  Q+ ++ +
Sbjct: 103 IFNNKVAVLTGDYLLATSL-----VHAELTNSHRIIQLVSTLGQDLADGELL-QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT AL     ++ A      + E E  R  GE +GI FQ+ DD+ D
Sbjct: 157 HSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIFD 216

Query: 230 CE 231
             
Sbjct: 217 YF 218


>gi|56695165|ref|YP_165512.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
 gi|56676902|gb|AAV93568.1| farnesyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
          Length = 288

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 15/236 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              +L +++  I    D +L              +  A+ +   GGK++R FLV E A L
Sbjct: 2   FHERLAQDAALIQRSFDTVL-------GALEPLDITRAMAWTTEGGKRLRGFLVLESARL 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            +V+   A+    AIE +H YSL+HDDLP MD+  +RRG+PT H+++DE TA++AG+ L 
Sbjct: 55  HDVDEARAIWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALH 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           + AFE+ + P+       R+ L L+L    G +GM+ GQ LDI  E     +   Q+  +
Sbjct: 115 SLAFELCTRPEVG-TAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLTLDQITRL 173

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           Q  KTGAL+ +A  +GA++A A  +    LR +   LG+ FQ+ADD+LD E D  K
Sbjct: 174 QAGKTGALIEWAAAAGAVLAGADPD---PLRQYARALGLAFQIADDILDVEGDAEK 226


>gi|315635812|ref|ZP_07891074.1| polyprenyl synthetase [Arcobacter butzleri JV22]
 gi|315479791|gb|EFU70462.1| polyprenyl synthetase [Arcobacter butzleri JV22]
          Length = 299

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  + +   ++  +         +  D+L +        GK +RS L+ + A      + 
Sbjct: 2   EELELVKNQIEKFVEVCNYEKSLELLDKLAT--------GKMLRSKLILKIA----GINE 49

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            ++++ A +E IH  SL+HDD+  +D    RRG+P+V+  YD  T+I+ G+ L + AF  
Sbjct: 50  ESIKLCAIVEMIHAASLLHDDV--IDEADTRRGQPSVNALYDNKTSIMFGDILYSRAFTE 107

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +S          R    +S    +   G +    L  Q      T+   +   KT +L+ 
Sbjct: 108 LSQMDK------RVAYHISNAVTLLSIGEMMDVDLT-QSFNTSYTKYLDMIYKKTASLIE 160

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  S AI+ +  +   E+   +G+NLG+ FQ+ DD+LD  +D  
Sbjct: 161 ASARSAAILVNLDE---EKYATYGKNLGLAFQMIDDILDITQDSK 202


>gi|315146167|gb|EFT90183.1| polyprenyl synthetase [Enterococcus faecalis TX4244]
          Length = 326

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 21/224 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAA 78
           +L+ QT         + L++  R    GGK +R       A L +         L++ A+
Sbjct: 20  ELIEQTLHTRNEDIEEALVTLAR---SGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAAS 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+      
Sbjct: 77  LEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG- 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                S+ M       G++ +L G   QM    D  +           KT  L   +C  
Sbjct: 134 -----SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLE 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 187 GAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|257452495|ref|ZP_05617794.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_5R]
 gi|317059036|ref|ZP_07923521.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_5R]
 gi|313684712|gb|EFS21547.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_5R]
          Length = 316

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 17/220 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL---FNVNHLTALRVGAAIE 80
           L+   S  +T+    L  A+  +   GK  R+ L+  CASL   +        ++ A +E
Sbjct: 11  LIADYSKKETEVGAVLEDALNAS---GKMFRTKLLLFCASLGPCYEEKKEKLCKLAAMVE 67

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H  SLIHDD+  +D+   RRGK ++  +Y +  A+ AG+ L+   +   +  +     
Sbjct: 68  LTHLASLIHDDI--VDDSPYRRGKISIQGKYGKDAAVYAGDFLMARIYYYEAVERLNESA 125

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + S+ +  +           GQ L    E +   + F   + KT AL   AC  GA+ A
Sbjct: 126 ALLSKTVEHMCTGEI------GQDLCRYREDVSVEEYFQNIQGKTAALFETACHIGAMEA 179

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
             SQ   E+L+ FG NLG++FQL DD+LD      ++ K+
Sbjct: 180 GCSQEMIEKLKLFGRNLGMMFQLKDDILDFTSNMDEIGKE 219


>gi|313836214|gb|EFS73928.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2]
 gi|314927649|gb|EFS91480.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1]
 gi|314971352|gb|EFT15450.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3]
          Length = 365

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 17/215 (7%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIE 80
           L+              +  A  + +  GGK+ R  LV  C+      +    +R    +E
Sbjct: 60  LIEDELGRQAGADTPFVAEAANHIISAGGKRFRPLLVVLCSQFGHEADEADLVRAAVVVE 119

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H  SL HDD+  MD    RRG P+ ++++    AI+ G+ L + A   ++       D
Sbjct: 120 LTHVASLYHDDV--MDEASKRRGAPSANLRWGNSVAIMVGDYLFSKASLAVAELGV---D 174

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGA 197
            +R Q             ++ GQ+ + +     E        +   KTG+L+  +   GA
Sbjct: 175 FVRLQ-------ARTFSRLVQGQIAETRGPSQGEDPLAHYLKVVADKTGSLIATSAVFGA 227

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +++HAS      L  FGE++G +FQLADDL+D   
Sbjct: 228 MVSHASAENVTALEQFGEDIGEVFQLADDLIDVTS 262


>gi|89069936|ref|ZP_01157269.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516]
 gi|89044490|gb|EAR50618.1| farnesyl diphosphate synthase [Oceanicola granulosus HTCC2516]
          Length = 289

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 87/202 (43%), Positives = 112/202 (55%), Gaps = 9/202 (4%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
            L +A  YAL GGK +R+FLV E A L  +    AL   AAIEC+H YSL+HDDLP+MD+
Sbjct: 30  PLEAASDYALEGGKGLRAFLVLEGARLCGLAPGAALGAAAAIECVHAYSLVHDDLPAMDD 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             IRRG+PTVH  +DE TAI+ G+ L   AFE + +            L   L    G +
Sbjct: 90  DDIRRGRPTVHKAWDEATAILVGDALQALAFEEVLACDA--PPERLVALARGLAEAAGAR 147

Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           GM+ GQMLDI  E     +    V  IQ  KTGAL+ ++  +GA +A A          +
Sbjct: 148 GMVAGQMLDIAAESAVAPMTLADVERIQSHKTGALIVWSATAGAHLAGADP---APFARY 204

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
           G  LG+ FQ+ADDLLD   D  
Sbjct: 205 GAALGLAFQIADDLLDATGDAA 226


>gi|296119175|ref|ZP_06837745.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967801|gb|EFG81056.1| trans-hexaprenyltranstransferase [Corynebacterium ammoniagenes DSM
           20306]
          Length = 366

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L  ++      ++ +L D   + AS +          A   +  GGK+ R  +    
Sbjct: 47  DDQLNDRVAAGVAAVERLLHDETNRGASFVSD-------KAQHLSEAGGKRFRPIMSLLS 99

Query: 62  ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +   +       ++    +E +H  +L HDD+  MD    RRG  + + +++   AI+AG
Sbjct: 100 SEFGSEPGSEKVIKAATVVEMVHVATLYHDDV--MDEADRRRGVESANSRWNNSVAILAG 157

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVF 178
           + LL +A  ++S   T   +                + ++ GQM +     E        
Sbjct: 158 DALLAHASRLMSQLDTHTVEQ----------FAATFEELVTGQMRETVGAGEANPIDHYM 207

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + + KT  L+  A   GA  + A +   E LR  G  +G++FQ+ DD++D   +
Sbjct: 208 KVIQEKTAVLIASAGYFGAYHSGAPKEHAEALRTIGGAIGMVFQIVDDIIDIFSE 262


>gi|301091604|ref|XP_002895983.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095707|gb|EEY53759.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 436

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 28/247 (11%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECAS 63
            S L +    ++  +  +       + + H   L +  RY     GGKK+R  +V   + 
Sbjct: 99  SSNLADPFTLVEQDMVSVNHSIKRILGSDHPV-LAAVARYFFEHDGGKKVRPTMVLLVSR 157

Query: 64  LFNVNHLTA-----------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
               +                      R+    E IH  SL+HDD+  +D    RRG+P+
Sbjct: 158 AAEAHRRATDTPLPETQSEEYMHAAQQRLAEITEMIHTASLMHDDV--IDEADTRRGRPS 215

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ-ML 165
           V+  +    A++AG+ LL  +  +++  +     N+ +  ++S +    ++G +      
Sbjct: 216 VNKVFGGKMAVLAGDFLLARSSVLLARLR-----NLEAVELMSTSIEHLVKGEVMQMKNA 270

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           D +D+             KTG+LM  +C++   +    Q+  +    FG ++G+ FQL D
Sbjct: 271 DARDDISPFEYYLRKNYYKTGSLMSNSCKAALALGKHDQHICDLGFAFGRHIGLAFQLID 330

Query: 226 DLLDCEE 232
           D+LD E 
Sbjct: 331 DVLDYEG 337


>gi|73667942|ref|YP_303957.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro]
 gi|72395104|gb|AAZ69377.1| polyprenyl synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 285

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 24/233 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
            E  + +++ ++  + Q       +  + + +       GGK+IR  ++   + + + ++
Sbjct: 6   WEEYRYVESGINSFIDQMDESSLKKMAEHVCN------TGGKRIRPIILLLSSEICSGSY 59

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             +L    AIE +H  SLIHDDL  +D G +RR  P+   ++    A++ G+ L+   FE
Sbjct: 60  QQSLNAALAIELMHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSRALLCGDYLIAKCFE 117

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGA 187
            IS    ++  +                 M  G++LD++   +   E   F     KT +
Sbjct: 118 FISPYGEKVVRD----------FGKAGMDMAEGEVLDLRLDKDNFGENNYFECIYKKTAS 167

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDLPK 236
           L   +   GA    A +   ER   FG  LG  +Q+ DD+L+     E    K
Sbjct: 168 LFAISASIGAYTGGADEVLAERFNFFGNCLGTAYQIVDDILEFLEVVEGKESK 220


>gi|260905104|ref|ZP_05913426.1| farnesyl pyrophosphate synthetase [Brevibacterium linens BL2]
          Length = 336

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 22/233 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + +    + ++  L ++  QT   +    +  LL+A      GGK+ R  L+   
Sbjct: 14  DAQLAADISTQLEAVERRLYEVTEQTRK-LPDTTSKHLLAA------GGKRARPNLLLLT 66

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L   N    +    A+E IH  SL HDD+  MD+  +RRG P  H  +    AI+ G+
Sbjct: 67  ARLGEANRDAIIDAAVAVELIHLASLYHDDV--MDDAPVRRGAPAAHEVWGNSVAILTGD 124

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVF 178
            L + A  + +    +                   + ++ GQ+ +      D        
Sbjct: 125 LLFSKASGVTAKLGPEAV----------RVQAETFERLVLGQLNEFAGPPEDADAIEHYI 174

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +   KTG+L+  + + G + + A Q+  E +R FGE +GI FQLADD++D  
Sbjct: 175 QVLADKTGSLIATSAQFGVMFSQADQSLAEPVRIFGERVGIAFQLADDIIDLT 227


>gi|257790345|ref|YP_003180951.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243]
 gi|317489792|ref|ZP_07948291.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA]
 gi|257474242|gb|ACV54562.1| Polyprenyl synthetase [Eggerthella lenta DSM 2243]
 gi|316911138|gb|EFV32748.1| polyprenyl synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 349

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 15/237 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVTEC 61
                 L   + R+  +++  + +       ++   L    + Y+  GGK+ R  +    
Sbjct: 16  ESFEQYLTSYADRVGDLVNSFIPKGTHADMDRY---LYQPLMAYSQNGGKRHRPLICFAA 72

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +   A    AAIE  H  +LIHDD+   D   +RRG+P +H+      AI AG+
Sbjct: 73  CRAVGGDMARATSAAAAIEHFHTAALIHDDIA--DEAELRRGEPCMHLTEGMGLAINAGD 130

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQ 176
             L+     + S +  L D  + +++  L      +  + GQ LDI         I    
Sbjct: 131 LALSLVNGTVVSDEN-LDDATKVRVITELID--MTRRTIEGQALDIGWARDGRYDITPED 187

Query: 177 VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             ++   KT           GAI+   ++ E E LR +G + G+ FQ+ DDLL+   
Sbjct: 188 YLVMATHKTAHYSGAVPLAIGAIIGGGTEVEVEALRNYGLDTGLAFQIQDDLLNLVG 244


>gi|256853573|ref|ZP_05558938.1| polyprenyl synthetase [Enterococcus faecalis T8]
 gi|256710516|gb|EEU25559.1| polyprenyl synthetase [Enterococcus faecalis T8]
 gi|315028578|gb|EFT40510.1| polyprenyl synthetase [Enterococcus faecalis TX4000]
          Length = 326

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 21/224 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAA 78
           +L+ QT         + L++  R    GGK +R       A L +         L++ A+
Sbjct: 20  ELIEQTLHTRNEDIEEALVTLAR---SGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAAS 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+      
Sbjct: 77  LEILHMATLIHDDI--IDDSPLRRGTVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG- 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                S+ M       G++ +L G   QM    D  +           KT  L   +C  
Sbjct: 134 -----SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLE 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 187 GAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|86739265|ref|YP_479665.1| polyprenyl synthetase [Frankia sp. CcI3]
 gi|86566127|gb|ABD09936.1| Polyprenyl synthetase [Frankia sp. CcI3]
          Length = 338

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L   ++    R++ +L + + ++ S   T+ +  L+ A      GGK+ R  +V   
Sbjct: 14  DPDLEKAVRVGLARVEDLLRESV-RSESAFVTETSRHLVDA------GGKRFRPIVVLLA 66

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +   +  +    AIE  H  +L HDD+  MD    RRG  + + ++    AI+ G+
Sbjct: 67  AQFADPEAVGVVPAAVAIELTHLSTLYHDDV--MDEAPRRRGAASANTRWTNTVAILTGD 124

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            L   A +I +    +    I ++ + +         +  GQ+ +       +       
Sbjct: 125 YLFARASDITADLGPE-ATRILARTIAT---------LCEGQIRETVGPAPGQDPVEHYL 174

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KT +L+  +   GA++A A     + L  FGE  G+ FQL+DD++D   D
Sbjct: 175 RVITDKTASLIATSGRLGAMLAGADPITVDTLATFGELFGVAFQLSDDIIDVASD 229


>gi|21226891|ref|NP_632813.1| farnesyltranstransferase [Methanosarcina mazei Go1]
 gi|20905197|gb|AAM30485.1| Geranyltranstransferase [Methanosarcina mazei Go1]
          Length = 295

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 24/233 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
            E  + ++  + + +    + ++     +++  + ++  GGK+IR  ++   + + + ++
Sbjct: 16  WEEYRYVEAGIKESI----TLIEDPGLKKMVEHVCHS--GGKRIRPIILLLVSEICSGSY 69

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             +L    A+E +H  SLIHDDL  +D G +RR  P+   ++    A++ G+ L+  +  
Sbjct: 70  SRSLNAALAVEMMHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKSIA 127

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA 187
            IS            + ++      G+  M  G++LD+  +DE   E   F     KT +
Sbjct: 128 FIS---------PYGEKVIQDFGKAGMD-MAEGEVLDLKLEDESFGENDYFKCIYKKTAS 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDLPK 236
           L   +   GA    A +   ER   FG  LG  +Q+ DD+L+     E    K
Sbjct: 178 LFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEFLEVVEGKESK 230


>gi|270001562|gb|EEZ98009.1| hypothetical protein TcasGA2_TC000408 [Tribolium castaneum]
          Length = 339

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 18/240 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLG-GKKIRSFLVTE 60
           G LP    +    ++  L D+ +     ++ + + D L     Y   G GK IR  +   
Sbjct: 7   GSLPEYQVDPYHLLEDDLKDVYVYIRDALRRSTYQDDLYEIATYYFDGHGKAIRPMVAIL 66

Query: 61  CASLFNVNH--------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
            A   N +          +   V    E IH  SL+HDD+  +D    RRGKP+V++ ++
Sbjct: 67  MARAINYHIYKEKSGLLTSQREVAMISEMIHTASLVHDDV--IDQSDFRRGKPSVNVMWN 124

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
                +AG+ +L  A  +I+  K      + SQ++  L     +      Q+   + E  
Sbjct: 125 HKKVTMAGDFILAVASIMIARLKNNDVTLVLSQVVSDLVQGEFM------QLGSKETENE 178

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                      KT +L+  + +S  ++A A +   +    +G NLG+ FQL DDLLD   
Sbjct: 179 RFAHYLTKTYRKTASLIANSVKSVTMLAGADEQLSDISYQYGRNLGLAFQLVDDLLDFVS 238


>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
 gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
          Length = 363

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 14/239 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
           +    S L   ++ +   LD       +    +  + L  ++RY+ L GGK++R  L   
Sbjct: 64  SFDFESYLSAKARAVHDALD------LTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIA 117

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+ V  A+E IH  SLIHDD+P MD+  +RRG+P+ H+ + E TA++AG
Sbjct: 118 ACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAG 177

Query: 121 NGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----ID 173
           + LL  AFE ++  S    +  +   + ++ L    G+ G+  GQ+ D+  E      + 
Sbjct: 178 DALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVS 237

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +  I   KT  L+  A  SGA++      E ER+R +   LG++ Q+ DD+LD   
Sbjct: 238 LGALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTG 296


>gi|315638153|ref|ZP_07893335.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21]
 gi|315481689|gb|EFU72311.1| octaprenyl-diphosphate synthase [Campylobacter upsaliensis JV21]
          Length = 297

 Score =  159 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + ID I+ + LL+ A           +  +      GKK+RS L+   A         A 
Sbjct: 2   QEIDKIIQNYLLELAYEP--------ILTMLSKTNTGKKLRSKLLLSIA----GESQKAY 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A IE IH  SL+HDD+  +D   +RRG  +++ ++    A++ G+ L + AF  +S 
Sbjct: 50  VLCAIIELIHLASLLHDDI--IDESELRRGARSINAEFGAKNALMLGDILYSKAFYELS- 106

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                K   +   +LS        G L    L  +    D+     +   KT  L+  + 
Sbjct: 107 -----KQEAKISQILSNAVCKLAIGELMDVNLSKEF-NPDKEAYLTMIYHKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA++A   +N       +G+NLG+ FQ+ DD+LD   D  
Sbjct: 161 RCGALLAKLDEN---AFAKYGKNLGLAFQIVDDILDITGDEA 199


>gi|29829548|ref|NP_824182.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29606656|dbj|BAC70717.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
           MA-4680]
          Length = 394

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 17/228 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  + +D++   +      H   +H D   +A       GK IR  LV            
Sbjct: 75  ELRRAVDSLPGSMRRIALHHFGWEHADGTPAAGN----AGKAIRPALVLAAVRALGGPQS 130

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           +A+R  AA+E IH ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A  +
Sbjct: 131 SAVRAAAAVELIHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDADAILAGDALQALAHRL 188

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKT 185
           ++                +      +  +  GQ  D   E      +   +   + + KT
Sbjct: 189 LAEDPHPASAA------AAARLAACVIELCAGQHADTAMERRGPGEVTLDECLAMAEAKT 242

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL+  AC  GA+ A A + + E L  FG   G+ FQL DD++    D
Sbjct: 243 GALLGCACALGALYAGAEEEDVEALDAFGREAGLAFQLIDDVIGIWGD 290


>gi|148273991|ref|YP_001223552.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147831921|emb|CAN02892.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 357

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 11/195 (5%)

Query: 44  RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L  GGK++R  L    A L   N    +    AIE  H  SL HDD+  MD   +RR
Sbjct: 64  RYLLAAGGKRVRPMLALLIAQLGEGNTQQVVDAAVAIEITHLASLYHDDV--MDEADMRR 121

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P+    +    AI+AG+ L   A +I++          R+  + + T    + G L  
Sbjct: 122 GVPSAQAVWGNSVAILAGDLLFARASKIVADLGP------RAIRLQAATFERLVLGQLH- 174

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           + +  +D+         +   KTG+L+  A + G I + A    +  +  FGE  G+ FQ
Sbjct: 175 ETIGPRDDQDPIEHYLDVLADKTGSLIACAAQMGVIYSGADPELESAVLAFGERTGVAFQ 234

Query: 223 LADDLLDCEEDLPKK 237
           L DD+LD   D P++
Sbjct: 235 LVDDVLDL-ADQPEE 248


>gi|327402252|ref|YP_004343090.1| trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823]
 gi|327317760|gb|AEA42252.1| Trans-hexaprenyltranstransferase [Fluviicola taffensis DSM 16823]
          Length = 322

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFN 66
           +QE    I+T +   L +   H   +    LL  I + +    GK++R   +   A +  
Sbjct: 3   VQEILAPIETEMK--LFEVRFHESMKSKVPLLDKITHYIIRRKGKQMRPMFLFLTAKMLG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             +    +  + +E +H  +L+HDD+  +D+   RRG  +V+  +    A++ G+ +L+ 
Sbjct: 61  EVNEKTYQSASLVELLHTATLVHDDV--VDDANERRGFFSVNALWKNKIAVLVGDYMLSR 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
                    +   DNIR+  +++       +G L  Q+   +   I E   F + + KT 
Sbjct: 119 VL-----LHSLENDNIRALQIVARAVREMSEGELL-QIEKARKLDITEEVYFDVIRQKTA 172

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +L+   CES A      ++  +R+R FGE +G+ FQ+ DD+ D 
Sbjct: 173 SLIATVCESAAASVD-REDMADRMRNFGELVGLAFQVKDDIFDY 215


>gi|227530643|ref|ZP_03960692.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC
           49540]
 gi|227349424|gb|EEJ39715.1| trans-hexaprenyltranstransferase [Lactobacillus vaginalis ATCC
           49540]
          Length = 325

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 96/222 (43%), Gaps = 15/222 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LT 71
           +++  L+++       +   + D   +  + A  GGK +R       A L   N      
Sbjct: 11  QLNNALEEVNHLINQRITVNNTDLQAALKQMASKGGKYLRPAFCLTFARLGGKNSWNSSK 70

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +++ +++E +H  +LIHDD+  +D+   RRG P++   + + TA+ +G+ L T  F+++
Sbjct: 71  LIKIASSLEILHMATLIHDDV--IDDSPERRGAPSIQKAFGKDTAVYSGDLLFTVFFDLL 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALM 189
                              T+   ++ +L G++  +   +      + +     KT  L 
Sbjct: 129 VETMESSP--------YLATNAQAMRKILAGELGQMNQRYQQQSLLEYYRNINGKTATLF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             A + GA    A        +  G+N+GI FQ+ DD+LD  
Sbjct: 181 SLAAQEGAHFGGADARTVHLAKHIGQNIGITFQILDDMLDYT 222


>gi|329295597|ref|ZP_08252933.1| Polyprenyl synthetase [Plautia stali symbiont]
          Length = 259

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 70/202 (34%), Positives = 104/202 (51%), Gaps = 13/202 (6%)

Query: 47  LLGGKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           L  GK+IR  L+   A     +      L +  A+E +H  SLI DD+PSMDN  +RRG+
Sbjct: 6   LAPGKRIRPLLLLLAARDMGCDVAQQGILDLACAVEMVHAASLILDDIPSMDNARMRRGR 65

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P +H +Y E  AI+A   LL+ AFE+I+     L    +++ +  L+  +GLQG++ GQ 
Sbjct: 66  PAIHCEYGENVAILAAVALLSRAFEVIA-LAPGLPATHKAEAIAELSSAVGLQGLVQGQF 124

Query: 165 LDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            D+ D         + +  ++KT  L     +  AI A AS   ++RL  F ++LG  FQ
Sbjct: 125 QDLHDGAHSRSPEAITLTNELKTSVLFRATLQMAAIAADASVQVRQRLSYFAQDLGQAFQ 184

Query: 223 LADDL--------LDCEEDLPK 236
           L DDL         DC +D  K
Sbjct: 185 LLDDLADGSKHTGKDCHQDQGK 206


>gi|25027039|ref|NP_737093.1| putative transferase [Corynebacterium efficiens YS-314]
 gi|259508477|ref|ZP_05751377.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
 gi|23492319|dbj|BAC17293.1| putative transferase [Corynebacterium efficiens YS-314]
 gi|259163941|gb|EEW48495.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
          Length = 350

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 15/225 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTA 72
            RID  +  +  +    +    +  +      A  GGK+ R       +           
Sbjct: 36  ARIDNAMQQVEDRLLKELSIGEDFLVDKVTHLARAGGKRFRPMFALLASEFGAKPLSDNV 95

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           ++    +E  H  +L HDD+  MD   +RRG P+ + ++D   AI+AG+ LL +A  I+S
Sbjct: 96  IKAAVVVEITHLATLYHDDV--MDEATMRRGVPSANSRWDNSVAILAGDILLAHASRIMS 153

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMC 190
                       + +       G   ++ GQM +       +       + + KT  L+ 
Sbjct: 154 QLGM--------ETVAHFAETFG--ELVTGQMRETVGARGGDPVDHYMKVIREKTAVLIA 203

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            A   G++ A A+    + L+ FG  +G+IFQ+ DD++D   +  
Sbjct: 204 SAGFLGSMHADATPEHVDALKKFGAAVGMIFQIVDDIIDIFSETA 248


>gi|330465216|ref|YP_004402959.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
 gi|328808187|gb|AEB42359.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
          Length = 316

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 9/215 (4%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +L+ +  +    + +       +A   A  GGK+ R  LV   A   + +    +     
Sbjct: 4   LLEAVEAELRDTVASADPFVTEAARHLADAGGKRFRPLLVALGAQFGDPSRAEIVSAAVV 63

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E  H  +L HDD+  MD   +RRG P+ + ++    AI+ G+ L   A ++ +    + 
Sbjct: 64  VELTHLATLYHDDV--MDEAPVRRGAPSANSRWTNSVAILVGDYLFARAADVAAELGPE- 120

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                +  + + T    + G +  + +  +      T    +   KTG+L+  +   G +
Sbjct: 121 -----AVRLQARTFARLVHGQIA-ETVGPRAGDDPVTHYLRVIAEKTGSLIATSAHFGGL 174

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + A+      L  +GE +G+ FQL+DDLLD   +
Sbjct: 175 FSGATPEHVAALAGYGETIGVAFQLSDDLLDIASE 209


>gi|257069301|ref|YP_003155556.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
 gi|256560119|gb|ACU85966.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
          Length = 335

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 22/237 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L +++ E    I+  L    + T+  M       L+ A      GGK++R  LV   
Sbjct: 12  DEDLATRIVERLGTIEDRL-RASVSTSDDMVRWTGRHLMDA------GGKRVRPMLVLLA 64

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           ASL +++          +E  H  SL HDD+  MD+   RRG  + H  +    AI+ G+
Sbjct: 65  ASLGDIDADGVQDAAVLVELTHLASLYHDDV--MDSAPTRRGTDSAHALWGNNVAILTGD 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVF 178
            L   A  + +   T               H+   + +  GQ+ +       +       
Sbjct: 123 FLFARASGLSARIGTDAVRE----------HSETFERLCLGQLHETVGPKPGDDPFAHYI 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +   KT +L+  A   GA ++ A Q   + +R +GE +G+ FQLADD+LD E D  
Sbjct: 173 SVLSDKTASLLALAGSLGASLSGAPQGSADVMRRYGEKVGVAFQLADDVLDLESDAA 229


>gi|303289847|ref|XP_003064211.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454527|gb|EEH51833.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 324

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 15/206 (7%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTE----CASLFNVNH--LTALRVGAAIECIHCYS 86
           + N  LL+A       GGK++R  LV       A L ++        R+    E IH  S
Sbjct: 27  RKNPLLLAAADQIFGAGGKRLRPVLVFLVARSTAQLMDMPEITDRQRRLAEITEMIHTAS 86

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+  +D+   RRG  T+H  Y    AI+AG+ L   +   +++        + SQ+
Sbjct: 87  LVHDDV--LDDCDTRRGAQTIHTLYGTRVAILAGDFLFAQSSWYLANLDNLEVIKLISQV 144

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +               Q   + +  +           KT +L+  +C+S A+ +  S++ 
Sbjct: 145 IADFADGEIS------QAGALFNCDVTLEGYLEKSHNKTASLIAASCKSAAVFSEVSEDI 198

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
           K  +  +G++LG+ FQ+ DD+LD  +
Sbjct: 199 KVDMYEYGKHLGLAFQVVDDILDFTQ 224


>gi|226493052|ref|NP_001145807.1| hypothetical protein LOC100279314 [Zea mays]
 gi|219884511|gb|ACL52630.1| unknown [Zea mays]
          Length = 428

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 30/249 (12%)

Query: 6   PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTE 60
            S+ QE     + + D+L  L      M      +L SA  Y       GK+ R  ++  
Sbjct: 81  ASRAQEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLL 140

Query: 61  CASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            AS                            +    E IH  SL+HDD+  +D+   RRG
Sbjct: 141 MASALKFPLSESTEGRVLSILADKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRG 198

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
             ++++      +++AG+ LL+ A   +++        + S +  ++ H +  + M   Q
Sbjct: 199 VSSLNLIMGNKLSVLAGDFLLSRACVALAALGNT---EVVSLMATAVEHLVTGETM---Q 252

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +   +++             KT +L+  +C++ AI+A  +         +G NLG+ FQL
Sbjct: 253 ISTSREQRRSMEYYLQKTYYKTASLISNSCKAVAILAGHTTEVSVLAHEYGRNLGLAFQL 312

Query: 224 ADDLLDCEE 232
            DD+LD   
Sbjct: 313 IDDVLDFTG 321


>gi|29376566|ref|NP_815720.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecalis V583]
 gi|227520176|ref|ZP_03950225.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX0104]
 gi|227555390|ref|ZP_03985437.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           HH22]
 gi|229545358|ref|ZP_04434083.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX1322]
 gi|255975461|ref|ZP_05426047.1| polyprenyl synthetase [Enterococcus faecalis T2]
 gi|256619530|ref|ZP_05476376.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
 gi|256762928|ref|ZP_05503508.1| polyprenyl synthetase [Enterococcus faecalis T3]
 gi|256962662|ref|ZP_05566833.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
 gi|257082182|ref|ZP_05576543.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
 gi|257084800|ref|ZP_05579161.1| polyprenyl synthetase [Enterococcus faecalis Fly1]
 gi|257090333|ref|ZP_05584694.1| polyprenyl synthetase [Enterococcus faecalis CH188]
 gi|257419680|ref|ZP_05596674.1| polyprenyl synthetase [Enterococcus faecalis T11]
 gi|257422162|ref|ZP_05599152.1| polyprenyl synthetase [Enterococcus faecalis X98]
 gi|307272749|ref|ZP_07553996.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
 gi|307275992|ref|ZP_07557125.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
 gi|307277723|ref|ZP_07558809.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
 gi|307287854|ref|ZP_07567887.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
 gi|307295826|ref|ZP_07575658.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
 gi|312900854|ref|ZP_07760148.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
 gi|312902835|ref|ZP_07762039.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
 gi|29344030|gb|AAO81790.1| heptaprenyl diphosphate synthase, component II, putative
           [Enterococcus faecalis V583]
 gi|227072348|gb|EEI10311.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX0104]
 gi|227175504|gb|EEI56476.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           HH22]
 gi|229309565|gb|EEN75552.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           TX1322]
 gi|255968333|gb|EET98955.1| polyprenyl synthetase [Enterococcus faecalis T2]
 gi|256599057|gb|EEU18233.1| polyprenyl synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684179|gb|EEU23874.1| polyprenyl synthetase [Enterococcus faecalis T3]
 gi|256953158|gb|EEU69790.1| polyprenyl synthetase [Enterococcus faecalis HIP11704]
 gi|256990212|gb|EEU77514.1| polyprenyl synthetase [Enterococcus faecalis E1Sol]
 gi|256992830|gb|EEU80132.1| polyprenyl synthetase [Enterococcus faecalis Fly1]
 gi|256999145|gb|EEU85665.1| polyprenyl synthetase [Enterococcus faecalis CH188]
 gi|257161508|gb|EEU91468.1| polyprenyl synthetase [Enterococcus faecalis T11]
 gi|257163986|gb|EEU93946.1| polyprenyl synthetase [Enterococcus faecalis X98]
 gi|306496157|gb|EFM65736.1| polyprenyl synthetase [Enterococcus faecalis TX0411]
 gi|306500999|gb|EFM70306.1| polyprenyl synthetase [Enterococcus faecalis TX0109]
 gi|306505602|gb|EFM74786.1| polyprenyl synthetase [Enterococcus faecalis TX0860]
 gi|306507322|gb|EFM76459.1| polyprenyl synthetase [Enterococcus faecalis TX2134]
 gi|306510363|gb|EFM79386.1| polyprenyl synthetase [Enterococcus faecalis TX0855]
 gi|310633889|gb|EFQ17172.1| polyprenyl synthetase [Enterococcus faecalis TX0635]
 gi|311291953|gb|EFQ70509.1| polyprenyl synthetase [Enterococcus faecalis TX0470]
 gi|315031036|gb|EFT42968.1| polyprenyl synthetase [Enterococcus faecalis TX0017]
 gi|315149250|gb|EFT93266.1| polyprenyl synthetase [Enterococcus faecalis TX0012]
 gi|315157199|gb|EFU01216.1| polyprenyl synthetase [Enterococcus faecalis TX0043]
 gi|315164740|gb|EFU08757.1| polyprenyl synthetase [Enterococcus faecalis TX1302]
 gi|315167570|gb|EFU11587.1| polyprenyl synthetase [Enterococcus faecalis TX1341]
 gi|315171630|gb|EFU15647.1| polyprenyl synthetase [Enterococcus faecalis TX1342]
 gi|315173215|gb|EFU17232.1| polyprenyl synthetase [Enterococcus faecalis TX1346]
 gi|315575049|gb|EFU87240.1| polyprenyl synthetase [Enterococcus faecalis TX0309B]
 gi|315576766|gb|EFU88957.1| polyprenyl synthetase [Enterococcus faecalis TX0630]
 gi|315582475|gb|EFU94666.1| polyprenyl synthetase [Enterococcus faecalis TX0309A]
          Length = 326

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 21/224 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAA 78
           +L+ QT         + L++  R    GGK +R       A L +         L++ A+
Sbjct: 20  ELIEQTLHTRNEDIEEALVTLAR---SGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAAS 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+      
Sbjct: 77  LEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG- 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                S+ M       G++ +L G   QM    D  +           KT  L   +C  
Sbjct: 134 -----SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLE 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 187 GAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|224419075|ref|ZP_03657081.1| polyprenyl synthetase ) [Helicobacter canadensis MIT 98-5491]
 gi|253828013|ref|ZP_04870898.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142585|ref|ZP_07804778.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511419|gb|EES90078.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131616|gb|EFR49233.1| polyprenyl synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 306

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 18/222 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E   +I+  + D L +  S +    + ++ S        GK +RS L    A        
Sbjct: 2   EVLAQINQKIQDFLEELESPIVLGLSQKIQS--------GKMLRSKLALNIA----GESD 49

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             + + A IE I   SL+HDD+  +DN   RR +P+++    +  AI+ G+ L + AF  
Sbjct: 50  ECILLCAIIEMIQNASLLHDDV--IDNATTRRSQPSINAIAGDKNAIMLGDVLYSKAFCE 107

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +S  +       R   ++S    +   G +    L  Q    +E +   + + KT +L+ 
Sbjct: 108 LSDFQESFPMIPR---IVSNAVTLLAIGEMEDVELAKQF-NANEAKYLKMIEHKTASLIE 163

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               + A +A  +Q E +  R +G NLGI FQ+ DD+LD   
Sbjct: 164 STAYAAAFLAGRNQEEAKDFRVYGRNLGIAFQIIDDVLDITA 205


>gi|85373560|ref|YP_457622.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis
           HTCC2594]
 gi|84786643|gb|ABC62825.1| geranylgeranyl pyrophosphate synthase [Erythrobacter litoralis
           HTCC2594]
          Length = 340

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 8/187 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A L         ++ AA+E IH  +L+HDD+  +D   +RRGK   +
Sbjct: 59  GGKRLRPMLTLAGAELVGYQGSRHHKLAAAVEFIHTATLLHDDV--VDGSEMRRGKAAAN 116

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I +     ++ G+ L + AFE+++   +     +R   +LS    +  +G +  Q+   +
Sbjct: 117 IIFGNPATVLVGDFLFSRAFELMTEDGS-----LRVLKILSNASAVIAEGEVA-QLSAQR 170

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                E +   I   KT AL   A    A++A    + +  L  +G NLG+ FQL DD +
Sbjct: 171 KLETSEERYLDIIGAKTAALFAAASRISAVVAECDDSHERALDDYGRNLGVAFQLVDDAI 230

Query: 229 DCEEDLP 235
           D + D  
Sbjct: 231 DYDSDAA 237


>gi|157736647|ref|YP_001489330.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018]
 gi|157698501|gb|ABV66661.1| octaprenyl-diphosphate synthase [Arcobacter butzleri RM4018]
          Length = 299

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 24/225 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  + +   +   +         +  D+L +        GK +RS L+ + A      + 
Sbjct: 2   EELELVKNQIKKFVEVCNYEKSLELLDKLAT--------GKMLRSKLILKIA----GINE 49

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            ++++ A +E IH  SL+HDD+  +D    RRG+P+V+  YD  T+I+ G+ L + AF  
Sbjct: 50  ESIKLCAIVEMIHAASLLHDDV--IDEADTRRGQPSVNALYDNKTSIMFGDILYSRAFTE 107

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +S          R    +S    +   G +    L  Q      T+   +   KT +L+ 
Sbjct: 108 LSQMDK------RVAYHISNAVTLLSIGEMMDVDLT-QSFNTSYTKYLDMIYKKTASLIE 160

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +  S AI+ +  +   E+   +G+NLG+ FQ+ DD+LD  +D  
Sbjct: 161 ASARSAAILVNLDE---EKYATYGKNLGLAFQMIDDILDITQDSK 202


>gi|164690679|dbj|BAF98629.1| octaprenyl diphosphate synthase [Streptomyces argenteolus]
          Length = 357

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 14/245 (5%)

Query: 3   GGLPSKLQENSKRIDTILDD---LLLQTASHMQTQHND--------RLLSAIRYAL-LGG 50
           GG  +  +E S  ID +L +    +     HM +  ++         +   + YAL   G
Sbjct: 8   GGQRALTEEASVSIDAVLKEMHGYVANARRHMTSAFDELAESWQTSPVRDVVHYALDEPG 67

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR  +          +     RV A IE  H  SL+HDDL  +D    RR  P+V   
Sbjct: 68  KMIRPTITLAACQAVGGDPEMFGRVAAGIEYGHLASLMHDDL--IDEDATRRRIPSVWNA 125

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +   +A+IAG+ LL  AF  ++  +    + I           +        +M    + 
Sbjct: 126 FGVPSAVIAGDLLLFTAFHALACQQGVPAERIVRTFEAVTRSGVDACFGTSLEMALAGNI 185

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            I       +   KTGA++    E GA++   S  +   LR +GE+LG+ FQ+ DD+L  
Sbjct: 186 SISTETYLKMAAGKTGAVLRGCSEGGAVIGGGSPRQIASLRDYGEDLGVAFQIIDDVLPY 245

Query: 231 EEDLP 235
           E D  
Sbjct: 246 ESDEE 250


>gi|313680555|ref|YP_004058294.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977]
 gi|313153270|gb|ADR37121.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977]
          Length = 319

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 16/226 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S L E  +  +  L  LL      +Q   +D + +       GGK+IR  L    +    
Sbjct: 8   SALPEPGEAFERRLRALLRSDVEFIQLIEDDLIAA-------GGKRIRPRLALLASRALG 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 + +  A+E +H  +L+HDDL  +D+   RRG+     +Y    ++++G+ LL+ 
Sbjct: 61  GVPHE-MELALAVELLHSATLLHDDL--VDDAETRRGREAAFRKYGNAVSVLSGDYLLSR 117

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +++        ++ ++    L     L      Q      +   E Q + I + KT 
Sbjct: 118 VLFLLAETGRIELVHLFAEAARQLAEGEVL------QFQAAAYQEYSEAQYYRIIESKTA 171

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ALM  A E  A++  A +  +  L  +G   G+ FQ+ DD LD   
Sbjct: 172 ALMRAATEGAALLGRAPETLRMALVTYGREYGMAFQMRDDYLDLMG 217


>gi|257087255|ref|ZP_05581616.1| polyprenyl synthetase [Enterococcus faecalis D6]
 gi|294780336|ref|ZP_06745705.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
 gi|307270277|ref|ZP_07551585.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
 gi|256995285|gb|EEU82587.1| polyprenyl synthetase [Enterococcus faecalis D6]
 gi|294452600|gb|EFG21033.1| polyprenyl synthetase [Enterococcus faecalis PC1.1]
 gi|306513331|gb|EFM81955.1| polyprenyl synthetase [Enterococcus faecalis TX4248]
 gi|315026059|gb|EFT37991.1| polyprenyl synthetase [Enterococcus faecalis TX2137]
 gi|327535515|gb|AEA94349.1| putative trans-hexaprenyltranstransferase [Enterococcus faecalis
           OG1RF]
          Length = 326

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTA 72
           ++  L +        + T++ D   + +  A  GGK +R       A L +         
Sbjct: 11  VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L++ A++E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+
Sbjct: 71  LKIAASLEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALM 189
                      S+ M       G++ +L G   QM    D  +           KT  L 
Sbjct: 129 DAMNG------SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             +C  GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 181 SLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|315143484|gb|EFT87500.1| polyprenyl synthetase [Enterococcus faecalis TX2141]
          Length = 326

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTA 72
           ++  L +        + T++ D   + +  A  GGK +R       A L +         
Sbjct: 11  VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L++ A++E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+
Sbjct: 71  LKIAASLEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALM 189
                      S+ M       G++ +L G   QM    D  +           KT  L 
Sbjct: 129 DAMNG------SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             +C  GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 181 SLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|110668786|ref|YP_658597.1| trifunctional short-chain (E)-prenyl diphosphate synthase (
           dimethylallyltransferase / geranyltranstransferase /
           farnesytranstransferase) [Haloquadratum walsbyi DSM
           16790]
 gi|109626533|emb|CAJ52996.1| probable trifunctional short-chain (E)-prenyl diphosphate synthase
           (probable dimethylallyltransferase / probable
           geranyltranstransferase / probable
           farnesytranstransferase) [Haloquadratum walsbyi DSM
           16790]
          Length = 348

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 29/250 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +     ++ E  +   T+++D L    + +  Q  +RL  A RY L  GGK++R  +   
Sbjct: 3   SDATEERVLEAVRARRTLVNDAL---DTDVPMQSPERLYEATRYLLEAGGKRLRPTVALL 59

Query: 61  CAS----------------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            A                   + + +  +    +IE I  ++LIH     MD+  +RRG 
Sbjct: 60  TAESLADVDPLTADYRSFPALDGSEVDVMSAATSIEVIQSFTLIH--DDIMDDDDLRRGV 117

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P VH +YD  TAI+AG+ L   AFE++S+      + + +   L+ T       +  GQ 
Sbjct: 118 PAVHREYDTETAILAGDTLYAKAFELLSNTGADPANGVAAVSRLATT----CTQICEGQA 173

Query: 165 LDIQDEFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           LD++ E  D     +   + ++KT  L   A  + A++  A  +  + L  +G + G  F
Sbjct: 174 LDVEFEHRDAVLPEEYLEMVELKTAVLYGAATSTTALLLDADADVVDALYQYGIDAGRAF 233

Query: 222 QLADDLLDCE 231
           Q+ DD+LD  
Sbjct: 234 QIQDDVLDLT 243


>gi|257416435|ref|ZP_05593429.1| polyprenyl synthetase [Enterococcus faecalis AR01/DG]
 gi|257158263|gb|EEU88223.1| polyprenyl synthetase [Enterococcus faecalis ARO1/DG]
          Length = 326

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 18/230 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTA 72
           ++  L +        + T++ D   + +  A  GGK +R       A L +         
Sbjct: 11  VERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQL 70

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L++ A++E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+
Sbjct: 71  LKIAASLEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIA 128

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALM 189
                      S+ M       G++ +L G   QM    D  +           KT  L 
Sbjct: 129 DAMNG------SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELF 180

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             +C  GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 181 SLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|227505153|ref|ZP_03935202.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum
           ATCC 6940]
 gi|227198266|gb|EEI78314.1| possible trans-hexaprenyltranstransferase [Corynebacterium striatum
           ATCC 6940]
          Length = 334

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 17/229 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH 69
           + S+RI   +   + +   H   +  D +   + + +  GGK+ R  +    +       
Sbjct: 17  QLSERISAGIA-AVEELLHHEIDRGQDFVKEKVSHLSSAGGKRFRPMMALLASEFGARPG 75

Query: 70  -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               ++    +E +H  +L HDD+  MD    RRG  + + ++    AI+AG+ LL +A 
Sbjct: 76  SPEVVKAATVVEMVHVATLYHDDV--MDEAERRRGVESANFRWTNSVAILAGDVLLAHAS 133

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186
            ++S   T   ++           +   + ++ GQM +     E         + + KT 
Sbjct: 134 RLMSQLDTHTVEH----------FSETFEELVTGQMRETIGAGEANAVEHYMAVIREKTA 183

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L+  A   GA  A A+  +   LR  G  +G+IFQ+ DD++D   D  
Sbjct: 184 VLIASAGYLGAYHAGATPEQAAALRQIGGAIGMIFQIVDDIIDIFSDSK 232


>gi|298529963|ref|ZP_07017365.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509337|gb|EFI33241.1| Trans-hexaprenyltranstransferase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 322

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 15/229 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L         RI+  L+  L Q    ++      L       L GGK++R  L    A  
Sbjct: 4   LSDFFSRELPRINATLEQELAQLNPLVKEVGEHIL-------LSGGKRLRPMLTILTARC 56

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     +  ++E +H  +LIHDD+  +D+   RRG+   H+ +     ++AG+ LL
Sbjct: 57  LGYQDQDIYPLACSLEFLHSATLIHDDI--LDSADTRRGQTACHLAFGLHRTVLAGDALL 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A  I++       +   +Q ++         G +  ++  I+    D T    I + K
Sbjct: 115 ALANLIVARYDIPAMNYCVAQAIMRTAT-----GEVE-EIAQIRSPRPDRTAYLEIIQGK 168

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L+  AC  GA++A A Q   +    FG N+G+ FQL DD LD   D
Sbjct: 169 TADLIRAACSCGAMLARADQERLDHADSFGFNVGMAFQLVDDALDYAAD 217


>gi|116250711|ref|YP_766549.1| octaprenyl-diphosphate synthase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255359|emb|CAK06434.1| putative octaprenyl-diphosphate synthase [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 338

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    ASLF+      +++  ++E +H  +L+HDD+  +D   +RRGK T  
Sbjct: 57  GGKRLRPMLTLASASLFDYRGENHIKLATSVEFMHTATLLHDDV--VDESDLRRGKSTAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           + +    +++ G+ LL  AF ++    +     + +  +LS    +  +G +  Q+   +
Sbjct: 115 MIWGNQASVLVGDFLLGQAFRMMVDVGS-----LDALDVLSSAACVIAEGEVL-QLSVAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A   ++ +  L+ +G NLG+ FQL DD L
Sbjct: 169 NMETTEDDYLSVIRAKTAALFAAAAEVGPIVAEVGRSGRNALKSYGMNLGLAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGKAADLGK 239


>gi|116511014|ref|YP_808230.1| prenyl transferase [Lactococcus lactis subsp. cremoris SK11]
 gi|125623073|ref|YP_001031556.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363]
 gi|116106668|gb|ABJ71808.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|124491881|emb|CAL96802.1| prenyl transferase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300069820|gb|ADJ59220.1| prenyl transferase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 326

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 10/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--- 65
             ++   I   L D+       ++  + +  ++  ++A  GGK +R  L    A +    
Sbjct: 4   FWQDYPEIQNKLKDVQALMIERLKINNQEIEVALQKFASRGGKMVRPALFLLFAGIVPNG 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           + +    +++ A++E +H  +LIHDD+  +D+  +RRG P+V  Q+ +  A+ AG+ + T
Sbjct: 64  SKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPLRRGMPSVESQFGKDVAVYAGDFVYT 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             FE++           ++    + +    LQG L  QM    D+     +       KT
Sbjct: 122 VYFELLIETMNGTSFVAKN----AQSMKRILQGELT-QMQSAFDKNNTARRYMKAISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             L+  +C  G   A   +  +   R  G  +G+ FQ+ DD+L+  
Sbjct: 177 AELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDILNFT 222


>gi|313125957|ref|YP_004036227.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
           [Halogeometricum borinquense DSM 11551]
 gi|312292322|gb|ADQ66782.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
           [Halogeometricum borinquense DSM 11551]
          Length = 348

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 33/243 (13%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF-- 65
           ++   + ++  LD+        +     +RL  A RY L  GGK++R  +    A     
Sbjct: 14  VKARRELVNDALDE-------DVPMADPERLYEATRYLLEAGGKRLRPTVTLLTAEALAD 66

Query: 66  --------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
                         +   +  +    +IE I  ++LIH     MD+  +RRG P VH +Y
Sbjct: 67  AEPLSEDYRSFPALDGADIDVMAAAVSIEVIQSFTLIH--DDIMDDDDLRRGVPAVHKEY 124

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           D  TAI+AG+ L   AFE ++      ++ + +  +L+ T       +  GQ LD++ E 
Sbjct: 125 DTETAILAGDTLYAKAFEFMTQTGADPQNGLEAVRLLATT----CTKICEGQALDVEFER 180

Query: 172 IDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             E    +   + ++KT  L   A  +  ++  A     E L  +G + G  FQ+ DD+L
Sbjct: 181 RTEVLPDEYLEMVELKTAVLYGAAAATAGVLMGADDETVEALYRYGIDSGCAFQIQDDVL 240

Query: 229 DCE 231
           D  
Sbjct: 241 DLT 243


>gi|237716862|ref|ZP_04547343.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1]
 gi|262405631|ref|ZP_06082181.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
           sp. 2_1_22]
 gi|294644424|ref|ZP_06722187.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
 gi|294810418|ref|ZP_06769075.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
 gi|298484258|ref|ZP_07002422.1| polyprenyl synthetase [Bacteroides sp. D22]
 gi|229442845|gb|EEO48636.1| octaprenyl-diphosphate synthase [Bacteroides sp. D1]
 gi|262356506|gb|EEZ05596.1| heptaprenyl diphosphate synthase component II protein [Bacteroides
           sp. 2_1_22]
 gi|292640259|gb|EFF58514.1| polyprenyl synthetase [Bacteroides ovatus SD CC 2a]
 gi|294442383|gb|EFG11193.1| polyprenyl synthetase [Bacteroides xylanisolvens SD CC 1b]
 gi|295085933|emb|CBK67456.1| Geranylgeranyl pyrophosphate synthase [Bacteroides xylanisolvens
           XB1A]
 gi|298269583|gb|EFI11180.1| polyprenyl synthetase [Bacteroides sp. D22]
          Length = 324

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 8/182 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+     + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVARLYGAVCPSTLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  +         +L ++ R   ++S        G L  Q+ ++ +
Sbjct: 103 IFNNKVAVLTGDYLLATSL-----VHAELTNSHRIIQLVSTLGQDLADGELL-QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT AL     ++ A      + E E  R  GE +GI FQ+ DD+ D
Sbjct: 157 HSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIFD 216

Query: 230 CE 231
             
Sbjct: 217 YF 218


>gi|126736181|ref|ZP_01751924.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
 gi|126714347|gb|EBA11215.1| geranylgeranyl pyrophosphate synthetase [Roseobacter sp. CCS2]
          Length = 302

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 85/199 (42%), Positives = 126/199 (63%), Gaps = 9/199 (4%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +A+ YA  GGK +R+FL  E A +  +N + A    AAIECIH YSL+HDDLP MD+  +
Sbjct: 46  AAMLYAASGGKALRAFLALETARMLGINPVAAAGAAAAIECIHAYSLVHDDLPCMDDDDL 105

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+PTVH ++D+ TA++AG+GL   AFE++   + +     +  L++SL++  G++GM+
Sbjct: 106 RRGQPTVHQKWDQATAVLAGDGLQALAFELL--IQAECAPRAKLNLLMSLSNAAGVRGMV 163

Query: 161 GGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           GGQ  DI  E     +D  Q+  +Q  KTGAL+ ++   G  MA   + E+E L  +G N
Sbjct: 164 GGQAADIAAETAAVPLDLEQIMDLQASKTGALISWSALVGPRMA---ETEREPLSIYGAN 220

Query: 217 LGIIFQLADDLLDCEEDLP 235
           LG+ FQ+ADD+LD   D  
Sbjct: 221 LGLAFQIADDVLDATGDAA 239


>gi|57753869|dbj|BAD86799.1| geranylgeranyl diphosphate synthase [Streptomyces sp. KO-3988]
          Length = 388

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 19/237 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV--NHLTA 72
           ID  L+  L   +      H   L+  +R  L  GGK+IR  L                 
Sbjct: 52  IDERLNAFLDAKSGRDTDVHLVSLIEHLRDFLAAGGKRIRPLLCMVGWHAAGGYGETEPI 111

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------QYDEVTAIIAG 120
           +   A++E  H ++LIHDD+  MD    RRG+PT+H             ++   +AI+ G
Sbjct: 112 IGAAASLELFHAFTLIHDDV--MDASDTRRGRPTLHRTLETGANGTTAERFGTNSAILLG 169

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + ++ ++ E++ S     +  +  + +L       + G     +   Q    D  +   +
Sbjct: 170 DLVMVWSDELLYSSGLDQQQLVAVRPLLDAMRTEVMIGQYRDLLSTGQ-PTADVERSLAV 228

Query: 181 QKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + KT    +      GA +A A Q+  +    +   +G  FQL DDLL    D  K
Sbjct: 229 IRYKTAKYTVERPLHIGAALAGADQSLLDVCTAYALPIGEAFQLRDDLLGVFGDPSK 285


>gi|300932807|ref|ZP_07148063.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens
           DSM 45100]
          Length = 340

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 94/236 (39%), Gaps = 23/236 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
              L   LQ   +  + +L + L++    +  + N         A+ GGK+ R       
Sbjct: 20  TSELNEMLQARVEVAEKLLRESLMEGEPFLTDKIN-------HLAIAGGKRFRVVFTLLA 72

Query: 62  ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A   +        +    +E  H  +L HDD+  MD    RRG  + ++++    AI+AG
Sbjct: 73  ALYGDKPTSQNVYKAAVVVELTHLATLYHDDV--MDEADRRRGADSANMRWGNSIAILAG 130

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + L   A ++++        +               + ++ GQM +       E      
Sbjct: 131 DYLFAVASDMLADLGAATVSH----------FASTFRELVTGQMRETVGCAEGEDPIEHY 180

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + + KTG L+  A   GA  + A    ++ L  FG N+G +FQ+ DD++D   D
Sbjct: 181 MTVIQEKTGVLIAAAGFLGAEHSGAPAEVRDALHAFGRNMGQVFQIVDDIIDIWSD 236


>gi|299145219|ref|ZP_07038287.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
 gi|298515710|gb|EFI39591.1| polyprenyl synthetase [Bacteroides sp. 3_1_23]
          Length = 324

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 8/182 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+     + L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVARLYGAICPSTLHAAVSLELLHTASLVHDDV--VDESSERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  +         +L  + R   ++S        G L  Q+ ++ +
Sbjct: 103 IFNNKVAVLTGDYLLATSL-----VHAELTTSHRIIQLVSTLGQDLADGELL-QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E   F + + KT AL     ++ A      + E E  R  GE +GI FQ+ DD+ D
Sbjct: 157 HSFSEEVYFDVIRKKTAALFAACTKAAAFSVGVGEGEAELARLLGEYIGICFQIKDDIFD 216

Query: 230 CE 231
             
Sbjct: 217 YF 218


>gi|326563527|gb|EGE13786.1| solanesyl diphosphate synthase [Moraxella catarrhalis 12P80B1]
          Length = 348

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 48  LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A +  +     A+++ A  E +H  +L+HDD+  +D   +RRGKPT
Sbjct: 64  AGGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPT 121

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +D  TA++ G+ L+  +F ++        +++    + S       +G +  Q+  
Sbjct: 122 ANATWDNPTAVLVGDYLIARSFNLLVG-----FNHLPLLKLFSDGTCDIAEGEVL-QLQH 175

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +    E+    I   KT  L   A + GA +    +   + L  F  + G  FQ+ DD
Sbjct: 176 QHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMIDD 234

Query: 227 LLDCEEDLP 235
           +LD   D  
Sbjct: 235 VLDFSGDAA 243


>gi|126458776|ref|YP_001055054.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248497|gb|ABO07588.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 334

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 17/235 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q+    ++  L         ++     +    A+ Y +  GGK++R  L    A   +  
Sbjct: 9   QKYGAEVEKAL-------VRYLSIGLAEDFREAVLYQVKTGGKRLRPLLTLAAAEAVSGQ 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL   A +E IH YSLI+DD+  +D G +RRG PTV   + +  AI+ G        
Sbjct: 62  WRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIE 119

Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------QMLDIQDEFIDETQVFMIQ 181
           E ++ +PK  L     ++++ ++     L  +           +  +   +       + 
Sbjct: 120 EAVLDTPKPTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMV 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +KTGAL+  A + G +     +   E    FG   G+ FQ+ DD+LD   D  K
Sbjct: 180 SLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYGDPKK 234


>gi|254501471|ref|ZP_05113622.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
 gi|222437542|gb|EEE44221.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
          Length = 289

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 11/201 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLP 93
             +L  A++YA+  GG +IR  L    +      +   A     AIE +HC SL+HDDLP
Sbjct: 24  PQKLGKALKYAVFPGGARIRPRLCLAVSQACGDKDPRVANACATAIELLHCASLVHDDLP 83

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             DN   RRGKP+VH +Y E  A++ G+GL+  AFE ++       +   ++L+ ++ + 
Sbjct: 84  CFDNAATRRGKPSVHKEYGEEIALLVGDGLIVTAFETLARETLHAPEQT-ARLVATIANA 142

Query: 154 IGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           +G   G++ GQ  + +++      +    + KT +L   A  +GA+ ++ +  +      
Sbjct: 143 VGSPYGIVAGQAWESEEKI----NITAYHRAKTASLFTGAVSAGALSSYGNPLD---WYA 195

Query: 213 FGENLGIIFQLADDLLDCEED 233
             + LG  +Q+ADDL D  +D
Sbjct: 196 LADALGAAYQVADDLYDAMDD 216


>gi|327311326|ref|YP_004338223.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947805|gb|AEA12911.1| polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
          Length = 347

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 17/235 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           ++   RI+  L   LL+ A+       D    A+ Y +  GGK++R  L    A   + N
Sbjct: 22  EKYGPRIEEALAKYLLRDAA-------DDFKDAVLYQISTGGKRLRPILTLAVAEAVSGN 74

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +  AL   A +E IH YSLI+DD+  +D G +RR KPT    + +  AI+ G        
Sbjct: 75  YERALPAAAIVELIHNYSLIYDDI--IDRGEVRRNKPTTRAAFGDYAAILIGIWYREAIE 132

Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEFIDETQVFMIQ 181
           E ++ +PK        ++++ ++     L  +      D       +   +       + 
Sbjct: 133 EAVLDTPKPSEFAREVAKVIKAIDEGERLDILFELAGRDDPYFVKARWPSVKLDDYIRMV 192

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +KTGAL+  A + GA+     +   +    FG N GI FQ+ DD+LD   D  K
Sbjct: 193 GLKTGALIAAAAKWGAMSVADDRQLADAAWDFGMNAGIAFQIVDDVLDIFGDPKK 247


>gi|115469526|ref|NP_001058362.1| Os06g0678200 [Oryza sativa Japonica Group]
 gi|52076633|dbj|BAD45534.1| putative geranyl diphosphate synthase [Oryza sativa Japonica Group]
 gi|52076919|dbj|BAD45931.1| putative geranyl diphosphat synthase [Oryza sativa Japonica Group]
 gi|113596402|dbj|BAF20276.1| Os06g0678200 [Oryza sativa Japonica Group]
 gi|125556476|gb|EAZ02082.1| hypothetical protein OsI_24162 [Oryza sativa Indica Group]
 gi|215765303|dbj|BAG87000.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 430

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 30/248 (12%)

Query: 7   SKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTEC 61
           S+ +E     + + D+L  L      M      +L SA  Y       GK+ R  ++   
Sbjct: 84  SRSEEQQDPFELVADELSLLANRLRSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLM 143

Query: 62  ASLFNVN-----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           AS                            +    E IH  SL+HDD+  +D+   RRG 
Sbjct: 144 ASALKFPLSDSTEVGVLTILANKLRTRQQNIAEITEMIHVASLLHDDV--LDDADTRRGV 201

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            +++       +++AG+ LL+ A   +++        + S +  ++ H +  + M   Q+
Sbjct: 202 SSLNCIMGNKLSVLAGDFLLSRACVALAALGNT---EVVSLMATAVEHLVTGETM---QI 255

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              +++             KT +L+  +C++ AI+A  + +       +G NLG+ FQL 
Sbjct: 256 STSREQRRSMDYYLQKTYYKTASLISNSCKAVAILAGHTADVSMLAYEYGRNLGLAFQLI 315

Query: 225 DDLLDCEE 232
           DD+LD   
Sbjct: 316 DDVLDFTG 323


>gi|292493567|ref|YP_003529006.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
 gi|291582162|gb|ADE16619.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
          Length = 329

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 93/229 (40%), Gaps = 11/229 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN    +  +E   R+D  L   +    S +       +   IR     GK++R  LV  
Sbjct: 1   MN--FLNYWRETRSRLDQELRCQIPMLFSALPPPQIKTIQQIIRD----GKRVRGCLVCL 54

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             +        AL    AIECI   SLIHDD   +D   IRR +P          A++ G
Sbjct: 55  INNALGGKTEDALPRAIAIECIQAASLIHDD--YVDEDIIRRKRPATWTVEGPRRAVLLG 112

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + +   A + +     +    + ++ + ++ +  G    L  QM   +   ++      I
Sbjct: 113 DVIFATAIQSMVELGNEDGATV-ARAIATVAN--GAYQELSWQMDGGEANLLEAGIYDRI 169

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +KTGAL   AC+ GAI   A Q        FG   G  +Q+ADDL D
Sbjct: 170 IYLKTGALFGAACQLGAIATGAPQETSASAYAFGTRTGEAYQIADDLQD 218


>gi|227549792|ref|ZP_03979841.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227078047|gb|EEI16010.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 338

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 22/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L +++ E  ++ + +L          + T  +  +      AL GGK+ R  +   C
Sbjct: 19  DAELTARVAEGLEKSEKLL-------MERLSTGEDFIVDKVTHLALAGGKRFRPLVALLC 71

Query: 62  ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +          A++     E +H  +L HDD+  MD   +RRG  + + +++   AI+AG
Sbjct: 72  SEFGPHPGSDNAVKGAVITELVHLATLYHDDV--MDEADMRRGVESANARWNNTVAILAG 129

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVF 178
           + L ++A  ++S   T        + +       G   ++ GQM +       +      
Sbjct: 130 DILFSHASLMMSEIDT--------ETVRHFADTFG--QLVTGQMRESVGARGGDPVQHYL 179

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + + KT  L+  A   G++ A AS +   R    GE +G+IFQ+ DD++D   D  +
Sbjct: 180 TVIREKTAVLIASAAHLGSLHAGASADVVTRCETIGEAIGMIFQIVDDIIDIFSDSEQ 237


>gi|57242131|ref|ZP_00370071.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis
           RM3195]
 gi|57017323|gb|EAL54104.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter upsaliensis
           RM3195]
          Length = 297

 Score =  158 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + ID I+ + LL+ A           +  +      GKK+RS L+   A         A 
Sbjct: 2   QEIDKIIQNYLLELAYEP--------ILTMLSKTNTGKKLRSKLLLSIA----GESQKAY 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A IE IH  SL+HDD+  +D   +RRG  +++ ++    A++ G+ L + AF  +S 
Sbjct: 50  VLCAIIELIHLASLLHDDI--IDESELRRGARSINAEFGAKNALMLGDILYSKAFYELS- 106

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                K   +   +LS        G L    L  +    D+     +   KT  L+  + 
Sbjct: 107 -----KQEAKISQILSNAVCKLAIGELMDVNLSKKF-NPDKEAYLTMIYHKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GA++A  ++N       +G+NLG+ FQ+ DD+LD   D  
Sbjct: 161 RCGALLAKLNEN---AFAEYGKNLGLAFQIVDDILDITGDEA 199


>gi|239631997|ref|ZP_04675028.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066682|ref|YP_003788705.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
 gi|239526462|gb|EEQ65463.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439089|gb|ADK18855.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
          Length = 283

 Score =  158 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 120/234 (51%), Gaps = 17/234 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L      ++  LD+ L   A       N  L +A+ Y++  GGK++R  L+    ++++ 
Sbjct: 5   LAGWRTAVEQTLDEQLAAVA-------NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDG 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL   AA+E +H YSLIHDDLP+MD+  +RRGKPT H Q+ E  AI+AG+ LLT A
Sbjct: 58  VIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
           F I+S    +      +  +  L    G  GM+GGQ   +D ++E      +  + + KT
Sbjct: 118 FAILSRQYPEKG----AACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GAL+  A   G ++    + ++  L  F    G+ FQ+ DD+ D      +L K
Sbjct: 174 GALIQAAIAMGGLLVTIPETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGK 227


>gi|84514696|ref|ZP_01002060.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
           SKA53]
 gi|84511747|gb|EAQ08200.1| geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
           SKA53]
          Length = 294

 Score =  158 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 95/235 (40%), Positives = 128/235 (54%), Gaps = 17/235 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           LP  L + ++    +++  L   +  +          A+ YA  GGK +R+FL  E A L
Sbjct: 10  LPDALAQAARIATQMIEAQLSDLSGPVP--------DAMIYAARGGKALRAFLAIETARL 61

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V    A    AAIECIH YSLIHDDLP MD+  +RRG+PTVH ++DE TA++AG+ L 
Sbjct: 62  HGVPPQVAAHAAAAIECIHAYSLIHDDLPCMDDDDLRRGQPTVHKRWDEATAVLAGDALQ 121

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQVFMI 180
             AFE++        D  +  L LSL    G++GM+GGQ  DI  E  D      Q+  +
Sbjct: 122 ALAFELLGRL--DCADAAKLDLTLSLAQAAGVRGMVGGQAADIAAETADVPLTLDQIIAL 179

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           Q  KTGALM +A   G  MA A Q     LR +G+ LG+ FQ+ADD+LD   D  
Sbjct: 180 QAGKTGALMSWAALVGPRMALADQ---AALRLYGDCLGLAFQIADDVLDVTGDAA 231


>gi|311895176|dbj|BAJ27584.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 357

 Score =  158 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 5/187 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     N    +  G ++E +H +SL+HDDL  MD    RR + T  
Sbjct: 63  GGKAVRPALALLSAEAVGANAQVGVPGGVSVELVHNFSLLHDDL--MDGDETRRHRATAW 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++AG+ L T   E++         +               + ++ GQ LD+ 
Sbjct: 121 TVFGPAQAVLAGDALATLGTEVLLDAAVTGGADPVDAARAVRLITTATRRLIDGQALDVS 180

Query: 169 DEFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D   V     ++  KTGAL+  +   GA++A A     + L+ +G +LG+ FQ  D
Sbjct: 181 FEQRDAVTVEECLAMEGGKTGALLAASAAIGAVLAGADDRVSDALQRYGYHLGLAFQAVD 240

Query: 226 DLLDCEE 232
           DLL    
Sbjct: 241 DLLGIWG 247


>gi|225631093|ref|ZP_03787822.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591208|gb|EEH12361.1| octaprenyl-diphosphate synthase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 264

 Score =  158 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 8/172 (4%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + N +    + V A++E IH  +L+HDD+  +D    R G  T +  +   ++I+ G+ L
Sbjct: 1   MLNYSGENRINVAASVEFIHNATLLHDDV--LDESEARHGVKTANKIWGNKSSILVGDLL 58

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           LT AF  +         N+    +LS   ++ ++G +  QM    D        F I   
Sbjct: 59  LTLAFRWLIECG-----NLNILSILSKASHLLVKGEIK-QMKARFDPHTVRENYFDIIGE 112

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           KT +L    CE+ + ++ A+ +E ERL+ FG N G+ FQ+ DD+LD   +  
Sbjct: 113 KTASLFSACCEAASTVSGATNDETERLKNFGFNFGMAFQIVDDMLDYTANQG 164


>gi|296113380|ref|YP_003627318.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4]
 gi|295921074|gb|ADG61425.1| solanesyl diphosphate synthase [Moraxella catarrhalis RH4]
 gi|326559225|gb|EGE09656.1| solanesyl diphosphate synthase [Moraxella catarrhalis 46P47B1]
 gi|326559864|gb|EGE10264.1| solanesyl diphosphate synthase [Moraxella catarrhalis 7169]
 gi|326569650|gb|EGE19702.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC1]
 gi|326570131|gb|EGE20176.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC8]
 gi|326570869|gb|EGE20893.1| solanesyl diphosphate synthase [Moraxella catarrhalis BC7]
 gi|326575988|gb|EGE25911.1| solanesyl diphosphate synthase [Moraxella catarrhalis CO72]
 gi|326576400|gb|EGE26309.1| solanesyl diphosphate synthase [Moraxella catarrhalis O35E]
          Length = 348

 Score =  158 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 48  LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A +  +     A+++ A  E +H  +L+HDD+  +D   +RRGKPT
Sbjct: 64  AGGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPT 121

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +D  TA++ G+ L+  +F ++        +++    + S       +G +  Q+  
Sbjct: 122 ANATWDNPTAVLVGDYLIARSFNLLVG-----FNHLPLLKLFSDGTCDIAEGEVL-QLQH 175

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +    E+    I   KT  L   A + GA +    +   + L  F  + G  FQ+ DD
Sbjct: 176 QHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMIDD 234

Query: 227 LLDCEEDLP 235
           +LD   D  
Sbjct: 235 VLDFSGDAA 243


>gi|284050730|ref|ZP_06380940.1| trans-hexaprenyltranstransferase [Arthrospira platensis str.
           Paraca]
          Length = 211

 Score =  158 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 13/210 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  LL      +    +  L +A  +   + GK++R  +V   +     +H     
Sbjct: 11  VEADLK-LLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEIIPK 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  ++   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++        + SQ+++ L            Q L+  D  +           KT +L+  
Sbjct: 128 ANLDNLEVVKLLSQVIMDLAEGEI------QQGLNRFDTSLSIEAYLEKSYYKTASLIAN 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIF 221
           + ++  +++  S    E L  +G N+G+ F
Sbjct: 182 SSKAAGLLSGVSAELAEDLYKYGRNIGLAF 211


>gi|159046054|ref|YP_001534848.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL
           12]
 gi|157913814|gb|ABV95247.1| geranylgeranyl pyrophosphate synthetase [Dinoroseobacter shibae DFL
           12]
          Length = 292

 Score =  158 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 74/229 (32%), Positives = 106/229 (46%), Gaps = 15/229 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
             RI+T LD  L+++ +        +L SA+ YA+  GG +IR  +    A     +   
Sbjct: 4   QTRIETALDIALIRSRA---GSCPPKLASALEYAVKPGGARIRPTICLNVARACGDDAPG 60

Query: 72  ALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                 A IE IHC SL+HDDLP+ DN  +RRGKPTVH  + E  A++ G+ L+  AFE 
Sbjct: 61  LTDAACAAIELIHCGSLVHDDLPAFDNADVRRGKPTVHKAWSEPLAVLTGDTLIIMAFEQ 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I+           +  +    ++    G+  GQ  + +     +  +    + KTGAL  
Sbjct: 121 IALAARSDALRAATLTLELARYSGMPHGICAGQAWESEA----QVDLSAYHRAKTGALFT 176

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            A   GA  A A     E     G  +G  FQ+ADDL D    EE L K
Sbjct: 177 AATRMGAAAAGADP---EAWTELGARIGEAFQVADDLRDALYDEETLGK 222


>gi|325003710|ref|ZP_08124822.1| trans-hexaprenyltranstransferase [Pseudonocardia sp. P1]
          Length = 330

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 26/242 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L     +  KR++ +L    + +     T+ +  L+ A      GGK+ R       
Sbjct: 8   DPALAEATADGLKRVEDLLHR-EVHSDYEFVTETSLHLIEA------GGKRFRPLFTLLA 60

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +  +      +   A +E IH  +L HDD+  MD   +RRG  + + ++D   AI+ G
Sbjct: 61  AQVGPHPERDGVITAAAVVELIHLATLYHDDV--MDEAAMRRGAESANSRWDNSIAILTG 118

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + L  +A  +++         I                ++ GQM + +     +      
Sbjct: 119 DFLFAHASRLVADLGPDAVRII----------AETFAQLVTGQMRETRGPKPSDDPVEHY 168

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DL 234
             +   KTG+L+  +   G + + A     E L  FG+ +G  FQ++DD++D      D 
Sbjct: 169 LRVVGEKTGSLIATSGRYGGMFSGAPTEHIEALHRFGDVIGTAFQISDDIIDIASPADDS 228

Query: 235 PK 236
            K
Sbjct: 229 GK 230


>gi|315640276|ref|ZP_07895393.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952]
 gi|315483938|gb|EFU74417.1| heptaprenyl diphosphate synthase [Enterococcus italicus DSM 15952]
          Length = 326

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 10/215 (4%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVGAAIEC 81
           +L++ A H++ +  ++ +  + +A  GGK +R       +S     +   A  + AAIE 
Sbjct: 22  VLMEDAIHLKNKPVEQAVLQMIHA--GGKMLRPAYQLLFSSFGPEKDRKKATAIAAAIEM 79

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  +LIHDD+  +D   +RRG  ++  Q+    A+ AG+ L    F+++++  +     
Sbjct: 80  LHTATLIHDDI--VDEAELRRGLSSIRSQFGNSVAVYAGDYLFVSCFKLMANYASS---- 133

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           ++S  M S +    L G L GQM +  +  +           KT  L   +C  GA  + 
Sbjct: 134 MKSLQMHSKSMESILNGEL-GQMDNRFNIDLSVADYLEAISGKTAELFALSCAIGAYESG 192

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            S+   E+    G  +G+ FQ+ DD+LD  +D  K
Sbjct: 193 TSRKFAEQAGKIGLAIGMAFQIMDDILDYTQDQQK 227


>gi|326329624|ref|ZP_08195946.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Nocardioidaceae bacterium Broad-1]
 gi|325952620|gb|EGD44638.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Nocardioidaceae bacterium Broad-1]
          Length = 337

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 17/237 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L  +L+     ++  L     +++S   T+    LL A      GGK+ R  LV   
Sbjct: 19  DPELEQRLRARLAIVEEKLAGY-ARSSSPFVTEAASHLLEA------GGKRFRPLLVLLA 71

Query: 62  ASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A           +     +E  H  SL HDD+  MD   +RRG+ T + ++D   AI+ G
Sbjct: 72  AECGPDTLADEVITAACIVELTHQASLYHDDV--MDEALLRRGEDTANARFDNHVAILTG 129

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   +  + +         I++     L     L+G+   + +D  D  ++      +
Sbjct: 130 DFLFARSSSLTAELGPDAV-RIQAATFAKLVEGQILEGVAPAEGVDPVDHHLE------V 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
              KTG L+  +   GA+ A A +  ++ L  +G+ +G+ FQL+DD+LD   D   K
Sbjct: 183 LAGKTGVLIATSALYGALFAGADKEIQDALVAYGDIVGVAFQLSDDILDIASDESGK 239


>gi|308233677|ref|ZP_07664414.1| Polyprenyl synthetase [Atopobium vaginae DSM 15829]
 gi|328943611|ref|ZP_08241076.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829]
 gi|327491580|gb|EGF23354.1| putative geranyltranstransferase [Atopobium vaginae DSM 15829]
          Length = 366

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 96/253 (37%), Gaps = 26/253 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECA 62
             + LQE    I   L   L +   S  QT     L   +  + + GGK IR  L    A
Sbjct: 16  FTTFLQETLPYIVHALTQSLQEPLDSQAQTDLQAYLYQPLAHFTVNGGKLIRPALCVLGA 75

Query: 63  SLFNVNH-------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                                T L++  A E     +LIHDD+   D   +RRGKP ++ 
Sbjct: 76  YACGYEGMLKDNCSIQKSVSDTLLQISCAFEHFQAAALIHDDIA--DESLLRRGKPCLYR 133

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--- 166
            +    A   G+  L +A E I+S  + + D +R +L+         +  + GQ LD   
Sbjct: 134 VHGTGLATNMGDSALVHALECINSL-SGISDELRVRLIQEFITME--KHTIEGQALDVGW 190

Query: 167 --IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                  I       +   KT           GA+ A ASQ   E LR +G   G+ FQL
Sbjct: 191 SNENRWDISLDDYLYMATSKTAYYSASTPLVIGALFAGASQKRSEALRAYGLQAGLAFQL 250

Query: 224 ADDLLDCEEDLPK 236
            DD L+   D  K
Sbjct: 251 KDDELNLFGDANK 263


>gi|260574939|ref|ZP_05842941.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
 gi|259022944|gb|EEW26238.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
          Length = 295

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 12/219 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           +R++  +          +      RL  A+ YA+  GG +IR  ++   A     +    
Sbjct: 5   ERVEAAIA---AAVGFGLGPDAPPRLAQALPYAVTPGGARIRPTILLSVAIACGDDRPGL 61

Query: 73  L-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
                AA+E IHC SL+HDDLPS D+  IRRGKPT+H  ++E  A++ G+ L+  AF+++
Sbjct: 62  SNAAAAALELIHCASLVHDDLPSFDDADIRRGKPTIHKAFNEPLAVLTGDSLIILAFDVL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +             +      +    G+  GQ  + +        +    + KTGAL   
Sbjct: 122 ARAAEDAPGRGLGLIRTLAKRSGMPDGICAGQGWESEPT----VNLSAYHRSKTGALFIA 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A   GA  A     E E     G  +G  FQ+ADDL D 
Sbjct: 178 ATCMGAQAAG---QEPEPWVELGSRIGEAFQVADDLRDA 213


>gi|227888787|ref|ZP_04006592.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii
           ATCC 33200]
 gi|227850624|gb|EEJ60710.1| possible trans-hexaprenyltranstransferase [Lactobacillus johnsonii
           ATCC 33200]
          Length = 350

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 19/219 (8%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---NVNHLTALRV 75
            ++ ++L+  + +     D L          GK +R   V    S     N       ++
Sbjct: 39  AINRIILKHVNTVPGLLGDALKDTFA---SPGKMLRPACVMLFGSFGPNANQKREELQKI 95

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S   
Sbjct: 96  ATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSENA 153

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             L   I             +Q +L G+     + +   I E +     K KTG L   A
Sbjct: 154 QSLHSVI--------ADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFGLA 205

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           C  GA  +        + + FGE LG  FQL DD+LD  
Sbjct: 206 CFIGAYESGLKVTRALKAKKFGEYLGQAFQLRDDILDYT 244


>gi|86740094|ref|YP_480494.1| polyprenyl synthetase [Frankia sp. CcI3]
 gi|86566956|gb|ABD10765.1| Polyprenyl synthetase [Frankia sp. CcI3]
          Length = 634

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 26/247 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRL---LSAIRYALLGGKKIRSFLVTECAS-LFN 66
           +  +R+  +L        + ++   +D +     A  + L  GK++R             
Sbjct: 250 DVRRRVSAVLRRFAGSRGALLRGIDDDLIPFVRIATEFLLAEGKRLRPAFCYWGWRGAGG 309

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY--------------- 111
            +    +   AAIE +H  +LIHDD+  MD    RRG+P  H ++               
Sbjct: 310 PDCDEIVTAAAAIELLHACALIHDDV--MDASDTRRGRPAAHRRFSRVHRTAGWRGDPAD 367

Query: 112 -DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM---LGGQMLDI 167
                AI+ G+  L +A E++++ +   +  +R+        +  + G    L GQ    
Sbjct: 368 FGRSAAILLGDLFLAWADELLAASRMPPEALVRAWPTYGRMRSELMAGQYLDLVGQAEAG 427

Query: 168 QDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
               +D  +   I + KT    +    + G ++A A  +       FG  LG  FQL DD
Sbjct: 428 PHGGLDPGRAVRIARYKTAGYTVVRPLQLGGLLAGAPPDLLAAYAAFGLPLGEAFQLRDD 487

Query: 227 LLDCEED 233
           LL    D
Sbjct: 488 LLGVFGD 494


>gi|317152516|ref|YP_004120564.1| polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942767|gb|ADU61818.1| Polyprenyl synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 322

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 19/239 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN  L    Q     I+  LD    +  + +       ++ +      GGK+IR  L   
Sbjct: 1   MNE-LLRYFQRELPGINQFLD-AEAEALNGLVRDVAKHIIGS------GGKRIRPMLTLL 52

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A     +      +  ++E +H  +L+HDD   +D+  +RRG+   H+ +     I+AG
Sbjct: 53  FARAMGYDRDDYHAIACSLELLHSATLLHDD--YLDDAELRRGRSAAHLVFGRTETILAG 110

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL  A E+ +        N R   +L+        G +  ++   +   +D      I
Sbjct: 111 DALLALANEMGARYG-----NARLCWLLARGIMETAVGEIE-EIRFSKHPTLDREAYMNI 164

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              KT  L+  AC  GA +A A+  +++    +G NLGI FQL DD LD      +  K
Sbjct: 165 IIGKTARLIECACRCGAALAGATPEQEDAAGEYGLNLGIAFQLVDDALDYASPTSETGK 223


>gi|83816814|ref|YP_445986.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
 gi|83758208|gb|ABC46321.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
          Length = 342

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 15/220 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            E    +   +D+ L      +  +    L  A+ + L  GGK++R  L+   A  +  +
Sbjct: 21  DERVAALRARIDEALPAV---VDGRSPASLYDAVEHVLRAGGKRVRPVLLLLVAQSYGTS 77

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL    A+E  H ++L+HDDL  MD    RRG  TVH +++  TAI+AG+ ++  ++
Sbjct: 78  VDRALPAALAVEVFHNFTLVHDDL--MDEDDERRGGATVHAKWNPGTAILAGDLMMGLSY 135

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKT 185
           +++   +    + + +       ++  ++ +  GQ LD     D+ +       +   KT
Sbjct: 136 DLLGQVEGTDAEALYA------VYHPMVERLCAGQALDASFETDDAVTVEAYLDMIDRKT 189

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           GAL+  A E G+++  A   E++RL   G  +G  FQ+ D
Sbjct: 190 GALLSAAFELGSVIGGAPSPERDRLGTAGRLVGRAFQIQD 229


>gi|300779871|ref|ZP_07089727.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           genitalium ATCC 33030]
 gi|300533981|gb|EFK55040.1| possible trans-hexaprenyltranstransferase [Corynebacterium
           genitalium ATCC 33030]
          Length = 386

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 15/227 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-VN 68
           QE ++R+   LD +       + + H+         A  GGK+ R  +    +   +   
Sbjct: 68  QELAERVAAGLDGVEKLMFERLSSGHDFLNEKVTHLAKAGGKRFRPMMAMLASEFGDQPQ 127

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               ++    +E +H  +L HDD+  MD    RRG  + + ++    AI++G+ LL  A 
Sbjct: 128 AENVVKGATIVEMVHLATLYHDDV--MDEAAKRRGVDSANARWTNTVAILSGDFLLAEAS 185

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186
            I+S   T    +                 ++ GQM +     E         + + KTG
Sbjct: 186 RIMSEIDTATVAH----------FADTFSDLVTGQMRETVGPGEGDPVEHYLNVIREKTG 235

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            L+  A   GA  + A   +   L+  GE +G+IFQ+ DD++D   D
Sbjct: 236 VLIASAAFLGATHSGAKDEDVRTLKELGEAVGMIFQIVDDVIDIFSD 282


>gi|326560787|gb|EGE11154.1| solanesyl diphosphate synthase [Moraxella catarrhalis 103P14B1]
 gi|326574419|gb|EGE24361.1| solanesyl diphosphate synthase [Moraxella catarrhalis 101P30B1]
          Length = 331

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 48  LGGKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  +    A +  +     A+++ A  E +H  +L+HDD+  +D   +RRGKPT
Sbjct: 47  AGGKRMRPLITLLTARMLHDEQSQQAMQLAAITEMLHTATLVHDDV--IDASGLRRGKPT 104

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            +  +D  TA++ G+ L+  +F ++        +++    + S       +G +  Q+  
Sbjct: 105 ANATWDNPTAVLVGDYLIARSFNLLVG-----FNHLPLLKLFSDGTCDIAEGEVL-QLQH 158

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
             +    E+    I   KT  L   A + GA +    +   + L  F  + G  FQ+ DD
Sbjct: 159 QHNPKTLESDYLQIIDGKTSRLFMMATK-GAALLQGREEFLDDLGAFAYHFGNAFQMIDD 217

Query: 227 LLDCEEDLP 235
           +LD   D  
Sbjct: 218 VLDFSGDAA 226


>gi|294507897|ref|YP_003571955.1| polyprenyl synthetase [Salinibacter ruber M8]
 gi|294344225|emb|CBH25003.1| polyprenyl synthetase [Salinibacter ruber M8]
          Length = 343

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 15/220 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            E    +   +D+ L      +  +    L  A+ + L  GGK++R  L+   A  +  +
Sbjct: 22  DERVAALRARIDEALPAV---VDGRSPASLYDAVEHVLRAGGKRVRPVLLLLVAQSYGTS 78

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL    A+E  H ++L+HDDL  MD    RRG  TVH +++  TAI+AG+ ++  ++
Sbjct: 79  VDRALPAALAVEVFHNFTLVHDDL--MDEDDERRGGATVHAKWNPGTAILAGDLMMGLSY 136

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKT 185
           +++   +    + + +       ++  ++ +  GQ LD     D+ +       +   KT
Sbjct: 137 DLLGQVEGTDAEALYA------VYHPMVERLCAGQALDASFETDDAVTVEAYLDMIDRKT 190

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           GAL+  A E G+++  A   E++RL   G  +G  FQ+ D
Sbjct: 191 GALLSAAFELGSVIGGAPSPERDRLGTAGRLVGRAFQIQD 230


>gi|28198534|ref|NP_778848.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1]
 gi|71274823|ref|ZP_00651111.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon]
 gi|71902480|ref|ZP_00684417.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
 gi|170729932|ref|YP_001775365.1| trans-hexaprenyltranstransferase [Xylella fastidiosa M12]
 gi|182681213|ref|YP_001829373.1| polyprenyl synthetase [Xylella fastidiosa M23]
 gi|28056618|gb|AAO28497.1| octaprenyl-diphosphate synthase [Xylella fastidiosa Temecula1]
 gi|71164555|gb|EAO14269.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Dixon]
 gi|71727796|gb|EAO30052.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
 gi|167964725|gb|ACA11735.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa M12]
 gi|182631323|gb|ACB92099.1| Polyprenyl synthetase [Xylella fastidiosa M23]
          Length = 333

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + S    +   IDT++ D L      +    +  + S       GGK++R  L       
Sbjct: 17  IQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICS-------GGKRLRPMLTMLAGHA 69

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    ++ A IE IH  +L+HDD+  +D   +RR + T +  +    +++ G+ L 
Sbjct: 70  IGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTANALWGNAPSVLVGDFLY 127

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + +F++++        N+    +L+ T N   +G +  Q+L + +   DET    + + K
Sbjct: 128 SRSFQLMTEL-----ANLEVMQILAETTNRISEGEVL-QLLHVHNPDTDETTYLSVIERK 181

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+ +HA    + R+  +G  LG  FQ+ DD+LD   
Sbjct: 182 TAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTA 229


>gi|62898389|dbj|BAD97134.1| trans-prenyltransferase variant [Homo sapiens]
          Length = 415

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 120 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 179

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 180 DDV--IDDVSSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 237

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L     L      Q+   ++E             KT +L+  +C++ +++        E 
Sbjct: 238 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 291

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
              +G+++GI FQL DD+LD   
Sbjct: 292 AYQYGKDVGIAFQLIDDVLDFTS 314


>gi|307175359|gb|EFN65378.1| Decaprenyl-diphosphate synthase subunit 1 [Camponotus floridanus]
          Length = 337

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 16/240 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLG-GKKIRSFLV 58
           M G LP    +  +  +  L D+       + T      L  I  Y L G GK IR  L 
Sbjct: 5   MPGSLPDYQIDPYRLAEDDLKDMFDDIRLELITNTTQEELQPISTYYLDGQGKAIRPILT 64

Query: 59  TECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
              A   N +        +  ++    E IH  SL+HDD+  +D   IRRGKP+V++ + 
Sbjct: 65  ILMARAINYHKGRNVLSHSQRQIAMISEMIHSSSLLHDDV--IDQSDIRRGKPSVNVVWS 122

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           +    +AG+ +L  A  ++S  +        SQ++  L     +      Q+   + E  
Sbjct: 123 QKKVAMAGDYILAVACRMLSRLQNDEVTITISQIVTDLVQGEFM------QLGSKETENE 176

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                      KT +L+    ++ AI+A    +  E    +G N+G+ FQL DDLLD   
Sbjct: 177 RFAHYLTKTYRKTASLIANCSKAVAILAEVDDHMIEMAFQYGRNVGLAFQLVDDLLDFVA 236


>gi|294676241|ref|YP_003576856.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003]
 gi|117510|sp|P17060|CRTE_RHOCA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; AltName: Full=Farnesyltranstransferase
 gi|46003|emb|CAA36538.1| unnamed protein product [Rhodobacter capsulatus SB 1003]
 gi|46128|emb|CAA77545.1| 289 aa (30 kD) phytoene synthase [Rhodobacter capsulatus]
 gi|294475061|gb|ADE84449.1| farnesyltranstransferase [Rhodobacter capsulatus SB 1003]
 gi|227044|prf||1613414G crtE gene
          Length = 289

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 12/219 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           KRI++ L   L   A     +    L +A+ Y +  GG +IR  ++   A     +    
Sbjct: 5   KRIESALVKALSPEAL---GESPPLLAAALPYGVFPGGARIRPTILVSVALACGDDCPAV 61

Query: 73  LRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
               A A+E +HC SL+HDDLP+ DN  IRRGKP++H  Y+E  A++AG+ LL   FE++
Sbjct: 62  TDAAAVALELMHCASLVHDDLPAFDNADIRRGKPSLHKAYNEPLAVLAGDSLLIRGFEVL 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +       D     +      +    G+  GQ      E   +  +    + KTGAL   
Sbjct: 122 ADVGAVNPDRALKLISKLGQLSGARGGICAGQAW----ESESKVDLAAYHQAKTGALFIA 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A + GAI A     E E     G  +G  FQ+ADDL D 
Sbjct: 178 ATQMGAIAAGY---EAEPWFDLGMRIGSAFQIADDLKDA 213


>gi|323358802|ref|YP_004225198.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
 gi|323275173|dbj|BAJ75318.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
          Length = 353

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 16/229 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S ++    R+++ L++  +++A  +       L  A      GGK++R  L    A L
Sbjct: 31  LLSTVEAGLGRVESTLEE-EVRSADRLADVTARYLYEA------GGKRVRPMLAILTAQL 83

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + V  A+E  H  SL HDD+  MD    RRG P+    +    AI+ G+ L 
Sbjct: 84  GRGTTPEVIEVATALELTHLGSLYHDDV--MDGADKRRGVPSAQTVWGNNIAILTGDLLF 141

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + A ++++      +     QL       + L  M         DE +       +   K
Sbjct: 142 SRASQLMAR-----RGERAIQLQADTFERLVLGQMHETVGPQEGDEPV--EFYLRVLADK 194

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           TG+L+  A + G I + A +  ++ +  FGE  G+ FQL DD++D   D
Sbjct: 195 TGSLIAAAAQCGVIYSGAPEEFEQPMVVFGEKAGVAFQLLDDVIDLSPD 243


>gi|292654483|ref|YP_003534380.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2]
 gi|291370065|gb|ADE02292.1| farnesyl-pyrrophosphate synthase [Haloferax volcanii DS2]
          Length = 280

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH 69
           E  +R  T+++D L +  S ++      L   + + AL GGK++R  +            
Sbjct: 2   EYLERRVTMVNDRLEEVVSAVE---PSELADQLDHVALAGGKRVRPAVTILACEAVGGTP 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A+     +E +H  SL+ DD+  +D   IRRG P+   +Y    AIIA +GLL  AF 
Sbjct: 59  EDAVDFAVGVELVHNASLVVDDI--IDRSDIRRGTPSAWAEYGYGPAIIASDGLLGEAFA 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++SS               +      +  +  G+  ++     +E +   +   KTGAL 
Sbjct: 117 LLSSSDR-----------ATRIVAESMVELGEGEATELVAVPSNEAEYMQLAHRKTGALF 165

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             A E GA+ A    +  E    +   +G+ FQ+ DD+LD   D  
Sbjct: 166 RAAAELGAVAASGDAHVVEAFGDYAARVGVAFQIRDDVLDATADAE 211


>gi|300173625|ref|YP_003772791.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888004|emb|CBL91972.1| geranyltranstransferase [Leuconostoc gasicomitatum LMG 18811]
          Length = 309

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 31/244 (12%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L +   E   +I+  L   L   +       +      + YA+L GGK++R  L     +
Sbjct: 4   LTAFQSEWLPKIEQQLKQDLGVASR------DSDFSEMMSYAVLNGGKRLRPMLTLAVVA 57

Query: 64  LFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F      + L+V  A+E +H YSL+HDDLP+MDN   RRGKP+VH +Y E  AI+ G+ 
Sbjct: 58  SFGQKITPSILKVATAVEWVHAYSLVHDDLPAMDNDLFRRGKPSVHARYGEAEAILVGDA 117

Query: 123 LLTYAFEIISSPKTQLK--DNIRSQLML----SLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           LLT AF ++SS  +     +NI ++ +L     L+++ G  GM+ GQ+ D+++   +   
Sbjct: 118 LLTGAFHVVSSANSTDTENENIAAKELLLLSQMLSYHAGAFGMVIGQVEDMKNHRQEAKI 177

Query: 177 -----VFMIQKMKTGALMCFACESGAIMAH------ASQNEKE------RLRCFGENLGI 219
                +  +   KT AL+ F+  +G+ ++H      A  +E         L  FG + G+
Sbjct: 178 DVNWLLNDVYAPKTAALLGFSAIAGSRLSHVNSNSVADNSEIAISTTNSALLTFGTDFGM 237

Query: 220 IFQL 223
            FQ+
Sbjct: 238 AFQI 241


>gi|332299227|ref|YP_004441148.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176290|gb|AEE11980.1| Trans-hexaprenyltranstransferase [Porphyromonas asaccharolytica DSM
           20707]
          Length = 327

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 12/225 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALR 74
           I   ++         +Q+       +     L  GK IR  +V  CA L     +   L 
Sbjct: 13  ITDFVEAFEQDFRQSLQSDAPVLSHALEHLRLSSGKHIRPIIVGLCAQLCAGQTNEQTLS 72

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF-EIISS 133
               IE +H  SLIHDD+  +D    RRG+PT++  Y    A++ G+ +L+ AF E++S 
Sbjct: 73  AALVIELLHTASLIHDDV--IDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTAFLELVSR 130

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             T     + +Q    L+    +      Q+   +     E   + +   KTGAL   + 
Sbjct: 131 EHTPEMLRVVAQAGRDLSIGELM------QLSLSKAHTYREEDYYAVVDRKTGALFEASA 184

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPK 236
           + GA+   A++ + +R    G+ +G  FQL DDL D +   D+ K
Sbjct: 185 KLGALSVDATEEQVKRCSRLGQLMGRAFQLQDDLFDYDTALDVGK 229


>gi|63034220|gb|AAY28422.1| geranylgeranyl diphosphate synthase [Paracoccus haeundaensis]
          Length = 293

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 4/217 (1%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
           T+L   L + A          L +A+ + AL  G++ R  L+   A        T +   
Sbjct: 11  TLLQTRLEEIAQGFGAVSQP-LGAAMSHGALSSGRRFRGMLMLLAAEASGGVCDTIVDAA 69

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E +H  SLI DDLP MD+  +RRG+P  H+ + E  A++ G  L+T A  +++  + 
Sbjct: 70  CAVEMVHAASLIFDDLPCMDDAGLRRGRPATHVAHGESRAVLGGIALITEAMALLAGAR- 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                +R+QL+  L+ ++G QG+  GQ LD+         V   Q +KTG L     E  
Sbjct: 129 GASGTVRAQLVRILSRSLGPQGLCAGQDLDLHAAKNG-AGVEQEQDLKTGVLFIAGLEML 187

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A++      E+ ++  FG  LG +FQ  DDLLD   D
Sbjct: 188 AVIKEFDAEEQTQMIDFGRQLGRVFQSYDDLLDVVGD 224


>gi|116495118|ref|YP_806852.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
 gi|227534867|ref|ZP_03964916.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|116105268|gb|ABJ70410.1| farnesyl-diphosphate synthase [Lactobacillus casei ATCC 334]
 gi|227187623|gb|EEI67690.1| geranyltranstransferase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 283

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 17/234 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L      ++  LD+ L   A       N  L +A+ Y++  GGK++R  L+    ++++ 
Sbjct: 5   LAGWRTAVEQTLDEQLAAVA-------NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDG 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL   AA+E +H YSLIHDDLP+MD+  +RRGKPT H Q+ E  AI+AG+ LLT A
Sbjct: 58  VIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
           F I+S    +      +  +  L    G  GM+GGQ   +D ++E      +  + + KT
Sbjct: 118 FAILSREYPEKG----AACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GAL+  A   G +     + ++  L  F    G+ FQ+ DD+ D      +L K
Sbjct: 174 GALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGK 227


>gi|218677523|ref|ZP_03525420.1| farnesyltranstransferase protein [Rhizobium etli CIAT 894]
          Length = 195

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 10/182 (5%)

Query: 53  IRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
           +R  L  + + +    +   A R  AAIE +HC SL+HDDLP  DN  +RRG+PTVH  +
Sbjct: 1   MRPKLCLKVSYVCGEKDPELATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLF 60

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDE 170
            E  A++ G+ L+  AF+ +S  +  L   + ++++  +   +G   G++ GQ +    E
Sbjct: 61  GEPIAVLTGDALIVMAFKYLS-LQAALTPELGARMIEVVAEAVGPSHGLIAGQSM----E 115

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    +      KTG+L   A   GA+ + A           GE LG  +Q+ADD+ D 
Sbjct: 116 AMTHVPIDRYHHYKTGSLFVAAATCGALASGADP---APWSKVGELLGHAYQIADDIADT 172

Query: 231 EE 232
             
Sbjct: 173 VG 174


>gi|78483936|dbj|BAE47470.1| GGPP synthase [Paracoccus sp. N81106]
          Length = 293

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 4/217 (1%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
           T+L   L + A          L +A+ + AL  GK+ R  L+   A        T +   
Sbjct: 11  TLLQTRLEEIAQGFGAVSQP-LGAAMSHGALSSGKRFRGMLMLLAAEASGGVCDTIVDAA 69

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E +H  SLI DDLP MD+  +RRG+   H+ + E  A++ G  L+T A  +++  + 
Sbjct: 70  CAVEMVHAASLIFDDLPCMDDAGLRRGQSATHVAHGESRAVLGGIALITEAMALLAGAR- 128

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                +R+QL+  L+ ++G QG+  GQ LD+         V   Q +KTG L     E  
Sbjct: 129 GASGTVRAQLVRILSRSLGPQGLCAGQDLDLHAAKNG-AGVEQEQDLKTGVLFIAGLEML 187

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A++      E+ ++  FG  LG +FQ  DDLLD   D
Sbjct: 188 AVIKEFDAEEQTQMIDFGRQLGRVFQSYDDLLDVVGD 224


>gi|271962169|ref|YP_003336365.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
           43021]
 gi|270505344|gb|ACZ83622.1| Trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 22/236 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++  L   L      ++ +L   + ++     T+ +  L+ A      GGK+ R+ LV  
Sbjct: 12  VDERLAQDLASGLAEVEKLLRSSV-ESEDAFVTEASKHLIEA------GGKRFRAMLVLL 64

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A   +      +     IE  H  +L HDD+  MD   +RRG P+ + ++D   AI+ G
Sbjct: 65  AAQFGSPEAPGVVPGAVVIELTHLATLYHDDV--MDEAPVRRGSPSANARWDNTVAILTG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   A EI++     +                    ++ GQ+ +       E  V   
Sbjct: 123 DYLFAQASEILADLGADV----------IRIQAQTFSRLVRGQIRETIGPRPGEDHVAHY 172

Query: 181 QKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +   GA+++ AS    +RL    E +G+ +QL DDLLD   D
Sbjct: 173 IDVLADKTGSLIATSGRFGALLSGASPEIVDRLTRACEAIGVGWQLGDDLLDVASD 228


>gi|15837992|ref|NP_298680.1| octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c]
 gi|9106399|gb|AAF84200.1|AE003970_7 octaprenyl-diphosphate synthase [Xylella fastidiosa 9a5c]
          Length = 332

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + S    +   IDT++ D L      +    +  + S       GGK++R  L       
Sbjct: 16  IQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICS-------GGKRLRPMLTMLAGHA 68

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    ++ A IE IH  +L+HDD+  +D   +RR + T +  +    +++ G+ L 
Sbjct: 69  IGPTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSRSTANALWGNAPSVLVGDFLY 126

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + +F++++        N+    +L+ T N   +G +  Q+L + +   DET    + + K
Sbjct: 127 SRSFQLMTEL-----ANLEVMQILAETTNRISEGEVL-QLLHVHNPDTDETTYLRVIERK 180

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+ +HA    + R+  +G  LG  FQ+ DD+LD   
Sbjct: 181 TAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTA 228


>gi|116753666|ref|YP_842784.1| polyprenyl synthetase [Methanosaeta thermophila PT]
 gi|116665117|gb|ABK14144.1| Polyprenyl synthetase [Methanosaeta thermophila PT]
          Length = 289

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 17/218 (7%)

Query: 24  LLQTASHMQTQHNDRLL--SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           L++       Q +  L     I Y L+  GK++R  ++   +  F  +   AL    A+E
Sbjct: 10  LIEDGLGALVQESQGLHVGEVIEYVLMSPGKRVRPLILLFSSEAFGCDPRYALNAALAVE 69

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H  SLIHDD+  +D G  RRG P+   ++    +++AG+ L++ +  +ISS       
Sbjct: 70  LAHAASLIHDDI--LDCGVERRGAPSAFRRFGMEASLLAGDYLISMSIGLISSYGEP--- 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
                       +     M  G+++D+        + +     KT +L   +   G ++A
Sbjct: 125 -------AIRLFSKACMDMAEGEIIDL-SRIASPQEYYQCITKKTASLFAASARLGCMIA 176

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPKK 237
            A + ++     +G  LG+ +Q+ DDL +    D  K+
Sbjct: 177 GADREDQILYERYGLELGLAYQIVDDLEELIGIDQGKR 214


>gi|256826840|ref|YP_003150799.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM
           15641]
 gi|256582983|gb|ACU94117.1| geranylgeranyl pyrophosphate synthase [Cryptobacterium curtum DSM
           15641]
          Length = 354

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 11/235 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTEC 61
                 L   + ++  +++  + + +       N  L   + RY+  GGK+ R  +    
Sbjct: 21  ETFEDYLASYADQVGDLVNRFIPRGS---HPDMNKYLYDPLLRYSRNGGKRHRPLICFAA 77

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +   AL   AAIE  H  +LIHDD+   D   +RRG+P +H+      AI AG+
Sbjct: 78  CRAVGGDLDRALSAAAAIEHFHTAALIHDDIA--DEAELRRGEPCLHLTEGLGLAINAGD 135

Query: 122 GLLTYAFEIISSPKTQLKD---NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
             L+     +             + S+L+      I  Q +  G   D + + I      
Sbjct: 136 LGLSLVNGTVMEDDALDDATKVRVVSELITMTRRTIEGQALDIGWARDGRYD-ITPEDYL 194

Query: 179 MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++   KT           GAI+   ++ E E LR +G + G+ FQ+ DDLL+   
Sbjct: 195 VMATHKTAHYSGAVPLAIGAIVGGGTEGEIEGLRNYGLDTGLAFQIQDDLLNLIG 249


>gi|158317822|ref|YP_001510330.1| polyprenyl synthetase [Frankia sp. EAN1pec]
 gi|158113227|gb|ABW15424.1| Polyprenyl synthetase [Frankia sp. EAN1pec]
          Length = 338

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 13/202 (6%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A R+ +  GGK+ R  +V   A   + +    +    AIE  H  +L HDD+  MD 
Sbjct: 43  VTEASRHLVDAGGKRFRPMVVLLAAQFADPDAAGVVPAAVAIELTHLSTLYHDDV--MDE 100

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  + + ++    AI+ G+ L   A EI +    +    I ++ + +L      +
Sbjct: 101 APLRRGAASANARWTNTVAILTGDFLFARASEITADLGPE-ATRILARTIATLCEGQIRE 159

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            +  G   D             +   KT +L+  +   GA++A A     + L  FGE  
Sbjct: 160 TVGVGPGQDPI------EHYLRVITEKTASLIATSARLGAMLAGADPVTTDVLAAFGERF 213

Query: 218 GIIFQLADDLLDC---EEDLPK 236
           G+ FQL+DDL+D     ED  K
Sbjct: 214 GVAFQLSDDLIDVASPSEDSGK 235


>gi|160901676|ref|YP_001567257.1| polyprenyl synthetase [Petrotoga mobilis SJ95]
 gi|160359320|gb|ABX30934.1| Polyprenyl synthetase [Petrotoga mobilis SJ95]
          Length = 288

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 12/235 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFN 66
           KL E     D  + +              D L   +  Y   GGK++R +++     + +
Sbjct: 5   KLLEFKDFFDKKIKNFFENLDLE------DYLKEPLFYYIENGGKRLRPWIIYNFGQIIS 58

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           +N    + +  A+E +H  SLIHDDLP++DN  +RRG  T H+++ E  AI+AG+   T 
Sbjct: 59  INKKNLIDIAIAVEILHSSSLIHDDLPALDNAKLRRGALTTHLKFGEYKAILAGDYGFTL 118

Query: 127 AFEIISSPKT-QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             +I++     +  + +        T     QG +   + + +D+ + E ++  +   KT
Sbjct: 119 PLQIVAGLDNIKEGNKLLLVDYFIKTILKLFQGEMEDLIFEKEDKNVGEKEILEMYSKKT 178

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
           GA+  F   S  +MA       + +   G + G+ FQ+ DDL D    EED+ K+
Sbjct: 179 GAVFGFCFASPFLMAG-EAELAKEMNKIGTDFGVSFQIFDDLKDIFTKEEDIGKE 232


>gi|119872709|ref|YP_930716.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674117|gb|ABL88373.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 334

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 17/235 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           Q+    I+  L+  L                  + Y +  GGK++R  L    A   +  
Sbjct: 9   QKYGGAIERALEHYL-------SIDVAPDFREEVLYQIKTGGKRLRPLLTLAIAEAVSGQ 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL     +E IH YSLI+DD+  +D G +RRG PTV   + +  AI+ G        
Sbjct: 62  WEPALPAATIVELIHNYSLIYDDI--IDRGDVRRGMPTVRKAFGDNAAILIGIWYREAIE 119

Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEFIDETQVFMIQ 181
           E ++ +PK  +     ++++ ++     L  +      D       +   +       + 
Sbjct: 120 EAVLDTPKPLVFAKEVAKVIKAIDEGERLDILFEYAGRDDPYFIKARKRDVTVEDYIHMV 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +KTG L+  A + G +    S+   E    FG N GI FQ+ DD+LD   D  K
Sbjct: 180 SLKTGVLIAAAAKWGVLSVSDSKELAETAWNFGLNAGIAFQIIDDVLDIYGDPKK 234


>gi|268318920|ref|YP_003292576.1| hypothetical protein FI9785_426 [Lactobacillus johnsonii FI9785]
 gi|262397295|emb|CAX66309.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 350

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 19/219 (8%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---NVNHLTALRV 75
            ++ ++L+  + +     D L          GK +R   V    S     N       ++
Sbjct: 39  AINRIILKHVNTVPGLLGDALKDTFA---SPGKMLRPACVMLFGSFGPNANQKREELQKI 95

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S   
Sbjct: 96  ATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSENA 153

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             L   I             +Q +L G+     + +   I E +     K KTG L   A
Sbjct: 154 QSLHSVI--------ADGKTMQNILVGETEQYNNAYNINISEKEYLDQIKGKTGVLFGLA 205

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           C  GA  +        + + FGE LG  FQL DD+LD  
Sbjct: 206 CFIGAYESGLKVTRALKAKKFGEYLGQAFQLRDDILDYT 244


>gi|55379709|ref|YP_137559.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC
           43049]
 gi|55232434|gb|AAV47853.1| farnesyl-pyrrophosphate synthase [Haloarcula marismortui ATCC
           43049]
          Length = 280

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 14/206 (6%)

Query: 31  MQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           + +   + L   +R+ AL GGK++R  +              A+     IE +H  SL+ 
Sbjct: 19  LDSVEPEELADEVRHVALSGGKRVRPTVTVLVCEALGGEPADAVDFAVGIELVHNASLVI 78

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D   +RRG P     +    AIIA +GLL  AF + S+ +  +           
Sbjct: 79  DDI--IDESELRRGSPAAWEAFGHGPAIIASDGLLGEAFNLFSTDERAM----------- 125

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
            T +  +  +  G+ +++  E  +E +   + + KTGAL   A E GAI A +     E 
Sbjct: 126 QTVSESMVELGEGEAMELVAEPSNEKEYMELARRKTGALFRAAAELGAIAADSDPYTVEA 185

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
           +  + E +G+ FQ+ DD+LD   D  
Sbjct: 186 VGQYAERVGVAFQMRDDVLDATADAE 211


>gi|152964618|ref|YP_001360402.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
 gi|151359135|gb|ABS02138.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
          Length = 344

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 93/239 (38%), Gaps = 25/239 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + L+E    ++  L  L +  A  +    +  L+ A      GGK++R  L    
Sbjct: 18  DPALETALREALDVVEARL-RLAVGNADPIADAASRHLVEA------GGKRVRPMLTLLG 70

Query: 62  ASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           A L           L     +E  H  SL HDD+  MD+   RRG     + Y    AI+
Sbjct: 71  AHLAGSAPEVPSAVLDAAVVVELTHLASLYHDDV--MDSAPTRRGAAAAQLVYGNNVAIL 128

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---T 175
            G+ L   A  +++    +                   + +  GQ+ +       E    
Sbjct: 129 TGDLLFARASNVVAGLGPEAV----------RLQAETFERLCLGQLHETVGPKPGEDPVE 178

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
               +   KT +L+  A   GA+ A  S      +  +GE++G+ FQLADD+LD   D+
Sbjct: 179 HYLDVLSDKTASLIATAGRFGAMFAGGSGETVTAMVRYGEDVGVAFQLADDVLDLTSDV 237


>gi|332294868|ref|YP_004436791.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM
           14796]
 gi|332177971|gb|AEE13660.1| Trans-hexaprenyltranstransferase [Thermodesulfobium narugense DSM
           14796]
          Length = 314

 Score =  157 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 14/213 (6%)

Query: 25  LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           ++ A  ++T+  + L +A  + L  GGK+IR  LV   A   N +    ++  A +E IH
Sbjct: 19  IELARILETEV-ETLRNASLHLLEAGGKRIRPTLVFLSALCVNQDIEKVIKYAAVVEGIH 77

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             +LIHDD+  +D   +RRG  +V+ +Y    AI++G+ +L      +S  + +    + 
Sbjct: 78  LATLIHDDV--IDESNVRRGILSVNGKYGFKVAILSGDFILAKITHFLSLLENKEPVRLM 135

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           +++++ +       G +  Q  +   + +   +  +    KT  L+  +   G+I     
Sbjct: 136 AEVIMRMAE-----GEVMQQ--EDLFKIVSIERYIIRCTNKTARLISSSAFLGSI---DV 185

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +++     FG NLGI FQ+ DD+LD   ++ K
Sbjct: 186 LDKRNIFAEFGLNLGIAFQIIDDILDFTGEVKK 218


>gi|332524057|ref|ZP_08400309.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
 gi|332315321|gb|EGJ28306.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
          Length = 326

 Score =  157 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 14/238 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           +PS   +  + ID  +  +       +Q ++ D   + I+ A  GGK +R        S 
Sbjct: 1   MPSYWSKYPE-IDQHIKLVCQLIEKRVQVRNTDIQEAIIQLAQAGGKYLRPAFFFLFTSF 59

Query: 65  FNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 +     ++ A++E +H  +LIHDD+  +D+  +RRG+ TV  Q+ +  A+  G+
Sbjct: 60  GPKEKQDSEQLTKIAASLEILHMATLIHDDV--IDDSPLRRGQVTVQTQFGKDIAVYTGD 117

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L T  FE+I               + +      L G L  QM    ++           
Sbjct: 118 FLFTIFFELILETMQDSP----YMSINAKAMKKILVGEL-DQMHLYFNQEQSIRDYLRSI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             KT  L   A   GA    AS +   +    G ++G+ FQ+ DD+LD      D  K
Sbjct: 173 SGKTAELFRLASLEGAYFGGASPDVVSKAGRIGYHIGMTFQILDDILDYTAKEKDFNK 230


>gi|116327301|ref|YP_797021.1| geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332078|ref|YP_801796.1| geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120045|gb|ABJ78088.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125767|gb|ABJ77038.1| Geranyltranstransferase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 319

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 12/215 (5%)

Query: 21  DDLLLQTASHMQT--QHNDRLLSAIR-YALL-GGKKIRSFLVTECASLFNVNHLTALRVG 76
           D L+ +    ++T  + + ++LS I+ Y +  GGK++R  L      L   +    L VG
Sbjct: 8   DSLIRKFDKKLETIIREDLKILSEIKTYTIRSGGKRLRPILHYCLCQLLGYSGKHWLDVG 67

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           A +E IH  SL+HDD+  +D    RRG+ +V  ++   TAI+AG+ LL    + ++    
Sbjct: 68  AIVELIHAASLLHDDV--VDEAETRRGQQSVGSKFGNKTAILAGDYLLACGIDHLNDLGY 125

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
               +I +Q++  L+ +  +      QM   ++  I       I   KT +L      S 
Sbjct: 126 PELMDIFTQVIKDLSISELI------QMEWEKNPKITLDIYNKIAYGKTSSLFGAVGVSA 179

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            I++  +  EK++LR FG +LG  FQ  DD +D  
Sbjct: 180 GILSDKNDKEKKKLRQFGIDLGSFFQKKDDAIDYF 214


>gi|283457457|ref|YP_003362034.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
 gi|283133449|dbj|BAI64214.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
          Length = 353

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +  RI+  L + + QT  H+    +  LLSA      GGK++R  L    A++    +  
Sbjct: 41  SLARIEERLGEAIAQTD-HLADVASRHLLSA------GGKRVRPLLALLSAAVDGEINDE 93

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +     +E  H  +L HDD+  MD+   RRG  +  + +    AI+ G+ + + A  ++
Sbjct: 94  VIEAAVVVELTHLATLYHDDV--MDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLV 151

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S   T      R   + S T    + G L       + + +       + + KTG+L+  
Sbjct: 152 SELGT------RPMKIQSQTFERLVLGQLFETTGPREGQDL-LDHYIAVIEGKTGSLIAA 204

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A E G++++ AS+     ++ +GE +G+ FQLADD++D   D
Sbjct: 205 AGEYGSLLSGASEEVISMVKAYGELVGVAFQLADDVIDIVSD 246


>gi|195039199|ref|XP_001990881.1| GH19601 [Drosophila grimshawi]
 gi|193895077|gb|EDV93943.1| GH19601 [Drosophila grimshawi]
          Length = 449

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCYSLIHDDLP 93
           A  Y    GK +R  +    A   N +             ++    E +H  SL+HDD+ 
Sbjct: 158 ACYYFDGQGKALRPMVTLLMAKALNYHLNNESHQLVHKQRQIALFSEMVHSASLVHDDV- 216

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRGKP+V+  ++     +AG+ +L+ A  +IS  ++     + SQ++  L   
Sbjct: 217 -IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDVTIVLSQILTDLVQG 275

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +      Q+   + E             KT +L+  A ++ A++A A  N  E    +
Sbjct: 276 EFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQY 329

Query: 214 GENLGIIFQLADDLLDC---EEDLPK 236
           G N+G+ FQL DD+LD     E + K
Sbjct: 330 GRNIGLAFQLVDDMLDFVSSTEQMGK 355


>gi|149924264|ref|ZP_01912637.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
 gi|149814889|gb|EDM74454.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
          Length = 394

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 96/245 (39%), Gaps = 19/245 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQ------------TQHNDRLLSAI-RYALLGGK 51
           +P+ L+ +  R+  +L++L+ +                    +   L   +  Y L   K
Sbjct: 1   MPAYLEGSRARVVAVLEELIAEQRRRSPGIEDRTEGRLEGDPYGPVLYDLMLDYPLREAK 60

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            +R  L          N   AL   + +E  H   L+HDD+   D  ++RRG PT+H  +
Sbjct: 61  GLRPALCIATCRALGGNLEAALPTASVLELYHNAFLVHDDVE--DRSHVRRGGPTLHAAH 118

Query: 112 DEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +  A+  G+G+L      + +   +  L   +R    ++      ++G         ++
Sbjct: 119 GQAIAVNVGDGMLALTLRPLLANIERVGLGPALRILEAMAEMSERTVEGQAMELDWIRRN 178

Query: 170 EF-IDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            + + +     +   KTG          GA+ A +     E+L  F  +L + FQ+ DD+
Sbjct: 179 TWELSDDDYIEMVVRKTGWYSFIIPTRCGALCARSDPKVCEQLERFARDLSVAFQIQDDV 238

Query: 228 LDCEE 232
           L+   
Sbjct: 239 LNLVG 243


>gi|170783303|ref|YP_001711637.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169157873|emb|CAQ03081.1| putative polyprenyl diphosphate synthase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 325

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 17/198 (8%)

Query: 44  RYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           RY L  GGK++R  L    A L   N    +    AIE  H  SL HDD+  MD   +RR
Sbjct: 32  RYLLDAGGKRVRPMLALLIAQLGEGNTQQVVDAAVAIEITHLASLYHDDV--MDEADMRR 89

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P+    +    AI+AG+ L   A +I++    +                   + ++ G
Sbjct: 90  GVPSAQAVWGNSVAILAGDLLFARASKIVADLGPR----------AIRLQAATFERLVLG 139

Query: 163 QMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           Q+ +       +        +   KTG+L+  A + G I + A    +  +  FGE  G+
Sbjct: 140 QLHETIGPREGQDPIEHYLDVLADKTGSLIACAAQMGVIYSGADPELESAVLAFGERTGV 199

Query: 220 IFQLADDLLDCEEDLPKK 237
            FQL DD+LD   D P++
Sbjct: 200 AFQLVDDVLDL-ADQPEE 216


>gi|89890092|ref|ZP_01201603.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
 gi|89518365|gb|EAS21021.1| polyprenyl synthetase [Flavobacteria bacterium BBFL7]
          Length = 325

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 12/211 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNH--LTALRVGAAI 79
           L +    +       LL+ I + +    GK++R   V   A +           R  + I
Sbjct: 17  LFEKKFQLAMASRIALLNRITHFIVNRKGKQMRPMFVFLVAKMIGDGEVNDRTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+   RRG  +V+  +    A++ G+ LL+    ++ S      
Sbjct: 77  ELIHTATLVHDDV--VDDSLKRRGFFSVNALWKNKIAVLVGDYLLSKG--LLLSIDNGDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D +    ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLL---QIISVAVREMSEGELL-QIEKARRLDITEEVYYDIIRKKTATLIAACCSLGACA 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                 + E++R FGE +GI FQ+ DDL D 
Sbjct: 189 VSPGSQDVEKMREFGEMIGIAFQIKDDLFDY 219


>gi|256825934|ref|YP_003149894.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
           20547]
 gi|256689327|gb|ACV07129.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
           20547]
          Length = 324

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 20/220 (9%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +D LL +   H     +  +  A  Y +  GGK+ R  L    + L +      ++  AA
Sbjct: 20  VDALLAEVVQH----DDPFIAEASAYLMQAGGKRFRPQLALLVSGLGDGPTPEVVKAAAA 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  SL HDD+  MD+  +RRG P+ + +Y   T+++ G+ L   +  +++    + 
Sbjct: 76  VELVHLASLYHDDV--MDDADLRRGVPSANARYGNATSVVVGDMLFGKSSALVAELGPEA 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACES 195
                               +  GQ+ D +           +  +   KTGAL+  A   
Sbjct: 134 V----------RLQADTFVRLCAGQIRDERPVPAGVDPVDHLLGVLADKTGALIAAAACY 183

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GA  +       E +  FGE LG++FQLADDLLD   D  
Sbjct: 184 GAQFSGCDAATVELMGAFGERLGLVFQLADDLLDVASDAE 223


>gi|254516865|ref|ZP_05128923.1| polyprenyl synthetase [gamma proteobacterium NOR5-3]
 gi|219674370|gb|EED30738.1| polyprenyl synthetase [gamma proteobacterium NOR5-3]
          Length = 269

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 6/204 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDD 91
            N +L  A+ + +   GK++R  L+   A      V+   A     AIE IH YSLIHDD
Sbjct: 2   QNTQLNRALSHTSTNPGKRLRPQLLQAAARATGNPVSEALAAAPAEAIELIHTYSLIHDD 61

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP+MD+  +RRG+PT+H+ +DE TAI+ G+GL   AFE+I+S + QL    R  L+  L 
Sbjct: 62  LPAMDDDDMRRGRPTLHVAFDEATAILVGDGLQAKAFELIAS-EEQLSAQQRIDLVACLA 120

Query: 152 HNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G +GM+GGQ LDI+  +  +   Q+  I  +KTGAL+  A   G I+  A+ ++K  
Sbjct: 121 KAAGFEGMVGGQGLDIEATERTLSVEQLKNIHALKTGALITAALVMGGIVGQANPDQKHI 180

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L+  G+ +G+ FQ+ DD++D   D
Sbjct: 181 LKAVGDKIGLAFQIIDDVIDVRSD 204


>gi|229549603|ref|ZP_04438328.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           ATCC 29200]
 gi|255972303|ref|ZP_05422889.1| polyprenyl synthetase [Enterococcus faecalis T1]
 gi|256956509|ref|ZP_05560680.1| polyprenyl synthetase [Enterococcus faecalis DS5]
 gi|300860196|ref|ZP_07106283.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
 gi|312951206|ref|ZP_07770108.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
 gi|229305268|gb|EEN71264.1| possible trans-hexaprenyltranstransferase [Enterococcus faecalis
           ATCC 29200]
 gi|255963321|gb|EET95797.1| polyprenyl synthetase [Enterococcus faecalis T1]
 gi|256947005|gb|EEU63637.1| polyprenyl synthetase [Enterococcus faecalis DS5]
 gi|300849235|gb|EFK76985.1| polyprenyl synthetase [Enterococcus faecalis TUSoD Ef11]
 gi|310630740|gb|EFQ14023.1| polyprenyl synthetase [Enterococcus faecalis TX0102]
 gi|315034608|gb|EFT46540.1| polyprenyl synthetase [Enterococcus faecalis TX0027]
 gi|315152610|gb|EFT96626.1| polyprenyl synthetase [Enterococcus faecalis TX0031]
 gi|315159462|gb|EFU03479.1| polyprenyl synthetase [Enterococcus faecalis TX0312]
          Length = 326

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 21/224 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAA 78
           +L+ QT         + L++  R    GGK +R         L +         L++ A+
Sbjct: 20  ELIEQTLHTRNEDIEEALVTLAR---SGGKLLRPAFFFLFTQLGDEEKQEKQQLLKIAAS 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+      
Sbjct: 77  LEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG- 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
                S+ M       G++ +L G   QM    D  +           KT  L   +C  
Sbjct: 134 -----SEFMKINAQ--GMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLE 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
           GA   H+S+  +   +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 187 GAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKK 230


>gi|62959219|gb|AAY23717.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP1768]
          Length = 145

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 86/145 (59%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+PSMDN  +RRG+PT H  Y +  AI+AG+ +L+ AFE+++     +  +   +++ 
Sbjct: 1   HDDMPSMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAFEMVAVRSANVPADRLLRVVG 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L    G  G++GGQ++D++ E   +D   +  I   KT AL+     +GA++  A+  +
Sbjct: 61  ELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKTAALLRACVVTGALIGGANDEQ 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
            + +R +   +G+ FQ+ DD+LD E
Sbjct: 121 LQAMRTYANGIGLAFQIIDDILDVE 145


>gi|313763299|gb|EFS34663.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1]
 gi|313814961|gb|EFS52675.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1]
 gi|313829356|gb|EFS67070.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2]
 gi|314916753|gb|EFS80584.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4]
 gi|314919121|gb|EFS82952.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1]
 gi|314921201|gb|EFS85032.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3]
 gi|314930371|gb|EFS94202.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1]
 gi|314956154|gb|EFT00550.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1]
 gi|314959687|gb|EFT03789.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1]
 gi|314969768|gb|EFT13866.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1]
 gi|315098089|gb|EFT70065.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2]
 gi|315102693|gb|EFT74669.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1]
 gi|315108835|gb|EFT80811.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2]
 gi|327451646|gb|EGE98300.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3]
 gi|327452299|gb|EGE98953.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2]
 gi|328752132|gb|EGF65748.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2]
 gi|328757024|gb|EGF70640.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1]
          Length = 324

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 17/235 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+    S+  +       +++D L + A          +  A  + +  GGK+ R  LV 
Sbjct: 1   MSYSASSEFTDLVSAKLALIEDELGRQAG----ADTPFVTEAANHIISAGGKRFRPLLVV 56

Query: 60  ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ ++++    AI+
Sbjct: 57  LCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSANLRWGNSVAIM 114

Query: 119 AGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            G+ L + A   ++      +K   R+   L        +G   GQ              
Sbjct: 115 VGDYLFSKASLAVAELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDP--------LAHY 166

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLADDL+D   
Sbjct: 167 LKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221


>gi|20092943|ref|NP_619018.1| polyprenyl synthetase [Methanosarcina acetivorans C2A]
 gi|19918255|gb|AAM07498.1| polyprenyl synthetase [Methanosarcina acetivorans C2A]
          Length = 295

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 24/233 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
            E  + ++  ++D + +    ++     +++  + +   GGK+IR  ++   + + + ++
Sbjct: 16  WEEYRYVEAGIEDSIAR----IEDSSLKKMVEHVCH--FGGKRIRPIILLLASEICSGSY 69

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             +L    A+E +H  SLIHDDL  +D G IRR  P+   ++    A++ G+ L+  +  
Sbjct: 70  SRSLDAALAVEMMHSASLIHDDL--LDQGLIRRNLPSAPEKFGPSRALLCGDYLIAKSIA 127

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGA 187
            IS            + ++      G+  M  G++LD++  D+   E   F     KT +
Sbjct: 128 FIS---------PYGEKVIRDFGKAGMD-MAEGEVLDLRLDDDKFGEDDYFKCIYKKTAS 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD----CEEDLPK 236
           L   +   GA    A +   ER   FG +LG  +Q+ DD+L+     E    K
Sbjct: 178 LFAISASIGAYTGGADEALAERFSFFGNSLGTAYQIVDDILEFLEVVEGKESK 230


>gi|326383002|ref|ZP_08204691.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198138|gb|EGD55323.1| trans-hexaprenyltranstransferase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 339

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 22/240 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
            G    ++QE+ +R++ +L   L        +  +D L+ A  + A  GGK+ R      
Sbjct: 12  TGEFAGQVQESLQRVEDLLISEL--------SSGDDILVEAATHLAKAGGKRFRPMFAIL 63

Query: 61  CASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            +           +     IE  H  +L HDD+  MD   +RRG P+ + ++    AI+A
Sbjct: 64  SSHFGAKPGADEVITSATVIEMTHLATLYHDDV--MDEAALRRGAPSANARWSNSIAILA 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   A  ++S+   +       +++      +    M     +   D+ I       
Sbjct: 122 GDFLFARASHLVSTLGPEA-----VRIIADTFAELVTGQMRETVGVSAGDDPI--EHYLK 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           +   KTG+L+  A   GA  A A +   + L   G+ +G  FQ++DD++D      D  K
Sbjct: 175 VVWEKTGSLIATAGRFGAYTAGADETTVDTLARLGDVVGTAFQVSDDIIDIASVTGDSGK 234


>gi|153004002|ref|YP_001378327.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027575|gb|ABS25343.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 299

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 84/238 (35%), Positives = 120/238 (50%), Gaps = 18/238 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNV 67
           +Q   + +   L+  L   A   + Q  +RL+ AIRYALLGG K++R  LV         
Sbjct: 13  IQSYLRSVTERLEPRLAALADERRGQGPERLVEAIRYALLGGGKRLRPALVLAACEAHGG 72

Query: 68  NHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           +      A+R   A+E +H YSL+HDDLP+MD+  +RRG+PTVH  YDE TA++ G+ L 
Sbjct: 73  DASDGSLAMRFAVALEAVHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEATAVLVGDALQ 132

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQK 182
           + AF  +      L     +   L+         M+ GQ  DIQ E   + E +V  + +
Sbjct: 133 SLAFRHL------LAAPQPTAAALARLLAENAYLMVEGQARDIQGEHARLAEAEVLELMR 186

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KTGAL+  A       A  +    E +   G  LG+ FQ+ADDLLD   D   L K+
Sbjct: 187 TKTGALLASAVAG---GAACAGAAVEAVYPIGLKLGLAFQIADDLLDLTADTQTLGKR 241


>gi|254173799|ref|ZP_04880471.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4]
 gi|214032491|gb|EEB73321.1| hypothetical protein TAM4_2178 [Thermococcus sp. AM4]
          Length = 306

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 23/208 (11%)

Query: 36  NDRLLSAIRYAL------------LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           ++RL+ A+  ++             GGK+IR  +    A    +    AL + +AIE IH
Sbjct: 5   DERLVEALEGSVELAKKIGEYIIRSGGKRIRPRITLAVAKGLGLEEKDALDLASAIELIH 64

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+HDD+  +D    RR  PTV +++    A+++G+ L   A  II+  K ++ D + 
Sbjct: 65  TASLVHDDV--IDLAEKRRNNPTVVMRWGPELAVLSGDFLFVRALRIIAGKKVEMVDYV- 121

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           ++++  +     LQ  + G         +D    + I   KTG L   +    A      
Sbjct: 122 AKVVEDMVKAEILQEAVRG------SVHLDLETYYRIIDGKTGRLFGASFALPAYYHG-- 173

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231
           +   E L   G  +G  FQ+ DD+LD  
Sbjct: 174 KTYWEELDRAGTLVGRAFQIVDDVLDYF 201


>gi|167566511|ref|ZP_02359427.1| geranyltranstransferase [Burkholderia oklahomensis EO147]
          Length = 248

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 94/186 (50%), Gaps = 4/186 (2%)

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R  L      L   +        AA+E IH YSL+HDD+P MD+  +RRGKPTVH++YD
Sbjct: 1   MRPLLCHAAGELTGASEAALNAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVEYD 60

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--E 170
           E TA++ G+ L + AF  ++       D   +  +  L    G  GM GGQ +D+     
Sbjct: 61  EATALLVGDALQSQAFVALTDAAALPLDRQPAL-VRELALASGSIGMAGGQAIDLASVGH 119

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLD 229
            +    +  + +MKTGAL+  +   GA+     S++    L  +   +G+ FQ+ DD+LD
Sbjct: 120 ALSRDALETMHRMKTGALLRASVRMGALAGETPSEDAMRALDAYAAAVGLAFQVVDDILD 179

Query: 230 CEEDLP 235
              D  
Sbjct: 180 VTTDSA 185


>gi|329666771|gb|AEB92719.1| putative polyprenyl synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 350

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 16/189 (8%)

Query: 49  GGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            GK +R   V    S     N       ++  +IE +H  +LIHDD+  +D   +R G+P
Sbjct: 66  PGKMLRPACVMLFGSFGPNANQKREELQKIATSIETLHNATLIHDDI--IDESSMRHGRP 123

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           ++  +Y +  A+ AG+ L   +  ++S     L   I             +Q +L G+  
Sbjct: 124 SIQTKYGKHIAVYAGDYLFALSLTLLSENAQSLHSVI--------ADGKTMQNILVGETE 175

Query: 166 DIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              + +   I E +     K KTG L   AC  GA  +        + + FGE LG  FQ
Sbjct: 176 QYNNAYNINISEKEYLDQIKGKTGVLFGLACFIGAYESGLKVTRALKAKKFGEYLGQAFQ 235

Query: 223 LADDLLDCE 231
           L DD+LD  
Sbjct: 236 LRDDILDYT 244


>gi|83648584|ref|YP_437019.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
           2396]
 gi|83636627|gb|ABC32594.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
           2396]
          Length = 322

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 8/169 (4%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N      L++ A IE +H  +L+HDD+  +D   +RRG+ T + ++    +++ G+ L
Sbjct: 58  ALNATEKHYLKLAAIIEFLHTATLLHDDV--VDTSDLRRGRDTANAKWGNAPSVLVGDFL 115

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++   +     ++    +L+   N+  +G +  Q+ + ++  I E Q   +   
Sbjct: 116 YSRAFQMMVELR-----DMDVMSVLANATNVIAEGEVL-QLTNCKNPDITEAQYMEVITA 169

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   A  S AI+  AS      ++ FG  LGI FQL DD+LD + 
Sbjct: 170 KTAMLFEAASHSAAILCQASAETTSDMKEFGLELGIAFQLIDDVLDYQG 218


>gi|328950331|ref|YP_004367666.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884]
 gi|328450655|gb|AEB11556.1| Geranyltranstransferase [Marinithermus hydrothermalis DSM 14884]
          Length = 319

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 17/234 (7%)

Query: 1   MNGG-LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN   L   L+ +  R +  L +L+      ++   +D +         GGK+IR  LV 
Sbjct: 1   MNAETLTLDLETSLGRFEARLRELVDSDVEFIRLIQDDLV-------TAGGKRIRPRLVL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             +          + +  A+E +H  +L+HDDL  +D+   RRG+     +Y    ++++
Sbjct: 54  LASRALGGVPRE-MELALAVELLHSATLLHDDL--VDDAETRRGREAAFRKYGNAVSVLS 110

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL+    +++         + + +   L       G +    +    E+  +     
Sbjct: 111 GDYLLSRVLYLLAETGRLELVRLFADVARQLAE-----GEVFQFQVAALGEY-SKANYER 164

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KT ALM    E  A++A A+   +E LR FG   G++FQ+ DD LD   D
Sbjct: 165 IIAGKTAALMRACTEGVALLADAAPMVREALRRFGYEYGMVFQMRDDYLDLMGD 218


>gi|281490672|ref|YP_003352652.1| polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281374441|gb|ADA63962.1| Polyprenyl synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 326

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 10/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--- 65
             ++   I   L D+       ++  + +   +  ++A  GGK +R  L    A +    
Sbjct: 4   FWQDYPEIQNKLKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNG 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           + +    +++ A++E +H  +LIHDD+  +D+  +RRG P++  Q+ +  A+ AG+ + T
Sbjct: 64  SKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPLRRGLPSIESQFGKDVAVYAGDFVYT 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             FE++           ++    + +    LQG L  QM    D+     +       KT
Sbjct: 122 VYFELLIETMNGTSFVAKN----AQSMKKILQGELT-QMQSAFDKNNTARRYMKAISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             L+  +C  G   A   +  +   R  G  +G+ FQ+ DD+L+  
Sbjct: 177 AELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDILNFT 222


>gi|15672163|ref|NP_266337.1| prenyl transferase [Lactococcus lactis subsp. lactis Il1403]
 gi|12723034|gb|AAK04279.1|AE006256_1 prenyl transferase [Lactococcus lactis subsp. lactis Il1403]
          Length = 326

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 10/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--- 65
             ++   I   L D+       ++  + +   +  ++A  GGK +R  L    A +    
Sbjct: 4   FWQDYPEIQNKLKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNG 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           + +    +++ A++E +H  +LIHDD+  +D+  +RRG P++  Q+ +  A+ AG+ + T
Sbjct: 64  SKDEEKIIKIAASLEMLHSATLIHDDI--IDDSPLRRGLPSIESQFGKDVAVYAGDFVYT 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             FE++           ++    + +    LQG L  QM    D+     +       KT
Sbjct: 122 VYFELLIETMNGTSFVAKN----AQSMKKILQGELT-QMQSAFDKNNTARRYMKAISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             L+  +C  G   A   +  +   R  G  +G+ FQ+ DD+L+  
Sbjct: 177 AELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDILNFT 222


>gi|291514908|emb|CBK64118.1| Geranylgeranyl pyrophosphate synthase [Alistipes shahii WAL 8301]
          Length = 329

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 15/229 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL--- 64
           L +  K +   L + L +      T   + L   +RYAL   GK IR  LV   A++   
Sbjct: 4   LDDIRKPVTAEL-EALDEFVDRQFTAEGELLSDMLRYALSARGKGIRPMLVMLSAAMNAP 62

Query: 65  --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    A      +E IH  SLIHDD+  +D   +RRGKP+ + ++    A+I G+ 
Sbjct: 63  VKGAAAGRRACLAAMLVEMIHVASLIHDDV--IDEADMRRGKPSANARWQSHKAVILGDY 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           +L     I                M +L     LQ           +  +       I  
Sbjct: 121 ILAKNMNIGLQSGQFDLVTHVCGSMAALCEGEVLQDECAA------NSTMTRQAYLDIIY 174

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            KT +L+  +  +GA+   A+++    +R FGE +G+ FQ+ DD+LD  
Sbjct: 175 KKTASLLGVSASAGALAVGATRDRVATMRRFGEAVGMAFQIQDDILDYT 223


>gi|315498623|ref|YP_004087427.1| polyprenyl synthetase [Asticcacaulis excentricus CB 48]
 gi|315416635|gb|ADU13276.1| Polyprenyl synthetase [Asticcacaulis excentricus CB 48]
          Length = 343

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 15/223 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
            ++   ++ I+ + + Q+   +     + L+SA      GGK++R  L    A +    +
Sbjct: 31  ADDMAAVNAIITERM-QSDVAVIPALAEHLVSA------GGKRLRPLLCVAAARVAGTTN 83

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
           L   ++ AA+E IH  +L+HDD+  +D+  +RRGK   H+ +   ++++ G+ L   AFE
Sbjct: 84  LHHRKLSAAVEFIHTATLLHDDV--VDSSQLRRGKVAAHLIWGAPSSVLVGDFLFARAFE 141

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++        D++++  +LS    +  +G +  Q++   D  + E     I   KT  L 
Sbjct: 142 LMVET-----DSLQALGILSKASGVIAEGEVL-QLMKAYDVNLTEATYIDIIAAKTAVLF 195

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A ESGA+ A AS   ++ LR +G NLG+ FQ+ DD LD   
Sbjct: 196 AAAAESGAVAAGASSAGQQALRDYGLNLGLAFQIQDDALDYGG 238


>gi|329939715|ref|ZP_08289016.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
           M045]
 gi|329301285|gb|EGG45180.1| polyprenyl diphosphate synthase [Streptomyces griseoaurantiacus
           M045]
          Length = 384

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 17/231 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  + +D++ + +      H   QH D   +A       GK IR  LV   A+    +  
Sbjct: 65  ELRRAVDSLPESMRRIGLYHFGWQHADGSPAAGN----AGKAIRPALVLTAAATLGGHRQ 120

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+R  AA+E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A  +
Sbjct: 121 AAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRPTAWTVFGDSDAILAGDALQALAHRL 178

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-----IQDEFIDETQVFMIQKMKT 185
           ++           ++L         +  +  GQ  D      + E +   +V  + + KT
Sbjct: 179 LAEDPHPASAAAAARL------ASCVVELCAGQHADTALEERRPEDVTLEEVLAMAEAKT 232

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GAL+  AC  GA+ A A   E E L  FG   G+ FQL DD++    D  +
Sbjct: 233 GALLGCACAMGALYAGAPHGEVEALDAFGRQAGLAFQLIDDVIGIWGDPGR 283


>gi|282855260|ref|ZP_06264592.1| polyprenyl synthetase [Propionibacterium acnes J139]
 gi|282581848|gb|EFB87233.1| polyprenyl synthetase [Propionibacterium acnes J139]
 gi|314924082|gb|EFS87913.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1]
 gi|314965044|gb|EFT09143.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2]
 gi|314983126|gb|EFT27218.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3]
 gi|315090668|gb|EFT62644.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4]
 gi|315093825|gb|EFT65801.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1]
 gi|315104041|gb|EFT76017.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2]
 gi|327326484|gb|EGE68273.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL103PA1]
          Length = 324

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 17/235 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+    S+  +       +++D L + A          +  A  + +  GGK+ R  LV 
Sbjct: 1   MSYSASSEFTDLVSAKLALIEDELGRQAG----ADTPFVTEAANHIISAGGKRFRPLLVV 56

Query: 60  ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ ++++    AI+
Sbjct: 57  LCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSANLRWGNSVAIM 114

Query: 119 AGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            G+ L + A   ++      +K   R+   L        +G   GQ              
Sbjct: 115 VGDYLFSRASLAVAELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDP--------LAHY 166

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLADDL+D   
Sbjct: 167 LKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221


>gi|326405759|gb|ADZ62830.1| polyprenyl transferase [Lactococcus lactis subsp. lactis CV56]
          Length = 326

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 10/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--- 65
             ++   I   L D+       ++  + +   +  ++A  GGK +R  L    A +    
Sbjct: 4   FWQDYPEIQNKLKDVQALMIERLKINNQEIEAALEKFASRGGKMVRPALFLLFAGIVPNG 63

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           + +    +++ A++E +H  +LIHDD+  +D+  +RRG P++  Q+ +  A+ AG+ + T
Sbjct: 64  SKDEEKLIKIAASLEMLHSATLIHDDI--IDDSPLRRGLPSIESQFGKDVAVYAGDFVYT 121

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             FE++           ++    + +    LQG L  QM    D+     +       KT
Sbjct: 122 VYFELLIETMNGTSFVAKN----AQSMKKILQGELT-QMQSAFDKNNTARRYMKAISGKT 176

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             L+  +C  G   A   +  +   R  G  +G+ FQ+ DD+L+  
Sbjct: 177 AELLSLSCLEGVYFAGGDKKLQHSARKIGRAIGLAFQVYDDILNFT 222


>gi|307579659|gb|ADN63628.1| polyprenyl synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 309

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 15/219 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             IDT++ D L      +    +  + S       GGK++R  L                
Sbjct: 2   AAIDTLIHDRLTSDIVLINQIADHIICS-------GGKRLRPMLTMLAGHAIGPTGPHHH 54

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  +L+HDD+  +D   +RR + T +  +    +++ G+ L + +F++++ 
Sbjct: 55  QLAAIIEFIHTATLLHDDV--VDGSELRRSRSTANALWGNAPSVLVGDFLYSRSFQLMTE 112

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  N+    +L+ T N   +G +  Q+L + +   DET    + + KT  L   A 
Sbjct: 113 L-----ANLEVMQILAETTNRISEGEVL-QLLHVHNPDTDETTYLSVIERKTAILFAAAA 166

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + GA+ +HA    + R+  +G  LG  FQ+ DD+LD   
Sbjct: 167 QLGALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTA 205


>gi|298346132|ref|YP_003718819.1| putative trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC
           43063]
 gi|304390108|ref|ZP_07372062.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315657365|ref|ZP_07910247.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|298236193|gb|ADI67325.1| possible trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC
           43063]
 gi|304326590|gb|EFL93834.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315491837|gb|EFU81446.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 350

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 18/224 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---T 71
           ++   LDD+        QTQ              GGK++R  L    + L   N      
Sbjct: 27  KLRDALDDIEQMLVQETQTQREKTSALVSHLRAAGGKRMRPLLTLLVSQLGAPNQPVSSQ 86

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +   A+E  H  SL HDDL  MD   +RRG P  H+Q++   A++AG+ + + A  ++
Sbjct: 87  VKQGAVAVELTHLASLYHDDL--MDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRASLLV 144

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ---KMKTGAL 188
           S     +             H+   + +  GQM DI      +  +       + KTGAL
Sbjct: 145 SGLNPTIVAQ----------HSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGAL 194

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  A   GA ++         +  FGE+LG+ FQ+ADD+LD + 
Sbjct: 195 IGCAALYGAELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQA 238


>gi|328906289|gb|EGG26064.1| heptaprenyl diphosphate synthase component II [Propionibacterium
           sp. P08]
          Length = 324

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 21/237 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+    S+  +       +++D L + A          +  A  + +  GGK+ R  LV 
Sbjct: 1   MSYSASSEFTDLVSAKLALIEDELGRQAG----ADTPFVAEAANHIISAGGKRFRPLLVV 56

Query: 60  ECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            C+      +    +R    +E  H  SL HDD+  MD    RRG P+ ++++    AI+
Sbjct: 57  LCSQFGHEADEADLVRAAVVVELTHVASLYHDDV--MDEASKRRGAPSANLRWGNSVAIM 114

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--- 175
            G+ L + A   ++       D +R Q             ++ GQ+ + +     E    
Sbjct: 115 VGDYLFSKASLAVAELGV---DFVRLQ-------ARTFSRLVQGQIAETRGPSQGEDPLA 164

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLADDL+D   
Sbjct: 165 HYLKVVADKTGSLIATSAVFGAMVSHASAENVTALEQFGEDIGEVFQLADDLIDVTS 221


>gi|307297796|ref|ZP_07577602.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306917056|gb|EFN47438.1| Polyprenyl synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 279

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 16/233 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           KL E S   +  L + L +   H+     D     + Y  L GGK++R++L+ E +    
Sbjct: 2   KLAEFSPFFNCKLKNFLDEL--HISKPFKD----VVSYTPLAGGKRLRAYLIWELSRYTG 55

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                AL+ G A+E  H  SLIHDDLP++DN  IRRG P+ HI++ E  AI+AG+ L+ +
Sbjct: 56  FGEENALKAGIAVELFHSGSLIHDDLPAIDNDTIRRGLPSSHIKFGESKAILAGDFLMLF 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              + SS   + +       +L L     L+ ++ G+  D+  E     Q+  I   KTG
Sbjct: 116 PGRVFSSLDLETR---YIHPILELWQETSLK-VVEGEFDDVFPEDESREQMERIHAAKTG 171

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           AL  F   +  I     + + + +   G   G ++Q+ DD+ D    E +L K
Sbjct: 172 ALFGFCFAAPFI--REKREKIDEMYKLGVRFGKLYQMMDDIKDVISTESELGK 222


>gi|327382666|gb|AEA54142.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei LC2W]
 gi|327385860|gb|AEA57334.1| Geranylgeranyl diphosphate synthase [Lactobacillus casei BD-II]
          Length = 283

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 17/234 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L      ++  LD+ L   A       N  L +A+ Y++  GGK++R  L+    ++++ 
Sbjct: 5   LAGWRTAVEQTLDEQLAAVA-------NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDG 57

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL   AA+E +H YSLIHDDLP+MD+  +RRGKPT H Q+ E  AI+AG+ LLT A
Sbjct: 58  VIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
           F I+S    +      +  +  L    G  GM+GGQ   +D ++E      +  + + KT
Sbjct: 118 FAILSRQYREKG----AACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GAL+  A   G +     + ++  L  F    G+ FQ+ DD+ D      +L K
Sbjct: 174 GALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGK 227


>gi|116495626|ref|YP_807360.1| geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
 gi|116105776|gb|ABJ70918.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei ATCC
           334]
          Length = 322

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 8/212 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           + + Q   H+      ++ + I+  +  GGK +RS L+   A L N ++   +  GAAIE
Sbjct: 17  EQIQQRLEHVAVLREPQVHALIQQQINAGGKMLRSGLMLMLARLGNPDNDDLITAGAAIE 76

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +L+HDD+  +D+  +RRG  TV  +     AI AG+ L    F+++S       D
Sbjct: 77  ALHLATLVHDDV--LDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNPATTD 134

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
              +  ++         G +  Q           ++       KT AL   A  +GA + 
Sbjct: 135 LATNARVMKH----IFMGEV-DQNGPSAPLIPSVSEYLKAIAGKTAALFALATYTGATIG 189

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                EK+    FG  LG+ FQ+ DDLLD  +
Sbjct: 190 QLDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQ 221


>gi|191639107|ref|YP_001988273.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23]
 gi|239630025|ref|ZP_04673056.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|301067168|ref|YP_003789191.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
 gi|190713409|emb|CAQ67415.1| Polyprenyl synthetase family protein [Lactobacillus casei BL23]
 gi|239527637|gb|EEQ66638.1| geranylgeranyl pyrophosphate synthase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|300439575|gb|ADK19341.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus casei str.
           Zhang]
 gi|327383175|gb|AEA54651.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei LC2W]
 gi|327386359|gb|AEA57833.1| Octaprenyl-diphosphate synthase protein [Lactobacillus casei BD-II]
          Length = 322

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 8/212 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           + + Q   H+      ++ + I+  +  GGK +RS L+   A L N ++   +  GAAIE
Sbjct: 17  EQIQQRLEHVAVLREPQVHALIQQQINAGGKMLRSGLMLMLARLGNPDNDDLITAGAAIE 76

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +L+HDD+  +D+  +RRG  TV  +     AI AG+ L    F+++S       D
Sbjct: 77  ALHLATLVHDDV--LDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNPATTD 134

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
              +  ++         G +  Q           ++       KT AL   A  +GA + 
Sbjct: 135 LATNARVMKH----IFMGEV-DQNGPSAPLIPSVSEYLKAIAGKTAALFALATYTGATIG 189

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                EK+    FG  LG+ FQ+ DDLLD  +
Sbjct: 190 QLDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQ 221


>gi|327333136|gb|EGE74863.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL097PA1]
          Length = 324

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 17/235 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+    S+  +       +++D L + A          +  A  + +  GGK+ R  LV 
Sbjct: 1   MSYSASSEFTDLVSAKLALIEDELGRQAG----ADTPFVTEAANHIISAGGKRFRPLLVV 56

Query: 60  ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ ++++    AI+
Sbjct: 57  LCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSANLRWGNSVAIM 114

Query: 119 AGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            G+ L + A   ++      +K   R+   L        +G   GQ              
Sbjct: 115 VGDYLFSRASLAVAELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDP--------LAHY 166

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLADDL+D   
Sbjct: 167 LKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221


>gi|78358229|ref|YP_389678.1| trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220634|gb|ABB39983.1| Trans-hexaprenyltranstransferase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 322

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 11/192 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  L    A            +  ++E +H  +L+HDD+  +D+  +RRG P  
Sbjct: 40  AGGKRLRPLLAILFARALGRGGDDIYPLACSVELLHSATLLHDDI--IDDAALRRGLPAA 97

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  +     I+AG+ LL  A  I+S           ++ ++              ++  +
Sbjct: 98  HTLFGSTRTILAGDALLALANLIVSRYGDTRLTECIARAIIETATGEIA------EIEYL 151

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +     +     I K KT  ++  +C+ GAI A A+  +++    FG NLGI FQ+ DD 
Sbjct: 152 RSTGHPQETYIEIIKGKTAWMIQASCQLGAIAAGATAQQEQAACDFGMNLGIAFQIVDDA 211

Query: 228 LDCE---EDLPK 236
           LD      +  K
Sbjct: 212 LDFSPSAGETGK 223


>gi|320536785|ref|ZP_08036784.1| polyprenyl synthetase [Treponema phagedenis F0421]
 gi|320146361|gb|EFW37978.1| polyprenyl synthetase [Treponema phagedenis F0421]
          Length = 349

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 17/194 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           I +   GGK IR       A L      +    +   AA+E +H  +L+HDD+  +DN  
Sbjct: 63  IEFLHAGGKLIRPVFFLLFAHLGEETFDSDPAIIETAAALELLHMATLVHDDI--IDNSP 120

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG  ++   + +  A+ AG+ LLT  F +I+   +  +  ++S           +Q +
Sbjct: 121 LRRGIASIQNIHGKSIAVYAGDYLLTVFFTLIAKNISDKELLVQS--------AASMQRL 172

Query: 160 LGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           L G++   +   +  I  +  F I + KT  L   +C  G   A  ++  +E+ +  G+N
Sbjct: 173 LEGELHQYRMKFNPEITVSDYFQIIEGKTAELFYLSCYLGISFAK-NKTYQEQAKRIGKN 231

Query: 217 LGIIFQLADDLLDC 230
           +G  FQ+ DD+LD 
Sbjct: 232 IGCAFQIIDDILDY 245


>gi|148257671|ref|YP_001242256.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|146409844|gb|ABQ38350.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 289

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 14/228 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
           +   RI+     L+   A   +     RL +A++ A+   G ++R  L    A+    + 
Sbjct: 2   DVMARIEK---SLVAAVALADRPGCPPRLSAAMQAAVFPKGARVRPRLCHAVAAACGDDE 58

Query: 70  LTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             A     +AIE +HC SL+HDDLP  DN  +RRG+P+VH  + E  A++AG+ L+  AF
Sbjct: 59  PAATDAAGSAIELLHCASLVHDDLPCFDNAKLRRGRPSVHAAFGEPLAVLAGDALIVLAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           + ++  K++      +QL+ ++   +G+  G+  GQ  + +     E  +    + KTGA
Sbjct: 119 QTLA--KSRCSPLRLAQLIATIGDAVGVPHGIAAGQAWECE----PEIDLSHYHRSKTGA 172

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L   A  SGA  A       E  R  GE +G  +Q+ADD+ D   D  
Sbjct: 173 LFAAATVSGAAAAG--HANPEAWRSLGEKIGEAYQVADDIRDAASDEE 218


>gi|185813044|gb|ACC77966.1| geranyl pyrophosphate synthase [Catharanthus roseus]
          Length = 420

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 28/230 (12%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALR----- 74
           +L      M      +L SA  Y   LG  GK+ R  ++   A+  +             
Sbjct: 92  ILANRLRSMVVAEVPKLASAAEYFFKLGVEGKRFRPTVLLLMATAIDAPISRTPPDTSLD 151

Query: 75  ------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                       +    + IH  SL+HDD+  +D+   RRG  +++       A++AG+ 
Sbjct: 152 TLSTELRLRQQTIAEITKMIHVASLLHDDV--LDDAETRRGIGSLNFVMGNKLAVLAGDF 209

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL+ A   ++S K     ++ + ++  L     +      QM    D+            
Sbjct: 210 LLSRACVALASLKNTEVVSLLATVVEHLVTGETM------QMTTTSDQRCSMEYYMQKTY 263

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             T +L+  +C++ A++A  +         +G+NLG+ FQL DD+LD   
Sbjct: 264 YMTASLISNSCKAIALLAGQTSEVAMLAYEYGKNLGLAFQLIDDVLDFTG 313


>gi|50843372|ref|YP_056599.1| heptaprenyl diphosphate synthase component II [Propionibacterium
           acnes KPA171202]
 gi|289425619|ref|ZP_06427391.1| polyprenyl synthetase [Propionibacterium acnes SK187]
 gi|289426999|ref|ZP_06428718.1| polyprenyl synthetase [Propionibacterium acnes J165]
 gi|295131445|ref|YP_003582108.1| polyprenyl synthetase [Propionibacterium acnes SK137]
 gi|50840974|gb|AAT83641.1| heptaprenyl diphosphate synthase component II [Propionibacterium
           acnes KPA171202]
 gi|289153920|gb|EFD02613.1| polyprenyl synthetase [Propionibacterium acnes SK187]
 gi|289159821|gb|EFD08006.1| polyprenyl synthetase [Propionibacterium acnes J165]
 gi|291375644|gb|ADD99498.1| polyprenyl synthetase [Propionibacterium acnes SK137]
 gi|313773345|gb|EFS39311.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1]
 gi|313793594|gb|EFS41634.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1]
 gi|313802896|gb|EFS44109.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2]
 gi|313806342|gb|EFS44858.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2]
 gi|313810752|gb|EFS48466.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1]
 gi|313813689|gb|EFS51403.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1]
 gi|313821259|gb|EFS58973.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1]
 gi|313822286|gb|EFS60000.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2]
 gi|313826156|gb|EFS63870.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1]
 gi|313831063|gb|EFS68777.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1]
 gi|313833193|gb|EFS70907.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1]
 gi|313838164|gb|EFS75878.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1]
 gi|314926005|gb|EFS89836.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3]
 gi|314962260|gb|EFT06361.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2]
 gi|314963225|gb|EFT07325.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1]
 gi|314973953|gb|EFT18049.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1]
 gi|314976881|gb|EFT20976.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1]
 gi|314979346|gb|EFT23440.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2]
 gi|314985002|gb|EFT29094.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1]
 gi|314986322|gb|EFT30414.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2]
 gi|314988581|gb|EFT32672.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3]
 gi|315079698|gb|EFT51686.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2]
 gi|315083912|gb|EFT55888.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2]
 gi|315085048|gb|EFT57024.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3]
 gi|315089477|gb|EFT61453.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1]
 gi|315097704|gb|EFT69680.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1]
 gi|315107928|gb|EFT79904.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1]
 gi|327325724|gb|EGE67521.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA3]
 gi|327330828|gb|EGE72573.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL096PA2]
 gi|327442879|gb|EGE89533.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2]
 gi|327445271|gb|EGE91925.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1]
 gi|327447743|gb|EGE94397.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2]
 gi|327452516|gb|EGE99170.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1]
 gi|328755076|gb|EGF68692.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1]
 gi|328761560|gb|EGF75078.1| trans-hexaprenyltranstransferase [Propionibacterium acnes HL099PA1]
 gi|332676315|gb|AEE73131.1| heptaprenyl diphosphate synthase component 2 [Propionibacterium
           acnes 266]
          Length = 324

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 17/235 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+    S+  +       +++D L + A          +  A  + +  GGK+ R  LV 
Sbjct: 1   MSYSASSEFTDLVSAKLALIEDELGRQAG----ADTPFVTEAANHIISAGGKRFRPLLVV 56

Query: 60  ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ ++++    AI+
Sbjct: 57  LCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSANLRWGNSVAIM 114

Query: 119 AGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            G+ L + A   ++      +K   R+   L        +G   GQ              
Sbjct: 115 VGDYLFSKASLAVAELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDP--------LAHY 166

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLADDL+D   
Sbjct: 167 LKVVADKTGSLIAASAVFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221


>gi|284802375|ref|YP_003414240.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578]
 gi|284057937|gb|ADB68878.1| hypothetical protein LM5578_2131 [Listeria monocytogenes 08-5578]
          Length = 321

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 60  APNADFDAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 172 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|88607961|ref|YP_506132.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600130|gb|ABD45598.1| polyprenyl synthetase family protein [Neorickettsia sennetsu str.
           Miyayama]
          Length = 321

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 18/227 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +   E  + ++ +L D +         ++  ++LS+       GK+IR+ L     +L
Sbjct: 7   LNASFSEKLRSVEEVLHDSMTTFTKLKSIEYAKKMLSS-------GKRIRALLSLLSFAL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +    +R  A IE IH  +L+HDD+  +D   IRRGKP +   +    +++ G+ L
Sbjct: 60  CKNADTNAEIRAAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNKISVLTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L+ AFEII   K      + S+    L+    LQ       L    E + E++   +   
Sbjct: 118 LSVAFEIILECKNLSVVLLLSKTAKQLSEGEMLQ-------LQSIGEIVSESEYLEVIAR 170

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KT  L   A E  AI+    Q     LR  G  +G+ FQ+ DD+LD 
Sbjct: 171 KTAVLFSAAAEIAAILTG-KQEYVVILREIGFLIGMAFQITDDVLDY 216


>gi|300770135|ref|ZP_07080014.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762611|gb|EFK59428.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 323

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 10/218 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL +  K I   L     +  + MQ+     L     Y +   GK++R   V   A L  
Sbjct: 3   KLNDIQKPIANELAAFEHKFKASMQSSVP-LLDRITHYIVKRKGKQMRPMFVFFSAGLCG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             + +  R  + +E +H  SL+HDD+  +DN   RRG  +V+  +    A++ G+ LL+ 
Sbjct: 62  SINESTFRGASLVELLHTASLVHDDV--VDNANERRGFFSVNALWKNKVAVLVGDFLLSK 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +     +   ++     ++S       +G L  Q+   +   I+E+  F + + KT 
Sbjct: 120 GLLL-----SVDNNDFHLLKIVSEAVEQMSEGELL-QIEKARKLDIEESVYFEVIRQKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +L+   C  GA      +   +++  FGE +GI FQ+ 
Sbjct: 174 SLIASCCACGAASTDVDEETVKKMHAFGEKVGIAFQIK 211


>gi|227494517|ref|ZP_03924833.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis
           DSM 15436]
 gi|226832251|gb|EEH64634.1| possible trans-hexaprenyltranstransferase [Actinomyces coleocanis
           DSM 15436]
          Length = 332

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 25/238 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
              L + L  + +R++    DLL ++ +      ++        +  GGK++R  LV  C
Sbjct: 5   QEQLEALLGADMERVE----DLLYKSVTGSGALVDEL---TSHLSNAGGKRMRPLLVLIC 57

Query: 62  ASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           A L + +       +    A+E  H  +L HDD+  MD+   RRG P    Q+    AI+
Sbjct: 58  AQLGSPSQVASQDVIDAATAVELTHLATLYHDDV--MDSAPQRRGVPAAQHQWGNNRAIL 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
           AG+ L   A  +++    +  D           H    + +  GQ+ +      D   V 
Sbjct: 116 AGDVLFARASRLVARLGQRTID----------YHAQTFERLCIGQLNETFGPETDFDPVE 165

Query: 179 MIQKM---KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              K+   KTG+L+  A   GA    A+    E +  +GE +G+ FQLADD++D   D
Sbjct: 166 FYIKVLSDKTGSLINTAAVFGAWHGGATDEVAEAVGVYGERIGVAFQLADDVIDLTSD 223


>gi|146338683|ref|YP_001203731.1| geranylgeranyl pyrophosphate synthetase [Bradyrhizobium sp. ORS278]
 gi|41018904|gb|AAR98495.1| geranyl geranyl synthase [Bradyrhizobium sp. ORS278]
 gi|146191489|emb|CAL75494.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           (Farnesyltranstransferase) [Bradyrhizobium sp. ORS278]
          Length = 289

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 14/228 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH 69
           +   RI+     L+   A   +     RL +A++ A+   G ++R  L    A+    + 
Sbjct: 2   DVMARIEK---SLVAAVALAGRPGCPPRLSAAMQAAVFPKGARVRPRLCHAVAAACGDDE 58

Query: 70  LTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             A     +AIE +HC SL+HDDLP  DN  +RRG+P+VH  + E  A++AG+ L+  AF
Sbjct: 59  PAATDAAGSAIELLHCASLVHDDLPCFDNAKLRRGRPSVHAAFGEPLAVLAGDALIVLAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           + ++  K++      ++L+ ++   +G+  G+  GQ  + +     E  +    + KTGA
Sbjct: 119 QTLA--KSRCSPLRLARLIETIGDAVGVPHGIAAGQAWECE----PEIDLSHYHRSKTGA 172

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L   A  SGA  A     + E  R  GE +G  +Q+ADD+ D   D  
Sbjct: 173 LFAAATISGAAAAG--HADPEAWRSLGEKIGEAYQVADDIRDAASDEE 218


>gi|32267223|ref|NP_861255.1| hypothetical protein HH1724 [Helicobacter hepaticus ATCC 51449]
 gi|32263276|gb|AAP78321.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 303

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 27/231 (11%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +Q   +RI   +   + +  +    +  + L   + Y    GK +RS L+   + +    
Sbjct: 3   IQFALERIKAYIHTYVQECKN----EEVNALYGHLSY----GKMLRSKLLLSISDM---- 50

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +  ALRV A IE I   SL+HDD+  +D    RRG P+++  +    AI+ G+ L + AF
Sbjct: 51  NEDALRVCALIEMIQSASLLHDDV--IDESLTRRGIPSINATFGNKNAIMLGDVLYSKAF 108

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             +S    +L  ++ S ++      I    +             D+ +   +   KT AL
Sbjct: 109 YELSCLDVRLAQSVSSAVVRLSVGEIEDVKL-------SLSFHTDKERYIRMCADKTAAL 161

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           +  A E GAI+   ++N     R +GENLGI FQ+ DD+LD  +D   L K
Sbjct: 162 IVAAAECGAILKGLNKNI---YRIYGENLGIAFQIIDDILDITQDSQTLGK 209


>gi|114570734|ref|YP_757414.1| trans-hexaprenyltranstransferase [Maricaulis maris MCS10]
 gi|114341196|gb|ABI66476.1| Trans-hexaprenyltranstransferase [Maricaulis maris MCS10]
          Length = 340

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 17/235 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
             L     ++ +R+D ++ + L          H + +    RY +  GGK++R  +    
Sbjct: 20  EALARLAHDDMRRVDALILERL--------DSHVELIPELARYLIEAGGKRVRPMITVAA 71

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A++   + +  L++ AA+E IH  +L+HDD+  +D   +RRGK   ++ +   ++++ G+
Sbjct: 72  ANMIGHSDIAPLKLAAAVEFIHTATLLHDDV--VDESGMRRGKAAANLVWGNASSVLVGD 129

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   +F ++    +     +R+  +LS   +   +G +  Q+  ++D  +       I 
Sbjct: 130 FLFARSFSLMVEAGS-----MRALGVLSDAASTIAEGEVR-QLSAVKDVGVSVETYMQII 183

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KT AL   A +   I+A    NE+  L  +G  LG+ FQL DD LD      K
Sbjct: 184 DAKTAALFAAAAQVSGIVADRPANEETALETYGRELGLAFQLVDDALDYSGASAK 238


>gi|255326766|ref|ZP_05367842.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia
           mucilaginosa ATCC 25296]
 gi|255295983|gb|EET75324.1| bifunctional short chain isoprenyl diphosphate synthase [Rothia
           mucilaginosa ATCC 25296]
          Length = 353

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 16/222 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +  RI+  L + + QT  H+    +  LLSA      GGK++R  L   CA++    +  
Sbjct: 41  SLARIEERLAEAIAQTD-HLADVASRHLLSA------GGKRVRPLLALLCAAVDGEINDE 93

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +     +E  H  +L HDD+  MD+   RRG  +  + +    AI+ G+ + + A  ++
Sbjct: 94  VIEAAVVVELTHLATLYHDDV--MDDAPKRRGVDSAQMIWGNSVAILTGDLIFSRASLLV 151

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           S   T      R   + S T    + G L       + + +       + + KTG+L+  
Sbjct: 152 SELGT------RPMKIQSQTFERLVLGQLFETTGPREGQDL-LDHYIAVIEGKTGSLIAA 204

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A E G++++ AS++    ++ +GE +G+ FQLADD++D   D
Sbjct: 205 AGEYGSLLSGASEDIISMVKAYGELVGVAFQLADDVIDIVSD 246


>gi|194741958|ref|XP_001953476.1| GF17201 [Drosophila ananassae]
 gi|190626513|gb|EDV42037.1| GF17201 [Drosophila ananassae]
          Length = 441

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 25/235 (10%)

Query: 19  ILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN---- 68
           ILDD L      ++           L +   Y   G GK +R  +    A   N +    
Sbjct: 121 ILDDELKYFYDDVRDLLQSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNKE 180

Query: 69  ----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    ++    E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L
Sbjct: 181 SHQLVHKQRQIALFSEMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYIL 238

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + A  +I+  ++     + SQ++  L     +      Q+   + E             K
Sbjct: 239 SVASIMIARLRSDDVTIVLSQILTDLVQGEFM------QLGSRETENERFAHYLTKTYRK 292

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T +L+  A ++ A++A A  N  E    +G N+G+ FQL DD+LD     E + K
Sbjct: 293 TASLIANALKATAVIAQAEDNVAELAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 347


>gi|90420152|ref|ZP_01228060.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335486|gb|EAS49236.1| polyprenyl synthetase family protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 337

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 11/215 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
             ++DL+L  A        +    A      GGK++R  L    A   +      +++ A
Sbjct: 28  ARVNDLILAMAGSNVELIPEI---AEHLISSGGKRLRPMLTIASALAHDYRGDAHVKLAA 84

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           ++E +H  +L+HDD+  +D   +RRGK T    +    +++ G+ LL  AF+ +    + 
Sbjct: 85  SVEFMHTATLLHDDV--VDESDLRRGKKTARTIWGNQASVLVGDFLLGQAFKTMVEVGS- 141

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               + +  +LS   ++  +G +  Q+   +     E     +   KT AL   A E G 
Sbjct: 142 ----LTALDILSTASSVIAEGEVW-QLSAAKHMTTSEADYLAVIDAKTAALFAAAAEVGP 196

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++A A + E+  +R +G +LG+ FQL DD+LD   
Sbjct: 197 VIAGAGEAERTAMRDYGRSLGLAFQLVDDVLDYGG 231


>gi|306817884|ref|ZP_07451623.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
           35239]
 gi|304649363|gb|EFM46649.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
           35239]
          Length = 339

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 27/236 (11%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L  KL E   R++  L +   +TA    T+    L +A      GGK++R  LV   +
Sbjct: 9   DALEEKLTEALSRVEARLVE-ETRTAQENTTEIVSHLRAA------GGKRMRPLLVLLIS 61

Query: 63  SLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            L N           +  G A+E  H  SL HDDL  MD+  +RRG    H++++   A+
Sbjct: 62  QLGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAV 119

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
           +AG+ +   A  I+S    +L             H    Q +  GQM DI      +   
Sbjct: 120 MAGDLIFARASLIVSDFGREL----------MKYHARTFQRLCLGQMHDILGPGATDDPI 169

Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                + + KTG+L+  A   GA ++  S      +  FGE+LG+ FQ+ADD+LD 
Sbjct: 170 DFYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDL 225


>gi|187736086|ref|YP_001878198.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426138|gb|ACD05417.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 336

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 19/230 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           +  +L++ S+ ++        + A +M+T    +           GK +R  LV   A  
Sbjct: 19  VKPELKQVSEFVEAQSSCFDPEVADYMETVCQSK-----------GKMLRPALVLLVAGA 67

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   +R+GA +E +H  SL+HDD+  +D    RR + T +  +    A++ G+ L 
Sbjct: 68  TGGIKPAHIRLGALLEMVHLASLVHDDV--IDEADKRRDEATANALWGNSLAVLLGDVLF 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           ++A  + +   +       +  + ++            Q   + D  +   + F I + K
Sbjct: 126 SHAMVLGTEFGSTEFCRRLANTVRNVCQGEVA------QSSRLYDLSMTREEYFEIIRKK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           T +L   A      ++  +   +E L   G+ LG+ +Q+ DD LD   D 
Sbjct: 180 TASLFSAATGGAGWISGVTPEVEESLYQLGDLLGVAYQIYDDCLDMVGDE 229


>gi|229490364|ref|ZP_04384205.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
           SK121]
 gi|229322654|gb|EEN88434.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
           SK121]
          Length = 379

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 100/246 (40%), Gaps = 34/246 (13%)

Query: 16  IDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-----ECASLFNV 67
            +  L D      +  S++   + + + +   + L GGK++R                  
Sbjct: 32  FEAALRDFFDSRRELVSNIGGGYEEAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGK 91

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------------- 111
           N    +R  AA+E +   +L+HDD+  +D    RRG PTVH+++                
Sbjct: 92  NADAVIRACAALELVQACALVHDDI--IDASTTRRGFPTVHVEFENQHRDEEWSGDSAHF 149

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
            E  AI+ G+  L +A ++I       +   R   + S         +LGGQ LDI +E 
Sbjct: 150 GEAVAILLGDLALAWADDMIRESGISPEAAARVSPVWSAMRT----EVLGGQFLDISNEA 205

Query: 172 IDETQVF---MIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             +  V     + + KT A  +      GA +  A     +  R FG ++GI FQL DDL
Sbjct: 206 RGDETVEAAMRVNRYKTAAYTIERPLHLGAALFGADAELVDAYRTFGTDIGIAFQLRDDL 265

Query: 228 LDCEED 233
           L    D
Sbjct: 266 LGVFGD 271


>gi|311739255|ref|ZP_07713092.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311305681|gb|EFQ81747.1| trans-hexaprenyltranstransferase [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 334

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 16/230 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69
           + ++RI   ++ +  +  S +    +         +  GGK+ R  +    +        
Sbjct: 17  QLNERIGAGMEAVEDKLRSEIDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGPRPGC 76

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              ++    +E +H  +L HDD+  MD    RRG  + + +++   AI+AG+ LL +A  
Sbjct: 77  EEVVKAATVVEMVHVATLYHDDV--MDEADRRRGVESANSRWNNSVAILAGDALLAHASR 134

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA 187
           ++S   T    +               + ++ GQM +     E         + + KT  
Sbjct: 135 LMSELDTHTVGH----------FADTFEELVTGQMRETIGAGEANAVEHYTAVIREKTAV 184

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           L+  A   GA  + AS      L   G  +G+IFQ+ DD++D   D PK+
Sbjct: 185 LIASAGYLGAYHSGASAEHAAALHRIGGAIGMIFQIVDDVIDIFSD-PKE 233


>gi|301166926|emb|CBW26505.1| putative octaprenyl-diphosphate synthase [Bacteriovorax marinus SJ]
          Length = 325

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 8/191 (4%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            L+GGK++R  L      L+ V+  T      +IE +H  SL HDD+  +DN   RRG  
Sbjct: 41  VLVGGKRLRPLLTYLVGHLYGVDFKTLDPYAKSIELVHAASLSHDDV--IDNATTRRGVA 98

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++IQ     A++AG+ LL+     +++          ++++  L     +      Q  
Sbjct: 99  SINIQASNKKAVLAGDYLLSDVIVNLTNAGNLELVGEMAKVIQDLAIGEWI------QAD 152

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            I+        +  I   KT ++M + C + AI+A  S++  E+ +  G +LGI FQL D
Sbjct: 153 AIETRDYTSELIEEIAIKKTASVMSWCCYAPAILAGLSRSTIEKSKQMGIDLGIAFQLMD 212

Query: 226 DLLDCEEDLPK 236
           D LD   +  K
Sbjct: 213 DTLDFSSESQK 223


>gi|148544308|ref|YP_001271678.1| polyprenyl synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153686|ref|YP_001842027.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112]
 gi|227365030|ref|ZP_03849068.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3]
 gi|325681657|ref|ZP_08161177.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A]
 gi|148531342|gb|ABQ83341.1| Polyprenyl synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225030|dbj|BAG25547.1| polyprenyl synthase [Lactobacillus reuteri JCM 1112]
 gi|227069942|gb|EEI08327.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri MM2-3]
 gi|324978969|gb|EGC15916.1| polyprenyl synthetase [Lactobacillus reuteri MM4-1A]
          Length = 326

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 12/223 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASL---FNVNHLT 71
           I+  L  +  QT +   T  N +L  A++  A  GGK +R       A++          
Sbjct: 12  INNALGKVN-QTINDRITIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTADEQEK 70

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +++ +++E +H  +LIHDD+  +D+   RRG  +V   + + TA+  G+ L T  F+++
Sbjct: 71  LIKIASSLEVLHMATLIHDDI--IDDSPKRRGAVSVQAAFGKDTAVYTGDFLFTIFFDLL 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
               T      R+    + T    L G L GQM +  D        +     KT A+   
Sbjct: 129 VETMTGSAYLTRN----ARTMRKILTGEL-GQMDNRFDLDQSLLDYYRNVNGKTAAIFSL 183

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           A E GA   HA        +  G+N+GI FQ+ DD+LD   D 
Sbjct: 184 AAEEGAYFGHADHRTINLAKRIGQNIGISFQILDDILDYSGDE 226


>gi|284047359|ref|YP_003397699.1| trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684]
 gi|283951580|gb|ADB54324.1| Trans-hexaprenyltranstransferase [Conexibacter woesei DSM 14684]
          Length = 323

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 18/219 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +R++  L + L      +  +H    ++A      GGK++R  LV   A          +
Sbjct: 23  ERVEQRLTE-LTAGHGQLLAEHAGTTIAA------GGKRLRPLLVLLAAGESAAPTDRLI 75

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R   A+E IH  SL+HDD+  +D   +RRG+PTV        A   G+ L + AF  +++
Sbjct: 76  RSAVAVELIHSASLVHDDV--LDRAPVRRGRPTVFAAAGRTVATATGDLLFSRAFAELAA 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  ++R+    S     G       Q  D  D  +   +     ++KTGAL   AC
Sbjct: 134 SGE--AADVRALSGASSALAAGELM----QRADAWDVGVSLDRYLERCELKTGALFEAAC 187

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             GA+         E L  FG  +G+ FQL DD+LD   
Sbjct: 188 RLGALATAGPD---EALAAFGRRIGLAFQLLDDVLDVSG 223


>gi|191638624|ref|YP_001987790.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23]
 gi|190712926|emb|CAQ66932.1| Farnesyl-diphosphate synthase [Lactobacillus casei BL23]
          Length = 280

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 17/234 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L      ++  LD+ L   A       N  L +A+ Y++  GGK++R  L+    ++++ 
Sbjct: 2   LAGWRTAVEQTLDEQLAAVA-------NPHLRAAMVYSVEAGGKRLRPLLLLSVVAMYDG 54

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               AL   AA+E +H YSLIHDDLP+MD+  +RRGKPT H Q+ E  AI+AG+ LLT A
Sbjct: 55  VIADALPAAAALEYVHTYSLIHDDLPAMDDDDLRRGKPTNHKQFGEALAILAGDALLTDA 114

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMIQKMKT 185
           F I+S    +      +  +  L    G  GM+GGQ   +D ++E      +  + + KT
Sbjct: 115 FAILSRQYREKG----AACVQILAEAAGSNGMVGGQVLDMDGENEQYHLETLKRMHEAKT 170

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           GAL+  A   G +     + ++  L  F    G+ FQ+ DD+ D      +L K
Sbjct: 171 GALIQAAIAMGGLFVTIPETDQTALADFSAAFGLGFQIKDDINDVTKTTAELGK 224


>gi|292659826|pdb|3M0G|A Chain A, Crystal Structure Of Putative Farnesyl Diphosphate
           Synthase From Rhodobacter Capsulatus
 gi|292659827|pdb|3M0G|B Chain B, Crystal Structure Of Putative Farnesyl Diphosphate
           Synthase From Rhodobacter Capsulatus
          Length = 297

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 15/233 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L  +L+E    ++T         A+ +       L  A  YA  GGK++R+FL  E A+
Sbjct: 2   SLSERLKEVQDAVETA-------XAAAIGRLPAGDLRDAXAYAAQGGKRLRAFLAIESAA 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           +  ++   A     A+E +H YSL+HDD P  DN  +RRG PTVH ++D+ TA++AG+ L
Sbjct: 55  IHGISXAQAXPAALAVEALHAYSLVHDDXPCXDNDDLRRGLPTVHKKWDDATAVLAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179
            T AFE+ + P     +N R  L+ +L    G +G + GQ LDI  E     +   ++  
Sbjct: 115 QTLAFELCTDPVLGSAEN-RVALVAALAQASGAEGXVYGQALDIAAETAAVPLTLDEIIR 173

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q  KTGAL+ FA ++GAI+A A    +  L  +   LG+ FQ+ADD+LD E 
Sbjct: 174 LQAGKTGALISFAAQAGAILAGAD---RGPLTAYATALGLAFQIADDILDVEG 223


>gi|289580127|ref|YP_003478593.1| dimethylallyltranstransferase [Natrialba magadii ATCC 43099]
 gi|289529680|gb|ADD04031.1| Dimethylallyltranstransferase [Natrialba magadii ATCC 43099]
          Length = 349

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 33/245 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL- 64
             ++   + ++  + +        +  Q  +RL  A RY L  GGK++R  ++   A   
Sbjct: 13  EAVRARRELVNEAIPE-------ELPVQQPERLYEASRYLLDAGGKRLRPAVLLAAAEAL 65

Query: 65  ---------------FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                           +   +  +    ++E I  ++LIH     MD+  +RRG P VH 
Sbjct: 66  ADVEPLSTDYRSFPTLSGEEIDMMDAAVSVEVIQSFTLIH--DDIMDDDDLRRGVPAVHR 123

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +YD  TAI+AG+ L + AFEI+          + +  +L+ T       +  GQ LD+  
Sbjct: 124 EYDLETAILAGDTLYSKAFEIMLETGADPSRMVDALDVLATT----CTKICEGQALDVTF 179

Query: 170 EFID---ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E  D     +   + + KT  L   +    AI+  A Q   + L  +G ++G  FQ+ DD
Sbjct: 180 EKRDNVAPEEYLEMVEQKTAVLYAASACLPAILQGADQETIDALYGYGLDIGRAFQIQDD 239

Query: 227 LLDCE 231
           +LD  
Sbjct: 240 VLDLT 244


>gi|307595875|ref|YP_003902192.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551076|gb|ADN51141.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 343

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 18/230 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++  Q   ++  + ++    A+ Y +  GGK++R  +    A     ++  AL   A +E
Sbjct: 14  EIDEQLIKYLSKEVSEEFRDAVIYQVSTGGKRLRPLITLTAARACGGDYRVALPAAAIVE 73

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH YSLI+DD+  +D   +RR KPTV  +Y +  AI+ G        E I   +  +  
Sbjct: 74  LIHNYSLIYDDI--IDEALLRRNKPTVRAKYGDYAAILIGIWYREAIEEAILETRDPIAF 131

Query: 141 NIRS----QLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----------QVFMIQKMKTG 186
              +    + +        L    G +     +  +                 +  +KT 
Sbjct: 132 ARETANTIRAIDEGERLDILLEYAGRRDPYFVENRLGPRLLSNWEALYNTYVKMISLKTA 191

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AL+  A   GA+ A+A  +  + L  +G  LG+ FQ+ DD+LD   D+ K
Sbjct: 192 ALIRTAAVFGAMSANA-PHCIKPLSDYGTYLGLAFQVLDDILDIFGDVKK 240


>gi|227874599|ref|ZP_03992762.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
           35243]
 gi|227844808|gb|EEJ54954.1| possible trans-hexaprenyltranstransferase [Mobiluncus mulieris ATCC
           35243]
          Length = 339

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 27/236 (11%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L  KL E   R++  L +   +TA+   T+    L +A      GGK++R  LV   +
Sbjct: 9   DALEEKLTEALSRVEARLVE-ETRTAAENTTEIVSHLRAA------GGKRMRPLLVLLIS 61

Query: 63  SLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            L N           +  G A+E  H  SL HDDL  MD+  +RRG    H++++   A+
Sbjct: 62  QLGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAV 119

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
           +AG+ +   A  I+S    +L             H    Q +  GQM DI      +   
Sbjct: 120 MAGDLIFARASLIVSDFGREL----------MKYHARTFQRLCLGQMHDILGPGATDDPI 169

Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                + + KTG+L+  A   GA ++  S      +  FGE+LG+ FQ+ADD+LD 
Sbjct: 170 DFYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDL 225


>gi|297570910|ref|YP_003696684.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931257|gb|ADH92065.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 338

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 23/236 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L  +L      ++  L  L +Q    +  +    L  A      GGK++R  L    
Sbjct: 12  SANLVEELTSRMGEVEAQL-RLAVQVDDLVVDEATSHLAKA------GGKRLRPALCLLT 64

Query: 62  ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L         L     +E  H  +L HDD+  MD   +RRG P+    Y   +AI+AG
Sbjct: 65  AQLGPRPASPDVLDSAVVVELTHLATLYHDDV--MDEAPLRRGVPSAQYVYGNSSAILAG 122

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QV 177
           + L   A  I++    +            L H    + +  GQ+ +       E      
Sbjct: 123 DVLFARASGIVAKLGPEAV----------LLHAETFERLCMGQLHETIGPREGEDPIQHH 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG+L+  +   G + +       E +  FG+ +G+ FQ+ADD++D   D
Sbjct: 173 IQVLADKTGSLIAASGRYGVLYSGGDPALAEEIAQFGDKVGVAFQIADDVIDLVSD 228


>gi|255535323|ref|YP_003095694.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341519|gb|ACU07632.1| Octaprenyl-diphosphate synthase [Flavobacteriaceae bacterium
           3519-10]
          Length = 325

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 10/209 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAI-RYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L +   +   Q N  LL  + R+ +   GK++R   V  CA L         R  + IE 
Sbjct: 18  LFEQKFYESMQSNVPLLDKVTRFIVTTKGKQMRPMFVFLCAKLVGSVTDKTFRGASMIEL 77

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  +L+HDD+  +D  + RR   +++  +    A++ G+ LL+ A  + +  K      
Sbjct: 78  IHTATLVHDDV--VDESFKRRNFFSINALWKNKIAVLVGDYLLSKAVLLSTDHKDYDLLA 135

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           + S+ +  +     L      Q+   +   I E   + I + KT  L+   CE G     
Sbjct: 136 VISRTIREMAEGELL------QLEKARKLDITEEVYYEIIRQKTATLIAACCEIGVRSNS 189

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +    ++  FG   G+ FQ+ DDL D 
Sbjct: 190 DDEVLAAKMMEFGTLTGMAFQIKDDLFDY 218


>gi|284995517|ref|YP_003417285.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923]
 gi|284060984|gb|ADB71923.1| hypothetical protein LM5923_2082 [Listeria monocytogenes 08-5923]
          Length = 321

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L  N 
Sbjct: 10  MQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLAPNA 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L   +
Sbjct: 64  DFDAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKS 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++  K     ++ +  MLS        G +  Q+ D  +            K KT  
Sbjct: 122 LEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKRKTAL 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 176 LIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|254508603|ref|ZP_05120719.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16]
 gi|219548454|gb|EED25463.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus 16]
          Length = 260

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 8/159 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             A IE IH  +L+HDD+  +D   +RRGK T +  +    +++ G+ + T +F++++  
Sbjct: 6   AAAFIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRSFQMMTEL 63

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            +     ++   ++S   N+  +G +  Q+++  D    E     +   KT  L   A +
Sbjct: 64  GS-----MKILKLMSDAVNVIAEGEV-QQLMNCNDPDTTEEIYMDVIYSKTARLFEAATQ 117

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            GAI+  A ++ +  L+ +G+ LG  FQL DD++D   D
Sbjct: 118 IGAILNDAPEDVETALQNYGKYLGTAFQLIDDVMDYTSD 156


>gi|307701352|ref|ZP_07638373.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
 gi|307613513|gb|EFN92761.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
          Length = 339

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 27/236 (11%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L  KL E  +R++  L +   +TA+   T+    L +A      GGK++R  LV   +
Sbjct: 9   DALEEKLTEALERVEARLVE-ETRTAAENTTEIVSHLRAA------GGKRMRPLLVLLIS 61

Query: 63  SLF--NVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            L     +       +  G A+E  H  SL HDDL  MD+  +RRG    H++++   A+
Sbjct: 62  QLGKAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAV 119

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
           +AG+ +   A  I+S    +L  +          H    Q +  GQM DI      +   
Sbjct: 120 MAGDLIFARASLIVSDFGRKLMKH----------HARTFQRLCLGQMHDILGPGATDDPI 169

Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                + + KTG+L+  A   GA ++  S      +  FGE+LG+ FQ+ADD+LD 
Sbjct: 170 DFYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDL 225


>gi|254552488|ref|ZP_05142935.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
          Length = 247

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 14/225 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 4   RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 59

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++ 
Sbjct: 60  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTG 117

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 118 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 172

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             C  GA++A+A       L  FG  LG+ FQ  DDL+    D  
Sbjct: 173 CCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 217


>gi|19704873|ref|NP_602368.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296328953|ref|ZP_06871461.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|19712760|gb|AAL93667.1| Heptaprenyl diphosphate synthase component II [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296153942|gb|EFG94752.1| heptaprenyl diphosphate synthase component II [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 326

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 19/235 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--- 65
           L+E  +R+   +   L+   S  ++Q    L   +  +   GK +RS L+  CA L    
Sbjct: 6   LKEWIERVKYYI--HLIADYSIKESQVGAVLDDVLNLS---GKMLRSKLLLLCAFLGTNW 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             N     ++ A +E  H  SLIHDD+  +D+   RRGK ++  +Y +  A+ AG+ L+ 
Sbjct: 61  KNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGKVSIQGKYGKDAAVFAGDFLIA 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F         +++   +  +LS T      G +  Q L    E I E + F   + KT
Sbjct: 119 RIF-----YYGAVENLNEAVSILSKTVEYMCIGEIE-QDLCRYQENISEKKYFENIERKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
            AL   A   GA  A  S+   ++L  F +NLG++FQL DD+LD      +L K+
Sbjct: 173 AALFQAASYIGAKEAGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNSKELGKE 227


>gi|289704598|ref|ZP_06501030.1| polyprenyl synthetase [Micrococcus luteus SK58]
 gi|289558678|gb|EFD51937.1| polyprenyl synthetase [Micrococcus luteus SK58]
          Length = 354

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 39/244 (15%)

Query: 7   SKLQENSKRIDTIL--DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + L++  +++D  L  DDL   TA+H        LL+A      GGK++R  L    + L
Sbjct: 29  TALEQVEEQLDGALGFDDLFSDTAAH-------HLLAA------GGKRVRPVLTVLASLL 75

Query: 65  FNVN---------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            +              A +    +E  H  +L HDD+  MD   +RRG P  H  +    
Sbjct: 76  GDPALASGEVADVDAPARQAAVVMELTHLATLYHDDV--MDEAPVRRGAPAAHRLWGNSA 133

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---I 172
           AI+AG+ +   A ++++    +                   + ++ GQ+ + +       
Sbjct: 134 AILAGDLIFARASQLMAELGPRPV----------QIQADTFERLVQGQLWETRGPAEGAD 183

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                + +   KTG+L+  A   GA++  A +   + +  +GE +G+ FQLADDL+D   
Sbjct: 184 PIEHYYAVLSGKTGSLIAAAGMLGALLGGADEAAVQVMSAYGEKVGLAFQLADDLIDLTG 243

Query: 233 DLPK 236
           D  +
Sbjct: 244 DAER 247


>gi|256378414|ref|YP_003102074.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255922717|gb|ACU38228.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 557

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 7/216 (3%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L +       +  D +L   RYALL  GK +R  L+   A     +    +    A+E +
Sbjct: 242 LREALRAQWPETGDPVLDISRYALLTPGKMLRPLLLASAAGAVGGDVERVVPAALAVEYL 301

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+HDD+  +D+  +RRG+P+V  ++    AI+ G+ L+   F  +++         
Sbjct: 302 HVGSLVHDDV--IDDDEVRRGQPSVQHRFGVPEAIVVGDALIFKTFSAVAACVELGVTAE 359

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            +        + G+  +  GQ L+     D          +  +KTGAL   AC +GA++
Sbjct: 360 AALGAARAIADAGVD-VCRGQALEGALAADPTHPLGDYVTVMALKTGALFRGACRAGALL 418

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                   E +  + E+LG+ FQ+ DDLL    D  
Sbjct: 419 GGGGPEAVEAVTSYAEHLGLAFQVHDDLLPYLSDSA 454


>gi|257052502|ref|YP_003130335.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691265|gb|ACV11602.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
          Length = 280

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 19/230 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
             L+     I+T L+D+L        +   + +       L GGK++R  +         
Sbjct: 2   EYLERRRDLIETRLEDVLASVDPAELSSELENV------VLAGGKRVRPTVSLLVCEAVG 55

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+     +E +H  SL+ DD+  +D    RR  P+    +    A+IA +GL+  
Sbjct: 56  AEPEDAVDFAVGVELVHNASLVVDDI--IDESDRRRDSPSAWSAFGHGPALIASDGLIGE 113

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF + S+ +  ++             +  +  +  G+  ++      E     + + KTG
Sbjct: 114 AFALFSTDERAMR-----------AVSEAMVELGEGEATELAAMPDSEDAYRQLARRKTG 162

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           AL   A E GAI A A     E    + E +GI FQ+ DD+LD   D  +
Sbjct: 163 ALFRAAAELGAIAADADARTVEAFGQYAEQVGIAFQIRDDVLDATGDAEQ 212


>gi|169631007|ref|YP_001704656.1| polyprenyl-diphosphate synthase GrcC1 [Mycobacterium abscessus ATCC
           19977]
 gi|169242974|emb|CAM64002.1| Probable polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
           abscessus]
          Length = 328

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 25/233 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
             +K++++   I+T++   L         Q +  L  ++ +    GGK+ R       A 
Sbjct: 11  FAAKVRDHLAAIETLIVSEL--------GQSDPLLTESVLHLFHAGGKRFRPLFTVLAAQ 62

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + ++   +  GA  E IH  +L HDD+  MD    RRG P+ + ++    AI+AG+ 
Sbjct: 63  TGPDPDNDEVILAGAVCELIHLATLYHDDV--MDEAQKRRGVPSANARWGNNVAILAGDY 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQ-VFM 179
           LL  A  ++S         +                ++ GQM +     E  DET+    
Sbjct: 121 LLATASRLVSRLGPTAVRIV----------AETFAELVTGQMRETVGVPEGGDETEHYLK 170

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KTG+L+  A   GA+ +    ++ ERL   G  +G  FQ++DD++D E 
Sbjct: 171 VIHEKTGSLIAAAGRFGAMTSRCDDDQIERLSRLGAIVGTAFQISDDIIDIES 223


>gi|118404002|ref|NP_001072229.1| prenyl (decaprenyl) diphosphate synthase, subunit 1 [Xenopus
           (Silurana) tropicalis]
 gi|110645682|gb|AAI18814.1| trans-prenyltransferase [Xenopus (Silurana) tropicalis]
          Length = 292

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 16/196 (8%)

Query: 45  YALLG-GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMD 96
           Y   G GK  R  LV   A   N++       H +   +    E IH  SL+HDD+  +D
Sbjct: 4   YYFDGKGKAFRPMLVVLMARACNIHYNNCREVHPSQRTIAEISEMIHTASLVHDDV--ID 61

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRGK TV   + E  A++AG+ +L+ A   ++         + SQ+ + L     L
Sbjct: 62  GSDSRRGKQTVSGIWGERKAVLAGDLMLSVAAVAMARIGNTTVIALISQIAIDLVRGEFL 121

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
                 Q+   ++E    +        KT +L+  +C++ +++A       E    +G+N
Sbjct: 122 ------QLGSKENENERFSHYIEKTFKKTASLIANSCKAVSVLACPDPAVHEIAYQYGKN 175

Query: 217 LGIIFQLADDLLDCEE 232
           +GI FQL DD+LD   
Sbjct: 176 IGIAFQLIDDVLDFTS 191


>gi|259502679|ref|ZP_05745581.1| polyprenyl synthetase [Lactobacillus antri DSM 16041]
 gi|259169324|gb|EEW53819.1| polyprenyl synthetase [Lactobacillus antri DSM 16041]
          Length = 288

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 10/187 (5%)

Query: 49  GGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK +R  L+   + +F   + +    +++ A+IE +H  +LIHDD+  +D+   RRG  
Sbjct: 5   GGKYLRPALLLLVSRMFTTDSQDDERLVKLAASIEVLHMATLIHDDI--IDDSPERRGAV 62

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           ++  ++ + TA+ AG+ L T  F+++               + +      L G L GQM 
Sbjct: 63  SIQARFGKDTAVYAGDLLFTIFFDLLLEAIPSSA----YLRVNAQAMRQILDGEL-GQMG 117

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              +            K KT AL   A + GA  A  + ++      FG+ LGI FQ+ D
Sbjct: 118 QRFNLQQTLADYLANVKGKTAALFKLAAQEGAHFAGGTADQVASAAAFGQQLGIAFQMLD 177

Query: 226 DLLDCEE 232
           D+LD   
Sbjct: 178 DILDYTG 184


>gi|228470958|ref|ZP_04055803.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3]
 gi|228307355|gb|EEK16369.1| octaprenyl-diphosphate synthase [Porphyromonas uenonis 60-3]
          Length = 318

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 19/232 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           + +  K  + +    L   AS +         S+       GK +R  +V  CA L    
Sbjct: 4   IADFIKEFEQVFKRSLQSDASVLSHALEHLQHSS-------GKHVRPIIVGLCAQLCAGQ 56

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            +   L     IE +H  SLIHDD+  +D    RRG+PT++  Y    A++ G+ +L+ A
Sbjct: 57  TNERTLAAALVIELLHTASLIHDDV--IDWSDTRRGQPTLNALYSNHQAVLMGDYVLSTA 114

Query: 128 F-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           F EI+S    Q    + +Q   +L+    +      Q+   +     E   + +   KTG
Sbjct: 115 FLEIVSREHNQEMLRVVAQAGRNLSIGELM------QLSLSKAHTYREEDYYAVVDRKTG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
            L   + + GA+  +A+  E ER    G+ +G  FQL DDL D +  +D+ K
Sbjct: 169 TLFEASAKLGALSVNATDEEVERCARLGQLMGRAFQLQDDLFDYDKLQDVGK 220


>gi|227533817|ref|ZP_03963866.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227188547|gb|EEI68614.1| possible trans-hexaprenyltranstransferase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 312

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 8/212 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           + + Q   H+      ++ + I+  +  GGK +RS L+   A L N ++   +  GAAIE
Sbjct: 7   EQIQQRLEHVAVLREPQVHALIQQQINAGGKMLRSGLMLMLARLGNPDNDDLITAGAAIE 66

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  +L+HDD+  +D+  +RRG  TV  +     AI AG+ L    F+++S       D
Sbjct: 67  ALHLATLVHDDV--LDHADLRRGSDTVSAKSGNREAIYAGDFLFAIYFQLLSEQNPATTD 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
              +  ++         G +  Q           ++       KT AL   A  +GA + 
Sbjct: 125 LATNARVMKH----IFMGEV-DQNGPSAPLIPSVSEYLKAIAGKTAALFALATYTGATIG 179

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                EK+    FG  LG+ FQ+ DDLLD  +
Sbjct: 180 QLDFTEKKAAYRFGRQLGMAFQMIDDLLDYTQ 211


>gi|269977600|ref|ZP_06184567.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus
           mulieris 28-1]
 gi|269934203|gb|EEZ90770.1| bifunctional short chain isoprenyl diphosphate synthase [Mobiluncus
           mulieris 28-1]
          Length = 339

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 27/236 (11%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L  KL E   R++  L +   +TA+   T+    L +A      GGK++R  LV   +
Sbjct: 9   DALEKKLTEALSRVEARLVE-ETRTAAENTTEIVSHLRAA------GGKRMRPLLVLLIS 61

Query: 63  SLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            L N           +  G A+E  H  SL HDDL  MD+  +RRG    H++++   A+
Sbjct: 62  QLGNAGGDAPISEDLIAAGVAVELTHLASLYHDDL--MDDATVRRGVTAAHVKWNNTLAV 119

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
           +AG+ +   A  I+S    +L             H    Q +  GQM DI      +   
Sbjct: 120 MAGDLIFARASLIVSDFGREL----------MKYHARTFQRLCLGQMHDILGPGATDDPI 169

Query: 176 -QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                + + KTG+L+  A   GA ++  S      +  FGE+LG+ FQ+ADD+LD 
Sbjct: 170 DFYLHVLREKTGSLIGTAALYGAALSGCSPEICTAVTAFGEDLGVAFQIADDVLDL 225


>gi|71897572|ref|ZP_00679817.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
 gi|71732475|gb|EAO34528.1| Trans-hexaprenyltranstransferase [Xylella fastidiosa Ann-1]
          Length = 333

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 15/228 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + S    +   IDT++ D L      +    +  + S       GGK++R  L       
Sbjct: 17  IQSFAASDMAAIDTLIHDRLTSDIVLINQIADHIICS-------GGKRLRPMLTMLAGHA 69

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    ++ A IE IH  +L+HDD+  +D   +RR   T +  +    +++ G+ L 
Sbjct: 70  IGHTGPHHHQLAAIIEFIHTATLLHDDV--VDGSELRRSSSTANALWGNAPSVLVGDFLY 127

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + +F++++        N+    +L+ T N   +G +  Q+L + +   DET    + + K
Sbjct: 128 SRSFQLMTEL-----ANLEVMQILAETTNRISEGEVL-QLLHVHNPDTDETTYLSVIERK 181

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   A + GA+ +HA    + R+  +G  LG  FQ+ DD+LD   
Sbjct: 182 TAILFAAAAQLGALASHADTQTQTRMYEYGMQLGYAFQITDDVLDYTA 229


>gi|290975757|ref|XP_002670608.1| predicted protein [Naegleria gruberi]
 gi|284084169|gb|EFC37864.1| predicted protein [Naegleria gruberi]
          Length = 437

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 25/236 (10%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL--- 70
           ++D  L  +  +    +++ H   L +A +Y     GK  R  LV       N       
Sbjct: 117 QVDGDLKLIGEEILDSVKSDHPV-LDAAAKYFFNTPGKLFRPMLVLMTGRAVNEQTEISD 175

Query: 71  ------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    ++    E IH  SLIHDD+  +D+   RRG P ++       A++AG+ LL
Sbjct: 176 LETIMRKQRKLAETTELIHVASLIHDDI--VDDADTRRGIPALNKNVGNKVAVLAGDFLL 233

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A   ++        ++ S ++  L +   LQ    G+        +D          K
Sbjct: 234 GRASINLARIGNIESIDLISTVIEHLAYGEVLQMAGKGK--------LDFDYYMKTIFFK 285

Query: 185 TGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           T +L+  +C++ A+++ ++     +    FG+++GI +QL DD LD  +   DL K
Sbjct: 286 TSSLIANSCKASAVLSGSTNRELIDAAYTFGKHVGIAYQLTDDSLDFTQSQNDLGK 341


>gi|315654711|ref|ZP_07907617.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333]
 gi|315491175|gb|EFU80794.1| trans-hexaprenyltranstransferase [Mobiluncus curtisii ATCC 51333]
          Length = 350

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 18/224 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---T 71
           ++   LDD+        QTQ              GGK++R  L    + L   +      
Sbjct: 27  KLRDALDDIEQMLVQETQTQREKTSALVSHLRAAGGKRMRPLLTLLVSQLGAPDQPVSSQ 86

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             +   A+E  H  SL HDDL  MD   +RRG P  H+Q++   A++AG+ + + A  ++
Sbjct: 87  VKQGAVAVELTHLASLYHDDL--MDEATMRRGVPAAHVQWNNTLAVMAGDLIFSRASLLV 144

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ---KMKTGAL 188
           S     +             H+   + +  GQM DI      +  +       + KTGAL
Sbjct: 145 SGLNPTIVAQ----------HSRTFERLCQGQMRDIFGPDSHDDPIEFYIDVLRDKTGAL 194

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  A   GA ++         +  FGE+LG+ FQ+ADD+LD + 
Sbjct: 195 IGCAALYGAELSGCDAATVSAVTQFGEDLGVAFQIADDVLDLQA 238


>gi|118593444|ref|ZP_01550824.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata
           IAM 12614]
 gi|118433923|gb|EAV40581.1| putative octaprenyl-diphosphate synthase protein [Stappia aggregata
           IAM 12614]
          Length = 338

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L   CA +F       + + A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 57  GGKRLRPMLTLACADMFGYQGDGHVTLAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 114

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +LS    +  +G +  Q+   +
Sbjct: 115 KLWGNQASVLVGDYLLGQAFKMMVDVGS-----LEALRILSTASAVIAEGEVL-QLGAAK 168

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G ++A  S   K   R +G  LG  FQL DD L
Sbjct: 169 NIATTEADYLRVIEAKTAALFAAAAEVGPVIAGQSAEMKRAARTYGMELGYAFQLVDDAL 228

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 229 DYGGSSADLGK 239


>gi|315081026|gb|EFT53002.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1]
          Length = 324

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 17/235 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+    S+  +       +++D L + A          +  A  + +  GGK+ R  LV 
Sbjct: 1   MSYSASSEFTDLVSAKLALIEDELGRQAG----ADTPFVTEAANHIISAGGKRFRPLLVV 56

Query: 60  ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ ++++    AI+
Sbjct: 57  LCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSANLRWGNSVAIM 114

Query: 119 AGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            G+ L + A   ++      +K   R+   L        +G   GQ              
Sbjct: 115 VGDYLFSKASLAVAELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDP--------LAHY 166

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLADDL+D   
Sbjct: 167 LKVVADKTGSLIAASAIFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221


>gi|289435279|ref|YP_003465151.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171523|emb|CBH28067.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 321

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  FN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 60  VPTADFEMVRDASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSNVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G I++  S+++ E+L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 172 KTALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|171184649|ref|YP_001793568.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170933861|gb|ACB39122.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 334

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 17/235 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
           ++    ++  L+  L                  + Y +  GGK++R  L    A   +  
Sbjct: 9   KKYGAAVEKALERYL-------SIDLAPDFREEVLYQVKTGGKRLRPLLTLATAEAVSGR 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A+   A +E IH YSLI+DD+  +D G +RRG PTV   + +  AI+ G        
Sbjct: 62  WEPAVPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILIGIWYREAIE 119

Query: 129 E-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------QMLDIQDEFIDETQVFMIQ 181
           E ++ +PK        ++++ ++     L  +           +  +   +       + 
Sbjct: 120 EAVLDTPKPLAFAKEVAKVIKAIDEGERLDILFEYAGREDPYFIKARKAEVTLEDYIHMV 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +KTGAL+  A + GA+         E    FG   G+ FQ+ DD+LD   D  K
Sbjct: 180 SLKTGALIAAAAKWGAMSVSDDGKLAEEAWNFGLKAGVAFQIIDDVLDIYGDPKK 234


>gi|313819453|gb|EFS57167.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2]
          Length = 324

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 17/235 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M+    S+  +       +++D L + A          +  A  + +  GGK+ R  LV 
Sbjct: 1   MSYSASSEFTDLVSAKLALIEDELGRQAG----ADTPFVTEAANHIISAGGKRFRPLLVV 56

Query: 60  ECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            C+   + VN    +R    +E  H  SL HDD+  MD    RRG P+ ++++    AI+
Sbjct: 57  LCSQFGDAVNDADLVRAAVVMELTHVASLYHDDV--MDEASRRRGAPSANLRWGNSVAIM 114

Query: 119 AGNGLLTYAFEIISSPKTQ-LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            G+ L + A   ++      +K   R+   L        +G   GQ              
Sbjct: 115 VGDYLFSKASLAVAELGVDFVKLQARTFSRLVQGQIAETRGPSQGQDP--------LAHY 166

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTG+L+  +   GA+++HAS      L  FGE++G +FQLADDL+D   
Sbjct: 167 LKVVADKTGSLIAASAIFGAMVSHASAENVAALEQFGEDIGEVFQLADDLIDITS 221


>gi|329937106|ref|ZP_08286735.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045]
 gi|329303713|gb|EGG47598.1| polyprenyl synthatase [Streptomyces griseoaurantiacus M045]
          Length = 357

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 66  GGKAVRPALALLSAQAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 123

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 124 KVHGPAQAILVGDALFALAGEVLLELGTVEAG--RAARRLTSATRALIDGQAQDISYEHR 181

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  +   +   ++  KTGAL+  AC  GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 182 DR-VSVEECLEMEGNKTGALLACACSIGAVLGGADDEVADTLETYGHHLGLAFQAVDDLL 240

Query: 229 DCEED 233
               D
Sbjct: 241 GIWGD 245


>gi|194467708|ref|ZP_03073695.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
 gi|194454744|gb|EDX43641.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
          Length = 326

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 12/223 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASL---FNVNHLT 71
           I+  L  +  QT +   T  N +L  A++  A  GGK +R       A++          
Sbjct: 12  INNALGKVN-QTINDRITIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTAAEQEK 70

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +++ +++E +H  +LIHDD+  +D+   RRG  +V   + + TA+  G+ L T  F+++
Sbjct: 71  LIKIASSLEVLHMATLIHDDI--IDDSPKRRGAVSVQAAFGKDTAVYTGDFLFTIFFDLL 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
               T      R+    + T    L G L GQM +  D        +     KT A+   
Sbjct: 129 VETMTGSPYLTRN----ARTMRKILTGEL-GQMDNRFDLDQSLLDYYRNVNGKTAAIFSL 183

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           A E GA   H  +      +  G+N+GI FQ+ DD+LD   D 
Sbjct: 184 AAEEGAYFGHGDRRTINLAKRIGQNIGISFQILDDILDYSGDE 226


>gi|313623140|gb|EFR93406.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL
           J1-023]
          Length = 321

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L  N 
Sbjct: 10  MQKDIDLVEKELKKALTGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLSPNA 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +       G AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L   +
Sbjct: 64  DFEAVKNAGVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKS 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++  K     ++ +  MLS        G +  Q+ D  +            K KT  
Sbjct: 122 LEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKRKTAL 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 176 LIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|195505401|ref|XP_002099488.1| GE23324 [Drosophila yakuba]
 gi|194185589|gb|EDW99200.1| GE23324 [Drosophila yakuba]
          Length = 470

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCY 85
               L +   Y   G GK +R  +    A   N +             ++    E +H  
Sbjct: 171 SQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSA 230

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++     + SQ
Sbjct: 231 SLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQ 288

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++  L     +      Q+   + E             KT +L+  A ++ A++A A  N
Sbjct: 289 ILTDLVQGEFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 342

Query: 206 EKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             E    +G N+G+ FQL DD+LD     E + K
Sbjct: 343 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 376


>gi|195158222|ref|XP_002019991.1| GL13744 [Drosophila persimilis]
 gi|194116760|gb|EDW38803.1| GL13744 [Drosophila persimilis]
          Length = 445

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 25/235 (10%)

Query: 19  ILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN---- 68
           ILDD L      ++           L +   Y   G GK +R  +    A   N +    
Sbjct: 125 ILDDELKYFYDDVRDLLQSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 184

Query: 69  ----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    +V    E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L
Sbjct: 185 SHQLVHKQRQVALFSEMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYIL 242

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + A  +I+  ++     + SQ++  L     +      Q+   + E             K
Sbjct: 243 SIASIMIARLRSDDVTIVLSQILTDLVQGEFM------QLGSRETENERFAHYLTKTYRK 296

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T +L+  A ++ A++A A  N  E    +G N+G+ FQL DD+LD     E + K
Sbjct: 297 TASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 351


>gi|255624003|ref|XP_002540427.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223495850|gb|EEF21956.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 263

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 8/168 (4%)

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +   IE IH  +L+HDD+  +D   +RRG+ T + ++    +++ G+ L + AF
Sbjct: 35  RQEHITLAGIIEFIHTATLLHDDV--VDISSLRRGRATANAKWGNAPSVLVGDFLYSRAF 92

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +++    +     +    +++ T N   +G +  Q+    D   DE   F + + KT  L
Sbjct: 93  QLLVELGS-----MPLMSLMADTTNTIAEGEVL-QLTKAGDPATDEEAYFSVIESKTAVL 146

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              A E  AI++ AS  +  R R +G NLG  FQLADD+LD   D  K
Sbjct: 147 FAAATEGAAILSGASTEDAARWRRYGLNLGNAFQLADDVLDYLGDPEK 194


>gi|313618146|gb|EFR90238.1| heptaprenyl diphosphate synthase component II [Listeria innocua FSL
           S4-378]
          Length = 321

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           +Q++   I+  L   L   A+   +     LL A      GGK+IR   V   A L  + 
Sbjct: 10  MQKDIDLIEKELKKALTGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLSPDA 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +       G AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L   +
Sbjct: 64  DFEAVKNAGVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKS 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++  K     ++ +  MLS        G +  Q+ D  +            K KT  
Sbjct: 122 LEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKRKTAL 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 176 LIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|163760432|ref|ZP_02167514.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
 gi|162282383|gb|EDQ32672.1| Polyprenyl synthetase [Hoeflea phototrophica DFL-43]
          Length = 289

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 72/225 (32%), Positives = 110/225 (48%), Gaps = 14/225 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +  KRID  L+  +    +     +   +  A+RY++  GG +IR  L    A       
Sbjct: 2   DLQKRIDRNLEQAITFATA---GGNPSIICDALRYSVFPGGARIRPRLCLAVALAEGDEA 58

Query: 70  LTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            +A    A AIE +HC SL+HDDLP  D+   RRGKP+VH  + E TA++AG+ L+  AF
Sbjct: 59  PSASNAAATAIELLHCASLVHDDLPCFDDAATRRGKPSVHTAFGETTAVLAGDALIVLAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           E I+       D I + L+  +   +G+  G++ GQ  + +        + +  + KT +
Sbjct: 119 ETIARECLATPDRI-APLIGVIGRAVGMPHGIIAGQAWESEKSI----DLKVYHRAKTSS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   +  +GAI A A     +     GE LG  FQ+ADDL D   
Sbjct: 174 LFIGSTTAGAIAAGADP---QNWYRLGEALGDAFQVADDLRDFAS 215


>gi|325182786|emb|CCA17241.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 452

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 28/237 (11%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNH---- 69
           + T L  +       + T H   L +  +Y     GGKK+R  +V   +    VN     
Sbjct: 125 VQTELQSVTESIKQILGTDHPV-LSTVAKYFFEQDGGKKVRPTMVLLMSQAAEVNRLSNE 183

Query: 70  -------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
                            R+    E IH  SL+HDD+  +D   +RRG  +V+  + +  +
Sbjct: 184 LPLPSSQSKEFTMAAQQRLAEITEMIHTASLLHDDV--IDEAEMRRGIQSVNRVFGDKLS 241

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-T 175
           I+AG+ LL  +   ++  +     N++   ++S      ++G +           I    
Sbjct: 242 ILAGDFLLARSSVCLARLR-----NVKVVELMSTIIEHLVKGEVMQMRNVQNRSNISLLE 296

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   KT +LM  +C++   +   +    E    +G +LG+ FQL DD+LD E 
Sbjct: 297 YYLRKNYYKTASLMANSCKAALTLGQHTDYVCEMGFAYGRHLGLAFQLIDDVLDYEG 353


>gi|311741756|ref|ZP_07715567.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum
           DSM 15272]
 gi|311314762|gb|EFQ84668.1| possible trans-hexaprenyltranstransferase [Aeromicrobium marinum
           DSM 15272]
          Length = 332

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 14/224 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
            RI   +D++  Q A+ + +       +A      GGK+ R  +V  CA   +      +
Sbjct: 15  ARILAGVDEVERQLAAAVDSPEAFVAEAAAHLLNAGGKRFRPLVVALCAEFGDPAAPGVV 74

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
                +E  H  +L HDD+  MD    RRG  + + ++D   AI+ G+ L   A +I+S+
Sbjct: 75  PSAVVVELTHLATLYHDDV--MDEADKRRGALSANARWDNTLAILVGDYLFAQASDIVST 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCF 191
              +                     ++ GQ+ +               +   KTG+L+  
Sbjct: 133 LGPEAV----------RIQARTFSRLVRGQIRETIGPGDGDPLQHYLGVVADKTGSLIAT 182

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   GA+M+ A    +  L  FGE +G  FQL DD++D   +  
Sbjct: 183 SARFGAMMSAAPVEVEHALTEFGERIGAAFQLRDDIIDVASETG 226


>gi|260899213|ref|ZP_05907608.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037]
 gi|308106680|gb|EFO44220.1| geranyltranstransferase [Vibrio parahaemolyticus AQ4037]
          Length = 234

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 67/171 (39%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                   +AIECIH YSLIHDDLP+MD+  +RRG+PT HI++DE TAI+ G+ L T AF
Sbjct: 1   PEDLDTPASAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFDEATAILTGDALQTLAF 60

Query: 129 EIISS-PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKT 185
            II+  P +   +N R  ++ +L H+ G  GM  GQ LD   ++  +   ++  I + KT
Sbjct: 61  TIIADGPLSPSAENQRVNMIKALAHSSGANGMCVGQALDLGAENRQVSLAEMEEIHRKKT 120

Query: 186 GALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAL+  A + GA+ A          L  + + +G+ FQ+ DD+LD   D  
Sbjct: 121 GALIDCAVKLGALAAGEKGIEVLPHLERYSKAIGLAFQVQDDILDIISDTE 171


>gi|16801110|ref|NP_471378.1| hypothetical protein lin2044 [Listeria innocua Clip11262]
 gi|16414545|emb|CAC97274.1| lin2044 [Listeria innocua Clip11262]
          Length = 321

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 18/232 (7%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L  + 
Sbjct: 10  MQKDIDLVEKELKRALTGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARLSPDA 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +       G AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L   +
Sbjct: 64  DFEAVKNAGVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKS 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
            E ++  K     ++ +  MLS        G +  Q+ D  +            K KT  
Sbjct: 122 LEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKRKTAL 175

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 176 LIAASCGLGGVVSGQSEADYKKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|194904996|ref|XP_001981099.1| GG11874 [Drosophila erecta]
 gi|190655737|gb|EDV52969.1| GG11874 [Drosophila erecta]
          Length = 436

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCY 85
               L +   Y   G GK +R  +    A   N +             ++    E +H  
Sbjct: 137 SQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSA 196

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++     + SQ
Sbjct: 197 SLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQ 254

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++  L     +      Q+   + E             KT +L+  A ++ A++A A  N
Sbjct: 255 ILTDLVQGEFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 308

Query: 206 EKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             E    +G N+G+ FQL DD+LD     E + K
Sbjct: 309 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 342


>gi|116873372|ref|YP_850153.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742250|emb|CAK21374.1| heptaprenyl diphosphate synthase component II [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 321

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDLVEKELKKALSGAAAETTSDTALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             + +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 60  SPDADFGAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G I++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 172 KTALLIAASCGLGGIVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGSEKELGK 227


>gi|120601259|ref|YP_965659.1| trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4]
 gi|120561488|gb|ABM27232.1| Trans-hexaprenyltranstransferase [Desulfovibrio vulgaris DP4]
          Length = 321

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 10/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +QE   RI           A+ + T H      A      GGK++R  L    A      
Sbjct: 1   MQELKARIIAEQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYA 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +  ++E +H  +L+HDD+  +D+  +RRG    H  +     ++AG+ LL  A 
Sbjct: 61  DDDIYPLACSVELLHSATLLHDDI--LDDADLRRGMAAAHTVFGSTATVLAGDALLALAN 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            I++           S+ ++       +      ++  ++           I   KT  +
Sbjct: 119 LIVARYGDPRLTACISEAIIRTATGEIV------EIAHMRGTDHGRDTYIDIITGKTAWM 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
           +  +CE GA+ A AS+        FG +LGI FQ+ DD LD     D  K
Sbjct: 173 LRASCELGALRAGASEEAVRAAAAFGLDLGIAFQIVDDALDFADRADTGK 222


>gi|167461667|ref|ZP_02326756.1| heptaprenyl diphosphate synthasecomponent II (spore germination
           protein C3) [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322382208|ref|ZP_08056122.1| heptaprenyl diphosphate synthase component II-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153825|gb|EFX46192.1| heptaprenyl diphosphate synthase component II-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 326

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 8/218 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLL--SAIRYALLGGKKIRSFLVTECASLF-NVNHLTALR 74
             +D  +L    H     +D ++  S       GGK++R  +V   +      +    L+
Sbjct: 12  KRIDREILSLVKHDPDIPSDSVIGKSIAELVESGGKRLRPMMVIVGSRFGPRPSPRKTLQ 71

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + A  E IH  SLIHDD+  +D    RR +P +H +    TA+   N ++    E++S  
Sbjct: 72  LAAIAEFIHAASLIHDDI--IDRSDTRRNRPALHTKVGIQTAVHTANYMMARVVELLSQY 129

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
             +   +   Q   ++T      G    Q+    D  + E         KT  LM    +
Sbjct: 130 SKE--HDRYVQDFSAITTTQLCIGEY-QQLNHRFDFDVTEEVYLEKTGNKTAQLMATCLK 186

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            GA  + AS    ++L  FGE L + FQ+ DDLLD  +
Sbjct: 187 VGAKSSDASDAVADKLYQFGECLVMSFQIRDDLLDFTQ 224


>gi|195107776|ref|XP_001998484.1| GI23994 [Drosophila mojavensis]
 gi|193915078|gb|EDW13945.1| GI23994 [Drosophila mojavensis]
          Length = 435

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCYSLIHDDLP 93
           A  Y    GK +R  +    A   N +             ++    E +H  SL+HDD+ 
Sbjct: 144 ACYYFDGQGKALRPMVTMLMAKALNYHLNNESHQLVHKQRQIALFSEMVHSASLVHDDV- 202

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRGKP+V+  ++     +AG+ +L+ A  +IS  ++     + SQ++  L   
Sbjct: 203 -IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDVTIVLSQILTDLVQG 261

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +      Q+   + E             KT +L+  A ++ A++A A  N  E    +
Sbjct: 262 EFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQY 315

Query: 214 GENLGIIFQLADDLLDC---EEDLPK 236
           G N+G+ FQL DD+LD     E + K
Sbjct: 316 GRNIGLAFQLVDDMLDFVSSTEQMGK 341


>gi|255324689|ref|ZP_05365803.1| bifunctional short chain isoprenyl diphosphate synthase
           [Corynebacterium tuberculostearicum SK141]
 gi|255298164|gb|EET77467.1| bifunctional short chain isoprenyl diphosphate synthase
           [Corynebacterium tuberculostearicum SK141]
          Length = 334

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 16/230 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH- 69
           + ++RI   ++ +  +  S +    +         +  GGK+ R  +    +        
Sbjct: 17  QLNERIGAGMEAVEDKLRSEIDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGPRPGC 76

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              ++    +E +H  +L HDD+  MD    RRG  + + +++   AI+AG+ LL +A  
Sbjct: 77  KEVVKAATVVEMVHVATLYHDDV--MDEADRRRGVESANSRWNNSVAILAGDALLAHASR 134

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGA 187
           ++S   T    +               + ++ GQM +     E         + + KT  
Sbjct: 135 LMSELDTHTVGH----------FADTFEELVTGQMRETIGAGEANAVEHYTAVIREKTAV 184

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           L+  A   GA  + AS      L   G  +G+IFQ+ DD++D   D PK+
Sbjct: 185 LIASAGYLGAYHSGASAEHAAALHRIGGAIGMIFQIVDDVIDIFSD-PKE 233


>gi|198450324|ref|XP_001357936.2| GA15930 [Drosophila pseudoobscura pseudoobscura]
 gi|198130986|gb|EAL27072.2| GA15930 [Drosophila pseudoobscura pseudoobscura]
          Length = 445

 Score =  155 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 25/235 (10%)

Query: 19  ILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN---- 68
           ILDD L      ++           L +   Y   G GK +R  +    A   N +    
Sbjct: 125 ILDDELKYFYDDVRDLLQSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 184

Query: 69  ----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    +V    E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L
Sbjct: 185 SHQLVHKQRQVALFSEMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYIL 242

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + A  +I+  ++     + SQ++  L     +      Q+   + E             K
Sbjct: 243 SIASIMIARLRSDDVTIVLSQILTDLVQGEFM------QLGSRETENERFAHYLTKTYRK 296

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T +L+  A ++ A++A A  N  E    +G N+G+ FQL DD+LD     E + K
Sbjct: 297 TASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 351


>gi|332019800|gb|EGI60261.1| Decaprenyl-diphosphate synthase subunit 1 [Acromyrmex echinatior]
          Length = 337

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 16/240 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHM-QTQHNDRLLSAIRYALLG-GKKIRSFLV 58
           M G LP    +    ++  L D+ +   + + +    + L     Y   G GK +R    
Sbjct: 5   MPGSLPDYQIDPYTLVEDDLKDIFVDIRTRLIKNTSLEELQPISTYYFDGQGKAVRPMFT 64

Query: 59  TECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
              A   N +           ++    E IH  SL+HDD+  +D    RRGKP+V++ + 
Sbjct: 65  ILMARAINYHKGRNDLLYSQRQIAMISEMIHNASLLHDDV--IDQSDFRRGKPSVNVLWS 122

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           +    +AGN +L+ A  ++S   +       SQL+  L     +      Q+   + E  
Sbjct: 123 QKKVAMAGNYILSIACMMLSEIHSDDVTISISQLISDLVQGEFM------QLGSKETENE 176

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                      KT +L+    +  AI+++  +   E    +G N+G+ FQL DDLLD   
Sbjct: 177 RFAHYLTKTYRKTASLIANCMKGVAILSNVDERTIEMAFQYGRNVGLAFQLVDDLLDFVA 236


>gi|5912297|emb|CAB56064.1| geranylgeranyl pyrophosphate synthase [Paracoccus marcusii]
          Length = 291

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 4/216 (1%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T+L   + + A          L +A+  AL  GK+ R  L+   A        T +    
Sbjct: 11  TLLQTRIEEIAQGFGAVLQP-LGAAMA-ALSSGKRFRGMLMLLAAEASGGVCDTIVDAAC 68

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H  SLI DDLP MD+  +RRG+P  H+ + E  A++ G  L+T A  +++  +  
Sbjct: 69  AVEMVHAASLIFDDLPCMDDAGLRRGQPATHVAHGESRAVLGGIALITEAMALLAGAR-G 127

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               +R+QL+  L+ ++G QG+  GQ LD+         V   Q +KTG L     E  A
Sbjct: 128 ASGTVRAQLVRILSRSLGPQGLCAGQDLDLHAAKNG-AGVEQEQDLKTGVLFIAGLEMLA 186

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++      E+ ++  FG  LG +FQ  DDLL+   D
Sbjct: 187 VIKEFDAEEQTQMIDFGRQLGRVFQSYDDLLEVVGD 222


>gi|172039945|ref|YP_001799659.1| putative polyprenyl diphosphate synthase [Corynebacterium
           urealyticum DSM 7109]
 gi|171851249|emb|CAQ04225.1| putative polyprenyl diphosphate synthase [Corynebacterium
           urealyticum DSM 7109]
          Length = 336

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 27/237 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           +N  + + LQE         +D L    S  ++   D++      AL GGK+ R      
Sbjct: 19  LNDRITAGLQEA--------EDFLRWRLSQGESFITDKI---SHLALAGGKRFRVVFALL 67

Query: 61  CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A    N            +E  H  +L HDD+  MD    RRG  + + ++    AI+A
Sbjct: 68  AAQYGKNPTARKVRDAAVVVELTHLATLYHDDV--MDEADRRRGAESANARWGNSMAILA 125

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQ 176
           G+ L   A EI+S              +       G   ++ GQM +       E     
Sbjct: 126 GDYLFAVASEILSGLGAH--------TVRHFADTFG--ELVTGQMRETVGAADGEDAIEH 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              + + KTG L+  A   GA+ + A Q   + L  FG ++G IFQ+ DD++D   D
Sbjct: 176 YMKVIQEKTGVLIASAGYLGALHSGAEQEHVDALAQFGRHMGQIFQIVDDIIDIWAD 232


>gi|312199711|ref|YP_004019772.1| polyprenyl synthetase [Frankia sp. EuI1c]
 gi|311231047|gb|ADP83902.1| Polyprenyl synthetase [Frankia sp. EuI1c]
          Length = 338

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR +PT  
Sbjct: 53  GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + +     ++ ++L      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLLEVEGE--PGRKAAVIL----GAGVQDLVRGQAEDLL 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     ++  KTGAL+  A   GA++A A +   + L  FG  LG  FQL D
Sbjct: 165 FESRSDVTVAETLHMEDGKTGALLACAASLGAVLAGAPKEVVDGLAEFGSRLGTAFQLID 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|195388636|ref|XP_002052985.1| GJ23628 [Drosophila virilis]
 gi|194151071|gb|EDW66505.1| GJ23628 [Drosophila virilis]
          Length = 445

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCYSLIHDDLP 93
           A  Y    GK +R  +    A   N +             ++    E +H  SL+HDD+ 
Sbjct: 154 ACYYFDGQGKALRPMVTMLMAKALNYHLNNESHQLVHKQRQIALFSEMVHSASLVHDDV- 212

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRGKP+V+  ++     +AG+ +L+ A  +IS  ++     + SQ++  L   
Sbjct: 213 -IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMISRLRSDDVTIVLSQILTDLVQG 271

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
             +      Q+   + E             KT +L+  A ++ A++A A  N  E    +
Sbjct: 272 EFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQY 325

Query: 214 GENLGIIFQLADDLLDC---EEDLPK 236
           G N+G+ FQL DD+LD     E + K
Sbjct: 326 GRNIGLAFQLVDDMLDFVSSTEQMGK 351


>gi|227544097|ref|ZP_03974146.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A]
 gi|300909796|ref|ZP_07127257.1| polyprenyl synthetase [Lactobacillus reuteri SD2112]
 gi|227185930|gb|EEI66001.1| trans-hexaprenyltranstransferase [Lactobacillus reuteri CF48-3A]
 gi|300893661|gb|EFK87020.1| polyprenyl synthetase [Lactobacillus reuteri SD2112]
          Length = 326

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 12/223 (5%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASL---FNVNHLT 71
           I+  L  +  QT +   T  N +L  A++  A  GGK +R       A++          
Sbjct: 12  INNALGKVN-QTINDRITIKNTQLHDALQQMASNGGKYLRPAFFLLFANINHQTADEQER 70

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +++ +++E +H  +LIHDD+  +D+   RRG  +V   + + TA+  G+ L T  F+++
Sbjct: 71  LIKIASSLEVLHMATLIHDDI--IDDSPKRRGAVSVQSAFGKDTAVYTGDFLFTIFFDLL 128

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
               T      R+    + T    L G L GQM +  D        +     KT A+   
Sbjct: 129 VETMTGSPYLTRN----ARTMRKILTGEL-GQMDNRFDLDQSLLDYYRNVNGKTAAIFSL 183

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           A E GA   H+ +      +  G+N+GI FQ+ DD+LD   D 
Sbjct: 184 AAEEGAYFGHSDRRTINLAKRIGQNIGISFQILDDILDYSGDE 226


>gi|156405854|ref|XP_001640946.1| predicted protein [Nematostella vectensis]
 gi|156228083|gb|EDO48883.1| predicted protein [Nematostella vectensis]
          Length = 427

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 16/212 (7%)

Query: 29  SHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIE 80
            H      + L     Y   G GK IR  +V   A+  N +   +              E
Sbjct: 123 KHELNTSVETLQRVSHYYFDGKGKYIRPRIVLLMAAATNYHSHRSRVILHDQETAAMISE 182

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SLIHDD+  +D    RRGK  +++ Y +   I+AG+ +L+     I+        
Sbjct: 183 MIHTASLIHDDV--IDRADTRRGKVAINLMYGDKNCILAGDYILSRVSLAIARFGNVEAV 240

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + ++++  L     +      Q+   ++     T        KT +L+   C++  ++ 
Sbjct: 241 KLLAEIVDELVRGEFM------QLGSKENPDERFTHYLKKTYKKTASLIACCCKTAVLLG 294

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  + ++    +G N+GI FQL DD+LD   
Sbjct: 295 DSPPDIQDIAFQYGRNVGIAFQLVDDVLDFVS 326


>gi|189502166|ref|YP_001957883.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497607|gb|ACE06154.1| hypothetical protein Aasi_0775 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 324

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 10/198 (5%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDL 92
            N  +   I+Y+    GK++R  LV   AS+   +      R  A +  +H  SLIHDD+
Sbjct: 27  ENPVIQQVIQYSFQQQGKQLRPQLVLIVASVLGNDITEKTRRGAALVSLLHHASLIHDDV 86

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D    RR K TV+ ++    A++ G+ +L  + +I    +      + +    +++ 
Sbjct: 87  --VDEATYRRHKETVNARWGNKLAVLFGDYVLANSLQIAIENQDYDFLPMLTITTQTMSE 144

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              L      Q+   Q+    E     I + KT +L+  +C  GA+   ASQ + E +  
Sbjct: 145 GEIL------QLKQAQEIMASEATYLEIIQKKTASLLAASCAMGAMSVSASQEQIEIMYA 198

Query: 213 FGENLGIIFQLADDLLDC 230
            GE +G+ FQL+DDL+D 
Sbjct: 199 IGEQIGMAFQLSDDLIDY 216


>gi|242309903|ref|ZP_04809058.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523200|gb|EEQ63066.1| polyprenyl synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 306

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 22/224 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  ++I+  ++D L +  S +  + + ++          GK +RS L    A        
Sbjct: 2   EALEQINQKIEDFLEELESPIVLELSSKIQR--------GKMLRSKLALNIA----TESE 49

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             + + A IE I   SL+HDD+  +DN  +RR KP+++    +  AI+ G+ L + AF  
Sbjct: 50  ECILLCAIIEMIQSASLLHDDV--IDNATMRRSKPSINAIAGDKNAIMLGDILYSKAFCE 107

Query: 131 ISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           ++  +        I +  + +L         L  Q         +E +   + + KT +L
Sbjct: 108 LTQFQENFPMIPRIVANAVTTLAIGEMEDVELAKQF------NANEAKYLTMVEHKTASL 161

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +     + A ++  +Q E +  R +G NLGI FQ+ DD+LD   
Sbjct: 162 IESTAYAAAFLSGRNQEEAKSFRIYGRNLGIAFQIIDDVLDIVS 205


>gi|226307057|ref|YP_002767017.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis
           PR4]
 gi|226186174|dbj|BAH34278.1| probable geranylgeranyl pyrophosphate synthase [Rhodococcus
           erythropolis PR4]
          Length = 379

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 34/246 (13%)

Query: 16  IDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-----ECASLFNV 67
            +  L D      +  S++   +   + +   + L GGK++R                  
Sbjct: 32  FEGALRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGS 91

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------------- 111
           +    +R  AA+E +   +L+HDD+  +D    RRG PTVH+++                
Sbjct: 92  DAEAVIRACAALELVQACALVHDDI--IDASTTRRGFPTVHVEFEDQHRGEEWSGDSAHF 149

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
            E  AI+ G+  L +A ++I           R   + S         +LGGQ LDI +E 
Sbjct: 150 GEAVAILLGDLALAWADDMIRESGISPDAAARVSPVWSAMRT----EVLGGQFLDISNEA 205

Query: 172 IDETQVF---MIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             +  V     + + KT A  +      GA +  A     +  R FG ++GI FQL DDL
Sbjct: 206 RGDETVEAAMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDDL 265

Query: 228 LDCEED 233
           L    D
Sbjct: 266 LGVFGD 271


>gi|239983545|ref|ZP_04706069.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291455362|ref|ZP_06594752.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291358311|gb|EFE85213.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 297

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 6   GGKAVRPALALLSAEAAGAAPEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 63

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ L   A EI+    T      R+   L+      + G       + +
Sbjct: 64  KVHGPAQAILAGDALFALANEILLELGTLEAG--RAARRLTTASRALIDGQAQDISYEHR 121

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 122 -ERVSVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALERYGYHLGLAFQAVDDLL 180

Query: 229 DCEED 233
               D
Sbjct: 181 GIWGD 185


>gi|227502598|ref|ZP_03932647.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens
           ATCC 49725]
 gi|227076638|gb|EEI14601.1| possible trans-hexaprenyltranstransferase [Corynebacterium accolens
           ATCC 49725]
          Length = 334

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 16/216 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAI 79
           + + +       +  D L   + + +  GGK+ R  +    +           ++    +
Sbjct: 27  EAVEEKLRSETDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGAKPGCEKVIKSATVV 86

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +L HDD+  MD    RRG  + + +++   AI+AG+ LL +A  ++S   T   
Sbjct: 87  EMVHVATLYHDDV--MDEADRRRGVESANSRWNNSVAILAGDALLAHASRLMSQLDTHTV 144

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
            +               + ++ GQM +     E         + + KT  L+  A   GA
Sbjct: 145 GH----------FADTFEELVTGQMRETIGAGEANPVDHYMAVIQEKTAVLIASAGYLGA 194

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + AS +    L   G  +G+IFQ+ DD++D   D
Sbjct: 195 YHSGASADHAAALYRIGGAIGMIFQIVDDVIDIFSD 230


>gi|86739535|ref|YP_479935.1| polyprenyl synthetase [Frankia sp. CcI3]
 gi|86566397|gb|ABD10206.1| Polyprenyl synthetase [Frankia sp. CcI3]
          Length = 338

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A        T L    A+E +H +SL+HDDL  MD    RR +PT  
Sbjct: 53  GGKLVRPALALLSAQAAGAPAETGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + +     R+ L+L      G+Q ++ GQ  D+ 
Sbjct: 111 TIFGADGAILAGDALLGLATQVLLEVEGE--PGRRAALIL----GAGVQDLVRGQAEDLM 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     ++  KTGAL+  +   GA++A A  +    L  +G  LG  FQL D
Sbjct: 165 FEKRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAGDDMVNALAEYGSRLGTAFQLID 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|297170662|gb|ADI21686.1| geranylgeranyl pyrophosphate synthase [uncultured
           Verrucomicrobiales bacterium HF0130_14P10]
          Length = 344

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 14/220 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
            D  LL  A+H      D  + A+     GGK+IR  LV  C           L+  + +
Sbjct: 31  FDTYLLGRANHFDPAVRDLAVQALA---SGGKRIRPALVHACGIGNLAVSENLLKASSIV 87

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +L+HDD+  +D+  IRR + TV+       AI+ G+ L  +A E+ S      +
Sbjct: 88  EFVHVATLVHDDV--LDDASIRRDRQTVYADRGATAAILLGDALFAHALEMASE----FQ 141

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            N   + + + T       +   Q     D  +  ++  +I + KT  L   +C  GA +
Sbjct: 142 GNEVCRWVAAATRRTCSGEI--QQSFLRGDFTLTSSRYKLIIEAKTAELFTVSCRLGAHV 199

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           A            FG  LG+ +Q+ DDL+D    E D  K
Sbjct: 200 AGLDNATSALACEFGRRLGLAYQIYDDLVDVFGREADFGK 239


>gi|83815330|ref|YP_445348.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
 gi|294507229|ref|YP_003571287.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8]
 gi|83756724|gb|ABC44837.1| polyprenyl synthetase [Salinibacter ruber DSM 13855]
 gi|294343557|emb|CBH24335.1| Octaprenyl-diphosphate synthase [Salinibacter ruber M8]
          Length = 355

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 12/235 (5%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           +P+ L +    ++  LD         M++ H   L    +Y L   GK+IR  LV   A 
Sbjct: 31  VPTTLDDIRVPVEDDLDAFRSYFREAMRSDHM-LLDKVTQYVLWQKGKRIRPILVLLSAQ 89

Query: 64  LFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                      R  A +E +H  +L+HDD+  +D+   RRG  +++  +    A++ G+ 
Sbjct: 90  ACGGAATDQTHRAAALVELLHTATLVHDDV--VDDAEERRGVFSINALWKNKIAVLLGDF 147

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL+          +   D+      LS       +G L  Q+   +   IDE   F I  
Sbjct: 148 LLSR-----GLLLSLDHDDYSVLHTLSDAVRRMSEGELL-QIEKSRLLDIDEETYFRIIS 201

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
            KT +L+    +SGA+     +   ER+  FGE LG+ FQ+ DDL D   ED  K
Sbjct: 202 DKTASLISACTKSGAVSVTDDEALIERMDEFGETLGLAFQIRDDLFDFSAEDAGK 256


>gi|42518501|ref|NP_964431.1| hypothetical protein LJ0408 [Lactobacillus johnsonii NCC 533]
 gi|41582786|gb|AAS08397.1| hypothetical protein LJ_0408 [Lactobacillus johnsonii NCC 533]
          Length = 350

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 19/219 (8%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT---ALRV 75
            ++ ++L+  + +     D L          GK +R   V    S     H       ++
Sbjct: 39  AINRIILKHVNTVPGLLGDALKDTFA---SPGKMLRPACVMLFGSFGPNGHEKRKELQKI 95

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             +IE +H  +LIHDD+  +D   +R G+P++  +Y +  A+ AG+ L   +  ++S   
Sbjct: 96  ATSIETLHNATLIHDDI--IDESSMRHGRPSIQTKYGKHIAVYAGDYLFALSLTLLSENA 153

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFA 192
             L   I             +Q +L G+     + +   I E +     K KTG L   A
Sbjct: 154 QSLHSVI--------ADGKTMQNILVGETEQYNNAYKINISEKEYLDQIKGKTGVLFGLA 205

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           C  GA  +     +  + + FG+ LG  FQL DD+LD  
Sbjct: 206 CFIGAYESGLKVTKALKAKKFGDYLGQAFQLRDDILDYT 244


>gi|13541093|ref|NP_110781.1| geranylgeranyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
 gi|14324478|dbj|BAB59406.1| farnesyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
          Length = 354

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 20/243 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67
           +     +ID  +     +     +   + R++  IR Y   GGK++R   +     LF+ 
Sbjct: 12  VASYKAKIDESISRFFDRKEEETKDVLSKRVIKIIRDYTEGGGKRLRPIFMILGYRLFSP 71

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ--------------YDE 113
                     +IE    Y LIHDD+  +D   +RRGKP++HI+                E
Sbjct: 72  EEKGIFDASISIELAQSYLLIHDDV--IDKSDVRRGKPSMHIRLEDAFVAGCPQSRSTAE 129

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             AI+AG+   +YA E +       ++ +++ L LS T  +   G     +    D+F +
Sbjct: 130 GLAIVAGDLAESYAHEALLRSGFYSENLVKADLELSKTIEMTGYGQFLDILSTTMDDF-N 188

Query: 174 ETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           E  +  +   KT    +      GAI++  ++ +   LR +G  LGI FQL DD+L    
Sbjct: 189 EGDLIRLHLWKTAKYTLEGPLAMGAILSG-TEYDITALREYGRVLGIAFQLKDDILGLFG 247

Query: 233 DLP 235
           D  
Sbjct: 248 DEK 250


>gi|297190552|ref|ZP_06907950.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297150531|gb|EDY61773.2| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 372

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 81  GGKAVRPALALLSAEAAGAAPEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 138

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 139 KVHGPAQAILVGDALFAVANEVLLESGTVEAG--RAARRLTTASRKLIDGQAQDISFEHR 196

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A +   + L  +G +LG+ FQ  DDLL
Sbjct: 197 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADERTADTLEAYGYHLGLAFQAVDDLL 255

Query: 229 DCEED 233
               D
Sbjct: 256 GIWGD 260


>gi|224437780|ref|ZP_03658727.1| hypothetical protein HcinC1_07400 [Helicobacter cinaedi CCUG 18818]
          Length = 303

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 17/220 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           ++  L+ +      +++   ND +L+   + L  GK +RS L+   +         +LR 
Sbjct: 3   LEFALERIKAYIDMYIKECGNDEVLNLSSH-LSQGKMLRSKLLLAIS----GVSEDSLRA 57

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE I   SL+HDD+  +D    RR KP+++  +    AI+ G+ L + AF  +S   
Sbjct: 58  CALIEMIQSASLLHDDV--IDEAQTRRQKPSINALFGNKNAIMLGDVLYSKAFYELSCLD 115

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
            +L  ++ S ++          G +    L  +   ID+     +   KT AL+  A E 
Sbjct: 116 VRLAQSVSSAVVRL------SIGEIEDVSLASRFH-IDKQAYIKMCGNKTAALIVAAAEC 168

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           GAI+   ++N     R +GENLGI FQ+ DD+LD  +D  
Sbjct: 169 GAILKGLNKNI---YRIYGENLGIAFQIIDDILDFTQDSK 205


>gi|328886497|emb|CCA59736.1| Octaprenyl-diphosphate synthase ; Dimethylallyltransferase ;
           Geranyltranstransferase (farnesyldiphosphate synthase) ;
           Geranylgeranyl pyrophosphate synthetase [Streptomyces
           venezuelae ATCC 10712]
          Length = 352

 Score =  154 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 5/184 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A    V     +    A+E +H +SL+HDDL  MD    RR + TV  
Sbjct: 62  GKAVRPALALLSAEAAGVAPEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVWK 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AI+ G+ L   A EI+    T      R+   L+      + G       + + 
Sbjct: 120 VHGPAQAILVGDALFALANEILLELGTVEAG--RATRRLTTASRKLIDGQAQDISYEHR- 176

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           E +   +   ++  KTGAL+  A   GA++  A     ++L  +G +LG+ FQ  DDLL 
Sbjct: 177 ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLLG 236

Query: 230 CEED 233
              D
Sbjct: 237 IWGD 240


>gi|139439484|ref|ZP_01772916.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC
           25986]
 gi|133775037|gb|EBA38857.1| Hypothetical protein COLAER_01942 [Collinsella aerofaciens ATCC
           25986]
          Length = 341

 Score =  154 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 14/239 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT 59
           ++    S L ++  +I+  L       A+    +    L + +  +    GK+ R  +  
Sbjct: 5   VSSPFTSFLAQHFDQINDYLATFFDGQATSADIER--YLYAPLSTFTANAGKRHRPLICM 62

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A+    +  +A    AAIE     +LIHDD+   DNG +RRGKP +H+      AI  
Sbjct: 63  LAATAVGGSFESARSAAAAIEHFQSGALIHDDIA--DNGQLRRGKPCMHLTEGTGLAINC 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDE 174
           G+  LT   + +    T L+ +++ +++  LT    +   + GQ LD+         I  
Sbjct: 121 GDLALTMVTKTVLDDPT-LESDVKLRVLHELTE--MIVRTIEGQALDLGWVRDGRFDISV 177

Query: 175 TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                +   KT          +GAI+   S  + E LR FG + G+ FQ+ DDLL+   
Sbjct: 178 DDYLDMATHKTAFYSGATPLAAGAIIGGGSDEQIEALRAFGLHTGLAFQIQDDLLNLVG 236


>gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group]
          Length = 333

 Score =  154 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 13/196 (6%)

Query: 43  IRYALLG-GKKIRSFLVTECA-SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +RYALL  G ++   L                L   AA E +H  SL+HDD P MD+   
Sbjct: 1   MRYALLAAGNRVGPALSLAAFPRCSGARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDDDF 60

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-------NIRSQLMLSLTHN 153
           RRGKPT H+ Y E  A++ G+ LL+ +F  ++   +   D           + +  L   
Sbjct: 61  RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARC 120

Query: 154 IGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           IG +G++ GQ++D++     E +   ++  I   KT AL+  +   GAI+   S  + E 
Sbjct: 121 IGSEGLVAGQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIES 180

Query: 210 LRCFGENLGIIFQLAD 225
           LR +  ++G++FQ+ D
Sbjct: 181 LRMYARSIGLLFQVVD 196



 Score = 91.4 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           + + + +     +IGL   +    +    E +   ++  I   KT AL+  +   GAI+ 
Sbjct: 175 DEQIESLRMYARSIGLLFQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILG 234

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             S  + E LR +  ++G++FQ+ DD+LD     E+L K
Sbjct: 235 GGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEELGK 273


>gi|159465717|ref|XP_001691069.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii]
 gi|158279755|gb|EDP05515.1| geranyl diphosphate synthase [Chlamydomonas reinhardtii]
          Length = 410

 Score =  154 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 32/235 (13%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTECASLFNVN---------- 68
           D++ +   H  T     L +A  Y       GK++R  L    +S  +            
Sbjct: 77  DVVSERLRHSVTTGIPALKTAAEYFFRRGIEGKRLRPTLALLMSSALSPAAPSPEYLQVD 136

Query: 69  -----------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                           R+    E IH  SL+HDD+  +D+   RRG  +++      TAI
Sbjct: 137 TRPAAEHPHEMRRRQQRLAEIAELIHVASLLHDDV--IDDAQTRRGVLSLNTSVGNKTAI 194

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           +AG+ LL  A   ++S +      + SQ++  L     +      QM    ++ +D    
Sbjct: 195 LAGDFLLARASVTLASLRNSEIVELMSQVLEHLVSGEIM------QMTATSEQLLDLEHY 248

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 KT +LM  +  S A++A A+    +    +G +LGI FQ+ DDLLD   
Sbjct: 249 LAKTYCKTASLMANSSRSVAVLAGAAPEVCDMAWSYGRHLGIAFQVVDDLLDLTG 303


>gi|46581581|ref|YP_012389.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46451004|gb|AAS97649.1| octaprenyl-diphosphate synthase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235224|gb|ADP88078.1| Polyprenyl synthetase [Desulfovibrio vulgaris RCH1]
          Length = 321

 Score =  154 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 10/230 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +QE   RI           A+ + T H      A      GGK++R  L    A      
Sbjct: 1   MQELKARIIAEQPRFNATLATEVGTLHPLVQPVAAHVLKAGGKRLRPLLTLLVARALGYA 60

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +  ++E +H  +L+HDD+  +D+  +RRG    H  +     ++AG+ LL  A 
Sbjct: 61  DDDIYPLACSVELLHSATLLHDDI--LDDADLRRGMAAAHTVFGSTATVLAGDALLALAN 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            I++           S+ ++       +      ++  ++           I   KT  +
Sbjct: 119 LIVARYGDPRLTACISEAIIRTATGEIV------EIAHMRGTDHGRDTYIDIITGKTAWM 172

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPK 236
           +  +CE GA+ A AS+        FG +LGI FQ+ DD LD     D  K
Sbjct: 173 LRASCELGALRAGASEEAVRAAAAFGLDLGIAFQIVDDALDFADRADTGK 222


>gi|315605114|ref|ZP_07880166.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313221|gb|EFU61286.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 337

 Score =  154 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 21/221 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALR 74
            +++  LL+  S  +   ++        A+ GGK++R  L   CA L   +       L 
Sbjct: 22  EVVERRLLEAVSSSRDLTDEL---TSHLAVAGGKRMRPLLTLVCAQLGESDRRLDDAVLT 78

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+E  H  SL HDD+  MD+   RRG P+    +    AI+AG+ L   A  +++S 
Sbjct: 79  AATAVELTHLASLYHDDV--MDSAPTRRGVPSAQHLWGNNRAILAGDILFARASLLVASL 136

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCF 191
             ++  +          H    + +  GQ+ +         +      +   KTG+L+  
Sbjct: 137 GPEIVAH----------HARTFERLCQGQLNETFGPTHGADRVDFYLQVLADKTGSLVST 186

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A   GA+++ A +   + +  FGE +G+ FQ+ADD+LD   
Sbjct: 187 AASFGALLSGAGRLVADVVADFGEKVGVAFQIADDVLDLAS 227


>gi|224498620|ref|ZP_03666969.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes Finland 1988]
          Length = 274

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 9   LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 63  APNADFDAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 121 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 175 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230


>gi|254168815|ref|ZP_04875656.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
 gi|197622252|gb|EDY34826.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
          Length = 350

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 37/248 (14%)

Query: 15  RIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
           +I+  L D   +      H  ++    +L    Y L GGK+IR+ L+     +    +  
Sbjct: 13  KIEESLMDFFKEKKKGLEHWSSREACEILE--EYTLRGGKRIRAILMIVGYKMMGGKNDE 70

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVT 115
            ++  +++E I  Y LIHDD+  MD   +RRGK TVH                 ++ E  
Sbjct: 71  IIKASSSLELIQSYLLIHDDI--MDESDLRRGKDTVHKIYEKKHLKNGFGGRPIRFGESM 128

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-- 173
           AIIAG+    YA EI+SS     +  +++   L    N  ++    GQ++DI    +D  
Sbjct: 129 AIIAGDLANAYAMEILSSSDFPAELKVKAIHKL----NEIIEYTGYGQIIDIYSGALDEF 184

Query: 174 -ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC- 230
            E  + ++ K KT    +      G I+A     E E +  +   +GI FQL DD+L   
Sbjct: 185 KEEDLLLLHKYKTARYTIEGPLALGMILAG---KEPEGIENYAIPVGIAFQLQDDILGLF 241

Query: 231 --EEDLPK 236
             EE++ K
Sbjct: 242 GSEEEIGK 249


>gi|328543228|ref|YP_004303337.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase
           [polymorphum gilvum SL003B-26A1]
 gi|326412974|gb|ADZ70037.1| Farnesyl pyrophosphate synthetase / geranyltranstransferase
           [Polymorphum gilvum SL003B-26A1]
          Length = 336

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F       + + A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 55  GGKRLRPMLTLALADMFGYQGSGHVTLSASVEFMHTATLLHDDV--VDESDMRRGKLAAR 112

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +L+    +  +G +  Q+   +
Sbjct: 113 KLWGNQASVLVGDYLLGQAFKMMVDVGS-----LEALRVLAEASAVIAEGEVM-QLGAAK 166

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E     + + KT AL   A E G I+A  S       R +G  LG+ FQL DD L
Sbjct: 167 NLATSEASYMKVIEAKTAALFAAAAEVGPIIAGQSAETCAAARRYGMELGLAFQLVDDAL 226

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 227 DYGGSSADLGK 237


>gi|293191764|ref|ZP_06609288.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309]
 gi|292820457|gb|EFF79440.1| decaprenyl diphosphate synthase [Actinomyces odontolyticus F0309]
          Length = 337

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 27/236 (11%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
            L S++    + ++  L D +        +   D      R+ A+ GGK++R  L   CA
Sbjct: 12  DLESRITPGLEVVERRLLDAV--------SSSRDLTDELTRHLAVAGGKRMRPLLTLVCA 63

Query: 63  SLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            L           +    A+E  H  SL HDD+  MD+   RRG P+    +    AI+A
Sbjct: 64  QLGEPERGLDEQVITAATAVELTHLASLYHDDV--MDSAPTRRGVPSAQHLWGNNRAILA 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--- 176
           G+ L   A  +++S   ++  +          H    + +  GQ+ +         +   
Sbjct: 122 GDILFARASLLVASLGPEMVAH----------HARTFERLCEGQLNETFGPTDGADRVDF 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +   KTG+L+  A   GA+++ A Q   + +  FGE +G+ FQ+ADD+LD   
Sbjct: 172 YLQVLADKTGSLVSTAASFGALLSGAGQLMADVVSDFGEKVGVAFQIADDVLDLAS 227


>gi|254556045|ref|YP_003062462.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum JDM1]
 gi|254044972|gb|ACT61765.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum JDM1]
          Length = 330

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 10/211 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
            L+    +      ND +L  I     GGK +R       +     +    + + A++E 
Sbjct: 26  QLMTANINIQDADINDAILEMIH---GGGKLLRPAYCLLFSQFTTTDRQRMVALAASLET 82

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  +LIHDD+  +D+  +RR   T+  ++ + TA+ AG+ L    F+I++   +  K  
Sbjct: 83  LHTATLIHDDI--VDDAALRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSSSFK-- 138

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
             S  M S      L G +  Q        I   +     + KT  L   +C  GA  + 
Sbjct: 139 --SIQMNSENMEKILVGEV-QQKNRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESG 195

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            S +  +R R  G  +G+ FQ+ DD+LD +E
Sbjct: 196 QSSHFAQRARKAGLAIGMAFQILDDILDYQE 226


>gi|224068584|ref|XP_002326151.1| predicted protein [Populus trichocarpa]
 gi|222833344|gb|EEE71821.1| predicted protein [Populus trichocarpa]
          Length = 321

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 28/222 (12%)

Query: 31  MQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVN-----------------HL 70
           M      +L SA  Y   +G  GK+ R  ++   A+  NV                    
Sbjct: 1   MVIAEVPKLASAAEYFFKMGVQGKRFRPTVLLLMATALNVRILETETGSEGDALTTELRK 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +    E IH  SL+HDD+  +D+   RRG  ++++      A++AG+ LL+ A   
Sbjct: 61  RQQSIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNLVMGNKVAVLAGDFLLSRACVA 118

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++S K      + +  +  L +   +      QM    ++             KT +L+ 
Sbjct: 119 LASLKNTEVVTLLATAVEHLVNGETM------QMTSTSEQRCSMEYYMQKTYYKTASLIS 172

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +C++ A++A  +         +G+NLG+ +QL DD+LD   
Sbjct: 173 NSCKAIALLAGQTTEVAMLAFEYGKNLGLAYQLIDDVLDFTG 214


>gi|306835165|ref|ZP_07468202.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC
           49726]
 gi|304568954|gb|EFM44482.1| trans-hexaprenyltranstransferase [Corynebacterium accolens ATCC
           49726]
          Length = 334

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 16/216 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAI 79
           + + +       +  D L   + + +  GGK+ R  +    +           ++    +
Sbjct: 27  EAVEEKLRSETDRGQDFLKDKVSHLSKAGGKRFRPMMALLASEYGAKPGCEEVIKSATVV 86

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  +L HDD+  MD    RRG  + + +++   AI+AG+ LL +A  ++S   T   
Sbjct: 87  EMVHVATLYHDDV--MDEADRRRGVESANSRWNNSVAILAGDALLAHASRLMSQLDTHTV 144

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGA 197
            +               + ++ GQM +     E         + + KT  L+  A   GA
Sbjct: 145 GH----------FADTFEELVTGQMRETIGAGEANPVDHYMAVIQEKTAVLIASAGYLGA 194

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             + AS +    L   G  +G+IFQ+ DD++D   D
Sbjct: 195 YHSGASADHAAALYRIGGAIGMIFQIVDDVIDIFSD 230


>gi|257056312|ref|YP_003134144.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
 gi|256586184|gb|ACU97317.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
          Length = 335

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 18/237 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL----GGKKIRSF 56
           M   LPS++    + +   L + +      M+   +        +  +    GGK +R  
Sbjct: 1   MTAILPSEVSATQQLVQPALREAVTTLTPAMRRIVSYHFGWTDEHGEVVNGGGGKALRPA 60

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L    A        +AL    A+E +H +SL+HDD+  MD    RR +PT    +    A
Sbjct: 61  LALLAARAVGAPPESALPGAVAVELVHNFSLLHDDV--MDGDTERRHRPTAWRLFGTPAA 118

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---ID 173
           I+AG+ LLT A E++ S   +  +               +  ++ GQ  DI+ E    + 
Sbjct: 119 ILAGDALLTLAMEVLDSVGERSANQRL---------AAAVHRLIEGQSADIEYESRTIVS 169

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             +   ++  KT +LM  + E GA++  A       L  FG NLG+ FQL DDLL  
Sbjct: 170 VEECLDMEDGKTASLMACSAELGALLGGADDRTVAALGDFGRNLGMGFQLVDDLLGI 226


>gi|195452852|ref|XP_002073528.1| GK13098 [Drosophila willistoni]
 gi|194169613|gb|EDW84514.1| GK13098 [Drosophila willistoni]
          Length = 449

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 25/235 (10%)

Query: 19  ILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN---- 68
           ILDD L      ++           L +   Y   G GK +R  +    A   N +    
Sbjct: 129 ILDDELKYFYDDVRDLLQSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 188

Query: 69  ----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    ++    E +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L
Sbjct: 189 SHQLVHKQRQIALFSEMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYIL 246

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + A  +I+  ++     + S+++  L     +      Q+   + E             K
Sbjct: 247 SIASIMIARLRSDDVTIVLSKILTDLVQGEFM------QLGSRETENERFAHYLTKTYRK 300

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T +L+  A ++ A++A A  N  E    +G N+G+ FQL DD+LD     E + K
Sbjct: 301 TASLIANALKATAVIAQADDNVAELAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 355


>gi|154508652|ref|ZP_02044294.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798286|gb|EDN80706.1| hypothetical protein ACTODO_01153 [Actinomyces odontolyticus ATCC
           17982]
          Length = 337

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 27/236 (11%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
            L S++    + ++  L D +        +   D      R+ A+ GGK++R  L   CA
Sbjct: 12  DLESRITPGLEVVERRLLDAV--------SSSRDLTDELTRHLAVAGGKRMRPLLTLVCA 63

Query: 63  SLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            L           +    A+E  H  SL HDD+  MD+   RRG P+    +    AI+A
Sbjct: 64  QLGEPERALDEQVITAATAVELTHLASLYHDDV--MDSAPTRRGVPSAQHLWGNNRAILA 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--- 176
           G+ L   A  +++S   ++  +          H    + +  GQ+ +         +   
Sbjct: 122 GDILFARASLLVASLGPEMVAH----------HARTFERLCEGQLNETFGPTDGADRVDF 171

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +   KTG+L+  A   GA+++ A +   + +  FGE +G+ FQ+ADD+LD   
Sbjct: 172 YLQVLADKTGSLVSTAASFGALLSGAGKLMADVVSDFGEKVGVAFQIADDVLDLAS 227


>gi|313632621|gb|EFR99606.1| heptaprenyl diphosphate synthase component II [Listeria seeligeri
           FSL N1-067]
          Length = 324

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 9   LYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62

Query: 65  FN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 63  VPTADFEMVRDASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 121 FAKSLEYMTEIK-----DVAAHKMLSNVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G I++  S+++ E+L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 175 KTALLIAASCGLGGIVSGQSESDYEKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230


>gi|16803969|ref|NP_465454.1| hypothetical protein lmo1930 [Listeria monocytogenes EGD-e]
 gi|224501271|ref|ZP_03669578.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes FSL R2-561]
 gi|254827185|ref|ZP_05231872.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           N3-165]
 gi|254831469|ref|ZP_05236124.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes 10403S]
 gi|254899373|ref|ZP_05259297.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes J0161]
 gi|254912488|ref|ZP_05262500.1| heptaprenyl diphosphate syntase component II [Listeria
           monocytogenes J2818]
 gi|254936815|ref|ZP_05268512.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900]
 gi|255025694|ref|ZP_05297680.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes FSL J2-003]
 gi|16411383|emb|CAD00008.1| lmo1930 [Listeria monocytogenes EGD-e]
 gi|258599568|gb|EEW12893.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           N3-165]
 gi|258609410|gb|EEW22018.1| heptaprenyl diphosphate synthase [Listeria monocytogenes F6900]
 gi|293590470|gb|EFF98804.1| heptaprenyl diphosphate syntase component II [Listeria
           monocytogenes J2818]
          Length = 321

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 60  AANADFNAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 172 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|217963918|ref|YP_002349596.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes HCC23]
 gi|217333188|gb|ACK38982.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes HCC23]
 gi|307571512|emb|CAR84691.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes L99]
          Length = 321

 Score =  154 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 60  APNADFDAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 172 KTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|315926233|ref|ZP_07922432.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315620493|gb|EFV00475.1| heptaprenyl diphosphate synthase component II [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 335

 Score =  154 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/186 (31%), Positives = 85/186 (45%), Gaps = 11/186 (5%)

Query: 50  GKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK +R  L+  CASL    + +   A+ + A +E IH  SLIHDD+  +D+   RRGKP 
Sbjct: 54  GKMLRPRLLLLCASLGPAWHAHQREAVELAAMVELIHLASLIHDDI--IDDARFRRGKPA 111

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  +Y +  A+ AG+ ++                 I ++ +  +           GQ   
Sbjct: 112 IQSRYGKDAAVYAGDFIMARVNYYQLKDGLNAPGAILAEAIEKMCAGEI------GQARL 165

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                  +   F   K KTGAL   AC  GA+    +    E+L  FGE LGI+FQL DD
Sbjct: 166 RHRPDATQAMYFENIKGKTGALFAAACRIGAMTGGCAPEAIEQLARFGELLGILFQLRDD 225

Query: 227 LLDCEE 232
           LLD   
Sbjct: 226 LLDFTA 231


>gi|313607945|gb|EFR84079.1| heptaprenyl diphosphate synthase component II [Listeria
           monocytogenes FSL F2-208]
          Length = 324

 Score =  154 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 9   LYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 63  APNADFDAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 121 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 175 KTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGK 230


>gi|315271298|gb|ACO46812.2| putative octaprenyl-diphosphate synthase [Deinococcus deserti
           VCD115]
          Length = 324

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 94/229 (41%), Gaps = 25/229 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---- 69
              +T L ++L      ++   +D + +       GGK+ R  +    A    V      
Sbjct: 12  AAFETRLREVLRSRVEFIELIGDDLVAA-------GGKRTRPMITLLAAQALGVGPGSSQ 64

Query: 70  -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +G  +E +H  SL+HDDL  +D+   RRG+     ++  V ++++G+ +L    
Sbjct: 65  WPEVIDLGVCVELLHSASLLHDDL--IDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLL 122

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKT 185
            +++   +           L+         +  G++L  Q              I   KT
Sbjct: 123 TLLAGMPSGTA--------LTRAFGETASQICEGEVLQFQVAAYADYGLEHYLNIIHGKT 174

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            AL   A  + A++  +S+ ++E L  FG   G+ FQ+ DDLLD   + 
Sbjct: 175 AALTELAACAPAMLLGSSEAQREALATFGREYGLAFQMQDDLLDLAGEE 223


>gi|226227273|ref|YP_002761379.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27]
 gi|226090464|dbj|BAH38909.1| geranyltranstransferase [Gemmatimonas aurantiaca T-27]
          Length = 307

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 6/220 (2%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVG 76
             +   L        +        A+RYALLG GK++R+ L+ E           A  + 
Sbjct: 23  AAIQHALDGVCRRWLSALAPATAEAVRYALLGEGKRLRAILLIEAYRACGGTGDAA-DLA 81

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSP 134
           A+IE +H YSL+HDDLP MD+  +RRG+PTVH  +    A  AG  ++  A      +S 
Sbjct: 82  ASIEVVHAYSLVHDDLPCMDDDDMRRGRPTVHKVHGVGVATAAGLAMVPLAARSAWHASK 141

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
              L D +   ++  L    G  GM+GGQ+LD++ E   +    +  + ++KTGAL+  +
Sbjct: 142 ALGLSDVVAGDIVRELMEASGGGGMIGGQLLDLEAEGAPLSLESLERVHRLKTGALIRAS 201

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              GA  A A +  +  L  +G ++G+ FQ+ADD+LD   
Sbjct: 202 VTLGARAALAPEARRHALDRYGASIGLAFQIADDVLDVTA 241


>gi|28377861|ref|NP_784753.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum WCFS1]
 gi|300767848|ref|ZP_07077758.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308180038|ref|YP_003924166.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270694|emb|CAD63600.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum WCFS1]
 gi|300494833|gb|EFK29991.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308045529|gb|ADN98072.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 330

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 10/211 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
            L+    +      ND +L  I     GGK +R       +     +    + + A++E 
Sbjct: 26  QLMTANINIQDADINDAILEMIH---GGGKLLRPAYCLLFSQFTTTDRQRMVALAASLET 82

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  +LIHDD+  +D+  +RR   T+  ++ + TA+ AG+ L    F+I++   +  K  
Sbjct: 83  LHTATLIHDDI--VDDAALRRHHVTIQERFGKDTAVYAGDYLFVVVFKILAHYSSSFK-- 138

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
             S  M S      L G +  Q        I   +     + KT  L   +C  GA  + 
Sbjct: 139 --SIQMNSENMEKILVGEV-QQKDRHYHLDITMAEYLQQIQGKTAELFALSCFLGAYESG 195

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            S +  +R R  G  +G+ FQ+ DD+LD +E
Sbjct: 196 QSSHFAQRARKAGLAIGMAFQILDDILDYQE 226


>gi|328774161|gb|EGF84198.1| hypothetical protein BATDEDRAFT_29284 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 356

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 87/220 (39%), Gaps = 30/220 (13%)

Query: 45  YALLGGKKIRSFLVTECASL------------FNVNHLTALRVGAAI----------ECI 82
           Y    GK IR  +V   A              F  +  T L     +          E I
Sbjct: 45  YFSKQGKHIRPLVVLLMAQATSITAKMPGSDPFTNSGATILPEAVILPTQRRLAEITEMI 104

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+HDD+  +D    RR  P+V+ ++    AI+AG+ LL  A   ++  +      +
Sbjct: 105 HTASLLHDDV--IDISMTRRNTPSVNAEFGNKMAILAGDFLLARASVALARLRDPRVVEL 162

Query: 143 RSQLMLSLTHNIGLQ---GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            S ++ +L     +Q     LGG                    MKT +L+  +C S A++
Sbjct: 163 LSTVISNLVEGEFMQLRNSALGGSKSAYSAVHDRFQYYMEKTYMKTASLIAISCRSSAVL 222

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
              + +  E    +G NLG+ FQL DD++D      D  K
Sbjct: 223 GGCTDDVIESAYLYGRNLGLAFQLVDDMMDFTVSSADFGK 262


>gi|329938270|ref|ZP_08287721.1| putative polyprenyl diphosphate synthase [Streptomyces
           griseoaurantiacus M045]
 gi|329302759|gb|EGG46649.1| putative polyprenyl diphosphate synthase [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 11/187 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +  +A+    A+E +H ++L+HDD+  +D   +RR +P   
Sbjct: 62  GGKSVRPALTLLSAMAVGGSAESAVPGAVAVELVHDFTLLHDDV--IDGDDLRRHRPAAW 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ LL  A  +++  + Q       +L+        L  ++ GQ  D+ 
Sbjct: 120 SVFGTPAAVLTGDALLVAAMRVLTDTQQQRMAVAVKELV------DALLELVEGQSRDVA 173

Query: 169 DEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   E    Q   + + KTG+LM  A   G ++A A +     LR FG  LG+ FQ AD
Sbjct: 174 YEKAPEVSVAQYLAMAEGKTGSLMGCAAALGGVLAGADEVRVRGLREFGRRLGVAFQCAD 233

Query: 226 DLLDCEE 232
           D+L    
Sbjct: 234 DVLGIWG 240


>gi|111220885|ref|YP_711679.1| geranylgeranyl pyrophosphate synthetase [Frankia alni ACN14a]
 gi|111148417|emb|CAJ60089.1| geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
           (GGPPSASE) (Geranylgeranyl diphosphate synthase)
           [Includes: Dimethylallyltranstransferase;
           Geranyltranstransferase; Farnesyltranstransferase]
           [Frankia alni ACN14a]
          Length = 338

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR +PT  
Sbjct: 53  GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + +     R+ L+L      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVL--LEVEGDAARRAALIL----GAGVQDLVRGQAEDLM 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     ++  KTGAL+  +   GA++A A     + L  +G  LG  FQL D
Sbjct: 165 FESRSDVTVADTLRMEDGKTGALLACSASLGAVLAGAGDEMVDALAEYGSRLGTAFQLID 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|29827670|ref|NP_822304.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29604770|dbj|BAC68839.1| putative polyprenyl diphosphate synthase [Streptomyces avermitilis
           MA-4680]
          Length = 344

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 3/184 (1%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A          +    A+E +H +SL+HDD+  MD   +RRG+P +  
Sbjct: 63  GKGVRQALAVLGAEAAGGPAEAGVPAAVAVELVHTFSLLHDDI--MDGDAMRRGRPALWK 120

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ L   A + +++       +  S  +  L        +L         
Sbjct: 121 AYGTGPAVLAGDALFALAVQTLTTASAPGAAHRLSAALGDLVRGQA-DDLLFAHRPWTGP 179

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           E +   +   + + KTG+L+  A   GA +A A +     L   G +LG+ FQ+ DDLL 
Sbjct: 180 EAVSVAEYEAMAEHKTGSLLGCALALGAHLAGAPEETAAVLDRTGRHLGVAFQIVDDLLG 239

Query: 230 CEED 233
              D
Sbjct: 240 IWGD 243


>gi|46447630|ref|YP_008995.1| putative geranyltranstransferase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46401271|emb|CAF24720.1| putative geranyltranstransferase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 269

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 12/206 (5%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L  A  YALL GGK+ R  LV   A         + +    +E  H  SLI DDLP MDN
Sbjct: 7   LRDACEYALLNGGKRFRPALVLMIAKALGFQVDVS-QAALCVEYFHTASLIADDLPCMDN 65

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR----------SQLM 147
              RR  PT+H  + E T+++A   L+   +  ++     LKD+               +
Sbjct: 66  DDERRNAPTLHKIFGESTSLLATYTLIAAGYACLARNTAILKDSAHPYVNQKERLCVLAL 125

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
            + T N G+ G  GGQ LD+    +    +  + + KT  L   +   G I       + 
Sbjct: 126 ENATQNTGILGATGGQYLDLNPPNLSLKTLKEVIEKKTVTLFEISFVLGWIFGGGVLEKL 185

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             ++    + G+ FQ+ADDL D ++D
Sbjct: 186 SLVKKCAGHFGMAFQIADDLGDMKQD 211


>gi|309792042|ref|ZP_07686518.1| Polyprenyl synthetase [Oscillochloris trichoides DG6]
 gi|308225935|gb|EFO79687.1| Polyprenyl synthetase [Oscillochloris trichoides DG6]
          Length = 347

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 10/235 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   + + ++    + +  +         H+  +    + S        GK IR  LV  
Sbjct: 10  MRLRIQAAMRAAFPQAEDRVARFYAMQEYHLGWRDEQLVASESD----PGKLIRPQLVLL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                  +   A+ + A I+ +H ++LIHDD+   D+  +RRG+PT+   +     I AG
Sbjct: 66  ACQAAGGDPALAMPLAAGIQLLHDFTLIHDDIE--DDSDMRRGRPTLWHLWGLAQGINAG 123

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQV 177
           +G+   A   I           R   +L     + L  +  GQ LDI  E    I     
Sbjct: 124 DGMFVIAHLAIHQLSDLGVPAERVLPILRRFDEVILH-VCEGQFLDISFEGNLGISTEDY 182

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KT  L+  +   GA++A A       L  FG +LG+ FQ+ DD+L    
Sbjct: 183 LAMIGRKTAILIDGSAALGAMVAGADAATVAALSTFGRSLGLAFQIEDDILGIWG 237


>gi|260799431|ref|XP_002594699.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae]
 gi|229279935|gb|EEN50710.1| hypothetical protein BRAFLDRAFT_240460 [Branchiostoma floridae]
          Length = 328

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 18/208 (8%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA---------LRVGAAIECIHC 84
           +   L     Y   G GK  R  +V   +   N +H  A          R+    E IH 
Sbjct: 28  YGSLLRDMSHYYFDGQGKAFRPMVVLLMSRACNFHHGAAENSLALPSQRRISMIAEMIHT 87

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+HDD+  +D    RRGK  V   + +  AI+ G+ +LT +   +++   +    + S
Sbjct: 88  ASLVHDDV--IDEADTRRGKACVSYLHGQRKAILTGDYILTVSSMALAAIGNKDVVILLS 145

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           Q++  L     +      Q+   +DE             KT +L+  +C + A+++ +S+
Sbjct: 146 QVIEDLVRGEFM------QLGTKEDEDERFAHYLKKTFKKTASLLAHSCRAVAVLSGSSK 199

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +E    +G+NLGI FQL DD+LD   
Sbjct: 200 DVQEVAYQYGKNLGIAFQLVDDMLDFMS 227


>gi|283955963|ref|ZP_06373453.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792623|gb|EFC31402.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 297

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLQELGYEPILN--------MLSNVKSGKKLRSKLLLAIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 M------DARFASIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|239928074|ref|ZP_04685027.1| putative polyprenyl diphosphate synthase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 341

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 21/234 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L  +L E  + ++  L +   + A          L         GGK++R  LV   
Sbjct: 20  DPALRDRLAERLRTVERRLQERAARAADPRVAPLVGHL------VTTGGKRLRPLLVLLG 73

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +      E +H  SL HDD+  +D+  IR G  + + ++    A+ AG+
Sbjct: 74  AEFGDPEGEGVVDAAVLAELVHVSSLYHDDV--IDDAGIRHGADSANARWGNRRAVFAGD 131

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            LL  A ++  +   +              + +    ++ GQ L++              
Sbjct: 132 WLLAQAAQLSCALGPRAV----------RLNAVTADRLVRGQALELLGPGPGTAPLDHYL 181

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   K+ +L+  + + GA+ A A +   + L  +GE LG+ FQ++DD+LD   
Sbjct: 182 RVTAGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGLAFQMSDDILDITS 235


>gi|290957483|ref|YP_003488665.1| polyprenyl diphosphate synthase [Streptomyces scabiei 87.22]
 gi|260647009|emb|CBG70108.1| putative polyprenyl diphosphate synthase [Streptomyces scabiei
           87.22]
          Length = 409

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV             A+R  AA+E +H ++L+HDD+  MD    RR + T   
Sbjct: 125 GKAIRPALVLAAVHALGGRESVAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRATAWT 182

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AI+AG+ +   A  +++           ++L         +  +  GQ  D + 
Sbjct: 183 VFGVPDAILAGDAMQALAQRLLAEDPHPASAAAAARL------ASCVVELCEGQHTDTEL 236

Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +V  + + KTGAL+  AC  GA+ A A++ + E L  FG   G+ FQL 
Sbjct: 237 EGRPPLDVTLDEVLTMAEAKTGALLGCACAIGALYAGAAEEDVEALDAFGREAGLAFQLI 296

Query: 225 DDLLDCEED 233
           DD++    D
Sbjct: 297 DDVIGIWGD 305


>gi|118431580|ref|NP_148152.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1]
 gi|116062905|dbj|BAA80767.2| farnesylgeranyl diphosphate synthase [Aeropyrum pernix K1]
          Length = 332

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 13/232 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L E S R   ++D  ++   S       DRL  A  + +  GGK++R  +    A +  
Sbjct: 5   RLFEASSRYSMLIDHYIMDFMSI----TPDRLSGASLHLIKAGGKRLRPLITLLTARMLG 60

Query: 67  V--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                  A+ + A+IE  H +SLIHDD+  MD   +RRG PT H+ Y +  AI+AG+ L 
Sbjct: 61  GLEAEARAIPLAASIETAHTFSLIHDDI--MDRDEVRRGVPTTHVVYGDDWAILAGDTLH 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQ 181
             AF++I+  +     + ++     +     +Q +  GQ  D+  E    +D      + 
Sbjct: 119 AAAFKMIADSREWGMSHEQAYRAFKVLSEAAIQ-ISRGQAYDMLFEETWDVDVADYLNMV 177

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           ++KTGAL+  A   GA+ A A    ++ +   G N GI FQ+ DD+L    D
Sbjct: 178 RLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGD 229


>gi|99035065|ref|ZP_01314856.1| hypothetical protein Wendoof_01000303 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 335

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/152 (44%), Positives = 96/152 (63%), Gaps = 6/152 (3%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10  LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP MDN   RR + + H ++DE TA++AG+ LLT AFE++SS      + 
Sbjct: 70  VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSL-----NE 124

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
            R +++  L+  IG++GM+GGQ LDI  E ID
Sbjct: 125 KRCEIIKVLSQAIGIRGMVGGQALDINSEHID 156



 Score = 85.6 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 39/72 (54%)

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           G M D         ++  I  MKT  L   +CE GAI+  A+  +++ L  +G NLG+IF
Sbjct: 214 GCMYDAGMTSGQADKIKEIHLMKTAKLFAASCEIGAIIGGATDKQRKALYNYGINLGLIF 273

Query: 222 QLADDLLDCEED 233
           Q  DD+ D E+D
Sbjct: 274 QAKDDIEDYEQD 285


>gi|56698924|gb|AAW23160.1| geranylgeranyl pyrophosphate synthase [Rhodococcus erythropolis]
          Length = 379

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 34/246 (13%)

Query: 16  IDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--- 69
            +  L D      +  S++   +   + +   + L GGK++R             +    
Sbjct: 32  FEGALRDFFDSRRELVSNIGGGYEKAVSTLEAFVLRGGKRVRPSFAWTGWLGAGGDPNGS 91

Query: 70  --LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------------- 111
                +R  AA+E +   +L+HDD+  +D    RRG PTVH+++                
Sbjct: 92  GADAVIRACAALELVQACALVHDDI--IDASTTRRGFPTVHVEFEDQHRGEEWSGDSAHF 149

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
            E  AI+ G+  L +A ++I           R   + S         +LGGQ LDI +E 
Sbjct: 150 GEAVAILLGDLALAWADDMIRESGISPDAAARVSPVWSAMRT----EVLGGQFLDISNEA 205

Query: 172 IDETQVF---MIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             +  V     + + KT A  +      GA +  A     +  R FG ++GI FQL DDL
Sbjct: 206 RGDETVEAAMRVNRYKTAAYTIERPLHLGAALFGADAELIDAYRTFGTDIGIAFQLRDDL 265

Query: 228 LDCEED 233
           L    D
Sbjct: 266 LGVFGD 271


>gi|313891223|ref|ZP_07824842.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120586|gb|EFR43706.1| polyprenyl synthetase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 326

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 13/215 (6%)

Query: 28  ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHC 84
              +Q ++ D   + ++ A  GGK +R        S       N     ++ A++E +H 
Sbjct: 23  EKRVQARNTDIQEAIVQLAQAGGKYLRPAFFFLFTSFGQREKQNSEQLTKIAASLEILHM 82

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +LIHDD+  +D+  +RRG+ T+  Q+ +  A+  G+ L T  FE+I             
Sbjct: 83  ATLIHDDV--IDDSPLRRGQVTIQTQFGKDIAVYTGDFLFTIFFELILETMQDSP----Y 136

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             + +      L G L  QM    ++             KT  L   A   GA    AS 
Sbjct: 137 MKVNAKAMKKILVGEL-DQMHLYFNQKQSIRDYLRSISGKTAELFRLASSEGAYFGGASP 195

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
               +    G ++G+ FQ+ DD+LD      D  K
Sbjct: 196 EVVSKAGRIGYHIGMTFQILDDILDYTAKEKDFNK 230


>gi|86151722|ref|ZP_01069936.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85841351|gb|EAQ58599.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 260.94]
          Length = 297

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLEELGYEPILN--------MLSNVKSGKKLRSKLLLAIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 L------DARFASIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|315640540|ref|ZP_07895648.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus
           DSM 15952]
 gi|315483744|gb|EFU74232.1| putative trans-hexaprenyltranstransferase [Enterococcus italicus
           DSM 15952]
          Length = 326

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 16/211 (7%)

Query: 28  ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHC 84
              +  ++ D   + + ++  GGK +R       A L +    N    ++V ++IE +H 
Sbjct: 23  EKQLTVRNKDIQDALVEFSQAGGKYLRPAFFFLFAELGDPKKQNEEELIKVASSIELLHM 82

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +LIHDD+  +D+  +RRG  TV   Y +  A+  G+ L T  FE++             
Sbjct: 83  ATLIHDDI--IDDSPLRRGTLTVQAHYGKDIAVYTGDLLFTLFFEVLIDVMNGSPFMA-- 138

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAH 201
                 T+   ++G+L G++  +   +          +    KT  L   AC  GA    
Sbjct: 139 ------TNAQAMKGLLLGELDQMNLRYNVNQTIDDYLLSVNGKTAELFWLACLEGAHFGK 192

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            S   +      G N+GI FQ  DD+LD   
Sbjct: 193 TSPQIEALAGEIGRNIGIAFQAYDDILDYTA 223


>gi|260662978|ref|ZP_05863871.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260552599|gb|EEX25599.1| polyprenyl synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 327

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 12/202 (5%)

Query: 36  NDRLLSAI-RYALLGGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHD 90
           + +L SA+ + A  GGK +R       ASL            +++  +IE +H  +LIHD
Sbjct: 31  DGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVLHMATLIHD 90

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +D+   RRG+ ++  ++ +  A+ +G+ L T  F++I++          +  ++  
Sbjct: 91  DI--IDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLTTNAQIMHR 148

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                L G L GQM D   +             KT AL   A   GA    A Q      
Sbjct: 149 ----ILSGEL-GQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQRTVALA 203

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
           +  G+N+GI FQ+ DD+LD   
Sbjct: 204 KRIGQNVGIAFQILDDILDYSS 225


>gi|260585122|ref|ZP_05852863.1| heptaprenyl diphosphate synthase component II [Granulicatella
           elegans ATCC 700633]
 gi|260157210|gb|EEW92285.1| heptaprenyl diphosphate synthase component II [Granulicatella
           elegans ATCC 700633]
          Length = 325

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 20/210 (9%)

Query: 35  HNDRLLSAI-RYALLGGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDL 92
            ++ +  AI      GGK IR   +T  A+  N  N      V AA+E +H  +L+HDD+
Sbjct: 32  EDEDIHQAIVEMLQQGGKMIRPAYLTLFANWSNNGNPQQVRAVAAALELLHVATLLHDDV 91

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D   +RRG+ T++ +Y    AI AG+ +LT  ++++S+  + L      + +   T+
Sbjct: 92  --IDEADMRRGQETLNARYGNRVAIYAGDFVLTSCYQLLSTHLSDL------EGITLPTN 143

Query: 153 NIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
             G+  ++ G++  +++ +   +   +     + KT  L   +C  GA +       + +
Sbjct: 144 --GMARVVEGELAQMRNRYRYDLGLQEYLKRIEGKTAQLFMVSCYMGAKLGQMDDALRAK 201

Query: 210 LRCFGENLGIIFQLADDLLDCE---EDLPK 236
               G+ +G+ FQ+ DD+LD +   ++  K
Sbjct: 202 --KIGQQIGMAFQILDDILDYQVTPQEFGK 229


>gi|88596918|ref|ZP_01100154.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|88190607|gb|EAQ94580.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 84-25]
          Length = 297

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLEELGYEPILN--------MLSNVKSGKKLRSKLLLAIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 M------DARFASIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|195575272|ref|XP_002105603.1| GD16491 [Drosophila simulans]
 gi|194201530|gb|EDX15106.1| GD16491 [Drosophila simulans]
          Length = 461

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCY 85
               L +   Y   G GK +R  +    A   N +             ++    E +H  
Sbjct: 137 SQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSA 196

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++     + SQ
Sbjct: 197 SLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQ 254

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++  L     +      Q+   + E             KT +L+  A ++ A++A A  N
Sbjct: 255 ILTDLVQGEFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 308

Query: 206 EKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             E    +G N+G+ FQL DD+LD     E + K
Sbjct: 309 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 342


>gi|260799425|ref|XP_002594697.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae]
 gi|229279933|gb|EEN50708.1| hypothetical protein BRAFLDRAFT_240454 [Branchiostoma floridae]
          Length = 328

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 18/208 (8%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTA---------LRVGAAIECIHC 84
           +   L     Y   G GK  R  +V   +   N ++  A          R+    E IH 
Sbjct: 28  YGTILRDMSHYYFDGQGKAFRPMVVLLMSRACNFHNGAAENSLALPSQRRISMIAEMIHT 87

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+HDD+  +D    RRGK  V   + +  AI+ G+ +LT +   +++   +    + S
Sbjct: 88  ASLVHDDV--IDEADTRRGKACVSYLHGQRKAILTGDYILTVSSMALAAIGNKDVVILLS 145

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           Q++  L     +      Q+   +DE             KT +L+  +C + A+++ +S+
Sbjct: 146 QVIEDLVRGEFM------QLGTKEDEDERFAHYLKKTFKKTASLLAHSCRAVAVLSGSSK 199

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +E    +G+NLGI FQL DD+LD   
Sbjct: 200 DVQEVAYQYGKNLGIAFQLVDDMLDFMS 227


>gi|42520989|ref|NP_966904.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410730|gb|AAS14838.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 335

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/152 (44%), Positives = 96/152 (63%), Gaps = 6/152 (3%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10  LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSLIHDDLP MDN   RR + + H ++DE TA++AG+ LLT AFE++SS      + 
Sbjct: 70  VHAYSLIHDDLPCMDNSDTRRSQLSCHKKFDEATAVLAGDALLTLAFEVLSSL-----NE 124

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
            R +++  L+  IG++GM+GGQ LDI  E ID
Sbjct: 125 KRCEIIKVLSQAIGIRGMVGGQALDINSEHID 156



 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 10/109 (9%)

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
           + A   + S  + L D + +  +      +   GM  GQ            ++  I  MK
Sbjct: 187 SGAEHEMDSSVSYLHDTLSTLKLQHSYDCMYDAGMTSGQA----------DKIKEIHLMK 236

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T  L   +CE GAI+  A+  +++ L  +G NLG+IFQ  DD+ D E+D
Sbjct: 237 TAKLFAASCEIGAIIGGATDKQRKALYNYGINLGLIFQAKDDIEDYEQD 285


>gi|227488516|ref|ZP_03918832.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227543121|ref|ZP_03973170.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227091410|gb|EEI26722.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227181109|gb|EEI62081.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 358

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 35/255 (13%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIR-YALLGGKKIRSFLVTECASL 64
           +L      +   L + L     H+     H D    A+  + + GGK++R          
Sbjct: 4   ELASVQAGVTKNLQEFLASHRPHVSAIGSHVDVASEALSDFVVSGGKRVRPLYAWAGYVG 63

Query: 65  FNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------- 111
              +       R  +++E I   +LIHDD+  +D    RRG PTVH +            
Sbjct: 64  GGGDESNTAVQRACSSLEFIQACALIHDDI--IDASDTRRGNPTVHRRMETYLRDYPGFS 121

Query: 112 ---------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                        AI+ G+  L +A ++      +L D +R++       N     ++GG
Sbjct: 122 GPTERAAEFGTSVAILIGDLALVWAEDMFMESGVELSDLMRAR----PAWNAMRAEVIGG 177

Query: 163 QMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           Q+LDI  E +    E     +   KT    +    + G ++A    +  E    +G NLG
Sbjct: 178 QILDISAEAVGETSEDTARRVNIYKTASYTITRPLQIGGLLAGVDDSTLEAFAGYGRNLG 237

Query: 219 IIFQLADDLLDCEED 233
           I FQL DDLL    D
Sbjct: 238 IAFQLRDDLLGVFGD 252


>gi|42527045|ref|NP_972143.1| polyprenyl synthetase family protein [Treponema denticola ATCC
           35405]
 gi|41817469|gb|AAS12054.1| polyprenyl synthetase family protein [Treponema denticola ATCC
           35405]
          Length = 350

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 26/250 (10%)

Query: 8   KLQENSKRIDTILDDLLLQT-------------ASHMQTQHNDRLLSAIRYAL-LGGKKI 53
           +L+   + I+  LD  L +              A  +       +++ +R  +  GGK+ 
Sbjct: 9   ELKNRLEHIEKTLDCFLPEKINSSWISQSFGELAYSLPDSFFLNIINPVRDLVKRGGKRW 68

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           R  L      L   +   A  +   IE  H  SL+HDD+   D    RRG P  HI+Y  
Sbjct: 69  RPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIE--DKSDTRRGAPAAHIKYGL 126

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
            TA+ + + L   A   +     ++ +++R+ +    + N  L+ +  GQ +DI      
Sbjct: 127 DTALNSASWLYFEALNPL--INYEVSESVRAVIYSLYSQN--LRRLHLGQSMDIGWHSNS 182

Query: 174 E-----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +      +   +  +KTG+L   A E G I A    NE         ++GI FQ+ DD+ 
Sbjct: 183 DIIPSVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMGIGFQILDDVK 242

Query: 229 DC-EEDLPKK 237
           +  E +  K+
Sbjct: 243 NITEGNAGKR 252


>gi|184155577|ref|YP_001843917.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956]
 gi|227514942|ref|ZP_03944991.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC
           14931]
 gi|183226921|dbj|BAG27437.1| polyprenyl synthase [Lactobacillus fermentum IFO 3956]
 gi|227086706|gb|EEI22018.1| trans-hexaprenyltranstransferase [Lactobacillus fermentum ATCC
           14931]
          Length = 328

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 12/202 (5%)

Query: 36  NDRLLSAI-RYALLGGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHD 90
           + +L SA+ + A  GGK +R       ASL            +++  +IE +H  +LIHD
Sbjct: 32  DGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVLHMATLIHD 91

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +D+   RRG+ ++  ++ +  A+ +G+ L T  F++I++          +  ++  
Sbjct: 92  DI--IDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLTTNAQIMHR 149

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                L G L GQM D   +             KT AL   A   GA    A Q      
Sbjct: 150 ----ILSGEL-GQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQRTVALA 204

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
           +  G+N+GI FQ+ DD+LD   
Sbjct: 205 KRIGQNVGIAFQILDDILDYSS 226


>gi|86149236|ref|ZP_01067468.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|121612193|ref|YP_001000241.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005197|ref|ZP_02270955.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|218562193|ref|YP_002343972.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|85840594|gb|EAQ57851.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|87250330|gb|EAQ73288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|112359899|emb|CAL34687.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315927039|gb|EFV06394.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315929574|gb|EFV08762.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 297

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLQELGYEPILN--------MLSNVKSGKKLRSKLLLAIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 M------DARFASIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|271968156|ref|YP_003342352.1| geranylgeranyl pyrophosphate synthase-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270511331|gb|ACZ89609.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 346

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR  LV   A +       AL    A+E  H +SL+HDD+  MD    RR +PT  
Sbjct: 61  GGKAIRPALVLLAAEVVGGGAAAALPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAW 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LLT AF+++++               +   +  +Q +L GQ  D+ 
Sbjct: 119 TVFGVSPAILAGDALLTLAFDVLAAGGHPATPRA------ARIFSAAIQELLEGQHTDVA 172

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   + ++     +   KTGAL+  AC  GA+    S  + E L  FG +LG+ FQ  D
Sbjct: 173 FERRQDVELAECLSMAAGKTGALLGCACALGALFGGGSLAQVEHLHAFGRDLGLAFQFVD 232

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 233 DLLGIWGD 240


>gi|86153438|ref|ZP_01071642.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843164|gb|EAQ60375.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 297

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLQELGYEPILN--------MLSNVKSGKKLRSKLLLAIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYKLSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 M------DARFASIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|291436410|ref|ZP_06575800.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC
           14672]
 gi|291339305|gb|EFE66261.1| trans-hexaprenyltranstransferase [Streptomyces ghanaensis ATCC
           14672]
          Length = 338

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 21/234 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L  +L E  + ++  L +   + A          L         GGK++R  LV   
Sbjct: 17  DPALRDRLAERLRTVERRLQERAARAADPRVAPLVGHL------VTTGGKRLRPLLVLLG 70

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A   +      +      E +H  SL HDD+  +D+  IR G  + + ++    A+ AG+
Sbjct: 71  AEFGDPEGEGVVDAAVLAELVHVSSLYHDDV--IDDAGIRHGADSANARWGNRRAVFAGD 128

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVF 178
            LL  A ++  +   +              + +    ++ GQ L++              
Sbjct: 129 WLLAQAAQLSCALGPRAV----------RLNAVTADRLVRGQALELLGPGPGTAPLDHYL 178

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   K+ +L+  + + GA+ A A +   + L  +GE LG+ FQ++DD+LD   
Sbjct: 179 RVTAGKSASLIVLSLQLGALQAGAPEAYADVLAEYGEQLGLAFQMSDDILDITS 232


>gi|331004838|ref|ZP_08328256.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
 gi|330421369|gb|EGG95617.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
          Length = 321

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 11/176 (6%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                      + A IE IH  +L+HDD+  M    +RRG+ T + ++    +++ G+ L
Sbjct: 57  ALQYQGDKHHDLAAIIEFIHSATLLHDDVVDM--SDLRRGRLTANAKWGNAPSVLVGDFL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            + AF+++ +       ++    +LS T N+  +G +  Q+++ +   I E   F +   
Sbjct: 115 YSRAFQMMVAVG-----DMSIMKILSDTTNLISEGEV-QQLINAKKPDISEKGYFEVIHK 168

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L   ACE+ A ++ A +  + +L  +G ++GI FQL DD LD      +L K
Sbjct: 169 KTAILFEAACETAATLSGAEETLRRQLTAYGYHVGIAFQLIDDALDYTGNTEELGK 224


>gi|299783324|gb|ADJ41322.1| Trans-hexaprenyltranstransferase [Lactobacillus fermentum CECT
           5716]
          Length = 328

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 12/202 (5%)

Query: 36  NDRLLSAI-RYALLGGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHD 90
           + +L SA+ + A  GGK +R       ASL            +++  +IE +H  +LIHD
Sbjct: 32  DGQLESALQKMATNGGKFLRPAFFWLFASLTGQPQPEQRDRLIKLATSIEVLHMATLIHD 91

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +D+   RRG+ ++  ++ +  A+ +G+ L T  F++I++          +  ++  
Sbjct: 92  DI--IDDSPERRGRISIQAEFGKDVAVYSGDYLFTIFFDLITTTTATTPFLTTNAQIMHR 149

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                L G L GQM D   +             KT AL   A   GA    A Q      
Sbjct: 150 ----ILSGEL-GQMADRFKQDQTFLSYLRNINGKTAALFSLAASEGAYFGGADQRTVALA 204

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
           +  G+N+GI FQ+ DD+LD   
Sbjct: 205 KRIGQNVGIAFQILDDILDYSS 226


>gi|237786435|ref|YP_002907140.1| putative polyprenyl diphosphate synthase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237759347|gb|ACR18597.1| putative polyprenyl diphosphate synthase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 355

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 22/235 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L S + +  ++ + +L   L Q AS +  +           AL GGK++R       
Sbjct: 36  DDELNSFVADGMEKCEKLLIRELDQGASFVTDKVK-------HLALAGGKRVRPMFALLA 88

Query: 62  ASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +           ++    +E  H  +L HDD+  MD    RRG  + + +++   AI+AG
Sbjct: 89  SRYGERPGCDDVIKAAIVVEMTHLATLYHDDV--MDEAEKRRGADSANFRWNNSVAILAG 146

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVF 178
           + +L+ A  +++S           + +   +   G   ++ GQM +       +      
Sbjct: 147 DFILSAASRLMASLG--------VKTVKHFSEAFG--DLVTGQMRETIGATSGDEIEHYL 196

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   KT  L+  A   GA+ A      ++ L  FGE+LG++FQ+ DD++D   D
Sbjct: 197 NVIHEKTAVLIRSAGFLGAMHAGTPAPIQQALATFGEHLGMVFQIVDDMIDIFSD 251


>gi|313144226|ref|ZP_07806419.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG
           18818]
 gi|313129257|gb|EFR46874.1| polyprenyl synthetase family protein [Helicobacter cinaedi CCUG
           18818]
          Length = 297

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +RI   +D  + +         ND +L+   + L  GK +RS L+   +         +L
Sbjct: 2   ERIKAYIDMYIKEC-------GNDEVLNLSSH-LSQGKMLRSKLLLAIS----GVSEDSL 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R  A IE I   SL+HDD+  +D    RR KP+++  +    AI+ G+ L + AF  +S 
Sbjct: 50  RACALIEMIQSASLLHDDV--IDEAQTRRQKPSINALFGNKNAIMLGDVLYSKAFYELSC 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
              +L  ++ S ++          G +    L  +   ID+     +   KT AL+  A 
Sbjct: 108 LDVRLAQSVSSAVVRL------SIGEIEDVSLASRFH-IDKQAYIKMCGNKTAALIVAAA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           E GAI+   ++N     R +GENLGI FQ+ DD+LD  +D  
Sbjct: 161 ECGAILKGLNKNI---YRIYGENLGIAFQIIDDILDFTQDSK 199


>gi|24651612|ref|NP_733425.1| CG31005 [Drosophila melanogaster]
 gi|23172761|gb|AAF57135.2| CG31005 [Drosophila melanogaster]
 gi|201065485|gb|ACH92152.1| FI02023p [Drosophila melanogaster]
          Length = 436

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCY 85
               L +   Y   G GK +R  +    A   N +             ++    E +H  
Sbjct: 137 SQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSA 196

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++     + SQ
Sbjct: 197 SLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQ 254

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++  L     +      Q+   + E             KT +L+  A ++ A++A A  N
Sbjct: 255 ILTDLVQGEFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 308

Query: 206 EKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             E    +G N+G+ FQL DD+LD     E + K
Sbjct: 309 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 342


>gi|157414822|ref|YP_001482078.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385786|gb|ABV52101.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747460|gb|ADN90730.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931736|gb|EFV10691.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 297

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLEELGYEPILN--------MLSNVKSGKKLRSKLLLAIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 M------DARFTSIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|315303877|ref|ZP_07874357.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii
           FSL F6-596]
 gi|313627753|gb|EFR96406.1| heptaprenyl diphosphate synthase component II [Listeria ivanovii
           FSL F6-596]
          Length = 324

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 9   LYANMQKDIDIVEKELKKALSGAAAETTSDAALHLLEA------GGKRIRPMFVCLSARL 62

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 63  SPNADFEMVRDASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     +I +  MLS        G +  Q+ D  +            K 
Sbjct: 121 FAKSLEYMTEIK-----DIAAHKMLSRVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G I++  SQ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 175 KTALLIAASCGLGGIVSGQSQADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230


>gi|315425225|dbj|BAJ46894.1| polyprenyl synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 353

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 78/194 (40%), Gaps = 13/194 (6%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK+ R  L                 + A  E IH  +LI DD+   D   +RRG+P +
Sbjct: 65  RGGKRWRPALTVIVYEALGGGDPGIYILAAVPEIIHNATLIVDDVE--DGSLMRRGEPCI 122

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  Y    AI AGN        + +    +L  N+ +  +        +  +  GQ +DI
Sbjct: 123 HRIYGIDIAINAGNAYYYIPAYLAAK---KLPKNMATLFLEKYVET--MTRLSLGQTMDI 177

Query: 168 QDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
                    I E     +   KTGAL  FA E  AI A    +  E L  FGE +G  FQ
Sbjct: 178 VWHRGLVTDITEEHYLQMAAFKTGALSRFAVELAAIYAG-RGDLLEELGRFGEAVGTAFQ 236

Query: 223 LADDLLDCEEDLPK 236
           + DD L+   D  +
Sbjct: 237 IQDDYLNIFGDEAR 250


>gi|302336334|ref|YP_003801541.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Olsenella uli DSM 7084]
 gi|301320174|gb|ADK68661.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Olsenella uli DSM 7084]
          Length = 355

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 89/238 (37%), Gaps = 11/238 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSA-IRYALLGGKKIRSFLVT 59
              + L E    I+  L +         +   +     L     R+   GGK+ R  LV 
Sbjct: 15  AFATYLAERRPIIEAYLAEHKPTPPPDETSADSDLERYLYQPFARFVASGGKRTRPALVL 74

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                   +   AL   A IE     +LIHDD+   D G +RRG+P  ++      AI  
Sbjct: 75  LGCEAVGGDVERALSSAAGIEHFQSAALIHDDIA--DEGELRRGEPCTYLTEGLGVAINT 132

Query: 120 GNGLLTYAF-EIISSPKTQLKDNIRSQLMLSLTHNIGLQGML--GGQMLDIQDEFIDETQ 176
           G+  +   F +++          +R    L+      ++G     G + D + + +  + 
Sbjct: 133 GDLGIVRTFADVLEDDALDPTTKLRVLAELAQMEQRTVEGQALDLGWVRDGRWD-VSTSD 191

Query: 177 VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              + + KT           GAI    S  +   L  FG + G+ FQL DDLL+   D
Sbjct: 192 YLRMARHKTAFYSASSPLSIGAICGGGSSGQVGALGSFGMDAGLAFQLQDDLLNLVGD 249


>gi|195341723|ref|XP_002037455.1| GM12094 [Drosophila sechellia]
 gi|194131571|gb|EDW53614.1| GM12094 [Drosophila sechellia]
          Length = 461

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCY 85
               L +   Y   G GK +R  +    A   N +             ++    E +H  
Sbjct: 137 SQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMVHSA 196

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++     + SQ
Sbjct: 197 SLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQ 254

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++  L     +      Q+   + E             KT +L+  A ++ A++A A  N
Sbjct: 255 ILTDLVQGEFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDN 308

Query: 206 EKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             E    +G N+G+ FQL DD+LD     E + K
Sbjct: 309 VAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGK 342


>gi|148925911|ref|ZP_01809598.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844897|gb|EDK22001.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 297

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLQELGYEPILN--------MLSNVKSGKKLRSKLLLAIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 M------DARFTSIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|300362327|ref|ZP_07058503.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri
           JV-V03]
 gi|300353318|gb|EFJ69190.1| possible trans-hexaprenyltranstransferase [Lactobacillus gasseri
           JV-V03]
          Length = 338

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 18/190 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GK +R   V      F  +         ++  +IE +H  +LIHDD+  +D   +R G+
Sbjct: 54  PGKMLRPACVMLFG-AFGPDADQKQDELKKIATSIETLHNATLIHDDI--IDESSMRHGR 110

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P++  +Y +  A+ AG+ L   +  ++S     L   I             +Q +L G+ 
Sbjct: 111 PSIQTKYGKHIAVYAGDYLFALSLTLLSENAQSLHSVI--------ADGKTMQNILVGET 162

Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               + +   I E +     K KTG L   AC  GA  +     +  + + FGE LG  F
Sbjct: 163 EQYNNAYNINISEKEYLNQIKGKTGVLFGLACFIGAYESGIKVTKALKAKQFGEYLGQAF 222

Query: 222 QLADDLLDCE 231
           QL DD+LD  
Sbjct: 223 QLRDDILDYT 232


>gi|290892090|ref|ZP_06555086.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           J2-071]
 gi|290558213|gb|EFD91731.1| heptaprenyl diphosphate synthase [Listeria monocytogenes FSL
           J2-071]
          Length = 321

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 60  APNADFDAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 118 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 172 KTALLIAASCGLGGVVSGQSEADYQKLFRFGYYVGMAFQITDDVLDFVGTEKELGK 227


>gi|296387401|ref|ZP_06876900.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1]
          Length = 207

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 10/211 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           + +       R+D  LD L +     +Q     RL  A+RY+++ GGK++R  L      
Sbjct: 2   IAAYQARCQARVDAALDALFVAPREELQ-----RLYEAMRYSVMNGGKRVRPLLAYAACE 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A     A+E IH YSL+HDDLP+MD+  +RRG+PT H  +DE TAI+A +GL
Sbjct: 57  ALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSL-THNIGLQGMLGGQMLDIQDEF--IDETQVFMI 180
              AFE+++  +   +++     ML+      G  GM+GGQ +D+      +D+  + ++
Sbjct: 117 QALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVM 176

Query: 181 QKMKTGALMCFACESGAIMAH-ASQNEKERL 210
            + KTGAL+  +   GA+ +  A       L
Sbjct: 177 HRHKTGALIEASVRLGALASGRAEPAALAAL 207


>gi|119504024|ref|ZP_01626105.1| IdsA [marine gamma proteobacterium HTCC2080]
 gi|119460027|gb|EAW41121.1| IdsA [marine gamma proteobacterium HTCC2080]
          Length = 346

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 92/229 (40%), Gaps = 16/229 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHN-----DRLLSAIR-YALLGGKKIRSFLVTECASLFNVNH 69
           +  +LDD    T + ++         D L   +  Y + GG+  R  L    A +F  + 
Sbjct: 11  VAEVLDDYGKITRAELKNWLPKGDPEDYLYGPMSDYPMRGGRMFRPSLCIATAKVFGASL 70

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +    +IE +H   LIHDD+   D    RRGKPT+H +     A+ AG+ L   +  
Sbjct: 71  EQVIPAAVSIELLHNALLIHDDIE--DESDERRGKPTLHKKIGTPLALNAGDSLAFLSLR 128

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFID--ETQVFMIQKMK 184
            I      +  +   +++     +   Q    GQ LD    +D  I+  E     +   K
Sbjct: 129 PIIRGSASMGSDSIVRILEEF--DQMAQQTAEGQALDLGWRRDNHIELCEADYLKMVLKK 186

Query: 185 TGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T  L   F    GA++    +   + L  F   LG  FQ+ DD+L+   
Sbjct: 187 TCWLTTLFPIRLGALIGSGGRANLDSLFNFAFFLGAAFQIQDDVLNLIG 235


>gi|225020305|ref|ZP_03709497.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224947049|gb|EEG28258.1| hypothetical protein CORMATOL_00308 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 343

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 26/234 (11%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSA--------IRYALLGGKKIRSFLVTECASLFNVN 68
           D  L++ +L+   +++ +    L  +        +     GGK+ R       ++     
Sbjct: 24  DETLNEHVLRGMENVEDRLRVELEKSPDFLQEKVMHLTKAGGKRFRPMFTLLASNYGPRP 83

Query: 69  H-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 +    +E  H  +L HDD+  MD   +RRG P+ ++++    AI++G+ LL +A
Sbjct: 84  MCEDVFKAAVVVEMTHLATLYHDDV--MDEAQMRRGVPSANMRWSNSVAILSGDILLAHA 141

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKT 185
             I+S              +       G   ++ GQM + +     +       +   KT
Sbjct: 142 SRIMSELG--------VDTVAHFAETFGA--LVTGQMRETEGPGTGDPIEHYMKVINEKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+  A   GA+ + A       L+  G  +G++FQ+ DD++D     ED  K
Sbjct: 192 GVLIAAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIVDDIIDIFSTPEDSGK 245


>gi|11322972|emb|CAC16851.1| geranyl diphosphate synthase [Citrus sinensis]
          Length = 321

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 28/222 (12%)

Query: 31  MQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVNHLTALR------------- 74
           M      +L SA  Y   +G  GK+ R  ++   A+  NV     L              
Sbjct: 1   MVIAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDASATELRT 60

Query: 75  ----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL+ A   
Sbjct: 61  RQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVA 118

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++S K      + + ++  L     +      QM    D+             KT +L+ 
Sbjct: 119 LASLKNTEVVTLLATVVEHLVTGETM------QMTTSSDQRCSMDYYMQKTYYKTASLIS 172

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +C++ A++A  +         +G+NLG+ +QL DD+LD   
Sbjct: 173 NSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTG 214


>gi|189026971|emb|CAQ55981.1| polyprenyl synthetase [Aphanomyces euteiches]
          Length = 335

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 23/200 (11%)

Query: 49  GGKKIRSFLVTECASLF---------------NVNHLTALRVGAAIECIHCYSLIHDDLP 93
           GGKKIR  ++   +                       +  R+    E IH  SL+HDD+ 
Sbjct: 81  GGKKIRPTMILLLSRAAEAERAADQSTFPKSPEYIAASQQRLAEITEMIHTASLLHDDV- 139

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            +D    RRG  +V+  +    +I+AG+ LL  +   ++  ++     + +  ++S    
Sbjct: 140 -IDEADTRRGMQSVNKVFGSKMSILAGDFLLARSSICLARLRS-----LEAVELMSTAIE 193

Query: 154 IGLQGMLGGQMLDIQDEFIDE-TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             ++G +       ++  I            KTG+LM  +C++  I+   S+   E    
Sbjct: 194 HLVKGEVMQMRHADKNGAISPFEYYLRKNYYKTGSLMANSCKASLILGEHSERVCELGFA 253

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +G +LG+ FQL DD+LD + 
Sbjct: 254 YGRHLGLAFQLIDDVLDYKG 273


>gi|226356826|ref|YP_002786566.1| octaprenyl-diphosphate synthase [Deinococcus deserti VCD115]
          Length = 318

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 94/229 (41%), Gaps = 25/229 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---- 69
              +T L ++L      ++   +D + +       GGK+ R  +    A    V      
Sbjct: 6   AAFETRLREVLRSRVEFIELIGDDLVAA-------GGKRTRPMITLLAAQALGVGPGSSQ 58

Query: 70  -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               + +G  +E +H  SL+HDDL  +D+   RRG+     ++  V ++++G+ +L    
Sbjct: 59  WPEVIDLGVCVELLHSASLLHDDL--IDDADTRRGQQAAFRRFGNVVSVMSGDFMLARLL 116

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKT 185
            +++   +           L+         +  G++L  Q              I   KT
Sbjct: 117 TLLAGMPSGTA--------LTRAFGETASQICEGEVLQFQVAAYADYGLEHYLNIIHGKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            AL   A  + A++  +S+ ++E L  FG   G+ FQ+ DDLLD   + 
Sbjct: 169 AALTELAACAPAMLLGSSEAQREALATFGREYGLAFQMQDDLLDLAGEE 217


>gi|240103297|ref|YP_002959606.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3]
 gi|239910851|gb|ACS33742.1| Polyprenyl synthetase [Thermococcus gammatolerans EJ3]
          Length = 309

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 36  NDRLLSAIR-----------YALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           ++RL+ A+            Y +  GGK+IR  +    +    ++   AL + +AIE IH
Sbjct: 8   DERLVEALEGSVELAKKIGEYIIRSGGKRIRPRITLAVSKGLGLDENDALDLASAIELIH 67

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+HDD+  +D    RR  PTV +++    A+++G+ L   A  II+  K  + D + 
Sbjct: 68  TASLVHDDV--IDLAEKRRNNPTVVMRWGPELAVLSGDFLFVRALRIIAKKKAAMVDYV- 124

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           ++ +  +     LQ  + G         +D    + I   KTG L   A    A      
Sbjct: 125 AKAVEDMVKGEILQEAVRG------SVHLDLDTYYEIIDRKTGKLFGAAFALPAYY--LE 176

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE 231
           +     L   G  +G  FQ+ DD+LD  
Sbjct: 177 KPYWMELDKAGTLVGRAFQIVDDVLDYF 204


>gi|254796624|ref|YP_003081460.1| polyprenyl synthetase family protein [Neorickettsia risticii str.
           Illinois]
 gi|254589861|gb|ACT69223.1| polyprenyl synthetase family protein [Neorickettsia risticii str.
           Illinois]
          Length = 302

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 20/235 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +   E  + ++ +L D +         +   ++LS+       GK+IR+ L     +L
Sbjct: 9   LNASFSEKLRSVEEVLYDSMATFTKLRSIEDAKKMLSS-------GKRIRALLSLLSFAL 61

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +    +R  A IE IH  +L+HDD+  +D   IRRGKP +   +    +++ G+ L
Sbjct: 62  CENSDTDVEIRAAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNRISVLTGDFL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L+ AFEII   +      + S+    L+    LQ       L    E + E++   +   
Sbjct: 120 LSVAFEIILECENLSVVLLLSKTAKQLSEGEMLQ-------LQSIGEIVSESEYLEVIAR 172

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC--EEDLPK 236
           KT  L   A E  AI+    +     LR  G  +G+ FQ+ DD+LD    +++ K
Sbjct: 173 KTAVLFSAAAEIAAILTG-KKEYVVILREIGFLIGMAFQIIDDVLDYGESQEVGK 226


>gi|184200190|ref|YP_001854397.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila
           DC2201]
 gi|183580420|dbj|BAG28891.1| putative polyprenyl diphosphate synthase [Kocuria rhizophila
           DC2201]
          Length = 339

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 20/223 (8%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNH 69
           + +R++  L +           + +D+L     + LL  GGK++R  L    A +    +
Sbjct: 23  SLERVEQRLGE---------SVRSSDQLADVTAHHLLAAGGKRVRPLLALLAAEVAGSVN 73

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +     +E  H  SL HDD+  MD+  +RRG  T H  +    AI+ G+ +   A  
Sbjct: 74  EDVIEAAVVVELTHLASLYHDDV--MDSAPMRRGVETAHTVWGNTVAILTGDMIFARASA 131

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++S+   +      S ++ + T    + G L       + +         +   KTG+L+
Sbjct: 132 MVSALGQE------SLMIQASTFERLVIGQLRETTGPAEGQD-PLEHYLEVIAGKTGSLI 184

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + + GA++  A ++  + +  +GE +G+ FQLADD++D   
Sbjct: 185 AASGQYGALLGGAPRSVVDLMVVYGEKVGLAFQLADDIIDLTG 227


>gi|163791759|ref|ZP_02186144.1| heptaprenyl diphosphate synthase, component II, putative
           [Carnobacterium sp. AT7]
 gi|159872973|gb|EDP67092.1| heptaprenyl diphosphate synthase, component II, putative
           [Carnobacterium sp. AT7]
          Length = 326

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           + E    + + L   +    S +  ++     + +     GGK +R       ++   + 
Sbjct: 6   MWEAYPELQSELMQTIELMDSRIHLRNKSIEHALMDMMHTGGKLVRPAFTLLFSTFGEDH 65

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A    AAIE +H  +LIHDD+  +D+   RRG+ T+  +Y +  A+ AG+ L T +
Sbjct: 66  DPRRARAFAAAIEILHMATLIHDDV--IDDSPKRRGQSTIQSKYGKDVAVYAGDYLFTVS 123

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F++++       ++++   + +      L G +  QM    ++ I           KT  
Sbjct: 124 FKLLTDY----SNSMKQMQINTNGMERILMGEI-DQMHLRYNQKITVRNYLTQISGKTAQ 178

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   AC SGA+    S+         G ++G+ FQ+ DD+LD  +
Sbjct: 179 LFALACYSGALEGGQSERFARNCYYIGSHIGMAFQIMDDILDYSQ 223


>gi|296268287|ref|YP_003650919.1| trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833]
 gi|296091074|gb|ADG87026.1| Trans-hexaprenyltranstransferase [Thermobispora bispora DSM 43833]
          Length = 331

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 23/230 (10%)

Query: 15  RIDTILDDLLLQTASHMQ-------TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           R+D  L + L    + ++          +  +  A R+ +  GGK+ R+ LV   A   +
Sbjct: 11  RVDERLAEDLATGLAEVERMLRASVESEDAFITEAARHVMEAGGKRFRAMLVLLAAQFGD 70

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 +     IE  H  +L HDD+  MD   +RRG P+ + ++ +  AI+ G+ L   
Sbjct: 71  PKAPAVVPGAVVIELTHLATLYHDDV--MDQAPMRRGLPSANARFGDTVAILTGDYLFAQ 128

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE-TQVFMIQKM 183
           A EI++    +                     ++ GQ+ +     E +D  T    +   
Sbjct: 129 ASEILADLGAE----------AIRVQARTFSRLVRGQIRETIGPPEGMDPITHYLQVLAD 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTG+L+  +   GA+++ A +  ++RL    E +G+ +QL DD++D   D
Sbjct: 179 KTGSLIATSGRFGAMLSGAPREVEDRLAGACEAIGVAWQLGDDIIDVVSD 228


>gi|225436206|ref|XP_002268229.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 321

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)

Query: 31  MQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVN-HLTALR------------ 74
           M      +L SA  Y   +G  GK+ R  ++   A+  NV     AL             
Sbjct: 1   MVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVPLPRPALAEVPETLSTELRT 60

Query: 75  ----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +    E IH  SL+HDD+  +D+   RRG  +++I      A++AG+ LL+ A   
Sbjct: 61  RQQCIAEITEMIHVASLLHDDV--LDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVA 118

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++S K     ++ + ++  L     +      QM    ++ +           KT +L+ 
Sbjct: 119 LASLKNTEVVSLLATVVEHLVTGETM------QMTSTSEQRVSMEYYLQKTYYKTASLIS 172

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +C++ A++A  +         +G+NLG+ FQL DD+LD   
Sbjct: 173 NSCKAIALLAGQTAEVSMLAFEYGKNLGLAFQLIDDVLDFTG 214


>gi|258509177|ref|YP_003171928.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG]
 gi|257149104|emb|CAR88077.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus GG]
          Length = 322

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 18/225 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +R++ +      Q  + +Q Q N            GGK +RS L+   A     
Sbjct: 15  QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV  +     AI AG+ L    
Sbjct: 64  DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+++S    +  D   +  ++         G +  Q                    KT A
Sbjct: 122 FQLLSEQDPETVDLRTNARIMKR----IFMGEV-DQNGPSAPLIPTVNAYLSAISGKTAA 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A  +GA + H S  +K+    FG  LG+ FQ+ DDLLD  +
Sbjct: 177 LFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 221


>gi|170016839|ref|YP_001727758.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
 gi|169803696|gb|ACA82314.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
          Length = 304

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 20/210 (9%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLI 88
           +    +      + YA+L GGK++R  L     S FNV+     L++  A+E +H YSL+
Sbjct: 24  IAISDDAEFAQMMCYAVLNGGKRLRPLLTLAVLSSFNVSVTPNLLKLATAVEWVHSYSLV 83

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT------QLKDNI 142
           HDDLP+MDN   RRG+P+VH ++ E +AI+ G+ LLT AF+++S          ++ D  
Sbjct: 84  HDDLPAMDNDLWRRGQPSVHAKFGESSAILVGDALLTGAFQVVSEANALAANVQKVSDEQ 143

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------IQKMKTGALMCFACESG 196
              ++  L+   G  GM+ GQ+ D+Q+    ++ V        +   KT AL+ +A + G
Sbjct: 144 VITIIRQLSRYAGANGMVIGQIHDMQNHGHQKSDVTYDWLLNDVYAPKTAALISYATDIG 203

Query: 197 AIMAH--AS----QNEKERLRCFGENLGII 220
             ++   AS       +  L  FG + G+ 
Sbjct: 204 GKLSQEMASTLVHPKTQYDLYQFGYDFGLA 233


>gi|326772137|ref|ZP_08231422.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Actinomyces viscosus C505]
 gi|326638270|gb|EGE39171.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Actinomyces viscosus C505]
          Length = 369

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 19/242 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G LP    E   RI   L  +  +    + +            A  GGK++R  L   
Sbjct: 1   MIGSLPLSAPELESRIIPALQTIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALL 60

Query: 61  CASLFN----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            A L +             G A+E  H  +L HDD+  MD   +RRG P+    +    A
Sbjct: 61  TAQLGDPALAATGEEIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWGNSAA 118

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FID 173
           I+ G+ L+  A +++++   +            + H    + +  GQ+ +          
Sbjct: 119 ILTGDVLVARASQLVAALGPEAV----------MAHAKTFERLCMGQLHETLPRPAGTDP 168

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                 +   KTG+L+  +   GA++  A    ++ +  FGE +G+ FQLADD++D   D
Sbjct: 169 VDHYIQVLADKTGSLIAVSARYGAMLTGAGTRTEQIVEEFGERIGVAFQLADDVIDLMSD 228

Query: 234 LP 235
             
Sbjct: 229 SA 230


>gi|227892929|ref|ZP_04010734.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM
           16047]
 gi|227865267|gb|EEJ72688.1| trans-hexaprenyltranstransferase [Lactobacillus ultunensis DSM
           16047]
          Length = 326

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 7/226 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           SK  EN   I   L+++       ++T H     + ++ A  GGK +R  L+   A    
Sbjct: 4   SKPWENYPLIANELEEVNDFIQKTIKTPHKSLQAALLQMADNGGKYLRPSLLLLAAHAVG 63

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             +   +++ ++IE +H  +LIH     +D+   RRG  ++   + +  A+  G+ L T 
Sbjct: 64  KTNERTIKLASSIEILHMATLIH--DDIIDDSDERRGNVSIQAAFGKDVAVYTGDLLFTD 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
            F+++     + +  +R+    + T    L G L GQM +  +            K KT 
Sbjct: 122 FFDLMLDAIDEHEYLVRN----AQTMRKILNGEL-GQMAERFNLKQTLDDYLRDVKGKTA 176

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A E GA  A A+  + + L  FGENLGI FQ+ DD+LD   
Sbjct: 177 ALFRLAAEEGAHFAGANSMQSDALAQFGENLGIAFQMVDDILDYSG 222


>gi|313681996|ref|YP_004059734.1| polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154856|gb|ADR33534.1| Polyprenyl synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 299

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 20/218 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
             +++L+ +    +   H   L       L GGK++R+ L+   A     +   A  +GA
Sbjct: 6   ETVENLIAKLIDEVDYPHAAELFK----KLSGGKRLRARLILTIA----PHEPKAPLLGA 57

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +E IH  SL+HDD+  +D   +RRG P+V+      TAI+ G+ L + AF  ++S    
Sbjct: 58  IVELIHAASLLHDDV--IDEAQLRRGVPSVNATEGSKTAIMLGDILYSKAFSELTSFDPS 115

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
           +     ++ +      + +  M+   M +  +   D      +  +KT  L+     S A
Sbjct: 116 I-----ARAVAESVTRLSVGEMMDVSMAERFNTDRDL--YLKMLYLKTATLIEACAYSAA 168

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++A     + E    +G+NLG+ FQ+ DD+LD   D  
Sbjct: 169 VLAG---KDAEAHATYGKNLGLAFQIVDDILDITADEA 203


>gi|167752314|ref|ZP_02424441.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216]
 gi|167660555|gb|EDS04685.1| hypothetical protein ALIPUT_00558 [Alistipes putredinis DSM 17216]
          Length = 329

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 15/229 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           L    K ++  L +   Q      T     L   + YAL   GK IR   V   A+L   
Sbjct: 4   LDMIRKPVEGDL-EAFEQFIRQKFTADGTLLSEMLDYALSARGKGIRPMTVLLSAALNAP 62

Query: 68  NHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    AL     +E IH  SLIHDD+  +D   +RRG+ +V+ ++    A++ G+ 
Sbjct: 63  AGQRSGGLRALLAATLVEMIHVASLIHDDV--IDESDMRRGRASVNARWQSRNAVVVGDY 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           +L    ++                + +L     L      Q      + +       I  
Sbjct: 121 ILAKNMDLGLKSGQFDLVTHVCGAIATLCEGEIL------QNDKANRQEMTRASYLDIIY 174

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            KT  L+  +  +GA+   AS+ ++  +R FGE++G+ FQ+ DD+LD  
Sbjct: 175 KKTACLIGVSASAGALAVGASREKQALMRKFGESIGMAFQIQDDILDYT 223


>gi|86140643|ref|ZP_01059202.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832585|gb|EAQ51034.1| polyprenyl synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 325

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 12/211 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNH--LTALRVGAAI 79
           L +    +  +    LL+ I + +    GK++R   V   A +           R  + I
Sbjct: 17  LFEQKFSLSMKSKVPLLNRITHYIVNRKGKQMRPMFVFLVAKMLGDERLNDRTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  +L+HDD+  +D+ Y RRG  +++  +    A++ G+ LL+    ++ S   +  
Sbjct: 77  ELIHTATLVHDDV--VDDSYRRRGFFSLNALWKNKIAVLVGDFLLSKG--LLLSIDNEDF 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D +    ++S+      +G L  Q+   +D  I E   F I + KT  L+   C  GA  
Sbjct: 133 DLL---QIISVAVREMSEGELL-QIEKARDLDITEEVYFEIIRQKTATLIAACCAMGACA 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            HAS+ + E +R FGE +G+ FQ+ DDL D 
Sbjct: 189 IHASKKDVEAMRKFGELIGLAFQIKDDLFDY 219


>gi|294784835|ref|ZP_06750123.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_27]
 gi|294486549|gb|EFG33911.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_27]
          Length = 326

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 19/235 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-- 66
           L+E  +R+   +   L+   S  ++Q    L   +  +   GK +RS L+  CA L +  
Sbjct: 6   LKEWIERVKYYI--HLIADYSIKESQVGAVLDDVLNLS---GKMLRSKLLLLCAFLGSNW 60

Query: 67  -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +     ++ A +E  H  SLIHDD+  +D+   RRGK ++  +Y +  A+ AG+ L+ 
Sbjct: 61  KDHKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGKVSIQGKYGKDAAVFAGDFLIA 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F   +        +I S+ +  +      Q +   Q      E I E + F   + KT
Sbjct: 119 RIFYYGAMENLNEAVSILSKTVEYMCIGEIEQDLCRYQ------EDISEKKYFENIERKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
            AL   A   GA  A  S+   ++L+ F +NLG++FQL DD+LD      +L K+
Sbjct: 173 AALFQAASYIGAKEAGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKE 227


>gi|328949208|ref|YP_004366545.1| polyprenyl synthetase [Treponema succinifaciens DSM 2489]
 gi|328449532|gb|AEB15248.1| Polyprenyl synthetase [Treponema succinifaciens DSM 2489]
          Length = 362

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 36/261 (13%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASH-----------MQTQHNDRLLSAIRYAL-L 48
           MN    + L    ++I++ + + L   A+            + ++H   L+   R  + L
Sbjct: 1   MNKHFLAHL----EQIESSIKNFLPLEANSEWKKFSFGNENIDSKHIFPLIETTRSLVDL 56

Query: 49  GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK+ R  L+  CA     +       A  +   +E +H  SLIHDD+   D+  +RRGK
Sbjct: 57  GGKRWRPLLLVLCARACAKDKEKSQEAAYLLAPLVEFVHTASLIHDDIE--DSSPVRRGK 114

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           P  +I Y   TAI AG+ L   A   I       +LK+ + S  ++       L+ +  G
Sbjct: 115 PAAYITYGIDTAINAGSWLYFEAPLCIEKLNCSIELKNRLYSNYLME------LRRLHLG 168

Query: 163 QMLDIQDEFI-----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           Q +DI             +   + K KTG L   A ++G + ++A +   ++       +
Sbjct: 169 QAMDIAWHRDNTKVPSVQEYLKMVKGKTGTLASLAAKTGTLASNADEETVKKAGIIASEI 228

Query: 218 GIIFQLADDLLDC-EEDLPKK 237
           G  FQ+ DD+++    +  KK
Sbjct: 229 GAGFQIIDDVINLTTGNPGKK 249


>gi|152990770|ref|YP_001356492.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2]
 gi|151422631|dbj|BAF70135.1| polyprenyl synthetase [Nitratiruptor sp. SB155-2]
          Length = 296

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 18/217 (8%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +LD + ++    ++   + R+L   R ++  GK +RS L+   A         A+   A 
Sbjct: 1   MLDQVKMRMEQIVEDLQDKRVLEIYR-SIPMGKMLRSKLILNIA-----PVPEAIHTSAI 54

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH  SL+HDD+  +D+   RRG P+V+       AI+ G+ L   AF  +SS    L
Sbjct: 55  IELIHMASLLHDDV--IDDADTRRGNPSVNAVLGNKPAIMIGDILYAKAFYELSSLPKTL 112

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              I      S    +   G L    L    +  D      +   KT +L+  +  S A 
Sbjct: 113 AQTI------SQAVALLSLGELKDVELSKSFQ-PDIEAYMDMIYKKTASLIEASAISAAY 165

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++     + +    +G+ LG+ FQ+ DD+LD   D  
Sbjct: 166 LSG---KDLKSYGEYGKKLGLAFQIVDDILDIISDEE 199


>gi|17481244|dbj|BAB79205.1| farnesyl diphosphate synthase [Rhodopseudomonas palustris]
          Length = 147

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/147 (44%), Positives = 94/147 (63%), Gaps = 4/147 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P+MDN  +RRG+PT+H  YD+ TAI+AG+ LLT+AF+I++  +      +R  L  
Sbjct: 1   HDDMPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHNDPTVRLLLTR 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            L    GL GM+GGQMLD+  E      +   V  +Q+MKTGAL+ + C +GAI+  AS 
Sbjct: 61  VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASP 120

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
           ++   L  +G  LG  FQ+ADD+LD E
Sbjct: 121 DQYRALDDYGRALGEAFQIADDILDVE 147


>gi|300117458|ref|ZP_07055248.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1]
 gi|298725293|gb|EFI65945.1| heptaprenyl diphosphate synthase component II [Bacillus cereus SJ1]
          Length = 269

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 8/179 (4%)

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           +       +        V  A+E IH  SL+HDD+  +D  ++RRG  TV+ ++ +  A+
Sbjct: 1   MLLAGKFGDYKLDAIKHVAVALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAM 58

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
             G+ L   + E I++ +        S  +L +            Q+ D  +   +    
Sbjct: 59  YTGDYLFAKSLECITNIEIPEAHQALSHTILEVCKGEI------EQIKDKYNYDQNLRTY 112

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               K KT  L+  +C+ GAI A A+++   RL  +G  +G+ +Q+ DD+LD      K
Sbjct: 113 LRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEK 171


>gi|305679797|ref|ZP_07402607.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
 gi|305660417|gb|EFM49914.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
          Length = 343

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 26/234 (11%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSA--------IRYALLGGKKIRSFLVTECASLFNVN 68
           D  L++ +L+   +++ +    L  +        +     GGK+ R       ++     
Sbjct: 24  DDTLNEHVLRGMENVEDRLRVELEKSPDFLQEKVMHLTKAGGKRFRPMFTLLASNYGPRP 83

Query: 69  H-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                 +    +E  H  +L HDD+  MD   +RRG P+ ++++    AI++G+ LL +A
Sbjct: 84  MCEDVFKAAVVVEMTHLATLYHDDV--MDEAQMRRGVPSANMRWSNSVAILSGDILLAHA 141

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKT 185
             I+S              +       G   ++ GQM + +     +       +   KT
Sbjct: 142 SRIMSELG--------VDTVAHFAETFGA--LVTGQMRETEGPGTGDPIEHYMKVINEKT 191

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           G L+  A   GA+ + A       L+  G  +G++FQ+ DD++D     ED  K
Sbjct: 192 GVLIAAAGYLGALHSGADMETAVCLQAVGTAVGMVFQIVDDIIDIFSTPEDSGK 245


>gi|110589268|gb|ABG77143.1| trans-hexaprenyltranstransferase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 168

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 8/163 (4%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  LV   A   +      + + A IE IH  +L+HDD+  +D   +RR + T +
Sbjct: 14  GGKRLRPMLVLLAARACDYQGKRHINLAAIIEFIHTATLLHDDV--VDGSELRRNQETAN 71

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + +FE++ +      + +R   +LS   N   +G +  Q+L++ 
Sbjct: 72  AVWGNEASVLVGDFLYSRSFEMMVA-----VEQMRVMDILSHATNRIAEGEVL-QLLNVH 125

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           +    E     + K KT  L       G +++     +++ L 
Sbjct: 126 NPETSEADYMEVIKRKTATLFEAGTRLGGVISGVDPQQEQALA 168


>gi|302541341|ref|ZP_07293683.1| polyprenyl synthetase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458959|gb|EFL22052.1| polyprenyl synthetase [Streptomyces himastatinicus ATCC 53653]
          Length = 365

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +    +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 72  GGKAVRPALALLSAQAAGADPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T   +  R+   L+      + G       + +
Sbjct: 130 KVHGPAQAILVGDALFALAGEILLELGT--AEAGRATRRLTSATRKLIDGQAQDISYEHR 187

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DD+L
Sbjct: 188 -ERVTVEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDVL 246

Query: 229 DCEED 233
               D
Sbjct: 247 GIWGD 251


>gi|28377915|ref|NP_784807.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum WCFS1]
 gi|254556099|ref|YP_003062516.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum JDM1]
 gi|308180094|ref|YP_003924222.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270749|emb|CAD63654.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum WCFS1]
 gi|254045026|gb|ACT61819.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum JDM1]
 gi|308045585|gb|ADN98128.1| trans-hexaprenyltranstransferase, component II [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 325

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 88/219 (40%), Gaps = 11/219 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-G 76
             L   L           NDR+   +     GGK +R       +     ++   LR   
Sbjct: 17  AALKPYLATNVKIDNAAINDRVHDLLA---AGGKFLRPGFFYLFSQFGPDHNTARLRAGA 73

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA+E +H  +LIHDD+  +D    RR   T+H  Y +  AI AG+ L T  F+ +     
Sbjct: 74  AAMELLHVATLIHDDV--IDESPERRHVTTIHQDYGQRNAIYAGDLLFTCYFDQVLIAAK 131

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
              D      + +      LQG L  QM    D          I + KT  L   +CE G
Sbjct: 132 TADD----VKINTAAMRAILQGEL-DQMAHNFDPTTTVDDYLAIARGKTARLFSLSCEQG 186

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A  A A  +  +  +  GE +G+ +Q+ DD+LD   D  
Sbjct: 187 AHFAGADASVVKLAQQIGERMGLAYQMLDDVLDYAGDEA 225


>gi|325967740|ref|YP_004243932.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323706943|gb|ADY00430.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 343

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 20/231 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++  Q   ++  + ++     + Y +  GGK++R  +          ++  AL   A +E
Sbjct: 14  EIDEQLIKYLNREVSEDFKDTVIYQVSTGGKRLRPLITLTATRACGSDYKVALPAAAIVE 73

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK- 139
            IH YSLI+DD+  +D   +RR K TV  +Y +  AI+ G        E I   +  +  
Sbjct: 74  LIHNYSLIYDDI--IDEALLRRNKLTVRAKYGDNAAILIGIWYREAIEEAILETRDPVSF 131

Query: 140 DNIRSQLMLSLTHNIGLQGMLG--------------GQMLDIQDEFIDETQVFMIQKMKT 185
               ++ + ++     L  +L               G  L    E +       +  +KT
Sbjct: 132 ARETARTIRAIDEGERLDILLEYSGRKDPYFVENRLGPRLLSNWESL-YNTYIKMISLKT 190

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            AL+  +   GA+ A+ + +  + L  +G  LG+ FQ+ DD+LD   D+ K
Sbjct: 191 AALIRASSVFGAMSAN-TPHCVKALSDYGTYLGLAFQVLDDILDIFGDVKK 240


>gi|79324330|ref|NP_001031483.1| geranyl diphosphate synthase, putative / GPPS, putative /
           dimethylallyltransferase, putative / prenyl transferase,
           putative [Arabidopsis thaliana]
 gi|57222236|gb|AAW39025.1| At2g34630 [Arabidopsis thaliana]
 gi|330253907|gb|AEC09001.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 422

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 38/260 (14%)

Query: 3   GGLPSKL-QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL---LG 49
           GG   +L  ++S  ++  LD          LL      M      +L SA  Y     + 
Sbjct: 64  GGFSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQ 123

Query: 50  GKKIRSFLVTECASLFNVNHLTALR-----------------VGAAIECIHCYSLIHDDL 92
           GK+ RS ++   A+  NV    AL                  +    E IH  SL+HDD+
Sbjct: 124 GKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV 183

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D+   RRG  ++++      +++AG+ LL+ A   +++ K      + +  +  L  
Sbjct: 184 --LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVT 241

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              +      ++    ++             KT +L+  +C++ A++   +         
Sbjct: 242 GETM------EITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFE 295

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +G NLG+ FQL DD+LD   
Sbjct: 296 YGRNLGLAFQLIDDILDFTG 315


>gi|57238259|ref|YP_178660.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221]
 gi|57167063|gb|AAW35842.1| polyprenyl synthetase family protein [Campylobacter jejuni RM1221]
 gi|284925804|gb|ADC28156.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315057959|gb|ADT72288.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 297

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLQELGYEPILN--------MLSNVKSGKKLRSKLLLTIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 M------DARFASIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|329944216|ref|ZP_08292475.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328530946|gb|EGF57802.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 368

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 24/244 (9%)

Query: 1   MNGGLPSKLQENSKRID---TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           M G LP    +   RI      ++D L++  +      N         A  GGK++R  L
Sbjct: 1   MIGSLPLSAPQLEARIVPALQAIEDRLMEVVTSADETINPP---TSHLAEAGGKRLRPVL 57

Query: 58  VTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
               A L +            G A+E  H  +L HDD+  MD   +RRG P+    +   
Sbjct: 58  ALLTAQLGDPALAAGEQIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWGNS 115

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---F 171
            AI+ G+ L+  A +++++   +            + H    + +  GQ+ +        
Sbjct: 116 AAILTGDVLVARASQLVAALGPEAV----------MAHAKTFERLCMGQLHETLPRPSGT 165

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                   +   KTG+L+  +   GA++  A    +  +  FGE +G+ FQLADD++D  
Sbjct: 166 DPVDHYIQVLADKTGSLIAVSARYGAMLTGAGVRTERIVEEFGEKIGVAFQLADDVIDLM 225

Query: 232 EDLP 235
            D  
Sbjct: 226 SDSA 229


>gi|227485061|ref|ZP_03915377.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236894|gb|EEI86909.1| possible geranyltranstransferase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 276

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 7/219 (3%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAA 78
           LD  ++           ++L  A+ YA  GGK+IR+FL  E   +F+ N      ++  +
Sbjct: 13  LDKKIIDREIQSYFNPKNKLEEAMVYATDGGKRIRAFLYLETKKMFSQNISELDYKLAMS 72

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE IH YSL+HDDLP+MD+   RRG+ +VH ++ E   I+ G+ LL  A  I+     + 
Sbjct: 73  IEFIHAYSLVHDDLPAMDDDDYRRGQESVHKKFGEDIGILTGDALLNEAALILFDIGIKD 132

Query: 139 KDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKMKTGALMCFACESG 196
              +++   +L         GM+ GQ++D++ E   D + +  + K KT  L   AC + 
Sbjct: 133 SSYLKASSYILERASR---FGMIEGQVMDLRRESTYDLSYLLEVYKKKTSDLFKAACLAA 189

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL-DCEEDL 234
           A+ ++ ++    ++  F ENLG+ FQ+ DDLL D  +D 
Sbjct: 190 ALTSNQTEYTYRKIEVFAENLGLAFQIQDDLLEDTYKDE 228


>gi|153951500|ref|YP_001398431.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938946|gb|ABS43687.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 297

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDELIKQFLQELGYEPILN--------MLSNVKSGKKLRSKLLLAIAD----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A IE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICAVIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYELSK 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 108 M------DARFASIISDAVVKLAIGELMDVDL-GEKFNINKEAYLKMIYNKTAVLIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILAGLYEQD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|25011822|ref|NP_736217.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           NEM316]
 gi|77413688|ref|ZP_00789872.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515]
 gi|24413363|emb|CAD47442.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160288|gb|EAO71415.1| polyprenyl synthetase family protein [Streptococcus agalactiae 515]
          Length = 326

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 12/234 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S    N   +   +D+        +Q ++ D   +  +    GGK++R       + L N
Sbjct: 2   SSYWNNYPELKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGN 61

Query: 67  V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +     ++ A++E +H  +LIHDD+  +D+  +RRG  T+  ++ +  A+  G+ L
Sbjct: 62  KENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNMTIQSKFGKDIAVYTGDLL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T  F++I               + + +    L G L  QM    ++             
Sbjct: 120 FTVFFDLILESMADTP----FMRINAKSMRKILMGEL-DQMHLRYNQQQGIHHYLRAISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           KT  L   A + GA    A +         G N+G+ FQ+ DD+LD   D  KK
Sbjct: 175 KTAELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTAD--KK 226


>gi|16082302|ref|NP_394768.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma
           acidophilum DSM 1728]
 gi|10640656|emb|CAC12434.1| geranylgeranyl pyrophosphate synthase related protein [Thermoplasma
           acidophilum]
          Length = 354

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 20/237 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTAL 73
           RID  +     +  +  +   + R++  IR Y   GGK++R   +     LF   +    
Sbjct: 18  RIDERISRFFDRKEAETKDDLSRRVIRMIREYTEGGGKRLRPIFLVLGYRLFADENNAIF 77

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH--------------IQYDEVTAIIA 119
               +IE    Y LIHDD+  +D+  +RRGKP++H               +  E  AI+A
Sbjct: 78  DASISIELAQSYLLIHDDV--IDDSDLRRGKPSMHIRLWRSFFPESEKGKKMGEGLAIVA 135

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+   TYA E + +        + + + L+ T  +   G     +    ++F  E  +  
Sbjct: 136 GDLAETYAHESLINSDFDPSLLLLADMELTKTIEMTGYGQFLDVVSGTLNDFR-ENDLIR 194

Query: 180 IQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   KT    +      GA+++    ++   LR FG  LGI FQL DD+L    D  
Sbjct: 195 LHLWKTARYTLEGPLAMGALLSG-RHDQIMDLRLFGRTLGIAFQLKDDILGLFGDEA 250


>gi|126434936|ref|YP_001070627.1| polyprenyl synthetase [Mycobacterium sp. JLS]
 gi|126234736|gb|ABN98136.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
          Length = 386

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 10/195 (5%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  L               L   A +E  H   LIHDD+   D  + RRGK
Sbjct: 50  YPRRGGKALRPALSIAVCLGLGGQLDAILPTAATLELYHNAFLIHDDIE--DESWWRRGK 107

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PT+HI +    A+  G+ +L+ + + +     ++      +++ ++ H    +  + GQ 
Sbjct: 108 PTMHIDHGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAH--MTRRTVEGQA 165

Query: 165 LDIQD-----EFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           ++++        +D+     + ++KT         ++GAI A    N  E L   G +LG
Sbjct: 166 IELEWVRSNAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPNRLEPLESLGRHLG 225

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DDLL+   D
Sbjct: 226 AAFQITDDLLNLRAD 240


>gi|20260214|gb|AAM13005.1| putative trans-prenyltransferase [Arabidopsis thaliana]
          Length = 423

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 38/260 (14%)

Query: 3   GGLPSKL-QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL---LG 49
           GG   +L  ++S  ++  LD          LL      M      +L SA  Y     + 
Sbjct: 65  GGFSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQ 124

Query: 50  GKKIRSFLVTECASLFNVNHLTALR-----------------VGAAIECIHCYSLIHDDL 92
           GK+ RS ++   A+  NV    AL                  +    E IH  SL+HDD+
Sbjct: 125 GKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV 184

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D+   RRG  ++++      +++AG+ LL+ A   +++ K      + +  +  L  
Sbjct: 185 --LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVT 242

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              +      ++    ++             KT +L+  +C++ A++   +         
Sbjct: 243 GETM------EITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFE 296

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +G NLG+ FQL DD+LD   
Sbjct: 297 YGRNLGLAFQLIDDILDFTG 316


>gi|34762284|ref|ZP_00143289.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase;
           Farnesyltransferase; Heptaprenyl diphosphate synthase
           component II [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|256846036|ref|ZP_05551494.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2]
 gi|27888070|gb|EAA25132.1| Farnesyl pyrophosphate synthetase; Geranyltranstransferase;
           Farnesyltransferase; Heptaprenyl diphosphate synthase
           component II [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|256719595|gb|EEU33150.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 326

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 19/235 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-- 66
           L+E  +R+   +   L+   S  ++Q    L   +  +   GK +RS L+  CA L +  
Sbjct: 6   LKEWIERVKYYI--HLIADYSIKESQVGAVLDDVLNLS---GKMLRSKLLLLCAFLGSNW 60

Query: 67  -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             N     ++ A +E  H  SLIHDD+  +D+   RRGK ++  +Y +  A+ AG+ L+ 
Sbjct: 61  KDNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGKVSIQGKYGKDAAVFAGDFLIA 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F   +        +I S+ +  +      Q +   Q      E I E + F   + KT
Sbjct: 119 RIFYYGAMENLNETVSILSKTVEYMCIGEIEQDLCRYQ------EDISEKKYFENIERKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
            AL   A   GA     S+   ++L+ F +NLG++FQL DD+LD      +L K+
Sbjct: 173 AALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKE 227


>gi|258540369|ref|YP_003174868.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705]
 gi|257152045|emb|CAR91017.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus Lc 705]
          Length = 322

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 18/225 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +R++ +      Q  + +Q Q N            GGK +RS L+   A     
Sbjct: 15  QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV  +     AI AG+ L    
Sbjct: 64  DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+++S    +  D   +  ++         G +  Q                    KT A
Sbjct: 122 FQLLSEQDPETVDLRTNARIMKR----IFMGEV-DQNGPSAPLIPTVNAYLSAISGKTAA 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A  +GA + H S  +K+    FG  LG+ FQ+ DDLLD  +
Sbjct: 177 LFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMIDDLLDYTQ 221


>gi|108799279|ref|YP_639476.1| polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119868395|ref|YP_938347.1| polyprenyl synthetase [Mycobacterium sp. KMS]
 gi|108769698|gb|ABG08420.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119694484|gb|ABL91557.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
          Length = 386

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 10/195 (5%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y   GGK +R  L               L   A +E  H   LIHDD+   D  + RRGK
Sbjct: 50  YPRRGGKALRPALSIAVCLGLGGQLDAILPTAATLELYHNAFLIHDDIE--DESWWRRGK 107

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           PT+HI +    A+  G+ +L+ + + +     ++      +++ ++ H    +  + GQ 
Sbjct: 108 PTMHIDHGIPIAVNVGDAMLSLSLQPLLDNVERIGLGPALRILRAVAH--MTRRTVEGQA 165

Query: 165 LDIQD-----EFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           ++++        +D+     + ++KT         ++GAI A    +  E L   G +LG
Sbjct: 166 IELEWVRSNAWRLDDADYLTMVELKTSWYSFITPLQAGAIAAGVDPDRLEPLESLGRHLG 225

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DDLL+   D
Sbjct: 226 AAFQITDDLLNLRAD 240


>gi|254385932|ref|ZP_05001250.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
 gi|194344795|gb|EDX25761.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
          Length = 364

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 73  GGKAVRPALALLSAEAAGAAAEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 130

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 131 KVHGPAQAILVGDALFALANEVLLELGTVEAG--RAARRLTTATRKLIDGQAQDISYEHR 188

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     ++L  +G +LG+ FQ  DDLL
Sbjct: 189 -ERVSVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLL 247

Query: 229 DCEED 233
               D
Sbjct: 248 GIWGD 252


>gi|15610519|ref|NP_217900.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis H37Rv]
 gi|148663246|ref|YP_001284769.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
           H37Ra]
 gi|167966941|ref|ZP_02549218.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
           H37Ra]
 gi|2661662|emb|CAA15768.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE)
           (POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|148507398|gb|ABQ75207.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
           H37Ra]
          Length = 350

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 14/225 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++ 
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTG 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 151 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 205

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             C  GA++A+A       L  FG  LG+ FQ  DDL+    D  
Sbjct: 206 CCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 250


>gi|294816066|ref|ZP_06774709.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294328665|gb|EFG10308.1| Polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 369

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 78  GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 135

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T      R+   L+      + G       + +
Sbjct: 136 KVHGPAQAILVGDALFALANEILLELDTVEAG--RATRRLTTATLRLIDGQAQDISYEHR 193

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 194 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVDDLL 252

Query: 229 DCEED 233
               D
Sbjct: 253 GIWGD 257


>gi|118462300|ref|YP_883928.1| polyprenyl synthetase [Mycobacterium avium 104]
 gi|118163587|gb|ABK64484.1| polyprenyl synthetase [Mycobacterium avium 104]
          Length = 395

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 15/246 (6%)

Query: 1   MNGGLPSK---------LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGK 51
           M   LP           L++         D  +++     +   N      + Y L GGK
Sbjct: 2   MTSTLPDARPAVAALNPLEDYLAACKQACDREIVRLYGSGERGSNGLYQLILDYPLRGGK 61

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            +R  L          +    L   A +E  H   LIHDD+   D  + RRGKPT+HI +
Sbjct: 62  ALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIE--DESWWRRGKPTLHIDH 119

Query: 112 DEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ 168
               A+  G+ +L+ + + +     +  L   +R  + + ++T        L    +   
Sbjct: 120 GVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHSN 179

Query: 169 DEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              +D+     + ++KT         ++GA+ A ++ +    L   G +LG  FQ+ DDL
Sbjct: 180 TWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGSTPDRMAPLESLGRHLGAAFQITDDL 239

Query: 228 LDCEED 233
           L+   D
Sbjct: 240 LNLRAD 245


>gi|199597413|ref|ZP_03210843.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
 gi|199591673|gb|EDY99749.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus rhamnosus
           HN001]
          Length = 322

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 18/225 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +R++ +      Q  + +Q Q N            GGK +RS L+   A     
Sbjct: 15  QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV  +     AI AG+ L    
Sbjct: 64  DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 121

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+++S    +  D   +  ++         G +  Q                    KT A
Sbjct: 122 FQLLSEQDPETVDLRTNARIMKR----IFMGEV-DQNGPSAPLIPTVNAYLSAISGKTAA 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A  +GA + H S  +K+    FG  LG+ FQ+ DDLLD  +
Sbjct: 177 LFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 221


>gi|256027542|ref|ZP_05441376.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           D11]
 gi|289765501|ref|ZP_06524879.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           D11]
 gi|289717056|gb|EFD81068.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           D11]
          Length = 326

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 20/234 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL------GGKKIRSFLVTECASLFNV-- 67
           I+ +L + + Q   ++    +  +  +   A+L       GK  RS L+  CA L +   
Sbjct: 2   IEILLKEWIEQIKYYIHLIADYSIKESQVGAVLDDVLNLSGKMFRSKLLLLCAFLGSNWK 61

Query: 68  -NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N     ++ A +E  H  SLIHDD+  +D+   RRGK ++  +Y +  A+ AG+ L+  
Sbjct: 62  NNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGKVSIQGKYGKDAAVFAGDFLMAR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
            F         +++   +  +LS T      G +  Q L    E I E + F   + KT 
Sbjct: 120 IF-----YYGAVENLNEAVSILSKTVEYMCIGEIE-QDLCRYQEDISEKKYFENIERKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           AL   A   GA  +  S+   ++L  F +NLG++FQL DD+LD      +L K+
Sbjct: 174 ALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNSKELGKE 227


>gi|300113550|ref|YP_003760125.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
 gi|299539487|gb|ADJ27804.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
          Length = 339

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 92/232 (39%), Gaps = 12/232 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
              S  +E   R+D  L+  +    S + +Q  + +   I+     GK+IR  LV     
Sbjct: 9   DFVSYWKETRTRLDQELNRQIPVLFSALGSQQIETIQQIIKD----GKRIRGCLVFLMNQ 64

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   +L    AIECI   SLIHDD   +D   IRR +P          A++ G+ +
Sbjct: 65  TQEGKPEDSLPRAVAIECIQAASLIHDD--YLDEDVIRRKRPATWTIEGPRRAVLLGDIM 122

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMI 180
              A + ++    +    +   +    T   G    L  Q    +      +++     I
Sbjct: 123 FATAIQSMAELSKEDGATVAHAIA---TVANGAYQELFWQTKTGKSRAHKLLEKDLYEHI 179

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +KTGAL   AC+ GAI A A Q        FG   G  +Q+ADDL D   
Sbjct: 180 IYLKTGALFGAACQLGAIAAGAHQEVSALAYAFGARTGEAYQIADDLEDFIA 231


>gi|188995807|ref|YP_001930059.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC
           33277]
 gi|188595487|dbj|BAG34462.1| putative polyprenyl synthetase [Porphyromonas gingivalis ATCC
           33277]
          Length = 324

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 14/234 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASL 64
           + L+     I+  + D        + +Q  + +  AI+  L G  GK +R  L    A++
Sbjct: 2   TTLEAIQAPINGFVKDFHHSFEHALDSQS-EWMTKAIK-ILNGSTGKHVRPLLTGLVAAV 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                + T L     +E IH  +LIHDD+  +D    RRG PT++  +D   A++ G+ +
Sbjct: 60  CAGKTNSTTLEAAVLLEMIHTATLIHDDV--IDMASTRRGVPTLNAFFDNRVAVLMGDFV 117

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L+ A       +    ++IR   ++S       +G +  Q        IDE     + + 
Sbjct: 118 LSSALM-----RAIALNDIRIITIISQLGRELSEGEIR-QFETADKVIIDEDIYMGVIRQ 171

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
           KT  L     E GAI   A     E+++  GE LG  FQ+ DD+ D    D+ K
Sbjct: 172 KTAMLFSACAEVGAITVQAPVEIVEKVKRVGELLGYAFQIRDDIFDYYRNDVGK 225


>gi|229821695|ref|YP_002883221.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
 gi|229567608|gb|ACQ81459.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
          Length = 334

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 19/227 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQ--HNDRLLSA-IRYAL-LGGKKIRSFLVTECASLFNVNH 69
             ++ ++ D L++    +       + L  A  R+ +  GGK++R  L    A L +   
Sbjct: 11  AALERVVADGLVEVERRLAAAVSSTEILADAPSRHLVNAGGKRMRPALALLTAQLGSGTS 70

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L    A+E  H  +L HDD+  MD+   RRG P+ H  +    AI+ G+ L   A  
Sbjct: 71  DAVLEAAVAVELTHLATLYHDDV--MDSAPTRRGAPSAHEVWGNSVAILTGDLLFARASR 128

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTG 186
           ++S       D +R Q           + +  GQ+ +       E        +   KTG
Sbjct: 129 LVSELG---PDAVRVQ-------AETFERLCLGQLHETIGPQDGEDAVEHYLDVLAGKTG 178

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +L+  + + GA+ +    +    +  +GE +G+ FQLADD++D   D
Sbjct: 179 SLIAASAQYGAMFSGVGADALGTVVRYGEKVGVAFQLADDVIDLLSD 225


>gi|291569742|dbj|BAI92014.1| polyprenyl synthetase family protein [Arthrospira platensis
           NIES-39]
          Length = 537

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 17/243 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECA 62
           +   L+++   I   + + + +    + +     D LL    Y   GGK +R  +    A
Sbjct: 179 INQALEDSRIAIGAKIQEFIGRRREIIGSYEPLYDLLLD---YPFRGGKMLRPTMCISAA 235

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    AL   AA+E  H   LIHDD+   D    RRGK T+H       AI  G+ 
Sbjct: 236 RAMGGMGQVALSTAAALELYHNAFLIHDDIE--DGSESRRGKGTLHHNIGIPRAINVGDA 293

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFM 179
               A  ++    + +       ++  +              LD   E    + +   F 
Sbjct: 294 TNVLAVGLLLENLSAIGVTKTLNVLHEIEFMARQSVEGQAMELDWVAENTQNLSDRDYFK 353

Query: 180 IQKMKT-GALMCFACESGAIMAHAS---QNEKERLR---CFGENLGIIFQLADDLLDCEE 232
           +   KT        C  G I+ ++S   Q+  E L     FG  LGI FQ+ DDLL+   
Sbjct: 354 MCVKKTCWYSFMTPCRIGLIVGNSSANPQDLVEPLAGVTRFGMILGIAFQIQDDLLNLVG 413

Query: 233 DLP 235
           D+ 
Sbjct: 414 DMK 416


>gi|308232443|ref|ZP_07664084.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001]
 gi|308379494|ref|ZP_07486502.2| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu010]
 gi|308380676|ref|ZP_07669246.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu011]
 gi|308406139|ref|ZP_07669521.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012]
 gi|308213955|gb|EFO73354.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu001]
 gi|308356823|gb|EFP45674.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu010]
 gi|308360773|gb|EFP49624.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu011]
 gi|308364378|gb|EFP53229.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu012]
          Length = 354

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 14/225 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 41  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++ 
Sbjct: 97  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTG 154

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 155 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 209

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             C  GA++A+A       L  FG  LG+ FQ  DDL+    D  
Sbjct: 210 CCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 254


>gi|259650464|dbj|BAI42626.1| polyprenyl synthetase [Lactobacillus rhamnosus GG]
          Length = 312

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 18/225 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +R++ +      Q  + +Q Q N            GGK +RS L+   A     
Sbjct: 5   QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 53

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV  +     AI AG+ L    
Sbjct: 54  DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 111

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+++S    +  D   +  ++         G +  Q                    KT A
Sbjct: 112 FQLLSEQDPETVDLRTNARIMKR----IFMGEV-DQNGPSAPLIPTVNAYLSAISGKTAA 166

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A  +GA + H S  +K+    FG  LG+ FQ+ DDLLD  +
Sbjct: 167 LFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 211


>gi|260495254|ref|ZP_05815382.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_33]
 gi|260197311|gb|EEW94830.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           3_1_33]
          Length = 326

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 14/194 (7%)

Query: 50  GKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK  RS L+  CA L +    N     ++ A +E  H  SLIHDD+  +D+   RRGK +
Sbjct: 42  GKMFRSKLLLLCAFLGSNWKNNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGKVS 99

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +  +Y +  A+ AG+ L+   F         +++   +  +LS T      G +  Q L 
Sbjct: 100 IQGKYGKDAAVFAGDFLMARIF-----YYGAVENLNEAVSILSKTVEYMCIGEIE-QDLC 153

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              E I E + F   + KT AL   A   GA  +  S+   ++L  F +NLG++FQL DD
Sbjct: 154 RYQEDISENKYFENIERKTAALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDD 213

Query: 227 LLDCEE---DLPKK 237
           +LD      +L K+
Sbjct: 214 ILDFTSNSKELGKE 227


>gi|159898866|ref|YP_001545113.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159891905|gb|ABX04985.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 326

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 18/236 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            +PS L+ + + ++  +   +   ++ +       + S       GGK++R+ +V   + 
Sbjct: 9   EIPSTLRHDLQAVEDRIMQRVESQSALITAAGQHIVSS-------GGKRLRAMMVLLASQ 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L       +L    A+E IH  SL+HDDL  +D+   RRGK TVH ++D+  A++ G+ L
Sbjct: 62  LGRYRLSDSLHAATAVELIHAASLVHDDL--VDDADRRRGKVTVHAKWDQGVALMVGDYL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   ++         I ++ +++++ +     M                Q +     
Sbjct: 120 FAVAAGEMALAPDPRVIQIFAESVMTISASELHPVMA------TLPTATALEQYYAKIGG 173

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           KT AL   A  +G +    S  E E    +G ++G+ FQ+ DD+LD    EE L K
Sbjct: 174 KTAALFEAAAAAGVVCGGGSPEEIEAAARYGYDIGLAFQIVDDILDFVSTEETLGK 229


>gi|325474098|gb|EGC77286.1| polyprenyl synthetase [Treponema denticola F0402]
          Length = 344

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 22/248 (8%)

Query: 8   KLQENSKRIDTILDDLLLQT-------------ASHMQTQHNDRLLSAIRYAL-LGGKKI 53
           +L+   + I+  LD  L +              A  +       +++ +R  +  GGK+ 
Sbjct: 3   ELKNRLEHIEKTLDCFLPEKINSSWISQSFGELAYGLPDSFFLNIINPVRDLVKRGGKRW 62

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           R  L      L   +   A  +   IE  H  SL+HDD+   D    RRG P  HI+Y  
Sbjct: 63  RPLLCVLSCELAEGDPEKAYPLTPLIEFCHTASLVHDDIE--DKSDTRRGAPAAHIKYGL 120

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DE 170
            TA+ + + L   A   +     +  +++R+++    + N+    +     +      D 
Sbjct: 121 DTALNSASWLYFEALNPL--INYEASESVRAEIYSLYSQNLRRLHLGQSMDIGWHSNPDI 178

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                +   +  +KTG+L   A E G I A    NE         ++GI FQ+ DD+ + 
Sbjct: 179 IPSVDEYITMISLKTGSLAKLAGELGFIAAGKPINEVLEYGKLMTDMGIGFQILDDVKNI 238

Query: 231 -EEDLPKK 237
            E +  K+
Sbjct: 239 TEGNAGKR 246


>gi|77405958|ref|ZP_00783037.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           H36B]
 gi|77411623|ref|ZP_00787964.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           CJB111]
 gi|77162340|gb|EAO73310.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           CJB111]
 gi|77175410|gb|EAO78200.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           H36B]
          Length = 326

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 12/234 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S    N   +   +D+        +Q ++ D   +  +    GGK++R       + L N
Sbjct: 2   SSYWNNYPELKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGN 61

Query: 67  V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +     ++ A++E +H  +LIHDD+  +D+  +RRG  T+  ++ +  A+  G+ L
Sbjct: 62  KENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNMTIQSKFGKDIAVYTGDLL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T  F++I               + + +    L G L  QM    ++             
Sbjct: 120 FTVFFDLILESMADTP----FMTINAKSMRKILMGEL-DQMHLRYNQQQGIHHYLRAISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           KT  L   A + GA    A +         G N+G+ FQ+ DD+LD   D  KK
Sbjct: 175 KTAELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTAD--KK 226


>gi|219964684|gb|ACL68406.1| polyprenyl diphosphate synthase [Streptomyces peucetius ATCC 27952]
          Length = 314

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 23  GGKAVRPALALLSAEAAGAAPEVGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 80

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 81  KVHGPAQAILVGDALFALANEVLLEIGTVEAG--RATRRLTTATRKLIDGQAQDISYEHR 138

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 139 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLESYGYHLGLAFQAVDDLL 197

Query: 229 DCEED 233
               D
Sbjct: 198 GIWGD 202


>gi|320334064|ref|YP_004170775.1| trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM
           21211]
 gi|319755353|gb|ADV67110.1| Trans-hexaprenyltranstransferase [Deinococcus maricopensis DSM
           21211]
          Length = 316

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 21/233 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MNG L       +   +  L ++L      ++   +D +         GGK+ R  L   
Sbjct: 1   MNGALSFP----TDAFEARLREVLRSQVEFIELIGDDLV-------TAGGKRTRPALTYL 49

Query: 61  CASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                 ++ H     V  A+E +H  SL+HDDL  +D+   RRG PT   ++  V ++++
Sbjct: 50  AFRALGLDAHPQEHDVAVAVELLHSASLLHDDL--IDDADTRRGAPTAFRRFGNVVSVMS 107

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ +L+    +++S    L            T     +G +    +    E+        
Sbjct: 108 GDYMLSKLLVLLASTTPGLV------RAFGETAAHVCEGEVLQFQVAAYGEY-SHEHYLN 160

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KT AL+  A  + A++  AS   +  L  FG   G+ FQ+ DDLLD   
Sbjct: 161 VIYGKTAALVELAASAPALLVGASDAHQRALADFGREYGMAFQMQDDLLDLAG 213


>gi|330901423|gb|EGH32842.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 262

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 8/168 (4%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  + A IE +H  +L+HDD+  M    +RRG+ T +  +    +++ G+ L + +
Sbjct: 2   EGDDVRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTANALWGNAPSVLVGDFLYSRS 59

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           FE++    +     +    +LS    I  +G +  Q+  I+D    E     + + KT  
Sbjct: 60  FEMMVELGS-----MEVMKILSKATRIIAEGEVL-QLSKIRDASTTEETYMEVIRGKTAM 113

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L   +  S A + +A Q + E LR FG++LG+ FQL DDLLD   D  
Sbjct: 114 LFEASTHSAAALCNAPQEQSEALRTFGDHLGVAFQLVDDLLDYRGDAE 161


>gi|320007257|gb|ADW02107.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 367

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 76  GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 134 KVHGPAQAILVGDALFALANEVLLELGTVEAG--RAARRLTTASRKLIDGQAQDISYEHR 191

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 192 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLL 250

Query: 229 DCEED 233
               D
Sbjct: 251 GIWGD 255


>gi|238853177|ref|ZP_04643564.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
 gi|238834231|gb|EEQ26481.1| farnesyltranstransferase [Lactobacillus gasseri 202-4]
          Length = 338

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 18/190 (9%)

Query: 49  GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GK +R   V      F  +    H    ++  +IE +H  +LIHDD+  +D   +R G+
Sbjct: 54  PGKMLRPACVMLFG-AFGPDADQKHDELQKIATSIETLHNATLIHDDI--IDESSMRHGR 110

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P++  +Y +  A+ AG+ L   +  ++S     L   I             +Q +L G+ 
Sbjct: 111 PSIQTKYGKHIAVYAGDYLFALSLTLLSENAQSLHSVI--------ADGKTMQNILVGET 162

Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               + +   I E +     K KTG L   AC  GA  +     +  + + FGE LG  F
Sbjct: 163 EQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAYESGIKVTKALKAKKFGEYLGQAF 222

Query: 222 QLADDLLDCE 231
           QL DD+LD  
Sbjct: 223 QLRDDILDYT 232


>gi|294814941|ref|ZP_06773584.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
 gi|294327540|gb|EFG09183.1| Putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 405

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 13/192 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+    A+E  H +SL+HDD+  +D    RR +PT   
Sbjct: 121 GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 178

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AIIAG+ L++ A  I++            +L      +  +  +  GQ  D   
Sbjct: 179 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRL------SACMIELCAGQQADCAF 232

Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  +C  GA+ A A       L  FG   G+ FQL 
Sbjct: 233 EGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLI 292

Query: 225 DDLLDCEEDLPK 236
           DDL+    D  +
Sbjct: 293 DDLIGIWGDPGR 304


>gi|254777239|ref|ZP_05218755.1| GAF domain-containing protein [Mycobacterium avium subsp. avium ATCC
            25291]
          Length = 1804

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 15/246 (6%)

Query: 1    MNGGLPSK---------LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGK 51
            M   LP           L++         D  +++     +   N      + Y L GGK
Sbjct: 1411 MTSTLPDARPAVAALNPLEDYLAACKQACDREIVRLYGPGERGSNGLYQLILDYPLRGGK 1470

Query: 52   KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
             +R  L          +    L   A +E  H   LIHDD+   D  + RRGKPT+HI +
Sbjct: 1471 ALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIE--DESWWRRGKPTLHIDH 1528

Query: 112  DEVTAIIAGNGLLTYAFEIISSPKTQL---KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                A+  G+ +L+ + + +     ++         + + ++T        L    +   
Sbjct: 1529 GVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHSN 1588

Query: 169  DEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               +D+     + ++KT         ++GA+ A A+ +    L   G +LG  FQ+ DDL
Sbjct: 1589 TWRLDDADYLEMVELKTSWYSFITPLQAGAVAAGATPDRMAPLESLGRHLGAAFQITDDL 1648

Query: 228  LDCEED 233
            L+   D
Sbjct: 1649 LNLRAD 1654


>gi|237743842|ref|ZP_04574323.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           7_1]
 gi|229432873|gb|EEO43085.1| heptaprenyl diphosphate synthase component II [Fusobacterium sp.
           7_1]
          Length = 326

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 20/234 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL------GGKKIRSFLVTECASLFNV-- 67
           I+ +L + + Q   ++    +  +  +   A+L       GK  RS L+  CA L +   
Sbjct: 2   IEILLKEWIEQIKYYIHLIADYSIKESQVGAVLDDVLNLSGKMFRSKLLLLCAFLGSNWK 61

Query: 68  -NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            N     ++ A +E  H  SLIHDD+  +D+   RRGK ++  +Y +  A+ AG+ L+  
Sbjct: 62  NNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGKVSIQGKYGKDAAVFAGDFLMAR 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
            F         +++   +  +LS T      G +  Q L    E I E + F   + KT 
Sbjct: 120 IF-----YYGAVENLNEAVSILSKTVEYMCIGEIE-QDLCRYQEDISEKKYFKNIERKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
           AL   A   GA  +  S+   ++L  F +NLG++FQL DD+LD      +L K+
Sbjct: 174 ALFQAASYIGAKESGCSEEIIQKLELFVKNLGLMFQLKDDILDFTSNPKELGKE 227


>gi|11467329|ref|NP_043186.1| prenyl transferase [Cyanophora paradoxa]
 gi|399307|sp|P31171|PREA_CYAPA RecName: Full=Prenyl transferase
 gi|336639|gb|AAA65472.1| prephytoene pyrophosphate dehydrogenase [Cyanophora paradoxa]
 gi|1016130|gb|AAA81217.1| prenyl transferase [Cyanophora paradoxa]
          Length = 323

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 16/228 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH---LT 71
           ++  LD LL +    +    +  L +A  +     GK+ R  +V   +     N      
Sbjct: 11  VENELD-LLTKNLKKLVGSGHPILSAASEHLFSASGKRPRPAIVLLISKATMENEIITSR 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  +    AI+AG+ L   +   +
Sbjct: 70  HRRLAEITEIIHTASLVHDDI--LDESDVRRGIPTVHSDFGTKIAILAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++ ++     + S+++         +G+      +     +   +       KT +L+  
Sbjct: 128 ANLESLEVVKLISKVITDFAEGEIRRGL------NQFKVDLTLEEYLEKSFYKTASLLAA 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           + ++ A+++H        L  +G +LG+ FQ+ DD+LD     E+L K
Sbjct: 182 SSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGK 229


>gi|297623348|ref|YP_003704782.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093]
 gi|297164528|gb|ADI14239.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093]
          Length = 338

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 13/235 (5%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L E  + +D  +   L QT  H        LL    Y   GGK++R  L+    +    
Sbjct: 3   ELSELQRALDEAIFRELPQTHPHPDVSAFYALLR--DYPARGGKRLRGTLLLLSTAAHGA 60

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L V AA+E    + LIHDD+   D+   RRG+P +H       A+  G+ L  Y 
Sbjct: 61  PWERGLNVAAALELFQNWVLIHDDIE--DDSEDRRGRPALHRTAGVPVALNVGDALHIYM 118

Query: 128 FE-IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQ 181
           +  ++   +   +    +   L       +     GQ LD+         I E     + 
Sbjct: 119 WRTLLRELRGDARAAPETLPRLLEAFEWMISRTAEGQHLDLTWVAEGRFEISEAAYLEMV 178

Query: 182 KMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +KT    +    E GA+ A A  +   RLR  GE+LG+ FQ+ DD+L+   D+ 
Sbjct: 179 TLKTAYYTVVGPLELGALCAGAEPD--PRLRRAGEDLGVAFQIRDDVLNLMADVA 231


>gi|284051507|ref|ZP_06381717.1| polyprenyl synthetase [Arthrospira platensis str. Paraca]
          Length = 537

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 17/243 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECA 62
           +   L+++   I   + + + +    + +     D LL    Y   GGK +R  +    A
Sbjct: 179 INQALEDSRIAIGAKIQEFIGRRREIIGSYEPLYDLLLD---YPFRGGKMLRPTMCISAA 235

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    AL   AA+E  H   LIHDD+   D    RRGK T+H       AI  G+ 
Sbjct: 236 RAMGGMGQVALSTAAALELYHNAFLIHDDIE--DGSESRRGKGTLHHNIGIPRAINVGDA 293

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFM 179
               A  ++    + +       ++  +              LD   E    + +   F 
Sbjct: 294 TNVLAVGLLLENLSAIGVTKTLNVLHEIEFMARQSVEGQAMELDWVAENTQNLSDRDYFK 353

Query: 180 IQKMKT-GALMCFACESGAIMAHAS---QNEKERLR---CFGENLGIIFQLADDLLDCEE 232
           +   KT        C  G I+ ++S   Q+  E L     FG  LGI FQ+ DDLL+   
Sbjct: 354 MCVKKTCWYSFMTPCRIGLIVGNSSANPQDLVEPLAGVTRFGMILGIAFQIQDDLLNLVG 413

Query: 233 DLP 235
           D+ 
Sbjct: 414 DMK 416


>gi|21328588|gb|AAM48595.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
           proteobacterium]
 gi|40062988|gb|AAR37858.1| geranylgeranyl pyrophosphate synthetase [uncultured marine
           bacterium 443]
          Length = 292

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 14/221 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTALR 74
           +  L++ + +   H   Q    L  A+ YA+  GG ++R  +    A   N  +   A  
Sbjct: 9   EQYLEEAMAE---HATAQCPPLLAQALNYAVFPGGARVRPKICKAVALANNSSDVGLANA 65

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             +AIE +HC SL+HDDLP  D+   RRGKP+VH ++ E  A++ G+ L+  AF+ +++ 
Sbjct: 66  AASAIELLHCASLVHDDLPCFDDATQRRGKPSVHAKFGERIAVLTGDALIVAAFQTLATH 125

Query: 135 KTQLKDNIRSQLMLSL-THNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                   R  L+ ++    +G   G+  GQ  + +        +    + KTGAL   A
Sbjct: 126 AIHAVRTERVPLVTAIVARGVGAPHGICAGQAWECERS----VDLSRYHRAKTGALFVAA 181

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +GA  A         L   G ++G  +Q+ADD+ D   D
Sbjct: 182 TCAGAAAAGVDPGPWVNL---GASIGEAYQVADDIKDAISD 219


>gi|255520793|ref|ZP_05388030.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
           J1-175]
          Length = 157

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 4/153 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  S    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEISERNIE--PRLKESMLYSVQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           ++  +  L    R  L+  ++ + G +GM+GGQ
Sbjct: 125 LAEDEN-LSFETRIALINQISFSSGAEGMVGGQ 156


>gi|289581060|ref|YP_003479526.1| polyprenyl synthetase [Natrialba magadii ATCC 43099]
 gi|289530613|gb|ADD04964.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099]
          Length = 280

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 17/226 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNH 69
           E  +R   ++++ L +    +     + L   +R+  L GGK++R  +            
Sbjct: 2   ELLERRRALIEERLHEVVDGVD---PETLSDEVRHVTLSGGKRVRPMVTILACETVGGTA 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A+  G  IE +H  SL+ DD+  +D   +RRG  +   ++    AII  +GLL  AF+
Sbjct: 59  EDAVEFGVGIELVHNASLVIDDI--IDRSELRRGTESAWAEFGYGPAIITSDGLLGEAFD 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           + +S      D +R            +  +  G+  ++     +E +   + + KTGAL 
Sbjct: 117 LFASD----PDAMRVV-------TESMVELGVGEATELSAMPSNEEEYMTLARRKTGALF 165

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             A E GAI A +     E L  + E +GI FQ+ DD+LD   D  
Sbjct: 166 RAAAELGAIAADSDAVTVEALGEYAERVGIAFQIRDDVLDAVADAE 211


>gi|11322965|emb|CAC16849.1| geranyl diphosphate synthase [Arabidopsis thaliana]
          Length = 422

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 38/260 (14%)

Query: 3   GGLPSKL-QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL---LG 49
           GG   +L  ++S  ++  LD          LL      M      +L SA  Y     + 
Sbjct: 64  GGFSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQ 123

Query: 50  GKKIRSFLVTECASLFNVNHLTALR-----------------VGAAIECIHCYSLIHDDL 92
           GK+ RS ++   A+  +V    AL                  +    E IH  SL+HDD+
Sbjct: 124 GKQFRSTILLLMATALDVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV 183

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D+   RRG  ++++      +++AG+ LL+ A   +++ K      + +  +  L  
Sbjct: 184 --LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVT 241

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              +      ++    ++             KT +L+  +C++ A++   +         
Sbjct: 242 GETM------EITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFE 295

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +G NLG+ FQL DD+LD   
Sbjct: 296 YGRNLGLAFQLIDDILDFTG 315


>gi|291449099|ref|ZP_06588489.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291352046|gb|EFE78950.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 367

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 76  GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A++++    T      R+   L+      + G       + +
Sbjct: 134 KVHGPAQAILVGDALFALAYDLLLELGTVEAG--RAARRLTTATRKLIDGQAQDISYEHR 191

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 192 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLL 250

Query: 229 DCEED 233
               D
Sbjct: 251 GIWGD 255


>gi|320531898|ref|ZP_08032809.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135889|gb|EFW27926.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 368

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 18/241 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G LP    E   RI   L  +  +    + +            A  GGK++R  L   
Sbjct: 1   MIGSLPLSAPELESRIIPALQTIEDRLMEVVTSADETINPPTSHLAEAGGKRLRPVLALL 60

Query: 61  CASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            A L +            G A+E  H  +L HDD+  MD   +RRG P+    +    AI
Sbjct: 61  TAQLGDPALATGEQIRDAGVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWGNSAAI 118

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDE 174
           + G+ L+  A +++++   +            + H    + +  GQ+ +           
Sbjct: 119 LTGDVLVARASQLVAALSPEAV----------MAHAKTFERLCMGQLHETLPRPSGTDPV 168

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                +   KTG+L+  +   GA++  A    ++ +  FGE +G+ FQLADD++D   D 
Sbjct: 169 DHYIQVLADKTGSLIAVSARYGAMLTDAGVRTEQIVEEFGERIGVAFQLADDVIDLMSDS 228

Query: 235 P 235
            
Sbjct: 229 A 229


>gi|22537877|ref|NP_688728.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           2603V/R]
 gi|76799379|ref|ZP_00781535.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           18RS21]
 gi|77408798|ref|ZP_00785527.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           COH1]
 gi|22534773|gb|AAN00601.1|AE014270_19 polyprenyl synthetase family protein [Streptococcus agalactiae
           2603V/R]
 gi|76585273|gb|EAO61875.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           18RS21]
 gi|77172579|gb|EAO75719.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           COH1]
          Length = 326

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 12/234 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S    N   +   +D+        +Q ++ D   +  +    GGK++R       + L N
Sbjct: 2   SSYWNNYPELKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGN 61

Query: 67  V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +     ++ A++E +H  +LIHDD+  +D+  +RRG  T+  ++ +  A+  G+ L
Sbjct: 62  KENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNMTIQSKFGKDIAVYTGDLL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T  F++I               + + +    L G L  QM    ++             
Sbjct: 120 FTVFFDLILESMADTP----FMRINAKSMRKILMGEL-DQMHLRYNQQQGIHHYLRAISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           KT  L   A + GA    A +         G N+G+ FQ+ DD+LD   D  KK
Sbjct: 175 KTAELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTAD--KK 226


>gi|257388648|ref|YP_003178421.1| polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257170955|gb|ACV48714.1| Polyprenyl synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 344

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 107/250 (42%), Gaps = 24/250 (9%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF 65
           ++ ++    I    + +       +     + L  A RY +  GGK++R  ++   A   
Sbjct: 2   ARQEDVEAAIVARREQVNDAIERELPVDEPEELYEASRYLMDAGGKRLRPTMLLLAAESL 61

Query: 66  ----------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                             + +  +R    IE I  ++LIH     MD+  +RRG P VH 
Sbjct: 62  ADVAPQSTDYRSFPTVEGDEIDVMRAAVGIETIQSFTLIH--DDIMDDDDLRRGVPAVHR 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +YD  TAI+AG+ L + AFE +     + + ++ +   L+ T     +G       + + 
Sbjct: 120 EYDLSTAILAGDTLFSKAFEYMLDTGAKAERSVAATKRLAQTCTEICEGQSFDIDFESRA 179

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           E   +  + M++ +KT  L   +    A +  A ++  E L  +G ++G  FQ+ DDLLD
Sbjct: 180 EVTTDEYLDMVE-LKTAVLYAASASIPAQLMGA-EDAVEPLYGYGLDVGRAFQIQDDLLD 237

Query: 230 CE---EDLPK 236
                E L K
Sbjct: 238 LTTPSEKLGK 247


>gi|182412460|ref|YP_001817526.1| polyprenyl synthetase [Opitutus terrae PB90-1]
 gi|177839674|gb|ACB73926.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
          Length = 341

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 14/221 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA-SLFNVNHLTALRV 75
             LD  L    S  + +    + S   Y +   GK+IR  LV         +     +RV
Sbjct: 28  AALDTFLAGQISAFEPE----IRSMADYCIDTSGKRIRPALVFLGGWRGNGMVAPDLVRV 83

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A +E +H  +L+HDD+  MD   +RR + T   ++    A++ G+ L  +A  + +   
Sbjct: 84  AAVVELVHLATLVHDDI--MDGAEVRRNRRTAAREFGAAGAVLLGDALFAHALHLAAQFP 141

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           T       S+    +     +Q +  G         +     F I  +KT  L   +C  
Sbjct: 142 TTEVCAAVSESTRRVVSGEIVQTLRRGTT------NVSRADYFRIIDLKTAELFRVSCFL 195

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GA +A ++    E +  FGE+LG+ +Q+ DDL D      K
Sbjct: 196 GARLAGSAPGYVEAVSRFGEHLGVAYQIYDDLADYFGQEAK 236


>gi|197121567|ref|YP_002133518.1| polyprenyl synthetase [Anaeromyxobacter sp. K]
 gi|196171416|gb|ACG72389.1| Polyprenyl synthetase [Anaeromyxobacter sp. K]
          Length = 293

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 87/246 (35%), Positives = 123/246 (50%), Gaps = 20/246 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M    P  ++   + +   ++  L   A         RL+ A+RYALLGG K++R  LV 
Sbjct: 1   MTTPFP--IEAYLRSVAERVEPRLAALADARAPGGPPRLVEAMRYALLGGGKRMRPALVL 58

Query: 60  ECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
                   +   A   +R   A+E IH YSL+HDDLP+MD+  +RRG+PTVH  YDE TA
Sbjct: 59  AACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEPTA 118

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174
           ++ G+GL + AF  + +      D   + L   L  N  L  M+ GQ  D+  E   + E
Sbjct: 119 VLVGDGLQSLAFAHLLAS----PDPAAAPLARLLAENAQL--MVEGQARDMAGEHARLGE 172

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
            +V  + + KTGAL+  A   GA  A       E +   G  LG+ FQ+ADDLLD   D 
Sbjct: 173 AEVMELMRTKTGALLAAAVAGGARCAGVP---VEAVYPVGLKLGLAFQIADDLLDLTADA 229

Query: 234 --LPKK 237
             L K+
Sbjct: 230 ATLGKR 235


>gi|158288633|ref|XP_565746.3| AGAP000591-PA [Anopheles gambiae str. PEST]
 gi|157018662|gb|EAL41155.3| AGAP000591-PA [Anopheles gambiae str. PEST]
          Length = 346

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 18/222 (8%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-------- 70
           I +D+  + +     Q  +++  A+ Y    GK  R  +    A   N +          
Sbjct: 34  IFEDIRQEISRATNHQELNKI--AVYYFDGQGKAFRPMVAILMAKALNYHMHNENSDVMN 91

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
              ++    E IH  SL+HDD+  +D  + RRGKP+V++ ++      AG+ +L  A  +
Sbjct: 92  AQRQIAMISEMIHTASLVHDDV--IDQSFARRGKPSVNVLWNHKKVTQAGDYILAVASML 149

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++  K     +I SQ++  L     +      Q+   + E       F     KT +L+ 
Sbjct: 150 LARLKHDEVTHILSQVLTDLVQGEFM------QLGSKETENERFAHYFTKTYRKTASLIA 203

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + ++ A+++ A +   E    +G NLG+ FQ  DDLLD   
Sbjct: 204 NSLKAVAVLSGADEQMAELSFQYGRNLGLAFQFVDDLLDFVS 245


>gi|31794563|ref|NP_857056.1| polyprenyl synthetase IdsB [Mycobacterium bovis AF2122/97]
 gi|121639307|ref|YP_979531.1| putative polyprenyl synthetase idsB [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148824590|ref|YP_001289344.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11]
 gi|215405406|ref|ZP_03417587.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 02_1987]
 gi|215428885|ref|ZP_03426804.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
 gi|215432351|ref|ZP_03430270.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
 gi|219559456|ref|ZP_03538532.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
 gi|224991804|ref|YP_002646493.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253800429|ref|YP_003033430.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435]
 gi|254365996|ref|ZP_04982041.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str.
           Haarlem]
 gi|260188437|ref|ZP_05765911.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
 gi|260202541|ref|ZP_05770032.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
 gi|260206746|ref|ZP_05774237.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
 gi|289444961|ref|ZP_06434705.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
 gi|289449079|ref|ZP_06438823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
 gi|289555659|ref|ZP_06444869.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605]
 gi|289571618|ref|ZP_06451845.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
 gi|289576114|ref|ZP_06456341.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
 gi|289747205|ref|ZP_06506583.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987]
 gi|289752097|ref|ZP_06511475.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
 gi|289755512|ref|ZP_06514890.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
 gi|297636043|ref|ZP_06953823.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207]
 gi|297733042|ref|ZP_06962160.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN R506]
 gi|306805203|ref|ZP_07441871.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008]
 gi|306969495|ref|ZP_07482156.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009]
 gi|313660374|ref|ZP_07817254.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN V2475]
 gi|31620159|emb|CAD95588.1| POSSIBLE POLYPRENYL SYNTHETASE IDSB (POLYPRENYL TRANSFERASE)
           (POLYPRENYL DIPHOSPHATE SYNTHASE) [Mycobacterium bovis
           AF2122/97]
 gi|121494955|emb|CAL73441.1| Possible polyprenyl synthetase idsB [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134151509|gb|EBA43554.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148723117|gb|ABR07742.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis F11]
 gi|224774919|dbj|BAH27725.1| putative polyprenyl synthetase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321932|gb|ACT26535.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 1435]
 gi|289417880|gb|EFD15120.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T46]
 gi|289422037|gb|EFD19238.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CPHL_A]
 gi|289440291|gb|EFD22784.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 605]
 gi|289540545|gb|EFD45123.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis K85]
 gi|289545372|gb|EFD49020.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T17]
 gi|289687733|gb|EFD55221.1| polyprenyl synthetase IdsB [Mycobacterium tuberculosis 02_1987]
 gi|289692684|gb|EFD60113.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T92]
 gi|289696099|gb|EFD63528.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis EAS054]
 gi|308348256|gb|EFP37107.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu008]
 gi|308352981|gb|EFP41832.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu009]
 gi|328460161|gb|AEB05584.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis KZN 4207]
          Length = 350

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 14/225 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++ 
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTG 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 151 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 205

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             C  GA++A+A       L  FG  LG+ FQ  DDL+    D  
Sbjct: 206 CCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 250


>gi|229553018|ref|ZP_04441743.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
           LMS2-1]
 gi|229313640|gb|EEN79613.1| possible trans-hexaprenyltranstransferase [Lactobacillus rhamnosus
           LMS2-1]
          Length = 312

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 18/225 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +R++ +      Q  + +Q Q N            GGK +RS L+   A     
Sbjct: 5   QLEQIQQRLEQVATLREPQVHTLIQQQIN-----------AGGKMLRSGLMLMLARFGEP 53

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           ++   +  GAAIE +H  +L+HDD+  +D+  IRRG  TV  +     AI AG+ L    
Sbjct: 54  DNAELVTAGAAIEALHLATLVHDDV--LDHADIRRGMTTVSAESGNREAIYAGDFLFAIY 111

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F+++S    +  D   +  ++         G +  Q                    KT A
Sbjct: 112 FQLLSEQDPETVDLRTNARIMKR----IFMGEV-DQNGPSAPLIPTVNAYLSAISGKTAA 166

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A  +GA + H S  +K+    FG  LG+ FQ+ DDLLD  +
Sbjct: 167 LFALATYTGATIGHLSATQKKAAYRFGRQLGMAFQMIDDLLDYTQ 211


>gi|305433092|ref|ZP_07402248.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20]
 gi|304443793|gb|EFM36450.1| octaprenyl-diphosphate synthase [Campylobacter coli JV20]
          Length = 297

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 26/219 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DDL+ Q    +   +   L   +      GKK+RS L+   A      +  + ++ AAI
Sbjct: 4   IDDLIKQYLQEL--DYEPIL--TMLANTKSGKKLRSKLLLAIA----GENANSYKICAAI 55

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S       
Sbjct: 56  ELIHLASLLHDDI--IDESKLRRGAKSVNAEFGTKNALMLGDILYSKAFYELSQLDACFA 113

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESG 196
             I          +  +  +  G+++D++       D+ +   +   KT  L+  +   G
Sbjct: 114 SII----------SDAVVKLAVGELMDVELSKSFNADKDKYLKMIYNKTAVLIEASARCG 163

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           AI+A+  +   +    +G+NLG+ FQ+ DD+LD + D  
Sbjct: 164 AILANLDE---KAFGEYGKNLGLAFQMIDDILDIKGDEK 199


>gi|284166593|ref|YP_003404872.1| polyprenyl synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016248|gb|ADB62199.1| Polyprenyl synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 280

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 17/224 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNH 69
           E  +R   ++++ L++    ++    D L + + + AL GGK++R  +            
Sbjct: 2   ELLERRRALIEERLVEVVDDLE---PDALRAEVEHTALAGGKRVRPMVTVLACETVGGTA 58

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A+  G  IE +H  SL+ DD+  +D   +RRG  +   ++    AI++ +GLL  AF 
Sbjct: 59  EDAVDFGVGIELVHAASLVVDDI--IDRSELRRGTTSAWAEFGYGPAIVSSDGLLGEAFA 116

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           + SS               +      +  +  G+  ++  E   E +   + + KTGAL 
Sbjct: 117 LFSSDPD-----------ATRVVAEAMVELGIGEATELSAEPETEAEYMTLARRKTGALF 165

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A E GAI A +     E L  + E +G+ FQ+ DD+LD   D
Sbjct: 166 RAAAELGAIAAGSDAVTVEALGEYAERVGVAFQIRDDVLDAIAD 209


>gi|300866343|ref|ZP_07111044.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506]
 gi|300335648|emb|CBN56204.1| trans-hexaprenyltranstransferase [Oscillatoria sp. PCC 6506]
          Length = 323

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 94/222 (42%), Gaps = 15/222 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHL--- 70
           ++  L  LL +    +    +  L +A  + L G  GK++R  +V   +     N     
Sbjct: 11  VEEDL-RLLTENLKQLVGARHPILYAAAEH-LFGAKGKRVRPAIVLLISRATMPNQEISP 68

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
              R+    E IH  SL+H     +D+  +RRG PTVH  +    A++AG+ L   +   
Sbjct: 69  KHRRLAEITEMIHTASLVH--DDVVDDSDVRRGIPTVHSYFGNRVAVLAGDFLFAQSSWY 126

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +++        + S++++ L            Q L+  D  +           KT +L+ 
Sbjct: 127 LANLDNLEVVKLLSEVIMDLAEGEI------QQGLNGFDTTLSIEAYLEKSYYKTASLIA 180

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + ++   ++  S    + L  +G ++G+ FQ+ DD+LD   
Sbjct: 181 NSSKAAGCLSGVSAQLADDLYNYGRDIGLAFQIVDDILDFTG 222


>gi|297192159|ref|ZP_06909557.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197720196|gb|EDY64104.1| polyprenyl diphosphate synthase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 345

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV         +   A+R  AA+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 61  GKAVRPALVLAACQALGGDPRQAVRAAAAVELAHNFTLLHDDV--IDEDPTRRHRPTAWS 118

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AIIAG+ +   A  +++  +         +L         +  +  GQ  D   
Sbjct: 119 VFGTADAIIAGDAMSALALRLLAEDRHPASGPAAVRL------AACVIELCAGQQADCAF 172

Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  AC  GA+ A A + +   +  FG   G+ FQL 
Sbjct: 173 EERPPLEVTLEECLAMATAKTGALLGCACALGALYAGADEEQAAAMDAFGREAGLAFQLI 232

Query: 225 DDLLDCEED 233
           DDL+    D
Sbjct: 233 DDLIGIWGD 241


>gi|283954169|ref|ZP_06371694.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794448|gb|EFC33192.1| polyprenyl synthetase family protein [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 297

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           ++ID ++   L +                +   +  GKK+RS L+   A         A 
Sbjct: 2   QKIDDLIKQFLQELDYEPILN--------MLLNVKSGKKLRSKLLLAIAE----ESEIAF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ A+IE IH  SL+HDD+  +D   +RRG  +V+ ++    A++ G+ L + AF  +S 
Sbjct: 50  KICASIELIHLASLLHDDI--IDESELRRGSRSVNAEFGTKNALMLGDILYSKAFYELS- 106

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                K + R   ++S        G L    L  +   I++     +   KT  L+  + 
Sbjct: 107 -----KVDTRFASIISDAVVKLAIGELMDVNL-GEKFNINKEAYLKMIYNKTAILIEASA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             GAI+A   + +      +G+NLG+ FQ+ DD+LD + D  
Sbjct: 161 RCGAILARLHEKD---FAEYGKNLGLAFQMIDDILDIKSDEK 199


>gi|220916330|ref|YP_002491634.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954184|gb|ACL64568.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 293

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 87/246 (35%), Positives = 122/246 (49%), Gaps = 20/246 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M    P  ++   + +   ++  L   A         RL+ A+RYALLGG K++R  LV 
Sbjct: 1   MTTPFP--IEAYLRSVAERVEPRLAALADARAPGGPPRLVEAMRYALLGGGKRMRPALVL 58

Query: 60  ECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
                   +   A   +R   A+E IH YSL+HDDLP+MD+  +RRG+PTVH  YDE TA
Sbjct: 59  AACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLPAMDDDDLRRGRPTVHKAYDEPTA 118

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174
           ++ G+GL + AF  + +      D   + L   L  N  L  M+ GQ  D+  E   + E
Sbjct: 119 VLVGDGLQSLAFAHLLAS----PDPAAAPLARLLAENAQL--MVEGQARDMAGEHARLGE 172

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
            +V  + + KTGAL+  A   GA  A       E     G  LG+ FQ+ADDLLD   D 
Sbjct: 173 AEVMELMRTKTGALLAAAVAGGARCAGVP---VEAAYPVGLKLGLAFQIADDLLDLTADA 229

Query: 234 --LPKK 237
             L K+
Sbjct: 230 ATLGKR 235


>gi|162451281|ref|YP_001613648.1| trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56']
 gi|161161863|emb|CAN93168.1| Trans-octaprenyltranstransferase [Sorangium cellulosum 'So ce 56']
          Length = 336

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 8/231 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L ++L E  + +D  L D+  + A            SA     L GK++R   V   +
Sbjct: 8   DALAARLAELRRLLDGDLGDIEREIAKVGLDGETPAHRSARHLLGLNGKRLRPICVALAS 67

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            + +  +  A     A+E +H  +L+HDD+  +D G  RRG     + Y    +I  G+ 
Sbjct: 68  HIGSGFNDAARTFAVAVELVHNATLLHDDV--VDLGDRRRGADAARVIYGNAASIFGGDY 125

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL  A   I +            ++  +     LQ    G++          ++ F I  
Sbjct: 126 LLLDALSKIQAVGMTDVLERVLLVIKEMVVAEALQLASRGRV------RTSTSEYFQIVD 179

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT +L  +A  +GA     ++   + L  FG +LG+ FQL DD+LD   D
Sbjct: 180 GKTASLFRWAMFAGARAGGVNEPLCKALESFGTSLGVAFQLVDDVLDFAGD 230


>gi|15842975|ref|NP_338012.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|254233984|ref|ZP_04927309.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C]
 gi|308370246|ref|ZP_07666898.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002]
 gi|308371326|ref|ZP_07667135.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003]
 gi|308372523|ref|ZP_07667397.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004]
 gi|308373727|ref|ZP_07667640.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu005]
 gi|308374857|ref|ZP_07667880.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu006]
 gi|308376100|ref|ZP_07668191.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007]
 gi|13883314|gb|AAK47826.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|124599513|gb|EAY58617.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis C]
 gi|308324901|gb|EFP13752.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu002]
 gi|308329132|gb|EFP17983.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu003]
 gi|308332967|gb|EFP21818.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu004]
 gi|308336584|gb|EFP25435.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu005]
 gi|308340457|gb|EFP29308.1| polyprenyl synthetase superfamily [Mycobacterium tuberculosis
           SUMu006]
 gi|308344324|gb|EFP33175.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis SUMu007]
          Length = 354

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 14/225 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 41  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++ 
Sbjct: 97  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTG 154

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 155 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 209

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             C  GA++A+A       L  FG  LG+ FQ  DDL+    D  
Sbjct: 210 CCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 254


>gi|115378176|ref|ZP_01465349.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella
           aurantiaca DW4/3-1]
 gi|310821415|ref|YP_003953773.1| polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115364808|gb|EAU63870.1| heptaprenyl diphosphate synthasecomponent II [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394487|gb|ADO71946.1| Polyprenyl synthase family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 332

 Score =  151 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 14/224 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-G-KKIRSFLVTECASLFNVNHLTAL 73
           ++  L  +L+   +       D L+ A R+  LG G K+ R  LV+       ++    +
Sbjct: 14  VEQQLGAVLVDGDAG-PGVMGDTLMEAARHLCLGSGSKRARPMLVSLFGDAVGLSSEHLV 72

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V  + E IH  SL+HDD+  +D G  RRG+PTV+ ++  + A+++G+ +L+     ++ 
Sbjct: 73  DVAVSAELIHSASLLHDDV--VDAGMFRRGRPTVNARWGNIVAVMSGDLILSTTLLRLAQ 130

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
              +L  +  S ++  +T     +    G M       +   ++  I + KTG+L  +  
Sbjct: 131 LDERLSRSALS-VVSEMTRAAITEVEARGVME------LPLPRLRYIAEGKTGSLFGWCG 183

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
            + A +A+      +R   FG +LG+ FQ+ADD+ D    D+ K
Sbjct: 184 HAAATLANQ-PEAAKRFDGFGRHLGVAFQIADDIRDVLGTDVGK 226


>gi|182434756|ref|YP_001822475.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326775273|ref|ZP_08234538.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
 gi|178463272|dbj|BAG17792.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326655606|gb|EGE40452.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
          Length = 367

 Score =  151 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 76  GGKAVRPALALLSAEAAGAPAEAGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A++++    T      R+   L+      + G       + +
Sbjct: 134 KVHGPAQAILVGDALFALAYDLLLELGTVEAG--RAARRLTTATRKLIDGQAQDISYEHR 191

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 192 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLL 250

Query: 229 DCEED 233
               D
Sbjct: 251 GIWGD 255


>gi|254458444|ref|ZP_05071869.1| polyprenyl synthetase [Campylobacterales bacterium GD 1]
 gi|207084752|gb|EDZ62039.1| polyprenyl synthetase [Campylobacterales bacterium GD 1]
          Length = 295

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +R++  ++ L+ +    +      RL +     L GGK++R+ L+ + A      H  A 
Sbjct: 2   QRVEREIERLIKE----IDYDEVTRLFNM----LSGGKRLRAKLILKIA----PEHEKAP 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A +E IH  SL+HDD+  +D    RRG  +V+      TA++ G+ L + AF  +  
Sbjct: 50  LLAAIVELIHGASLLHDDV--IDESITRRGVASVNATDGSKTAVMLGDILYSKAFTELVE 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
               +     ++ + S    +    M   +M D  +E  DE +   +  +KT  L+  A 
Sbjct: 108 FDRDI-----AKSIASSVTALSKGEMQDVKMADEFNE--DEEKYLDMLYLKTATLIEAAA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + A++      + ++   +G+NLG+ FQ+ DD+LD   D  
Sbjct: 161 YASALLVG---KDADKYGVYGKNLGLSFQIIDDILDITADSA 199


>gi|328713339|ref|XP_001947197.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
           [Acyrthosiphon pisum]
          Length = 338

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 16/227 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--- 68
           + +D  L D+       ++   N D L +   Y   G GK +R  +    A   N +   
Sbjct: 86  RLLDDDLRDVYTDITRELELNTNQDELRTIATYYFDGQGKALRPMVAILMAHAINYHMNN 145

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                    V    E IH  SLIHDD+  +D    RRGKP+V+  +      +AG+ +L 
Sbjct: 146 NGLDKKQREVAMIAEMIHSASLIHDDV--IDQSDFRRGKPSVNALWSHKKVAMAGDYILA 203

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
               +I+           SQ++  L     +      Q+   + E             KT
Sbjct: 204 VTSMMIARLNHNDVTITLSQIITDLVQGEFM------QLGSKETENERFAHYLTKTYRKT 257

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +L+  + ++ A++A A     +    +G N+G+ FQL DDLLD   
Sbjct: 258 ASLIANSVKAEAMLAGADDQLVDVSFEYGRNIGLAFQLVDDLLDFVS 304


>gi|282866077|ref|ZP_06275125.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282559116|gb|EFB64670.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 367

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 76  GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 133

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 134 KVHGPAQAILVGDALFALANEVLLELGTVEAG--RAARRLTSATRKLIDGQAQDISYEHR 191

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 192 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADVLEAYGYHLGLAFQAVDDLL 250

Query: 229 DCEED 233
               D
Sbjct: 251 GIWGD 255


>gi|257053117|ref|YP_003130950.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691880|gb|ACV12217.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
          Length = 346

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 31/258 (12%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           M   + S  Q   + I+     +      ++      +L  A RY L  GGK++R  ++ 
Sbjct: 1   MTDTVDS--QAVMEAIEWRRGQVNDAIPENLPVVEPKKLYEASRYLLDAGGKRLRPTILL 58

Query: 60  ECASLFN---------------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
             A                      +  +    +IE I  ++LIH     MD+  +RRG 
Sbjct: 59  LVAESIADVLPRSEPYREFPAAEGPIDMMSAAVSIEIIQSFTLIH--DDIMDDDDMRRGV 116

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P VH ++D  TAI+AG+ L   AFE +    +    ++R+   L+ T       +  GQ 
Sbjct: 117 PAVHREFDLSTAILAGDTLYAKAFENMLETGSTGDRSVRALSELATT----CTQICEGQS 172

Query: 165 LDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           +DI+   DE +       + ++KT  L   A     I+     +  + L  +G N+G  F
Sbjct: 173 MDIEFETDETVTTEDYLEMVELKTAVLYAAAASIPPILMG-EDDYVDPLYQYGLNIGRGF 231

Query: 222 QLADDLLDCE---EDLPK 236
           Q+ DDLLD     E L K
Sbjct: 232 QIQDDLLDLTTPSEKLGK 249


>gi|297823251|ref|XP_002879508.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325347|gb|EFH55767.1| hypothetical protein ARALYDRAFT_902550 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 422

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 38/260 (14%)

Query: 3   GGLPSKL-QENSKRIDTILD---------DLLLQTASHMQTQHNDRLLSAIRYAL---LG 49
           GG   +L  ++S  ++  LD          LL      M      +L SA  Y     + 
Sbjct: 64  GGFSHQLYHQSSSLVEEELDPFSLVADELSLLSNKLREMVVAEVPKLASAAEYFFKRGVQ 123

Query: 50  GKKIRSFLVTECASLFNVNHLTALR-----------------VGAAIECIHCYSLIHDDL 92
           GK+ RS ++   A+  N+    AL                  +    E IH  SL+HDD+
Sbjct: 124 GKQFRSTVLLLMATALNLRVPEALIGESTDIVSSELRVRQRGIAEITEMIHVASLLHDDV 183

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D+   RRG  ++++      +++AG+ LL+ A   +++ K      + +  +  L  
Sbjct: 184 --LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVT 241

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
              +      ++    ++             KT +L+  +C++ A++   +         
Sbjct: 242 GETM------EITSTTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFE 295

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +G+NLG+ FQL DD+LD   
Sbjct: 296 YGKNLGLAFQLIDDILDFTG 315


>gi|315282959|ref|ZP_07871252.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL
           S4-120]
 gi|313613406|gb|EFR87257.1| heptaprenyl diphosphate synthase component II [Listeria marthii FSL
           S4-120]
          Length = 324

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 18/236 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 9   LYANMQKDIDSVEKELKKALSGAAADTTSDAALHLLEA------GGKRIRPMFVCLSARL 62

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +         AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L
Sbjct: 63  AAEADFDAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFL 120

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              + E ++  K     ++ +  MLS        G +  Q+ D  +            K 
Sbjct: 121 FAKSLEYMTEIK-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKR 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           KT  L+  +C  G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 175 KTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 230


>gi|257472035|pdb|3IPI|A Chain A, Crystal Structure Of A Geranyltranstransferase From The
           Methanosarcina Mazei
          Length = 295

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 18/194 (9%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  ++   + + + ++  +L    A+E  H  SLIHDDL  +D G +RR  P+  
Sbjct: 41  GGKRIRPIILLLVSEICSGSYSRSLNAALAVEXXHSASLIHDDL--LDQGLVRRNLPSAP 98

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI- 167
            ++    A++ G+ L+  +   IS            + ++      G      G++LD+ 
Sbjct: 99  EKFGPSGALLCGDYLIAKSIAFIS---------PYGEKVIQDFGKAGXDX-AEGEVLDLK 148

Query: 168 -QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            +DE   E   F     KT +L   +   GA    A +   ER   FG  LG  +Q+ DD
Sbjct: 149 LEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDD 208

Query: 227 LLD----CEEDLPK 236
           +L+     E    K
Sbjct: 209 ILEFLEVVEGKESK 222


>gi|281354894|ref|ZP_06241388.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281317774|gb|EFB01794.1| Polyprenyl synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 355

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 35/252 (13%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV 67
           L++ +  ID +L D          T   D L  A+R Y + GGK++R  ++     L   
Sbjct: 5   LRQIAADIDRLLAD-----DEFPATVRPDYLRDAVRDYPVRGGKRLRPAMLIWSCGLLGG 59

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------- 110
           +   AL   AA+E  H ++L+HDD+  +D    RRG PT H++                 
Sbjct: 60  SESAALYPAAAVEVFHNWTLVHDDI--IDQDDTRRGAPTSHVKLAAELGGRFSLAADDAE 117

Query: 111 -YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 AI+AG+    +A +++            +  +      +    ++ G+ LD++ 
Sbjct: 118 RTGRDFAILAGDLQQGWANDLLLRSAEHGVPPEVTVALGRRFQKLANSDLISGEALDVEF 177

Query: 170 EFIDET-----QVFMIQKMKTGALMCFACESGAIM----AHASQNEKERLRCFGENLGII 220
              + T     +V  +  +KTGAL+ F  E+GA++    A A   +  +L  F    GI 
Sbjct: 178 SLRELTGLKSQEVRTMLGLKTGALLQFCTEAGAMIALNTADAEHPDVRKLSEFALAAGIA 237

Query: 221 FQLADDLLDCEE 232
           FQL DD L    
Sbjct: 238 FQLRDDYLGIFG 249


>gi|329568427|gb|EGG50234.1| polyprenyl synthetase [Enterococcus faecalis TX1467]
          Length = 326

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 17/222 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAA 78
           +L+ QT         + L++  R    GGK +R       A L +         L++ A+
Sbjct: 20  ELIEQTLHTRNEDIEEALVTLAR---SGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAAS 76

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +LIHDD+  +D+  +RRG  T+  QY +  A+  G+ L T  F +I+      
Sbjct: 77  LEILHMATLIHDDI--IDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNG- 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                S+ M      +    +   GQM    D  +           KT  L   +C  GA
Sbjct: 134 -----SEFMKINAQGMKRLLLGELGQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGA 188

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
              H+S+  +   +  G ++GI FQ+  ++LD   D    KK
Sbjct: 189 YFGHSSKEVQRLAKRIGRHIGIAFQVYANILDYTADTETLKK 230


>gi|310814826|ref|YP_003962790.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare
           Y25]
 gi|308753561|gb|ADO41490.1| geranylgeranyl pyrophosphate synthetase [Ketogulonicigenium vulgare
           Y25]
          Length = 290

 Score =  151 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 88/233 (37%), Positives = 135/233 (57%), Gaps = 15/233 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L +++   +  +  ++   L   A+         + SA+ YA  GGK +R FLV E A 
Sbjct: 3   SLSTRMAAAAADVQALIAAHLSPLAAASP------VASAMIYACTGGKGLRGFLVLESAR 56

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  + +  AL V AA+E +H YSL+HDD+P+MD+  +RRG+PTVH Q+DE TA++AG+ L
Sbjct: 57  LHGIAYADALPVAAAVEAVHAYSLVHDDMPAMDDDDLRRGRPTVHRQWDEATALLAGDAL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFM 179
            +  FE+I++    L D+ R  L+       G+ GM+GGQ  DI  E     +   Q+  
Sbjct: 117 QSLGFELIATAA--LPDSARVTLLAGFARAAGIHGMVGGQEADIAAETAARPLSLDQIIA 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +Q+ KTGAL+ ++  +GA+MA A       LR FG+ +G+ FQ+ DD+LD E 
Sbjct: 175 LQRGKTGALITWSASAGAVMAGAD---AAPLRAFGDAIGLAFQITDDILDVEG 224


>gi|223996715|ref|XP_002288031.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana
           CCMP1335]
 gi|220977147|gb|EED95474.1| geranylgeranyl diphosphate synthase [Thalassiosira pseudonana
           CCMP1335]
          Length = 320

 Score =  151 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 32/220 (14%)

Query: 37  DRLLSAIRYALLG------GKKIRSFLVTECASL------FNVNHLTA------LRVGAA 78
             L SA RY          GK++R  +V   +           N  TA       R+   
Sbjct: 7   PVLNSAARYFFNSEDGKGKGKQVRPVMVMLFSRAMMQMGTGEGNPSTAHALKSQRRLAEI 66

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL HDD+  +D    RRG+P  H  +    AI+AG+ LL  A   ++  +   
Sbjct: 67  TEMIHTASLFHDDV--IDEADTRRGQPAAHRAFGNKMAILAGDYLLARASICLARLR--- 121

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
             N+     +S      ++G +  Q+ D +    D          KT +LM  +C+S A+
Sbjct: 122 --NVDVVECMSTVIEHLVRGEVL-QIKDNRTGVPDMEGYLRKNFYKTASLMANSCKSAAL 178

Query: 199 MA------HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +         S    E    +G+++G+ FQL DD LD E 
Sbjct: 179 LGASANGSGISPVVVEAAYLYGKHIGVAFQLIDDALDFEG 218


>gi|84515006|ref|ZP_01002369.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
           SKA53]
 gi|84511165|gb|EAQ07619.1| Geranylgeranyl pyrophosphate synthetase [Loktanella vestfoldensis
           SKA53]
          Length = 293

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 12/220 (5%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           + RI+  +   + Q    +      +L +A+ YA+  GG +IR  ++   A     +   
Sbjct: 4   ADRIEATMTAAIAQGQGGVA---PPKLAAALNYAVTPGGARIRPTILMSVAMACGDDRPA 60

Query: 72  AL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
                 AA+E +HC SL+HDDLP  D+  +RRGKP +H  + E  A++AG+ L+   F +
Sbjct: 61  LTNAAAAALELVHCASLVHDDLPCFDDADMRRGKPALHRAFSEPLAVLAGDSLIIMGFHL 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++           + L +  T      G+  GQ      E   +  +    + KTGAL  
Sbjct: 121 LARAAGDAPARAITLLDILGTRTGMPFGICAGQGW----ESESQIDLSAYHQAKTGALFI 176

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            A + GA+ A     E E     G  +G  FQ+ADDL D 
Sbjct: 177 AATQMGAVAAG---QEAEPWAELGARIGEAFQVADDLRDA 213


>gi|288917197|ref|ZP_06411566.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f]
 gi|288351388|gb|EFC85596.1| Trans-hexaprenyltranstransferase [Frankia sp. EUN1f]
          Length = 338

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 16/198 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A R+ +  GGK+ R  +V   A   +      +    AIE  H  +L HDD+  MD 
Sbjct: 43  VTEASRHLVDAGGKRFRPMVVLLAAQFADPEAAGVVPAAVAIELTHLSTLYHDDV--MDE 100

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG  + + ++    AI+ G+ L   A EI +    +    I ++ + +        
Sbjct: 101 APLRRGAASANARWTNTVAILTGDFLFARASEITADLGPE-ATRILARTIAT-------- 151

Query: 158 GMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  GQ+ +       +        +   KT +L+  +   GA++A A +   + L  FG
Sbjct: 152 -LCEGQIRETVGPGPGQNQIEHYLRVITDKTASLIATSGRLGAMLAGADRVTADVLAAFG 210

Query: 215 ENLGIIFQLADDLLDCEE 232
           E  G+ FQL+DD++D   
Sbjct: 211 ERFGVAFQLSDDIIDLAS 228


>gi|330469543|ref|YP_004407286.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
 gi|328812514|gb|AEB46686.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
          Length = 355

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 24/253 (9%)

Query: 1   MNGGL-PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLV 58
           M   + P+   E   R D  L   L +            + + + R+ L GGK++R    
Sbjct: 1   MTATITPTDANELRARFDAELTAFLDRQDPDWPDGAPRGVFTTLHRFVLAGGKRLRPLFC 60

Query: 59  TECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------- 110
                       T +    AA+E  H ++LIHDD+  +D    RRG+P+VH         
Sbjct: 61  YWGWRAAGGPDSTPIVTAAAALELFHAFALIHDDI--LDGSDRRRGEPSVHRIFADLHTR 118

Query: 111 ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                    Y   TA++ G+    ++ ++        +   R   + SL     + G   
Sbjct: 119 SSWRGDPEAYGRNTALLCGDLCAAWSDQMFHECGLDAESVHRGYAVFSLMRTEVIAGEYL 178

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             +  +    +       + +MK     +    + GA +A AS    + L  FG+ LG  
Sbjct: 179 DLVSGVGGGSV--ASALTVIRMKAARYTVTRPLQIGATLAGASSELVDALAEFGDPLGDA 236

Query: 221 FQLADDLLDCEED 233
           FQL DD+L    D
Sbjct: 237 FQLRDDVLGVFGD 249


>gi|62959237|gb|AAY23726.1| farnesyl diphosphate synthase [Bacillus sp. JL-537]
          Length = 145

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP++    +RRGKPT H  Y E   I+AG+ LL+YAFE ++     +      Q+++
Sbjct: 1   HDDLPALQVDDLRRGKPTNHKVYGEDITILAGDALLSYAFEYVAR-TPDIPAERLLQVIV 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            L   +G +G++GGQ+ D++ E    +    +  I   KTGAL+     +GA++A A   
Sbjct: 60  RLGQAVGAEGLVGGQVADLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAVLAGAKPE 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           E + L  + +N+G+ FQ+ DD+LD E
Sbjct: 120 EVQLLSRYAQNIGLAFQIVDDILDVE 145


>gi|313231697|emb|CBY08810.1| unnamed protein product [Oikopleura dioica]
          Length = 344

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 14/213 (6%)

Query: 31  MQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYS 86
           +     D +     Y   G GK IR  +V   A         +    +V    E IH  S
Sbjct: 42  IPEDTTDEIYPMACYYFDGSGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGS 101

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+  +D    RRGK + + ++    A++AGN +++Y+ ++++S ++     I S++
Sbjct: 102 LVHDDV--IDKSEERRGKASANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRI 159

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +  L     + G L        +      Q      +KT +L+  + E+ A++     + 
Sbjct: 160 IEDL-----IYGELCQLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHV 214

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           ++    FG+ LGI FQ+ DD LD   D   L K
Sbjct: 215 QQAAFNFGKYLGIAFQIQDDRLDFLADSEQLGK 247


>gi|320536661|ref|ZP_08036676.1| polyprenyl synthetase [Treponema phagedenis F0421]
 gi|320146483|gb|EFW38084.1| polyprenyl synthetase [Treponema phagedenis F0421]
          Length = 399

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 21/247 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQ---------TQHNDRLLSAIRY-ALLGG 50
           M+     +LQ   + +   L + + Q   ++           +H   LL   +   L GG
Sbjct: 56  MSEEFAQRLQRIEEALYAALPEYIDQDWVNLSFSDIPEAVLPRHILPLLKPCKDLVLRGG 115

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K+ R  +    A L   +   A  +   IE IH  SLIHDD+   D+   RRG P +HIQ
Sbjct: 116 KRWRPLVAVLSAELACGDAYRAYALTPVIEFIHTASLIHDDIE--DSAETRRGAPAIHIQ 173

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           Y   TAI A + L  +A  II++  +  +     +L L  T N  L  +  GQ +DI   
Sbjct: 174 YGTDTAINAASWLYFHAMSIINAYPSSSE----LKLSLYRTVNKNLTNLHLGQAMDIDWH 229

Query: 171 FI-----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                     +   +  +KTG+L   A E G +   A +   E+     E++GI FQ+ D
Sbjct: 230 RNSNFIPSRAEYMAMIALKTGSLARLAAEIGFLAGGAGEEATEQYGKTMESIGIGFQILD 289

Query: 226 DLLDCEE 232
           D  +   
Sbjct: 290 DAKNITG 296


>gi|6682999|dbj|BAA88983.1| farnesylgeranyl diphosphate synthase [Aeropyrum pernix]
          Length = 318

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 9/204 (4%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDL 92
            DRL  A  + +  GGK++R  +    A +         A+ + A+IE  H +SLIHDD+
Sbjct: 15  PDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI 74

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             MD   +RRG PT H+ Y +  AI+AG+ L   AF++I+  +     + ++     +  
Sbjct: 75  --MDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLS 132

Query: 153 NIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              +Q +  GQ  D+  E    +D      + ++KTGAL+  A   GA+ A A    ++ 
Sbjct: 133 EAAIQ-ISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKM 191

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +   G N GI FQ+ DD+L    D
Sbjct: 192 MGEVGMNAGIAFQIRDDILGVIGD 215


>gi|159039961|ref|YP_001539214.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
 gi|157918796|gb|ABW00224.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
          Length = 344

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 18/237 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           ++ GLP  +    + ++  L D +              +  A R+ L  GGK+ R  LV 
Sbjct: 21  VDAGLPDSVLRVLEGVEAALRDDVASADPF--------VTEAARHLLDAGGKRFRPLLVA 72

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A   +      +     +E  H  +L HDD+  MD   +RRG P+ + ++    AI+ 
Sbjct: 73  LGAQFGDPTRAQVVPAAVVVELTHLATLYHDDV--MDEAPVRRGAPSANSRWTNSVAILV 130

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L   A +I +   T+      +  + + T    + G +  + +  +           
Sbjct: 131 GDYLFARAADISADLGTE------AVRLQARTFARLVHGQIA-ETVGPRPGVDPVAHHLH 183

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +   KTG+L+  +   G +   A       L  +GE +G+ FQL+DDLLD   +  +
Sbjct: 184 VIAEKTGSLIATSARFGGLFGGADPRYVAALAGYGETIGVAFQLSDDLLDIASESER 240


>gi|18645048|gb|AAL76349.1| geranyltranstransferase [uncultured marine proteobacterium]
          Length = 313

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 11/204 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLP 93
              L  A+ YA+  GG ++R  L    A    N     A    AAIE +HC SL+HDDLP
Sbjct: 46  PPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELLHCASLVHDDLP 105

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+   RRGKP++H  + +  A+++G+ L+  AF+ ++   + +   +R   + ++   
Sbjct: 106 CFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAA 165

Query: 154 --IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
              G  G+  GQ  + +       ++    + KTGAL   A  +GA  A       E  R
Sbjct: 166 GVGGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVPS---EPWR 218

Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
             G ++G  +Q+ADD+ D   D  
Sbjct: 219 ELGNSIGEAYQVADDIQDAIADTA 242


>gi|85703528|ref|ZP_01034632.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217]
 gi|85672456|gb|EAQ27313.1| Geranylgeranyl pyrophosphate synthetase [Roseovarius sp. 217]
          Length = 289

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 9/199 (4%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA-LRVGAAIECIHCYSLIHDD 91
           Q   RL  A+ YA   GG +IR  ++   A     +         AA+E +HC SL+HDD
Sbjct: 22  QTPARLADALDYATSPGGARIRPTILMSVAMACGDDRPDLSDAAAAALEIMHCASLVHDD 81

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           LP  D+  +RRGK +VH  Y E  A++ G+ L+  +FEI++           + ++    
Sbjct: 82  LPCFDDADLRRGKASVHRAYSEPLAVLTGDALIIMSFEILARVAHHDAGRATALILALAR 141

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            +    G+  GQ  + + +      +    + KTGAL   A + GAI A    +E E   
Sbjct: 142 RSGMPNGICAGQGWESEPK----VDLEAYHRSKTGALFIAATQMGAIAAG---HEPEPWY 194

Query: 212 CFGENLGIIFQLADDLLDC 230
             G  +G  FQ+ADDL D 
Sbjct: 195 ELGARIGAAFQVADDLRDA 213


>gi|313240927|emb|CBY33211.1| unnamed protein product [Oikopleura dioica]
          Length = 344

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 14/213 (6%)

Query: 31  MQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYS 86
           +     D +     Y   G GK IR  +V   A         +    +V    E IH  S
Sbjct: 42  IPEDTTDEIYPMACYYFDGSGKSIRPLIVGRIAEALGGCIETNEKLQKVAMIAEMIHTGS 101

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+HDD+  +D    RRGK + + ++    A++AGN +++Y+ ++++S ++     I S++
Sbjct: 102 LVHDDV--IDKSEERRGKASANSKWGVTKAVMAGNYIISYSSQLLASLESDEVTKIISRI 159

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +  L     + G L        +      Q      +KT +L+  + E+ A++     + 
Sbjct: 160 IEDL-----IYGELCQLESVNSNHEHRYKQYIKKTYLKTASLIANSAEAVAVLTDQPAHV 214

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           ++    FG+ LGI FQ+ DD LD   D   L K
Sbjct: 215 QQAAFNFGKYLGIAFQIQDDRLDFLADSEQLGK 247


>gi|325970901|ref|YP_004247092.1| trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy]
 gi|324026139|gb|ADY12898.1| Trans-hexaprenyltranstransferase [Spirochaeta sp. Buddy]
          Length = 328

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 9/188 (4%)

Query: 50  GKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  L+   ++L        A+RVG+ +E IH  SL+HDD+  +D+   RRGK TV 
Sbjct: 45  GKMLRPALILITSALGEQEVTEDAIRVGSILELIHLASLVHDDI--IDSAAKRRGKSTVF 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +     A++AG+ LL  A  + S  +  +   + S+ +  L  +         Q     
Sbjct: 103 AKVGAKQAVLAGDFLLAKALMLTSGKERGMDSRVVSRALSRLCESE------LEQDAGQG 156

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D FI           KT +L   +C +G  +  +    +      G  +G+ FQ+ DD+L
Sbjct: 157 DFFISHHTYLRRIAGKTASLFALSCYAGVALQESEPTRQMLCHRIGYCMGMAFQIQDDIL 216

Query: 229 DCEEDLPK 236
           D      K
Sbjct: 217 DYAGSSSK 224


>gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
           lycopersicum]
          Length = 206

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 8/145 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECA 62
                + E +  ++  L+       S +  +    +  ++RY+LL GGK+IR  L     
Sbjct: 68  EFKEYVLEKAVSVNKALE-------SAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAAC 120

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L      TA+    A+E IH  SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ 
Sbjct: 121 ELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDA 180

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLM 147
           LL  AFE I++    +  +   +++
Sbjct: 181 LLALAFEHIATHTKGVSSDRIVRVI 205


>gi|41409944|ref|NP_962780.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398777|gb|AAS06396.1| IdsA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 394

 Score =  151 bits (382), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 15/246 (6%)

Query: 1   MNGGLPSK---------LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGK 51
           M   LP           L++         D  +++     +   N      + Y L GGK
Sbjct: 1   MTSTLPDARPAVAALNPLEDYLAACKQACDREIVRLYGSGERGSNGLYQLILDYPLRGGK 60

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            +R  L          +    L   A +E  H   LIHDD+   D  + RRGKPT+HI Y
Sbjct: 61  ALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIE--DESWWRRGKPTLHIDY 118

Query: 112 DEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQMLDIQ 168
               A+  G+ +L+ + + +     +  L   +R  + + ++T        L    +   
Sbjct: 119 GVPVAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAVATMTRKTVDGQALELDWVHSN 178

Query: 169 DEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              +D+     + ++KT         ++G + A A+ +    L   G +LG  FQ+ DDL
Sbjct: 179 TWRLDDADYLEMVELKTSWYSFITPLQAGTVAAGATPDRMAPLESLGRHLGAAFQITDDL 238

Query: 228 LDCEED 233
           L+   D
Sbjct: 239 LNLRAD 244


>gi|255030470|ref|ZP_05302421.1| heptaprenyl diphosphate synthase component II (menaquinone
           biosynthesis) [Listeria monocytogenes LO28]
          Length = 292

 Score =  151 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 18/225 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALR 74
           ++  L   L   A+   +     LL A      GGK+IR   V   A L  N +      
Sbjct: 5   VEKELKKALSGAAADTTSAAALHLLEA------GGKRIRPMFVCLSARLAANADFNAVKN 58

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L   + E ++  
Sbjct: 59  ASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEI 116

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           K     ++ +  MLS        G +  Q+ D  +            K KT  L+  +C 
Sbjct: 117 K-----DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKRKTALLIAASCG 170

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            G +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 171 LGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 215


>gi|38234187|ref|NP_939954.1| putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200449|emb|CAE50137.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           diphtheriae]
          Length = 374

 Score =  151 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 36/260 (13%)

Query: 3   GGLPSKLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
             LPS   E    ++ +L +      +  + +    ++ +   + Y L GGK+IR     
Sbjct: 13  HSLPS-FSEVPAAVEEVLAEFFEGRKRKVAKIGVPVSNAVELLVEYVLGGGKRIRPTYAW 71

Query: 60  ECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----- 108
                         +    L    ++E I   +LIHDD+  +D    RRG PTVH     
Sbjct: 72  AGFVASGGLTNKTEDPGAVLTAIGSLELIQACALIHDDI--IDASDTRRGNPTVHRVAER 129

Query: 109 -----------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                       ++ E  AI+ G+  + +A ++  +         R+    S        
Sbjct: 130 THAESHRLGDSARFGESIAILVGDLAMVWADDMFHNSGLSDAAIRRA----SNAWRGMRT 185

Query: 158 GMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLRCF 213
            ++GGQ+LDI  E      + +   + + KT A  +      GA +A A       LR +
Sbjct: 186 EVIGGQLLDIYIESTGSESIELAETVNRFKTAAYTIERPLHIGAALAGADDQTVHCLRNY 245

Query: 214 GENLGIIFQLADDLLDCEED 233
           G ++G+ FQL DDLL    D
Sbjct: 246 GRDIGLAFQLRDDLLGVFGD 265


>gi|220905174|ref|YP_002480486.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869473|gb|ACL49808.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 321

 Score =  151 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 93/225 (41%), Gaps = 15/225 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L +++      I+  LD  +      ++      +  A      GGK++R  L    A L
Sbjct: 4   LKARIALELPAINRALDRAVEVLPEPVRPVTR-HIFEA------GGKRLRPLLTVLTARL 56

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      +   +E +H  +L+HDD+  +DN   RRGKP  H  Y+  + I+AG+ LL
Sbjct: 57  LGHDREDIHDLAVTLEMLHAATLLHDDV--LDNAMSRRGKPAAHTLYNVSSVILAGDALL 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A   ++           S+          L+    G++               I + K
Sbjct: 115 AEANAQVARRGDPRLTRCFSEATSRTAAGEILEIAAQGRV------DTSAGHYEEIVRGK 168

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T  L+  ACE GA+ A A +        +GENLG+ FQ+ DD LD
Sbjct: 169 TAWLIRAACEMGALAAEADEASVAAAAAYGENLGMAFQMVDDALD 213


>gi|258512777|ref|YP_003186211.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479503|gb|ACV59822.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 337

 Score =  151 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 10/192 (5%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K++R  L+    +    +   AL    AIE +H +SLIHDD+   D   +RRG+ ++   
Sbjct: 55  KRVRPLLLLTAHAALGGDWRAALPAAVAIEYVHGFSLIHDDIE--DRSPLRRGRASLWAV 112

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---I 167
           +    A+ AG+ L   AF ++             +   ++T       +  GQ LD    
Sbjct: 113 WGVDRALNAGDALFALAFRVMGDLADHFDARWVVETYQAMTDACIA--LSAGQELDLAFE 170

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           Q E +   Q   + ++KTGAL   A E  AI+A    + ++ LR  G  LG++FQ+ DD 
Sbjct: 171 QVENVSIEQYLAMAELKTGALFGAALEVAAILAGQPPSVRDDLRNAGRKLGVLFQILDDF 230

Query: 228 LDC---EEDLPK 236
            D    EEDL K
Sbjct: 231 HDLFGREEDLGK 242


>gi|288922395|ref|ZP_06416585.1| Polyprenyl synthetase [Frankia sp. EUN1f]
 gi|288346266|gb|EFC80605.1| Polyprenyl synthetase [Frankia sp. EUN1f]
          Length = 338

 Score =  151 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR + T  
Sbjct: 53  GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDTERRHRATAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + +     R+ ++L      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLLEVEGE--PGRRAAVIL----GAGVQDLVRGQAEDLL 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     ++  KTGAL+  +   GA++A A     + L  +G  LG  FQL D
Sbjct: 165 FESRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAPGEVVDGLAEYGSRLGTAFQLID 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|37912978|gb|AAR05310.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine
           gamma proteobacterium EB000-45B06]
 gi|40063209|gb|AAR38046.1| polyprenyl synthetase family protein [uncultured marine bacterium
           562]
          Length = 316

 Score =  151 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 11/188 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L    +S         L++ A IE +H  +L+HDD+  +D    RRG  +V+ 
Sbjct: 40  GKQLRARLSLIASSADRRQGKKRLKLAAIIELLHNATLVHDDV--VDESPTRRGVKSVNN 97

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +     ++ G+ + + AF ++           +    LS   N   +G L  Q+  I +
Sbjct: 98  IWTNAHGVLIGDYIYSKAFMLMVELGNS-----KILEELSNATNDISKGELI-QLDAIAN 151

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I  +++  I   KTG L   + + GA++ ++ ++    +    +NLGI+FQ+ DDLLD
Sbjct: 152 TGISLSELEDISYFKTGRLFEASAKCGALLCNSKKSYVNSISECAKNLGIVFQIKDDLLD 211

Query: 230 CEEDLPKK 237
               L K+
Sbjct: 212 Y---LGKE 216


>gi|332637102|ref|ZP_08415965.1| trans-hexaprenyltranstransferase, component II [Weissella cibaria
           KACC 11862]
          Length = 329

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 86/230 (37%), Gaps = 18/230 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            +  +LQ    RI+  LD                 L+    +   GGK +R         
Sbjct: 17  AIRKELQGVLDRIEANLD--------ANDADVEAALIDMFSH---GGKLLRPAFTILIGR 65

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
            F       L + A +E +H  SL+HDD+  +D+   RR   +V  ++ +  A   G+ L
Sbjct: 66  FFPAEREPLLNLAATVEMLHTASLVHDDI--IDDSPKRRHAESVQSRFGKDVAAYTGDYL 123

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
               F  ++       ++I    M +      L G L  Q  +     +           
Sbjct: 124 FAVTFRTLADNT----NDINVVRMATRYLERILSGELT-QRTNHYKRDMTIANYEDQIAG 178

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT AL   A   G   +HA ++  +    F  N+G+ FQ+ DDLLD   D
Sbjct: 179 KTAALFVLAANLGIAASHAPKDFADLATDFAYNVGMAFQILDDLLDYSAD 228


>gi|114705279|ref|ZP_01438187.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506]
 gi|114540064|gb|EAU43184.1| Polyprenyl synthetase [Fulvimarina pelagi HTCC2506]
          Length = 338

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 12/192 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GGK++R  L    A           +++ A++E +H  +L+HDD+  +D   +RRG+ T 
Sbjct: 56  GGKRLRPMLTIASALAHGYEEGDAHVKLAASVEFMHTATLLHDDV--VDESDLRRGRRTA 113

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              +    +++ G+ LL  AF+++    +     + +  +LS    +  +G +  Q+   
Sbjct: 114 RTIWGNQASVLVGDYLLGQAFKMMVDVGS-----MAALAILSDASAVIAEGEVW-QLAAA 167

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +     E     +   KT AL   A E G ++A  S  E+E +R +G +LGI FQL DD+
Sbjct: 168 KRMTTSEADYLSVVDAKTAALFAAAAEVGPVIAGKSMREREAMRRYGRSLGISFQLIDDV 227

Query: 228 LDCEE---DLPK 236
           LD      DL K
Sbjct: 228 LDYGGVATDLGK 239


>gi|332526065|ref|ZP_08402203.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2]
 gi|332109908|gb|EGJ10536.1| geranyltranstransferase [Rubrivivax benzoatilyticus JA2]
          Length = 306

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 14/224 (6%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHL 70
             RI+  L+      A+        +L +AIR+A+  GG +IR  L    A    + +  
Sbjct: 4   QTRIEQALE---AAVAAQEGAGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPE 60

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A    +AIE IHC SL+HDDLP  D+   RRG+P+VH  Y E  A++AG+ L+  AF+ 
Sbjct: 61  LADAAASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQT 120

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           + +   +  + + ++++ ++   +G   G++ GQ  + +        +   Q+ KTGAL 
Sbjct: 121 LGAAGARHPERM-ARVLQTVARGVGTPLGIIAGQAWECE----PRVALSDYQRAKTGALF 175

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A  +GA  +         L   G+ LG  +Q+ADD+ D   D
Sbjct: 176 AAATAAGAQASGGDGETWRAL---GDWLGEAYQVADDVRDALAD 216


>gi|237742642|ref|ZP_04573123.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
 gi|229430290|gb|EEO40502.1| farnesyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
          Length = 326

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 19/235 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN-- 66
           L+E  +R+   +   L+   S  ++Q    L   +  +   GK +RS L+  CA L +  
Sbjct: 6   LKEWIERVKYYI--HLIADYSIKESQVGAVLDDVLNLS---GKMLRSKLLLLCAFLGSNW 60

Query: 67  -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             N     ++ A +E  H  SLIHDD+  +D+   RRGK ++  +Y +  A+ AG+ L+ 
Sbjct: 61  KDNKEKICKLAAMVELTHLASLIHDDI--VDDSPYRRGKVSIQGKYGKDAAVFAGDFLIA 118

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F   +        +I S+ +  +      Q +   Q      + I E + F   + KT
Sbjct: 119 RIFYYGAMENLNETVSILSKTVEYMCIGEIEQDLCRYQ------KDISEKKYFENIERKT 172

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPKK 237
            AL   A   GA     S+   ++L+ F +NLG++FQL DD+LD      +L K+
Sbjct: 173 AALFQAASYIGAKETGCSEEIIQKLKLFVKNLGLMFQLKDDILDFTSNSKELGKE 227


>gi|328479791|gb|EGF48907.1| Geranyltranstransferase [Lactobacillus rhamnosus MTCC 5462]
          Length = 252

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 10/200 (5%)

Query: 43  IRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + Y++  GGK++R  L+    ++++     AL   AA+E +H YSLIHDDLP+MDN  +R
Sbjct: 1   MAYSVDAGGKRLRPLLLLSVVAMYDGVVAEALPAAAALEFVHTYSLIHDDLPAMDNDDLR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG+PT H Q+ E  AI+AG+ LLT AF I+S    +    +    +  L    G  GM+ 
Sbjct: 61  RGQPTNHKQFGEALAILAGDALLTDAFAILSQHYPEKGAAL----VQILAEAAGSSGMVA 116

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           GQ+LD+  E    D   +  + + KTGAL+      G++     + ++  L  F    G+
Sbjct: 117 GQVLDMDGEQTQYDLATLKQMHQAKTGALIQAGVAMGSLFVAIPEADQAALADFAAAFGL 176

Query: 220 IFQLADDLLDC---EEDLPK 236
            FQ+ DD+ D      +L K
Sbjct: 177 GFQIKDDINDVTKTTAELGK 196


>gi|302791545|ref|XP_002977539.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii]
 gi|300154909|gb|EFJ21543.1| hypothetical protein SELMODRAFT_271252 [Selaginella moellendorffii]
          Length = 402

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 25/226 (11%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLF--------------N 66
           L +    M      +L SA  Y   LG  GK+ R  ++   +S                +
Sbjct: 78  LGRRLRDMVAAEVPKLASAAEYFFKLGVEGKRFRPMVLLLMSSSLTMVLPSAAAAAATSD 137

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             +    ++    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL  
Sbjct: 138 EKNWRHHKLAEITEMIHVASLLHDDV--LDHADTRRGIASLNFIMGNKLAVLAGDFLLAR 195

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   +S+ +           ++S      + G +    +D + +             KT 
Sbjct: 196 AAFSLSTLQNDE-----VVGLMSKVLEHLVAGEVMQWTVDAE-KSSSMDYYLQKTFYKTA 249

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  +C+  AI+A   +        +G +LG+ +QL DDLLD   
Sbjct: 250 SLIANSCKCIAILAGHPKEVAALAFDYGRHLGLAYQLVDDLLDFTG 295


>gi|239945641|ref|ZP_04697578.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 15998]
 gi|239992111|ref|ZP_04712775.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 11379]
          Length = 356

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 65  GGKAVRPALALLSAEAAGAPAEAGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 122

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A++++    T      R+   L+      + G       + +
Sbjct: 123 KVHGPAQAILVGDALFALAYDLLLELGTVEAG--RAARRLTTATRKLIDGQAQDISYEHR 180

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 181 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADTLEAYGYHLGLAFQAVDDLL 239

Query: 229 DCEED 233
               D
Sbjct: 240 GIWGD 244


>gi|288942267|ref|YP_003444507.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
 gi|288897639|gb|ADC63475.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
          Length = 289

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 14/225 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-N 68
           + + RI+  L   +   A         RL  A+R+A+  GG ++R  L    A+     +
Sbjct: 2   DATTRIEQALAAAIDTVAV---PGCPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +  A   G AIE +HC SL+HDDLP  D+  +RRG P+VH  + E  A++AG+ L+  AF
Sbjct: 59  YAAADAAGVAIELLHCASLVHDDLPCFDDSPLRRGVPSVHRAFGEPLAVLAGDALIILAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           E ++           + L+L+++ ++G+  G+  GQ  + +     +  V    + KTG+
Sbjct: 119 EHLARVLAD-SPERLAPLLLTISRSVGMPHGITAGQAWECE----PQVTVEEYHRAKTGS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A  +    A  +  + E     G+ +G  +Q+ADDL D   
Sbjct: 174 LFTAATAA---GALVAGADAEAWSVVGDKIGEAYQVADDLRDVAA 215


>gi|290968407|ref|ZP_06559947.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781594|gb|EFD94182.1| polyprenyl synthetase [Megasphaera genomosp. type_1 str. 28L]
          Length = 337

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 14/193 (7%)

Query: 50  GKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK IR  LV    S             +  A IE  H  SLIHDD+  +D   +RRGKP+
Sbjct: 55  GKMIRPRLVIMAGSFGKRYAEAEERLYKAAALIEMTHSASLIHDDI--VDEAPLRRGKPS 112

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           V  +Y +  A+ AG+ L++     +          ++S ++L+        G +  Q L 
Sbjct: 113 VQRRYGKSAAVYAGDFLMSRITYHLMQEGL-----MQSGMVLAKAVEAMCAGEIT-QALC 166

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                +   +       KT AL   AC  GA+ +   ++   RL   GE LG +FQ+ DD
Sbjct: 167 RYRADVTLAEYLQNIYGKTVALFRAACRMGALESGCDESLIRRLENVGEALGYMFQMRDD 226

Query: 227 LLD---CEEDLPK 236
           LLD     E + K
Sbjct: 227 LLDFLPVTEQIGK 239


>gi|226361079|ref|YP_002778857.1| polyprenyl diphosphate synthase [Rhodococcus opacus B4]
 gi|226239564|dbj|BAH49912.1| putative polyprenyl diphosphate synthase [Rhodococcus opacus B4]
          Length = 351

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 98/222 (44%), Gaps = 17/222 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + ++E  K+++ +L        S +    +    +A+  A  GGK+ R       
Sbjct: 31  DPQLAATVREGLKQVEELL-------VSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLT 83

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L    +  + +     +E +H  +L HDD+  MD   +RRG P+ + ++    AI+AG
Sbjct: 84  AQLGPKASDPSVVTAATVVELVHLATLYHDDV--MDEASMRRGAPSANARWGNSVAILAG 141

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L  +A  ++S+   +      +  +++ T    + G +  + + ++ E         +
Sbjct: 142 DYLFAHASRLVSTLGPE------AVRIIAETFAELVTGQMR-ETIGLRGEQDPVEHYLKV 194

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              KTG+L+  +   G   + A  +  +RL   G+ +G  FQ
Sbjct: 195 VWEKTGSLIAASGRFGGTFSGADADHVKRLERLGDAVGTAFQ 236


>gi|170749228|ref|YP_001755488.1| polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170655750|gb|ACB24805.1| Polyprenyl synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 289

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 15/231 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           E+ +RI+  LD  +    +         L  A+RYA+  GG +IR  L    A     + 
Sbjct: 2   ESGQRIEMALDRAVAHAEA---PGAPPLLAEALRYAVFPGGHRIRPRLCLSVARACGDDD 58

Query: 70  LT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              ++   AAIE +HC SL+HDDLP  D+  +RR KP+VH+ + E  A++ G+ L+  AF
Sbjct: 59  PAGSVAAAAAIEFLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIAVLTGDALIVLAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E ++    +    +   + L         G+  GQ  + +   I  +        KTGAL
Sbjct: 119 ETLARSVGRHPARLGRLVGLLGRAAGSPSGIAAGQAWESEAH-ISLSDYQQA---KTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              A  +    A A+  E E  R  GE LG  +Q+ADDL D    +E++ K
Sbjct: 175 FAAATVA---GAAAAGAEPEPWRRLGECLGEAYQVADDLRDVACRQEEIGK 222


>gi|57167586|ref|ZP_00366726.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228]
 gi|57020708|gb|EAL57372.1| octaprenyl-diphosphate synthase (ispB) [Campylobacter coli RM2228]
          Length = 275

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 22/189 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GKK+RS L+   A      +  + ++ AAIE IH  SL+HDD+  +D   +RRG  +V+ 
Sbjct: 8   GKKLRSKLLLAIA----GENANSYKICAAIELIHLASLLHDDI--IDESKLRRGAKSVNA 61

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ- 168
           ++    A++ G+ L + AF  +S         I          +  +  +  G+++D++ 
Sbjct: 62  EFGTKNALMLGDILYSKAFYELSQLDACFASII----------SDAVVKLAVGELMDVEF 111

Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                 D+ +   +   KT  L+  +   GAI+A+  +   +    +G+NLG+ FQ+ DD
Sbjct: 112 SKSFNADKDKYLKMIYNKTAVLIEASARCGAILANLDE---KAFGEYGKNLGLAFQMIDD 168

Query: 227 LLDCEEDLP 235
           +LD + D  
Sbjct: 169 ILDIKGDEK 177


>gi|326444408|ref|ZP_08219142.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 355

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 64  GGKAVRPALALLSAEAAGAPPEIGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 121

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T      R+   L+      + G       + +
Sbjct: 122 KVHGPAQAILVGDALFALANEILLELDTVEAG--RATRRLTTATLRLIDGQAQDISYEHR 179

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 180 -ERVTVEECLEMEGNKTGALLACAVSIGAVLGGADDRTADALEAYGYHLGLAFQAVDDLL 238

Query: 229 DCEED 233
               D
Sbjct: 239 GIWGD 243


>gi|291294791|ref|YP_003506189.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279]
 gi|290469750|gb|ADD27169.1| Dimethylallyltranstransferase [Meiothermus ruber DSM 1279]
          Length = 319

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 16/229 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
                L    +  +  L +++      ++    D +         GGK++R  LV   ++
Sbjct: 5   DFTPDLPTLLEAFELRLREVVRSEVEFVRLIEEDLV-------TAGGKRVRPRLVFLASN 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   A+ +  A+E +H  SL+HDDL  +D+   RRGK     +Y    ++++G+ L
Sbjct: 58  ALGGVP-YAMELALAVELLHSASLLHDDL--VDDAETRRGKEAAFRKYGNAVSVLSGDYL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L+    +++         + ++    L+    LQ  +                   I   
Sbjct: 115 LSRLMALLAQTGRMELVAMFAETARQLSEAEVLQFQVAAL------HDYSLENYERIIDG 168

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT ++M  ACE  A++  A   E+E L  FG   G  FQ+ DD LD   
Sbjct: 169 KTASVMRVACEGAAVLGDAPPAEREALARFGSFYGQAFQMRDDYLDLMG 217


>gi|322367991|ref|ZP_08042560.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus
           DX253]
 gi|320552007|gb|EFW93652.1| farnesyl-pyrrophosphate synthase [Haladaptatus paucihalophilus
           DX253]
          Length = 276

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 15/216 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T+++D L +    ++ +     L+    AL GGK++R  +          +   A+  G 
Sbjct: 5   TLVEDRLEEVVERVEPRELSEQLA--HTALSGGKRVRPTVAMLACEAAGGDAENAVDFGV 62

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            IE +H  SL+ DD+  +D   +RRG  +   +Y    AIIA +G+L  AFE+ SS    
Sbjct: 63  GIELVHDASLVVDDI--IDRSDVRRGTESAWAEYGYGRAIIASDGMLGEAFELFSSDP-- 118

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
                  + M  +  ++   GM  G+  ++     ++++   + + KTGAL   A E GA
Sbjct: 119 -------RAMEVVAESMIELGM--GEASELVATPSNQSEYMELARRKTGALFRAAAELGA 169

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I A A     +    + E +GI FQ+ DD+LD   D
Sbjct: 170 IAADADPETIDAFGEYAERVGIAFQIRDDVLDATAD 205


>gi|239582554|dbj|BAB61886.2| farnesyl diphosphate synthase [Rhodopseudomonas palustris]
          Length = 147

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/147 (44%), Positives = 93/147 (63%), Gaps = 4/147 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +RRG+PT+H  YD+ TAI+AG+ LLT+AF+I++  +      +R  L  
Sbjct: 1   HDDLPGMDNSDLRRGRPTLHKAYDDATAILAGDALLTFAFDIVTRDEVHKDPTVRLLLTR 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            L    GL GM+GGQMLD+  E      +   V  +Q+MKTGAL+ + C +GAI+  A+ 
Sbjct: 61  VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQANA 120

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
           ++   L  +G  LG  FQ+ADD+LB E
Sbjct: 121 DQYRALDDYGRALGEAFQIADDILBVE 147


>gi|297570179|ref|YP_003691523.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296926094|gb|ADH86904.1| Trans-hexaprenyltranstransferase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 336

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 26/242 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L  +L   +++I+ ++ D        +    N RL + + +ALL GGK+IR  L    A 
Sbjct: 6   LKQQLAAAAEQINQVIKD-------DLAAVTNPRLAAILEHALLAGGKRIRPLLTLLAAQ 58

Query: 64  LFNVNHLTALR----------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           L   +  T             +  + E +H  SL+HDD+  +D+  +RRG+ TV+ ++D 
Sbjct: 59  LVQGHKGTENPQAGTATPWQQLAISFEYLHTASLLHDDV--IDHAALRRGRETVNTRWDN 116

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
            +AI+AG+ L   A  +           +      ++  +  +Q                
Sbjct: 117 GSAILAGDFLHARALLLAGRAGGVPCLELIGTATQAMVDSEFIQQEAAASRDWR------ 170

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           E   F +   KT AL+  ACE+G + A  +  ++  L  +G NLG  FQ+ DDLLD   +
Sbjct: 171 EETYFAVLDGKTAALIAAACEAGGVAAGGNPAQRRALHTYGGNLGRAFQIIDDLLDYLGE 230

Query: 234 LP 235
             
Sbjct: 231 PG 232


>gi|40062934|gb|AAR37805.1| polyprenyl synthetase [uncultured marine bacterium 442]
          Length = 292

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 11/204 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLP 93
              L  A+ YA+  GG ++R  L    A    N     A    AAIE +HC SL+HDDLP
Sbjct: 25  PPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELLHCASLVHDDLP 84

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+   RRGKP++H  + +  A+++G+ L+  AF+ ++   + +   +R   + ++   
Sbjct: 85  CFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAA 144

Query: 154 --IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
              G  G+  GQ  + +       ++    + KTGAL   A  +GA  A       E  R
Sbjct: 145 GVGGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVPS---EPWR 197

Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
             G ++G  +Q+ADD+ D   D  
Sbjct: 198 ELGNSIGEAYQVADDIQDAIADTA 221


>gi|50549037|ref|XP_501989.1| YALI0C18755p [Yarrowia lipolytica]
 gi|60389562|sp|Q6CBH3|COQ1_YARLI RecName: Full=Probable hexaprenyl pyrophosphate synthase,
           mitochondrial; Short=HPS; Flags: Precursor
 gi|49647856|emb|CAG82309.1| YALI0C18755p [Yarrowia lipolytica]
          Length = 452

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 20/176 (11%)

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N       R+   +E IH  SL+HDD+  +DN   RRG PT ++ +    AI+AG+ LL 
Sbjct: 187 NGILPKQRRLAEIVEMIHTASLLHDDV--IDNSATRRGSPTGNVAFGNKMAILAGDFLLG 244

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------F 178
            A   I+  +      + S  +           ++ G+ + +++  +D +++       +
Sbjct: 245 RASVAIARLRNAEVIELLSTTIA---------NLVEGEFMQLKNTIVDNSEIANKATFEY 295

Query: 179 MIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I K  +KT +LM  +C + A+++ A     +    FG+NLG+ FQ+ DD+LD  E
Sbjct: 296 YIHKTYLKTASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSE 351


>gi|269926570|ref|YP_003323193.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790230|gb|ACZ42371.1| Polyprenyl synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 345

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 29/247 (11%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQT------QHNDRLLSAIRYAL------------LGG 50
           + E  K I+  LD  L    ++++       +      +AI+Y +              G
Sbjct: 1   MNEIDKDIEQ-LDKYLQDVRNYIRQFLTDNGREPREFYNAIQYPVGLVDEQMVPGDSQSG 59

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K +R  L              A+   AAIE +H ++L+HDD+   D+   RR +P++   
Sbjct: 60  KMLRPRLCILSCMAAGGEVRKAIPAAAAIEILHNFTLVHDDIE--DHSPSRRHRPSLWKL 117

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT--HNIGLQGMLGGQMLDIQ 168
                A+ AG+G+   +  ++ S    L+  + +Q +L+     +     +  GQ +D+ 
Sbjct: 118 IGVPLALNAGDGMFVISHMVLQSM---LELGVPAQTVLAAIDKFDQAALSVCEGQHMDLM 174

Query: 169 DEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  +E    +   +   KTGALM  +C  GA++A   +   E+ R FGENLG+ +Q+ D
Sbjct: 175 FEAREEVSLQEYLAMISRKTGALMGLSCYLGALVAGKDECVLEQYRHFGENLGLAYQIRD 234

Query: 226 DLLDCEE 232
           D+    E
Sbjct: 235 DIAGIWE 241


>gi|302898878|ref|XP_003047935.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728867|gb|EEU42222.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 443

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 185 RLAEITELIHTASLLHDDV--IDHSISRRGSPSANLEFGNKMAVLAGDFLLGRASVALAR 242

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    E           +KT +L+ 
Sbjct: 243 LRNPEVVELLATVIANLVE--GEFMQLKNTERDERNPKWSEETVSYYLQKTYLKTASLIS 300

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            +C + A++ ++     +    +G NLG+ FQL DDLLD  +   DL K
Sbjct: 301 KSCRAAALLGNSDPVTVDAAYSYGRNLGLAFQLVDDLLDYTQSGTDLGK 349


>gi|84500607|ref|ZP_00998856.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597]
 gi|84391560|gb|EAQ03892.1| farnesyl diphosphate synthase [Oceanicola batsensis HTCC2597]
          Length = 286

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 9/204 (4%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
              +  A+R+A  GGK++R+FLV E A+L  V    AL   AAIE +H YSL+HDDLP+M
Sbjct: 25  PGEVGEAMRHATSGGKRLRAFLVCEGAALHGVAPGPALDAAAAIEAMHAYSLVHDDLPAM 84

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG+PTVH++++E TAI+ G+ L + AF+++S     L  +    L   +    G
Sbjct: 85  DDDDLRRGQPTVHVKWNEATAILVGDALQSLAFDLLSHAA--LPADRVVTLTAGMARAAG 142

Query: 156 LQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
             GM+ GQ LDI  E     +   Q+  +Q  KTGAL+ ++ ++G IMA A       + 
Sbjct: 143 GMGMVHGQALDIAAETAPEPLSLPQITELQARKTGALIEWSAQAGPIMADADPG---PMG 199

Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
            +   LG+ FQ+ADD+LD E D  
Sbjct: 200 AYARALGLAFQIADDILDVEGDEA 223


>gi|108757727|ref|YP_631865.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622]
 gi|108461607|gb|ABF86792.1| polyprenyl synthase family protein [Myxococcus xanthus DK 1622]
          Length = 332

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 14/236 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-G-KKIRSFLVTEC 61
            L  +L +    ++  L   L+   +    +  D L+ A R+  LG G K+ R  L    
Sbjct: 2   DLARELTDFLGAVEQRLGSTLVDGDAGPDVKG-DTLMEAARHLCLGSGSKRARPMLARLF 60

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                V     + V  A E IH  SL+HDD+  +D G  RRG+PTV+ ++  + A+++G+
Sbjct: 61  GGAVGVPAERLVDVAVAAELIHSASLLHDDV--VDAGMFRRGRPTVNARWGNIVAVMSGD 118

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            +L+     +S    +L  +  S ++  +T     +    G      D  +   ++  I 
Sbjct: 119 LILSTGLFQLSQLDARLTRSALS-VVSEMTRAAIAEVEARG------DLDLPLNRLRFIA 171

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
           + KTG+L  +   + A +A       ER   FG +LG+ FQ+ADD+ D    D+ K
Sbjct: 172 EGKTGSLFGWCGNAAATLAEH-PEAVERFDGFGRHLGVAFQIADDIRDILGTDVGK 226


>gi|302786728|ref|XP_002975135.1| geranyl diphosphate synthase [Selaginella moellendorffii]
 gi|300157294|gb|EFJ23920.1| geranyl diphosphate synthase [Selaginella moellendorffii]
          Length = 342

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 23/224 (10%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVT------------ECASLFNVN 68
           L +    M      +L SA  Y   LG  GK+ R  ++               A+  +  
Sbjct: 4   LGRRLRDMVAAEVPKLASAAEYFFKLGVEGKRFRPMVLLLMSSSLTMVLPSAAAATSDEK 63

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +    ++    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL  A 
Sbjct: 64  NWRHHKLAEITEMIHVASLLHDDV--LDHADTRRGIASLNFIMGNKLAVLAGDFLLARAA 121

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             +S+ +      + S+++  L     +      Q     ++             KT +L
Sbjct: 122 FSLSTLQNDEVVGLMSKVLEHLVAGEVM------QWTVDAEKSSSMDYYLQKTFYKTASL 175

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +C+  AI+A   +        +G +LG+ +QL DDLLD   
Sbjct: 176 IANSCKCIAILAGHPKEVAALAFDYGRHLGLAYQLVDDLLDFTG 219


>gi|296110654|ref|YP_003621035.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154]
 gi|295832185|gb|ADG40066.1| geranyltranstransferase [Leuconostoc kimchii IMSNU 11154]
          Length = 306

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 28/239 (11%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L     E   +++  L+D L +        ++      ++YA+L GGK++R  L     +
Sbjct: 4   LAEFQSEWIPKLNQQLEDDLTRA------TNDSEFSDMMKYAVLNGGKRLRPMLSLAAMA 57

Query: 64  LFNVNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F      + L+   A+E +H YSL+HDDLP+MDN  +RRGKP+VH Q+ E  AI+ G+ 
Sbjct: 58  CFGQKITPSFLKAATAVEWVHSYSLVHDDLPAMDNDLVRRGKPSVHAQFGEAEAILVGDA 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLM------LSLTHNIGLQGMLGGQMLDIQDEF----I 172
           LLT AF ++++    + ++     +        L+   G  GM+ GQ+ D+ +      I
Sbjct: 118 LLTGAFHVLATANDSVVEDEMISAVELLKLSQILSVQSGSLGMVIGQVHDMYNHGKQSKI 177

Query: 173 DETQVF-MIQKMKTGALMCFACESGAIMAHASQNEK---------ERLRCFGENLGIIF 221
           DET +   +   KTGAL+ F+  +G  +++    ++           +  FG + GI F
Sbjct: 178 DETWLIDEVYMPKTGALLGFSALAGTRLSNQQDIDQIGQDRFDTNLAMLTFGYDFGIAF 236


>gi|302537967|ref|ZP_07290309.1| polyprenyl diphosphate synthase [Streptomyces sp. C]
 gi|302446862|gb|EFL18678.1| polyprenyl diphosphate synthase [Streptomyces sp. C]
          Length = 326

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 35  GGKAVRPALALLSAEAAGAAAEVGIPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 92

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A E++    T      R+   L+      + G       + +
Sbjct: 93  KVHGPALAILVGDALFALANEVLLELGTVEAG--RATRRLTTASRKLIDGQAQDISYEHR 150

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  +   GA++  A     ++L  +G +LG+ FQ  DDLL
Sbjct: 151 -ERVSVQECLEMEGNKTGALLACSVSIGAVLGGADDRTADKLEEYGYHLGLAFQAVDDLL 209

Query: 229 DCEED 233
               D
Sbjct: 210 GIWGD 214


>gi|282852728|ref|ZP_06262070.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
 gi|282556470|gb|EFB62090.1| polyprenyl synthetase [Lactobacillus gasseri 224-1]
          Length = 324

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 18/190 (9%)

Query: 49  GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GK +R   V      F  +    H    ++  +IE +H  +LIHDD+  +D   +R G+
Sbjct: 54  PGKMLRPACVMLFG-AFGPDADQKHDELQKIATSIETLHNATLIHDDI--IDESSMRHGR 110

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P++  +Y +  A+ AG+ L+  +  ++S     L   I             +Q +L G+ 
Sbjct: 111 PSIQTKYGKHIAVYAGDYLVALSLTLLSENAQSLHSVI--------ADGKTMQNILVGET 162

Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               + +   I E +     K KTG L   AC  GA  +     +  + + FGE LG  F
Sbjct: 163 EQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAYESGTKVTKALKAKKFGEYLGQAF 222

Query: 222 QLADDLLDCE 231
           QL DD+LD  
Sbjct: 223 QLRDDILDYT 232


>gi|114778283|ref|ZP_01453142.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1]
 gi|114551385|gb|EAU53941.1| octaprenyl-diphosphate synthase [Mariprofundus ferrooxydans PV-1]
          Length = 325

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 13/218 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L+ T  H   Q +  ++ AI + ++  GGK++R  L    A LF       + +   +E 
Sbjct: 18  LVDTCIHENLQSDIMMIPAIGHYIVNSGGKRLRPLLTLLTARLFGYQGKRHVPLSVVVEF 77

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  SL+HDD+  +D+   RRG P+ +  +    +++ G+ L + AF+++ S       +
Sbjct: 78  IHTASLLHDDV--VDSSDQRRGAPSANGVWGNQASVLVGDYLFSRAFQMMVSDG-----D 130

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +    ++S   N   +G +  Q+       + E +   + + KT  L   A E GA +A 
Sbjct: 131 MVMLKLMSDVTNALAEGEVL-QLSRTFHLEMTEAECLEVIERKTAVLFKAATEVGAHVAG 189

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            S      +  +G  LG+ FQL DD LD     ED  K
Sbjct: 190 QSAQTIAAMAEYGMCLGVAFQLMDDALDYLAEAEDAGK 227


>gi|317509118|ref|ZP_07966745.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316252589|gb|EFV12032.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 338

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 20/239 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +      ++ +  R+++I+    +++         + L  A      GGK+ R       
Sbjct: 14  SDAFTESVRASLDRVESIII-AEVESGIEAMAAVAEHLAKA------GGKRFRPMFTVVA 66

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             L  +          +A+E IH  +L HDD+  MD   +RRG P+ ++Q+    AI+AG
Sbjct: 67  GQLGADERRGDVEIAASALELIHLATLYHDDV--MDEATMRRGVPSANVQWGNQIAILAG 124

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   A  +I+   ++      +  +++ T    + G L  ++L  Q E         +
Sbjct: 125 DYLFARACGLIAKLGSE------ATSIVAQTFGELVTGQL-QEVLGAQGERDKIEHYLTV 177

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              KT +L+        +   A +  +++L   GE +G+ FQ+ADD++D      D  K
Sbjct: 178 IFGKTASLLGACGRLAGLAIRADRQVQDQLAVIGELVGMAFQIADDIIDIGSGSADSGK 236


>gi|297624850|ref|YP_003706284.1| polyprenyl synthetase [Truepera radiovictrix DSM 17093]
 gi|297166030|gb|ADI15741.1| Polyprenyl synthetase [Truepera radiovictrix DSM 17093]
          Length = 315

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 16/220 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRY--------ALLGGKKIRSFLVTECASLFNVNHLTAL 73
           DL+ Q  S  + +  + L S + +           GGK++R  L      L       A+
Sbjct: 3   DLIQQDLSDFEARLTEELYSPVEFIGAIGEDLVHAGGKRLRPSLAFLTGRLLGAEREAAM 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           RV  A+E +H  SL+HDDL  +D+   RRG      +Y  V ++++G+ +L     I++ 
Sbjct: 63  RVALAVELLHSASLLHDDL--IDDASTRRGVVAAFRRYGNVVSVMSGDFMLARVLGILAE 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   + S+    +     L      Q      E         I + KT  L+  A 
Sbjct: 121 ADAPSFTRLMSETAARICEGEVL------QFQMASLETYSLEHYNTIIEGKTAVLLAAAT 174

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           E  A++A A+   +  LR FG + G  FQ+ DDLLD   D
Sbjct: 175 EGVALLAGAAPGARRALRAFGLHYGRAFQMRDDLLDLMSD 214


>gi|125623941|ref|YP_001032424.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|124492749|emb|CAL97704.1| similar to heptaprenyl diphosphate synthase component II
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070715|gb|ADJ60115.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. cremoris NZ9000]
          Length = 319

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 8/229 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L +   ++   ++  L  +     SH+  +++D   +       GGK +R   +   + 
Sbjct: 2   DLKNNFWKDYPALEKELAQVHQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +++    L + A++E +H  +L+HDD+  +D+   RRG  T+  +Y    A+ AG+ L
Sbjct: 62  FTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLSAKYGPEIAVYAGDYL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
               F ++S    +L +   ++ + S+   +G  G L GQ+    +              
Sbjct: 120 FIAVFRLMSEHSLELSN--LTKNIGSIERLLG--GEL-GQLNHHFNLQQTLDDYIENISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L   +     +++  +    +R    G N+GI FQ+ DD LD   
Sbjct: 175 KTGELFALSASVAPLISK-NNALTKRAYKIGMNIGISFQIMDDYLDYAS 222


>gi|84685990|ref|ZP_01013886.1| geranylgeranyl pyrophosphate synthetase [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666083|gb|EAQ12557.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
           HTCC2654]
          Length = 286

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 85/202 (42%), Positives = 120/202 (59%), Gaps = 8/202 (3%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
            L   + YA+ GGK +R FLV E ASLF+V+   +    AAIE +H  SL+HDDLP MD+
Sbjct: 26  PLAEPMAYAVEGGKGLRGFLVIEGASLFDVSPDRSSYAAAAIEAVHASSLVHDDLPCMDD 85

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+PTVH+++DE T ++ G  L   AFE++  P     D IR++L  +L H  G  
Sbjct: 86  DDLRRGRPTVHVKWDEATGVLVGVALQFLAFELVGDPAVGSGD-IRAELARTLGHGAGGF 144

Query: 158 GMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           GM+ GQ LD+  E     +   ++  +Q  KTGAL  ++  +GAI+  A    +E LR +
Sbjct: 145 GMVMGQSLDLAAEVAPNPLTLDEIIALQAGKTGALFEWSAFAGAILGEAD---REPLRQY 201

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
           G  LG  FQ+ADD+LD E D  
Sbjct: 202 GAALGQAFQIADDILDIEGDAE 223


>gi|254561892|ref|YP_003068987.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
           DM4]
 gi|254269170|emb|CAX25136.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
           DM4]
          Length = 288

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 15/231 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
           +  +RI+T+LD+ +    +         L  AIRYA+  GG +IR  L    A     + 
Sbjct: 2   DVGRRIETVLDNAISHAEA---PGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             T+    AAIE +HC SL+HDDLP  D+  +RR KP+VH  +    A++ G+ L+  AF
Sbjct: 59  PATSEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E ++    +    +   + L         G++ GQ  + +  ++D  +       KTGAL
Sbjct: 119 ETLARGVVRSPTRLAGLVGLIARAAGSPSGIVAGQAWESE-PYVDLVEYQQA---KTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              A  +GA  A A        R  GE LG  +Q+ADDL D    +E++ K
Sbjct: 175 FAAATVAGAAAAGAPP---LPWRLLGECLGAAYQVADDLRDVACRQEEIGK 222


>gi|239928020|ref|ZP_04684973.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase [Streptomyces
           ghanaensis ATCC 14672]
 gi|291436352|ref|ZP_06575742.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291339247|gb|EFE66203.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 324

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 12/215 (5%)

Query: 24  LLQTASHMQTQHNDRLLS-AIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           LL+          D LL  A   AL   GK +R  L  E A          L   A IEC
Sbjct: 15  LLEAELLRWVGSGDSLLEVACLDALFPPGKLLRPILCMESAKAVGGTAEQVLAFAAGIEC 74

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SLIHDD+  +D   +RRG+ +   QY    A++AG+GL       + S     +  
Sbjct: 75  LHVASLIHDDI--VDQDPVRRGRASTAEQYGLAEALVAGDGLSMAGIAAMLSGGPAERVL 132

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAI 198
             +++ +       L+ M  G M + +   D       V  +   KT AL   AC++GAI
Sbjct: 133 HAARVTVE-----ALRHMCQGIMRETEIRGDLTCAVPTVLNVIHDKTAALTGAACQAGAI 187

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +A A+  + + L  +GE LG+ FQ+ DDLL    +
Sbjct: 188 LAGATPGQTQALHQYGEQLGMAFQIRDDLLPYTAE 222


>gi|226360248|ref|YP_002778026.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4]
 gi|226238733|dbj|BAH49081.1| geranylgeranyl pyrophosphate synthase [Rhodococcus opacus B4]
          Length = 385

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 34/258 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQ---HNDRLLSAIRYALLGGKKIRSFLVTE 60
            + ++    +  ++  L +      + +      + + + +   + L GGK++R      
Sbjct: 26  SVGTRPAALAAEVENALREFFTSRQALVDAVGGGYREAVTTLEDFVLRGGKRVRPAFAWT 85

Query: 61  CASLFNVNHL-----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---- 111
                  +         LR  +A+E +   +L+HDD+  +D    RRG PTVH+++    
Sbjct: 86  GWLGAGGDPRGPGAGPVLRACSALELVQACALVHDDI--IDASTTRRGFPTVHVEFEEQH 143

Query: 112 ------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
                        E  AI+ G+  L +A ++I         + R   + S         +
Sbjct: 144 RAGRWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDQSARISPVWSAMRT----EV 199

Query: 160 LGGQMLDIQDEFIDETQV---FMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGE 215
           LGGQ LDI +E   +  +     + + KT A  +      GA +A A  +     R FG 
Sbjct: 200 LGGQFLDISNEVRADESIDAAMKVNRYKTAAYTIERPLHLGAALAGADDSLVSAYRRFGT 259

Query: 216 NLGIIFQLADDLLDCEED 233
           ++GI FQL DDLL    D
Sbjct: 260 DIGIAFQLRDDLLGVFGD 277


>gi|210631749|ref|ZP_03296991.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279]
 gi|210159869|gb|EEA90840.1| hypothetical protein COLSTE_00876 [Collinsella stercoris DSM 13279]
          Length = 346

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 9/238 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGG-KKIRSFLV 58
               + L+E    I+  L +      + +     D    L   + +   GG K++R  L 
Sbjct: 10  EAFVAYLREKLPLIERALHEANAAPMAEVDAPARDLDRYLYEPLAHFTAGGGKRVRPVLA 69

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A         AL  G AIE     +LIHDD+   D   +RRG+P ++  + E  AI 
Sbjct: 70  LLGAEAVGGCAEQALSSGVAIELFQSAALIHDDIA--DASELRRGEPCLYRTHGEGLAIN 127

Query: 119 AGNGLLTYAFEIISSPKTQLKDN---IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           AG+  LT  FE++ +  +   D    +  +L+    H +  Q +  G   D + +     
Sbjct: 128 AGDLALTRVFEVVLNDASLPGDRRLRVLDELVRMERHTLEGQALDLGWARDGRWDVTSSD 187

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++MI+       +      GA+ A A+      L   G   G+ FQL DDLL+   D
Sbjct: 188 YLYMIEGKTAWYTVASPLRIGALAAGAADEAACELVELGRPAGLAFQLQDDLLNLVGD 245


>gi|158317462|ref|YP_001509970.1| polyprenyl synthetase [Frankia sp. EAN1pec]
 gi|158112867|gb|ABW15064.1| Polyprenyl synthetase [Frankia sp. EAN1pec]
          Length = 338

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR + T  
Sbjct: 53  GGKLVRPALALLSAEAAGAPAEVGLPAAVAVELVHDFSLLHDDL--MDGDRERRHRATAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + +     R+ ++L      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLLEVEGE--PGRRAAVIL----GAGVQDLVRGQAEDLL 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  V     ++  KTGAL+  +   GA++A A     + L  +G  LG  FQL D
Sbjct: 165 FESRSDVSVAETLHMEDGKTGALLACSASLGAVLAGAPDEVVDGLAEYGSRLGTAFQLID 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|254389005|ref|ZP_05004236.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|197702723|gb|EDY48535.1| polyprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 389

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 13/192 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+    A+E  H +SL+HDD+  +D    RR +PT   
Sbjct: 105 GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 162

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AIIAG+ L++ A  I++            +L      +  +  +  GQ  D   
Sbjct: 163 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRL------SACMIELCAGQQADCAF 216

Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  +C  GA+ A A       L  FG   G+ FQL 
Sbjct: 217 EGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLI 276

Query: 225 DDLLDCEEDLPK 236
           DDL+    D  +
Sbjct: 277 DDLIGIWGDPGR 288


>gi|332291133|ref|YP_004429742.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169219|gb|AEE18474.1| Polyprenyl synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 325

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 13/218 (5%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLF--NVNHLTALRVGAAI 79
           L +    +  +    LL+ I + +    GK++R   V   A +      +    R  + I
Sbjct: 17  LFEEKFSLSMRSKVALLNRITHYIVNRKGKQMRPMFVFLTAKMMNNGEVNDRTYRGASVI 76

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+  IRRG  +++  +    A++ G+ L +    ++ S      
Sbjct: 77  ELIHTASLVHDDV--VDDSNIRRGFFSLNALWKNKIAVLVGDFLFSKG--LLLSIDNGDT 132

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           D +    ++S+      +G L  Q+   +   I E   + I + KT  L+   C  GA  
Sbjct: 133 DLL---QIISVAVREISEGELL-QIEKARKLDITEDLYYEIIRQKTATLIAACCAMGACA 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
            HA   E +R+  FGE +G+ FQ+ DDL D     + K
Sbjct: 189 VHAKDKEVKRMHKFGELIGMAFQIKDDLFDYGTAKIGK 226


>gi|227522361|ref|ZP_03952410.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii
           ATCC 8290]
 gi|227090499|gb|EEI25811.1| possible trans-hexaprenyltranstransferase [Lactobacillus hilgardii
           ATCC 8290]
          Length = 325

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 11/215 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVGAA 78
           L+  LL+  +      + R+L+ ++    GGK +R       +    N+         AA
Sbjct: 19  LEPYLLKAVTLSNQPVHSRILALLK---SGGKLLRPGFFYIYSEFGENIPADKLRAGAAA 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +H  +LIHDD+  +D   +RRG  T+H QY +  AI AG+ L T  F+ +       
Sbjct: 76  IELLHVATLIHDDV--IDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDA 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            D  R    +    N  L  M      D+      +   F     KT  L   + E  AI
Sbjct: 134 TDLQRHIEAMQTILNGELDQMAFNYRQDM-----SQKDYFHEITGKTAELFKLSFEQSAI 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + HA ++        G  +G  +Q+ DD+LD   D
Sbjct: 189 LTHAPRDIVTLGGEIGLAIGQAYQIQDDILDYGGD 223


>gi|312214262|emb|CBX94255.1| hypothetical protein [Leptosphaeria maculans]
          Length = 941

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 73/257 (28%)

Query: 42  AIRYALLGGKKIRSFLVTECASLF------------------------------------ 65
           A  Y    GK +R  LV   +                                       
Sbjct: 118 AKYYTQSEGKYVRPMLVLLMSRATALTPRGPSSRAGRIPSVDASISHPTILADENPARPC 177

Query: 66  -NVNHLTAL------------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
            +V    A             R+    E IH  SL+HDD+  +D+   RR  P+ +I++ 
Sbjct: 178 SSVRDDAAYTTADSDILPSQRRLAEITELIHTASLLHDDV--IDHSVSRRSAPSANIEFG 235

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              A++AG+ LL  A   ++  +      + + ++           ++ G+ + +++   
Sbjct: 236 NKMAVLAGDFLLGRASVALARLRDPEVTELLATVIA---------NLVEGEFMQLKNTAR 286

Query: 173 DET----------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           DET                 +K+ +L+  +C + AI+  +S +  E    +G+NLG+ FQ
Sbjct: 287 DETNPQWTEETVSYYLQKTYLKSASLISKSCRAAAILGGSSDDVVEASYLYGKNLGLAFQ 346

Query: 223 LADDLLDCE---EDLPK 236
           L DD+LD     E+L K
Sbjct: 347 LVDDMLDYTVSGEELGK 363


>gi|300709739|ref|YP_003735553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
 gi|299123422|gb|ADJ13761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
          Length = 280

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 21/228 (9%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLF 65
             L+     +D  L+ +       + +   D L   + + AL GGK++R  +        
Sbjct: 2   EYLERRRALVDERLESV-------VGSVEPDGLAEEVGHTALSGGKRVRPTVTVLVCEAV 54

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 A+  G  IE +H  SL+ DD+  +D   +RRG  +   +Y    AI+  +  L 
Sbjct: 55  GGEPDDAVGFGVGIELVHNASLVIDDI--IDRSAMRRGVESAWTRYGYGPAIVGSDAQLG 112

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            AF + S           S    +      +  +  G+  ++      E +   + + KT
Sbjct: 113 EAFALFS-----------SDPRATQAVTEAMVELGEGEATELVARPETEAEYMELARRKT 161

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL   A E GAI A A     E +  + E +GI FQ+ DD+LD   D
Sbjct: 162 GALFRAAAELGAIAADADAVTVEAVGEYAERVGIAFQIRDDVLDATAD 209


>gi|326443312|ref|ZP_08218046.1| putative polyprenyl diphosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 343

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 13/192 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+    A+E  H +SL+HDD+  +D    RR +PT   
Sbjct: 59  GKAIRPALVLAAARALGGDPERAVPAAVAVELAHNFSLLHDDV--IDRDPTRRHRPTAWT 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AIIAG+ L++ A  I++            +L      +  +  +  GQ  D   
Sbjct: 117 VFGTADAIIAGDALVSLALRILAEDGHPASAAAAGRL------SACMIELCAGQQADCAF 170

Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  +C  GA+ A A       L  FG   G+ FQL 
Sbjct: 171 EGRGPQEVTLAECVEMAVAKTGALLGCSCALGALYADAGPGPTAALDAFGRQAGLAFQLI 230

Query: 225 DDLLDCEEDLPK 236
           DDL+    D  +
Sbjct: 231 DDLIGIWGDPGR 242


>gi|307325950|ref|ZP_07605149.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306888442|gb|EFN19429.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 359

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 95/242 (39%), Gaps = 24/242 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV--NH 69
             + +D +L+D L   A      H   L   ++  L GGK+IR  L            + 
Sbjct: 16  VRESVDVVLEDFLTAKARTTPQHHLPYLSGLLKDFLSGGKRIRPLLCVTGWQAVGGGEDT 75

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDE 113
               RV A +E  H ++LIHDD+  MD+   RRG+PT+H                 ++  
Sbjct: 76  DAVFRVAACLEMFHAFALIHDDV--MDDSDTRRGRPTIHRTLAALCAADRRPDQIERFGV 133

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             A++ G+  LT++ E++ S             +LS      + G      L    E  D
Sbjct: 134 SGAVLLGDLALTWSDELLHSAGLTPAQFDAVLPLLSEMRTEVMLGQYL--DLQATGELTD 191

Query: 174 ETQV-FMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           + +    + + KT    +      GA +A A+    E    +   LG  FQL DDLL   
Sbjct: 192 DVEATLTVNRYKTAKYTIERPLHVGAAIAGAAPEAMEAFTAYALPLGEAFQLRDDLLGVY 251

Query: 232 ED 233
            D
Sbjct: 252 GD 253


>gi|254818358|ref|ZP_05223359.1| GrcC1 [Mycobacterium intracellulare ATCC 13950]
          Length = 338

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 16/223 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + +++   RI+ ++D  L ++A  + T+    L  A      GGK+ R       
Sbjct: 15  DAAFAATVRDGVGRIEQLMDTEL-RSADEIMTESLTHLFKA------GGKRFRPLFTVLS 67

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  N +       GA IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG
Sbjct: 68  AQLGPNPDAADVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFM 179
           + L   A  ++S    +       +L+      +    M   + L    E  D       
Sbjct: 126 DYLFATASRLVSRLGPEA-----VRLIAETFAQLVTGQMRETRGLTGAAEGADPIEHYLK 180

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +   KT  L+  A   GA+ + A  ++ ERL   G  +G  FQ
Sbjct: 181 VVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQ 223


>gi|254470016|ref|ZP_05083420.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062]
 gi|211960327|gb|EEA95523.1| geranylgeranyl pyrophosphate synthase [Pseudovibrio sp. JE062]
          Length = 337

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 12/204 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + +    R+ +  GGK++R  L    A +F       + + A++E +H  +L+HDD+  +
Sbjct: 43  ELIPEIARHLIDSGGKRLRPMLTLAFAQMFGYEGEGHVILAASVEFMHTATLLHDDV--V 100

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRGK      +    +++ G+ LL  AF+++   ++     + +  +LS    I 
Sbjct: 101 DESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVDVRS-----LEALRILSEASAII 155

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            +G +  Q+   QD          + + KT AL   ACE    +A      +   R FG 
Sbjct: 156 AEGEVL-QLGAAQDTTTTYDMYLRVIEAKTAALFAAACEVSPEIADKGDEMRAAARKFGL 214

Query: 216 NLGIIFQLADDLLDCEE---DLPK 236
            LG  FQL DD LD      DL K
Sbjct: 215 ELGYAFQLVDDALDYGGATVDLGK 238


>gi|227512276|ref|ZP_03942325.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri
           ATCC 11577]
 gi|227084451|gb|EEI19763.1| possible trans-hexaprenyltranstransferase [Lactobacillus buchneri
           ATCC 11577]
          Length = 325

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 11/215 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVGAA 78
           L+  LL+  +      + R+L+ ++    GGK +R       +    N+         AA
Sbjct: 19  LEPYLLKAVTLSNQPVHSRILALLK---SGGKLLRPGFFYIYSEFGENIPADKLRAGAAA 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +H  +LIHDD+  +D   +RRG  T+H QY +  AI AG+ L T  F+ +       
Sbjct: 76  IELLHVATLIHDDV--IDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDA 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            D  R    +    N  L  M      D+      +   F     KT  L   + E  AI
Sbjct: 134 TDLQRHIEAMQTILNGELDQMAFNYRQDM-----SQKDYFHEITGKTAELFKLSFEQSAI 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + HA ++        G  +G  +Q+ DD+LD   D
Sbjct: 189 LTHAPRDIVTLGGEIGLAIGQAYQIQDDILDYGGD 223


>gi|307194127|gb|EFN76575.1| Decaprenyl-diphosphate synthase subunit 1 [Harpegnathos saltator]
          Length = 337

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 20/244 (8%)

Query: 1   MNGGLPSKLQENS----KRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLG-GKKIR 54
           M   LP  L +      + ++  L  L       +      + L  I  Y + G GK +R
Sbjct: 1   MQTQLPGSLSDYQIDPYRLVEDDLKYLFENIQEELINATTQKELQPIATYYMDGQGKALR 60

Query: 55  SFLVTECASLFNVNHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
             L    A + N +  + +      R+    E IH  SL+HDD+  +D    RRGKP+V+
Sbjct: 61  PMLSILMARVINYHKGSDVLSYSQRRIAMISEMIHVASLLHDDV--IDQSDSRRGKPSVN 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I + +    +AG+ +L  A  +++  +      + +Q++  L     +      Q+   +
Sbjct: 119 IIWSQKKVAMAGDYILAVAGTMLARIQNDDVTIVINQIITDLVQGEFM------QLGSKE 172

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E       F    +KT +LM    ++ A +A       E    +G N+G+ FQL DD L
Sbjct: 173 TENERFAHYFTKTYLKTASLMANCSKAVATLAEVDDRMVEMAYQYGRNVGLAFQLVDDFL 232

Query: 229 DCEE 232
           D   
Sbjct: 233 DFVA 236


>gi|73654130|gb|AAZ79360.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-378]
          Length = 145

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 91/145 (62%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +R GKPT+H  +DE TA++AG+ L   AF+I++ P T      R++L+ 
Sbjct: 1   HDDLPWMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G +GM GGQM+DI  E    D  QV  +Q++KTGAL+  + E GA++       
Sbjct: 61  TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPEG 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +  LR +  ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145


>gi|119504128|ref|ZP_01626209.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
 gi|119460131|gb|EAW41225.1| Polyprenyl synthetase [marine gamma proteobacterium HTCC2080]
          Length = 297

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 11/204 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLP 93
              L  A+ YA+  GG ++R  L    A    N     A    AAIE +HC SL+HDDLP
Sbjct: 30  PPLLAKALDYAVFPGGARVRPRLCLAVALANGNSEPRLASAAAAAIELLHCASLVHDDLP 89

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+   RRGKP++H  + +  A+++G+ L+  AF+ ++   + +   +R   + ++   
Sbjct: 90  CFDDAIERRGKPSLHAAFGQRIAVLSGDALIVAAFQQLAELGSSVTHPVRMAQVTAIVAA 149

Query: 154 --IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
              G  G+  GQ  + +       ++    + KTGAL   A  +GA  A       E  R
Sbjct: 150 GVGGPMGICAGQAWECE----PRVELEHYHQAKTGALFVAATCAGAAAAGVPS---EPWR 202

Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
             G ++G  +Q+ADD+ D   D  
Sbjct: 203 ELGNSIGEAYQVADDIQDAIADTA 226


>gi|116334218|ref|YP_795745.1| geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
           367]
 gi|116099565|gb|ABJ64714.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus brevis ATCC
           367]
          Length = 325

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 12/237 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L  +  +   ++ T L D LL+T        + ++L+ ++    GGK +R      
Sbjct: 1   MDRQLWRQFPQVEPQL-TALQDYLLRTVQLDNQPIHHKILALLK---SGGKLLRPGYFYL 56

Query: 61  CASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            ++  N      L+   AAIE +H  +LIHDD+  +D+   RRG  T+ + Y +  AI A
Sbjct: 57  FSTFGNATTPAQLQAGAAAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ + T  F+ +    T   D    Q  +     I LQG L    L+ + E I       
Sbjct: 115 GDFMFTVYFDQVLQSTT---DRSLIQNHIDAMRRI-LQGELHQMDLNYR-EDITLDAYLN 169

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               KT  L   +C  GA +A A Q+  +  R  G  +G  +Q+ DD+LD   D  K
Sbjct: 170 EIAGKTAELFALSCYQGAQLAGAPQSVIDHTREIGIAIGCAYQMLDDILDYAGDPKK 226


>gi|121704736|ref|XP_001270631.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           clavatus NRRL 1]
 gi|119398777|gb|EAW09205.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           clavatus NRRL 1]
          Length = 451

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 57/263 (21%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL----------------- 64
            L +    +    +  L    +Y     GK +R  LV   +                   
Sbjct: 90  FLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPRQSRSNFTPSQM 149

Query: 65  -------------------------------FNVNH---LTALRVGAAIECIHCYSLIHD 90
                                          F  +     T  R+    E IH  SL+HD
Sbjct: 150 VNDPISSPSVLADTNPDLSPLVSKSAEAQYDFAGDENILPTQRRLAEITELIHTASLLHD 209

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +DN   RR   + ++Q+    A++AG+ LL  A   ++  +      + + ++ +L
Sbjct: 210 DV--IDNAVTRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANL 267

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                +Q +      +    F DET         +KT +L+  +C + A++  ++    +
Sbjct: 268 VEGEFMQ-LKNTAADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSTPEVVD 326

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
               +G NLG+ FQL DDLLD  
Sbjct: 327 AAYAYGRNLGLAFQLVDDLLDYT 349


>gi|111018984|ref|YP_701956.1| polyprenyl synthetase [Rhodococcus jostii RHA1]
 gi|110818514|gb|ABG93798.1| polyprenyl synthetase [Rhodococcus jostii RHA1]
          Length = 346

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 97/222 (43%), Gaps = 17/222 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + ++E  K+++ +L        S +    +    +A+  A  GGK+ R       
Sbjct: 26  DPQLAATVREGLKQVEELL-------VSELSDGEDFLTEAALHLAKAGGKRFRPLFTVLT 78

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L    +  + +     +E +H  +L HDD+  MD   +RRG P+ + ++    AI+AG
Sbjct: 79  AQLGPKASDPSVVTAATVVELVHLATLYHDDV--MDEASMRRGAPSANSRWGNSVAILAG 136

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L  +A  ++S+   +      +  +++ T    + G +  + + ++ E         +
Sbjct: 137 DYLFAHASRLVSTLGPE------AVRIIAETFAELVTGQMR-ETIGLRGEQDPVEHYLKV 189

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              KTG+L+      G   + A  +  +RL   G+ +G  FQ
Sbjct: 190 VWEKTGSLIAACGRFGGTFSGADADHVKRLERLGDAVGTAFQ 231


>gi|31621279|gb|AAP59037.1| CrtE [Thiocapsa roseopersicina]
          Length = 288

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 14/221 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTA 72
           RI+  L   L    +   +    RL  A+R+A+  GG ++R  L    A+     +   A
Sbjct: 6   RIEQALAAALESVTT---SACPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDVEAA 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
              GA+IE +HC SL+HDDLP  D+  +RRG P+VH  Y E  A++AG+ L+  AFE ++
Sbjct: 63  DAAGASIELLHCASLVHDDLPCFDDSPLRRGLPSVHRAYGEPLAVLAGDALIVLAFENLA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
                      + L+++++  +G+  G++ GQ  + + +      V    + KTGAL   
Sbjct: 123 RVLGN-SPERLAPLLMTVSRAVGMPSGIVAGQAWECEPK----VSVADYHRAKTGALFAA 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A  +    A  +  + +  R  G+ +G  +Q+ADDL D   
Sbjct: 178 ATAA---GAQVAGADADAWRVVGDKIGEAYQVADDLRDVAA 215


>gi|298245028|ref|ZP_06968834.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552509|gb|EFH86374.1| Polyprenyl synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 367

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 29/262 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL------------L 48
           +   L + L  + + ID+ L     + A    T +       +RY L             
Sbjct: 3   LTSTLQATLLRHQQAIDSALHSAFERLAERDDTHNLQEYYGQMRYHLGWVDRHFQATRSN 62

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR--------VGAAIECIHCYSLIHDDLPSMDNGYI 100
            GK +RS L+            T+            AA+E  H ++LIHDD+  +D    
Sbjct: 63  PGKLMRSTLLLLAYEAVGAWEQTSNPDYLRRALPAAAAVELTHNFTLIHDDI--VDGDTE 120

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RR +PT+   +     I +G+G+   +   +     +  +   +  + +      L  + 
Sbjct: 121 RRHRPTLWTVWGMPNGINSGDGMFALSRLALWGVLDEGVEADIAARLGACLDKACLV-VA 179

Query: 161 GGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GQ LD+  E    I       + + KT  LM  + E GA +         RLR FGE +
Sbjct: 180 EGQYLDMSFEGRQDISVAMYIDMIRRKTAELMACSAEMGARLGTRDAEAIARLRSFGEAI 239

Query: 218 GIIFQLADDLLDCE---EDLPK 236
           GI FQ+ DDLL      E+L K
Sbjct: 240 GIAFQVRDDLLGVWASSEELGK 261


>gi|294055567|ref|YP_003549225.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM
           45221]
 gi|293614900|gb|ADE55055.1| Dimethylallyltranstransferase [Coraliomargarita akajimensis DSM
           45221]
          Length = 344

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 16/234 (6%)

Query: 6   PSKLQENSKRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            +   E    +   LDDL   L    + M+ +  D +     ++   GK++R  LV    
Sbjct: 14  AAGFAEVYAPVKPYLDDLDVFLQSQVAEMEPEVQDHVRYVFGHS---GKRLRPMLVAYSG 70

Query: 63  SLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                       +++G+ IE +H  +L+HDD+  +D    R  + T   ++    A++ G
Sbjct: 71  WEGPALTRADDLVKLGSVIELVHLATLVHDDI--LDEADTRHRQETAAKKFGPAAAVLIG 128

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L ++A ++ +   T       +Q       +    G +  Q     +        F +
Sbjct: 129 DVLFSHALKLAAEFDTNEVCRTVAQ-----ATSRVCAGEIA-QTYQRGEVNYSREFYFRV 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            ++KT  L   +C  GA +A  +    E    FG +LGI +Q+ DDL+D   D 
Sbjct: 183 IQLKTAELFEVSCRLGAKVAGYTDEFSEAAGLFGRHLGIAYQIFDDLVDLYADE 236


>gi|149197624|ref|ZP_01874674.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa
           HTCC2155]
 gi|149139194|gb|EDM27597.1| geranylgeranyl pyrophosphate synthetase [Lentisphaera araneosa
           HTCC2155]
          Length = 360

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 35/260 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECA 62
              S L   + +ID+ L +          T     L + +  Y   GGK++R  L    A
Sbjct: 5   DFKSDLSSIASQIDSYLLEH-----PFPNTVSPSWLGNEMSSYTKNGGKRLRPALCLWSA 59

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------------ 110
           +L +     A  V +A E  H ++L+HDD+  +D    RRG PT H              
Sbjct: 60  ALVSDCPELATSVASAAEIFHTWTLVHDDI--IDRDATRRGLPTSHTALADFARKEHGSE 117

Query: 111 ------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                 +    AI+ G+    +A  ++S    +   +  +  ++    +     +LGG+ 
Sbjct: 118 GDNADHFGLSMAILTGDLQQAWALRLVSEQANKDLTSGTALAVMDRLLSHVYPVLLGGEA 177

Query: 165 LDIQDEF-----IDETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKERLRCFGE 215
           +D++ E      I   ++  + +MKT  L+ F+ ++G ++         +       F  
Sbjct: 178 IDVEFEHREIDSISPEEILKMLEMKTACLLEFSAQAGVVVGLELDSFDHDLVHHAGQFAY 237

Query: 216 NLGIIFQLADDLLDCEEDLP 235
           N G+ FQL DD+L    D  
Sbjct: 238 NAGLAFQLQDDILGVFADEK 257


>gi|269128599|ref|YP_003301969.1| trans-hexaprenyltranstransferase [Thermomonospora curvata DSM
           43183]
 gi|268313557|gb|ACY99931.1| Trans-hexaprenyltranstransferase [Thermomonospora curvata DSM
           43183]
          Length = 331

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 24/240 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVT 59
           ++  L + ++E       ++++LL+Q+     T  +  L  A ++ +  GGK+ R  LV 
Sbjct: 11  VDAALAADMRERL----AVVEELLVQSV----TSDDPLLAEASKHLVEAGGKRFRPALVL 62

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             +   +      +     +E  H  +L HDD+  MD   +RRG+ + ++++    AI+ 
Sbjct: 63  LASHFGDPAAAGVVPAAVVVELTHLATLYHDDV--MDEATVRRGEESANVRWTNTVAILT 120

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQ 176
           G+ L   A ++++    Q                     ++ GQ+ +      D      
Sbjct: 121 GDYLFARASDLLADLGPQAV----------RIQARAFARLVRGQIAETSGPAPDADPLEH 170

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              +   KT +L+  +   GA++A A Q   E +    E +G+ FQL+DD+LD   +  +
Sbjct: 171 YLQVVADKTASLIAVSGHLGALLAGAPQQVVETITSACEKIGVAFQLSDDILDIASEFEQ 230


>gi|320095563|ref|ZP_08027226.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977471|gb|EFW09151.1| trans-hexaprenyltranstransferase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 337

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 18/224 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN---HLT 71
           RI   L+ +  Q A  + +  +         +  GGK++R  L   CA L          
Sbjct: 16  RISPGLEAVERQLAGAVSSSRDLVDELTAHLSAAGGKRLRPLLTLVCAQLGRPELALGER 75

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +    A+E  H  SL HDD+  MD+   RRG P+    +    AI+AG+ L   A  ++
Sbjct: 76  VITGATAVELTHLASLYHDDV--MDSAPTRRGVPSAQRLWGNNRAILAGDVLFARASALV 133

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGAL 188
           ++   ++             H +  + +  GQ+ +       E        +   KTG+L
Sbjct: 134 AALGPEMVTR----------HAVTFERLCTGQLNETFGPAPGEDPVEFYLRVLADKTGSL 183

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  A   GA+++ A     + +  FGE +G+ FQ+ADD+LD   
Sbjct: 184 VSSAAAFGALLSDAGAFVGDVVAEFGERVGVAFQIADDVLDLAS 227


>gi|15673324|ref|NP_267498.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis Il1403]
 gi|12724324|gb|AAK05440.1|AE006366_9 heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406878|gb|ADZ63949.1| heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis CV56]
          Length = 319

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 8/229 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L +   ++   ++  L  +     SH+  +++D   +       GGK +R   +   + 
Sbjct: 2   DLKNNFWKDYPELEKELVQVQQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +++    L + A++E +H  +L+HDD+  +D+   RRG  T+  +Y    A+ AG+ L
Sbjct: 62  FTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLSAKYGPEIAVYAGDYL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
               F ++S    +L +   ++ + S+   +G  G L GQ+    +              
Sbjct: 120 FIAVFRLMSEHSLELSN--LTKNIGSIERLLG--GEL-GQLNHHFNLQQTLDDYIENISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L   +     +++  +    +R    G N+GI FQ+ DD LD   
Sbjct: 175 KTGELFALSASVAPLISK-NNTLTKRAYKIGMNIGISFQIMDDYLDYAS 222


>gi|321470028|gb|EFX81006.1| hypothetical protein DAPPUDRAFT_303672 [Daphnia pulex]
          Length = 393

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------- 74
           L +      ++    L    +Y   G GK IR  +    A   N +              
Sbjct: 83  LYEDIREGLSETQPELKLIAQYYFNGEGKAIRPVITMCMARAINFHLDQNTPYVLQKQKK 142

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +    E IH  SL+HDD+  +D    RR +P+V+I + +  +IIAG+ +L  A ++++  
Sbjct: 143 IAQIAEMIHTASLVHDDV--IDVADSRRSRPSVNIVWGQRKSIIAGDFILAMASKMLARL 200

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           + +    + SQ++  L     +      Q+   +++             KT +L+ ++C+
Sbjct: 201 QNKQVIILLSQVLADLVQGEFM------QLGARENKDERFAHYSEKTFKKTASLIAYSCQ 254

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++++ A    +     +G  +G+ FQL DDLLD   
Sbjct: 255 AVSVLSGADSTLQAVAFQYGRQIGMAFQLVDDLLDFIA 292


>gi|313884478|ref|ZP_07818239.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620262|gb|EFR31690.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 328

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 91/229 (39%), Gaps = 19/229 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--- 65
           LQ N K++  ++D  ++     + TQ    L +A      GGK +R              
Sbjct: 11  LQANIKQVQALIDQRVVVANPQI-TQAVQALNAA------GGKFLRPAFFFLFTEFGPRV 63

Query: 66  --NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +      L+V A++E +H  +LIHDD+  +D+  +RR + T+  ++ +  A+  G+ L
Sbjct: 64  KDHTQKEKLLKVAASLEILHIATLIHDDI--IDDSPLRRSQVTIQAKFGKDVAVYTGDLL 121

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T  FE+I               + +      L G L  QM     +             
Sbjct: 122 FTIFFELILETMQTSD----YMAINAQAMKKILMGEL-DQMQLYYKQDQTIDDYLQAIAG 176

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT AL   A + GA    A  +        G  +G+ FQ+ DD+LD   
Sbjct: 177 KTAALFALAAQEGAYFGGADNHVVALAETIGHKIGMAFQILDDILDYSA 225


>gi|254418195|ref|ZP_05031919.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
 gi|196184372|gb|EDX79348.1| polyprenyl synthetase superfamily [Brevundimonas sp. BAL3]
          Length = 324

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 17/219 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN--VNHLT 71
             +D ++ D + Q+   +  +  + L+SA      GGK++R  L    A       + L+
Sbjct: 13  AEVDALIIDRM-QSDVPIIPKLAEHLVSA------GGKRLRPLLTVAAARASGTEGDILS 65

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             ++ AA+E IH  +L+HDD+  +D   +RRGK   H+ +   T+++ G+ L   AFE++
Sbjct: 66  PKKLAAAVEFIHTATLLHDDI--VDASELRRGKVAAHLIWGAPTSVLVGDFLFARAFELM 123

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
                   D++R+  +L+    +  +G +  Q+    D  +D+     I   KT  L   
Sbjct: 124 VET-----DSMRALGILAQASRVISEGEVL-QLTRAHDLNLDQATYLQIISAKTAELFAA 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A E+GA+ A A       LR +G  LGI FQLADD LD 
Sbjct: 178 AAEAGAVGAGADAAATAALRDYGMALGIAFQLADDALDY 216


>gi|322693011|gb|EFY84889.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium acridum CQMa
           102]
          Length = 449

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 191 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALAR 248

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D +     E           +KT +L+ 
Sbjct: 249 LRHVEVVELLATVIANLVE--GEFMQLKNTERDERSPKYSEETLSYYLQKTYLKTASLIS 306

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++ +A     +    +G NLG+ FQL DD+LD     +DL K
Sbjct: 307 KSCRAAALLGNADATTVDAAYSYGRNLGLAFQLVDDMLDYTRSGKDLGK 355


>gi|115402649|ref|XP_001217401.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus
           NIH2624]
 gi|114189247|gb|EAU30947.1| decaprenyl-diphosphate synthase subunit 1 [Aspergillus terreus
           NIH2624]
          Length = 449

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 96/272 (35%), Gaps = 61/272 (22%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL----------------- 64
            L +    +    +  L    +Y     GK +R  LV   +                   
Sbjct: 87  FLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPMLVLLMSQATALTPRKSRANGASSSV 146

Query: 65  --------------------------------FNVNH---LTALRVGAAIECIHCYSLIH 89
                                           F  +     T  R+    E IH  SL+H
Sbjct: 147 TVNDPITAPSILADNNPDLNPLVSSSLEAKYDFTGDENILPTQRRLAEITELIHTASLLH 206

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +DN   RR   + ++Q+    A++AG+ LL  A   ++  +      + + ++ +
Sbjct: 207 DDV--IDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIAN 264

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L     +Q +      +    F DE          +KT +L+  +C + A++  ++    
Sbjct: 265 LVEGEFMQ-LKNTAADEKHPVFTDETIEYYLQKTYLKTASLISKSCRAAALLGDSTPEVV 323

Query: 208 ERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           E    +G NLG+ FQL DD+LD      +L K
Sbjct: 324 ESAYAYGRNLGLAFQLVDDMLDYTVTDAELGK 355


>gi|226227338|ref|YP_002761444.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27]
 gi|226090529|dbj|BAH38974.1| polyprenyl synthase [Gemmatimonas aurantiaca T-27]
          Length = 334

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 14/231 (6%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLG--GKKIRSFLVTEC 61
           PS L    + I   + + L Q +  +      +  L+  ++  L+G  GK  R  L+   
Sbjct: 8   PSALAAALRDIQAPVQEELSQVSGELWRIVAADVPLVREVQDHLMGMKGKLFRPTLLLLS 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +S+   +   A+   A +E +H  +L+HDD  ++D+  +RRG PTV+  +    ++I G+
Sbjct: 68  SSIEGRSPKRAITFAAVVELMHLATLVHDD--AVDHSALRRGMPTVNSLFSHQVSVIMGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   A   + +       ++ +   ++   N    G +  Q+         E+    + 
Sbjct: 126 FLYLRALRELVTIG-----DLEAMRSITNASNEMTLGEIR-QLSAYDALAFGESDYETLI 179

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KT  L   AC+ GA+    +   +E +  FGE LG+ FQ+ADDLLD  E
Sbjct: 180 RAKTATLFMAACDVGALSG--APRYREAVTRFGERLGMAFQVADDLLDYTE 228


>gi|169779988|ref|XP_001824458.1| hexaprenyl pyrophosphate synthase [Aspergillus oryzae RIB40]
 gi|238505986|ref|XP_002384195.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           flavus NRRL3357]
 gi|83773198|dbj|BAE63325.1| unnamed protein product [Aspergillus oryzae]
 gi|220690309|gb|EED46659.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           flavus NRRL3357]
          Length = 451

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 97/271 (35%), Gaps = 60/271 (22%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL----------------- 64
            L +    +    +  L    +Y     GK +R  LV   +                   
Sbjct: 90  FLTKNIRQLLGSGHPTLDKVAKYYTKSEGKHMRPLLVLLMSQATALTPRHGRWSSSPSYT 149

Query: 65  -------------------------------FNVNH---LTALRVGAAIECIHCYSLIHD 90
                                          F  +     T  R+    E IH  SL+HD
Sbjct: 150 VNDPISSPSVLADTNPDLNPLVSSSAEAKYDFAGDENILPTQRRLAEITELIHTASLLHD 209

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +DN   RR   + ++Q+    A++AG+ LL  A   ++  +      + + ++ +L
Sbjct: 210 DV--IDNAVTRRSSSSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANL 267

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                +Q +      +    F DET         +KT +L+  +C + A++  ++    E
Sbjct: 268 VEGEFMQ-LKNTASDEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGDSTPQVVE 326

Query: 209 RLRCFGENLGIIFQLADDLLDCE---EDLPK 236
               +G NLG+ FQL DD+LD      +L K
Sbjct: 327 AAYAYGRNLGLAFQLVDDMLDYTVSDAELGK 357


>gi|205355397|ref|ZP_03222168.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346631|gb|EDZ33263.1| polyprenyl synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 275

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 16/193 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +   +  GKK+RS L+   A         A ++ AAIE IH  SL+HDD+  +D   +RR
Sbjct: 1   MLSNVKSGKKLRSKLLLAIAD----ESEIAFKICAAIELIHLASLLHDDI--IDESELRR 54

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G  +V+ ++    A++ G+ L + AF  +S        + R   ++S        G L  
Sbjct: 55  GARSVNAEFGTKNALMLGDILYSKAFYELSKM------DARFTSIISDAVVKLAIGELMD 108

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             L  +   I++     +   KT  L+  +   GAI+A   + +      +G+NLG+ FQ
Sbjct: 109 VDL-GEKFNINKEAYLKMIYNKTAVLIEASARCGAILAGLYEKD---FAEYGKNLGLAFQ 164

Query: 223 LADDLLDCEEDLP 235
           + DD+LD + D  
Sbjct: 165 MIDDILDIKSDEK 177


>gi|229496293|ref|ZP_04390013.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316871|gb|EEN82784.1| polyprenyl synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 325

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 11/190 (5%)

Query: 50  GKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK IR  L+    SL         +     +E +H  SLIHDD+  +D   +RRGKPT++
Sbjct: 45  GKHIRPILMGLLVSLQGKEPNQRTISCAVLLEMLHMASLIHDDV--IDQAPLRRGKPTLN 102

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y   +A++ G+ +L+ AF  + + +      IR+   L    + G   +L  Q+   +
Sbjct: 103 AFYGNHSAVLVGDYILSIAF--LRAAEIGGSSLIRTVANLGKHLSEG--ELLQIQVATER 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              IDE   F I + KT  L       G     A   E  ++   G++LGI FQL DD+ 
Sbjct: 159 --IIDEKNYFSIIEKKTATLFEACAALGMYSIDAKPEELLKMTQLGKHLGIAFQLRDDIF 216

Query: 229 DC--EEDLPK 236
           D   E ++ K
Sbjct: 217 DYTKESEVGK 226


>gi|68304991|gb|AAY90002.1| predicted dimethylallyltransferase FN1327 [uncultured bacterium
           BAC13K9BAC]
          Length = 274

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 16/231 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   ++      +  LD  L +  +      N +L   + Y++  GGK++R  ++ E A
Sbjct: 2   EINKYIKNEITSFNNDLDIFLNKYKT------NTKLYKVMCYSMKNGGKRLRPIIIKEVA 55

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              ++N    L+   AIE +H YSLIHDDLP MD+   RRG+ + H +YDE  AI+AGN 
Sbjct: 56  KSLSLNKNQFLKSMIAIELVHSYSLIHDDLPCMDDDDYRRGRLSTHKKYDEAQAILAGNS 115

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ--MLDIQDEFIDETQVFMI 180
           LLT AF +++                 L+   G +G+ GGQ   +D  ++ ++   +  I
Sbjct: 116 LLTMAFNLLAQDSNPSLVE-------LLSLLSGHEGLAGGQSLDVDTTEKKLNFKIIKKI 168

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            + KT  L  F   +  I+++ SQ E    R +G+ +G +FQ+ DD+ D E
Sbjct: 169 HEQKTAKLFEFCLAAPFIISNKSQKEINMSRKYGKIIGTVFQIIDDVHDYE 219


>gi|86751112|ref|YP_487608.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
 gi|86574140|gb|ABD08697.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
          Length = 287

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 12/210 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
           RI+  L + L Q           RL +A+R A+   G ++R  L    A+    ++    
Sbjct: 6   RIERALTEALSQADL---AGCPPRLAAAMRSAVFPRGARVRPRLCHSVAAACGDDNPATE 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
             GAA+E +HC SL+HDDLP  D   IRRG+P+VH  + E  A++ G+ L+  AF+ I+ 
Sbjct: 63  AAGAALELMHCASLVHDDLPCFDGADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQTIAR 122

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   ++   ++     + L G++ GQ  + +     E  +    + KTGAL   A 
Sbjct: 123 VNCAPDRLLKLTQVIGSAVGVPL-GIVAGQAWECE----SEINLAHYHRSKTGALFVAAT 177

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +GA  A A     E  R  GE +G  +Q+
Sbjct: 178 AAGAASAGADP---EPWRMVGEKIGEAYQV 204


>gi|218755158|ref|ZP_03533954.1| polyprenyl synthetase [Mycobacterium tuberculosis GM 1503]
 gi|289763564|ref|ZP_06522942.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503]
 gi|289711070|gb|EFD75086.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis GM 1503]
          Length = 350

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 14/225 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+ TV   +    AI+ G+ L   A  I++ 
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRSTVWSVWGVGGAILLGDALHATAVRILTG 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 151 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 205

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             C  GA++A+A       L  FG  LG+ FQ  DDL+    D  
Sbjct: 206 CCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 250


>gi|119493298|ref|XP_001263839.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya
           fischeri NRRL 181]
 gi|119411999|gb|EAW21942.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Neosartorya
           fischeri NRRL 181]
          Length = 451

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 57/263 (21%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL----------------- 64
            L +    +    +  L    +Y     GK +R  LV   +                   
Sbjct: 90  FLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPGKSRPNDVAPIS 149

Query: 65  -------------------------------FNVNH---LTALRVGAAIECIHCYSLIHD 90
                                          F  +     +  R+    E IH  SL+HD
Sbjct: 150 VNDPISSPSILADTNPDTNSLVSQSAEAQYDFAGDENILPSQRRLAEITELIHTASLLHD 209

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +DN   RR   + ++Q+    A++AG+ LL  A   ++  +      + + ++ +L
Sbjct: 210 DV--IDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANL 267

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                +Q +      +    F DET         +KT +L+  +C + A++  ++    E
Sbjct: 268 VEGEFMQ-LKNTVADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSTPEVVE 326

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
               +G NLG+ FQL DDLLD  
Sbjct: 327 AAYSYGRNLGLAFQLVDDLLDYT 349


>gi|111018119|ref|YP_701091.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1]
 gi|110817649|gb|ABG92933.1| geranylgeranyl pyrophosphate synthase [Rhodococcus jostii RHA1]
          Length = 330

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 31/214 (14%)

Query: 45  YALLGGKKIRSFLVT-----ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R                  +    LR  +A+E +   +L+HDD+  +D   
Sbjct: 15  FVLRGGKRVRPAFAWTGWVGAGGDARGPDAGPVLRACSALELVQACALVHDDI--IDAST 72

Query: 100 IRRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG PTVH+++                 E  AI+ G+  L +A ++I         + R
Sbjct: 73  TRRGFPTVHVEFAEQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMIRESGITPDASAR 132

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGA-LMCFACESGAIM 199
              + S         +LGGQ LDI +E   +  +     + + KT A  +      GA +
Sbjct: 133 ISPVWSAMRT----EVLGGQFLDISNEARADESIVAAMKVNRYKTAAYTIERPLHLGAAL 188

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A A        R FG ++GI FQL DDLL    D
Sbjct: 189 AGADDTLVSAYRRFGTDIGIAFQLRDDLLGVFGD 222


>gi|116629023|ref|YP_814195.1| geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
           33323]
 gi|116094605|gb|ABJ59757.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus gasseri ATCC
           33323]
          Length = 338

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 18/190 (9%)

Query: 49  GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GK +R   V      F  +    H    ++  +IE +H  +LIHDD+  +D   +R G+
Sbjct: 54  PGKMLRPACVMLFG-AFGPDADQKHDELQKIATSIETLHNATLIHDDI--IDESSMRHGR 110

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P++  +Y +  A+ AG+ L+  +  ++S     L   I             +Q +L G+ 
Sbjct: 111 PSIQTKYGKHIAVYAGDYLVALSLTLLSENAQSLHSVI--------ADGKTMQNILVGET 162

Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
               + +   I E +     K KTG L   AC  GA  +     +  + + FGE LG  F
Sbjct: 163 EQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAYESGTKVTKALKTKKFGEYLGQAF 222

Query: 222 QLADDLLDCE 231
           QL DD+LD  
Sbjct: 223 QLRDDILDYT 232


>gi|227509263|ref|ZP_03939312.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227191261|gb|EEI71328.1| possible trans-hexaprenyltranstransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 325

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 11/215 (5%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV-GAA 78
           L+  LL+  +      + R+L+ ++    GGK +R       +          LR   AA
Sbjct: 19  LEPYLLKAVTLSNQPVHSRILALLK---SGGKLLRPGFFYIYSEFGEKIPADKLRAGAAA 75

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +H  +LIHDD+  +D   +RRG  T+H QY +  AI AG+ L T  F+ +       
Sbjct: 76  IELLHVATLIHDDV--IDQSPLRRGVQTIHTQYGQKNAIYAGDYLFTCYFDQVLKSTHDA 133

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            D  R    +    N  L  M      D+      +   F     KT  L   + E  AI
Sbjct: 134 TDLQRHIEAMQTILNGELDQMAFNYRQDM-----SQKDYFHEITGKTAELFKLSFEQSAI 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + HA +N        G  +G  +Q+ DD+LD   D
Sbjct: 189 LTHAPRNIVTLGGEIGLAIGQAYQIQDDILDYGGD 223


>gi|152967171|ref|YP_001362955.1| polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361688|gb|ABS04691.1| Polyprenyl synthetase [Kineococcus radiotolerans SRS30216]
          Length = 365

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 95/253 (37%), Gaps = 27/253 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECAS 63
           P    +  + +  +LD+ L   AS ++    D   +L AI   L GGK++R         
Sbjct: 9   PVATSDLRRAVSDVLDEFLRDQASVLREVSEDCAPVLDAISALLSGGKRLRPAFCYWGFH 68

Query: 64  LFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------- 111
                      +   A++E     +LIHDD+  MD+   RRG+P  H ++          
Sbjct: 69  GTGGELPDEGIVTAAASLELFQAAALIHDDV--MDDSDTRRGQPAAHRRFEALHARSGWD 126

Query: 112 ------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----MLG 161
                     A++AG+  L ++ E+ S  +       R + + ++     + G    ML 
Sbjct: 127 GSRERFGLAGAVLAGDLCLGWSDELFSRARLAPDALDRGRRIFNVMRTQLMGGQYLDMLE 186

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGII 220
               D +       +   +   K+    +      G  +A AS +       FG  LG  
Sbjct: 187 QASSDQRGTDGAVDRARRVVTFKSAKYSIEHPLLLGGSLAGASTDLLADYSRFGLALGEA 246

Query: 221 FQLADDLLDCEED 233
           FQL DD+L    D
Sbjct: 247 FQLRDDVLGVFGD 259


>gi|158334022|ref|YP_001515194.1| polyprenyl synthetase [Acaryochloris marina MBIC11017]
 gi|158304263|gb|ABW25880.1| polyprenyl synthetase [Acaryochloris marina MBIC11017]
          Length = 298

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 10/190 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L       F      +L+   A+E IH   L+HDD+   DN   R   PT+  
Sbjct: 2   GKGLRPALCMATCQAFGGTEEQSLKSAVALEMIHNAFLVHDDVE--DNSECRHRMPTLQA 59

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-----GQM 164
           +     A+  G+ +   +  ++      L   + +Q +     ++ L+ + G     G +
Sbjct: 60  EQGVPIAVNIGDAMNALSLRLVRENIPMLGHQL-TQRIYEEFEHLMLKSLEGQASELGWV 118

Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            D + + I E     +   KT        C  G ++A     + +R   FG  +G  FQ+
Sbjct: 119 RDNRCD-ITEADYLQMILNKTCWYSFMHPCRIGGLIASKDTLDLDRFNKFGYFMGAAFQI 177

Query: 224 ADDLLDCEED 233
            DD+L+   D
Sbjct: 178 QDDVLNLVGD 187


>gi|116617356|ref|YP_817727.1| geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116096203|gb|ABJ61354.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 332

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 17/230 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           K+ +    ++  L ++L++ +   +   ++ + +AIR     GK +R  L    + L + 
Sbjct: 8   KIWDTFPELNPPLQNVLIEMSESWRIGFSE-IDNAIRSQASAGKLVRPALTLLFSELTDA 66

Query: 68  NH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A+ +GA+IE +H  +LIHDD+  +D   +RRG+ ++   + + TA+ AG+ LLT 
Sbjct: 67  PYNQKAIVLGASIELLHLATLIHDDI--IDESKLRRGQDSIQAHFGKDTAVYAGDYLLTG 124

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKM 183
              +++       + +  + +           +L G++    + ++ +T           
Sbjct: 125 MLSLLNDADNIQANKLALESLR---------NILFGELTQKHNRYLTDTSFDNYLTQITG 175

Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT AL   +   GA  +   S    + +   GENLGI FQL DD LD E 
Sbjct: 176 KTAALFKLSVLFGATSSDGVSSQLLDVVGKLGENLGIAFQLLDDYLDFES 225


>gi|282861046|ref|ZP_06270111.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE]
 gi|282563704|gb|EFB69241.1| Dimethylallyltranstransferase [Streptomyces sp. ACTE]
          Length = 349

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 13/192 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +  +ALR   A+E +H ++L+HDD+  +D    RR +PT   
Sbjct: 64  GKAIRPALVLAAARALGGDPESALRAAVAVELVHNFTLLHDDV--IDEDATRRHRPTAWA 121

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ +L  A  +++           ++L      +  +  +  GQ  D   
Sbjct: 122 VFGVPDAVVTGDAVLALAQRLLAEDPHPGSARASARL------SACVIELCAGQQADCAL 175

Query: 170 E-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  AC  GA+ A A +   E +  FG   G+ FQL 
Sbjct: 176 EEREPLDVTLDECLTMATAKTGALLGCACALGALYAGADEPAVEAMDGFGREAGLAFQLI 235

Query: 225 DDLLDCEEDLPK 236
           DDL+    D  +
Sbjct: 236 DDLIGIWGDTAR 247


>gi|261415263|ref|YP_003248946.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371719|gb|ACX74464.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 334

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 16/233 (6%)

Query: 3   GGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLV 58
               + L +    +   LD    +++Q A +     +DRL++        GK+IRS  L 
Sbjct: 6   ADFKAVLSQARDLVKVELDKTEQVIMQVAKNAPAGISDRLVTLFS---RKGKRIRSTLLC 62

Query: 59  TEC-ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                     +        AA+E +H  SL+HDD+  +D   +RRG+ T H ++    A+
Sbjct: 63  LLANCGAQKPDIDRVAHACAAVELLHLASLVHDDI--IDGTDVRRGQKTAHREWGTQVAV 120

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ +L+ +   +   + +        +++S   +  + G +  ++    D  +     
Sbjct: 121 LIGDYVLSQSMRCVIDEQARNIP-----VIISDAADKLIIGEIM-ELDHCGDMSLSRKSY 174

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             I   KT AL+  A   G I+A   Q   +     G + GI FQ+ DDLLD 
Sbjct: 175 NEIIDGKTAALIDAAARIGGILAGFDQPMVDECAKMGTHFGIAFQIIDDLLDY 227


>gi|62959201|gb|AAY23708.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-310]
          Length = 145

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 92/145 (63%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +R GKPT+H  +DE TA++AG+ L   AF+I++ P T     +R++L+ 
Sbjct: 1   HDDLPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G  GM GGQM+DI  E    D  QV  +Q++KTGAL+  + E GA++   +   
Sbjct: 61  TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +  LR +  ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145


>gi|126727249|ref|ZP_01743085.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
           HTCC2150]
 gi|126703458|gb|EBA02555.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
           HTCC2150]
          Length = 287

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 82/236 (34%), Positives = 132/236 (55%), Gaps = 16/236 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              +L + +  +   LD ++              + +A+ +A+ GGK++R FLV E ASL
Sbjct: 2   FQKRLSDAATLVQARLDAVIADFGDF-------PVAAAMAHAVTGGKRLRGFLVLEGASL 54

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V    AL   AA+E +H YSL+HDDLP MD+  +RRG+PTVH+++D  TA++AG+ L 
Sbjct: 55  HGVAANDALNAAAAVEALHAYSLVHDDLPCMDDDDLRRGQPTVHVKWDYATAVLAGDALQ 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMI 180
           T AF++++   T +  + +  L+  +    G  GM+ GQ +DI  E     +D   + ++
Sbjct: 115 TLAFDLLAD--TPVSADRQISLIKGMAVASGAAGMVLGQAMDIAAETAETPLDLNAITLL 172

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           Q  KTGAL+ ++ E+G I+A         +  +   LG+ FQ+ADD+LD E D  K
Sbjct: 173 QANKTGALIRWSAEAGPILAGDDPT---PMCDYATALGLAFQIADDILDIEGDAAK 225


>gi|240139478|ref|YP_002963953.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
           AM1]
 gi|240009450|gb|ACS40676.1| geranylgeranyl pyrophosphate synthase [Methylobacterium extorquens
           AM1]
          Length = 288

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 15/231 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
           +  +RI+T+LD+ +    +         L  AIRYA+  GG +IR  L    A     + 
Sbjct: 2   DVGRRIETVLDNAVSHAEA---PGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             T+    AAIE +HC SL+HDDLP  D+  +RR KP+VH  +    A++ G+ L+  AF
Sbjct: 59  PATSEAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E ++   T+    +   + L         G++ GQ  + +  ++D  +       KTGAL
Sbjct: 119 ETLARGVTRSPTRLAGLVGLIARAAGSPAGIVAGQAWESE-PYVDLVEYQQA---KTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              A  +GA  A A        R  GE LG  +Q+ADDL D    +E++ K
Sbjct: 175 FAAATVAGAAAAGAPP---LPWRLLGECLGAAYQVADDLRDVACRQEEIGK 222


>gi|254168668|ref|ZP_04875510.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
 gi|289596800|ref|YP_003483496.1| Polyprenyl synthetase [Aciduliprofundum boonei T469]
 gi|197622294|gb|EDY34867.1| polyprenyl synthetase superfamily [Aciduliprofundum boonei T469]
 gi|289534587|gb|ADD08934.1| Polyprenyl synthetase [Aciduliprofundum boonei T469]
          Length = 350

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 31/224 (13%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            H  ++    +L    Y L GGK+IR+ L+     +    +   ++  +++E I  Y LI
Sbjct: 30  EHWSSREACEILE--EYTLRGGKRIRAILMIVGYKMMGGKNDEIIKASSSLELIQSYLLI 87

Query: 89  HDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIIS 132
           HDD+  MD   +RRGK TVH                 ++ E  AIIAG+    YA EI+S
Sbjct: 88  HDDI--MDESDLRRGKDTVHKIYEKKHLKNGFGGRPIRFGESMAIIAGDLANAYAMEILS 145

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTG-AL 188
           S     +  +++   L    N  ++    GQ++DI     E   E  + ++ K KT    
Sbjct: 146 SSDFPAELKVKAIHKL----NEIIEYTGYGQIIDIYSGALEEFKEEDLLLLHKYKTARYT 201

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +      G I+A     E E +  +   +GI FQL DD+L    
Sbjct: 202 IEGPLALGIILAG---KEPEGIENYAIPVGIAFQLQDDILGLFG 242


>gi|320008620|gb|ADW03470.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 349

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 17/231 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           +    ++T+   +      H   Q  D   +A R     GK IR  LV   A     +  
Sbjct: 29  QLRAAVETLPGAIRRVAKYHFGWQDADGTPAAGR----AGKAIRPALVLAAARAVGGDPD 84

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+R   A+E  H ++L+HDD+  +D    RR +PT    +    A+I G+ + + A  +
Sbjct: 85  AAMRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWAVFGVPDAVITGDAMFSLALRL 142

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMKT 185
           ++        +   +L      +  +  +  GQ  D   E      +   +   +   KT
Sbjct: 143 LTDDPHPASPHAAGRL------STCVIELCAGQQADCGLEDRGPDDVTLDECLAMAMAKT 196

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           GAL+  AC  GA+   A +     +  FG   G+ FQL DDL+    D  +
Sbjct: 197 GALLGCACALGALYGGADERAVRAMDGFGREAGLAFQLIDDLIGIWGDTAR 247


>gi|170017917|ref|YP_001728836.1| geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
 gi|169804774|gb|ACA83392.1| Geranylgeranyl pyrophosphate synthase [Leuconostoc citreum KM20]
          Length = 332

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 15/228 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
               E S  +  +L+D+     S       + + +AIR  L  GK IR  L    + L +
Sbjct: 11  EDFPELSAPLQAVLEDM-----SASWHIGFEEIDTAIRSQLNAGKLIRPALTLLFSRLSD 65

Query: 67  VNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   A+ +GA++E +H  +LIHDD+  +D   +RRG  ++  Q+ + TA+ AG+ LLT
Sbjct: 66  NPYNAKAISLGASLELLHLATLIHDDI--IDESKLRRGHESIQSQFGKDTAVYAGDYLLT 123

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             F ++        + +  + +  +     +      Q  +  +   D        K KT
Sbjct: 124 GMFSLLERADKPAANKLALKALQEILFGELV------QKQNRYNLSADFNSYLTQIKGKT 177

Query: 186 GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            AL   +   G I     S+   E +   GEN+G+ FQL DD LD E 
Sbjct: 178 AALFRLSVSFGVISGDNYSEPLLETVSHLGENIGVTFQLLDDYLDFES 225


>gi|38018123|gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera]
          Length = 321

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 28/222 (12%)

Query: 31  MQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECASLFNVN-HLTALR------------ 74
           M      +L SA  Y   +G  GK+ R  ++   A+  NV     AL             
Sbjct: 1   MVVAEVPKLASAAEYFFKMGVEGKRXRPTVLLLMATALNVPLPRPALAEVPETLSTELRT 60

Query: 75  ----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +    E IH  SL+HDD+  +D+   RRG  +++I      A++AG+ LL+ A   
Sbjct: 61  RQQCIAEITEMIHVASLLHDDV--LDDAETRRGIGSLNIMMGNKVAVLAGDFLLSRACVA 118

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           ++S K     ++ + ++  L     +      QM    ++ +           KT +L+ 
Sbjct: 119 LASLKNTEVVSLLATVVEHLVTGETM------QMTSTSEQRVSMEYYLQKTYYKTASLIS 172

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +C++ A++A  +         +G+NLG+ FQL DD LD   
Sbjct: 173 NSCKAIALLAGQTAEVSMLAFEYGKNLGLAFQLIDDXLDFTG 214


>gi|297343242|pdb|3N3D|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           F Lactobacillus Brevis Atcc 367
 gi|297343243|pdb|3N3D|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           F Lactobacillus Brevis Atcc 367
          Length = 335

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 15/238 (6%)

Query: 4   GLPSKLQENSKRID---TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
            L  +L     +++   T L D LL+T        + ++L+ ++    GGK +R      
Sbjct: 2   SLDRQLWRQFPQVEPQLTALQDYLLRTVQLDNQPIHHKILALLK---SGGKLLRPGYFYL 58

Query: 61  CASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            ++  N      L+   AAIE +H  +LIHDD+  +D+   RRG  T+ + Y +  AI A
Sbjct: 59  FSTFGNAATPAQLQAGAAAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYA 116

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ + T  F+ +    T   D    Q  +   H I LQG L    L+ + E I       
Sbjct: 117 GDFMFTVYFDQVLKSTT---DRSLIQNHIDAMHRI-LQGELHQMDLNYR-EDITLDAYLN 171

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
               KT  L   +C  GA +A A Q+  +R R  G  +G  +Q+ DD+LD   D PK+
Sbjct: 172 EIAGKTAELFALSCYQGAQLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYAGD-PKR 228


>gi|322709158|gb|EFZ00734.1| decaprenyl-diphosphate synthase subunit 1 [Metarhizium anisopliae
           ARSEF 23]
          Length = 420

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 162 RLAEITELIHTASLLHDDV--IDHSVSRRGSPSANLEFGNKMAVLAGDFLLGRASVALAR 219

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D +     E           +KT +L+ 
Sbjct: 220 LRHVEVVELLATVIANLVE--GEFMQLKNTERDERSPKYSEETLSYYLQKTYLKTASLIS 277

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++ +A     +    +G NLG+ FQL DD+LD     +DL K
Sbjct: 278 KSCRAAALLGNADATTVDAAYSYGRNLGLAFQLVDDMLDYTRSGKDLGK 326


>gi|218200608|gb|EEC83035.1| hypothetical protein OsI_28120 [Oryza sativa Indica Group]
 gi|222640053|gb|EEE68185.1| hypothetical protein OsJ_26326 [Oryza sativa Japonica Group]
          Length = 399

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 21/244 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTE 60
             +  +L +    I   + ++  +  S +  +  +  L+A  +   G  GK+    ++  
Sbjct: 56  EQMAKELLDPLALIKDEVSEISNRLRSMVVAEVPELTLAAGYFFRAGAEGKRTCPTVLLL 115

Query: 61  CASLFNVN------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            AS  +++                +R+    E IH  SLIHDD+  +D+   RRG  +++
Sbjct: 116 MASSISMDMADPIVGSKNEIRERYMRLAEITELIHVTSLIHDDV--LDDANTRRGMDSLN 173

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
               +  A++AG+ LL+ AF   +       DN    L+L+   N  + G      +   
Sbjct: 174 CVMGKKLAVLAGDFLLSKAFSTAAVSL----DNAEVILLLATAVNNLVTGEFMQMRITPI 229

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +             KT AL+  +C++ A++A  +         +G++LGI +QL DD+L
Sbjct: 230 -QRCSMDYYLQKSYYKTAALISNSCKAVAVLAGQTAEVATLAYQYGKHLGIAYQLIDDIL 288

Query: 229 DCEE 232
           D   
Sbjct: 289 DFTG 292


>gi|153007031|ref|YP_001381356.1| polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152030604|gb|ABS28372.1| Polyprenyl synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 349

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 19/241 (7%)

Query: 6   PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
           P + Q     +  + + L  L +  +       ++L +A R+ +  GGK+IR  +     
Sbjct: 22  PERAQAALADVPALPETLAALEEHLTRATEDAEEKLRAAARHLVSAGGKRIRPMVTLLSC 81

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                +   A+    + E  H  +L+HDD+  +D+G +RRG+P   + +    ++++G+ 
Sbjct: 82  GACGGDMRAAVPYAVSAELTHSATLLHDDV--IDDGPLRRGQPASRVIWGNAVSVLSGDW 139

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFM 179
           LLT A EI+S+   +                  ++ ++ G++L           E     
Sbjct: 140 LLTRALEIVSAEPARSAALPPLL--------ATMRRLVEGEVLQLSLRSSFSATEKDYLD 191

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           +   KT +L  +A  +GA  A       E L  FGE +GI FQL DD LD   D   L K
Sbjct: 192 VVIGKTASLFGWAAAAGAWAAGQVGRIPEALVQFGEGIGIAFQLVDDALDYAADPQLLGK 251

Query: 237 K 237
           +
Sbjct: 252 R 252


>gi|94502254|ref|ZP_01308739.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833697|ref|YP_001597893.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS]
 gi|293977807|ref|YP_003543237.1| geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri
           DMIN]
 gi|94451192|gb|EAT14132.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206187|gb|ABS30497.1| polyprenyl synthetase [Candidatus Sulcia muelleri GWSS]
 gi|292667738|gb|ADE35373.1| Geranylgeranyl pyrophosphate synthase [Candidatus Sulcia muelleri
           DMIN]
          Length = 326

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 8/181 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR   V     +          +   IE IH  SLIHDD+  +D    RRG  +++ 
Sbjct: 47  GKYIRPIFVFLITKMLGNISKKTYDLAILIELIHTASLIHDDV--IDFSNTRRGFLSINA 104

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   TA+I G+ + + +  I          N+ S+ +  ++    L      QM    +
Sbjct: 105 IWQNKTAVIFGDYIFSKSLNIAIKNNYIDYLNLISKTIEQMSEGEIL------QMKYFNN 158

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            FI E    +I   KT  L+   CE  A   +  +     ++ FGE  G+ FQ+ DDLLD
Sbjct: 159 FFIKEYIYNIIIFKKTAILISACCEGCAKSLNKKKKIVLNIKKFGELAGMAFQIKDDLLD 218

Query: 230 C 230
            
Sbjct: 219 Y 219


>gi|76788536|ref|YP_330346.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           A909]
 gi|76563593|gb|ABA46177.1| polyprenyl synthetase family protein [Streptococcus agalactiae
           A909]
          Length = 326

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 12/234 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S    N   +   +D+        +Q ++ D   +  +    GGK++R       + L N
Sbjct: 2   SSYWNNYPELKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGN 61

Query: 67  V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               +     ++ A++E +H  +LIHDD+  +D+  +RRG  T+  ++ +  A+   + L
Sbjct: 62  KENQDTQQLKKIAASLEILHVATLIHDDV--IDDSPLRRGNMTIQSKFGKDIAVYTRDLL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T  F++I               + + +    L G L  QM    ++             
Sbjct: 120 FTVFFDLILESMADTP----FMTINAKSMRKILMGEL-DQMHLRYNQQQGIHHYLRAISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           KT  L   A + GA    A +         G N+G+ FQ+ DD+LD   D  KK
Sbjct: 175 KTAELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILDDILDYTAD--KK 226


>gi|188582094|ref|YP_001925539.1| polyprenyl synthetase [Methylobacterium populi BJ001]
 gi|179345592|gb|ACB81004.1| Polyprenyl synthetase [Methylobacterium populi BJ001]
          Length = 288

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 73/232 (31%), Positives = 111/232 (47%), Gaps = 17/232 (7%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNH 69
           +  +RI+T+LD  +    +        RL  AIRYA+  GG +IR  L    A     + 
Sbjct: 2   DVGRRIETVLDGAVAHAEA---PGAPPRLAEAIRYAVFPGGHRIRPRLCVAVALACGDDD 58

Query: 70  LTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             A    A  IE +HC SL+HDDLP  D+   RR KP+VH  +    A++ G+ L+  AF
Sbjct: 59  PAASDAAAGAIELLHCASLVHDDLPCFDDAATRRQKPSVHAAFGVPLAVLTGDALIVAAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           E ++    +    + + L+  +   +G   G++ GQ  + +   +D  +       KTGA
Sbjct: 119 ETLARGAARSPARL-AALVGLVARAVGSPSGIVAGQAWESE-PHVDLVEYQQA---KTGA 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           L   A  +GA  A A        R  GE LG  +Q+ADDL D    +E++ K
Sbjct: 174 LFAAATVAGAAAAGAPP---LPWRLLGECLGEAYQVADDLRDVACRQEEIGK 222


>gi|302554703|ref|ZP_07307045.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
 gi|302472321|gb|EFL35414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
          Length = 344

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 13/219 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL--TALRVGAAI 79
           D L +  SH+   H     +  R     GK +R  L   CA          +A+ V  A+
Sbjct: 30  DALPEEISHIVGYHIGWWDANGRPCEQKGKYVRPTLAVACARAIGGEAAVKSAIPVAVAV 89

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H +SL+HDD+  MD G +RR +PT    +    A++AG+ L+  A+ +++S  +   
Sbjct: 90  ELVHDFSLLHDDV--MDEGTVRRHRPTAWSLFGTSKAVLAGDLLVAEAYRLLAS--SGCD 145

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESG 196
           D  R   +L+      +  +  GQ +D+  E    +   +   +   KT AL+  ACE G
Sbjct: 146 DPERLVKILAQA----VHDLCVGQAMDLAFEDRVEVTLAETNAMVSGKTSALIAAACELG 201

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A+ A A       +  FG +LG++FQL DD+L    D  
Sbjct: 202 ALTAGADAEAAAVMCAFGGHLGMLFQLVDDILGVWGDPG 240


>gi|262202925|ref|YP_003274133.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247]
 gi|262086272|gb|ACY22240.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247]
          Length = 376

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 71/270 (26%), Positives = 105/270 (38%), Gaps = 39/270 (14%)

Query: 1   MNGGLPS--KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRS 55
           M   +P+   L E    ++  L +         +        +A     + L GGK+IR 
Sbjct: 1   MTSTIPTPTSLDEVPAAVEARLREFFAAALPVAEAISPAVGAAAEVVRDFVLQGGKRIRP 60

Query: 56  FLVTECASLF---------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
             V                       LRV AA+E +   +LIHDD+  +D    RRG+PT
Sbjct: 61  VFVYAGWRCGISARAAGADAAEAADTLRVCAALELVQACALIHDDI--IDRSDTRRGRPT 118

Query: 107 VHIQY----------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           VH  +                    AI+AG+  L +A +++         +  +  + + 
Sbjct: 119 VHRDFEHRHRDRQWSGDPGGFGVAAAILAGDLALAWADDLVHGLAPGAAPDDDATPLPAP 178

Query: 151 ---THNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCF-ACESGAIMAHAS 203
              T       +LGGQ LDI +E   +  V   + + + KT A       E GA MA A 
Sbjct: 179 VGATWASMRTEVLGGQYLDIVNEAAGDESVQAAYQVMEYKTAAYTVARPLELGARMAGAP 238

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +    LR  G +LGI FQL DDLL    D
Sbjct: 239 ADLIADLRSVGHDLGIAFQLRDDLLGVFGD 268


>gi|192290105|ref|YP_001990710.1| polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192283854|gb|ACF00235.1| Polyprenyl synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 288

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 13/211 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
           RI+  L + L Q           RL +A+R A+   G ++R  L    A     ++    
Sbjct: 6   RIERALTEALNQADM---AGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGIT 62

Query: 74  RVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E +HC SLIHDDLP  D   +RRG+P+VH  + E  A++AG+ ++  AF+ I+
Sbjct: 63  EAAGAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
             +      ++   ++     +   G++ GQ  + +     E  +    + KTGAL   A
Sbjct: 123 RAEGPADRLLKLTQIIGGAVGV-PFGIVAGQAWECE----TEINLAHYHRSKTGALFVAA 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQL 223
              GA  A +     E  R  GE +G  +Q+
Sbjct: 178 TAMGAASAGSDP---EPWRMVGEKIGEAYQV 205


>gi|215413281|ref|ZP_03421970.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
 gi|298526862|ref|ZP_07014271.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
 gi|298496656|gb|EFI31950.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 94_M4241A]
          Length = 350

 Score =  148 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 14/225 (6%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+  + L   A  I++ 
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLRDALHATAVRILTG 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 151 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 205

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             C  GA++A+A       L  FG  LG+ FQ  DDL+    D  
Sbjct: 206 CCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 250


>gi|168001212|ref|XP_001753309.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695595|gb|EDQ81938.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 317

 Score =  148 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)

Query: 31  MQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTECAS-------------LFNVNHLTALR 74
           M T     L  A  Y   LG  GK+ R  ++   ++             +F+   L   R
Sbjct: 1   MVTAEVPVLAMAAEYFFKLGVEGKRFRPMVLLLMSTSLMTSPSHGLQDLIFDDLRLRQQR 60

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +    E IH  SL+HDD+  +D+   RRG  +++       A++AG+ LL  A   ++S 
Sbjct: 61  IAEITEMIHVASLLHDDV--LDHADTRRGISSLNHVMGNKLAVLAGDFLLARASVALASL 118

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           +      + SQ++  L     +Q  +  + +   D              KT +LM  +C+
Sbjct: 119 RNTEVVELLSQVLEHLVTGEIMQLSVEDKDMSNMD------YYMQKTFYKTASLMANSCK 172

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + A++A   ++       +G +LG+ +QL DD LD   
Sbjct: 173 AIAVLAGQPEDVALLAFNYGRHLGLAYQLVDDALDYTG 210


>gi|163852146|ref|YP_001640189.1| polyprenyl synthetase [Methylobacterium extorquens PA1]
 gi|163663751|gb|ABY31118.1| Polyprenyl synthetase [Methylobacterium extorquens PA1]
          Length = 288

 Score =  148 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 15/231 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
           +  +RI+T+LD+ +    +         L  AIRYA+  GG +IR  L    A     + 
Sbjct: 2   DVGRRIETVLDNAVSHAEA---PGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              +    AAIE +HC SL+HDDLP  D+   RR KP+VH  +    A++ G+ L+  AF
Sbjct: 59  PAASEAAAAAIELLHCASLVHDDLPCFDDAPTRRQKPSVHAAFGVPLAVLTGDALIVAAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E ++    +    +   + L         G++ GQ  + +  ++D  +       KTGAL
Sbjct: 119 ETLARGVIRSPARLAGLVGLIARAAGSPSGIVAGQAWESE-PYVDLVEYQQA---KTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              A  +GA  A A        R  GE LG  +Q+ADDL D    +E++ K
Sbjct: 175 FAAATVAGAGAAGAPP---LPWRLLGECLGAAYQVADDLRDVACRQEEIGK 222


>gi|296138466|ref|YP_003645709.1| trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM
           20162]
 gi|296026600|gb|ADG77370.1| Trans-hexaprenyltranstransferase [Tsukamurella paurometabola DSM
           20162]
          Length = 326

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 88/223 (39%), Gaps = 21/223 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + ++ +  R++ ++ + + +    +       +  A+     GGK+ R       
Sbjct: 8   SDEFAAGVRADLARVEQVIAEGIAEADGCV-------IEEALHLFEAGGKRFRPMFTILS 60

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +        +   AA+E  H  +L HDD+  MD    RRG P+ + ++    AI+AG+
Sbjct: 61  GRIGGAMSDQVITAAAAMELTHLATLYHDDV--MDEADARRGAPSANARWGNSIAILAGD 118

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFM 179
            L   A    +    +    I                ++ GQML+++   E         
Sbjct: 119 YLFARASAFGADLGPRAVGVI----------AKCFGELVTGQMLELKGAGESDPVQHYLD 168

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
               KTG+L+      GA+   A ++  +R+   G+ +G+ FQ
Sbjct: 169 TIWGKTGSLIATCGLLGALHGGAEEDLAQRMYRIGDAIGMAFQ 211


>gi|62959233|gb|AAY23724.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-435]
          Length = 145

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 61/145 (42%), Positives = 91/145 (62%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +R GKPT+H  +DE TA++AG+ L   AF+I++ P T      R++L+ 
Sbjct: 1   HDDLPGMDDDELRHGKPTLHRAFDEATAVLAGDCLHALAFDILTQPDTSTDPFTRAELVA 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G +GM GGQM+DI  E    D  QV  +Q++KTGAL+  + E GA++       
Sbjct: 61  TLARASGHEGMAGGQMMDIVSEEQAYDLRQVTRLQQLKTGALLAASVEMGAVLGRVPPEG 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +  LR +  ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145


>gi|237785329|ref|YP_002906034.1| putative polyprenyl diphosphate synthase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758241|gb|ACR17491.1| putative polyprenyl diphosphate synthase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 361

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 99/259 (38%), Gaps = 33/259 (12%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTE- 60
           +P  + +  + +   L++  ++  S M+       + + +   + + GGK+IR       
Sbjct: 1   MPRSVDDVPRCVVAHLNEFFMERQSAMKAISPVADEAMAALTDFTINGGKRIRPTFAWLG 60

Query: 61  ---------CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-- 109
                      +  + +    +   +++E +   +LIHDD+  +D+   RRG PTVH   
Sbjct: 61  WMGSLQLTFSDAAEHPDADAVMHAASSLELLQSCALIHDDI--IDSSATRRGMPTVHEHF 118

Query: 110 --------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
                          Y    AI+ G+  L++A ++            R+           
Sbjct: 119 KQSHSAQAWHGRGESYGNAVAILIGDLALSWADDMFMEAALPPAQRDRAWQPWQDMRTEV 178

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFG 214
           + G +     + Q +         + + KT A  +      GA +A A Q+    LR FG
Sbjct: 179 VCGQIMDVTAEAQGDG-SLRTAERVNRYKTAAYTVERPLHIGAALAGAPQDTVTALRTFG 237

Query: 215 ENLGIIFQLADDLLDCEED 233
            ++G+ FQL DD L    D
Sbjct: 238 RDIGVAFQLRDDQLGVFGD 256


>gi|39934591|ref|NP_946867.1| polyprenyl synthetase [Rhodopseudomonas palustris CGA009]
 gi|39648440|emb|CAE26961.1| geranylgeranyl pyrophosphate synthase [Rhodopseudomonas palustris
           CGA009]
          Length = 288

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 13/211 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
           RI+  L + L Q           RL +A+R A+   G ++R  L    A     ++    
Sbjct: 6   RIERALTEALNQADM---AGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGIT 62

Query: 74  RVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E +HC SLIHDDLP  D   +RRG+P+VH  + E  A++AG+ ++  AF+ I+
Sbjct: 63  EAAGAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
             + Q    ++   ++     +   G++ GQ  + +     E  +    + KTGAL   A
Sbjct: 123 RAEGQADRLLKLTQIIGGAVGV-PFGIVAGQAWECE----TEINLAHYHRSKTGALFVAA 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQL 223
              GA  A +     E  R  GE +G  +Q+
Sbjct: 178 TAMGAASAGSDP---EPWRMVGEKIGEAYQV 205


>gi|296130537|ref|YP_003637787.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109]
 gi|296022352|gb|ADG75588.1| Trans-hexaprenyltranstransferase [Cellulomonas flavigena DSM 20109]
          Length = 335

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 24/236 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +  L  +L      ++ +L D +        T  +     A R+ +  GGK++R  L   
Sbjct: 11  DDALAERLSGRVALVEELLRDAV--------TYADPIAHDASRHLVDAGGKRLRPLLTLL 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L + N    +   A +E  H  +L HDD+  MD+  +RRG P+ H  +    AI+ G
Sbjct: 63  TAELGDGNRREVIDAAAVVELTHLATLYHDDV--MDSAPLRRGAPSAHEVWGNSVAILTG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + L   A  I+S    +                   + +  GQ+ +      DE      
Sbjct: 121 DLLFARASSIVSGLGPEAV----------RIQAQTFERLCLGQLHETVGPRPDEDPVEHY 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KT +L+  +   GA+ A    +    +  FGE +G+ FQLADD++D   D
Sbjct: 171 LQVLADKTASLIATSARFGAMFAGCRPDVVRTVTQFGEIVGVAFQLADDVIDLTSD 226


>gi|312597572|pdb|3PKO|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Citrate
 gi|312597573|pdb|3PKO|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Lactobacillus Brevis Atcc 367 Complexed With
           Citrate
          Length = 334

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 15/238 (6%)

Query: 4   GLPSKLQENSKRID---TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
            L  +L     +++   T L D LL+T        + ++L+ ++    GGK +R      
Sbjct: 9   SLDRQLWRQFPQVEPQLTALQDYLLRTVQLDNQPIHHKILALLK---SGGKLLRPGYFYL 65

Query: 61  CASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            ++  N      L+   AAIE +H  +LIHDD+  +D+   RRG  T+ + Y +  AI A
Sbjct: 66  FSTFGNAATPAQLQAGAAAIEILHVGTLIHDDV--IDDSPTRRGVRTIQMTYGQRNAIYA 123

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ + T  F+ +    T   D    Q  +   H I LQG L    L+ + E I       
Sbjct: 124 GDFMFTVYFDQVLKSTT---DRSLIQNHIDAMHRI-LQGELHQMDLNYR-EDITLDAYLN 178

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
               KT  L   +C  GA +A A Q+  +R R  G  +G  +Q+ DD+LD   D PK+
Sbjct: 179 EIAGKTAELFALSCYQGAQLAGAPQSVIDRTRDIGIAIGCAYQMLDDILDYAGD-PKR 235


>gi|71000625|ref|XP_754994.1| hexaprenyl pyrophosphate synthetase Coq1 [Aspergillus fumigatus
           Af293]
 gi|66852631|gb|EAL92956.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           fumigatus Af293]
 gi|159128008|gb|EDP53123.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Aspergillus
           fumigatus A1163]
          Length = 450

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 57/263 (21%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECAS------------------ 63
            L +    +    +  L    +Y     GK +R  LV   +                   
Sbjct: 89  FLTKNIRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALTPGKSRPNDVAPIS 148

Query: 64  --------------------LFNVNHLTAL-------------RVGAAIECIHCYSLIHD 90
                               L + +                  R+    E IH  SL+HD
Sbjct: 149 VNDPISSPSILADTNPDTNSLVSESAEAQYDFVGDENILPSQRRLAEITELIHTASLLHD 208

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +DN   RR   + ++Q+    A++AG+ LL  A   ++  +      + + ++ +L
Sbjct: 209 DV--IDNAVSRRSSNSANLQFGNKMAVLAGDFLLGRASVALARLRDPEVTELLATVIANL 266

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                +Q +      +    F DET         +KT +L+  +C + A++  ++    E
Sbjct: 267 VEGEFMQ-LKNTVADEKNPVFTDETISYYLQKTYLKTASLISKSCRAAALLGGSAPEVVE 325

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
               +G NLG+ FQL DDLLD  
Sbjct: 326 AAYSYGRNLGLAFQLVDDLLDYT 348


>gi|224108643|ref|XP_002314919.1| predicted protein [Populus trichocarpa]
 gi|222863959|gb|EEF01090.1| predicted protein [Populus trichocarpa]
          Length = 383

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 92/256 (35%), Gaps = 58/256 (22%)

Query: 6   PSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LG--GKKIRSFLVTE 60
            S ++E       + D+L  L      M      +L SA  Y   +G  GK+ R  ++  
Sbjct: 50  SSLVEEQLDPFSLVADELSVLANRLRSMVIAEVPKLASAAEYFFKMGVEGKRFRPTVLLL 109

Query: 61  CASLFNVN------------------------HLTALRVGAAIECIHCYSLIHDDLPSMD 96
            A+  NV                               V    E IH  SL+HDD+  +D
Sbjct: 110 MATALNVRILETTTSGVETTTRGVGDALTTELRKRQQSVAEITEMIHVASLLHDDV--LD 167

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +   RRG  +++       A++AG+ LL+ A   ++S K                     
Sbjct: 168 DADTRRGIGSLNFVMGNKVAVLAGDFLLSRACVALASLKN-------------------- 207

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
                    D    +            KT +L+  +C++ A++A  +         +G+N
Sbjct: 208 -------TEDDWCCYCSMEYYMQKTYYKTASLISNSCKAIALLAGQTTEVAMLAFEYGKN 260

Query: 217 LGIIFQLADDLLDCEE 232
           LG+ +QL DD+LD   
Sbjct: 261 LGLAYQLIDDVLDFTG 276


>gi|258651230|ref|YP_003200386.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
 gi|258554455|gb|ACV77397.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
          Length = 326

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 24/240 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L +++     R++ +L+  L+   S +    +  + +       GGK+ R       
Sbjct: 9   DPDLSARVAAGLGRVEDLLERELISEFSFVTEAASHLMHA-------GGKRFRPLFTLVA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +    +    +   A +E IH  +L HDD+  MD   IRRG  + + ++D   AI+ G
Sbjct: 62  AGVGPRPDAEEVVVASAVVELIHLATLYHDDV--MDEAQIRRGAKSANARWDNSIAILTG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQV 177
           + L  +A  +++S          +  +++ T       ++ GQ  +      DE      
Sbjct: 120 DFLFAHASRLVASLGED------AVRIIAETFA----ELVTGQTRETVGPGPDEDPIDHH 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLPK 236
             +   KT +L+        I + A +     LR +G  +G+ FQ++DD+LD    D  K
Sbjct: 170 LRVLDEKTASLIDTCARYAGIFSGAPEEHVLALRRYGRAVGVAFQISDDILDICSTDSGK 229


>gi|297170868|gb|ADI21887.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium
           HF0130_25O04]
          Length = 277

 Score =  148 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 15/217 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
            +  L D+L      ++         A R  L GGK+IR  LV  C S         L+V
Sbjct: 35  FENYLSDILDSLDRPVREF-------ARRVLLGGGKRIRPLLVYRCGSDSPDVTDDLLKV 87

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A +E +H  +L+HDD+  +D+  IRR + T+H +  E  AI+ G+ L ++A E+ +   
Sbjct: 88  SAILELVHVATLVHDDV--LDHAKIRRSRATIHTEIGEHAAILLGDALFSFALELATEFP 145

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           T      R   ++S        G +  Q     +  +     F   + KTG     +C++
Sbjct: 146 T-----TRICNIVSSATRRTCSGEIM-QTFARGNYDLGLPDYFSFIQDKTGEFFKASCQA 199

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           GA +A  S+   + +  FG +LG+ +Q+ DDL+D   
Sbjct: 200 GAFLAGHSECILDLVGEFGLSLGLNYQIFDDLVDSFG 236


>gi|296206331|ref|XP_002750182.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial
           [Callithrix jacchus]
          Length = 308

 Score =  148 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 25/224 (11%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALR- 74
           +T+  +LL+ T+          L     Y   G  K  R  +V   A   N++H  +   
Sbjct: 1   ETLFQELLISTS---------ELKEMSEYYFDGKEKAFRPIIVALMARACNIHHNNSQHV 51

Query: 75  ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +    E IH  SL+HDD+  +D+   RRGK TV   + E  A++AG+ +L+ A 
Sbjct: 52  QASQRTIALIAEMIHTASLVHDDV--IDDASSRRGKHTVDKIWGEKKAVLAGDLILSAAS 109

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             ++        +I +Q++     +  L      Q+   ++E             KT +L
Sbjct: 110 IALARIGNTTVISILTQVIEDSVRSEFL------QLGSKENENERFAHYLEKPFKKTASL 163

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  + ++ +++        E    +G+N+GI FQL DD+LD   
Sbjct: 164 IANSYKAVSVLGCPDPVVHEIAYQYGKNIGIAFQLIDDVLDFTS 207


>gi|295663240|ref|XP_002792173.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
           brasiliensis Pb01]
 gi|226279348|gb|EEH34914.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
           brasiliensis Pb01]
          Length = 533

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 275 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALAR 332

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L    LD ++ F  E           +K+ +L+ 
Sbjct: 333 LRDPEVIELVATVIANLIE--GEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSASLIS 390

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++ H+S    E    +G NLG+ FQL DD+LD     E+L K
Sbjct: 391 KSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGK 439


>gi|332287924|ref|YP_004422825.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
 gi|313848497|emb|CBY17501.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci RD1]
 gi|325506551|gb|ADZ18189.1| geranylgeranyl pyrophosphate synthase [Chlamydophila psittaci 6BC]
 gi|328915189|gb|AEB56022.1| geranyltranstransferase [Chlamydophila psittaci 6BC]
          Length = 293

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 76/228 (33%), Positives = 112/228 (49%), Gaps = 16/228 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+T ++D L +      +     + + + YAL  GGK+IR  LV   A   ++     L 
Sbjct: 14  IETGIEDSLDEFGPKGFS-----IRAPVEYALTSGGKRIRPMLVCMIAKGLDMGRD-VLD 67

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-- 132
              AIE IH  +LI DDLP MD+   RRG+PTVH  +DE +A++A   L+  A+  I   
Sbjct: 68  SALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLN 127

Query: 133 -----SPKTQLKDNIRSQLMLSLT--HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
                S     K+   +  M+S     N G+ G+LGGQ  D+         V  I   KT
Sbjct: 128 AKKLKSAGVDSKEVDYAYDMISDITDKNFGVHGVLGGQYEDMFFNNEGPEHVQSIIHKKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL   AC SG +    +     ++R F +  G++FQ+ DD+LD  +D
Sbjct: 188 GALFEIACVSGWLFGGGTPECVPQVREFSQTFGLLFQIKDDILDIHQD 235


>gi|329943348|ref|ZP_08292122.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10]
 gi|328814895|gb|EGF84885.1| polyprenyl synthetase family protein [Chlamydophila psittaci Cal10]
          Length = 290

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 76/228 (33%), Positives = 112/228 (49%), Gaps = 16/228 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+T ++D L +      +     + + + YAL  GGK+IR  LV   A   ++     L 
Sbjct: 11  IETGIEDSLDEFGPKGFS-----IRAPVEYALTSGGKRIRPMLVCMIAKGLDMGRD-VLD 64

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-- 132
              AIE IH  +LI DDLP MD+   RRG+PTVH  +DE +A++A   L+  A+  I   
Sbjct: 65  SALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLN 124

Query: 133 -----SPKTQLKDNIRSQLMLSLT--HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
                S     K+   +  M+S     N G+ G+LGGQ  D+         V  I   KT
Sbjct: 125 AKKLKSAGVDSKEVDYAYDMISDITDKNFGVHGVLGGQYEDMFFNNEGPEHVQSIIHKKT 184

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL   AC SG +    +     ++R F +  G++FQ+ DD+LD  +D
Sbjct: 185 GALFEIACVSGWLFGGGTPECVPQVREFSQTFGLLFQIKDDILDIHQD 232


>gi|242813946|ref|XP_002486271.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218714610|gb|EED14033.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 465

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 30/199 (15%)

Query: 57  LVTECASLFN--VNHLTALRV----GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           L    A L          L          E IH  SL+HDD+  +DN   RR   + + Q
Sbjct: 184 LTAPAAELEGIFGEDPNILPAQRRLAEITELIHTASLLHDDV--IDNAVTRRSSSSANTQ 241

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +    A++AG+ LL  A   ++  +      + + ++           ++ G+ + +++ 
Sbjct: 242 FGNKMAVLAGDFLLGRASVALARLRNPEVIELLATVIA---------NLVEGEFMQLKNT 292

Query: 171 FIDE----------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             DE          T       +KT +L+  +C + A++ +++ +  E    +G NLG+ 
Sbjct: 293 ASDERSPVFTDDTITYYLQKTYLKTASLISKSCRAAALLGNSTPDIVEAAYSYGRNLGLA 352

Query: 221 FQLADDLLDCE---EDLPK 236
           FQL DD+LD      +  K
Sbjct: 353 FQLVDDMLDYTVNSAEFGK 371


>gi|116512181|ref|YP_809397.1| geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|116107835|gb|ABJ72975.1| Geranylgeranyl pyrophosphate synthase [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 319

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 8/229 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L +   ++   ++  L  +     SH+  +++D   +       GGK +R   +   + 
Sbjct: 2   DLKNNFWKDYPALEKELAQVHQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +++    L + A++E +H  +L+HDD+  +D+   RRG  T+  +Y    A+ AG+ L
Sbjct: 62  FTDLSESERLALAASVEMMHTATLVHDDV--IDHADTRRGVATLSAKYGPEIAVYAGDYL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
                 ++S    +L +   ++ + S+   +G  G L GQ+    +              
Sbjct: 120 FIAVIRLMSEHSLELSN--LTKNIGSIERLLG--GEL-GQLNHYFNLQQTLDDYIENISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L   +     +++  +    +R    G N+GI FQ+ DD LD   
Sbjct: 175 KTGELFALSASVAPLISK-NNALTKRAYKIGMNIGISFQIMDDYLDYAS 222


>gi|85094730|ref|XP_959949.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A]
 gi|60389720|sp|Q7S565|COQ1_NEUCR RecName: Full=Probable hexaprenyl pyrophosphate synthase,
           mitochondrial; Short=HPS; Flags: Precursor
 gi|28921406|gb|EAA30713.1| decaprenyl-diphosphate synthase subunit 1 [Neurospora crassa OR74A]
          Length = 449

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 103/265 (38%), Gaps = 70/265 (26%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------------------------- 64
           + + H     +A  Y    GK +R  +V   +                            
Sbjct: 102 LGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATALCPKAPQRQQSTLQASAAIDTSIS 161

Query: 65  -------FNVNHLTAL-------------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
                  FN +  T +             R+    E IH  SL+HDD+  +D+   RRG 
Sbjct: 162 PLNILSDFNPSDATPVSIPADTDILPSQRRLAEITELIHTASLLHDDV--IDHSESRRGA 219

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P+ ++++    A++AG+ LL  A   ++  +      + + ++           ++ G+ 
Sbjct: 220 PSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVVELLATVIA---------NLVEGEF 270

Query: 165 LDIQDEFIDE----------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           + +++   DE          T       +KT +L+  +C + A++  A     +    +G
Sbjct: 271 MQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGGADAATVDAAYLYG 330

Query: 215 ENLGIIFQLADDLLDC---EEDLPK 236
           +NLG+ FQL DD+LD    E++L K
Sbjct: 331 KNLGLAFQLVDDMLDYTRSEKELGK 355


>gi|62959187|gb|AAY23701.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-316]
          Length = 145

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/145 (41%), Positives = 92/145 (63%), Gaps = 2/145 (1%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MD+  +R GKPT+H  +DE TA++AG+ L   AF+I++ P T     +R++L+ 
Sbjct: 1   HDDMPGMDDDEMRHGKPTLHKAFDEATAVLAGDSLHALAFDILTQPDTSTDPFVRAELVA 60

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G  GM GGQM+DI  E    D  QV  +Q++KTGAL+  + E GA++   +   
Sbjct: 61  TLARASGHDGMAGGQMMDIVSEEQSYDLRQVTRLQQLKTGALLAASVEMGAVLGRVAPEG 120

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
           +  LR +  ++G+ FQ+ADD+LD E
Sbjct: 121 RTHLRAYARDIGLAFQIADDILDVE 145


>gi|94270612|ref|ZP_01291782.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
 gi|93450734|gb|EAT01802.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
          Length = 340

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 30/244 (12%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  +LQ  + +I+T++       A+ ++   + RL   + +AL  GGK+IR  L    A 
Sbjct: 6   LKKQLQAAAGQIETVM-------AADLEGVTSPRLREVLEHALFAGGKRIRPLLTLLAAR 58

Query: 64  L------FNVNHL--------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           L        V              R+  A E +H  SL+HDD+  +D+   RRG+ TV+ 
Sbjct: 59  LTTAANHGGVPTEPPAADQATDQQRLAIAFEYLHTASLLHDDV--IDHAAQRRGRETVNS 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++D+  AI+AG+ L   A  +  +   Q       +L+ S T  +     L  +    +D
Sbjct: 117 RWDQGHAILAGDFLHARAMWLAGNYGGQPC----LELIASATEAMVAAEFLQAEAAAARD 172

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                   F + + KT AL+  AC+ G +       + + LR +G NLG+ FQ+ DDLLD
Sbjct: 173 WR--RETYFAVLEGKTAALIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIIDDLLD 230

Query: 230 CEED 233
              D
Sbjct: 231 FLGD 234


>gi|189464891|ref|ZP_03013676.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM
           17393]
 gi|189437165|gb|EDV06150.1| hypothetical protein BACINT_01235 [Bacteroides intestinalis DSM
           17393]
          Length = 324

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 9/175 (5%)

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+  Y+   A++ G+
Sbjct: 57  AKLYGRICPETLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIYNNKVAVLVGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL  +   +          + S+L  +L+    L      Q+ ++      E   F + 
Sbjct: 115 YLLATSLVQVGKTHNYAIIEVVSRLGQNLSEGELL------QLSNVSSLQFSEEVYFDVI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KT  L     +SGA+    +  + E  R FGE +G+ FQ+ DD+ D   D  K
Sbjct: 169 RKKTAVLFAACTKSGALSVGVTDEQAEFARQFGEYIGLCFQIKDDIFDYY-DSKK 222


>gi|167565893|ref|ZP_02358809.1| polyprenyl synthetase [Burkholderia oklahomensis EO147]
 gi|167572980|ref|ZP_02365854.1| polyprenyl synthetase [Burkholderia oklahomensis C6786]
          Length = 222

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 8/160 (5%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH +SLI DDLP+MDN   R GKP++H +YD  TA++A +GL++ AF  +S     L  
Sbjct: 1   MIHVFSLIQDDLPAMDNDDTRHGKPSLHTKYDVATALLACDGLISQAFLTLSEI--PLPT 58

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
           + R  L   L  +IG  G+ GGQ +D       ++  ++  + +MKTGAL+  +   G +
Sbjct: 59  DGRVALAHELASSIGSSGLTGGQYIDLTSVGTHLNREELERMHRMKTGALIRASVRMGVL 118

Query: 199 MAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                   S      +  +G  LG+ +Q+ DD+LD   DL
Sbjct: 119 CGSGCRTESSAAWNAMGEYGNLLGLAYQVVDDILDSTSDL 158


>gi|41410156|ref|NP_962992.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398989|gb|AAS06608.1| GrcC1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 335

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 23/225 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + +++   RI+ ++D  L ++A  + T+    L  A      GGK+ R       
Sbjct: 15  DPAFAATVRDGVGRIEQLMDTEL-RSADDIMTESLTHLFKA------GGKRFRPLFTVLS 67

Query: 62  ASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +        + +  A IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG
Sbjct: 68  AQIGPDPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
           + L   A  ++S    +    I                ++ GQM + +            
Sbjct: 126 DYLFATASRLVSRLGPEAVRLI----------AETFAQLVTGQMRETRGRKQGSDPIEHY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             +   KT  L+  A   GA+ + A  ++ ERL   G  +G  FQ
Sbjct: 176 LKVVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQ 220


>gi|296117524|ref|ZP_06836108.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969255|gb|EFG82496.1| polyprenyl synthetase [Corynebacterium ammoniagenes DSM 20306]
          Length = 366

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 36/254 (14%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI----RYALLGGKKIRSFLVTEC--- 61
           + E  K +   L D L +    +       + +AI    R+ L GGK+IR   V      
Sbjct: 12  IAEVPKHVRAELADFLKEREPQIAQIGRP-VTNAIEHLERFILGGGKRIRPLYVWAGFVA 70

Query: 62  --ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ--------- 110
               L + +    LR  +++E I   +LIHDD+  +D    RRG PTVH           
Sbjct: 71  ADGLLGDEDPQAVLRAASSLEFIQSCALIHDDI--VDASDTRRGNPTVHRAVEAEHRKLG 128

Query: 111 -------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
                  +    AI+ G+  L +A +++           R++             ++GGQ
Sbjct: 129 WTGDPEAFGRSAAILIGDMSLVWAEDMLLDSGLSQAALQRTREPWRAMRT----EVIGGQ 184

Query: 164 MLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +LD+  E      V +   + + KT A  +      GA +A A Q   +  R +G ++GI
Sbjct: 185 LLDVSLEAAAIESVELSDSVNRFKTAAYTIERPLHLGAAIAGAPQKLIDAFRGYGRDIGI 244

Query: 220 IFQLADDLLDCEED 233
            FQL DD L    D
Sbjct: 245 AFQLRDDQLGVFGD 258


>gi|229490670|ref|ZP_04384508.1| bifunctional short chain isoprenyl diphosphate synthase
           [Rhodococcus erythropolis SK121]
 gi|229322490|gb|EEN88273.1| bifunctional short chain isoprenyl diphosphate synthase
           [Rhodococcus erythropolis SK121]
          Length = 359

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 10/204 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           L D+     S +    +    +A+  A  GGK+ R       A L  V +  ++   A +
Sbjct: 50  LSDVEELLVSELSDGEDFLTEAALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITAATV 109

Query: 80  -ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E +H  +L HDD+  MD   +RRG P+ + ++    AI+AG+ L  +A  ++S+   + 
Sbjct: 110 TELVHLATLYHDDV--MDEASMRRGAPSANARWGNSVAILAGDYLFAHASRLVSTLGPE- 166

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                +  +++ T    + G +  + + ++ E         +   KTG+L+  +   G  
Sbjct: 167 -----AVRIIAETFAELVTGQMR-ETIGVKKEQDPVEHYLKVVWEKTGSLIAASGRFGGT 220

Query: 199 MAHASQNEKERLRCFGENLGIIFQ 222
            + A     ERL   G+ +G  FQ
Sbjct: 221 FSGADAAHIERLERLGDAVGTAFQ 244


>gi|171679677|ref|XP_001904785.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939464|emb|CAP64692.1| unnamed protein product [Podospora anserina S mat+]
          Length = 454

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 99/261 (37%), Gaps = 59/261 (22%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV----------------------- 67
           + + H     +A  Y    GK +R  +V   +   ++                       
Sbjct: 104 LGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATSLCPKAPQRQQATLQASMGIDSSIS 163

Query: 68  ----------------------NHLTALR----VGAAIECIHCYSLIHDDLPSMDNGYIR 101
                                 +H   L     +    E IH  SL+HDD+  +D+   R
Sbjct: 164 PLSVLSDFNPSATAVAPEAETNDHPDILPSQRRLAEITELIHTASLLHDDV--IDHSESR 221

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P+ ++++    A++AG+ LL  A   ++  +      + + ++ +L    G    L 
Sbjct: 222 RGSPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVIELLATVIANLVE--GEFMQLK 279

Query: 162 GQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
               D ++    E           +KT +L+  +C + A++  +     +    +G+NLG
Sbjct: 280 NTARDERNPQWSEETLTYYLQKTYLKTASLISKSCRAAALLGGSDAATVDAAYAYGKNLG 339

Query: 219 IIFQLADDLLDC---EEDLPK 236
           + FQL DD+LD    E++L K
Sbjct: 340 LAFQLVDDMLDYTRSEQELGK 360


>gi|255349012|ref|ZP_05381019.1| dimethylallyltransferase [Chlamydia trachomatis 70]
 gi|255503551|ref|ZP_05381941.1| dimethylallyltransferase [Chlamydia trachomatis 70s]
 gi|255507230|ref|ZP_05382869.1| dimethylallyltransferase [Chlamydia trachomatis D(s)2923]
 gi|289525671|emb|CBJ15152.1| dimethylallyltransferase [Chlamydia trachomatis Sweden2]
 gi|296435238|gb|ADH17416.1| dimethylallyltransferase [Chlamydia trachomatis E/150]
 gi|296438957|gb|ADH21110.1| dimethylallyltransferase [Chlamydia trachomatis E/11023]
          Length = 291

 Score =  148 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
                  +++  L D L    +         L   I YALLGG K++R  LV   A   +
Sbjct: 3   YFSVYRSKVEKKLRDSLGDFGN-----TQGGLRDPIEYALLGGGKRVRPLLVGLFAEGVH 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 L    AIE IH  +LI DDLP MD+  +RRGKP+VH  +DE +A++A   L+  
Sbjct: 58  KERD-VLDTAIAIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPA 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQGMLGGQMLDIQDEFIDETQV 177
           A+  I      LK  +  +  +   +           G+ G+LGGQ  DI      +  V
Sbjct: 117 AYARIRKNAKALKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDIFFHDFSKENV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             I K KTGAL   AC SG +     +     +  F E+ G++FQ+ DDL D  +D
Sbjct: 177 LGIIKKKTGALFEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQD 232


>gi|154148638|ref|YP_001406457.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter hominis ATCC BAA-381]
 gi|153804647|gb|ABS51654.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter hominis ATCC BAA-381]
          Length = 297

 Score =  148 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 18/173 (10%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                +L++ A +E IH  SL+HDD+  +D   IRRG P+++  +    A++ G+   + 
Sbjct: 43  GESEISLKLCAIVELIHAASLLHDDV--IDESDIRRGNPSINAVFGSKNAVMLGDIFYSK 100

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKM 183
           AF  + S              +S T +  +  +  G+++D+   ++   +      +   
Sbjct: 101 AFFELCSFN----------DFISKTISNAVFKLSIGELMDVKMSENFNKNRENYLTMIYY 150

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KT  L+    + GA +A++     E+   +G+NLG+ FQ+ DD+LD  +D  K
Sbjct: 151 KTAGLIESVAKIGAFLANSD---CEKFAEYGKNLGLAFQIIDDILDITQDSKK 200


>gi|301300397|ref|ZP_07206599.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851999|gb|EFK79681.1| polyprenyl synthetase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 328

 Score =  148 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 16/235 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L  +  E +K I+ +  +L       +   + D   +  + A  GGK +R      
Sbjct: 1   MAFNLWLQYPELAKNIEKVKHNL----QDKISVDYPDLQAALSKMASNGGKFLRPAFFLL 56

Query: 61  CASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
              L       V+    + +  ++E +H  +LIHDD+  +D+   RRG+ +V  Q+ +  
Sbjct: 57  FTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRGEVSVQSQFGKDI 114

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ AG+ L T  F++I+              + S T    L G L  QM    +      
Sbjct: 115 AVYAGDYLFTVFFDLITDNVLDTPFF----KINSRTMKKILLGELN-QMKHRYNTQQTFL 169

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                   KT  L   A   GA    AS          G+N+GI FQ+ DD+LD 
Sbjct: 170 NYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGISFQILDDILDY 224


>gi|46138837|ref|XP_391109.1| hypothetical protein FG10933.1 [Gibberella zeae PH-1]
          Length = 444

 Score =  148 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 96/261 (36%), Gaps = 59/261 (22%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS--------------------------- 63
           + + H     +A  Y    GK +R  +V   +                            
Sbjct: 94  LGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATYLCPKTPATVPTVTHRGVDTSLSPA 153

Query: 64  --LFNVNHLTA--------------------LRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
             L +VN                         R+    E IH  SL+HDD+  +D+   R
Sbjct: 154 QILADVNPAAHPLSSPEQEIADANSDILPSQRRLAEIAELIHTASLLHDDV--IDHSVSR 211

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P+ ++++    A++AG+ LL  A   ++  +      + + ++ +L    G    L 
Sbjct: 212 RGSPSANLEFGNKMAVLAGDFLLGRASVALARLRNPEVVELLATVIANLVE--GEFMQLK 269

Query: 162 GQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
               D ++    E           +KT +L+  +C + A++ +      +    +G NLG
Sbjct: 270 NTERDERNPKWSEETVTYYLQKTYLKTASLISKSCRAAALLGNTDAVTVDAAYSYGRNLG 329

Query: 219 IIFQLADDLLDCE---EDLPK 236
           + FQL DDLLD      DL K
Sbjct: 330 LAFQLVDDLLDYTQSGSDLGK 350


>gi|94264378|ref|ZP_01288169.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
 gi|93455207|gb|EAT05423.1| Geranyltranstransferase [delta proteobacterium MLMS-1]
          Length = 340

 Score =  148 bits (373), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 30/244 (12%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           L  +LQ  + +I+T++       A+ ++   + RL   + +AL  GGK+IR  L    A 
Sbjct: 6   LKKQLQAAAGQIETVM-------AADLEGVTSPRLREVLEHALFAGGKRIRPLLTLLAAR 58

Query: 64  LFNVNHLTALR--------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           L    +   +               +  A E +H  SL+HDD+  +D+   RRG+ TV+ 
Sbjct: 59  LTTAANHGGVPTEPPAADQATDRQRLAIAFEYLHTASLLHDDV--IDHAAQRRGRETVNS 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++D+  AI+AG+ L   A  +  +   Q       +L+ S T  +     L  +    +D
Sbjct: 117 RWDQGHAILAGDFLHARAMWLAGNYGGQPC----LELIASATEAMVAAEFLQAEAAAARD 172

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                   F + + KT AL+  AC+ G +       + + LR +G NLG+ FQ+ DDLLD
Sbjct: 173 WR--RETYFAVLEGKTAALIAAACQCGVVAGGGDYRQGQALRVYGANLGLAFQIIDDLLD 230

Query: 230 CEED 233
              D
Sbjct: 231 FLGD 234


>gi|15605359|ref|NP_220145.1| dimethylallyltransferase [Chlamydia trachomatis D/UW-3/CX]
 gi|237803057|ref|YP_002888251.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804978|ref|YP_002889132.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311451|ref|ZP_05354021.1| dimethylallyltransferase [Chlamydia trachomatis 6276]
 gi|255317752|ref|ZP_05358998.1| dimethylallyltransferase [Chlamydia trachomatis 6276s]
 gi|3329075|gb|AAC68232.1| Geranylgeranyl pyrophosphate synthase [Chlamydia trachomatis
           D/UW-3/CX]
 gi|231273278|emb|CAX10193.1| dimethylallyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274291|emb|CAX11086.1| dimethylallyltransferase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436165|gb|ADH18339.1| dimethylallyltransferase [Chlamydia trachomatis G/9768]
 gi|296437093|gb|ADH19263.1| dimethylallyltransferase [Chlamydia trachomatis G/11222]
 gi|296438025|gb|ADH20186.1| dimethylallyltransferase [Chlamydia trachomatis G/11074]
 gi|297140527|gb|ADH97285.1| dimethylallyltransferase [Chlamydia trachomatis G/9301]
 gi|297748758|gb|ADI51304.1| Dimethylallyltransferase [Chlamydia trachomatis D-EC]
 gi|297749638|gb|ADI52316.1| Dimethylallyltransferase [Chlamydia trachomatis D-LC]
          Length = 291

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
                  +++  L D L    +         L   I YALLGG K++R  LV   A   +
Sbjct: 3   YFSVYRSKVEKKLRDSLGDFGN-----TQGGLRDPIEYALLGGGKRVRPLLVGLFAEGVH 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 L    AIE IH  +LI DDLP MD+  +RRGKP+VH  +DE +A++A   L+  
Sbjct: 58  KERD-VLDTAIAIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPA 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQGMLGGQMLDIQDEFIDETQV 177
           A+  I      LK  +  +  +   +           G+ G+LGGQ  DI      +  V
Sbjct: 117 AYARIRKNAKALKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDIFFHDFSKENV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             I K KTGAL   AC SG +     +     +  F E+ G++FQ+ DDL D  +D
Sbjct: 177 LGIIKKKTGALFEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQD 232


>gi|298707167|emb|CBJ29940.1| solanesyl diphosphate synthase-like protein [Ectocarpus
           siliculosus]
          Length = 479

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALR----------VGAAIECIHCYSLIHDDLPSMDNGY 99
           GK+ R  +V   A       + A R          +G   E IH  SLIHDD+  +D   
Sbjct: 192 GKRFRPTIVALMALATCDKPMEAHRESEEYTRQGQLGQITEMIHVASLIHDDV--LDEAE 249

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG   VH  Y    A++AG+ LL  A  +++        +++   +++   +  +QG 
Sbjct: 250 VRRGGMAVHKLYSNKVAVLAGDYLLARASVLLARLG-----DVQVVEIMATALDSLVQGE 304

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENL 217
           +    +D + + +D +        KT +L+  AC+S AI+       +       +G ++
Sbjct: 305 IMQLKMDPE-KLLDISLYLRKSYYKTASLITNACKSCAILGGHEFDSDVATAAEEYGYHM 363

Query: 218 GIIFQLADDLLDCEE 232
           G+ FQ+ DD+LD   
Sbjct: 364 GLAFQIVDDILDIVG 378


>gi|226305198|ref|YP_002765156.1| polyprenyl diphosphate synthase [Rhodococcus erythropolis PR4]
 gi|226184313|dbj|BAH32417.1| putative polyprenyl diphosphate synthase [Rhodococcus erythropolis
           PR4]
          Length = 349

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 10/204 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           L D+     S +    +    +A+  A  GGK+ R       A L  V +  ++   A +
Sbjct: 40  LSDVEELLVSELSDGEDFLTEAALHLARAGGKRFRPLFTILTAQLGPVPNDPSIITAATV 99

Query: 80  -ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E +H  +L HDD+  MD   +RRG P+ + ++    AI+AG+ L  +A  ++S+   + 
Sbjct: 100 TELVHLATLYHDDV--MDEASMRRGAPSANARWGNSVAILAGDYLFAHASRLVSTLGPE- 156

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                +  +++ T    + G +  + + ++ E         +   KTG+L+  +   G  
Sbjct: 157 -----AVRIIAETFAELVTGQMR-ETIGVKKEQDPVEHYLKVVWEKTGSLIAASGRFGGT 210

Query: 199 MAHASQNEKERLRCFGENLGIIFQ 222
            + A     ERL   G+ +G  FQ
Sbjct: 211 FSGADAAHIERLERLGDAVGTAFQ 234


>gi|197104247|ref|YP_002129624.1| polyprenyl synthetase family protein [Phenylobacterium zucineum
           HLK1]
 gi|196477667|gb|ACG77195.1| polyprenyl synthetase family protein [Phenylobacterium zucineum
           HLK1]
          Length = 335

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 10/205 (4%)

Query: 33  TQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
                 ++ A+   L+ G  K++R  L    A L      + L++ AA+E IH  +L+HD
Sbjct: 36  MDSPVPVIPALADHLIAGSAKRLRPLLTIAAARLAGARDDSCLKLAAAVEFIHTATLLHD 95

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +D+  +RRG+   H+ +   ++++ G+ L   AFE++    +     + +  +L+ 
Sbjct: 96  DV--VDSSQLRRGRVAAHLIWGAPSSVLVGDFLFARAFELMVGAGS-----MAALEILAR 148

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              +  +G +  Q+    D  + +     I   KT  L   A E+GA+ A AS      L
Sbjct: 149 ASRVISEGEVL-QLTRSHDLDLTQEVYIEIIGAKTAELFAAAAEAGAVAAGASPERCRAL 207

Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
           R FG++LG+ FQL DD LD   D  
Sbjct: 208 RRFGQDLGLAFQLVDDALDYSGDAK 232


>gi|311111182|ref|ZP_07712579.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22]
 gi|311066336|gb|EFQ46676.1| polyprenyl synthetase superfamily [Lactobacillus gasseri MV-22]
          Length = 341

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 21/193 (10%)

Query: 49  GGKKIRSFLVTECASLFNVN----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GK +R   V      F  +    H    ++  +IE +H  +LIHDD+  +D   +R G+
Sbjct: 54  PGKMLRPACVMLFG-AFGPDADQKHDELQKIATSIETLHNATLIHDDI--IDESSMRHGR 110

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P++  +Y +  A+ AG+ L+  +  ++S     L   I             +Q +L G+ 
Sbjct: 111 PSIQTKYGKHIAVYAGDYLVALSLTLLSENAQSLHSVI--------ADGKTMQNILVGET 162

Query: 165 LDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRC--FGENLG 218
               + +   I E +     K KTG L   AC  GA  +        + L+   FGE LG
Sbjct: 163 EQYNNAYNIDISEKEYLDQIKGKTGVLFGLACFIGAYESGTKVTKVTKALKAKKFGEYLG 222

Query: 219 IIFQLADDLLDCE 231
             FQL DD+LD  
Sbjct: 223 QAFQLRDDILDYT 235


>gi|289642098|ref|ZP_06474250.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508061|gb|EFD29008.1| Polyprenyl synthetase [Frankia symbiont of Datisca glomerata]
          Length = 338

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          L    A+E +H +SL+HDDL  MD    RR +PT  
Sbjct: 53  GGKLVRPALALLSAEAAGAAVEVGLPGAVAVELVHDFSLLHDDL--MDGDTERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A +++   + +     R+ +ML      G+Q ++ GQ  D+ 
Sbjct: 111 TVFGADGAILAGDALLGLATQVLLEVEGE--PGRRAAIML----GAGVQDLVRGQAEDLY 164

Query: 169 DEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  ++  V     ++  KTGAL+  +   GA++A       + L  FG  LG  FQL D
Sbjct: 165 FETRNDVTVADTLTMEDGKTGALLSCSAAIGAVLAGGRTELVDGLAEFGSRLGTAFQLVD 224

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 225 DLLGIWGD 232


>gi|76789367|ref|YP_328453.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13]
 gi|76167897|gb|AAX50905.1| dimethylallyltransferase [Chlamydia trachomatis A/HAR-13]
          Length = 291

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
                  +++  L D L    +         L   I YALLGG K++R  LV   A   +
Sbjct: 3   YFSVYRSKVEKKLRDSLGDFGN-----TQGGLRDPIEYALLGGGKRVRPLLVGLFAEGVH 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 L    AIE IH  +LI DDLP MD+  +RRGKP+VH  +DE +A++A   L+  
Sbjct: 58  KERD-VLDTAIAIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPA 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQGMLGGQMLDIQDEFIDETQV 177
           A+  I      LK  +  +  +   +           G+ G+LGGQ  DI      +  V
Sbjct: 117 AYARIRKNAKALKAVVSCEQDVEEAYEDILELIELRFGIGGILGGQYEDIFFHDFSKENV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             I K KTGAL   AC SG +     +     +  F E+ G++FQ+ DDL D  +D
Sbjct: 177 LGIIKKKTGALFEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQD 232


>gi|256545799|ref|ZP_05473155.1| heptaprenyl diphosphate synthase component II [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398495|gb|EEU12116.1| heptaprenyl diphosphate synthase component II [Anaerococcus
           vaginalis ATCC 51170]
          Length = 333

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 13/237 (5%)

Query: 1   MNGGLPSKLQENSKR--IDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLG-GKKIRSF 56
           MN  +   L + SK+  ID ++D  L++    +   + + +L + I   L+  GK IR+ 
Sbjct: 1   MNFAISECLAKESKQTIIDYLIDKTLVEMREILGDYKQSQKLYNIIENTLISSGKMIRTK 60

Query: 57  LVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L+   + +         +   AA+E  H  SLIHDD+  +D+  IRR   ++  +Y +  
Sbjct: 61  LLIYISLMGENQISDKIISQCAAVEITHLASLIHDDI--IDDSLIRRSHRSIQSKYGKDV 118

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ AG+ +++  F  ++      + +I S  +  + +         GQ L      I E 
Sbjct: 119 AVFAGDYMISKVFSYLAKKGLVEEISIISDTIRDMCNGEV------GQNLIKYRLDISEK 172

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + F     KT +     C  GA  A  +Q +  ++  FG+NLG++FQL DD+LD   
Sbjct: 173 EYFENICGKTASFFKTVCYFGAKNAGFNQIDINKMVEFGKNLGLMFQLKDDILDLFS 229


>gi|94984603|ref|YP_603967.1| dimethylallyltransferase [Deinococcus geothermalis DSM 11300]
 gi|94554884|gb|ABF44798.1| Dimethylallyltransferase [Deinococcus geothermalis DSM 11300]
          Length = 575

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 25/230 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
              +  L ++L      ++    D + +       GGK+ R  +    A    ++     
Sbjct: 263 AAFEARLREVLRSRVEFIELIGEDLVAA-------GGKRARPTVTFLAAQALGLDGQDPR 315

Query: 72  ---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +   IE +H  SL+HDDL  +D+   RRG+     ++  V ++++G+ +     
Sbjct: 316 WQTVTDLAVCIELLHSASLLHDDL--IDDADTRRGQQAAFRRFGNVVSVMSGDFM----- 368

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKT 185
               +    L   +     L+         +  G++L  Q     E        I   KT
Sbjct: 369 ---LARLLTLLAAMPQGPALTRAFGQTASQICEGEVLQFQVAAYAEYGLAPYLDIIHGKT 425

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            AL+  A  S A++ +A + ++  L  FG   G+ FQ+ DDLLD   D  
Sbjct: 426 AALIELAAFSPALLLNAPEAQRAALATFGREYGLAFQIQDDLLDLMGDEA 475


>gi|227891019|ref|ZP_04008824.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius ATCC 11741]
 gi|227867428|gb|EEJ74849.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius ATCC 11741]
 gi|300214709|gb|ADJ79125.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
           Farnesyltransferase / Heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius CECT 5713]
          Length = 328

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 16/235 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L  +  E +K I+ +  +L       +   + D   +  + A  GGK +R      
Sbjct: 1   MAFNLWLQYPELAKDIEKVKHNL----QDKISVDYPDLQAALSKMASNGGKFLRPAFFLL 56

Query: 61  CASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
              L       V+    + +  ++E +H  +LIHDD+  +D+   RRG+ +V  Q+ +  
Sbjct: 57  FTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRGEVSVQSQFGKDI 114

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ AG+ L T  F++I+              + S T    L G L  QM    +      
Sbjct: 115 AVYAGDYLFTVFFDLITDNVLDTPFF----KINSRTMKKILLGELN-QMKHRYNTQQTFL 169

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                   KT  L   A   GA    AS          G+N+GI FQ+ DD+LD 
Sbjct: 170 NYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGISFQILDDILDY 224


>gi|67008257|emb|CAJ00342.1| putative geranylgerannylpyrophosphate synthase [Andrographis
           paniculata]
          Length = 141

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKPT H  Y E  A++AG+ LL +AFE +++    +  N+    +  L+  IG +G+
Sbjct: 1   LRRGKPTNHKVYGEDVAVLAGDALLAFAFEHLATATEDVPTNMVVSAIGELSRCIGAEGL 60

Query: 160 LGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + GQ++DI  E I E     +  I   KT AL+  +   GAI+  A+++E ERLR F   
Sbjct: 61  VAGQVVDICSEGISEVGLELLEFIHLHKTAALLEGSVVLGAILGGATESEVERLRKFARC 120

Query: 217 LGIIFQLADDLLDCE 231
           +G++FQ+ DD+LD  
Sbjct: 121 IGLLFQVVDDILDVT 135


>gi|315305700|ref|ZP_07875309.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL
           F6-596]
 gi|313625931|gb|EFR95454.1| heptaprenyl diphosphate synthase component 2 [Listeria ivanovii FSL
           F6-596]
          Length = 169

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 9/163 (5%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ L    F+I
Sbjct: 1   RAVSIAAALEVLHMATLIHDDV--VDDSPMRRGIPTIHSKYGRNYAVYTGDYLFCICFKI 58

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQKMKTGALM 189
           +SS  + +      + +   + NI    M    QM       +   +       KT  L 
Sbjct: 59  LSSHSSSV------ENIEFNSKNIEKILMGELDQMRTSYKMDVTVREYLSRISGKTAQLF 112

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +C SGA  + AS+    +    G  LG+ FQ+ DD+LD   
Sbjct: 113 ALSCYSGAAGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTS 155


>gi|90962003|ref|YP_535919.1| farnesyl pyrophosphate synthetase / geranyltranstransferase /
           farnesyltransferase / heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius UCC118]
 gi|90821197|gb|ABD99836.1| Farnesyl pyrophosphate synthetase / Geranyltranstransferase /
           Farnesyltransferase / Heptaprenyl diphosphate synthase
           component II [Lactobacillus salivarius UCC118]
          Length = 328

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 16/235 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L  +  E +K I+ +  +L       +   + D   +  + A  GGK +R      
Sbjct: 1   MAFNLWLQYPELAKDIEKVKHNL----QDKISVDYPDLQTALSKMASNGGKFLRPAFFLL 56

Query: 61  CASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
              L       V+    + +  ++E +H  +LIHDD+  +D+   RRG+ +V  Q+ +  
Sbjct: 57  FTKLTADSQNRVDDKKLIDIATSLEVLHMSTLIHDDI--IDDSPKRRGEVSVQSQFGKDI 114

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ AG+ L T  F++I+              + S T    L G L  QM    +      
Sbjct: 115 AVYAGDYLFTVFFDLITDNVLDTPFF----KINSRTMKKILLGELN-QMKHRYNTQQTFL 169

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                   KT  L   A   GA    AS          G+N+GI FQ+ DD+LD 
Sbjct: 170 NYLRNVNGKTAYLFRLASAEGAYFGGASSQTVSLATRIGQNIGISFQILDDILDY 224


>gi|45644728|gb|AAS73116.1| predicted geranylgeranyl pyrophosphate synthase [uncultured marine
           gamma proteobacterium EBAC20E09]
          Length = 314

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 10/181 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GKKIRS L    +S  +  +    ++ + IE +H  +L+HDD+  +DN   RRG  +V+ 
Sbjct: 40  GKKIRSRLNLIASS--SSKNSDRYKLASIIELLHTATLVHDDV--VDNASTRRGAISVNS 95

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +     ++ G+ + + AF ++       K +I ++  L+   N   QG L  Q+  I +
Sbjct: 96  LWSNAHGVLIGDYIYSKAFMLMVEIG---KTDILAE--LADATNDISQGELI-QLDAISN 149

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I   ++  I   KTG L   + ++GA++A A++N  + +    +N+GI+FQ+ DDLLD
Sbjct: 150 IKISLNKLKKISYFKTGRLFEASAKTGAMLAGANKNFIKNISESAKNIGILFQIKDDLLD 209

Query: 230 C 230
            
Sbjct: 210 Y 210


>gi|225685204|gb|EEH23488.1| prenyl transferase [Paracoccidioides brasiliensis Pb03]
          Length = 450

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 242 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALAR 299

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L    LD ++ F  E           +K+ +L+ 
Sbjct: 300 LRDPEVIELVATVIANLIE--GEFMQLRNTELDEENPFFTEEAIAYYLQKTYLKSASLIS 357

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++ H+S    E    +G NLG+ FQL DD+LD     E+L K
Sbjct: 358 KSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGK 406


>gi|62959227|gb|AAY23721.1| farnesyl diphosphate synthase [Microbulbifer sp. JL-463]
          Length = 142

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 5/145 (3%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLPSMD+  +RRGKPT H+ Y E TAI+ G+ L   AFE +++     +    + L  
Sbjct: 1   HDDLPSMDDDSLRRGKPTCHVAYGEATAILVGDALQCSAFEALATLS---EPEFVAPLTR 57

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G +GM+ GQ LDI+ E   ++E Q+  + ++KTGAL+  +    A++A+ +++E
Sbjct: 58  ALARASGSRGMILGQTLDIEAEGSLLNEHQLEQMHRLKTGALIDASVAMPALLANVTKDE 117

Query: 207 KERLRCFGENLGIIFQLADDLLDCE 231
              L  +   LG+ FQ+ DD+LD E
Sbjct: 118 VSALTKYSRALGLAFQIQDDILDVE 142


>gi|253568985|ref|ZP_04846395.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6]
 gi|251841004|gb|EES69085.1| octaprenyl-diphosphate synthase [Bacteroides sp. 1_1_6]
          Length = 324

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 26/235 (11%)

Query: 5   LPSKLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + ++L++     DT L D   LL    +H++ ++              GK +R  LV   
Sbjct: 11  IEAELEDFKALFDTPLSDSNALLDSVITHIRKRN--------------GKMMRPILVLLV 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+  ++   +++AG+
Sbjct: 57  ARLYGAVTPATLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAVFNNKVSVLAGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL  +              + S L   L     L      Q+ ++ +    E   F + 
Sbjct: 115 YLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELL------QLSNVSNHSFSEEVYFDVI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KT AL     E+ A+     + E    R  GE +GI FQ+ DD+ D   D  K
Sbjct: 169 RKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKK 222


>gi|71383196|ref|XP_802138.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70846534|gb|EAN80692.1| farnesyl synthetase, putative [Trypanosoma cruzi]
          Length = 292

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 34/206 (16%)

Query: 50  GKKIRSFLVTECASLF---------------------NVNHLTALRVGAAIECIHCYSLI 88
           GK +R  LV   A                        +      LR+G   E +H  +L+
Sbjct: 11  GKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDDNSSGAIRPFLRLGEITELLHTATLV 70

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  MDN   RRG+PTVH  YD   A++AG+ LL  A   I++          S+++L
Sbjct: 71  HDDV--MDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIAALGH-------SRVVL 121

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEK 207
            ++    L+ +  G+M+ +   F D          KT +L+  +  S A++A       +
Sbjct: 122 LMSTA--LEDLAAGEMMQMDGCF-DIESYEQKSYCKTASLIANSLASTAVLAGLPNTAYE 178

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E    FG++LGI FQ+ DD LD   D
Sbjct: 179 EAAAKFGKHLGIAFQIVDDCLDITGD 204


>gi|254503516|ref|ZP_05115667.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
 gi|222439587|gb|EEE46266.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
          Length = 318

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 11/191 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A +F       + + A++E +H  +L+HDD+  +D   +RRGK    
Sbjct: 37  GGKRLRPMLTLAFADMFGYQGSGHVILAASVEFMHTATLLHDDV--VDESDMRRGKLAAR 94

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ LL  AF+++    +     + +  +LS    I  +G +  Q+   +
Sbjct: 95  KLWGNQASVLVGDYLLGQAFKMMVDTGS-----LEALRILSEASAIIAEGEVL-QLGASK 148

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +    E +   + + KT AL   A E G  +A  +   ++  R +G  LG  FQ+ DD L
Sbjct: 149 NIETTEAEYLRVIEAKTAALFAAAAEVGPEIAGQNDVMRKAARTYGLELGYAFQMVDDAL 208

Query: 229 DC---EEDLPK 236
           D      DL K
Sbjct: 209 DYGGSSADLGK 219


>gi|34541591|ref|NP_906070.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
 gi|34397908|gb|AAQ66969.1| polyprenyl synthetase [Porphyromonas gingivalis W83]
          Length = 292

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  L    A++     + T L     +E IH  +LIHDD+  +D    RRG PT++
Sbjct: 13  GKHVRPLLTGLVAAVCAGKTNSTTLEAAVLLEMIHTATLIHDDV--IDMASTRRGVPTLN 70

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +D   A++ G+ +L+ A       +    ++IR   ++S       +G +  Q     
Sbjct: 71  AFFDNRVAVLMGDFVLSSALM-----RAIALNDIRIITIISRLGRELSEGEIR-QFETAD 124

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              IDE     + + KT  L     E GAI   A     ER++  GE LG  FQ+ DD+ 
Sbjct: 125 KVIIDEDIYMGVIRQKTAMLFSACAEVGAITVQAPVEIVERVKRVGELLGYAFQIRDDIF 184

Query: 229 DCE-EDLPK 236
           D    D+ K
Sbjct: 185 DYYRNDVGK 193


>gi|258676437|gb|ACV87215.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676439|gb|ACV87216.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676441|gb|ACV87217.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676443|gb|ACV87218.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676445|gb|ACV87219.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|322816245|gb|EFZ24624.1| farnesyl synthetase, putative [Trypanosoma cruzi]
          Length = 363

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 34/206 (16%)

Query: 50  GKKIRSFLVTECASLF---------------------NVNHLTALRVGAAIECIHCYSLI 88
           GK +R  LV   A                        +      LR+G   E +H  +L+
Sbjct: 70  GKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDEISSGAIRPFLRLGEITELLHTATLV 129

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  MDN   RRG+PTVH  YD   A++AG+ LL  A   I++          S+++L
Sbjct: 130 HDDV--MDNSNTRRGQPTVHCLYDAKRAVLAGDFLLARASIWIAALGN-------SRVVL 180

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEK 207
            ++    L+ +  G+M+ +   F D          KT +L+  +  S A++A       +
Sbjct: 181 LMSTA--LEDLAAGEMMQMDGCF-DIESYEQKSYCKTASLIANSLASTAVLAGLPNTAYE 237

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E    FG++LGI FQ+ DD LD   D
Sbjct: 238 EAAAKFGKHLGIAFQIVDDCLDITGD 263


>gi|254777013|ref|ZP_05218529.1| GrcC1 [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 335

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 23/225 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + +++   RI+ ++D  L ++A  + T+    L  A      GGK+ R       
Sbjct: 15  DPAFAATVRDGVGRIEQLMDTEL-RSADDIMTELLTHLFKA------GGKRFRPLFTVLS 67

Query: 62  ASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +        + +  A IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG
Sbjct: 68  AQIGPDPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
           + L   A  ++S    +    I                ++ GQM + +            
Sbjct: 126 DYLFATASRLVSRLGPEAVQLI----------AETFAQLVTGQMRETRGRKEGSDPIEHY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             +   KT  L+  A   GA+ + A  ++ ERL   G  +G  FQ
Sbjct: 176 LKVVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQ 220


>gi|298387038|ref|ZP_06996592.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
 gi|298260188|gb|EFI03058.1| polyprenyl synthetase [Bacteroides sp. 1_1_14]
          Length = 324

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 26/235 (11%)

Query: 5   LPSKLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + ++L++     DT L D   LL    +H++ ++              GK +R  LV   
Sbjct: 11  IEAELEDFKALFDTPLSDSNALLDSVITHIRKRN--------------GKMMRPILVLLV 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+  ++   +++AG+
Sbjct: 57  ARLYGAVTPATLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAVFNNKVSVLAGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL  +              + S L   L     L      Q+ ++ +    E   F + 
Sbjct: 115 YLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELL------QLSNVSNHSFSEEVYFDVI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KT AL     E+ A+     + E    R  GE +GI FQ+ DD+ D   D  K
Sbjct: 169 RKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKK 222


>gi|260461762|ref|ZP_05810008.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
 gi|319785307|ref|YP_004144783.1| polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|259032403|gb|EEW33668.1| Polyprenyl synthetase [Mesorhizobium opportunistum WSM2075]
 gi|317171195|gb|ADV14733.1| Polyprenyl synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 332

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 14/224 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
            +Q+ +K ++  L  LL       +      L++A+RYA L GGK+ R+ L     +L +
Sbjct: 36  WMQDGAKGVEQALARLLC-----AEDDGETELMAAMRYATLHGGKRTRALLCLAAGALAD 90

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   VGAAIE IH  +L+HDDLP+MDN  +RRG PTVH+++ E TAI+ G+ L  +
Sbjct: 91  TPAHVLEDVGAAIEMIHACTLVHDDLPAMDNDVLRRGLPTVHVKFGEATAILVGDALQAH 150

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMK 184
           AF  ++S      +  R  L+  L   +  +G  GGQ  D+    + ++  ++  + +MK
Sbjct: 151 AFLTLASLDAPGDN--RIALVRELAQAVSAEGAAGGQAKDLSLVGKHVELDRIVAMHRMK 208

Query: 185 TGALMCFACESGAIMAHASQNEKERLR----CFGENLGIIFQLA 224
           +GAL+  +   GA+ A         L      +    G+  Q+ 
Sbjct: 209 SGALVRASVRMGALCAITEDAAHAALYSALDRYSACFGLALQVV 252


>gi|157887530|emb|CAM98716.1| hypothetical protein [Plasmodiophora brassicae]
          Length = 376

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 21/233 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFN 66
           L   S R+  ++DD++   +  +       LL+++   L   GGK++R  L    A   +
Sbjct: 55  LSRVSDRVSFVIDDVVSSFSGRLP------LLASVSKLLFESGGKRLRPSLCLLMAGALS 108

Query: 67  VNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                         +V    E IH  SL+HDD+  +D    RR  PT ++Q+ +  +I+ 
Sbjct: 109 PARRDPSAAIGPVDKVAQISEMIHVASLLHDDV--LDGATTRRNTPTANVQFGDKASILG 166

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL+ +  I++S  +    ++ + ++  L     +Q     + +++            
Sbjct: 167 GDFLLSRSSIILASLGSCEAVSLMATIISDLVSGEIMQM----RPMNVGSLSDRLEYYLS 222

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               KT +LM  +C + A++   S + +     FG+ LG+ FQL DDLLD   
Sbjct: 223 KSYRKTASLMANSCRTVAVIDDLSSDLQNAAMDFGKYLGLCFQLTDDLLDITG 275


>gi|321470026|gb|EFX81004.1| hypothetical protein DAPPUDRAFT_318059 [Daphnia pulex]
          Length = 391

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 17/218 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN--------HLTALR 74
           L      + ++    L+   +Y   G GK IR  +    A   N +            ++
Sbjct: 81  LYDDIRELLSKTQATLVPIAQYYFDGKGKAIRPVITLLMAKAINYHLGENSRNVVEKQMK 140

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +   +E IH  SL+HDD+  +D    RR K +V+  + +  +I+AGN ++  + EI ++ 
Sbjct: 141 IAQIVEMIHTASLVHDDV--VDAADSRRNKSSVNKVWGQKKSILAGNYVVGRSIEICTAI 198

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           ++    N+ +++   L     +      Q+    ++             KT +L+   C+
Sbjct: 199 ESHEVLNLITKIFSELISGELM------QLDGTANKEEWFDHYLEKTFKKTASLIANGCQ 252

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +++A AS   +     FG  LG+ FQL DDLLD   
Sbjct: 253 AVSVVAGASSATQTNAFQFGRQLGMAFQLVDDLLDFVS 290


>gi|289613953|emb|CBI59187.1| unnamed protein product [Sordaria macrospora]
          Length = 444

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 72/267 (26%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS--------------------------- 63
           + + H     +A  Y    GK +R  +V   +                            
Sbjct: 95  LGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATALCPKAPQRQQSTLQASAAIDTSIS 154

Query: 64  ----LFNVNHLTALRV-----------------GAAIECIHCYSLIHDDLPSMDNGYIRR 102
               L + N   A                        E IH  SL+HDD+  +D+   RR
Sbjct: 155 PLNILSDFNPSAATPASETTPADTDILPSQRRLAEITELIHTASLLHDDV--IDHSESRR 212

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P+ ++++    A++AG+ LL  A   ++  +      + + ++           ++ G
Sbjct: 213 GAPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVVELLATVIA---------NLVEG 263

Query: 163 QMLDIQDEFIDE----------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           + + +++   DE          T       +KT +L+  +C + A++  A     +    
Sbjct: 264 EFMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGGADAATVDAAYL 323

Query: 213 FGENLGIIFQLADDLLDC---EEDLPK 236
           +G+NLG+ FQL DD+LD    E++L K
Sbjct: 324 YGKNLGLAFQLVDDMLDYTRSEKELGK 350


>gi|166154843|ref|YP_001654961.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu]
 gi|166155718|ref|YP_001653973.1| dimethylallyltransferase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336124|ref|ZP_07224368.1| dimethylallyltransferase [Chlamydia trachomatis L2tet1]
 gi|165930831|emb|CAP04329.1| dimethylallyltransferase [Chlamydia trachomatis 434/Bu]
 gi|165931706|emb|CAP07283.1| dimethylallyltransferase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 291

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/236 (31%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTECASLFN 66
                  +++  L D L    +         L   I YALLGG K++R  LV   A   +
Sbjct: 3   YFSVYRSKVEKKLRDSLGDFGN-----TQGGLRDPIEYALLGGGKRVRPLLVGLFAEGIH 57

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 L    AIE IH  +LI DDLP MD+  +RRGKP+VH  +DE +A++A   L+  
Sbjct: 58  KERD-VLDTAIAIEYIHTSTLIADDLPCMDDDDMRRGKPSVHKAFDEASALLASYALIPA 116

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHN---------IGLQGMLGGQMLDIQDEFIDETQV 177
           A+  I      LK  +  +  +   +           G+ G+LGGQ  D+      +  V
Sbjct: 117 AYARIRKNAKALKAVVSCEQDVEEAYEDILELIELRFGVGGILGGQYEDVFFHDFSKENV 176

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             I K KTGAL   AC SG +     +     +  F E+ G++FQ+ DDL D  +D
Sbjct: 177 LGIIKKKTGALFEIACVSGWLFGGGERESSTLVAEFAEHFGLLFQIRDDLADLSQD 232


>gi|172040899|ref|YP_001800613.1| putative polyprenyl diphosphate synthase [Corynebacterium
           urealyticum DSM 7109]
 gi|171852203|emb|CAQ05179.1| putative polyprenyl diphosphate synthase [Corynebacterium
           urealyticum DSM 7109]
          Length = 394

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 101/268 (37%), Gaps = 47/268 (17%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVT 59
            L + L++    +D  LD     +A+       +    A+     + + GGK++R     
Sbjct: 26  DLRAPLKDVPAAVDRALDAYFDHSAAEFSAIAPE-FNDAMAVLRGFVMGGGKRVRPTFAW 84

Query: 60  ECASLF------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
                             +V+  + L   +A+E +   +LIHDD+  +D    RRG PT 
Sbjct: 85  AGFRAGLEGGGADGSSIQDVDPASVLLALSALEFVQACALIHDDI--IDESDTRRGNPTT 142

Query: 108 HIQ----------------YDEVTAIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLMLS 149
           H                  Y    AI+AG+  L++A +++++      + D +R      
Sbjct: 143 HRVFESQHRERGWFGSSEHYGISQAILAGDLALSWADDLLATAGLSPSIVDRVRGPWRAM 202

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQN 205
            T       +L GQ LDI  E      +     +   KT    +      GA +A A + 
Sbjct: 203 RTE------VLAGQQLDIALENNGSESIADAMQVINFKTASYTVARPLHIGAALAGADER 256

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
             E L  +G  +G  FQL DD L    D
Sbjct: 257 TIELLLEYGTLVGQAFQLRDDQLGVFGD 284


>gi|302833229|ref|XP_002948178.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f.
           nagariensis]
 gi|300266398|gb|EFJ50585.1| hypothetical protein VOLCADRAFT_88541 [Volvox carteri f.
           nagariensis]
          Length = 403

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 95/247 (38%), Gaps = 44/247 (17%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTECASLFNVN---------- 68
           +++ +   H  +     L +A  Y     + GK++R  LV   +S  +            
Sbjct: 58  EIVSERLRHSVSTGIPALKTAAEYFFRHGMEGKRLRPSLVLLMSSALSPAVPPPEYLQVD 117

Query: 69  -----------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                           R+    E IH  SL+HDD+  +D+   RRG  +++      TAI
Sbjct: 118 LRPAAEHAPELRRRQQRIAEIAELIHVASLLHDDV--IDDAETRRGVVSLNNVMGNKTAI 175

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           +AG+ LL  A   +++ +      + SQ++  L     +      QM    ++ +D    
Sbjct: 176 LAGDFLLARASVSLAALRNSETVVLMSQVLEHLVSGEIM------QMTATSEQLLDLDHY 229

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEK------------ERLRCFGENLGIIFQLAD 225
                 KT +LM  +  S A++A                   +    +G +LG+ FQ+ D
Sbjct: 230 LAKTYCKTASLMANSSRSIAVLAGVPPEHVCGAVCGSGDVVCDMAWSYGRHLGLAFQVVD 289

Query: 226 DLLDCEE 232
           DLLD   
Sbjct: 290 DLLDLTG 296


>gi|332639921|pdb|3RMG|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Bacteroides Thetaiotaomicron
 gi|332639922|pdb|3RMG|B Chain B, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Bacteroides Thetaiotaomicron
          Length = 334

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 26/235 (11%)

Query: 5   LPSKLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + ++L++     DT L D   LL    +H++ ++              GK +R  LV   
Sbjct: 13  IEAELEDFKALFDTPLSDSNALLDSVITHIRKRN--------------GKMMRPILVLLV 58

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+  ++   +++AG+
Sbjct: 59  ARLYGAVTPATLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVSVLAGD 116

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL  +              + S L   L     L      Q+ ++ +    E   F + 
Sbjct: 117 YLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELL------QLSNVSNHSFSEEVYFDVI 170

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KT AL     E+ A+     + E    R  GE +GI FQ+ DD+ D   D  K
Sbjct: 171 RKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKK 224


>gi|331697463|ref|YP_004333702.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190]
 gi|326952152|gb|AEA25849.1| Dimethylallyltranstransferase [Pseudonocardia dioxanivorans CB1190]
          Length = 356

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 11/190 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A+         +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 71  GGKAVRPALALLSAAAAGAGVEVGVPGAVAVELVHNFSLLHDDL--MDGDTERRHRTTVW 128

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +Q+   +AI+ G+ +L  A E++    +            +    +  + ++ GQ  D+ 
Sbjct: 129 VQWGASSAILCGDAMLALAQEVLLEAPSPHAAP------AARLLAVTTRELIRGQAEDLA 182

Query: 169 DEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E  D+    +   +   KTG+L+  +   GA++A A   + E L  +G  +G+ FQL D
Sbjct: 183 FESRDDVGVDECLSMAAGKTGSLLAASASIGAVLAGAPAAQTEALHTYGHEVGMAFQLVD 242

Query: 226 DLLDCEEDLP 235
           DLL    D  
Sbjct: 243 DLLGIWGDPG 252


>gi|296168327|ref|ZP_06850251.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896758|gb|EFG76391.1| trans-hexaprenyltranstransferase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 332

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 16/223 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + G  + +++   RI+ ++D  L  +A  + T     L  A      GGK+ R       
Sbjct: 9   DPGFAATVRDGVGRIEQLMDTELC-SADEVMTDSLTHLFKA------GGKRFRPLFTVLS 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +  N +       GA IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG
Sbjct: 62  AQIGPNPDAHEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGAPTANVRWGNNVAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFM 179
           + L   A  ++S    +       +L+      +    M   + L    E  D       
Sbjct: 120 DYLFATASRLVSLLGPEA-----VRLIAETFAQLVTGQMRETRGLTGAAEGADPVEHYLK 174

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +   KT  L+  A   GA+ + A   + ERL   G  +G  FQ
Sbjct: 175 VVYEKTACLIAAAGRFGAMFSGADAEQVERLSRLGGIVGTAFQ 217


>gi|291277470|ref|YP_003517242.1| polyprenyl synthetase [Helicobacter mustelae 12198]
 gi|290964664|emb|CBG40519.1| polyprenyl synthetase [Helicobacter mustelae 12198]
          Length = 298

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 27/231 (11%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +++  + +   + D + +  S       + +L   ++ L  GK +RS L+   A     N
Sbjct: 1   MEQKLELVQKQIADYIKELES-------EEILDFCKH-LQNGKMLRSRLILAIA----PN 48

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           H   +++ A +E I   SL+HDD+  +D+  +RRG P+++  +    +I+ G+   + AF
Sbjct: 49  HPDVIKLCAIVEMIQNASLLHDDV--IDDSLLRRGNPSINALFGNKNSIMLGDVFYSKAF 106

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             +     ++  +I S  ++ L+       M+       +    D  +   + + KT +L
Sbjct: 107 FELLDLDKRITKSI-SDCVVRLSRGEISDVMMS------RAFQPDFLKYLNMIEDKTASL 159

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           +  +  S +I+A+      ++   +G NLGI FQ+ DDLLD   D   L K
Sbjct: 160 VASSAMSASILANLD---VKKHYNYGLNLGIAFQIVDDLLDVFGDDKTLGK 207


>gi|146166126|ref|XP_001015938.2| Polyprenyl synthetase family protein [Tetrahymena thermophila]
 gi|146145326|gb|EAR95693.2| Polyprenyl synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 424

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 9/196 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK+ R  L    A  FN+       + +  E +H  +L+ DD+   DN  +RR K  V
Sbjct: 129 RGGKRWRPILCIILAEAFNLGQEDVKEIASLCEIVHNGTLVVDDIE--DNSTVRRDKKCV 186

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H+ Y    +I AGN +      I+        D  + +        +    +  G  +  
Sbjct: 187 HLIYGVDISINAGNMMYFAPLHILLKSNKY-TDQQKLRFAKIYAEEMTQLHLGQGWDILW 245

Query: 168 QDEFI------DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +          E Q   +   KTG L   +        + S  ++  +  F E +G+ F
Sbjct: 246 HNTDKLEGRIPTEQQYLQMTAHKTGVLARLSSRLICAAVNTSVEDEMTISRFSERIGVAF 305

Query: 222 QLADDLLDCEEDLPKK 237
           Q+ DD+L+ E +  KK
Sbjct: 306 QIQDDILNLEGEEYKK 321


>gi|316935308|ref|YP_004110290.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
 gi|315603022|gb|ADU45557.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
          Length = 288

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 13/211 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL 73
           RI+  L + L Q           RL +A+R A+   G ++R  L    A     ++    
Sbjct: 6   RIERALTEALNQADM---AGCPPRLAAAMRGAVFPRGARVRPRLCHSVALACGEDNPGIT 62

Query: 74  RVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               AA+E +HC SLIHDDLP  D   +RRG+P+VH  + E  A++AG+ ++  AF+ I+
Sbjct: 63  EAAGAALELMHCASLIHDDLPCFDGADLRRGRPSVHKAFGEPLAVLAGDAMIVLAFQTIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                    ++   ++     +   G++ GQ  + +     E  +    + KTGAL   A
Sbjct: 123 RVDGPADRLLKLTQIIGSAVGV-PFGIVAGQAWECE----SEINLAHYHRSKTGALFVAA 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQL 223
              GA  A +     E  R  GE +G  +Q+
Sbjct: 178 TAMGAASAGSDP---EPWRMVGEKIGEAYQV 205


>gi|29348670|ref|NP_812173.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340575|gb|AAO78367.1| octaprenyl-diphosphate synthase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 324

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 26/235 (11%)

Query: 5   LPSKLQENSKRIDTILDD---LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + ++L++     DT L D   LL    +H++ ++              GK +R  LV   
Sbjct: 11  IEAELEDFKALFDTPLSDSNALLDSVITHIRKRN--------------GKMMRPILVLLV 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A L+       L    ++E +H  SL+HDD+  +D    RRG+ +V+  ++   +++AG+
Sbjct: 57  ARLYGAVTPATLHAAVSLELLHTASLVHDDV--VDESTERRGQLSVNAIFNNKVSVLAGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL  +              + S L   L     L      Q+ ++ +    E   F + 
Sbjct: 115 YLLATSLVHAEQTNNYEIIRLVSSLGQKLAEGELL------QLSNVSNHSFSEEVYFDVI 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KT AL     E+ A+     + E    R  GE +GI FQ+ DD+ D   D  K
Sbjct: 169 RKKTAALFAACAEAAALSVQVGEEEVAFARLLGEYIGICFQIKDDIFDYF-DSKK 222


>gi|71403571|ref|XP_804573.1| farnesyl synthetase [Trypanosoma cruzi strain CL Brener]
 gi|14582479|gb|AAK69519.1|AF282771_1 solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|70867614|gb|EAN82722.1| farnesyl synthetase, putative [Trypanosoma cruzi]
 gi|258676433|gb|ACV87213.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
 gi|258676435|gb|ACV87214.1| solanesyl diphosphate synthase [Trypanosoma cruzi]
          Length = 363

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 34/206 (16%)

Query: 50  GKKIRSFLVTECASLF---------------------NVNHLTALRVGAAIECIHCYSLI 88
           GK +R  LV   A                        +      LR+G   E +H  +L+
Sbjct: 70  GKMLRPTLVAMMAHALLPPHVSEQIRAESIGSIDDISSGAIRPFLRLGEITELLHTATLV 129

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  MDN   RRG+PTVH  YD   A++AG+ LL  A   I++          S+++L
Sbjct: 130 HDDV--MDNSNTRRGQPTVHCLYDTKRAVLAGDFLLARASIWIAALGH-------SRVVL 180

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEK 207
            ++    L+ +  G+M+ +   F D          KT +L+  +  S A++A       +
Sbjct: 181 LMSTA--LEDLAAGEMMQMDGCF-DIESYEQKSYCKTASLIANSLASTAVLAGLPNTAYE 237

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           E    FG++LGI FQ+ DD LD   D
Sbjct: 238 EAAAKFGKHLGIAFQIVDDCLDITGD 263


>gi|297171036|gb|ADI22050.1| geranylgeranyl pyrophosphate synthase [uncultured myxobacterium
           HF0200_05J13]
          Length = 339

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 90/234 (38%), Gaps = 9/234 (3%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L ++L E    +   L  L  +  + +    +    +A+    L GK++R   V   A
Sbjct: 11  DTLTARLIEIRTWLQDDLATLEREIIAPLPEVTDLGQRAAVHLLGLPGKRVRPLCVVLAA 70

Query: 63  SLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                    A++ +  A E +H  +L+HDD+  +D G  RRG     + Y    +++ G+
Sbjct: 71  RAGGAPFNEAVKQLAIACELVHSATLLHDDV--LDEGSERRGAVAARLAYGNSASVLGGD 128

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            LL  A   +         +    ++  +      Q    G+         D      I 
Sbjct: 129 YLLVDALRRVYKTGEHGLLSDLMDVIDGMVKAEVAQLERRGKF------DADRDAYLEII 182

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             KT A+  +   +G I    S+   + L  +G  +G+ FQ+ DD+LD   +  
Sbjct: 183 YGKTAAIFEWGLRAGGIAGGLSEEAAQGLGKYGAAIGMAFQVVDDILDLAGESE 236


>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
          Length = 205

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 5/145 (3%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT HI Y E  A++AG+ LL+++FE I++    +  +   + +  L   IG 
Sbjct: 1   NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGS 60

Query: 157 QGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++D+  E  D     +  I   KT AL+  +   GAIM   S  E E+LR F 
Sbjct: 61  EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
            ++G++FQ+ DD+LD     E+L K
Sbjct: 121 RSIGLLFQVVDDILDVTKSSEELGK 145


>gi|9711345|dbj|BAB07816.1| geranyl geranyl diphosphate synthase [Kitasatospora griseola]
          Length = 348

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 12/187 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR+ L    A     +   A+    A+E +H +SL+HDD+  MD    RRG+PTV  
Sbjct: 65  GKMIRAALTVLAAEACGGDVQRAVCGAVAVELVHNFSLLHDDV--MDGDLERRGRPTVWA 122

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 AI+AG+ LL     I+             +   +      +  +  GQM D+  
Sbjct: 123 TLGVPAAILAGDVLLARGCAILEGDSEH-------RTWATELLTETIATLAEGQMADVAF 175

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E    I   +   + + KT AL+  ACE GA ++      +ERL  FG +LG+ FQL DD
Sbjct: 176 EHRTTISLEEALAVSEAKTAALLSCACELGAGLSGGGAEARERLAKFGWHLGMAFQLVDD 235

Query: 227 LLDCEED 233
           +L    D
Sbjct: 236 VLGIWGD 242


>gi|218530905|ref|YP_002421721.1| polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
 gi|218523208|gb|ACK83793.1| Polyprenyl synthetase [Methylobacterium chloromethanicum CM4]
          Length = 288

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/231 (31%), Positives = 110/231 (47%), Gaps = 15/231 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
           +  +RI+T+LD   +  +          L  AIRYA+  GG +IR  L    A     + 
Sbjct: 2   DVGRRIETVLD---IAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVALACGDDD 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             T+    AAIE +HC SL+HDDLP  D+  +RR KP+VH  +    A++ G+ L+  AF
Sbjct: 59  PATSEAAAAAIELLHCASLVHDDLPCFDDAAMRRQKPSVHAAFGVPLAVLTGDALIVAAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E ++   T     +   + L         G++ GQ  + +  ++D  +       KTGAL
Sbjct: 119 ETLARGVTCSPTRLAGLVGLIARAAGSPSGIVAGQAWESE-PYVDLVEYQQA---KTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
              A  +GA  A A        R  GE LG  +Q+ADDL D    +E++ K
Sbjct: 175 FAAATVAGAAAAGAPP---LPWRLLGECLGAAYQVADDLRDVACRQEEIGK 222


>gi|196228124|ref|ZP_03126991.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428]
 gi|196227527|gb|EDY22030.1| protein of unknown function DUF116 [Chthoniobacter flavus Ellin428]
          Length = 590

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 14/216 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR----- 74
           LD ++       +      L  A       GK+ R FL               +      
Sbjct: 249 LDSIMGPAEGETEKISRQWLGRA-------GKRWRPFLTVAAYQALRTTPGAPIPDDLRK 301

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           V  A+EC H  SLIHDD+   DN   R G+PT+H ++    A+  G+ L+   + ++++ 
Sbjct: 302 VAVAVECFHKASLIHDDIE--DNDAQRYGEPTLHEEHGIAVALNVGDLLIGEGYRLLAAC 359

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
               +  +    + +       +G     +   Q + +  T+V  I + KT      A +
Sbjct: 360 NASPEQKVAMLRIAAEGQRELCRGQGAELVWARQPQPLTSTEVLDIFRKKTAPAFGVALQ 419

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            G + A   +  +E L+ + E LGI +Q+ DDL D 
Sbjct: 420 LGTVYAGQLEEHEEVLQAYSEALGIAYQIRDDLSDL 455


>gi|323448786|gb|EGB04680.1| hypothetical protein AURANDRAFT_55083 [Aureococcus anophagefferens]
          Length = 341

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 11/190 (5%)

Query: 53  IRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           IR+ +V   A        +++   ++   IE +H  SL HDD+  +D    RRG P+V  
Sbjct: 141 IRATMVLLTARALRKQGSSNMRQRKLAEIIEIVHTASLFHDDV--IDGADTRRGCPSVSA 198

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++ +  AI+AG+ LL  A   ++  +      + S ++  L     +Q        D   
Sbjct: 199 KFGDKVAILAGDFLLARACVALAKLENLAVVELISVVIEHLVRGEIIQMRPESGTSDTHA 258

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                         KTG+LM  AC + A++   +Q   +    +G ++G+ FQL DD+LD
Sbjct: 259 L---LEAYLQKTFYKTGSLMANACRAAALLEDETQANCDAAFAYGRHVGLAFQLVDDILD 315

Query: 230 CEE---DLPK 236
            E    +L K
Sbjct: 316 FEASDLELGK 325


>gi|227431314|ref|ZP_03913367.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352907|gb|EEJ43080.1| trans-hexaprenyltranstransferase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 332

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 17/230 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           K+ +    ++  L ++L++ +   +   ++ + +AIR     GK +R  L    + L + 
Sbjct: 8   KIWDTFPELNPPLQNVLIEMSESWRIGFSE-IDNAIRSQASAGKLVRPALTLLFSELTDA 66

Query: 68  NH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A+ +GA+IE +H  +LIHDD+  +D   +RRG+ ++   + + TA+ AG+ LLT 
Sbjct: 67  PYNQKAIVLGASIELLHLATLIHDDI--IDESKLRRGQDSIQAHFGKDTAVYAGDYLLTG 124

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKM 183
              +++       + +  +          L+ +L G++    + ++ +T           
Sbjct: 125 MLSLLNDADNIQANKLALE---------ALRNILFGELTQKHNRYLTDTSFDNCLTQITG 175

Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT AL   +   GA  +   S    + +   GENLGI FQL DD LD E 
Sbjct: 176 KTAALFKLSVLFGATSSDGVSSQLLDVVGKLGENLGIAFQLLDDYLDFES 225


>gi|315644722|ref|ZP_07897852.1| Polyprenyl synthetase [Paenibacillus vortex V453]
 gi|315279872|gb|EFU43172.1| Polyprenyl synthetase [Paenibacillus vortex V453]
          Length = 334

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 13/224 (5%)

Query: 20  LDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASL-FNVNHLTALRVG 76
            D LL +     +        L S +     GGK++R  +V   +    + +    ++  
Sbjct: 14  FDRLLREVVISDRDLSPPSVVLESVVNLINSGGKRLRPLMVMLGSRFGVSGHESAVMKTA 73

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             +E +H  SL+HDD+  +D   +RRG PT+H   D  TA+  GN ++  A E  +    
Sbjct: 74  VLLEYLHMASLVHDDI--IDQSDMRRGMPTLHETTDVQTAVHIGNYMIARAIEWAAGHPG 131

Query: 137 QLKDNIRSQLMLSLTH-----NIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGAL 188
           +  D     +     +        +  +  G   Q+    +  +   Q     + KT  L
Sbjct: 132 EESDGASEAVSEEDAYRLAELAALVTELCMGEYDQLHHRFNYDLTMEQYLEKTRCKTALL 191

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           M    ++GA  A A     E L  FGE LG+ FQ+ DDLLD  +
Sbjct: 192 MAHCLKAGAEAAKADARTAELLFQFGEALGMAFQIRDDLLDFTQ 235


>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
          Length = 304

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 64/241 (26%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
                 ++E +  ID  LD         +  Q+ + +  ++RY+LL G            
Sbjct: 61  FDFQQYMKERATLIDAALD-------KSVPLQYPEIINESMRYSLLAG------------ 101

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                                                 RRGKPT H  Y E  AI+AG+ 
Sbjct: 102 --------------------------------------RRGKPTNHKVYGEEIAILAGDA 123

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVF 178
           LL+ +FE I+     +  +   Q+++ +   +G +G++ GQ +DI+ E   E      + 
Sbjct: 124 LLSLSFEYIARETRGVAADRVLQVIVEVGKAVGSEGLVAGQAVDIKSEGAGESVGLDTLQ 183

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLP 235
            I + KT  L+  A  SGAI+  A++ + +RLR +  ++G+ FQ+ DD+LD     E+L 
Sbjct: 184 YIHEHKTAVLLEAAVVSGAILGGATEVDVDRLRKYSRSIGLAFQVVDDILDITATTEELG 243

Query: 236 K 236
           K
Sbjct: 244 K 244


>gi|118463064|ref|YP_883710.1| polyprenyl synthetase [Mycobacterium avium 104]
 gi|118164351|gb|ABK65248.1| polyprenyl synthetase [Mycobacterium avium 104]
          Length = 325

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 23/225 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + +++   RI+ ++D  L ++A  + T+    L  A      GGK+ R       
Sbjct: 5   DPAFAATVRDGVGRIEQLMDTEL-RSADDIMTELLTHLFKA------GGKRFRPLFTVLS 57

Query: 62  ASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +        + +  A IE +H  +L HDD+  MD   +RRG PT ++++    AI+AG
Sbjct: 58  AQIGPDPDAAEVTIAGAVIELVHLATLYHDDV--MDEAEVRRGTPTANVRWGNNVAILAG 115

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
           + L   A  ++S    +    I                ++ GQM + +            
Sbjct: 116 DYLFATASRLVSRLGPEAVQLI----------AETFAQLVTGQMRETRGRKEGSDPIEHY 165

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             +   KT  L+  A   GA+ + A  ++ ERL   G  +G  FQ
Sbjct: 166 LKVVYEKTACLIAAAGRFGAMFSGADADQVERLSRLGGIVGTAFQ 210


>gi|303282127|ref|XP_003060355.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457826|gb|EEH55124.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 311

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 15/207 (7%)

Query: 33  TQHNDRLLSAIRYAL---LGGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCY 85
           T     L +A  Y       GK++R  ++   AS              R+    E IH  
Sbjct: 6   TSEVPALATAAEYFFKVGAEGKRMRPTVLLLMASALTNEPGDVRRRQQRLAEITELIHVA 65

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDD+  +D+   RRG   ++++     AI+AG+ LL  A   ++S +      + S+
Sbjct: 66  SLLHDDV--LDHAATRRGLRALNLEVGNKLAILAGDFLLARASVTLASLRNTEVIALLSR 123

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++  L     +      QM    D        F     KT +L+  + ++  ++      
Sbjct: 124 VLEHLVTGEVM------QMTAKADRLTSFDHYFQKTYFKTASLIANSAKAIVLLGGHDVT 177

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
             E    +G +LG+ FQ  DD+LD   
Sbjct: 178 TAESAYQYGRHLGLAFQFQDDVLDFTG 204


>gi|254434422|ref|ZP_05047930.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27]
 gi|207090755|gb|EDZ68026.1| polyprenyl synthetase family [Nitrosococcus oceani AFC27]
          Length = 346

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 12/232 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
              S  +E   R+D  L+  +    S + +Q  + +   I+     GK+IR  LV     
Sbjct: 17  DFFSYWKETRTRLDQELNCQIPVLFSALGSQQIETIQQIIK----NGKRIRGCLVFLMNQ 72

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   AL    AIECI   SLIHDD   +D   IRR +P          A++ G+ +
Sbjct: 73  TQEGKLEDALPRAVAIECIQAASLIHDD--YLDEDVIRRKRPATWTVEGPRRAVLLGDIM 130

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMI 180
              A + ++         + ++ + ++ +  G    L  Q    +    + +++     I
Sbjct: 131 FATAIQSMAELSKDDGATV-ARAIATVAN--GAYQELFWQTKTRERRLHKLLEKNLYDHI 187

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +KTGAL   AC+ GAI A A +        FG   G  +Q+ADDL D   
Sbjct: 188 IYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAYQIADDLEDFIA 239


>gi|259486315|tpe|CBF84055.1| TPA: hexaprenyl pyrophosphate synthetase Coq1, putative
           (AFU_orthologue; AFUA_3G06120) [Aspergillus nidulans
           FGSC A4]
          Length = 456

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 7/161 (4%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + +I++    A++AG+ LL  A   ++ 
Sbjct: 198 RLAEITELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALAR 255

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    +           +KT +L+ 
Sbjct: 256 LRDPEVTELLATVIANLVE--GEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLIS 313

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +C + A++ H++ +  E    +G NLG+ FQL DD+LD  
Sbjct: 314 KSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYT 354


>gi|261331244|emb|CBH14234.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 359

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 38/233 (16%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF---------------------NVN 68
           +  + N+ L  A +Y L  GGK +R  LV   A                        +  
Sbjct: 46  VANKENEVLDYAGKYVLSSGGKLLRPTLVAMMAHALVPPHMSQQFQASDIGSLDDIPSGT 105

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               LR+G   E IH  +L+HDD+  +D+  +RRGKP +H  +D   A++AG+ LL  A 
Sbjct: 106 IRPFLRLGEVTELIHTAALVHDDV--IDDSEMRRGKPALHCVHDVKRAVLAGDFLLARAS 163

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             I+S         R  ++++      L+ +  G+M+ ++  F D  +       KTG+L
Sbjct: 164 LWIASLCVP-----RIVVLMTTA----LEDLTRGEMMQMEGCF-DLERYEEKTYCKTGSL 213

Query: 189 MCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +  +  + A++A  S +  E     +G  LGI FQ+ DD LD   D   L K+
Sbjct: 214 IANSLAATAVLADPSNSAHEVAAGEYGRRLGIAFQIVDDCLDITGDEKNLGKR 266


>gi|121998392|ref|YP_001003179.1| polyprenyl synthetase [Halorhodospira halophila SL1]
 gi|121589797|gb|ABM62377.1| farnesyl-diphosphate synthase [Halorhodospira halophila SL1]
          Length = 291

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 12/225 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E SKRI++ L+      A         +L  A+R+A+  GG ++R  L    A+    +H
Sbjct: 2   EPSKRIESALE---AAVARATAAPAPPQLAHAVRHAVFAGGARVRPRLCLTVAAACGDDH 58

Query: 70  -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     AIE +HC SL+HDDLP  D+   RRG+P+VH  Y E  A++AG+ L+ +A 
Sbjct: 59  PELADAAATAIELMHCASLVHDDLPCFDDAATRRGQPSVHAAYGERLAVLAGDALIVHAL 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           E ++             L+ ++T   G+  G+  GQ  + + E      V    + KTG+
Sbjct: 119 ETLA-LTVPQAPQRAGALLTTVTRATGMPYGITAGQAWESEPEIP----VAEYHQAKTGS 173

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A  +   +A  ++++ +R R  GE LG  +Q+ADDL D   
Sbjct: 174 LFAAATVA-GAIAAGAEDQADRWRIVGERLGEAYQVADDLRDAVG 217


>gi|124026920|ref|YP_001012240.1| geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus
           DSM 5456]
 gi|123977614|gb|ABM79895.1| Geranylgeranyl pyrophosphate synthase, IspA [Hyperthermus butylicus
           DSM 5456]
          Length = 312

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 13/221 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L E+ K++ +++DD + Q  + +   H  R+     Y   GGK+ R FLV E A      
Sbjct: 11  LVEHWKKLRSLVDDAIKQWIARLPEAHAVRVAE---YIARGGKRFRGFLVLEIARSLGGR 67

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL    A+E IH  SL  DD+  +D    RRG+    ++Y     ++    L+T+A 
Sbjct: 68  IEDALDAAVAVELIHASSLALDDI--IDEDVERRGQKAAWVEYGVKKTVMTVYLLVTFAH 125

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +I+       +   R+            +G +     D     +         K+KT +L
Sbjct: 126 KIVEE-----RYGFRATSRTITATLNISRGEVLDAFTDPDS--LPPEYYLETVKLKTASL 178

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              A E GAI+A       E    +GE LG+++Q+ADD++D
Sbjct: 179 FRLAGELGAIVAGREDLYGEA-GLYGEYLGLMYQVADDIVD 218


>gi|319443460|pdb|3APZ|A Chain A, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl
           Pyrophosphate Synthase
 gi|319443461|pdb|3APZ|B Chain B, Apo Form Of Arabidopsis MediumLONG-Chain Length Prenyl
           Pyrophosphate Synthase
          Length = 348

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 30/248 (12%)

Query: 7   SKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTEC 61
           S ++E       + D+L  L      M      +L SA  Y     + GK+ RS ++   
Sbjct: 2   SLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLM 61

Query: 62  ASLFNVNHLTALR-----------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           A+  +V    AL                  +    E IH  SL+HDD+  +D+   RRG 
Sbjct: 62  ATALDVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV--LDDADTRRGV 119

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++++      +++AG+ LL+ A   +++ K      + +  +  L     +      ++
Sbjct: 120 GSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETM------EI 173

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               ++             KT +L+  +C++ A++   +         +G NLG+ FQL 
Sbjct: 174 TSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLI 233

Query: 225 DDLLDCEE 232
           DD+LD   
Sbjct: 234 DDILDFTG 241


>gi|227876918|ref|ZP_03995014.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01]
 gi|256843741|ref|ZP_05549229.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256850189|ref|ZP_05555619.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047813|ref|ZP_06020763.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293379832|ref|ZP_06625954.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
 gi|312978109|ref|ZP_07789854.1| polyprenyl synthetase family protein [Lactobacillus crispatus
           CTV-05]
 gi|227863475|gb|EEJ70898.1| trans-hexaprenyltranstransferase [Lactobacillus crispatus JV-V01]
 gi|256615161|gb|EEU20362.1| polyprenyl synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713161|gb|EEU28152.1| polyprenyl synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260571870|gb|EEX28441.1| polyprenyl synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290923604|gb|EFE00485.1| polyprenyl synthetase [Lactobacillus crispatus 214-1]
 gi|310895084|gb|EFQ44153.1| polyprenyl synthetase family protein [Lactobacillus crispatus
           CTV-05]
          Length = 329

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 13/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN   P    +    I   L+++     + ++T ++D   + +  A  GGK +R  L+  
Sbjct: 1   MNNSQP---WQKYPLIRKPLEEVNQLIQATIRTPYSDLQDALLEMASNGGKYLRPSLLIL 57

Query: 61  CASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            A + +         +++ ++IE +H  SLIH     +D+   RRGK ++  ++ + TA+
Sbjct: 58  SAQIASKKETVSKQIIQLASSIEILHMASLIH--DDIIDDSDERRGKISIQARFGKDTAV 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            AG+ L T+ F++I +  ++    I++   +       L     GQM +  +   D    
Sbjct: 116 YAGDLLFTHFFDLILNAISEQDYMIKNAHTMHHLLAGEL-----GQMAERFNLSQDFNDY 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               K KT AL   A E G+   +  +   + L  FGENLGI FQ+ DD+LD   
Sbjct: 171 LTNVKGKTAALFRLAAEEGSHFGNGDEQTTQALASFGENLGIAFQIVDDILDYTG 225


>gi|71744686|ref|XP_826973.1| farnesyl pyrophosphate synthetase [Trypanosoma brucei TREU927]
 gi|70831138|gb|EAN76643.1| farnesyl pyrophosphate synthetase, putative [Trypanosoma brucei]
          Length = 359

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 38/233 (16%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLF---------------------NVN 68
           +  + N+ L  A +Y L  GGK +R  LV   A                        +  
Sbjct: 46  VANKENEVLDYAGKYVLSSGGKLLRPTLVAMMAHALVPPHMSQQFQASDIGSLDDIPSGT 105

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               LR+G   E IH  +L+HDD+  +D+  +RRGKP +H  +D   A++AG+ LL  A 
Sbjct: 106 IRPFLRLGEVTELIHTAALVHDDV--IDDSEMRRGKPALHCVHDVKRAVLAGDFLLARAS 163

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             I+S         R  ++++      L+ +  G+M+ ++  F D  +       KTG+L
Sbjct: 164 LWIASLCVP-----RIVVLMTTA----LEDLTRGEMMQMEGCF-DLERYEEKTYCKTGSL 213

Query: 189 MCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +  +  + A++A  S +  E     +G  LGI FQ+ DD LD   D   L K+
Sbjct: 214 IANSLAATAVLADPSNSAHEVAAGEYGRRLGIAFQIVDDCLDITGDEKNLGKR 266


>gi|302325898|gb|ADL25099.1| polyprenyl synthetase family protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 317

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 13/212 (6%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTEC-ASLFNVNHLTALRVGAA 78
           + +++Q A +     +DRL++        GK+IRS  L           +        AA
Sbjct: 10  EQVIMQVAKNAPAGISDRLVTLFS---RKGKRIRSTLLCLLANCGAQKPDIDRVAHACAA 66

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  SL+HDD+  +D   +RRG+ T H ++    A++ G+ +L+ +   +   + + 
Sbjct: 67  VELLHLASLVHDDI--IDGTDVRRGQKTAHREWGTQVAVLIGDYVLSQSMRCVIDEQARN 124

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
                  +++S   +  + G +  ++    D  +       I   KT AL+  A   G I
Sbjct: 125 IP-----VIISDAADKLIIGEIM-ELDHCGDMSLSRKSYNEIIDGKTAALIDAAARIGGI 178

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +A   Q   +     G + GI FQ+ DDLLD 
Sbjct: 179 LAGFDQPMVDECAKMGTHFGIAFQIIDDLLDY 210


>gi|90422801|ref|YP_531171.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
 gi|90104815|gb|ABD86852.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
          Length = 288

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 15/212 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-HLTA 72
           RI+  L D +   A    T    RL  A+RYA+   G ++R  L    A+    +     
Sbjct: 6   RIERALTDAIGLAAV---TGCPPRLAEAMRYAVFPRGARVRPRLCHSVAAACGEDNPAAT 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
              GAA+E +HC SL+HDDLP  D    RRG+P+VH  + E  A++ G+ L+  AF+ I+
Sbjct: 63  EAAGAALELMHCASLVHDDLPCFDGAATRRGRPSVHKAFGEPLAVLTGDALIVLAFQTIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
             +        + L +++   +G+  G++ GQ  + +     E  +    + KTGAL   
Sbjct: 123 --RVTCAPERLAALTMTIGQAVGVPFGIVAGQAWECE----SEINLAHYHRSKTGALFVA 176

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           A  +GA  A A     E  R  GE +G  +Q+
Sbjct: 177 ATAAGAASAGADP---EPWRLVGEKIGEAYQV 205


>gi|77165696|ref|YP_344221.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
 gi|76884010|gb|ABA58691.1| Polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
          Length = 341

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 96/232 (41%), Gaps = 12/232 (5%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
              S  +E   R+D  L+  +    S + +Q  + +   I+     GK+IR  LV     
Sbjct: 12  DFFSYWKETRTRLDQELNCQIPVLFSALGSQQIETIQQIIK----NGKRIRGCLVFLMNQ 67

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                   AL    AIECI   SLIHDD   +D   IRR +P          A++ G+ +
Sbjct: 68  TQEGKLEDALPRAVAIECIQAASLIHDD--YLDEDVIRRKRPATWTVEGPRRAVLLGDIM 125

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMI 180
              A + ++         + ++ + ++ +  G    L  Q    +    + +++     I
Sbjct: 126 FATAIQSMAELSKDDGATV-ARAIATVAN--GAYQELFWQTKTRERRLHKLLEKNLYDHI 182

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +KTGAL   AC+ GAI A A +        FG   G  +Q+ADDL D   
Sbjct: 183 IYLKTGALFGAACQLGAIAAGALREIPTLAYAFGARTGEAYQIADDLEDFIA 234


>gi|114049916|emb|CAK50933.1| putative geranylgeranyl diphosphate synthase [Streptomyces
           ambofaciens]
 gi|114050138|emb|CAK51171.1| putative geranylgeranyl diphosphate synthase [Streptomyces
           ambofaciens]
          Length = 357

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 22/242 (9%)

Query: 9   LQENSKRIDTILDDLLLQTA-SHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN 66
           L    +++D +L+D L   A +  +  H   + + +R  L  GGK++R+ L         
Sbjct: 13  LDAVREQVDAVLEDFLEDKAGAAARRSHPPEVANTLRAFLAAGGKRVRALLCVVGWHAAG 72

Query: 67  VNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------QY 111
            +   A  LRV A++E    ++LIHDD+  MD+  +RRG+P VH              + 
Sbjct: 73  GSEDRAAVLRVAASLELFVAFALIHDDI--MDDSAVRRGRPAVHRALCTRLGQSSRAERL 130

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
               A++ GN  L +A E++ +    L+       +        + G     M    D+ 
Sbjct: 131 GAGGALLVGNLALIWAQELLHTADLPLRRRRTVHALYDAMLEEVMYGQYLDVMGTGPDDD 190

Query: 172 IDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           ID      I + KT  A +    + GA +A A           G  LG  FQ+ DDLLD 
Sbjct: 191 IDAA--LRIARYKTATATVERPLQLGAAVAGADDTTVNLCTALGLPLGEAFQIRDDLLDV 248

Query: 231 EE 232
             
Sbjct: 249 FG 250


>gi|89052673|ref|YP_508124.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
 gi|88862222|gb|ABD53099.1| farnesyl-diphosphate synthase [Jannaschia sp. CCS1]
          Length = 290

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN-HLTA 72
           RI+  +   + Q   ++      +L SA+ Y++  GG +IR  +    A          A
Sbjct: 6   RIEHAISAAITQAQGNVA---PTKLASALEYSVTPGGARIRPTICLSVALACGDPQPAMA 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                AIE IHC SL+HDD+P  D+  +RRGKP+VH  Y E  A++AG+ L+  +FE+++
Sbjct: 63  DAAATAIELIHCASLVHDDMPCFDDADVRRGKPSVHKAYSEPLALLAGDSLIIASFEVLT 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                        + +         G+  GQ  + +D+      +    + KTGAL   A
Sbjct: 123 RVAHHDPLRAIELMKILGQSTGMPGGICAGQGWESEDKI----DLSAYHRAKTGALFTAA 178

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
                  A A+  + E     G  +G  FQ+ADDL D    E  L K
Sbjct: 179 TRM---GAAAAGEDPEPWTELGARIGEAFQVADDLRDALYDEATLGK 222


>gi|295693497|ref|YP_003602107.1| polyprenyl synthetase [Lactobacillus crispatus ST1]
 gi|295031603|emb|CBL51082.1| Polyprenyl synthetase [Lactobacillus crispatus ST1]
          Length = 329

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 13/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN   P    +    I   L+++     + ++T ++D   + +  A  GGK +R  L+  
Sbjct: 1   MNNSQP---WQKYPLIRKPLEEVNQLIQATIRTPYSDLQDALLEMASNGGKYLRPSLLIL 57

Query: 61  CASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            A + +         +++ ++IE +H  SLIH     +D+   RRGK ++  ++ + TA+
Sbjct: 58  SAQIASKKETVSKQIIQLASSIEILHMASLIH--DDIIDDSDERRGKISIQARFGKDTAV 115

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            AG+ L T+ F++I +  ++    I++   +       L     GQM +  +   D    
Sbjct: 116 YAGDLLFTHFFDLILNAISEQDYMIKNAHTMHHLLAGEL-----GQMAERFNLSQDFNDY 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               K KT AL   A E G+   +  +   + L  FGENLGI FQ+ DD+LD   
Sbjct: 171 LTNVKGKTAALFRLAAEEGSHFGNGDEQTTQALASFGENLGIAFQIVDDILDYTG 225


>gi|156937132|ref|YP_001434928.1| polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566116|gb|ABU81521.1| Polyprenyl synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 271

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 23/235 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN  +   L++    ID  L++L+  T       + +R+++  +Y + GGK++R  LV  
Sbjct: 1   MNE-IQRALEKWRNIIDKELEELIKNT-------YEERVINVAKYIVNGGKRLRGALVML 52

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                  N   AL    A+E +H  SL  DD+  +D  ++RRG+P+  +       ++  
Sbjct: 53  VNEALGGNPEDALPAALALELVHASSLSIDDI--IDLDFVRRGRPSAWVAKGVANTVMVS 110

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVF 178
           N L+ +A  ++     +  D +                +  G++ D+    E        
Sbjct: 111 NLLIPHAIMLVKRYGKRAIDKVVEVW----------WEVSKGEVWDVHGPPEGKGVEAYE 160

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I + KT ++   +   G + A   +   E L  +G  LG  +Q+ADDL D E D
Sbjct: 161 AIIEAKTASMFALSAYLGGLAAG-EEERLEGLWRYGFLLGKAYQIADDLKDVEGD 214


>gi|67524619|ref|XP_660371.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4]
 gi|40744019|gb|EAA63201.1| hypothetical protein AN2767.2 [Aspergillus nidulans FGSC A4]
          Length = 1092

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 7/161 (4%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + +I++    A++AG+ LL  A   ++ 
Sbjct: 827 RLAEITELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALAR 884

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    +           +KT +L+ 
Sbjct: 885 LRDPEVTELLATVIANLVE--GEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLIS 942

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +C + A++ H++ +  E    +G NLG+ FQL DD+LD  
Sbjct: 943 KSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYT 983


>gi|310799250|gb|EFQ34143.1| polyprenyl synthetase [Glomerella graminicola M1.001]
          Length = 455

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 100/260 (38%), Gaps = 58/260 (22%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS--------------------------- 63
           + + H     +A  Y    GK +R  +V   A                            
Sbjct: 106 LGSGHPSLDRAAKYYTQAEGKHMRPLIVLLMARATALCPKGPRLHSAQPMGGVDTAISPP 165

Query: 64  --LFNVNHLTAL-------------------RVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
             L +VN  + L                   R+    E IH  SL+HDD+  +D+   RR
Sbjct: 166 NILVDVNPSSPLTSPAVEPTEVDSDILPSQRRLAEITELIHTASLLHDDV--IDHSVSRR 223

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P+ ++++    A++AG+ LL  A   ++  +      + + ++ +L    G    L  
Sbjct: 224 GSPSANLEFGNKMAVLAGDFLLGRASVALARLRNAEVIELLATVIANLVE--GEFMQLKN 281

Query: 163 QMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              D +     E           +KT +L+  +C + AI+  +     E    +G+NLG+
Sbjct: 282 TERDERRPVWSEDALAYYLQKTYLKTASLISKSCRASAILGGSDAASVEAAYAYGKNLGL 341

Query: 220 IFQLADDLLDC---EEDLPK 236
            FQL DD+LD    E++L K
Sbjct: 342 AFQLVDDMLDYTRSEKELGK 361


>gi|119717308|ref|YP_924273.1| polyprenyl synthetase [Nocardioides sp. JS614]
 gi|119537969|gb|ABL82586.1| Polyprenyl synthetase [Nocardioides sp. JS614]
          Length = 358

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/244 (24%), Positives = 91/244 (37%), Gaps = 25/244 (10%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLF--NV 67
              RI T +D  + + A  +     D  RL+     ++ GGK+ R+            +V
Sbjct: 13  FRDRIQTAVDAFVDEQAGQLGPLGGDAARLVREAHTSVSGGKRFRAAFCYWGHRAVAADV 72

Query: 68  NHLTALRVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------Q 110
              TAL    A +E +H  +L+HDDL  MD    RRG P  H                 Q
Sbjct: 73  PDETALVRACASLELLHASALVHDDL--MDASDTRRGHPATHRLFESEHRAAGWRGDPEQ 130

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           Y    AI+ G+ LL++A E++      +     +  +        + G      +  +  
Sbjct: 131 YGAAAAILLGDLLLSWADELLRRCGLPIAQVAPALEVFDRCRTEVIAGQFLDVSVQARGR 190

Query: 171 FIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             D      + + K+    +      GA +A A       L  FG  LG  FQL DDLL 
Sbjct: 191 A-DVETAMTVLRYKSAKYSIERPLHIGAALAGAGPETMAELSAFGLPLGEAFQLRDDLLG 249

Query: 230 CEED 233
              D
Sbjct: 250 VFGD 253


>gi|62185577|ref|YP_220362.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3]
 gi|62148644|emb|CAH64417.1| geranylgeranyl pyrophosphate synthase [Chlamydophila abortus S26/3]
          Length = 293

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 20/228 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+  LD+   +  S         + + + YAL  GGK+IR  LV   A    +     L 
Sbjct: 18  IENSLDEFGPKGFS---------IRAPVEYALTSGGKRIRPMLVCMMAKGLGMGRD-VLD 67

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE IH  +LI DDLP MD+   RRG+PTVH  +DE +A++A   L+  A+  I   
Sbjct: 68  SALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLN 127

Query: 135 KTQLKDNIRSQLMLSLTHNI---------GLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             +LK        +   ++I         G+ G+LGGQ  D+         V  I   KT
Sbjct: 128 AKKLKSLGVDSKEVDCAYDIISDITDKNFGVHGVLGGQYEDMFFTNHGPEHVQSIINKKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL   AC SG +    +     ++  F +  G++FQ+ DD+LD  +D
Sbjct: 188 GALFEIACVSGWLFGGGTPQCVPQVLEFSQTFGLLFQIKDDILDIHQD 235


>gi|189192558|ref|XP_001932618.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187974224|gb|EDU41723.1| decaprenyl-diphosphate synthase subunit 1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 385

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RR  P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 127 RLAEITELIHTASLLHDDV--IDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALAR 184

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    E           +K+ +L+ 
Sbjct: 185 LRDPEVTELLATVIANLVE--GEFMQLKNTARDDKNPAWTEDTVSYYLQKTYLKSASLIS 242

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            +C + AI+  ++ +  E    +G+NLG+ FQL DD+LD    E +L K
Sbjct: 243 KSCRAAAILGGSTPDVVEAAYLYGKNLGLAFQLVDDMLDYTVSEAELGK 291


>gi|197120826|ref|YP_002132777.1| polyprenyl synthetase [Anaeromyxobacter sp. K]
 gi|196170675|gb|ACG71648.1| Polyprenyl synthetase [Anaeromyxobacter sp. K]
          Length = 349

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 16/226 (7%)

Query: 20  LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           L + LL+  + +     D   +L +A R+ +  GGK+IR  +              A+  
Sbjct: 35  LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSP 134
             A E  H  +L+HDD+  +D+G +RRG+P   + +    ++++G+ LLT A EI+ + P
Sbjct: 95  AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEP 152

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                       M  L     LQ  L G           E     +   KT +L  +A  
Sbjct: 153 ARSAALPPLLATMRRLVEGEVLQLSLRG------GFSATEQAYMDVVMGKTASLFGWAAA 206

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +GA  A         L  FGE +G+ FQL DD LD   D   L K+
Sbjct: 207 AGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAADPRLLGKR 252


>gi|86156806|ref|YP_463591.1| farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773317|gb|ABC80154.1| Farnesyltranstransferase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 349

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 16/226 (7%)

Query: 20  LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           L + LL+  + +     D   +L +A R+ +  GGK+IR  +              A+  
Sbjct: 35  LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSP 134
             A E  H  +L+HDD+  +D+G +RRG+P   + +    ++++G+ LLT A EI+ + P
Sbjct: 95  AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEP 152

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                       M  L     LQ  L G           E     +   KT +L  +A  
Sbjct: 153 ARSAALPPLLATMRRLVEGEVLQLSLRG------GFSATEQAYMDVVMGKTASLFGWAAA 206

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +GA  A         L  FGE +G+ FQL DD LD   D   L K+
Sbjct: 207 AGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAADPGLLGKR 252


>gi|296111457|ref|YP_003621839.1| heptaprenyl diphosphate synthase, component II, putative
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832989|gb|ADG40870.1| heptaprenyl diphosphate synthase, component II, putative
           [Leuconostoc kimchii IMSNU 11154]
          Length = 332

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           K+ E    +   L  +L + +S       +    AIR  L  GK +R  L    + L + 
Sbjct: 8   KIWETFPELSEPLQSILTEMSSSWHIGFEEIDH-AIRSQLNAGKLVRPALTLIFSRLTSE 66

Query: 68  NH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++  +A+ +GA++E +H  +LIHDD+  +D   +RRG  ++  Q+ + TA+ AG+ LLT 
Sbjct: 67  SYNQSAISLGASVELLHLATLIHDDI--IDESKLRRGHESIQSQFGKDTAVYAGDYLLTG 124

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
            F ++        + +             LQ +L G++L  Q+ +      +  F   K 
Sbjct: 125 MFSLLERADKPAANKLAL---------TALQEILFGELLQKQNRYNIDTTFSAYFSQIKG 175

Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT AL   +   G +     S      +   GEN+GI FQL DD LD E 
Sbjct: 176 KTAALFKLSATFGLVSGTDYSDELFSTVSHLGENIGITFQLLDDYLDFES 225


>gi|119866839|ref|YP_936791.1| trans-hexaprenyltranstransferase [Mycobacterium sp. KMS]
 gi|119692928|gb|ABL90001.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. KMS]
          Length = 342

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 25/226 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +    + ++    RI+ ++   L +         ++ +  A+++    GGK+ R      
Sbjct: 22  DAAFAADVRAGVARIEDLMSTELGKA--------DELMAEAVQHLFQAGGKRFRPLFTVL 73

Query: 61  CASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A L        + V  A IE +H  +L HDD+  MD   +RRG P+ + ++    AI+A
Sbjct: 74  SARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSANARWGNNIAILA 131

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE-TQ 176
           G+ L   A  ++S    +      +  +++ T       ++ GQM + +   E +DE   
Sbjct: 132 GDYLFATASRLVSRLGPE------AVRIIADTFA----QLVTGQMRETRGAVEGVDEIEH 181

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              +   KT  L+  +   GA  + A + + ERL   G  +G  FQ
Sbjct: 182 YLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQ 227


>gi|86157523|ref|YP_464308.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774034|gb|ABC80871.1| farnesyl-diphosphate synthase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 293

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 82/246 (33%), Positives = 119/246 (48%), Gaps = 20/246 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVT 59
           M    P  ++   + +   ++  L   A         RL+ A RYALLGG K++R  LV 
Sbjct: 1   MTTPFP--IEAYLRSVAERVEPRLAALADARAPGGPSRLVEATRYALLGGGKRMRPALVL 58

Query: 60  ECASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
                   +   A   +R   A+E IH YSL+HDDLP+MD+  +RRG+PTVH  +DE TA
Sbjct: 59  AACEAHGGDASDASLAMRFAVALEAIHTYSLVHDDLPAMDDDDLRRGRPTVHRAFDEATA 118

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174
           ++ G+GL + AF  +      L     +   L+       Q M+ GQ  D+  E   + E
Sbjct: 119 VLVGDGLQSLAFAHL------LASPDPAAAPLARLLAENAQLMVEGQARDMAGEHARLGE 172

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED- 233
            +V  + + KTGAL+  A       A  +    E +   G  LG+ FQ+ADDLLD   D 
Sbjct: 173 AEVMELMRTKTGALLAAAVAG---GARCAGASAEAVYPVGLKLGLAFQIADDLLDLTADA 229

Query: 234 --LPKK 237
             L K+
Sbjct: 230 ATLGKR 235


>gi|89897810|ref|YP_514920.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56]
 gi|89331182|dbj|BAE80775.1| geranylgeranyl pyrophosphate synthase [Chlamydophila felis Fe/C-56]
          Length = 290

 Score =  145 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 74/235 (31%), Positives = 107/235 (45%), Gaps = 16/235 (6%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNV 67
            +     ID  +   L    S   +     + + + YAL  GGK+IR  LV   +    +
Sbjct: 4   FETYRAMIDEAIKHSLEDFGSKGVS-----IRAPVEYALTSGGKRIRPMLVCMFSKGLGM 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N    L    AIE IH  +LI DDLP MD+   RRG+PTVH  +DE +A++A   L+  A
Sbjct: 59  NRD-VLDSALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAA 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLT---------HNIGLQGMLGGQMLDIQDEFIDETQVF 178
           +  I S   +LK        +             N G+ G+LGGQ  D+  +      V 
Sbjct: 118 YSRIRSNAKKLKSQGVDPREVDFAYDTISEITDKNFGVNGVLGGQYEDMFFKNEGPEYVQ 177

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I   KTGAL   AC SG +          ++  F +  G++FQ+ DD+LD  +D
Sbjct: 178 SIINKKTGALFEIACASGWLFGGGDPLCVPQILEFSKTFGLLFQMKDDILDIHQD 232


>gi|330927830|ref|XP_003302019.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1]
 gi|311322852|gb|EFQ89885.1| hypothetical protein PTT_13690 [Pyrenophora teres f. teres 0-1]
          Length = 385

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RR  P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 127 RLAEITELIHTASLLHDDV--IDHSVSRRSAPSANVEFGNKMAVLAGDFLLGRASVALAR 184

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    E           +K+ +L+ 
Sbjct: 185 LRDPEVTELLATVIANLVE--GEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSASLIS 242

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            +C + AI+  ++ +  E    +G+NLG+ FQL DD+LD    E +L K
Sbjct: 243 KSCRAAAILGGSTPDVVEAAYLYGKNLGLAFQLVDDMLDYTVSEAELGK 291


>gi|54027096|ref|YP_121338.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM
           10152]
 gi|54018604|dbj|BAD59974.1| putative polyprenyl diphosphate synthase [Nocardia farcinica IFM
           10152]
          Length = 345

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 17/222 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  L + ++   + ++ +L   L      +Q        +A+  A  GGK+ R       
Sbjct: 25  DAELAATVRNGLEEVEKLLIAELSDGEDFLQD-------AALHLAKAGGKRFRPLFTILT 77

Query: 62  ASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             L       AL      +E +H  +L HDD+  MD   +RRG P+V+ ++    AI+AG
Sbjct: 78  GQLGPRPTDPALITAGTVVELVHLATLYHDDV--MDEATMRRGAPSVNSRWGNNIAILAG 135

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L  +A  + S+        I ++    L      + M   +  D             +
Sbjct: 136 DYLFAHASRLTSTLGPDAV-RIIAETFAELVTGQMRETMGARESQDPV------EHYLRV 188

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              KTG+L+  A   G   + A     ERL   G+ +G  FQ
Sbjct: 189 VWEKTGSLIAAAGRFGGTFSGADTAHIERLARLGDAVGTAFQ 230


>gi|168700708|ref|ZP_02732985.1| polyprenyl synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 599

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 18/237 (7%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNH----- 69
           +  L  L+ +  +    Q   R   AI Y  L  GGK+ R F+                 
Sbjct: 247 EPELPRLVPKARAGSPEQDPLRKHEAIAYDFLARGGKRSRPFITLAAYDALKGAPATLAD 306

Query: 70  ------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                     R   AIE  H  SL+HDD+   D+   R G  T+H  Y   TAI  G+ L
Sbjct: 307 SGWELPDHVKRAAVAIEAFHKASLVHDDIE--DDDAYRYGAETLHRTYGVGTAINVGDYL 364

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMI 180
           +   ++ +S  +  L   + + ++  L           G  L  +   D+ +       I
Sbjct: 365 IGVGYKCVSRDRKALGAEVAADVLDKLADAHIKLSEGQGAELLWREAKDKSLTTLDALKI 424

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
             +KT      A  +G  +A  +   ++ +  F  N+G+ FQ+ +D+ D   D   K
Sbjct: 425 YALKTSPAFEAALYTGVRLAGEATAYEKLIADFSRNVGVAFQILNDIKDWTGDEDNK 481


>gi|220915526|ref|YP_002490830.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953380|gb|ACL63764.1| Polyprenyl synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 349

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 16/226 (7%)

Query: 20  LDDLLLQTASHMQTQHND---RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
           L + LL+  + +     D   +L +A R+ +  GGK+IR  +              A+  
Sbjct: 35  LPESLLELEAQLTRATEDAEAKLQAAARHLVSAGGKRIRPMVTLLACGACGGEMRGAVPY 94

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-SSP 134
             A E  H  +L+HDD+  +D+G +RRG+P   + +    ++++G+ LLT A EI+ + P
Sbjct: 95  AVAAELTHSATLLHDDV--IDDGPVRRGQPASRVIWGNAVSVLSGDWLLTRALEIVSAEP 152

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                       M  L     LQ  L G           E     +   KT +L  +A  
Sbjct: 153 ARSAALPPLLATMRRLVEGEVLQLSLRG------GFSATEQAYMDVVMGKTASLFGWAAA 206

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           +GA  A         L  FGE +G+ FQL DD LD   D   L K+
Sbjct: 207 AGAWAAGEVGEIPAALVRFGEGIGVAFQLVDDALDYAADPRLLGKR 252


>gi|108862467|gb|ABA97399.2| Prenyl transferase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|222630738|gb|EEE62870.1| hypothetical protein OsJ_17673 [Oryza sativa Japonica Group]
          Length = 245

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 8/152 (5%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +   +   +++ +     
Sbjct: 1   MIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVI 58

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + SQ++               Q   + D  I      +    KT +L+  +  S AI +
Sbjct: 59  KLISQVIKDFASGEI------KQASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFS 112

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 113 GVSTAICEQMYEYGRNLGLSFQVVDDILDFTQ 144


>gi|331006565|ref|ZP_08329857.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
 gi|330419634|gb|EGG94008.1| Octaprenyl-diphosphate synthase [gamma proteobacterium IMCC1989]
          Length = 224

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/159 (39%), Positives = 100/159 (62%), Gaps = 4/159 (2%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E IH YSLIHDDLP+MD+  +RRGKPT HI +DE TAI+AG+ L  +AF I+      
Sbjct: 2   AVEAIHAYSLIHDDLPAMDDDDLRRGKPTCHIAFDEATAILAGDALQAFAFNILCEA-VD 60

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACES 195
              +I+ +++ +L+H  G  GM+GGQ +D+    + +   Q+  + ++KTGAL+  +   
Sbjct: 61  ADPSIQLKMLHTLSHASGANGMVGGQSIDLAAVQQTLTLNQLETMHRLKTGALISASTRL 120

Query: 196 GAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GA+    AS+++ + L  +   +G+ FQ+ DD+LD   D
Sbjct: 121 GALSTGIASESQLQALHEYANAIGLAFQVQDDILDVTSD 159


>gi|145511654|ref|XP_001441749.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409010|emb|CAK74352.1| unnamed protein product [Paramecium tetraurelia]
          Length = 346

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/234 (27%), Positives = 91/234 (38%), Gaps = 17/234 (7%)

Query: 11  ENSKRIDTIL-DDLLLQTASHMQTQHNDRLLSAIR---YAL--LGGKKIRSFLVTECASL 64
           ENSK  D IL     L      Q+     L  +I    Y L   GGK+ R       A L
Sbjct: 12  ENSKSFDKILPKKFELSDPQFSQSDDVKTLSQSISDPIYDLIDRGGKRWRPAFCFLIADL 71

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F   H     V A +E IH  +L+ DD+   D+  +RR    VHI+Y    A+ A N L 
Sbjct: 72  FKRAHEELYEVAALVELIHNATLVVDDIE--DDSSVRRNDKCVHIKYGLDVAVNAANYLY 129

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI------QDEFIDETQVF 178
                   +      D    ++ +       ++ +  GQ  DI       D    E Q  
Sbjct: 130 FAPLHYFLNSANYSNDQ---KMKMLEVSLSNMKIVHFGQAWDIFWHKQVCDIIPTEEQYL 186

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   KTGAL   A +   I+    +   + L  F   +GI FQ+ DD+L+   
Sbjct: 187 KMASYKTGALARMAAQLSCIVLEKDEKIGKALAEFAVQIGIAFQIQDDILNLNG 240


>gi|331701966|ref|YP_004398925.1| trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129309|gb|AEB73862.1| Trans-hexaprenyltranstransferase [Lactobacillus buchneri NRRL
           B-30929]
          Length = 325

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 87/226 (38%), Gaps = 8/226 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NV 67
           L     RI+  L  L     + +   +        +    GGK +R       +     V
Sbjct: 5   LWRQFPRINLKLIALEPYLLNAVNLPNQPIHHKISQLLKSGGKFLRPGFFYIYSEFGQEV 64

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +        AA+E +H  +LIHDD+  +D   IRRG  T+H +Y +  AI AG+ L T  
Sbjct: 65  DPAKIKAGAAAVELLHVATLIHDDV--IDESPIRRGIETIHTEYGQKNAIYAGDYLFTCY 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F  +        +  R            L G L  QM    ++ + E   F     KT  
Sbjct: 123 FTQVLKSTQDPANMKRH----VDAMQTILAGEL-DQMKYNFNQQMTEADYFHEITGKTAE 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           L     +  A+++ AS    +     G  +G  +Q+ DD+LD   D
Sbjct: 178 LFRLCFQQSALVSQASDQIFKLGGEIGLTIGQAYQILDDILDYSGD 223


>gi|46199593|ref|YP_005260.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27]
 gi|46197219|gb|AAS81633.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB27]
          Length = 312

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 16/226 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + L+   +R +  L +L+      ++  H D +         GGK+IR  LV   +    
Sbjct: 2   TDLEAPLRRFEEALSELVQSDVLFIRLIHQDLV-------TAGGKRIRPRLVFLASRALG 54

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                     A    +H  +L+HDDL  +D+   RRGK     +Y    ++++G+ LL+ 
Sbjct: 55  GAPFELELALAVE-LLHSATLLHDDL--IDDAETRRGKEAAFRKYGNAVSVLSGDFLLSR 111

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +I+           +++  +L+    LQ  +         E         I   KT 
Sbjct: 112 LLHVIAKTGRMELVERFAEVAKTLSEGEVLQFQVAAL------EDYSLENYERIITAKTA 165

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            LM  A E  A++  A    +E L  +G   G  FQ+ DD LD   
Sbjct: 166 VLMALATEGPALLLGAESRVREALYRYGLLYGQAFQMRDDYLDLMG 211


>gi|222823775|ref|YP_002575349.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100]
 gi|222538997|gb|ACM64098.1| polyprenyl-diphosphate synthase [Campylobacter lari RM2100]
          Length = 297

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 12/168 (7%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                + ++ A IE IH  SL+HDD+  +D   +RRG  +++ Q+    AI+ G+ L + 
Sbjct: 43  GESDISYKICAIIELIHAASLLHDDV--IDEAKLRRGVKSINAQFGAKNAIMLGDILYSK 100

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +S        +++   ++S    +   G L    L  +    D+     +   KT 
Sbjct: 101 AFYELSLI------DLKLAKIISNAVVMLSVGELMDVNL-SETFNTDKNAYLQMIYNKTA 153

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            L+  +   GA++A+ ++++      +G+NLG+ FQ+ DD+LD + D 
Sbjct: 154 VLIEASARCGALLANLNEDD---FAEYGKNLGLAFQIVDDILDIKGDE 198


>gi|195999464|ref|XP_002109600.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens]
 gi|190587724|gb|EDV27766.1| hypothetical protein TRIADDRAFT_20625 [Trichoplax adhaerens]
          Length = 302

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 18/193 (9%)

Query: 50  GKKIRSFLVTECASLFNVNH---------LTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           GK+IR  LV   A   N +               +G   E IH  SLIHDD+  +D  +I
Sbjct: 17  GKQIRPMLVYLTARACNYHTDPKKESKLTEGQSAIGVISEMIHTASLIHDDV--IDAAHI 74

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT++  + +  AI+ G+ +L+ A   +S  + +     R  ++LS   +  +QG  
Sbjct: 75  RRGKPTINSVWGQKKAILTGDYILSRATVALSKLRNE-----RVVIVLSQVLDDLVQGEF 129

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGI 219
             Q+   +D              KT +LM  +C++ AI+A   +Q   +    FG + GI
Sbjct: 130 M-QLGSKEDRGERFNHYIKKTFRKTASLMACSCKAVAILADPLNQFLHDVAFNFGMHFGI 188

Query: 220 IFQLADDLLDCEE 232
            FQL DDLLD   
Sbjct: 189 SFQLIDDLLDFIA 201


>gi|307105639|gb|EFN53887.1| hypothetical protein CHLNCDRAFT_58364 [Chlorella variabilis]
          Length = 634

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 35/227 (15%)

Query: 37  DRLLSAIRYALLGG---KKIRSFLVTECASLF-----NVNHLTA---------------- 72
             L  A  Y    G   K++RS ++   AS        ++HLT                 
Sbjct: 133 PALERAAEYFFRAGAEGKRLRSTMLLLMASALAPAPAGLDHLTVDTSPPAEHPPTVRRRQ 192

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
            R+    E IH  SL+HDD+  +D    RRGK +++  +    AI+AG+ LL  A   ++
Sbjct: 193 QRIAEITELIHVASLLHDDV--IDAAGTRRGKKSLNALFGNKVAILAGDFLLARASVSLA 250

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           + +      + SQ +  L     L      Q+    +E             KT +LM  +
Sbjct: 251 ALRNPEAILLMSQSLEHLVAGEIL------QLTADVEEAASMDHYMRKTYCKTASLMANS 304

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           C + A++      +      +G ++G+ FQL DD++D      ++ K
Sbjct: 305 CRAVAVLGGHGAGDCGAAAEYGRHVGLAFQLVDDVMDYTCSASEMGK 351


>gi|183985063|ref|YP_001853354.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1
           [Mycobacterium marinum M]
 gi|183178389|gb|ACC43499.1| multifunctional geranylgeranyl pyrophosphate synthetase IdsA1
           [Mycobacterium marinum M]
          Length = 346

 Score =  144 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 21/220 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           ID +  +L L    H+     D   S++R+    GK +R  L   CA         A+  
Sbjct: 38  IDNLSPELRLCAGFHIGWWEPDGRDSSVRH----GKAVRPALSITCARAAGGAMDAAIPA 93

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E +H  SL+HDD+  MD    RR +P   + Y    AI+ G               
Sbjct: 94  AVAVELVHDCSLLHDDI--MDGDVTRRHRPAAWVVYGVPMAILTG------------DAL 139

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTGALMCFA 192
             L  ++  +             +  GQ  D+  E        +   + + KTGAL   A
Sbjct: 140 LVLALDLVHEGASGSALRKAALELCAGQSADLAFEQRTKVWLPECLQMAQQKTGALFGVA 199

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           C+ GA+ A A     ++   FG +LG+ FQL DD+L    
Sbjct: 200 CQLGALAAGADSLVADQYAQFGRHLGLSFQLVDDILGIWG 239


>gi|304321515|ref|YP_003855158.1| polyprenyl synthetase family protein [Parvularcula bermudensis
           HTCC2503]
 gi|303300417|gb|ADM10016.1| polyprenyl synthetase family protein [Parvularcula bermudensis
           HTCC2503]
          Length = 317

 Score =  144 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 9/197 (4%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
             +    R+ +  GGK++R  +    A L          +  A+E IH  +L+HDD+  +
Sbjct: 22  PLIPEVARHLIAAGGKRLRPLMTLAAAELCGETGEGPRLLAGAVELIHAATLLHDDV--V 79

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRG  T +I +    +++ G+ L   AFE++    +     I    +LS    I 
Sbjct: 80  DESALRRGLRTANIVFGNKESVLVGDFLFARAFELMVRTGS-----IEVLGILSKASCII 134

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            +G +  Q+   Q+    +T    +   KT AL   A E+GA++A     +   +R +G 
Sbjct: 135 AEGEVL-QLTTSQNLETPQTIYLDVISAKTAALFAAAAEAGAVVAGGDAEKVAAMRAYGL 193

Query: 216 NLGIIFQLADDLLDCEE 232
           N GI +QL DD LD + 
Sbjct: 194 NFGIAYQLVDDALDYQS 210


>gi|329928274|ref|ZP_08282174.1| putative heptaprenyl pyrophosphate synthase component 2
           [Paenibacillus sp. HGF5]
 gi|328937953|gb|EGG34355.1| putative heptaprenyl pyrophosphate synthase component 2
           [Paenibacillus sp. HGF5]
          Length = 334

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 15/229 (6%)

Query: 20  LDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVG 76
            D LL +  S  +        L S +     GGK++R  +V   +    + +    ++  
Sbjct: 14  FDRLLREVVSSDRDLPPSSVVLSSVMDLINAGGKRLRPLMVVLGSRFGESGHEPAVMKTA 73

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             +E +H  SL+HDD+  +D   +RRG PT+H   D  TA+  GN ++  A E  +    
Sbjct: 74  VLLEYLHMASLVHDDI--IDQSDMRRGMPTLHETTDVQTAVHIGNYMIARAIEWAAGHPG 131

Query: 137 QLKDNIRSQLMLSLTH-----NIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGAL 188
              D     +     +        +  +  G   Q+    D  +   Q     + KT  L
Sbjct: 132 GDPDGNSEDISEDEAYRLAELAALVTELCMGEYDQLQHRFDFGLTMEQYLEKTRCKTALL 191

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           M    ++GA  AHA     ERL  FGE+LG+ FQ+ DDLLD  E  PK+
Sbjct: 192 MAHCLKAGAEAAHADAGTAERLFQFGESLGMAFQIRDDLLDFTE--PKE 238


>gi|149184238|ref|ZP_01862556.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
 gi|148831558|gb|EDL49991.1| Polyprenyl synthetase [Erythrobacter sp. SD-21]
          Length = 350

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 6/193 (3%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
             Y   GGK +R  +    A +F      A R  AA+E +H   LIHDD+   D   +RR
Sbjct: 49  AEYPKRGGKMLRPGICIANALIFGGELTQAARCAAAVELLHNALLIHDDVQ--DESDLRR 106

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGM 159
           G PT+H Q+    AI AG+ LL  AF+ +      L  ++  +++   +++         
Sbjct: 107 GLPTLHAQHGVALAINAGDALLFTAFQPLLDAIRPLGADLAQRVIEVTIAMARQTAEGQA 166

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLG 218
           L     D     + E     +   KT  + M +  + G +M    + +  R+  FG  LG
Sbjct: 167 LELGWRDRNVTELTEADYLRMALKKTAWMGMIWPAQLGVLMGGRGRIDPARVVRFGHFLG 226

Query: 219 IIFQLADDLLDCE 231
           + FQ+ DDL +  
Sbjct: 227 LAFQIEDDLRNLT 239


>gi|146284189|ref|YP_001174342.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri
           A1501]
 gi|145572394|gb|ABP81500.1| Geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri
           A1501]
          Length = 296

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 5/231 (2%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           N  LP    +N  R+   +D+ L       +++  D +  A+R   L  GK++R  L+  
Sbjct: 5   NSSLPLPQCDNLLRLRRQVDERLALRLPFPESEL-DTVTQALREGTLAPGKRLRPLLLLL 63

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                + +    L    A+E IH  SL  DD+P MDN  +RRG+PT+H+++ E  A++A 
Sbjct: 64  ALGDLDADPAIGLDPACALEMIHAASLFLDDMPCMDNASLRRGQPTIHLRFGEDVAVLAS 123

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVF 178
             LL++A+ I +   + L    R+  +  L   +G QG++ GQ  D+      +    V 
Sbjct: 124 VALLSHAYGITAMAPS-LSPRQRNDAVALLARAVGAQGLVRGQFRDLHGTGQSQQLDAVI 182

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              ++KTG+L   A E  A++  A +     LR F   LG+ FQL DD+ D
Sbjct: 183 ATNQLKTGSLFTAALELAALLVGADRALTAHLRGFASELGMAFQLLDDIAD 233


>gi|55981624|ref|YP_144921.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8]
 gi|55773037|dbj|BAD71478.1| octaprenyl-diphosphate synthase [Thermus thermophilus HB8]
          Length = 312

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 16/226 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + L+   +R +  L +L+      ++  H D +         GGK+IR  LV   +    
Sbjct: 2   TDLEAPLRRFEEALSELVQSDVLFIRLIHQDLV-------TAGGKRIRPRLVFLASRALG 54

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                     A    +H  +L+HDDL  +D+   RRGK     +Y    ++++G+ LL+ 
Sbjct: 55  GAPFELELALAVE-LLHSATLLHDDL--IDDAETRRGKEAAFRKYGNAVSVLSGDFLLSR 111

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +I+           +++  +L+    LQ  +         E         I   KT 
Sbjct: 112 LLHVIAKTGRMELVERFAEVAKTLSEGEVLQFQVAAL------EDYSLENYERIITAKTA 165

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            LM  A E  A++  A    +E L  +G   G  FQ+ DD LD   
Sbjct: 166 VLMALATEGPALLLGAESGVREALYRYGLLYGQAFQMRDDYLDLMG 211


>gi|288917476|ref|ZP_06411842.1| Farnesyltranstransferase [Frankia sp. EUN1f]
 gi|288351179|gb|EFC85390.1| Farnesyltranstransferase [Frankia sp. EUN1f]
          Length = 860

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 8/209 (3%)

Query: 32  QTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
             + +   L AIR   LGG  K++R  L    A    V       + AA E  H  SL+ 
Sbjct: 588 PAETSPHDLDAIRAYALGGHAKRLRPVLTLMLAEGLRVPTRAIEPLLAASELFHTASLLL 647

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DDLP+ DN   RRG+PT H  +DE +  +A   +++  F  ++            +++  
Sbjct: 648 DDLPAQDNATTRRGRPTAHRVFDEGSVQLAAVSMISSGFGQLARLHEHFPPVRVVEVVAY 707

Query: 150 LTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
               +G + +  GQ LD+       D  +  T +  + ++K+   +  A     ++    
Sbjct: 708 AGSTLGPERLCRGQNLDLHLARRADDRPVTGTDILEMYRLKSSTSIEAALVPLMMLLGRP 767

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
             E   +  +  + GI+FQ+ DD+LD   
Sbjct: 768 DREISLVERYARHAGIVFQIRDDVLDLTA 796


>gi|111073607|emb|CAL29452.1| geranyltranstransferase [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 243

 Score =  144 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 14/223 (6%)

Query: 16  IDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGG-KKI-RSFLVTECASLFNVNHLTA 72
           +D ++  LL  +T   +     ++ + A+ Y L    K I R  L+T  + +FN     A
Sbjct: 2   LDKLIKSLLIAETDKILSKVSQNKHILAMHYVLFAPTKHIIRPLLITALSQVFNSE---A 58

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGY--IRRGKPTVHIQYDEVTAIIAG-NGLLTYAFE 129
           + +  A++C+H +SLI DDLP +DN     +      + ++DE TA++   +  LT A E
Sbjct: 59  ISIAVAVKCVHTHSLIQDDLPYIDNSNNNSKNQLSCCYKKFDEATAVLVAEDAPLTLASE 118

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I+SSP      N R +++ S +   G +GM+G Q+LD    F    ++  +  MKT  L+
Sbjct: 119 ILSSPNKD--SNKRHEIIKSPSQMRGTKGMVGEQVLDSDKNF---GKIKKMHLMKTAKLL 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              C+ GAI+      ++  L  +  NLG+IFQ  DD  + E+
Sbjct: 174 AAPCKIGAIVGDTPDKQRRALYNYRINLGLIFQAEDDTENYEQ 216


>gi|108797750|ref|YP_637947.1| trans-hexaprenyltranstransferase [Mycobacterium sp. MCS]
 gi|108768169|gb|ABG06891.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. MCS]
          Length = 335

 Score =  144 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 25/226 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +    + ++    RI+ ++   L +         ++ +  A+++    GGK+ R      
Sbjct: 15  DAAFAADVRAGVARIEDLMSTELGKA--------DELMAEAVQHLFQAGGKRFRPLFTVL 66

Query: 61  CASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A L        + V  A IE +H  +L HDD+  MD   +RRG P+ + ++    AI+A
Sbjct: 67  SARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSANARWGNNIAILA 124

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE-TQ 176
           G+ L   A  ++S    +      +  +++ T       ++ GQM + +   E +DE   
Sbjct: 125 GDYLFATASRLVSRLGPE------AVRIIADTFA----QLVTGQMRETRGAVEGVDEIEH 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              +   KT  L+  +   GA  + A + + ERL   G  +G  FQ
Sbjct: 175 YLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQ 220


>gi|284992911|ref|YP_003411465.1| trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM
           43160]
 gi|284066156|gb|ADB77094.1| Trans-hexaprenyltranstransferase [Geodermatophilus obscurus DSM
           43160]
          Length = 352

 Score =  144 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 16/230 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           G L  +L     R++  L   +      ++        +A      GGK+ R  L    A
Sbjct: 34  GDLGVRLAAGLGRVEEALRTAVGSEHQFVRE-------AAGHLVAAGGKRFRPLLALLAA 86

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L + +           E  H  +L HDD+  MD   +RRG P+ + ++    AI+ G+ 
Sbjct: 87  ELGDPHGQGVTEAAVVCELTHLATLYHDDV--MDEAVVRRGAPSANSRWSNSIAILTGDF 144

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L   A ++++    +    I+++    L      + +      D  D ++D      +  
Sbjct: 145 LFARASDLLADLGPEAV-RIQARTFERLVTGQIRETVGAQPGDDPVDHYLD------VLA 197

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KTG+L+  +   GA  A         L  FGE +G+ FQL+DDLLD   
Sbjct: 198 DKTGSLVATSARFGASFAGVDAELVTALTAFGEEVGVAFQLSDDLLDIVS 247


>gi|260577316|ref|ZP_05845289.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
 gi|259020497|gb|EEW23820.1| Polyprenyl synthetase [Rhodobacter sp. SW2]
          Length = 289

 Score =  144 bits (364), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 91/236 (38%), Positives = 129/236 (54%), Gaps = 15/236 (6%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
                L  ++  I   LD       + M    +  ++ A+RYA  GGK++R FLV E A 
Sbjct: 2   SFKDVLLTDAAHIQARLD-------AAMAGLSDQPVVQAMRYATQGGKRLRGFLVLESAR 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L  +    A+   AAIE +H YSL+HDDLP MD+  +RRG PT H+++DE TA++AG+ L
Sbjct: 55  LHGIAAENAVSAAAAIEALHAYSLVHDDLPCMDDDDLRRGLPTCHVKWDEATAVLAGDAL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFM 179
            T AFE++  P     +  R  L+ SL    G  GM+ GQ LDI  E   E     Q+  
Sbjct: 115 QTMAFELLCDPALG-SEKARLALVASLARASGAAGMVYGQALDIAAETASEPLTLAQITE 173

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +Q  KTGAL+ ++ ++GA++A A       L  F   LG+ FQ+ADD+LD E D  
Sbjct: 174 LQAGKTGALISWSAQAGALLAGADPA---PLARFATALGLAFQIADDILDVEGDAA 226


>gi|325094604|gb|EGC47914.1| decaprenyl-diphosphate synthase subunit [Ajellomyces capsulatus
           H88]
          Length = 522

 Score =  144 bits (364), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   ++ 
Sbjct: 264 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALAR 321

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
            +      + S ++ +L    G    L     D  +    E   T       +K+ +L+ 
Sbjct: 322 LRDPEVIELLSTVIANLIE--GEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 379

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
            +C + A++ H+S    E    +G NLG+ FQL DD+LD     D L K
Sbjct: 380 KSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGK 428


>gi|226294533|gb|EEH49953.1| decaprenyl-diphosphate synthase subunit 1 [Paracoccidioides
           brasiliensis Pb18]
          Length = 374

 Score =  144 bits (364), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 116 RLAEITEVIHTASLLHDDV--IDNAVTRRSSVSANLEFGNKMAVLAGDFLLGRASVALAR 173

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L    LD ++ F  E           +K+ +L+ 
Sbjct: 174 LRDPEVIELVATVIANLIE--GEFMQLRNTELDEENPFFTEEAITYYLQKTYLKSASLIS 231

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++ H+S    E    +G NLG+ FQL DD+LD     E+L K
Sbjct: 232 KSCRAAALLGHSSPEVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGK 280


>gi|225555298|gb|EEH03590.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus
           G186AR]
          Length = 521

 Score =  144 bits (364), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   ++ 
Sbjct: 263 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALAR 320

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
            +      + S ++ +L    G    L     D  +    E   T       +K+ +L+ 
Sbjct: 321 LRDPEVIELLSTVIANLIE--GEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 378

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
            +C + A++ H+S    E    +G NLG+ FQL DD+LD     D L K
Sbjct: 379 KSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGK 427


>gi|170741854|ref|YP_001770509.1| polyprenyl synthetase [Methylobacterium sp. 4-46]
 gi|168196128|gb|ACA18075.1| Polyprenyl synthetase [Methylobacterium sp. 4-46]
          Length = 290

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 109/227 (48%), Gaps = 15/227 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           RI+  LD   +  +          L  AIRYA+  GG +IR  L    A     +   A 
Sbjct: 6   RIERALD---VAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVARACGDDDPAAS 62

Query: 74  RVGAA-IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
              AA IE +HC SL+HDDLP  D+  +RR KP+VH+ + E  A++AG+ L+  AFE ++
Sbjct: 63  DAAAAAIELLHCASLVHDDLPCFDDAPMRRQKPSVHVAFGEPIALLAGDALIVLAFETLA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
               ++ + + + + L         G++ GQ      E      +   Q+ KTGAL   A
Sbjct: 123 RGAARVPERLGTLVGLVARAVGSPAGIVAGQAW----ESEPSVGLSAYQQAKTGALFAAA 178

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
             +    A A+  E    R  GE LG  +Q+ADDL D    +E++ K
Sbjct: 179 TVT---GAAAAGAEAMPWRLLGEYLGEAYQVADDLRDVACRQEEVGK 222


>gi|320036615|gb|EFW18554.1| hexaprenyl pyrophosphate synthetase [Coccidioides posadasii str.
           Silveira]
          Length = 472

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 214 RLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALAR 271

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    E           +K+ +L+ 
Sbjct: 272 LRDPEVTELLATVIANLVE--GEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLIS 329

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++   +    E    +G NLG+ FQL DD+LD     E+L K
Sbjct: 330 KSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGK 378


>gi|119192214|ref|XP_001246713.1| hypothetical protein CIMG_00484 [Coccidioides immitis RS]
          Length = 472

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 214 RLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALAR 271

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    E           +K+ +L+ 
Sbjct: 272 LRDPEVTELLATVIANLVE--GEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLIS 329

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++   +    E    +G NLG+ FQL DD+LD     E+L K
Sbjct: 330 KSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGK 378


>gi|281491887|ref|YP_003353867.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis KF147]
 gi|281375598|gb|ADA65104.1| Heptaprenyl diphosphate synthase component II [Lactococcus lactis
           subsp. lactis KF147]
          Length = 319

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 8/229 (3%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L +   ++   ++  L  +     SH+  +++D   +       GGK +R   +   + 
Sbjct: 2   DLKNNFWKDYPELEKELVQVQQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              ++    L + A++E +H  +L+HDD+  +D+   RRG  T+  +Y    A+ AG+ L
Sbjct: 62  FTVLSENERLALAASVEMMHIATLVHDDV--IDHADTRRGVATLSAKYGPEIAVYAGDYL 119

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
               F ++S    +L +   ++ + S+   +G  G L GQ+    +              
Sbjct: 120 FIAVFRLMSEHSLELSN--LTKNIGSIERLLG--GEL-GQLNHHFNLQQTLDDYIENISG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KTG L   +     +++  +    +R    G N+GI FQ+ DD LD   
Sbjct: 175 KTGELFALSASVAPLISK-NNTLTKRAYKIGMNIGISFQIMDDYLDYAS 222


>gi|303313007|ref|XP_003066515.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240106177|gb|EER24370.1| Decaprenyl-diphosphate synthase , putative [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 472

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 214 RLAEITELIHTASLLHDDV--IDNAVTRRSVASANLEFGNKMAVLAGDFLLGRASVALAR 271

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    E           +K+ +L+ 
Sbjct: 272 LRDPEVTELLATVIANLVE--GEFMQLKNTAQDERNPAWTEDIIAYYLQKTYLKSASLIS 329

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++   +    E    +G NLG+ FQL DD+LD     E+L K
Sbjct: 330 KSCRAAALLGQTAPEVVEAAYTYGRNLGLAFQLVDDMLDYTISGEELGK 378


>gi|300174004|ref|YP_003773170.1| geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG
           18811]
 gi|299888383|emb|CBL92351.1| Geranyl pyrophosphate synthase [Leuconostoc gasicomitatum LMG
           18811]
          Length = 332

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 17/230 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           K+ E    +   L  +L + ++       D +  AIR  L  GK +R  L    + L + 
Sbjct: 8   KIWETFPELSEPLHAILTEMSASWHIGF-DEIDRAIRSQLNAGKLVRPALTLIFSQLSDQ 66

Query: 68  NH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           N+  +A+ +GA++E +H  +LIHDD+  +D   +RRG  ++  Q+ + TA+ AG+ LLT 
Sbjct: 67  NYNKSAISLGASVELLHLATLIHDDV--IDESKLRRGHESIQSQFGKDTAVYAGDYLLTG 124

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
            F ++ S    + + +             LQ +L G+++  Q+ +         F   K 
Sbjct: 125 MFSLLDSADKPVANKLAL---------TALQEILFGELVQKQNRYNLDTTFPTYFSQIKG 175

Query: 184 KTGALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT AL   +   G + +   +    + +   GEN+GI FQL DD LD E 
Sbjct: 176 KTAALFKLSATFGLVSSKTYNTELLDTVSKLGENIGITFQLLDDYLDFES 225


>gi|1749738|dbj|BAA13926.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 356

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)

Query: 45  YALLGGKKIRSFLVTECASL----FNVNHLTA----------------------LRVGAA 78
           Y +  GK++R  LV   +        ++                          LR+   
Sbjct: 66  YTIAQGKQMRPSLVLLMSKATSLFHGIDRSVVGDKYTDDDDLRSFSTGQILPSQLRLAQI 125

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL+HDD+  +D+  +RRG P+ ++ +    +I+AGN +L  A  +++  +   
Sbjct: 126 TEMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARASTVMARLRNPQ 183

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              + + ++  L     LQ         ++ +  +         +KT +L+  +C++  I
Sbjct: 184 VTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLISKSCKASTI 243

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   S         +G  +G  FQL DD+LD   
Sbjct: 244 LGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTS 277


>gi|118469870|ref|YP_885527.1| bifunctional short chain isoprenyl diphosphate synthase
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171157|gb|ABK72053.1| bifunctional short chain isoprenyl diphosphate synthase
           [Mycobacterium smegmatis str. MC2 155]
          Length = 329

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 25/226 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +    + +++   RI+ ++ D L +         ++ +  A+++    GGK+ R      
Sbjct: 9   DPAFAADVRDGVARIEDLMSDELGKA--------DELMAEAVQHLFQAGGKRFRPLFTVL 60

Query: 61  CASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A L        + V  A IE +H  +L HDD+  MD   +RRG  + + ++    AI+A
Sbjct: 61  SAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQMRRGAQSANARWGNNIAILA 118

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQ 176
           G+ L   A  ++S           +  +++ T       ++ GQM + +   D       
Sbjct: 119 GDYLFATASRLVSRLGPD------AVRVIADTFA----QLVTGQMRETRGAADHVDSVDH 168

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              +   KT  L+  +   GA  + A+  + ERL   G  +G  FQ
Sbjct: 169 YLKVVYEKTACLIAASGRFGATFSGANDEQIERLSRLGGIVGTAFQ 214


>gi|227548900|ref|ZP_03978949.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079028|gb|EEI16991.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 380

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 99/262 (37%), Gaps = 45/262 (17%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT- 59
           + G L + L E    ++ I             T+    L     + L GGK+IR      
Sbjct: 31  VKGALEAFLDERYAEVEKI---------GPPVTRSVQHLRD---FILGGGKRIRPLYAWT 78

Query: 60  ------ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ--- 110
                     + + +    LR  +++E I   +LIHDD+  +D    RRG PTVH     
Sbjct: 79  GFFGARAAGGVGSEDPEAVLRAVSSLELIQACALIHDDI--IDASDTRRGNPTVHRAVEA 136

Query: 111 -------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                        Y    AI+ G+  L +A ++            R+             
Sbjct: 137 RHSKDDLFGDSADYGRNEAILIGDFALIWAEDMWRYSGLSEAALTRAAEPWRGMRT---- 192

Query: 158 GMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLRCF 213
            ++GGQ+LDI  E      V M   + + KT A  +      GA +A A  +  E  R +
Sbjct: 193 EVIGGQLLDIALEAAANESVEMANNVNRYKTAAYTIERPLHLGAAIAGAPADTIEAFRGY 252

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
           G ++GI FQL DDLL    D  
Sbjct: 253 GRDIGIAFQLRDDLLGVFGDEA 274


>gi|237752690|ref|ZP_04583170.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376179|gb|EEO26270.1| polyprenyl synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 306

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 18/223 (8%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
             RI+  + + L +  S +    +  L S        GK +RS L    A         +
Sbjct: 4   LTRIEAKVQEFLKELQSPLVLNLSKNLQS--------GKMLRSKLALSIA----GESEES 51

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           +R+ A IE I   SL+HDD+  +D    RR KP+V+  + +  AI+ G+ L + AF   S
Sbjct: 52  VRLCAIIEMIQNASLLHDDV--IDKATTRRNKPSVNALFGDKNAIMLGDVLYSKAF---S 106

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                 KD  +   +++        G +    L       DE +   + + KT AL+   
Sbjct: 107 ELTCFAKDYPQIPRIVANAVTTLAIGEIEDVALSGAF-NADEAKYLAMIEHKTAALIEAT 165

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + A +A   + +    + +G NLG+ FQ+ DD+LD   D  
Sbjct: 166 AYAAAFLAGKDEKDARGFQIYGRNLGVAFQIIDDVLDIIADSK 208


>gi|126433376|ref|YP_001069067.1| trans-hexaprenyltranstransferase [Mycobacterium sp. JLS]
 gi|126233176|gb|ABN96576.1| Trans-hexaprenyltranstransferase [Mycobacterium sp. JLS]
          Length = 325

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 25/226 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +    + ++    RI+ ++   L +         ++ +  A+++    GGK+ R      
Sbjct: 5   DAAFAADVRAGVARIEDLMSTELGKA--------DELMAEAVQHLFQAGGKRFRPLFTVL 56

Query: 61  CASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A L        + V  A IE +H  +L HDD+  MD   +RRG P+ + ++    AI+A
Sbjct: 57  SARLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSANARWGNNIAILA 114

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE-TQ 176
           G+ L   A  ++S    +      +  +++ T       ++ GQM + +   E +DE   
Sbjct: 115 GDYLFATASRLVSRLGPE------AVRIIADTFA----QLVTGQMRETRGAVEGVDEIEH 164

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              +   KT  L+  +   GA  + A + + ERL   G  +G  FQ
Sbjct: 165 YLKVVYEKTACLIAASGRFGATFSGADETQIERLARLGGIVGTAFQ 210


>gi|332669463|ref|YP_004452471.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
 gi|332338501|gb|AEE45084.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
          Length = 334

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 26/237 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYAL-LGGKKIRSFLVT 59
           +  L ++L E    ++  L D +          H D+L   A R+ +  GGK++R  L  
Sbjct: 11  DPALSARLTERLALVEERLRDAVT---------HADQLADDAARHLVNAGGKRLRPLLTL 61

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L + +    +     +E  H  +L HDD+  MD+  +RRG P+ H  +    AI+ 
Sbjct: 62  LTAELGDGSRREVVDAATVVELTHLATLYHDDV--MDSAPLRRGAPSAHEVWGNSVAILT 119

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---Q 176
           G+ L   A   ++       D +R Q           + +  GQ+ +       E     
Sbjct: 120 GDLLFARASATVAGLG---PDAVRIQ-------AATFERLCLGQLHETVGPRPGEDPVAH 169

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +   KT +L+  +   GA+ A    +    +  FGE LG+ FQLADD++D   D
Sbjct: 170 YLQVLADKTASLVATSARFGAMFAGCRPDVVRTVTGFGEKLGVAFQLADDVIDLTSD 226


>gi|261193789|ref|XP_002623300.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
           SLH14081]
 gi|239588905|gb|EEQ71548.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
           SLH14081]
          Length = 520

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 14/185 (7%)

Query: 62  ASLFNVNHLTALRV----GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                 N    L          E IH  SL+HDD+  +DN   RR   + ++++    A+
Sbjct: 246 CDADGGNTTDILPAQRRLAEITELIHTASLLHDDV--IDNAVTRRSAVSANLEFGNKMAV 303

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--- 174
           +AG+ LL  A   ++  +      + S ++ +L    G    L     D  +    E   
Sbjct: 304 LAGDFLLGRASVALARLRDPEVIELLSTVIANLIE--GEFMQLKNTERDELNPSFTEQTI 361

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--- 231
           T       +K+ +L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD     
Sbjct: 362 TYYLQKTYLKSASLISKSCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLDYTISG 421

Query: 232 EDLPK 236
           E+L K
Sbjct: 422 EELGK 426


>gi|145608148|ref|XP_360800.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145015645|gb|EDK00135.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 364

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 24/176 (13%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++ G+ LL  A   ++ 
Sbjct: 106 RLAEITELIHTASLLHDDV--IDHSESRRGSPSANLEFGNKMAVLGGDFLLGRASVALAR 163

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----------TQVFMIQKM 183
            +      + + ++           ++ G+ + +++   DE          T       +
Sbjct: 164 LRDAEVTELLATVIA---------NLVEGEFMQLKNTSRDESRPVWSEDALTYYLQKTYL 214

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           KT +L+  +C + A++  A     +    FG+NLG+ FQL DD+LD      DL K
Sbjct: 215 KTASLISKSCRASALLGGADAQTVDAAYAFGKNLGLAFQLVDDMLDYTVSAVDLGK 270


>gi|62959215|gb|AAY23715.1| farnesyl diphosphate synthase [Synechococcus sp. WH 6501]
          Length = 145

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRG+PT HI +DE TAI+AG+ L T AF  ++     L D +R  ++ 
Sbjct: 1   HDDMPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLAEA-PGLDDQVRLAMVR 59

Query: 149 SLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQN 205
            L    G QGM GGQ +D++   + +   Q+  + + KTGAL+  +   GA+ A   +++
Sbjct: 60  ELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATEVNED 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           +   L  + + LG+ FQ+ DD+LD E
Sbjct: 120 QLAALTVYSQTLGLAFQVQDDILDVE 145


>gi|256370650|ref|YP_003108475.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009442|gb|ACU52802.1| putative polyprenyl synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 317

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 11/187 (5%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           + L  GK +R  L+     +         ++ + IE IH  S+IHDD+  +DN   RRG 
Sbjct: 36  FFLKKGKYVRPLLIFLITKMLGTISKKTYKLASIIELIHTASIIHDDV--IDNSSFRRGF 93

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            T++  ++   A+I G+ + + +  +  +  +   +N+ S L+L ++           Q+
Sbjct: 94  LTINSLWNNKIAVIFGDYIFSKSLNLALNHNSNHYNNLFSNLILKMSEGE------LYQI 147

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACE-SGAIMAHASQNEKERLRCFGENLGIIFQL 223
             I++    E     I   KT  L+   CE SG ++    ++    L+  G  +G+ FQ+
Sbjct: 148 DFIKNHKFSEKNYKKIIFNKTALLISTCCEQSGKLL--QKKHTLFFLKKIGILIGLSFQI 205

Query: 224 ADDLLDC 230
            DDLLD 
Sbjct: 206 KDDLLDY 212


>gi|224001362|ref|XP_002290353.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973775|gb|EED92105.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 318

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 13/188 (6%)

Query: 50  GKKIRSFLVTECASL---FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK+ R  +V   A      +       ++G  +E IH  SLIHDD+  +D    RRG   
Sbjct: 37  GKRFRPTIVQLMAKANHQGSEVWRKQAQLGQIVEMIHVASLIHDDV--LDEADTRRGGEA 94

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           VH  Y    A++AG+ LL  A  +++       +N     +++      + G +  Q+  
Sbjct: 95  VHKLYSNKVAVLAGDYLLARASVLLARL-----ENTAVVQIMATALESLVAGEIM-QLKA 148

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLGIIFQLA 224
             +E +           KT +L+C+AC S A++   +           FG ++G+ FQ+ 
Sbjct: 149 SPEELLQMQSYLKKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHMGLAFQIQ 208

Query: 225 DDLLDCEE 232
           DD+LD   
Sbjct: 209 DDILDFTA 216


>gi|30686146|ref|NP_850234.1| geranyl diphosphate synthase, putative / GPPS, putative /
           dimethylallyltransferase, putative / prenyl transferase,
           putative [Arabidopsis thaliana]
 gi|330253906|gb|AEC09000.1| geranyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 321

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 28/216 (12%)

Query: 37  DRLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTALR-----------------VG 76
            +L SA  Y     + GK+ RS ++   A+  NV    AL                  + 
Sbjct: 7   PKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIA 66

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
              E IH  SL+HDD+  +D+   RRG  ++++      +++AG+ LL+ A   +++ K 
Sbjct: 67  EITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKN 124

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                + +  +  L     +      ++    ++             KT +L+  +C++ 
Sbjct: 125 TEVVALLATAVEHLVTGETM------EITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 178

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A++   +         +G NLG+ FQL DD+LD   
Sbjct: 179 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTG 214


>gi|25028623|ref|NP_738677.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314]
 gi|259507682|ref|ZP_05750582.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
 gi|23493909|dbj|BAC18877.1| putative polyprenyl synthase [Corynebacterium efficiens YS-314]
 gi|259164729|gb|EEW49283.1| polyprenyl synthetase [Corynebacterium efficiens YS-314]
          Length = 366

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 37/248 (14%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTE---CASLFNVN 68
           +   L   L   A+++       +  A+ Y     L GGK+IR   V      A     +
Sbjct: 18  VRERLTRFLDDRAANVVAIGGP-VTEALSYLRDFVLNGGKRIRPLYVWAGFVAAQGPGRS 76

Query: 69  HLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ--------------- 110
                  L   A++E I   +LIHDD+  +D+   RRG PTVH                 
Sbjct: 77  SEDINAVLDAAASLEFIQACALIHDDI--IDSSDTRRGAPTVHRAVESMHGAVGLEGDAA 134

Query: 111 -YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            + E  AI+AG+  L +A +++           R++             ++GGQ+LDI  
Sbjct: 135 HFGESVAILAGDMALVWAEDMLQDSGLSAAALARARDAWRGMRT----EVIGGQLLDIYL 190

Query: 170 EFIDETQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           E      V +   + + KT A  +      GA +A  +    + LR +G ++GI FQL D
Sbjct: 191 EAQASESVELANSVNRFKTAAYTIERPLHLGASLAGGAPELIDALRNYGRDIGIAFQLRD 250

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 251 DLLGVFGD 258


>gi|261404272|ref|YP_003240513.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
 gi|261280735|gb|ACX62706.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
          Length = 334

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 13/223 (5%)

Query: 20  LDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRVG 76
            D LL +  S  +        L S +     GGK++R  +V   +    + +    ++  
Sbjct: 14  FDRLLREVVSSDRDLPPSSVVLSSVMDLINAGGKRLRPLMVVLGSRFGESGHEPAVMKTA 73

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS---- 132
             +E +H  SL+HDD+  +D   +RRG PT+H   D  TA+  GN ++  A E  +    
Sbjct: 74  VLLEYLHMASLVHDDI--IDQSDMRRGMPTLHETTDVQTAVHIGNYMIARAIEWAAGHPG 131

Query: 133 -SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGAL 188
             P    +D    +          +  +  G   Q+    D  +   Q     + KT  L
Sbjct: 132 GDPDGNSEDVSEDEAYRLAELAALVTELCMGEYDQLQHRFDFGLTMEQYLEKTRCKTALL 191

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           M    ++GA  AHA     ERL  FGE+LG+ FQ+ DDLLD  
Sbjct: 192 MAHCLKAGAEAAHADAGTAERLFQFGESLGMAFQIRDDLLDFT 234


>gi|213409778|ref|XP_002175659.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212003706|gb|EEB09366.1| decaprenyl-diphosphate synthase subunit 1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 381

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 47/261 (18%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--- 65
           ++++ KR+   +  +L     H+Q        ++  Y L  GK++R  LV   +      
Sbjct: 40  IRDDLKRVSPGMRRMLGCNLDHLQD-------ASTYYTLAQGKQLRPSLVLLVSRAVSLL 92

Query: 66  -NVNHLTA----------------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
             +N   A                      LR+    E IH  SL+HDD+  +D    RR
Sbjct: 93  NGINRSVASERYILDCNPALLLDGDVLPSQLRLAQITEMIHVASLLHDDV--IDLATHRR 150

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ----G 158
           G+ + +I +    A+ AG+ +L  A   ++  +      + + ++  L     LQ     
Sbjct: 151 GQVSGNIAFGNQQAVFAGDFILARASTAMARLRNTRVTELLATVIADLIRGEFLQLRNVD 210

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
             GG  L                 +KT +L+  +C + A++  A  +  + +  FG  LG
Sbjct: 211 EKGGDALQ-----ASFDYYLEKSYLKTASLISKSCMAAAVLGKAVPSIVQAIGEFGRCLG 265

Query: 219 IIFQLADDLLDCE---EDLPK 236
           I FQL DD LD +    DL K
Sbjct: 266 IAFQLVDDALDFKSTDGDLGK 286


>gi|76800954|ref|YP_325962.1| multifunctional long-chain (E)-prenyl diphosphate synthase
           [Natronomonas pharaonis DSM 2160]
 gi|76556819|emb|CAI48393.1| probable multifunctional long-chain (E)-prenyl diphosphate synthase
           [Natronomonas pharaonis DSM 2160]
          Length = 291

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 30/238 (12%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
             L+     +++ L+ +L  T     T   + +      +L GGK++R  +         
Sbjct: 2   EYLERRRALVESRLEAVLDATEPDAMTDRLEHV------SLSGGKRVRPMVALLAFEAAG 55

Query: 67  V-----------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
                           A+     IE +H  SL+ DD+  +D   +RRG  +    +    
Sbjct: 56  GELVGEDGRGSEPSRNAIDFAVGIELVHNASLVVDDI--IDESELRRGVDSAWAAFGYGP 113

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           AI   +GLL  AF + S+    ++           T    +  +  G+  ++ +    E 
Sbjct: 114 AITTSDGLLGEAFSLFSADPRAMR-----------TVAEAMVELGEGEATELVERPDSEA 162

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               + + KTGAL   A E GAI A A     +    + E +GI FQ+ DD+LD   D
Sbjct: 163 AYMELARRKTGALFRAAAELGAIAADADTYAVDAFGQYAERVGIAFQIRDDVLDATAD 220


>gi|327482515|gb|AEA85825.1| geranylgeranyl pyrophosphate synthetase [Pseudomonas stutzeri DSM
           4166]
          Length = 307

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 5/231 (2%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTE 60
           N  LP    +N  R+   +D+ L       +++  D +  A+R   L  GK++R  L+  
Sbjct: 16  NSSLPLPQCDNLLRLRRQVDERLALRLPFPESEL-DTVTQALREGTLAPGKRLRPLLLLL 74

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                + +    L    A+E IH  SL  DD+P MDN  +RRG+PT+H+++ E  A++A 
Sbjct: 75  ALGDLDADPAIGLDPACALEMIHAASLFLDDMPCMDNASLRRGQPTIHLRFGEDVAVLAS 134

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVF 178
             LL++A+ I +   + L    R+  +  L   +G QG++ GQ  D+    +      V 
Sbjct: 135 VALLSHAYGITAMAPS-LSPRQRNDAVALLARAVGAQGLVRGQFRDLHGTGQAQQLDAVI 193

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
              ++KTG+L   A E  A++  A +     LR F   LG+ FQL DD+ D
Sbjct: 194 ATNQLKTGSLFTAALELAALLVGADRALTAHLRGFASELGMAFQLLDDIAD 244


>gi|151946397|gb|EDN64619.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|190408825|gb|EDV12090.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae
           RM11-1a]
 gi|256273178|gb|EEU08127.1| Coq1p [Saccharomyces cerevisiae JAY291]
 gi|259144849|emb|CAY77788.1| Coq1p [Saccharomyces cerevisiae EC1118]
 gi|323334502|gb|EGA75876.1| Coq1p [Saccharomyces cerevisiae AWRI796]
 gi|323338819|gb|EGA80034.1| Coq1p [Saccharomyces cerevisiae Vin13]
 gi|323349821|gb|EGA84035.1| Coq1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 473

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 43/204 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISR 234

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------------------------- 167
                   + S  + +L     +Q        DI                          
Sbjct: 235 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 294

Query: 168 ----------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                      D+ I+    + I K  +KT AL+  +C   AI++ AS    +    FG 
Sbjct: 295 PSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGR 354

Query: 216 NLGIIFQLADDLLDCE---EDLPK 236
           NLGI FQL DD+LD     +DL K
Sbjct: 355 NLGICFQLVDDMLDFTVSGKDLGK 378


>gi|239613774|gb|EEQ90761.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
           ER-3]
 gi|327350044|gb|EGE78901.1| hexaprenyl pyrophosphate synthetase Coq1 [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 520

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 14/185 (7%)

Query: 62  ASLFNVNHLTALRV----GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                 N    L          E IH  SL+HDD+  +DN   RR   + ++++    A+
Sbjct: 246 CDADGGNTTDILPAQRRLAEITELIHTASLLHDDV--IDNAVTRRSAVSANLEFGNKMAV 303

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--- 174
           +AG+ LL  A   ++  +      + S ++ +L    G    L     D  +    E   
Sbjct: 304 LAGDFLLGRASVALARLRDPEVIELLSTVIANLIE--GEFMQLKNTERDELNPSFTEQTI 361

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--- 231
           T       +K+ +L+  +C + A++ H+S    E    +G NLG+ FQL DD+LD     
Sbjct: 362 TYYLQKTYLKSASLISKSCRAAALLGHSSPQIVEAAYSYGRNLGLAFQLVDDMLDYTISG 421

Query: 232 EDLPK 236
           E+L K
Sbjct: 422 EELGK 426


>gi|169600423|ref|XP_001793634.1| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15]
 gi|160705435|gb|EAT89776.2| hypothetical protein SNOG_03045 [Phaeosphaeria nodorum SN15]
          Length = 292

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RR  P+ +I++    A++AG+ LL  A   ++ 
Sbjct: 34  RLAEITELIHTASLLHDDV--IDHSISRRSAPSANIEFGNKMAVLAGDFLLGRASVALAR 91

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    E           +K+ +L+ 
Sbjct: 92  LRDPEVTELLATVIANLVE--GEFMQLKNTARDEKNPAWTEDTVSYYLQKTYLKSASLIS 149

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + AI+  ++    E    +G+NLG+ FQL DD+LD     E+L K
Sbjct: 150 KSCRAAAILGGSTPEVVEAAYLYGKNLGLAFQLVDDMLDYTVSGEELGK 198


>gi|149915300|ref|ZP_01903828.1| lipoyl synthase [Roseobacter sp. AzwK-3b]
 gi|149811021|gb|EDM70860.1| lipoyl synthase [Roseobacter sp. AzwK-3b]
          Length = 299

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 83/227 (36%), Positives = 119/227 (52%), Gaps = 14/227 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           + + R+   LD +L           +  +  A+RYA  GGK+IR+ LV + A L ++   
Sbjct: 18  QQAARVQDHLDRVLAAF-------GDGAVAQAMRYACSGGKRIRARLVLDGARLHDIPEA 70

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            AL    AIE +H YSL+HDDLP MD+  +RRG+PTVHI+++E TA++ G+ L   AFE+
Sbjct: 71  RALWPACAIEAMHAYSLVHDDLPCMDDDDLRRGQPTVHIRWNEATAVLTGDALQALAFEL 130

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQVFMIQKMKTG 186
            + P        R+ L LSL    G QGM+ GQ LDI  E  D      ++  +Q  KTG
Sbjct: 131 ATHPDGAATAQARADLALSLARAAGGQGMVLGQALDIAAETADRPLTLDEITHLQAGKTG 190

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AL+ +A  +G  MA A                  FQ+ DD++D   D
Sbjct: 191 ALIEWAACAGPRMALADTAPLAAYAAALGL---AFQIQDDVIDVIGD 234


>gi|319443462|pdb|3AQ0|A Chain A, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443463|pdb|3AQ0|B Chain B, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443464|pdb|3AQ0|C Chain C, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443465|pdb|3AQ0|D Chain D, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443466|pdb|3AQ0|E Chain E, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443467|pdb|3AQ0|F Chain F, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443468|pdb|3AQ0|G Chain G, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
 gi|319443469|pdb|3AQ0|H Chain H, Ligand-Bound Form Of Arabidopsis MediumLONG-Chain Length
           Prenyl Pyrophosphate Synthase (Surface Polar Residue
           Mutant)
          Length = 348

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 30/248 (12%)

Query: 7   SKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTEC 61
           S ++E       + D+L  L      M      +L SA  Y     + GK+ RS ++   
Sbjct: 2   SLVEEELDPFSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLM 61

Query: 62  ASLFNVNHLTALR-----------------VGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           A+  +V    AL                  +    E IH  SL+HDD+  +D+   RRG 
Sbjct: 62  ATALDVRVPEALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDV--LDDADTRRGV 119

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            ++++      +++AG+ LL+ A   +++ K      + +  +  L     +      ++
Sbjct: 120 GSLNVVMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETM------EI 173

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                              KT +L+  +C++ A++   +         +G NLG+ FQL 
Sbjct: 174 TSSTAARYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLI 233

Query: 225 DDLLDCEE 232
           DD+LD   
Sbjct: 234 DDILDFTG 241


>gi|310658722|ref|YP_003936443.1| farnesyltransferase [Clostridium sticklandii DSM 519]
 gi|308825500|emb|CBH21538.1| putative Farnesyltransferase [Clostridium sticklandii]
          Length = 311

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 7/183 (3%)

Query: 50  GKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R   +   AS  N   H  A+ +  AIE  H  +L+HDD+  +D+   RRG  ++ 
Sbjct: 38  GKNLRGNCILIVASDENQFVHEDAINLAVAIELFHLATLVHDDI--IDDSPKRRGMDSLQ 95

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++D+ TA+I G+ +L  A E+  + K  +KD  +   + +   ++ L  ++  Q  ++ 
Sbjct: 96  SRFDKKTAVICGDYILAMAIEL--ALKVDIKDEYKKYSLANYAKSVCLGELM--QDTNLF 151

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +   +   I + KT AL   A  SGAI+    ++  +  +  G  +G+IFQ++DD +
Sbjct: 152 NYNLSLKRYLTIIRGKTAALFEAAFVSGAIVLGEPKSNVDLYKNIGRYIGMIFQMSDDCM 211

Query: 229 DCE 231
           D E
Sbjct: 212 DYE 214


>gi|145223562|ref|YP_001134240.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315443909|ref|YP_004076788.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
 gi|145216048|gb|ABP45452.1| geranylgeranyl-diphosphate synthase [Mycobacterium gilvum PYR-GCK]
 gi|315262212|gb|ADT98953.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
          Length = 359

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 104/258 (40%), Gaps = 32/258 (12%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           M+   PS + E    ++  L + L    + A+++ T +     +   + L GGK++R   
Sbjct: 1   MDAAAPSAV-ELVNAVNEELREYLRGRRRDAAYIGTDYAVLTEALEEFVLRGGKRLRPAF 59

Query: 58  VTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------ 109
                            +R+ +A+E +H  +L+HDDL  +D    RRG PTVH       
Sbjct: 60  AYWGFRAVAGTEPEPHIMRLFSALELLHACALVHDDL--IDASATRRGLPTVHRIFSERH 117

Query: 110 ----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
                     Q+    AI+ G+  L +A +II+        + R Q + +         +
Sbjct: 118 RSNNWLGSSDQFGLSAAILLGDLSLVWADDIIAEAPIDDAAHRRVQRVWAAIRT----EV 173

Query: 160 LGGQMLDIQDEFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGE 215
           LGGQ LDI +E      V     +   KT    +    + GA  A       E     G 
Sbjct: 174 LGGQYLDIVNEASGSETVASALTVNIYKTASYTISRPLQLGAAAAGDRPEILEAFHELGT 233

Query: 216 NLGIIFQLADDLLDCEED 233
           +LG+ FQL DD+L    D
Sbjct: 234 SLGVAFQLRDDVLGVYGD 251


>gi|326776680|ref|ZP_08235945.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
 gi|326657013|gb|EGE41859.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
          Length = 347

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   AS    +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 62  GKAIRPALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AII G+ +L  A  +++           ++L      +  +  +  GQ  D   
Sbjct: 120 VFGIPDAIITGDAMLALAQRLLAEDPHPAAARAVARL------SSCIIELCAGQQADCAF 173

Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      I   +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 174 EERGPEEITLDECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLI 233

Query: 225 DDLLDCEED 233
           DDL+    D
Sbjct: 234 DDLIGIWGD 242


>gi|157866922|ref|XP_001682016.1| farnesyl synthetase [Leishmania major strain Friedlin]
 gi|68125467|emb|CAJ03328.1| putative solanesyl-diphosphate synthase [Leishmania major strain
           Friedlin]
          Length = 359

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 35/224 (15%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLF---------------------NVNHLTA 72
           +N+ L  A +Y L  GGK +R  LV   A                            L  
Sbjct: 50  NNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSAHLLEEPIGSLDEVTPGTILPF 109

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+    E IH  SL+HDD+  +DN   RRG+P +H  YD   A++AG+ +L  A   I+
Sbjct: 110 LRLAEVTELIHTASLLHDDV--IDNTDTRRGRPALHKVYDAKRAVLAGDYMLARASFYIA 167

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           + +       R  ++++        G L            D  +       KT +L+  +
Sbjct: 168 TLQVP-----RIVILMTTALEELTSGELMQMDGCF-----DIPRYEQKSFCKTASLIANS 217

Query: 193 CESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
             S A++A       E+    FG++LGI FQ+ DD LD   D  
Sbjct: 218 LASTAVLAGPGNEALEQTAFDFGKHLGIAFQILDDCLDITGDEK 261


>gi|258573655|ref|XP_002541009.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii
           1704]
 gi|237901275|gb|EEP75676.1| decaprenyl-diphosphate synthase subunit 1 [Uncinocarpus reesii
           1704]
          Length = 477

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++++    A++AG+ LL  A   ++ 
Sbjct: 219 RLAEITELIHTASLLHDDV--IDNAVTRRSGVSANLEFGNKMAVLAGDFLLGRASVALAR 276

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D ++    E   T       +K+ +L+ 
Sbjct: 277 LRDPEVTELMATVIANLVE--GEFMQLRNTAQDERNPAWTEDIITYYLQKTYLKSASLIS 334

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C S A++ H + +  E    +G NLG+ FQL DD+LD     E+L K
Sbjct: 335 KSCRSAALLGHGAPDVVEAAYSYGRNLGLAFQLVDDMLDYTISGEELGK 383


>gi|6319475|ref|NP_009557.1| Coq1p [Saccharomyces cerevisiae S288c]
 gi|116929|sp|P18900|COQ1_YEAST RecName: Full=Hexaprenyl pyrophosphate synthase, mitochondrial;
           Short=HPS; Flags: Precursor
 gi|171704|gb|AAA34686.1| hexaprenyl pyrophosphate synthetase (COQ1) [Saccharomyces
           cerevisiae]
 gi|536190|emb|CAA84939.1| COQ1 [Saccharomyces cerevisiae]
 gi|45270088|gb|AAS56425.1| YBR003W [Saccharomyces cerevisiae]
 gi|285810339|tpg|DAA07124.1| TPA: Coq1p [Saccharomyces cerevisiae S288c]
 gi|323310186|gb|EGA63378.1| Coq1p [Saccharomyces cerevisiae FostersO]
          Length = 473

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 43/204 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSISR 234

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------------------------- 167
                   + S  + +L     +Q        DI                          
Sbjct: 235 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 294

Query: 168 ----------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                      D+ I+    + I K  +KT AL+  +C   AI++ AS    +    FG 
Sbjct: 295 PSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGR 354

Query: 216 NLGIIFQLADDLLDCE---EDLPK 236
           NLGI FQL DD+LD     +DL K
Sbjct: 355 NLGICFQLVDDMLDFTVSGKDLGK 378


>gi|294816499|ref|ZP_06775142.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294329098|gb|EFG10741.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 397

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 94/245 (38%), Gaps = 24/245 (9%)

Query: 9   LQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT--ECASL 64
           L  N + ++T L+  L+ +  +  +      ++  +R +   GGK++R  L      A  
Sbjct: 49  LLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCICGWYAGG 108

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------- 111
              +    ++  A++E  H ++LIHDDL  MD+   RRGKPTVH                
Sbjct: 109 GAGDMAAVVQAAASLEMFHAFALIHDDL--MDHSDTRRGKPTVHRSLAAHHSALRGQEAA 166

Query: 112 ---DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  AI+ G+  L ++ E++ +             ++       + G     +    
Sbjct: 167 SHLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMYGQYLD-LCAAG 225

Query: 169 DEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           D  +D      + + KT    C      GA +A A     E    +   LG  FQL DDL
Sbjct: 226 DPTLDLDAALTVARYKTAKYTCERPLHIGASLAGAGLAVLEACTAYALPLGEAFQLRDDL 285

Query: 228 LDCEE 232
           L    
Sbjct: 286 LGVYG 290


>gi|182436056|ref|YP_001823775.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178464572|dbj|BAG19092.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 347

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   AS    +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 62  GKAIRPALVLAAASALGGDPERAVRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AII G+ +L  A  +++           ++L      +  +  +  GQ  D   
Sbjct: 120 VFGIPDAIITGDAMLALAQRLLAEDPHPAAARAVARL------SSCIIELCAGQQADCAF 173

Query: 170 EF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 174 EERGPEEVTLDECLTMATAKTGALLGCACSLGALYAGAEDRAVRAMDGFGREAGLSFQLI 233

Query: 225 DDLLDCEED 233
           DDL+    D
Sbjct: 234 DDLIGIWGD 242


>gi|315186534|gb|EFU20293.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578]
          Length = 327

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 13/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLF---NVNHLTALR 74
            + DL+ +       + +  L+  A R A    K +R   +   A             +R
Sbjct: 15  RVRDLIREELGSPSGELSSALVDLASRDA----KLLRPGCMVLSARFGVGEGEIPERVVR 70

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + AA+E +H  +L+HDD+  +D+   RRG   +H  Y    A++ G+ L   A E+++  
Sbjct: 71  LAAALEMLHMATLVHDDI--VDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVAEY 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            ++      S+ +  +      +  +   +     E     +       KTG L   A  
Sbjct: 129 ASREHAVFLSRGVRHILDGEIEEVEVRRALG---RESFSLRRYLRRILRKTGLLFVVAFH 185

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            GA  A A +    RLR  G N+G+ FQ+ DD+LD   
Sbjct: 186 LGASEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDVAG 223


>gi|213420464|ref|ZP_03353530.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 244

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 11/154 (7%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           +L+HDD+  +D   +RRGK T +  +    +++ G+ + T AF++++S  +     ++  
Sbjct: 1   TLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVL 53

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            ++S   N+  +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  
Sbjct: 54  EVMSEAVNVIAEGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPE 112

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           +++ L+ +G  LG  FQL DDLLD   D   L K
Sbjct: 113 QEKGLQDYGRYLGTAFQLIDDLLDYSADGEHLGK 146


>gi|323448818|gb|EGB04712.1| hypothetical protein AURANDRAFT_32168 [Aureococcus anophagefferens]
          Length = 320

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 11/194 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALR---VGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGKKIR+ +V   A  F      +LR   +   IE IH  SL HDD+  +D   +RRG  
Sbjct: 34  GGKKIRATMVLLTARAFRKGRGRSLRQRKLAEIIEIIHTASLFHDDV--IDGADVRRGCL 91

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +V  ++ +  A++AG+ LL  A   ++  +      + S ++  L     +Q        
Sbjct: 92  SVSAKFGDKIAVLAGDFLLARACVALAKLENLAVVELISVVIEHLVRGEIVQ---MRPES 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              D              KTG+LM  AC + A++   +Q   +    +G ++G+ FQL D
Sbjct: 149 HSSDTHTLLEAYLHKSFYKTGSLMANACRAAALLEDETQANCDAAFAYGRHVGLAFQLVD 208

Query: 226 DLLDCEE---DLPK 236
           D LD E    +L K
Sbjct: 209 DALDFEASDLELGK 222


>gi|308178200|ref|YP_003917606.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117]
 gi|307745663|emb|CBT76635.1| trans-hexaprenyltranstransferase [Arthrobacter arilaitensis Re117]
          Length = 365

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 26/229 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
            +++ +L D L  +   +       L+ A      GGK++R  LV   + L    +   +
Sbjct: 56  AKVEKLLRDALANSDPLIDASSR-HLVEA------GGKRVRPLLVLLTSLLGEGVNDDVI 108

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +  A +E  H  +L HDD+  MD+  +RRG PT H  +    AI+AG+ +   A    S 
Sbjct: 109 KAAAVVELTHLATLYHDDV--MDSAPMRRGAPTAHEVWGNSVAILAGDLIFARASVFGSE 166

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTGALMC 190
              +            +  +   + +  GQ+ +       +  +     +   KT +L+ 
Sbjct: 167 LGPEAV----------MWQSRTFERLCLGQLHESIGPREGDDVIEHHIQVISDKTASLLS 216

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
            +   GA    AS    + LR +GE +G+ FQ+ADD++D    E D  K
Sbjct: 217 TSGAFGARFGGAS-EFIDVLREYGEKVGVAFQVADDVIDLASKEADSGK 264


>gi|163745285|ref|ZP_02152645.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45]
 gi|161382103|gb|EDQ06512.1| geranyltranstransferase [Oceanibulbus indolifex HEL-45]
          Length = 294

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 87/218 (39%), Positives = 119/218 (54%), Gaps = 9/218 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           DL         + H   +  A+RYA  GGK +R FLV E A L  +    A     AIE 
Sbjct: 19  DLAQAQIEAALSAHKGPVAEAMRYACTGGKGLRGFLVIESARLHGIAPGMAAPAAGAIEA 78

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H YSL+HDDLP MD+  +RRG+PTVH ++DE TA++AG+ L T  FE+I          
Sbjct: 79  LHAYSLVHDDLPCMDDDDLRRGQPTVHRKWDEATAVLAGDALQTLTFELIGHL--PCSAE 136

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGA 197
            R  LM SL    G+ GM+GGQ LDI  E     +   ++  +Q  KTGAL+ ++  +G 
Sbjct: 137 ARLSLMTSLAGAAGVGGMVGGQALDIAAETAPAPLSLAEITALQAGKTGALIEWSAMAGP 196

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            MA A       L  + ++LG+ FQ+ADD+LD E D  
Sbjct: 197 RMAGADAT---ALGQYAKHLGLAFQIADDILDVEGDAE 231


>gi|37528167|ref|NP_931512.1| hypothetical protein plu4337 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787604|emb|CAE16709.1| crtE [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 300

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 17/228 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVT 59
           MN      L E    +   L+ +L   A       +D++ +A+R + L+ GK+IR  L+ 
Sbjct: 9   MNY--EETLLELQSALQQHLELVLPSGAP------DDKVCAAMRESTLVSGKRIRPLLLL 60

Query: 60  ECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                   N      L++ +AIE +H  SLI DDLP MDN   RRG+P +H QY E  AI
Sbjct: 61  LIVLDLGENPWKTDFLQLASAIEIVHAASLILDDLPCMDNAEYRRGRPAIHRQYGESVAI 120

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           +A   LL+ AF +I        D   +  +LS T  +GL G++ GQ  D+ +  +     
Sbjct: 121 LAAVALLSRAFGLIVETNLSEYDKSAAVAILSHT--VGLNGLVQGQFRDLNN-TLCAGNY 177

Query: 178 FMIQK---MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             I     +KTG L     +  AI  +A    ++ LR   ++LG  FQ
Sbjct: 178 HAIATTNDLKTGLLFDTTFQLAAIAVNAPDIIRQALRHVSQHLGQAFQ 225


>gi|149924019|ref|ZP_01912402.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
 gi|149815102|gb|EDM74655.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
          Length = 366

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 22/225 (9%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-- 72
            ++T L +LL    + +                 GGK+ R       A         A  
Sbjct: 57  EVETRLGELLHSRLAIIPKVGG-------HLTFAGGKRFRPMATLLAAQAAGYTCDEAWN 109

Query: 73  --LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             L + AA E +H  +L+HDD+  +D G  RRG+P   + Y    +++ G+     A + 
Sbjct: 110 DTLTIAAAGELLHTATLLHDDV--IDEGEFRRGRPAARLPYGNGLSVLTGDYCFARALQS 167

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +S        +  +  +  +      Q    G+        +D  +  ++ + KT AL+ 
Sbjct: 168 VSRLGKAAATSSMADAVTLMAEGEIAQLYAAGEWE------VDLERYTLVIERKTAALIA 221

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +     A+      +    L  +G  +G  FQ+ADD++D   D+ 
Sbjct: 222 WCT---AVAHLVEPDAAAALARYGREVGFAFQIADDIIDYTLDVE 263


>gi|291447668|ref|ZP_06587058.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291350615|gb|EFE77519.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 381

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 96  GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 153

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AII G+ +L  A  +++           ++L      +  +  +  GQ  D   
Sbjct: 154 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARL------STCVIELCAGQQADCAF 207

Query: 170 E-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 208 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 267

Query: 225 DDLLDCEED 233
           DDL+    D
Sbjct: 268 DDLIGIWGD 276


>gi|17505681|ref|NP_491588.1| COenzyme Q (ubiquinone) biosynthesis family member (coq-1)
           [Caenorhabditis elegans]
 gi|15617696|gb|AAB37678.2| Coenzyme q (ubiquinone) biosynthesis protein 1, confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 393

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 47/228 (20%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTAL--------------------------RVGAA 78
           Y   GGK +R  +     +  N     ++                          ++G  
Sbjct: 82  YFQQGGKMLRPTVSLLMGNACNSAANRSISEEYLAMLSTERSGIAAHLSVCQNQYKIGMI 141

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL+HDD+  +D    RRG  +V+  +    +++ G+ +L  A +I+ S     
Sbjct: 142 AEMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIG--- 196

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM------KTGALMCFA 192
           K NI S +         ++ ++ G+ + +     D T V  ++        KT +L   +
Sbjct: 197 KPNIISVM------ASIIEDLVLGEFMQMSTTPTDATPVDRMKAYIEKTHRKTASLFASS 250

Query: 193 CESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLD--CEED-LPK 236
           C S AI+A  S     E    +G NLGI FQLADDLLD     D + K
Sbjct: 251 CRSAAILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGK 298


>gi|297625742|ref|YP_003687505.1| Heptaprenyl diphosphate synthase component II [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921507|emb|CBL56061.1| Heptaprenyl diphosphate synthase component II [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 356

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 22/236 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +    ++  L  + L  A+    +  + +++       GGK+ R  LV   
Sbjct: 37  DEAFEAYVGDQLDAVERRLSAITLTAANPFLAEAAEHIIA------AGGKRFRPMLVAVT 90

Query: 62  ASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           + L    N   A      +E  H  SL HDD+  MD+  +RRG P+ +  Y   TAI+ G
Sbjct: 91  SQLGPQPNDAAAQIAAVVVELTHVASLYHDDV--MDDAALRRGVPSANAAYGNSTAIMVG 148

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QV 177
           + L   A   +++                         ++ GQ+ +++            
Sbjct: 149 DWLFARASNQVATLGNDFV----------RMQADTFAELVTGQIDEMRGPQPGHDAMLHY 198

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTGAL+  +   GA+ + AS+   + L  FG  +G++FQLADDL+D   D
Sbjct: 199 LNVVAGKTGALIRTSAVFGAMTSGASREVLDALAQFGMQIGVVFQLADDLMDIMSD 254


>gi|284030790|ref|YP_003380721.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
 gi|283810083|gb|ADB31922.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
          Length = 357

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 90/256 (35%), Gaps = 30/256 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +  +P+++Q        +    L +    +  Q     + A R A  GGK++R       
Sbjct: 5   DADIPTEVQRALTEFLDLQQQRLAEIGPELAEQ-----VQAARDATSGGKRLRPSFCYWG 59

Query: 62  ASLFNVNHLT-ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY--------- 111
                 +     L   A++E +H  +L+HDD+  MD+  +RRG P  H ++         
Sbjct: 60  FRAAGGDPERPILTAAASLEMLHVSALVHDDV--MDSSDVRRGAPAAHKRFEALQRARTE 117

Query: 112 -----------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
                          AI+ G+  L +A E++ +         R+             G  
Sbjct: 118 ASGTGGDPVGFGIGAAILLGDLCLIWADEMMHTSGFDAAALARASKFFDAVRVEVTAGQY 177

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              +     E  D  +   + + K+    +      GA +    Q   + L  +G  LG 
Sbjct: 178 LDLVAQASGEA-DMDRALRVLRYKSATYTVERPLHIGAALGGGDQYLIDALSAYGLPLGE 236

Query: 220 IFQLADDLLDCEEDLP 235
            FQL DDLL    D  
Sbjct: 237 AFQLRDDLLGVFGDPG 252


>gi|221134874|ref|ZP_03561177.1| Geranylgeranyl pyrophosphate synthase [Glaciecola sp. HTCC2999]
          Length = 188

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 8/150 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK++R  L    A    + +     + A IE IH  +L+HDD+  +D   +RRG+ T +
Sbjct: 47  GGKRLRPLLCVLSAQALGITNQQHHHLAAIIEFIHTATLLHDDV--VDESLLRRGRETAN 104

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    +++ G+ L + AF+++        DN++   +LS   N   QG +  Q++++ 
Sbjct: 105 ALFGNQASVLVGDFLYSRAFQMMVEL-----DNMKVMRILSDATNRIAQGEVM-QLMNVN 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAI 198
           D    E   F +   KT  L   A +  A+
Sbjct: 159 DPNTTEQSYFDVIYSKTARLFEAATQLAAV 188


>gi|218961607|ref|YP_001741382.1| putative geranyltranstransferase [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730264|emb|CAO81176.1| putative geranyltranstransferase [Candidatus Cloacamonas
           acidaminovorans]
          Length = 303

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 16/231 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           L    +   + ID  L + L       + ++   L  AI  A++ GGK+ R  L+     
Sbjct: 13  LQKYFESRFELIDQELKNALT-----FEDKYATELKKAIYEAVIPGGKRWRPLLLLSMFE 67

Query: 64  LFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +            AL+   AIE +H  +++HDDLPS+ N   RRG+P +HI+Y    AI+
Sbjct: 68  MLTGFKKHRTFPDALKSSVAIELLHNGAIVHDDLPSVMNRTQRRGQPALHIKYGNAIAIL 127

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM--LDIQDEFIDETQ 176
           A + L + A+EIIS  K         + +  L++     GM+GGQ+  L  + + +    
Sbjct: 128 AADALYSLAYEIISELKN---PEQSLEAIRILSNATKSYGMIGGQVVALSSRHKVMKINT 184

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +  I   K G+L+  + +   +++ A +   + +R +  NLGI +Q+ +D+
Sbjct: 185 LNYIDMKKVGSLLQASADIACLLSRADEETHQVMRAYALNLGIAYQMIEDI 235


>gi|153807183|ref|ZP_01959851.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185]
 gi|149130303|gb|EDM21513.1| hypothetical protein BACCAC_01461 [Bacteroides caccae ATCC 43185]
          Length = 324

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 8/182 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  LV   A L+ V     L    ++E +H  SL+HDD+  +D    RRG+ +V+ 
Sbjct: 45  GKMMRPILVLLVARLYGVVSPATLHAAVSLELLHNASLVHDDV--VDESTERRGQLSVNA 102

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   A++ G+ LL  +        +     + S L   L     L      Q+ ++ +
Sbjct: 103 IFNNKVAVLTGDYLLATSLVHAELTNSHQIIRLVSSLGQDLADGELL------QLSNVSN 156

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               ET  F + + KT AL      + A     S+ E +  R  GE +GI FQ+ DD+ D
Sbjct: 157 HSFSETVYFDVIRKKTAALFAACTAAAAYSVGVSEEEVKLARLLGEYIGICFQIKDDIFD 216

Query: 230 CE 231
             
Sbjct: 217 YF 218


>gi|62959217|gb|AAY23716.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP839]
          Length = 145

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 4/146 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MDN  +RRG+PT HI +DE TAI+AG+ L T AF  ++     L D +R  ++ 
Sbjct: 1   HDDLPGMDNDDLRRGRPTAHIAFDEATAILAGDALQTLAFGWLAEA-PGLDDQVRLAMVR 59

Query: 149 SLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQN 205
            L    G QGM GGQ +D++   + +   Q+  + + KTGAL+  +   GA+ A   +++
Sbjct: 60  ELATASGHQGMAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATEVNED 119

Query: 206 EKERLRCFGENLGIIFQLADDLLDCE 231
           +   L  + + LG+ FQ+ DD+LD E
Sbjct: 120 QLAALTVYSQTLGLAFQVHDDILDVE 145


>gi|300858828|ref|YP_003783811.1| geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686282|gb|ADK29204.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302331089|gb|ADL21283.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276777|gb|ADO26676.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis I19]
          Length = 393

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 31/214 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK+IR           N      +    L   +++E I   +LIHDD+  +D   
Sbjct: 77  FVLGGGKRIRPSYAWAGFLAGNGLEGTEDPEAVLASISSLELIQACALIHDDI--IDASD 134

Query: 100 IRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG+PTVH                  + E  AI+ G+    +A ++  +         R
Sbjct: 135 SRRGQPTVHRSAEACHRDNSWNGDSAHFGESIAILLGDLAFAWADDMFRTSGLSDAAIAR 194

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIM 199
           +    S         ++GGQ+LD+  E      + +   + + KT A  +      GA +
Sbjct: 195 T----SNAWRGMRTEVIGGQLLDVFLESAGSESIELAENVNRFKTAAYTIERPLHIGAAI 250

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A A +     LR +G ++G+ +QL DDLL    D
Sbjct: 251 AGADERIVHALRDYGRDIGVAYQLRDDLLGVFGD 284


>gi|158604961|gb|ABW74777.1| bifunctional short chain isoprenyl diphosphate synthase
           [Campylobacter concisus 13826]
          Length = 297

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 12/169 (7%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                +L++ A IE IH  SL+HDD+  +D   IRRGKP+++  +    +++ G+ L + 
Sbjct: 43  GESEISLKLCAIIELIHLASLLHDDV--IDEANIRRGKPSINALFGSKNSVMLGDILYSK 100

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A+  ++     +     + ++      + +  M+  +M +  +E  +E +   +   KT 
Sbjct: 101 AYFELTKFDPSI-----AAVISDAVSKLSIGEMMDVKMAENFNE--NEQEYLKMIYYKTA 153

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            L+      GA +A     + E+   +G+NLG+ FQ+ DD+LD  +D  
Sbjct: 154 VLIEATAICGAKLAG---KDSEKFGLYGKNLGLAFQIVDDILDITQDEK 199


>gi|239990653|ref|ZP_04711317.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 11379]
          Length = 349

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 64  GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 121

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AII G+ +L  A  +++           ++L      +  +  +  GQ  D   
Sbjct: 122 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARL------STCVIELCAGQQADCAF 175

Query: 170 E-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 176 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 235

Query: 225 DDLLDCEED 233
           DDL+    D
Sbjct: 236 DDLIGIWGD 244


>gi|255722599|ref|XP_002546234.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Candida tropicalis MYA-3404]
 gi|240136723|gb|EER36276.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Candida tropicalis MYA-3404]
          Length = 480

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 37/194 (19%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ LL  A   I+ 
Sbjct: 188 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 245

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ---------------------------GMLGGQMLD 166
            +      + S  + +L     +Q                           G +  ++ D
Sbjct: 246 LRNPEVIELLSTTIANLVEGEFMQLKNTVIQNNNDDQIVNDGEVKEIPRPTGKVPTKLHD 305

Query: 167 IQDEFIDE--------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
                +D                 +KT +LM  +C + A+++ A  +  E    FG NLG
Sbjct: 306 YSVRTVDHETNVDAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDVIENCYSFGRNLG 365

Query: 219 IIFQLADDLLDCEE 232
           + FQ+ DD+LD   
Sbjct: 366 LCFQIVDDMLDYTS 379


>gi|239944197|ref|ZP_04696134.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 15998]
          Length = 347

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 13/189 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  LV   A     +   A+R   A+E  H ++L+HDD+  +D    RR +PT   
Sbjct: 62  GKAIRPALVLAAARALGGDPERAIRAAVAVELAHNFTLLHDDV--IDEDTTRRHRPTAWA 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    AII G+ +L  A  +++           ++L      +  +  +  GQ  D   
Sbjct: 120 VFGVPDAIITGDAMLALAQRLLAEDAHPAAAPAAARL------STCVIELCAGQQADCAF 173

Query: 170 E-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E      +   +   +   KTGAL+  AC  GA+ A A       +  FG   G+ FQL 
Sbjct: 174 EERGPDEVTLDECLTMATAKTGALLGCACALGALYAGAEDRAVRAMDGFGREAGLSFQLI 233

Query: 225 DDLLDCEED 233
           DDL+    D
Sbjct: 234 DDLIGIWGD 242


>gi|213026630|ref|ZP_03341077.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 162

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 72/161 (44%), Positives = 98/161 (60%), Gaps = 4/161 (2%)

Query: 35  HNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            N  ++ A++Y ALLGGK++R FLV     +F V+  T     AA+ECIH YSLIHDDLP
Sbjct: 2   QNTPVVEAMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLP 61

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLMLSLTH 152
           +MD+  +RRG PT HI++ E  AI+AG+ L T AF IIS  P  ++ D  R  ++  L +
Sbjct: 62  AMDDDDLRRGLPTCHIKFGEANAILAGDALQTLAFTIISDAPMPEVADRDRIAMIAELAN 121

Query: 153 NIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCF 191
             G+ GM GGQ LD+  E   I    +  I + KTGAL+  
Sbjct: 122 ASGIAGMCGGQALDLAAEGQRITLDALERIHRHKTGALIRA 162


>gi|302206535|gb|ADL10877.1| Putative geranylgeranyl pyrophosphate synthase [Corynebacterium
           pseudotuberculosis C231]
          Length = 372

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 31/214 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK+IR           N      +    L   +++E I   +LIHDD+  +D   
Sbjct: 56  FVLGGGKRIRPSYAWAGFLAGNGLEGTEDPEAVLASISSLELIQACALIHDDI--IDASD 113

Query: 100 IRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG+PTVH                  + E  AI+ G+    +A ++  +         R
Sbjct: 114 SRRGQPTVHRSAEACHRDNSWNGDSAHFGESIAILLGDLAFAWADDMFRTSGLSDAAIAR 173

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIM 199
           +    S         ++GGQ+LD+  E      + +   + + KT A  +      GA +
Sbjct: 174 T----SNAWRGMRTEVIGGQLLDVFLESAGSESIELAENVNRFKTAAYTIERPLHIGAAI 229

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A A +     LR +G ++G+ +QL DDLL    D
Sbjct: 230 AGADERIVHALRDYGRDIGVAYQLRDDLLGVFGD 263


>gi|268565995|ref|XP_002639605.1| C. briggsae CBR-COQ-1 protein [Caenorhabditis briggsae]
 gi|187029454|emb|CAP31310.1| CBR-COQ-1 protein [Caenorhabditis briggsae AF16]
          Length = 392

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 91/224 (40%), Gaps = 39/224 (17%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALR--------------------------VGAA 78
           Y   GGK +R  +     +  N     ++                           +G  
Sbjct: 81  YFQQGGKMLRPTVSLLMGNACNSAMNRSIPEEQIAIPISERSAISSHLIVCQNQYKIGMI 140

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL+HDD+  +D    RRG  +V+  +    +++ G+ +L  A +I+ S     
Sbjct: 141 AEMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGKPN 198

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESG 196
              + + ++  L     + G      +   +    +  V  I+K   KT +L   +C S 
Sbjct: 199 VIAVMASIIEDL-----VLGEFMQMSVTPSEATPSQRMVAYIEKTHRKTASLFASSCRST 253

Query: 197 AIMAHASQ-NEKERLRCFGENLGIIFQLADDLLD--CEED-LPK 236
           AI+A +S  N  +    +G NLGI FQLADDLLD     D + K
Sbjct: 254 AILADSSNSNLHQTAYEYGRNLGIAFQLADDLLDFIATSDEMGK 297


>gi|307719658|ref|YP_003875190.1| heptaprenyl diphosphate synthase component II [Spirochaeta
           thermophila DSM 6192]
 gi|306533383|gb|ADN02917.1| heptaprenyl diphosphate synthase component II [Spirochaeta
           thermophila DSM 6192]
          Length = 327

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 13/218 (5%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLF---NVNHLTALR 74
            + DL+ +       + +  L+  A R A    K +R   +   A             +R
Sbjct: 15  RVRDLIREELGSPSGELSSALVDLASRDA----KLLRPGCMVLSARFGVGEGEIPERVVR 70

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + AA+E +H  +L+HDD+  +D+   RRG   +H  Y    A++ G+ L   A E+++  
Sbjct: 71  LAAALEMLHMATLVHDDI--VDDAATRRGGAALHRAYGVKEAVLMGDLLFAKALELVAEY 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            ++      S+ +  +    G    +  +    +D F    +       KTG L   A  
Sbjct: 129 ASRDHAVFLSRGVRHILD--GEIEEVEVRRALGRDAF-SLRRYLRRILRKTGLLFVVAFH 185

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            GA  A A +    RLR  G N+G+ FQ+ DD+LD   
Sbjct: 186 LGASEAGAEEEVVRRLRRIGYNVGMAFQVIDDVLDVAG 223


>gi|171914615|ref|ZP_02930085.1| polyprenyl synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 589

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 14/209 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-----R 74
           LD LL +     +    + L  A       G + R FL          +    L     +
Sbjct: 247 LDALLGKPHDRTEEIAREWLARA-------GNRWRPFLTVASYQALREDPEGPLSDDLKK 299

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              A+EC H  SL+HDD+   DN   R G+ T+H ++    A+  G+ L+   + +++  
Sbjct: 300 AAIAVECFHKASLVHDDIE--DNDAQRYGEATLHAEHGMPVALNVGDLLIGEGYRLLADS 357

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
             +         + +       +G     + +     +  TQV  I + KT      A +
Sbjct: 358 NVRADYRTAMLKIAAEGQRELCRGQGAELLWNNHPVALSSTQVLEIFRSKTAPAFEVALK 417

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQL 223
            GA ++      +E L  + E LGI +Q+
Sbjct: 418 IGAALSGRLDEVEEALHEYSEALGIAYQI 446


>gi|269836542|ref|YP_003318770.1| polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269785805|gb|ACZ37948.1| Polyprenyl synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 321

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 15/224 (6%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S ++ +  R++  L +  ++       +    L+ A      GGK++R  L+   A  FN
Sbjct: 3   SVMRADVARVEDRLRE-EVRVDFPFVGEILQGLIEA------GGKRLRPLLLLLAARPFN 55

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 L     +E +H  SLIHDD  ++D   +RRG+PT++  ++  T I+ G+ +   
Sbjct: 56  YVFERLLPAAVGVELLHTASLIHDD--TVDKAMLRRGRPTLNSLFNTETVILLGDYIFAR 113

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           +  + ++ +     N R   + + +      G L  ++   ++              KT 
Sbjct: 114 SAMMAAATQ-----NPRVVQVFASSLAHICDGQLR-EIFTARELQQSIDDYRKRIFGKTA 167

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +L   + E GAI+  A+  + + LR FG +LG+ FQ+ DD+LD 
Sbjct: 168 SLFAGSAEMGAILGEANDEQIDALRRFGGHLGMAFQIVDDVLDL 211


>gi|212544820|ref|XP_002152564.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium
           marneffei ATCC 18224]
 gi|210065533|gb|EEA19627.1| hexaprenyl pyrophosphate synthetase Coq1, putative [Penicillium
           marneffei ATCC 18224]
          Length = 459

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 7/161 (4%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + + Q+    A++AG+ LL  A   ++ 
Sbjct: 201 RLAEITELIHTASLLHDDV--IDNAVTRRSSNSANTQFGNKMAVLAGDFLLGRASVALAR 258

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      + + ++ +L    G    L     D +     +           +KT +L+ 
Sbjct: 259 LRNPEVIELLATVIANLVE--GEFMQLKNTASDERSPVFTDDTIAYYLQKTYLKTASLIS 316

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            +C + A++ +++    E    +G NLG+ FQL DD+LD  
Sbjct: 317 KSCRATALLGNSTPEIVEAAYSYGRNLGLAFQLVDDMLDYT 357


>gi|7416783|dbj|BAA94032.1| phytoene synthase [Rubrivivax gelatinosus]
          Length = 310

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTA 72
           RI+  L+  L+            +L +AIR+A+  GG +IR  L    A    + +   A
Sbjct: 6   RIEQALEAALVANEG---AGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPALA 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               +AIE IHC SL+HDDLP  D+   RRG+P+VH  Y E  A++AG+ L+  AF+ + 
Sbjct: 63  DAAASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLG 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +   +  + + + ++ ++   +G   G++ GQ  + +        +   Q+ KTGAL   
Sbjct: 123 AAGGRHPERM-AHVLQTVARGVGTPLGIIAGQAWECE----PRVALSDYQRAKTGALFAA 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A  +GA  +         L   G+ LG  +Q+ADD+ D   D
Sbjct: 178 ATAAGAQASGGDGETWRAL---GDWLGEAYQVADDVRDALAD 216


>gi|156848549|ref|XP_001647156.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117840|gb|EDO19298.1| hypothetical protein Kpol_1036p41 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 471

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 84/213 (39%), Gaps = 46/213 (21%)

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N       R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL 
Sbjct: 168 NGILPKQRRLAEIVEMIHTASLLHDDV--IDHSETRRGRPSGNKAFTNKMAVLAGDFLLG 225

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----------- 174
            A   IS  +      + S  + +L    G    L    +D     IDE           
Sbjct: 226 RATVSISRLRNPEVVELMSNSIANLVE--GEFMQLKNTAVDNNLNTIDEGRKELPPSIGK 283

Query: 175 ----------------------------TQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
                                               +KT +L+  AC S AI++ AS   
Sbjct: 284 FTNDLHDYRVPINDNLLTSKDAMINTAFEYYLHKTYLKTASLISMACRSSAILSGASPEV 343

Query: 207 KERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +    +G+NLGI FQL DD+LD     E+L K
Sbjct: 344 VDSCYEYGKNLGICFQLVDDMLDFTVSSENLGK 376


>gi|164690689|dbj|BAF98639.1| geranylgeranyl diphosphate synthase [Streptomyces argenteolus]
          Length = 360

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 26/249 (10%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASL 64
           + L+E  + ++ +L + + Q  + +    +    + +   + L GGK+IR+ L       
Sbjct: 10  AYLEEVRQPVNAVLREFIEQQQNSIPPDVDIGPAVRALGDFVLHGGKRIRAALCYWGWRG 69

Query: 65  FNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------- 110
                     A R  AA+E  HC+ LIHDD+  +D    RRG+P++H Q           
Sbjct: 70  AGGGDEDLTSAYRAAAALEVCHCFGLIHDDI--IDGTATRRGRPSLHCQLASLHEQAGWH 127

Query: 111 -----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                +   +A++ G+  L +A E++++  ++ +  +  +L  S      + G +   ++
Sbjct: 128 GDAAAFGRSSALLMGDLCLFWADELLTTACSEER-LVEVRLEYSGMRVAEVCGQMLEMIV 186

Query: 166 DIQDEFIDETQVFMIQKMKTGALM-CFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
               +F D +    +   KT         + G  +A +S   ++    FG  LG  FQL 
Sbjct: 187 QASRDF-DVSSGMTVAHYKTAKYATERPLQIGGRLAGSSAELRKSYAAFGLPLGEAFQLR 245

Query: 225 DDLLDCEED 233
           DD+L    D
Sbjct: 246 DDILGVFGD 254


>gi|169629079|ref|YP_001702728.1| polyprenyl synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169241046|emb|CAM62074.1| Probable polyprenyl synthetase [Mycobacterium abscessus]
          Length = 314

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           L GGK++R             +        LRV AA+E +H  +LIHDD+  +D+   RR
Sbjct: 2   LRGGKRLRPAFAYWGWRAITDDPDPWNPEVLRVCAALELLHTCALIHDDV--IDSSATRR 59

Query: 103 GKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           G+PT+H+                Q+    AI+ G+  LT+A +++   +   + ++R++ 
Sbjct: 60  GEPTIHVEFAALHRENGWSGSPEQFGISAAILLGDLALTWADDMVVGAQLSPEAHVRARG 119

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---MIQKMKTG-ALMCFACESGAIMAHA 202
           + S+  +     +LGGQ LDI  E   +  V     + + KT    +    + G  +A  
Sbjct: 120 VWSILRS----EVLGGQYLDILSESSGDESVETALRVIRFKTAGYTVQRPLQLGVAIAGE 175

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +      L   G ++GI FQL DD+L    D
Sbjct: 176 NAEISRLLGDVGLDIGIAFQLRDDVLGVFGD 206


>gi|281204751|gb|EFA78946.1| trans-prenyltransferase [Polysphondylium pallidum PN500]
          Length = 902

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 32/232 (13%)

Query: 21  DDLLLQTASHM----QTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTA-- 72
            DLLL T S +    + Q ND LL+ I   L  L GKK R  ++   + +       +  
Sbjct: 41  KDLLLLTNSILNELSKNQENDSLLNKISCLLFNLKGKKTRPTVIFLLSKILENEKTKSNS 100

Query: 73  -LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            L++    E  H  SLIHDD+  +D    RR + TV+  Y    AI  G+ +L+ +  I+
Sbjct: 101 FLKLAMVAEMFHTASLIHDDV--IDGSDTRRDEKTVNTLYSNRMAITGGDFILSKSMVIL 158

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
            S +     N+R    +S      L  ++ G++L +Q   +   +      +KT ++   
Sbjct: 159 GSIR-----NVRVAKSMSNV----LGDLVDGELLQLQGNGLSFEKYLQKSYLKTSSMFSN 209

Query: 192 ACESGAIMA------------HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            C+S A++                +   E    FG  +GI FQ+ DDLLD  
Sbjct: 210 CCKSVALLGIHDDDDDIGSSIKIDEKTVELCFQFGTYIGIAFQIIDDLLDFT 261


>gi|300741252|ref|ZP_07071273.1| polyprenyl synthetase [Rothia dentocariosa M567]
 gi|300380437|gb|EFJ76999.1| polyprenyl synthetase [Rothia dentocariosa M567]
          Length = 380

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 36/267 (13%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV 58
           ++ G+ S+ +   + ++  + +   Q  + +    +D   LL AI     GGK++R+ L 
Sbjct: 10  LSDGVKSEQEAYLRAVEATMSEFFAQQRTLLTAISHDALPLLEAIESLSSGGKRLRALLS 69

Query: 59  TECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ- 110
                                +R GAA+E     +LIHDD+  +D    RRGKP+VH + 
Sbjct: 70  YWGWRGAGGESILERSAPTPIIRAGAALELFQSAALIHDDI--IDRSDTRRGKPSVHKKF 127

Query: 111 ---------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
                          Y     IIAG+  L+++ ++ SS          ++ +        
Sbjct: 128 ETQHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARNIFDTMRTEV 187

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA---------SQNE 206
           + G     + ++      E  +    ++       ++CE   ++  A             
Sbjct: 188 MAGQYLDVLSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGALALTAIAHQDHPI 247

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
            E+ R FG  LG  FQL DD L    +
Sbjct: 248 LEKYRAFGLPLGEGFQLRDDELGVFGE 274


>gi|322489859|emb|CBZ25120.1| putative farnesyl synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 359

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 35/224 (15%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLF---------------------NVNHLTA 72
           +N+ L  A +Y L  GGK +R  LV   A                            L  
Sbjct: 50  NNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSARLLEEPIGPLDEVTPGTILPF 109

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+    E IH  SL+HDD+  +D    RRG+P +H  YD   A++AG+ +L  A   I+
Sbjct: 110 LRLAEVTELIHTASLVHDDV--IDKTDTRRGRPALHKVYDTKRAVLAGDYILARASFYIA 167

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           + +       R  ++++        G L            D  +       KT +L+  +
Sbjct: 168 TLQVP-----RIVILMTTALEELTSGELIQMDGCF-----DIPRYEQKSFCKTASLIANS 217

Query: 193 CESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
             S A++A       E+    FG++LGI FQ+ DD LD   D  
Sbjct: 218 LASTAVLADPGNEALEQTAFDFGKHLGIAFQILDDCLDITGDEK 261


>gi|149176626|ref|ZP_01855238.1| polyprenyl synthetase [Planctomyces maris DSM 8797]
 gi|148844505|gb|EDL58856.1| polyprenyl synthetase [Planctomyces maris DSM 8797]
          Length = 611

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 94/243 (38%), Gaps = 20/243 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALL--GGKKIRSFLVTECASL 64
           ++  +   +   D +L    +  +      L    AI Y  L  GGK+ R F+       
Sbjct: 253 MRAANALFEDNFDQILPPLRTKTEAAARTPLGKTEAISYDWLKHGGKRFRPFITLAAYDA 312

Query: 65  F------NVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
                  +    T           AIE  H  SLIHDD+   D+   R G+ T+H Q+  
Sbjct: 313 LIKAQQADDTAETTYPLGVQKAAMAIEVFHKASLIHDDIE--DDDQYRYGRETLHRQHGT 370

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG-QMLDIQDEFI 172
             AI  G+ L+   + +++  +  +     S L+  ++          G +M   + E  
Sbjct: 371 GMAINIGDYLIGVGYRLLNEARADIGAEAASDLIEKMSAAHIRLCEGQGAEMAWQESETF 430

Query: 173 DETQV--FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   +    I  +KT      A  +G  M  +    +E +  F  ++G+ FQ+ +DL D 
Sbjct: 431 ELAPLDALQIYALKTSPAFEAALYAGIRMTGSVGEYEELISSFSRHIGVGFQILNDLKDW 490

Query: 231 EED 233
           + D
Sbjct: 491 QGD 493


>gi|295698494|ref|YP_003603149.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola
           USDA]
 gi|291157286|gb|ADD79731.1| octaprenyl-diphosphate synthase [Candidatus Riesia pediculicola
           USDA]
          Length = 318

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GKKIR  +    + +        +   + IE IH  +L+HDD+  +D+  IRRG+    I
Sbjct: 44  GKKIRPIITLLFSKILGYRGKKDIIAASLIEFIHIATLLHDDI--IDSSIIRRGRKKSSI 101

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    +++ G+ +   + ++I    ++   N+ S+ +           ++ G++L + +
Sbjct: 102 VFGNEISVLVGDFVYAKSLKMIVGLNSKKVLNLISKTV---------HMIIEGEILQLSN 152

Query: 170 EF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               I +     I   KT +L   A      + +   ++K  L+ +G + G  FQL +D+
Sbjct: 153 RTLEISQETYMKIIYQKTSSLFETAAYILTFICNVDSDKKIALKNYGRHFGNAFQLINDI 212

Query: 228 LDCE 231
            D +
Sbjct: 213 KDYQ 216


>gi|302869226|ref|YP_003837863.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302572085|gb|ADL48287.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 355

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 23/214 (10%)

Query: 39  LLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMD 96
           + +A+R + L GGK++R          F       + V AA +E  H ++LIHDD+  +D
Sbjct: 40  VHTAVRWFVLAGGKRMRPLFCYWGWRGFGGPDAAPIVVAAASLELFHAFALIHDDI--VD 97

Query: 97  NGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
               RRG PT+H                  Y    A++ G+   T++ ++        + 
Sbjct: 98  RSDRRRGAPTLHRFFAELHAASGWPGDPVAYGRQAAVLCGDLCATWSAQMFHGCGLPPER 157

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIM 199
             R  ++L+   +  + G     +    D  +       + ++KT    +    + GA +
Sbjct: 158 LRRGHVLLARMRSEVIAGEYLDVVGAAGDGSV--ANALTVVRLKTARYTVTRPVQIGAAL 215

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A A+  E   L  FG+ LG  FQL DDLL    D
Sbjct: 216 AGAAPEEVAALAGFGDPLGDAFQLRDDLLGVFGD 249


>gi|148274072|ref|YP_001223633.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147832002|emb|CAN02974.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 340

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 94/239 (39%), Gaps = 23/239 (9%)

Query: 17  DTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTAL 73
           + +LD    ++    +   ++  +L   +     GGK+ R  +V          +   A 
Sbjct: 2   NGVLDAFFARSLVRAEVMGDEYVKLWRTLESNTAGGKRFRPRMVMAAYDGLGGQDVQAAA 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-----------------DEVTA 116
            VGAA E +H   ++HDD+  +D  + RRG P V   Y                     A
Sbjct: 62  HVGAAFEMLHTALIVHDDV--IDRDFTRRGGPNVSGAYRDIATTQGLPQPLAEHRGMSAA 119

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           +IAG+  L  A+ +I +   +         +L         G L      +  +     +
Sbjct: 120 VIAGDLALVNAYRLIDASGVRDLTRSHLMEILDDAVFASAAGELIDVEFSLTADVPSVDE 179

Query: 177 VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +  ++++KT         ++GA++A AS      L  FG ++GI +Q+ DD+L    D 
Sbjct: 180 ILRMERLKTAVYSFEAPLQAGAVLAGASPAIVSALGDFGRDIGIAYQVVDDVLGVFGDE 238


>gi|149920952|ref|ZP_01909413.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1]
 gi|149818224|gb|EDM77679.1| polyprenyl synthetase [Plesiocystis pacifica SIR-1]
          Length = 589

 Score =  141 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 15/220 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLT--ALRVGAAIE 80
           L +  + +     +    A  Y    GGK+ R  L    A           AL + A +E
Sbjct: 285 LERALAELTDTRCETFAEASSYLQAQGGKRARPLLTLSAAEACGGADEAQRALGLAAGVE 344

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+  +D   +RRG+  +H       A      +       +      +  
Sbjct: 345 WLHQGSLLLDDI--VDAAELRRGRQALHAATSPTFAAGVATFVFAR----VVRASQGMHP 398

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            IRS L+ S       + +   +  + +   +  T  + I   KT +L   A E GA   
Sbjct: 399 EIRSALVNSAATLAEGERLELQRTGEAE---LPRTDYYAIIAAKTASLFACAVEVGARAV 455

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            A + +   L  +G  LG+ FQ+ DD+LD   +     K+
Sbjct: 456 GAPRGQVRALIRYGRELGLAFQIIDDVLDYVGEARVFGKR 495


>gi|159901006|ref|YP_001547253.1| polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894045|gb|ABX07125.1| Polyprenyl synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 339

 Score =  141 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 6/186 (3%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R        +    +   A  + AAI+ +H +SLIHDD+   D+   RRG+ TV  
Sbjct: 50  GKLLRPRFCLLACAAVGGDPQQAEPLAAAIQLLHDFSLIHDDIE--DHSPTRRGRETVWK 107

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            ++   AI  G+G+ T A   +        ++     +     N  +  +  GQ LD+  
Sbjct: 108 LWEVPQAINVGDGMFTLAQLSLFRLAEVGVESSVVVEIARRF-NQTIIRLCEGQYLDMSF 166

Query: 170 E---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E    I E     +   KT AL+  A   GAI+ +A++ +   L  +GE LG+ FQ+ DD
Sbjct: 167 EQRLDISEGDYLAMISRKTAALIAAAAGLGAILGNANREQAAALYNWGEALGLAFQIEDD 226

Query: 227 LLDCEE 232
           +L    
Sbjct: 227 MLGIWG 232


>gi|307128579|ref|YP_003880609.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483041|gb|ADM89911.1| polyprenyl synthetase [Candidatus Sulcia muelleri CARI]
          Length = 326

 Score =  141 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 8/182 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR   +     +          +   +E +H  SLIHDD+  +D    RRG  +++ 
Sbjct: 47  GKYIRPIFIFLITKMLGNICKKTYDLAYLVELMHTASLIHDDV--IDFSTTRRGVLSINA 104

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   TA+I G+ + + +  I      +   NI S+ +  ++           Q+     
Sbjct: 105 IWQNKTAVIFGDYIFSKSLNIAIKNNYKDYLNIISKTIEKMSEGEIF------QIEYFHK 158

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             I++     I   KT  ++   CE GA   +  +     ++ FGE  G+ FQ+ DDLLD
Sbjct: 159 MNINKYIYEKIIFKKTAIMIGACCEGGARSINKKKKIILEIKKFGELAGMAFQIKDDLLD 218

Query: 230 CE 231
            E
Sbjct: 219 YE 220


>gi|154334614|ref|XP_001563554.1| farnesyl synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060575|emb|CAM42123.1| putative solanesyl-diphosphate synthase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 359

 Score =  141 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 35/224 (15%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLF---------------------NVNHLTA 72
           +N+ L  A +YAL  GGK +R  LV   A                            L  
Sbjct: 50  NNEVLDHAGKYALAAGGKLMRPALVALMAHAMLPLDVSARLLEEPIGSLDEVTPGTILPF 109

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+    E IH  SL+HDD+  +D+  +RRG+P +H  YD   A++AG+ +L  A   I+
Sbjct: 110 LRLAEVTELIHTASLVHDDV--IDSSDMRRGRPALHKVYDTKRAVLAGDYILARASFYIA 167

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           + +       R  ++++      + G L            D  +       KT +L+  +
Sbjct: 168 TLQVP-----RIVILMTTALEELMSGELLQMDGCF-----DIPRYEQKSFCKTASLISNS 217

Query: 193 CESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
             S A++        E+    FG +LGI FQ+ DD LD   D  
Sbjct: 218 LASTAVLVDPGNEALEQTAFDFGRHLGIAFQILDDCLDITGDEK 261


>gi|29893480|gb|AAO93113.1| geranylgeranyl pyrophosphate synthetase [Rubrivivax gelatinosus]
          Length = 310

 Score =  141 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASL-FNVNHLTA 72
           RI+  L+  L+            +L +AIR+A+  GG +IR  L    A    + +   A
Sbjct: 6   RIEQALEAALVANEG---AGCPPKLAAAIRHAVFPGGARIRPQLCIAVAMANGDTDPALA 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
               +AIE IHC SL+HDDLP  D+   RRG+P+VH  Y E  A++AG+ L+  AF+ + 
Sbjct: 63  DAAASAIELIHCASLVHDDLPCFDDAPTRRGQPSVHKAYGERLAVLAGDALIVTAFQTLG 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +   +  + + + ++ ++   +G   G++ GQ  + +        +   Q+ KTGAL   
Sbjct: 123 AAGGRHPERM-AHVLQTVARGVGTPLGIIAGQAWECE----PRVALSDYQRAKTGALFAA 177

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A  +GA  +         L   G+ LG  +Q+ADD+ D   D
Sbjct: 178 ATAAGAQASGGDGETWRAL---GDWLGEAYQVADDVRDALAD 216


>gi|308499861|ref|XP_003112116.1| CRE-COQ-1 protein [Caenorhabditis remanei]
 gi|308268597|gb|EFP12550.1| CRE-COQ-1 protein [Caenorhabditis remanei]
          Length = 396

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 48/275 (17%)

Query: 2   NGGLPSKLQENSKRIDT-ILDDLLLQTASHMQTQHNDR-----LLSAIRYALL-GGKKIR 54
           +    + +QE+ K++ + I+D L+ Q A+       D      L     Y    GGK +R
Sbjct: 35  SFASTAFVQEHVKQMQSDIMDQLIPQDATGAVENLADLNVTSNLGRMTHYYFQQGGKMLR 94

Query: 55  SFLVTECASLFNVNHLTAL--------------------------RVGAAIECIHCYSLI 88
             +     +  N     ++                          ++G   E IH  SL+
Sbjct: 95  PTVSLLMGNACNSATNRSISDDLLAVPSSDRSGIATHLTVCQNQYKIGMIAEMIHTASLV 154

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG  +V+  +    +++ G+ +L  A +I+ S       ++ + ++ 
Sbjct: 155 HDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGKPNVISVMASIIE 212

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCFACESGAIMAHASQ- 204
            L     +      QM     E   + +          KT +L   +C S AI+A  +  
Sbjct: 213 DLVLGEFM------QMSATPSEATPQQRMNAYIEKTHRKTASLFASSCRSTAILADPNNL 266

Query: 205 NEKERLRCFGENLGIIFQLADDLLD--CEED-LPK 236
           N  +    +G NLGI FQLADDLLD     D + K
Sbjct: 267 NLHQTAYEYGRNLGIAFQLADDLLDFIATSDEMGK 301


>gi|40882370|dbj|BAD07374.1| farnesyl diphosphate synthase [Actinoplanes sp. A40644]
          Length = 362

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 80/211 (37%), Gaps = 25/211 (11%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHL-----TALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK+IR             +         L   +  E +H   LIHDD+  +D   
Sbjct: 47  FVLRGGKRIRPTFAWLGWIGAGGDPEGPGAEAVLSACSGFELLHAAGLIHDDI--IDASR 104

Query: 100 IRRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG P  HI Y                   TAI+ G+  L +A  ++   +       R
Sbjct: 105 TRRGHPAAHITYAERHRASRFSGDSQIFGTGTAILIGDLALIWADVLVRGSRLPADAQAR 164

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHA 202
              + S   +  + G L   +   +D+  D      + + KT    +    + GA +A A
Sbjct: 165 VSPVWSAVRSEVMYGQLLDLISQARDDE-DVDAALRVNRYKTASYTVERPLQFGAAIAGA 223

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           S +     R FG  LGI FQL DDLL    D
Sbjct: 224 SPDLITAYRSFGAGLGIAFQLRDDLLGVFGD 254


>gi|145245453|ref|XP_001394994.1| hexaprenyl pyrophosphate synthase [Aspergillus niger CBS 513.88]
 gi|134079694|emb|CAK97120.1| unnamed protein product [Aspergillus niger]
          Length = 450

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/278 (20%), Positives = 101/278 (36%), Gaps = 75/278 (26%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASL----------------- 64
            L +    +    +  L    +Y     GK +R  LV   +                   
Sbjct: 90  FLTKNLRQLLGSGHPTLDKVAKYYTRSEGKHMRPLLVLLMSQATALCPRKTGTDNNSATV 149

Query: 65  ------------------------------FNVNHL---TALRVGAAIECIHCYSLIHDD 91
                                         F  +     T  R+    E IH  SL+HDD
Sbjct: 150 NDPISSPSILVDNNPDLDALSSGSADAPYDFAGDKDILPTQRRLAEITELIHTASLLHDD 209

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  +DN   RR   + ++Q+    A++AG+ +L  A   ++  +      + S ++    
Sbjct: 210 V--IDNAVSRRSLTSANLQFGNKMAVLAGDFMLGRASVALARLRDPEVIELMSTVIT--- 264

Query: 152 HNIGLQGMLGGQMLDIQDEFIDE----------TQVFMIQKMKTGALMCFACESGAIMAH 201
                  ++ G+ + +++   DE          +       +KTG+L+  +C S A++ H
Sbjct: 265 ------NLVEGEFMQLKNTAADEKNPVFTDDTLSYYLQKTYLKTGSLISKSCRSTAVLGH 318

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           ++    E    +G NLG+ FQL DD+LD    E +L K
Sbjct: 319 SAPEVVEASYQYGRNLGLAFQLVDDMLDYTLTEAELGK 356


>gi|198419107|ref|XP_002123764.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
           subunit 1 [Ciona intestinalis]
          Length = 400

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLI 88
             L +   Y   G GK  R  +V+  + L N +            ++    E IH  SLI
Sbjct: 108 KPLQTMCSYYFDGNGKHFRPKVVSLVSKLCNEHGGIERKVSENQRKISLIAEMIHVGSLI 167

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D   +RRGK +V+    +  A++ GN ++  A +++SS        I SQ++ 
Sbjct: 168 HDDV--VDFSNVRRGKRSVNALCGDHNAVMVGNYVVANASKLLSSIGNPEITIIISQIID 225

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            +       G    Q    Q +             KT +L+   C++ A ++  +    E
Sbjct: 226 DIVR-----GEFMQQDNKDQFKH-----YLKKTYKKTASLIANCCKAVACLSSNNNEVIE 275

Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
               +G N+G+ FQL DDLLD   
Sbjct: 276 AAYQYGSNIGMAFQLVDDLLDFVA 299


>gi|315504299|ref|YP_004083186.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315410918|gb|ADU09035.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 355

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 23/214 (10%)

Query: 39  LLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAA-IECIHCYSLIHDDLPSMD 96
           + +A+R + L GGK++R          F     + + V AA +E  H ++LIHDD+  +D
Sbjct: 40  VHTAVRWFVLAGGKRMRPLFCYWGWRGFGGPDASPIVVAAASLELFHAFALIHDDI--VD 97

Query: 97  NGYIRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
               RRG PT+H                  Y    A++ G+   T++ ++        + 
Sbjct: 98  RSDRRRGAPTLHRFFAELHAASGWPGDPAAYGRQAAVLCGDLCATWSAQMFHGCGLPPER 157

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIM 199
             R  ++L+   +  + G     +    D  +       + ++KT    +    + GA +
Sbjct: 158 LRRGHVLLARMRSEVIAGEYLDVVGAAGDGSV--ANALTVVRLKTARYTVTRPVQIGAAL 215

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A A+  E   L  FG+ LG  FQL DDLL    D
Sbjct: 216 AGAAPEEVAALAGFGDPLGDAFQLRDDLLGVFGD 249


>gi|325282325|ref|YP_004254866.1| Geranyltranstransferase [Deinococcus proteolyticus MRP]
 gi|324314134|gb|ADY25249.1| Geranyltranstransferase [Deinococcus proteolyticus MRP]
          Length = 343

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 31/235 (13%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--------NV 67
            +  L ++L      ++    D + +       GGK++R  +    A             
Sbjct: 31  FEQRLREVLRSEVEFIELIGEDLVAA-------GGKRLRPLVTLLSAQALQVGAPEDAGG 83

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +H  AL +   IE +H  SL+HDDL  +D+   RRG+     +Y  V ++++G+ +L   
Sbjct: 84  HHGDALALAICIELLHSASLLHDDL--IDDADTRRGQEAAFRRYGNVVSVMSGDFMLARL 141

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMK 184
             ++S      +        L+         +  G++L  Q          Q   I   K
Sbjct: 142 LMLLSELPAAAR--------LTRAFGEVASVICEGEVLQFQVAAYGNPTPEQYSRIIYGK 193

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           T AL+  A  + A++  AS  +++ LR +G  LG+ FQ+ DDLLD    EEDL K
Sbjct: 194 TAALLELAAAAPALLLGASAAQEQALRQYGRELGMAFQIRDDLLDLLGREEDLGK 248


>gi|145225827|ref|YP_001136505.1| trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK]
 gi|145218313|gb|ABP47717.1| Trans-hexaprenyltranstransferase [Mycobacterium gilvum PYR-GCK]
          Length = 335

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 23/225 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +      +++   RI+ ++ + L +  + M    N  L  A      GGK+ R       
Sbjct: 15  DAQFAQDVRDGVARIEALMSEELGRADALMSEAVN-HLFQA------GGKRFRPLFTVLS 67

Query: 62  ASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L        + V  A IE +H  +L HDD+  MD   +RRG P+ + ++    AI+AG
Sbjct: 68  AQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSANARWGNNIAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           + L   A  + S    +      +  +++ T  +    ++ GQM + +   D+       
Sbjct: 126 DYLFATASRLTSRLGPE------AVRIIADTFAL----LVTGQMRETRGAADQVDSVDHY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             +   KT  L+  +   GA  + + + + ERL   G  +G  FQ
Sbjct: 176 LKVVYEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQ 220


>gi|225158893|ref|ZP_03725207.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
 gi|224802511|gb|EEG20769.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
          Length = 429

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 42/253 (16%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L+    R+D  L + L+     ++   +  + ++       GK+IR  LV       + 
Sbjct: 88  RLKPRMARLDAFLREQLVAFEPEIRDMADYCIDTS-------GKRIRPALVFLAGWAGDD 140

Query: 68  --------------------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
                                          +R  A +E +H  +L+HDD+  MD   +R
Sbjct: 141 ECGGGGGGGRIDDDIGALLRSSDSAFPDDPLVRAAAVVELVHLATLVHDDI--MDEADVR 198

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           R +PT   +Y    A++ G+ LL +A  + S   T       SQ    +     +Q +  
Sbjct: 199 RNRPTAARKYGSEAAVLLGDALLAHAVYLASQFPTTEVCAAVSQSTRKVCAGEIVQTLRR 258

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           G         I       +  +KT  L   +C  GA ++    +       FG +LGI +
Sbjct: 259 GTT------DISRADYDRVIDLKTAELFRVSCHLGARLSGH-PDFAPAASTFGRHLGIAY 311

Query: 222 QLADDLLDCEEDL 234
           Q+ DDL D   + 
Sbjct: 312 QIYDDLADFFGEE 324


>gi|323356280|gb|EGA88084.1| Coq1p [Saccharomyces cerevisiae VL3]
          Length = 371

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 43/204 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 75  RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISR 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------------------------- 167
                   + S  + +L     +Q        DI                          
Sbjct: 133 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRV 192

Query: 168 ----------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                      D+ I+    + I K  +KT AL+  +C   AI++ AS    +    FG 
Sbjct: 193 PSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGR 252

Query: 216 NLGIIFQLADDLLDCE---EDLPK 236
           NLGI FQL DD+LD     +DL K
Sbjct: 253 NLGICFQLVDDMLDFTVSGKDLGK 276


>gi|118475154|ref|YP_891862.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414380|gb|ABK82800.1| polyprenyl synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 294

 Score =  141 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +RID IL + +      + ++   ++ S        GKK+RS L+ + A         + 
Sbjct: 2   ERIDDILKEFVDSLNYPLASEMFSQVSS--------GKKLRSKLILKIA----GASEASF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ + +E IH  SL+HDD+  +D+  IRRGKP+++  +    +I+ G+ L +  F  I  
Sbjct: 50  KLSSVVEIIHLASLLHDDV--IDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGFNEI-- 105

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
               +K +++   ++S        G L    L       D+ +   +   KT  L+  A 
Sbjct: 106 ----VKFDMKIADIISDAVCKLSIGELMDVEL-GSSFNADKEKYLKMIYFKTAVLIEAAA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +S AI+A   +   ++   +G+NLG+ FQ+ DD+LD   D  
Sbjct: 161 KSAAILAGFDE---QKYGDYGKNLGLAFQIVDDILDITSDEK 199


>gi|219125696|ref|XP_002183110.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405385|gb|EEC45328.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 309

 Score =  141 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 18/185 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+ R  +V   A           ++G  +E IH  SLIHDD+  +D    RRG   VH 
Sbjct: 39  GKRFRPTIVQLMAK--------TAQLGQIVEMIHVASLIHDDV--LDEADTRRGGEAVHK 88

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ LL  A  +++       +N     +++      + G +  Q+    +
Sbjct: 89  LYSNKVAVLAGDYLLARASVLLARL-----ENTAVVQVMATALESLVAGEIM-QLKSPAE 142

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLGIIFQLADDL 227
             ++          KT +L+C+AC S A++   +           FG +LG+ +Q+ DD+
Sbjct: 143 SLLEMESYLRKSYYKTASLICYACRSTALLGGHAYGSTVATACEEFGFHLGLAYQIQDDI 202

Query: 228 LDCEE 232
           LD   
Sbjct: 203 LDFTA 207


>gi|257066522|ref|YP_003152778.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798402|gb|ACV29057.1| Polyprenyl synthetase [Anaerococcus prevotii DSM 20548]
          Length = 278

 Score =  141 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 11/237 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN  +  K +        I+D+ + +  S      + ++  A+ YA   GK+IR+ L  E
Sbjct: 1   MNNTIYEKYENRLAYNKRIIDEEMKKYFSE-----DSKINEAMLYAADSGKRIRASLFLE 55

Query: 61  CASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              L  N      L    AIE I  YSL+HDDLP+MD+   RRGK +VH  Y E  AI+ 
Sbjct: 56  NRRLHTNEISKNDLLFALAIEMIQAYSLVHDDLPAMDDDDYRRGKESVHKHYGEDLAILT 115

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVF 178
           G+ LL+ A  ++     +    +++   L     +G  GM+ GQ+LD  + +   E  + 
Sbjct: 116 GDALLSEASMLMMDVSLEDPSYLKAASYL--MKKVGKDGMITGQILDLRRRKSYAEDFLV 173

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +   KTG     A  +  I+    +    +L  +   LG+ FQ+ DDLL  EED  
Sbjct: 174 EVYDKKTGDFFKGAIVAAGIVNGYDEEIIAKLERYSYYLGLGFQIQDDLL--EEDFK 228


>gi|257056769|ref|YP_003134601.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
 gi|256586641|gb|ACU97774.1| geranylgeranyl pyrophosphate synthase [Saccharomonospora viridis
           DSM 43017]
          Length = 361

 Score =  141 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 97/247 (39%), Gaps = 34/247 (13%)

Query: 15  RIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
             + +L D L    ++   ++      + +   + L GGK++R                +
Sbjct: 11  EFERVLRDFLHDAGESICRIEPTFGPAVSTLRDFVLGGGKRLRPTFAWWAWRGAGGTPDS 70

Query: 72  -----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY--------------- 111
                 LR  A++E I   +LIHDD+  +D+   RRG PTVH+ +               
Sbjct: 71  DEAEGVLRAVASLELIQACALIHDDV--IDSSDSRRGSPTVHVAFAARHTRERWLGSAEA 128

Query: 112 -DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
             +  A++ G+  L +A ++ +           ++             +L GQ LD+  +
Sbjct: 129 FGQAAAVLIGDLALAWAEDMFAECGLPPATIAAAR----PAWRAMRTEVLAGQYLDVHTQ 184

Query: 171 FIDETQVF---MIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              +T V     + ++KT A         GA +A A     + L  FG  LG+ FQL DD
Sbjct: 185 ATGDTSVEAALRVDRLKTAAYTVQRPLHLGAALAGADDELIDALLDFGGELGVAFQLRDD 244

Query: 227 LLDCEED 233
           LL    D
Sbjct: 245 LLGVFGD 251


>gi|120402007|ref|YP_951836.1| trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1]
 gi|119954825|gb|ABM11830.1| Trans-hexaprenyltranstransferase [Mycobacterium vanbaalenii PYR-1]
          Length = 329

 Score =  141 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 25/226 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
           +      +++   RI+ ++ + L +    M          A+++    GGK+ R      
Sbjct: 9   DAEFAQDVRDGVARIEALMSEELGKADVLM--------AEAVQHLFQAGGKRFRPLFTVL 60

Query: 61  CASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            A L        + V  A IE +H  +L HDD+  MD   +RRG P+ + ++    AI+A
Sbjct: 61  SAQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSANARWSNNIAILA 118

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQ 176
           G+ L   A  ++S           +  +++ T  +    ++ GQM + +   D   +   
Sbjct: 119 GDYLFATASRLVSRLGPD------AVRIIADTFAL----LVTGQMRETRGAADHVDEVDH 168

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
              +   KT  L+  +   GA  + A   + ERL   G  +G  FQ
Sbjct: 169 YLKVVYEKTACLIAASGRFGATFSGADDEQIERLARLGGIVGTAFQ 214


>gi|307325382|ref|ZP_07604584.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306888851|gb|EFN19835.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 365

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 5/185 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A          +    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 72  GGKAVRPALALLSAEAAGAAPGAGVPGAVAVELVHNFSLLHDDL--MDGDEQRRHRDTVW 129

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ L   A EI+    T   D  R+   L+      + G       + +
Sbjct: 130 KVHGPAQAILVGDALFALANEILLELGT--ADAGRATRRLTAATRKLIDGQAQDISYEHR 187

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            E +   +   ++  KTGAL+  A   GA++  A     + L  +G +LG+ FQ  DDLL
Sbjct: 188 -ERVTVEECLEMEGNKTGALLACAASIGAVLGGADDRTADTLERYGYHLGLAFQAVDDLL 246

Query: 229 DCEED 233
               D
Sbjct: 247 GIWGD 251


>gi|218884766|ref|YP_002429148.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218766382|gb|ACL11781.1| Polyprenyl synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 353

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 68/248 (27%), Positives = 101/248 (40%), Gaps = 34/248 (13%)

Query: 14  KRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---SLFNV 67
           K ++  L  +   L + AS +     D +  A  Y L GGK++R+FL           + 
Sbjct: 2   KLVEDNLKTVFSKLREEASSVSPLTYDIIEIASDYTLRGGKRLRAFLALVGYWSREWGSG 61

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI---------------QYD 112
           +  T   V + IE +  Y LIHDD+  MD   +RRG PTVH                 Y 
Sbjct: 62  DLATITNVMSGIELLQSYLLIHDDV--MDRDELRRGGPTVHAWFRDKCLKEMKGDCVHYG 119

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF- 171
           +  AI  G+ L   A E IS      +   R    L  T++ GL+ +  GQ LD+     
Sbjct: 120 DSQAITVGDYLEATAVEYISRANLPGETLRR----LLETYSRGLRMVAYGQYLDVLLSNK 175

Query: 172 ----IDETQVFMIQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLAD 225
               + E  V ++  +KT    +      G I +   S+     L  +    GI FQL D
Sbjct: 176 PLGNVSERDVLLVHTLKTASYTIELPLHLGVIASGKYSEKILRELTSYAIPAGIAFQLRD 235

Query: 226 DLLDCEED 233
           D++    D
Sbjct: 236 DIIGLYGD 243


>gi|147920444|ref|YP_001218859.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I]
 gi|116077941|emb|CAL59658.1| polyprenyl synthetase [uncultured methanogenic archaeon RC-I]
          Length = 289

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 22/225 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN 68
            +  + I+  +D LL              +   + ++L   GK++R   +   A L    
Sbjct: 7   WKEMRAINEGIDQLLAGVEL-------PEIRQGMAHSLKTSGKRLRPLTLLIMAELNGGT 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              AL     IECIH  SLI DD+  +D G  RRG+ T H ++    A ++ + L++ A 
Sbjct: 60  VEKALNAALGIECIHTASLIQDDI--LDEGLKRRGELTSHEKFGIFIATVSADYLISRAV 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG 186
            + S    +  +                  +  G++LDI  +    DE       + KT 
Sbjct: 118 MLYSGYDAKSIE----------AFGRMGLELAEGEVLDIKTRRSKTDEAYYLECVRRKTA 167

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                  E GA +A  S ++ E  R  GE  GI +Q+ DDL++  
Sbjct: 168 TAFASCFEIGARIAGVSDDKAELCRKMGEEFGIAYQIVDDLIEFT 212


>gi|34557907|ref|NP_907722.1| polyprenyl synthetase ) [Wolinella succinogenes DSM 1740]
 gi|34483625|emb|CAE10622.1| POLYPRENYL SYNTHETASE ) [Wolinella succinogenes]
          Length = 300

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 30/225 (13%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
             +RI+  + + LL+  S    Q        +  +L  GK +RS L+   A         
Sbjct: 3   VLERIEARVKEWLLEVGSKEALQ--------MSQSLSSGKMLRSKLILAIA----GESEE 50

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           +L + AA+E I   SL+HDD+  +D+ + RRGKP+++  +    AI+ G+   + AF  +
Sbjct: 51  SLSLCAAVELIQSASLLHDDV--IDDAFTRRGKPSINAAFGNKNAIMLGDIFYSKAFFEL 108

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGAL 188
           +          R   +++ T +  +  +  G++ D+   Q   ++E     + + KT +L
Sbjct: 109 T----------RFSPLIARTVSHAVVRLSLGELADVTLAQTFNLEEHLYMQMIEDKTASL 158

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  A ++ A++        E  R +G+NLG+ FQ+ DDLLD  +D
Sbjct: 159 IEAAAQAAALLVSRDS---EAFRIYGKNLGLAFQIIDDLLDITQD 200


>gi|240273961|gb|EER37480.1| decaprenyl-diphosphate synthase subunit 1 [Ajellomyces capsulatus
           H143]
          Length = 414

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   ++ 
Sbjct: 121 RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALAR 178

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
            +      + S ++ +L    G    L     D  +    E   T       +K+ +L+ 
Sbjct: 179 LRDPEVIELLSTVIANLIE--GEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 236

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
            +C + A++ H+S    E    +G NLG+ FQL DD+LD     D L K
Sbjct: 237 KSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTISGDELGK 285


>gi|254513762|ref|ZP_05125823.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
           NOR5-3]
 gi|219676005|gb|EED32370.1| geranylgeranyl pyrophosphate synthetase [gamma proteobacterium
           NOR5-3]
          Length = 290

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 14/220 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
            + +L   + + A    ++    L +A+++A+  GG ++R  L    A   N +      
Sbjct: 8   FEQVLRSAVAEAA---DSRCPKLLAAALQHAVFPGGARVRPKLCLAVALANNCDAPALAA 64

Query: 75  VGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
             A ++E +HC SL+HDD+P  DN   RRG+ +VH  + E  A++AG+ L+  AF +++ 
Sbjct: 65  AAAASVELLHCASLVHDDMPCFDNAGERRGRESVHSAFGEPIALLAGDALIVSAFALLAR 124

Query: 134 PKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           P+   K+ + SQ++  +   +G   G+  GQ      E      V +  + KTGAL   A
Sbjct: 125 PQLPAKNRL-SQVLRVVAEGVGAPCGIAAGQAW----ESEPVVDVSLYHRSKTGALFIAA 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +GA  A          R  G  +G  +Q+ADD+ D   
Sbjct: 180 TAAGAAAAGVD---VGPWRTLGAKIGEAYQVADDIQDATS 216


>gi|29829539|ref|NP_824173.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|29606647|dbj|BAC70708.1| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
          Length = 337

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A        T L    A+E +H +SL+HDDL  MD    RR + TV 
Sbjct: 52  GGKAVRPALALLSAQAAGAPAETGLPGAVAVELVHNFSLLHDDL--MDGDEERRHRRTVW 109

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+ LL  A E++                 +       + ++ GQ+ D+ 
Sbjct: 110 TLWGASGAILTGDALLALAQEVLLDCGLPTGAA------AARLLARTTRDLIRGQVQDVA 163

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +   +   +   KTGAL+  +   GA++A A     + L  +G+ +G+ FQL D
Sbjct: 164 FERRAHVPIEECVDMAAGKTGALLSASAAIGAVLAGAPVTTVDALALYGQQVGLAFQLTD 223

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 224 DVLGIWGD 231


>gi|29840764|ref|NP_829870.1| geranyltranstransferase [Chlamydophila caviae GPIC]
 gi|29835114|gb|AAP05748.1| geranyltranstransferase [Chlamydophila caviae GPIC]
          Length = 293

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 16/228 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
           I+  ++  L +  S   +     + + + YAL  GGK+IR  LV   A   +++    L 
Sbjct: 14  IEAGIESSLEEFGSKGLS-----VRAPVEYALTSGGKRIRPMLVCMIAKGLDMSRD-VLD 67

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
              AIE IH  +LI DDLP MD+   RRG+PTVH  +DE +A++A   L+  A+  I   
Sbjct: 68  AALAIEFIHTSTLIADDLPCMDDDDERRGRPTVHKAFDEASALLASYALIPAAYSRIRLN 127

Query: 135 KTQLKD--------NIRSQLMLSLT-HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             +LK         +I   ++  +T  N G+ G+LGGQ  D+  +      V  I   KT
Sbjct: 128 AKKLKSQGVDPKEVDIAYDIISDVTDKNFGVNGVLGGQYEDMFFKNDGPEYVQSIINKKT 187

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           GAL   AC SG +          ++  F +  G++FQ+ DD+LD  +D
Sbjct: 188 GALFEIACVSGWLFGGGDPLCVPQIIEFSQTFGLLFQMKDDILDIHQD 235


>gi|15828220|ref|NP_302483.1| polyprenyl diphosphate synthase component [Mycobacterium leprae TN]
 gi|221230697|ref|YP_002504113.1| polyprenyl diphosphate synthase component [Mycobacterium leprae
           Br4923]
 gi|13093913|emb|CAC31793.1| polyprenyl diphosphate synthase component [Mycobacterium leprae]
 gi|219933804|emb|CAR72375.1| polyprenyl diphosphate synthase component [Mycobacterium leprae
           Br4923]
          Length = 330

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 23/225 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + +Q+   RI+ ++D  L  T   M T+    L +A      GGK+ R       
Sbjct: 10  DAAFAATVQDRVVRIEQLMDAELRDTDEVM-TESVLHLFAA------GGKRFRPLFTVLS 62

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +    +    +  GA IE +H  SL HDD+  MD   +RRG P+ ++++    AI+AG
Sbjct: 63  AQIGPRPDAPEVIIAGAVIELVHLASLYHDDV--MDEAEVRRGAPSANLRWSNSVAILAG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQV 177
           + L   A  ++S           +  +++ T       ++ GQM + +          Q 
Sbjct: 121 DYLFATASRLVSQLGLD------AVRIIADTFA----QLVTGQMRETRGVPEGADSIEQY 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             +   KTG L+  A   G + A A   + ERL   G  +G  FQ
Sbjct: 171 LKVVYEKTGCLIGSAGRLGGLFAGAHAEQVERLSRLGSIVGTAFQ 215


>gi|315442465|ref|YP_004075344.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
 gi|315260768|gb|ADT97509.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
          Length = 329

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 23/225 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +      +++   RI+ ++ + L +  + M    N  L  A      GGK+ R       
Sbjct: 9   DAQFAQDVRDGVARIEALMSEELGRADALMSEAVN-HLFQA------GGKRFRPLFTVLS 61

Query: 62  ASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L        + V  A IE +H  +L HDD+  MD   +RRG P+ + ++    AI+AG
Sbjct: 62  AQLGPEPDAWQVTVAGAVIELVHLATLYHDDV--MDEAQVRRGAPSANARWGNNIAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           + L   A  + S    +      +  +++ T  +    ++ GQM + +   D+       
Sbjct: 120 DYLFATASRLTSRLGPE------AVRIIADTFAL----LVTGQMRETRGAADQVDSVDHY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             +   KT  L+  +   GA  + + + + ERL   G  +G  FQ
Sbjct: 170 LKVVYEKTACLISASGRFGATFSGSDEAQIERLAKLGGIVGTAFQ 214


>gi|134098296|ref|YP_001103957.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133910919|emb|CAM01032.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 358

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 100/257 (38%), Gaps = 33/257 (12%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQ---TASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           M   LP ++QE        L D L      +  +       +   +R+ L GGK+IR   
Sbjct: 1   MEADLPGRVQET-------LADYLRTRRTQSRELDAAFATAVDELVRFVLGGGKRIRPTF 53

Query: 58  VT----ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH---- 108
                       +     A+ R  +++E +   +L+HDDL  +D+   RRG PTVH    
Sbjct: 54  AWWGWRAAGGAADGPQAQAMLRAASSLELLQACALVHDDL--IDDSDTRRGNPTVHQAFA 111

Query: 109 ------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
                        Q+    AI+ G+  L +A +++ +     +   R            L
Sbjct: 112 ALHRHQRWNGEDRQFGMAAAILLGDLALAWADDMLHASGLPPEAMARGLRPWRAMRTEVL 171

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            G     +  ++ +   +  + + +       +    E GA +A A +   E LR FG +
Sbjct: 172 AGQYLDLLGPVRGDETPQAALRIDELKSASYTVQRPLELGAELAGADETALEALRRFGSD 231

Query: 217 LGIIFQLADDLLDCEED 233
           +G+ FQL DDLL    D
Sbjct: 232 IGVAFQLRDDLLGVFGD 248


>gi|19112068|ref|NP_595276.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces
           pombe 972h-]
 gi|20137618|sp|O43091|DPS1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 1; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           1; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 1
 gi|1845555|dbj|BAA12314.1| decaprenyl diphosphate synthase subunit 1 [Schizosaccharomyces
           pombe]
 gi|6714819|emb|CAB66154.1| decaprenyl diphosphate synthase subunit Dps1 [Schizosaccharomyces
           pombe]
          Length = 378

 Score =  141 bits (355), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 28/214 (13%)

Query: 45  YALLGGKKIRSFLVTECASL----FNVNHLTA----------------------LRVGAA 78
           Y +  GK++R  LV   +        ++                          LR+   
Sbjct: 66  YTIAQGKQMRPSLVLLMSKATSLCHGIDRSVVGDKYIDDDDLRSFSTGQILPSQLRLAQI 125

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E IH  SL+HDD+  +D+  +RRG P+ ++ +    +I+AGN +L  A   ++  +   
Sbjct: 126 TEMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILARASTAMARLRNPQ 183

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
              + + ++  L     LQ         ++ +  +         +KT +L+  +C++  I
Sbjct: 184 VTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLISKSCKASTI 243

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   S         +G  +G  FQL DD+LD   
Sbjct: 244 LGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTS 277


>gi|227486380|ref|ZP_03916696.1| possible trans-hexaprenyltranstransferase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227235561|gb|EEI85576.1| possible trans-hexaprenyltranstransferase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 330

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 12/235 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLG-GKKIRSFLV 58
           MN  +   L    K ID  +  +  +  + +   + +  L   I+ AL   GK +R+ L+
Sbjct: 1   MNVIVSEAL-TREKLIDDCVSKVHEEIKNILSDYKSSQNLCDIIKDALTSSGKMLRTKLL 59

Query: 59  TECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
              + + +       +   AA+E  H  SLIHDD+  +D+  +RR   +   +Y +  A+
Sbjct: 60  ISISLMGDGEISKKVISQAAAVEITHLASLIHDDI--IDDSTLRRSHKSTQAKYGKDVAV 117

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            AG+ ++   F  +++     +  + +  +  + +         GQ L      + E + 
Sbjct: 118 FAGDYMIAKVFSYLANENLYDEIKVIANTIKHMCNGEV------GQNLIKYRLDMGEDEY 171

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           F     KT +     C  GA  A   Q + ER+  FGENLG++FQL DDLLD   
Sbjct: 172 FENISGKTASFFKTVCYFGARNAGFGQMDTERMVAFGENLGLMFQLKDDLLDLFS 226


>gi|115523345|ref|YP_780256.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
 gi|115517292|gb|ABJ05276.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
          Length = 288

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 15/212 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-HLTA 72
           RI+  L D +   A         RL  A+RY++   G ++R  L    A+    +     
Sbjct: 6   RIEQALTDAIGMAAV---AGCPPRLAEAMRYSVFPRGARVRPRLCHSVAAACGEDNPAAT 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
              GAA+E +HC SL+HDDLP  D    RRG+P+VH  + E  A++ G+ L+  AF+ I+
Sbjct: 63  EAAGAALELMHCASLVHDDLPCFDGADTRRGRPSVHKTFGEPLAVLTGDALIVLAFQTIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
             +         +L +++   +G+  G++ GQ  + +     E  +    + KTGAL   
Sbjct: 123 --RVDCDPARLLKLTMTVGEAVGVPFGIVAGQAWECE----SEINLAHYHRSKTGALFVA 176

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           A  +    A ++  +    R  GE +G  +Q+
Sbjct: 177 ATAA---GAASAGADPAPWRLVGEKIGEAYQV 205


>gi|149923736|ref|ZP_01912130.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica
           SIR-1]
 gi|149815420|gb|EDM74960.1| geranylgeranyl pyrophosphate synthetase [Plesiocystis pacifica
           SIR-1]
          Length = 262

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 8/177 (4%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           +   C +   V+      V AA+E +HC SL+HDDLP  D+  +RRG+P+VH  + E  A
Sbjct: 1   MAMACKADARVSLDAQADVAAAMELMHCASLVHDDLPCFDDAPLRRGRPSVHAAFGEELA 60

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++AG+GL+  A+E+I+   T L  +   +L+  ++  +G  G L        +  +    
Sbjct: 61  VLAGDGLIILAYEVIAE--TNLPPSAVPKLIRCISRGVGAGGGLVAGQAWESERSVGLQT 118

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                + KTGAL      +GAI+A A Q   E    FG +LG  +Q+ADDL D   D
Sbjct: 119 Y---HQAKTGALFEAGARAGAILAGAPQ---EPWAKFGAHLGEAYQVADDLRDALGD 169


>gi|302536833|ref|ZP_07289175.1| polyprenyl synthetase [Streptomyces sp. C]
 gi|302445728|gb|EFL17544.1| polyprenyl synthetase [Streptomyces sp. C]
          Length = 290

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAI---ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
             LV   A               A    E  H ++L+HDD+  +D    RRG+PT    +
Sbjct: 10  PALVLVSARALGAPAEAVRGAVRAAAAVELAHNFTLLHDDI--IDRDVRRRGRPTAWTVF 67

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE- 170
               AI+AG+ ++  A  +++                S      +  +  GQ  D   E 
Sbjct: 68  GTPHAILAGDAMMALALRLLAEDPHPASAR------ASARLAACVVELCEGQQADCAFEE 121

Query: 171 --FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              +   +   +   KTGAL+  AC  GA+ A A   E E +  FG   G+ FQL DDL+
Sbjct: 122 RAHVSLDECLTMAAAKTGALLGCACALGALYAGAGPEEVEAVDAFGREAGLAFQLIDDLI 181

Query: 229 DCEEDLP 235
               D  
Sbjct: 182 GIWGDPG 188


>gi|256375538|ref|YP_003099198.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255919841|gb|ACU35352.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 356

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 101/251 (40%), Gaps = 34/251 (13%)

Query: 11  ENSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           + +K +D+ L   L    +    M+    + +     + L GGK++R             
Sbjct: 9   DLAKHVDSALAAYLADRRALGERMERSFTEAVDGLTDFVLSGGKRVRPTFAWWGWRAAGG 68

Query: 68  NHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------- 111
           +         L   +++E I   +LIHDDL  MD    RRG+PT+H+Q+           
Sbjct: 69  DPDQESAGRVLTAVSSLELIQACALIHDDL--MDASETRRGRPTIHVQFARRHRENSWLS 126

Query: 112 -----DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                    A++ G+  L +A +++ +         R    LSL        ML GQ LD
Sbjct: 127 SPEQFGLAAAVLIGDVALAWADDMLFAAGLPTDALQR----LSLPWRDMRTEMLAGQYLD 182

Query: 167 IQDEFIDETQV---FMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +  +   +        I ++KT A  +      GA +   S    E LR FG ++G+ FQ
Sbjct: 183 VLTQARGDASADAALRIDRLKTAAYTVERPLHMGAAIGGGSAELIEGLRAFGRDIGVAFQ 242

Query: 223 LADDLLDCEED 233
           L DDLL    D
Sbjct: 243 LRDDLLGVFGD 253


>gi|120404508|ref|YP_954337.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119957326|gb|ABM14331.1| geranylgeranyl-diphosphate synthase [Mycobacterium vanbaalenii
           PYR-1]
          Length = 359

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 32/258 (12%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           M+   PS + E +  +   L D L    + A+++   +     +   + L GGK++R   
Sbjct: 1   MDASAPSAV-ELAAAVTEQLRDYLRARRRDAAYIGAGYAVLTEAVEEFVLRGGKRLRPAF 59

Query: 58  VTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------ 109
                           ALR+ +A+E +H  +L+HDD+  +D    RRG PTVH       
Sbjct: 60  AYWGWRAVAGTEPGPEALRLFSALELLHACALVHDDV--IDASATRRGLPTVHRIFAERH 117

Query: 110 ----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
                     Q+    AI+ G+  L +A +I++S +  ++ + R Q + +         +
Sbjct: 118 RSNNWLGSSEQFGLSAAILLGDVALVWADDIVASAEIGVEAHRRVQRVWAAIRT----EV 173

Query: 160 LGGQMLDIQDEFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGE 215
           LGGQ LDI +E      V     +   KT    +    + GA  A             G 
Sbjct: 174 LGGQYLDIVNEATGAETVASALTVNIYKTASYTISRPLQLGAAAAADCPEVLSAFHELGT 233

Query: 216 NLGIIFQLADDLLDCEED 233
           +LG+ FQL DD+L    D
Sbjct: 234 SLGVAFQLRDDVLGVFGD 251


>gi|256392496|ref|YP_003114060.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256358722|gb|ACU72219.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 347

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 21/236 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFN-VNHLT 71
           RIDT L   + +    ++        + + +R A+  GK+IR+             +   
Sbjct: 10  RIDTELRAFVREETGLLEAVDPLLAPVGAQLRAAVADGKRIRAAFCYWGWRAAGQGDTPA 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA-------------II 118
            +R  AA+E +H  +L+HDDL  +D+  +RRG PT H+   E TA             ++
Sbjct: 70  MVRAAAAMELVHAAALVHDDL--IDDSLLRRGVPTPHVALREATAKAPDPDGAARSLALL 127

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G+ L+ +A ++ +          R++ M S+     + G      +       D  +  
Sbjct: 128 VGDLLMAWAGQLFTGSGLPAVYLARARPMWSVLARELIAGECL--EVLRTGTETDPQESL 185

Query: 179 MIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I + KT    +    + G  +  AS         +G  LG  FQL DDLL    D
Sbjct: 186 TIIRYKTAKYTVEHPLQIGGRLGGASARTLGVFSDYGLPLGEAFQLRDDLLAVFGD 241


>gi|83594313|ref|YP_428065.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
 gi|25989734|gb|AAN75038.1| CrtE [Rhodospirillum rubrum]
 gi|83577227|gb|ABC23778.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
          Length = 289

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 12/225 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN- 68
           +  + ID +L+  + +            L  A+R+A+  GG ++R  L    A+    + 
Sbjct: 2   DVRQHIDNVLEATMTRADL---PDAPPLLAKAMRHAVFPGGGRLRPRLTLAVAAACGNDL 58

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A    AAIE +HC SL+HDDLP  D+ + RRG+ +VH+ Y E  A++AG+ L+  AF
Sbjct: 59  PAAADAAAAAIELLHCASLVHDDLPCFDDAHSRRGQASVHVAYGEPLAVLAGDALIVMAF 118

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           + ++S    + + +   L +         G+  GQ  + +       ++   Q+ KTGAL
Sbjct: 119 QGLASGLAMVPERLPLLLGIVADAVGMPAGICAGQAWESEPT----VKLAEYQRAKTGAL 174

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +  +    A A+  E    R  GE LG  +Q+ADDL D   D
Sbjct: 175 FAASTMA---GAAAAGREARSWRMLGECLGEAYQVADDLRDVAAD 216


>gi|288220|emb|CAA79955.1| geranylgeranyl pyrophosphate synthetase [Myxococcus xanthus]
          Length = 361

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 13/237 (5%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE---CA 62
           + LQ     ++T L +L  L   + +  +    L  A  Y L   K++R  LV      A
Sbjct: 20  AWLQLVQTEVETSLAELFELPDEAGLDVRWTQALTQARAYTLRPAKRLRPALVMAGHCLA 79

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTAI 117
               V      R  A +E +H + LIHDD+   D   +RRG P +H      +  E  A+
Sbjct: 80  RGSAVVPSGLWRFAAGLELLHTFLLIHDDVA--DQAELRRGAPPLHRMLAPGRAGEDLAV 137

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L   A E++          +    +    H    Q +          E +   Q 
Sbjct: 138 VVGDHLFARALEVMLGSGLTCVAGVVQYYLGVSGHTAAGQYLDLDLGRAPLAE-VTLFQT 196

Query: 178 FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  +KT     C      A++  AS    E L   G ++G+ +QL DDLL    D
Sbjct: 197 LRVAHLKTARYGFCAPLVCAAMLGGASSGLVEELERVGRHVGLAYQLRDDLLGLFGD 253


>gi|326404029|ref|YP_004284111.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium
           multivorum AIU301]
 gi|325050891|dbj|BAJ81229.1| putative geranylgeranyl pyrophosphate synthase [Acidiphilium
           multivorum AIU301]
          Length = 289

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 11/203 (5%)

Query: 36  NDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLP 93
             +L +A+R+A+   G ++R  L    AS    +    A+  GAA+E +HC SL+HDDLP
Sbjct: 24  PPKLAAAMRHAVFPRGARVRPRLCLAVASACGADRFDAAVAAGAALEFLHCASLVHDDLP 83

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+   RRG+P+VH  +    A++AG+ L+  AF+ ++     ++      L   +   
Sbjct: 84  CFDDAATRRGRPSVHAAFGAPIAVLAGDALIVLAFQTLA-LGCAVQPGPVIALSGIVAEA 142

Query: 154 IGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           +G+  G++ GQ      E  DE  +   Q+ KT AL   A  +GA  A     +    R 
Sbjct: 143 VGMPGGIVAGQAW----ESEDEVDLARYQRAKTSALFAAAAMAGAASAG---EDPLPWRA 195

Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
            G+NLG  +Q+ADDL D   D  
Sbjct: 196 LGDNLGDAYQIADDLCDAAGDAA 218


>gi|108759001|ref|YP_629155.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622]
 gi|108462881|gb|ABF88066.1| putative farnesyltranstransferase [Myxococcus xanthus DK 1622]
          Length = 361

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 13/237 (5%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE---CA 62
           + LQ     ++T L +L  L   + +  +    L  A  Y L   K++R  LV      A
Sbjct: 20  AWLQLVQTEVETSLAELFELPDEAGLDVRWTQALTQARAYTLRPAKRLRPALVMAGHCLA 79

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTAI 117
               V      R  A +E +H + LIHDD+   D   +RRG   +H      +  E  A+
Sbjct: 80  RGSAVVPSGLWRFAAGLELLHTFLLIHDDVA--DQAELRRGAAPLHRMLAPGRAGEDLAV 137

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L   A E++          +    +    H    Q +          E +   Q 
Sbjct: 138 VVGDHLFARALEVMLGSGLTCVAGVVQYYLGVCRHTAAGQYLDLDLGRAPLAE-VTLFQT 196

Query: 178 FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  +KT     C     GA++  AS    E L   G ++G+ +QL DDLL    D
Sbjct: 197 LRVAHLKTARYGFCAPLVCGAMLGGASSGLVEELERVGRHVGLAYQLRDDLLGLFGD 253


>gi|88706667|ref|ZP_01104370.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis
           KT71]
 gi|88699163|gb|EAQ96279.1| geranylgeranyl pyrophosphate synthetase [Congregibacter litoralis
           KT71]
          Length = 290

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 14/220 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALR 74
            + +L   + + A     +    L +A+ +++  GG ++R  L    A   + +      
Sbjct: 8   FEQVLRSAVEEAA---DARCPKLLAAALHHSVFPGGARVRPKLCLAVALANHCDAPALAA 64

Query: 75  VGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
             A ++E +HC SL+HDD+P  DN   RRG+ +VH  Y E  A++AG+ L+  AF +++ 
Sbjct: 65  AAAASVELLHCASLVHDDMPCFDNADERRGRQSVHTAYGEPIALLAGDALIVSAFALLAR 124

Query: 134 PKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           P+   K+ + SQLM  +   +G   G+  GQ      E      V +  + KTGAL   A
Sbjct: 125 PQLPAKNRL-SQLMRVVAEGVGAPCGIAAGQAW----ESEPVVDVSLYHRAKTGALFIAA 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +GA  A       + L   G  +G  +Q+ADD+ D   
Sbjct: 180 TAAGAAAAGVDVAPWKLL---GAKIGEAYQVADDIQDATS 216


>gi|227503267|ref|ZP_03933316.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens
           ATCC 49725]
 gi|227075770|gb|EEI13733.1| geranylgeranyl pyrophosphate synthase [Corynebacterium accolens
           ATCC 49725]
          Length = 359

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 100/253 (39%), Gaps = 34/253 (13%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTECAS 63
           +L +    +   L   L Q   H+       + +A+ +     L GGK++R         
Sbjct: 6   ELADIPGAVREKLAIFLDQRRDHVAEIGAP-VSTAMSFLESFVLDGGKRVRPMYAWAGYL 64

Query: 64  LFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------- 110
                  +    LR  +++E I   +LIHDD+  +D    RRGKPTVH +          
Sbjct: 65  AAGRGSESPEAMLRAASSLEFIQACALIHDDI--IDASNTRRGKPTVHREAERLHRESDF 122

Query: 111 ------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                 +    AI+ G+  L YA ++        +   R++             +LGGQ+
Sbjct: 123 LGDPEFFGTSVAILVGDFALVYAEDMFQDSGLSPEALQRARDPWRGMRT----EVLGGQL 178

Query: 165 LDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           LDI  E      V +   + + KT A  +      GA +A AS       R +G ++GI 
Sbjct: 179 LDISLEAAGSESVALSNSVNRYKTAAYTIERPLHLGAAIAGASDQLISAFRGYGHDIGIA 238

Query: 221 FQLADDLLDCEED 233
           +QL DD L    D
Sbjct: 239 YQLRDDQLGVFGD 251


>gi|34499409|ref|NP_903624.1| bifunctional short chain isoprenyl diphosphate [Chromobacterium
           violaceum ATCC 12472]
 gi|34105261|gb|AAQ61616.1| Bifunctional short chain isoprenyl diphosphate [Chromobacterium
           violaceum ATCC 12472]
          Length = 338

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 19/224 (8%)

Query: 25  LQTASHMQTQHNDRLLSAI-------------RYALLGGKKIRSFLVTECASLFNVNHLT 71
           L +  +++T    RL  A+              Y    GK +R FLV      F  +   
Sbjct: 8   LASRPYLETALGARLSEAMLQAVKDAWLDPYRSYHNRMGKMLRPFLVCSVMQAFERDPRR 67

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
              V A  E IH  SL+ DD+   D+  +RRG PT H Q     A  AG+  L   F+++
Sbjct: 68  TPVVVAIAEIIHAASLVLDDVA--DDSPLRRGGPTAHRQVGVRVAGAAGSAWLNACFQLL 125

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTGA 187
           ++  + L+     +L   +     + G+              +      +  +    T  
Sbjct: 126 AADDSGLEPEQAQRLADEIAWEHWVTGVGTTIDTTWPWMGRLDGTPAQYLQSVVHRSTSY 185

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                 + GAI A AS  +  +    GE LGI FQ+ DD+L+ +
Sbjct: 186 TYRLPLKLGAIAAGASPQQTAQFAALGEELGIAFQIIDDILNVQ 229


>gi|320333936|ref|YP_004170647.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211]
 gi|319755225|gb|ADV66982.1| Geranyltranstransferase [Deinococcus maricopensis DSM 21211]
          Length = 329

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 85/225 (37%), Gaps = 15/225 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNH-----LT 71
            +LD +     +H        L   +R Y   GGK IR+ L+   A    V         
Sbjct: 4   DLLDRVHTLLPAHHARPEIQLLYDMMRDYPARGGKGIRAELLLASARAHGVREGTPAWEQ 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + A +E    + LIHDD+   D+   RRG+P +H  +    A+ AG+ L  Y +  +
Sbjct: 64  ALWLAATVELFQNWVLIHDDIE--DDSEERRGQPALHRTHGVPLALNAGDALHAYMWAAV 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMC 190
           +            Q++        +        ++     +       + ++KT    + 
Sbjct: 122 ARANVPGAFEEVLQMIHRTAEGQHVDLA----WVEHGRWDLTPADYLDMVRLKTAYYTVV 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                GA+ A A+ +        G  LG  FQ+ DD+L+   D  
Sbjct: 178 VPLRLGALAAGATPS--AAFEAAGVALGAAFQIRDDVLNLTADAG 220


>gi|212276250|ref|NP_001130771.1| hypothetical protein LOC100191875 [Zea mays]
 gi|194690074|gb|ACF79121.1| unknown [Zea mays]
 gi|238009334|gb|ACR35702.1| unknown [Zea mays]
          Length = 245

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SLIHDD+  +D+  +RRGK T+H  Y    A++AG+ +   +   +++ +     
Sbjct: 1   MIHTASLIHDDV--IDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVI 58

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + SQ++               Q   + D  I      +    KT +L+  + +S +I +
Sbjct: 59  KLISQVIKDFASGEI------KQASTLFDCDITLDDYLLKSYYKTASLIAASTKSASIFS 112

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             S    E++  +G NLG+ FQ+ DD+LD  +
Sbjct: 113 GVSTTICEKMYAYGRNLGLSFQVVDDILDFTQ 144


>gi|291518883|emb|CBK74104.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
           16/4]
          Length = 306

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 7/183 (3%)

Query: 50  GKKIRS-FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R+  L+    +   +    A+   +A+E +H  +L+HDD+  MD+   RRG  T+ 
Sbjct: 42  GKMMRASALLAASMNEEGMVPYDAVIFASAVEILHLATLVHDDI--MDDADTRRGLITLQ 99

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +  + TA+I G+ LL  A   I+     + D    +   S        G L  Q ++ +
Sbjct: 100 KKAGKRTAVICGDYLLAAA---INELSKVVTDEKYKKFNFSRYVESIALGELR-QNINNR 155

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +  +   +   I   KT AL   A  +GA+   A + + +  R  G   GIIFQL DD +
Sbjct: 156 NFRLKTFRYLSIIDGKTAALFEAAYHAGALAGDADEQQIKLFRKLGRYTGIIFQLTDDCI 215

Query: 229 DCE 231
           D E
Sbjct: 216 DFE 218


>gi|149280267|ref|ZP_01886389.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39]
 gi|149228956|gb|EDM34353.1| octaprenyl-diphosphate synthase [Pedobacter sp. BAL39]
          Length = 323

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 10/217 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           + +  + I   +     +  S M +     L     Y +   GK+IR   V   A L   
Sbjct: 4   INQIKEPIAADISSFEEKFKSSMHSDAP-LLDRITHYIVKRKGKQIRPMFVFFAAKLCGG 62

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              +  R  A +E +H  +L+HDD+  +DN Y RRG  +++  +    A++ G+ LL   
Sbjct: 63  ILESTHRGAALVELLHTATLVHDDV--VDNAYERRGFFSINALWKNKIAVLVGDYLLAKG 120

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             +  +         R   ++S       +G L  Q+  ++   I E   F + + KT +
Sbjct: 121 LLLSVNNG-----EFRLLQIVSEAVKQMSEGELL-QIEKVRRMDISEDLYFDVIRQKTAS 174

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           L+   C  GA  A A     E++R FGE +GI FQ+ 
Sbjct: 175 LIASCCACGAASAGADDETIEKMRLFGEKVGIAFQIK 211


>gi|308177871|ref|YP_003917277.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
 gi|307745334|emb|CBT76306.1| putative farnesyltranstransferase [Arthrobacter arilaitensis Re117]
          Length = 368

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 94/243 (38%), Gaps = 30/243 (12%)

Query: 16  IDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-- 71
           +  +L++ L   +  +   T     +++AI     GGK++R                   
Sbjct: 25  VAQLLEEFLAAKSIEVGQITTSAVEIVNAITSLTRGGKRLRPLFAFWGYLGAGGQAEDRD 84

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVT 115
            +R+G A+E     +LIHDD+  +DN   RRG+P+VH +                Y   +
Sbjct: 85  IVRLGVALELFQAAALIHDDI--IDNSDTRRGQPSVHKRFEAQHQELELAGSARNYGMAS 142

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           AI+ G+  L+ + E+ S   +      +++ + +      + G     + +      D  
Sbjct: 143 AILTGDLCLSLSEEVFSEISSL---TAQARTIFNQMRTQVMAGQYLDVLEESAGPAYDPK 199

Query: 176 QV----FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +       I + K+           G  +A AS++  E    F   LG  FQL DD+L  
Sbjct: 200 EAVKRARTIVRFKSAKYSTENPFLLGGALAGASESLMEHYSAFALPLGEAFQLRDDVLGV 259

Query: 231 EED 233
             D
Sbjct: 260 FGD 262


>gi|255945077|ref|XP_002563306.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588041|emb|CAP86112.1| Pc20g07830 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 447

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 97/271 (35%), Gaps = 60/271 (22%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA--------- 72
            L +    +    +  L    +Y     GK +R  LV   +    ++             
Sbjct: 86  FLTKNIRQLLGSGHPALDKVAKYYTHSEGKHMRPMLVLLMSQATALDPRKHHSYTDKPSP 145

Query: 73  ------------------------------------------LRVGAAIECIHCYSLIHD 90
                                                      R+    E IH  SL+HD
Sbjct: 146 VDSSFSAPSILEDANPEMNPLVAPNADSKYDIAGDDYILPSQRRLAEITELIHTASLLHD 205

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  +DN   RR   + ++ +    A++AG+ +L  A   ++  +      + + ++ +L
Sbjct: 206 DV--IDNAVTRRANSSANLAFGNKMAVLAGDFMLGRASVALARLRDPEVTELMATVIANL 263

Query: 151 THNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
                +Q     Q  + +  + DET         +KT +L+  +C S A++  ++    E
Sbjct: 264 VEGEFMQLKNTAQD-ESKPVYTDETLSYYLQKTYLKTASLISKSCRSAAVLGRSAPEVIE 322

Query: 209 RLRCFGENLGIIFQLADDLLDC---EEDLPK 236
               +G NLG+ FQL DD+LD    E ++ K
Sbjct: 323 ASYAYGRNLGLAFQLVDDMLDYTVTEAEMGK 353


>gi|296415815|ref|XP_002837581.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633454|emb|CAZ81772.1| unnamed protein product [Tuber melanosporum]
          Length = 343

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 11/168 (6%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  +L+HDD+  +D    RRG P+ +       +I+AG+ +L  A   ++ 
Sbjct: 77  RLAEIVELIHTATLLHDDV--LDQAETRRGNPSANSLSGNKLSILAGDYMLGRASVYLAR 134

Query: 134 PKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQMLDIQDE-------FIDETQVFMIQKMK 184
            +      + ++++  L       LQ    G   D   +                   +K
Sbjct: 135 LRNPEVIELLAEVIAELVKGELLQLQNTATGTTADFTSKSSREAHLRDSLEYYLEKTYLK 194

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +L+  +C + A++  A+++   +   +G +LG+ FQL DD+LD   
Sbjct: 195 SASLISKSCRATAVLGGATEDVAAKAYSYGRHLGLAFQLVDDVLDYTS 242


>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
          Length = 219

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 4/152 (2%)

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP--KTQLKDNI 142
            SLIHDD+P MD+  +RRG+P+ H+ + E TA++AG+ L   AFE ++       +  + 
Sbjct: 1   MSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADR 60

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMA 200
             + +  L    G  G+  GQ+ D + E +      +  I   KT  L+  A  SGAI+ 
Sbjct: 61  TLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVG 120

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  E ER+R +   +G++FQ+ DD+LD   
Sbjct: 121 GGADAEVERVRRYARCVGLLFQVVDDVLDMTS 152


>gi|306836504|ref|ZP_07469475.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726]
 gi|304567594|gb|EFM43188.1| polyprenyl synthetase [Corynebacterium accolens ATCC 49726]
          Length = 359

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 34/253 (13%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTECAS 63
           +L +    +   L   L Q   H+       + +A+ +     L GGK++R         
Sbjct: 6   ELADIPGAVREKLAIFLDQRREHVAEIGAP-VSTAMSFLESFVLDGGKRVRPMYAWAGYL 64

Query: 64  LFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------- 110
                  +    LR  +++E I   +LIHDD+  +D    RRGKPTVH +          
Sbjct: 65  AAGRGSESPEAMLRAASSLEFIQACALIHDDI--IDASNTRRGKPTVHREAERLHRESDF 122

Query: 111 ------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                 +    AI+ G+  L YA ++        +   R++             +LGGQ+
Sbjct: 123 LGDPEFFGTSVAILVGDFALVYAEDMFQDSGLSPEALQRAREPWRGMRT----EVLGGQL 178

Query: 165 LDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           LDI  E      V +   + + KT A  +      GA +A A +      R +G ++GI 
Sbjct: 179 LDISLEAAGSESVALSNSVNRYKTAAYTIERPLHLGAAIAGAREELISAFRGYGHDIGIA 238

Query: 221 FQLADDLLDCEED 233
           +QL DD L    D
Sbjct: 239 YQLRDDQLGVFGD 251


>gi|289582888|ref|YP_003481354.1| polyprenyl synthetase [Natrialba magadii ATCC 43099]
 gi|289532441|gb|ADD06792.1| Polyprenyl synthetase [Natrialba magadii ATCC 43099]
          Length = 354

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 91/257 (35%), Gaps = 26/257 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQH----------NDRLLSAIRYAL-----LG 49
           +   L E    +D  + DL+ +       +            D +  A+   L      G
Sbjct: 1   MRETLAEWRPAVDEAIADLVPREIDTDYLESFFGEPTYEYDPDGIQRALSDPLWDLLDRG 60

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK+ R+ L       F  +    +      E +H  ++I DD+   D    RRG+P +H 
Sbjct: 61  GKRWRAVLFLVFIEGFGEDPTEYMPYACIPEILHNGTIIVDDVE--DQAAKRRGEPALHH 118

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A+ AGN L     +++      L    +      L   +    +  G  +   +
Sbjct: 119 IYGRDVALNAGNALYFLPLKLLRENPGDLPAEQQLAAYEMLMDELNRTHLGQGMDICWHN 178

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E    I   Q   +   KTG L        AI+     + +E +  + E   + FQ+ DD
Sbjct: 179 EREVRITPAQYLEMCACKTGCLGRIVARLAAIITDQPAHVEEAVATYAELTAVAFQIGDD 238

Query: 227 LLDCE------EDLPKK 237
           +LD E       +  K+
Sbjct: 239 ILDVENSLGRAGEFGKE 255


>gi|134101439|ref|YP_001107100.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291008114|ref|ZP_06566087.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914062|emb|CAM04175.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 345

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L    +     +   A+    A+E +H +SL+HDD+  MD    RR +PT   
Sbjct: 62  GKAIRPALALLASEAVGGSATAAVPAAVAVELVHNFSLLHDDV--MDGDRTRRHRPTAWT 119

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    A++ G+ LL+ A +++++  ++     ++  +L+      +Q ++ GQ +DI  
Sbjct: 120 VFGIGNAVLVGDVLLSLACDVLAA--SEHPSATKAIRLLTDA----VQRLVAGQFVDIAF 173

Query: 170 EFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +     Q+     + + KTGAL+  AC  G I    +  + +  R FGE +G+ FQ  DD
Sbjct: 174 QDRRAVQLDECVSMAENKTGALLGAACALGTIFGDGTAQQVDHQRAFGEGVGLAFQHVDD 233

Query: 227 LLDCEED 233
           LL    D
Sbjct: 234 LLGIWGD 240


>gi|108743210|dbj|BAE95384.1| hexaprenyl pyrophosphate synthetase [Saccharomyces bayanus]
          Length = 359

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 82/204 (40%), Gaps = 43/204 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D    RRG+PT +  +    A++AG+ LL  A   IS 
Sbjct: 148 RLAEIVEMIHTASLLHDDV--IDYSDKRRGRPTGNAAFTNKMAVLAGDFLLGRATVSISR 205

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------------------------- 167
                   + S  + +L     +Q        D                           
Sbjct: 206 LHNPEVVELMSNSIANLVEGEFMQLKNTSIDPDTDTIDNGHKLLPVPSKKLEVKEHEFRV 265

Query: 168 ----------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                      D+ I+    + I K  +KT AL+  +C   AI++ ++    +    FG 
Sbjct: 266 PSRQQGLQLSHDQLIETAFEYYIHKTYLKTAALISKSCRCAAILSGSTPAVVDECYDFGR 325

Query: 216 NLGIIFQLADDLLDCE---EDLPK 236
           NLGI FQL DD+LD     +DL K
Sbjct: 326 NLGICFQLVDDMLDFTVSGKDLGK 349


>gi|118616467|ref|YP_904799.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans
           Agy99]
 gi|183980932|ref|YP_001849223.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M]
 gi|118568577|gb|ABL03328.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium ulcerans
           Agy99]
 gi|183174258|gb|ACC39368.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium marinum M]
          Length = 335

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 23/225 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + +++    I+ ++D  L      M         S +   L GGK+ R       
Sbjct: 15  DAEFATTVRDGVASIERLMDAELRGADEVMTD-------SLLHLFLAGGKRFRPLFTVLS 67

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +  N      +  GA IE IH  +L HDD+  MD   +RRG P+ + ++    AI+AG
Sbjct: 68  AQVGPNPGADEVVIAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSANARWGNNVAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE-TQV 177
           + LL  A  ++S           +  +++ T       ++ GQM + +   E +D   Q 
Sbjct: 126 DYLLATASRLVSRLGPD------AVRIVADTFA----QLVTGQMRETRGAPEGVDMIEQY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             +   KTG L+  A   G + + A   + ERL   G  +G  FQ
Sbjct: 176 LKVVHEKTGCLIGAAGRFGGMFSGADGEQVERLNRLGGIVGTAFQ 220


>gi|118468511|ref|YP_888517.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118169798|gb|ABK70694.1| polyprenyl synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 362

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 35/261 (13%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           M+   PS + E +  +   L + L +  S   ++   + +       + L GGK++R   
Sbjct: 1   MDTAAPSAV-ELAGAVTEQLREYLRERRSDCAYIGPVYAELTAGVEEFVLRGGKRVRPAF 59

Query: 58  VTECASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI--- 109
                         V     LR+ +A+E +   +LIHDD+  +D+   RRG PTVH    
Sbjct: 60  AYWGWRSVIEPADAVAGPDVLRLFSALELLQACALIHDDV--IDDSATRRGLPTVHRLFT 117

Query: 110 -------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
                        Q+    AI+AG+  L++A +I++     +  + R Q +         
Sbjct: 118 EQHHERGWLGSERQFGLSAAILAGDLALSWADDIVAGADLPVDAHRRVQTVWRHIRT--- 174

Query: 157 QGMLGGQMLDIQDEFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRC 212
             +LGGQ LDI  E   +  V     +   KT    +    + GA  A    + +E    
Sbjct: 175 -EVLGGQYLDIVTESSGDESVASALNVNTFKTASYTVARPLQLGAAAAADRPDVQELFHR 233

Query: 213 FGENLGIIFQLADDLLDCEED 233
            G +LG+ FQL DD+L    D
Sbjct: 234 IGNDLGVAFQLRDDVLGVFGD 254


>gi|291294415|ref|YP_003505813.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279]
 gi|290469374|gb|ADD26793.1| Polyprenyl synthetase [Meiothermus ruber DSM 1279]
          Length = 336

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 83/227 (36%), Gaps = 10/227 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVTECASLFNVNH 69
            ++   +   LL      +      L    R    Y   GGK +R  L+      +  + 
Sbjct: 8   AQVRAAIQQYLLDALPKPEAATRLELAQFARMLRDYPERGGKMLRGTLLVYTGLAYGASL 67

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L V AA+E    ++LIHDD+   D    RRGKP +H  Y    A+ AG+ L    + 
Sbjct: 68  EGVLPVAAALELFQNWALIHDDIE--DASDERRGKPALHKLYGVPLALNAGDALHARQWA 125

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           ++          +  + +  +      Q +    M   + +  +   + M+ +       
Sbjct: 126 LLVEAGASRA--VLLEFVRMVEQTAQGQHLEMSWMEGQRFDLGEPDYLEMVGQKAAYYTA 183

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                 GA+ A A           G  LGI FQ+ DD+L+   D  K
Sbjct: 184 VAPLRLGALAAGAEPPAI--FSEAGLKLGIGFQIVDDVLNLMGDPAK 228


>gi|313619081|gb|EFR90887.1| geranyltranstransferase [Listeria innocua FSL S4-378]
          Length = 188

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 101/179 (56%), Gaps = 6/179 (3%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            +LD+ L +  +    +   +L  ++ Y++  GGK+IR  LV       N+  +  L+  
Sbjct: 13  KVLDESLFKEINMRNIE--PKLKESMLYSVQAGGKRIRPMLVFATLQALNIEPMRGLKTA 70

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
            A+E IH YSLIHDDLP+MD+   RRGK T H  Y + TAI+AG+ LLT AF I++  + 
Sbjct: 71  TALEMIHTYSLIHDDLPAMDDDDYRRGKWTNHKIYGDATAILAGDALLTLAFSILAEDEN 130

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFAC 193
            L    R  L+  ++++ G +GM+GGQ  D++ E   +   ++  I   KTG L+ FA 
Sbjct: 131 -LSFETRIALINQISYSSGAEGMVGGQQADMEAENKQVTLEELASIHARKTGELLIFAV 188


>gi|242011677|ref|XP_002426574.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus
           humanus corporis]
 gi|212510711|gb|EEB13836.1| Decaprenyl-diphosphate synthase subunit, putative [Pediculus
           humanus corporis]
          Length = 262

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 8/159 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V    E IH  SLIHDD+  +D    RRGKP+V++ ++     +AG+ +L  A  +I+ 
Sbjct: 11  DVAMIAEMIHSASLIHDDV--IDQSDFRRGKPSVNVLWNHKKVTMAGDFILAVASMMIAR 68

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +        SQ++  L     +      Q+   + E             KT +L+  + 
Sbjct: 69  LRDDKVTLTLSQVVTDLVQGEFM------QLGSKETENERFAHYLTKTYRKTASLIANSA 122

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++ A++A A ++  E    +G N+G+ FQL DDLLD   
Sbjct: 123 KAVAMLAGADESLSEVAFQYGRNIGLAFQLVDDLLDFVS 161


>gi|294811347|ref|ZP_06769990.1| Putative geranylgeranyl diphosphate synthase [Streptomyces
           clavuligerus ATCC 27064]
 gi|326439921|ref|ZP_08214655.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294323946|gb|EFG05589.1| Putative geranylgeranyl diphosphate synthase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 395

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 93/245 (37%), Gaps = 21/245 (8%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQ-HNDRLLSAIRYALL-GGKKIRSFLVTECAS 63
           P  L     +++ ++++ L   A+      H   ++  +R  L  GGK++R  L      
Sbjct: 47  PIDLTVVRDQVEQVVEEFLAAKAAAASGAGHPPEVVRILRDFLASGGKRLRPLLCVVGWH 106

Query: 64  LFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH------------- 108
               +   A  L V A++E    + LIHDD+  +D+  +RRG+P VH             
Sbjct: 107 AAGGDEDPAAVLPVAASLELYQTFVLIHDDI--IDDSALRRGRPAVHRALAARHVGHDSA 164

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +     A++AGN  L +  E++ + +           +        + G     +   +
Sbjct: 165 ARLGAGEALLAGNLALIWCQELLHTAELDTPRRAAVHRVNDTMLAEVMFGQYRDLLGTER 224

Query: 169 DEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  D      I + KT A  +    + G       +        FG  LG  FQL DDL
Sbjct: 225 LDD-DIEAALGIIRYKTAAGTIQRPLQLGVAAGGGDEETHRFCTEFGVPLGEAFQLRDDL 283

Query: 228 LDCEE 232
           LD   
Sbjct: 284 LDVFG 288


>gi|297565930|ref|YP_003684902.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946]
 gi|296850379|gb|ADH63394.1| Dimethylallyltranstransferase [Meiothermus silvanus DSM 9946]
          Length = 319

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 22/231 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           + S L+      +  L +L+      ++   +D +         GGK++R  L    +  
Sbjct: 6   VTSDLEPLLNTFEEYLRELVRSDVEFIRLIEDDLV-------TAGGKRVRPQLAFLASRA 58

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   + +  A+E +H  +L+HDDL  +D+   RRG      +Y    +++AG+   
Sbjct: 59  LGGVPYE-MELALAVELLHSTTLLHDDL--VDDAETRRGHVAAFRKYGNAVSVLAGDY-- 113

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQ 181
                     +     +I  ++ L    +   + +   ++L  Q   + +        I 
Sbjct: 114 -------LLSRLLYLLSITGRMELVYMFSEVARELAESEVLQFQIAALGDYSFEAYERII 166

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT +LM  ACE  A++ +A    ++ L  FG   G  FQ+ DD LD   
Sbjct: 167 TGKTASLMRLACEGAAVLGNAPSEWRQALADFGLFYGQAFQMRDDYLDLMG 217


>gi|115739673|ref|XP_781598.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115924911|ref|XP_001192439.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 300

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 8/159 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++    E IH  SL+HDD+  +D    RRGK +++  + +  +I+AG+ +L+ + + ++ 
Sbjct: 49  KIAMITEMIHTASLMHDDV--IDAADTRRGKTSINELFGQRKSILAGDFVLSISSQALAR 106

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   + S ++  L     +      Q+    +E    +   M    KT +LM  +C
Sbjct: 107 IGDPDVVIVLSTVIEDLVKGEFM------QLGSKDNENERFSHYLMKTYKKTASLMAHSC 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + A++A  S    E    +G N+G+ FQL DD+LD   
Sbjct: 161 RAVAMLADCSPEVCEIAYQYGRNIGMAFQLVDDILDFVS 199


>gi|256825427|ref|YP_003149387.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
           20547]
 gi|256688820|gb|ACV06622.1| geranylgeranyl pyrophosphate synthase [Kytococcus sedentarius DSM
           20547]
          Length = 362

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 92/249 (36%), Gaps = 27/249 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRS-FLVTECASLFN 66
                 I   +   +    +H+       D L  AI   + GGK++R  FL     +   
Sbjct: 8   DAFQATISASITAQIADHRAHLTPIDPAADELAQAIESLMQGGKRLRPGFLTWGHVAAGG 67

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY--------------- 111
                 L+   A+E     +L+HDD+  MD+   RRG P  H  +               
Sbjct: 68  SADEATLQAATAMEFFQAAALLHDDV--MDDSDTRRGTPAAHRVWAQRHREHAFEGSPED 125

Query: 112 -DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-----MLGGQML 165
                AI+AG+  L +A    +    + +  +R++   +L     + G     +   +  
Sbjct: 126 HGIAGAILAGDLCLVWADAAFTGCGWEPEQMLRARPTWNLMRTQLMAGQFLDILNAARPW 185

Query: 166 DIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           +  D      +V  + + K+    +      GA  A      ++ L  +G +LG+ FQL 
Sbjct: 186 ETLDTDARHERVRRVMQYKSAKYSIEHPLLIGADAAGVDPTTRQHLSDYGLHLGLAFQLR 245

Query: 225 DDLLDCEED 233
           DD+L    D
Sbjct: 246 DDVLGVYGD 254


>gi|238060507|ref|ZP_04605216.1| type I phosphodiesterase, nucleotide pyrophosphatase
           [Micromonospora sp. ATCC 39149]
 gi|237882318|gb|EEP71146.1| type I phosphodiesterase, nucleotide pyrophosphatase
           [Micromonospora sp. ATCC 39149]
          Length = 658

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 91/244 (37%), Gaps = 27/244 (11%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHLT 71
             R+D  L   L + A          + +A+ R+ L GGK++R                 
Sbjct: 313 RTRVDAELAAFLDRQAPDWPDGAPRGVFTALHRFVLAGGKRLRPQFCYWGWRGAGGEDGG 372

Query: 72  -----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------Q 110
                 L   AA+E  H ++LIHDD+  +D    RRG P+VH                  
Sbjct: 373 EDGSPILVASAALELFHAFALIHDDI--LDRSDRRRGAPSVHRLFADLHARSAWRGDPEA 430

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           Y   TA++ G+    +A ++      +  + +R   + +L     + G     +  + D 
Sbjct: 431 YGRNTALLCGDLCAAWADQMFHECGLRRDELLRGYAVFALMRTEVIAGEYLDLVSGVGDG 490

Query: 171 FIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +       + ++K     +    + GA +A         L  FG+ LG  FQL DD+L 
Sbjct: 491 SV--ASALTVIRLKAARYTVTRPLQIGAALAGGPPELAAALAEFGDPLGDAFQLRDDVLG 548

Query: 230 CEED 233
              D
Sbjct: 549 VFGD 552


>gi|300780819|ref|ZP_07090673.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030]
 gi|300532526|gb|EFK53587.1| polyprenyl synthetase [Corynebacterium genitalium ATCC 33030]
          Length = 368

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 96/250 (38%), Gaps = 37/250 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTECASLFNV-- 67
             +   L+    +    +       +  A+ +     L GGK+IR           N   
Sbjct: 18  AAVQRELEKFFTEHGPSVDVIGPP-VSEAVEHLRTFVLGGGKRIRPTFGWVGFVGANGLE 76

Query: 68  ----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------- 109
               +    L   +++E I   +LIHDD+  +D    RRG PTVH+              
Sbjct: 77  NTEEDPAAVLCAVSSLEFIQACALIHDDI--IDASATRRGNPTVHVAAAHSHREHNWLGD 134

Query: 110 --QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++ E  AI+ G+  L +A ++           +R+              ++GGQ+LDI
Sbjct: 135 SDKFGESLAILVGDLALVWADDMWHHSGLSHAALLRASEPWRGMRT----EVIGGQILDI 190

Query: 168 QDEFI---DETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             E      E     + + KT A  +      GA +A A  +    LR +G ++GI FQL
Sbjct: 191 SLEAAGCESEELANAVNRFKTAAYTIERPLHLGAAIAGADDDTIAALRRYGHDIGIAFQL 250

Query: 224 ADDLLDCEED 233
            DD+L    D
Sbjct: 251 RDDILGVFGD 260


>gi|149193697|ref|ZP_01870795.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135650|gb|EDM24128.1| Polyprenyl synthetase [Caminibacter mediatlanticus TB-2]
          Length = 287

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 19/186 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  ++T         +  A ++ A +E IH  SL+HDD+  +D    RRG  +++ 
Sbjct: 23  GKGIRGKIITII-------NPNAKKLAAIVEGIHLASLLHDDV--IDEADTRRGVKSINA 73

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y + TA++ G+ + +  F  +     ++        ++S    +  +G L    L  ++
Sbjct: 74  KYGDFTAVMLGDIIYSTCFYDLVDFDKEVA------KIISNAVRLLSEGELEDVKL-SKN 126

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +D+ +   +   KT +L+  +C++ A +++      E+   +G N+GI FQ+ DDLLD
Sbjct: 127 INLDKDKYMQMIYKKTASLIEASCKASAFLSNYD---VEKFGTYGRNIGIAFQIIDDLLD 183

Query: 230 CEEDLP 235
             +D  
Sbjct: 184 IIQDSK 189


>gi|223040963|ref|ZP_03611224.1| prenyl transferase [Campylobacter rectus RM3267]
 gi|222877760|gb|EEF12880.1| prenyl transferase [Campylobacter rectus RM3267]
          Length = 297

 Score =  139 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 15/173 (8%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                +L++ A IE IH  SL+HDD+  +D+   RRG P+++  +    A++ G+ L + 
Sbjct: 43  GQSEQSLKICAIIELIHLASLLHDDV--IDDAGTRRGSPSINASFGAKNAVMLGDILYSK 100

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
            F  +S    ++   I           + +  M+  ++    +E I       +   KT 
Sbjct: 101 GFYELSKFPHEIAGEISGA-----VSKLSVGEMMDVELSAKFNENI--AAYETMIYYKTA 153

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            L+  A   GA++      E    + +G+NLG+ FQ+ DD+LD  +D   L K
Sbjct: 154 VLIEAAAAVGAMLVGL---ETRNFKIYGKNLGLAFQIIDDILDVTQDAATLGK 203


>gi|302418638|ref|XP_003007150.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum
           VaMs.102]
 gi|261354752|gb|EEY17180.1| decaprenyl-diphosphate synthase subunit 1 [Verticillium albo-atrum
           VaMs.102]
          Length = 451

 Score =  139 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 93/249 (37%), Gaps = 58/249 (23%)

Query: 42  AIRYALLGGKKIRSFLVTECASL------------------------------------- 64
           A  Y    GK IR  +V   A                                       
Sbjct: 113 AKYYTHAEGKHIRPLVVLLMARATALCPKAERQAPTQTYAGINSPISPDGILSDVNPTSP 172

Query: 65  FNVNHLTA-----------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           F    L              R+    E IH  SL+ DD+  +D+   RRG P+ ++++  
Sbjct: 173 FTGPPLDPQQSNSDILPSQRRLAEITELIHTSSLLRDDV--IDHSVSRRGSPSANLEFSN 230

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             A++AG+ LL  A   ++  +      + + ++ +L    G    L     D ++    
Sbjct: 231 KMAVLAGDFLLGRASVALARLRDAEVIELLATVIANLVE--GEFMQLKNTAQDERNPAWS 288

Query: 174 ET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +           +KT +L+  +C + A++ +A     E    +G+NLG+ FQL DD+LD 
Sbjct: 289 QEAVDYYLRKTYLKTASLISKSCRASALLGNADAATVEAAYAYGKNLGLAFQLVDDMLDY 348

Query: 231 ---EEDLPK 236
              E+DL K
Sbjct: 349 TRSEKDLGK 357


>gi|325479330|gb|EGC82426.1| putative geranyltranstransferase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 274

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 15/237 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           MN        +N   ID  +                 ++  A+ Y++  GK++R+ L  E
Sbjct: 1   MNKEYKEIFLQNKNLIDQEIAKYFN---------SESKIEEAMLYSMEDGKRVRATLFLE 51

Query: 61  CASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              L              AIE I  YSL+HDDLP+MD+   RRGK +VH  + E   I+ 
Sbjct: 52  TRKLSLKEISKNDFLFALAIEMIQAYSLVHDDLPAMDDDDYRRGKESVHKHFGEDLGILT 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVF 178
           G+ LL  A +II          + + + L     +GL GM+ GQ+LD++     D+  + 
Sbjct: 112 GDALLNEASKIIMEVSLNDPSYLSAGVYLL--EKVGLSGMIEGQILDLRRRNNYDKDFLI 169

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +   KT         +  ++   S  E   L  +   LG+ FQL DDLL  EED  
Sbjct: 170 EVYDKKTADFFKACTVAAGLVNGFSDQEIMSLENYAYYLGLGFQLQDDLL--EEDYG 224


>gi|311113328|ref|YP_003984550.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC
           17931]
 gi|310944822|gb|ADP41116.1| geranylgeranyl pyrophosphate synthase [Rothia dentocariosa ATCC
           17931]
          Length = 380

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 101/267 (37%), Gaps = 36/267 (13%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV 58
           ++ G+ S+ +   + ++  + +   Q  + +    +D   LL AI     GGK++R+ L 
Sbjct: 10  LSDGVKSEQEAYLRAVEATMSEFFAQQRTLLTAISHDALPLLEAIESLSSGGKRLRALLS 69

Query: 59  TECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ- 110
                    +           +R GAA+E     +LIHDD+  +D    RRGKP+VH + 
Sbjct: 70  YWGWRGAGGDSILEGSAPAPIIRAGAALELFQSAALIHDDI--IDRSDTRRGKPSVHKKF 127

Query: 111 ---------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
                          Y     IIAG+  L+++ ++ SS          ++ +        
Sbjct: 128 ETQHIQNSWVGDTFNYGLTGGIIAGDLCLSWSEQMFSSIGEGALSGTEARNIFDTMRTEV 187

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA---------SQNE 206
           + G     + ++      E  +    ++       ++CE   ++  A             
Sbjct: 188 MAGQYLDVLSEVIPAETPENALARAHRVIQYKSAKYSCEHPLVLGGALALTAIAHQDHPI 247

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
             + R FG  LG  FQL DD L    +
Sbjct: 248 LGKYRAFGLPLGEGFQLRDDELGVFGE 274


>gi|291004284|ref|ZP_06562257.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 370

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 26/243 (10%)

Query: 15  RIDTILDDLLLQ---TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----ECASLFNV 67
           R+   L D L      +  +       +   +R+ L GGK+IR               + 
Sbjct: 20  RVQETLADYLRTRRTQSRELDAAFATAVDELVRFVLGGGKRIRPTFAWWGWRAAGGAADG 79

Query: 68  NHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQ 110
               A+ R  +++E +   +L+HDDL  +D+   RRG PTVH                 Q
Sbjct: 80  PQAQAMLRAASSLELLQACALVHDDL--IDDSDTRRGNPTVHQAFAALHRHQRWNGEDRQ 137

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +    AI+ G+  L +A +++ +     +   R            L G     +  ++ +
Sbjct: 138 FGMAAAILLGDLALAWADDMLHASGLPPEAMARGLRPWRAMRTEVLAGQYLDLLGPVRGD 197

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +  + + +       +    E GA +A A +   E LR FG ++G+ FQL DDLL  
Sbjct: 198 ETPQAALRIDELKSASYTVQRPLELGAELAGADETALEALRRFGSDIGVAFQLRDDLLGV 257

Query: 231 EED 233
             D
Sbjct: 258 FGD 260


>gi|218294793|ref|ZP_03495647.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
 gi|218244701|gb|EED11225.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
          Length = 315

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 87/227 (38%), Gaps = 16/227 (7%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P  L+      +  L +L+      ++  H D +         GGK+IR  LV   +   
Sbjct: 4   PLPLEAKLAAFEEALSELVRSEVLFVRLIHQDLV-------TAGGKRIRPRLVFLASGAV 56

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                      A    +H  +L+HDDL  +D   +RRGK   + +Y    ++++G+ LL+
Sbjct: 57  GGAPFELELALAVE-LLHSATLLHDDL--IDEAELRRGKEAAYRRYGNAVSVLSGDFLLS 113

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
               +++   +       ++    L     LQ  +         E         I   KT
Sbjct: 114 RLLHVVAKTGSLELVEAFAETARVLAEGEVLQFQVAAL------EDYSLENYERIITAKT 167

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ALM  A E  A++       +E LR FG   G  FQ+ DD LD   
Sbjct: 168 AALMALATEGPALLKGLKGAWREALRRFGLLYGQAFQMRDDYLDLMG 214


>gi|253752432|ref|YP_003025573.1| polyprenyl synthetase [Streptococcus suis SC84]
 gi|253754258|ref|YP_003027399.1| polyprenyl synthetase [Streptococcus suis P1/7]
 gi|253756192|ref|YP_003029332.1| polyprenyl synthetase [Streptococcus suis BM407]
 gi|251816721|emb|CAZ52363.1| polyprenyl synthetase [Streptococcus suis SC84]
 gi|251818656|emb|CAZ56491.1| polyprenyl synthetase [Streptococcus suis BM407]
 gi|251820504|emb|CAR47259.1| polyprenyl synthetase [Streptococcus suis P1/7]
 gi|292559037|gb|ADE32038.1| Polyprenyl synthetase [Streptococcus suis GZ1]
 gi|319758838|gb|ADV70780.1| polyprenyl synthetase [Streptococcus suis JS14]
          Length = 329

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 9/225 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-L 73
            I+  L+++     S M   H       + Y    GK +R+ L    A +       + L
Sbjct: 11  EIERGLEEVKSIILSEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              A +E +H  +LIHDD+  +D    RRG    H Q+    AI  G+ LL Y+  +   
Sbjct: 71  YFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLF-- 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMC 190
               L+    S+  L L ++  ++ +L G   Q+L+  D  +         + KT  L  
Sbjct: 127 -GKGLRLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFG 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            AC+ G+ +   S+ +       G+ LG+ FQL DDL+D + D+ 
Sbjct: 186 LACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVA 230


>gi|229816079|ref|ZP_04446400.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM
           13280]
 gi|229808393|gb|EEP44174.1| hypothetical protein COLINT_03135 [Collinsella intestinalis DSM
           13280]
          Length = 355

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 96/241 (39%), Gaps = 15/241 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGG-KKIRSFLV 58
               + L++    I+  L +      SH      D    L + + +   GG K++R  L 
Sbjct: 10  ESFVAYLKDRLPLIERALHEADAVAMSHEGAPTEDLDRYLYAPLAHFTAGGGKRVRPVLA 69

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A         AL  G AIE     +LIHDD+   D   +RRG+P ++       AI 
Sbjct: 70  LLGAEAVGGCADQALSCGVAIELFQSAALIHDDIA--DASELRRGEPCLYRTEGLGLAIN 127

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFID 173
           AG+  LT  FEI+ +  + L    R +++  L      +  L GQ LD+         + 
Sbjct: 128 AGDLALTRVFEIVLADGS-LPAERRVRVLEELVRME--RHTLEGQALDLGWARDGRWDVT 184

Query: 174 ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 +   KT    +     +GA+ A A  +    L   G   G+ FQL DDLL+   
Sbjct: 185 SDDYLYMIDGKTAWYTVASPLYAGALAAGAEPDAVRGLIEVGLPAGLAFQLQDDLLNLVG 244

Query: 233 D 233
           D
Sbjct: 245 D 245


>gi|229823651|ref|ZP_04449720.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271]
 gi|229786888|gb|EEP23002.1| hypothetical protein GCWU000282_00952 [Catonella morbi ATCC 51271]
          Length = 325

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 8/228 (3%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E+   I   L  +     S +Q +  D     + Y    GK +R+ L    A L    
Sbjct: 5   IWESLPYIQEELVAVKALMKSELQLKIPDVREKILAYMDAPGKYLRAGLCLAMAQLTPEG 64

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              + R + AAIE +H  +LIHDD+  +D    RRG   +HIQ     AI AG+ L+TYA
Sbjct: 65  ITQSKRYIAAAIEVLHLATLIHDDV--IDEADTRRGIEALHIQKSNRLAIYAGDYLMTYA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             +I   + +   N     ++       L G L  Q+ +   + +         + KT  
Sbjct: 123 ARLIQKSQQEFDRNPLDAWVMEG----ILIGELN-QLANQYRQGMTMYDYLRQIRGKTAL 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           L   A   G      S  +  +    G+ +G+ FQL DDL+D + D  
Sbjct: 178 LFAAATFFGYYSLSQSALQNRQAFYLGQAIGMAFQLRDDLIDYQVDAK 225


>gi|227499442|ref|ZP_03929553.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC
           35098]
 gi|227218504|gb|EEI83747.1| possible geranyltranstransferase [Anaerococcus tetradius ATCC
           35098]
          Length = 275

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 9/216 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-ALRVGAAIECI 82
           LL        +    +  A+ YAL  GK+IR+ L  E   L         L    AIE I
Sbjct: 16  LLDDEIKTYIKGESLIEEAMLYALEAGKRIRASLFLETRRLSRNQIDKNDLLFALAIEMI 75

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             YSL+HDDLP+MD+   RRGK ++H  + E   I+ G+ LL  A +++    ++    I
Sbjct: 76  QAYSLVHDDLPAMDDDDYRRGKESLHKHFGEDLGILTGDALLNEATKLMFEIASRDSSFI 135

Query: 143 RS-QLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           ++ Q +LS T   G  GM+ GQ+LD  +    ++  +  +   KT      A  +GA++ 
Sbjct: 136 KASQYLLSKT---GKDGMIEGQILDLRRRRNYNKDFIIEVYDKKTADFFKGAIVAGALVN 192

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLL--DCEEDL 234
              Q+    L  +   LG+ FQ+ DDLL  D   D 
Sbjct: 193 GFDQDTINSLERYAYYLGLGFQIQDDLLEKDY-GDE 227


>gi|91978222|ref|YP_570881.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
 gi|91684678|gb|ABE40980.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
          Length = 288

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-HLTA 72
           RI+  L + L Q           RL +A+R A+   G ++R  L    A     +     
Sbjct: 6   RIERALTEALSQADL---AGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPAAT 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
              GAA+E +HC SL+HDDLP  D   IRRG+P+VH  + E  A++ G+ L+  AF+ I+
Sbjct: 63  EAAGAALELMHCASLVHDDLPCFDGADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQTIA 122

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
                    ++   ++     + L G++ GQ  + +     E  +    + KTGAL   A
Sbjct: 123 RVNCAPDRLLKLTQVVGGAVGVPL-GIVAGQAWECE----SEINLAHYHRSKTGALFVAA 177

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             +GA  A A     E  R  GE +G  +Q+
Sbjct: 178 TAAGAASAGADP---EPWRLVGEKIGEAYQV 205


>gi|50285865|ref|XP_445361.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524665|emb|CAG58267.1| unnamed protein product [Candida glabrata]
          Length = 471

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 78/204 (38%), Gaps = 43/204 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D    RRG+P+ ++ +    A++AG+ LL  A   IS 
Sbjct: 175 RLAEIVEMIHTASLLHDDV--IDYSDTRRGRPSGNVAFSNKMAVLAGDFLLGRATVAISR 232

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ------------------------------------ 157
            K      + S  + +L     +Q                                    
Sbjct: 233 LKNPEVVELMSNSIANLVEGEFMQLKNMAVEDQPLVGSKNDKILPPPSKKLELKEHDYRV 292

Query: 158 --GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                 G     +   I          +KT AL+  +  + AI++ A     E    FG 
Sbjct: 293 ATPEATGSFSHEEVINIAFEYYLHKTYLKTAALISKSSRAAAILSGARDPVIEECYSFGR 352

Query: 216 NLGIIFQLADDLLDCE---EDLPK 236
           N+GI FQL DDLLD     +DL K
Sbjct: 353 NIGICFQLVDDLLDFSVSAKDLGK 376


>gi|223933610|ref|ZP_03625590.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
 gi|330833373|ref|YP_004402198.1| polyprenyl synthetase [Streptococcus suis ST3]
 gi|223897736|gb|EEF64117.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
 gi|329307596|gb|AEB82012.1| Polyprenyl synthetase [Streptococcus suis ST3]
          Length = 329

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 9/225 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-L 73
            I+  L+++     S M   H       + Y    GK +R+ L    A +       + L
Sbjct: 11  EIERGLEEVKSIILSEMMVLHPAVTSKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              A +E +H  +LIHDD+  +D    RRG    H Q+    AI  G+ LL Y+  +   
Sbjct: 71  YFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLF-- 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMC 190
               L+    S+  L L ++  ++ +L G   Q+L+  D  +         + KT  L  
Sbjct: 127 -GKGLRLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFG 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            AC+ G+ +   S+ +       G+ LG+ FQL DDL+D + D+ 
Sbjct: 186 LACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVA 230


>gi|257076714|ref|ZP_05571075.1| geranylgeranyl pyrophosphate synthase [Ferroplasma acidarmanus
           fer1]
          Length = 352

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 18/245 (7%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              L     +I+  L+       +    T+  D ++    + L GGK++R  L+    ++
Sbjct: 9   KKTLDGLKDKINAQLEAYFNFKLNECDDTRIKDIIIKLRDFTLNGGKRLRPILMIMGYNM 68

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------QYD 112
           F+      ++   +IE    + LIHDD+  MD   +RRGKP+ H             +  
Sbjct: 69  FSGQDERIIKASISIELAQSFLLIHDDI--MDQSDMRRGKPSFHKAVEGSLDGNDATRIA 126

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           E  AI AG+ + T++ E +     +L++ + +    S       +G +      I++ + 
Sbjct: 127 ENLAISAGDLIDTFSHEALLRSGFELENLLDADFEFSRIIEDTGKGQILDIYSSIENLY- 185

Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            E ++  +  +KT    +      GA ++  ++   + ++ FG+  GI FQL DD+L   
Sbjct: 186 SEERLTKLHFLKTARYTVQGPLLMGAYLSG-NKKYIQEIKDFGKYAGIAFQLYDDMLGIF 244

Query: 232 EDLPK 236
               K
Sbjct: 245 GVEEK 249


>gi|326476521|gb|EGE00531.1| hexaprenyl pyrophosphate synthetase [Trichophyton tonsurans CBS
           112818]
 gi|326484900|gb|EGE08910.1| hexaprenyl pyrophosphate synthetase Coq1 [Trichophyton equinum CBS
           127.97]
          Length = 491

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   I+ 
Sbjct: 233 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIAR 290

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      +   +M +L    G    L   MLD  +    E           +K+ +L+ 
Sbjct: 291 LRDPEVIELLGTVMANLVE--GEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLIS 348

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++  +  +  E    FG NLG+ FQL DD+LD     E+L K
Sbjct: 349 KSCRAAALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGK 397


>gi|253574559|ref|ZP_04851900.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp.
           oral taxon 786 str. D14]
 gi|251846264|gb|EES74271.1| heptaprenyl diphosphate synthasecomponent II [Paenibacillus sp.
           oral taxon 786 str. D14]
          Length = 326

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 10/234 (4%)

Query: 5   LPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           L   L    + +D  L++++         +Q    ++  IR    GGK+IR  +V   + 
Sbjct: 3   LEETLNIPLRTVDRELENMVKYDRDVPRSSQLAKAIVELIR---SGGKRIRPLMVIVGSR 59

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +     R+ AA E IH  SLIHDD+  +D+  +RRG+  +HI+     A+  GN 
Sbjct: 60  FGPDPDEKKVWRLAAAAEFIHAASLIHDDI--IDDSPMRRGQKAMHIKLGVSGALHVGNY 117

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           +     E+IS    + +  +     L+ T    L      Q+  + D  +   +     K
Sbjct: 118 MSARVIELISVYSAEREKFVYDLSSLATTK---LCLGEYQQLSHLFDYDVTIDEYLEKSK 174

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            KT  LM    + GA  A A     E L  FGE LG+ FQ+ DD+LD  +   K
Sbjct: 175 NKTAQLMATCLQIGAKAAGADTETAELLYSFGEKLGMSFQIRDDVLDYTQSAEK 228


>gi|254392179|ref|ZP_05007366.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326444821|ref|ZP_08219555.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705853|gb|EDY51665.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 362

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 94/245 (38%), Gaps = 24/245 (9%)

Query: 9   LQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVT--ECASL 64
           L  N + ++T L+  L+ +  +  +      ++  +R +   GGK++R  L      A  
Sbjct: 14  LLANRRAVETCLEGFLVGKQRAAAEHCMPAEVVQTLRNFVFAGGKRLRPLLCICGWYAGG 73

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------- 111
              +    ++  A++E  H ++LIHDDL  MD+   RRGKPTVH                
Sbjct: 74  GAGDMAAVVQAAASLEMFHAFALIHDDL--MDHSDTRRGKPTVHRSLAAHHSALRGQEAA 131

Query: 112 ---DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  AI+ G+  L ++ E++ +             ++       + G     +    
Sbjct: 132 SHLGTGGAILVGDLALAWSDELLHTAGLTPDRLAAVLPVIDGMRTEVMYGQYLD-LCAAG 190

Query: 169 DEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           D  +D      + + KT    C      GA +A A     E    +   LG  FQL DDL
Sbjct: 191 DPTLDLDAALTVARYKTAKYTCERPLHIGASLAGAGLAVLEACTAYALPLGEAFQLRDDL 250

Query: 228 LDCEE 232
           L    
Sbjct: 251 LGVYG 255


>gi|145500940|ref|XP_001436453.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403592|emb|CAK69056.1| unnamed protein product [Paramecium tetraurelia]
          Length = 366

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 8/195 (4%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++  Y    GK IR  L    A+    N           A IE +H  SL+HDD+  +D 
Sbjct: 72  ASTHYFSKEGKLIRPMLNLLYANHIEKNSQHTEQQRIWAAVIEILHVASLVHDDI--LDA 129

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG P+ H  + +  A  + N L+  A   IS         I SQ+M +LT+   LQ
Sbjct: 130 SDTRRGIPSSHTIFGKHRATFSANYLIGRAGRKISELDDIRMFQIYSQIMDNLTNGEYLQ 189

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            M   Q      E I      +    KT AL+  + +    + +      E+    G +L
Sbjct: 190 AM--KQKSFHNFE-ITLQNYMIKTYYKTAALIANSLQGVCQLTNIKDEICEKSFNIGLHL 246

Query: 218 GIIFQLADDLLDCEE 232
           G+ FQ+ DD+LD   
Sbjct: 247 GVAFQIIDDVLDYTS 261


>gi|257456101|ref|ZP_05621302.1| polyprenyl synthetase family protein [Treponema vincentii ATCC
           35580]
 gi|257446487|gb|EEV21529.1| polyprenyl synthetase family protein [Treponema vincentii ATCC
           35580]
          Length = 334

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 11/242 (4%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALL--GGKKIRSFL 57
           MN     +L     +I+  L    L    +  ++ N   LLSA   +L+  GGK+ R  L
Sbjct: 1   MNDEFTQRL----AKIECALHSAFLPDMPNAASELNPIALLSAPCASLVAGGGKRWRPLL 56

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                 L   +      +   IE IH  SLIHDD+   DN  +RRG+P  H+ Y   +A+
Sbjct: 57  AVLAYQLAGGSGEEIYTLTPLIEGIHTASLIHDDIE--DNSELRRGQPAAHVAYGLDSAL 114

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
            +G+ L   A   + + +      +      L+    +     L          F     
Sbjct: 115 NSGSWLYFQALGSLEAYRAPANVKLDLYAAALTHIRALHEGQALDIHWHRTAGFFPSRKD 174

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-EEDLP 235
              + ++KTGAL   A  +G   A  +  E        E  G+ FQ+ DD  +    +  
Sbjct: 175 YERMIRLKTGALAALAAYTGMRAAGKAHEESAAFASLFEAAGVGFQILDDAKNISAGNAG 234

Query: 236 KK 237
           KK
Sbjct: 235 KK 236


>gi|190346389|gb|EDK38464.2| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 475

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 38/205 (18%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N       R+   +E IH  SL+HDD+  +D    RRG+P+ ++ +    A++AG+ L
Sbjct: 172 ASNGILPKQRRLAEIVEMIHTASLLHDDV--IDMSDARRGRPSGNVAFTNKMAVLAGDFL 229

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ--GMLGGQMLDIQDEFIDE------- 174
           L  A   I+  +      + S  + +L     +Q    +  Q  DI +    +       
Sbjct: 230 LGRASVAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVLNQSSDINNGGESKPVPTPTG 289

Query: 175 ---------------------------TQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
                                              +KT +LM  +  + A+++ A  +  
Sbjct: 290 KVPTKQHEYSVQTPADVDHETNVNAAFEYYLHKTYLKTASLMSKSARAAAVLSGAQDDVV 349

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
           +    FG NLG+ FQ+ DD+LD   
Sbjct: 350 QNCYDFGRNLGLCFQIVDDMLDYTS 374


>gi|170781757|ref|YP_001710089.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156325|emb|CAQ01473.1| putative polyprenyl synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 373

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 91/262 (34%), Gaps = 43/262 (16%)

Query: 15  RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTE------------ 60
            + T LDD L   A+ ++    D   +       L GGK+ R+                 
Sbjct: 10  HVQTRLDDFLTAQAAGLREISPDLVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSP 69

Query: 61  CASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------ 111
                          + V A +E  H  +LIHDD+  +D    RRG+P  H ++      
Sbjct: 70  AGRPQGEERPGYRAVVGVAAGLEIFHAAALIHDDI--IDRSDTRRGRPAAHRRFEALHAA 127

Query: 112 ----------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                      E  A + G+ LL ++ E++      L D   ++   +    +  Q  LG
Sbjct: 128 SGWGGSSAGFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELATMRTQVTLG 187

Query: 162 GQM-------LDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCF 213
             +            E     +   +   K+    +      GA +A A+  +   LR  
Sbjct: 188 QYLDVLEEVAWPTVPEDDTLARAHNVIVYKSAKYSIEAPLVVGASLAGATPEQVAALRAV 247

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
           G  LGI FQL DD+L    D  
Sbjct: 248 GLPLGIAFQLRDDVLGVFGDSA 269


>gi|326692210|ref|ZP_08229215.1| heptaprenyl diphosphate synthase, component II, putative
           [Leuconostoc argentinum KCTC 3773]
          Length = 324

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 11/226 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + E    +   L  +L + A+       D + +AIR  L  GK +R  L    + L    
Sbjct: 1   MWEQFPELSEPLVAVLNRMATSWHIGFED-IDTAIRSQLNAGKLVRPALTLIFSKLTTTP 59

Query: 69  H-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A+++GA++E +H  +LIHDD+  +D   +RRG  ++  ++ + TA+ AG+ LLT  
Sbjct: 60  YNQQAIQLGASVELLHLATLIHDDI--IDESKLRRGYESIQSRFGKDTAVYAGDYLLTGM 117

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           F ++        + +    +  +     +      Q     +            K KT A
Sbjct: 118 FSLLEQTSLPQANQLALTALQDILFGELV------QKHHRFNVDATFDTYLSQIKGKTAA 171

Query: 188 LMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   +   G I   A + + ++ +   GENLGI FQL DD LD E 
Sbjct: 172 LFKLSVTFGLISGQAIADDLQDTVSQLGENLGITFQLLDDYLDFES 217


>gi|227833507|ref|YP_002835214.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184496|ref|ZP_06043917.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454523|gb|ACP33276.1| putative polyprenyl diphosphate synthase [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 363

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 36/262 (13%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSF 56
           M       L E    +   L   L +    + +     + +AI Y     L GGK+IR  
Sbjct: 1   MTTPQIPSLDEIPAAVREELALFLDRQRDAIASIGAP-VTNAISYLESFVLDGGKRIRPL 59

Query: 57  LVTEC---ASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-- 109
                   A       +    LR   ++E I   +LIHDD+  +D    RRG PTVH   
Sbjct: 60  YAWAGFIGARGLEGTESPQAMLRAATSLEFIQACALIHDDI--VDASDTRRGNPTVHRGV 117

Query: 110 --------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
                          + +  AI+ G+  L +A +++       +   R++          
Sbjct: 118 AARHRELGFHGDADFFGQSLAILVGDMALVWAEDMLQDSGLSPEALARARAPWRAMR--- 174

Query: 156 LQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLR 211
            + ++GGQMLDI  E        +   + + KT A  +      GA +A A +      R
Sbjct: 175 -REVIGGQMLDICLEAEGSEDATLADSVNRFKTAAYTIERPLHLGAAIAGAPEKLVAAFR 233

Query: 212 CFGENLGIIFQLADDLLDCEED 233
            +G+++G+ FQL DDLL    D
Sbjct: 234 GYGQDIGVAFQLRDDLLGVFGD 255


>gi|134101716|ref|YP_001107377.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291003113|ref|ZP_06561086.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133914339|emb|CAM04452.1| geranylgeranyl pyrophosphate synthase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 368

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 35/255 (13%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++  L + L E  +R D ++ D   ++     TQ        +R  L GGK+IR      
Sbjct: 21  VDAALGNFLDEQEERFDDLISDPQSRSQWRAATQS-------LRGFLAGGKRIRPAFCYW 73

Query: 61  CASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------- 111
                         +   AA+E +H ++L+HDD+  +D    RRG P++H Q+       
Sbjct: 74  GWRGAGGGADDEGVIGAAAALELLHSFALVHDDI--IDASDTRRGAPSLHRQHAELHRRS 131

Query: 112 ---------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                        A++ G+  L +  +++++     +    ++ +++ +    L  ++ G
Sbjct: 132 GGRGSSELFGTSIALLLGDLCLAWFHDMLATSGLPAERIREARPLVAHS----LTELVLG 187

Query: 163 QMLDIQDEFIDETQV---FMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLG 218
           Q LD+ ++      V   + +   KT    +      G ++A AS         +   LG
Sbjct: 188 QYLDVAEQACSRHSVSRSYTVIHYKTAKYTIERPLHLGGVLAGASPALLGSYTAYAMPLG 247

Query: 219 IIFQLADDLLDCEED 233
             FQL DD+L    D
Sbjct: 248 EAFQLRDDVLGAFGD 262


>gi|323717965|gb|EGB27153.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis CDC1551A]
          Length = 257

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 10/164 (6%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++  
Sbjct: 1   MSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTGL 58

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191
             +       + +      +    +  GQ  D   E   E        +   KT AL   
Sbjct: 59  TDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGC 113

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            C  GA++A+A       L  FG  LG+ FQ  DDL+    D  
Sbjct: 114 CCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPG 157


>gi|254394001|ref|ZP_05009090.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294810895|ref|ZP_06769538.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326439472|ref|ZP_08214206.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197707577|gb|EDY53389.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|294323494|gb|EFG05137.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 368

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 93/245 (37%), Gaps = 30/245 (12%)

Query: 13  SKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNV--N 68
              ++  LDD L   A   +       ++  +R + L GGK++R  L            +
Sbjct: 24  RTAVERTLDDFLDGKARDAERDDMPPEVIGTLRDFVLRGGKRLRPLLCACGWYAAGGTGD 83

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYD 112
               +RVGAA+E  H ++L+HDDL  MD    RRG+P VH                 +  
Sbjct: 84  PTAVVRVGAALELFHAFALVHDDL--MDRSATRRGRPAVHRALADRYRSTRDHATAERLG 141

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
             +AI+ G+    ++ E++ +     +       ++       +     GQ LD+     
Sbjct: 142 VGSAILLGDLACVWSCELLHTAPLTPRQFSALLPVVHAMRTEVMY----GQYLDLLATGE 197

Query: 173 DETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
               V     + + KT          +GA +A   +   +    +   LG  FQL DDLL
Sbjct: 198 PTADVRGPLRVARYKTATYTCERPLHAGAALAGGPEAVLDACTAYALPLGEAFQLRDDLL 257

Query: 229 DCEED 233
               D
Sbjct: 258 GVFGD 262


>gi|154174404|ref|YP_001408390.1| prenyl transferase [Campylobacter curvus 525.92]
 gi|112802622|gb|EAT99966.1| prenyl transferase [Campylobacter curvus 525.92]
          Length = 297

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 12/166 (7%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 LR+ A IE IH  SL+HDD+  +D+   RRGKP+++  +    +I+ G+   + 
Sbjct: 43  GTSDETLRLCAIIELIHLASLLHDDV--IDDADTRRGKPSINALFGTKNSIMLGDIFYSK 100

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
            F  ++     +        ++S   +    G L    L  ++   D+ +   +   KT 
Sbjct: 101 GFFELAKFSPNIA------RLVSEAVSKLSIGELMDVDL-SENFNDDKQKYMDMIYYKTA 153

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L+      GAI+A   +    + R +G+NLG+ FQ+ DD+LD  +
Sbjct: 154 VLIEATAACGAILAGLDET---KFRIYGKNLGLAFQIIDDVLDITQ 196


>gi|332670673|ref|YP_004453681.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
 gi|332339711|gb|AEE46294.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
          Length = 372

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 98/257 (38%), Gaps = 32/257 (12%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFN 66
           L++   ++D +L D + +    ++   +D   L+ A+   L GGK++R+           
Sbjct: 10  LEDVRTQVDAVLADHVERLRRELEPTGDDTLPLVDAVARMLSGGKRLRAAFCWWSWRAHG 69

Query: 67  V-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------ 109
                    T +RVGAA+E     +L HDD+  MD    RRG P+ H             
Sbjct: 70  GVPGTPEAGTVVRVGAALELFQAAALFHDDV--MDESDTRRGMPSAHRAFEAMHVERGLS 127

Query: 110 ----QYDEVTAIIAGNGLLTYAFEIISSPKTQLKD--NIRSQLMLSLTHNIGLQG----M 159
               Q+    AI+ G+  L  + +  +S           RS+ +  L       G    +
Sbjct: 128 GDVRQFGMSAAILLGDLALVASEQEFASALADAPTSRARRSRAVYDLMRTEVTVGQYLDV 187

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           L   +    D   DE++   + + K+    +      GA +A A        R  G  LG
Sbjct: 188 LAQSLPWGDDPDADESRARAVIRAKSARYSVEHPLTLGAALADADDESLAACRQVGLPLG 247

Query: 219 IIFQLADDLLDCEEDLP 235
             FQL DDLL    D  
Sbjct: 248 EAFQLRDDLLGVFGDPG 264


>gi|302867155|ref|YP_003835792.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302570014|gb|ADL46216.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 347

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 86/233 (36%), Gaps = 15/233 (6%)

Query: 15  RIDTILDDL----LLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNH 69
            ++ +L+      L      +       L      Y    GK +R+ L       F    
Sbjct: 11  HVERMLERYRGLALGALLDDVPDGGPRYLYDLVAEYPRRWGKGLRAALCLATCRAFGGGD 70

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L     +E  H   LIHDD+   D    RRG  T+H +Y    A+  GN     A  
Sbjct: 71  AVGLNAAVTVELFHNAFLIHDDIQ--DESEQRRGGRTLHAEYGVGVALNVGNMTNLLALR 128

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFIDETQVFMIQKMK 184
            +++ +  L   I     L     + ++  L GQ ++I         +D    + +   K
Sbjct: 129 RLAANRAALGSGI--AWRLFTETELMMRHSLEGQAIEIGWIRDNVCDLDADDYYRMCLKK 186

Query: 185 T-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T      + C +G ++A   +N  + L  +G  LG  FQ+ DD L+   D  +
Sbjct: 187 TSWYTCIYPCRTGILVATGRENAVDVLDRYGWYLGAAFQIQDDALNLTGDYAR 239


>gi|254574320|ref|XP_002494269.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115]
 gi|238034068|emb|CAY72090.1| Hexaprenyl pyrophosphate synthetase [Pichia pastoris GS115]
 gi|328353910|emb|CCA40307.1| hexaprenyl pyrophosphate synthetase,mitochondrial precursor [Pichia
           pastoris CBS 7435]
          Length = 489

 Score =  138 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 45/206 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D    RRG+P+ ++ +    AI+AG+ LL  A   +  
Sbjct: 192 RLAEVVEMIHTASLLHDDV--IDFSDSRRGRPSGNVAFTNKMAILAGDFLLGRASVELGR 249

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ------------------------------------ 157
            +      + S  + +L     +Q                                    
Sbjct: 250 LRNSEVVELMSTSIANLVEGEFMQLKNTVLQPDITMVEGNPTPIPEATGKVPTEISEYSV 309

Query: 158 --GMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCF 213
              ++ G+ +   +E ++    + + K  +KT AL+  +  S AI+A   +        F
Sbjct: 310 PGAIVDGKRIITHEENVNAAFDYYLHKTYLKTAALISKSSRSTAILAGCQEEVINNCYRF 369

Query: 214 GENLGIIFQLADDLLDCE---EDLPK 236
           G NLG+ FQ+ DD+LD     E L K
Sbjct: 370 GRNLGLCFQIVDDMLDYTTTAEQLGK 395


>gi|321473072|gb|EFX84040.1| hypothetical protein DAPPUDRAFT_223125 [Daphnia pulex]
          Length = 378

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 20/235 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +L+E+S  +   ++D+  +      T     L+   +Y   G GK IR  +    A   N
Sbjct: 53  ELREDS-LVRQDVEDV-YEGIREALTDTQPLLVPVAQYYFGGDGKAIRPVITLCWAKAVN 110

Query: 67  VN---------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
            +              RV   +E IH   L HDD+  +DN   RR +P+++  +    +I
Sbjct: 111 CHLGKQTFRRLIQDQKRVCQVLEMIHAAGLYHDDV--IDNAESRRSRPSINNVWGVKKSI 168

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           +AG+ +L  +  II+    +    + + ++  +     +Q   G    +    ++D+T  
Sbjct: 169 LAGDFVLGRSMRIIAEINNEDVSILLNTMIDHIVIGEIMQLSAGATEEERFAHYVDKT-- 226

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 KT +L+  +C++ +++A A  + +      G  LG+ FQL DD+LD   
Sbjct: 227 ----FKKTASLLAHSCQAVSVLAGADSDVQAMGFTLGRQLGMAFQLVDDILDFSA 277


>gi|320100357|ref|YP_004175949.1| polyprenyl synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319752709|gb|ADV64467.1| Polyprenyl synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 367

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 32/236 (13%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---SLFNVNHLTALRVGAAIE 80
           + + AS +     D +  A  Y L GGK++R+FL           + +      +   IE
Sbjct: 29  IREEASSISPLTLDAVEIASDYTLRGGKRLRAFLTLVGYWSKEWGSGDPSLITSLMTGIE 88

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAGNGLL 124
            +  Y L+HDD+  MD   IRRG PTVH                  Y +  AI  G+ L 
Sbjct: 89  LLQSYLLVHDDV--MDRDEIRRGGPTVHSWFRDKCIREFKTGDCTHYGDSQAITVGDFLE 146

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFM 179
             A E +S     +   + S+  L  T+  GL+ +  GQ LD+   +     + E  V +
Sbjct: 147 ATAVEYVSRAG--INGEVLSK--LLGTYAAGLRKVAYGQYLDVLFSYRSLHEVSERDVLL 202

Query: 180 IQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + ++KT    +      GAI +   ++     L  +    GI FQL DD++    D
Sbjct: 203 VHRLKTASYTIELPLHMGAIASGKYNERLLGELSSYAIPAGIAFQLRDDIIGLYGD 258


>gi|152992234|ref|YP_001357955.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1]
 gi|151424095|dbj|BAF71598.1| polyprenyl synthetase [Sulfurovum sp. NBC37-1]
          Length = 298

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 31/231 (13%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L    ++I+  + +L  +    +  +               GK++R+ L+ + A     N
Sbjct: 2   LNAVERKIEQFIVELDDKEVMGLYAKFPQ------------GKRLRAKLILKIA----GN 45

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            L+ ++  A +E IH  SL+HDD+  +D+ Y RR KP+++  Y   TAI+ G+ L +  F
Sbjct: 46  GLSVVKTAAVVEMIHAASLLHDDV--IDDAYTRRSKPSLNALYGNKTAIMLGDILYSKGF 103

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             +++  +++        ++S        G L    L       D+     +   KT +L
Sbjct: 104 FELNNISSEVA------KIVSNAVTQLSLGELKDVSLSKIF-NTDKEIYLDMIYQKTASL 156

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           +  +  + A++A      KE    +G NLG+ FQ+ DDLLD   D   L K
Sbjct: 157 IEASAGAAAVLAGKP---KEAYMTYGRNLGMAFQMIDDLLDITSDAVTLGK 204


>gi|315047266|ref|XP_003173008.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS
           118893]
 gi|311343394|gb|EFR02597.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma gypseum CBS
           118893]
          Length = 491

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   I+ 
Sbjct: 233 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIAR 290

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      +   +M +L    G    L   MLD  +    E           +K+ +L+ 
Sbjct: 291 LRDPEVIELLGTVMANLVE--GEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLIS 348

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++  +     E    FG NLG+ FQL DD+LD     E+L K
Sbjct: 349 KSCRAAALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGK 397


>gi|227500381|ref|ZP_03930443.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius
           ATCC 35098]
 gi|227217444|gb|EEI82763.1| possible trans-hexaprenyltranstransferase [Anaerococcus tetradius
           ATCC 35098]
          Length = 330

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 17/225 (7%)

Query: 17  DTILDDLLLQTASHMQT-----QHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH- 69
           + +++DL+++    ++      + +  L   I+ AL   GK IR+ L+  C SL      
Sbjct: 12  ENLIEDLVIEIHQEIKNILGDYKSSQNLYDIIKDALRSSGKMIRTKLLI-CISLMGEEEI 70

Query: 70  -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +   AA+E  H  SLIHDD+  +D+  +RR   +   +Y +  A+ AG+ ++   F
Sbjct: 71  SDKIISQCAAVEITHLASLIHDDI--IDDSTLRRSHKSTQAKYGKDVAVFAGDYMIAKVF 128

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             ++      + ++ +  +  + +         GQ L+     +   + F     KT + 
Sbjct: 129 SYLAKKGYVEEISVIADTIRDMCNGEV------GQNLNKYKINVSTDEYFENISGKTASF 182

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               C  G+      + + E++  FG+NLG++FQL DDLLD   +
Sbjct: 183 FKTVCYFGSKNCGFDRKDTEKMVRFGQNLGLMFQLKDDLLDLFSE 227


>gi|146321614|ref|YP_001201325.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
 gi|145692420|gb|ABP92925.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
          Length = 235

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 9/225 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-L 73
            I+  L+++     S M   H       + Y    GK +R+ L    A +       + L
Sbjct: 11  EIERGLEEVKSIILSEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              A +E +H  +LIHDD+  +D    RRG    H Q+    AI  G+ LL Y+  +   
Sbjct: 71  YFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLF-- 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMC 190
               L+    S+  L L ++  ++ +L G   Q+L+  D  +         + KT  L  
Sbjct: 127 -GKGLRLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFG 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            AC+ G+ +   S+ +       G+ LG+ FQL DDL+D + D+ 
Sbjct: 186 LACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVA 230


>gi|315506436|ref|YP_004085323.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315413055|gb|ADU11172.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 347

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 86/233 (36%), Gaps = 15/233 (6%)

Query: 15  RIDTILDDL----LLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNH 69
            ++ +L+      L      +       L      Y    GK +R+ L       F    
Sbjct: 11  HVERMLERYRGLALGALLDDVPDGGPRYLYDLVAEYPRRWGKGLRAALCLATCRAFGGGD 70

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              L     +E  H   LIHDD+   D    RRG  T+H +Y    A+  GN     A  
Sbjct: 71  AVGLNAAVTVELFHNAFLIHDDIQ--DESEQRRGGRTLHAEYGVGVALNVGNMTNLLALR 128

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-----EFIDETQVFMIQKMK 184
            +++ +  L   I     L     + ++  L GQ ++I         +D    + +   K
Sbjct: 129 RLAANRAALGSGI--AWRLFTETELMMRHSLEGQAIEIGWIRDNVCDLDADDYYRMCLKK 186

Query: 185 T-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           T      + C +G ++A   +N  + L  +G  LG  FQ+ DD L+   D  +
Sbjct: 187 TSWYTCIYPCRTGILVATGRENAVDVLDRYGWYLGAAFQIQDDALNLTGDYAR 239


>gi|241957890|ref|XP_002421664.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis
           CD36]
 gi|223645009|emb|CAX39602.1| hexaprenyl pyrophosphate synthetase, putative [Candida dubliniensis
           CD36]
          Length = 498

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 44/201 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ LL  A   I+ 
Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ----------------------------------GM 159
            +      + S  + +L     +Q                                    
Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316

Query: 160 LGGQMLDIQDEFIDE--------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
              Q  +  D  +D                 +KT +LM  +C + A+++ +  +  E   
Sbjct: 317 YSVQQKNGGDAVVDHNINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGSQDDIIENCY 376

Query: 212 CFGENLGIIFQLADDLLDCEE 232
            FG NLG+ FQ+ DD+LD   
Sbjct: 377 QFGRNLGLCFQIVDDMLDYTS 397


>gi|302024379|ref|ZP_07249590.1| polyprenyl synthetase [Streptococcus suis 05HAS68]
          Length = 235

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 9/225 (4%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-L 73
            I+  L+++     S M   H       + Y    GK +R+ L    A +       + L
Sbjct: 11  EIERGLEEVKSIILSEMMVLHPAVTSKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              A +E +H  +LIHDD+  +D    RRG    H Q+    AI  G+ LL Y+  +   
Sbjct: 71  YFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLF-- 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMC 190
               L+    S+  L L ++  ++ +L G   Q+L+  D  +         + KT  L  
Sbjct: 127 -GKGLRLLEVSRDDLDLGNDKLMETILRGELSQLLNQFDANMTMKAYLKQIQGKTAFLFG 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            AC+ G+ +   S+ +       G+ LG+ FQL DDL+D + D+ 
Sbjct: 186 LACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVA 230


>gi|23308904|ref|NP_601376.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|21324942|dbj|BAB99565.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 371

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 32/215 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR             +        + L   A++E I   +LIHDD+  +D+ 
Sbjct: 55  FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 112

Query: 99  YIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH                  +    +I+AG+  L +A +++       +   
Sbjct: 113 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQDSGLSAEALA 172

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAI 198
           R++             ++GGQ+LDI  E      V +   + + KT A  +      GA 
Sbjct: 173 RTRDAWRGMRT----EVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLHLGAS 228

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +A  S    + L  +G ++GI FQL DDLL    D
Sbjct: 229 IAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGD 263


>gi|261209912|ref|ZP_05924212.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC341]
 gi|260840977|gb|EEX67509.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio sp.
           RC341]
          Length = 243

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 8/146 (5%)

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK T +  +    +++ G+ + T +F++++   +     ++   +
Sbjct: 2   LHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKL 54

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  AS   +
Sbjct: 55  MSDAVNVIAEGEV-QQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVE 113

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
             ++ +G+ LG  FQL DD++D   D
Sbjct: 114 LAMQNYGKYLGTAFQLIDDVMDYTSD 139


>gi|302504938|ref|XP_003014690.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371]
 gi|302660502|ref|XP_003021930.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517]
 gi|327306145|ref|XP_003237764.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS
           118892]
 gi|291177996|gb|EFE33787.1| hypothetical protein ARB_07252 [Arthroderma benhamiae CBS 112371]
 gi|291185850|gb|EFE41312.1| hypothetical protein TRV_03960 [Trichophyton verrucosum HKI 0517]
 gi|326460762|gb|EGD86215.1| hexaprenyl pyrophosphate synthetase [Trichophyton rubrum CBS
           118892]
          Length = 427

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   I+ 
Sbjct: 169 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIAR 226

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      +   +M +L    G    L   MLD  +    E           +K+ +L+ 
Sbjct: 227 LRDPEVIELLGTVMANLVE--GEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLIS 284

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++  +  +  E    FG NLG+ FQL DD+LD     E+L K
Sbjct: 285 KSCRAAALLNQSGPDVAEAAYLFGRNLGLAFQLVDDMLDYTISGEELGK 333


>gi|296804410|ref|XP_002843057.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS
           113480]
 gi|238845659|gb|EEQ35321.1| decaprenyl-diphosphate synthase subunit 1 [Arthroderma otae CBS
           113480]
          Length = 488

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   I+ 
Sbjct: 230 RLAEITELIHTASLLHDDV--IDNAVTRRSNLSANLAFGNKMAVLAGDFLLGRASVFIAR 287

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMC 190
            +      +   +M +L    G    L   MLD  +    E           +K+ +L+ 
Sbjct: 288 LRDPEVIELLGTVMANLVE--GEFMQLKNTMLDESNPVWSEDIISYYLQKTYLKSASLIS 345

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
            +C + A++  +     E    FG NLG+ FQL DD+LD     E+L K
Sbjct: 346 KSCRAAALLNQSGPEVAEAAYLFGRNLGLAFQLVDDMLDYTVSGEELGK 394


>gi|148273051|ref|YP_001222612.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147830981|emb|CAN01926.1| putative geranylgeranyl pyrophosphate synthase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 373

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 92/262 (35%), Gaps = 43/262 (16%)

Query: 15  RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTE------------ 60
            + T LDD L   A+ ++    D   +       L GGK+ R+                 
Sbjct: 10  HVQTRLDDFLAAQAAGLREISPDLVPIQEFSSDLLRGGKRFRAQFCYWGWRSVIDLEPSP 69

Query: 61  CASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------ 111
                          + V A +E  H  +L+HDD+  +D    RRG+P  H ++      
Sbjct: 70  AGRPQGEERPGYRAVVGVAAGLEIFHAAALVHDDI--IDRSDTRRGRPAAHRRFEALHAA 127

Query: 112 ----------DEVTAIIAGNGLLTYAFEIISSPKTQLKD---NIRSQLMLSLTHNIGLQG 158
                      E  A + G+ LL ++ E++      L D      ++  L++       G
Sbjct: 128 SGWGGSSASFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELAMMRTQVTLG 187

Query: 159 MLGGQMLDIQDEFIDETQVFM----IQKMKTGAL-MCFACESGAIMAHASQNEKERLRCF 213
                + ++    + E         +   K+    +      GA +A A+  +   LR  
Sbjct: 188 QYLDVLEEVAWPTVPEEDTLARAHNVIVYKSAKYSIEAPLVVGANLAGATPEQVTALRAV 247

Query: 214 GENLGIIFQLADDLLDCEEDLP 235
           G  LGI FQL DD+L    D  
Sbjct: 248 GLPLGIAFQLRDDVLGVFGDSA 269


>gi|62391012|ref|YP_226414.1| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326351|emb|CAF20513.1| PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE [Corynebacterium
           glutamicum ATCC 13032]
          Length = 366

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 32/215 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR             +        + L   A++E I   +LIHDD+  +D+ 
Sbjct: 50  FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 107

Query: 99  YIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH                  +    +I+AG+  L +A +++       +   
Sbjct: 108 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQDSGLSAEALA 167

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAI 198
           R++             ++GGQ+LDI  E      V +   + + KT A  +      GA 
Sbjct: 168 RTRDAWRGMRT----EVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLHLGAS 223

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +A  S    + L  +G ++GI FQL DDLL    D
Sbjct: 224 IAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGD 258


>gi|271964292|ref|YP_003338488.1| farnesyltranstransferase [Streptosporangium roseum DSM 43021]
 gi|270507467|gb|ACZ85745.1| putative farnesyltranstransferase [Streptosporangium roseum DSM
           43021]
          Length = 355

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 86/248 (34%), Gaps = 23/248 (9%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-L 64
            + L      +D  L + + +    +       L+SA    L GGK++R           
Sbjct: 5   AAALDTIRFEVDRSLKEFVERQLPQVSAPEVAPLISAAEEFLAGGKRLRPAFCYWGWRGA 64

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-------------- 110
              +        A++E +   +L+HDD+  MD   +RRG P  H +              
Sbjct: 65  GGGDDPALFTAAASLELLQASALVHDDV--MDASDLRRGMPAAHRRFQTLHEKAGWHGSA 122

Query: 111 --YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + E  AI+ GN +L ++ E+             +Q +        + G     +    
Sbjct: 123 EQFGEGAAILLGNLMLIWSGEMWRGSGLPPASLAAAQQVHDHMRTELMCGQYLDLLEQAH 182

Query: 169 DEFIDETQVFMIQKMKTGAL-MCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLAD 225
            E         +   K+G   +      G ++A    +         +G ++GI FQL D
Sbjct: 183 GEN-TFDSALRVALFKSGKYSVEQPLRLGLVLAARGRAPWIDRLCEEYGRSVGIAFQLRD 241

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 242 DILGVFGD 249


>gi|256082061|ref|XP_002577281.1| prenyl transferase; trans-prenyltransferase [Schistosoma mansoni]
 gi|238662587|emb|CAZ33518.1| prenyl transferase [Schistosoma mansoni]
          Length = 409

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 38/256 (14%)

Query: 11  ENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           ++ + +   L DL  ++    H            +RY     GK +R  LVT  A+  N 
Sbjct: 63  DSKELLQNALKDLHLIVSEIKHSLCPAFPVFRDLLRYQFESQGKLVRPLLVTLAAACANS 122

Query: 68  NHL--------------------------TALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           +                                +    E IH  SLIHDDL  +D+  +R
Sbjct: 123 HIECNSPLIVRYESPETDDVRNLAYLVSPKQHEIAKIAEMIHTASLIHDDL--IDSAAVR 180

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGK + +  +    A++ G+ +LT++  +++         + SQ++  L H   +Q    
Sbjct: 181 RGKTSAYKAFGHREAVLGGDFILTHSSRLLAQIGDTGVIAVLSQVIEDLIHGEMMQLAPN 240

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGI 219
               D + +             KT +L+  +C++ A++     SQ   + +  FGE+LG+
Sbjct: 241 SDDDDKRFQ-----TYLTKTYRKTASLIANSCKAVAMLTVPTLSQWHIDNMYEFGEHLGM 295

Query: 220 IFQLADDLLDCEEDLP 235
            FQL DD+LD   D  
Sbjct: 296 AFQLIDDVLDFVTDEA 311


>gi|145296134|ref|YP_001138955.1| hypothetical protein cgR_2054 [Corynebacterium glutamicum R]
 gi|140846054|dbj|BAF55053.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 366

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 32/215 (14%)

Query: 45  YALLGGKKIRSFLVTE---CASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR          A     +       L   A++E I   +LIHDD+  +D+ 
Sbjct: 50  FVLNGGKRIRPLYAWAGFLAAQGLKNSSERLESVLDAAASLEFIQACALIHDDI--IDSS 107

Query: 99  YIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH                  +    +I+AG+  L +A +++       +   
Sbjct: 108 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDMALVWAEDMLQDSGLSAEALA 167

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAI 198
           R++             ++GGQ+LDI  E      V +   + + KT A  +      GA 
Sbjct: 168 RTRDAWRGMRT----EVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLHLGAS 223

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +A  S    + L  +G ++GI FQL DDLL    D
Sbjct: 224 IAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGD 258


>gi|240169241|ref|ZP_04747900.1| polyprenyl diphosphate synthetase, GrcC1 [Mycobacterium kansasii
           ATCC 12478]
          Length = 335

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 23/228 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + ++    RI+ ++D  L      M       + S +     GGK+ R       
Sbjct: 15  DARFATGVRAGVARIEQLMDTELRSADVVM-------IDSLLHLFKAGGKRFRPLFTVLS 67

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A +  +      +  GA +E IH  +L HDD+  MD   +RRG P+ + ++    AI+AG
Sbjct: 68  AQVGPDPEAEEVIIAGAVVELIHLATLYHDDV--MDEAEVRRGAPSANARWGNNVAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDE-TQV 177
           + LL  A  ++S           +  +++ T       ++ GQM + +   E  D   Q 
Sbjct: 126 DYLLATASRLVSRLGP------AAVRIVADTFAA----LVTGQMRETRGAPEGADLIEQY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +   KTG+L+  A   GA+ + A  ++ ERL   G  +G  FQ+AD
Sbjct: 176 LTVVHEKTGSLIGAAGRFGAMFSGADGDQVERLSRLGGIVGTAFQIAD 223


>gi|307720825|ref|YP_003891965.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978918|gb|ADN08953.1| Polyprenyl synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 295

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +R++  +  L+ +           RL +     L GGK++R+ L+ + A      H  A 
Sbjct: 2   QRVEAQIKRLIDECDY----DEVTRLFA----TLQGGKRLRAKLILKIA----PEHKDAP 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            + A +E IH  SL+HDD+  +D+   RRG+ +V+      TA++ G+ L + AF  + +
Sbjct: 50  LLAAIVELIHAASLLHDDV--IDDAMTRRGEASVNATDGSKTAVMLGDILYSKAFTELVA 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                 D   +Q + S    +    M+  +M    +   DE +   +  +KT  L+  A 
Sbjct: 108 -----FDKKVAQTIASSVTALSKGEMMDVEMAQNFN--ADEERYLDMLYLKTATLIEAAA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           ++ A++A    ++      +G NLG+ FQ+ DD+LD   D  
Sbjct: 161 KASALLAGKDADKHAL---YGRNLGLSFQIIDDILDITADEA 199


>gi|110638671|ref|YP_678880.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406]
 gi|110281352|gb|ABG59538.1| octaprenyl-diphosphate synthase [Cytophaga hutchinsonii ATCC 33406]
          Length = 326

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 10/225 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           +L +    +   + D   +    M+++    L   + Y +   GK++R   V   A L  
Sbjct: 5   RLDDIRNVVKDDMKDFEKKFRDSMKSKVM-LLDKIMSYIVKRNGKQMRPMFVFLSAHLAG 63

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             + +  R  A IE +H  +L+H     +D+   RRG  +++  +    A++ G+ LL+ 
Sbjct: 64  NVNDSTQRGAALIELLHTATLVH--DDVVDDSDYRRGMFSINALWKNKIAVLVGDYLLSK 121

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +  +        I S  +  ++    L      Q+   ++  I+E   F I + KT 
Sbjct: 122 GLLLSINHGDFHLLKIVSNAVREMSEGELL------QIEKARNLNINEEIYFEIIRQKTA 175

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +L+   C  G     A +   ER + FGE +G+ FQ+ DDL D E
Sbjct: 176 SLIASCCAVGVSSTGADEALVERAKMFGEKIGMAFQVKDDLFDYE 220


>gi|330718944|ref|ZP_08313544.1| geranyl pyrophosphate synthase [Leuconostoc fallax KCTC 3537]
          Length = 255

 Score =  137 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 13/213 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-LTALRVGAAIECI 82
           +LQ  S   T     + +AI+  L  GK +R  L    + L +  +   A+ +GA++E +
Sbjct: 1   MLQQVSSSWTIGFKDIDTAIKSQLNAGKLVRPALTLLFSELTDEAYNENAITLGASVELL 60

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  +LIHDD+  +D   +RRG+ ++  ++ + TA+ +G+ LLT  F +++       +NI
Sbjct: 61  HLATLIHDDI--IDESKLRRGQTSIQTRFGKDTAVYSGDYLLTGMFTLLNK-----VNNI 113

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
                 + +    L G L  Q  +     +   +  +  K KT AL   +   G IM+  
Sbjct: 114 EVNQYANESLKEILFGELS-QKQNRYRLDMTFDEYLLQIKGKTAALFRMSTLFG-IMSRP 171

Query: 203 SQNE---KERLRCFGENLGIIFQLADDLLDCEE 232
           +      ++ ++  GE +G+ FQL DD LD  E
Sbjct: 172 NDEINNFRDLMQKIGETMGMTFQLLDDYLDFSE 204


>gi|294654995|ref|XP_457083.2| DEHA2B02640p [Debaryomyces hansenii CBS767]
 gi|199429612|emb|CAG85071.2| DEHA2B02640p [Debaryomyces hansenii]
          Length = 483

 Score =  137 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 76/207 (36%), Gaps = 40/207 (19%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N       R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ L
Sbjct: 178 ALNGILPKQRRLAEIVEMIHTASLLHDDV--IDLSDTRRGRPSGNIAFSNKMAVLAGDFL 235

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ-------------------------- 157
           L  A   I+  +      + S  + +L     +Q                          
Sbjct: 236 LGRASVAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVMSNEGPDSITNDGDIKNIPKA 295

Query: 158 ------------GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
                           G++    +             +KT +LM  +  +  +++ +  N
Sbjct: 296 TGKVPTVEHEYSVTAPGEVDHNTNVSAAFEYYLHKTYLKTASLMSKSSRAAGVLSGSQDN 355

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
             E    FG NLG+ FQ+ DD+LD   
Sbjct: 356 IIENCYDFGRNLGLCFQIVDDMLDYTS 382


>gi|154286806|ref|XP_001544198.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1]
 gi|150407839|gb|EDN03380.1| hypothetical protein HCAG_01245 [Ajellomyces capsulatus NAm1]
          Length = 269

 Score =  137 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 10/169 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +DN   RR   + ++ +    A++AG+ LL  A   ++ 
Sbjct: 83  RLAEITELIHTASLLHDDV--IDNAVTRRSTVSANLAFGNKMAVLAGDFLLGRASVALAR 140

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
            +      + S ++ +L    G    L     D  +    E   T       +K+ +L+ 
Sbjct: 141 LRDPEVIELLSTVIANLIE--GEFMQLKNTERDELNPSFTEQTITYYLQKTYLKSASLIS 198

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--ED-LPK 236
            +C + A++ H+S    E    +G NLG+ FQL DD+LD     D L K
Sbjct: 199 KSCRAAALLGHSSPEIVEAAYSYGRNLGLAFQLVDDMLDYTIHGDELGK 247


>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 222

 Score =  137 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 9/162 (5%)

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SLIHDDLP MDN  +RRGKPT H  Y E  A++AG+ LL  AFE ++   + L    R
Sbjct: 1   TSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPER 60

Query: 144 -SQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGA 197
             + ++ L   IG  G++ GQM+D+  E ++        +  I   KT AL+  A   G 
Sbjct: 61  MIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGV 120

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           IM   ++ E E+LR +   +G++FQ+ DD+LD     E+L K
Sbjct: 121 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGK 162


>gi|328954813|ref|YP_004372146.1| geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase
           [Coriobacterium glomerans PW2]
 gi|328455137|gb|AEB06331.1| geranylgeranyl-diphosphate synthase ;farnesyl-diphosphate synthase
           [Coriobacterium glomerans PW2]
          Length = 363

 Score =  137 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 8/235 (3%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVT 59
           ++      L    + ++  + D             +  L + + R++  GGK+ R  +  
Sbjct: 28  VSTSFADFLAAEHQDLERRIADFFCDRTDRADI--DAYLYAPLARFSRNGGKRHRPLICM 85

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A     +   AL V  AIE     +LIHDD+   D G  RRG P +H+   E  AI  
Sbjct: 86  LAARAVGGDAAAALDVATAIEHFQSAALIHDDIA--DRGNTRRGAPCLHVTEGEGIAINC 143

Query: 120 GNG-LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQV 177
           G+  L++    ++       +  IR    L       ++G            + +     
Sbjct: 144 GDLELISMTAAVLDDANLGDELKIRLLRELVEMTRRTIEGQALDLGWARDARYDLTVEDY 203

Query: 178 FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +   KT           GAI     + + E LR FG   G+ FQ+ DDL++ +
Sbjct: 204 LDMATRKTAWYSGAVPLACGAIAGGGCEVQVEGLRSFGLACGLAFQIQDDLINLQ 258


>gi|290790227|pdb|3LK5|A Chain A, Crystal Structure Of Putative Geranylgeranyl Pyrophosphate
           Synthase From Corynebacterium Glutamicum
 gi|325054159|pdb|3QQV|A Chain A, Crystal Structure Of Geranylgeranyl Pyrophosphate Synthase
           From Corynebacterium Glutamicum Complexed With Isoprenyl
           Diphosphate And Magnesium
          Length = 380

 Score =  137 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 32/215 (14%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           + L GGK+IR             +        + L   A++E I   +LIHDD+  +D+ 
Sbjct: 57  FVLNGGKRIRPLYAWAGFLAAQGHKNSSEKLESVLDAAASLEFIQACALIHDDI--IDSS 114

Query: 99  YIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             RRG PTVH                  +    +I+AG+  L +A + +       +   
Sbjct: 115 DTRRGAPTVHRAVEADHRANNFEGDPEHFGVSVSILAGDXALVWAEDXLQDSGLSAEALA 174

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAI 198
           R++             ++GGQ+LDI  E      V +   + + KT A  +      GA 
Sbjct: 175 RTRDAWRGXRT----EVIGGQLLDIYLESHANESVELADSVNRFKTAAYTIARPLHLGAS 230

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +A  S    + L  +G ++GI FQL DDLL    D
Sbjct: 231 IAGGSPQLIDALLHYGHDIGIAFQLRDDLLGVFGD 265


>gi|62959183|gb|AAY23699.1| farnesyl diphosphate synthase [Exiguobacterium sp. JL-24]
          Length = 144

 Score =  137 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/134 (38%), Positives = 82/134 (61%), Gaps = 3/134 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PT H  + E  AI+AG+GLLT++F++++  +  L D  + +L+  L    G +GM
Sbjct: 12  LRRGNPTNHKVFGEAMAILAGDGLLTFSFQLLAEDE-HLPDEKKVELIALLARCAGPEGM 70

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ+ DI+ E   +   ++  I   KTG L+ F+  +GAIM+ AS  E   L  F  ++
Sbjct: 71  VGGQVADIEGENGELTVEELQSIHVRKTGKLLMFSVMAGAIMSDASPGELASLEEFAYHV 130

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ DD+LD E
Sbjct: 131 GLAFQIQDDILDVE 144


>gi|301310937|ref|ZP_07216866.1| putative polyprenyl synthetase [Bacteroides sp. 20_3]
 gi|300831000|gb|EFK61641.1| putative polyprenyl synthetase [Bacteroides sp. 20_3]
          Length = 518

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 10/189 (5%)

Query: 50  GKKIRSFLVTECASLFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           GK+ R +L+                  R   A+EC H  SL+HDD+   DN   R GKPT
Sbjct: 250 GKRWRPYLLAATYLALTGGAEVPDDVQRAAIAVECFHKASLVHDDIQ--DNDKERYGKPT 307

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           ++  Y    AI  G+ LL   + ++S    +    + +   ++L    G++         
Sbjct: 308 INALYGVPIAINVGDILLGEGYRLLSLCDARALTAVAADAHIALCKGQGMELE-----WS 362

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +    +    V  I   KT      +   G I A   +  +     +   LGI +QL DD
Sbjct: 363 VSPRPLTLDWVLEIFCNKTVPAFEVSLVLGLICAGDDEVLRRIFHQYSRALGIAYQLLDD 422

Query: 227 LLDCEEDLP 235
           + D ++D P
Sbjct: 423 IEDFKDDRP 431


>gi|296140358|ref|YP_003647601.1| polyprenyl synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296028492|gb|ADG79262.1| Polyprenyl synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 362

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 101/256 (39%), Gaps = 34/256 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTECA 62
            + L + +  +   L+D L +    ++       +      R+ L GGK+IR        
Sbjct: 9   ETTLADIAAAVQPQLEDFLDERRDLVEPVGPVFAETTAGLERFVLRGGKRIRPAFAWTGW 68

Query: 63  SLFNVNHL-----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------- 109
                         ALR  +A+E +   +LIHDD+  +D    RRG PT H         
Sbjct: 69  LAGGGATDGDVARAALRACSALEFVQACALIHDDI--IDASQTRRGYPTTHREFAELHAQ 126

Query: 110 --------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                   ++ E TAI+ G+  L +A ++        +  +R+    +         +LG
Sbjct: 127 RGWSGSSEKFGEATAILLGDLALAWADDMFLGAGLSPERYLRA----ARAWAAMRTEVLG 182

Query: 162 GQMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ+LDI  E      +     + + KT    +      GA +A AS      LR  G +L
Sbjct: 183 GQLLDIVSEASRDESQAAAERVVRFKTAGYTVERPLHVGAALAGASDQAITALRAIGVDL 242

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQL DDLL    D
Sbjct: 243 GVAFQLRDDLLGAFGD 258


>gi|146082077|ref|XP_001464441.1| farnesyl synthetase [Leishmania infantum JPCM5]
 gi|134068533|emb|CAM66828.1| putative solanesyl-diphosphate synthase [Leishmania infantum JPCM5]
 gi|322497846|emb|CBZ32922.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 359

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 35/224 (15%)

Query: 35  HNDRLLSAIRYALL-GGKKIRSFLVTECASLF---------------------NVNHLTA 72
           +N+ L  A +Y L  GGK +R  LV   A                            L  
Sbjct: 50  NNEVLDHAGKYVLAAGGKLMRPALVVLMAHAMLPLDVSARLLEEPIGSLDEVTPGTILPF 109

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+    E IH  SL+HDD+  +D+   RRG+P +H  YD   A++AG+ +L  A   I+
Sbjct: 110 LRLAEVTELIHTASLVHDDV--IDSTGTRRGRPALHKVYDAKRAVLAGDYMLARASFYIA 167

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           + +       R  ++++        G L            D  +       KT +L+  +
Sbjct: 168 TLQVP-----RIVILMTTALEELTAGELIQMDGCF-----DIPRYEQKSFCKTASLIANS 217

Query: 193 CESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLP 235
             S A++A       E+    FG++LGI FQ+ DD LD   D  
Sbjct: 218 LASTAVLADPGNEALEQTAFDFGKHLGIAFQILDDCLDITGDEK 261


>gi|255513478|gb|EET89744.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 340

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 16/239 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNH 69
           E S+ +    + +  +   ++  Q  +     +R Y    G   R  L+     +F    
Sbjct: 2   EFSEYVAKRRNAIYSKITDYIPLQEPEEHYKIVREYIDRQGNYRRPILLMLTGEMFGAPI 61

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              +++ AA +    + LI DD  +MD+   RRG PT+H  Y  + AI A + +    ++
Sbjct: 62  EKLVQLAAAQQLSEEWLLIQDD--AMDDSEFRRGGPTLHKMYGWIHAINASDTINVTMWK 119

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-------IDETQVFMIQK 182
           I+     +     ++   +       ++  + GQ ++ +            E+  F I  
Sbjct: 120 ILKDYIMKFDP--KNGNAIYDKFYDMIKYTIEGQYIENKFINNTKDLSKASESMYFRIAD 177

Query: 183 MKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
            KT    +    + GA+ A A +      +  G N GI FQ+ DD+LD   D     KK
Sbjct: 178 GKTCYYTIYGPMQIGAMAAGAPEKAISAFKEIGTNTGIAFQIMDDILDMAGDEKTFGKK 236


>gi|67003501|dbj|BAD99412.1| GGPP synthase [Brevundimonas sp. SD212]
          Length = 298

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 4/184 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK++R  +    A+        AL  G A+E  H  SL+ DDLP MD+  +RRG+PT+H
Sbjct: 52  PGKRVRPVVAMLAAAHVGGRAEDALDFGCAVEMAHAASLVLDDLPCMDDAALRRGQPTLH 111

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            ++ E  A++A   LL  +  +I   +       R   +  LT  IG  G+  GQM D++
Sbjct: 112 RRHGEDAAVLAAVALLNQSTRLILQSRA--PSEARLGALDDLTQAIGFDGLAEGQMRDLR 169

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D+ +  D   +  I  +KTGAL   A   G  M     ++  RL  FGE +G  FQL DD
Sbjct: 170 DDPVQRDVVALRRINDLKTGALFVAAARGGGRMGGGDADDLARLAAFGEAVGFAFQLCDD 229

Query: 227 LLDC 230
           L+D 
Sbjct: 230 LMDA 233


>gi|54023707|ref|YP_117949.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
 gi|54015215|dbj|BAD56585.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica
           IFM 10152]
          Length = 383

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/252 (23%), Positives = 95/252 (37%), Gaps = 34/252 (13%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIR-YALLGGKKIRSFLVTECASLFN 66
            E    +  +L D        ++      +    A+  + L GGK+ R            
Sbjct: 30  AEFVASVQAVLSDFFTSRRPAVRALGPVFEEAADALEAFVLRGGKRTRPAFAWTGWLGAG 89

Query: 67  VNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH------------- 108
            +         L   AA+E +   +L+HDD+  +D+   RR  PTVH             
Sbjct: 90  GSPTAPEADAVLTACAALELVQACALVHDDI--IDSSRTRRRFPTVHVDFEQRHRERGWT 147

Query: 109 ---IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                +    AI+ G+  L +A +++ +         R   + +L        +LGGQ+L
Sbjct: 148 GDPAHFGVSVAILIGDLALAWADDMVHASGLDAAAIGRFAPVWALMRT----EVLGGQLL 203

Query: 166 DIQDEFIDETQVF---MIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           DI  E   +  V     I + KT A  +      GA +A A        R FG ++G+ F
Sbjct: 204 DINGEAGRDDSVEAALRINRYKTAAYTVERPLHLGAAIADADAELVAAYRTFGTDIGVAF 263

Query: 222 QLADDLLDCEED 233
           QL DDLL    D
Sbjct: 264 QLRDDLLGVFGD 275


>gi|159041083|ref|YP_001540335.1| polyprenyl synthetase [Caldivirga maquilingensis IC-167]
 gi|157919918|gb|ABW01345.1| Polyprenyl synthetase [Caldivirga maquilingensis IC-167]
          Length = 299

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 13/231 (5%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQH-NDRLLS-AIRYALLGGKKIRSFLVTECASLFNVN 68
           E  K I+ +L  ++ +  + +   +    L   A+ Y    GK IR  L          N
Sbjct: 6   ELPKEINDVLSLIINELGNLLNGVNMPPNLRESAMHYIHNKGKMIRPLLTLITTHTLGGN 65

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            + A+    A+E +H  +L+ DD+  +D   +RRG  T   +Y     I+A + L+  A 
Sbjct: 66  LMDAVNPAIAVELVHVATLLQDDI--IDGHLMRRGSETPFKRYGTEYTILASDLLIAKAI 123

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           E        LK   R   M   +  + L      ++    +  +D      I + KT +L
Sbjct: 124 EY------SLKSKTRRITMELTSAALRLAIGQSYELEYKLNGKVDMNIYMRIIENKTASL 177

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           +  A   G  +A A  N    LR  GE LG  +Q+ DD++D    ++D PK
Sbjct: 178 ISAAIVLGGYVADADSNTINLLRSLGEKLGAAYQIRDDIIDYLNLDKDNPK 228


>gi|57833856|ref|NP_822197.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
 gi|57546763|dbj|BAC68732.2| polyprenyl diphosphate synthase [Streptomyces avermitilis MA-4680]
          Length = 413

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 29/243 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA- 72
           + +D  L + + + A+      +D      R+ L GGK+ RS  V             A 
Sbjct: 37  RLLDRFLAERVARAAALDPVFAHDIAERVARFTLDGGKRTRSQFVWWAHRACGGPAAGAE 96

Query: 73  --LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEV 114
             LRVGAA+E I   +L+HDD+  MD   +RRG+P +H                 ++ E 
Sbjct: 97  AALRVGAALELIQTCALVHDDV--MDGSRLRRGRPALHTDVSAQYADAVLPAPGTRFGEA 154

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID- 173
            AI+AG+  L +A ++++          R + + S         M+ GQ LDIQ +    
Sbjct: 155 AAILAGDLALAWADDVVADTDLAPDPGRRVREVWSCLR----MEMVAGQYLDIQGQATSS 210

Query: 174 --ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             E +      +K+    +    E GA +A A     + L   G  +G+ FQL DDL D 
Sbjct: 211 HSEARAMRAACLKSALYSVQRPLELGAALAGADTATTQALCSAGRCVGLAFQLRDDLHDV 270

Query: 231 EED 233
            E+
Sbjct: 271 FEE 273


>gi|67008259|emb|CAJ00343.1| putative geranylgerannylpyrophosphate synthase [Andrographis
           paniculata]
          Length = 140

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PT H  + E TA++AG+ LL+ AF  ++     ++     + +  L   IG +G+
Sbjct: 1   LRRGRPTNHKVFGEDTAVLAGDALLSLAFNHVAEKTKNVEHCRVVRAIAELALAIGSEGL 60

Query: 160 LGGQ--MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           + GQ   LD + E I   ++  I   KT  L+  A   G I+      E E LR +   +
Sbjct: 61  VAGQIVDLDSEGEKISLNELEYIHVHKTSMLLEAAAVCGGILGGGESTEVESLRKYARCI 120

Query: 218 GIIFQLADDLLDCE 231
           G++FQ+ DD+LD  
Sbjct: 121 GLLFQVVDDILDVT 134


>gi|255027667|ref|ZP_05299653.1| hypothetical protein LmonocytFSL_17247 [Listeria monocytogenes FSL
           J2-003]
          Length = 129

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 3/125 (2%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL 70
             ++   ++D+ L +  +    +   RL  ++ Y++  GGK+IR  LV        VN L
Sbjct: 7   FLEQYKKVIDESLFKEINERNIE--PRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPL 64

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
             ++   A+E IH YSLIHDDLP+MDN   RRGK T H  + + TAI+AG+ LLT AF I
Sbjct: 65  LGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSI 124

Query: 131 ISSPK 135
           ++   
Sbjct: 125 LAEDD 129


>gi|217978204|ref|YP_002362351.1| Polyprenyl synthetase [Methylocella silvestris BL2]
 gi|217503580|gb|ACK50989.1| Polyprenyl synthetase [Methylocella silvestris BL2]
          Length = 289

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 11/200 (5%)

Query: 36  NDRLLSAIRYALL-GGKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLP 93
             RL +AIRYA+  GG +IR  L    ++     N   +     AIE +HC SL HDDLP
Sbjct: 24  PPRLAAAIRYAIFPGGARIRPRLCLAVSAACGAQNLGASAAAAGAIELLHCASLAHDDLP 83

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+   RRGKP+VH  + E  A++AG+ ++  AFE I+      + ++   L+ ++   
Sbjct: 84  CFDDAPTRRGKPSVHAAFGEALAVLAGDAMIVMAFEAIARAFMD-RPHLLPPLVQTIARA 142

Query: 154 IGLQ-GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            G+  G+  GQ  + + +          Q+ KTG+L   A  +    A A+  +    R 
Sbjct: 143 AGMPSGIAAGQGYESEPQLARS----QYQRAKTGSLFVAATVA---GALAAGADGAPWRM 195

Query: 213 FGENLGIIFQLADDLLDCEE 232
            GE LG  +Q+ADD+ D   
Sbjct: 196 LGEGLGEAYQIADDIRDVAS 215


>gi|50309433|ref|XP_454724.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643859|emb|CAG99811.1| KLLA0E17183p [Kluyveromyces lactis]
          Length = 477

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 45/206 (21%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +I +    A++AG+ +L  A   IS 
Sbjct: 179 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNIAFTNKMAVLAGDFMLGRATVAISR 236

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------------------------- 167
            +      + S  + +L     +Q        D                           
Sbjct: 237 LRNPEVVELVSNSIANLVEGEFMQLKNTAIDADHTTFNNGTQHIPPPPTKFELTEHEYRV 296

Query: 168 ------------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCF 213
                        D+ +D    + + K  +KT AL+  +C + A+++       E    F
Sbjct: 297 PTSSTTNGTQLSHDQLVDMAFDYYLHKTYLKTAALISKSCRAAAVLSGVRDPIIEECYEF 356

Query: 214 GENLGIIFQLADDLLDCE---EDLPK 236
           G+NLGI FQL DD+LD     +DL K
Sbjct: 357 GKNLGICFQLVDDMLDFTISAKDLGK 382


>gi|261884869|ref|ZP_06008908.1| polyprenyl synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 243

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 24/222 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +RID IL + +      + ++   ++ S        GKK+RS L+ + A         + 
Sbjct: 2   ERIDDILKEFVDSLNYPLASEMFSQVSS--------GKKLRSKLILKIA----GASEASF 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           ++ + +E IH  S++HDD+  +D+  IRRGKP+++  +    +I+ G+ L +  F  I  
Sbjct: 50  KLSSVVEIIHLASVLHDDV--IDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGFNEI-- 105

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
               +K +++   ++S        G L    L       D+ +   +   KT  L+  A 
Sbjct: 106 ----VKFDMKIADIISDAVCKLSIGELMDVEL-GSSFNADKEKYLKMIYFKTAVLIEAAA 160

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +S AI+A   +   ++   +G+NLG+ FQ+ DD+LD   D  
Sbjct: 161 KSAAILAGFDE---QKYGDYGKNLGLAFQIVDDILDITSDEK 199


>gi|300711739|ref|YP_003737553.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
 gi|299125422|gb|ADJ15761.1| Polyprenyl synthetase [Halalkalicoccus jeotgali B3]
          Length = 354

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 89/242 (36%), Gaps = 20/242 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHM----------QTQHNDRLLSAIRYAL-----LGGKKI 53
           L E    +D  ++ LL +                    D +  A+   +      GGK+ 
Sbjct: 5   LTEWRPVVDDAIETLLPRDIDEAYLVEWFGPASHRYDPDAIQRALSDPIWDLLDRGGKRW 64

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           R+ +       F  +    L      E +H  ++I DD+   D   IRRG+P +H ++  
Sbjct: 65  RAVVCLLLLDGFGADPRAYLPYACIPEVLHNGTIIVDDVE--DGAEIRRGEPALHHRFGP 122

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDE 170
             A+ AGN +     ++I      L    +      L   +    +  G  +     +D 
Sbjct: 123 DIALNAGNAMYFLPLKVIGKNPADLDPETQLATYEMLMDELNRTHLGQGMDIYWHRNRDA 182

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            + E +   +   KTG L        AI+       +  +  + E++ I FQ+ DD+LD 
Sbjct: 183 TVAEAEYLEMCACKTGCLGRIVARLAAIITDQPPEVEREVAAYAEDMSIAFQIGDDILDV 242

Query: 231 EE 232
           E 
Sbjct: 243 ES 244


>gi|315453024|ref|YP_004073294.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179]
 gi|315132076|emb|CBY82704.1| Polyprenyl synthetase family [Helicobacter felis ATCC 49179]
          Length = 295

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 24/219 (10%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           + + Q       Q     +  +   L  GK +RS L+          H   +   A IE 
Sbjct: 3   EQIAQRIQQFLAQVQSAEVERMANLLGQGKMLRSKLILAIC----PEHPQLIDFCAIIEM 58

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           I   SL+HDD+  +DN   RR   +++  +    AI+ G+     AF  ++   T++   
Sbjct: 59  IQSASLLHDDV--IDNAQTRRAHDSINHIFGNQNAIMLGDVFYAKAFLELTKLDTEIAQL 116

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESGAI 198
           +             +  +  G++ D++       D T+   I + K+ +LM  +C   A+
Sbjct: 117 V----------AHSVMELSRGEIKDVRASDTFHTDITRYIDIIQDKSASLMVASCAGAAL 166

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           +        +  R FG N GI FQ+ DDLLD  +  PK+
Sbjct: 167 LGGLDS---QAYRTFGLNFGIAFQIMDDLLDITQ--PKE 200


>gi|282162726|ref|YP_003355111.1| polyprenyl synthetase [Methanocella paludicola SANAE]
 gi|282155040|dbj|BAI60128.1| polyprenyl synthetase [Methanocella paludicola SANAE]
          Length = 285

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 24/229 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
           K ++  +D ++              +  +I ++L   GK++R   V   A +       A
Sbjct: 8   KAVNAGIDRIISAVEL-------PEIRMSIAHSLKTAGKRLRPVSVLLLAEMNGGRADDA 60

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                A+ECIH  SLI DD+  +D G  RRG+ T H ++    A+++G+ L++ A  ++S
Sbjct: 61  TDAALAMECIHTASLIQDDI--VDEGLKRRGEDTSHEKFGMFLAMVSGDYLISRAMMLMS 118

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
                       + +L+ +       M  G++LD++       E       + KT  +  
Sbjct: 119 KYDE--------KTILAFSKA--GLYMAEGELLDVKSRKYKPTEADYVECVRKKTAIMFE 168

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE--DLPKK 237
            + E GA +A A +   E  R  G   GI +Q+ DDL++  +  D  KK
Sbjct: 169 SSFEMGARIAGADEKHAELCRLMGMEFGIAYQIVDDLIEYTQIDDEHKK 217


>gi|260942339|ref|XP_002615468.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720]
 gi|238850758|gb|EEQ40222.1| hypothetical protein CLUG_04350 [Clavispora lusitaniae ATCC 42720]
          Length = 535

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 44/211 (20%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N       R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ L
Sbjct: 226 AANGILPKQRRLAEIVEMIHTASLLHDDV--IDLSDARRGRPSGNIAFTNKMAVLAGDFL 283

Query: 124 LTYAFEIISSPKTQLKDNIRSQLML----------------------------------- 148
           L  A   IS  +      + S  +                                    
Sbjct: 284 LGRASVAISRLRNPEVVELISTSIANLVEGEFMQLKNTVLTDDKTVNNDGDEKVVPTPTG 343

Query: 149 -----SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAH 201
                   +++   G  G       D  +D    + + K  +KT +LM  +  S A+++ 
Sbjct: 344 KVPVEQHEYSVASPGQSGENGQVSHDTNVDAAFEYYLHKTYLKTASLMSKSARSAAVLSG 403

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A  N  +    FG NLG+ FQ+ DD+LD   
Sbjct: 404 ARDNVVDSCYDFGRNLGLCFQIVDDMLDYTS 434


>gi|326382545|ref|ZP_08204236.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198664|gb|EGD55847.1| polyprenyl synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 360

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/250 (26%), Positives = 100/250 (40%), Gaps = 33/250 (13%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSA----IRYALLGGKKIRSFLVTECASLFN--- 66
             +D +L          +   +   +  A      + L GGK++R   V           
Sbjct: 9   AAVDEVLTTFFDSGRPALDAIYP-AVAEAGDVLADFVLAGGKRVRPSFVYAGWRCGPDTA 67

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------------- 110
            +   ALRVGAAIE I   +LIHDD+  +D    RRG PTVH +                
Sbjct: 68  GDDTMALRVGAAIELIQACALIHDDI--LDRSDTRRGNPTVHRRFEGLHAGRRLTGDSAH 125

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKT---QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           Y    AI+ G+  L +A +++           D       + +  +     +LGGQ+LDI
Sbjct: 126 YGVSAAILLGDLALAWADDLVHGIGPATDGWADPRPLPRSVGVLWSRMRTEVLGGQLLDI 185

Query: 168 QDEFIDETQV---FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +E   +  V   + + + KT A       + GA ++ A       L   G +LGI FQL
Sbjct: 186 TNESSRDESVTAAYRVMEYKTAAYTVARPLQLGAALSGADAALSGSLHRIGLDLGIAFQL 245

Query: 224 ADDLLDCEED 233
            DD+L    D
Sbjct: 246 RDDVLGVFGD 255


>gi|307595824|ref|YP_003902141.1| polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551025|gb|ADN51090.1| Polyprenyl synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 296

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 12/199 (6%)

Query: 36  NDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDL 92
            D LL+A  + +   GK IR  LV   A           A+   A++E IH  SL+ DD+
Sbjct: 38  PDNLLNATYHYIRNRGKLIRPTLVLLMAYALGNGSGLERAILPAASVELIHTASLLQDDI 97

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             MD   IRRG  T +  Y   TA++A + ++  A E          DN     +L+ + 
Sbjct: 98  --MDQQRIRRGVKTPYSIYGPHTAMLASDLIIAKAVEYAIRSG----DNDIVFELLNSSI 151

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLR 211
            + +      ++    +  ID      +   KT +L+  +   GA   +        ++R
Sbjct: 152 KLAIGQSFESELSSRANVTID--DYLRLIYYKTASLIESSMVVGAYSVNVKDDEVISKIR 209

Query: 212 CFGENLGIIFQLADDLLDC 230
             G  +GI FQ+ DD++D 
Sbjct: 210 DVGRFVGIAFQVRDDVIDY 228


>gi|76802911|ref|YP_331006.1| multifunctional short/ long-chain (E)-prenyl diphosphate synthase
           [Natronomonas pharaonis DSM 2160]
 gi|76558776|emb|CAI50369.1| probable multifunctional short/ long-chain (E)-prenyl diphosphate
           synthase [Natronomonas pharaonis DSM 2160]
          Length = 353

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 29/259 (11%)

Query: 1   MNGGLPSKLQENSKRIDTIL-----DDLLLQTASHMQTQHNDRLLSAIRYAL-------- 47
           M   L S      + I+++L     D  L          ++    SA+++AL        
Sbjct: 1   MQRVLESWRPAVDETIESVLPRTVDDAYLTSFFGEATYAYDP---SALQHALSDPVWELL 57

Query: 48  -LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
             GGK+ R+ L        + +    L   A  E +H  ++I DD+   D    RRG P 
Sbjct: 58  DRGGKRWRAVLFLLLVEALDDDPDAYLEYAAIPEILHNGTIIVDDVE--DGATHRRGDPA 115

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           +H  +    A+ AGN +     +II+     L  + R      L + +    +  G  + 
Sbjct: 116 LHHTHGTDIALNAGNAMYFLPLKIITHNPADLDADTRLAAYEMLMYELNRTHLGQGMDIH 175

Query: 167 IQDE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
             ++    I E Q   +   KTG L        AI+ + ++  +  L  + E + I FQ+
Sbjct: 176 WHNQQEIDITEDQYLEMCACKTGCLARIVARLAAIVTN-NEAAESDLAAYAEEMAIAFQI 234

Query: 224 ADDLLDCE------EDLPK 236
           ADD+LD E       D  K
Sbjct: 235 ADDVLDVEYALEEGGDFGK 253


>gi|62959203|gb|AAY23709.1| farnesyl diphosphate synthase [Roseobacter sp. JL-126]
          Length = 147

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 86/147 (58%), Gaps = 4/147 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLM 147
           HDD+P MDN  +RRG+PT HI +DE TAI+AG+ L T AFE++S SP   LK   +  ++
Sbjct: 1   HDDMPGMDNDDLRRGQPTCHIAFDEATAILAGDALQTLAFELLSESPLGGLKAERQLSMV 60

Query: 148 LSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ- 204
            +L    G  GM  GQ +D+Q   + +++ ++  + + KTGAL+  A   G +       
Sbjct: 61  NALARASGSAGMCAGQAIDLQATGQHVNDHELEHMHRHKTGALIEAAATIGVLCGEEEAL 120

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
             +   + F  +LG+ FQ+ DD+LD E
Sbjct: 121 KWQPHFKEFATHLGLAFQVHDDILDVE 147


>gi|300934189|ref|ZP_07149445.1| putative polyprenyl diphosphate synthase [Corynebacterium resistens
           DSM 45100]
          Length = 389

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/272 (22%), Positives = 100/272 (36%), Gaps = 48/272 (17%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAI-RYALLGGKKIRSFLVTE 60
            L + L      ++  L+  L  +       +    + +  +  + + GGK++R      
Sbjct: 19  ALHAPLSAVPAAVNHRLNQYLSASLQEFWGINPLFTQAIEVMGDFIVGGGKRVRPTFAWA 78

Query: 61  ------------CASLFNVNHLTALRVG-------AAIECIHCYSLIHDDLPSMDNGYIR 101
                        A   + +      +        +A E I   +LIHDD+  +D    R
Sbjct: 79  GIRAGLESSGTSTAKASSRSQEEPTELANGFLSAISAFEFIQACALIHDDI--VDQSDTR 136

Query: 102 RGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           RG PTVH +                Y    AI+ G+  L +A +++       +   + +
Sbjct: 137 RGHPTVHREFERHHRDRKWLGSSEHYGISQAILIGDLALAWADDLLLDSGLSTQRLHQCR 196

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTG-ALMCFACESGAIMAH 201
                        ++GGQ+LDI  E      V     + K KT    +      GA +A 
Sbjct: 197 ----HAWRAMRTEVIGGQILDIAVEASGTENVDHAWDVIKYKTASYTVARPLHVGAALAG 252

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AS+   E LR  GE++G+ FQL DD L    D
Sbjct: 253 ASEELIEFLRTIGEDIGVAFQLRDDQLGVFGD 284


>gi|320593030|gb|EFX05439.1| hexaprenyl pyrophosphate synthetase [Grosmannia clavigera kw1407]
          Length = 556

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 24/176 (13%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D+   RRG P+ ++++    A++AG+ LL  A   ++ 
Sbjct: 298 RLAEITELIHTASLLHDDV--IDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALAR 355

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----------QVFMIQKM 183
            +      + S ++           ++ G+ + +++   DET                 +
Sbjct: 356 LRNAEVVELLSTVIA---------NLVEGEFMQLKNTARDETNPVWSEATLQYYLQKTYL 406

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
           KT +L+  +C + A++  A     +    +G+NLG+ FQL DD+LD     +DL K
Sbjct: 407 KTASLISKSCRAAALLGGADAQTVDAAYAYGKNLGLAFQLVDDMLDYTRSAKDLGK 462


>gi|296123158|ref|YP_003630936.1| hypothetical protein Plim_2915 [Planctomyces limnophilus DSM 3776]
 gi|296015498|gb|ADG68737.1| protein of unknown function DUF116 [Planctomyces limnophilus DSM
           3776]
          Length = 634

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 23/204 (11%)

Query: 49  GGKKIRSFLVTECASLFNVN--------------HLTALRVGAAIECIHCYSLIHDDLPS 94
           GGK++R F+                              RV  AIE  H  SLIHDD+  
Sbjct: 304 GGKRLRPFITLAAYDALTGAAGLTADHQDQALEYPPAVNRVAMAIEAFHKASLIHDDIQ- 362

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            DN   R GK T+H QY    AI  G+ L+   + ++S+ + +L   + + ++     + 
Sbjct: 363 -DNDQFRYGKETLHRQYGVGPAINLGDHLIGAGYRLVSASRKELGAEVAADIL--DAFSA 419

Query: 155 GLQGMLGGQMLDIQD-----EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               +  GQ  ++Q        +   +   I  +KT      A  +G  MA    +  E 
Sbjct: 420 AHMKLCEGQGAELQWSRSGRHDLTPAEAMKIYALKTSPAFEAALYAGIRMAGPVDDYAEM 479

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +  F  +LG+ FQ+ +DL D   D
Sbjct: 480 ITQFSRHLGVAFQILNDLSDWLGD 503


>gi|311741515|ref|ZP_07715339.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311303685|gb|EFQ79764.1| polyprenyl synthetase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 359

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 85/212 (40%), Gaps = 29/212 (13%)

Query: 45  YALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + L GGK++R                +    LR  A++E I   +LIHDD+  +D    R
Sbjct: 46  FVLDGGKRVRPTYAWAGYLAAGRGEEDPAAMLRAAASLEFIQACALIHDDI--IDASNTR 103

Query: 102 RGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           RG PTVH                  +    AI+ G+  L YA ++            R++
Sbjct: 104 RGNPTVHRGVEKLHRESEYLGDPEFFGTSVAILVGDLALVYAEDMFQDSGLSAAALHRAR 163

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAH 201
                        ++GGQ+LDI  E      V +   + + KT A  +      GA +A 
Sbjct: 164 SPWRGMRT----EVIGGQLLDISLEAAGSESVELANSVNRYKTAAYTIERPLHLGAAIAG 219

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AS+      R +G ++GI +QL DD L    D
Sbjct: 220 ASEELIAAFRGYGHDIGIAYQLRDDQLGVFGD 251


>gi|308197999|ref|XP_001386769.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
           [Scheffersomyces stipitis CBS 6054]
 gi|149388806|gb|EAZ62746.2| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
           [Pichia stipitis CBS 6054]
          Length = 465

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 39/206 (18%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N       R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ L
Sbjct: 161 AMNGILPKQRRLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFL 218

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ----------------------GMLG 161
           L  A   I+  +      + S  + +L     +Q                          
Sbjct: 219 LGRASVAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVMSNDSQSIVNDGEKKVIPEPT 278

Query: 162 GQMLDIQDEF-------------IDETQVFMIQK--MKTGALMCFACESGAIMAHASQNE 206
           G++   Q E+             +D    + + K  +KT +LM  +  + A+++ A  + 
Sbjct: 279 GKVPTKQHEYSVSTPAEVDHITNVDAAFEYYLHKTYLKTASLMSKSSRAAAVLSGAHDDI 338

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
            E    FG NLG+ FQ+ DD+LD   
Sbjct: 339 IENCYEFGRNLGLCFQIVDDMLDYTA 364


>gi|62959209|gb|AAY23712.1| farnesyl diphosphate synthase [Synechococcus sp. CCMP840]
          Length = 145

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 2/134 (1%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PT H  YDE  AI+AG+ LLT AFE+++     +  +   +++  L+   G  G+
Sbjct: 12  LRRGRPTNHKVYDEAVAILAGDALLTRAFEMVALRSPAVPADRLLKVVGELSLVAGAPGL 71

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ++D++ E   +D   +  I   KTGAL+     +GA++  A     + LR +   +
Sbjct: 72  VGGQVVDLECEGKEVDLETLEYIHLHKTGALLSACVITGAMIGGADDALIKALRTYARGI 131

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ DD+LD E
Sbjct: 132 GLAFQIIDDILDVE 145


>gi|257054017|ref|YP_003131850.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692780|gb|ACV13117.1| Polyprenyl synthetase [Halorhabdus utahensis DSM 12940]
          Length = 308

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 35/235 (14%)

Query: 3   GGLPSKLQENSK-----RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
             +   LQ+  K     RI   L++           ++ +RL   I     GGK+IR  L
Sbjct: 5   DDVFEWLQDEVKPTVDDRIQQWLEEF----------EYAERLWYPID---TGGKRIRPGL 51

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           V   + + +V    AL + A +E +H ++L+HDD+  +D    RR +PT+  +Y E +AI
Sbjct: 52  VFLISEMVDVPREDALDIAAGVELLHNFTLVHDDI--IDGDEYRRDEPTLWAKYGEGSAI 109

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
             G+ +   A             ++    ++++T+   +       +   +   I   + 
Sbjct: 110 NLGDMMFAKAILCF----PPETRDLALDTVITVTNGEQMD------IDFAERRDITVEEY 159

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + + KTGAL+    ++   +A    +    L  F  +LG  FQ+ DDLLD +E
Sbjct: 160 MTMVRRKTGALLELCVDAPLALAETDLD----LSGF-TSLGPAFQIRDDLLDFQE 209


>gi|32473980|ref|NP_866974.1| polyprenyl synthetase [Rhodopirellula baltica SH 1]
 gi|32444517|emb|CAD74516.1| polyprenyl synthetase [Rhodopirellula baltica SH 1]
          Length = 659

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 21/215 (9%)

Query: 42  AIRYALLGGKKIRSFLVTECA-SLFNVN-------------HLTALRVGAAIECIHCYSL 87
           A+ +   GGK  R F+      ++   +                  R   +IE  H  SL
Sbjct: 321 ALDFLARGGKHSRPFITLAAYDAMMGGDGTGADGEDVLNRVPDAVRRAALSIETFHKASL 380

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+   D    R G+P VH ++   TAI  G+ L+   + ++S        +  +++ 
Sbjct: 381 VHDDIE--DGDAFRYGQPAVHQRFGTATAINVGDYLIGLGYRLLSRNMMGDDVDAGTRVD 438

Query: 148 LSLTHNIGLQGMLGGQ-----MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           L  +       +  GQ       D +D  +       I  +KT      A  SG  MA  
Sbjct: 439 LLDSLAAAHVRLSEGQGAELLWRDAKDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGD 498

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           +    + +R F  NLG+ FQ+ +DL D   D   K
Sbjct: 499 ASALIDPIRKFSRNLGVAFQIINDLNDWAGDDSNK 533


>gi|62959181|gb|AAY23698.1| farnesyl diphosphate synthase [Halomonas sp. JL-104]
 gi|62959191|gb|AAY23703.1| farnesyl diphosphate synthase [Paracoccus sp. JL-65]
          Length = 143

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/134 (36%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PT H  Y E  AI++G+ LLT +FE+++   +   D  + +++  L+   G +GM
Sbjct: 12  LRRGLPTNHKVYGEAVAILSGDALLTKSFELVAD--SPFDDRSKVKIISMLSKAAGAEGM 69

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ+ DI+ E   +   Q+  + K KTG L+ FA  +G +++   ++E  +LR F E++
Sbjct: 70  VGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEHI 129

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ DD+LD E
Sbjct: 130 GLAFQIRDDILDVE 143


>gi|62959185|gb|AAY23700.1| farnesyl diphosphate synthase [Bacillus sp. JL-26]
          Length = 143

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/134 (36%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PT H  Y E  AI++G+ LLT +FE+++   +   D  + +++  L+   G +GM
Sbjct: 12  LRRGLPTNHKVYGEAVAILSGDALLTKSFELVAD--SPFDDRSKVKIISMLSKAAGAEGM 69

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ+ DI+ E   +   Q+  + K KTG L+ FA  +G +++   ++E  +LR F E++
Sbjct: 70  VGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEHI 129

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ DD+LD E
Sbjct: 130 GLAFQIRDDILDVE 143


>gi|62959195|gb|AAY23705.1| farnesyl diphosphate synthase [Micrococcus sp. JL-76]
          Length = 143

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/134 (36%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PT H  Y E  AI++G+ LLT +FE+++   +   D  + +++  L+   G +GM
Sbjct: 12  LRRGLPTNHKVYGEAVAILSGDALLTKSFELVAD--SPFDDRSKVKIISMLSKAAGAEGM 69

Query: 160 LGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +GGQ+ DI+ E   +   Q+  + K KTG L+ FA  +G +++   ++E  +LR F E++
Sbjct: 70  VGGQVADIEGESMALSLEQLESVHKRKTGKLLEFAAVAGGVISGLDEHELNKLRLFAEHI 129

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ DD+LD E
Sbjct: 130 GLAFQIRDDILDVE 143


>gi|15823920|dbj|BAB69143.1| geranylgeranyl pyrophosphase synthase [Streptomyces avermitilis]
          Length = 379

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 29/243 (11%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA- 72
           + +D  L + + + A+      +D      R+ L GGK+ RS  V             A 
Sbjct: 3   RLLDRFLAERVARAAALDPVFAHDIAERVARFTLDGGKRTRSQFVWWAHRACGGPAAGAE 62

Query: 73  --LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEV 114
             LRVGAA+E I   +L+HDD+  MD   +RRG+P +H                 ++ E 
Sbjct: 63  AALRVGAALELIQTCALVHDDV--MDGSRLRRGRPALHTDVSAQYADAVLPAPGTRFGEA 120

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID- 173
            AI+AG+  L +A ++++          R + + S         M+ GQ LDIQ +    
Sbjct: 121 AAILAGDLALAWADDVVADTDLAPDPGRRVREVWSCLR----MEMVAGQYLDIQGQATSS 176

Query: 174 --ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             E +      +K+    +    E GA +A A     + L   G  +G+ FQL DDL D 
Sbjct: 177 HSEARAMRAACLKSALYSVQRPLELGAALAGADTATTQALCSAGRCVGLAFQLRDDLHDV 236

Query: 231 EED 233
            E+
Sbjct: 237 FEE 239


>gi|325969747|ref|YP_004245939.1| polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708950|gb|ADY02437.1| Polyprenyl synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 296

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 81/208 (38%), Gaps = 12/208 (5%)

Query: 27  TASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH--LTALRVGAAIECIH 83
             S +     DRLL A  + +   GK IR  LV   A           A+   A++E IH
Sbjct: 29  EESFIGLWMPDRLLKATYHYIRNRGKLIRPTLVLLMAYALGNGTGIERAILPAASVELIH 88

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+  MD   IRRG  T +  Y   TA++A + ++  A E              
Sbjct: 89  TASLLQDDI--MDQQRIRRGVETPYSIYGSHTAMLASDLIIAKAVEFAIRSGDNDIVFEL 146

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA- 202
               + L     L+  L G+                +   KT +L+  +   GA   +  
Sbjct: 147 LNSSIKLAVGQSLESELSGRD------NTTIDDYLKLIYYKTASLIESSMIVGAYSVNVK 200

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC 230
                 R+R  G  +GI FQ+ DD++D 
Sbjct: 201 DNEVISRIRDIGRFVGIAFQVRDDVIDY 228


>gi|257459693|ref|ZP_05624802.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter
           gracilis RM3268]
 gi|257443118|gb|EEV18252.1| putative hexaprenyl pyrophosphate synthetase [Campylobacter
           gracilis RM3268]
          Length = 330

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 56/252 (22%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
             +ID I+   +        ++  DRL          GKK+RS L+   A         +
Sbjct: 2   QDQIDLIMKSFIADCGYEPASEMFDRL--------SPGKKLRSKLLLNIAR----KDEKS 49

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           LR+ A IE I   SL+HDD+  +D   +RRGKP+++  Y    A++ G+ L + A+  +S
Sbjct: 50  LRLCAIIELIQAASLLHDDV--IDESSVRRGKPSINATYGSKNAVMLGDILYSKAYFELS 107

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTGALM 189
             ++++   +          ++ +  +  G+++D+    D   D ++   +  +KT AL+
Sbjct: 108 KFESRIAAAL----------SLAVTKLAVGELMDVSLSDDFNDDASKYLQMIYLKTSALI 157

Query: 190 CFACESGAIMAHASQNEK-----------------------------ERLRCFGENLGII 220
                 GA +   S   +                              +   +G+NLG+ 
Sbjct: 158 EEVARCGAFLKFGSAENRGEISDMSGKKNEGEIPSAAKDHNKISSASAKFGKYGKNLGLA 217

Query: 221 FQLADDLLDCEE 232
           FQ+ DD+LD  +
Sbjct: 218 FQIIDDILDVTQ 229


>gi|221633012|ref|YP_002522237.1| heptaprenyl diphosphate synthase component II [Thermomicrobium
           roseum DSM 5159]
 gi|221155353|gb|ACM04480.1| heptaprenyl diphosphate synthase component II [Thermomicrobium
           roseum DSM 5159]
          Length = 334

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 8/165 (4%)

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F  +    +   A IE +H  SLIHDD  S+D   +RRG+PT++  +D    I+ G+ + 
Sbjct: 67  FRYDLDRLVPAAAGIELLHTASLIHDD--SLDGASVRRGQPTLNALFDPSVVIMVGDYMF 124

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             +  + +S       N R   + +        G L  ++   +   +           K
Sbjct: 125 ARSAMLAASTM-----NPRVLAVFAHCLGSICDGQLR-ELFAARRTDVSLDDYQHRIYGK 178

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           T +L   + E GAI+A A  ++ E LR FG  +G+ FQ+ DD+LD
Sbjct: 179 TASLFAGSAEIGAILAEAPDDQIELLRDFGGAMGMAFQIVDDVLD 223


>gi|269127237|ref|YP_003300607.1| polyprenyl synthetase [Thermomonospora curvata DSM 43183]
 gi|268312195|gb|ACY98569.1| Polyprenyl synthetase [Thermomonospora curvata DSM 43183]
          Length = 353

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 78/205 (38%), Gaps = 22/205 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNH----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GGK++R                          A++E +   +LIHDD+  MD    RRG+
Sbjct: 45  GGKRLRPAFCYWGWRAAGGEDIEAATGIAAAAASLELLQASALIHDDV--MDASDTRRGQ 102

Query: 105 PTVHIQY----------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           P+ H ++                 E +AI+ G+  L ++ E+  +     +   R + + 
Sbjct: 103 PSAHRRFEAMHREHGWRGGAAAFGEGSAILLGDLCLAWSAEMFDTSGLDTEALRRGRPVF 162

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            L     + G     +   +     E  + +++       +      GA +A  +    E
Sbjct: 163 DLMRTEVICGQYLDMLESARGAGTVERALTVVEFKSAKYTIERPLHMGAELAGGTPEVVE 222

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            LR +G  LGI FQL DD+L    D
Sbjct: 223 ALRAYGRPLGIAFQLRDDVLGVFGD 247


>gi|227504679|ref|ZP_03934728.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum
           ATCC 6940]
 gi|227198689|gb|EEI78737.1| geranylgeranyl pyrophosphate synthase [Corynebacterium striatum
           ATCC 6940]
          Length = 363

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 36/243 (14%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTE----CASLFNVNHLT 71
           L + L Q    +  +  + +++A  +     L GGK+IR             L +     
Sbjct: 20  LSEFLAQRRPEV-AEIGEPVVNATNFLESFVLDGGKRIRPTYAWAGFLGAHGLESGEDAQ 78

Query: 72  ALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEV 114
           A+    +++E I   +LIHDD+  +D+   RRG PTVH                  + + 
Sbjct: 79  AMATAASSLEFIQACALIHDDI--IDSSDTRRGNPTVHRAVAAQHRAKGYHGDADFFGQS 136

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            AI+ G+  L +A +++           R++   S         ++GGQ+LDI  E    
Sbjct: 137 VAILVGDLALAWAEDMLQGSGLSGAALHRARGPWSGMRT----EVIGGQILDISLEAAGS 192

Query: 175 TQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             + +   + + KT A  +      GA +A A     +  R +G ++GI FQL DD L  
Sbjct: 193 EDLALANSVNRYKTAAYTIERPLHLGAAVAGAEPALIDAFRGYGRDIGIAFQLRDDQLGV 252

Query: 231 EED 233
             D
Sbjct: 253 FGD 255


>gi|291401904|ref|XP_002717322.1| PREDICTED: COenzyme Q (ubiquinone) biosynthesis family member
           (coq-1)-like [Oryctolagus cuniculus]
          Length = 512

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 85/224 (37%), Gaps = 55/224 (24%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR- 74
           + I  +LL+ TA          L     Y   G GK  R  +V   A   N++H  +   
Sbjct: 235 EDIRKELLISTA---------ELKEMSEYYFDGKGKAFRPVIVVLMARACNIHHNNSRDV 285

Query: 75  ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +    E IH  SL+HDD+  +D+   RRGK TV+  + E   I           
Sbjct: 286 QASQRSIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKVI----------- 332

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
                     +D +R + +               Q+   ++E             KT +L
Sbjct: 333 ----------EDLVRGEFL---------------QLGSKENENERFAHYLEKTFKKTASL 367

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  +C++ +++        E    +G+N+GI FQL DD+LD   
Sbjct: 368 IANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTS 411


>gi|291009770|ref|ZP_06567743.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 274

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           +V         +   A+    A+E +H +SL+HDD+  MD    RR +PTV   +    A
Sbjct: 1   MVLLSCEAAGGDPADAVPAAVAVELLHNFSLLHDDV--MDGDLTRRHRPTVWSLFGTSNA 58

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFID-- 173
           I+AG+ +L  A  I+S+  ++        L         +  +  GQ  DI   E +D  
Sbjct: 59  ILAGDAILGLAPRILSATGSE------HALTAIDWFGKCVVKLCEGQAADISFSERVDVG 112

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                 + + KTG L+  +C  G + A A + +   LR FG  +G+ FQL DDLL    D
Sbjct: 113 IDACVAMARAKTGELLGTSCALGGLFAGADRTQITALREFGSEIGLAFQLVDDLLGIWGD 172


>gi|295394724|ref|ZP_06804939.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972320|gb|EFG48180.1| polyprenyl synthetase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 354

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 100/246 (40%), Gaps = 34/246 (13%)

Query: 14  KRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
             +D +L+  L   A  +         L   IR   +GGK+IR+        L    H  
Sbjct: 12  AHVDAVLEQELGTFAHELAGLSPVASELTDPIRAFCVGGKRIRALATWWGYQLAGGTHPG 71

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVT 115
              + A++E +H  +LIHDD+  +DN  +RRG P+ H                  +    
Sbjct: 72  IAHMAASVELLHAAALIHDDI--IDNSDMRRGNPSTHAFFSQMHGSAGFEGDARSFGINA 129

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEF 171
           AIIAG+  L  + ++ ++    + D N+R+      TH+   + ++ GQ LDI+      
Sbjct: 130 AIIAGDVCLGLSEQLFNASGLNVTDPNVRA------THDAFRRDVMMGQYLDIRIQAAPV 183

Query: 172 IDETQVFMIQKMKTGALMCFAC----ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            D   V    ++ T     ++     E GA +A A       L  F   LG  FQL DD 
Sbjct: 184 PDSQIVDRAMEVLTYKSAKYSVEQPFELGARLAGAKPQFVHDLSAFTLPLGQAFQLRDDE 243

Query: 228 LDCEED 233
           L    D
Sbjct: 244 LGVFGD 249


>gi|290955089|ref|YP_003486271.1| polyprenyl synthatase [Streptomyces scabiei 87.22]
 gi|260644615|emb|CBG67700.1| putative polyprenyl synthatase [Streptomyces scabiei 87.22]
          Length = 345

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 2/188 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A  GGK +R  L    A +        +    A+E +H +SL+HDD+  MD    RR +P
Sbjct: 59  AASGGKGVRQALAVLGAEVVGAPARAGVPAAVAVELVHVFSLLHDDI--MDGDVERRRRP 116

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV   Y    A++AG+ L   A E +++ +            L          +L     
Sbjct: 117 TVWKAYGTGPAVLAGDALFALAVETLATAEPGASALRTLSAALGELVRGQADDLLFAARP 176

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E +   +   + + KTGAL+  A   GA++          L   G  LG+ FQ+ D
Sbjct: 177 WAGPERVRPAEYRAMAERKTGALLGCAAALGALLGGGPPAAVAALDRAGRRLGLAFQIVD 236

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 237 DVLGIWGD 244


>gi|254293445|ref|YP_003059468.1| trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814]
 gi|254041976|gb|ACT58771.1| Trans-hexaprenyltranstransferase [Hirschia baltica ATCC 49814]
          Length = 340

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 16/231 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L   + E+   ++ +L +  + + + +       + +       GGK++R  +    A
Sbjct: 19  DTLTELVAEDLSSVEALLSERAISSVATIPDMSAYLIGA-------GGKRLRPLITLAAA 71

Query: 63  SLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                     L  + AA+E IH  +L+HDD+  +D   +RRGK    + +    +I+ G+
Sbjct: 72  YAAGGKGSAPLHSLAAAVEYIHTATLLHDDV--VDESDLRRGKKAAKMLWGNSASILVGD 129

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L   AF ++   ++     +R   +LS    +  +G +  Q+  I    +       I 
Sbjct: 130 FLFARAFTLMVETRS-----LRILDILSNASCVIAEGEVK-QLAAIGKADLPIEDYMDIV 183

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KT AL   A  +GA+   A   E + L  +G  LG  FQL DD LD + 
Sbjct: 184 EAKTAALFEAAARAGALTVVAEGKESDGLAEYGRRLGRAFQLVDDALDYDG 234


>gi|218660042|ref|ZP_03515972.1| geranyltranstransferase protein [Rhizobium etli IE4771]
          Length = 194

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 72/148 (48%), Positives = 107/148 (72%), Gaps = 1/148 (0%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
               ++L+ N++ I+ +L  LL   A   +    + L SA+ YA+L GGK++R FLV E 
Sbjct: 6   DTFETRLKNNAREIEALLVALLSPNALSDEIARPETLRSAMHYAVLNGGKRLRPFLVVES 65

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+L   +   ALR+GAA+EC+HCYSL+HDDLP+MD+  +RRGKPTVHI++DE TAI+AG+
Sbjct: 66  AALLGGDAQAALRIGAALECVHCYSLVHDDLPAMDDDDMRRGKPTVHIKFDEATAILAGD 125

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLS 149
            LLTYAF+I+++P+T L D  ++ L+L+
Sbjct: 126 SLLTYAFDIVAAPETALPDASKASLVLA 153


>gi|294628908|ref|ZP_06707468.1| farnesyltranstransferase [Streptomyces sp. e14]
 gi|292832241|gb|EFF90590.1| farnesyltranstransferase [Streptomyces sp. e14]
          Length = 291

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 24/222 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-- 68
              + ID +L D L +   + +      L+  +   ++GGK+IR  L             
Sbjct: 33  AERQAIDDVLKDFLEKRRKNCEPSQMGGLIELLADFMVGGKRIRPILTMLGWQAVTGEAA 92

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH------------IQYDEVTA 116
             T ++V A++E  H ++LIHDD+  MD+   RRG+PT+H             ++    A
Sbjct: 93  GDTVVQVAASLEMFHAFALIHDDI--MDDSDTRRGRPTIHRALADNSSGDRTRRFGLGAA 150

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---D 173
           ++ G+   T++ +I+ +     +       +++      +     GQ LD+Q       D
Sbjct: 151 VLLGDLAFTWSDQILHTAGLTSEQTAAVLPLVTEMRTEVML----GQYLDLQATGALTDD 206

Query: 174 ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFG 214
                 + + KT    +      GA +A A          + 
Sbjct: 207 VDATLTVNRYKTAKYTIERPLHIGAALAGADPRAMAACTEYA 248


>gi|329767036|ref|ZP_08258564.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341]
 gi|328837761|gb|EGF87386.1| hypothetical protein HMPREF0428_00261 [Gemella haemolysans M341]
          Length = 170

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 10/167 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVT 59
           MN    + ++EN  ++++   + + +          D L  +I Y+L+  GKKIR     
Sbjct: 1   MN-NFKNFIEENKDQLNSFAKEYVEKLD------MPDILKESITYSLVNDGKKIRPLSFL 53

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                + V++     +  AIE +H YSL+HDDLP MDN   R GK T H  + +  A++ 
Sbjct: 54  YLLKYYEVDYTNYFDIALAIELVHTYSLVHDDLPEMDNDDYRWGKLTNHKVFGQDLAVLT 113

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           G+ +LT AFE++S   + +K +++ +L+    +  G  GM+ GQ+ D
Sbjct: 114 GDAMLTLAFEVLSE--SNVKSDLKVRLIKQFANYSGAMGMIAGQVYD 158


>gi|170782926|ref|YP_001711260.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169157496|emb|CAQ02687.1| geranylgeranyl pyrophosphate synthase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 340

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 92/239 (38%), Gaps = 23/239 (9%)

Query: 17  DTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTAL 73
           + +LD    ++    +   ++  +L   +     GGK+ R  +V          +   A 
Sbjct: 2   NGVLDAFFARSLVRAEVMGDEYVKLWRTLESNTAGGKRFRPRMVMAAYDGLGGQDVQAAA 61

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-----------------DEVTA 116
            VGAA E +H   ++HDD+  +D  + RRG P V   Y                     A
Sbjct: 62  HVGAAFEMLHTALIVHDDV--IDRDFTRRGGPNVSGAYRDIATTQGLPQPLAEHRGMSAA 119

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           +IAG+  L  A+ +I +   +         +L         G L      +  +     +
Sbjct: 120 VIAGDLALVNAYRLIDASGVRDLTRSHLMEILDDAVFASAAGELIDVEFSLTADVPSVDE 179

Query: 177 VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +  ++++KT         ++GA++A A       L  F  ++GI +Q+ DD+L    D 
Sbjct: 180 ILRMERLKTAVYSFEAPLQAGAVLAGARPEVVAALGDFDRDIGIAYQVVDDVLGVFGDE 238


>gi|322379568|ref|ZP_08053905.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1]
 gi|321147962|gb|EFX42525.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS1]
          Length = 301

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 17/217 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +  ++  +  +  S ++   + ++L  ++  L  GK +RS L+    S    NH   +  
Sbjct: 2   VAELIPAIQARIQSFLEEVKSPQVLKMVQ-NLGQGKMLRSQLILAICS----NHPQIVDF 56

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE I   SL+HDD+  +D+   RRG P+++  +    AI+ G+   + AF  +++  
Sbjct: 57  CAIIEMIQSASLLHDDV--IDHAQTRRGNPSLNATFGNTNAIMLGDVFYSKAFCELANFS 114

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
            ++   + +Q ++ L+        + G +    ++ I         + K+ +L+  +   
Sbjct: 115 KEIV-QLIAQSVVELSRGEIKD--VQGCLAFNPNKAI----YLDTIEDKSASLIAASSCG 167

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A++     +   + R FG + G+ FQ+ DDLLD  +
Sbjct: 168 AALLQGLEPS---KYRDFGRHFGMAFQMVDDLLDITQ 201


>gi|319949926|ref|ZP_08023925.1| putative polyprenyl synthase [Dietzia cinnamea P4]
 gi|319436405|gb|EFV91526.1| putative polyprenyl synthase [Dietzia cinnamea P4]
          Length = 359

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 30/213 (14%)

Query: 45  YALLGGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           + L GGK++R        +             +   AA+E I   +L+HDD+  +D    
Sbjct: 48  FVLDGGKRMRPRFALAGWAASRPDAGPAPEEVVTACAALELIQACALVHDDI--VDASDT 105

Query: 101 RRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           RRG+PTVH                 +Y    AI+ G+  L++A E+  +         R+
Sbjct: 106 RRGRPTVHRAIESAHRRDGWDGDAARYGVSQAILVGDLALSWADEMFVTSGVDPAALGRA 165

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGA-LMCFACESGAIMA 200
                   +     +L GQMLDI  E     DE     + + KT A  +      GA +A
Sbjct: 166 L----GPWHAMKTEVLSGQMLDILAEASGATDEQTPARVNRFKTAAYTVERPLHIGAELA 221

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+      LR FG  +G  FQL DDLL    D
Sbjct: 222 GATDETVAALREFGVAVGQAFQLRDDLLGVFGD 254


>gi|255513726|gb|EET89991.1| Polyprenyl synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 383

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 10/236 (4%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVT 59
           +  L   + +  K I  I+ + + + A+ +         S +   Y        R  L+ 
Sbjct: 34  DATLEGFISKTKKSIHAIITEYVRKPAALVSDAAAAERYSEMLFDYINRPSHYTRPMLLM 93

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A +++      L + AA++    + LIHDD+   D   +RRG PT+H  Y    A+  
Sbjct: 94  LTALMYDNQDPATLLLAAAVQLSQEWILIHDDIE--DKSEMRRGMPTLHKLYGSSAALHI 151

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQ-----LMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
           G+ L +  + +           IR +     + ++ +   G    L             E
Sbjct: 152 GDVLHSVMWNMFIDYLGVANPEIRERLYNKFIEVAYSTASGQFQELNFMYGKDGLRSAKE 211

Query: 175 TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  F I   KT    M    + GAI A   +N  E+L   GEN GI FQ+ DD++D
Sbjct: 212 STYFEIASGKTSSYSMRGPLQLGAISAGQDENIVEKLGAIGENAGIAFQINDDIID 267


>gi|119719035|ref|YP_919530.1| polyprenyl synthetase [Thermofilum pendens Hrk 5]
 gi|119524155|gb|ABL77527.1| Polyprenyl synthetase [Thermofilum pendens Hrk 5]
          Length = 302

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 12/225 (5%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + L     RI   L  LL + +     +    ++    YAL GGK +R  L    AS+F 
Sbjct: 2   ASLASIEDRI-AYLGGLLTRYSGDRVKELFPEIVEEASYALFGGKMLRGTLSLLVASMFT 60

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 L +  A+E +H  SL+HDD+   D    RRG+P+   +Y    AI   + L+  
Sbjct: 61  AQVEKVLPIALAVELMHAASLVHDDIA--DASPTRRGRPSFWSKYGLEDAITVPHVLMPV 118

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A  +++    +      +    S    +    +L G+ +              + + KT 
Sbjct: 119 AISLVADAGVEAVKESMNAWRRSALGQLWDTRILRGREV--------PVGYEKLIEYKTA 170

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           A+   +C    ++A   ++  E  R +G   G+++Q+ DD  D E
Sbjct: 171 AVFEASCTLP-LIAIGRRDIVESGRVYGRFFGLLYQVLDDFSDAE 214


>gi|309790120|ref|ZP_07684693.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
 gi|308227845|gb|EFO81500.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
          Length = 358

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 8/166 (4%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 +   A+ E IH  SL+HDDL  +D    RRG+ TVH ++D   A++ G+     
Sbjct: 98  YQLSHVIHAAASAELIHAASLVHDDL--VDQAARRRGRVTVHARWDNDVALMVGDYFFA- 154

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
               ++S +  L  + R     +    + ++G L   M+    E     Q F     KT 
Sbjct: 155 ----LASAEMSLSPDPRIITFYAQAVQVIVEGELSPVMVAEPAETA-RRQYFYKTGAKTA 209

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L   AC++G       + +   L  +G ++G+ FQ+ DD+LD   
Sbjct: 210 VLFEAACKAGMAAGGGDEAQIAALAGYGFDVGVAFQIVDDVLDFIG 255


>gi|294631343|ref|ZP_06709903.1| polyprenyl synthetase [Streptomyces sp. e14]
 gi|292834676|gb|EFF93025.1| polyprenyl synthetase [Streptomyces sp. e14]
          Length = 383

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 15/191 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK IR  LV   A         A  V AA   E +H ++L+HDD+  MD    RR +PTV
Sbjct: 97  GKAIRPALVLAAAHAIGGARGRAAAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRPTV 154

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              + +  AI+AG+           + +   +D   +    +      +  +  GQ  D 
Sbjct: 155 WTVFGDADAILAGDA------LQALALRLLAEDPHPAAPAAAARLAACVVELCAGQHADT 208

Query: 168 QDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             E      +   +V  + + KTGAL+  AC  G + A A++ E   L  FG   G+ FQ
Sbjct: 209 ALESRAPTEVTLAEVLAMAEAKTGALLGCACAVGGLYAGAAEEEVRALDAFGRQAGLAFQ 268

Query: 223 LADDLLDCEED 233
           L DD++    D
Sbjct: 269 LIDDVIGIWGD 279


>gi|163841244|ref|YP_001625649.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209]
 gi|162954720|gb|ABY24235.1| dimethylallyltransferase [Renibacterium salmoninarum ATCC 33209]
          Length = 362

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 87/238 (36%), Gaps = 26/238 (10%)

Query: 20  LDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--- 74
           L + L    + +   +     L+  I   + GGK++R+ L          N  T+     
Sbjct: 21  LQEFLAVKRNELAEISVDAPALIDTISGLVTGGKRMRALLCYWGWRGAGGNPETSSPITT 80

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAII 118
            GAA+E     +LIHDD+  +D   IRRG P+VH                 ++    AI+
Sbjct: 81  AGAALELFQAAALIHDDI--IDRSDIRRGAPSVHRQFSQLHQRQRWALDPERFGHAAAIL 138

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM--LGGQMLDIQDEFIDETQ 176
           AG+  L+++ E+ SS         RS         +  Q +  L       +       +
Sbjct: 139 AGDLCLSFSEEVFSSINVPAPQKARSVFNTMRAEVMAGQYLDILEEVAGPSRGPENAVER 198

Query: 177 VFMIQKMKTGALM-CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              I + K+           G  +A A  N       F   LG  FQL DD+L    D
Sbjct: 199 AQSIIRYKSAKYSSEHPLVLGGALAGADANLLSGYSAFALPLGEAFQLRDDMLGVFGD 256


>gi|262202475|ref|YP_003273683.1| polyprenyl synthetase [Gordonia bronchialis DSM 43247]
 gi|262085822|gb|ACY21790.1| Polyprenyl synthetase [Gordonia bronchialis DSM 43247]
          Length = 377

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 100/258 (38%), Gaps = 28/258 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVT 59
           N  + +   EN   +D +L+  +      +     D   L   +  AL GGK++R+    
Sbjct: 20  NTAIETLWAENMLGVDAVLNRHVHARGRRLADIDPDIAPLADYLVRALSGGKRLRAAFCL 79

Query: 60  ECAS--LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------ 111
             A           A+   AAIE  H  +LIHDD+  MD+   RRG PTVH ++      
Sbjct: 80  WGARGAAGGDLPAGAVDAAAAIELFHLGALIHDDV--MDHSDRRRGMPTVHRRFADRHTA 137

Query: 112 ----------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                      +  AI+AG+  L ++ E+++   +     I  +     +  +     +G
Sbjct: 138 DGLAGDPEAFGQAVAILAGDLCLMWSDEVLADAVSAASPEIGQRARAVWS--LMRDETVG 195

Query: 162 GQMLDIQDEFIDETQVFM---IQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENL 217
           GQ LD+  +    T +     +   K+           G  +A A  +  +     G   
Sbjct: 196 GQYLDMLAQATPTTSLTRTRLVLHYKSAKYTVAQPLRLGGALAGADDDLLDAYESLGLIA 255

Query: 218 GIIFQLADDLLDCEEDLP 235
           G  FQL DDLL    D+ 
Sbjct: 256 GEAFQLRDDLLGVFGDVA 273


>gi|108804794|ref|YP_644731.1| trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM
           9941]
 gi|108766037|gb|ABG04919.1| Trans-hexaprenyltranstransferase [Rubrobacter xylanophilus DSM
           9941]
          Length = 304

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 13/196 (6%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           A+     GGK++R  L+   A +       ALR  AA E +H  +LIHDD+  +D    R
Sbjct: 20  ALEALTSGGKRLRPLLLLLSAGIGAPVWEEALRAAAATEVLHTATLIHDDI--VDKAKSR 77

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG PT   +Y    A+  G+ L   AF  +SS           +++         +G+  
Sbjct: 78  RGAPTTVARYGREVAVATGDYLFAEAFAALSSIGDP-------RVIREFAEAS--RGLAA 128

Query: 162 GQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           G++   +     +D        K+KT  L   AC +G  +   S  + + L  +G+ LG+
Sbjct: 129 GELEQFRASGGPVDVEDYLEHIKLKTAGLFRAACVAGGTLGGLSLPQIDALATYGQALGL 188

Query: 220 IFQLADDLLDCEEDLP 235
            FQ++DD++D      
Sbjct: 189 AFQMSDDVMDLVGKPG 204


>gi|255530459|ref|YP_003090831.1| trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366]
 gi|255343443|gb|ACU02769.1| Trans-hexaprenyltranstransferase [Pedobacter heparinus DSM 2366]
          Length = 323

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 10/210 (4%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           I   +     +  + M +     L     Y +   GK++R   V   A L      +  R
Sbjct: 11  IAADIAAFEEKFKASMHSDAP-LLDRITHYIVKRKGKQVRPMFVFFAAKLCGGIIESTHR 69

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             A +E +H  +L+HDD+  +DN Y RRG  +++  +    A++ G+ LL     +    
Sbjct: 70  GAALVELLHTATLVHDDV--VDNAYERRGFFSINALWKNKIAVLVGDYLLAKGLLL---- 123

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            +      R   ++S       +G L  Q+  ++   I E   F + + KT +L+   C 
Sbjct: 124 -SVHNSEFRLLQIVSEAVKQMSEGELL-QIEKVRRMDISEELYFDVIRQKTASLIASCCA 181

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            GA  A A +   E++R FGE +GI FQ+ 
Sbjct: 182 CGAASAGADEATIEKMRLFGEKVGIAFQIK 211


>gi|291302480|ref|YP_003513758.1| polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290571700|gb|ADD44665.1| Polyprenyl synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 357

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 87/244 (35%), Gaps = 22/244 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECAS-LF 65
           Q+   R++  L   L +    +    ++   +  A   + L GGK+IR            
Sbjct: 8   QDLQVRVERALSKFLSRQRDRLTGIDSELAPVCEAAEIFILGGGKRIRPAFAYWGFRGAG 67

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-------------- 111
             +    +   +A+E +   +L+HDDL  MD    RRG+P+VH ++              
Sbjct: 68  GEDGDAVVACVSALELLQASALMHDDL--MDGSDTRRGEPSVHRRFALRHTSSGWSGGAD 125

Query: 112 --DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 AI+ G+  +T++ E+ +           ++            G     +   Q 
Sbjct: 126 DFGACAAILLGDLCMTWSDEMFTGAGMPDAAVAAARADFDWMRTEVSAGQYLDVLTQAQR 185

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +      + + +       +      GA +A  S   +     FG  LG  FQL DD+L 
Sbjct: 186 DTTSARALKVARYKAAKYTIERPLLIGAALAGGSPELRSAYSAFGLPLGEAFQLRDDVLG 245

Query: 230 CEED 233
              D
Sbjct: 246 VFGD 249


>gi|297197031|ref|ZP_06914428.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
 gi|197715682|gb|EDY59716.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
          Length = 351

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 21/240 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
               R+D +L  ++ + A  +       + +   +  A+  GK++R+             
Sbjct: 10  AFKSRVDDVLRAVVAREADELAAIDPALEPVAGQLEAAVADGKRLRAAFCYWGWRAAGQP 69

Query: 69  HLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT------------ 115
              AL R  A++E +H  +++HDDL  +D+  +R G+PT H+                  
Sbjct: 70  DSDALVRAAASMELVHAAAVVHDDL--IDDSPLRHGRPTAHVALRGAVHGRPRAVSAARS 127

Query: 116 -AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A++ G+ L++ A ++ ++         R++ + S+     + G      +       D 
Sbjct: 128 LAMLVGDLLMSLAGQMFATSGLPAAYLARARPLWSVLARELIAGECL--EILRTGTVPDT 185

Query: 175 TQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                + + KT    +      G  +A A +  +E    +G  LG  FQL DDLL    D
Sbjct: 186 ATSLKVIRYKTAKYTVEQPLLIGGTLAGAGERLREGYSAYGLPLGEAFQLRDDLLGLFGD 245


>gi|126465401|ref|YP_001040510.1| polyprenyl synthetase [Staphylothermus marinus F1]
 gi|126014224|gb|ABN69602.1| Polyprenyl synthetase [Staphylothermus marinus F1]
          Length = 365

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 37/259 (14%)

Query: 8   KLQENSKRI-DTILDDLLLQ---TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA- 62
           +L E ++R+ +  L ++  +    A  + ++  D    +  Y L GGK++R+FLV     
Sbjct: 6   ELLEFARRVTNKTLQEIFDEVDVEAKGVSSKVVDIPFISRDYTLRGGKRLRAFLVLIGYW 65

Query: 63  --SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH------------ 108
                  N  +   + A IE +  Y L+HDD+  MD   IRRG PTVH            
Sbjct: 66  SRKWGYGNIDSIKYLMAGIEFLQSYLLVHDDI--MDEDEIRRGGPTVHVWFDRKCREEGL 123

Query: 109 ----IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                 Y    AII G+ L + A  + +     L D    +L+ + T   G++ +  GQ 
Sbjct: 124 ISRCKHYGVSQAIIVGDYLESLAVSMFTRLN--LPDYALKELIKTYTR--GVRLVAYGQF 179

Query: 165 LD-----IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMA-HASQNEKERLRCFGENL 217
           LD        + + E  V+ I  +KT    +      GAI +   +      L  +    
Sbjct: 180 LDVLIANTPLKKVSEDDVYNIHMLKTASYTVELPLHLGAIASLMYNNELLMELSQYALPA 239

Query: 218 GIIFQLADDLLDCEEDLPK 236
           GI FQL DD+L    D PK
Sbjct: 240 GIAFQLQDDILGLYGD-PK 257


>gi|319956645|ref|YP_004167908.1| polyprenyl synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419049|gb|ADV46159.1| Polyprenyl synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 298

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 30/225 (13%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L+   ++I+  ++DL    A  + ++            L  GK++R+ L+   A     +
Sbjct: 2   LEAVERQIEHYINDLEDADARQLYSR------------LPAGKRLRARLILTIA----GS 45

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            L+A++  A +E IH  SL+HDD+  +D+ Y RRG+P+++  Y   T+I+ G+ L + AF
Sbjct: 46  GLSAVKTAAIVEMIHAASLLHDDV--IDDAYTRRGRPSINALYGNKTSIMFGDVLYSKAF 103

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKMKTGA 187
             +     Q+          S+ + + L  +   Q + + + F  D      +   KT A
Sbjct: 104 YELVDIDRQVA--------RSIANAVVLLSLGERQDVLLSESFNPDRDAYLKMIYQKTAA 155

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L+  A ES AI+A     ++E  R +G NLGI FQ+ DD+LD  +
Sbjct: 156 LIEAAAESAAILAG---KDREAYRTYGRNLGIAFQMIDDILDITQ 197


>gi|242052439|ref|XP_002455365.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
 gi|241927340|gb|EES00485.1| hypothetical protein SORBIDRAFT_03g009380 [Sorghum bicolor]
          Length = 364

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 70/237 (29%), Positives = 115/237 (48%), Gaps = 12/237 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              +   L  N++ +   LD  L            + L  ++RY+ L GGK++R  L   
Sbjct: 67  TFDIERYLSANARTVHDALDLALQ------GLGCPEVLRESMRYSVLAGGKRLRPALAIA 120

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L       A+ V  A+E +H  SLIHDD+P MD+  +RRG+P+ H+ + E TA+++G
Sbjct: 121 ACELVGGPAAAAVPVACAVEMMHTASLIHDDMPCMDDDPLRRGRPSNHVAFGEPTALLSG 180

Query: 121 NGLLTYAFEII--SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DET 175
           + LL  AFE +  +S    +  +   + +L L    G+ G+  GQ+ D+  +        
Sbjct: 181 DALLALAFEHVARASAGAGVPADRALRAVLELGSAAGVGGIAAGQVADMASQGASSGSLA 240

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  I   KT  L+  A  SGA++      E ER+R +   LG++ Q+ DD+LD   
Sbjct: 241 ALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLLQVVDDVLDVTA 297


>gi|307324885|ref|ZP_07604090.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306889383|gb|EFN20364.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 355

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 21/241 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
                R+D +L   +   A  +         +   +  A+  GK++R+            
Sbjct: 13  AAFKTRVDEVLHRFIGLEAEQLSAIDPALGPVAGQLEAAVADGKRLRAAFCYWGWRAVGQ 72

Query: 68  NHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-------------YDE 113
               AL R  A++E +H  +++HDDL  +D+  +R G+PT HI                 
Sbjct: 73  PDSDALVRAAASMELVHAAAVVHDDL--IDDSPLRHGRPTAHIALRAAVRRRPRAVAAAR 130

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             A++ G+ L++ A ++ ++         R++ + SL     + G     +    D    
Sbjct: 131 SLAMLVGDLLMSLAGQMFATSGLPAAYLARARPLWSLLARELIAGECLEILRTGADPDTT 190

Query: 174 ETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +    + + KT    +      G  +A A Q  +E    +G  LG  FQL DDLL    
Sbjct: 191 AS--LKVIRYKTAKYTVEQPLLIGGALAGAGQRLREGYSAYGLPLGEAFQLRDDLLGLFG 248

Query: 233 D 233
           D
Sbjct: 249 D 249


>gi|50842220|ref|YP_055447.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes
           KPA171202]
 gi|282854286|ref|ZP_06263623.1| polyprenyl synthetase [Propionibacterium acnes J139]
 gi|50839822|gb|AAT82489.1| geranylgeranyl pyrophosphate synthase [Propionibacterium acnes
           KPA171202]
 gi|282583739|gb|EFB89119.1| polyprenyl synthetase [Propionibacterium acnes J139]
 gi|314923275|gb|EFS87106.1| polyprenyl synthetase [Propionibacterium acnes HL001PA1]
 gi|314966417|gb|EFT10516.1| polyprenyl synthetase [Propionibacterium acnes HL082PA2]
 gi|314980998|gb|EFT25092.1| polyprenyl synthetase [Propionibacterium acnes HL110PA3]
 gi|315091657|gb|EFT63633.1| polyprenyl synthetase [Propionibacterium acnes HL110PA4]
 gi|315093037|gb|EFT65013.1| polyprenyl synthetase [Propionibacterium acnes HL060PA1]
 gi|315103189|gb|EFT75165.1| polyprenyl synthetase [Propionibacterium acnes HL050PA2]
 gi|315107050|gb|EFT79026.1| polyprenyl synthetase [Propionibacterium acnes HL030PA1]
 gi|327327861|gb|EGE69637.1| putative polyprenyl synthetase [Propionibacterium acnes HL103PA1]
          Length = 365

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 91/248 (36%), Gaps = 28/248 (11%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT---ECASLFNVN 68
            S RI + LDD   +            +L A R    GGK++R          A+     
Sbjct: 18  VSARILSFLDD--EKRVIDAIGAELSPVLDAARDYTAGGKRLRPAFCYWGHAAAADQPTE 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYD 112
               L+  A++E +H  +L+HDDL  MD+   RRG P+VH                 Q+ 
Sbjct: 76  PAGLLQAAASLEFLHVSALVHDDL--MDHSDTRRGLPSVHRHFEAAHGIAHGDGPAEQFG 133

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              AI+ G+ LL ++ ++ +S   +      +  +L         G +            
Sbjct: 134 FDIAILLGDLLLMWSSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGS 193

Query: 173 DETQVF----MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           D          + + K     +   C+ G  +A  S   ++ +  FG  +G  FQ  DDL
Sbjct: 194 DSESALDLVGRVVEYKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDL 253

Query: 228 LDCEEDLP 235
           L    D  
Sbjct: 254 LGVFGDAE 261


>gi|117928903|ref|YP_873454.1| polyprenyl synthetase [Acidothermus cellulolyticus 11B]
 gi|117649366|gb|ABK53468.1| Polyprenyl synthetase [Acidothermus cellulolyticus 11B]
          Length = 339

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 13/187 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +RS L    A          +    A+E +H +SL+HDD+  MD    RR +PT  
Sbjct: 53  GGKAVRSALAVLSAQAAGAPAAVGIPGAVAVELVHNFSLLHDDV--MDGDEERRHRPTAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++AG+ LL  AF+++   +                     Q ++ GQ  D+ 
Sbjct: 111 TVFGRSAALLAGDALLGLAFDVLLDAEHGDAAQ--------RCLGSATQELIAGQFDDLD 162

Query: 169 DEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +   +   +   KT ALM  A   GA +A A       L  FG +LG+ FQL D
Sbjct: 163 FETRLDVSLDECVSMAGAKTAALMACASSIGARLAGADPALVNALDDFGRHLGLAFQLVD 222

Query: 226 DLLDCEE 232
           DLL    
Sbjct: 223 DLLGIWG 229


>gi|327543259|gb|EGF29692.1| polyprenyl synthetase [Rhodopirellula baltica WH47]
          Length = 616

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 21/215 (9%)

Query: 42  AIRYALLGGKKIRSFLVTECA-SLFNVN-------------HLTALRVGAAIECIHCYSL 87
           A+ +   GGK  R F+      ++   +                  R   +IE  H  SL
Sbjct: 278 ALDFLARGGKHSRPFITLAAYDAMMGGDGTGADGEDVLNRVPDAVRRAALSIETFHKASL 337

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+   D    R G+P VH ++   TAI  G+ L+   + ++S        +  +++ 
Sbjct: 338 VHDDIE--DGDAFRYGQPAVHQRFGTATAINVGDYLIGLGYRLLSRNMMGDDVDAETRVD 395

Query: 148 LSLTHNIGLQGMLGGQ-----MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           L  +       +  GQ       D +D  +       I  +KT      A  SG  MA  
Sbjct: 396 LLDSLAAAHVRLSEGQGAELLWRDAKDRRLTPLDALKIYALKTSPAFEAALYSGVRMAGD 455

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           +    + +R F  NLG+ FQ+ +DL D   D   K
Sbjct: 456 ASALIDPIRKFSRNLGVAFQIINDLNDWAGDDSNK 490


>gi|313606489|gb|EFR83338.1| polyprenyl synthetase [Listeria monocytogenes FSL F2-208]
          Length = 206

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 21/214 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+  +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIEKNI----QIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQVFMIQ 181
           L    F+I+S+  + +      + +   + NI    M    QM       +   +     
Sbjct: 119 LFCICFKILSAHASSV------ENIEFNSKNIEKILMGELDQMRTSYKTNVTVREYLTRI 172

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
             KT  L   +C SGA  + A++    +    G 
Sbjct: 173 SGKTAQLFALSCYSGATGSKATRMTVAKCYNIGH 206


>gi|322379645|ref|ZP_08053966.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5]
 gi|321147939|gb|EFX42518.1| putative octaprenyl-diphosphate synthase [Helicobacter suis HS5]
          Length = 301

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 17/217 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +  ++  +  +  S ++   + ++L  ++  L  GK +RS L+    S    NH   +  
Sbjct: 2   VAELIPAIQARIQSFLEEVKSPQVLKMVQ-NLGQGKMLRSQLILAICS----NHPQIVDF 56

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            A IE I   SL+HDD+  +D+   RRG P+++  +    AI+ G+   + AF  +++  
Sbjct: 57  CAIIEMIQSASLLHDDV--IDHAQTRRGNPSLNATFGNTNAIMLGDVFYSKAFCELANFS 114

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
            ++   + +Q ++ L+        + G +    ++ I         + K+ +L+  +   
Sbjct: 115 KEIV-QLIAQSVVELSRGEIKD--VQGCLAFNPNKAI----YLDTIEDKSASLIAASSCG 167

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A++     +   + R FG + G+ FQ+ DDLLD  +
Sbjct: 168 AALLQGLEPS---KYRDFGRHFGMAFQMVDDLLDITQ 201


>gi|94985718|ref|YP_605082.1| polyprenyl synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555999|gb|ABF45913.1| Polyprenyl synthetase [Deinococcus geothermalis DSM 11300]
          Length = 329

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 86/226 (38%), Gaps = 19/226 (8%)

Query: 22  DLLLQTASHMQTQHND---RLLSAI--RYALLGGKKIRSFLVTECASLFNVNH-----LT 71
           DLL +  S +  + +    R  SA+   Y   GGK IRS L+   A              
Sbjct: 4   DLLPRVLSLLPNRGDRPELRAFSAMLRDYPERGGKGIRSELLLASARAHGALPSTSAWEG 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + A +E    + LIHDD+   D+   RRG+P +H  Y    AI  G+ L    +  +
Sbjct: 64  ALWLAAGLELFQNWVLIHDDIE--DDSEERRGRPALHRLYGVPVAINVGDALHASMWAAV 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMC 190
                         ++        L        +  +   + E     + ++KT    + 
Sbjct: 122 HRAGVPGGLEEFLNMVWRTAEGQHLDLT----WVQERSWNLGEADYLAMVRLKTALYTVV 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                GA+ A    +  ER    GE LG  FQ+ DD+L+   D  K
Sbjct: 178 VPLRLGALAAGVLPD--ERFTAAGEALGAAFQIRDDVLNLAGDPAK 221


>gi|284032149|ref|YP_003382080.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
 gi|283811442|gb|ADB33281.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
          Length = 368

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 11/175 (6%)

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           +         A+    A+E +H +SL+HDD+  MD    RR + T    +    AI+AG+
Sbjct: 96  SQAVGGTTAAAVPAAVAVELVHNFSLLHDDV--MDCDTTRRHRATAWTVFGLGPAILAGD 153

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVF 178
            LL+ AF+++ S      D+       +      +Q ++ GQ+ D   E    +  ++  
Sbjct: 154 ALLSLAFDVLVSSGEPAADD------GAKVLGQAVQELVEGQLADAHFEIRNDVTLSECL 207

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + ++KTGAL+  +   GA+       + + LR FGE+LG+ +Q  DDLL    D
Sbjct: 208 RMAQLKTGALLGCSTALGAMFGGGRSEQVDHLRLFGEDLGLAYQYVDDLLGIWGD 262


>gi|126348010|emb|CAJ89730.1| putative farnesyl diphosphate synthase [Streptomyces ambofaciens
           ATCC 23877]
          Length = 347

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 11/187 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +   A+    A+E +H ++L+HDD+  +D   +RR +P   
Sbjct: 62  GGKAVRPALALLSAVAVGADPAAAVPGAVAVELVHDFTLLHDDV--IDGDALRRHQPAAW 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+ LL  A   ++    +       +L+        L  ++ GQ  D+ 
Sbjct: 120 SLFGTPAAVLTGDALLVAALRALTQASPRRAGAAVQELV------AALLELVEGQSHDVA 173

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +       +   KTGAL+  AC  G ++A A       LR FG +LG+ FQ AD
Sbjct: 174 FEKAHDVSVADYLTMAAGKTGALIGCACALGGVLAGADAVRVGGLREFGRHLGVAFQCAD 233

Query: 226 DLLDCEE 232
           D+L    
Sbjct: 234 DILGIWG 240


>gi|255085660|ref|XP_002505261.1| predicted protein [Micromonas sp. RCC299]
 gi|226520530|gb|ACO66519.1| predicted protein [Micromonas sp. RCC299]
          Length = 327

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 31/223 (13%)

Query: 33  TQHNDRLLSAIRYAL---LGGKKIRSFLVTECASLF--------------------NVNH 69
           T     L +A  Y       GK++R  ++   AS                      +   
Sbjct: 6   TSEVPALATAAEYFFKVGAEGKRMRPTVLLLMASALTDLSSGGADALSRARAASVPDDTR 65

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
               R+    E IH  SL+HDD+  +D+   RRG   ++++     AI+AG+ LL  A  
Sbjct: 66  RRQQRLAEITELIHVASLLHDDV--LDSAATRRGLRALNLEVGNKLAILAGDFLLARASV 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            ++S +      + S+++  L     +      QM    +  +     F     KT +L+
Sbjct: 124 TLASLRNTEVIELLSRVLEHLVTGEVM------QMTAKPERLMSFDHYFQKTYFKTASLI 177

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + ++  ++             +G +LG+ FQ  DD+LD   
Sbjct: 178 ANSAKAIVLLGGHDTETASHAYDYGRHLGLAFQFQDDVLDFVG 220


>gi|297526316|ref|YP_003668340.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255232|gb|ADI31441.1| Polyprenyl synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 365

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 37/259 (14%)

Query: 8   KLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAI---RYALLGGKKIRSFLVTECA- 62
           +L E ++RI +  L ++     +  +   +  +        Y L GGK++R+FLV     
Sbjct: 6   ELLEFARRITNEALREVFDTVDAEARGVSSKVVDIPFISRDYTLRGGKRLRAFLVLIGYW 65

Query: 63  --SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH------------ 108
                  +  +   + A IE +  Y L+HDD+  MD   IRRG PTVH            
Sbjct: 66  SRKWGYGSIDSVKYLMAGIEFLQSYLLVHDDI--MDEDEIRRGGPTVHVWFDKKCREGGL 123

Query: 109 ----IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                 Y    AII G+ L + A  + +     L D    +L+ + T   G++ +  GQ 
Sbjct: 124 IGRCKHYGVSQAIIVGDYLESLAVSMFTRLN--LPDYALKELIKTYTR--GIRLVAYGQF 179

Query: 165 LD-----IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMA-HASQNEKERLRCFGENL 217
           LD        + + E  V+ I  +KT    +      GAI +    +     L  +    
Sbjct: 180 LDVLIANTPLQKVSEDDVYNIHLLKTASYTVELPLHLGAIASLMYDKELLTELSQYALPA 239

Query: 218 GIIFQLADDLLDCEEDLPK 236
           GI FQL DD+L    D PK
Sbjct: 240 GIAFQLQDDILGLYGD-PK 257


>gi|255325357|ref|ZP_05366463.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141]
 gi|255297922|gb|EET77233.1| polyprenyl synthetase [Corynebacterium tuberculostearicum SK141]
          Length = 359

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 85/212 (40%), Gaps = 29/212 (13%)

Query: 45  YALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + L GGK++R                + +  LR  A++E I   +LIHDD+  +D    R
Sbjct: 46  FVLDGGKRVRPTYAWAGYLAAGRGEEDPVAMLRAAASLEFIQACALIHDDI--IDASNTR 103

Query: 102 RGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           RG PTVH                  +    AI+ G+  L YA ++            R++
Sbjct: 104 RGNPTVHRGVEKLHRESEYLGDPEFFGTSVAILVGDLALVYAEDMFQDSGLSAAALHRAR 163

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAH 201
                        ++GGQ+LDI  E      V +   + + KT A  +      GA  A 
Sbjct: 164 SPWRGMRT----EVIGGQLLDISLEAAGSESVELANSVNRYKTAAYTIERPLHLGAATAG 219

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AS+      R +G ++GI +QL DD L    D
Sbjct: 220 ASEELIAAFRGYGHDIGIAYQLRDDQLGVFGD 251


>gi|240171992|ref|ZP_04750651.1| polyprenyl synthase [Mycobacterium kansasii ATCC 12478]
          Length = 385

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 14/206 (6%)

Query: 44  RYALL-GGKKIRSFLVTECASL----FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           R+ L   GK+IR+ L   C  L      V+   A+ +  AIE  H  SLIHDD+   D  
Sbjct: 94  RHVLATPGKRIRAGLGLACFRLQPSAATVSPAEAIDLACAIEMFHESSLIHDDIC--DGS 151

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQ 157
            +RRG  +V   +    A  AG  L   A +I++           R     ++T+   L 
Sbjct: 152 LLRRGARSVPAAFGVRIAARAGFHLAGTALQILARVVADNPAVFARVGEDPAITYLDQLS 211

Query: 158 GMLGGQMLDIQDEFIDET----QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +  GQ+++     ID++        +   KTG L   AC  G        +    L  +
Sbjct: 212 ELSFGQLIETLPPAIDDSVLRRHYERVAGAKTGTLFRLACSYGGTAGGVDADGLRALMRY 271

Query: 214 GENLGIIFQLADDLLDCEE--DLPKK 237
            + L + FQ+ DD+ D E    L KK
Sbjct: 272 ADQLALAFQIMDDVCDVEGGPSLGKK 297


>gi|238879551|gb|EEQ43189.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Candida albicans WO-1]
          Length = 507

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 53/210 (25%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ LL  A   I+ 
Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256

Query: 134 PKTQLKDNIRSQLMLSLTHNIGL------------------------------------- 156
            +      + S  + +L     +                                     
Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316

Query: 157 QGMLGGQMLDIQDEFIDETQV------------FMIQK--MKTGALMCFACESGAIMAHA 202
             +   Q      +  D   V            + + K  +KT +LM  +C + A+++ A
Sbjct: 317 YSVQQQQRTTNGGDSADAAVVVDHEINVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGA 376

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +  E    FG NLG+ FQ+ DD+LD   
Sbjct: 377 QDDIIENCYQFGRNLGLCFQIVDDMLDYTS 406


>gi|116203433|ref|XP_001227527.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88175728|gb|EAQ83196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 452

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 71/266 (26%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL-------------------------- 64
           + + H     +A  Y    GK +R  +V   +                            
Sbjct: 104 LGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATSLCPKAPQRQQATAQVSAAIDTSIS 163

Query: 65  -----------FNVNHLTAL----------RVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
                              L          R+    E IH  SL+HDD+  +D+   RRG
Sbjct: 164 PPSILSDFNPSAGTESEPVLADAGILPSQRRLAEITELIHTASLLHDDV--IDHSVSRRG 221

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            P+ ++++    A++AG+ LL  A   ++  +      + + ++           ++ G+
Sbjct: 222 SPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVIELLATVIA---------NLVEGE 272

Query: 164 MLDIQDEFIDET----------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            + +++   DET                 +KT +L+  +C + A++  A     +    +
Sbjct: 273 FMQLKNTARDETNPQWSEDALTYYLQKTYLKTASLISKSCRAAALLGGADAQTVDAAYSY 332

Query: 214 GENLGIIFQLADDLLDC---EEDLPK 236
           G NLG+ FQL DDLLD    E++L K
Sbjct: 333 GRNLGLAFQLVDDLLDYTRSEKELGK 358


>gi|15805956|ref|NP_294656.1| polyprenyl synthase [Deinococcus radiodurans R1]
 gi|6458656|gb|AAF10509.1|AE001946_1 polyprenyl synthase [Deinococcus radiodurans R1]
          Length = 320

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 29/235 (12%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA- 72
              +T + ++L      +     D +         GGK++R  +    A           
Sbjct: 4   AAFETRMREVLRSDVEFIAIIGEDLV-------TAGGKRVRPLVTLLAAQALGAGPDALA 56

Query: 73  --------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   LR+   +E +H  SL+HDDL  +D+   RRG+ T   ++  V ++++G+ +L
Sbjct: 57  TSHSWDELLRLSVCVELLHSASLLHDDL--IDDSDKRRGQETAFRRFGNVVSVMSGDFML 114

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQ 181
                 +S         +     L+         +  G++L  Q            F + 
Sbjct: 115 ARLLGELS--------GMPGSPALTRAFGQAASVICEGEVLQFQVASYADYSFENYFQVI 166

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             KT AL+  A ++ A++  A  + ++ L  FG   G+ FQ+ DDLLD   +  +
Sbjct: 167 HGKTAALLELAAQAPAMLLGADDSARDALSTFGREYGMAFQMQDDLLDLLGEEAQ 221


>gi|269794596|ref|YP_003314051.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
 gi|269096781|gb|ACZ21217.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
          Length = 361

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 23/240 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECA-SLFNVNHLTA 72
           +D++LDD   +         +D  +L ++++ A  GGK++R  L+T     L   +   A
Sbjct: 22  VDSVLDDFFAEAIDRSDAYGSDYTQLWTSLQSASQGGKRLRPLLLTGVYDQLGGTDTALA 81

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-----------------DEVT 115
             +GAA+E +H   ++HDD+  +D+  +RRG+  V   +                     
Sbjct: 82  ATIGAAVELLHTAFVVHDDV--IDHDVVRRGRLNVSGTFAQRARAEGADDERAENLGAAA 139

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
            I+AG+  LT A  +++              +      +   G L      +    +   
Sbjct: 140 GILAGDLALTGAHRLVAFSDAPASTRRDLVHLFDHAVYVTAAGELSDVRYSLDLAPVGLA 199

Query: 176 QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            +  +   KT         ++GA++A A     E L   G  +G  FQL DD+     D 
Sbjct: 200 DIVAMAAHKTAVYSFELPLQAGAVLAGADPRTVEWLSHVGRLVGTAFQLLDDIDGVFGDE 259


>gi|170290882|ref|YP_001737698.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174962|gb|ACB08015.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 289

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L+    ++M+    D L+  ++    GGK+IR  ++              L   AA+E I
Sbjct: 37  LMEALRNNMENPFADPLIEFMK----GGKRIRPAILFLINEACGGGGSPEL-AAAAVELI 91

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SLIH     +D+   RRG P+ HI++    AI+  + +L+   EI+S       ++ 
Sbjct: 92  HTASLIH--DDIIDDSDSRRGIPSFHIKHGTEMAILIADFILSIVLEIVSKY-----EDK 144

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           R   +LS    +   G +   +L  + + I       + K KT +L   A   GA++A  
Sbjct: 145 RIGRLLSEATKLMSIGEMMEVILLRRGDPISVEDYLNVLKYKTASLFQTASSLGALIAGR 204

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD 229
             +  E +  +G  LG+ +Q+ DDLLD
Sbjct: 205 D-DLYEEMGLYGLYLGLSYQIRDDLLD 230


>gi|184201140|ref|YP_001855347.1| polyprenyl synthase [Kocuria rhizophila DC2201]
 gi|183581370|dbj|BAG29841.1| polyprenyl synthase [Kocuria rhizophila DC2201]
          Length = 370

 Score =  134 bits (339), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 33/252 (13%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           +  + +D  +         H+     D  RL+ A+     GGK++R+ L           
Sbjct: 17  QFREDLDARIRGFFAVEREHVTAISPDATRLVDAVGQLTEGGKRLRARLCHWGWRAAGGE 76

Query: 69  H--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY--------------- 111
                 +   A++E     +LIHDD+  +D    RRG+P+VH  +               
Sbjct: 77  AGSDVVVAAAASLELFQTAALIHDDI--LDRSDTRRGRPSVHRVFEALHRESGWAADPAH 134

Query: 112 -DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
                A++ G+  L++A ++ +    ++     ++       +     ++ GQ LDI  E
Sbjct: 135 FGVSAAVLTGDMSLSFAEQLFADAAARVAPQAGAR--AREIFSTMRTEVMAGQYLDIHAE 192

Query: 171 --------FIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                        +   + + K+    +      GA +A A +        F   LG  F
Sbjct: 193 VAPPAAEPARQLERAMTVLRYKSAKYSVEHPVAIGAALAGADEAFLRACAAFTLPLGEAF 252

Query: 222 QLADDLLDCEED 233
           QL DD+L    D
Sbjct: 253 QLRDDVLGVFGD 264


>gi|296395152|ref|YP_003660036.1| trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985]
 gi|296182299|gb|ADG99205.1| Trans-hexaprenyltranstransferase [Segniliparus rotundus DSM 44985]
          Length = 352

 Score =  134 bits (338), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 29/245 (11%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +      +Q +  R++ I+    + +     +   + L+ A      GGK+ R       
Sbjct: 25  SAAFADAVQVSLDRVEDII-RAEVDSGIEAMSAVAEHLVKA------GGKRFRPLFAVVA 77

Query: 62  ASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             L   +         AA+E IH  +L HDD+  MD   +RRG P  ++++    AI+AG
Sbjct: 78  GKLGQPDQQGAVEVAAAALELIHLATLYHDDV--MDEATMRRGVPAANVRWGNQVAILAG 135

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------ 174
           + L   A  +I+   ++         +++ T       ++ GQ  D+     D+      
Sbjct: 136 DYLFARACGLIAQLGSEATA------IVAHTFA----ELVTGQFRDVVGAGADQGNAAKI 185

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---E 231
                    KT +L+        +   A Q+ ++RL   G   G+ FQ+ADD++D     
Sbjct: 186 EHYLATIHGKTASLIGACGRLAGLAVRADQDVQDRLASIGVLTGMAFQIADDIIDIGSGS 245

Query: 232 EDLPK 236
            D  K
Sbjct: 246 ADSGK 250


>gi|302525469|ref|ZP_07277811.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4]
 gi|302434364|gb|EFL06180.1| geranylgeranyl pyrophosphate synthase [Streptomyces sp. AA4]
          Length = 375

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 99/248 (39%), Gaps = 34/248 (13%)

Query: 14  KRIDTILDDLLLQTASHM---QTQHNDRLLSAIRYALLGGKKIRSFLVT-----ECASLF 65
             ++  L D L +  S +   +      + +   + L GGK+IR             +  
Sbjct: 24  AHVERALADFLGRAGSEILRTEPSVAAGIEALSGFVLGGGKRIRPTFAWWGWRGAGGAAS 83

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------I 109
                 AL+  A++E I   +LIHDDL  +D+   RRG+PTVH                 
Sbjct: 84  GPLAEGALQAVASLELIQACALIHDDL--IDSSDSRRGRPTVHVAAEKLHAGRGWLGSPS 141

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   +A++ G+  L +A ++ +      +    ++             +L GQ LD++ 
Sbjct: 142 VFGLASAVLVGDLALAWADDMFAEAPLPAETIAAAR----PAWRAMRTEVLAGQYLDVRT 197

Query: 170 EFI---DETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + +          I ++KT A         GA +A A +     L  FG ++G+ FQL D
Sbjct: 198 QAVGDASPEAALRIDRLKTAAYTVQRPLHLGASLAGADEQLIATLLEFGGDVGVAFQLRD 257

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 258 DLLGVFGD 265


>gi|289426213|ref|ZP_06427959.1| polyprenyl synthetase [Propionibacterium acnes SK187]
 gi|289426856|ref|ZP_06428582.1| polyprenyl synthetase [Propionibacterium acnes J165]
 gi|295130308|ref|YP_003580971.1| polyprenyl synthetase [Propionibacterium acnes SK137]
 gi|289153378|gb|EFD02093.1| polyprenyl synthetase [Propionibacterium acnes SK187]
 gi|289159945|gb|EFD08123.1| polyprenyl synthetase [Propionibacterium acnes J165]
 gi|291376896|gb|ADE00751.1| polyprenyl synthetase [Propionibacterium acnes SK137]
 gi|313764760|gb|EFS36124.1| polyprenyl synthetase [Propionibacterium acnes HL013PA1]
 gi|313772490|gb|EFS38456.1| polyprenyl synthetase [Propionibacterium acnes HL074PA1]
 gi|313791810|gb|EFS39921.1| polyprenyl synthetase [Propionibacterium acnes HL110PA1]
 gi|313802103|gb|EFS43335.1| polyprenyl synthetase [Propionibacterium acnes HL110PA2]
 gi|313807220|gb|EFS45707.1| polyprenyl synthetase [Propionibacterium acnes HL087PA2]
 gi|313809725|gb|EFS47446.1| polyprenyl synthetase [Propionibacterium acnes HL083PA1]
 gi|313813232|gb|EFS50946.1| polyprenyl synthetase [Propionibacterium acnes HL025PA1]
 gi|313815825|gb|EFS53539.1| polyprenyl synthetase [Propionibacterium acnes HL059PA1]
 gi|313818266|gb|EFS55980.1| polyprenyl synthetase [Propionibacterium acnes HL046PA2]
 gi|313820028|gb|EFS57742.1| polyprenyl synthetase [Propionibacterium acnes HL036PA1]
 gi|313823163|gb|EFS60877.1| polyprenyl synthetase [Propionibacterium acnes HL036PA2]
 gi|313825560|gb|EFS63274.1| polyprenyl synthetase [Propionibacterium acnes HL063PA1]
 gi|313827798|gb|EFS65512.1| polyprenyl synthetase [Propionibacterium acnes HL063PA2]
 gi|313830635|gb|EFS68349.1| polyprenyl synthetase [Propionibacterium acnes HL007PA1]
 gi|313833855|gb|EFS71569.1| polyprenyl synthetase [Propionibacterium acnes HL056PA1]
 gi|313838435|gb|EFS76149.1| polyprenyl synthetase [Propionibacterium acnes HL086PA1]
 gi|314915252|gb|EFS79083.1| polyprenyl synthetase [Propionibacterium acnes HL005PA4]
 gi|314918519|gb|EFS82350.1| polyprenyl synthetase [Propionibacterium acnes HL050PA1]
 gi|314919783|gb|EFS83614.1| polyprenyl synthetase [Propionibacterium acnes HL050PA3]
 gi|314925515|gb|EFS89346.1| polyprenyl synthetase [Propionibacterium acnes HL036PA3]
 gi|314931797|gb|EFS95628.1| polyprenyl synthetase [Propionibacterium acnes HL067PA1]
 gi|314956056|gb|EFT00454.1| polyprenyl synthetase [Propionibacterium acnes HL027PA1]
 gi|314958462|gb|EFT02565.1| polyprenyl synthetase [Propionibacterium acnes HL002PA1]
 gi|314960299|gb|EFT04401.1| polyprenyl synthetase [Propionibacterium acnes HL002PA2]
 gi|314963108|gb|EFT07208.1| polyprenyl synthetase [Propionibacterium acnes HL082PA1]
 gi|314968056|gb|EFT12155.1| polyprenyl synthetase [Propionibacterium acnes HL037PA1]
 gi|314973637|gb|EFT17733.1| polyprenyl synthetase [Propionibacterium acnes HL053PA1]
 gi|314976230|gb|EFT20325.1| polyprenyl synthetase [Propionibacterium acnes HL045PA1]
 gi|314978163|gb|EFT22257.1| polyprenyl synthetase [Propionibacterium acnes HL072PA2]
 gi|314983561|gb|EFT27653.1| polyprenyl synthetase [Propionibacterium acnes HL005PA1]
 gi|314987750|gb|EFT31841.1| polyprenyl synthetase [Propionibacterium acnes HL005PA2]
 gi|314990228|gb|EFT34319.1| polyprenyl synthetase [Propionibacterium acnes HL005PA3]
 gi|315077572|gb|EFT49630.1| polyprenyl synthetase [Propionibacterium acnes HL053PA2]
 gi|315080356|gb|EFT52332.1| polyprenyl synthetase [Propionibacterium acnes HL078PA1]
 gi|315084615|gb|EFT56591.1| polyprenyl synthetase [Propionibacterium acnes HL027PA2]
 gi|315085951|gb|EFT57927.1| polyprenyl synthetase [Propionibacterium acnes HL002PA3]
 gi|315088631|gb|EFT60607.1| polyprenyl synthetase [Propionibacterium acnes HL072PA1]
 gi|315096382|gb|EFT68358.1| polyprenyl synthetase [Propionibacterium acnes HL038PA1]
 gi|315098240|gb|EFT70216.1| polyprenyl synthetase [Propionibacterium acnes HL059PA2]
 gi|315101070|gb|EFT73046.1| polyprenyl synthetase [Propionibacterium acnes HL046PA1]
 gi|327325893|gb|EGE67683.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA2]
 gi|327330588|gb|EGE72334.1| putative polyprenyl synthetase [Propionibacterium acnes HL097PA1]
 gi|327332234|gb|EGE73971.1| putative polyprenyl synthetase [Propionibacterium acnes HL096PA3]
 gi|327442612|gb|EGE89266.1| polyprenyl synthetase [Propionibacterium acnes HL013PA2]
 gi|327445334|gb|EGE91988.1| polyprenyl synthetase [Propionibacterium acnes HL043PA2]
 gi|327447790|gb|EGE94444.1| polyprenyl synthetase [Propionibacterium acnes HL043PA1]
 gi|327451078|gb|EGE97732.1| polyprenyl synthetase [Propionibacterium acnes HL087PA3]
 gi|327452840|gb|EGE99494.1| polyprenyl synthetase [Propionibacterium acnes HL092PA1]
 gi|327453567|gb|EGF00222.1| polyprenyl synthetase [Propionibacterium acnes HL083PA2]
 gi|328753112|gb|EGF66728.1| polyprenyl synthetase [Propionibacterium acnes HL087PA1]
 gi|328753766|gb|EGF67382.1| polyprenyl synthetase [Propionibacterium acnes HL020PA1]
 gi|328759144|gb|EGF72760.1| polyprenyl synthetase [Propionibacterium acnes HL025PA2]
 gi|328760374|gb|EGF73943.1| putative polyprenyl synthetase [Propionibacterium acnes HL099PA1]
 gi|332675150|gb|AEE71966.1| bifunctional short chain isoprenyl diphosphate synthase
           [Propionibacterium acnes 266]
          Length = 365

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 92/248 (37%), Gaps = 28/248 (11%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT---ECASLFNVN 68
            S RI + LDD   +            +L A R    GGK++R          A+   + 
Sbjct: 18  VSARILSFLDD--EKRVIDAIGAELSPVLDAARDYTAGGKRLRPAFCYWGHAAAADQPIE 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------D 112
               L+  A++E +H  +L+HDDL  MD+   RRG P+VH ++                 
Sbjct: 76  PTGLLQAAASLEFLHVSALVHDDL--MDHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQFG 133

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              AI+ G+ LL ++ ++ +S   +      +  +L         G +            
Sbjct: 134 CDIAILLGDLLLMWSSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGS 193

Query: 173 DETQVF----MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           D          + + K     +   C+ G  +A  S   ++ +  FG  +G  FQ  DDL
Sbjct: 194 DSESALDLVGRVVEYKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDL 253

Query: 228 LDCEEDLP 235
           L    D  
Sbjct: 254 LGVFGDAE 261


>gi|62959235|gb|AAY23725.1| farnesyl diphosphate synthase [Erythrobacter sp. JL-475]
          Length = 147

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +R GKPTVH  YDE TA++AG+ L   AFEI++ P T     +RS+L+ +L    G+ GM
Sbjct: 12  LRHGKPTVHKVYDEATAVLAGDALHALAFEILADPGTCSDPFVRSELITTLGTASGMNGM 71

Query: 160 LGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GGQM+D+    +    D   +  +Q++KTGAL+  + E GAI+       +  LR +  
Sbjct: 72  AGGQMMDMVADEEGVEYDLHTITRLQQLKTGALLAASVEMGAILGRVPPEGRAHLRAYAR 131

Query: 216 NLGIIFQLADDLLDCE 231
           ++G+ FQ+ADD+LD E
Sbjct: 132 DIGLAFQIADDILDVE 147


>gi|315108190|gb|EFT80166.1| polyprenyl synthetase [Propionibacterium acnes HL030PA2]
          Length = 365

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 92/248 (37%), Gaps = 28/248 (11%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT---ECASLFNVN 68
            S R+ + LDD   +            +L A R    GGK++R          A+   + 
Sbjct: 18  VSARVLSFLDD--EKRVIDAIGAELSPVLDAARDYTAGGKRLRPAFCYWGHAAAADQPIE 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------D 112
               L+  A++E +H  +L+HDDL  MD+   RRG P+VH ++                 
Sbjct: 76  PTGLLQAAASLEFLHVSALVHDDL--MDHSDTRRGLPSVHRRFEAAHGIAHGDGPAEQFG 133

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              AI+ G+ LL ++ ++ +S   +      +  +L         G +            
Sbjct: 134 CDIAILLGDLLLMWSSQMFTSAPVKADRLAAATPLLDAMRTEVTCGQVLDVTSQSGMAGS 193

Query: 173 DETQVF----MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           D          + + K     +   C+ G  +A  S   ++ +  FG  +G  FQ  DDL
Sbjct: 194 DSESALDLVGRVVEYKCASYTVVRPCQIGVALAGGSDRLQQTMADFGSPIGRAFQYRDDL 253

Query: 228 LDCEEDLP 235
           L    D  
Sbjct: 254 LGVFGDAE 261


>gi|297564500|ref|YP_003683472.1| polyprenyl synthetase [Meiothermus silvanus DSM 9946]
 gi|296848949|gb|ADH61964.1| Polyprenyl synthetase [Meiothermus silvanus DSM 9946]
          Length = 332

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +   +L+   H        L    R    Y   GGK +R  L+              L V
Sbjct: 10  IQARMLEALPHPDQAVRAELAEYARMLRDYPERGGKMLRGMLLVYAGLAHGARLEQLLPV 69

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
            AA+E    ++LIHDD+   D    RRG+P +H  Y    A+ AG+ L    + ++   +
Sbjct: 70  AAALELFQNWALIHDDIE--DASEERRGRPALHRLYGMPLALNAGDALHARMWAMLIEAR 127

Query: 136 TQ---LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCF 191
                L + +R   + +   ++ +  M            + E    ++   K        
Sbjct: 128 ASYLVLDEFVRVVDLTAQGQHLEMSWM------QTHRFDLTEQDYLLMCAQKAAYYTAVA 181

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
               GA+ A             G NLGI FQ+ DD+L+ E D  K
Sbjct: 182 PLRLGALSAGV--EPPATYIEAGLNLGIGFQIVDDVLNLEGDPVK 224


>gi|315501045|ref|YP_004079932.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315407664|gb|ADU05781.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 384

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 27/258 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           + G L +  ++  K +D  L   L    ++ + +         +A    L GGK++R   
Sbjct: 25  VRGVLAAFTKDLIKGVDETLAAFLAAEVESLTEIDAAMGGFAATARDSVLAGGKRVRPTF 84

Query: 58  VTECAS-LFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV------- 107
                  +        + L   +A+E +H ++L+HDD+  MD    RRG PT        
Sbjct: 85  AYWGWRGVVGGEEPLCSVLPALSALELLHTFALVHDDV--MDASDTRRGLPTAHRAAAAR 142

Query: 108 ---------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                      +Y E  A++ G+  + +A  +++      +  +  +          + G
Sbjct: 143 HRAAGHTGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRCYDQMRVETVAG 202

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNE--KERLRCFGE 215
                + +         +   + + KT    +      GA +A A  ++        +G 
Sbjct: 203 QFLDVLGENDSASWTVDRALRVARYKTASYTVQRPLLFGACLAGADADDPLIAAYTRYGL 262

Query: 216 NLGIIFQLADDLLDCEED 233
            +G  FQL DDLL    D
Sbjct: 263 AVGEAFQLRDDLLGVYGD 280


>gi|268679951|ref|YP_003304382.1| polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617982|gb|ACZ12347.1| Polyprenyl synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 298

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 105/213 (49%), Gaps = 20/213 (9%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +++L+++  + +    +  LL    + +  GK++R+ L+ + A         +L++ A +
Sbjct: 5   VENLMVEMVASLGDVRSVELL----HRVPKGKRLRAKLILKIA----GVSEASLKLAAIV 56

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D+ + RRG+ +++  +   TAI+ G+ L +  F  ++    ++ 
Sbjct: 57  ELIHAASLLHDDV--IDDAFTRRGESSINALFGNKTAIMLGDILYSKGFSELTHMPQEVA 114

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             I      S    +   G L    L        ET  F +   KT +L+  + ++ A++
Sbjct: 115 FTI------SNAVALLSVGELLDVDL-SHGFNESETLYFDMIYKKTASLIEASAKAAALL 167

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +  + +       +G+NLG+ FQ+ DD+LD  +
Sbjct: 168 SGKNGDI---YALYGKNLGLAFQIIDDILDITQ 197


>gi|297190113|ref|ZP_06907511.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721176|gb|EDY65084.1| polyprenyl synthetase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 354

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 23/252 (9%)

Query: 1   MNGGLPSK--LQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSF 56
           M   +P          R+D +L   + +   H+     D   +   +R A   GK++R+ 
Sbjct: 1   MAAAMPDHPGRAAFKARVDDVLLHFVEEEIDHLLAVDGDLAPVADRLRIATNRGKRLRAA 60

Query: 57  LVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
                          AL R  AA+E +H  +++HDDL  +D+  +R G PT H+      
Sbjct: 61  FCYWGWRAAGQPDSDALVRAAAAMELVHAAAVVHDDL--IDDSPLRHGLPTAHVALRAAV 118

Query: 116 -------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                        A++ G+ L+++A ++ ++         R++ + ++     + G    
Sbjct: 119 VASPRPGAAARSLAMLVGDLLMSWAGQLFTACGLPAAYLSRARPLWAVLARELVAGECLE 178

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +        D      + + KT    +      G  +  A +  +E L  +G  LG  F
Sbjct: 179 ILRTGAHP--DTAASLKVIRYKTAKYTVEHPLHIGGALGGACEELREALSDYGLPLGEAF 236

Query: 222 QLADDLLDCEED 233
           QL DDLL    D
Sbjct: 237 QLRDDLLGLFGD 248


>gi|183983202|ref|YP_001851493.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M]
 gi|183176528|gb|ACC41638.1| polyprenyl synthetase IdsB_2 [Mycobacterium marinum M]
          Length = 345

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 10/157 (6%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H +SL+HDD+  MD    RRG+ TV   + E +AI+ G+ L      +++       
Sbjct: 94  ELMHNFSLVHDDV--MDRDVTRRGRATVWTVWGETSAIMLGDALHVLCSRVLAEMLAPEV 151

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESG 196
                  + S        G+  GQ+ D   E    +       +   KT  LM  ACE G
Sbjct: 152 AMTAIATLESSF-----LGLRVGQVDDGDFETPKRVTVDGYLRMAAGKTAGLMGCACELG 206

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A+ A A       +R FG +LG+ FQ+ DD++    D
Sbjct: 207 ALTAGADPLTVSAMREFGYHLGLAFQILDDIVGIWGD 243


>gi|315427283|dbj|BAJ48895.1| octaprenyl-diphosphate synthase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 312

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 17/226 (7%)

Query: 5   LPSKLQEN--SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           + + LQE   +  ++T+  DL  +    ++ + +  L+     A+ GGK++R  L+    
Sbjct: 1   MAASLQETDTATLVETLRHDLETRLREKIEGRPDSFLIER---AVRGGKRLRPILLLTVF 57

Query: 63  SLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                 ++  AL V  A+E  H  SL+HDD+  +D   +RRGK ++  Q     AII G+
Sbjct: 58  KTLGGTDYTKALDVAVALELAHSASLVHDDI--VDFDKVRRGKVSLWYQIGAGKAIIQGH 115

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            ++  AF I+     ++        +     +   +G+L      +    + E    ++ 
Sbjct: 116 RIINLAFNIVLDIGEEMT------RIFVEAWDRASKGIL---DEVVNKAALTERLYLLMI 166

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           + KT +L   A ++GA++A AS    + +R +G  +G ++QLADDL
Sbjct: 167 REKTASLFEAAAQAGAVLAGASPEMVQHMRRYGSEVGTVYQLADDL 212


>gi|302308079|ref|NP_984864.2| AER004Wp [Ashbya gossypii ATCC 10895]
 gi|299789285|gb|AAS52688.2| AER004Wp [Ashbya gossypii ATCC 10895]
          Length = 475

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 41/202 (20%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRGKP+ ++ +    A++AG+ LL  A   IS 
Sbjct: 181 RLAEIVEMIHTASLLHDDV--IDHSGTRRGKPSGNVAFTNKMAVLAGDFLLGRATVSISR 238

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ---GMLGG---------QMLDIQDEFIDE------- 174
            +      + S  + +L     +Q    ++ G         Q +    + I         
Sbjct: 239 LRNPEVVELVSNCIANLVEGEFMQLKNTVVDGDLETINNGTQQIPPASKTIPLPVHDYRV 298

Query: 175 ------------------TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
                                     +KT AL+  +C + A+++ A     +    FG+N
Sbjct: 299 NTTLASGISHEVMIETAFDYYLHKTYLKTAALISKSCRAAAVLSGARDPILDECYHFGKN 358

Query: 217 LGIIFQLADDLLDCE--EDLPK 236
           LGI FQL DD+LD     +L K
Sbjct: 359 LGICFQLVDDMLDFTTSGELGK 380


>gi|325000136|ref|ZP_08121248.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1]
          Length = 382

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 25/211 (11%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + L GGK++R             +         L   A++E I   +L+HDDL  MD   
Sbjct: 65  FVLGGGKRLRPTFAWWGWRGAGGDPGSDHAQAVLTAVASLELIQACALVHDDL--MDASS 122

Query: 100 IRRGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            RRG+PTVH                 ++    AI+ G+    +A ++  S       + R
Sbjct: 123 TRRGRPTVHVEFARTHAANDWSGPPARFGAAVAILVGDLAQVWADDMFHSAALPDGAHGR 182

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHA 202
           +           L G     +     +   E+    I + KT A  +      GA +A A
Sbjct: 183 AAEPWRAMRTEVLAGQYLDVLAQASGDTA-ESTALQIDRFKTAAYTVERPLHLGAAIAGA 241

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                   R +G ++G+ FQL DDLL    D
Sbjct: 242 EPQVVNAYRRYGADIGVAFQLRDDLLGVFGD 272


>gi|259047925|ref|ZP_05738326.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175]
 gi|259035422|gb|EEW36677.1| polyprenyl synthetase [Granulicatella adiacens ATCC 49175]
          Length = 325

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 25/231 (10%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLF- 65
           +L E  K++  I+ D +           N  +  AI   L  GGK +R   +   +    
Sbjct: 13  ELHEELKQVKKIMRDSIQ--------IENKAIKDAILSVLDSGGKMVRPAYLILFSMWND 64

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           N N    L + AA+E +H  +L HDD+  +D   +RRG+ T+  +     AI AG+ LLT
Sbjct: 65  NRNKEEVLAIAAALELLHVATLFHDDV--IDESSVRRGQETISAKLGNRVAIYAGDYLLT 122

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182
             ++++SS    L +              G+  ++ G++  +++ +   +         +
Sbjct: 123 VCYQLLSSYSKDLVN--------IQIPTSGMMQVIQGELSQMEERYRLDVTVQDYLKRIE 174

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT  L   +C  G   +   +    R R  G  +G+ FQ+ DD+LD E D
Sbjct: 175 GKTAQLFMLSCVMGEQFSVLKEE--ARARQIGHAIGMSFQILDDILDYEID 223


>gi|300783442|ref|YP_003763733.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32]
 gi|299792956|gb|ADJ43331.1| dimethylallyltranstransferase [Amycolatopsis mediterranei U32]
          Length = 339

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A  GGK +R  LV  CA         A+    A+E +H +SL+HDD+  MD    RR + 
Sbjct: 58  ATDGGKALRPALVLLCAEAAGGEAADAVPAAVAVELVHNFSLLHDDV--MDGDTTRRHRA 115

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T    +    A++AG+ LL+ AFE+++           +  +LS      L+G       
Sbjct: 116 TAWTVFGTGPAVLAGDALLSLAFEVLA------PSGAANAKVLSAATLALLEGQAADLDF 169

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           + +D+ +   +   + + KT AL+  AC  GA    A  +   R   FG  +G+ FQ  D
Sbjct: 170 EQRDD-VTPGECIRMAEGKTAALLGAACTLGATSGPAGAD---RFGAFGRAVGLAFQHVD 225

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 226 DLLGIWGD 233


>gi|21223617|ref|NP_629396.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|256785271|ref|ZP_05523702.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289769163|ref|ZP_06528541.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|9968700|emb|CAC05969.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|289699362|gb|EFD66791.1| polyprenyl synthetase [Streptomyces lividans TK24]
          Length = 386

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 19/230 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E    I T+ + +      H   QH D   +A       GK IR  LV   A+       
Sbjct: 63  ELRSAIATLPESMRRVALYHFGWQHADGTPAAGN----AGKAIRPALVLTAAAALGGPGA 118

Query: 71  TALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            A  V AA   E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A 
Sbjct: 119 RAAAVRAAAAVELVHNFTLLHDDV--MDRDATRRHRPTAWTVFGDADAILAGDALQALAL 176

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKM 183
            + ++          ++L         +  +  GQ  D   E      +   +  ++ + 
Sbjct: 177 RLFAADPHPASAAAATRL------ADCVMELCEGQHADTAMERRPPDEVTLDETLVMAEA 230

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  AC  GA+ A A+  + E L  FG   G+ FQL DD++    D
Sbjct: 231 KTGALLGCACAVGALYAGAATEDVEALDAFGREAGMAFQLIDDVIGIWGD 280


>gi|239992468|ref|ZP_04713132.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 11379]
          Length = 349

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A     +    +    A+E IH +SLIHDD+  MD    RR +PT+  
Sbjct: 60  GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 117

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ L   A   ++            QL         L  ++ GQ  D+  
Sbjct: 118 AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQL------AGALGDLVHGQAQDLLF 171

Query: 170 EFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           E    +        +   +   KTG+L+  A   GA +A A  +  E L   G ++G+ F
Sbjct: 172 ESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAF 231

Query: 222 QLADDLLDCEED 233
           Q  DDLL    D
Sbjct: 232 QAVDDLLGIWGD 243


>gi|317127634|ref|YP_004093916.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315472582|gb|ADU29185.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 326

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 21/229 (9%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-N 66
           +L+ N   + ++++  +      +    N+ + S       GGK +R      C+ +  +
Sbjct: 12  ELKTNLSSVLSLIESHVRVRDKTVAATINNLVHS-------GGKLLRPAYSLLCSQIGPD 64

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+ V AAIE IH  SL+HDD+  +D+   R    T+H  +    AI +G+ L   
Sbjct: 65  SEKEKAVAVAAAIEAIHMASLVHDDV--IDDADTRHNHATIHTMHGNKFAIYSGDYLFCI 122

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKM 183
           +F+I++   + L             +  G++ +L G++  +   F   +           
Sbjct: 123 SFQILAQHASSLAHL--------DFNTRGMEKILAGELDQLNSRFKPSLSVKSYLSRVAG 174

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT  L   +C SGA+   A++ +       G  +G+ FQ+ DD+LD + 
Sbjct: 175 KTAQLFAISCYSGAMEGGATRKQAMNAWNMGHYIGMTFQIMDDILDFKG 223


>gi|145346108|ref|XP_001417536.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577763|gb|ABO95829.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 332

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 33/208 (15%)

Query: 50  GKKIRS-FLVTECASLFNVNHLTA------------------------LRVGAAIECIHC 84
           GK++R   L+   +++ N    +A                         R+    E IH 
Sbjct: 26  GKRVRPTVLMLMASAMTNGVMTSAAQGGWRETDHAPAHQAPADVRRRQQRLAEIAEMIHV 85

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+HDD+  +DN   RRG   ++++     AI+AG+ LL  A   ++S +      + S
Sbjct: 86  ASLLHDDV--LDNAATRRGLRALNLEVGNKLAILAGDFLLARASVTLASLRNTEVIELLS 143

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +++  L     +Q     + L   D ++ +T        KT +L+  + ++ A++    +
Sbjct: 144 RVLEHLVAGEVMQMTAKPESLSSMDHYVKKTYY------KTASLIANSSKAIALLGGHGE 197

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
              +    +G+NLG+ FQ  DD+LD   
Sbjct: 198 ESAQLAYDYGKNLGLAFQFQDDVLDFIG 225


>gi|73671769|gb|AAZ80290.1| farnesyl diphosphate synthase [Vibrio sp. JL-73]
          Length = 147

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 4/147 (2%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI-RSQLM 147
           HDDLP MD+  +RRG+ T HI +DE +AI+AG+ L T AF I++  K   + +I R  ++
Sbjct: 1   HDDLPGMDDDSLRRGQATCHIAFDEASAILAGDALQTLAFGILAEGKLSAEGDIYRIHMV 60

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQ- 204
             L    G  GM  GQ LD+  E   +D   +  I + KTGAL+  A   GA  A     
Sbjct: 61  KELAAASGAMGMCLGQALDLAAEGKRVDLEALETIHRNKTGALIRCAVRLGAYAAGEKGV 120

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
              +RL  F   +G+ FQ+ DD+LD E
Sbjct: 121 ACLKRLDTFSNAIGLAFQVQDDILDVE 147


>gi|157127995|ref|XP_001661265.1| trans-prenyltransferase [Aedes aegypti]
 gi|108882325|gb|EAT46550.1| trans-prenyltransferase [Aedes aegypti]
          Length = 249

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 8/153 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D  + RRGKP+V++ ++      AG+ +L  A  +++  K    
Sbjct: 4   EMIHTASLVHDDV--IDQSFARRGKPSVNVIWNHKKVTQAGDYVLAVASMLLARLKHDEV 61

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            +I SQ++  L     +      Q+   + E       F     KT +L+  + ++ A++
Sbjct: 62  THILSQVLTDLVQGEFM------QLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVL 115

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + A +   E    +G NLG+ FQ  DDLLD   
Sbjct: 116 SGADEQMVELSFQYGRNLGLAFQFVDDLLDFVS 148


>gi|225872538|ref|YP_002753993.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196]
 gi|225793159|gb|ACO33249.1| farnesyltranstransferase [Acidobacterium capsulatum ATCC 51196]
          Length = 307

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 14/242 (5%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           M   +P+ +    +         L +++   +     RL  A++  L   G  IR+ L  
Sbjct: 1   MTVAVPASIALRLRD--------LYRSSCSPKADTESRLAGALQEVLQHPGNMIRAELAF 52

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                +++    +  +  A+E  H  SL+ DDLP MD+  +RRG   +H  Y E  AI+ 
Sbjct: 53  RLGRSYDLPGACSEHLAIAVEYFHTASLLFDDLPCMDDATLRRGAACIHHTYGEGAAILT 112

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQV 177
              L+ +A+ ++           R++ +  + H +GL G+L GQ  D  +++        
Sbjct: 113 ALALVNHAYGLLWKGVAHSSAEARTRTLEYVEHQLGLAGLLNGQSRDLHMREASRQPRIY 172

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDL 234
             I   KT +L+  A    AI   A + E+  L       G+ +Q+ DDL D     +D 
Sbjct: 173 QQIAIGKTVSLIRMALVVPAIAGGAGEYEQCLLDRLAIAWGLSYQILDDLKDVLHTAKDS 232

Query: 235 PK 236
            K
Sbjct: 233 GK 234


>gi|154249013|ref|YP_001409838.1| polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154152949|gb|ABS60181.1| Polyprenyl synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 341

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 30/248 (12%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECA 62
            L   +Q+  ++I+T+ ++L       +  ++   L+     + L  GK++R  L+    
Sbjct: 2   ELNHYIQKIDEKIETLCEEL-----KKIAPENLKELIENFNEFTLRPGKRVRPLLLLLSY 56

Query: 63  SLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------D 112
           + +   N   A+   AAIE +H + L+HDD+  +DN  +RRGKPT+H  Y          
Sbjct: 57  NGYKGKNMDDAITFAAAIEIMHSFLLVHDDI--IDNADLRRGKPTLHKTYEKSYNSSKLG 114

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD------ 166
              AI+ G+ +  Y F I+S  K  + ++   +++ + +      G   GQ+LD      
Sbjct: 115 TDLAIVVGDIVAFYIFGILSELK--VSESTLKKIVKNFSKCYVNTG--FGQLLDILYAGR 170

Query: 167 IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCF-GENLGIIFQLA 224
           I D+ ++E     I ++KT      +    G  ++  +  ++E      G+N GI FQ  
Sbjct: 171 IDDKIVNEDIPEKISELKTAYYTFVYPMLFGYYLSENNIEKEEEKILIVGKNAGIAFQYR 230

Query: 225 DDLLDCEE 232
           DD++    
Sbjct: 231 DDIIGIFG 238


>gi|282865630|ref|ZP_06274681.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282559674|gb|EFB65225.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 358

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 4/186 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A L     ++A+    A+E +H +SL+HDD+  MD   +RR +P V  
Sbjct: 68  GKGVRQALAVLGAELCGAPGVSAVPGAVAVELVHAFSLVHDDI--MDGDELRRQRPAVWK 125

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQL--KDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            Y    A++AG+GLL  A + ++     L     +R    L+         +L       
Sbjct: 126 SYGTGPAVLAGDGLLAAAVQTLAQAPGALGGPAVLRLSGALTSLVRGQADDLLFADRPWT 185

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             E +       + + KTGAL+  A   GA++  A       L   G +LG+ FQ  DDL
Sbjct: 186 GPEAVRPDAYRSMAEHKTGALLGCAAALGALLGGAPDTTVTALDRAGRHLGVAFQAVDDL 245

Query: 228 LDCEED 233
           L    D
Sbjct: 246 LGIWGD 251


>gi|146417731|ref|XP_001484833.1| hypothetical protein PGUG_02562 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 475

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 75/205 (36%), Gaps = 38/205 (18%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N       R+   +E IH  SL+HDD+  +D    RRG+P+ ++ +    A++AG+ L
Sbjct: 172 ASNGILPKQRRLAEIVEMIHTASLLHDDV--IDMSDARRGRPSGNVAFTNKMAVLAGDFL 229

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL--------------------------- 156
           L  A   I+  +      + S  + +L     +                           
Sbjct: 230 LGRASVAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVLNQSSDINNGGELKPVPTPTG 289

Query: 157 -----QGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
                Q     Q     D   +             +KT +LM     + A+++ A  +  
Sbjct: 290 KVPTKQHEYSVQTPADVDHETNVNAAFEYYLHKTYLKTASLMSKLARAAAVLSGAQDDVV 349

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
           +    FG NLG+ FQ+ DD+LD   
Sbjct: 350 QNCYDFGRNLGLCFQIVDDMLDYTS 374


>gi|256390769|ref|YP_003112333.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256356995|gb|ACU70492.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 367

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 91/249 (36%), Gaps = 30/249 (12%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
             R+D  L   L    + +     +   L +A+R  L GGK +R             +  
Sbjct: 14  RTRVDAALSAFLDSQGAALIAMSPELAPLPTALREFLDGGKLMRPGFCYWGWRGVLGDSA 73

Query: 71  TA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------- 111
           TA      +   A++E +   +LIHDD   MD+   RRG P +H ++             
Sbjct: 74  TAQEEEGIVHAAASLELLQASALIHDD--YMDDSDTRRGMPAIHRRFAAAHREAAWEGSD 131

Query: 112 ---DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM---LGGQML 165
                  AI+ G+  LT+  E+ +      +    ++    +     + G    +  Q  
Sbjct: 132 ERFGAAAAILLGDVCLTWCDEMFAGNGLPAERTAAARRYFDVMRTEVMAGQYLDVLAQAH 191

Query: 166 DIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            + +      +   + + K+    +      GA++A   ++       +G  LG  FQL 
Sbjct: 192 GLDEPERAAQRAQTVIRFKSAKYTIERPLHVGAMLAGGGKDVIAAYSAYGLPLGEAFQLR 251

Query: 225 DDLLDCEED 233
           DD+L    D
Sbjct: 252 DDVLGVFGD 260


>gi|302864751|ref|YP_003833388.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302567610|gb|ADL43812.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 384

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 27/258 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           + G L +  ++  K +D  L   L    ++ + +         +A    L GGK++R   
Sbjct: 25  VRGVLAAFTKDLIKGVDETLAAFLAAEVESLTEIDAAMGGFATTARDCVLAGGKRVRPTF 84

Query: 58  VTECAS-LFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV------- 107
                  +        + L   +A+E +H ++L+HDD+  MD    RRG PT        
Sbjct: 85  AYWGWRGVVGGEEPLCSVLPALSALELLHTFALVHDDV--MDASDTRRGLPTAHRAAAAR 142

Query: 108 ---------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                      +Y E  A++ G+  + +A  +++      +  +  +          + G
Sbjct: 143 HRAAGHTGDPDRYGEAVAVLIGDLCMVWADRLMAHAAVPAERLLDVRRCYDQMRVETVAG 202

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNE--KERLRCFGE 215
                + +         +   + + KT    +      GA +A A  ++        +G 
Sbjct: 203 QFLDVLGENDSASWTVDRALRVARYKTASYTVQRPLLFGACLAGADADDPLIAAYTRYGL 262

Query: 216 NLGIIFQLADDLLDCEED 233
            +G  FQL DDLL    D
Sbjct: 263 AVGEAFQLRDDLLGVYGD 280


>gi|332297374|ref|YP_004439296.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168]
 gi|332180477|gb|AEE16165.1| Polyprenyl synthetase [Treponema brennaborense DSM 12168]
          Length = 348

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 25/246 (10%)

Query: 13  SKRIDTILDDLLLQTASH-------------MQTQHNDRLLSAIRYAL-LGGKKIRSFLV 58
            ++I+++L   L                   +  +H ++L S     L LGGK+ R  L+
Sbjct: 9   LQKIESVLQKNLPDAPGAGWNENIFGTLPGCVTEKHIEQLSSPCAALLKLGGKRWRPLLL 68

Query: 59  TECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           T CA+       +   A  +   +E +H  SLIHDD+   D    RRG P  HI +   T
Sbjct: 69  TLCAAAAAGTEESPEAAYEITPLVEFVHTASLIHDDIE--DCADTRRGMPAAHITWGIDT 126

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--- 172
           AI AG+ L   A   +++    L    +  L       +    +     +    +     
Sbjct: 127 AINAGSWLYFTAAACLTN--VPLPAERKLALYRLYAEELRRLHLGQAMDIAWHKDNTALP 184

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC-E 231
              +   + +MKTG L   A ++G ++   +  ++  +     ++G+ FQ+ DD+L+   
Sbjct: 185 SVQEYEAMVRMKTGTLAALAAKAGTLVGGGTAEQESVMGNAAADIGVGFQILDDVLNLTT 244

Query: 232 EDLPKK 237
            ++ KK
Sbjct: 245 GNIGKK 250


>gi|291449452|ref|ZP_06588842.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291352399|gb|EFE79303.1| polyprenyl diphosphate synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 348

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A     +    +    A+E IH +SLIHDD+  MD    RR +PT+  
Sbjct: 59  GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 116

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ L   A   ++            QL         L  ++ GQ  D+  
Sbjct: 117 AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQL------AGALGDLVHGQAQDLLF 170

Query: 170 EFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           E    +        +   +   KTG+L+  A   GA +A A  +  E L   G ++G+ F
Sbjct: 171 ESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAF 230

Query: 222 QLADDLLDCEED 233
           Q  DDLL    D
Sbjct: 231 QAVDDLLGIWGD 242


>gi|119094186|gb|ABL61008.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured marine
           bacterium HF10_25F10]
          Length = 341

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 10/220 (4%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           SK    I+ D +L+    M         +A+ +    GK +R+ +    A L  V+   A
Sbjct: 22  SKSTSEIIHDFILE---RMPAPGQTLADAAMHHFAAPGKMLRAKMALRAADLLKVDRPAA 78

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L   AAIE +H  SL+HDD+   D   +RRG+P V  ++    A+  G+ L+  +FE+ +
Sbjct: 79  LHWAAAIEVLHNASLVHDDIC--DGDQLRRGRPAVWSKFGRDVALTLGDWLIALSFELAA 136

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
               + +  +  +++ +          +G           D          KT  L+   
Sbjct: 137 EAAQRAQTPMLLKILATHMKTT----TVGEAHEFDPAPVTDWDHYLQGAGDKTAPLLTAP 192

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E  A MA           CF  +LG  +Q+ +D+L+   
Sbjct: 193 LEGIAAMALHGGAAPTIGACF-RSLGNAYQIGNDILNFSG 231


>gi|78777056|ref|YP_393371.1| polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497596|gb|ABB44136.1| Polyprenyl synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 295

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 28/224 (12%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           +R+D+ +  L+ +      T   ++L         GGK++R+ L+ + A        TA 
Sbjct: 2   QRVDSEITRLIKEIDYDEVTNLFNKL--------QGGKRLRAGLILKIAPTC----TTAP 49

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +GA +E IH  SL+HDD+  +D   +RRG  +++      TA++ G+ L + AF  + +
Sbjct: 50  LLGAIVELIHAASLLHDDV--IDEATLRRGVASINATDGSKTAVMLGDILYSKAFSELVA 107

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
              ++     ++++ S    +    M+  +M    +   DE +   +  +KT  L+    
Sbjct: 108 FDKEI-----AKVISSSVTALSKGEMMDVKMASAFNS--DEERYLEMLYLKTATLIEACA 160

Query: 194 ESGAIMAHASQNEKERLRC--FGENLGIIFQLADDLLDCEEDLP 235
            +      A   +K+ L    +G+NLG+ FQ+ DD+LD   D  
Sbjct: 161 HA-----AALLAQKDALSHSIYGKNLGLSFQIIDDILDITSDEA 199


>gi|118586922|ref|ZP_01544355.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni
           ATCC BAA-1163]
 gi|118432649|gb|EAV39382.1| trans-hexaprenyltranstransferase, component II [Oenococcus oeni
           ATCC BAA-1163]
          Length = 325

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 7/183 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R   +   +     +    + + AAIE +H  +LIHDD+  +D    RRG  ++ 
Sbjct: 46  GGKLLRPAYLLLFSMFQKTDRNKIIALAAAIEILHMATLIHDDV--IDESPTRRGMSSIQ 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+ + TA+ +G+ L    F +++   +      R         N  L G +  QM++  
Sbjct: 104 KQFGQSTAVYSGDYLFVVCFNLLAEYASDF----RGIQQYGHHMNAILNGEMT-QMVERY 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I   Q F     KTG L   A   GA  +       +     G N+G+ FQL DD+L
Sbjct: 159 DLNISIDQYFKQISGKTGQLFSLATFLGAYESGNKIKFAKNAEKIGLNIGVSFQLMDDIL 218

Query: 229 DCE 231
           D  
Sbjct: 219 DYT 221


>gi|300784232|ref|YP_003764523.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei
           U32]
 gi|299793746|gb|ADJ44121.1| geranylgeranyl pyrophosphate synthase [Amycolatopsis mediterranei
           U32]
          Length = 363

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 36/261 (13%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIR-YALLGGKKIRSFL 57
           MN   P+   +    ++  L   L +  + +          + A+R + L GGK++R   
Sbjct: 1   MNA--PAADTDLPAHVERALAGFLDRAGTAILGTEPTVAAGIDALRGFVLGGGKRLRPTF 58

Query: 58  VTECASLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH---- 108
                     +         L+  A++E I   +LIHDDL  +D+   RRG PTVH    
Sbjct: 59  AWWGWRGAGGDPAGPDAEGVLQAVASLELIQACALIHDDL--IDSSDSRRGNPTVHIAGA 116

Query: 109 ------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
                         +   TA++ G+  L +A ++ +      +    ++           
Sbjct: 117 KLHADRGWLGSPATFGLATAVLVGDLALAWADDMFADADLPAETLAAAR----PAWRAMR 172

Query: 157 QGMLGGQMLDIQDEFIDETQVFM---IQKMKTGALMC-FACESGAIMAHASQNEKERLRC 212
             +L GQ LD++ +   +  V     I ++KT A         GA +  A+      L  
Sbjct: 173 TEVLAGQYLDVRTQATGDASVEAALKIDRLKTAAYTVQRPLHLGAALGGAAPELIATLLE 232

Query: 213 FGENLGIIFQLADDLLDCEED 233
           FG  +G+ FQL DDLL    D
Sbjct: 233 FGGEVGVAFQLRDDLLGVFGD 253


>gi|297158616|gb|ADI08328.1| putative polyprenyl diphosphate synthase [Streptomyces
           bingchenggensis BCW-1]
          Length = 379

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A        TA+    A+E IH +SL+HDD+  MD    RR + +V  
Sbjct: 83  GKGVRQALAVLGAEAAGAPGTTAVAGAVAVELIHAFSLLHDDI--MDGDETRRRRASVWK 140

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ L   A + ++            QL      +  L  ++ GQ  D+  
Sbjct: 141 AYGTGPAVLAGDALFALAVQTLAESPGPHGGAAIRQL------SGALGDLVRGQAEDLLF 194

Query: 170 EFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           E    T        +   + + KTGAL+  A   GA +A A +     L   G ++G+ F
Sbjct: 195 ESRPWTGPDAVRTAEYRAMAEGKTGALLGCAAALGAQLAGAPEPVVAALDRAGRHVGVAF 254

Query: 222 QLADDLLDCEED 233
           Q  DDLL    D
Sbjct: 255 QAVDDLLGIWGD 266


>gi|18447424|gb|AAL68276.1| RE18374p [Drosophila melanogaster]
          Length = 245

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+HDD+  +D    RRGKP+V+  ++     +AG+ +L+ A  +I+  ++    
Sbjct: 1   MVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVT 58

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + SQ++  L     +      Q+   + E             KT +L+  A ++ A++A
Sbjct: 59  IVLSQILTDLVQGEFM------QLGSRETENERFAHYLTKTYRKTASLIANALKATAVIA 112

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A  N  E    +G N+G+ FQL DD+LD   
Sbjct: 113 QADDNVAEVAFQYGRNIGLAFQLVDDMLDFVS 144


>gi|254444809|ref|ZP_05058285.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
 gi|198259117|gb|EDY83425.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
           DG1235]
          Length = 305

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 3/210 (1%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+   ++       L  A  +AL   G   R+ +      + +++   A  +GA+IE  H
Sbjct: 16  LKRYVNLPDGLESTLFEAASHALEAEGSFSRANIAIGAGEILDMDTSRAEAIGASIELFH 75

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SLI DDLP MD+  +RR K   H  Y E  AI+A  G +  A+ ++    +++    +
Sbjct: 76  LASLILDDLPCMDDASMRRSKECAHSVYGEGAAILAALGFINRAYSLLWDLFSEVGKEQQ 135

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAH 201
            +    +   +G  G+L GQ  DI  E       +V  I   KTG+L+       AI++ 
Sbjct: 136 LEAADLVNDCLGFSGILDGQSRDIHFEDSAGLGAEVRQIASQKTGSLIRLCLLLPAILSS 195

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           AS+ +K  L    +  GI +Q+ADDL D  
Sbjct: 196 ASRYDKMHLTRLAQYWGIAYQVADDLKDIY 225


>gi|256394108|ref|YP_003115672.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256360334|gb|ACU73831.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 346

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IR  L    A     +   A+ V  A+E +H +SL+HDD+  MD    RR +PT  
Sbjct: 61  PGKAIRPALTLLTARAVGGSAEAAVPVAVAVELVHNFSLLHDDV--MDADLTRRHRPTAW 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  A  +++     + D   ++ + +         +  GQ  D+ 
Sbjct: 119 SVFGISQAILAGDALLAVANRLLAQEPAPVCDRG-AEWIGTC-----CVELCAGQWSDMD 172

Query: 169 DE---FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E    +  ++V  +   KTGAL+  AC  GA+    +     RL  FG  LG+ FQ  D
Sbjct: 173 FEQRADVSVSEVLAMAAGKTGALLGCACALGALAGGGTPAAAGRLDAFGRKLGLAFQYVD 232

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 233 DLLGIWGD 240


>gi|302688307|ref|XP_003033833.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8]
 gi|300107528|gb|EFI98930.1| hypothetical protein SCHCODRAFT_233425 [Schizophyllum commune H4-8]
          Length = 382

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 26/244 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   L   +QE     +T + DL         T  N+ L    +Y A    K +R  L+ 
Sbjct: 49  MQDKLGRYIQEMR---ETFIQDL---------TTSNELLTEISQYYAKRPSKLMRPRLIL 96

Query: 60  ECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
             A   N +          +R+   +E IH  SL+HDD+  +D    RRG  +   +Y  
Sbjct: 97  LTALAVNASVGERDALPQQVRLAEVVEMIHVVSLLHDDV--IDESDTRRGDMSAPARYGN 154

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             +I+AG+ +L  A  +I++          + ++ +L     +Q      + D       
Sbjct: 155 KNSILAGDFVLGRAMSLIATLGHFDAMREIAGVVTTLVEGEIIQAEDSIALSDKARAGQA 214

Query: 174 ETQ---VFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGENLGIIFQLADDLL 228
             Q         +KTG+L   A  S A+++    +++  L    +G  LG+ FQ+ DD L
Sbjct: 215 ADQWGSYMERIFLKTGSLFARALRSTAMLSGLPSDDERVLAVGDYGTELGLAFQIIDDAL 274

Query: 229 DCEE 232
           D +E
Sbjct: 275 DFKE 278


>gi|256372659|ref|YP_003110483.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009243|gb|ACU54810.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 338

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 19/207 (9%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTEC----ASLFNVNHLTALRVGAAIECIHCYSLI 88
           T   D   +A+   + GGK++R  +          +        +R   A+E +H  SL 
Sbjct: 29  TTDPDITAAALHLIMAGGKRVRPLIALATALALGEVAPSPDDPVVRGAVAVELVHLASLY 88

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  MD    RRG  + + ++  + A++ G+ LL  A  I +    ++   +   L  
Sbjct: 89  HDDV--MDEASERRGVSSANARFGNLIAVVTGDFLLARAAGIAARLGEEVAAALADTLAA 146

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
                     M  GQ+L++ D         +       KT +LM  A    AI+    Q 
Sbjct: 147 ----------MCEGQILEVADAHQLTRTTERYLATIAGKTASLMGTAARIPAIVLGRDQA 196

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
             + L   G  LG++FQL DD+LD   
Sbjct: 197 MLDALSAAGTALGMLFQLRDDVLDLVA 223


>gi|239946000|ref|ZP_04697937.1| putative polyprenyl diphosphate synthase [Streptomyces roseosporus
           NRRL 15998]
          Length = 323

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A     +    +    A+E IH +SLIHDD+  MD    RR +PT+  
Sbjct: 34  GKGVRQALTVLGAEAAGGSGEDGVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 91

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ L   A   ++            QL         L  ++ GQ  D+  
Sbjct: 92  AYGTGPAVLAGDALFALAVSTLADAPGPGGPAAVRQL------AGALGDLVHGQAQDLLF 145

Query: 170 EFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           E    +        +   +   KTG+L+  A   GA +A A  +  E L   G ++G+ F
Sbjct: 146 ESRPWSGPGAVLPHEYRAMATHKTGSLLGCAAALGAALAGAPASTVEALDLAGRHVGVAF 205

Query: 222 QLADDLLDCEED 233
           Q  DDLL    D
Sbjct: 206 QAVDDLLGIWGD 217


>gi|302689483|ref|XP_003034421.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8]
 gi|300108116|gb|EFI99518.1| hypothetical protein SCHCODRAFT_106878 [Schizophyllum commune H4-8]
          Length = 382

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 13/199 (6%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           YA    K +R  L+   A   N +          +R+   +E IH  SL+HDD+  +D  
Sbjct: 82  YAKRPSKLMRPRLILLTALAVNASVGERDALPQQVRLAEIVEMIHVVSLLHDDV--IDES 139

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG  +   ++    +I+AG+ +L  A  +I++ +        + ++ +L     +Q 
Sbjct: 140 DTRRGDLSAPSKFGNKNSILAGDFVLGRAMSLIAALENFDAMREIAGVVTTLVEGEIIQA 199

Query: 159 M---LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CF 213
                 G+   +               +KTG+L   A  S A+++    +++  L    +
Sbjct: 200 EDSIALGEKAKVGQAADQWGSYMERIFLKTGSLFARALRSTAMLSGLPSDDERVLAVGDY 259

Query: 214 GENLGIIFQLADDLLDCEE 232
           G  LG+ FQ+ DD LD +E
Sbjct: 260 GTELGLAFQIIDDALDFKE 278


>gi|126666905|ref|ZP_01737881.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17]
 gi|126628621|gb|EAZ99242.1| putative polyprenyl diphosphate synthase [Marinobacter sp. ELB17]
          Length = 344

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 6/191 (3%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G  +R+ L       F  +   A+   A  E IH  SL+HDDL  +D   +RRG+ TV  
Sbjct: 66  GSLLRARLALASCRSFECSQEYAVVAAACCELIHNASLVHDDL--LDGDQLRRGQATVWK 123

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           ++    A+ AG+ LL  AF + +      +  + +Q + ++T  + +   +    ++   
Sbjct: 124 RHGRGVALCAGDLLLCTAFAVSAGLDDAQQSRLLTQYLAAMTGRVIVGQSIEIAPVEPGV 183

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +      +   Q  KT  L+     +GAI A A  +  + ++ F E +G+ +Q+ DDL D
Sbjct: 184 QPRFRAYIEAAQA-KTVPLIQLPLMTGAIAAKAELSVLDSIKRFAEAVGLAYQIIDDLDD 242

Query: 230 CEE---DLPKK 237
             E   DL  K
Sbjct: 243 LVEPKADLKSK 253


>gi|15790986|ref|NP_280810.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp.
           NRC-1]
 gi|169236734|ref|YP_001689934.1| multifunctional long-chain (E)-prenyl diphosphate synthase
           [Halobacterium salinarum R1]
 gi|10581569|gb|AAG20290.1| putative isopentenyl pyrophosphate isomerase [Halobacterium sp.
           NRC-1]
 gi|167727800|emb|CAP14588.1| putative multifunctional long-chain (E)-prenyl diphosphate synthase
           [Halobacterium salinarum R1]
          Length = 300

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 94/241 (39%), Gaps = 34/241 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVN---- 68
           + ++     +  +    +       L   + +  L GGK++R  L               
Sbjct: 2   EYVEARRAAIEQRITEAVGGVEPTELGDQLEHVVLAGGKRVRPTLTVLVCEAAGGAVWTG 61

Query: 69  ----------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                              AL     +E +H  SL+ DD+  +D   +RRG  +   +Y 
Sbjct: 62  AAEAAAVRENAALSAGGEDALDYAVGVELVHNASLVVDDI--IDRSELRRGSASAWAEYG 119

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
               I+A +GLL  AF + S        + R+   ++ +    L  +  G+ +++     
Sbjct: 120 YGPGIVASDGLLGEAFALFSR-------DPRAMECVTDS----LVELGEGEAIELVARPE 168

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E +   + + KTGAL   A E GAI A A     ER   + E +G+ FQ+ DD+LD   
Sbjct: 169 TEREYMELARRKTGALFRAAAELGAIAADADGRAVERFGEYAERVGVAFQIRDDVLDATA 228

Query: 233 D 233
           D
Sbjct: 229 D 229


>gi|260203719|ref|ZP_05771210.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           K85]
 gi|289573154|ref|ZP_06453381.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           K85]
 gi|289537585|gb|EFD42163.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           K85]
          Length = 335

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 21/194 (10%)

Query: 41  SAIRYALL-----GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPS 94
             +  +LL     GGK+ R       A +    +       GA IE IH  +L HDD+  
Sbjct: 42  EVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV-- 99

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD   +RRG P+ + Q+    AI+AG+ LL  A  +++    +    I            
Sbjct: 100 MDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPEAVRII----------AD 149

Query: 155 GLQGMLGGQMLDIQ--DEFID-ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            +  ++ GQM + +   E +D   Q   + + KTG+L+  A   G + + A+  + ERL 
Sbjct: 150 TVAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLS 209

Query: 212 CFGENLGIIFQLAD 225
             G  +G  FQ+AD
Sbjct: 210 RLGGVVGTAFQIAD 223


>gi|218294741|ref|ZP_03495595.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
 gi|218244649|gb|EED11173.1| Polyprenyl synthetase [Thermus aquaticus Y51MC23]
          Length = 330

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 77/205 (37%), Gaps = 8/205 (3%)

Query: 35  HNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           H D L   +   Y   GGK +R  L    A         AL  G  +E    + LIHDD+
Sbjct: 22  HPDPLYQELLQDYPRRGGKMLRGLLTYYSALAHGAPEEAALLAGEGLELFQNWVLIHDDI 81

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--PKTQLKDNIRSQLMLSL 150
              D    RRG+P +H  +    A+ AG+ L    + +++    +  L   +  +    +
Sbjct: 82  E--DGSEERRGRPALHRLHPMPLALNAGDALHGEMWGLLAEGVARGSLSPEVLLEFHQVV 139

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                 Q +     L  + +   E  + M+               GA++A  + +     
Sbjct: 140 RRTAYGQHLDLLWTLTGRLDLTPEDYLRMVAHKAAYYTAVAPLRLGALLAGNTPHPL--Y 197

Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
              G  LG  FQ+ DD+L+ E D  
Sbjct: 198 EEAGLKLGTAFQIVDDVLNLEGDEA 222


>gi|116491107|ref|YP_810651.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
 gi|290890612|ref|ZP_06553683.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429]
 gi|116091832|gb|ABJ56986.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
 gi|290479740|gb|EFD88393.1| hypothetical protein AWRIB429_1073 [Oenococcus oeni AWRIB429]
          Length = 325

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 7/183 (3%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R   +   +     +    + + AAIE +H  +LIHDD+  +D    RRG  ++ 
Sbjct: 46  GGKLLRPAYLLLFSMFQKTDRNKIIALAAAIEILHMATLIHDDV--IDESPTRRGMSSIQ 103

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Q+ + TA+ +G+ L    F +++   +      R         N  L G +  QM++  
Sbjct: 104 KQFGQSTAVYSGDYLFVVCFNLLAEYASDF----RGIQQYGHHMNAILNGEMT-QMVERY 158

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           D  I   Q F     KTG L   A   GA  +       +     G N+G+ FQL DD+L
Sbjct: 159 DLNISIDQYFKQISGKTGQLFSLATFLGAYESGNKIKFAKNAEKIGLNIGVSFQLMDDIL 218

Query: 229 DCE 231
           D  
Sbjct: 219 DYT 221


>gi|15607702|ref|NP_215076.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv]
 gi|15839960|ref|NP_334997.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31791744|ref|NP_854237.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97]
 gi|121636480|ref|YP_976703.1| putative polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148660331|ref|YP_001281854.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
           tuberculosis H37Ra]
 gi|148821763|ref|YP_001286517.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           F11]
 gi|167968365|ref|ZP_02550642.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           H37Ra]
 gi|215402328|ref|ZP_03414509.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           02_1987]
 gi|215410099|ref|ZP_03418907.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425797|ref|ZP_03423716.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T92]
 gi|215444672|ref|ZP_03431424.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T85]
 gi|218752200|ref|ZP_03530996.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           GM 1503]
 gi|219556398|ref|ZP_03535474.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T17]
 gi|224988952|ref|YP_002643639.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797494|ref|YP_003030495.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 1435]
 gi|254230904|ref|ZP_04924231.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           C]
 gi|254363521|ref|ZP_04979567.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254549517|ref|ZP_05139964.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185436|ref|ZP_05762910.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199565|ref|ZP_05767056.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T46]
 gi|289441947|ref|ZP_06431691.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T46]
 gi|289446109|ref|ZP_06435853.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552814|ref|ZP_06442024.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 605]
 gi|289568490|ref|ZP_06448717.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T17]
 gi|289744275|ref|ZP_06503653.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis
           02_1987]
 gi|289749061|ref|ZP_06508439.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T92]
 gi|289756639|ref|ZP_06516017.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T85]
 gi|289760681|ref|ZP_06520059.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           GM 1503]
 gi|294996072|ref|ZP_06801763.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           210]
 gi|297633052|ref|ZP_06950832.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 4207]
 gi|297730029|ref|ZP_06959147.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN R506]
 gi|298524050|ref|ZP_07011459.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774666|ref|ZP_07413003.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu001]
 gi|306779417|ref|ZP_07417754.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu002]
 gi|306783203|ref|ZP_07421525.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu003]
 gi|306787573|ref|ZP_07425895.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu004]
 gi|306792123|ref|ZP_07430425.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu005]
 gi|306796310|ref|ZP_07434612.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu006]
 gi|306802169|ref|ZP_07438837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu008]
 gi|306806378|ref|ZP_07443046.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu007]
 gi|306966577|ref|ZP_07479238.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu009]
 gi|306970770|ref|ZP_07483431.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu010]
 gi|307078494|ref|ZP_07487664.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu011]
 gi|307083056|ref|ZP_07492169.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu012]
 gi|313657357|ref|ZP_07814237.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN V2475]
 gi|2114024|emb|CAB08957.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL
           PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis
           H37Rv]
 gi|13880100|gb|AAK44811.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31617330|emb|CAD93439.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL
           PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis
           AF2122/97]
 gi|121492127|emb|CAL70592.1| Probable polyprenyl-diphosphate synthase grcC1 [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124599963|gb|EAY58973.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           C]
 gi|134149035|gb|EBA41080.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148504483|gb|ABQ72292.1| putative polyprenyl-diphosphate synthase GrcC1 [Mycobacterium
           tuberculosis H37Ra]
 gi|148720290|gb|ABR04915.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           F11]
 gi|224772065|dbj|BAH24871.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318997|gb|ACT23600.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414866|gb|EFD12106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T46]
 gi|289419067|gb|EFD16268.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437446|gb|EFD19939.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 605]
 gi|289542244|gb|EFD45892.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T17]
 gi|289684803|gb|EFD52291.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis
           02_1987]
 gi|289689648|gb|EFD57077.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T92]
 gi|289708187|gb|EFD72203.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           GM 1503]
 gi|289712203|gb|EFD76215.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           T85]
 gi|298493844|gb|EFI29138.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216772|gb|EFO76171.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu001]
 gi|308327631|gb|EFP16482.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu002]
 gi|308331986|gb|EFP20837.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu003]
 gi|308335773|gb|EFP24624.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu004]
 gi|308339379|gb|EFP28230.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu005]
 gi|308343255|gb|EFP32106.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu006]
 gi|308347147|gb|EFP35998.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu007]
 gi|308351062|gb|EFP39913.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu008]
 gi|308355721|gb|EFP44572.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu009]
 gi|308359676|gb|EFP48527.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu010]
 gi|308363581|gb|EFP52432.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu011]
 gi|308367217|gb|EFP56068.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           SUMu012]
 gi|323721036|gb|EGB30100.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902391|gb|EGE49324.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           W-148]
 gi|328457279|gb|AEB02702.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           KZN 4207]
          Length = 335

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 15/191 (7%)

Query: 41  SAIRYALL-----GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPS 94
             +  +LL     GGK+ R       A +    +       GA IE IH  +L HDD+  
Sbjct: 42  EVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV-- 99

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD   +RRG P+ + Q+    AI+AG+ LL  A  +++    +      +  +++ T   
Sbjct: 100 MDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPE------AVRIIADTFAQ 153

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            + G +       ++      Q   + + KTG+L+  A   G + + A+  + ERL   G
Sbjct: 154 LVTGQMRETRGTSENVD-SIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLG 212

Query: 215 ENLGIIFQLAD 225
             +G  FQ+AD
Sbjct: 213 GVVGTAFQIAD 223


>gi|21955862|emb|CAD42868.1| solanesyl pyrophosphate synthase [Mucor circinelloides f.
           lusitanicus]
          Length = 471

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 104/290 (35%), Gaps = 72/290 (24%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           ++ + +K +   L ++    +  + + H      A  Y    GK +R  LV   A   ++
Sbjct: 99  RIIDPAKLVGDDLKEIKANISKLLGSGHPFLNTVARHYFSGEGKHVRPLLVLLIAQATSI 158

Query: 68  NHLTAL------------------------------------------------RVGAAI 79
               +L                                                R+    
Sbjct: 159 ADKKSLASNIDYKSIDTPISHGLKNITTNDVFDRKLHYTPSVTDQGCIILPTQRRLAEIS 218

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D    RR  P+ +  +    A++ G+        +++     L 
Sbjct: 219 EMIHTASLLHDDV--IDASMTRRNLPSANASFGNKMAVLGGDF-------LLARASLALA 269

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----------TQVFMIQKMKTGALM 189
               ++ +  +   I    ++ G+ + +++    E                  MKTG+L+
Sbjct: 270 RLRNAECIELMATCIA--NLVEGEFMQLRNTKEGESGKVKKLSTFDHYMEKTYMKTGSLI 327

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
             +C++ A++  +++        FG+NLG+ FQL DD+LD      +L K
Sbjct: 328 AQSCKASAVLGGSTKEVANIAYDFGKNLGLAFQLVDDMLDFTVTAAELGK 377


>gi|291060049|gb|ADD72784.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 377

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 44/261 (16%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL----------GGK 51
           NG +   L +  + I+  L D L    +        R+L++    +L          GGK
Sbjct: 11  NGTMKRALAQRLRNIERALADALPAQPTRSWMGTRLRVLASEDTRVLRTVCNACVSCGGK 70

Query: 52  KIRSFLVTECASLFNV-----------------NHLTALRVGAAIECIHCYSLIHDDLPS 94
           + R  L+   A L +                  +      + A +E IH  SL+HDD+  
Sbjct: 71  RWRPLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLSAVVELIHTASLLHDDIE- 129

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            D+   RRGKP  +++Y     + A + L  +A  +I +    ++  +++ L  +     
Sbjct: 130 -DHSSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTL--SIEPALKAALFSATISAT 186

Query: 155 GLQGMLGGQMLDIQDEFIDE-----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
               M  GQ LDI      E      Q   +  +KTGAL+  + E G + A  S  E   
Sbjct: 187 RALHM--GQALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGELGFLCAGYSAREA-- 242

Query: 210 LRCFG---ENLGIIFQLADDL 227
            R FG     +GI FQ+ DD+
Sbjct: 243 -RSFGAQVMPIGIGFQILDDV 262


>gi|156093832|ref|XP_001612954.1| prenyl transferase [Plasmodium vivax SaI-1]
 gi|148801828|gb|EDL43227.1| prenyl transferase, putative [Plasmodium vivax]
          Length = 522

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 7/165 (4%)

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                ++ AA E IH  SL+HDD+  +D+   RRG P +H +Y    +I++G+ LL  A 
Sbjct: 246 GENQYKIIAASEIIHMGSLLHDDV--IDDSNNRRGAPALHKKYGNKISILSGDFLLARAS 303

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            + +           + ++ SL     ++G L    L   +        F+    KT +L
Sbjct: 304 SVFAGTGCPQICRRFAYVVESL-----IKGELLQTNLKFNNIEDALKTYFIKTYHKTASL 358

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                   AI++  ++   E     G ++G+ FQL DD LD + D
Sbjct: 359 FSHLFACIAILSFKNEKVIELCFNLGLHIGMAFQLYDDYLDYKPD 403


>gi|320582142|gb|EFW96360.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor (HPS)
           [Pichia angusta DL-1]
          Length = 469

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 39/211 (18%)

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           + +     N       R+    E IH  SL+HDD+  +D    RRG+ + ++ +    AI
Sbjct: 159 LYKAKDAQNGILPKQRRLAEITEMIHTASLLHDDV--IDFSDSRRGRDSGNVAFSNKMAI 216

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ---------------GMLGG 162
           +AG+ LL  A   +   +      + S  + +L     +Q               G +  
Sbjct: 217 LAGDFLLGRASVSLGRLRNSEVVELMSTAIANLVEGEFMQLKNTVMQPNIGQIEDGGVVK 276

Query: 163 QMLDI--------------------QDEFIDETQVFMIQK--MKTGALMCFACESGAIMA 200
           Q+ +                      +E ++    + + K  +KT +LM  +  S AI+A
Sbjct: 277 QIPEPTGKVPVEVHEYSVKTPETISHEENVEAAFQYYLHKTYLKTASLMSKSSRSAAILA 336

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +++  E    FG NLG+ FQ+ DD+LD  
Sbjct: 337 GCNEDVIENCYQFGRNLGLCFQIVDDMLDYT 367


>gi|302674533|ref|XP_003026951.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8]
 gi|300100636|gb|EFI92048.1| hypothetical protein SCHCODRAFT_61590 [Schizophyllum commune H4-8]
          Length = 443

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 19/181 (10%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L+T   ++      T +R+   +E IH  SL+HDD+  +D   +RRG  +    +   
Sbjct: 176 PPLLTAAPTIL----PTQMRLAHVLEMIHAASLLHDDV--IDASPLRRGVASAPEAFGNN 229

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A++ GN +L  A   ++         +             +  ++ G++L ++ +   +
Sbjct: 230 LAVLGGNFVLGRASAALARLGDLEVVGLI---------ASIISNLVEGEILQLKSQNPSD 280

Query: 175 TQ--VFMIQKMKTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDC 230
                     MKT +LM     +   +    + E   E    +G NLGI FQL DD+LD 
Sbjct: 281 AWNLYLQKTYMKTASLMAKGARAAVALGGCKEGEVWREVAYAYGRNLGIAFQLQDDILDY 340

Query: 231 E 231
           E
Sbjct: 341 E 341


>gi|118399458|ref|XP_001032054.1| Polyprenyl synthetase family protein [Tetrahymena thermophila]
 gi|89286391|gb|EAR84391.1| Polyprenyl synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 438

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 18/207 (8%)

Query: 44  RYALLGGKKIRSFLVTECAS-LFNVNH----------LTALRVGAAIECIHCYSLIHDDL 92
            Y    GK +R  L    +  LF+                    A IE IH  SL+HDD+
Sbjct: 132 HYYSKEGKLVRPSLNFLLSQILFDGTTQEFFEKKDLVEKQRLWAAVIENIHVSSLVHDDI 191

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +DN + RRG  T H+++    A+ +G+ ++  + + IS         I S +M +LTH
Sbjct: 192 --IDNAFTRRGLETAHVKFGHREAVFSGDYIIGRSGQQISRFNDIRMYQIYSHIMENLTH 249

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
               Q           DE I+  Q  +    KT +LM F+ +   I+ +   + +E L  
Sbjct: 250 GEINQANSKRTYKYDLDEIIN--QYILKTYYKTASLMAFSAQGVGIILNQDFHNQECLFK 307

Query: 213 FGENLGIIFQLADDLLDCEED---LPK 236
           F ++LGI FQLADD+LD   D   L K
Sbjct: 308 FAQHLGISFQLADDMLDYTSDSAQLGK 334


>gi|330465077|ref|YP_004402820.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
 gi|328808048|gb|AEB42220.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
          Length = 372

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 93/254 (36%), Gaps = 27/254 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTEC 61
           L +  ++    ++  L + L      + T          +A    L GGK++R       
Sbjct: 17  LAAYTRDLVTAVEQTLAEFLDAEVDALATIDPAMGGFAATARDCVLAGGKRVRPTFGYWG 76

Query: 62  ---ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI--------- 109
              A+  +      L   A +E +H ++L+HDD+  MD+   RRG+PT H+         
Sbjct: 77  WRGAASGDEPLHRVLPALATLELLHTFALVHDDV--MDHSATRRGRPTAHVAMAAQHAAA 134

Query: 110 -------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                  ++ E  A++ G+  L +A ++++         +  +          + G    
Sbjct: 135 GRCGDSGRFGEAVAVLIGDLCLVWADQLLARAALPASRLLDVRRGYDRMRVETIAGQYLD 194

Query: 163 QMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNE--KERLRCFGENLGI 219
            + +   E     +   + + KT    +      GA +A         +    +G  +G 
Sbjct: 195 ILGEADPENWSVDRALRVARYKTASYTVQRPLLFGASLAGVDGGTPLTDAYTRYGLAVGE 254

Query: 220 IFQLADDLLDCEED 233
            FQL DDLL    D
Sbjct: 255 AFQLRDDLLGVYGD 268


>gi|308177142|ref|YP_003916548.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
 gi|307744605|emb|CBT75577.1| farnesyltranstransferase [Arthrobacter arilaitensis Re117]
          Length = 369

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 23/242 (9%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNV-NH 69
            ++I   L+++ +Q              L S I  +L  GK +R  LV      F   N 
Sbjct: 30  RQKISDRLEEIAIQAQRRSAAYSAQTALLWSRISKSLATGKLMRPSLVMLGYRAFGGGNE 89

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-----------------D 112
             A+ +G A E +H   LIHDD+  +D  ++RRGK T+   Y                  
Sbjct: 90  ARAIDLGCAFELLHAALLIHDDV--VDRDFMRRGKATISALYRDQASASGRSLADAEHAG 147

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
               IIAG+ L++ A ++ +            +            G L   +  +     
Sbjct: 148 NSVGIIAGDLLISEAIKLAARAAAGSDSEAGVEQAFFEAIEQAGAGELEDLLYSLGSAAA 207

Query: 173 DETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +QV  +++MKT A       ++GA++A A   + E +   G  LG+ +Q+ DD+L   
Sbjct: 208 TTSQVLRMEQMKTAAYSFQLPLQAGALLAGAHPGQAEAIGAVGCQLGVAYQIIDDVLGTF 267

Query: 232 ED 233
            D
Sbjct: 268 GD 269


>gi|14625002|dbj|BAB61881.1| farnesyl diphosphate synthase [Agrobacterium ferrugineum]
          Length = 141

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 10/147 (6%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P+MDN  +RRG PTVH ++DE  A++AG+ L T +FE+++          R  L+ 
Sbjct: 1   HDDMPAMDNDDLRRGLPTVHRKWDEGVAVLAGDALQTLSFELLTDATLGPN---RLALIS 57

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           S+    G +GM+ GQ  DI  E     +   Q+  +Q  KTGAL  ++  +G ++A A  
Sbjct: 58  SMARAAGARGMVLGQARDIAAETAATPLTLPQITRLQAGKTGALFEWSATAGPVLAGADT 117

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCE 231
                L  F   +G+ FQ+ADD+LD E
Sbjct: 118 G---PLGRFAAAIGLAFQIADDILDVE 141


>gi|68474524|ref|XP_718635.1| hypothetical protein CaO19.7478 [Candida albicans SC5314]
 gi|46440414|gb|EAK99720.1| hypothetical protein CaO19.7478 [Candida albicans SC5314]
          Length = 510

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 56/213 (26%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D    RRG+P+ +I +    A++AG+ LL  A   I+ 
Sbjct: 199 RLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRASVAIAR 256

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQ------------------------------------ 157
            +      + S  + +L     +Q                                    
Sbjct: 257 LRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDVKSIPQPTGKVPTKLHQ 316

Query: 158 -----------GMLGGQMLD---IQDEFIDETQVFMIQKMK----TGALMCFACESGAIM 199
                      G  GG   D   + D  I+    F     K    T +LM  +C + A++
Sbjct: 317 YSVQQQQRTTNGGNGGDSADAAVVVDHEINVEAAFEYYLHKTYLKTASLMSKSCRAAAVL 376

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + A  +  E    FG NLG+ FQ+ DD+LD   
Sbjct: 377 SGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTS 409


>gi|296242804|ref|YP_003650291.1| polyprenyl synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095388|gb|ADG91339.1| Polyprenyl synthetase [Thermosphaera aggregans DSM 11486]
          Length = 365

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 35/260 (13%)

Query: 3   GGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
                 L  + K +++ L    D L + AS +    +     A  Y L GGK+IR+FL  
Sbjct: 2   EEFSDLLNYSVKIVESRLREVFDALEKEASEVSPHLSSIPYIARDYTLRGGKRIRAFLAL 61

Query: 60  ECA---SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-------- 108
                 +    +     ++ A +E +  Y L+HDD+  MD   +RRG PTVH        
Sbjct: 62  VGYWSKAWGTGDVDRVSKLMATLELLQSYLLVHDDIMDMDE--LRRGGPTVHVWFKEECL 119

Query: 109 --------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
                     Y    AI  G+ L   A E ++  K   +   +    L  T++ GL+ + 
Sbjct: 120 KTRVSSNCAHYGVSQAITVGDYLEATAVENLAMLKLPGEAFEK----LITTYSRGLRKVA 175

Query: 161 GGQMLDIQD-----EFIDETQVFMIQKMKTG-ALMCFACESGAIMA-HASQNEKERLRCF 213
            GQ LD+         + E  + ++ K+KT    +      GAI +   +      L  +
Sbjct: 176 YGQYLDVLYSSLPLARVGENDILVVHKLKTASYTVELPLHLGAIASLKYTDRLLNELSSY 235

Query: 214 GENLGIIFQLADDLLDCEED 233
               GI FQL DD++    D
Sbjct: 236 AIPAGIAFQLRDDIIGLFGD 255


>gi|120402584|ref|YP_952413.1| polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119955402|gb|ABM12407.1| Polyprenyl synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 1155

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 21/247 (8%)

Query: 4    GLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            GL +        +   L+D +  + A  +     D     +   L GGK +RS  +    
Sbjct: 805  GLMAWRDTVRTAVREHLEDFVRGECARRLDGGGVDVAAELLCGFLDGGKYVRSTYMYLGW 864

Query: 63   SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-------------- 108
                     ALR  A++E +H ++LI DD+  MD+  +RR +P+ H              
Sbjct: 865  LCGEREDTAALRASASLELLHTFALIQDDV--MDSSPMRRARPSAHVALGRWHRDRALSG 922

Query: 109  --IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
               ++ E  AI+ G+  L +A E++           R              G L   +L+
Sbjct: 923  SASRFGESAAILLGDLCLVWAEEMLRRSGVDADALARVWPRYDAMRTELAIGQLSD-LLN 981

Query: 167  IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                F    +V  + + K+G   +    E GA MA  S +  + L  +G  +G  FQL D
Sbjct: 982  SCQTFPTLPEVLDVLRRKSGNYTVRRPLELGAAMAGCSADVADALSGYGAAIGEAFQLRD 1041

Query: 226  DLLDCEE 232
            D+L    
Sbjct: 1042 DILGVFG 1048


>gi|254577169|ref|XP_002494571.1| ZYRO0A04620p [Zygosaccharomyces rouxii]
 gi|238937460|emb|CAR25638.1| ZYRO0A04620p [Zygosaccharomyces rouxii]
          Length = 468

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 41/202 (20%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+ + ++ +    A++AG+ LL  A   IS 
Sbjct: 174 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRASGNVAFTNKMAVLAGDFLLGRATVAISR 231

Query: 134 PKTQLKDNIRSQLML------------------------------------SLTHNIGLQ 157
            +      + S  +                                     +  H+  + 
Sbjct: 232 LRNPEVVELMSNSIANLVEGEFMQLKNTAVEDISIINQGNKPLPAASKKLNNEVHDYRVP 291

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
             +G  +   Q              +KT AL+  +  + AI++   +   ++   FG+++
Sbjct: 292 RAVGEGISHDQMIETAFDYYLHKTYLKTAALISKSSRAAAILSGVDRTVVDQCYEFGKDI 351

Query: 218 GIIFQLADDLLDCE---EDLPK 236
           GI FQL DD+LD     +DL K
Sbjct: 352 GICFQLVDDMLDFTVSAKDLGK 373


>gi|160893232|ref|ZP_02074020.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50]
 gi|156865315|gb|EDO58746.1| hypothetical protein CLOL250_00778 [Clostridium sp. L2-50]
          Length = 170

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 6/137 (4%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
            +KL+ ++K +  I+      T +  +      + +A+ Y+   GGK++R  L+ E   L
Sbjct: 3   KNKLELHTKEVQNII-----YTYAPAEEGFQKTIFTAMNYSFQAGGKRLRPLLMQETYRL 57

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F           AAIE IH YSLIHDDLP++DN   RRG+ T H+ + E  AI+AG+ LL
Sbjct: 58  FGGTGKVVEPFMAAIEMIHTYSLIHDDLPALDNDEYRRGRKTSHVVFGEAMAILAGDALL 117

Query: 125 TYAFEIISSPKTQLKDN 141
            YAFE           N
Sbjct: 118 NYAFETACKAFELEPGN 134


>gi|290891441|ref|ZP_06554500.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429]
 gi|290478883|gb|EFD87548.1| hypothetical protein AWRIB429_1890 [Oenococcus oeni AWRIB429]
          Length = 335

 Score =  131 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/196 (23%), Positives = 74/196 (37%), Gaps = 22/196 (11%)

Query: 50  GKKIRSFLVTECASLF------NVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYI 100
           GK IR+ +              N +  T   +    AAIE +H  +L+HDD+  +DN   
Sbjct: 44  GKMIRALITILFGRYTLTVNQKNYDQETIFSIDQCAAAIELLHLATLVHDDV--IDNAEK 101

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  T+   +     I  G+ L T  F +++S               S    +    ++
Sbjct: 102 RRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTSLA---PSKEFIAYHSSAMEKVLTGELI 158

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKE--RLRCFG 214
             Q      +     + +   K KT  L   +  SG  +        ++  E      FG
Sbjct: 159 --QDALKFHKQTTLAEYYQAIKGKTATLFSLSAVSGVWLGKKNKQFDEDNLEFKNAFNFG 216

Query: 215 ENLGIIFQLADDLLDC 230
            NLG+ FQ+ DDL D 
Sbjct: 217 YNLGMAFQMLDDLKDL 232


>gi|118587470|ref|ZP_01544895.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni
           ATCC BAA-1163]
 gi|118432120|gb|EAV38861.1| heptaprenyl diphosphate synthase, component II [Oenococcus oeni
           ATCC BAA-1163]
          Length = 335

 Score =  131 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/196 (23%), Positives = 74/196 (37%), Gaps = 22/196 (11%)

Query: 50  GKKIRSFLVTECASLF------NVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYI 100
           GK IR+ +              N +  T   +    AAIE +H  +L+HDD+  +DN   
Sbjct: 44  GKMIRALITILFGRYTLTVNQKNYDQETIFSIDQCAAAIELLHLATLVHDDV--IDNAEK 101

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  T+   +     I  G+ L T  F +++S               S    +    ++
Sbjct: 102 RRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTSLA---PSKEFIAYHSSAMEKVLTGELI 158

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKE--RLRCFG 214
             Q      +     + +   K KT  L   +  SG  +        ++  E      FG
Sbjct: 159 --QDALKFHKQTTLAEYYQAIKGKTATLFSLSAVSGVWLGKKNKQFDEDNLEFKNAFNFG 216

Query: 215 ENLGIIFQLADDLLDC 230
            NLG+ FQ+ DDL D 
Sbjct: 217 YNLGMAFQMLDDLKDL 232


>gi|116491791|ref|YP_811335.1| geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
 gi|116092516|gb|ABJ57670.1| Geranylgeranyl pyrophosphate synthase [Oenococcus oeni PSU-1]
          Length = 335

 Score =  131 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/196 (23%), Positives = 74/196 (37%), Gaps = 22/196 (11%)

Query: 50  GKKIRSFLVTECASLF------NVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYI 100
           GK IR+ +              N +  T   +    AAIE +H  +L+HDD+  +DN   
Sbjct: 44  GKMIRALITILFGRYTLTVNQKNYDQETIFSIDQCAAAIELLHLATLVHDDV--IDNAEK 101

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG  T+   +     I  G+ L T  F +++S               S    +    ++
Sbjct: 102 RRGLTTLQNFFGNKNTIYLGDILFTKYFYLLTSLA---PSKEFIAYHSSAMEKVLTGELI 158

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKE--RLRCFG 214
             Q      +     + +   K KT  L   +  SG  +        ++  E      FG
Sbjct: 159 --QDALKFHKQTTLAEYYQAIKGKTATLFSLSAVSGVWLGKKNKQFDEDNLEFKNAFNFG 216

Query: 215 ENLGIIFQLADDLLDC 230
            NLG+ FQ+ DDL D 
Sbjct: 217 YNLGMAFQMLDDLKDL 232


>gi|254451056|ref|ZP_05064493.1| polyprenyl synthetase [Octadecabacter antarcticus 238]
 gi|198265462|gb|EDY89732.1| polyprenyl synthetase [Octadecabacter antarcticus 238]
          Length = 286

 Score =  131 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 21/235 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
            G+  +       ID  +D LLL         +  R+  A RY    GG ++R+ L  + 
Sbjct: 5   FGIKDRSAVLLTEIDAEIDRLLLP--------NPSRVADAARYHFSAGGARVRARLGLDA 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A+  N++   +L    A E +H  SL+HDDL   D   +RRGKP+V  ++ +  AI  G+
Sbjct: 57  AATLNLSPQASLACAIAPELLHNASLVHDDLQ--DGDAMRRGKPSVWSRFGKNIAISTGD 114

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L++ A+  I+              +     +  +   + GQ  D +           I 
Sbjct: 115 LLISAAYMAIAVHPYPA--------LALCAMHDAVSYTIDGQTQDCRSTQPTPEAYVNIA 166

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             K+G L+        I A A    +E +   G  L I +Q  DD++D  +DL K
Sbjct: 167 ANKSGPLLALPIRLALIAAQAPG--QETVVHAGRALAIAYQTLDDIMDRADDLAK 219


>gi|319440242|ref|ZP_07989398.1| putative polyprenyl diphosphate synthase [Corynebacterium variabile
           DSM 44702]
          Length = 373

 Score =  131 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 94/262 (35%), Gaps = 39/262 (14%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHN---DRLLSAIRYALLGGKKIRSFLVTEC 61
           L   L +    +D  LD       + +        D + +  ++   GGK++R       
Sbjct: 10  LDRPLADVPSAVDAELDRFFHDRHAEIDDLDPVVADGVDALEQFVTGGGKRLRPLFAWAG 69

Query: 62  ASLF----------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ- 110
                         +      LR   ++E I   +LIHDD+  +D+   RRG+PT H + 
Sbjct: 70  VRAALDGGGGTLSGSTGPEDLLRAVGSLEFIQACALIHDDI--IDHSDTRRGRPTTHRRF 127

Query: 111 ---------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
                          Y E  AI+ G+    +A +++           R++          
Sbjct: 128 EASHRGNGWSGDAVGYGESQAILVGDLAFAWADDMLVDSGVDAASLARAREPWRKMRT-- 185

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE----SGAIMAHASQNEKERLR 211
              ++ GQMLDI  E        M +K+ T     +  E     GA +  A     + LR
Sbjct: 186 --EVIAGQMLDIALENSGSEDPAMSEKVNTYKTAAYTVERPLHLGAALGDADARTVDLLR 243

Query: 212 CFGENLGIIFQLADDLLDCEED 233
             G  +GI FQL DD L    D
Sbjct: 244 TAGREIGIAFQLEDDHLGVFGD 265


>gi|188527047|ref|YP_001909734.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Shi470]
 gi|188143287|gb|ACD47704.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Shi470]
          Length = 307

 Score =  131 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           N    T     A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  NGKTDTILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGESIA-QALSNAVLRLSRGEIEDVFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|308063102|gb|ADO04989.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Sat464]
          Length = 307

 Score =  131 bits (330), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + +                 K +RS L+     L 
Sbjct: 3   EKQLKAIQNKIASWIKEIESAFIDELSSNIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           N          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  NGKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGESIA-QTLSNAVLRLSRGEIEDVFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDTKIYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|6706999|gb|AAF25540.1|AF104994_10 geranyl transferase [Streptomyces coelicolor A3(2)]
          Length = 386

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 19/230 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E    I T+ + +      H   QH D   +A       GK IR  LV   A+       
Sbjct: 63  ELRSAIATLPESMRRVALYHFGWQHADGTPAAGN----AGKAIRPALVLTAAAALGGPGA 118

Query: 71  TALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            A  V AA   E +H ++L+HDD+  MD    RR +PT    + +  AI+AG+ L   A 
Sbjct: 119 RAAAVRAAAAVELVHNFTLLHDDV--MDRDATRRHRPTAWTVFGDADAILAGDALQALAL 176

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKM 183
            + ++          ++L         +  +  GQ  D   E      +   +  ++ + 
Sbjct: 177 RLFAADPHPASAAAATRL------ADCVMELCEGQHADTAMERPPPDEVTLDETLVMAEA 230

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KTGAL+  AC  GA+ A A+  + E L  FG   G+ FQL DD++    D
Sbjct: 231 KTGALLGCACAVGALYAGAATEDVEALDAFGREPGMAFQLIDDVIGIWGD 280


>gi|308061594|gb|ADO03482.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Cuz20]
          Length = 307

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           N          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  NGKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGESIA-QTLSNAVLRLSRGEIEDVFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|215429394|ref|ZP_03427313.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           EAS054]
 gi|289752601|ref|ZP_06511979.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           EAS054]
 gi|289693188|gb|EFD60617.1| polyprenyl-diphosphate synthase grcC1 [Mycobacterium tuberculosis
           EAS054]
          Length = 335

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 21/194 (10%)

Query: 41  SAIRYALL-----GGKKIRSFLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPS 94
             +  +LL     GGK+ R       A +    +       GA IE IH  +L HDD+  
Sbjct: 42  EVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV-- 99

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           MD   +RRG P+ + Q+    AI+AG+ LL  A  +++    +      +  +++ T   
Sbjct: 100 MDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLGPE------AVRIIADTFA- 152

Query: 155 GLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
               ++ GQM + +    +     Q   + + KTG+L+  A   G + + A+  + ERL 
Sbjct: 153 ---QLVTGQMRETRGTSENVDSIKQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLS 209

Query: 212 CFGENLGIIFQLAD 225
             G  +G  FQ+AD
Sbjct: 210 RLGGVVGTAFQIAD 223


>gi|115373108|ref|ZP_01460410.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369864|gb|EAU68797.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 401

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 13/237 (5%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
           + LQ    +I+  L +L  L   + + ++    ++    YAL   K++R  LV     L 
Sbjct: 60  TWLQLVQAQIEASLAELFELPDEACLDSRWKQAMVRTRAYALRPAKRLRPVLVVAGYHLT 119

Query: 65  --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTAI 117
                      +  A +E +H + LIHDD+   D   +RRG   +H      +  E  A+
Sbjct: 120 RGGAGVPPGLWQFAAGLELLHTFLLIHDDVA--DRADLRRGGAALHHLLAPGRAGEDLAV 177

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L   A E +     +       Q  L++  +      L   +       +   Q 
Sbjct: 178 VVGDHLFARAMEAMLGSGLRGAAKA-CQYYLAVCRHTAAGQYLDLDLSRAALADVGLFQA 236

Query: 178 FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  +KT     C     GAI+A A +   + L   G   G+ +QL DD+L    D
Sbjct: 237 LRVAHLKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQLRDDVLGLFGD 293


>gi|167892795|ref|ZP_02480197.1| heptaprenyl diphosphate synthase component II [Burkholderia
           pseudomallei 7894]
          Length = 363

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 17/230 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + +   R    L D L     ++     +            GKKIR  L+   ASLF 
Sbjct: 25  ALVADEQARFHAALADALEPQRPYLTGLEYETYQR--------GKKIRPLLLLLAASLFR 76

Query: 67  VNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            +          A+    ++E +H  +LIHDD+  +D   +RRG  +V        AI+ 
Sbjct: 77  ADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRRGIASVVGARGIDMAILV 134

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+     A  + +       D    +L+L +  ++    +    +   +         F 
Sbjct: 135 GDLQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFK 194

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +   KT  L   ACE GA ++ A++ E   L  +G +LGI FQ+ DD+ D
Sbjct: 195 VADRKTAVLFGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFD 244


>gi|134279621|ref|ZP_01766333.1| IS element protein [Burkholderia pseudomallei 305]
 gi|167901285|ref|ZP_02488490.1| heptaprenyl diphosphate synthase component II [Burkholderia
           pseudomallei NCTC 13177]
 gi|254181827|ref|ZP_04888424.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
 gi|134248821|gb|EBA48903.1| IS element protein [Burkholderia pseudomallei 305]
 gi|184212365|gb|EDU09408.1| octaprenyl-diphosphate synthase [Burkholderia pseudomallei 1655]
          Length = 363

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 17/230 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + +   R    L D L     ++     +            GKKIR  L+   ASLF 
Sbjct: 25  ALVADEQARFHAALADALEPQRPYLTGLEYETYQR--------GKKIRPLLLLLAASLFR 76

Query: 67  VNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            +          A+    ++E +H  +LIHDD+  +D   +RRG  +V        AI+ 
Sbjct: 77  ADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRRGIASVVGARGIDMAILV 134

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+     A  + +       D    +L+L +  ++    +    +   +         F 
Sbjct: 135 GDLQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFK 194

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +   KT  L   ACE GA ++ A++ E   L  +G +LGI FQ+ DD+ D
Sbjct: 195 VADRKTAVLFGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFD 244


>gi|217419927|ref|ZP_03451433.1| polyprenyl synthetase [Burkholderia pseudomallei 576]
 gi|217397231|gb|EEC37247.1| polyprenyl synthetase [Burkholderia pseudomallei 576]
          Length = 363

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 17/230 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + + +   R    L D L     ++     +            GKKIR  L+   ASLF 
Sbjct: 25  ALVADEQARFHAALADALEPQRPYLTGLEYETYQR--------GKKIRPLLLLLAASLFR 76

Query: 67  VNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
            +          A+    ++E +H  +LIHDD+  +D   +RRG  +V        AI+ 
Sbjct: 77  ADGARRAPLPVKAIMGAVSLEMLHVATLIHDDI--IDAAPLRRGIASVVGARGIDMAILV 134

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+     A  + +       D    +L+L +  ++    +    +   +         F 
Sbjct: 135 GDLQFIQAIRVFARHVDTQADMALVRLVLDVGFSLCCGEIDERSVDRRESIGFLRNHYFK 194

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +   KT  L   ACE GA ++ A++ E   L  +G +LGI FQ+ DD+ D
Sbjct: 195 VADRKTAVLFGLACEIGAALSGATKREIRALSQYGRDLGIAFQIMDDVFD 244


>gi|313885281|ref|ZP_07819032.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619387|gb|EFR30825.1| polyprenyl synthetase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 321

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 9/225 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           + +   +I++ L+ +     + +   + +     + Y    GK  R+ LV   A L    
Sbjct: 5   IWQAYPKIESDLERVKKMMIAEISVSNPEIKAKIMDYINASGKFARAGLVLMFARLNQKT 64

Query: 69  -HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                L + A IE  H  +LIHDD+  +D    RRG    H+      AI AG+ LL YA
Sbjct: 65  ISQEKLNIAAGIELFHLATLIHDDV--IDEADQRRGIQAFHLAESNRIAIYAGDYLLAYA 122

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
              +          I  + +      + L G L  Q+ ++ D  +   +     K KT  
Sbjct: 123 MRFLYQSGLNDFSGIEQKTI-----ELILNGELN-QLKNVADPTMTIYRYLRQIKGKTAL 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           L   A   G      S+ + ++    GE +G+ FQL DD LD  +
Sbjct: 177 LFGLATVGGYQTESISRRQLKQAYYAGEEIGMAFQLIDDQLDFFQ 221


>gi|11066676|gb|AAG28699.1|AF272737_2 CrtE [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 425

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 92/237 (38%), Gaps = 27/237 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVG 76
            +L + + +  +      ++       + L GGK++R  L+          +   ALR+G
Sbjct: 52  AVLAERVDEAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAADTTAALRLG 111

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAG 120
            A+E I   +LIHDD+  MD   +RRGKP VH                  +    A++AG
Sbjct: 112 VALELIQSCALIHDDV--MDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAG 169

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +  L +A + ++          R   +           M+ GQ LD++ +    + V   
Sbjct: 170 DLALAWADDTVAETALSAVQRRRIGPLWRTMRT----EMVAGQYLDLRGQVRGGSSVEQA 225

Query: 181 QKMKTGALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +        ++ E    +  A     +   + LR  G   GI FQL DDLL    D
Sbjct: 226 LRTACLKSASYSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGD 282


>gi|170103887|ref|XP_001883158.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642039|gb|EDR06297.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 434

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 14/171 (8%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            T LR+   +E +H  SL+HDD+  +D   +RRG P+   ++    +++ GN +L  A  
Sbjct: 163 PTQLRLAQIVEMLHTASLLHDDV--IDASPLRRGAPSAPSKFGSKLSVLGGNFILGRAST 220

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID------ETQVFMIQKM 183
            ++     L D   +QL+ S+  N+    +L  + +  +D  ++       T       +
Sbjct: 221 ALAR----LGDAEVTQLIASVISNLVEGEILQMRDVKDKDVGVEGKTKNAWTVYLQKTYL 276

Query: 184 KTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEE 232
           KT +LM     S  ++    + E   +    +G NLGI FQL DD+LD E 
Sbjct: 277 KTASLMAKGARSAVVLGGCEEGEVWKDIAYAYGRNLGIAFQLIDDILDYES 327


>gi|156086492|ref|XP_001610655.1| polyprenyl synthetase superfamily protein [Babesia bovis T2Bo]
 gi|154797908|gb|EDO07087.1| polyprenyl synthetase superfamily protein [Babesia bovis]
          Length = 457

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 49/257 (19%)

Query: 18  TILDDLLLQTASHMQTQ---HNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNH---- 69
           T L+ L+ +    +Q+Q    N  +   ++Y L G  K  R  L    A L ++ +    
Sbjct: 108 TTLERLVNKFQERIQSQVLTDNTEINDVVKYVLTGQSKLFRPKLGLMVARLLSMRNTHGE 167

Query: 70  ------------------------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
                                      LR+  + E +H  SL+HDD+  +D+  +RR  P
Sbjct: 168 NTTSADEGSTLGYMNYGNLSTELMDKVLRLLQSYEIVHIGSLMHDDV--LDSANLRRRMP 225

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            VH++     A++ G+ +LT A   +++  +Q         +L++  +  L+ ++ G++ 
Sbjct: 226 AVHVKAGVKIAVLVGDLMLTRACSTVANLGSQ---------VLTVRMSKALENLIKGEIT 276

Query: 166 DIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            ++     E+          +KT +L+   C S A +    +    +    G ++G+ FQ
Sbjct: 277 TVEGTDNVESMMCNYLKKTFLKTASLIAECCASIASLLRQDEITCHKCYLLGLHVGMAFQ 336

Query: 223 LADDLLDCE---EDLPK 236
           + DDLLD E    DL K
Sbjct: 337 IYDDLLDYECGSSDLGK 353


>gi|162452480|ref|YP_001614847.1| geranyltranstransferase [Sorangium cellulosum 'So ce 56']
 gi|161163062|emb|CAN94367.1| Geranyltranstransferase [Sorangium cellulosum 'So ce 56']
          Length = 370

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 93/239 (38%), Gaps = 24/239 (10%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTECASLF 65
           L     R+D  LD      A+ +Q    +    +  A    L GGK+ R+ L+       
Sbjct: 34  LSSIRPRVDAALDQRWRDKAASVQRYGREVEAMVSEARSLTLRGGKRFRAGLLVAAYQGV 93

Query: 66  NVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------DEV 114
             +     A+  G A+E +  Y LI DD   +D   +RRG  TVH+              
Sbjct: 94  APDAPLGPAIDAGVALELLQTYLLIQDD--WIDGDTVRRGDRTVHVALTETLGDPHLGAS 151

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
           +AI+AG+   ++A   ++         + + L+    H      ++ GQ LD+       
Sbjct: 152 SAILAGDLTWSFALSTLAGADAPPATTLAAVLLFCKMHE----DVVIGQHLDVVGRA--- 204

Query: 175 TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             V  +  +KTG   +      GA +A A       L  F   +G+ FQL DDLL    
Sbjct: 205 EDVEQMHALKTGSYTVRGPLALGATLAGAPAETVAALERFAAPVGVAFQLRDDLLGTFG 263


>gi|296269323|ref|YP_003651955.1| polyprenyl synthetase [Thermobispora bispora DSM 43833]
 gi|296092110|gb|ADG88062.1| Polyprenyl synthetase [Thermobispora bispora DSM 43833]
          Length = 358

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 87/249 (34%), Gaps = 23/249 (9%)

Query: 6   PSKLQENSKRIDTILDDLLLQTAS-HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
            + L      +D  +   L +             LL A    L GGK++R          
Sbjct: 5   AAPLDVVRPEVDRSIRRFLDRQRPLFFDDPQLATLLDAAEAFLSGGKRLRPAFCYWGWRA 64

Query: 65  FNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------- 111
                  A      A++E +   +LIHDD+  MD   +RRG P+ H ++           
Sbjct: 65  AGGGSDDARLYNAAASLELLQASALIHDDV--MDASDVRRGMPSAHRRFERMHLESRWHG 122

Query: 112 -----DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                 E  A++ GN LL +A E+  +     +    +Q +        + G     +  
Sbjct: 123 SAAQFGENAAVLLGNLLLVWAGEMWRTSGLPAEALAVAQPVHDHMLTELMCGQYLDLLEQ 182

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLGIIFQLA 224
            Q E   ++ + +         +      G ++A  S           +G+ +GI FQL 
Sbjct: 183 AQGEGTFDSALRVALYKSGKYSVEQPLRLGLLLAAQSRLPWIDTLCAQYGQRVGIAFQLR 242

Query: 225 DDLLDCEED 233
           DD+L    D
Sbjct: 243 DDILGVFGD 251


>gi|313681119|ref|YP_004058858.1| polyprenyl synthetase [Oceanithermus profundus DSM 14977]
 gi|313153834|gb|ADR37685.1| Polyprenyl synthetase [Oceanithermus profundus DSM 14977]
          Length = 329

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 7/221 (3%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           +++I   L   L    +  + +          Y   GGK +R  LV   A  +  +   A
Sbjct: 5   ARQIQRTLLAALPDPEAAPRPELAAYARLLRDYPERGGKMLRGRLVVLTARAYG-DDTAA 63

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
           L V AA+E    + L+HDD+   D+   RRG+P +H       A+ AG+ L    + +++
Sbjct: 64  LGVAAALELFQNWVLVHDDIE--DDSDERRGRPALHRLVPMPLALNAGDALHAAMWRLLA 121

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
               + K  +    ++  T     Q +     L+ + +   +  + M+++          
Sbjct: 122 EAGARRKVLLEFAELVETT--ASGQHLDLSWTLEGRFDLTPDDYLEMVRRKAAYYTAVAP 179

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              GA++A    +        G  LG+ FQ+ DD+L+ E D
Sbjct: 180 LRLGALVAGRMPD--PAFARAGLELGVAFQIVDDVLNLEGD 218


>gi|297562051|ref|YP_003681025.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846499|gb|ADH68519.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 360

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 22/213 (10%)

Query: 40  LSAIRYALLGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           + A+   + GGK++R                    +R  A++E +   +L+HDD+  +DN
Sbjct: 45  MDALEAMISGGKRLRPTFCYWGWRGAGGAAEDERVVRAAASLEFLQACALVHDDV--IDN 102

Query: 98  GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG P  H +                + +  AI+ G+  L ++ E+  +     +  
Sbjct: 103 SDTRRGLPATHKRLAKLHADQGWSGDSEGFGQGAAILIGDLCLAWSDEMYQASGFPTEVL 162

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMA 200
            R +          + G     +  ++     E  +  + + K+    +      GA +A
Sbjct: 163 GRGRPPFDAMRTEVMAGQYLDTLEQVRGTGTREAAL-RVMRYKSAKYTVERPLHLGAALA 221

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       +G  LGI FQL DD+L    D
Sbjct: 222 GRHGELAGVYTDYGIPLGIAFQLRDDVLGVFGD 254


>gi|14624998|dbj|BAB61879.1| farnesyl diphosphate synthase [Rhodobacter blasticus]
          Length = 138

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 8/142 (5%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+P MDN  +RRG PTVH+++DE TA++AG+ L T AFE++  P       +R  L+ 
Sbjct: 1   HDDMPCMDNDDLRRGLPTVHVKWDEATAVLAGDALQTLAFELLCDPVAG-PAEVRIGLVQ 59

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +L    G +GM+ GQ LDI  E     +   ++  +Q  KTGAL+ F+ E+GAI+A A  
Sbjct: 60  ALAQASGAEGMVLGQALDIAAETAGRPLTLDEITALQAGKTGALIRFSAEAGAILAQAD- 118

Query: 205 NEKERLRCFGENLGIIFQLADD 226
             +  LR +   LG+ FQ+ADD
Sbjct: 119 --RAPLRTYATALGLAFQIADD 138


>gi|254262158|emb|CAZ90487.1| Geranylgeranyl pyrophosphate synthase crtE [Enterobacter
           turicensis]
          Length = 224

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 11/172 (6%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +  A+E +H  SLI DD+P MDN  +RRG+PT+H QY E  AI+A   LL+ AF ++ + 
Sbjct: 1   MACAVEMVHASSLILDDIPCMDNAALRRGRPTIHRQYGEDVAILAAVALLSSAFGVMVAA 60

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFA 192
           +  L    RSQ +  L+  +G QG++ GQ  D+++        ++    ++KT  L    
Sbjct: 61  Q-GLSPECRSQAVAELSMAVGTQGLVQGQYKDLREGTAPRSAEEIATTNELKTSVLFGAT 119

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--------LDCEEDLPK 236
            +  A+ A AS   ++++RCF ++LG  FQL DDL         D  +D  K
Sbjct: 120 LQIAALAAGASPAARQKMRCFAQDLGQAFQLLDDLADGHAGTGKDINKDAGK 171


>gi|320449550|ref|YP_004201646.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01]
 gi|320149719|gb|ADW21097.1| geranylgeranyl diphosphate synthetase [Thermus scotoductus SA-01]
          Length = 330

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 83/222 (37%), Gaps = 9/222 (4%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + +   L + LL   +H    +   L     Y   GGK +R  LV             +L
Sbjct: 6   QEVKDALHERLLGHLTHPDPAYQALLQE---YPSRGGKMLRGLLVVYAGLAHGATLEASL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
             G A+E    + LIHDD+   D    RRG+P +H  Y    A+ AG+ L    + ++  
Sbjct: 63  WAGTALELFQNWVLIHDDIE--DGSEERRGRPALHRLYPMPLALNAGDALHGEMWGLLIR 120

Query: 134 PKTQ--LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
              +      + ++    +      Q +     L  + +   E  + M+           
Sbjct: 121 GLNEGLFGPEVLAEFHQVVHRTAYGQHLDLLWTLSGRLDLAPEDYLHMVAHKAAYYTAVA 180

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               GA+++  +          G  LGI FQ+ DD+L+ E D
Sbjct: 181 PLRLGALLSGKTP--PALYEEAGLKLGIAFQIMDDVLNLEGD 220


>gi|255671648|gb|ACU26409.1| geranylgeranyl pyrophosphate synthase CrtE [uncultured bacterium
           HF186_25m_30B18]
 gi|255671718|gb|ACU26476.1| geranylgeranyl pyrophosphate synthase [uncultured bacterium
           HF186_25m_13D19]
          Length = 356

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 15/239 (6%)

Query: 7   SKLQENSKRIDT-ILDDLLLQTASHMQTQHNDRLLSAIR-----YALLGGKKIRSFLVTE 60
           S L+   +R     L+  L     H     +  L   +R     +   GGK++R+ +V E
Sbjct: 19  SILRRREERTQAHALERGLEAVRDHALQTAHAHLNEPLRSMVVQHLQTGGKQVRARIVLE 78

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A       +T + + AA E +H  +L+HDDL   D   +RRG+P V +++ E  AI  G
Sbjct: 79  AARALGEEPMTLVPIAAACELLHNATLVHDDLQ--DGDTVRRGEPAVWVRHGEAQAINVG 136

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           + +L      ++  +  L  ++R    ++            GQ L+++     ++     
Sbjct: 137 DAMLMLP--TLALEQMLLMPSVR--WYIATAFTRRATETACGQALELELLGRGWLGRGPY 192

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                 K+G       E+ A+ A         +      LG +FQ+ DD+LD   D  +
Sbjct: 193 LRAALGKSGPFFSLPIETAALAAGRQPTRARAIGDALLALGALFQIRDDVLDLFGDKGR 251


>gi|255718931|ref|XP_002555746.1| KLTH0G16368p [Lachancea thermotolerans]
 gi|238937130|emb|CAR25309.1| KLTH0G16368p [Lachancea thermotolerans]
          Length = 470

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 42/203 (20%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+ + ++ +    A++AG+ LL  A   IS 
Sbjct: 175 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRASGNVAFTNKMAVLAGDFLLGRATVSISR 232

Query: 134 PKTQLKDNIRSQLML-------------------------------------SLTHNIGL 156
            +      + S  +                                      + TH+  +
Sbjct: 233 LRNPEVVELISNSIANLVEGEFMQLKNTAVDSDLTTVANGTQKIPPPSPKLTNPTHDYRV 292

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
               G                     +KT +L+  +C + AI++ A +   +    FG+N
Sbjct: 293 PVERGAVFSQEIVIDTAFDYYLHKTYLKTASLISKSCRAAAILSGAQETVVDECYNFGKN 352

Query: 217 LGIIFQLADDLLDCE---EDLPK 236
           LGI FQL DD+LD     ++L K
Sbjct: 353 LGICFQLVDDMLDFTISAKELGK 375


>gi|311114488|ref|YP_003985709.1| putative bifunctional short chain isoprenyl diphosphate synthase
           [Gardnerella vaginalis ATCC 14019]
 gi|310945982|gb|ADP38686.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Gardnerella vaginalis ATCC 14019]
          Length = 366

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 106/268 (39%), Gaps = 40/268 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQ-----TQHNDRLLSAIRYALL---GGKK 52
           M   L   L      I+T + +L+    + +      +  +  L   ++ A+    GGK+
Sbjct: 1   MWITLNMSLDSQKSCIETRISELIYDQFNSLACKNLISSCDKTLKDVVKQAISSSEGGKR 60

Query: 53  IRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           +R++L  E       N          L V  A+E     +L+HDD+  +D   +RRG+P+
Sbjct: 61  LRAYLALEAFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDI--IDESALRRGRPS 118

Query: 107 VHIQ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT-HNIGL 156
            +                 ++ G+ L T +F+I     T L++        +    N+G+
Sbjct: 119 AYCALSKACNSKHIGIGLGLMLGDILATQSFDITRKACTNLRNPQEVLGEFANMQRNVGI 178

Query: 157 QGMLGGQMLDIQDEFIDE-------TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKE 208
                GQ+LD+  E +              + + KT           G + A  ++N   
Sbjct: 179 -----GQVLDLSIEMMSLKNPKKLAESSINVFRWKTASYTTIAPLALGFLSAGLNKNYAI 233

Query: 209 RLR-CFGENLGIIFQLADDLLDCEEDLP 235
           +L    GE LGI FQ+ADDL+D   D  
Sbjct: 234 KLANDIGEPLGIAFQIADDLIDIVSDSA 261


>gi|68535811|ref|YP_250516.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
           K411]
 gi|260578102|ref|ZP_05846023.1| polyprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
           43734]
 gi|68263410|emb|CAI36898.1| putative polyprenyl diphosphate synthase [Corynebacterium jeikeium
           K411]
 gi|258603741|gb|EEW16997.1| polyprenyl diphosphate synthase [Corynebacterium jeikeium ATCC
           43734]
          Length = 389

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 93/276 (33%), Gaps = 53/276 (19%)

Query: 5   LPSKLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE- 60
           L S L      +D  L + L    +  S + +     +     + + GGK++R       
Sbjct: 13  LDSPLSAVPSAVDAQLKEYLSRSQEEFSPIGSLVGGAITVLSDFIVNGGKRVRPTFAWAG 72

Query: 61  ---CASLFNVNHLT--------------------ALRVGAAIECIHCYSLIHDDLPSMDN 97
                     +                        L   +A E I   +LIHDD+  +D 
Sbjct: 73  IRAAIEGGGGSPDALCGKGGDATSSSSADFNQGAILNALSAFEFIQACALIHDDI--IDR 130

Query: 98  GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG  T H                  Y    AI+ G+    +A ++ +         
Sbjct: 131 SDTRRGFSTAHRTFESKHRERGWLGSSEHYGVSQAILIGDLAFAWADDLYNGSGLSATAL 190

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTG-ALMCFACESGA 197
            R++             ++ GQ+LDI  E      V   F + K KT    +      GA
Sbjct: 191 QRAR----PAWRAMRTEVIAGQILDIALEANGSEDVADSFAVIKYKTASYTVARPLHIGA 246

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +A A++  +  LR  G+++G  FQL DD L    D
Sbjct: 247 ALAGANEQTQSMLRNVGQDIGEAFQLRDDQLGVFGD 282


>gi|84496184|ref|ZP_00995038.1| putative polyprenyl synthase / dimethylallyltranstransferase
           [Janibacter sp. HTCC2649]
 gi|84382952|gb|EAP98833.1| putative polyprenyl synthase / dimethylallyltranstransferase
           [Janibacter sp. HTCC2649]
          Length = 366

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 101/263 (38%), Gaps = 34/263 (12%)

Query: 1   MNGGL-PSKLQEN--SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRS 55
           M G    S L E     R+ T +D  L   A  +     D   LL  +   L GGK++R+
Sbjct: 1   MRGAFVTSPLDEADLRTRVQTCIDGELRHQAVVLHELGPDVTDLLDRVGSLLAGGKRLRA 60

Query: 56  FLVTECASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH------ 108
             +          +    +R+  A+E     +LIHDD+  MD+   RRG P  H      
Sbjct: 61  AFLYWGHRAAGRADSDELVRLATAMEFFQAAALIHDDV--MDDSDTRRGMPAAHRALAAV 118

Query: 109 ----------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                      ++    AI+AGN  LT+  E++++    ++D  R +++        + G
Sbjct: 119 HTERGWGGDDARFGVAGAILAGNLCLTWTDELVATSGLGVEDLARGRVVFDRMRTQLMAG 178

Query: 159 M-------LGGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERL 210
                   +         E I+  Q   + + K+    +      GA      + +   L
Sbjct: 179 QFLDVVDSVRPWDGLPASERIERAQ--RVIRYKSAKYTVEHPLLIGATAGGLGEADLAHL 236

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
             +G +LG  FQL DDLL    D
Sbjct: 237 SSYGLDLGHAFQLRDDLLGVFGD 259


>gi|317179364|dbj|BAJ57152.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F30]
          Length = 307

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L N          AL + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLNEKTDAILLDKALNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S    +L     S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMG-ELIAQALSNAVLRLSRGEIEDVFVGECF- 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 149 -----NSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|317010521|gb|ADU84268.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           SouthAfrica7]
          Length = 307

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 35/239 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    RI + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKRLKAIQNRIASWIKEIESGFIDTLFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  DETTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +   I S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGESIA-QILSNAVLRLSRGEIEDMFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KT   +  + +S AI+ +    + +    FG + G+ FQ+ DDLLD  +D   L K
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKMYADFGLHFGMAFQIIDDLLDITQDATTLGK 214


>gi|7648574|gb|AAF65590.1|AF139916_11 GGPP synthase [Brevibacterium linens]
          Length = 385

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 92/240 (38%), Gaps = 23/240 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTEC-ASLFNVNHLTA 72
            +  L  +L +     +T      +L  ++ +   GGK IR  ++ +  A+L   +   A
Sbjct: 46  FEDRLAQVLAEARKRSRTVSAQYGQLWDSLTHMATGGKLIRPRMLLDAHAALGGRDEHAA 105

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-----------------IQYDEVT 115
           +    A++ +H   +IHDD+  +DN  IRRG+ T+                    +   T
Sbjct: 106 VDAACAMQLLHIALVIHDDV--IDNDTIRRGEATISGEFASEAMSRGALRRDANAWGIAT 163

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           +I+ G+ +LT +  +++    +         +   T      G      L +  E  +  
Sbjct: 164 SILGGDLILTLSHSLLARLDIEDTKRRAILDIFDDTVVESAAGEHSDVWLSLHLEGANSP 223

Query: 176 QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            V  +   KT            A++A A     + L      +G+I+QL DD+L    D 
Sbjct: 224 DVLAMVDQKTAVYSFQAPLLIAAVLAGADSGLIDDLANISRQIGVIYQLRDDVLGLFGDE 283


>gi|317180046|dbj|BAJ57832.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F32]
          Length = 307

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L N          AL + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLNEKTDAILLDKALNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +     S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMGESIA-KALSNAVLRLSRGEIEDVFVGECF- 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 149 -----NSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|270641252|ref|ZP_06222125.1| geranyltranstransferase [Haemophilus influenzae HK1212]
 gi|270317343|gb|EFA28880.1| geranyltranstransferase [Haemophilus influenzae HK1212]
          Length = 220

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 2/137 (1%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVT 59
           + G    +L+E  +++ T ++  L      +++ HN  LL A+ YALL GGK++R FLV 
Sbjct: 75  LTGEQVDRLKEELQQVQTRINRFLEAQFEGIES-HNAPLLEAMEYALLLGGKRVRPFLVY 133

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+A
Sbjct: 134 ATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILA 193

Query: 120 GNGLLTYAFEIISSPKT 136
           G+ L ++AFEI++    
Sbjct: 194 GDALQSFAFEILTKTPN 210


>gi|52550292|gb|AAU84141.1| geranylgeranyl pyrophosphate synthase [uncultured archaeon
           GZfos37B2]
          Length = 361

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 34/256 (13%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNV 67
           +E +KR D ++ + L  +A + +    + +  ++   L G  GK +R  ++         
Sbjct: 9   KELAKRGD-LVYEYLA-SARYQERFAPEVIHDSVYLYLDGRRGKSLRPAVLLFSCGAAGG 66

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-----------------IQ 110
           +   A+   AA E  H ++L+HDD+  +D   +RRG  TVH                   
Sbjct: 67  DEEIAIPAAAATEVFHTWTLVHDDV--IDRDCMRRGGYTVHEEFRRRGVDLGYDGDKAAH 124

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD- 169
           Y    AI+AG+    ++  ++S    +  D      ++ +     +  +L GQ+ D+Q  
Sbjct: 125 YGTSLAILAGDVQQGWSVSLLSELAERGVDPAVVLHLIRMMETDVVIMLLSGQIFDVQYS 184

Query: 170 ----EFIDETQVFMIQKMKTGALMCFACESGAIMA----HASQNEKERLRCF-GENLGII 220
               E + E ++  +   KTGAL  FA  +GA++     +        +  F G   G  
Sbjct: 185 KAPIESLSEAKILGMLWRKTGALYEFAGAAGAMIGLSTTNRENELVRSISQFTGRC-GTA 243

Query: 221 FQLADDLLDCEEDLPK 236
           FQL DD+L    D  K
Sbjct: 244 FQLQDDILGVVGDTKK 259


>gi|254467778|ref|ZP_05081184.1| polyprenyl synthetase superfamily protein [beta proteobacterium
           KB13]
 gi|207086588|gb|EDZ63871.1| polyprenyl synthetase superfamily protein [beta proteobacterium
           KB13]
          Length = 303

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 23/239 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M     + L    K I   L D        ++ Q+  +           GK IR+ L   
Sbjct: 14  MPPEATADLHLVKKEIQKALQDKKTILNEWLKFQNRSK-----------GKFIRAQLALA 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L N+   T ++   A E IH  SLIHDD+   D    RRG  T+  +Y    AI  G
Sbjct: 63  SGELLNLPKDTVIKWSVACELIHTASLIHDDIC--DQDEKRRGLTTIWKKYGVPAAICLG 120

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVF 178
           + ++  AF+ +S  +T        Q +L  + ++ ++ ++ GQ+ D  +  + I      
Sbjct: 121 DFIIAQAFQKLSEIETGW-----HQTILLNSLSLSMKKIIVGQVSDVGVDIKKISMKDYE 175

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
            I   KTG L+    +         ++E   L     ++G+ +Q+ +D  + +    KK
Sbjct: 176 QIAYEKTGPLLMTPLDGMFRCKELPESELNGLNKLMNSIGLAYQMINDYKNIKS---KK 231


>gi|297379465|gb|ADI34352.1| octaprenyl-diphosphate synthase [Helicobacter pylori v225d]
          Length = 307

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           N          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  NEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGESIA-QTLSNAVLRLSRGEIEDMFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|328862405|gb|EGG11506.1| hypothetical protein MELLADRAFT_102532 [Melampsora larici-populina
           98AG31]
          Length = 429

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D    RR  P+   ++    +I+AG+ LL  A   ++ 
Sbjct: 166 RLAEISEMIHVASLLHDDV--IDKASSRRSIPSAPHEFGNKLSILAGDFLLARASIGLAR 223

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             +     + S ++ +L       G L     + +       +      +KT +LM    
Sbjct: 224 LGSLEVVELISSIISNLVE-----GELMQLNSNGKSNHQIWNEYLEKSYLKTASLMAKTA 278

Query: 194 ESGAIMAHAS--------QNEKERLRCFGENLGIIFQLADDLLDCEE 232
               ++            +  K+ +  FG++LGI FQ+ DD+LD   
Sbjct: 279 RCATVLGGCGIHQGWEEGEKIKDGVYQFGKHLGIAFQIIDDVLDYTS 325


>gi|309812865|ref|ZP_07706597.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
 gi|308433143|gb|EFP57043.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
          Length = 364

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 35/250 (14%)

Query: 13  SKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NH 69
            +R+   LD  +      +       D +L A+   L GGK++R+  +          + 
Sbjct: 11  LERLQETLDAEVSHQRDVLAPLGGQTDLMLDAVATLLRGGKRVRASFLYWGYRAAGGADS 70

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDE 113
              +R  A++E     +L+HDD+  MD    RRG P  H                 ++ E
Sbjct: 71  DALVRCAASMELFQAAALLHDDV--MDASDTRRGMPAAHRAMAAAHRSRGLDGDADRFGE 128

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             AI+AG+  LT+A E+ ++      +  R + +  L        ++GGQ LD+ +    
Sbjct: 129 AGAILAGDLCLTWADEMYATSGLPADEVARGRAVFDLMRT----QLMGGQFLDVLEASTP 184

Query: 174 E---------TQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                      +   + + K+    M      GA  A AS +  + L  +G  LG  +QL
Sbjct: 185 WATMGTPERIERALRVIRFKSAKYTMEHPLLIGAASAGASPHVTQALSQYGLALGEAYQL 244

Query: 224 ADDLLDCEED 233
            DDLL    D
Sbjct: 245 RDDLLGVFGD 254


>gi|254778946|ref|YP_003057051.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Helicobacter pylori B38]
 gi|254000857|emb|CAX28789.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Helicobacter pylori B38]
          Length = 307

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 14/187 (7%)

Query: 51  KKIRSFLVTECA--SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           K +RS L+          ++   A  + A +E I   SL+HDD+  +D   +RR  P+++
Sbjct: 36  KMLRSKLMLALLDEKTDAISLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSIN 93

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A++ G+   + AF  +S     +   I S  +L L+        +GG      
Sbjct: 94  ALFGNFNAVMLGDVFYSKAFFELSKMGEAIA-QILSNAVLRLSRGEIEDVFVGG------ 146

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
               D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ DDLL
Sbjct: 147 SFNSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKMYADFGLNFGMAFQIIDDLL 203

Query: 229 DCEEDLP 235
           D  +D  
Sbjct: 204 DITQDAK 210


>gi|87311122|ref|ZP_01093246.1| polyprenyl synthetase [Blastopirellula marina DSM 3645]
 gi|87286213|gb|EAQ78123.1| polyprenyl synthetase [Blastopirellula marina DSM 3645]
          Length = 616

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 19/213 (8%)

Query: 42  AIRYALLGGKKIRSFLVTECASLF--------------NVNHLTALRVGAAIECIHCYSL 87
           A+ +   GGK  R F                            +  R   AIE  H  SL
Sbjct: 285 ALDFLARGGKYSRPFTTLAVYDALTGGEGTSAGGAARVGEYSDSVKRTALAIETFHKASL 344

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+   D+   R G  T+H +Y   TAI  G+ ++   + ++S    QL      +++
Sbjct: 345 VHDDIE--DDDAYRYGDVTIHRKYGVPTAINLGDYMIGLGYRLVSRDMAQLGGETAGRII 402

Query: 148 LSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
             L           G      D  D+ +       I  +KT      A + G +++   +
Sbjct: 403 DCLADAHMRLSEGQGAELLWRDAADKSLKPVDALKIYALKTSPAFEAALQCGVLLSGTEE 462

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
           +    +R F  ++G+ FQ+ +DL D   D   K
Sbjct: 463 DYSNSMRQFARHVGVAFQILNDLKDWRGDSDNK 495


>gi|297562507|ref|YP_003681481.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846955|gb|ADH68975.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 380

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 29/250 (11%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQ----HNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            +    ++  L D L +     +        D   + +R+ L GGK++R  L        
Sbjct: 26  ADERSALEASLKDYLERRLRDSEDLDGDFGRDLAGTTVRFTLGGGKRMRPLLAWWGWLAG 85

Query: 66  NVNHL-----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------- 109
                      A +  AA+E +   +L+HDD+  MD    RRG+P+VH            
Sbjct: 86  GGAPSGETARAARQACAAVELVQTCALVHDDV--MDGSPTRRGRPSVHAAHALEHERDGH 143

Query: 110 -----QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                +Y E  A++ G+  L +A ++++     + + +R++ +        + G      
Sbjct: 144 VGDSRRYGEALAVLVGDLALVWADDMLNEALPGVPEPVRARAVWRDLRTEIMAGQFLDVR 203

Query: 165 LDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
              + E   E     +  +KT    +      GA MA A       LR +G ++GI FQL
Sbjct: 204 AQARRER-SEEAALRVDLLKTASYSVERPLHLGAAMAGADPAAVGALRGYGRDVGIAFQL 262

Query: 224 ADDLLDCEED 233
            DDLL    D
Sbjct: 263 RDDLLGVYGD 272


>gi|302560949|ref|ZP_07313291.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
 gi|302478567|gb|EFL41660.1| trans-hexaprenyltranstransferase [Streptomyces griseoflavus Tu4000]
          Length = 354

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 85/223 (38%), Gaps = 16/223 (7%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHL 70
              R+   L D         +   +DR+     + A  GGK++R  LV   A   +    
Sbjct: 36  FQNRLGGALADAERLLRERTRDASDDRVRELTGHLAATGGKRMRPLLVLLAAEFGDPGSE 95

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
              +     E +H  SL HDD+  +D   +R G  + +  +    A   GN LL     +
Sbjct: 96  GVAQAAVVAELVHLASLYHDDV--VDRAAVRHGAASANALWGNRAAAQGGNWLLARGARL 153

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGA 187
            +                   +      ++ GQ+L++             F +   KT A
Sbjct: 154 SADLVPDALAL----------NARTANRIVEGQLLELVGPEPGADPVAHYFRVAAGKTAA 203

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           L+  +   GA  A A +   + L  +GE LG+ FQ+ADDLLD 
Sbjct: 204 LLAMSLGVGAFQAGAPRAAADALVEYGEQLGLAFQIADDLLDL 246


>gi|15644868|ref|NP_207038.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695]
 gi|2313331|gb|AAD07307.1| octaprenyl-diphosphate synthase (ispB) [Helicobacter pylori 26695]
          Length = 307

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L N          A  + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLNEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKAAMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +  ++ S  +L L+        +GG   
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMGESIAKSL-SNAVLRLSRGEIEDVFVGG--- 146

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 147 ---SFNSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKMYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|308182415|ref|YP_003926542.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           PeCan4]
 gi|308064600|gb|ADO06492.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           PeCan4]
          Length = 307

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L N          A  + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLNEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +     S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMGESIA-QTLSNAVLRLSRGEIEDVFVGECF- 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 149 -----NSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|261837687|gb|ACX97453.1| octaprenyl-diphosphate synthase [Helicobacter pylori 51]
          Length = 307

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L N          AL + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLNEKIDAILLDKALNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S    +L     S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMG-ELIAQALSNAVLRLSRGEIEDVFVGECF- 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 149 -----NSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|15920702|ref|NP_376371.1| isoprenyl diphosphate synthase [Sulfolobus tokodaii str. 7]
 gi|15621485|dbj|BAB65480.1| 283aa long hypothetical isoprenyl diphosphate synthase [Sulfolobus
           tokodaii str. 7]
          Length = 283

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 23/227 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L S  +++ + ID ++DD L+            +LL   +Y L  GK+ R  L      
Sbjct: 2   DLLSYWKKSKEIIDKLVDDYLVDIKDW-------QLLEVSKYILKDGKRFRGTLTFLFTE 54

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             N +   A +   A E +H  SL  DD+  +D   IRRG  +    Y     I   N L
Sbjct: 55  ALNGDIKNAYKAALASEILHSASLALDDI--VDYDIIRRGGSSAWAIYTNRKVIFITNYL 112

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           +  A  IIS+     ++ ++  + L     +G           ++D F   ++     ++
Sbjct: 113 IPSALNIISTYG---EEALKISIQLWKDTAVGA----------LKDIFGSPSEYLSTIEL 159

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           KT +L   +    A  A   ++  E     G+ +GI +QL DD +DC
Sbjct: 160 KTSSLFKLSTML-ASFASHREDLVEETLDIGKYIGIAYQLVDDYIDC 205


>gi|317181549|dbj|BAJ59333.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F57]
          Length = 307

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           N          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  NEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S    +L     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMG-ELIAKALSNAVLRLSRGEIEDVFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|308234849|ref|ZP_07665586.1| polyprenyl synthetase [Gardnerella vaginalis ATCC 14018]
          Length = 360

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 40/260 (15%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQ-----TQHNDRLLSAIRYALL---GGKKIRSFLVTE 60
           L      I+T + +L+    + +      +  +  L   ++ A+    GGK++R++L  E
Sbjct: 3   LDSQKSCIETRISELIYDQFNSLACKNLISSCDKTLKDVVKQAISSSEGGKRLRAYLALE 62

Query: 61  CASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---- 110
                  N          L V  A+E     +L+HDD+  +D   +RRG+P+ +      
Sbjct: 63  AFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDI--IDESALRRGRPSAYCALSKA 120

Query: 111 -----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT-HNIGLQGMLGGQM 164
                      ++ G+ L T +F+I     T L++        +    N+G+     GQ+
Sbjct: 121 CNSKHIGIGLGLMLGDILATQSFDITRKACTNLRNPQEVLGEFANMQRNVGI-----GQV 175

Query: 165 LDIQDEFIDE-------TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGE 215
           LD+  E +              + + KT           G + A  ++N   +L    GE
Sbjct: 176 LDLSIEMMSLKNPKKLAESSINVFRWKTASYTTIAPLALGFLSAGLNKNYAIKLANDIGE 235

Query: 216 NLGIIFQLADDLLDCEEDLP 235
            LGI FQ+ADDL+D   D  
Sbjct: 236 PLGIAFQIADDLIDIVSDSA 255


>gi|325111161|ref|YP_004272229.1| hypothetical protein Plabr_4636 [Planctomyces brasiliensis DSM
           5305]
 gi|324971429|gb|ADY62207.1| protein of unknown function DUF116 [Planctomyces brasiliensis DSM
           5305]
          Length = 623

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 88/255 (34%), Gaps = 44/255 (17%)

Query: 23  LLLQTASHMQTQHNDRLLSAIR--------------------YALLGGKKIRSFLVTECA 62
           L+ +       +  DRLL  +R                    +   GGK+ R F+     
Sbjct: 251 LMREGKRLFDPEEYDRLLPPMRVGDKKFANSPVAATERISRDWLANGGKRFRPFITLAAW 310

Query: 63  SLFNVN---------------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              N                      +   AIE  H  SL+HDD+   D+   R G+ T+
Sbjct: 311 DARNGGDATRKDPSSNEPLEVPDAVKKAAIAIEAFHKASLVHDDIQ--DDDEYRYGEETL 368

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H Q+    AI  G+ L+   + +++           S ++  ++  +    +  GQ  ++
Sbjct: 369 HRQHGVGIAINVGDYLIGMGYRLLAECHVADDPMAVSDIVQRMS--LAHIKLCEGQGAEM 426

Query: 168 QDE-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +        +       I  +KT      A  SG  +        E +  F  +LG+ FQ
Sbjct: 427 EWTANPSLNLTPLDAMQIYALKTSPAFEAALYSGLRLGGDVSEYDEMVSTFCRHLGVGFQ 486

Query: 223 LADDLLDCEEDLPKK 237
           + +DL D   D   K
Sbjct: 487 ILNDLKDWRGDSQNK 501


>gi|317177056|dbj|BAJ54845.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori F16]
          Length = 307

 Score =  129 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L N          AL + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLNEKTDAILLDKALNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S    +L     S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMG-ELIAQALSNAVLRLSRGEIEDVFVGECF- 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+      + +    FG N G+ FQ+ D
Sbjct: 149 -----NSDKQKYWRILEDKTAHFIEASLKSMAILL---SKDAKIYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|163785166|ref|ZP_02179857.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879568|gb|EDP73381.1| Polyprenyl synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 111

 Score =  129 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECA 62
            +   L+  ++ I+  L+         +      +L  A+ Y+L  GGK+IR  LV E A
Sbjct: 2   DIKQYLKSQAEFINKHLE-------KELSRGTPQKLFDAMHYSLNAGGKRIRPVLVLESA 54

Query: 63  SLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                N+    + +  A+E IH YSLIHDDLPSMDN  +RRGKPT H  Y E  AI+
Sbjct: 55  KACGKNNLEGIIDIALAVEIIHTYSLIHDDLPSMDNDDLRRGKPTCHKVYGEAVAIL 111


>gi|326774821|ref|ZP_08234086.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
 gi|326655154|gb|EGE40000.1| Dimethylallyltranstransferase [Streptomyces cf. griseus XylebKG-1]
          Length = 349

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A     +   A+    A+E IH +SLIHDD+  MD    RR +PT+  
Sbjct: 60  GKGVRQALAVLGAEAAGGSGADAVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 117

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ L   A   ++            QL         L  ++ GQ  D+  
Sbjct: 118 AYGTGPAVLAGDALFALAVSTLAEAPGPGGAAAVRQL------AGALGDLVHGQAQDLLF 171

Query: 170 EFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           E    T        +   +   KTG+L+  A   GA++A A  +  E L   G ++G+ F
Sbjct: 172 ESRPWTGPGAVLPHEYRSMATHKTGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAF 231

Query: 222 QLADDLLDCEED 233
           Q  DDLL    D
Sbjct: 232 QAVDDLLGIWGD 243


>gi|225021908|ref|ZP_03711100.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945295|gb|EEG26504.1| hypothetical protein CORMATOL_01940 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 368

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 86/218 (39%), Gaps = 32/218 (14%)

Query: 44  RYALLGGKKIRSFLVTECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
            Y L GGK+IR   V               +    LR  +A+E I   +LIHDD+  +D+
Sbjct: 48  NYVLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDI--IDS 105

Query: 98  GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG PTVH                  +    AI+ G+    +A +++ +        
Sbjct: 106 SDTRRGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAAL 165

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGA 197
            R Q             ++GGQ+LDI  E   +  +     + + KT A  +      GA
Sbjct: 166 DRMQPAWRGMRT----EVIGGQLLDIIHEASGDEDIATAQVVNRFKTAAYTIERPLHLGA 221

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +A A       LR +G ++G+ FQL DD L    D  
Sbjct: 222 ALAGADAATIAALRAYGTDIGVAFQLRDDQLGVFGDPG 259


>gi|149199615|ref|ZP_01876648.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155]
 gi|149137268|gb|EDM25688.1| Trans-hexaprenyltranstransferase [Lentisphaera araneosa HTCC2155]
          Length = 326

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 24/228 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
            G   + L+E ++ I   L     QT+    T    R           GK++R  LV   
Sbjct: 13  TGKYATSLEECNELIQDTLKSSAPQTSDLAITLKKSR-----------GKQLRPLLVFTI 61

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                    +A ++ A  E IHC SL+HDD+  +D+  +RR  PT++  +D   A++ G+
Sbjct: 62  L----GQQTSANKLAAVCESIHCASLVHDDI--IDDCRLRRNLPTMNSIHDNSIALLLGD 115

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            + T  F  +SS       +  +Q + +L     L      Q     D  + + Q   + 
Sbjct: 116 LMFTSIF-TLSSCLPSWVTSESAQTIKTLIEGELL------QQTYKCDIAVTKDQYLDVL 168

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           + KTGAL+ F  ++ + +A  + ++ +    +    G+IFQ+ADD  D
Sbjct: 169 QKKTGALLSFCTKAASRLADKNPDDVQLAGEYANTFGLIFQIADDWAD 216


>gi|145641598|ref|ZP_01797175.1| geranyltranstransferase [Haemophilus influenzae R3021]
 gi|145273645|gb|EDK13514.1| geranyltranstransferase [Haemophilus influenzae 22.4-21]
          Length = 163

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/135 (45%), Positives = 80/135 (59%), Gaps = 6/135 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G    +LQ+   RI+  L+       SH     N  LL A++YALL GGK++R FLV   
Sbjct: 2   GHFSEELQQVQTRINRFLEAQFEGIESH-----NAPLLEAMKYALLLGGKRVRPFLVYAT 56

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +      T     AAIE IH YSLIHDDLP+MD+  +RRG PT HIQ+DE TAI+AG+
Sbjct: 57  GQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGD 116

Query: 122 GLLTYAFEIISSPKT 136
            L ++AFEI++    
Sbjct: 117 ALQSFAFEILTKTPN 131


>gi|67906783|gb|AAY82846.1| predicted geranylgeranyl pyrophosphate synthase CrtE [uncultured
           bacterium MedeBAC46A06]
          Length = 344

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 10/215 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            I+ D +++    M         +A  +    GK +R+ +    A L  V+   AL   A
Sbjct: 30  EIIHDFIIE---RMPQAGQPLAEAAAHHFASPGKMLRAKMALSAADLLKVDRPAALHWAA 86

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE +H  SLIHDD+   D   +RRG+P V  Q+    A+  G+ L+  +FE+ +    +
Sbjct: 87  AIEVLHNASLIHDDIC--DGDRLRRGRPAVWSQFGRDVALTLGDWLVALSFELAAEAAQR 144

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
            +  +  +++ +      L G      L       D          KT  L+    E  A
Sbjct: 145 AQTPMLVKILATHMKTTTL-GEAREFDLQ---PVTDWQHYLQGAGDKTAPLLTAPIEGVA 200

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            MA           CF   LG  +Q+ +D+L+   
Sbjct: 201 TMALHGGAAPTIGACF-RALGNAYQIGNDILNFSG 234


>gi|297159283|gb|ADI08995.1| putative polyprenyl diphosphate synthase [Streptomyces
           bingchenggensis BCW-1]
          Length = 380

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 16/198 (8%)

Query: 39  LLSAIRYALLGG-KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A ++ +  G K++R  LV   A   + +    +     +E  H  +L HDD+  +D+
Sbjct: 42  ITEAAQHLVRAGAKRLRPLLVLLAARFGDPDAPGVVPSAVVVELTHLATLYHDDV--LDD 99

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RR  P     +D   A++ G+ L   A  +++    +                   +
Sbjct: 100 ADARRRTPATDANWDNSVAVLTGDFLFARASHLLADLGPEAV----------RIQADAFR 149

Query: 158 GMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
             + GQ+L+      D         +   + G+L+  +   GA+ + A +     L  +G
Sbjct: 150 QQVTGQILETAGPSGDRDPIEHYLEVLAGRAGSLIAVSGRLGALASGAGREVAGVLARYG 209

Query: 215 ENLGIIFQLADDLLDCEE 232
           E LG+  +LA+D+LD  E
Sbjct: 210 ERLGVACRLAEDVLDIAE 227


>gi|289804959|ref|ZP_06535588.1| octaprenyl diphosphate synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 235

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 9/143 (6%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              +RRGK T +  +    +++ G+ + T AF++++S  +     ++   ++S   N+  
Sbjct: 1   ESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS-----LKVLEVMSEAVNVIA 55

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +G +  Q++++ D  I E     +   KT  L   A +   I+A  +  +++ L+ +G  
Sbjct: 56  EGEVL-QLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEQEKGLQDYGRY 114

Query: 217 LGIIFQLADDLLDCEED---LPK 236
           LG  FQL DDLLD   D   L K
Sbjct: 115 LGTAFQLIDDLLDYSADGEHLGK 137


>gi|317008891|gb|ADU79471.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           India7]
          Length = 307

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +LQ    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLQAIQNKITSWIKEIESSFIDALFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  DEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +   I S  +L L+        +G      +    D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGEAIA-QILSNAVLRLSRGEIEDVFVG------ESFNSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   M  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFMEASLKSMAILLN---KDTKIYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|168020145|ref|XP_001762604.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686337|gb|EDQ72727.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 340

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 29/199 (14%)

Query: 50  GKKIRSFLVTECAS-------------LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           GK+ R  ++   ++             +F+       R+   IE IH  SL+HDD+  +D
Sbjct: 48  GKRFRPTVLLLMSTLLMTSPAHGLQDLIFDDLRFRQQRIAEIIEMIHVASLLHDDV--LD 105

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +   RRG  +++        + A   LL  A   +SS +      + SQ++         
Sbjct: 106 HADTRRGISSLNHAMGNK--VCAAIFLLARASVTLSSLRNTQVVELLSQVL--------- 154

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK---MKTGALMCFACESGAIMAHASQNEKERLRCF 213
           + ++ G+++ +  E+ + +   +I      KT +LM  +C+S A++A   +    R   +
Sbjct: 155 EHLVTGEIMQLSSEYKNMSNFDVISWKTFYKTASLMANSCKSIAVLAGQPEEVANRAFDY 214

Query: 214 GENLGIIFQLADDLLDCEE 232
           G +LG+ +QL DD L+   
Sbjct: 215 GRHLGLAYQLVDDALNYTG 233


>gi|217077572|ref|YP_002335290.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B]
 gi|217037427|gb|ACJ75949.1| geranylgeranyl diphosphate synthase [Thermosipho africanus TCF52B]
          Length = 338

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 33/247 (13%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
                 + + K+++  ++ ++L+   +   Q    + + I Y L  GK+IR  L    A+
Sbjct: 2   DFNEFKKMHQKKVEEYIEKVILENKVNPPKQIESLIRTLIEYCLRPGKRIRPLLFLLGAT 61

Query: 64  LF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------- 109
            +    +++    R+ A IE +HC+ LIHDD+  MD   +RRG P++H+           
Sbjct: 62  SYAKKELDYEKLYRIAAVIEIMHCFLLIHDDI--MDRSALRRGLPSLHVVFYEEFKEKNN 119

Query: 110 --QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             +  E  A++ G+ L   A   +S        N+ S+ +   ++     G   GQ LD+
Sbjct: 120 NEKIGEDLALVFGDILFFIAIRQLSKL------NLSSKFLEEFSNCYINTG--YGQTLDV 171

Query: 168 QDE----FIDETQVF-MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                    DE ++   I ++KT      +    G ++++    +K+++       GI F
Sbjct: 172 LYSLGKYKPDEDKISVEIARLKTAYYTFFYPFYLGVLLSN-ENIDKKKIEDAIIPAGIAF 230

Query: 222 QLADDLL 228
           Q+ DD++
Sbjct: 231 QIRDDII 237


>gi|310824306|ref|YP_003956664.1| geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397378|gb|ADO74837.1| Geranylgeranyl pyrophosphate synthetase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 366

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 13/237 (5%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL- 64
           + LQ    +I+  L +L  L   + + ++    ++    YAL   K++R  LV     L 
Sbjct: 25  TWLQLVQAQIEASLAELFELPDEACLDSRWKQAMVRTRAYALRPAKRLRPVLVVAGYHLT 84

Query: 65  --FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-----QYDEVTAI 117
                      +  A +E +H + LIHDD+   D   +RRG   +H      +  E  A+
Sbjct: 85  RGGAGVPPGLWQFAAGLELLHTFLLIHDDVA--DRADLRRGGAALHHLLAPGRAGEDLAV 142

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L   A E +     +       Q  L++  +      L   +       +   Q 
Sbjct: 143 VVGDHLFARAMEAMLGSGLRGAAKA-CQYYLAVCRHTAAGQYLDLDLSRAALADVGLFQA 201

Query: 178 FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +  +KT     C     GAI+A A +   + L   G   G+ +QL DD+L    D
Sbjct: 202 LRVAHLKTARYGFCAPLVCGAILAEADEALCQGLERVGRYGGLAYQLRDDVLGLFGD 258


>gi|29420495|dbj|BAC66492.1| farnesyl diphosphate synthase [Streptomyces argenteolus]
          Length = 346

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 11/188 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK IR  LV   A         AL    A+E  H +SL+HDD+  MD    RR +PT  
Sbjct: 61  GGKAIRPALVLLAAEAVGGAADAALPAAVAVELAHNFSLLHDDV--MDGDRTRRHRPTAW 118

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+AG+ LL  AF+++++               +      +Q +L GQ  D+ 
Sbjct: 119 TVFGVSPAILAGDALLALAFDVLATAGHPAAPEA------TRIFGAAIQELLEGQNADMA 172

Query: 169 DEFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   + ++     +   KTGAL+  AC  GA++   +  + E LR FG +LG+ FQL D
Sbjct: 173 FERRQDVELAECLVMAAGKTGALLGCACALGALLGGGAPEQVEHLRAFGRDLGLAFQLVD 232

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 233 DLLGIWGD 240


>gi|193084129|gb|ACF09795.1| octaprenyl-diphosphate synthase [uncultured marine group III
           euryarchaeote SAT1000-53-B3]
          Length = 325

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 21/233 (9%)

Query: 6   PSKLQEN---SKRIDTILDDLLLQTASHMQ---TQHNDRLLSAIRYALLGGKKIRSFLVT 59
            ++L+EN   S+ ++    ++  +   HM+   ++ +  L   I   +  GK++R  L  
Sbjct: 4   STRLKENLIISENLNDYYKEVRAEFQRHMKREISKESKDLAPLIEKGVGDGKQLRPVLCR 63

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             +     +   A   G A+E IHC +LIHDD   +D    RR  P +  +    TA++ 
Sbjct: 64  LVSDSLGGDAHLAFECGMALELIHCGTLIHDD--WLDGDKFRREAPALWKELGPRTAVLV 121

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-EFIDETQVF 178
            + ++       +      K   R    L+            G + D  D E   E+   
Sbjct: 122 ADLMIATGSLHGAISLATGKSLARCARNLT-----------EGAIADFTDKENYSESVYL 170

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              K KTGAL   A E GA+++    +    +  FGE +GII+Q+ DD LD  
Sbjct: 171 HRIKKKTGALYSTAAELGALIS-PRTDLALPMHKFGETVGIIYQITDDYLDLM 222


>gi|320006988|gb|ADW01838.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 351

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 93/248 (37%), Gaps = 24/248 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           + E  +R+D +L   + + A          D +   +  +   GK++R+           
Sbjct: 8   MAEFKERVDDVLRVFVAREAERFAAVDPVLDPVAGQLESSAAHGKRLRAAFCYWGWRATG 67

Query: 67  -VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-------------YD 112
             +  + +R  A++E +H  +++HDDL  +D+  +R G PT H+                
Sbjct: 68  QPDDESLVRAAASMELVHAAAVVHDDL--IDDSPLRHGLPTAHMALRGAARGRPRSVSAG 125

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              A++ G+ L+  A ++ ++         R++ + S      + G     +        
Sbjct: 126 RSLAMLVGDLLMGLAGQLFATSGLPAAYLARARPLWSALARDLIAGECLEILRTGAAP-- 183

Query: 173 DETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           D      + + KT    +      G  +A A +  +     +G  LG  FQL DDL+   
Sbjct: 184 DTADSLKVIRYKTAKYTVEQPLLIGGALAGAGERVRSGYSAYGLPLGEAFQLRDDLVGLF 243

Query: 232 E---DLPK 236
               D  K
Sbjct: 244 GSPQDTGK 251


>gi|328880104|emb|CCA53343.1| Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl
           pyrophosphate synthetase [Streptomyces venezuelae ATCC
           10712]
          Length = 350

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 24/246 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
               +++ E   R      DLL      +     +RL  A    +  GK++R+       
Sbjct: 8   AAFKARVDEVLHRFVADEADLLAAVDPALAPV-AERLEEA----VAVGKRLRAAFCYWGW 62

Query: 63  SLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT------ 115
                 +    LR  A++E +H  +++HDDL  +D+  +R G+PT H+            
Sbjct: 63  RATRQPDSDALLRAAASMELVHAAAVVHDDL--IDDSPLRHGRPTAHVALGAAVRHHPRA 120

Query: 116 -------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  A++ G+ L++ A ++ ++         R++ + +      + G     +    
Sbjct: 121 ADAARSLAMLVGDLLMSLAGQLFATSGLPAAYLGRARPLWAALARDLIAGECLEILHTGG 180

Query: 169 DEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               D      + + KT    +      G  +A A +  +E    +G  LG  FQL DDL
Sbjct: 181 AP--DTAASLKVIRYKTAKYTVEQPLLIGGALAGAGERLREGFSAYGLPLGEAFQLRDDL 238

Query: 228 LDCEED 233
           L    D
Sbjct: 239 LGLFGD 244


>gi|332673082|gb|AEE69899.1| polyprenyl synthetase [Helicobacter pylori 83]
          Length = 307

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           N           L + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  NEKTDAILLDKVLNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S    +L     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMG-ELIAKALSNAVLRLSRGEIEDVFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKMYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|315586238|gb|ADU40619.1| polyprenyl synthetase [Helicobacter pylori 35A]
          Length = 307

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLKAIQNKIASWIKEIESAFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +          AL + A +E I   SL+HDD+  +D   +RR  P+++  +    A+I G
Sbjct: 48  DEKTDAILLDKALNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVILG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S    +L     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMG-ELIAKALSNAVLRLSRGEIEDVFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|28493184|ref|NP_787345.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str.
           Twist]
 gi|28476225|gb|AAO44314.1| geranylgeranyl pyrophosphate synthase [Tropheryma whipplei str.
           Twist]
          Length = 379

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 40/247 (16%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-- 73
           ++T +   +L   +   ++H + +   ++    GGK++R+ L    A             
Sbjct: 32  VNTKISRFILNNKT---SKHTESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENLFEL 88

Query: 74  --RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVT 115
              +  AIE  H  +L+HDDL  +D    RRG P VH ++                   +
Sbjct: 89  ISDIAVAIELFHAAALVHDDL--IDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTAS 146

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----------LMLSLTHNIGLQGMLGGQML 165
           AI+AG+ LL ++     S    L +    Q          ++     N  + G     + 
Sbjct: 147 AILAGDMLLVWSSRFFYSALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLH 206

Query: 166 DIQDEFIDETQVF----MIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGII 220
           + +   +   +       I   K+G   +      GA    A+    E L+ F   +G+ 
Sbjct: 207 EHRWRQLSVQEALDISKEIMIKKSGKYSVQVPLCLGANTNGATIEHLEVLKRFSLPIGLA 266

Query: 221 FQLADDL 227
           FQ+ +D+
Sbjct: 267 FQMRNDI 273


>gi|256371287|ref|YP_003109111.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007871|gb|ACU53438.1| Polyprenyl synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 362

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 96/250 (38%), Gaps = 31/250 (12%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQT---QHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           P  L   ++ ++  L  LL   A+  +    +  +      R    GGK++R  L    A
Sbjct: 16  PEVLGAPTRLVEARLGHLLDAEAARWRAIDERFAEPFDELSRLTRAGGKRLRPALAFWAA 75

Query: 63  SLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------- 110
               V+    L   +  AIE +H ++L+HDD+  MD   +RRG  TVH +          
Sbjct: 76  RGLGVDGDDELLGDLLVAIELLHTFALVHDDI--MDRSELRRGAVTVHARARDEHRSLKL 133

Query: 111 ------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                 Y +   I+ G+  LT A   + +    ++    +QL L +     L  +   Q+
Sbjct: 134 RGEAETYGDAIGILVGDLALTLADGALEAAPLPVRATF-TQLKLEVNLGQYLDVVASAQL 192

Query: 165 LDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            D             I   K+    +      GA++A  +      L  F   LG+ FQL
Sbjct: 193 FD------TPEHAEHIALFKSAKYTVERPLHLGALLADPADGVLAALSRFALPLGLAFQL 246

Query: 224 ADDLLDCEED 233
            DD+L    D
Sbjct: 247 RDDVLGVFGD 256


>gi|208434187|ref|YP_002265853.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27]
 gi|208432116|gb|ACI26987.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori G27]
          Length = 307

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L +          A  + A +E I   SL+HDD+  +D   IRR  P
Sbjct: 36  KMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATIRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +   I S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMGESIA-QILSNAVLRLSRGEIEDVFVG---- 145

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +    D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 146 --ESFNSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKMYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|242078453|ref|XP_002443995.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor]
 gi|241940345|gb|EES13490.1| hypothetical protein SORBIDRAFT_07g005530 [Sorghum bicolor]
          Length = 365

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 87/231 (37%), Gaps = 28/231 (12%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG---KKIRSFLVTE 60
            LP       + +  + + L       M       L SA  Y    G   K+    ++  
Sbjct: 58  ELPDPFALIKEEVSEVTNRL-----RSMVVAEVPELTSAAGYFFRAGAEGKRTCPTVLLL 112

Query: 61  CASLF------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            AS              N      +RV    E IH  SLIHDD+  +DN   RRG  +++
Sbjct: 113 MASAISTDMSDPIVGSENKPRARHMRVAEITEMIHISSLIHDDV--LDNADTRRGMDSLN 170

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
               +  A++AG+ LL  AF    +      DN     +L+   N  + G L  Q+    
Sbjct: 171 FTVGKKLAVLAGDFLLFRAFSAAVAL-----DNTEVVSLLATAVNNLVTGELM-QLTITP 224

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            +             KT AL+  +C++ A+++  +   +     +G +LGI
Sbjct: 225 AQRCSMDYYLQKTYYKTAALISNSCKAIAVLSGQTTEVQALAYQYGRHLGI 275


>gi|289157786|gb|ADC84423.1| geranylgeranyl diphosphate synthase [Vibrio campbellii]
          Length = 287

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 20/235 (8%)

Query: 1   MNGGLPSKLQENSKRID-TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           MN    S+ + + KRI     ++ LL   S  Q  H         + + GG +IR  +  
Sbjct: 1   MNSS--SRSKASQKRITYQDCEEFLLSVVSGNQPAH--------YHLMTGGSRIRMRVCL 50

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           + +    +N   A+R+ +A+E +H  SLIHDD+   D   +RRG+  V +++    AI  
Sbjct: 51  DMSLCLGLNDEDAMRLASAVELLHNASLIHDDIQ--DGDSLRRGQSAVWVKFGTNVAICT 108

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVF 178
           G+ L+  AF I+++  +    N+  QL+ +  + + +   + GQ  D    E I      
Sbjct: 109 GDYLIARAFGILANISS---PNVLPQLLEATQNAVSVT--VEGQNADLTAKEHISPQNYE 163

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I + K G L+  + E   I +    NE    R    +L I +Q+ DD+ D  ED
Sbjct: 164 SIAEKKAGPLLALSLELPLISSG-RLNEIPTARHAASSLAIAYQILDDIKDSVED 217


>gi|323127266|gb|ADX24563.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 332

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 87/219 (39%), Gaps = 7/219 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNVNHLTALR 74
           I+  L  +     S M +   D   + + Y    GK +R+ L       +        L 
Sbjct: 12  IEEALVSVKHIMISEMSSLPPDIKTTILDYINASGKYLRAGLCLYLEKEIQGEISQGKLY 71

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + AAIE  H  +LIHDD+  +D   +RR    +H  Y    AI AG+ LL+YA  + +  
Sbjct: 72  LAAAIETFHLATLIHDDV--IDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLATRG 129

Query: 135 KTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
              L      +    +        L G L  Q+++  +  +         K KT  L   
Sbjct: 130 AQLLNIKDNWEDNGPLPYHVVERILAGELA-QLMNQHNSQMTMKAYLKQIKGKTAFLFGL 188

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AC+ G       Q   +     G  LG+ FQL+DDL+D 
Sbjct: 189 ACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLIDY 227


>gi|88856502|ref|ZP_01131159.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium
           PHSC20C1]
 gi|88814156|gb|EAR24021.1| geranylgeranyl pyrophosphate synthase [marine actinobacterium
           PHSC20C1]
          Length = 372

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 53/272 (19%)

Query: 9   LQENSKRIDTI---LDDLLLQTASHMQTQHNDRLLSAIRYA----LLGGKKIRSFLVTEC 61
           + E+++ +D +   +D+ L +  S + +   +  L+A+       L GGK+ R+      
Sbjct: 1   MPESNQLVDLVQLKIDEFLAEKQSELNSIAPE--LTAMTDVGGSLLSGGKRFRALFCYWG 58

Query: 62  ASLFNV---------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
                                     L   +A+E  H  +L+HDD+  MD    RRG P+
Sbjct: 59  WQAVAGLPSSTGPLDSEVKSEELPGVLLSASALELFHAAALVHDDI--MDRSDTRRGSPS 116

Query: 107 VHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
            H +                Y +  A++ G+ LL ++ E++      L            
Sbjct: 117 AHRRFEQMHRDGAWTGNAETYGQSAALLLGDLLLGWSDELLGRGLAMLPRPAALAARREF 176

Query: 151 THNIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKTGALMCFACES----GAIMAH 201
                   ++ GQ LDI DE     + +   +   Q++       ++ E+    GA +  
Sbjct: 177 M--TMRTEVMAGQYLDIHDESAWASYPESEALDRAQRVLIYKSAKYSVEAPLAVGASLGA 234

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++ +   LR FG  LG+ FQL DD+L    D
Sbjct: 235 GTEEQIAALRAFGLPLGVAFQLRDDVLGIFGD 266


>gi|256377875|ref|YP_003101535.1| polyprenyl synthetase [Actinosynnema mirum DSM 43827]
 gi|255922178|gb|ACU37689.1| Polyprenyl synthetase [Actinosynnema mirum DSM 43827]
          Length = 361

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 92/251 (36%), Gaps = 34/251 (13%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-----ECASL 64
           +    R+D  L++     A        + +      ++L GK++R             + 
Sbjct: 15  EAVVPRLDAALEEFFA--ARPDAGLAPELVGEISELSVL-GKRVRPIFAWCGWLAAGGAE 71

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV----------------H 108
                   +R   A+E +   +L+HDD+  MD    RRG+                    
Sbjct: 72  TGPESDAVVRALVALELLQVCALVHDDV--MDRSTTRRGRAAAHVAFAARHRRLRWSGDP 129

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y +  A++ G+  L ++ + I +   +     R+     +        M+ GQ LD+ 
Sbjct: 130 KHYGDCAAVLVGDLALAWSDDAIVTAGLEPAALSRA----WVAWQAMRVEMMAGQHLDLL 185

Query: 169 DEFIDETQVF---MIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                E  +     +  +KT A  +      GA MA A     E LR FG ++G+ FQL 
Sbjct: 186 AGARREESLEQALRVAALKTAAYTVERPLHLGAAMAGAGPELVEALRSFGRDIGVAFQLR 245

Query: 225 DDLLDCEEDLP 235
           DDLL    D  
Sbjct: 246 DDLLGVFGDPG 256


>gi|317012084|gb|ADU82692.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase) (OPP synthetase) [Helicobacter pylori
           Lithuania75]
          Length = 307

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L +             + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLDEKTDAISLDKVFNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +   I S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMGEAIA-QILSNAVLRLSRGEIEDVFVG---- 145

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +    D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 146 --ESFNSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|182434309|ref|YP_001822028.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178462825|dbj|BAG17345.1| putative polyprenyl diphosphate synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 349

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 16/192 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L    A     +   A+    A+E IH +SLIHDD+  MD    RR +PT+  
Sbjct: 60  GKGVRQALAVLGAEAAGGSGADAVLGAVAVELIHTFSLIHDDI--MDGDETRRRRPTLWK 117

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A++AG+ L   A   ++            QL         L  ++ GQ  D+  
Sbjct: 118 AYGTGPAVLAGDALFALAVSTLAEAPGPGGAAAVRQL------AGALGDLVHGQAQDLLF 171

Query: 170 EFIDET--------QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           E    T        +   +   KTG+L+  A   GA++A A  +  E L   G ++G+ F
Sbjct: 172 ESRPWTGPGAVLPHEYRSMATHKTGSLLGCAAALGAVLAGAPASTVEALDLAGRHVGVAF 231

Query: 222 QLADDLLDCEED 233
           Q  DDLL    D
Sbjct: 232 QAVDDLLGIWGD 243


>gi|254439146|ref|ZP_05052640.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
 gi|198254592|gb|EDY78906.1| polyprenyl synthetase superfamily [Octadecabacter antarcticus 307]
          Length = 286

 Score =  128 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 21/225 (9%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLT 71
            + +D  +D LLL  +S        R+  A RY    GG ++R+ L  + A+  N++   
Sbjct: 15  LRDVDAQIDRLLLPNSS--------RVADAARYHFSAGGARVRARLGLDAAAALNLSPQA 66

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           +L    A E +H  SL+HDDL   D   +RRGKP+V  ++ +  AI  G+ L++ A+  I
Sbjct: 67  SLACAIAPELLHNASLVHDDLQ--DGDAMRRGKPSVWSRFGKDIAISTGDLLISAAYMAI 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           ++             +     +  +   + GQ  D +           I   K+G L+  
Sbjct: 125 AAHPYPA--------LALRAMHDAVLYTIDGQTQDCRSTQPTPEAYVNIAANKSGPLLAL 176

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                 I A A    +E +   G  L + +Q  DD++D  +DL K
Sbjct: 177 PIRLALIAAQAPG--QETVVHAGRALAVAYQTLDDIMDRADDLAK 219


>gi|322411728|gb|EFY02636.1| geranylgeranyl pyrophosphate synthase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 332

 Score =  128 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 87/219 (39%), Gaps = 7/219 (3%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNVNHLTALR 74
           I+  L  +     S M +   D   + + Y    GK +R+ L       +        L 
Sbjct: 12  IEEALVSVKHIMISEMSSLPPDIKTTILDYINASGKYLRAGLCLYLEKEIQGEISQGKLY 71

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           + AAIE  H  +LIHDD+  +D   +RR    +H  Y    AI AG+ LL+YA  + +  
Sbjct: 72  LAAAIETFHLATLIHDDV--IDEAELRRNIKPLHQVYSNKIAIYAGDYLLSYAGRLATRG 129

Query: 135 KTQLKDNIRSQ---LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
              L      +    +        L G L  Q+++  +  +         K KT  L   
Sbjct: 130 AQLLNIKDNWEDNGPLPYHIVERILAGELA-QLMNQHNSQMTMKAYLKQIKGKTAFLFGL 188

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AC+ G       Q   +     G  LG+ FQL+DDL+D 
Sbjct: 189 ACQLGTWYPKIPQKTSKAAYQLGIFLGMAFQLSDDLIDY 227


>gi|46200288|ref|YP_005955.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27]
 gi|46197916|gb|AAS82328.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB27]
          Length = 330

 Score =  128 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 83/225 (36%), Gaps = 17/225 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I   L + LL    H    + D L     Y   GGK +R  L    A          L
Sbjct: 6   EAIRQALQERLLARLDHPDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E    + L+HDD+   D    RRG+P +H  +    A+ AG+ +    + +++ 
Sbjct: 63  EAATALELFQNWILVHDDIE--DGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAE 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKTG-A 187
               L   +    +L   H + ++    GQ LD+         +     F +   K    
Sbjct: 121 ---GLARGLFPPEVLLEFHEV-VRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYY 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   GA++A  +          G  LG  FQ+ DD+L+ E 
Sbjct: 177 TAVAPLRLGALLAGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEG 219


>gi|282861732|ref|ZP_06270796.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282563548|gb|EFB69086.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 350

 Score =  128 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 91/240 (37%), Gaps = 20/240 (8%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
             R+D +L   + +  + +     +   +   +R A   GK++R+               
Sbjct: 13  KDRVDAVLRGFVDEETALLLAVDAELAPVAEQLRTATAYGKRLRAAFCYWGWRAAGQPDS 72

Query: 71  TAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT------------AI 117
            AL R  AA+E +H  +++HDDL  +D   +R G PT                     A+
Sbjct: 73  DALVRAAAAMELVHAAAVVHDDL--IDGSALRHGLPTAQFALRAAVSGRRRPAAARSLAL 130

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ L+++A ++  S         R++ + +      + G      +       D    
Sbjct: 131 LVGDLLMSWAGQLFVSSGLPAAYLSRARPLWAALARELIAGECL--EILRTGAVPDVRDS 188

Query: 178 FMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
             + + KT    +      G  +A AS + +E    +G  LG  FQL DDLL    +  +
Sbjct: 189 LKVIRYKTAKYTVEQPLLIGGALAGASPDLREAFSDYGLPLGEAFQLRDDLLGLFGETAR 248


>gi|111221595|ref|YP_712389.1| geranylgeranyl pyrophosphate synthase [Frankia alni ACN14a]
 gi|111149127|emb|CAJ60810.1| Geranylgeranyl pyrophosphate synthase (Farnesyl diphosphate
           synthase, Bifunctional short chain isoprenyl diphosphate
           synthase) [Frankia alni ACN14a]
          Length = 358

 Score =  128 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 98/259 (37%), Gaps = 40/259 (15%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDR---LLSAIRYALLGGKKIRSFLVTECAS-L 64
           + +   R+  +L        + ++    D    +  A    L GGK++R           
Sbjct: 1   MTDVRPRVSAVLRRFADARGAALRDIDADLDPFVRVAEDVLLSGGKQVRPAFCYWGWRGA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-------------- 110
              +    +   AA+E +H  +L+HDD+  MD   +RRG P+   +              
Sbjct: 61  GGPDCDEIVTAAAALEVLHACALVHDDV--MDGSQLRRGAPSAQRRLTLVHRRARLGGDP 118

Query: 111 --YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    AI+ G+  LT+A +++ +         R+      T+      ++ GQ LD+ 
Sbjct: 119 DTFGRSAAILLGDLFLTWADDLLMASGLTPGALARA----WPTYARMRGELVAGQYLDLA 174

Query: 169 DE-------------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFG 214
            +              +D  +V  I + KT    +    + GA++A +     E    FG
Sbjct: 175 SQVGPGASQGGAGGGQVDPARVARIARYKTAGYTVVRPLQLGALLAGSRPGLLETYAAFG 234

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG  FQL DD+L    D
Sbjct: 235 HPLGEAFQLRDDVLGVFGD 253


>gi|15639670|ref|NP_219120.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025908|ref|YP_001933680.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           SS14]
 gi|2072008|gb|AAB53642.1| octaprenyl-diphosphate synthase [Treponema pallidum]
 gi|3322980|gb|AAC65646.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018483|gb|ACD71101.1| octaprenyl-diphosphate synthase [Treponema pallidum subsp. pallidum
           SS14]
          Length = 364

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 44/258 (17%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL----------GGKKIR 54
           +   L +  + I+  L D L    +        R+L++    +L          GGK+ R
Sbjct: 1   MKRALAQRLRNIERALADALPAQPTRSWMGTRLRVLASEDTRVLRTVCNACVSCGGKRWR 60

Query: 55  SFLVTECASLFNV-----------------NHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
             L+   A L +                  +      + A +E IH  SL+HDD+   D+
Sbjct: 61  PLLLILSAELAHACVQCTHRKLQGHKRKKISEREWYTLSAVVELIHTASLLHDDIE--DH 118

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRGKP  +++Y     + A + L  +A  +I +    ++  +++ L  +        
Sbjct: 119 SSTRRGKPCAYLRYGTDCVLNAASWLYFHAHALIDTL--SIEPALKAALFSATISATRAL 176

Query: 158 GMLGGQMLDIQDEFIDE-----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
            M  GQ LDI      E      Q   +  +KTGAL+  + E G + A  S  E    R 
Sbjct: 177 HM--GQALDIAWHRSPELIPSRAQYLRMVALKTGALIALSGELGFLCAGYSAREA---RS 231

Query: 213 FG---ENLGIIFQLADDL 227
           FG     +GI FQ+ DD+
Sbjct: 232 FGAQVMPIGIGFQILDDV 249


>gi|305681416|ref|ZP_07404223.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
 gi|305659621|gb|EFM49121.1| polyprenyl synthetase [Corynebacterium matruchotii ATCC 14266]
          Length = 362

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 86/218 (39%), Gaps = 32/218 (14%)

Query: 44  RYALLGGKKIRSFLVTECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
            Y L GGK+IR   V               +    LR  +A+E I   +LIHDD+  +D+
Sbjct: 48  NYVLTGGKRIRPCYVWAGFVAGGGLRNRGEDPAAVLRAASALELIQACALIHDDI--IDS 105

Query: 98  GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG PTVH                  +    AI+ G+    +A +++ +        
Sbjct: 106 SDTRRGNPTVHRSAQRRHEEGRWHGDADHFGCSVAILVGDLAFAWADDMVRAAGLSHAAL 165

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGA-LMCFACESGA 197
            R Q             ++GGQ+LDI  E   +  +     + + KT A  +      GA
Sbjct: 166 DRIQPAWRGMRT----EVIGGQLLDIIHEASGDEDIATAQVVNRFKTAAYTIERPLHLGA 221

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +A A       LR +G ++G+ FQL DD L    D  
Sbjct: 222 ALAGADAATIAALRAYGTDIGVAFQLRDDQLGVFGDPG 259


>gi|271966484|ref|YP_003340680.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM
           43021]
 gi|270509659|gb|ACZ87937.1| octaprenyl-diphosphate synthase [Streptosporangium roseum DSM
           43021]
          Length = 322

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 16/205 (7%)

Query: 30  HMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            +     + + + +R    G GK +R  L+   A     +H   +R+GA +E IH  SL+
Sbjct: 27  RLADGLPEPVRAPVRTLAAGPGKFVRPRLLAAGAGFGTADHDRLVRLGALVELIHLASLL 86

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRG P  H       A++AG       F ++ +    L + +      
Sbjct: 87  HDDV--IDEAETRRGAPAAHTAVGTEQAMLAG----LACFALVGTEAADLGEGV------ 134

Query: 149 SLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           +   ++ +  +  G++LD++   D          + + KT  L    C  GA  A +   
Sbjct: 135 AGAVSMAVAKLAYGELLDVERAFDTAFPLPAYLELVQSKTAELFRLCCLLGAAEARSGHG 194

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
           E + L  FG  LG+ FQ+ DD LD 
Sbjct: 195 EADALVRFGTALGVTFQILDDCLDL 219


>gi|46015921|pdb|1V4H|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima F52a Mutant
          Length = 299

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L    A    V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSAKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|207093075|ref|ZP_03240862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 270

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L +          A  + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLDEKTSTILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +     S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMGESIA-KALSNAVLRLSRGEIEDVFVGECF- 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+        +    FG N G+ FQ+ D
Sbjct: 149 -----NSDKQKYWRILEDKTAHFIEASLKSMAILL---DKNAKIYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|148235461|ref|NP_001090113.1| farnesyl diphosphate synthase [Xenopus laevis]
 gi|76779745|gb|AAI06511.1| MGC131256 protein [Xenopus laevis]
          Length = 348

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 89/248 (35%), Gaps = 17/248 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
           MN  + S+ QE S   + I+ DL  +   H +      RL   + Y   GGK  R   V 
Sbjct: 1   MNSHMGSERQEFSSYFEQIVQDLTSEDLGHPEVGDAITRLKEVLEYNTPGGKCNRGVTVL 60

Query: 60  ECA-SLFN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                L         N   AL VG  +E +  + L+ DD+  MDN   RRG+P  + +  
Sbjct: 61  ASYKELVGPELQKDGNLQRALAVGWCVELLQAFFLVADDI--MDNSVTRRGQPCWYRKEG 118

Query: 113 EVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDI 167
               A+     L    + I+          +    +   T      G    ++  Q   +
Sbjct: 119 IGLDAVNDSFLLEAGIYRILRKYCRGKPYYLSLLELFLETSYQTELGQALDLITAQPGKV 178

Query: 168 QDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLAD 225
                 E +   I K KT          +   MA  A + E +  +     +G  FQ+ D
Sbjct: 179 DLNRYTEKRYKAIVKYKTAFYSFYLPVAAAMYMAGIAGEAEHKNAKTILLEMGEFFQIQD 238

Query: 226 DLLDCEED 233
           D LDC  D
Sbjct: 239 DYLDCYGD 246


>gi|55979982|ref|YP_143279.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8]
 gi|73535442|pdb|1WMW|A Chain A, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
           From Thermus Thermophilus
 gi|73535443|pdb|1WMW|B Chain B, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
           From Thermus Thermophilus
 gi|73535444|pdb|1WMW|C Chain C, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
           From Thermus Thermophilus
 gi|73535445|pdb|1WMW|D Chain D, Crystal Structure Of Geranulgeranyl Diphosphate Synthase
           From Thermus Thermophilus
 gi|31745059|dbj|BAC77651.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus]
 gi|55771395|dbj|BAD69836.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus HB8]
          Length = 330

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 83/225 (36%), Gaps = 17/225 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I   L + LL    H    + D L     Y   GGK +R  L    A          L
Sbjct: 6   EAIRQALQERLLARLDHPDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E    + L+HDD+   D    RRG+P +H  +    A+ AG+ +    + +++ 
Sbjct: 63  EAATALELFQNWVLVHDDIE--DGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAE 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKTG-A 187
               L   +    +L   H + ++    GQ LD+         +     F +   K    
Sbjct: 121 ---GLARGLFPPEVLLEFHEV-VRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYY 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   GA++A  +          G  LG  FQ+ DD+L+ E 
Sbjct: 177 TAVAPLRLGALLAGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEG 219


>gi|147901253|ref|NP_001084626.1| hypothetical protein LOC414582 [Xenopus laevis]
 gi|46249832|gb|AAH68912.1| MGC83119 protein [Xenopus laevis]
          Length = 348

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 91/248 (36%), Gaps = 17/248 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
           M   + S+ QE S   + I++DL  + + H +      RL   ++Y  LGGK  R   V 
Sbjct: 1   MKSQVSSERQEFSSYFEQIVEDLAAEDSGHPEVGDAIGRLKEVLQYNTLGGKCNRGVTVL 60

Query: 60  ECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                        + N   AL VG  +E +  + L+ DD+  MDN   RRG+P  + +  
Sbjct: 61  ASYRELLGPELHKDGNLQRALAVGWCVELLQAFFLVADDI--MDNSVTRRGQPCWYRKEG 118

Query: 113 EVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDI 167
               A+     L    + I+          +    +   T      G    ++  Q   +
Sbjct: 119 IGLDAVNDSFLLEACIYRILRKYCRGKPYYLSLLELFLETSYQTELGQALDLITAQPGKV 178

Query: 168 QDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLAD 225
                 E +   I K KT          +   MA    + E +  +     +G  FQ+ D
Sbjct: 179 DLNRYTEKRYKAIVKYKTAFYSFYLPVAAAMYMAGIDGEEEHKNAKTILLEMGEFFQIQD 238

Query: 226 DLLDCEED 233
           D LDC  D
Sbjct: 239 DYLDCYGD 246


>gi|296272185|ref|YP_003654816.1| polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096360|gb|ADG92310.1| Polyprenyl synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 298

 Score =  127 bits (321), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 23/222 (10%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            I+ D +L+       + +  L       L  GK +RS L+ + A      +  ++++ A
Sbjct: 5   KIVKDRILEFVKECDDEKSIELFG----HLATGKMLRSKLILKIA----GINEESIKLCA 56

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +E IH  SL+HDD+  +D    RRG P+V+  YD  TAI+ G+ L + AF  +S    +
Sbjct: 57  IVEMIHAASLLHDDV--IDEATTRRGSPSVNALYDAKTAIMFGDVLYSKAFTELSQMNKK 114

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
           +  NI S         + +  M+   +    +   +      +   KT +L+  +  S  
Sbjct: 115 VAYNISSA-----VTKLSIGEMMDIDLTQTFNTDYNL--YLDMIYKKTASLIEASAAS-- 165

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
             A  +  ++E+   +G+NLG+ FQ+ DD+LD  +D   L K
Sbjct: 166 -AAILANKDEEKYALYGKNLGLAFQMIDDILDITQDAQTLGK 206


>gi|308184045|ref|YP_003928178.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           SJM180]
 gi|308059965|gb|ADO01861.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           SJM180]
          Length = 307

 Score =  127 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 95/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    RI + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLKAIQNRIASWIKEIESGFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  DEKIDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +     S  +L L+        +G      +    D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGESIA-QALSNAVLRLSRGEIEDVFVG------ESFNSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +    + +    FG + G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKMYADFGLHFGMAFQIIDDLLDITQDAK 210


>gi|302336784|ref|YP_003801990.1| polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301633969|gb|ADK79396.1| Polyprenyl synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 356

 Score =  127 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 23/205 (11%)

Query: 50  GKKIRSFLVTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK IR  LV+  A L        AL +GAA+E      LIHDD+  MD   +RRG+ TVH
Sbjct: 48  GKMIRGSLVSLGAGLVAGEAPPAALPLGAAMELFQSALLIHDDI--MDRDTMRRGQSTVH 105

Query: 109 IQY---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             Y                E   I AG+  +  AF +++       ++   +L+   +  
Sbjct: 106 HYYALEAAKYGTDDAAHLGESLGICAGDVAIFLAFSLVNEAGLIAGNH--HELVGLFSRE 163

Query: 154 IGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERL 210
           + + G      +   D + D    +V  + + KTG         +GA++A A +  ++ L
Sbjct: 164 MSIVGTAQMSDVAWSDGWGDPNLAEVISLYRYKTGRYTFSLPLSAGALIAGADRRFRDLL 223

Query: 211 RCFGENLGIIFQLADDLLDCEEDLP 235
             +GE LGI+FQ+ DD L    +  
Sbjct: 224 EEYGELLGILFQIRDDELGLFGESE 248


>gi|221053263|ref|XP_002258006.1| polyprenyl synthetase [Plasmodium knowlesi strain H]
 gi|193807838|emb|CAQ38543.1| polyprenyl synthetase, putative [Plasmodium knowlesi strain H]
          Length = 522

 Score =  127 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 9/164 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+ AA E IH  SL+HDD+  +D+   RRG   +H +Y    +I++G+ LL  A  + +S
Sbjct: 251 RIIAASEIIHMGSLLHDDV--IDDSNNRRGALALHKKYGNKISILSGDFLLARASSVFAS 308

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                     + ++ SL     ++G L    L   +        F+    KT +L     
Sbjct: 309 IGCPQICKRFAYVVESL-----IKGELLQTNLKFNNIEDALKTYFIKTYHKTASLFSHLF 363

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
              AI++  ++         G ++G+ FQL DD LD + D  KK
Sbjct: 364 ACMAILSFKNEKIINLCFNLGLHIGMAFQLYDDYLDYKPD--KK 405


>gi|296393493|ref|YP_003658377.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985]
 gi|296180640|gb|ADG97546.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985]
          Length = 378

 Score =  127 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 97/245 (39%), Gaps = 32/245 (13%)

Query: 17  DTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-----ECASLFNVN 68
           +  L + L    + A  +  Q  + +       L  GK++R                  +
Sbjct: 33  EQRLVEFLADRRREADRLGPQFAEVVEGLSALVLGSGKRVRPAFAWLGWLGAGGDAAGPD 92

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYD 112
                RV AA+E +    L+HDD+  +D   +RRG+P++H                 ++ 
Sbjct: 93  AGAVQRVCAALELLQAGLLVHDDI--IDQSDLRRGEPSLHRRFEAEHSREGWSGDAARHG 150

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQD 169
           E  AI+AG     +A ++ +     +    R+      +       ++GGQ LD      
Sbjct: 151 EALAILAGELAFVWADDLAAEGLDAVAGADRTAFRKVWS--AMRAEVIGGQCLDVLAQAG 208

Query: 170 EFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           +   E     + + KT    +    E G ++A A+++     R FG+++G+ FQL DDLL
Sbjct: 209 DDESEEAATRVIRWKTASYTVARPLELGGVLACANESLLTFYRSFGDDVGVAFQLHDDLL 268

Query: 229 DCEED 233
               D
Sbjct: 269 GVFGD 273


>gi|256395788|ref|YP_003117352.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256362014|gb|ACU75511.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 338

 Score =  127 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 76/187 (40%), Gaps = 11/187 (5%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  +          +    +    A+E +H +SL+HDD+  MDN  +RR +P   
Sbjct: 53  GGKALRPAMALLSGRAAGADMARVVPAAVAVEFVHAFSLLHDDV--MDNDRMRRHRPAAW 110

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +           +L     +  + +  L          +       + ++ GQ LD+ 
Sbjct: 111 TVFGVPA------AILAGDALLALAEEVLLDRGTTGAHRAARHIAATTRKLIAGQALDLG 164

Query: 169 DEFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
            E   +  +     +   KT AL   +C  GA++A A       L  FGE+LG+ FQL D
Sbjct: 165 FETRTDVSLDECTVMSMDKTAALFACSCSIGAVLAEAPNRLALALSGFGEDLGLAFQLVD 224

Query: 226 DLLDCEE 232
           DLL    
Sbjct: 225 DLLGIWG 231


>gi|217033468|ref|ZP_03438898.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10]
 gi|216944173|gb|EEC23601.1| hypothetical protein HP9810_1g82 [Helicobacter pylori 98-10]
          Length = 307

 Score =  127 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLKAIQNKIASWIKEIESSFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           N          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  NEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S    +L     S  +L L+        +G           ++ + + I
Sbjct: 106 DVFYSKAFFELSKMG-ELIAKALSNAVLRLSRGEIEDVFVGECF------NSNKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+      + +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILL---DKDAKIYADFGLNFGMAFQIVDDLLDIIQDAK 210


>gi|15611295|ref|NP_222946.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori J99]
 gi|4154736|gb|AAD05797.1| putative OCTAPRENYL-DIPHOSPHATE SYNTHASE [Helicobacter pylori J99]
          Length = 307

 Score =  127 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 23/194 (11%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L +          AL + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLDEKTDAILLDKALNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +     S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMGESIA-QALSNAVLRLSRGEIEDVFVGECF- 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+ +    + +    FG + G+ FQ+ D
Sbjct: 149 -----NSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKMYADFGLHFGMAFQIID 200

Query: 226 DLLDCEED---LPK 236
           DLLD  +D   L K
Sbjct: 201 DLLDITQDANTLGK 214


>gi|307636933|gb|ADN79383.1| octaprenyl-diphosphate synthase [Helicobacter pylori 908]
 gi|325995523|gb|ADZ50928.1| Octaprenyl-diphosphate synthase [Helicobacter pylori 2018]
 gi|325997121|gb|ADZ49329.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 2017]
          Length = 307

 Score =  127 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 35/239 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +L+    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKRLKAIQNKIASWIKEIESGFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  DEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGESIA-QALSNAVLRLSRGEIEDVFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            + KT   +  + +S AI+ +    + +    FG + G+ FQ+ DDLLD  +D   L K
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KDAKMYADFGLHFGMAFQIIDDLLDITQDANTLGK 214


>gi|118594190|ref|ZP_01551537.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Methylophilales bacterium HTCC2181]
 gi|118439968|gb|EAV46595.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [Methylophilales bacterium HTCC2181]
          Length = 322

 Score =  127 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 9/185 (4%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR+ L     SL  ++  T ++     E IH  SL+HDD+   D    RRG+ TV  
Sbjct: 51  GKWIRAKLALATGSLLGLSSETYIKWAVVCELIHSASLLHDDVC--DKDLYRRGRLTVWK 108

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167
           ++    AI  G+ L+  +F+ I+         I  +L+ S   +I     + GQ +D  +
Sbjct: 109 EFGIPAAICTGDYLIAESFKKITEISQGWHQTILLKLLSSSVKDI-----VFGQSVDVSV 163

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               +D      I   KTG L+               +E   L+   ENLG+ +Q  +D+
Sbjct: 164 DSVLLDWANYQKIAIKKTGPLIMLPIMGMFKCKEFDGDECIALKEISENLGLAYQWVNDI 223

Query: 228 LDCEE 232
            +   
Sbjct: 224 ENFVG 228


>gi|261839097|gb|ACX98862.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori 52]
          Length = 307

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L +          A  + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  + +  A++ G+   + AF  +S    +L     S  +L L+        +G    
Sbjct: 91  SINALFGDFNAVMLGDVFYSKAFFELSKMG-ELIAKTLSNAVLRLSRGEIEDVFVGECF- 148

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 149 -----NSDKQKYWRILEDKTAHFIEASLKSMAILLN---KDAKIYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|283777976|ref|YP_003368731.1| hypothetical protein Psta_0175 [Pirellula staleyi DSM 6068]
 gi|283436429|gb|ADB14871.1| protein of unknown function DUF116 [Pirellula staleyi DSM 6068]
          Length = 673

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 84/216 (38%), Gaps = 25/216 (11%)

Query: 41  SAIRYALL--GGKKIRSFLVTECASLFNVNH------------------LTALRVGAAIE 80
            +I Y  L  GGK  R F+           H                   T  R   +IE
Sbjct: 329 ESIAYDFLAKGGKYSRPFITMAVHDALTGGHGTLPKMPAGGGEVQLDIPDTVKRAALSIE 388

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H  SL+HDD+   D+   R G+ TVH ++   TAI  G+ L+   + ++S     +  
Sbjct: 389 TFHKASLVHDDIE--DDDAFRYGEETVHRRFGTPTAINVGDYLIGMGYRLVSKQSRAMGP 446

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQ---MLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
           +  + ++  L           G      D +D+ +       I  +KT      A  SGA
Sbjct: 447 DTAADILDILADAHIRLSEGQGAELLWRDARDKRLSPLDALKIYALKTSPAFEAALLSGA 506

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +A       E LR F  NLG+ FQ+ +DL D + D
Sbjct: 507 RLAGDVTQYLEPLRQFARNLGVAFQILNDLGDWQGD 542


>gi|217031457|ref|ZP_03436962.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128]
 gi|298736814|ref|YP_003729344.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8]
 gi|216946657|gb|EEC25253.1| hypothetical protein HPB128_21g15 [Helicobacter pylori B128]
 gi|298356008|emb|CBI66880.1| octaprenyl-diphosphate synthase [Helicobacter pylori B8]
          Length = 307

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +LQ    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKRLQAIQNKIASWIKEIESGFIDALFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +          A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  DEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +   I S  +L L+        +G      +    D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGEAIA-QILSNAVLRLSRGEIEDVFVG------ESFNSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+ +      +    FG N G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILLN---KNAKMYADFGLNFGMAFQIIDDLLDITQDAK 210


>gi|182433853|ref|YP_001821572.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|182440870|ref|YP_001828589.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178462369|dbj|BAG16889.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178469386|dbj|BAG23906.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 402

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 27/238 (11%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-NVNHLTALRV 75
           D++L + + +   H     ++       +AL GGK++R  L+              ALR+
Sbjct: 49  DSVLAECVAEATLHDSEFSDEVAHRVADFALRGGKRMRPLLLWWAMRACSGAESEAALRL 108

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIA 119
           G A+E I   +LI DD+  MD  + RRG+P VH                  +    A++A
Sbjct: 109 GVALELIQTCALIQDDV--MDRSHTRRGRPAVHIALAEQRGLAAGSGPGAAFGASAAVLA 166

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQ 176
           G+  L +A + +           + + +           M+ GQ LD++ +        +
Sbjct: 167 GDLALVWADDTVGETFLPPGRRRQVRALWRSMRG----EMIAGQYLDLRGQIGGGASAAR 222

Query: 177 VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                 +K+    +      GA +A A +   + LR      G+ FQL DDLL    D
Sbjct: 223 ALRTAHLKSALYSVERPVALGAALAGADEWTTDALRSASRYAGMAFQLRDDLLGVFGD 280


>gi|240168232|ref|ZP_04746891.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           kansasii ATCC 12478]
          Length = 352

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 25/211 (11%)

Query: 45  YALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           +AL GGK++R                    L++ +A+E +H ++LIHDD+  +D    RR
Sbjct: 37  FALRGGKRLRPVFAYWGWHAVTTEEPGPEILQLFSALELLHAWALIHDDV--IDASSTRR 94

Query: 103 GKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           G+PT H                 Q+    AI+ G+    +A +I+S           ++ 
Sbjct: 95  GRPTAHVHFAALHRERNWLGPAHQFGISAAILLGDVAQAWADDIVSEVGQTSLPPDAARR 154

Query: 147 MLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHA 202
           +  +   I    +LGGQ LDI               +   KT    +    + G   A  
Sbjct: 155 VRRVWSGIRT-EVLGGQYLDIVAEASAASSIASAMTVATFKTACYTVSRPLQLGVAAAAD 213

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +       FG +LG+ FQL DD+L    D
Sbjct: 214 RPDVAAAFHQFGTDLGVAFQLRDDVLGVFGD 244


>gi|108562668|ref|YP_626984.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           HPAG1]
 gi|107836441|gb|ABF84310.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           HPAG1]
          Length = 307

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 20/190 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L +          A  + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S    ++     S  +L L+        +GG   
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMG-EVIAQALSNAVLRLSRGEIEDVFVGG--- 146

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  D+ + + I + KT   +  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 147 ---SFNSDKQKYWCILEDKTAHFIEASLKSMAILLN---KDAKMYADFGLNFGMAFQIID 200

Query: 226 DLLDCEEDLP 235
           DLLD  +D  
Sbjct: 201 DLLDITQDAK 210


>gi|299738690|ref|XP_001834728.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea
           okayama7#130]
 gi|298403425|gb|EAU87176.2| decaprenyl-diphosphate synthase subunit 1 [Coprinopsis cinerea
           okayama7#130]
          Length = 505

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 12/171 (7%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            T +R+   +E +H  SL+HDD+  +D   +RRG  +    +    +++ GN +L  A  
Sbjct: 193 PTQVRLAQIVEMLHTASLLHDDV--IDESALRRGAASAPSAFGNKQSVLGGNFVLGRASA 250

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------VFMIQKM 183
            +S         + + ++ +L     LQ  L    LD   E   + +            +
Sbjct: 251 ALSRLGDPEVTQLIAGVLSNLVEGEILQ--LKEIQLDGSPETASQRRQDAWNIYLHKTYL 308

Query: 184 KTGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEE 232
           KT +LM     S  ++    + E   E    +G NLGI FQL DD+LD E 
Sbjct: 309 KTASLMAKGARSAVVLGGCKEGEIWKEIAYAYGRNLGIAFQLVDDVLDYES 359


>gi|317506600|ref|ZP_07964392.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316255109|gb|EFV14387.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 378

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 29/234 (12%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAI 79
            + A+ +  Q  D +     + L  GK+IR             +          RV AA+
Sbjct: 44  QEEAARIGPQFADVVAELSTFVLGSGKRIRPAFAWLGWLGAGGDAAGASAVPVQRVCAAL 103

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGL 123
           E +    L HDD+  +D   +RRG+P++H +                + E  AI+AG   
Sbjct: 104 ELLQAGLLAHDDI--IDQSDLRRGEPSLHRRFEAEHSRERWAGRSERHGEALAILAGELA 161

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMI 180
             +A ++ +     + +  R     +         ++GGQ LD+  +      E     +
Sbjct: 162 FVWADDLAAEGLDAVTEADRPAFRRAWA--AMRSEVIGGQCLDVLAQAGGDESEEAAARV 219

Query: 181 QKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + KT    +    E G ++A A +      R FGE++G  FQL DDLL    D
Sbjct: 220 IRWKTASYTVARPLELGGVLARADEALLTFYRGFGEDVGAAFQLQDDLLGVFGD 273


>gi|317125086|ref|YP_004099198.1| polyprenyl synthetase [Intrasporangium calvum DSM 43043]
 gi|315589174|gb|ADU48471.1| Polyprenyl synthetase [Intrasporangium calvum DSM 43043]
          Length = 368

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 96/246 (39%), Gaps = 27/246 (10%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV-NH 69
            +R+   +D  +  + + +    +D   L+ ++   L GGK +R+  +          + 
Sbjct: 11  RRRVQQAIDAHIQGSRAALAEIGDDIAPLVDSVSRLLSGGKGLRASFLYWGYRAAGAADS 70

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDE 113
              +R+ A++E     +L+HDD+  MD    RRG P+ H                 ++ E
Sbjct: 71  DALVRLSASMEFFQAAALLHDDV--MDRSDTRRGMPSAHRAVADLHRSRGWAGDDARFGE 128

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-----MLGGQMLDIQ 168
             AI+AG+  LT+  E+ S+     +D  R +    L     + G     +   +  D  
Sbjct: 129 GAAILAGDLCLTWCDELFSTCGLPAEDLARGRGAFDLMRTQLMGGQFLDLLESARGWDGL 188

Query: 169 DEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           D          + + K+    +      GA +  A +     L  +G  LG  FQL DDL
Sbjct: 189 DLEARIASARNVIRYKSAKYTIEHPLLIGARVGGAPEAALGDLSAYGLALGEAFQLRDDL 248

Query: 228 LDCEED 233
           L    D
Sbjct: 249 LGVYGD 254


>gi|303233112|ref|ZP_07319785.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4]
 gi|302480697|gb|EFL43784.1| polyprenyl synthetase [Atopobium vaginae PB189-T1-4]
          Length = 379

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 22/223 (9%)

Query: 29  SHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLF------------NVNHLTALRV 75
            H+    +  L   +   + G GK IR  L    A +              V     +R+
Sbjct: 54  GHITNNLDAFLYEPLAQFVQGKGKFIRPALCMLGAHIAAGERAAGEAVQTEVLPDALVRL 113

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             A+E     +LIHDD+   D   +RRG P ++  +    AI  G+  L  A ++I +  
Sbjct: 114 ACALELFQAAALIHDDIA--DESLVRRGNPCLYRTHGTGLAINMGDCALVDASKLICTLS 171

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-----IQDEFIDETQVFMIQKMKTG-ALM 189
            +   +  +  +L     +  +  + GQ LD      +   +  +   ++ ++KT    +
Sbjct: 172 AEGLPSNAALQLLDEFLTME-RTTIEGQALDLGWSRARTWNLAPSDYLVMAELKTAHYSL 230

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 GA+ A A +   + LR FG   G+ FQL DD L+   
Sbjct: 231 ASPLVLGALFAQAPKALCDALREFGCAAGVAFQLRDDYLNLFG 273


>gi|49259558|pdb|1VG6|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima
           F132aL128AI123A Mutant
          Length = 299

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEAGNNKARRAALNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|82540178|ref|XP_724427.1| polyprenyl synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479061|gb|EAA15992.1| Polyprenyl synthetase, putative [Plasmodium yoelii yoelii]
          Length = 540

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 7/154 (4%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA E IH  SL+HDD+  +D    RRG  ++H +Y    +I++G+ LL  A  + +S   
Sbjct: 272 AASEIIHMGSLLHDDV--IDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVFASIGY 329

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                  S ++ SL     ++G      L+  +         +    KT +L        
Sbjct: 330 PEICKRFSYVIESL-----IKGEFLQTNLNYNNIEDALKTYLIKSYHKTASLFSHLFACI 384

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AI++  +    E     G ++G+ FQL DD LD 
Sbjct: 385 AIISFQNDKITELCFNLGLHIGMAFQLYDDYLDY 418


>gi|109947883|ref|YP_665111.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str.
           Sheeba]
 gi|109715104|emb|CAK00112.1| octaprenyl-diphosphate synthase [Helicobacter acinonychis str.
           Sheeba]
          Length = 307

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 34/233 (14%)

Query: 6   PSKLQENSKRIDTILDD----LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS--FLVT 59
             +LQ    +I + + +     + +  SH+                   K +RS   L  
Sbjct: 3   EQQLQAIQNKIASWIKEIESGFIDELFSHIGPS----------------KMLRSKLMLAL 46

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
               +  +    A  + A +E I   SL+HDD+  +D   +RR  P+++  +    A++ 
Sbjct: 47  LDTKIDAIILDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVML 104

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+   + AF  +S  +  L   I S  +L L+        +G      +    D+ + + 
Sbjct: 105 GDVFYSKAFFELSKMEN-LIAQILSNAVLRLSRGEIEDVFVG------ESFNSDKQKYWR 157

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I + KT   M  + +S AI+ +    + +    FG N G+ FQ+ DDLLD  +
Sbjct: 158 ILEDKTAHFMEASLKSMAILLN---KDAKIYANFGLNFGMAFQIIDDLLDITQ 207


>gi|317013686|gb|ADU81122.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           Gambia94/24]
          Length = 307

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 32/235 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
             +LQ    +I + + ++       + ++                K +RS L+     L 
Sbjct: 3   EKQLQAIQNKIASWIKEIESGFIDELFSKIGPS------------KMLRSKLMLA---LL 47

Query: 66  NVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           +          A  +   +E I   SL+HDD+  +D   +RR  P+++  +    A++ G
Sbjct: 48  DEKTDAILLDKAFNLCTIVEMIQTASLLHDDV--IDKATMRRKLPSINALFGNFNAVMLG 105

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +   + AF  +S     +     S  +L L+        +G           D+ + + I
Sbjct: 106 DVFYSKAFFELSKMGESIA-QALSNAVLRLSRGEIEDVFVGECF------NSDKQKYWRI 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT   +  + +S AI+      + +    FG + G+ FQ+ DDLLD  +D  
Sbjct: 159 LEDKTAHFIEASLKSMAILL---DKDAKMYADFGLHFGMAFQIIDDLLDITQDAK 210


>gi|62752853|ref|NP_001015867.1| farnesyl diphosphate synthase [Xenopus (Silurana) tropicalis]
 gi|59861885|gb|AAH90384.1| MGC108224 protein [Xenopus (Silurana) tropicalis]
 gi|124504226|gb|AAI28626.1| MGC108224 protein [Xenopus (Silurana) tropicalis]
          Length = 348

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 88/248 (35%), Gaps = 17/248 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
           MN    S+ QE S   + I+ DL  + + H +      RL   + Y   GGK  R   V 
Sbjct: 1   MNSHAGSERQEFSSYFEQIVQDLTAEDSGHPEVGDAITRLKEVLEYNTPGGKCNRGVTVL 60

Query: 60  ECA-SLFN------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                L         N   AL VG  +E +  + L+ DD+  MDN   RRG+P  + +  
Sbjct: 61  ASYKELVGPELHKDGNLQRALAVGWCVELLQAFFLVADDI--MDNSVTRRGQPCWYRKEG 118

Query: 113 EVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDI 167
               A+     L    + I+          +    +   T      G    ++  Q   +
Sbjct: 119 VGLDAVNDSFLLEASIYRILRKYCRGKPYYLSLLELFLETSYQTELGQALDLITAQPGKV 178

Query: 168 QDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLAD 225
                 E +   I K KT          +   MA  A + E    R     +G  FQ+ D
Sbjct: 179 DLNRYTEKRYKAIVKYKTAFYSFYLPVAAAMYMAGIAGEAEHTNARTILLEMGEFFQIQD 238

Query: 226 DLLDCEED 233
           D LDC  D
Sbjct: 239 DYLDCYGD 246


>gi|49259559|pdb|1VG7|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima
           F132aL128AI123AD62A MUTANT
          Length = 299

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEAAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEAGNNKARRAALNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|311742815|ref|ZP_07716623.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272]
 gi|311313495|gb|EFQ83404.1| polyprenyl synthetase [Aeromicrobium marinum DSM 15272]
          Length = 362

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 89/251 (35%), Gaps = 35/251 (13%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRY--ALLGGKKIRSFLVTECASLFNVNHLT-- 71
           +D  L   +    + +                 + GGK++R         +         
Sbjct: 14  VDAALVSFVQHQRTRLDPLGPPLADLVDAAAAYVSGGKRLRPAFCLAGWRVATATPDDTP 73

Query: 72  ---ALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------------- 111
              A+ V A ++E +   +L+HDDL  MD    RRG+P+VH  +                
Sbjct: 74  VPEAVAVAAGSLEWLQGSALVHDDL--MDGSDTRRGRPSVHRDFEQRHRREAMVGDPAGF 131

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-----IGLQGMLGGQMLD 166
              TA++ G+ +L++  E++ S   +      +     L        +    ++ GQ LD
Sbjct: 132 GAATAVLMGDLMLSWCDEMLRSAGHRPGPFTGADGAARLARAFEVLDVCKTEVVAGQFLD 191

Query: 167 IQDEFIDE---TQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           + ++   E    +  ++ + K     +      GA +    Q     L      LG  FQ
Sbjct: 192 VVNQTRPESSAAEAMLVVRYKAAKYTVERPLHLGATLGGGDQALMAGLSAVALPLGEAFQ 251

Query: 223 LADDLLDCEED 233
           L DD+L    D
Sbjct: 252 LRDDVLGVFGD 262


>gi|254416180|ref|ZP_05029935.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420]
 gi|196177113|gb|EDX72122.1| polyprenyl synthetase family [Microcoleus chthonoplastes PCC 7420]
          Length = 452

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 87/242 (35%), Gaps = 15/242 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63
           +   LQ +   I   ++D +              L   +  Y    GK +R  +    A 
Sbjct: 95  INEALQGSRDAIFVKIEDFIQSQRQVSGAYTP--LYELLSDYPFRVGKMLRPTMCISVAR 152

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                  +AL   AA+E  H   LIHDD+   D    RRGK T+H       AI  G+  
Sbjct: 153 AVGGMGHSALTAAAALELYHNAFLIHDDIE--DESESRRGKGTLHQMIGIPRAINVGDAT 210

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFIDETQVFMI 180
              A  ++    + L  +    ++  +              LD        + +   F +
Sbjct: 211 NVLAVGLLLENLSVLGVSKALNILHEIEFMARQSVEGQAMELDWVATNPSHLSDQDYFTM 270

Query: 181 QKMKT-GALMCFACESGAIMAHASQNEKER------LRCFGENLGIIFQLADDLLDCEED 233
              KT        C  G I+ H + + ++       L  FG  LGI FQ+ DDLL+ + +
Sbjct: 271 CVKKTCWYSFITPCRIGLIVGHPASSVQDLIEPLAGLTRFGMILGIAFQIQDDLLNLQGE 330

Query: 234 LP 235
           + 
Sbjct: 331 ME 332


>gi|86475810|dbj|BAE78987.1| Probable geranyl diphosphate synthase [Streptomyces sp. KO-3988]
          Length = 352

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 37/243 (15%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLL--SAIRYALL-GGKKIRSFLVTECASLFNVNHLT 71
           R++  L  LL          H   ++   A+   +  GGK+IR             +   
Sbjct: 23  RVEDRLRSLLAVERDAWAAVHEQAVVPVDALSELIASGGKRIRPAFCITGYLAAGGDPAE 82

Query: 72  --ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDE 113
              +  GAA+E +H  +L+HDD+  +D+   RRG PTVH                 +Y E
Sbjct: 83  PGIVAAGAALEMLHLSALVHDDV--LDDSSSRRGVPTVHTQAMALHESSGWQGEPRRYGE 140

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--- 170
             AI+ G+  L Y+ E+++    ++              N     ++ GQ +D+      
Sbjct: 141 GVAILVGDLALVYSEELMAEAPRRVLPE----------WNKLRSEVMIGQYMDVHAAAEF 190

Query: 171 FIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +D     +I ++K+G   +      GA       +    L  +GE +G  FQL DDLLD
Sbjct: 191 SVDPRSSRLIARIKSGRYTIHRPLVVGAKRGRGRGDLAPALEEYGEAVGEAFQLRDDLLD 250

Query: 230 CEE 232
              
Sbjct: 251 ASA 253


>gi|49259556|pdb|1VG4|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima F132aL128A
           MUTANT
 gi|49259557|pdb|1VG4|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima F132aL128A
           MUTANT
          Length = 299

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKARRAALNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|159039018|ref|YP_001538271.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
 gi|157917853|gb|ABV99280.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
          Length = 360

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 94/245 (38%), Gaps = 30/245 (12%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECAS-LFNVN 68
            +R+D  L D L    + M         +  A+  + L GGK++R             ++
Sbjct: 16  RQRVDKALADFLAARRTWMTDVDGSLAPVADAVEAFVLGGGKRLRPAFAYWGYRGAGGID 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------D 112
                   AA+E +   +LIHDDL  MD    RRG+P VH+++                 
Sbjct: 76  TEQVATALAALEFVQASALIHDDL--MDRSDTRRGEPAVHLRFAAQHRSAGWDGDADGFG 133

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           +  AI+ G+  L ++ E++ S     +   R++ +     +        GQ LD+  +  
Sbjct: 134 DAAAILLGDLCLVWSDELLHSAGLDPRTVARARPIFDQMRSEVTV----GQYLDVLTQAT 189

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLL 228
            +T V    K+       +  E   ++  A    +         +G  LG  FQL DD+L
Sbjct: 190 GDTSVEWAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSTYGLPLGEAFQLRDDVL 249

Query: 229 DCEED 233
               D
Sbjct: 250 GVFGD 254


>gi|28572702|ref|NP_789482.1| polyprenyl diphosphate synthase [Tropheryma whipplei TW08/27]
 gi|28410834|emb|CAD67220.1| putative polyprenyl diphosphate synthase [Tropheryma whipplei
           TW08/27]
          Length = 354

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 40/247 (16%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-- 73
           ++T +   +L   +   ++H + +   ++    GGK++R+ L    A             
Sbjct: 7   VNTKISRFILNNKT---SKHTESMYDYLQDFTFGGKRLRAKLCFTGAECIGPIPENLFEL 63

Query: 74  --RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVT 115
              +  AIE  H  +L+HDDL  +D    RRG P VH ++                   +
Sbjct: 64  ISDIAVAIELFHAAALVHDDL--IDKSDSRRGLPAVHKRFAKFHEENSFVKCKENFGTAS 121

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----------LMLSLTHNIGLQGMLGGQML 165
           AI+AG+ LL ++     S    L +    Q          ++     N  + G     + 
Sbjct: 122 AILAGDMLLVWSSRFFYSALNNLLNTTAKQASDFHLDTMNILWHEMQNEVVIGQYMDVLH 181

Query: 166 DIQDEFIDETQVF----MIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGII 220
           + +   +   +       I   K+G   +      GA    A+    E L+ F   +G+ 
Sbjct: 182 EHRWRQLSVQEALDISKEIMIKKSGKYSVQVPLCLGANTNGATIEHLEVLKRFSLPIGLA 241

Query: 221 FQLADDL 227
           FQ+ +D+
Sbjct: 242 FQMRNDI 248


>gi|224372814|ref|YP_002607186.1| prenyl transferase [Nautilia profundicola AmH]
 gi|223589295|gb|ACM93031.1| prenyl transferase [Nautilia profundicola AmH]
          Length = 287

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 19/186 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+T            A ++ A +E IH  SL+HDD+  +D    RRG  +++ 
Sbjct: 23  GKGIRGKLITII-------DPNAQKLAAVVESIHLASLLHDDV--IDEADTRRGAASINA 73

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y + TA++ G+ + + AF  +      +   +      S    +  QG L    L    
Sbjct: 74  KYGDHTAVMLGDIVYSRAFYELIDFGKDIAKTV------SNAVYLLSQGELEDVKL-SNS 126

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +D+ +   +   KT +L+  AC +GAI A   +N   +   +G+N+GI FQ+ DDLLD
Sbjct: 127 INLDKDKYMQMIYKKTASLIEAACAAGAISAGLDRN---KFATYGKNIGIAFQIIDDLLD 183

Query: 230 CEEDLP 235
             +D  
Sbjct: 184 ITQDEE 189


>gi|302348187|ref|YP_003815825.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus
           saccharovorans 345-15]
 gi|302328599|gb|ADL18794.1| Geranylgeranyl pyrophosphate synthetase, putative [Acidilobus
           saccharovorans 345-15]
          Length = 310

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 19/214 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           T+++  L    S ++    + L S   Y + GGK  R F+    A     N   A     
Sbjct: 22  TMIEPELNSIVSRLEMAGLEGLAS---YIVKGGKMFRGFMTMLFAEAAGGNLDRAKDAAI 78

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +   SL  DD+  +D    RRG P+  + Y    + +A   L+  A +++      
Sbjct: 79  AVELVQGASLALDDI--IDKDAERRGGPSAWVLYGIGKSAMASLLLVPTALKLVEQYGP- 135

Query: 138 LKDNIRSQLMLSLTHNIGLQG-MLGGQMLDIQDE-FIDETQVFMIQKMKTGALMCFACES 195
                     L+L+++I     M+ G+++D      ++  +   +  +KTG+L   A   
Sbjct: 136 ----------LALSYSITAWESMVRGEIMDAYSSLNLEPVEYLQLASLKTGSLFSLASTL 185

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           G I A+  +   ER   +G  +G  +QLADD+ D
Sbjct: 186 GVIAANH-EEYAERAWNYGNIVGTAYQLADDITD 218


>gi|182440623|ref|YP_001828342.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178469139|dbj|BAG23659.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 425

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 91/237 (38%), Gaps = 27/237 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVG 76
            +L + + +  +      ++       + L GGK++R  L+              ALR+G
Sbjct: 52  AVLAERVDEAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAAETTAALRLG 111

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAG 120
            A+E I   +LIHDD+  MD   +RRGKP VH                  +    A++AG
Sbjct: 112 VALELIQSCALIHDDV--MDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAG 169

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +  L +A + ++          R   +           M+ GQ LD++ +    + V   
Sbjct: 170 DLALAWADDTVAETALSAVQRRRIGPLWRAMRT----EMVAGQYLDLRGQVRGGSSVEQA 225

Query: 181 QKMKTGALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +        ++ E    +  A     +   + LR  G   GI FQL DDLL    D
Sbjct: 226 LRTACLKSASYSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGD 282


>gi|255024117|ref|ZP_05296103.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
           synthase) [Listeria monocytogenes FSL J1-208]
          Length = 98

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 1/95 (1%)

Query: 43  IRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           + Y++  GGK+IR  LV        VN L  ++   A+E IH YSLIHDDLP+MDN   R
Sbjct: 1   MLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYR 60

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           RGK T H  + + TAI+AG+ LLT AF I++  + 
Sbjct: 61  RGKYTNHKVFGDATAILAGDALLTLAFSILAEDEN 95


>gi|308803076|ref|XP_003078851.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri]
 gi|116057304|emb|CAL51731.1| geranyl diphosphat synthase (ISS) [Ostreococcus tauri]
          Length = 298

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 8/172 (4%)

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                +       R+    E IH  SL+HDD+  +DN   RRG   ++++     AI+AG
Sbjct: 28  AHEAPDDVRRRQQRLAEIAEMIHVASLLHDDV--LDNAATRRGLRALNLEVGNKLAILAG 85

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL  A   ++S +      + S+++  L     +Q     + L   + ++ +T     
Sbjct: 86  DFLLARASVTLASLRNTEVIELLSRVLEHLVAGEVMQMTAKPESLSSMEHYVKKTYY--- 142

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT +L+  + ++ A++    +   +    +G+NLG+ FQ  DD+LD   
Sbjct: 143 ---KTASLIANSSKAIALLGGHGEKSADLAYDYGKNLGLAFQFQDDVLDFIG 191


>gi|68072963|ref|XP_678396.1| polyprenyl synthetase [Plasmodium berghei strain ANKA]
 gi|56498851|emb|CAI04198.1| polyprenyl synthetase, putative [Plasmodium berghei]
          Length = 541

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 7/154 (4%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA E IH  SL+HDD+  +D    RRG  ++H +Y    +I++G+ LL  A  + +S   
Sbjct: 273 AASEIIHMGSLLHDDV--IDESEKRRGSLSLHKKYGNKVSILSGDFLLARACSVFASIGY 330

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                  S ++ SL     ++G      L+  +         +    KT +L        
Sbjct: 331 PEICKRFSYVIESL-----IKGEFLQTNLNYTNIEDALKTYLIKSYHKTASLFSHLFACI 385

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AI++  +    E     G ++G+ FQL DD LD 
Sbjct: 386 AIISFQNDQITELCFNLGLHIGMAFQLYDDYLDY 419


>gi|15644283|ref|NP_229335.1| octoprenyl-diphosphate synthase, putative [Thermotoga maritima
           MSB8]
 gi|170288987|ref|YP_001739225.1| polyprenyl synthetase [Thermotoga sp. RQ2]
 gi|46015919|pdb|1V4E|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima
 gi|46015920|pdb|1V4E|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima
 gi|4982102|gb|AAD36602.1|AE001800_12 octoprenyl-diphosphate synthase, putative [Thermotoga maritima
           MSB8]
 gi|170176490|gb|ACB09542.1| Polyprenyl synthetase [Thermotoga sp. RQ2]
          Length = 299

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|49259554|pdb|1VG2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima A76y Mutant
          Length = 299

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H YSL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLYSLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|297626728|ref|YP_003688491.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922493|emb|CBL57066.1| Farnesyltranstransferase / Geranylgeranyl pyrophosphate synthase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 358

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 79/236 (33%), Gaps = 25/236 (10%)

Query: 23  LLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTE---CASLFNVNHLTALRVGA 77
            L Q    +         L+   R    GGK++R          A     +    L   A
Sbjct: 27  FLDQIDEELAPVSPLMSELVGLARRFTAGGKRLRPAFCFWGHVAAGGAPADPTALLDATA 86

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGN 121
             E +H  +L+HDDL  +D+   RRG P  H Q                +    AI+ G+
Sbjct: 87  GFELLHVAALVHDDL--IDDSDTRRGMPAAHRQLEELHHRGGGVGDPAAFGRAGAILLGD 144

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLDIQDEFIDETQVFMI 180
            L  ++ +  ++         R++ +L     ++ +   L                   +
Sbjct: 145 LLTAWSTQRFATAGLDPAAFARARWVLDAVRTDVNVGQFLDLAAEGGLAGGAGLATAEQV 204

Query: 181 QKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT    +    + GA +A A     + L   G  +G  FQ  DDLL    D  
Sbjct: 205 VEYKTARYTVIRPLQFGAALAGAPAQLLDGLAHVGSAVGRAFQFRDDLLGVFGDEE 260


>gi|124800714|ref|XP_001349541.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7]
 gi|3845103|gb|AAC71816.1| octaprenyl pyrophosphate synthase [Plasmodium falciparum 3D7]
          Length = 538

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 7/157 (4%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           AA E IH  SL+HDD+  +D+   RRG   +H ++    +I++G+ LL  A  I +   +
Sbjct: 271 AASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAGTGS 328

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                 +     S      ++G    + L   +         +    KT +L        
Sbjct: 329 P-----KICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACI 383

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           AI++  +    +     G ++G+ FQL DD LD + D
Sbjct: 384 AILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYKID 420


>gi|58271024|ref|XP_572668.1| trans-hexaprenyltranstransferase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134114824|ref|XP_773710.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256338|gb|EAL19063.1| hypothetical protein CNBH1650 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228927|gb|AAW45361.1| trans-hexaprenyltranstransferase, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 483

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 9/162 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+ +  E IH  SL+HDD+  +D+  +RRG P+    +    +I++G+ LL  A   ++ 
Sbjct: 220 RLASITEMIHVASLLHDDV--IDSSSLRRGTPSAPSTFGNKLSILSGDFLLGRASVALAR 277

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             ++    + + ++ +L     +Q +      +                +KT +LM  + 
Sbjct: 278 LGSREVVELLATVIANLVEGEMMQ-LRATSEPEKAPTAKGFEDYMRKTYLKTASLMAKSA 336

Query: 194 ESGAIMAHA---SQN---EKERLRCFGENLGIIFQLADDLLD 229
            +  I+      S+     K+    +G NLGI FQL DD LD
Sbjct: 337 RAAVILGGCGSVSEEGAWVKDVAYGYGRNLGIAFQLIDDALD 378


>gi|323359581|ref|YP_004225977.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
 gi|323275952|dbj|BAJ76097.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
          Length = 355

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 94/240 (39%), Gaps = 25/240 (10%)

Query: 16  IDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNVN---HL 70
           ID+ ++  L +    +    +    L SAIR A  GGK+ R  LV       +       
Sbjct: 14  IDSAIEGALSRLDRRLGQHGDGARALASAIRRAAEGGKRFRPLLVVSAFDTLDGPDIARP 73

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT--------------- 115
              +V AA E +H   ++HDD+  +D+   RRG P V  ++                   
Sbjct: 74  ALYQVAAAFELLHTAFVVHDDV--IDHDVERRGMPNVGGEFRSRGTERGADAAGAALLGD 131

Query: 116 --AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
              I+AG+ LL  A  +++  +          L++     +   G L      +    ID
Sbjct: 132 AAGILAGDLLLHEAARLVAMAEIPTDLRRELLLLVEDAVLVSAAGELADVENAVSAGDID 191

Query: 174 ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +      KT         E+GA++A A    +  L+ FG+ LG+ +QL DDL+    
Sbjct: 192 ADTILRTTHDKTAVYSFSAPLEAGAVLAGAEAPVRHALQRFGQRLGLAYQLVDDLIGAFG 251


>gi|46015922|pdb|1V4I|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima F132a Mutant
          Length = 299

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAALNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|255322657|ref|ZP_05363801.1| prenyl transferase [Campylobacter showae RM3277]
 gi|255300218|gb|EET79491.1| prenyl transferase [Campylobacter showae RM3277]
          Length = 297

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 17/174 (9%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                +L++ A IE IH  SL+HDD+  +D+   RRG P+++  +    A++ G+ L + 
Sbjct: 43  GESEQSLKICAIIELIHLASLLHDDV--IDDADTRRGSPSINASFGTKNAVMLGDILYSK 100

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-TQVFMIQKMKT 185
            F  +S    ++   I        +  +    +     +D+  +F D+ +    +   KT
Sbjct: 101 GFYELSKFPYEIAGEI--------SGAVSKLSVGEMMDVDLSAKFNDDKSAYETMIYYKT 152

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
             L+  A   GA++A    +     + +G+NLG+ FQ+ DD+LD  +D   L K
Sbjct: 153 AVLIEAAAAVGAMLAGLDAS---NFKIYGKNLGLAFQIIDDILDVTQDAATLGK 203


>gi|290955133|ref|YP_003486315.1| geranylgeranyl pyrophosphate synthase [Streptomyces scabiei 87.22]
 gi|260644659|emb|CBG67744.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           scabiei 87.22]
          Length = 452

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 32/255 (12%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++  +P+ ++     ++ +L +   + A+       D      R+AL GGK +R   V  
Sbjct: 68  VDDDVPAAVRRV---LENLLAERTERAAALDPVFAADLADRVARFALDGGKLMRPRFVWW 124

Query: 61  CASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------- 109
                         ALRVGAA+E I   +L+HDD+  MD   +RRG+  +H         
Sbjct: 125 ALRACGGGAAETEAALRVGAALELIQTCALVHDDV--MDASRLRRGRLALHADIAAQYAG 182

Query: 110 --------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                   ++ E  AI+AG+  L +A +I+++  T    +   + + S+        M+ 
Sbjct: 183 GTAPADGARFGEAAAILAGDLALAWADDIVAATLTTPDTDRAVRELWSVMRT----EMVA 238

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK----ERLRCFGENL 217
           GQ LDIQ +      +    +        ++ E    +  A           L   G  +
Sbjct: 239 GQYLDIQGQATSSRSLARAIRAACLKSALYSVERPLALGAALAGADAARTRALCSAGRCV 298

Query: 218 GIIFQLADDLLDCEE 232
           GI FQL DDL D   
Sbjct: 299 GIAFQLRDDLGDVFG 313


>gi|119962314|ref|YP_946137.1| geranylgeranyl pyrophosphate synthase [Arthrobacter aurescens TC1]
 gi|119949173|gb|ABM08084.1| putative geranylgeranyl pyrophosphate synthase [Arthrobacter
           aurescens TC1]
          Length = 369

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/252 (24%), Positives = 93/252 (36%), Gaps = 36/252 (14%)

Query: 16  IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV------ 67
           I+  L  L+ + AS       D  RL +     +LGGK +R  L+ E     +       
Sbjct: 18  IENELSGLIDKRASAATAYGADFARLWALAGQNVLGGKFVRPLLLMETYDALHKHGPAEP 77

Query: 68  -NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV-----------HIQYDEVT 115
               TA+ + AAIE +H   L+HDD+  +D   +RRG P +                   
Sbjct: 78  HQRETAISIAAAIELLHYAFLLHDDV--IDGDLVRRGHPNLIGSLLAEAGETARTDGADG 135

Query: 116 A-------------IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           A             I+ G+ LL    +  +  +   +  +R   +L  T N  + G    
Sbjct: 136 ARAGSGLHWAQTGGILMGDMLLAATHQAFARAELPHELRLRLLDLLEHTINETVAGEQLD 195

Query: 163 QMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
             L       D   + M+   KT          + A +A A    +  L   G +LG+ F
Sbjct: 196 VGLGDGIIAPDLQTILMMCGYKTATYTFELPLRAAATLAGADFAVENALATAGRHLGLAF 255

Query: 222 QLADDLLDCEED 233
           QL DDLL    D
Sbjct: 256 QLQDDLLSTFGD 267


>gi|150021241|ref|YP_001306595.1| polyprenyl synthetase [Thermosipho melanesiensis BI429]
 gi|149793762|gb|ABR31210.1| Polyprenyl synthetase [Thermosipho melanesiensis BI429]
          Length = 332

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 23/233 (9%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-H 69
           ++ K+ID  +  ++ +  + + +   + +    ++ L  GK+IR  L       F     
Sbjct: 9   KHVKKIDEAIGKVIDE--NSLNSPVGNLVEELKKFCLRPGKRIRPLLFILGVEGFGGKVD 66

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------QYDEVTA 116
            T  ++ A IE +H + LIHDD+  MD   +RRG+P++H              +  E  A
Sbjct: 67  ETVYKIAATIEIMHSFLLIHDDI--MDQSELRRGQPSMHNLLANKFKDRSFNPKIGEDLA 124

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L      ++S            +       N G   +L       ++    E  
Sbjct: 125 LVLGDILFFIGLRVLSRLNIPY---FFLEKFSECYINTGYGQILDVIYSMNRNYVRSEKI 181

Query: 177 VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              I K+KT      +    G +    +   ++ +       GI FQ+ DD++
Sbjct: 182 SLEISKLKTAYYTFFYPFYLGTVFTGGNVG-RKLIEDIMIPAGIAFQIRDDII 233


>gi|313837485|gb|EFS75199.1| polyprenyl synthetase [Propionibacterium acnes HL037PA2]
 gi|314929303|gb|EFS93134.1| polyprenyl synthetase [Propionibacterium acnes HL044PA1]
 gi|314971692|gb|EFT15790.1| polyprenyl synthetase [Propionibacterium acnes HL037PA3]
 gi|328906969|gb|EGG26735.1| geranylgeranyl pyrophosphate synthase [Propionibacterium sp. P08]
          Length = 365

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 87/252 (34%), Gaps = 28/252 (11%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTE---CASL 64
            +    I+  +   L      +     +   +L A R    GGK++R          A+ 
Sbjct: 12  ADFRDSINARISSFLDNERRGIDAIGTELSPVLDAARDYTGGGKRLRPAFCYWGHVAAAG 71

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------- 111
             V     L+   ++E +H  +L+HDDL  +D+   RRG P+ H ++             
Sbjct: 72  QPVAPSGLLQAAGSLEFLHVSALVHDDL--IDHSNTRRGLPSAHRRFEAAHVTAHGDGSA 129

Query: 112 ---DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  AI+ G+ LL ++ ++ +S   +      +  +          G +        
Sbjct: 130 EQFGFDVAILLGDLLLMWSSQMFTSAPVEADRLAAAIPLFDAMRTEVTCGQVLDVTSQSG 189

Query: 169 DEFIDETQVF----MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               D          + + K     +    + G  +A  S   ++ +  FG  +G  FQ 
Sbjct: 190 MAGSDSESALDLVGRVVEYKCASYTVVRPSQIGVALAGGSSRLQQTMADFGSPIGRAFQY 249

Query: 224 ADDLLDCEEDLP 235
            DDLL    D  
Sbjct: 250 RDDLLGVFGDAE 261


>gi|119094157|gb|ABL60987.1| geranylgeranyl pyrophosphate synthetase CrtE [uncultured marine
           bacterium HF10_19P19]
          Length = 338

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 101/241 (41%), Gaps = 20/241 (8%)

Query: 1   MNGGLPSKLQE--NSKRIDTI--LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRS 55
           M   + S++ E   ++++D +  L  +L              L +A ++     GK++R 
Sbjct: 1   MTENIASQVNEMQGAEKLDALPDLSAVLSAFIVRRLPSGKHPLATAAQHHFKRTGKQLRG 60

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            +       F V    +L   AA+E +H  SL+HDD+   D   +RRG P+V   Y   T
Sbjct: 61  RMALAAGDSFGVPRTASLPWAAAVEVLHNASLVHDDIC--DGDMVRRGAPSVWAFYGRDT 118

Query: 116 AIIAGNGLLTYAFEIISSPK----TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           A+  G+ L+  +FE+ +       T    +I S+ M + T    L+  +          +
Sbjct: 119 ALALGDWLIALSFELAAEAAYLGQTPQLVSILSRHMAATTAGQALEFEVRA--------Y 170

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            D +    I   KT  L   + E  A +A   ++    L  F    G  +Q+A+D+L+  
Sbjct: 171 PDWSGYMDISTGKTAPLFIASVEGIAHLAG-RRDAIRPLNRFFSAAGGCYQIANDMLNVI 229

Query: 232 E 232
            
Sbjct: 230 G 230


>gi|294085694|ref|YP_003552454.1| polyprenyl synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665269|gb|ADE40370.1| Polyprenyl synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 340

 Score =  125 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 17/215 (7%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            +    L  A R+     GK +R+ +    A L  ++   AL    +IE +H  SLIHDD
Sbjct: 38  PKDGTPLADAARHHFAKPGKMLRAKMALSAAKLLKIDQAAALHWSTSIEVLHNASLIHDD 97

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +   D   +RRG+  V  +Y    A+  G+ L+  +FE+ +    +    +  + +L+  
Sbjct: 98  IC--DGDKMRRGRVAVWAKYGRDVALTLGDWLIALSFELAAEAAQRANTPMLVK-ILAKH 154

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
                 G      +              I   KT  L+    E  A MA         + 
Sbjct: 155 MATTTAGEAAEFSIQS---SYSWDHYLRIAGDKTAPLLTAPLEGIAAMALHGDA-AGAIG 210

Query: 212 CFGENLGIIFQLADDLL---------DCEEDLPKK 237
            +  +LG  +Q+A+D+L         DC  DL ++
Sbjct: 211 SYFRHLGEAYQIANDILNFRAGDGAADCGSDLARR 245


>gi|326781297|ref|ZP_08240562.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326661630|gb|EGE46476.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 425

 Score =  125 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 91/237 (38%), Gaps = 27/237 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVG 76
            +L + + +  +      ++       + L GGK++R  L+              ALR+G
Sbjct: 52  AVLAERMDEAMASDALFCDELARRVADFTLDGGKRVRPRLLWWGMRSCGAAETTAALRLG 111

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAG 120
            A+E I   +LIHDD+  MD   +RRGKP VH                  +    A++AG
Sbjct: 112 VALELIQSCALIHDDV--MDRSRLRRGKPAVHIGLAERAGYSPDSGRGSAFGASAAVLAG 169

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +  L +A + ++          R   +           M+ GQ LD++ +    + V   
Sbjct: 170 DLALAWADDTVAETALSAVQRRRIGPLWRAMRT----EMVAGQYLDLRGQVSGGSSVEQA 225

Query: 181 QKMKTGALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +        ++ E    +  A     +   + LR  G   GI FQL DDLL    D
Sbjct: 226 LRTACLKSASYSVERPLALGAALAGADEATTDALRSAGRCAGIAFQLRDDLLGVFGD 282


>gi|256832658|ref|YP_003161385.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
 gi|256686189|gb|ACV09082.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
          Length = 368

 Score =  125 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 27/220 (12%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLF-----NVNHLTALRVGAAIECIHCYSLIHDDLP 93
           L++A R    GGK++R+ L+             ++      VGAA+E     +L HDD+ 
Sbjct: 45  LMTAWRSLTSGGKRVRALLMYHVFRGIESGRSGLSDEDLYGVGAALELFQAAALFHDDV- 103

Query: 94  SMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            MD    RRG+PTVH                  Y +  AI+ G+  L  + ++  S    
Sbjct: 104 -MDRSDTRRGEPTVHRVFAQRHRTSQWVGDPDLYGQSAAILLGDLSLVASEQLFRSATAP 162

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQDEFIDETQVFMIQKMKT-GALMCFAC 193
            +   R++        I   G       Q++ + D+     +   +   KT    +    
Sbjct: 163 GQHRSRARDHFDAMRMIVTVGQFMDTHAQVVPLSDDDDAMQRALDVIATKTTHYSVVAPL 222

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             GA +A A     E+LR FG+ LG  FQL DD L    D
Sbjct: 223 LIGAALAGAPTRVDEQLRAFGQPLGTAFQLIDDDLGLYGD 262


>gi|148270387|ref|YP_001244847.1| polyprenyl synthetase [Thermotoga petrophila RKU-1]
 gi|147735931|gb|ABQ47271.1| Polyprenyl synthetase [Thermotoga petrophila RKU-1]
          Length = 298

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 11  ELEKVKERIEQILSRFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 56

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 57  EISEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 114

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +  +I + K+G
Sbjct: 115 AFYTVEEIGNDRLRRTFLNVIRRMSEAELIEQL-------SRYKPITKEEYLLIVEGKSG 167

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A+         E L   G  +G I+Q+ DD++D   
Sbjct: 168 ALFGLALQLPALFEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 210


>gi|73654128|gb|AAZ79359.1| farnesyl diphosphate synthase [Citromicrobium sp. JL-364]
          Length = 146

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 4/136 (2%)

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG+PT HI +DE TAI+AG+ L   AF  ++     L + +R  ++  L    G  G
Sbjct: 12  ELRRGRPTTHIAFDEATAILAGDALQALAFGWLAEA-PGLPEPVRLIMVRELARASGHGG 70

Query: 159 MLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGE 215
           M+GGQ +D++   + +   Q+  + + KTGAL+  +   GA+ A   S+     L  + +
Sbjct: 71  MVGGQAIDLESVGKNLALAQLETMHRHKTGALIETSVRIGALTAPSVSEQALASLTEYAK 130

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ DD+LD E
Sbjct: 131 ALGLAFQVQDDILDVE 146


>gi|325676958|ref|ZP_08156630.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707]
 gi|325552258|gb|EGD21948.1| polyprenyl synthetase [Rhodococcus equi ATCC 33707]
          Length = 389

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 98/246 (39%), Gaps = 34/246 (13%)

Query: 16  IDTILDDLLLQTASHMQTQ---HNDRLLSAIRYALLGGKKIRSFLVT-----ECASLFNV 67
           ++  L +     A  ++T    + + + +   + L GGK++R   V              
Sbjct: 42  VEDALREFFASRAGTVETVGGGYAEAVAALESFVLRGGKRVRPMFVWTGWLGAGGDATGP 101

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQY 111
               ALR  +A+E +   +L+HDD+  +D    RRG PTVH                 ++
Sbjct: 102 EAPAALRAASALELVQACALVHDDI--IDASTTRRGFPTVHVEFADQHSAHHWSGGSAEF 159

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
               AI+ G+  L +A ++I           R   + S         +LGGQ LDI  E 
Sbjct: 160 GRAVAILLGDLALAWADDMIREAGLSPDAQARISPVWSAMRT----EVLGGQFLDISSEV 215

Query: 172 IDETQVF---MIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             +  V     + + KT A  +      GA +A A        R FG ++GI FQL DDL
Sbjct: 216 RGDETVEAALRVDRYKTAAYTIERPLHLGAALAGADDALVAAYRTFGTDIGIAFQLRDDL 275

Query: 228 LDCEED 233
           L    D
Sbjct: 276 LGVFGD 281


>gi|320103110|ref|YP_004178701.1| polyprenyl synthetase [Isosphaera pallida ATCC 43644]
 gi|319750392|gb|ADV62152.1| Polyprenyl synthetase [Isosphaera pallida ATCC 43644]
          Length = 364

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 20/244 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASL---- 64
           E+  RID  L  +  QT        Q    +  A+++ L GGK+IR  L      +    
Sbjct: 21  EDRARIDARLTRVFDQTRRRYACNPQVAPLVEEALKFTLEGGKRIRPRLCLAAYRILTQR 80

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---------- 114
           F         V   +E +H + L+HDDL  MD    RR +PT+H +Y E           
Sbjct: 81  FEPPPAPVWNVAVVLEALHAFMLVHDDL--MDQSLTRRDRPTLHERYREGLNVSARTAGD 138

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-EFID 173
             I+AG+ +   A  ++     Q     R   +++        G     + D +  E I 
Sbjct: 139 LGIVAGDWMFALAIRMLGRAGLQGTRLARVVRIIAEMLIETGLGQSLDLLHDGRSLESIT 198

Query: 174 ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           E  +  + + KT    +      GA +A+A    +  L  FG+ LG  +Q+ +DL   E+
Sbjct: 199 EEDITTLYRWKTARYTVSGPLVLGAALANAPAATRRCLNRFGDLLGFGYQICNDLESLED 258

Query: 233 DLPK 236
           DL +
Sbjct: 259 DLER 262


>gi|229891676|sp|P0C9E2|TPRT_ASFK5 RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
          Length = 318

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 93/245 (37%), Gaps = 36/245 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAIE------DGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H             A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  +  
Sbjct: 160 LALTMQGFQNICRQVDWIKENCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPE-- 215

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                       KT      A   G ++   +  +   +       G  FQLADD+ D +
Sbjct: 216 ------------KTIPFFKIAFIMGWVLGTGTIEDIGAIERAAHCFGNAFQLADDIKDHD 263

Query: 232 EDLPK 236
            D  +
Sbjct: 264 TDTGR 268


>gi|226356385|ref|YP_002786125.1| polyprenyl synthetase [Deinococcus deserti VCD115]
          Length = 341

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 14/195 (7%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           Y   GGK IRS L+   A    V H T     A  + A +E    + LIHDD+   D+  
Sbjct: 44  YPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDIQ--DDSE 101

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRG+P +H  Y    AI  G+ L  Y +  +             +  L++ H       
Sbjct: 102 ERRGQPALHRLYGVPLAINVGDALHAYMWAAVHRAGVPGA----MEEFLTMIHRTAEGQH 157

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           L    ++ ++  + E     + ++KT    +      GA+ A             G  LG
Sbjct: 158 LDLSWVEHREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPA--SAFTNAGLALG 215

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DD+L+   D
Sbjct: 216 SAFQIRDDVLNLLGD 230


>gi|302549101|ref|ZP_07301443.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
 gi|302466719|gb|EFL29812.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
          Length = 350

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 2/188 (1%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A  GGK +R  L    A +        +    A+E +H +SL+HDD+  MD    RR +P
Sbjct: 66  AAPGGKGVRQALAVLGAEVAGAPARAGVAAAVAVELVHTFSLLHDDI--MDGDADRRRRP 123

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            V   Y    A++AG+ L   A E +++     +        L          +L  +  
Sbjct: 124 AVWKAYGTGPAVLAGDALFALAVETLAAQPGGAEAVRTLSAALGDLVRGQADDLLFTERP 183

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               E +   +   + + KTGAL+  A   GA +  A+      L   G +LGI FQ+ D
Sbjct: 184 WTGPERVRPDEYRAVAEHKTGALLGCAAALGAALGGAAPETVAALDRVGRHLGIAFQIVD 243

Query: 226 DLLDCEED 233
           D+L    D
Sbjct: 244 DVLGIWGD 251


>gi|281412693|ref|YP_003346772.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
 gi|281373796|gb|ADA67358.1| Polyprenyl synthetase [Thermotoga naphthophila RKU-10]
          Length = 299

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSRFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EISEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +  +I + K+G
Sbjct: 116 AFYTVEEIGNDRLRRTFLNVIRRMSEAELIEQL-------SRYKPITKEEYLLIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A+         E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALFEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|312140160|ref|YP_004007496.1| polyprenyl synthase [Rhodococcus equi 103S]
 gi|311889499|emb|CBH48816.1| putative polyprenyl synthase [Rhodococcus equi 103S]
          Length = 373

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 98/246 (39%), Gaps = 34/246 (13%)

Query: 16  IDTILDDLLLQTASHMQTQ---HNDRLLSAIRYALLGGKKIRSFLVT-----ECASLFNV 67
           ++  L +     A  ++T    + + + +   + L GGK++R   V              
Sbjct: 26  VEDALREFFASRAGTVETVGGGYAEAVAALESFVLRGGKRVRPMFVWTGWLGAGGDATGP 85

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQY 111
               ALR  +A+E +   +L+HDD+  +D    RRG PTVH                 ++
Sbjct: 86  EAPAALRAASALELVQACALVHDDI--IDASTTRRGFPTVHVEFADQHSAHHWSGGSAEF 143

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
               AI+ G+  L +A ++I           R   + S         +LGGQ LDI  E 
Sbjct: 144 GRAVAILLGDLALAWADDMIREAGLSPDAQARISPVWSAMRT----EVLGGQFLDISSEV 199

Query: 172 IDETQVF---MIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             +  V     + + KT A  +      GA +A A        R FG ++GI FQL DDL
Sbjct: 200 RGDETVEAALRVDRYKTAAYTIERPLHLGAALAGADDALVAAYRTFGTDIGIAFQLRDDL 259

Query: 228 LDCEED 233
           L    D
Sbjct: 260 LGVFGD 265


>gi|307103628|gb|EFN51886.1| hypothetical protein CHLNCDRAFT_49140 [Chlorella variabilis]
          Length = 312

 Score =  124 bits (313), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 14/180 (7%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASL------FNVNHLTALRVGAAIECIHCYSL 87
           +H   L +A +    GGK++R  +V   A         +       R+    E +H  SL
Sbjct: 26  RHPMLLAAANQIFSAGGKRLRPLIVLLVARATFPLTGLSDITERHRRLAEISEMLHTASL 85

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +HDD+  +D   +RRGK TV+  Y    A++AG+ L   +   +++        + SQ++
Sbjct: 86  VHDDV--LDECDVRRGKETVNSLYGTRVAVLAGDFLFAQSSWFLANLDNMEVIKLISQVI 143

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
                          Q   + D +ID  +       KT +L+  +C S A+ +      +
Sbjct: 144 ADFADGEIS------QAASLFDAYIDLRRYLDKSFWKTASLIAASCRSAAVFSDCDTEAR 197


>gi|171742640|ref|ZP_02918447.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC
           27678]
 gi|171278254|gb|EDT45915.1| hypothetical protein BIFDEN_01754 [Bifidobacterium dentium ATCC
           27678]
          Length = 391

 Score =  124 bits (313), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 26/251 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL---GGKKIRSFLVTEC 61
            + L++   RI  ++ D +   A          +  A+ R A+    GGK++R+ L  + 
Sbjct: 36  STDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLTLDS 95

Query: 62  ASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------ 109
             +F  +          L +  A+E     +L+HDD+  +D+  +RRG+P+ H       
Sbjct: 96  FRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRRGRPSAHRALASGT 153

Query: 110 ---QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                     I+ G+ L T + +I +    +L  +          H     G +    ++
Sbjct: 154 HSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAVE 213

Query: 167 IQDEFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIF 221
           +      E  V     + + KT         E G + A    +    L    G  LG+ F
Sbjct: 214 LNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLAMSIGLPLGLAF 273

Query: 222 QLADDLLDCEE 232
           QLADDLLD   
Sbjct: 274 QLADDLLDVIG 284


>gi|332797814|ref|YP_004459314.1| polyprenyl synthetase [Acidianus hospitalis W1]
 gi|332695549|gb|AEE95016.1| polyprenyl synthetase [Acidianus hospitalis W1]
          Length = 282

 Score =  124 bits (313), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 19/229 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L E  +R   I+D L+ +    ++      ++   +Y +  GK+ R  LV          
Sbjct: 3   LIEFWERSKVIIDSLVTKFVDDVKDWE---IMEMSKYIMKDGKRFRGTLVFLFNDALGGE 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A +   A E +H  SL  DD+  +D    RRG  +    Y     I   N L+  A 
Sbjct: 60  EKNAYQGALATEILHSASLALDDI--VDYDLTRRGMASAWAVYTNRRVIFVSNFLIPTAL 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           +IISS     K+ +   + L     IG           ++D + D+ + F   ++KT +L
Sbjct: 118 KIISSYG---KEALNISIELWKDTAIGA----------LKDMYGDKREYFKTIELKTASL 164

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
                   A  +   +   ++L   G  LG+I+QL DD +DC +  P+K
Sbjct: 165 FKLPAML-ASFSSGKKELVDKLLEAGRVLGVIYQLIDDYVDCVKLEPEK 212


>gi|50955160|ref|YP_062448.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50951642|gb|AAT89343.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 372

 Score =  124 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 83/260 (31%), Gaps = 42/260 (16%)

Query: 16  IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLF-------- 65
           I + LD  L   AS + +   +   +    R  L GGK+ R+                  
Sbjct: 11  IQSRLDGFLDARASILVSIAEELSPIAEFSRDFLSGGKRFRALFCFWGWQAVRTSGEDAT 70

Query: 66  ------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-------- 111
                        + V +A+E  H  +L+HDDL  +DN   RRG P+VH ++        
Sbjct: 71  DETVTAGGPLDAVVSVASALELFHAAALVHDDL--IDNSDTRRGAPSVHRRFESLHDSEK 128

Query: 112 --------DEVTAIIA-------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
                       A +         + L         SP  +         M         
Sbjct: 129 WSGCGKSFGTGAATLLGDLLLILSDELFEEGIGQTVSPAARRAARAEFNRMRIDVTAGQY 188

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGE 215
             +        + +     +   +   K+    +      GA +A A+  + + L  FG 
Sbjct: 189 LDLFEEIGWAGRHDADQLARAERVIVYKSAKYSIESPLLIGASLAGANVGQLDALGGFGL 248

Query: 216 NLGIIFQLADDLLDCEEDLP 235
            LGI +QL DDLL    D  
Sbjct: 249 PLGIAYQLRDDLLGVFGDAA 268


>gi|46015923|pdb|1V4J|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima V73y Mutant
 gi|46015924|pdb|1V4J|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima V73y Mutant
          Length = 299

 Score =  124 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E  H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELYHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|320006972|gb|ADW01822.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 392

 Score =  124 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 32/247 (12%)

Query: 13  SKRIDTILDDLL---LQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFL--VTECASLFN 66
           +  +D +L + L   L  A        D + S    + L GGK++R+        A+  +
Sbjct: 34  AAAVDAVLAEHLRTRLGEARRTDAVFADEVASRVAAFVLQGGKRLRTAFVRCGWLAAGGS 93

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------DEVT- 115
            +  T LRVGAA+E +   +L+HDD+  MD   +RRG P VH Q+             T 
Sbjct: 94  GDPGTPLRVGAALELLQACALVHDDV--MDESPVRRGAPAVHAQFARLHREGRMRGSATS 151

Query: 116 -----AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
                A++AG+  L +A ++++               L          M+ GQ LD++ +
Sbjct: 152 YSATAAVLAGDLALVWADDLLTETALSSPYG----GHLHREWQAMRGEMVAGQYLDMRAQ 207

Query: 171 FI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                DETQ   I  +K+    +      GA +A A     + LR  G   G+ FQL DD
Sbjct: 208 ATGSSDETQARNIATLKSALYTVERPLALGACLAGAGAPVMDALRSAGRCAGLAFQLHDD 267

Query: 227 LLDCEED 233
           LL    D
Sbjct: 268 LLGAFGD 274


>gi|163849265|ref|YP_001637309.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222527256|ref|YP_002571727.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
 gi|163670554|gb|ABY36920.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222451135|gb|ACM55401.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
          Length = 361

 Score =  124 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 8/149 (5%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDDL  +D    RRG+ TVH ++D   A++ G+     A   ++           ++
Sbjct: 120 SLVHDDL--VDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPRIITFYAE 177

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + ++         +       +       Q       KT  L   AC++G +    S  
Sbjct: 178 AVQTICEGELSPVTVA------EPFDKALRQYLYKTGAKTAVLFEAACKAGMVAGGGSDE 231

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDL 234
           E   L  +G +LG+ FQ+ DD+LD   D 
Sbjct: 232 EIAALGSYGYDLGMAFQIIDDVLDFIGDE 260


>gi|269219432|ref|ZP_06163286.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211128|gb|EEZ77468.1| polyprenyl synthetase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 363

 Score =  124 bits (312), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 94/257 (36%), Gaps = 31/257 (12%)

Query: 6   PSKLQENSKRIDTI----LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
            S L+E  + +       LD            +     L   R  L GGK+ R+ L+   
Sbjct: 4   KSALEELREDVSARACACLDRARELIDFPGDAESLGEFLDPARRLLSGGKRTRAALLAAG 63

Query: 62  AS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------- 110
            +     +   A+  GAA E     +LIHDD+  +D    RR +P+ H+           
Sbjct: 64  YACATAEDREPAISAGAAAELYQTSALIHDDI--LDAASTRRSQPSAHVALARLHLSGGW 121

Query: 111 ------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                 +   +AI+ G+ LL+ + E  +    Q+    R+              +  GQ 
Sbjct: 122 SGDRAHFGTSSAILLGDFLLSLSTEAFADACAQVGP--RASRAALRAFARMTTEVAFGQY 179

Query: 165 LDIQDEFIDETQ-----VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           LDI+ E              +   K+    + F    GA++A AS +  + L   G  LG
Sbjct: 180 LDIRAENAPPAADSVGAALSVVAHKSARYSVVFPLRIGALLAGASGDVLDLLERVGAPLG 239

Query: 219 IIFQLADDLLDCEEDLP 235
             FQL DD L    D  
Sbjct: 240 EAFQLRDDDLGVFGDEE 256


>gi|119964435|ref|YP_947457.1| polyprenyl synthetase [Arthrobacter aurescens TC1]
 gi|119951294|gb|ABM10205.1| putative polyprenyl synthetase [Arthrobacter aurescens TC1]
          Length = 364

 Score =  124 bits (312), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 94/257 (36%), Gaps = 27/257 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVT 59
              + ++  +    +   L   L +    M T   D   L+ +I   + GGK++R+ +  
Sbjct: 4   TSHVTAEQTQFINGVAGKLSGFLSEQQDLMATVSPDVEPLIGSISNLVTGGKRLRALMCY 63

Query: 60  ECASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------ 111
                          +  G A+E     +LIHDD+  +D    RRG P+VH ++      
Sbjct: 64  WGWRGAGGPAGDPDIITAGCALELFQAAALIHDDI--IDRSDTRRGGPSVHKRFNQLHEM 121

Query: 112 ----------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG--- 158
                      +  AI+ G+  L+++ E  +    +      ++ + ++     + G   
Sbjct: 122 NGWALDSGRFGDAAAILTGDLCLSFSEESFTEIGHRAAAGSPARRIFNVMRAEVMAGQYL 181

Query: 159 -MLGGQMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGEN 216
            +L      ++D      +   I + K+           G  +A A +   +    F   
Sbjct: 182 DILEEVAGPVRDRAGSVERAKSIIRYKSAKYSTEHPLALGGALAGAPEGLLKGYSEFSLP 241

Query: 217 LGIIFQLADDLLDCEED 233
           LG  FQ+ DD+L    D
Sbjct: 242 LGEAFQMRDDVLGVFGD 258


>gi|62959171|gb|AAY23693.1| farnesyl diphosphate synthase [Erythrobacter longus]
          Length = 147

 Score =  124 bits (312), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 4/136 (2%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +R GK T+H  YDE TA++AG+ L   AFEI++   T     +RS+L+ +L    G+ GM
Sbjct: 12  LRHGKATLHHVYDEATAVLAGDALHALAFEILADHGTSSDPFVRSELIATLGTASGMNGM 71

Query: 160 LGGQMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
            GGQM+D+    +    D   +  +Q++KTGAL+  A E GA++       +  LR +  
Sbjct: 72  AGGQMMDMVADEEGVTYDLQAITRLQQLKTGALLSCAVEMGAVLGKVPVEGRAHLRAYSR 131

Query: 216 NLGIIFQLADDLLDCE 231
           ++G+ FQ+ADD+LD E
Sbjct: 132 DIGLAFQIADDILDVE 147


>gi|321261930|ref|XP_003195684.1| trans-hexaprenyltranstransferase [Cryptococcus gattii WM276]
 gi|317462158|gb|ADV23897.1| trans-hexaprenyltranstransferase, putative [Cryptococcus gattii
           WM276]
          Length = 483

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 9/162 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+ +  E IH  SL+HDD+  +D   +RRG P+    +    +I++G+ LL  A   ++ 
Sbjct: 220 RLASITEMIHVASLLHDDV--IDASSLRRGTPSAPSTFGNKLSILSGDFLLGRASVALAR 277

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
             ++    + + ++ +L     +  +      +                +KT +LM  + 
Sbjct: 278 LGSREVVELLATVIANLVEGE-VMQLRATSEPEKAPTTKGFEDYMRKTYLKTASLMAKSA 336

Query: 194 ESGAIMAHA---SQN---EKERLRCFGENLGIIFQLADDLLD 229
            +  ++      ++     K+    +G NLGI FQL DD LD
Sbjct: 337 RAAVVLGGCGSVNEEGAWVKDVAYGYGRNLGIAFQLIDDALD 378


>gi|315271285|gb|ACO46371.2| putative Polyprenyl synthetase [Deinococcus deserti VCD115]
          Length = 329

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 14/195 (7%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           Y   GGK IRS L+   A    V H T     A  + A +E    + LIHDD+   D+  
Sbjct: 32  YPQRGGKGIRSELLLASAQAHGVAHDTDAWDQAQWLAAGLELFQNWVLIHDDIQ--DDSE 89

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
            RRG+P +H  Y    AI  G+ L  Y +  +             +  L++ H       
Sbjct: 90  ERRGQPALHRLYGVPLAINVGDALHAYMWAAVHRAGVPGA----MEEFLTMIHRTAEGQH 145

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           L    ++ ++  + E     + ++KT    +      GA+ A             G  LG
Sbjct: 146 LDLSWVEHREWKLREADYLEMVQLKTAHYTVIVPLRLGALAAGVQPA--SAFTNAGLALG 203

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DD+L+   D
Sbjct: 204 SAFQIRDDVLNLLGD 218


>gi|212715644|ref|ZP_03323772.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661011|gb|EEB21586.1| hypothetical protein BIFCAT_00544 [Bifidobacterium catenulatum DSM
           16992]
          Length = 394

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 26/251 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTEC 61
            S L++   RI +++ D                +   +      +  GGK++R+ L  + 
Sbjct: 36  SSDLEQIESRIVSLVKDFAFLHVDDSVASSCKPIADMVAMQAVTSSEGGKRLRALLTLDS 95

Query: 62  ASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
              F        +    L +  A+E     +L+HDD+  +D+  +RRGKP+ H  +   T
Sbjct: 96  FRAFASEDVLERDFDALLDLACAVEVFQTGALVHDDI--IDDSDLRRGKPSAHRAFSTDT 153

Query: 116 AI-IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQMLD---I 167
                G+GL     +++++    + D   S+L         L  M      GQ+LD    
Sbjct: 154 HSETIGHGLGIMLGDMLATASVDIADKAASKLTYGSNVVAALLNMHREVEVGQVLDLAVE 213

Query: 168 QDEFIDETQV----FMIQKMKTG-ALMCFACESGAIMAHASQNEKER-LRCFGENLGIIF 221
            +   D  ++      + + KT         E G + A  S+++  R     G  LG+ F
Sbjct: 214 LNPLNDPNELVEASLNVFRWKTASYTTIAPLEFGMLAAGLSKDDARRHALAVGLPLGLAF 273

Query: 222 QLADDLLDCEE 232
           QLADDLLD   
Sbjct: 274 QLADDLLDVVG 284


>gi|2644975|emb|CAA05825.1| IspA protein; partial [Wolinella succinogenes]
          Length = 163

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 7/164 (4%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT-ECASLFNV 67
           L+   +  +  L++            +N+ L   +R    GGK+ R  L+    ++L  +
Sbjct: 3   LESVMEGFERFLEE-EAPLFEGFHPHYNEYLWEMVR---NGGKRFRPRLLLGVVSALAPL 58

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
              +A     A+E +H YSLIHDDLP+MDN   RRG PT+H++YDE +A++AG+ L T+A
Sbjct: 59  LVKSAYAPALALEILHTYSLIHDDLPAMDNAATRRGHPTLHVKYDEASAVLAGDALNTHA 118

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           F +++     L  + +  L+  L    G  GM+ GQ LD   E 
Sbjct: 119 FYLLAQA--PLGSDTKVALVRELASAGGAGGMVLGQALDCYFEH 160


>gi|296166038|ref|ZP_06848487.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898603|gb|EFG78160.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 349

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 28/227 (12%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYS 86
           +++ + + D + +   + L GGK++R                    L + +A+E +H  +
Sbjct: 21  AYIGSDYEDLVAALEDFVLNGGKRLRPAFAYWGWRAVATGEPDSEVLLLFSALELLHACA 80

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFEI 130
           L+HDD+  +D+   RRG+PT H+++                    AI+ G+  L++A +I
Sbjct: 81  LVHDDV--IDDSATRRGRPTTHVRFADLHRARRWRGSPERFGMSAAILLGDLALSWADDI 138

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +   +       R Q + +         +LGGQ LDI  E      +     + T    C
Sbjct: 139 VFRAELSPGAARRVQRVWAEIRT----EVLGGQYLDIVAEASGAESIASAMNVDTYKTAC 194

Query: 191 F----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +      + GA  A    + ++    FG ++G+ FQL DD+L    D
Sbjct: 195 YTVSRPLQLGAAAAADRPDVQDVFGRFGTDIGVAFQLRDDVLGVFGD 241


>gi|239933102|ref|ZP_04690055.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           ghanaensis ATCC 14672]
          Length = 463

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 97/242 (40%), Gaps = 30/242 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV----NHLT 71
           +D +L D + +  +      +D      R+   GGK++R   V             +   
Sbjct: 73  LDHVLADRVARARAVDPLFGDDLAERVARFTRTGGKRVRPRFVWWTLRACGGGDGPSVAA 132

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVT 115
           ALR+GAA+E +   +L+HDD+  MD   +RR +P +H+                +     
Sbjct: 133 ALRIGAALELLQTCALVHDDV--MDGSTLRRARPALHVDVAAQYGGAAPSARAERLGGAA 190

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--- 172
           AI+AG+  L +A ++++      +     + + +         M+ GQ LD+  +     
Sbjct: 191 AILAGDLALAWADDLLAETPLAPRSARAVRRLWADMRT----EMVAGQYLDVHGQATGSR 246

Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              +      +K+    +      GA +A A    +E L   G   G+ FQL DDL D  
Sbjct: 247 SLPRALHAACLKSALYSVERPIALGAALADADDATREALGSAGRCAGLAFQLRDDLDDVF 306

Query: 232 ED 233
            D
Sbjct: 307 GD 308


>gi|227538590|ref|ZP_03968639.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241509|gb|EEI91524.1| possible trans-hexaprenyltranstransferase [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 201

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 10/207 (4%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFN 66
           KL +  K I   L     +  + MQ+     L     Y +   GK++R   V   A L  
Sbjct: 3   KLNDIQKPIANELAAFEHKFKASMQSSVP-LLDRITHYIVKRKGKQMRPMFVFFSAGLCG 61

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
             + +  R  + +E +H  SL+HDD+  +DN   RRG  +V+  +    A++ G+ LL+ 
Sbjct: 62  SINESTFRGASLVELLHTASLVHDDV--VDNANERRGFFSVNALWKNKVAVLVGDFLLSK 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
              +     +   ++     ++S       +G L  Q+   +   I+E+  F + + KT 
Sbjct: 120 GLLL-----SVDNNDFHLLKIVSEAVEQMSEGELL-QIEKARKLDIEESVYFEVIRQKTA 173

Query: 187 ALMCFACESGAIMAHASQNEKERLRCF 213
           +L+   C  GA          ++  CF
Sbjct: 174 SLIASCCACGAASTDVDARNCKKNACF 200


>gi|67476710|ref|XP_653910.1| geranylgeranyl pyrophosphate synthase [Entamoeba histolytica
           HM-1:IMSS]
 gi|56470952|gb|EAL48563.1| geranylgeranyl pyrophosphate synthase, putative [Entamoeba
           histolytica HM-1:IMSS]
          Length = 349

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 95/253 (37%), Gaps = 44/253 (17%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +++    ++  L ++  +        Q     +  +   ++G GK++R   +        
Sbjct: 1   MEQLVLLVEEKLKEIFEEERKRSTCHQFQAECIDIMEKFVMGPGKRLRPLSLLLFFIGGG 60

Query: 67  V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV---------------- 107
                    +R   A+E +H  +L HDD+  MD   +RR  PT+                
Sbjct: 61  GKIEEQKNIIRTACAMELLHDSTLAHDDI--MDEDEMRRNAPTIVKTFYDKYIERNKEDV 118

Query: 108 ----------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                        Y    AI+ GN L + A  +     T +     ++++L L       
Sbjct: 119 KTEKFLFMSRGTTYASSLAIMTGNILYSMAQRLCLESGTNI-----AEMVLELFSV---- 169

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            +  GQ+LD+      E     I  MKT          G  +A  S+++ E  + +GE+ 
Sbjct: 170 -LNYGQILDMSGLNTVEEYNLNII-MKTAIFFKTTASIGLTLAGRSEHDIELGKEWGEHF 227

Query: 218 GIIFQLADDLLDC 230
           GI FQ+ DDLLD 
Sbjct: 228 GIAFQMRDDLLDI 240


>gi|62959167|gb|AAY23691.1| farnesyl diphosphate synthase [Roseobacter litoralis Och 149]
          Length = 144

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 7/135 (5%)

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+PTVH ++D+ TA++AG+ L T AFE+++ P       +R+ L LSL    G QGM+
Sbjct: 13  RRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASPSAEVRADLALSLARASGAQGMV 72

Query: 161 GGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            GQ LDI  E     +   ++  +Q+ KTGAL+ ++ ++GA +A A       L+ + + 
Sbjct: 73  LGQALDIAAETAHTPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTG---ALKRYAQA 129

Query: 217 LGIIFQLADDLLDCE 231
           LG+ FQ+ADD+LD E
Sbjct: 130 LGLAFQIADDILDVE 144


>gi|323356561|ref|YP_004222957.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
 gi|323272932|dbj|BAJ73077.1| geranylgeranyl pyrophosphate synthase [Microbacterium testaceum
           StLB037]
          Length = 363

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 105/263 (39%), Gaps = 41/263 (15%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P  ++  S+R+D  L D L   +S       + +  A   +L GGK++R+          
Sbjct: 5   PEPIEAVSQRLDKFLSDQLSYASSLGP--EAETMSRAGAASLRGGKRLRARFCLTGWRAV 62

Query: 66  NVN--------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------- 110
             +           A+ V AA+E     +L+HDD+  +DN   RRG+P  H         
Sbjct: 63  AESTAARTVAPAAAAISVAAALEIFQAAALVHDDI--IDNSDTRRGQPAAHRALEAAHAA 120

Query: 111 ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                    +    A++ G+ L+ ++ +++            ++ + +            
Sbjct: 121 AHWAGDAAMFGRSGAVLLGDLLVAWSDDLLEDALADQPTASATRRLYAHMRRDVTI---- 176

Query: 162 GQMLDIQDE-----FIDETQVFMIQKMKTGALMCFA----CESGAIMAHASQNEKERLRC 212
           GQ LD+ +E     + D+       ++ +     ++     E GA +A A  ++ + L  
Sbjct: 177 GQFLDVAEESAYAVYPDDQHAERALRVASYKSARYSIQKPLEIGAALAGADDDQLDALAR 236

Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
           FG ++G+ FQL DD+L    D  
Sbjct: 237 FGHDVGMAFQLRDDVLGVFGDTA 259


>gi|315186189|gb|EFU19951.1| Polyprenyl synthetase [Spirochaeta thermophila DSM 6578]
          Length = 357

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 26/209 (12%)

Query: 50  GKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  LV   A +          RVGAA+E      L+HDD+  MD   +RRG P++ 
Sbjct: 54  GKLVRGALVWAGARVCGGAPEEWCARVGAALELFQSGLLVHDDV--MDRDRVRRGGPSMF 111

Query: 109 IQY---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            QY                E  A+  G+      F +++         +R  L+  +   
Sbjct: 112 AQYEGRADEEGVREARRVGEALAVCVGDVAFFLGFGLLA--GVGRGAAMRDALLRCVAEE 169

Query: 154 IGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERL 210
               G+     +        +    V  + + KTG          GA++A A +  +  L
Sbjct: 170 YARVGVAQMDDVWYGATGGGVSLDDVLRVYRYKTGRYTFSVPLSLGALLAGADEGVRGAL 229

Query: 211 RCFGENLGIIFQLADDLLDC---EEDLPK 236
              GE LG++FQ+ DD L     EE++ K
Sbjct: 230 EEVGELLGVVFQIRDDELGLFGSEEEIGK 258


>gi|46015925|pdb|1V4K|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima S77f Mutant
          Length = 299

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H   L+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLAFLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|49259555|pdb|1VG3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima A76yS77F
           MUTANT
          Length = 299

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H Y L+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLYFLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|183980313|ref|YP_001848604.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M]
 gi|183173639|gb|ACC38749.1| polyprenyl synthetase IdsB_3 [Mycobacterium marinum M]
          Length = 329

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
            +   A    AA+E IH ++L+HDD+  MD    RRG+ TV   +    AI+ G+ L   
Sbjct: 65  GDAREAAPAAAAVELIHNFTLLHDDV--MDGDSTRRGRATVWRVWGVNNAILLGDALHAL 122

Query: 127 AFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---IDETQVFMIQK 182
           A   ++ S    +  N  ++L  +         +  GQ  D   E    +       +  
Sbjct: 123 AIRTLTDSLGQGVAVNAITRLEQTC------LDLCVGQHQDCSFERCTTVTVPDYLRMAA 176

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT  LM  AC  GA+ A A       +  FG  LG+ FQ+ DDL+    D
Sbjct: 177 GKTAVLMACACALGAVSARADAATVAAVERFGYELGLAFQIVDDLIGIWGD 227


>gi|291441451|ref|ZP_06580841.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC
           14672]
 gi|291344346|gb|EFE71302.1| geranylgeranyl pyrophosphase synthase [Streptomyces ghanaensis ATCC
           14672]
          Length = 453

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 97/242 (40%), Gaps = 30/242 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV----NHLT 71
           +D +L D + +  +      +D      R+   GGK++R   V             +   
Sbjct: 63  LDHVLADRVARARAVDPLFGDDLAERVARFTRTGGKRVRPRFVWWTLRACGGGDGPSVAA 122

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVT 115
           ALR+GAA+E +   +L+HDD+  MD   +RR +P +H+                +     
Sbjct: 123 ALRIGAALELLQTCALVHDDV--MDGSTLRRARPALHVDVAAQYGGAAPSARAERLGGAA 180

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--- 172
           AI+AG+  L +A ++++      +     + + +         M+ GQ LD+  +     
Sbjct: 181 AILAGDLALAWADDLLAETPLAPRSARAVRRLWADMRT----EMVAGQYLDVHGQATGSR 236

Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              +      +K+    +      GA +A A    +E L   G   G+ FQL DDL D  
Sbjct: 237 SLPRALHAACLKSALYSVERPIALGAALADADDATREALGSAGRCAGLAFQLRDDLDDVF 296

Query: 232 ED 233
            D
Sbjct: 297 GD 298


>gi|68164585|gb|AAY87314.1| predicted geranylgeranyl diphosphate synthase [uncultured bacterium
           BAC17H8]
          Length = 341

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 11/206 (5%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
             M         +A+ +    GK +R+ +    A   NV+   AL   AAIE +H  SLI
Sbjct: 35  ERMPKIGEPLSEAALHHFASPGKMLRAKMALRAADHLNVDRYAALHWAAAIEVLHNASLI 94

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+   D   +RR +P V   Y    A+  G+ L+  +FE+ +    + +  +  +++ 
Sbjct: 95  HDDIC--DGDRLRRERPAVWSVYGRDVALTLGDWLVALSFELAAEAAQRAQTPMLVKILA 152

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNE 206
           +        G      +       D          KT  L+    E  A MA    S   
Sbjct: 153 THMKTT-TDGEAREFDVQ---PVRDWDHYLKGAGDKTAPLLTAPLEGVAAMALHGGSAPI 208

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
                     LG  +Q+A+D+L+   
Sbjct: 209 IGDCF---RALGNAYQIANDILNFSG 231


>gi|315504571|ref|YP_004083458.1| polyprenyl synthetase [Micromonospora sp. L5]
 gi|315411190|gb|ADU09307.1| Polyprenyl synthetase [Micromonospora sp. L5]
          Length = 360

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 30/245 (12%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRL--LSAIR-YALLGGKKIRSFLVTECAS-LFNVN 68
            +RID  L + L      +    +  L    AI  + L GGK++R             V+
Sbjct: 16  RQRIDKALTEFLAGQRGWLTAVDDGLLPVAEAIEAFVLGGGKRLRPAFGYWGYRGAGGVD 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------D 112
               +   AA+E +   +LIHDDL  MD    RRG+P +H ++                 
Sbjct: 76  SDQVVATLAALEFVQASALIHDDL--MDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFG 133

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           +  AI+ G+  L ++ E++ S         R++ +              GQ LD+  +  
Sbjct: 134 DAAAILLGDLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTV----GQYLDVLTQAT 189

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQ----NEKERLRCFGENLGIIFQLADDLL 228
            +T +    K+       +  E   ++  A              +G  LG  FQL DD+L
Sbjct: 190 GDTSLDRAAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDVL 249

Query: 229 DCEED 233
               D
Sbjct: 250 GVFGD 254


>gi|296171238|ref|ZP_06852642.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894206|gb|EFG73963.1| polyprenyl synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 429

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 80/207 (38%), Gaps = 21/207 (10%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           + Y + GGK +RS  V             ALR  A+ E +H ++L+ DD+  MD    RR
Sbjct: 120 MSY-VSGGKCLRSTFVYLGWLCGAAPGEAALRAAASFELLHVFALLQDDV--MDGSAERR 176

Query: 103 GKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           G+P+ H                 ++ E  AI+ G+  L ++ +++           R+  
Sbjct: 177 GRPSAHLRFARWHRERGLSGSSRRFGESAAILLGDLCLIWSEQMLRESGVDSTRLHRAWP 236

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQN 205
                      G       D++ +      V  + + K+G   +    E GA M+     
Sbjct: 237 RYDTMRTELAVGQFADLTSDVR-QMPSLEAVLDVARRKSGNYTVRRPLEIGAAMSDCDDR 295

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
              +L  +G  +G  FQL DD+L    
Sbjct: 296 TLTQLGRYGAAVGEAFQLRDDVLGVFG 322


>gi|255583629|ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
 gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
          Length = 308

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 85/206 (41%), Gaps = 10/206 (4%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKK-IRSFLVTECASLFNVNHLTALRVGAAIE 80
           D+       +  +    +   + +      +     L      L   +   AL   +A+ 
Sbjct: 55  DIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAACELVGGSRDQALAAASALR 114

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +   +  H+++P  D       +P  H  +     ++ G+G++ +AFE+++      +D
Sbjct: 115 LMIAAAFTHENIPLTDRPRP-SARPMFHHTFGPNIELLTGDGMIPFAFELLAQLNNPAQD 173

Query: 141 N--IRSQLMLSLTHNIGLQGMLGGQMLDIQ------DEFIDETQVFMIQKMKTGALMCFA 192
           N     ++M+ ++  +G QGM+ GQ  + Q      DE      +  + K K GA    A
Sbjct: 174 NSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWLRDVCKKKEGASHACA 233

Query: 193 CESGAIMAHASQNEKERLRCFGENLG 218
              GAI+   ++ E E+LR +G  +G
Sbjct: 234 GACGAILGGGNEEEIEKLRRYGLYVG 259


>gi|67527046|gb|AAY68315.1| putative geranylgeranyl pyrophosphate synthetase [uncultured marine
           bacterium 66A03]
          Length = 338

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 9/200 (4%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           S + +  +    +A  +    GK++R+ +       F  +    L   +A+E +H  SLI
Sbjct: 34  SILPSNKHPLSAAATHHFSSKGKQLRAKIALSAGEKFGADDAACLHWASAVELLHNASLI 93

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+   D   IRR   +V  +Y    A+  G+ ++  AF+  +              + 
Sbjct: 94  HDDIC--DGDTIRRNNASVWAKYGRDIALALGDWMIAEAFQQAAKAAHVSNSFNLVTKLS 151

Query: 149 SLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +   +      + GQ L+  +  + D  +   I   KT  L   A E  A +A  S    
Sbjct: 152 NHVKST-----IAGQALEFDNALYPDIDKYLEISAGKTAPLFVAAIEGIAEIAGRS-ELI 205

Query: 208 ERLRCFGENLGIIFQLADDL 227
           E +  +   +GI +Q A+D+
Sbjct: 206 EEINHYFVTMGICYQFANDI 225


>gi|321473148|gb|EFX84116.1| hypothetical protein DAPPUDRAFT_47316 [Daphnia pulex]
          Length = 302

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 17/204 (8%)

Query: 35  HNDRLLSAIRYALLG-GKKIRSFLVTECASLFN--------VNHLTALRVGAAIECIHCY 85
           H + +L    Y   G GK +R  ++   A   N               +V    E +H  
Sbjct: 2   HVESVLPLASYHFDGDGKCLRPLVILCWAKAINFILKETSPKVIENQKKVAQVAEMVHGT 61

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
            L HDD+  +D+   RR KPT++    +  +I AG+ +L  A E IS         + ++
Sbjct: 62  CLYHDDV--IDDAIKRRAKPTINFLCGQKKSIWAGDFVLGRALETISQISNNKVCILLTR 119

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++ ++     +Q   G    +   ++ID+T        KT ++  + C++  ++A A   
Sbjct: 120 MIQNVVTGELMQLDAGATEEERFSQYIDKT------FKKTASVFAYPCQAVLVLAGADAT 173

Query: 206 EKERLRCFGENLGIIFQLADDLLD 229
            +     FG  LGI +QL D + D
Sbjct: 174 LQTTAFEFGRQLGIAYQLVDGITD 197


>gi|224135433|ref|XP_002322072.1| predicted protein [Populus trichocarpa]
 gi|222869068|gb|EEF06199.1| predicted protein [Populus trichocarpa]
          Length = 236

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 14/211 (6%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKI-RSFLVTECASLFNVNHL 70
               ++  +D  L Q    +  +    +   + +      +     L      L   N  
Sbjct: 2   YWTSVNDEIDAHLKQA---IPIRPPLSVFEPMHHLTFAAPRTTAPALCIAACELVGGNRD 58

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+   +A+  +H  +L H+ + S  N      +  +   +     ++ G+G++ +  E+
Sbjct: 59  QAMAAASALRLMHAAALTHEHILSTGN------RARIGHSFGSNIELLTGDGMVPFGLEL 112

Query: 131 ISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           ++      ++N     ++++ +T  +G QGM  GQ    Q    D   +  + K K G L
Sbjct: 113 LAKSDDLTQNNSERILRVIIEITQAMGSQGMALGQYNQFQHGQSD--YIDHVCKKKEGEL 170

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGI 219
              A   GAI+   ++ E E+LR +G  +G+
Sbjct: 171 HSCAGAVGAILGGGTEEEIEKLRRYGLYVGL 201


>gi|302868959|ref|YP_003837596.1| polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302571818|gb|ADL48020.1| Polyprenyl synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 360

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 30/245 (12%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRL--LSAIR-YALLGGKKIRSFLVTECAS-LFNVN 68
            +RID  L + L      +    +  L    AI  + L GGK++R             V+
Sbjct: 16  RQRIDKALTEFLAGQRGWLTAVDDGLLPVAEAIEAFVLGGGKRLRPAFGYWGYRGAGGVD 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------D 112
               +   AA+E +   +LIHDDL  MD    RRG+P +H ++                 
Sbjct: 76  SDQVVATLAALEFVQASALIHDDL--MDRSDTRRGEPAMHRRFAARHRTAGWGGDADSFG 133

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           +  AI+ G+  L ++ E++ S         R++ +              GQ LD+  +  
Sbjct: 134 DAAAILLGDLCLVWSDELLHSSGLPPATVARARPVFDEMRTEVTV----GQYLDVLTQAT 189

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQ----NEKERLRCFGENLGIIFQLADDLL 228
            +T +    K+       +  E   ++  A              +G  LG  FQL DD+L
Sbjct: 190 GDTSLDRAAKVARYKSAKYTVERPLLLGAALAGAPPEVHAAYSAYGLPLGEAFQLRDDVL 249

Query: 229 DCEED 233
               D
Sbjct: 250 GVFGD 254


>gi|307719391|ref|YP_003874923.1| polyprenyl synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533116|gb|ADN02650.1| putative polyprenyl synthetase [Spirochaeta thermophila DSM 6192]
          Length = 376

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 26/209 (12%)

Query: 50  GKKIRSFLVTECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  LV   A +          RVGAA+E      L+HDD+  MD   +RRG P++ 
Sbjct: 73  GKLVRGALVWAGAGVCGGAPEEWCARVGAALELFQSGLLVHDDV--MDRDRVRRGGPSMF 130

Query: 109 IQY---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            QY                E  A+  G+      F +++       + +R  L+  +   
Sbjct: 131 AQYEGRAGEEGVREARRVGEALAVCVGDVAFFLGFGLLA--GVGRGEAMRDALLRCVAEE 188

Query: 154 IGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERL 210
               G+     +      E +    V  + + KTG          GA++A A +  +  L
Sbjct: 189 YARVGVAQMDDVWYGAAGEGVRLEDVLRVYRYKTGRYTFSVPLSLGALLAGADEGVRGAL 248

Query: 211 RCFGENLGIIFQLADDLLDC---EEDLPK 236
              GE LG++FQ+ DD L     EE++ K
Sbjct: 249 EEVGELLGVVFQIRDDELGLFGSEEEIGK 277


>gi|81997099|sp|Q8V9T7|TPRT_ASFM2 RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
 gi|16905412|gb|AAL31326.1|L00966_9 polyprenyl synthetase [African swine fever virus]
          Length = 318

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 36/244 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAIE------DGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H             A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  +  
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPE-- 215

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                       KT      A   G ++   +  +   +       G  FQLADD+ D +
Sbjct: 216 ------------KTIPFFKIAFIMGWVLGTGTIEDIGVIERAAHCFGNAFQLADDIKDHD 263

Query: 232 EDLP 235
            D  
Sbjct: 264 TDTG 267


>gi|1549220|dbj|BAA13462.1| geranylgeranyl diphosphate synthetase [Thermus thermophilus]
          Length = 344

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 81/225 (36%), Gaps = 17/225 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I   L + L+    H    + D L     Y   GGK +R  L    A          L
Sbjct: 6   ETIRQALQERLIARLDHTDPLYRDLLQD---YPRRGGKMLRGLLTVYSALAHGAPLEAGL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               A+E    + L+HDD+   D    RRG+P +H  +    A+ AG+ +    + +++ 
Sbjct: 63  ETATALELFQNWVLVHDDIE--DGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAE 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-----FIDETQVFMIQKMKT-GA 187
               L   +    +L   H + ++    GQ LD+         +     F +   K    
Sbjct: 121 ---GLARGLFPPEVLLEFHEV-VRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAVYY 176

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   G ++   +          G  LG  FQ+ DD+L+ E 
Sbjct: 177 TAVVPLRLGVLLVGKTP--PAAYEEGGLRLGTAFQIVDDVLNLEG 219


>gi|302557478|ref|ZP_07309820.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
 gi|302475096|gb|EFL38189.1| polyprenyl synthetase [Streptomyces griseoflavus Tu4000]
          Length = 360

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 92/248 (37%), Gaps = 34/248 (13%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND---RLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
             ID  + D   +  +   +   D    +     Y L GGK++R             +  
Sbjct: 11  AAIDAAISDFFAERRAEAASLGEDFAATVGELENYVLRGGKRVRPTFAWLGWIGAGGDPD 70

Query: 71  T-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-------------- 111
                  LR  A  E +H   LIHDD+  +D    RRG P  H+ +              
Sbjct: 71  DPVAPAVLRACAGFELLHASGLIHDDI--IDASRTRRGHPAAHVVFAERHRMRRFSGDPG 128

Query: 112 --DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 AI+ G+  L ++  ++ +         R   + S      +     GQ+LD+  
Sbjct: 129 AFGAGAAILVGDLALVWSDVMVRASGLPADAQTRLGPVWSAVRYEVMY----GQLLDLIS 184

Query: 170 EFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +  DE  V    ++ + KT    +    + GA +A A     +  R FG ++GI FQL D
Sbjct: 185 QASDEEGVDAALLVDQYKTASYTVERPLQFGAAIAGADAGLVDAYRAFGADIGIAFQLRD 244

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 245 DLLGVFGD 252


>gi|1220524|gb|AAA91949.1| geranylgeranyl pyrophosphate synthase [Streptomyces griseus]
 gi|1632833|emb|CAA64849.1| GGPP synthase [Streptomyces griseus]
          Length = 425

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 89/237 (37%), Gaps = 27/237 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-NHLTALRVG 76
            +L D + +      +   +       + L GGK++R  L+              ALR+G
Sbjct: 51  AVLADRIDEAVRSDASFCEELARRVADFTLEGGKRMRPRLLWWGMRSCGAAETAAALRLG 110

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIAG 120
            A+E I   +LIHDD+  MD   +RRGKP +H                  +    A++AG
Sbjct: 111 VALELIQSCALIHDDV--MDRSRLRRGKPAMHIGLAERAGLSPDSERGSDFGASAAVLAG 168

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           +  L +A + ++          R   +           M+ GQ LD++ +    + V   
Sbjct: 169 DLALVWADDTVAETVLSAAQRRRIGALWRAMRT----EMVAGQYLDLRGQLSGGSSVAQA 224

Query: 181 QKMKTGALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +        ++ E    +  A         + LR  G   GI FQL DDLL    D
Sbjct: 225 LRTACLKSASYSVERPLAIGAALAGADDRTTDALRSAGRCAGIAFQLRDDLLGVFGD 281


>gi|71041841|pdb|1WKZ|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima K41a Mutant
 gi|71041842|pdb|1WKZ|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima K41a Mutant
          Length = 299

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +     Q   +  L  A+        ++R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPE-----QIMKDLPLYGAML-------RVR--LSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|297562409|ref|YP_003681383.1| polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846857|gb|ADH68877.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 350

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 21/238 (8%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
             R+D  L +   +    +     D L     +  AL GGK++R+               
Sbjct: 11  RTRVDAELREFARRETDRLVAIDADLLPVAEQLDVALTGGKRLRASFCYWGWRAAGQPDS 70

Query: 71  TAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-------------IQYDEVTA 116
            AL R  AA+E +H  +++HDDL  +D   IR G P+ H                    A
Sbjct: 71  DALVRAAAAMELVHAAAVVHDDL--IDESPIRHGVPSAHVALRAAFTGRPRPHAGSRALA 128

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L+++A E+            R++ +  +     + G     +          + 
Sbjct: 129 LLTGDLLMSWAAELFLCCGLPSAYLSRARELWLVMARELIAGECLEVLRTGSPPDTGRS- 187

Query: 177 VFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              + + KT    +      G  +A A     E    +G  LG  FQL DDLL    D
Sbjct: 188 -LQVIRYKTAKYTVEHPLRIGGALAGAPGAVMEAFTAYGLPLGEAFQLRDDLLGLFGD 244


>gi|222100092|ref|YP_002534660.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572482|gb|ACM23294.1| Polyprenyl synthetase [Thermotoga neapolitana DSM 4359]
          Length = 267

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 13/184 (7%)

Query: 50  GKKIRSFLVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +R  L         V     A+   AA+E +H  SL+HDD+  +D    RRGK T++
Sbjct: 8   GKMLRVRLSILSFRNKGVEIDEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETIN 65

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y +  A+ AG+ +L  AF+ +   +          ++  ++    ++ +        +
Sbjct: 66  SLYGDRAAVAAGDLVLVSAFQTVEELENDTLRRAFLNVIRKMSEGELIEQL-------KR 118

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              I + +   I + K+GAL   A +  A++   S  E   L   G  +G I+Q+ DD++
Sbjct: 119 YTPITKEEYLRIVEGKSGALFGLALQLPALLKGESGEE---LYKLGVTIGTIYQMLDDIM 175

Query: 229 DCEE 232
           D  E
Sbjct: 176 DFAE 179


>gi|10801552|dbj|BAB16689.1| GGPP synthase [Eucommia ulmoides]
          Length = 127

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 3/125 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H+ + E  A++AG+ LL +AFE+I++  T +  +   +++  L  +IG 
Sbjct: 1   NDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTGVPADRIVRVIGELAKSIGS 60

Query: 157 QGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + +     +  I   KT AL+  +   GAI+  A+  E E+LR F
Sbjct: 61  EGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGATDPEVEKLRKF 120

Query: 214 GENLG 218
              +G
Sbjct: 121 ARCIG 125


>gi|114049915|emb|CAK50932.1| putative polyprenyl synthetase [Streptomyces ambofaciens]
 gi|114050137|emb|CAK51170.1| putative polyprenyl synthetase [Streptomyces ambofaciens]
          Length = 362

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 100/253 (39%), Gaps = 27/253 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL-----LSAIRYALLGGKKIRSF 56
              +P +  + ++R +T  +    + A       + R            +L GGK++R  
Sbjct: 8   TPQIPERFADCARRFNTRFEQYFRELADSFDAPPSSRFTPECLDLLRDLSLRGGKRLRVA 67

Query: 57  LVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-- 113
           ++ E A L   + +  L      +E +  + L+HDD+  +D+G +RRG P+ +  Y E  
Sbjct: 68  MLYEAARLVTPDPVPGLEEAALGVELLQTHGLVHDDI--IDDGPVRRGGPSTYYAYREQF 125

Query: 114 --------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                     A++AG+  L  +  ++               +LS   +     M+ GQ+ 
Sbjct: 126 PDRPQDALGLAVLAGDLALVLSLRVLLDSPAPPSARHAMVGVLSAAASA----MIAGQIT 181

Query: 166 DIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER-LRCFGENLGII 220
           DI+ +F     E  +  +   KT    +    + G + A       +  LR +   +GI 
Sbjct: 182 DIERDFTHLPSEELLHAVSDYKTAHYSILAPVQLGLLAAGEDPARFDAELRRYARLVGIY 241

Query: 221 FQLADDLLDCEED 233
             + DD LD   D
Sbjct: 242 ETMRDDYLDLFGD 254


>gi|182412394|ref|YP_001817460.1| polyprenyl synthetase [Opitutus terrae PB90-1]
 gi|177839608|gb|ACB73860.1| Polyprenyl synthetase [Opitutus terrae PB90-1]
          Length = 306

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/224 (31%), Positives = 100/224 (44%), Gaps = 6/224 (2%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L     R+   LD  L  T +H +      L     +    GK +R+ LV   A     +
Sbjct: 6   LPALRARLLDALDRHLP-THAHAEPSLRAALRQLASH---PGKLVRAQLVLIGAEQHGWS 61

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A ++  AIE  H  SL+ DDLP MDN   RRG+P VH ++ + TAI+A   L+  A+
Sbjct: 62  AAAAEQLACAIEFFHVASLVLDDLPCMDNAETRRGQPCVHRRHGDATAILAALALINRAY 121

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--QVFMIQKMKTG 186
            +      +    +R   +  L   +G  G++GGQ  D+     D +   V  I   KTG
Sbjct: 122 ALAGEAFLRAPRTVRRAAVTCLHRALGHAGLVGGQAWDLAFARTDRSSRTVAKIAAAKTG 181

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           AL        A+ A AS  E+  LR      G+ FQ ADDL D 
Sbjct: 182 ALFELTVLLPALAAPASGVERRWLRALCVYWGLQFQAADDLRDV 225


>gi|283456281|ref|YP_003360845.1| polyprenyl synthase [Bifidobacterium dentium Bd1]
 gi|283102915|gb|ADB10021.1| idsA Polyprenyl synthase [Bifidobacterium dentium Bd1]
          Length = 359

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 26/251 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL---GGKKIRSFLVTEC 61
            + L++   RI  ++ D +   A          +  A+ R A+    GGK++R+ L  + 
Sbjct: 4   STDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLTLDS 63

Query: 62  ASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------ 109
             +F  +          L +  A+E     +L+HDD+  +D+  +RRG+P+ H       
Sbjct: 64  FRVFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRRGRPSAHRALASGT 121

Query: 110 ---QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                     I+ G+ L T + +I +    +L  +          H     G +    ++
Sbjct: 122 HSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAVE 181

Query: 167 IQDEFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIF 221
           +      E  V     + + KT         E G + A    +    L    G  LG+ F
Sbjct: 182 LNPLDDPEELVRASLNVFRWKTASYTTIAPLEFGMLAAGLDASAARDLAMSIGLPLGLAF 241

Query: 222 QLADDLLDCEE 232
           QLADDLLD   
Sbjct: 242 QLADDLLDVIG 252


>gi|219847821|ref|YP_002462254.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
 gi|219542080|gb|ACL23818.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
          Length = 361

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 8/149 (5%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+HDDL  +D    RRG+ TVH ++D   A++ G+     A   ++           ++
Sbjct: 120 SLVHDDL--VDQANRRRGQITVHARWDNDVALMVGDYFFALAAAEMARSPDPRIITFYAE 177

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
            + ++         +       +       Q       KT  L   AC++G +    S +
Sbjct: 178 AVQTICEGELSPVTVA------EPLDRALRQYLYKTGAKTAVLFEAACKAGMVSGGGSDD 231

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDL 234
           +   L  +G +LG+ FQ+ DD+LD   D 
Sbjct: 232 QILALGRYGYDLGMAFQIIDDVLDFIGDE 260


>gi|9628182|ref|NP_042768.1| prenyltransferase [African swine fever virus]
 gi|82051504|sp|Q65164|TPRT_ASFB7 RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
 gi|780444|gb|AAA65304.1| prenyltransferase [African swine fever virus]
 gi|162849284|emb|CAN10174.1| Prenyltransferase [African swine fever virus Benin 97/1]
 gi|162849457|emb|CAN10424.1| Prenyltransferase [African swine fever virus OURT 88/3]
 gi|291289519|emb|CBH29176.1| BA71V-B318L [African swine fever virus E75]
 gi|1097465|prf||2113434CC prenyltransferase
          Length = 318

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 92/244 (37%), Gaps = 36/244 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  SK  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSKEFETILNNAIE------DGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H             A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  +  
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPE-- 215

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                       KT      A   G ++   +  +   +       G  FQLADD+ D +
Sbjct: 216 ------------KTIPFFKIAFIMGWVLGTGTIEDIGMIERAAHCFGHAFQLADDIKDHD 263

Query: 232 EDLP 235
            D  
Sbjct: 264 TDTG 267


>gi|313127585|ref|YP_004037855.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM
           11551]
 gi|312293950|gb|ADQ68410.1| farnesyl-diphosphate synthase [Halogeometricum borinquense DSM
           11551]
          Length = 280

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 15/223 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  +R  +++DD L      +     +        AL GGK++R  +          +  
Sbjct: 2   EYLERRVSMVDDRLEAVIDAVDP--PELSDELAHVALAGGKRVRPAVTILSCEACGGDAD 59

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A+    AIE +H  SL+      +D   IRRG P+   +Y    +IIA +GLL  AF +
Sbjct: 60  AAVDFAVAIELVHNASLV--IDDIIDRSDIRRGTPSAWAEYGYGPSIIASDGLLGEAFAL 117

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           +S                       +  +  G+  ++     +E +   + + KTGAL  
Sbjct: 118 LS-----------VDDHAMQIVAESMVELGEGEATELVARPTNEAEYMELARRKTGALFR 166

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A E GA+ A A     E    + E +G+ FQ+ DD+LD   D
Sbjct: 167 AAAELGAVAADADPFTVEAFGEYAERVGVAFQIRDDVLDATAD 209


>gi|325067554|ref|ZP_08126227.1| Polyprenyl synthetase [Actinomyces oris K20]
          Length = 291

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
            G A+E  H  +L HDD+  MD   +RRG P+    +    AI+ G+ L+  A +++++ 
Sbjct: 1   AGVAVELTHIATLYHDDV--MDEAPLRRGAPSAQTVWGNSAAILTGDVLVARASQLMAAL 58

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCF 191
             +            + H    + +  GQ+ +                +   KTG+L+  
Sbjct: 59  GPEAV----------MAHAKTFERLCMGQLHETLPRPAGTDPVDHYIQVLADKTGSLIAV 108

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   GA++  A  + ++ +  FGE +G+ FQLADD++D   D  
Sbjct: 109 SARYGAMLTGAGTHTEQIVEEFGERIGVAFQLADDVIDLMSDSA 152


>gi|229891678|sp|P0C9E1|TPRT_ASFWA RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
          Length = 318

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 92/244 (37%), Gaps = 36/244 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAIE------DGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H             A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  +  
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPE-- 215

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                       KT      A   G ++   S  +   +       G  FQLADD+ D +
Sbjct: 216 ------------KTIPFFKIAFIMGWVLGTGSVEDIGMIERAAHCFGNAFQLADDIKDHD 263

Query: 232 EDLP 235
            D  
Sbjct: 264 TDTG 267


>gi|158301264|ref|XP_320978.4| AGAP002069-PA [Anopheles gambiae str. PEST]
 gi|157012386|gb|EAA01051.4| AGAP002069-PA [Anopheles gambiae str. PEST]
          Length = 249

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 8/153 (5%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SL+HDD+  +D  + RRGKP+V++ +++     AG+ +L     +++  +    
Sbjct: 4   EMIHTASLVHDDV--IDQSFARRGKPSVNVLWNQQQVAQAGDYILAVVSMMLARLQHNDV 61

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             I S+++  L     +      Q+   + E       F     KT +L+  + ++ A++
Sbjct: 62  TLILSEILADLVQGELM------QLDTKETENERFAHYFARSYRKTASLIANSLKAVAVL 115

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               +   E    +G NLG+ FQL DDLLD   
Sbjct: 116 TGVGERTAEISFQYGRNLGLAFQLVDDLLDFVS 148


>gi|289806419|ref|ZP_06537048.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 153

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/157 (38%), Positives = 87/157 (55%), Gaps = 7/157 (4%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECA 62
               +LQ    + +  L   +           N  ++ A++Y ALLGGK++R FLV    
Sbjct: 2   DFTQQLQACVTQANQALSRFIAPL-----PFQNTPVVEAMQYGALLGGKRLRPFLVYATG 56

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +F V+  T     AA+ECIH YSLIHDDLP+MD+  +RRG PT HI++ E  AI+AG+ 
Sbjct: 57  QMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDA 116

Query: 123 LLTYAFEIISS-PKTQLKDNIRSQLMLSLTHNIGLQG 158
           L T AF IIS  P  ++ D  R  ++  L +  G+ G
Sbjct: 117 LQTLAFTIISDAPMPEVADRDRIAMIAELANASGIAG 153


>gi|330835268|ref|YP_004409996.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4]
 gi|329567407|gb|AEB95512.1| polyprenyl synthetase [Metallosphaera cuprina Ar-4]
          Length = 282

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 85/226 (37%), Gaps = 20/226 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L E   R   I+D+L+ +     +      ++   +Y +  GK+ R  L+          
Sbjct: 3   LMEFWFRSRVIIDELVEKFLKETREWE---VMEMSKYIMRDGKRFRGTLMFLFNGALGGE 59

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A     A E +H  SL  DD+  +D   +RRG       Y     I   N L+  A 
Sbjct: 60  EKNAYPGALATEILHSASLALDDI--VDYDELRRGMKAAWAVYTNRKVIFVSNYLIPTAL 117

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            IIS    +    ++  + L     +G           ++D +  +       ++KT +L
Sbjct: 118 NIISGYGEK---ALKISVDLWKDTAVGA----------LKDMYGKDDDYVRTVELKTASL 164

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD-CEED 233
                   A  +       + L   G+NLGII+Q+ DD +D   +D
Sbjct: 165 FKLPAML-ASFSSGKIELLDTLMEIGKNLGIIYQIVDDYVDCVTQD 209


>gi|218887577|ref|YP_002436898.1| polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758531|gb|ACL09430.1| Polyprenyl synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 331

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 11/172 (6%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +      +  ++E +H  +L+HDD+  +D   +RRG P  H  + +   ++AG+ LL  A
Sbjct: 69  SGPDLYPLACSVELLHSATLLHDDI--LDGADLRRGLPAAHTMFGQTETVLAGDALLALA 126

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
             I++           ++ ++       ++           D +ID      I   KT  
Sbjct: 127 NRIVARYGDARLTETIAEAIVQTATGEIVEIAHQRSTDHGHDTYID------IITGKTAW 180

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           ++  +CE GA+ A A     +    FG NLGI FQ+ DD LD      D  K
Sbjct: 181 MLRASCELGALAAQAPDEAVQAAAGFGLNLGIAFQIVDDALDFAASSKDTGK 232


>gi|262153570|ref|ZP_06028698.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae INDRE 91/1]
 gi|262030597|gb|EEY49233.1| octaprenyl-diphosphate
           synthase/dimethylallyltransferase/geranyltranstransferas
           e/geranylgeranyl pyrophosphate synthetase [Vibrio
           cholerae INDRE 91/1]
          Length = 232

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 6/134 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGK T +  +    +++ G+ + T +F++++   +     ++   ++S   N+  +G 
Sbjct: 1   MRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGS-----MKILKLMSDAVNVIAEGE 55

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           +  Q+++  D    E     +   KT  L   A + GAI+  AS   +  ++ +G+ LG 
Sbjct: 56  V-QQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGT 114

Query: 220 IFQLADDLLDCEED 233
            FQL DD++D   D
Sbjct: 115 AFQLIDDVMDYTSD 128


>gi|93278762|pdb|2AZL|A Chain A, Crystal Structure For The Mutant F117e Of Thermotoga
           Maritima Octaprenyl Pyrophosphate Synthase
          Length = 299

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A   +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AEHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|134101792|ref|YP_001107453.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914415|emb|CAM04528.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 249

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 11/155 (7%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H +SL+HDD+  MD    RR +PTV   +    AI+AG+ +L  A  I+S+  ++    
Sbjct: 1   MHNFSLLHDDV--MDGDLTRRHRPTVWSLFGTSNAILAGDAILGLAPRILSATGSE---- 54

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFID--ETQVFMIQKMKTGALMCFACESGAI 198
               L         +  +  GQ  DI   E +D        + + KTG L+  +C  G +
Sbjct: 55  --HALTAIDWFGKCVVKLCEGQAADISFSERVDVGIDACVAMARAKTGELLGTSCALGGL 112

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A A + +   LR FG  +G+ FQL DDLL    D
Sbjct: 113 FAGADRTQITALREFGSEIGLAFQLVDDLLGIWGD 147


>gi|122890375|emb|CAL34101.1| putative trans-polyprenyl diphosphate synthetase [Streptomyces
           cinnamonensis]
          Length = 352

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 40/252 (15%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL----LGGKKIRSFLVTECASLF 65
           +E  ++++  L   L +    +  + N+R + A+         GGK+IR           
Sbjct: 19  EELLEQMEDRLRAFL-RAEHELWAEVNERAVGAVAALTDLVAAGGKRIRPAFCIAGYLAA 77

Query: 66  NVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------------ 111
             +      +   AA+E +H  +LIHDD+  +D    RRG+PTVH ++            
Sbjct: 78  GGDPDDTAVVAAAAALEMLHASALIHDDV--IDASSHRRGRPTVHARHSALHDRNAWQGE 135

Query: 112 ----DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
                E  AI+ G+  L Y+ +++++    +                    ++ GQ +D+
Sbjct: 136 SRRYGEGVAILVGDLALVYSEQLMAAAPPAVLP----------VWGTLRSELMIGQYMDM 185

Query: 168 --QDEFIDETQVFMIQKM-KTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               EF+ + ++     + K+G   +      GA  A    +       +GE +G  FQL
Sbjct: 186 TAAAEFLVDPRLSRWIALAKSGHYTIHRPLVVGASAAG-RADLAPAFAKYGEAVGEAFQL 244

Query: 224 ADDLLDCEEDLP 235
            DDLLD   D  
Sbjct: 245 RDDLLDAFGDFA 256


>gi|225351338|ref|ZP_03742361.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157682|gb|EEG70965.1| hypothetical protein BIFPSEUDO_02931 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 364

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 26/251 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVTEC 61
            S L++   RI +++ D     A          +   +      +  GGK++RS L  + 
Sbjct: 4   SSDLEQIESRIVSLVKDFAFLHADDSVASSCRPIADMVAKQAVTSSEGGKRLRSLLTLDS 63

Query: 62  ASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
              F        +    L +  A+E     +L+HDD+  +D+  +RRGKP+ H  +   T
Sbjct: 64  FRAFASEDVRERDFDALLDLACAVEVFQTGALVHDDI--IDDSDLRRGKPSAHRAFSTGT 121

Query: 116 AIIA-GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG----GQMLD---I 167
              A G+GL     +++++    + D   S+L         L  M      GQ+LD    
Sbjct: 122 HSEAIGHGLGIMLGDMLATASVDIADKAASKLTHGSDVVAALLNMHREVEVGQVLDLAVE 181

Query: 168 QDEFIDETQV----FMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIF 221
            +   D  ++      + + KT         E G + A     + +++    G  LG+ F
Sbjct: 182 LNPLDDPDELVEASLNVFRWKTASYTTIAPLEFGMLAAGIGKDDARKQALAVGLPLGLAF 241

Query: 222 QLADDLLDCEE 232
           QLADDLLD   
Sbjct: 242 QLADDLLDVVG 252


>gi|210134440|ref|YP_002300879.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12]
 gi|210132408|gb|ACJ07399.1| octaprenyl-diphosphate synthase [Helicobacter pylori P12]
          Length = 307

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 23/194 (11%)

Query: 51  KKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L +          A  + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 36  KMLRSKLMLA---LLDEKTDAILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 90

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +     S  +L L+        +G    
Sbjct: 91  SINALFGNFNAVMLGDVFYSKAFFELSKMGESIA-KALSNAVLRLSRGEIEDVFVG---- 145

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +    D+ + + I + KT   M  + +S AI+ +    + +    FG N G+ FQ+ D
Sbjct: 146 --ESFNSDKQKYWRILEDKTAHFMEASLKSMAILLN---KDAKMYADFGLNFGMEFQIID 200

Query: 226 DLLDCEED---LPK 236
           DLLD  +D   L K
Sbjct: 201 DLLDITQDANTLGK 214


>gi|167391930|ref|XP_001739954.1| geranylgeranyl pyrophosphate synthetase [Entamoeba dispar SAW760]
 gi|165896168|gb|EDR23665.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba dispar
           SAW760]
          Length = 349

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 91/253 (35%), Gaps = 44/253 (17%)

Query: 9   LQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +++    ++  L ++  +     +        +  +   ++G GK++R   +        
Sbjct: 1   MEQLVSLVEDKLKEVFEEERKRNVCHPFQGECVDVMEKFVMGPGKRLRPLSLLLFFIGGG 60

Query: 67  V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV---------------- 107
                    +R   A+E +H  +L HDD+  MD   +RR  PTV                
Sbjct: 61  GKIEERKGVIRTACAMELLHDSTLAHDDI--MDEDELRRNAPTVVKTFYDKYVERNKEDV 118

Query: 108 ----------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                        Y    AI+ GN L + A  +     + + + +               
Sbjct: 119 KTEKFLFISRGTTYASSIAIMVGNILYSMAQRLCLESGSNIAEMLLELF----------D 168

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            +  GQ+LD+      E     +  MKT          G  +A  S+++ E  + +GE+ 
Sbjct: 169 VLNYGQILDMSCLSTVEDYKLNVI-MKTAIFFKTTACIGLTLAGRSEHDIEIGKEWGEHF 227

Query: 218 GIIFQLADDLLDC 230
           GI FQ+ DDLLD 
Sbjct: 228 GIAFQMRDDLLDI 240


>gi|90415703|ref|ZP_01223637.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [marine gamma proteobacterium HTCC2207]
 gi|90333026|gb|EAS48196.1| bifunctional short chain isoprenyl diphosphate synthase (idsA)
           [marine gamma proteobacterium HTCC2207]
          Length = 339

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 87/221 (39%), Gaps = 21/221 (9%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           L +L L     M    +  L  A RY     GK  R+ L         +N    L   AA
Sbjct: 20  LAELELLYKREMPDAQST-LAPAARYHFKNPGKSFRAQLALTSGVSLGLNTQDNLHWAAA 78

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E +H  SLIHDD+   D    RRG+ ++H  +    A+  G+ ++  AFE+ +      
Sbjct: 79  CELLHNASLIHDDIS--DASTHRRGQESIHQHFGADMALCLGDWMVAKAFELGAR----- 131

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMIQKMKTGALMCFACESGA 197
             N      L       +Q    GQ+ DI Q E  +      I K KT  L+    +  A
Sbjct: 132 --NALYGGKLVTLLAQAMQETCSGQISDITQRECANLDDWQRIAKGKTAPLLIAPIKGAA 189

Query: 198 IMAHASQNEKERL--------RCFGENLGIIFQLADDLLDC 230
           I A  +  + E+L        +  G   G+ +Q  +D+ D 
Sbjct: 190 IAAGLNAEQNEKLNAELQSLEKLVGYC-GLAYQGRNDIDDI 229


>gi|170290692|ref|YP_001737508.1| polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174772|gb|ACB07825.1| Polyprenyl synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 352

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 99/258 (38%), Gaps = 30/258 (11%)

Query: 4   GLPSKLQENSKRIDTILDDLLL--------------QTASHMQTQHNDRLLSAIRYAL-L 48
            +  +L+E  + +D +++                  ++  +        +   +   L  
Sbjct: 2   EIERELKEAREWLDALMEKYFPRRINEEYLEWLMGKKSRGYDAITVEKAIFEPMWDLLSR 61

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+ R +L    +    V+      +   IE +H  SLI DD+   D   +RRG   +H
Sbjct: 62  GGKRWRPWLFLVLSRNLGVDLERYKELALIIELLHNGSLIADDIE--DGAEVRRGDKAIH 119

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           I+Y    A+   + +      I+           R    L   +   +  +  GQ  DI 
Sbjct: 120 IKYGLDIAVNLSSAMYFLPLRILMEMNVDELKYRR----LVNAYLEDMIRIHIGQATDIG 175

Query: 169 D-------EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                   E +       +   KTG L   A    AI A  S+ E+ R+  F E++G+ F
Sbjct: 176 WHRGLRDPETVGVEHYLEMCANKTGVLPRMAARFAAIAADLSEEEERRIGKFAESIGVAF 235

Query: 222 QLADDLLDC--EEDLPKK 237
           Q+ DD+L+    E+L K+
Sbjct: 236 QIQDDILNLRSAENLGKE 253


>gi|145222438|ref|YP_001133116.1| polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315442885|ref|YP_004075764.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
 gi|145214924|gb|ABP44328.1| Polyprenyl synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315261188|gb|ADT97929.1| geranylgeranyl pyrophosphate synthase [Mycobacterium sp. Spyr1]
          Length = 371

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 87/238 (36%), Gaps = 21/238 (8%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLT 71
             R+   + + +    +         +    +R  L  GK +RS  +             
Sbjct: 30  RDRVLAAITEFVDARCADALAGGPVDVAEDVLRGLLADGKCLRSTFLYVGWRCGADGTDA 89

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVT 115
           A+R  A++E +H ++L+ DD+  MD   +RRG+PT H                 ++ E  
Sbjct: 90  AIRAAASLEFLHAFALMQDDV--MDESPMRRGRPTAHRAFANWHHANGLSGSSTRFGESA 147

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A++  +  L +A +++           R+             G     + D    F    
Sbjct: 148 AVLLADLCLVWAEQMLRESGVDAAALDRAWPRYDTMRTELAVGQFADLVNDT-ATFPSLD 206

Query: 176 QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            V  + + K+G   +    E GA +A   + +   L  +G  +G  FQ+ DDLL    
Sbjct: 207 AVLDVARRKSGNYTVRRPLEIGATLAGCDERQLSALAGYGSAVGEAFQMRDDLLGVFG 264


>gi|297563839|ref|YP_003682812.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848288|gb|ADH70306.1| Polyprenyl synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 768

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 19/208 (9%)

Query: 39  LLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+  +R+   G G+  RS++      LF V+      + AA E +H  SLI DD+   D 
Sbjct: 451 LVGPVRHTTAGLGRSWRSYVSMAAIELFGVDSEPYRPLVAAAELLHTGSLIVDDVE--DR 508

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG+P  H+ + E  A+ AG       F +       L D+   +L +   +   L+
Sbjct: 509 SPLRRGRPAAHVVFGEAVAVNAGTAAY---FALDRVLNRVLPDDAALRLRVYQVYLRVLR 565

Query: 158 GMLGGQMLDIQD---------EFIDETQVFMI----QKMKTGALMCFACESGAIMAHASQ 204
              GGQ +DI           E  D   +         +KT A +    E GA++A A +
Sbjct: 566 AGHGGQAIDIAGHRAAMDEAVETGDAEALLRRVRSGHWLKTAAPVRGLAEIGALVAGARE 625

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   L  + + +G+ +Q++DD++D   
Sbjct: 626 EQFRALGEYFDAVGLAYQISDDVMDLRG 653


>gi|229891677|sp|P0C9E0|TPRT_ASFP4 RecName: Full=Trans-prenyltransferase; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Polyprenyl-diphosphate synthase
          Length = 318

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 36/244 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAIE------DGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H             A+E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAVEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  +  
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPE-- 215

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                       KT      A   G ++   +  +   +       G  FQLADD+ D +
Sbjct: 216 ------------KTIPFFKIAFIMGWVLGTGTIEDIGMIERAAHCFGNAFQLADDIKDHD 263

Query: 232 EDLP 235
            D  
Sbjct: 264 TDTG 267


>gi|289178875|gb|ADC86121.1| Dimethylallyltransferase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 376

 Score =  121 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 95/259 (36%), Gaps = 38/259 (14%)

Query: 6   PSKLQENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTE 60
            S +     RI  ++ D +    T + +         + +  AL    GGK++R+ L  +
Sbjct: 14  SSSIGAIETRIRELVHDYVGVNGTDAPITPALRPMFHTVVDQALASSEGGKRLRALLTLD 73

Query: 61  CASLFNVNHL---------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ- 110
              +                 L    AIE     +L+HDDL  +D+  +RRGKP+ H   
Sbjct: 74  AYDVLAGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDL--IDDSDLRRGKPSAHCAL 131

Query: 111 --------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                         ++ G+ L T    I+    T + ++ R    L          +  G
Sbjct: 132 TSFAGARSIGRGLGLMLGDMLATACTLIMEDASTGMVEHRR----LVEAFLSMQHDVEVG 187

Query: 163 QMLDIQDEFIDETQ-------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--F 213
           Q+LD+  E +              + + KT +    A    A +A    +E   L C   
Sbjct: 188 QVLDLAIERMPLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASGMTSEAANLHCHAI 247

Query: 214 GENLGIIFQLADDLLDCEE 232
           G  LG  FQLADDLLD   
Sbjct: 248 GLPLGQAFQLADDLLDVTG 266


>gi|257067655|ref|YP_003153910.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
 gi|256558473|gb|ACU84320.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
          Length = 382

 Score =  121 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 91/247 (36%), Gaps = 26/247 (10%)

Query: 12  NSKRIDTILDDLLLQTAS---HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV- 67
               +D  +  LL + ++    +    +  L  A   A  GGK+ R  L+      F   
Sbjct: 5   QRTAVDREIQRLLGRGSTLPGALPALAHGDLWQAFARATEGGKRARPVLLLAAHEAFGGG 64

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH-----------------IQ 110
            H  A++VGAA+E +H   +I DD+  +D    RRG P +                   +
Sbjct: 65  RHEAAVQVGAALELLHTSFVIQDDV--IDGDETRRGAPNLPGSVAAEAREQGASPAGSRR 122

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQ 168
                 I+AG+  L  A   ++          R   +   T +    G L    L     
Sbjct: 123 LGVAAGILAGDLGLVAALRAVARCDAPGPVVDRLLDLFESTLHTSAAGELADVRLQLTPA 182

Query: 169 DEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           ++         + ++KT A        +GA++A A   +   L   G  LGI FQL DDL
Sbjct: 183 EQPAALRDALAVAELKTAAYSFQLPLHAGALLAGARPAQLTALDEVGALLGIGFQLIDDL 242

Query: 228 LDCEEDL 234
           L    D 
Sbjct: 243 LGVFGDE 249


>gi|108800235|ref|YP_640432.1| polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119869363|ref|YP_939315.1| polyprenyl synthetase [Mycobacterium sp. KMS]
 gi|126435858|ref|YP_001071549.1| polyprenyl synthetase [Mycobacterium sp. JLS]
 gi|108770654|gb|ABG09376.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. MCS]
 gi|119695452|gb|ABL92525.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. KMS]
 gi|126235658|gb|ABN99058.1| geranylgeranyl-diphosphate synthase [Mycobacterium sp. JLS]
          Length = 359

 Score =  121 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 31/243 (12%)

Query: 16  IDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT- 71
           +   L D L    + A+++ + + +   +   + L GGK++R                  
Sbjct: 15  VTEQLRDYLSARRRDAAYIGSDYAELTAALEEFVLRGGKRLRPAFAYWGWRAVADRPADS 74

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEV 114
             L + +A+E +H  +L+HDD+  +D    RRG PTVH                 Q+   
Sbjct: 75  GVLLLFSALELLHACALVHDDV--IDASATRRGLPTVHRLFADRHADRGWHGSSEQFGLS 132

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            AI+AG+  L +A +I++S    L  + R Q + +         +LGGQ LDI  E    
Sbjct: 133 AAILAGDLSLVWADDIVASVDLPLDAHRRVQRVWADIRT----EVLGGQFLDIAAEASGA 188

Query: 175 TQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             V     + T     +      + GA  A       E     G ++G+ FQL DD+L  
Sbjct: 189 QTVASAMTVNTYKTASYTVSRPLQLGAAAAADRPEVLEIFHQLGTDIGVAFQLRDDVLGV 248

Query: 231 EED 233
             D
Sbjct: 249 FGD 251


>gi|327179707|gb|AEA30255.1| putative isoprenyl diphosphate synthase [Streptomyces sp. Acta
           2897]
          Length = 347

 Score =  121 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 24/239 (10%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              +  +  + ++  L D+   +      +    L      A+ GGK++R  LV   A  
Sbjct: 22  FRDRTAQRMQAVEKRLVDVAADSPDPRVGELTGHL------AVSGGKRMRPLLVLLGAEF 75

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   +      E +H  SL HDD+  MD   +R G P+ + ++ E  A+  G+ LL
Sbjct: 76  GEEWRDGVVDAAVIAELVHISSLYHDDV--MDGAALRHGVPSANARWGERLAVAGGDWLL 133

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQ 181
             A  + ++              +   +      ++ GQ+L++      E  V   F + 
Sbjct: 134 ARAARLAAALGPD----------MVRFNADVAGDLVEGQLLEMTGPAEGEDPVQHFFRVT 183

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPKK 237
             KT AL+  A  +GA+ A A   +   L  +G  LGI FQ++DDLLD     E+  K+
Sbjct: 184 SGKTAALLAMALGAGALQAGAPAGQGRSLMEYGHQLGIAFQISDDLLDLVAPAEETGKE 242


>gi|254819742|ref|ZP_05224743.1| polyprenyl synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 349

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 36/255 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G +  +L+         LD+   +TA ++   +N  + +   + L GGK++R      
Sbjct: 1   MTGAITEQLRRY-------LDERRAETA-YIGNDYNGLIAALEDFVLGGGKRLRPAFAYW 52

Query: 61  CASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI--------- 109
                  +      L + +A+E +H  +L+HDD+  +D+   RRG+PT H+         
Sbjct: 53  GWRAVATDEPDEQVLLLFSALELLHACALVHDDV--IDDSSTRRGRPTTHVQFATLHRDR 110

Query: 110 -------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                  ++    AI+ G+  L +A +I+       +   R + + +         +LGG
Sbjct: 111 GWQGSPERFGASAAILLGDLALAWADDIVFGIDLTPQAQRRIRRVWANIRT----EVLGG 166

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLG 218
           Q LDI  E      +     + T    C+      + G   A    +  +    FG +LG
Sbjct: 167 QYLDIVAEASAAASIASAMNVDTFKTACYTVSRPLQLGVAAAADRPDVHDIFSQFGTDLG 226

Query: 219 IIFQLADDLLDCEED 233
           + FQL DD+L    D
Sbjct: 227 VAFQLRDDVLGVFGD 241


>gi|331696598|ref|YP_004332837.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190]
 gi|326951287|gb|AEA24984.1| Geranyltranstransferase [Pseudonocardia dioxanivorans CB1190]
          Length = 403

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 23/210 (10%)

Query: 44  RYALLGGKKIRSFLVTECASLFNVNHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYI 100
           R+ + GGK+IR             +   A       +A+E +   +L+HDDL  +D+   
Sbjct: 87  RFVVGGGKRIRPTFAWWGWRGAGGDPAAAGAALRAVSALELLQACALVHDDL--IDDSAT 144

Query: 101 RRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           RRG+PTVH+                ++    AI+ G+  L +A + + S         R+
Sbjct: 145 RRGRPTVHVEFAGRHRDGGWSGPADRFGAAAAILLGDIALAWADDTLQSSGLDAAALARA 204

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHAS 203
                      L G     +L              + + KT A  +      GA +A A 
Sbjct: 205 GAPWRAMRTEVLCGQYLD-VLAQATADTSTAAAMRVNRFKTAAYTVERPLHIGAALAGAD 263

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
                  R FG ++GI FQL DD+L    D
Sbjct: 264 DRLVAAYRGFGTDIGIAFQLRDDMLGVFGD 293


>gi|164605008|dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 14/219 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKI-RSFLVTECASLFNVN 68
           Q     ++  LD  L Q    +  +    +   +R+ +L   +     L      L   +
Sbjct: 41  QSYWSSVNADLDTHLKQA---IPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGH 97

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A+   +A+  +H  +  H++LP  D         T    Y     ++  +G++ Y F
Sbjct: 98  RNQAMAAASALRLVHASASTHENLPLTDRPRP--MPRTRPTLYGPNIELLIADGIIPYGF 155

Query: 129 EIISSPKTQLKD--NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM------I 180
           E+++      ++  N   + ++ ++  +G QG++ GQ  + Q E  +  ++F       +
Sbjct: 156 ELLARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNV 215

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
            + K G L   A   GAI+   S++E E+LR +G  +G+
Sbjct: 216 CRKKEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGM 254


>gi|62959205|gb|AAY23710.1| farnesyl diphosphate synthase [Roseobacter sp. JL-129]
          Length = 144

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 7/136 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH ++DE TA++ G+ L T  FE++ SP+   +  +RS L L+L    G +GM
Sbjct: 12  LRRGLPTVHKKWDEGTAVLVGDALQTLGFELVLSPECHPEPAVRSDLALTLAKAAGAKGM 71

Query: 160 LGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LDI  E  D+     ++  +Q  KTGAL+ ++ E+GA +A A       L  + +
Sbjct: 72  VLGQALDIAAETADQPLTLDEIIALQNGKTGALIRWSAEAGARLAKAD---IAPLTAYAD 128

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ADD+LD E
Sbjct: 129 ALGLAFQIADDILDVE 144


>gi|145595766|ref|YP_001160063.1| polyprenyl synthetase [Salinispora tropica CNB-440]
 gi|145305103|gb|ABP55685.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
          Length = 360

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 92/245 (37%), Gaps = 30/245 (12%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECAS-LFNVN 68
            +R+D  L D L+   + M         L  A+  + L GGK++R             ++
Sbjct: 16  RQRVDKALADFLVTRRAWMTDVDASLAPLADAVEAFVLGGGKRLRPAFAYWGYRGAGGID 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT------------- 115
                   AA+E +   +LIHDDL  +D    RRG+P VH+++                 
Sbjct: 76  TEQVATALAALEFVQASALIHDDL--IDRSDTRRGEPAVHLRFTARHRSAGWDGDAAGFG 133

Query: 116 ---AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              AI+ G+  L ++ E++ S         R++ +              GQ LD+  +  
Sbjct: 134 DAAAILLGDLCLVWSDELLHSAGLDPHTVARARPIFDQMRTEVTV----GQYLDVLTQAT 189

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLL 228
            +T V    K+       +  E   ++  A    +         +G  LG  FQL DD+L
Sbjct: 190 GDTSVERAGKVARYKSAKYTVERPLLLGAALADATPEIHAAYSAYGLPLGEAFQLRDDVL 249

Query: 229 DCEED 233
               D
Sbjct: 250 GIFGD 254


>gi|21219102|ref|NP_624881.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|14716951|emb|CAC44181.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)]
          Length = 357

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +L GGK++R  L+ E A L     +  L   A +IE +  + L+HDDL  +D+   RRG 
Sbjct: 51  SLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGG 108

Query: 105 PTVHIQYDE----------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           PT +  Y E             ++AG+  L  +  ++   +  +        + +     
Sbjct: 109 PTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLLEAELPVAVRQAMVEVQTRAATD 168

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQ-NEKERLRC 212
              G +     D      D   +  +   KT    +      G + A A     ++ LR 
Sbjct: 169 TFVGQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPGAHEDELRR 228

Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
           +   +GI  Q+ DD LD   D  
Sbjct: 229 YARLVGICGQMRDDWLDLFGDEG 251


>gi|238060277|ref|ZP_04604986.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
 gi|237882088|gb|EEP70916.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
          Length = 360

 Score =  121 bits (304), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 92/245 (37%), Gaps = 30/245 (12%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECAS-LFNVN 68
            +RID  L   L    + +         +  AI  + L GGK++R              +
Sbjct: 16  RQRIDKALAGFLAGQRTWLTAVDTALVPVAEAIEAFVLGGGKRLRPAFAYWGFRGAGGAD 75

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------D 112
               +   AA+E +   +LIHDDL  MD    RRG+P VH ++                 
Sbjct: 76  ADQVVTALAALEFVQASALIHDDL--MDRSDTRRGEPAVHRRFAARHRGAGWGGDADGFG 133

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
           +  AI+ G+  L ++ E++ S     +   R++ +              GQ LD+  +  
Sbjct: 134 DAAAILLGDLCLVWSDELLHSAGLDPRVVARARPVFDEMRTEVTV----GQYLDVLTQAT 189

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQ----NEKERLRCFGENLGIIFQLADDLL 228
            +T V    K+       +  E   ++  A      + +     +G  LG  FQL DD+L
Sbjct: 190 GDTSVERAGKVARYKSAKYTVERPLLLGAALADAPAHVRAAYSAYGLPLGEAFQLRDDVL 249

Query: 229 DCEED 233
               D
Sbjct: 250 GVFGD 254


>gi|3128225|gb|AAC26705.1| putative trans-prenyltransferase [Arabidopsis thaliana]
          Length = 297

 Score =  121 bits (304), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 79/216 (36%), Gaps = 52/216 (24%)

Query: 37  DRLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLTALR-----------------VG 76
            +L SA  Y     + GK+ RS ++   A+  NV    AL                  + 
Sbjct: 7   PKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIA 66

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
              E IH  SL+HDD+  +D+   RRG  ++++             LL  A E + + +T
Sbjct: 67  EITEMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKVV-----ALLATAVEHLVTGET 119

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                                     ++    ++             KT +L+  +C++ 
Sbjct: 120 M-------------------------EITSSTEQRYSMDYYMQKTYYKTASLISNSCKAV 154

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A++   +         +G NLG+ FQL DD+LD   
Sbjct: 155 AVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTG 190


>gi|261337603|ref|ZP_05965487.1| probably short chain isoprenyl diphosphate synthase
           [Bifidobacterium gallicum DSM 20093]
 gi|270278026|gb|EFA23880.1| probably short chain isoprenyl diphosphate synthase
           [Bifidobacterium gallicum DSM 20093]
          Length = 385

 Score =  121 bits (304), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 81/219 (36%), Gaps = 42/219 (19%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT----------------ALRVGAAIECIHCYSLIHDDL 92
           GGK++R+ L+ E   +      T                 L +  AIE     +L+HDD+
Sbjct: 66  GGKRLRALLLLETYRVMEPTQPTPASDQTPTNQARIKQSVLDLACAIELFQTAALVHDDI 125

Query: 93  PSMDNGYIRRGKPTVHIQ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             +D+  +RRGKP  H                 I+ G+ L T    + S     L D   
Sbjct: 126 --IDDADLRRGKPAAHRALANAGGTLSTGIGLGIMLGDLLATACSVVASEASHALPDP-- 181

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-------FMIQKMKTGALMCFACESG 196
               +        Q +  GQ+LD+  E +              + + KT +         
Sbjct: 182 --NAIERAFMRMQQEVEIGQVLDLAIERMSLDDAQALADASLNVFRWKTASYTTITPLLL 239

Query: 197 AIMAHASQNEKERLR---CFGENLGIIFQLADDLLDCEE 232
           A++A     + E LR     G  LGI FQ+ADDL+D   
Sbjct: 240 AMLAAGMPED-EALRHAIDIGLPLGIAFQIADDLIDVTG 277


>gi|271965184|ref|YP_003339380.1| geranylgeranyl pyrophosphate synthase-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270508359|gb|ACZ86637.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 350

 Score =  121 bits (304), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 91/219 (41%), Gaps = 21/219 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----ALRVGA 77
           D L +   H+   H     +  R    GGK +R  LV   A             A+    
Sbjct: 40  DRLPEEIRHIAGYHAGWWDAEGRPRQGGGKAVRPALVLASAWAAGGEDAETVRAAVPAAV 99

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E +H +SL+HDD+  MD    RR +P     +    AI+AG+        ++ +    
Sbjct: 100 AVELVHDFSLLHDDI--MDGDLTRRHRPAAWSVFGVGEAILAGD--------VLLTLALD 149

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQKMKTGALMCFACE 194
           L        +L+ +    L  +  GQ  D+  E   +  +     +   KTGAL+  ACE
Sbjct: 150 LLAGSPGLRVLTGS----LLRLCSGQSADLAFETRTDVTLAQCVEMAAGKTGALLGCACE 205

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            GA+   A Q+       FG +LG+ FQL DDLL    D
Sbjct: 206 IGALAGGAGQDRAGLFGRFGHHLGLAFQLTDDLLGIWGD 244


>gi|71041848|pdb|1WL3|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R91a Mutant
 gi|71041849|pdb|1WL3|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R91a Mutant
          Length = 299

 Score =  121 bits (304), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    R GK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRAGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|302814167|ref|XP_002988768.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii]
 gi|300143589|gb|EFJ10279.1| hypothetical protein SELMODRAFT_13689 [Selaginella moellendorffii]
          Length = 304

 Score =  121 bits (304), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 15/239 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY--ALLGGKKIRSFLVTECA 62
           L   L    + I+  LD ++    S++      +L  AIRY  A   G+ + + L     
Sbjct: 25  LYKYLSSRGEMIEEELDRIM----SNLVKSCPAQLHKAIRYCTADEEGRHL-ASLCIAAC 79

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +   AL +   IE      L  DDLP MDN   R+G+   H+++D+ TAI+A   
Sbjct: 80  ELVGGDRHAALPMACTIEMWMAIILTTDDLPCMDNARTRKGRAAAHVEFDDTTAILAAQA 139

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMI 180
           L   AF  +        D    +L L    ++ +Q ++ GQ  D++  +      ++   
Sbjct: 140 LAALAFGTVVDSTLVSTDK---RLRLVKEFSLSMQRLVYGQYDDVKKGESLETLEELNAK 196

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
              KT +       +GAI+  A + E E LR FG   G+++Q+ DDL D     E++ K
Sbjct: 197 NTNKTSSFFELPLVAGAIVGGAGEEEIEGLRRFGRYFGLMWQVNDDLSDATMTAEEMGK 255


>gi|256789881|ref|ZP_05528312.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289773764|ref|ZP_06533142.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289703963|gb|EFD71392.1| polyprenyl synthetase [Streptomyces lividans TK24]
          Length = 357

 Score =  121 bits (304), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 15/203 (7%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +L GGK++R  L+ E A L     +  L   A +IE +  + L+HDDL  +D+   RRG 
Sbjct: 51  SLRGGKRMRVVLLHEAARLVTAEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGG 108

Query: 105 PTVHIQYDE----------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           PT +  Y E             ++AG+  L  +  ++   +  +        + +     
Sbjct: 109 PTTYYAYRERFPGRPRAALGLTVLAGDLALALSLRVLLDAELPVAVRQAMVEVQTRAATD 168

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQ-NEKERLRC 212
              G +     D      D   +  +   KT    +      G + A A     ++ LR 
Sbjct: 169 TFVGQIADLERDFTAAVPDAEMLHDVADHKTARYSVLAPMRLGLLAAGAEPGAHEDELRR 228

Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
           +   +GI  Q+ DD LD   D  
Sbjct: 229 YARLVGICGQMRDDWLDLFGDEG 251


>gi|21219099|ref|NP_624878.1| polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|256789883|ref|ZP_05528314.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|289773766|ref|ZP_06533144.1| polyprenyl synthetase [Streptomyces lividans TK24]
 gi|6013088|emb|CAB57417.1| putative polyprenyl synthetase [Streptomyces coelicolor A3(2)]
 gi|289703965|gb|EFD71394.1| polyprenyl synthetase [Streptomyces lividans TK24]
          Length = 352

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 31/242 (12%)

Query: 15  RIDTILDDLLLQTASHMQTQHN------DRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           R+D +L   L + A+H+           D+L  A  +    GK++R+             
Sbjct: 13  RVDGVLRSFLDEEAAHLAAVDAALAPVADQLRKAAGH----GKRLRAAFCYWGWRAAGQP 68

Query: 69  HLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA----------- 116
              AL R  A++E +H  +++HDDL  +D+  +R G PT H+  + V A           
Sbjct: 69  ESDALVRAAASMELVHAAAVVHDDL--IDDSRLRHGLPTAHVALEAVLARDGRPDARTAA 126

Query: 117 ----IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
               ++ G+ L+  A  + ++         R++ + ++     + G     +        
Sbjct: 127 RSLAMLVGDQLMVLAGLLFTTSGLPAAYLARARDLWAVLARELVAGECLEILHTGGPPDT 186

Query: 173 DETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +    + + KT    +      G ++A A+   ++  R +   LG  FQL DDLL   
Sbjct: 187 GTS--LKVVRYKTAKYTVEHPLLIGGLLAGAAPALRDTYRAYALPLGEAFQLRDDLLGLF 244

Query: 232 ED 233
            D
Sbjct: 245 GD 246


>gi|62959207|gb|AAY23711.1| farnesyl diphosphate synthase [Roseobacter sp. JL-135]
          Length = 144

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 7/136 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH ++DE TA++ G+ L T  FE++ SP+      +R+ L LSL   +G +GM
Sbjct: 12  LRRGLPTVHKKWDEGTAVLVGDALQTLGFELVLSPECHPDPAVRTDLALSLAKAVGAKGM 71

Query: 160 LGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LDI  E  D+     ++  +Q  KTGAL+ ++ E+GA +A A       L  + +
Sbjct: 72  VLGQALDIAAETADQPLTLDEIIALQNGKTGALIRWSAEAGARLAQAD---AAPLTAYAD 128

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ADD+LD E
Sbjct: 129 ALGLAFQIADDILDVE 144


>gi|183233246|ref|XP_001913825.1| geranylgeranyl pyrophosphate synthetase [Entamoeba histolytica
           HM-1:IMSS]
 gi|169801661|gb|EDS89395.1| geranylgeranyl pyrophosphate synthetase, putative [Entamoeba
           histolytica HM-1:IMSS]
          Length = 314

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 83/216 (38%), Gaps = 42/216 (19%)

Query: 44  RYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           ++ +  GK++R   +                 +R   A+E +H  +L HDD+  MD   +
Sbjct: 3   KFVMGPGKRLRPLSLLLFFIGGGGKIEEQKNIIRTACAMELLHDSTLAHDDI--MDEDEM 60

Query: 101 RRGKPTV--------------------------HIQYDEVTAIIAGNGLLTYAFEIISSP 134
           RR  PT+                             Y    AI+ GN L + A  +    
Sbjct: 61  RRNAPTIVKTFYDKYIERNKEDVKTEKFLFMSRGTTYASSLAIMTGNILYSMAQRLCLES 120

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
            T +     ++++L L        +  GQ+LD+      E     I  MKT         
Sbjct: 121 GTNI-----AEMVLELFSV-----LNYGQILDMSGLNTVEEYNLNII-MKTAIFFKTTAS 169

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            G  +A  S+++ E  + +GE+ GI FQ+ DDLLD 
Sbjct: 170 IGLTLAGRSEHDIELGKEWGEHFGIAFQMRDDLLDI 205


>gi|71041847|pdb|1WL2|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R90a Mutant
          Length = 299

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D     RGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFARGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|306822517|ref|ZP_07455895.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium dentium ATCC 27679]
 gi|304554062|gb|EFM41971.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium dentium ATCC 27679]
          Length = 391

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 26/251 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL---GGKKIRSFLVTEC 61
            + L++   RI  ++ D +   A          +  A+ R A+    GGK++R+ L  + 
Sbjct: 36  STDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLTLDS 95

Query: 62  ASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----- 110
              F  +          L +  A+E     +L+HDD+  +D+  +RRG+P+ H       
Sbjct: 96  FRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRRGRPSAHRALASGT 153

Query: 111 ----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                     I+ G+ L T + +I +    +L  +          H     G +    ++
Sbjct: 154 HSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAVE 213

Query: 167 IQDEFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIF 221
           +      E  V     + + KT         + G + A    +    L    G  LG+ F
Sbjct: 214 LNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLDASAARDLAMSIGLPLGLAF 273

Query: 222 QLADDLLDCEE 232
           QLADDLLD   
Sbjct: 274 QLADDLLDVIG 284


>gi|294817076|ref|ZP_06775718.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064]
 gi|326446035|ref|ZP_08220769.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294321891|gb|EFG04026.1| Polyprenyl synthase [Streptomyces clavuligerus ATCC 27064]
          Length = 385

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 19/226 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D L L    H+  + +  L++ +R+ +  GG++ R  LV     L          + AA+
Sbjct: 36  DGLDLALHGHVADRLHRALVAPVRHLIDHGGRRWRPALVAHTIELLGGAPERFGPLVAAL 95

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H  SL+ DD+   D   +RRG+PT H  +    A+ AG     +AF+          
Sbjct: 96  ELAHTGSLVVDDVE--DGSAVRRGRPTAHAAFGTAVALNAGTAAY-FAFDRAIDLTLPDD 152

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-------------VFMIQKMKTG 186
            ++  +L       +    M  GQ LD+Q    +                V +  ++K+G
Sbjct: 153 SDLAGELRALFLAALRAAHM--GQALDLQGHHPELEHALTSGESAPVLHSVRLTHRLKSG 210

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L+       A++  A       L  FG  LG  +Q+ DD  D E 
Sbjct: 211 TLVAAGFTMAALVTCAPPALVGALTDFGMALGTAYQITDDTADLEG 256


>gi|8574390|emb|CAB94793.1| geranylgeranyl pyrophosphate synthase [Mycobacterium aurum]
          Length = 371

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 87/234 (37%), Gaps = 23/234 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV 75
           +   LD    +          + +L  +   L  GK +RS  +             ALR 
Sbjct: 34  VTEFLDTHCREALYGAHVDITELVLRGM---LAEGKCVRSTYLYLGWQCGAPADEAALRA 90

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------IQYDEVTAIIA 119
            A++E +H ++L+ DD+  MD   +RRG+P+ H                 ++ E  A++ 
Sbjct: 91  AASLELLHAFALLQDDV--MDESPMRRGRPSAHRAFERWHRERGLPGSSARFGESAAVLL 148

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+  L +A +++           R+             G     + D    F    +V  
Sbjct: 149 GDLCLVWAEQMLRESGVDEAALTRAWPRYDAMRTELAVGQFADLVNDTAG-FPQLDEVLD 207

Query: 180 IQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + + K+G   +    E GA +A         L  +GE +G  FQL DDLL    
Sbjct: 208 VARRKSGNYTVRRPLEIGAALAGCDAEVITVLGRYGEAIGEAFQLRDDLLGVFG 261


>gi|71664964|ref|XP_819457.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener]
 gi|70884759|gb|EAN97606.1| polyprenyl synthase, putative [Trypanosoma cruzi]
          Length = 747

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 12/206 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   +R+ +  GGK  R+F +  C++  + ++    R     E  H  SLI DD+   
Sbjct: 438 DTLFLPVRFLIDRGGKCWRTFFLFACSNALSRDYADTSRCVIITELGHVGSLIIDDIE-- 495

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQLKDNIRSQLMLSLTHN 153
           D   +RRG    H+++   TAI AG      +  F  +SS   +            +   
Sbjct: 496 DGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVPFADVSSLPAEKAKRFYELYFEMMKAA 555

Query: 154 IGLQGM-LGGQMLDIQDEFID------ETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
              QG+ + G    + D          E  +  I   KTGA+    C    ++   S+  
Sbjct: 556 HAGQGLDIRGLGYLMPDVVRTGETKALEDALKAIHTCKTGAICGAICSFACVLTDTSEEV 615

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
              +  FG+ +G+ +Q+ DD+L  + 
Sbjct: 616 TLAMEEFGKAIGLAYQIIDDVLGVKG 641


>gi|296392961|ref|YP_003657845.1| polyprenyl synthetase [Segniliparus rotundus DSM 44985]
 gi|296180108|gb|ADG97014.1| Polyprenyl synthetase [Segniliparus rotundus DSM 44985]
          Length = 340

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 17/183 (9%)

Query: 50  GKKIRSFLVTECASLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           GK  RS L  E AS+ +  H       A+    AIE IH + LIHDD+  MD    RRG+
Sbjct: 53  GKIARSRLCAELASMVDGPHVTIPRERAITAATAIEMIHNFGLIHDDI--MDQDEERRGR 110

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
             V + Y    AI+ G+ LL  A +I +S       +I          N  +  ++ GQ+
Sbjct: 111 KAVWVAYGTGMAILLGDILLATAVKIAASVGNTRIADI---------FNQAIGKLIEGQL 161

Query: 165 LDI-QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           LD+  +      +++ I + KT +L   A  S A +A  +Q + E +  F  + G+ FQ 
Sbjct: 162 LDMGSNIGTTLEELWGIAEKKTASLFELAAMSIAELACVTQRQGEAMESFSRHYGVAFQY 221

Query: 224 ADD 226
            +D
Sbjct: 222 MND 224


>gi|71422877|ref|XP_812265.1| polyprenyl synthase [Trypanosoma cruzi strain CL Brener]
 gi|70877026|gb|EAN90414.1| polyprenyl synthase, putative [Trypanosoma cruzi]
          Length = 747

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 12/206 (5%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   +R+ +  GGK  R+F    C++  + ++    +     E  H  SLI DD+   
Sbjct: 438 DTLFLPVRFLIDRGGKYWRTFFFFACSNALSRDYADTSKCIIITELGHVGSLIIDDIE-- 495

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEIISSPKTQLKDNIRSQLMLSLTHN 153
           D   +RRG    H+++   TAI AG      +  F  ++S   +            +   
Sbjct: 496 DGSSVRRGGKAAHVEFGTPTAINAGTACFFMSVPFAGVNSLPAEKAKRFYELYFEMMKAA 555

Query: 154 IGLQGM-LGGQMLDIQDEFID------ETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
              QG+ + G    + D          E  V  I   KTGA+    C    ++   S+  
Sbjct: 556 HAGQGLDIRGLGYLMPDVVRTGETKALEDAVKAIHTCKTGAICGAICSFACVLTDTSEEV 615

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
            + +  FG+ +G+ +Q+ DD+L  + 
Sbjct: 616 TQAMEEFGKAIGLAYQIIDDVLGVKG 641


>gi|118464723|ref|YP_881525.1| polyprenyl synthetase [Mycobacterium avium 104]
 gi|254774993|ref|ZP_05216509.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118166010|gb|ABK66907.1| polyprenyl synthetase [Mycobacterium avium 104]
          Length = 349

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 36/255 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G +  +L+         L D   +TA ++   ++  + +   + L GGK++R      
Sbjct: 1   MTGAITEQLRRY-------LHDRRAETA-YIGDDYSGLIAALEEFVLNGGKRLRPAFAYW 52

Query: 61  CASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------- 111
                        AL + +A+E +H  +L+HDD+  +D+   RRG+PT H+++       
Sbjct: 53  GWRAVATEAPDDQALLLFSALELLHACALVHDDV--IDDSATRRGRPTTHVRFASLHRDR 110

Query: 112 ---------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                        AI+ G+  L +A +I+       +   R + + +         +LGG
Sbjct: 111 QWQGSPERFGMSAAILLGDLALAWADDIVLGVDLTPQAARRVRRVWANIRT----EVLGG 166

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLG 218
           Q LDI  E      +     + T    C+      + GA  A    +  +    FG +LG
Sbjct: 167 QYLDIVAEASAAASIASAMNVDTFKTACYTVSRPLQLGAAAAADRPDVHDLFSQFGTDLG 226

Query: 219 IIFQLADDLLDCEED 233
           + FQL DD+L    D
Sbjct: 227 VAFQLRDDVLGVFGD 241


>gi|184201731|ref|YP_001855938.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201]
 gi|183581961|dbj|BAG30432.1| geranylgeranyl pyrophosphate synthase [Kocuria rhizophila DC2201]
          Length = 382

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 97/258 (37%), Gaps = 33/258 (12%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           ++       +   L++        +  +     L       L GGK IR  L       F
Sbjct: 27  AEWSAFRAAVTRELEEFFAAPTHRVPRSPGFPVLWERTAQQLAGGKLIRPRLTLIAWRSF 86

Query: 66  ---------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----- 111
                    +V     +R+ A+ E +H   L+HDD+  +D  + RRG+PTV   +     
Sbjct: 87  TAPAGGAVPSVPDAQCVRLAASFEMLHAALLVHDDV--VDRDWRRRGRPTVGELFRRDAA 144

Query: 112 ------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
                        E  AI+AG+ LL  A  + S+       +     ++         G 
Sbjct: 145 AAGAPAHEAEHAGESAAILAGDLLLAGALRLASTCTGDPATSRAVADVVFEAVTASAAGE 204

Query: 160 LGGQMLDIQ---DEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGE 215
           L   +L +     E      +  ++++KT          +G+++A AS  E E+L   G 
Sbjct: 205 LDDLLLSLHRFGAEHPGVQDILDMERLKTATYSFEAPLRAGSLLAGASAEESEQLAHAGA 264

Query: 216 NLGIIFQLADDLLDCEED 233
            LG+ +Q+ DD+L    D
Sbjct: 265 LLGVGYQVVDDVLGTFGD 282


>gi|303398760|emb|CBW46741.1| B318L [African swine fever virus Georgia 2007/1]
          Length = 318

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 91/244 (37%), Gaps = 36/244 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P   +  S+  +TIL++ +             +L     YAL GGK IR  ++ E     
Sbjct: 46  PKNYKTFSEEFETILNNAIE------DGDFKGQLTEPCSYALRGGKYIRPIILMEIVRAC 99

Query: 66  NVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            + H             A E  H  SLI DD+PS DN   RR K TV  ++    A ++ 
Sbjct: 100 QLQHSFGAPIYPAEAALAAEYFHVASLIIDDMPSFDNDVKRRNKDTVWARFGVAKAQMSA 159

Query: 121 NGLLTYAFEIISS---------PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
             L    F+ I           P+    + + + L   ++H++   G   GQ++D  +  
Sbjct: 160 LALTMQGFQNICRQIDWIKEHCPRFPDPNQLGALLCTFVSHSLNSAG--SGQLVDTPE-- 215

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                       KT      A   G ++   S  +   +       G  FQLADD+ D +
Sbjct: 216 ------------KTIPFFKIAFIMGWVLGTGSVEDIGMIERAAHCFGHAFQLADDIKDHD 263

Query: 232 EDLP 235
            D  
Sbjct: 264 TDTG 267


>gi|71041843|pdb|1WL0|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R44a Mutant
 gi|71041844|pdb|1WL0|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima R44a Mutant
          Length = 299

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +   L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLAVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +H  SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVHLASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|153799412|gb|ABS50482.1| NapT7 [Streptomyces sp. CNQ525]
          Length = 357

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 36/248 (14%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTECASLF 65
            +  +R++  L   L           ++R L+A+         GGK++R           
Sbjct: 24  DDLLQRVEDKLASFLTAERDRYAA-MDERALAAVDALTDLVTSGGKRVRPTFCITGYLAA 82

Query: 66  NVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------- 109
             +      +   A +E +H  +LIHDD+  +DN   RRGKPT+H               
Sbjct: 83  GGDPRDPGIVAAAAGLEMLHVSALIHDDI--LDNSAQRRGKPTIHTLYGDLHDSHGWRGE 140

Query: 110 --QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH-NIGLQGMLGGQMLD 166
             ++ E   I+ GN  L Y+ E++          + ++     +  NIG    +      
Sbjct: 141 SRRFGEGIGILIGNLALVYSQELVCQA----PPAVLAEWHRLCSEVNIGQCLDVCAAAEF 196

Query: 167 IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             D  +      ++  +K+G   +      GA  A +  +       +GE +G  FQL D
Sbjct: 197 SADPQLSR----LVALIKSGRYTIHRPLVMGANAA-SRPDLAAAYVEYGEAVGEAFQLRD 251

Query: 226 DLLDCEED 233
           DLLD   D
Sbjct: 252 DLLDAFGD 259


>gi|183601372|ref|ZP_02962742.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219683427|ref|YP_002469810.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|241191129|ref|YP_002968523.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241196535|ref|YP_002970090.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|183218978|gb|EDT89619.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219621077|gb|ACL29234.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|240249521|gb|ACS46461.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240251089|gb|ACS48028.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|295794118|gb|ADG33653.1| bifunctional short chain isoprenyl diphosphatesynthase
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 366

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 95/259 (36%), Gaps = 38/259 (14%)

Query: 6   PSKLQENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTE 60
            S +     RI  ++ D +    T + +         + +  AL    GGK++R+ L  +
Sbjct: 4   SSSIGAIETRIRELVHDYVGVNGTDAPITPALRPMFHTVVDQALASSEGGKRLRALLTLD 63

Query: 61  CASLFNVNHL---------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ- 110
              +                 L    AIE     +L+HDDL  +D+  +RRGKP+ H   
Sbjct: 64  AYDVLAGAPDSTQSRSVRTKVLDFACAIEVFQTAALVHDDL--IDDSDLRRGKPSAHCAL 121

Query: 111 --------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                         ++ G+ L T    I+    T + ++ R    L          +  G
Sbjct: 122 TSFAGARSIGRGLGLMLGDMLATACTLIMEDASTGMVEHRR----LVEAFLSMQHDVEVG 177

Query: 163 QMLDIQDEFIDETQ-------VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC--F 213
           Q+LD+  E +              + + KT +    A    A +A    +E   L C   
Sbjct: 178 QVLDLAIERMPLDDPQALAEASLDVFRWKTASYTTIAPLMLAFLASGMTSEAANLHCHAI 237

Query: 214 GENLGIIFQLADDLLDCEE 232
           G  LG  FQLADDLLD   
Sbjct: 238 GLPLGQAFQLADDLLDVTG 256


>gi|312196601|ref|YP_004016662.1| polyprenyl synthetase [Frankia sp. EuI1c]
 gi|311227937|gb|ADP80792.1| Polyprenyl synthetase [Frankia sp. EuI1c]
          Length = 372

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 93/256 (36%), Gaps = 27/256 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIR-YALLGGKKIRSFLVT 59
             L S   + +  +  +L   L   A+ +       + L++  R   L GGK++RS    
Sbjct: 15  DALSSPSVDVADAVHRLLTAFLDAEAASLTDLDPSLEVLVAVARQMVLGGGKRLRSVFAF 74

Query: 60  ECAS-LFNVNHLTA--LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------ 110
                    +   A  L    A+E +H  +L+HDD+  MD+   RRG PT H        
Sbjct: 75  WGWRGAAGPDRPVAPVLPALGALELLHACALVHDDV--MDDSATRRGLPTAHRAVAARHV 132

Query: 111 ----------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
                     +    AI+ G+  + +A  +  + +      + ++          + G  
Sbjct: 133 ALGWPGDPDEFGHHAAILIGDLCMVWADRLAGNAELPAATLLTAREGYDRMRLEAIAGQF 192

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQN--EKERLRCFGENL 217
              + +   +         + ++KT    +      GA++  A+ +         +G  +
Sbjct: 193 LDLLGNAARDPSPVEHALRVARLKTASYTVVRPLVYGAMLGGATGDGTLARVYTRYGLAV 252

Query: 218 GIIFQLADDLLDCEED 233
           G  FQL DDLL    D
Sbjct: 253 GEAFQLRDDLLGVYGD 268


>gi|237832673|ref|XP_002365634.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma
           gondii ME49]
 gi|211963298|gb|EEA98493.1| hexaprenyl pyrophosphate synthetase protein, putative [Toxoplasma
           gondii ME49]
          Length = 536

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 15/166 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY---------AFEI 130
           E IH  SL+HDD+  +D    RRG+P  H ++   TAI+ G+ LL+          + E+
Sbjct: 243 ELIHTASLMHDDV--IDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEV 300

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQVFMIQKMKTG 186
           +    + ++  ++ +L+ +L+ + G  G    +  +   E +               KT 
Sbjct: 301 MMRMSSVIESLVKGELIQALSDSRGDLGERQAESTEPLREHLKRKSALRTYLTKTYHKTA 360

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  +C   AI+             FG  +G+ FQL DD LD   
Sbjct: 361 SLIAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTA 406


>gi|255023966|ref|ZP_05295952.1| hypothetical protein LmonocyFSL_12090 [Listeria monocytogenes FSL
           J1-208]
          Length = 248

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 11/162 (6%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           AIE IH  S++H     +D+  +RRG+ T+  ++    A+  G+ L   + E ++  K  
Sbjct: 1   AIELIHMASIVH--DDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTQIK-- 56

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
              ++ +  MLS        G +  Q+ D  +            K KT  L+  +C  G 
Sbjct: 57  ---DVAAHKMLSHVTVELSTGEIE-QLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGG 112

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
           +++  S+ + ++L  FG  +G+ FQ+ DD+LD      +L K
Sbjct: 113 VVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGK 154


>gi|10801558|dbj|BAB16692.1| GGPP synthase 2 [Hevea brasiliensis]
          Length = 126

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 2/125 (1%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E TAI+AG+ LL+++FE +++    +  +   + +  L   +G 
Sbjct: 1   NDDLRRGKPTNHKMFGEETAILAGDALLSFSFEHVAAATKNVSPDRVVRAIAELGSAVGA 60

Query: 157 QGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            G++ GQ++DI+ E   +    +  I   KT  L+  A   GAI+  A     ER+R + 
Sbjct: 61  AGLVAGQIVDIESEGKQVTLEDLEYIHINKTSKLLEAAVVCGAIIGGADDESTERVRKYA 120

Query: 215 ENLGI 219
             +G+
Sbjct: 121 RCIGL 125


>gi|13383243|dbj|BAB39472.1| putative GGPP synthase 1 [Metaplexis japonica]
          Length = 127

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  + E  A++AG+ LL +AFE I++    ++       +  L  +IG 
Sbjct: 1   NDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFEYIATATAGVEPARVLAAIGELAKSIGT 60

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++D+       +   Q+  I   KT AL+  +   GAI+   +Q E E+LR F
Sbjct: 61  EGLVAGQVVDLSCTGKSNVGLDQLEFIHIHKTAALLEASVVLGAILGGGTQEEVEKLRRF 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARCIGL 126


>gi|221488090|gb|EEE26304.1| polyprenyl synthetase domain-containing protein, putative
           [Toxoplasma gondii GT1]
          Length = 536

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 15/166 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY---------AFEI 130
           E IH  SL+HDD+  +D    RRG+P  H ++   TAI+ G+ LL+          + E+
Sbjct: 243 ELIHTASLMHDDV--IDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEV 300

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQVFMIQKMKTG 186
           +    + ++  ++ +L+ +L+ + G  G    +  +   E +               KT 
Sbjct: 301 MMRMSSVIESLVKGELIQALSDSRGDLGERQAESREPLREHLKRKSALRTYLTKTYHKTA 360

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  +C   AI+             FG  +G+ FQL DD LD   
Sbjct: 361 SLIAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTA 406


>gi|221508609|gb|EEE34178.1| polyprenyl synthetase domain-containing protein, putative
           [Toxoplasma gondii VEG]
          Length = 536

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 15/166 (9%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY---------AFEI 130
           E IH  SL+HDD+  +D    RRG+P  H ++   TAI+ G+ LL+          + E+
Sbjct: 243 ELIHTASLMHDDV--IDGADTRRGQPATHRRFCNKTAILGGDFLLSRGNGIVAMCGSTEV 300

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQVFMIQKMKTG 186
           +    + ++  ++ +L+ +L+ + G  G    +  +   E +               KT 
Sbjct: 301 MMRMSSVIESLVKGELIQALSDSRGDLGERQAESREPLREHLKRKSALRTYLTKTYHKTA 360

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +L+  +C   AI+             FG  +G+ FQL DD LD   
Sbjct: 361 SLIAESCACLAILMGLPSRWVTWSADFGACVGMAFQLYDDELDFTA 406


>gi|119026031|ref|YP_909876.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium adolescentis ATCC 15703]
 gi|154488796|ref|ZP_02029645.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis
           L2-32]
 gi|118765615|dbj|BAF39794.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium adolescentis ATCC 15703]
 gi|154082933|gb|EDN81978.1| hypothetical protein BIFADO_02103 [Bifidobacterium adolescentis
           L2-32]
          Length = 362

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 22/204 (10%)

Query: 49  GGKKIRSFLVTECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK++R+ L  +    F        +    L +  AIE     +L+HDD+  +D+  +RR
Sbjct: 51  GGKRLRALLTLDAFRAFAPQDVAERDMDAVLDLACAIEVFQTGALVHDDI--IDDSDLRR 108

Query: 103 GKPTVHIQYDEVTAIIA-GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           GKP+ H      T   A G+GL     +++++    + +    +L    +       M  
Sbjct: 109 GKPSAHRALATDTHSDAIGHGLGIMLGDMLATASVDIANKAACRLGSGSSVVSAFLNMHR 168

Query: 162 ----GQMLDIQDEFIDETQVFM-------IQKMKTG-ALMCFACESGAIMAHASQNEKER 209
               GQ+LD+  E                + + KT         E G + A  +  +  R
Sbjct: 169 EVEIGQVLDLAVELNTLDDPEELASASLNVFRWKTASYTTIAPLEFGMLAAGLAPADARR 228

Query: 210 LR-CFGENLGIIFQLADDLLDCEE 232
           L    G  LG+ FQLADDLLD   
Sbjct: 229 LALAIGLPLGLAFQLADDLLDVIG 252


>gi|302388553|ref|YP_003824375.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
 gi|302199181|gb|ADL06752.1| Polyprenyl synthetase [Clostridium saccharolyticum WM1]
          Length = 328

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 11/192 (5%)

Query: 50  GKKIRSFLVTECASLFNVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK IR++      S+   +     A+ + +A+E +H  +L+HDD+  +D+   RRG  T+
Sbjct: 51  GKFIRAY-GLMACSMDEEDKVPADAVTLASAVELLHLATLVHDDV--IDDADTRRGIETL 107

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++ +  A+I G+ LL+          + +    + + +    +   +      Q ++ 
Sbjct: 108 QKRFGKKAAVICGDYLLSL----ALKLASSIPQKNQYEALDMPNYLCRICMGELRQEINN 163

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  +   +   I K KT AL   +   GA+++   + +    R  G ++G+IFQL DD 
Sbjct: 164 GNLDLSVYRYLSIIKGKTAALFEASFHGGAMLSTKDERKLRMYRKAGNDVGMIFQLMDDC 223

Query: 228 LDC--EEDLPKK 237
           +D   EE   KK
Sbjct: 224 IDYEMEETEAKK 235


>gi|325962936|ref|YP_004240842.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469023|gb|ADX72708.1| geranylgeranyl pyrophosphate synthase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 364

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 96/260 (36%), Gaps = 29/260 (11%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSF 56
           M G   L ++  +    +   L   L    S M     D   L+ +I   + GGK++R+ 
Sbjct: 1   MTGAEQLRNEQADFVAAVAGELTGFLTARQSVMSAISPDIEPLMGSISNLVTGGKRLRAL 60

Query: 57  LVTECASLFNVNH--LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY--- 111
           +                 +  GAA+E     +LIHDD+  +D    RRG P+VH ++   
Sbjct: 61  MCYWGWRGAGGEPAAQQIVAAGAALELFQAAALIHDDI--IDRSDTRRGGPSVHRRFTEL 118

Query: 112 -------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                         +  AI+ G+  L+++ E  +    +     R++L+ +L     + G
Sbjct: 119 HGSRGWALDSERFGQAAAILTGDLCLSFSEEAFTDIGERAAAGSRARLIFNLMRAEVMAG 178

Query: 159 MLGGQMLDIQDEFIDET----QVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCF 213
                + ++     D      +   I + K+           G  +A AS         F
Sbjct: 179 QYLDILEEVAGPVRDRAGAVSRAQSIIRFKSAKYSTEHPLALGGALAGASDELLRGYSAF 238

Query: 214 GENLGIIFQLADDLLDCEED 233
              LG  FQL DD+L    D
Sbjct: 239 ALPLGEAFQLRDDVLGVFGD 258


>gi|307325750|ref|ZP_07604950.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306888538|gb|EFN19524.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 766

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 21/219 (9%)

Query: 31  MQTQHNDRLLSAIRYALL-----GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           + T    RL  A+   +L      G+  R ++      L   +      + A  E +H  
Sbjct: 430 LDTAARIRLHQAVAAPVLHLLDNPGRSWRPYVAAAVLCLLGADPEPYRPLTAVTELLHVS 489

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG-------NGLLTYAFE-----IISS 133
           +L+ DD+   DN   RRG+P+VH  +    AI AG       + L+    +     ++  
Sbjct: 490 ALVIDDIQ--DNSPTRRGRPSVHEIFGTAPAITAGTLGYYTFDALIQRVPQADDGTMLRI 547

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
            +  L+D   +        ++        Q +   D      Q+    ++KTG L+    
Sbjct: 548 YRLYLRDLRAAH--AGQALDLAGHHTAFDQAVATGDARPLLDQIRAAHRLKTGMLVRSTA 605

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           E  AI+  A + + + +  + E +GI +Q+ DD+ D   
Sbjct: 606 EVSAILGGADETQLDAICAYFEAVGIAYQITDDVFDLYG 644


>gi|328884962|emb|CCA58201.1| Octaprenyl-diphosphate synthase or Dimethylallyltransferase or
           Geranyltranstransferase (farnesyldiphosphate synthase)
           or Geranylgeranyl pyrophosphate synthetase [Streptomyces
           venezuelae ATCC 10712]
          Length = 349

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 13/190 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IR  LV   A         A++  AA+E  H ++L+HDD+  +D    RR + T  
Sbjct: 63  PGKAIRPALVLAAARALGAEEAPAVKAAAAVELAHNFTLLHDDI--VDEDVTRRHRATAW 120

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +    A+IAG+ +   A  +++                S      +  +  GQ  D  
Sbjct: 121 TVFGVPDALIAGDAMSALALRMLAEDPHPASAA------ASARLAACIIELCAGQQADCA 174

Query: 169 DE-----FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            E      +   +   +   KTGAL+  +C  GA+ A A + E   +  FG   G+ FQL
Sbjct: 175 FEQRGPREVSLDECLAMATAKTGALLGASCAIGALYAGAGEEEVAAMDAFGREAGLAFQL 234

Query: 224 ADDLLDCEED 233
            DDL+    D
Sbjct: 235 IDDLIGIWGD 244


>gi|50955185|ref|YP_062473.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50951667|gb|AAT89368.1| geranylgeranyl pyrophosphate synthase [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 371

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 92/250 (36%), Gaps = 25/250 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECAS 63
            S L  +   +D  L     + ++      +   RL  + R A  GGK++R   +     
Sbjct: 20  ASGLDADLVAVDAALAVFFAERSAAAGDFGHAYRRLWESARDAAEGGKRLRPRFLLSAFH 79

Query: 64  LFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH------------ 108
                      A+R   A E +H   L+HDDL  +D   +RRG+P V             
Sbjct: 80  GLGAPDDRREDAIRTAVAFELLHTAFLLHDDL--IDGDTVRRGRPNVAGEFSADALFRGA 137

Query: 109 -----IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
                  + E  A++AG+ LL  A + ++          R    L     +   G L   
Sbjct: 138 DAPLATVWGESAALLAGDLLLHAASDQLARLDAPAGVRSRLLDALDRAVFVTAAGELADV 197

Query: 164 MLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            L           V  + + KT A  +     +GA++A AS    + L  +G  +G  FQ
Sbjct: 198 GLATGMTARGIPDVLAMTEHKTAAYSVSGPLTAGALLAGASDGLLDVLAHYGRLVGAAFQ 257

Query: 223 LADDLLDCEE 232
           L DDLL    
Sbjct: 258 LGDDLLGVFG 267


>gi|254389342|ref|ZP_05004570.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|197703057|gb|EDY48869.1| geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 355

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 79/192 (41%), Gaps = 27/192 (14%)

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------ 109
           A          +   AA+E  H ++LIHDD+  MD+   RRG PTVH             
Sbjct: 65  AGGGTGLPDEVVSTAAALEMFHAFALIHDDI--MDDSATRRGSPTVHRALADRLGAALDP 122

Query: 110 ----QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
               Q    TAI+ G+  LT++ E++ +P T  +      L+ ++         + GQ L
Sbjct: 123 DQAGQLGVSTAILVGDLALTWSDELLYAPLTPHRLAAVLPLVTAMRAET-----VHGQYL 177

Query: 166 DI---QDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           DI   +    D +    I + KT A  M      GA +A A       L  +    G  F
Sbjct: 178 DITSARRPGTDTSLALRIARYKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAF 237

Query: 222 QLADDLLDCEED 233
           QLADDLL    D
Sbjct: 238 QLADDLLGVFGD 249


>gi|117164792|emb|CAJ88341.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC
           23877]
          Length = 357

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 20/253 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL----LSAIRY-ALLGGKKIRS 55
           M+     +    ++R D +  +     ++ ++     R     L  +R  +L GGK++R 
Sbjct: 1   MSEQPLDRAARCARRFDVLFAEYFETLSATLEAPSFSRFTPECLELLRDLSLRGGKRMRV 60

Query: 56  FLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE- 113
            L+ E A L     +  L   A +IE +  + L+HDDL  +D+   RRG PT +  Y E 
Sbjct: 61  VLLHEAARLVRDEPVDGLDAAALSIELLQTHGLVHDDL--IDDSATRRGGPTTYHAYRER 118

Query: 114 ---------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
                       ++AG+  L  +  ++   +  ++       + +        G +    
Sbjct: 119 FPRHPQAALGLTVLAGDLALALSLRVLLDAELPVEVRQAMVEVQTRAATDTFVGQIADLE 178

Query: 165 LDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQ 222
            D      D+  +  +   K+    +      G + A       +E LR +   +GI  Q
Sbjct: 179 RDFAPAVPDDDVLHDVADHKSARYSVLAPLYLGLLAAGEQPAAFEEELRRYARLVGICGQ 238

Query: 223 LADDLLDCEEDLP 235
           + DD LD   D  
Sbjct: 239 MRDDYLDLFGDAA 251


>gi|13383247|dbj|BAB39474.1| putative GGPP synthase 3 [Metaplexis japonica]
          Length = 127

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  Y E  A++AG+ LL +AFE I +           +++  L   IG 
Sbjct: 1   NDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIVTATKGASSEQLVRVIEELAKCIGS 60

Query: 157 QGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E I +     +  I   KT AL+  +   GAI+  A+  +  +LR F
Sbjct: 61  EGLVAGQVVDICSEGISDVGLEHLEFIHLHKTAALLEGSVVLGAILGGANDVQISKLRKF 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARCIGL 126


>gi|229915238|gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humulus lupulus]
          Length = 279

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 11/173 (6%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L      L   +   A+   +A+  +H  +  H+ LP  D+       P +H  YD  
Sbjct: 59  PSLCVAACELVGGHRSKAIAAASALRLLHAANFTHEHLPLTDSPSP---SPVIHNSYDPS 115

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLDIQ---- 168
             ++  + +L   FE+++      ++N     ++++      G +G+L GQ         
Sbjct: 116 IQLLMPDAILPLGFELLAQSYNPAQNNSDRVLRVIVEFARAFGSKGILDGQYRQRVVSIS 175

Query: 169 --DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             DE  +  +V    + K G +   A   GAI+  A++ E E+LR FG  +G+
Sbjct: 176 NGDEVDNAERVDCSGREKEGKMHACAAACGAILGDANEEETEKLRTFGLYVGM 228


>gi|258652703|ref|YP_003201859.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
 gi|258555928|gb|ACV78870.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
          Length = 385

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 37/208 (17%)

Query: 51  KKIRSFLVTECASLFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K+IR  +     +              + V AA+E +H ++L+HDD+  MD    RRG P
Sbjct: 84  KRIRPTMTYLGWAACAGPDRTGERRQIVTVSAALELLHLFALVHDDV--MDESDSRRGVP 141

Query: 106 TVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           TVH Q                +    AI+AG+  L  A  +I+      +   R  ++  
Sbjct: 142 TVHRQAGRRHAATGAVGDPELFGTSIAILAGDLALAEAEGMIAETPPATRRLWRHLVV-- 199

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM---KTG-ALMCFACESGAIMAHASQN 205
                    ++ GQ  D+         +     +   K+G   +    E GA++A A  +
Sbjct: 200 --------ELVVGQRQDLTGTAARRRDLPFAHSVAILKSGRYTVQRPLELGAVIAGAPDS 251

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
            +  L  +G++LG  F L DD+L    D
Sbjct: 252 TRLALSNYGQHLGEAFALRDDVLGVWGD 279


>gi|42522155|ref|NP_967535.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100]
 gi|39574686|emb|CAE78528.1| octaprenyl diphosphate synthase [Bdellovibrio bacteriovorus HD100]
          Length = 318

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 11/207 (5%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
             +  +L         GGK  R+ L+   ++   +   T L +   IE IH  SL+HDDL
Sbjct: 17  PAYLPKLNKLYEDLFSGGKGFRAKLIRMMSAHLGIEPKTELLLSQTIEFIHNASLLHDDL 76

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
             +D  ++RRGK    ++Y    A++AG+ LL      +S           ++++  L  
Sbjct: 77  --IDRSHLRRGKTAAWLKYTPEYAVLAGDYLLARVMVNLSGHGNIKLVQYTAEVISDLLE 134

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLR 211
              LQ  + G      D F+   Q+  I  +KT +L  +   +  I      +     L 
Sbjct: 135 GEWLQDSVVG------DFFVTMEQLDRIHNLKTASLFKWCIRAPFIAQERYDEELHNILS 188

Query: 212 CFGENLGIIFQLADDLLDCE--EDLPK 236
             G  LG +FQ +DDLLD +   D  K
Sbjct: 189 EMGTLLGQLFQRSDDLLDYDIRNDEGK 215


>gi|331212927|ref|XP_003307733.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298136|gb|EFP74727.1| prenyl transferase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 452

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/315 (17%), Positives = 101/315 (32%), Gaps = 89/315 (28%)

Query: 9   LQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLG---GKKIRSFLVTECAS 63
           LQ      + + ++L  L Q    +    + RL S  +Y L     GK +R  +V   + 
Sbjct: 44  LQAIVDPFELLANELSHLKQNIKALVGSDHLRLNSIAKYYLASAHQGKHLRPLVVLLISQ 103

Query: 64  LFNVNH-----------------------------------------------LTALRVG 76
                                                                    R+ 
Sbjct: 104 ATAAPPLADRPRPTNALHFIDRPISPPEILNDNNSSSDQQGLLPEEAEDSAILPAQRRLA 163

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
              E IH  SL+HDD+  +D    RRG+ +   Q+    +++AG+ LL  A   ++  + 
Sbjct: 164 EIAELIHVSSLLHDDV--IDQAETRRGQASAPRQFGSKLSVLAGDFLLARASLNLARLRN 221

Query: 137 QLKDNIRSQLM-------LSLTHNIGLQGMLGGQMLDIQDEFIDETQ------------- 176
                + S ++       L    +I +  +     L    +  +                
Sbjct: 222 FEVIELISSVISNLVEGELIQLESILVPHLQNPPKLAPSSDPSNLQSTSLAHSPAAFDPR 281

Query: 177 ----VFMIQKMKTGALMCFACESGAIMAH--------ASQNEKERLRCFGENLGIIFQLA 224
                     +KT +L+   C +  I++          +Q   E    FG++LG+ FQ+ 
Sbjct: 282 LFDFYMRKNYLKTASLIAKTCRAAVILSSSSSSPPSPQTQELIEASYQFGKHLGLAFQIV 341

Query: 225 DDLLDCEE---DLPK 236
           DD+LD      +L K
Sbjct: 342 DDILDYTGSEDELGK 356


>gi|309801449|ref|ZP_07695576.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022]
 gi|308221964|gb|EFO78249.1| polyprenyl synthetase [Bifidobacterium dentium JCVIHMP022]
          Length = 359

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 26/251 (10%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALL---GGKKIRSFLVTEC 61
            + L++   RI  ++ D +   A          +  A+ R A+    GGK++R+ L  + 
Sbjct: 4   STDLEQIESRIVELVKDFVTPHADDAVASSCKDVADAVARQAVTSSEGGKRLRALLTLDS 63

Query: 62  ASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----- 110
              F  +          L +  A+E     +L+HDD+  +D+  +RRG+P+ H       
Sbjct: 64  FRAFAADAAKEADFDAVLDLACAVEVFQTAALVHDDI--IDDSDLRRGRPSAHRALASGT 121

Query: 111 ----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                     I+ G+ L T + +I +    +L  +          H     G +    ++
Sbjct: 122 HSDAIGRGLGIMLGDMLATSSVDIANRAARRLSRSDDVVGAFLTMHREVEIGQVLDLAVE 181

Query: 167 IQDEFIDETQV---FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIF 221
           +      E  V     + + KT         + G + A    +    L    G  LG+ F
Sbjct: 182 LNPLDDPEELVRASLNVFRWKTASYTTIAPLKFGMLAAGLDASAARDLAMSIGLPLGLAF 241

Query: 222 QLADDLLDCEE 232
           QLADDLLD   
Sbjct: 242 QLADDLLDVIG 252


>gi|10801560|dbj|BAB16693.1| GGPP synthase 1 [Nicotiana tabacum]
          Length = 127

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  Y E  A++AG+ LL +AFE I++    +  +     +  L  +IG 
Sbjct: 1   NDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIAAATAGVSPSRILAAIGELAKSIGT 60

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ+ DI    +  +    +  I   KT AL+  +   GAI+   +  E E+LR F
Sbjct: 61  EGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTGEEVEKLRRF 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARCIGL 126


>gi|54026371|ref|YP_120613.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
 gi|54017879|dbj|BAD59249.1| putative geranylgeranyl pyrophosphate synthase [Nocardia farcinica
           IFM 10152]
          Length = 369

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 24/247 (9%)

Query: 7   SKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           +++++++ R+   LDD +  +   H+       L   I   + GGK +RS L     S  
Sbjct: 27  TRMRDDTARV---LDDFVRARRREHLGAPETAVLGQVIGDFVAGGKYLRSALHLAGWSTV 83

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY-------------- 111
                 A+R  A+ E +HC++L+ DD+  MD    RRG+P  H+++              
Sbjct: 84  APVGAAAIRAAASAELLHCFALMQDDV--MDESARRRGRPAAHVRFAQWHARQGFSGSSD 141

Query: 112 --DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
              E  A +A +  L +A +++           R+        +    G     + D + 
Sbjct: 142 RFGESAATLAADLCLVWAEQLLRESGVDAAALARALPRYDAMRSELAVGQFRDLVNDARR 201

Query: 170 EFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                  V  + + K+G   +    E GA +A A       L  +G  +G  FQ+ DDLL
Sbjct: 202 RPA-LADVLAVARAKSGHYTVRRPLELGAELAGAPPAVLAALGRYGVAIGEAFQVRDDLL 260

Query: 229 DCEEDLP 235
               D  
Sbjct: 261 GVFGDPG 267


>gi|6449050|gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
 gi|10637873|emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita]
          Length = 313

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 85/217 (39%), Gaps = 18/217 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-----LVTECASL 64
           Q     I+  ++  L      +  +  + +   + +                L      L
Sbjct: 49  QPYWAAIEADIERYL---KKSITIRPPETVFGPMHHLTFAA----PATAASTLCLAACEL 101

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +   A+   AAI  +H  + +H+ LP  D       KP +  +Y     ++ G+G++
Sbjct: 102 VGGDRSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPV-SKPAIQHKYGPNVELLTGDGIV 160

Query: 125 TYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQVFM 179
            + FE+++    P      +   ++++ ++   G +GM+ G  +  +I D       +  
Sbjct: 161 PFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEY 220

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + K K G +       GAI+  A++ E ++LR FG  
Sbjct: 221 VCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLY 257


>gi|254392222|ref|ZP_05007408.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326443937|ref|ZP_08218671.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197705895|gb|EDY51707.1| geranylgeranyl pyrophosphate synthase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 439

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 33/259 (12%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECAS 63
           PS L     R+D  L        + ++    +   +   +R  +  GK++R+        
Sbjct: 72  PSALDTLKVRVDRALATFARDETALLEAVDPELGPVGEQLRAVVARGKRLRAAFCYWGWR 131

Query: 64  LFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---YDEVTAIIA 119
               +     +R  AA+E +H  +++HDDL  +D+  +R G PT H             A
Sbjct: 132 AAGRDDTDDIVRAAAAMELVHAAAVVHDDL--IDHSAVRHGSPTAHRALVPPGRAVGDDA 189

Query: 120 G-------------NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML------ 160
                         + L++++ ++ +          R++ + +      + G        
Sbjct: 190 ARSAAGRALALLAGDLLISWSGQLFTECGLPGAYLNRARPLWATLARELIAGECLEVLRT 249

Query: 161 -----GGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFG 214
                 G         +       I + KT    +      GA++  A     +    +G
Sbjct: 250 GPSVLDGPEGPDGRTPVGADSSLQIVRYKTAKYTVEHPLHIGALLGGAPPALLDTFTAYG 309

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG  FQL DDLL    +
Sbjct: 310 VPLGEAFQLRDDLLGVFGE 328


>gi|146303474|ref|YP_001190790.1| polyprenyl synthetase [Metallosphaera sedula DSM 5348]
 gi|145701724|gb|ABP94866.1| Polyprenyl synthetase [Metallosphaera sedula DSM 5348]
          Length = 279

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 20/227 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E   R   ++D+L+ +     +       +   +Y +  GK+ R  L+            
Sbjct: 2   EFWFRSRAVIDELVEKFLDESKEWET---MEMSKYIMRDGKRFRGTLMFLFNGALGGEEK 58

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A     A E +H  SL  DD+  +D   IRRG       Y     I   N L+  A  I
Sbjct: 59  DAYPGALATEILHSASLALDDI--VDYDEIRRGMKAAWAVYTNRKVIFVSNYLIPTALSI 116

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           IS         +R  + L     +G           ++D +  +       ++KT +L  
Sbjct: 117 ISGYG---DKALRISVDLWKDTAVGA----------LKDMYGKDEDYVRTIELKTASLFK 163

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD-CEEDLPK 236
                 +  +  S    + L   G++LGII+QL DD +D   +D  K
Sbjct: 164 LPTMLSSFSSGRS-EFLDTLMEAGKDLGIIYQLIDDYVDCVTQDKDK 209


>gi|157107955|ref|XP_001650014.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
 gi|108879453|gb|EAT43678.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
          Length = 321

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 19/222 (8%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTA 72
              + IL+    Q+   +Q + +  LL    Y   + GK+ R+ +        N+     
Sbjct: 7   DEFNEILEKCRDQS---LQKEQDAILLEPFAYIQQIPGKQFRAKMALAFNHWLNIPEEKL 63

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +G  ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I AGN +L  A   + 
Sbjct: 64  AAIGEVVQMMHNSSLLIDDIE--DNSILRRGIPVAHKIYGIASTINAGNYVLVLALAKVH 121

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMC 190
                    + ++ +L L    G++       +  +D FI   E +   +   KTG L  
Sbjct: 122 GLGHPEAQQVVTEQLLELHRGQGME-------IYWRDNFICPTEAEYKQMVIRKTGGLFM 174

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A     + +   + +  +L      LG+ FQ+ DD  +   
Sbjct: 175 LAIRLMQLFSD-DKKDFTKLTAI---LGLSFQIRDDYCNLTS 212


>gi|15806412|ref|NP_295118.1| geranylgeranyl diphosphate synthase [Deinococcus radiodurans R1]
 gi|6459152|gb|AAF10966.1|AE001985_3 geranylgeranyl diphosphate synthase [Deinococcus radiodurans R1]
          Length = 329

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 87/226 (38%), Gaps = 15/226 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNH-----LT 71
            +L  +L        T    R  + +R Y   GGK IRS L+   A    ++       +
Sbjct: 4   ELLARVLSLLPETSATPELARFYALLRDYPQRGGKGIRSELLLASARAHGLSESDTGWES 63

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           AL + AA+E    + L+HDD+   D+   RRG+P +H       A+  G+ L  Y +  +
Sbjct: 64  ALWLAAALELFQNWVLVHDDIE--DDSEERRGRPALHHLCGMPVALNVGDALHAYMWAAV 121

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMC 190
                        Q++        L        ++ ++  +       +  +KT    + 
Sbjct: 122 GKANVPGAFEEFLQMVYRTAEGQHLDLA----WVEGREWGLRPADYLQMVGLKTAHYTVI 177

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                GA+ A  +   ++     G  LG  FQ+ DD+L+   D  K
Sbjct: 178 VPLRLGALAAGMAP--QDAFTPAGLALGTAFQIRDDVLNLAGDPVK 221


>gi|323454000|gb|EGB09871.1| hypothetical protein AURANDRAFT_36976 [Aureococcus anophagefferens]
          Length = 439

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 17/185 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHL---------TALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           GK+ R  +V   A    V H             R+G   E IH  SLIHDD+  +D+   
Sbjct: 150 GKRFRPTIVALMAKALPVVHARDDAETCKAKQDRLGQITEMIHVASLIHDDV--LDDADT 207

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG   +H  Y    A+++G+ LL  A  +++  + +    + ++ + SL   +G  G  
Sbjct: 208 RRGGDAIHKMYSNKVAVLSGDYLLARASVLLARLQHKQVVEVMAKALDSL---LGKDGKQ 264

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS--QNEKERLRCFGENLG 218
               +  +D   +          KT +L+C A +S A++A              +G +LG
Sbjct: 265 KKSEIAARD-AKEMELYLRKSYYKTASLICDASKSCALLAGHDFDSATARAAEEYGYHLG 323

Query: 219 IIFQL 223
           + FQ+
Sbjct: 324 LAFQI 328


>gi|242216194|ref|XP_002473906.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726932|gb|EED80866.1| predicted protein [Postia placenta Mad-698-R]
          Length = 258

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 17/163 (10%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH  SL+HDD+  +D   +RRG P+  + +     I+AG+ LL  A   +S        
Sbjct: 1   MIHVASLLHDDV--IDKSPLRRGVPSAPLAFGNKLTILAGDFLLGRASTTLSRLGDNEVV 58

Query: 141 NIRSQLMLSLTHNIGLQ---------GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
            + + ++ +L     LQ         G+ G Q +  ++  I          +KT +LM  
Sbjct: 59  ELIASVIANLVEGEILQLKSVHAEELGLGGVQSVGAENFNI----YLQKTYLKTASLMAK 114

Query: 192 ACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEE 232
              +  ++    + E   E    +G NLGI FQL DD+LD E 
Sbjct: 115 GARAAVVLGGCKEGEVWKEIAYAYGRNLGIAFQLVDDILDYES 157


>gi|255326216|ref|ZP_05367302.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296]
 gi|255296670|gb|EET76001.1| polyprenyl synthase [Rothia mucilaginosa ATCC 25296]
          Length = 410

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 100/277 (36%), Gaps = 48/277 (17%)

Query: 2   NGGLPSKLQENSK----RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRS 55
           +  L  ++ E  +      DT++ +   +    ++   ++   LL AI     GGK++R+
Sbjct: 29  SAHLAERIAEEQRSYLHAFDTLMAEFFTRQRELLEGISSETLPLLEAIESLSTGGKRLRA 88

Query: 56  FLVTECASLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            L            +T        ++ G A+E     +LIHDD+  +D    RRG P+VH
Sbjct: 89  LLSYWGWRGAGGAPVTENRTSWSIVKAGMAVELFQTSALIHDDI--IDRSDTRRGAPSVH 146

Query: 109 IQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
            +                Y     I+AG+  + ++ E+ +S          ++ +     
Sbjct: 147 KRFEAAHEQNSWRGDAFNYGLTGGILAGDLTMAWSAEVFASLGEGAIYGAPARTIFDRMR 206

Query: 153 NIGLQGM---LGGQMLDIQDEFIDETQVFMIQKMKTG--------------ALMCFACES 195
              L G    +  ++L+ +D      +   + + K+               AL     ES
Sbjct: 207 TEVLAGQYLDVYSEVLETEDAQAALQRALNVIRFKSAKYSCEHPFTIGGALALQAAVLES 266

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           GA             R FG  LG  FQL DD L    
Sbjct: 267 GASAVSEQHPVLAGYRAFGLPLGEGFQLRDDELGVFG 303


>gi|284031785|ref|YP_003381716.1| polyprenyl synthetase [Kribbella flavida DSM 17836]
 gi|283811078|gb|ADB32917.1| Polyprenyl synthetase [Kribbella flavida DSM 17836]
          Length = 367

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 86/228 (37%), Gaps = 25/228 (10%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
            +   H        L + +   +  GK +RS                A R  A++E +H 
Sbjct: 35  QRCDEHFTVADTGILRAVLTGFVGQGKFVRSTFAYLGWLCGRPESDAAARAAASLELLHA 94

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVH---------------IQYDEVTAIIAGNGLLTYAFE 129
           ++LI DD+  MD+   RRG  TVH                Q+    A++  +  L +A  
Sbjct: 95  FALIQDDV--MDDSATRRGSATVHVQLAHWAERQRRPVGAQFGRSAAVLLSDLCLVWAER 152

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTG 186
           ++       +   ++  +  L  +     +  GQ  D+ +E         V  I + K+G
Sbjct: 153 MLRESGLPAESLAKALPVYDLLRS----ELAVGQFSDLLNENSAAPSLNAVLDIARRKSG 208

Query: 187 -ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +    E GA+ A  S      LR +G  +G  FQL DDLL    D
Sbjct: 209 NYTVLRPLELGAVAAGCSPQVLAALRQYGTAIGEAFQLRDDLLGVFGD 256


>gi|325283242|ref|YP_004255783.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP]
 gi|324315051|gb|ADY26166.1| Polyprenyl synthetase [Deinococcus proteolyticus MRP]
          Length = 331

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 83/220 (37%), Gaps = 15/220 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASL-----FNVNHLTALRVGA 77
           LL T             + +R Y   GGK IRS L+   A              AL + A
Sbjct: 12  LLPTPEAAPRPELRDFYAMLRDYPQRGGKGIRSELLLLSAQAHGLAEGGAGWERALWLAA 71

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A+E    + LIHDD+  +D+   RRG P +H  +    A+ AG+ L  Y +  +      
Sbjct: 72  ALELFQNWVLIHDDI--VDDSDERRGAPALHKLHGVPLALNAGDALHAYMWAAVQKAGLD 129

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESG 196
              +    ++        L        ++  +  +       + ++KTG   +      G
Sbjct: 130 AGFSEFLTMIHRTAEGQHLDV----SWVEHGEWNLQPADYLEMVRLKTGFYTIVTPLRLG 185

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           A+ A    +        G +LG  FQ+ DD+L+   D  K
Sbjct: 186 ALAAGQPPH--PDFEAAGLSLGTAFQIRDDVLNLTGDPAK 223


>gi|294815586|ref|ZP_06774229.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294328185|gb|EFG09828.1| Polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 442

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 33/259 (12%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECAS 63
           PS L     R+D  L        + ++    +   +   +R  +  GK++R+        
Sbjct: 75  PSALDTLKVRVDRALATFARDETALLEAVDPELGPVGEQLRAVVARGKRLRAAFCYWGWR 134

Query: 64  LFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---YDEVTAIIA 119
               +     +R  AA+E +H  +++HDDL  +D+  +R G PT H             A
Sbjct: 135 AAGRDDTDDIVRAAAAMELVHAAAVVHDDL--IDHSAVRHGSPTAHRALVPPGRAVGDDA 192

Query: 120 G-------------NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML------ 160
                         + L++++ ++ +          R++ + +      + G        
Sbjct: 193 ARSAAGRALALLAGDLLISWSGQLFTECGLPGAYLNRARPLWATLARELIAGECLEVLRT 252

Query: 161 -----GGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFG 214
                 G         +       I + KT    +      GA++  A     +    +G
Sbjct: 253 GPSVLDGPEGPDGRTPVGADSSLQIVRYKTAKYTVEHPLHIGALLGGAPPALLDTFTAYG 312

Query: 215 ENLGIIFQLADDLLDCEED 233
             LG  FQL DDLL    +
Sbjct: 313 VPLGEAFQLRDDLLGVFGE 331


>gi|153799383|gb|ABS50454.1| NapT7 [Streptomyces aculeolatus]
          Length = 357

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 94/250 (37%), Gaps = 40/250 (16%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY----ALLGGKKIRSFLVTECASLF 65
            +  +R++  L   L           ++R L+A+         GGK++R           
Sbjct: 24  DDLLQRVEDKLASFLTAERDRYAA-MDERALAAVDALTDLVTSGGKRVRPTFCITGYLAA 82

Query: 66  NVN--HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------------- 109
             +      +   A +E +H  +LIHDD+  +DN   RRGKPT+H               
Sbjct: 83  GGDAGDPGIVAAAAGLEMLHVSALIHDDI--LDNSAQRRGKPTIHTLYGDLHDSHGWRGE 140

Query: 110 --QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
             ++ E   I+ GN  L Y+ E++          + ++     +          GQ LD+
Sbjct: 141 SRRFGEGIGILIGNLALVYSQELVCQA----PPAVLAEWHRLCSEVNI------GQCLDV 190

Query: 168 QDE---FIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                   D     ++  +K+G   +      GA  A +  +       +GE +G  FQL
Sbjct: 191 CAAAEFSADPELSRLVALIKSGRYTIHRPLVMGANAA-SRPDLAAAYVEYGEAVGEAFQL 249

Query: 224 ADDLLDCEED 233
            DDLLD   D
Sbjct: 250 RDDLLDAFGD 259


>gi|215447707|ref|ZP_03434459.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis T85]
 gi|294995846|ref|ZP_06801537.1| polyprenyl synthetase idsB [Mycobacterium tuberculosis 210]
          Length = 193

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 14/198 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 4   RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 59

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++ 
Sbjct: 60  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTG 117

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 118 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 172

Query: 191 FACESGAIMAHASQNEKE 208
             C  GA++A+A     E
Sbjct: 173 CCCALGALVANADDATIE 190


>gi|10801562|dbj|BAB16694.1| GGPP synthase 2 [Nicotiana tabacum]
          Length = 127

 Score =  118 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  Y E  A++AG+ LL +AFE I++    +  +     +  L  +IG 
Sbjct: 1   NDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGT 60

Query: 157 QGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ+ DI    +  +    +  I   KT AL+  +   GAI+   +  E E+LR F
Sbjct: 61  EGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGGTDEEVEKLRIF 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARCIGL 126


>gi|195013012|ref|XP_001983789.1| GH15381 [Drosophila grimshawi]
 gi|193897271|gb|EDV96137.1| GH15381 [Drosophila grimshawi]
          Length = 337

 Score =  118 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 17/212 (8%)

Query: 20  LDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           L+ +L +T     Q + ++ LL    Y   + GK+ RS L         +      ++G 
Sbjct: 4   LNGILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQIGE 63

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +      
Sbjct: 64  IVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHP 121

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACES 195
               + ++ +L L    G++       +  +D F+   E+   ++   KTG L   A   
Sbjct: 122 EATKVYTEQLLELHRGQGME-------IYWRDSFVCPSESDYKLMTVRKTGGLFMLAIRL 174

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             + + A++ +  +L      LG+ FQ+ DD 
Sbjct: 175 MQLFS-ANKEDYTKLTAI---LGLYFQIRDDY 202


>gi|12231186|dbj|BAB20977.1| putative GGPP synthase [Lactuca indica var. laciniata]
          Length = 126

 Score =  118 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 2/125 (1%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT HI Y E  A++AG+ LL+++FE I++    +  +   + +  L   IG 
Sbjct: 1   NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIATATKGVSSDRILRAIGELAKCIGS 60

Query: 157 QGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++D+  E  D     +  I   KT AL+  +   GAIM   S  E E+LR F 
Sbjct: 61  EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120

Query: 215 ENLGI 219
            ++G+
Sbjct: 121 RSIGL 125


>gi|39645583|gb|AAH63635.1| PDSS1 protein [Homo sapiens]
          Length = 306

 Score =  118 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 16/166 (9%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 120 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 179

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 180 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 237

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           L     L      Q+   ++E             KT +L+  +C++
Sbjct: 238 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKA 277


>gi|322490435|emb|CBZ25694.1| putative polyprenyl synthase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 742

 Score =  118 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 21/217 (9%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L   +R  +  GGK  RS +   C +  +  +    R  A  E +H  SLI DD+   
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLIFVSCCNALSRQYFDCSRYIAVAELLHVGSLIIDDIQ-- 490

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG   VH++Y   TAI AG+      F    + + Q     ++  +  L  ++ 
Sbjct: 491 DNSVVRRGGKCVHVEYGVATAINAGSACY---FMGPRAARIQDLPPEKASRIYKLYFDVL 547

Query: 156 LQGMLGGQMLDIQDEFIDE------------TQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L G  G  +   + +++                +  I   KTGA +   C    ++    
Sbjct: 548 LAGHAGQGLDIYRLDYLMPKVVETGDTSTLVDALDAIHTYKTGAAVGALCSMACVLCETP 607

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC---EEDLPKK 237
               E +  FG  LG+ FQ+ DD L+    E DL ++
Sbjct: 608 TVLSEAMERFGLTLGLAFQIVDDALNIRGFEGDLKEE 644


>gi|119606491|gb|EAW86085.1| prenyl (decaprenyl) diphosphate synthase, subunit 1, isoform CRA_b
           [Homo sapiens]
          Length = 306

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 16/166 (9%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 120 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 179

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 180 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 237

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           L     L      Q+   ++E             KT +L+  +C++
Sbjct: 238 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKA 277


>gi|10801556|dbj|BAB16691.1| GGPP synthase 1 [Hevea brasiliensis]
          Length = 127

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT HI + E  A++AG+ LL +AFE I+     +      + +  L   IG 
Sbjct: 1   NDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGA 60

Query: 157 QGMLGGQMLDIQDEF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E    +D  ++  I   KT  L+  A   GAI+   +  E E+LR +
Sbjct: 61  EGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKY 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARGIGL 126


>gi|312376381|gb|EFR23484.1| hypothetical protein AND_12794 [Anopheles darlingi]
          Length = 299

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 17/212 (8%)

Query: 20  LDDLLLQ-TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
            +D+L +      Q + ++ LL    Y   + GK+IRS L         +       +G 
Sbjct: 4   FNDILAKCRDKSCQKEQDETLLQPFAYIQQIPGKQIRSKLALAINHWLAIPVEKLAPIGE 63

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N +L  A E +      
Sbjct: 64  IVQMLHNSSLLIDDIE--DNSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGHP 121

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACES 195
               + ++ +L L    G++       +  +D F    E++   +   KTG L   A   
Sbjct: 122 DATKVYTEQLLELHRGQGME-------IYWRDNFACPTESEYKQMTIRKTGGLFMLAIRL 174

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             + +    + K+        LG+ FQ+ DD 
Sbjct: 175 MQLFS----DNKKDFSKLAAILGLYFQIRDDY 202


>gi|91076666|ref|XP_971444.1| PREDICTED: similar to AGAP006894-PA [Tribolium castaneum]
 gi|270002646|gb|EEZ99093.1| hypothetical protein TcasGA2_TC004978 [Tribolium castaneum]
          Length = 307

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 16/201 (7%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            +++LL    Y +   GK IRS L        N++      +   +E +H  SL+ DD+ 
Sbjct: 20  QDEKLLQPFTYIMQTPGKNIRSKLARAFNYWLNISEEKLKAIEEIVEMMHNASLLLDDIQ 79

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             DN  +RRG P  H  Y   + I A N ++  A + +         ++ +Q +L L   
Sbjct: 80  --DNSILRRGVPVAHSIYGVPSTINAANYVIFIALQRVLELNHPEAVSVYTQQVLELHRG 137

Query: 154 IGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G++       +  +D +    E +   +   KTG L   A     + +  ++ +  +L 
Sbjct: 138 QGME-------IYWRDSYTCPTEDEYKQMTIRKTGGLFMLAIRLMQLFSE-NKADYTKLT 189

Query: 212 CFGENLGIIFQLADDLLDCEE 232
                LG+ FQ+ DD L+   
Sbjct: 190 GI---LGLFFQIRDDFLNLYS 207


>gi|26376318|dbj|BAB28153.2| unnamed protein product [Mus musculus]
 gi|220941794|emb|CAX15883.1| prenyl (solanesyl) diphosphate synthase subunit 1 [Mus musculus]
          Length = 280

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 16/166 (9%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTAL-------RVGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  A         +    E IH  +L+H
Sbjct: 114 ELKDMSEYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVH 173

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        ++ +Q++  
Sbjct: 174 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIED 231

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
           L     L      Q+   ++E             KT +L+  +C++
Sbjct: 232 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKA 271


>gi|12862621|dbj|BAB32549.1| putative GGPP synthase 1 [Euphorbia tirucalli]
 gi|14041811|dbj|BAB55456.1| putative GGPPsynthase [Euphorbia tirucalli]
          Length = 127

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT HI Y E  A++AG+ LL +AFE I+     +      + +  L   IG 
Sbjct: 1   NDDLRRGKPTNHIVYGEDVAVLAGDALLAFAFEHIAVSTLNVSPARIVRAIGELAKAIGA 60

Query: 157 QGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI  E + E    ++  I   KT  L+  A   GAI+   +  + E+LR +
Sbjct: 61  EGLVAGQVVDISSEGLSEVDLERLEFIHIHKTAKLLEGAVVLGAILGGGTDEQVEKLRKY 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARGIGL 126


>gi|294817027|ref|ZP_06775669.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
 gi|326445912|ref|ZP_08220646.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294321842|gb|EFG03977.1| Geranylgeranyl diphosphate synthase [Streptomyces clavuligerus ATCC
           27064]
          Length = 297

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 79/192 (41%), Gaps = 27/192 (14%)

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------ 109
           A          +   AA+E  H ++LIHDD+  MD+   RRG PTVH             
Sbjct: 7   AGGGTGLPDEVVSTAAALEMFHAFALIHDDI--MDDSATRRGSPTVHRALADRLGAALDP 64

Query: 110 ----QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
               Q    TAI+ G+  LT++ E++ +P T  +      L+ ++         + GQ L
Sbjct: 65  DQAGQLGVSTAILVGDLALTWSDELLYAPLTPHRLAAVLPLVTAMRAET-----VHGQYL 119

Query: 166 DI---QDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           DI   +    D +    I + KT A  M      GA +A A       L  +    G  F
Sbjct: 120 DITSARRPGTDTSLALRIARYKTAAYTMERPLHIGAALAGARPELLAGLSAYALPAGEAF 179

Query: 222 QLADDLLDCEED 233
           QLADDLL    D
Sbjct: 180 QLADDLLGVFGD 191


>gi|227495997|ref|ZP_03926308.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM
           15434]
 gi|226834485|gb|EEH66868.1| geranylgeranyl pyrophosphate synthase [Actinomyces urogenitalis DSM
           15434]
          Length = 405

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 106/275 (38%), Gaps = 50/275 (18%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND------RLLSAIRYALLGGKKIRSFLV-T 59
           S L + ++ +   +D  L Q     + ++ D       LL A    L GGK++R+ L   
Sbjct: 24  SDLSDTARLVRAGVDARLAQVLQERRARYEDLGEAATELLDAAEVLLKGGKRMRALLAGL 83

Query: 60  ECASLFNVNHLTAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-- 110
             A   +    TAL         GAA+E     +L+HDD+  +D    RRG+P  H +  
Sbjct: 84  GIALDSHGPARTALLSSPLVASAGAALELYQASALVHDDV--IDAALTRRGEPAAHRRLA 141

Query: 111 --------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
                         +    AI+ G+ LL+   E +    T++  +  +        +   
Sbjct: 142 QVHRDHGWLTEPLTFGTSGAILLGDLLLSACGEEMGHAVTEVGVSPAAATAARQAFDRMT 201

Query: 157 QGMLGGQMLDIQDEFIDE---------------TQVFMIQKMKTG-ALMCFACESGAIMA 200
             +  GQ LD++ E +                      + + K+    + +    GA++A
Sbjct: 202 SEVAVGQYLDLRSEVVPLPGPEENPVEAGQTMHRNALGVVRRKSARYSVMYPLLIGALLA 261

Query: 201 HASQN--EKERLRCFGENLGIIFQLADDLLDCEED 233
               +     RL  FGE +GI FQL DDLL    D
Sbjct: 262 GVDPDCALAARLAQFGEEVGIAFQLRDDLLGVLGD 296


>gi|296211695|ref|XP_002752610.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like
           [Callithrix jacchus]
          Length = 261

 Score =  118 bits (296), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 25/187 (13%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR- 74
           +T+  +LL+ T+          L     Y   G GK  R  +V   A   N++H  +   
Sbjct: 83  ETLFQELLISTS---------ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHV 133

Query: 75  ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +    E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+ +L+ A 
Sbjct: 134 QASQRTIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAAS 191

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
             ++        +I +Q++  L     L      Q+   ++E             KT +L
Sbjct: 192 IALARIGNTTVISILTQVIEDLVRGEFL------QLGSKENENERFAHYLEKTFKKTASL 245

Query: 189 MCFACES 195
           +  +C++
Sbjct: 246 IANSCKA 252


>gi|62959175|gb|AAY23695.1| farnesyl diphosphate synthase [Planococcus sp. JL-69]
          Length = 144

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 7/136 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH ++DE TA++AG+ L T  FE+++ P       +R+ L LSL    G +GM
Sbjct: 12  MRRGMPTVHRKWDEATAVLAGDALQTLGFELVACPDCHPDAVVRADLALSLARAAGARGM 71

Query: 160 LGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LD+  E     +   Q+  +Q  KTGAL  ++ E+GA MA A       L  +  
Sbjct: 72  VLGQALDMAAEQSDTPLSLDQITALQAGKTGALFGWSAEAGARMARAD---ITPLTGYAR 128

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ADD+LD E
Sbjct: 129 ALGLAFQIADDILDVE 144


>gi|239918588|ref|YP_002958146.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|281415197|ref|ZP_06246939.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|239839795|gb|ACS31592.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
          Length = 358

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 29/225 (12%)

Query: 38  RLLSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTAL-RVGAAIECIHCYSLIHDD 91
            LL ++   +  GK IR  LV        A     +   A+ R+GAA E +H   L+HDD
Sbjct: 38  ELLDSLHVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDD 97

Query: 92  LPSMDNGYIRRGKPTVHIQYDEV-----------------TAIIAGNGLLTYAFEIISSP 134
           +  +D   +RRG+P VH                        A+IAG+ LLT AF + ++ 
Sbjct: 98  V--IDRDVLRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATC 155

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---DIQDEFIDETQVFMIQKMKTG-ALMC 190
                    +  ++     +   G L   +L       E  D  ++  +Q++KT    + 
Sbjct: 156 AADTARAAEAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVG 215

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
               +GA++A A  +    +   G +LG  +Q+ DD+L    D  
Sbjct: 216 APLRAGALLAGADPDLARAMGEAGADLGAAYQVIDDVLGVFGDPG 260


>gi|46241272|gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 93/216 (43%), Gaps = 10/216 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLF 65
           ++ Q     I++ ++  L +    +  +  + +   + +      +  +  L      L 
Sbjct: 36  TRTQTYRATIESDIESYLKKA---IPIRAPESVFEPMHHLTFAAPRTSASALCVAACELV 92

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   A+   AA+  +H  +  H++LP  D       K  +  ++D    ++ G+G++ 
Sbjct: 93  GGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMS---KSEIQHKFDPNIELLTGDGIIP 149

Query: 126 YAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFMIQK 182
           +  E+++      ++N     + ++ LT  +G +G++ GQ  +   ++  D   +  + K
Sbjct: 150 FGLELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCK 209

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
            K G L       GAI+    +++ E+LR FG  +G
Sbjct: 210 KKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVG 245


>gi|297196800|ref|ZP_06914197.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
 gi|197711617|gb|EDY55651.1| polyprenyl synthetase [Streptomyces sviceus ATCC 29083]
          Length = 713

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 86/225 (38%), Gaps = 23/225 (10%)

Query: 26  QTASHMQTQHNDRLLS----AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +    + T   DRL       +R  L   G+  R +       LF  +      + A  E
Sbjct: 370 EQGPPLDTSTQDRLHESLVQPVRMLLDAPGRAWRPYTALSVLCLFGADPEPYRPLAALTE 429

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SLI DD+   D   +RRG+ TVH       AI AG     +AFE +     Q   
Sbjct: 430 LLHTASLIIDDIQ--DGSPLRRGRATVHEVIGTPAAITAGTAAF-FAFEPLLQRIPQHDP 486

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLD------IQDEFID-------ETQVFMIQKMKTGA 187
               ++       +       GQ LD        D  +           +    ++K+G 
Sbjct: 487 ATMLRVYQLCLRALRAGH--AGQALDLSSHQAAFDHAVTTGDNRQLLADIRTTHRLKSGV 544

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +    E  A++A A + +   +  + E +GI++Q++DD+ D + 
Sbjct: 545 PVRCIAEVAAVLADADEAQIRAVGDYFETVGIVYQISDDVADLDG 589


>gi|116670118|ref|YP_831051.1| polyprenyl synthetase [Arthrobacter sp. FB24]
 gi|116610227|gb|ABK02951.1| Polyprenyl synthetase [Arthrobacter sp. FB24]
          Length = 364

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 29/260 (11%)

Query: 1   MNGGLPSKLQENS--KRIDTILDDLLL--QTASHMQTQHNDRLLSAIRYALLGGKKIRSF 56
           M      +L++ +    +   L+D L   Q+     +Q  D L+ +I   + GGK++R+ 
Sbjct: 1   MTVAEQLRLEQTAFVAAVAGKLNDFLATRQSVMSAISQDIDPLMGSISNLVTGGKRLRAL 60

Query: 57  LVTECASLFNVNHLT--ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY--- 111
           +                 +  G+A+E     +LIHDD+  +D    RRG P+VH ++   
Sbjct: 61  MCYWGWRGAGGEAAATEVVTAGSALELFQAAALIHDDI--IDRSDTRRGGPSVHRRFSQL 118

Query: 112 -------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                            AI+ G+  L+++ E  +          +++L+ +L     + G
Sbjct: 119 HEDQGWALDSERFGHAAAILTGDLCLSFSEETFTDIGEAAASGSQARLIFNLMRAEVMAG 178

Query: 159 ----MLGGQMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCF 213
               +L      ++D     ++   I + K+           G  +A AS         F
Sbjct: 179 QYLDILEEVAGPMRDRAGAVSRAQSIIRFKSAKYSTEHPLALGGALAGASDELLRGYSAF 238

Query: 214 GENLGIIFQLADDLLDCEED 233
              LG  FQL DD+L    D
Sbjct: 239 ALPLGEAFQLRDDVLGVFGD 258


>gi|260905289|ref|ZP_05913611.1| Polyprenyl synthetase [Brevibacterium linens BL2]
          Length = 401

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 95/254 (37%), Gaps = 38/254 (14%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
            E S  I+  L+  L        +   D +  A+     GGK IR  L+     L + + 
Sbjct: 38  AEVSAGIEAFLE--LKAAEFLAISPDADDIGRALLEFTRGGKMIRPVLLWWGFQLASGDD 95

Query: 70  LT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------- 111
            +             ++E +H  +LIHDD+  +D+   RRGKP +H Q+           
Sbjct: 96  SSRSALNGGVAEAAGSLELLHAAALIHDDV--IDHSDTRRGKPALHRQFESRHSERRFQG 153

Query: 112 -----DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                    AI+ G+  L  + E+    ++ L     ++ + +      +     GQ LD
Sbjct: 154 GAEPFGVAAAIVIGDICLALSEELFEKSQSVLGITPSARDLRATLRRDVMV----GQYLD 209

Query: 167 IQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHA----SQNEKERLRCFGENLGI 219
           +  E +            ++ +     ++ E   ++  A     + +   +  FG  LG 
Sbjct: 210 VLAEVVPLDDARIGERAWEVLSFKSAKYSVEQPLLLGAALGGADEEQLAEISRFGLPLGQ 269

Query: 220 IFQLADDLLDCEED 233
            FQL DD+L    D
Sbjct: 270 AFQLRDDVLGIFGD 283


>gi|117164674|emb|CAJ88220.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           ambofaciens ATCC 23877]
          Length = 380

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 28/240 (11%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV--NHLTAL 73
           +  +LD  L  + +       D           GGK++R+              +    L
Sbjct: 32  LQEVLDARLRHSRAVDPVFARDVADRVAALVARGGKRLRTAFACCGWRAAGGSGDPAAVL 91

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAI 117
           RVGAA+E +   +L+HDD+  MD    RRG P +H+                 +    A+
Sbjct: 92  RVGAALELLQACALVHDDV--MDGSLQRRGAPALHVELARGHWAAGMHGSAETFGTSAAV 149

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DE 174
           +AG+  L +A ++++          R    L          M+ GQ LD+  +       
Sbjct: 150 LAGDLALVWADDLLTETALGTPHGPR----LHEEWRAMRTEMVAGQYLDLHAQAARSSGV 205

Query: 175 TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   +  +K+    +      GA +A A +   E LR  G   G+ FQL DDLL    D
Sbjct: 206 DEALTVATLKSALYTVARPLALGASLAGADEGTVEALRMAGRCAGLAFQLRDDLLGAFGD 265


>gi|289526778|pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium
 gi|289526779|pdb|3KRA|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium
 gi|289526782|pdb|3KRC|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp
 gi|289526783|pdb|3KRC|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Ipp
 gi|289526786|pdb|3KRF|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
 gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (I)
 gi|289526790|pdb|3KRO|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (Ii)
 gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp, And Dmaspp (Ii)
 gi|289526794|pdb|3KRP|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
          Length = 274

 Score =  117 bits (295), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 18/218 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-----LVTECAS 63
           +Q     I+  ++  L      +  +  + +   + +                L      
Sbjct: 1   MQPYWAAIEADIERYL---KKSITIRPPETVFGPMHHLTFAA----PATAASTLCLAACE 53

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   A+   AAI  +H  + +H+ LP  D       KP +  +Y     ++ G+G+
Sbjct: 54  LVGGDRSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPV-SKPAIQHKYGPNVELLTGDGI 112

Query: 124 LTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQVF 178
           + + FE+++    P      +   ++++ ++   G +GM+ G  +  +I D       + 
Sbjct: 113 VPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIE 172

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            + K K G +       GAI+  A++ E ++LR FG  
Sbjct: 173 YVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLY 210


>gi|119713712|gb|ABL97762.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
           bacterium EB0_41B09]
          Length = 322

 Score =  117 bits (295), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 10/223 (4%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSFLVTECASLFNVNHLTALR 74
           D  LD + +  A   +   ND+ LSA    +    GK +R+ L      L  ++  T + 
Sbjct: 15  DQFLDKVKIDFAKSFEV--NDQFLSAWLSHHGESQGKWLRARLALATGGLLGISSQTYIN 72

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
                E IH  SL+HDD+   D   +RRG+ ++  ++    A+  G+ L+  +F  I+  
Sbjct: 73  WAVVCELIHSASLLHDDIC--DQDNLRRGQTSLWKEFGIPAAVCTGDYLIAESFRKITEI 130

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                  I  + +LS +    + G    + + I    +   Q   +   KT   +     
Sbjct: 131 DQGWHQTILLK-LLSYSVKEIIFG--QSKDISISPYEMTWDQYTKMATNKTAPFIALPMM 187

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
                   S+ E E L+   + LG+ +Q  +DL +    D  K
Sbjct: 188 GMFNCNECSKAECEGLQESSDILGLSYQWLNDLENLIGVDQDK 230


>gi|17481248|dbj|BAB79206.1| farnesyl diphosphate synthase [Rhodovulum sp. CP-10]
          Length = 144

 Score =  117 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 7/136 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PTVH+++D+ TA++ G+ L T AF++++ P       +R  L+ SL    G+ GM
Sbjct: 12  LRRGQPTVHVKWDDGTALLVGDALQTLAFDLLADPACHPDPGVRIDLVASLARASGIDGM 71

Query: 160 LGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ  DI  E     +   ++  +Q  KTGAL+ ++ E+GA +  A       L  +  
Sbjct: 72  VLGQAQDIAAETAGRPLTLAEITELQANKTGALIRWSAEAGARLGRAD---IAPLSSYAT 128

Query: 216 NLGIIFQLADDLLDCE 231
            LG+ FQ+ADD+LD  
Sbjct: 129 ALGLAFQIADDILDAM 144


>gi|289759542|ref|ZP_06518920.1| predicted protein [Mycobacterium tuberculosis T85]
 gi|289715106|gb|EFD79118.1| predicted protein [Mycobacterium tuberculosis T85]
          Length = 230

 Score =  117 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 14/198 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 41  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 96

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++ 
Sbjct: 97  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTG 154

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 155 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 209

Query: 191 FACESGAIMAHASQNEKE 208
             C  GA++A+A     E
Sbjct: 210 CCCALGALVANADDATIE 227


>gi|125977318|ref|XP_001352692.1| GA21189 [Drosophila pseudoobscura pseudoobscura]
 gi|195174424|ref|XP_002027974.1| GL21354 [Drosophila persimilis]
 gi|54641441|gb|EAL30191.1| GA21189 [Drosophila pseudoobscura pseudoobscura]
 gi|194115684|gb|EDW37727.1| GL21354 [Drosophila persimilis]
          Length = 339

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 17/214 (7%)

Query: 18  TILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
             L+ +L +T     Q + ++ LL    Y   + GK+ RS L         +      ++
Sbjct: 2   EELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLAQI 61

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +    
Sbjct: 62  GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQLLG 119

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFAC 193
                 + ++ +L L    G++       +  +D F    E+   ++   KTG L   A 
Sbjct: 120 HPEATKVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAI 172

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + + A++ +  +L      LG+ FQ+ DD 
Sbjct: 173 RLMQLFS-ANKEDYSKLTAI---LGLYFQIRDDY 202


>gi|254384667|ref|ZP_05000006.1| polyprenyl synthetase [Streptomyces sp. Mg1]
 gi|194343551|gb|EDX24517.1| polyprenyl synthetase [Streptomyces sp. Mg1]
          Length = 357

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 11/159 (6%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E  H ++L+HDD+  +D    RRG+ T    +    AII G+ +L  A  +++       
Sbjct: 105 ELAHNFTLLHDDV--IDKDVRRRGRATAWTVFGTPDAIITGDAMLALALRLLAQDGHPAS 162

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACESG 196
               ++L         +  +  GQ  D   E    +   +   +   KTGAL+  AC  G
Sbjct: 163 AAASARL------ATCIIELCAGQQADCAFEQRPDVSLDECLTMAMAKTGALLGCACALG 216

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A+ A A  +E + +  FG   G+ FQL DDL+    D  
Sbjct: 217 ALYAGAGPDEVDAMDAFGREAGLAFQLIDDLIGIWGDPG 255


>gi|41408009|ref|NP_960845.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396364|gb|AAS04228.1| IdsA2_1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 348

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 37/255 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G +  +L+         L D   +TA ++   ++  + +   + L GGK++R      
Sbjct: 1   MTGAITEQLRRY-------LHDRRAETA-YIGDDYSGLIAALEEFVLNGGKRLRPAFAYW 52

Query: 61  CASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------- 111
                        AL + +A+E +H  +L+HDD+  +D+   RRG+PT H+++       
Sbjct: 53  GWRAVATEAPDDQALLLFSALELLHACALVHDDV--IDDSATRRGRPTTHVRFASLHRDR 110

Query: 112 ---------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                        AI+ G+  L +A +I+       +   R + + +         +LGG
Sbjct: 111 QWQGSPERFGMSAAILLGDLALAWADDIVLGVDLTPQAARRVRRVWANIRT----EVLGG 166

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCF----ACESGAIMAHASQNEKERLRCFGENLG 218
           Q LDI  E      +     + T    C+      + GA  A    +  +    FG +LG
Sbjct: 167 QYLDIVAEASAAASIASAMNVDTFKTACYTVSRPLQLGAAAAD-RPDVHDLFSQFGTDLG 225

Query: 219 IIFQLADDLLDCEED 233
           + FQL DD+L    D
Sbjct: 226 VAFQLRDDVLGVFGD 240


>gi|147776970|emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
          Length = 298

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 18/177 (10%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD----NGYIRRGKPTVHIQ 110
             L      LF      A+   +A+  +H  S  H+ +P  D    N   R G PT    
Sbjct: 81  PALCIAACELFGGRRELAIAAASALHLMHAASYFHEHIPLTDQTRPNSPPRPG-PT---- 135

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQ--- 163
           +     ++ G+G++ +  E+++       D+  S    Q+++ LT  IG QG++ GQ   
Sbjct: 136 FGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRXIGSQGVVNGQYIQ 195

Query: 164 -MLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLG 218
              D     + +     I   K G  L       GAI+    + E E+LR +G   G
Sbjct: 196 AQCDESSPSVGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAG 252


>gi|258653364|ref|YP_003202520.1| polyprenyl synthetase [Nakamurella multipartita DSM 44233]
 gi|258556589|gb|ACV79531.1| Polyprenyl synthetase [Nakamurella multipartita DSM 44233]
          Length = 377

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 30/250 (12%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSA---IRYALLGGKKIRSFLVTEC-----AS 63
           ++ R+  ++   L +  + +       +      + +   GGK++R   +         +
Sbjct: 16  DADRLHAVITAELARRRADVAAVDPRLVADVELLVEFVTDGGKRLRPQFLWCGWLAGGGA 75

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------------- 110
               +    L+V AA+E +   +L+HDD+  +D    RRG+P+ H               
Sbjct: 76  ATGPDADAVLQVAAALELLQACALLHDDI--IDRSQRRRGRPSTHRAVAKRAADAGVAAD 133

Query: 111 ---YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
              +    AI+ G+  L +  ++  +    L    R+  +        L G L    +  
Sbjct: 134 PEHHGVSVAILLGDLALAWCDDLFLAGALPLGAAHRAAPVWRAMRTEVLAGQLLDLAVTV 193

Query: 167 --IQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
               D    E     + + KT A  +      GA +A A+      LR +G ++G+ FQL
Sbjct: 194 SAEADPATQERDAMRVNRYKTAAYTIERPLHLGAALAGAAPATIAALRTYGTDIGVAFQL 253

Query: 224 ADDLLDCEED 233
            DDLL    D
Sbjct: 254 RDDLLGVFGD 263


>gi|62089112|dbj|BAD93000.1| trans-prenyltransferase variant [Homo sapiens]
          Length = 297

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)

Query: 38  RLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIH 89
            L     Y   G GK  R  +V   A   N++H  +         +    E IH  SL+H
Sbjct: 127 ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 186

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  +D+   RRGK TV+  + E  A++AG+ +L+ A   ++        +I +Q++  
Sbjct: 187 DDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIED 244

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L     L      Q+   ++E             KT +L+  +C++  + +  S
Sbjct: 245 LVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIANSCKAVCLCSRMS 292


>gi|311895558|dbj|BAJ27966.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 368

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 27/249 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECASLFN 66
           ++  +R++  L + + +  + +    +    +  A+R + L GGK++R            
Sbjct: 15  EDVRERVNRTLGEFMAERTALLSGISDQLGPVSDALRDFLLDGGKRLRPAFCYWGWRAAG 74

Query: 67  V--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ-------------- 110
              +     R  AA+E +   +L+HDDL  MD    RRG P VH +              
Sbjct: 75  GGPDEPGIERAAAALELLQASALVHDDL--MDRSDTRRGLPAVHRRFENLHRAGGWRGDR 132

Query: 111 --YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    A++ G+ LL +  E+             ++ +  L     + G     +  + 
Sbjct: 133 EQYGASAAVLLGDLLLIWCDELFQCSGLPTGAVSSAKPVFDLMRTEVMLGQYLDVLEPVA 192

Query: 169 DEFIDETQVFM---IQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +  D   +     +   K+    +    + GA++A A  +  + L  FG  LG  FQL 
Sbjct: 193 GDSTDADALDRARTVLHYKSAKYTIERPLQVGALLAGAGPDLVDALGGFGLPLGEAFQLR 252

Query: 225 DDLLDCEED 233
           DDLL    D
Sbjct: 253 DDLLGVFGD 261


>gi|195376189|ref|XP_002046879.1| GJ13129 [Drosophila virilis]
 gi|194154037|gb|EDW69221.1| GJ13129 [Drosophila virilis]
          Length = 337

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 20  LDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           L+ +L +T     Q + ++ LL    Y   + GK+ RS L         +      ++G 
Sbjct: 4   LNGILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLTQIGE 63

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +      
Sbjct: 64  IVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHP 121

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACES 195
               + ++ +L L    G++       +  +D F    E+   ++   KTG L   A   
Sbjct: 122 EATKVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             + +  ++ +  +L      LG+ FQ+ DD 
Sbjct: 175 MQLFSD-NKEDYSKLTAI---LGLYFQIRDDY 202


>gi|194865508|ref|XP_001971464.1| GG14418 [Drosophila erecta]
 gi|190653247|gb|EDV50490.1| GG14418 [Drosophila erecta]
          Length = 338

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 17/214 (7%)

Query: 18  TILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
             L+ +L +T     Q + ++ LL    Y   + GK+ RS L         +      ++
Sbjct: 2   EELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQI 61

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +    
Sbjct: 62  GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 119

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFAC 193
                 + ++ +L L    G++       +  +D F    E+   ++   KTG L   A 
Sbjct: 120 HPEATKVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAI 172

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + ++ ++ +  +L      LG+ FQ+ DD 
Sbjct: 173 RLMQLFSN-NKEDYSKLTAI---LGLYFQIRDDY 202


>gi|225552210|ref|ZP_03773150.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1]
 gi|225371208|gb|EEH00638.1| octaprenyl-diphosphate synthase [Borrelia sp. SV1]
          Length = 347

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 10/194 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A        N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG+  +H+ Y    +I AGN +     ++I   ++ LK+N +  +  +    +    
Sbjct: 108 LKRRGESAIHLIYGIDNSINAGNLIYFLPAKLI--ERSNLKENQKLLIYENFFTTLSNLH 165

Query: 159 MLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F   
Sbjct: 166 LGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LK 224

Query: 217 LGIIFQLADDLLDC 230
           LG+ FQ+ DD+ + 
Sbjct: 225 LGVYFQIIDDIKNI 238


>gi|13383239|dbj|BAB39470.1| putative GGPP synthase 3 [Lactuca indica var. laciniata]
          Length = 127

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT H  Y E  A++AG+ LL +AF+ I+S             +  L  +IG 
Sbjct: 1   NDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFQHIASATVGASPERVLAAVGELAKSIGT 60

Query: 157 QGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI     + +   Q+  I   KT AL+  A   GAI+   S  + E+LR F
Sbjct: 61  EGLVAGQVVDIASTGAKDVGLDQLEFIHIHKTAALLEAAVVLGAILGGGSDTQVEKLRKF 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARCIGL 126


>gi|224532172|ref|ZP_03672804.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116]
 gi|224511637|gb|EEF82043.1| octaprenyl-diphosphate synthase [Borrelia valaisiana VS116]
          Length = 347

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A        N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIINRGGKRIRPMIMILLAYALGLKEKNDKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I AGN +     ++I   ++ LK+N +  +  +    +    
Sbjct: 108 LKRRGTSAIHLIYGIDNSINAGNLIYFLPAKLI--ERSNLKENQKLLIYENFFTTLSNLH 165

Query: 159 MLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F   
Sbjct: 166 LGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LK 224

Query: 217 LGIIFQLADDLLDC 230
           LG+ FQ+ DD+ + 
Sbjct: 225 LGVYFQIIDDIKNI 238


>gi|108802037|ref|YP_642234.1| polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119871189|ref|YP_941141.1| polyprenyl synthetase [Mycobacterium sp. KMS]
 gi|108772456|gb|ABG11178.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119697278|gb|ABL94351.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
          Length = 374

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 20/238 (8%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
               ID + + +  + A  ++    D  L  +   +  GK +RS                
Sbjct: 33  RRAAIDAVTEFVTDRCADDLRLTGVDVTLDVLSDFVSDGKCLRSTFAYLGWLAGAAPDDA 92

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVT 115
           ALR  A+ + +H ++L+ DD+  MD+  +RRG+P  H+++                    
Sbjct: 93  ALRAAASFDLLHVFALLQDDV--MDDSPLRRGRPAAHVRFAQWHRDNGLNGSAERFGASA 150

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A++ G+  L +A +++       +   R+             G     + D         
Sbjct: 151 AVLLGDLCLVWAGQMMRESGLGDRALARAWPRYDAMRTELAVGQFADLVNDAGGR-PTLE 209

Query: 176 QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            V  + + K+G   +    E G  +A         L  +G  +G  FQL DDLL    
Sbjct: 210 DVLDVARRKSGNYTVRRPLEIGGALAGCPDATLGLLGRYGAAVGEAFQLRDDLLGIFG 267


>gi|283783163|ref|YP_003373917.1| polyprenyl synthetase [Gardnerella vaginalis 409-05]
 gi|298253930|ref|ZP_06977517.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1]
 gi|283441784|gb|ADB14250.1| polyprenyl synthetase [Gardnerella vaginalis 409-05]
 gi|297532073|gb|EFH71048.1| geranylgeranyl pyrophosphate synthase [Gardnerella vaginalis 5-1]
          Length = 368

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 29/245 (11%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN---- 68
           S++ +T L++ L  T + +  Q    +  AI  +  GGK++R+ L        +      
Sbjct: 23  SQQFNTGLENNLSSTCAQILQQV---IKQAIVSS-EGGKRLRALLTISAFYAASKETNIQ 78

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI---QYDEVTAIIAGNG 122
                +   +  A+E     +LIHDD+  +D  Y+RRGKP+ +    +      I  G G
Sbjct: 79  KIHEQSVFDIACALEVFQTAALIHDDI--IDESYLRRGKPSAYCALSKVCNNKHIGTGLG 136

Query: 123 LLTY---AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----- 174
           L+     A E     + + K+    + +L+       + +  GQ+LD+  E +       
Sbjct: 137 LMLGDLLATESFDIARNRAKNFTYGEELLA-AFASMQRNVGIGQVLDLSIEMMQLDNPIQ 195

Query: 175 --TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDC 230
                  + + KT           G + A+    E   L    G +LG+ FQ+ADDLLD 
Sbjct: 196 LAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQIADDLLDI 255

Query: 231 EEDLP 235
             D  
Sbjct: 256 VSDSK 260


>gi|126438016|ref|YP_001073707.1| polyprenyl synthetase [Mycobacterium sp. JLS]
 gi|126237816|gb|ABO01217.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
          Length = 374

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 87/238 (36%), Gaps = 20/238 (8%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT 71
               ID + + +  + A  ++    D  L  +   +  GK +RS                
Sbjct: 33  RRAAIDAVTEFVTDRCADDLRLTGVDVTLDVLSDFVGDGKCLRSTFAYLGWLAGAAPDDA 92

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVT 115
           ALR  A+ + +H ++L+ DD+  MD+  +RRG+P  H+++                    
Sbjct: 93  ALRAAASFDLLHVFALLQDDV--MDDSPLRRGRPAAHVRFAQWHRDNGLNGSAERFGASA 150

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A++ G+  L +A +++       +   R+             G     + D         
Sbjct: 151 AVLLGDLCLVWAGQMMRESGLGDRALARAWPRYDAMRTELAVGQFADLVNDAGGR-PTLE 209

Query: 176 QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            V  + + K+G   +    E G  +A   +     L  +G  +G  FQL DDLL    
Sbjct: 210 DVLDVARRKSGNYTVRRPLEIGGALAGCPEATLGLLGRYGAAVGEAFQLRDDLLGIFG 267


>gi|302557424|ref|ZP_07309766.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000]
 gi|302475042|gb|EFL38135.1| polyprenyl diphosphate synthase [Streptomyces griseoflavus Tu4000]
          Length = 391

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 28/208 (13%)

Query: 48  LGGKKIRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            GGK++R+              +    LR GAA+E +   +L+HDD+  MD    RRG P
Sbjct: 75  RGGKRLRAAFAFCGWRAAGGTGDATAVLRTGAALELLQACALVHDDV--MDGSLRRRGGP 132

Query: 106 TVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
            +H+                 +   +A++AG+  L +A ++++          R    L 
Sbjct: 133 ALHVELARGHWAAGMHGSAEAFGTSSAVLAGDLALAWADDLLTETALGTPHGGR----LH 188

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQN 205
                    M+ GQ  D+  +        +   I  +K+    +      G  +A A   
Sbjct: 189 EEWRAMRTEMVAGQYRDLHAQAARSSGVDEALDIATLKSALYTVARPLALGGSLAGAGDR 248

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
             + LR  G   G+ FQL DDLL    D
Sbjct: 249 TLDALRAAGRCAGLAFQLRDDLLGAFGD 276


>gi|223888948|ref|ZP_03623539.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b]
 gi|224533104|ref|ZP_03673704.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23]
 gi|226320615|ref|ZP_03796175.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805]
 gi|223885764|gb|EEF56863.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 64b]
 gi|224511831|gb|EEF82232.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi WI91-23]
 gi|226234034|gb|EEH32755.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 29805]
          Length = 347

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A        N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I AGN +     ++I   ++ LK+N +  +  +    +    
Sbjct: 108 LKRRGASAIHLIYGIDNSINAGNLIYFLPAKLI--ERSNLKENQKLLIYENFFTTLSNLH 165

Query: 159 MLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F   
Sbjct: 166 LGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LK 224

Query: 217 LGIIFQLADDLLDC 230
           LG+ FQ+ DD+ + 
Sbjct: 225 LGVYFQIIDDIKNI 238


>gi|195941332|ref|ZP_03086714.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi 80a]
 gi|216264524|ref|ZP_03436516.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a]
 gi|218249896|ref|YP_002374836.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7]
 gi|221217647|ref|ZP_03589115.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a]
 gi|224533848|ref|ZP_03674436.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a]
 gi|225548998|ref|ZP_03769973.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a]
 gi|225550179|ref|ZP_03771139.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a]
 gi|226321631|ref|ZP_03797157.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26]
 gi|215980997|gb|EEC21804.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 156a]
 gi|218165084|gb|ACK75145.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi ZS7]
 gi|221192324|gb|EEE18543.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 72a]
 gi|224513141|gb|EEF83504.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi CA-11.2a]
 gi|225369291|gb|EEG98744.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 118a]
 gi|225370224|gb|EEG99662.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi 94a]
 gi|226232820|gb|EEH31573.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi Bol26]
 gi|312148376|gb|ADQ31035.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi JD1]
 gi|312149235|gb|ADQ29306.1| octaprenyl-diphosphate synthase [Borrelia burgdorferi N40]
          Length = 347

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A        N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I AGN +     ++I   ++ LK+N +  +  +    +    
Sbjct: 108 LKRRGASAIHLIYGIDNSINAGNLIYFLPAKLI--ERSNLKENQKLLIYENFFTTLSNLH 165

Query: 159 MLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F   
Sbjct: 166 LGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LK 224

Query: 217 LGIIFQLADDLLDC 230
           LG+ FQ+ DD+ + 
Sbjct: 225 LGVYFQIIDDIKNI 238


>gi|219684533|ref|ZP_03539476.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr]
 gi|219671895|gb|EED28949.1| octaprenyl-diphosphate synthase [Borrelia garinii PBr]
          Length = 347

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 10/196 (5%)

Query: 40  LSAIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L AI     GGK+IR  ++   A        N     ++   +E  H  SLI DD+   D
Sbjct: 48  LPAIEIINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--D 105

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG   +H+ Y    +I AGN +     ++I   ++ LK+N +  +  +    +  
Sbjct: 106 NSLKRRGGSAIHLIYGTDNSINAGNLIYFLPAKLI--ERSNLKENQKLLIYENFFTTLSN 163

Query: 157 QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
             +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F 
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYSTF- 222

Query: 215 ENLGIIFQLADDLLDC 230
             LG+ FQ+ DD+ + 
Sbjct: 223 LKLGVYFQIIDDIKNI 238


>gi|289573627|ref|ZP_06453854.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           K85]
 gi|289538058|gb|EFD42636.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           K85]
          Length = 282

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 9   DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 62  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 120 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 170 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227


>gi|111115139|ref|YP_709757.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo]
 gi|216263882|ref|ZP_03435876.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1]
 gi|110890413|gb|ABH01581.1| octaprenyl-diphosphate synthase [Borrelia afzelii PKo]
 gi|215979926|gb|EEC20748.1| octaprenyl-diphosphate synthase [Borrelia afzelii ACA-1]
          Length = 347

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A    +         ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIINRGGKRIRPMIMILLAYALGLKEKNNKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I AGN +     ++I   ++ LK+N +  +  +    +    
Sbjct: 108 LKRRGASAIHLIYGIDNSINAGNLIYFLPAKLI--ERSNLKENQKLLIYENFFTTLSNLH 165

Query: 159 MLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F   
Sbjct: 166 LGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LK 224

Query: 217 LGIIFQLADDLLDC 230
           LG+ FQ+ DD+ + 
Sbjct: 225 LGVYFQIIDDIKNI 238


>gi|13383253|dbj|BAB39477.1| putative GGPP synthase 2 [Youngia japonica]
          Length = 127

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT H  Y E  A++AG+ L  +AF+ I+S             +  L  +IG 
Sbjct: 1   NDDFRRGKPTNHKVYGEDVAVLAGDSLFAFAFQHIASATVGASPARVLAAVGELAKSIGT 60

Query: 157 QGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI     + +   Q+  I   KT AL+  A   GAI+   S  + E LR F
Sbjct: 61  EGLVAGQVVDIASTGVKDVGLEQLEFIHIHKTAALLEAAVVLGAILGGGSDTQVEELRTF 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARCIGL 126


>gi|183983198|ref|YP_001851489.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           marinum M]
 gi|183176524|gb|ACC41634.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           marinum M]
          Length = 340

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 85/215 (39%), Gaps = 31/215 (14%)

Query: 44  RYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
            + L GGK++R                    L + +A+E +H ++LIHDD+  +D    R
Sbjct: 24  EFVLSGGKRLRPIFAYRGWQAVTTEDPDPDLLLLFSALELLHAWALIHDDV--IDASSTR 81

Query: 102 RGKPTVH----------------IQYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNI 142
           RG+PT H                 Q+    AI+ G+    +A +IIS             
Sbjct: 82  RGRPTAHMHFAALHRDRNWLGPAQQFGISAAILIGDVAQAWADDIISRVSQSSLSPDAQR 141

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAI 198
           R Q + S         +LGGQ LDI  E       T    +   KT    +    + GA 
Sbjct: 142 RVQRVWSDIRT----EVLGGQYLDIVAEASAADSITSAMTVATFKTACYTVSRPLQLGAA 197

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A    + +E    FG +LG+ FQL DD+L    D
Sbjct: 198 AAADRPDVQEAFHQFGTDLGVAFQLRDDVLGVFGD 232


>gi|15594659|ref|NP_212448.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31]
 gi|2688215|gb|AAC66696.1| octaprenyl-diphosphate synthase (ispB) [Borrelia burgdorferi B31]
          Length = 347

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A        N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIVNRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I AGN +     ++I   K+ LK+N +  +  +    +    
Sbjct: 108 LKRRGASAIHLIYGIDNSINAGNLIYFLPAKLI--EKSNLKENQKLLIYENFFTTLSNLH 165

Query: 159 MLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F   
Sbjct: 166 LGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LK 224

Query: 217 LGIIFQLADDLLDC 230
           LG+ FQ+ DD+ + 
Sbjct: 225 LGVYFQIIDDIKNI 238


>gi|221134021|ref|ZP_03560326.1| hypothetical protein GHTCC_03754 [Glaciecola sp. HTCC2999]
          Length = 292

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 12/219 (5%)

Query: 23  LLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           L+    S +   H+DRLLS +   +    G   R+ +    +   ++    A+   + +E
Sbjct: 17  LVQHNMSTIDESHDDRLLSQMIQYHGTSQGNATRALISLYASDALHLRQQDAVAAASIVE 76

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SLIHDD+   D    RRGKP++  Q+ E  A+ AG+  L+ A+   +      + 
Sbjct: 77  TLHTASLIHDDIQ--DREPHRRGKPSLWHQFGEGPALCAGDFYLSKAYSHCADISQPTQI 134

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDI--QDEFIDETQVFMIQKMKTGALMCFACESGAI 198
               QL+     +  +   + GQ  DI   D          I   K+G L+  A     +
Sbjct: 135 QRLIQLV-----HQSITQTISGQTSDITSTDIRTTSQDYETIAINKSGPLLGLALRIPLL 189

Query: 199 MAHASQNEKER-LRCFGENLGIIFQLADDLLDCEEDLPK 236
           +A    +E +  ++   E   + +Q+ DDL D + D  +
Sbjct: 190 LAGYDDDETQVWMKQCIEPFALSYQIVDDLFDTQIDAEQ 228


>gi|22296798|gb|AAM94362.1| geranylgeranyl pyrophosphate synthase [Agromyces mediolanus]
          Length = 369

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 101/263 (38%), Gaps = 39/263 (14%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           PS+  E  + +    DD +++  +H       RL +A R A  GGK+IR  LV       
Sbjct: 10  PSRQAEVERYLGGFFDDAIVRADAHAADYR--RLWAAARDAASGGKRIRPRLVLGAYDAL 67

Query: 66  NVNHLTA----------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                 A                + + AA E +H   L+HDD+  +D   +RRG+P V  
Sbjct: 68  AAQGAPASGRERADAEPAAAAEAVALAAAFELLHTAFLVHDDV--IDRDLVRRGEPNVAG 125

Query: 110 Q-----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
           +                 Y + +AI+AG+ L+  A  + ++   +      S   L+   
Sbjct: 126 RFALDAALRGLERERADAYGQASAILAGDLLIAAAHSVAAASTCRSSAGEPSSPSLTKCV 185

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR 211
                G     +         E  +  + + KT          +GA++A A +   ERL 
Sbjct: 186 FAAAAGE-HADVRHAAGVRPGEADILAMIEDKTACYSFSAPLRAGALLAGAPRATVERLG 244

Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
             G  LG+ FQL DD+L    D 
Sbjct: 245 EIGRRLGVAFQLQDDVLGVYGDE 267


>gi|154335826|ref|XP_001564149.1| polyprenyl synthase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061183|emb|CAM38205.1| putative polyprenyl synthase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 742

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 12/206 (5%)

Query: 37  DRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D L   +R     GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   
Sbjct: 433 DTLFRPVRSMIDRGGKSWRSLVLVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQ-- 490

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG+  VH++Y   TAI AG+     A           +   R   +       G
Sbjct: 491 DNSMVRRGEKCVHVEYGVATAINAGSACYFMAPRAARIQDLPPEKASRIYQLYFDVLLAG 550

Query: 156 LQGM---------LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
             G          L  ++++  D       +  I   KTG  +   C    ++  A    
Sbjct: 551 HAGQGLDIYGLDYLMPKVIETGDVSTLFDALDAIHTYKTGGAVGTLCAMACVLCEAPAAL 610

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
            E +  FG  LG+ FQ+ DD L+   
Sbjct: 611 SEAVEKFGLTLGLAFQIVDDALNIRG 636


>gi|219685642|ref|ZP_03540457.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04]
 gi|219672830|gb|EED29854.1| octaprenyl-diphosphate synthase [Borrelia garinii Far04]
          Length = 347

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 10/196 (5%)

Query: 40  LSAIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           L AI     GGK+IR  ++   A        N     ++   +E  H  SLI DD+   D
Sbjct: 48  LPAIEIINRGGKRIRPMIMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--D 105

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRG   +H+ Y    +I AGN +     ++I   ++ LK+N +  +  +    +  
Sbjct: 106 NSLKRRGGSAIHLIYGIDNSINAGNLIYFLPAKLI--ERSNLKENQKLLIYENFFTTLSN 163

Query: 157 QGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
             +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F 
Sbjct: 164 LHLGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKIYSTF- 222

Query: 215 ENLGIIFQLADDLLDC 230
             LG+ FQ+ DD+ + 
Sbjct: 223 LKLGVYFQIIDDIKNI 238


>gi|224534236|ref|ZP_03674814.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S]
 gi|224514338|gb|EEF84654.1| octaprenyl-diphosphate synthase [Borrelia spielmanii A14S]
          Length = 347

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  ++   A        N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIISRGGKRIRPMIMILLAYALGLKEKNTKLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG   +H+ Y    +I  GN +     ++I   ++ LK+N +  +  +    +    
Sbjct: 108 LKRRGASAIHLIYGIDNSINTGNLIYFLPAKLI--ERSNLKENQKLMIYENFFTTLSNLH 165

Query: 159 MLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F   
Sbjct: 166 LGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAILTNNEDKAKKIYSTF-LK 224

Query: 217 LGIIFQLADDLLDC 230
           LG+ FQ+ DD+ + 
Sbjct: 225 LGVYFQIIDDIKNI 238


>gi|284991729|ref|YP_003410283.1| polyprenyl synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064974|gb|ADB75912.1| Polyprenyl synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 375

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 85/250 (34%), Gaps = 25/250 (10%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRL--LSAIRYALLGGKKIRSFLVTECASL 64
           +++      + T L D L      +       L  +  +     GGK++R          
Sbjct: 22  AEIDRVRAAVSTALTDFLHVQRQTLAAMDESLLPVVDEVCALADGGKRLRPLFAYWGWRG 81

Query: 65  F-----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI---------- 109
                   +    LR  AA+E +H  +L+HDD+  MD    RRG+P  H+          
Sbjct: 82  VRGERPGESDAAVLRAVAALEFVHASALVHDDV--MDGALTRRGRPATHVGFAARHGDGE 139

Query: 110 ------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
                  +    AI+ G+  L ++ E++           R++ +          G     
Sbjct: 140 LAGDGDTFGIGAAILVGDLALVWSDELLRRSGISTAALSRARTVWDTMRTEVTAGQYLDL 199

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           +         +  + + +    G  +    + GA +A A     E     G  LG  FQL
Sbjct: 200 LRAAGGLPGAQGALTVARYKSAGYTVQRPLQLGAAIAGAGPRAAEVYTAIGLPLGEAFQL 259

Query: 224 ADDLLDCEED 233
            DD+L    D
Sbjct: 260 RDDVLGVFGD 269


>gi|183983209|ref|YP_001851500.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M]
 gi|183176535|gb|ACC41645.1| polyprenyl synthetase IdsB_1 [Mycobacterium marinum M]
          Length = 345

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 11/187 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR+ L    AS    +   A  V AA+E +H +SL+HDD+  MD    RRG+ TV  
Sbjct: 65  GKSIRAALAFGAASACG-DARAAAPVAAAVELMHNFSLVHDDV--MDRDATRRGRATVWA 121

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            + E  AI+ G+ L   A  ++               + S         +  GQ  D   
Sbjct: 122 VWGETNAIVLGDALHALAGRVLVEMLEPEVAANAVMRLESSCVT-----LCDGQFEDCDF 176

Query: 170 EF---IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           E    +       +   KT  LM  AC  GA+ A+A       +  FG  LG+ FQ+ DD
Sbjct: 177 ETRESVSVDGYLEMAAGKTAGLMGCACALGALAANADPATVTAMHQFGFQLGLAFQIVDD 236

Query: 227 LLDCEED 233
           ++    D
Sbjct: 237 VMGLWGD 243


>gi|70606778|ref|YP_255648.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567426|gb|AAY80355.1| polyprenyl synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 283

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 19/220 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E   +   ++DD++ +  S ++      +L   +Y L  GK+ R+ L             
Sbjct: 5   EYWIKTKQLIDDVIQKYLSQIKDLD---MLEVSKYILKDGKRYRAVLNMFFTEALGGELS 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +L    AIE +H  SL  DD+  +D    RRGK +    Y     +   N L+  A  I
Sbjct: 62  NSLDAALAIEILHSSSLALDDI--VDYDTTRRGKLSAWALYTNRRVVFITNYLIPSALNI 119

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           IS      ++ ++  L L     +G           I+D F   T      ++KT +L  
Sbjct: 120 ISRYG---ENALKVSLELWKDTAVGA----------IKDMFGPATSYLSTIELKTSSLFK 166

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    A  A   + + + L   G+ LGI++QL DD +DC
Sbjct: 167 LSTALAAFTAD-REKDLDLLLDMGKYLGIMYQLIDDYIDC 205


>gi|254672305|emb|CBA05414.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275]
          Length = 171

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 72/154 (46%), Gaps = 14/154 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8   FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
              +      + A +E IH  +L+HDD+  +D   +RRG+ T +  +    A++ G+ L 
Sbjct: 61  VGYDDEKLYSLAAMVEFIHTSTLLHDDV--VDESDLRRGRATANNLFGNAAAVLVGDFLY 118

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
           T AF+++ +  +     +R   +++  +    +G
Sbjct: 119 TRAFQLMVASGS-----MRVLEVMADANQHYCRG 147


>gi|323463187|pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus
 gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus
          Length = 273

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 93/216 (43%), Gaps = 10/216 (4%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLF 65
           ++ Q     I++ ++  L +    +  +  + +   + +      +  +  L      L 
Sbjct: 4   TRTQTYRATIESDIESYLKKA---IPIRAPESVFEPMHHLTFAAPRTSASALCVAACELV 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   A+   AA+  +H  +  H++LP  D       K  +  ++D    ++ G+G++ 
Sbjct: 61  GGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMS---KSEIQHKFDPNIELLTGDGIIP 117

Query: 126 YAFEIISSPKTQLKDN--IRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFMIQK 182
           +  E+++      ++N     + ++ LT  +G +G++ GQ  +   ++  D   +  + K
Sbjct: 118 FGLELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLELIEYVCK 177

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
            K G L       GAI+    +++ E+LR FG  +G
Sbjct: 178 KKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVG 213


>gi|289706465|ref|ZP_06502819.1| polyprenyl synthetase [Micrococcus luteus SK58]
 gi|289556784|gb|EFD50121.1| polyprenyl synthetase [Micrococcus luteus SK58]
          Length = 358

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 29/225 (12%)

Query: 38  RLLSAIRYALLGGKKIRSFLV-----TECASLFNVNHLTAL-RVGAAIECIHCYSLIHDD 91
            LL ++   +  GK IR  LV        A     +   A+ R+GAA E +H   L+HDD
Sbjct: 38  ELLDSLHVHVGAGKLIRPRLVELGWRLATADPVPPSGRAAVDRLGAAFELLHTALLVHDD 97

Query: 92  LPSMDNGYIRRGKPTVHIQYDEV-----------------TAIIAGNGLLTYAFEIISSP 134
           +  +D   +RRG+P VH                        A+IAG+ LLT AF + ++ 
Sbjct: 98  V--IDRDTLRRGQPAVHASARHRLEARGVPAADAAHAGVAVALIAGDVLLTQAFRLAATC 155

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQML---DIQDEFIDETQVFMIQKMKTG-ALMC 190
              +     +  ++     +   G L   +L       E  D  ++  +Q++KT    + 
Sbjct: 156 AADIARAAEAAAVVFDAAAVTAAGELEDVLLGLSRHTGEEPDPDRILAMQRLKTAHYTVG 215

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
               +GA++A A       +   G +LG  +Q+ DD+L    D  
Sbjct: 216 APLRAGALLAGADPGLARAMGEAGADLGAAYQVIDDVLGVFGDPG 260


>gi|54024172|ref|YP_118414.1| polyprenyl synthase [Nocardia farcinica IFM 10152]
 gi|54015680|dbj|BAD57050.1| putative polyprenyl synthase [Nocardia farcinica IFM 10152]
          Length = 385

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 19/235 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S + E   ++D  + ++LL T       +   L +        GK++R+ L   CA L  
Sbjct: 66  SPIAEQIGQVDRRMREILL-TGGEFDDIYRHILTAP-------GKRVRAGLALACAQLIP 117

Query: 67  VNH----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    AL +    E  H  SL+HDD+   D   +RR  P+V   +    A  AG  
Sbjct: 118 SPDAAPVHDALDIACVWEMFHESSLVHDDIC--DGSPLRRDAPSVPAAFGVRRAARAGFH 175

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLS-LTHNIGLQGMLGGQMLDIQDEFIDET----QV 177
           L   A ++++           +    + +T+   L  +  GQ+++     +D        
Sbjct: 176 LAGKALQVLARVIADNPAAFGTVGTAAGVTYLDRLSDLSLGQLVETIPPTVDHRALRGHY 235

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KTG L   AC  G        +    L  + E L   FQ+ DD+ D + 
Sbjct: 236 ARVAAAKTGTLFRLACAYGGTAGALEHDRLRDLMDYAERLAFAFQVMDDVRDVDG 290


>gi|256395056|ref|YP_003116620.1| polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
 gi|256361282|gb|ACU74779.1| Polyprenyl synthetase [Catenulispora acidiphila DSM 44928]
          Length = 340

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 18/154 (11%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H ++L+HDD+  +D    RR +PT    +    AI+AG+ +L  A  ++           
Sbjct: 95  HNFTLLHDDV--IDRDQTRRHRPTAWTVFGAENAILAGDAMLALALRLVGGEAASRL--- 149

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIM 199
                        +  +  GQ  D   E  D+  +     +   KTGAL+  AC  G + 
Sbjct: 150 ----------AECVIEICDGQYEDCAFELRDDVTLDECLAMAGKKTGALLGCACALGGLA 199

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             A       L  FG  LG+ FQL DDLL    D
Sbjct: 200 VRADPLTVAALDLFGRELGMAFQLTDDLLGIWGD 233


>gi|167947660|ref|ZP_02534734.1| farnesyl-diphosphate synthase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 111

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 3/110 (2%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
             R++  LD  L           +          L  GK+IR  L         V     
Sbjct: 5   QNRVEHALDKSLPARE---HIPRSPPFRRCATQCLAAGKRIRPILTYATGQALGVEINQL 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                A+E IH YSL+HDDLP+MD+  +RRG+PT H  YDE TAI+ G+ 
Sbjct: 62  DTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDA 111


>gi|25027199|ref|NP_737253.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
           YS-314]
 gi|259506664|ref|ZP_05749566.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
           YS-314]
 gi|23492480|dbj|BAC17453.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
           YS-314]
 gi|259165748|gb|EEW50302.1| geranylgeranyl pyrophosphate synthase [Corynebacterium efficiens
           YS-314]
          Length = 374

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 31/212 (14%)

Query: 46  ALLGGKKIRSFLVTEC-------ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AL GGK +R  ++          A+    N   AL++  A E +H   L+HDD+  +D  
Sbjct: 55  ALRGGKLVRPRMLLGTHRTMTADATAGTANREAALQIAVATELLHFAFLVHDDV--IDGD 112

Query: 99  YIRRGKPTV---------------------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
             RRGK                        H+ +     I+ GN  L    ++ +     
Sbjct: 113 LYRRGKLNFIGQILKQRDPDNFSDRGPDPEHLHWACSNGILIGNLFLAATHQVFARVDLP 172

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESG 196
               +R   +L  T N  L G      L  +    D +    + ++KT          + 
Sbjct: 173 HPTRLRLLDLLDHTMNDSLVGEFLDVGLSSRAITPDISTALEMSRLKTATYTFELPLRAA 232

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           AI+A  S+ +++++   G +LG  +QL DD L
Sbjct: 233 AILAGLSEEDEQKVGVIGTHLGTAYQLQDDYL 264


>gi|62959223|gb|AAY23719.1| farnesyl diphosphate synthase [Prochlorococcus marinus str. SS2]
          Length = 145

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 2/134 (1%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRGKPT HI + E TA++AG+ L   AF +++  +T     +R+++   L    G  GM
Sbjct: 12  MRRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGM 71

Query: 160 LGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            GGQM+D+  E        V  +Q++KTGAL+    E GAI+   ++  +  LR +  +L
Sbjct: 72  AGGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDL 131

Query: 218 GIIFQLADDLLDCE 231
           G+ FQ+ADD+LD E
Sbjct: 132 GLAFQIADDILDVE 145


>gi|194747643|ref|XP_001956261.1| GF24684 [Drosophila ananassae]
 gi|190623543|gb|EDV39067.1| GF24684 [Drosophila ananassae]
          Length = 338

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 17/214 (7%)

Query: 18  TILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
             L+ +L +T     Q + ++ LL    Y   + GK+ RS L         +      ++
Sbjct: 2   EELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPAEKLAQI 61

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +    
Sbjct: 62  GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLG 119

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFAC 193
                 + ++ +L L    G++       +  +D F    E+   ++   KTG L   A 
Sbjct: 120 HPEATKVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAI 172

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + + +++ +  +L      LG+ FQ+ DD 
Sbjct: 173 RLMQLFS-SNKEDYSKLTAI---LGLYFQIRDDY 202


>gi|241768108|ref|ZP_04765590.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
 gi|241360555|gb|EER57605.1| Polyprenyl synthetase [Acidovorax delafieldii 2AN]
          Length = 172

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 18/152 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFN------------ 66
           LD++     + +       L  A+RYA+L GGK++R  LV       +            
Sbjct: 21  LDEVERALGNWVGDGAPAGLGEAMRYAVLDGGKRLRPLLVLAAFEAVHGEAVAAGAADGN 80

Query: 67  -----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                     ALR   A+E IH YSL+HDD+P MDN  +RRGKPTVH+Q+ E  A++AG+
Sbjct: 81  AALRAGMQAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGD 140

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            L  +AFE+++    ++   +++ L   L   
Sbjct: 141 ALQAFAFELLTPEDERIPPAVQATLCRQLARA 172


>gi|145294798|ref|YP_001137619.1| hypothetical protein cgR_0745 [Corynebacterium glutamicum R]
 gi|14517651|gb|AAK64296.1|AF159510_1 GGPP synthase [Corynebacterium glutamicum]
 gi|140844718|dbj|BAF53717.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 382

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 90/239 (37%), Gaps = 30/239 (12%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-----NVNHLTALRVGAA 78
           L Q  S    +    L +A + AL GGK IR  ++             V   T L+V AA
Sbjct: 44  LSQQCSTYPPEFRTCLDAAFQ-ALRGGKLIRPRMLLGLYDALVDDDIEVKLNTVLQVAAA 102

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTV---------------------HIQYDEVTAI 117
           +E +H   L+HDD+  +D    RRGK                        H+ + +   +
Sbjct: 103 LELLHFSLLVHDDV--IDGDLYRRGKLNFIGQILIHRTPESFAQTQRDPEHLDWAQSNGL 160

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + GN  L    +I +         +R   +L+ T N  + G      L  +    +    
Sbjct: 161 LMGNLFLAATHQIFARLDLPHPQRVRLLDLLNHTMNDTIVGEFLDVGLSSKAISPNMDIA 220

Query: 178 FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + ++KT          + AI+A   Q  + ++   G NLGI +QL DD L    D  
Sbjct: 221 LEMSRLKTATYSFELPMRAAAILAELPQEIETQIGEIGTNLGIAYQLQDDYLSTFGDAA 279


>gi|195428727|ref|XP_002062417.1| GK17525 [Drosophila willistoni]
 gi|194158502|gb|EDW73403.1| GK17525 [Drosophila willistoni]
          Length = 361

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 17/212 (8%)

Query: 20  LDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           L+ +L +T     Q + ++ LL    Y   + GK+ RS L         +      ++G 
Sbjct: 4   LNSILQKTKDKSTQKEQDEILLQPFSYIQEIPGKQFRSELALAFNHWLLIPAEMLTQIGD 63

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +      
Sbjct: 64  IVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLGHP 121

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACES 195
               + ++ +L L    G++       +  +D F    E+   ++   KTG L   A   
Sbjct: 122 EATRVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             + + +++ +  +L      LG+ FQ+ DD 
Sbjct: 175 MQLFS-SNKEDYSKLTAI---LGLYFQIRDDY 202


>gi|282865685|ref|ZP_06274735.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282559329|gb|EFB64881.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 363

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 20/246 (8%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIR-YALLGGKKIRSFLVTECA 62
           +   + +R + + ++        +     +++    +  +R  ++ GGK++R  L+ E A
Sbjct: 14  RAAAHERRFNALFEEYFDTLDRTLDAPSFSRYAPECVQLLRELSMRGGKRMRVVLLHEAA 73

Query: 63  SLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-------- 113
            L +      L   A +IE +H + L+HDDL  +D+   RRG P+ +  Y E        
Sbjct: 74  GLVSAEPAEGLDAAALSIELLHTHGLVHDDL--IDDSPTRRGGPSTYYAYRERFPRLPQA 131

Query: 114 --VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
                ++AG+  L  +  ++   +  +          +        G +     D     
Sbjct: 132 ALGLTVLAGDLALGLSLRVLLEARLPVALRQAMAEAQTRAAADTFVGQIVDLERDFTGAV 191

Query: 172 IDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLD 229
             E  +  +   K+    +      G + A       ++ LR +   +GI  Q+ DD LD
Sbjct: 192 PGEDVLHSVADFKSARYSVLAPMRLGLLAAGGQPEAFDQELRRYARLVGICGQMRDDYLD 251

Query: 230 CEEDLP 235
              D  
Sbjct: 252 LYGDAE 257


>gi|254821741|ref|ZP_05226742.1| IdsA2_2 [Mycobacterium intracellulare ATCC 13950]
          Length = 359

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 94/248 (37%), Gaps = 21/248 (8%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQT-ASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
                   E  +R+   + + + Q  A+ +     + +   +   + GGK +RS  V   
Sbjct: 8   DDFGEWRSEVRRRVLVEVAEFVAQRRAADLDGAGIEAVGDILADFVSGGKCLRSTFVYLG 67

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------ 109
                     ALR  A+ E +H ++L+ DD+  MD   +RRG+P+ H             
Sbjct: 68  WLCGAPADPAALRAAASFELVHAFALLQDDV--MDGSDVRRGRPSAHRQFGRWHRERGLP 125

Query: 110 ----QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
               ++ E  AI+ G+  L +A +++       +    +             G     + 
Sbjct: 126 GASRRFGESAAILLGDLCLIWAEQMLRDSGIDPRRLQLAWPRYDAMRTELAVGQFADLIN 185

Query: 166 DIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           D + +      V  + + K+G   +    E GA MA    +   +L  +G  +G  FQL 
Sbjct: 186 DAR-QAPGLEFVLDVARRKSGNYTVRRPLEIGAAMAGCGAHTLCQLGRYGRAVGEAFQLR 244

Query: 225 DDLLDCEE 232
           DD+L    
Sbjct: 245 DDVLGVFG 252


>gi|12082285|dbj|BAB20883.1| GGPP synthase [Taraxacum japonicum]
          Length = 127

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 3/126 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT H  Y E  A++AG+ LL +AF+ I+S             +  L  +IG 
Sbjct: 1   NDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAFQHIASATVGASPARVLAAVGELAKSIGT 60

Query: 157 QGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +G++ GQ++DI     + +   Q+  I   KT AL+  A   GAI+   S  + E+LR F
Sbjct: 61  EGLVAGQVVDIASTGAKDVGLEQLEFIHIHKTAALLEAAVVLGAIVGGGSDTQVEKLRKF 120

Query: 214 GENLGI 219
              +G+
Sbjct: 121 ARCIGL 126


>gi|312881852|ref|ZP_07741623.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370498|gb|EFP97979.1| hypothetical protein VIBC2010_06329 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 297

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 13/214 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGG--KKIRSFLVTECASLFNVNHLTALRV 75
             + + + Q    +      + +  ++Y    G  K+ R+ L  + A  FN +H TAL +
Sbjct: 17  EAIAEQINQEIVKLCKNAGSKTVEQVKYHQRSGGSKR-RALLCYDTARSFNHSHQTALLL 75

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
             ++E +H  SLIHDD+   D    RR +  + ++     AI  G+ L+  A+  +    
Sbjct: 76  ACSVELLHNASLIHDDIQ--DQDMTRRDQAALWVKSSVAEAICVGDSLIAAAYMALGQLA 133

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
              +  I    +        +   + GQM DI       +    + K K   L+  + E 
Sbjct: 134 IFNEKLIPLVSLR-------VMQTIKGQMSDIGQGQFSRSSYTDVAKEKAAPLLRLSVEL 186

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +++A+ S    E+L    E   I +Q  DD+ D
Sbjct: 187 PSLLAN-SSIIGEKLAEAAELFAIAYQFNDDISD 219


>gi|225460953|ref|XP_002278023.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 298

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 18/177 (10%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD----NGYIRRGKPTVHIQ 110
             L      L       A+   +A+  +H  S  H+ +P  D    N   R G PT    
Sbjct: 81  PALCIAACELVGGRRELAIAAASALHLMHAASYFHEHIPLTDQPRANSPPRPG-PT---- 135

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS----QLMLSLTHNIGLQGMLGGQ--- 163
           +     ++ G+G++ +  E+++       D+  S    Q+++ LT  IG QG++ GQ   
Sbjct: 136 FGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRTIGSQGVVNGQYIQ 195

Query: 164 -MLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLG 218
              D     + +     I   K G  L       GAI+    + E E+LR +G   G
Sbjct: 196 AQCDESSPSVGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAG 252


>gi|62959225|gb|AAY23720.1| farnesyl diphosphate synthase [Prochlorococcus marinus str.
           CCMP1377]
          Length = 145

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 78/133 (58%), Gaps = 2/133 (1%)

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRGKPT HI + E TA++AG+ L   AF +++  +T     +R+++   L    G  GM 
Sbjct: 13  RRGKPTTHIAFGEATAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGMA 72

Query: 161 GGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           GGQM+D+  E        V  +Q++KTGAL+    E GAI+   ++  +  LR +  +LG
Sbjct: 73  GGQMMDLVAEHSTFNLQTVTRLQQLKTGALIAACVEIGAILGRVAEEGRTSLRGYAHDLG 132

Query: 219 IIFQLADDLLDCE 231
           + FQ+ADD+LD E
Sbjct: 133 LAFQIADDILDVE 145


>gi|195126086|ref|XP_002007505.1| GI12986 [Drosophila mojavensis]
 gi|193919114|gb|EDW17981.1| GI12986 [Drosophila mojavensis]
          Length = 337

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 17/212 (8%)

Query: 20  LDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGA 77
           L+ +L +T     Q + ++ LL    Y   + GK+ RS L         +      ++G 
Sbjct: 4   LNGILQKTKDKSTQREQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPPEKLTQIGE 63

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +      
Sbjct: 64  IVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYTLFLALEKVQQLGHP 121

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACES 195
               + ++ +L L    G++       +  +D F    E+   ++   KTG L   A   
Sbjct: 122 EATKVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRL 174

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             + +  ++ +  +L      LG+ FQ+ DD 
Sbjct: 175 MQLFSE-NKEDFTKLTAI---LGLYFQIRDDY 202


>gi|203284235|ref|YP_002221975.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly]
 gi|201083678|gb|ACH93269.1| octaprenyl-diphosphate synthase [Borrelia duttonii Ly]
          Length = 348

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 24/242 (9%)

Query: 6   PSKLQENSKRIDTIL----------DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS 55
            S L +  K I+ I           D  L  T +  ++  N     AI     GGK+IR 
Sbjct: 4   KSFLDKIEKNINNIFSKDYFLNLFTDKNLKLTLNIQESTINAIQAPAIEIINRGGKRIRP 63

Query: 56  FLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
            L+   A        +     ++   +E  H  SLI DD+   D    RRGKP++H+ Y 
Sbjct: 64  MLMILLAHALGYNNSDTENLYKISMLLELPHSGSLIIDDIE--DGALKRRGKPSIHLIYG 121

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQD 169
              +I   N +     ++I +   +    +    ++       L  +  GQ +D      
Sbjct: 122 LDNSINTANLIYFLPAKLIQTSNLKTSQKL----IIYENFFTTLSNLHLGQGIDITLHNG 177

Query: 170 EFI-DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +I    +   + + KT +L   A     I+ + ++N+ + L     N+G  FQ+ DD+ 
Sbjct: 178 TYIPSIEEYISLVEHKTSSLFGMAGFLAGILTN-NENKAKNLYNTFLNIGTYFQMIDDIK 236

Query: 229 DC 230
           + 
Sbjct: 237 NI 238


>gi|51598574|ref|YP_072762.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi]
 gi|51573145|gb|AAU07170.1| octaprenyl-diphosphate synthase [Borrelia garinii PBi]
          Length = 347

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFN---VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GG +IR  L+   A        N     ++   +E  H  SLI DD+   DN 
Sbjct: 50  AIEIINRGGDRIRPMLMILLAYALGLKEKNDRLIYKLSLLLELPHSGSLIIDDIE--DNS 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG+  +H+ Y    +I AGN +     ++I   ++ LK+N +  +  +    +    
Sbjct: 108 LKRRGRSAIHLIYGIDNSINAGNLIYFLPAKLI--ERSNLKENQKLLIYENYFTTLSNLH 165

Query: 159 MLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +  G  +   +E       +   + ++KT +L   A    AI+ +     K+    F   
Sbjct: 166 LGQGIDIKFHNESYIPSIKEYISLVELKTASLFGMASFLAAIITNNEDKAKKLYSTF-LK 224

Query: 217 LGIIFQLADDLLDC 230
           LG+ FQ+ DD+ + 
Sbjct: 225 LGVYFQIIDDIKNI 238


>gi|294786992|ref|ZP_06752246.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia
           denticolens F0305]
 gi|315226633|ref|ZP_07868421.1| bifunctional short chain isoprenyl diphosphate synthase
           [Parascardovia denticolens DSM 10105]
 gi|294485825|gb|EFG33459.1| putative geranylgeranyl pyrophosphate synthase [Parascardovia
           denticolens F0305]
 gi|315120765|gb|EFT83897.1| bifunctional short chain isoprenyl diphosphate synthase
           [Parascardovia denticolens DSM 10105]
          Length = 371

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 31/246 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL---LGGKKIRSFLVTECASLFNVNHLT- 71
           +   L + L +    +   H D L      AL    GGK++R+ L+        +     
Sbjct: 18  VSQNLREALFEGDFAVPVAHEDYLALLTDQALSSSRGGKRLRALLLCRTCQALRLPEEDW 77

Query: 72  --ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY------DEVTA------- 116
             A+ +  AIE     +L+HDD+  +D+  +RRG P+ H  +         TA       
Sbjct: 78  DAAIDLACAIEIFQTGALVHDDI--IDDSDLRRGAPSAHKAFASHLLKRSSTARQDGLGL 135

Query: 117 -IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
            ++ G+ L T + ++I    ++L      + ++        + +  GQ+LD+  E +D  
Sbjct: 136 GLMLGDLLATESVDLIQEASSRLSVPESLKSVIMTAFLTMHRQVEIGQVLDLSMETVDLH 195

Query: 176 Q-------VFMIQKMKTG-ALMCFACESGAIMAHASQNE-KERLRCFGENLGIIFQLADD 226
                          KT             +     Q    E  +  G  LG+ FQL DD
Sbjct: 196 DPASIEGGALATYVWKTASYTTIAPLRIAFLACGLDQETSHEVSQAVGLPLGVAFQLKDD 255

Query: 227 LLDCEE 232
           L+D   
Sbjct: 256 LIDVTG 261


>gi|326905223|gb|EGE52156.1| LOW QUALITY PROTEIN: polyprenyl synthetase idsB [Mycobacterium
           tuberculosis W-148]
          Length = 222

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 14/197 (7%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
           + I+++ + L      H+   + DR  +A       GK  R+ LV   A+    +   A 
Sbjct: 37  RAIESMREPLATMAGYHLGWWNADRSTAAGSS----GKYFRAALVYAAAAACGGDVGDAT 92

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V AA+E +H ++L+HDD+  MD    RRG+PTV   +    AI+ G+ L   A  I++ 
Sbjct: 93  PVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGGAILLGDALHATAVRILTG 150

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMC 190
              +       + +      +    +  GQ  D   E   E        +   KT AL  
Sbjct: 151 LTDECVAVRAIRRLQ-----MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTG 205

Query: 191 FACESGAIMAHASQNEK 207
             C  GA++A+A     
Sbjct: 206 CCCALGALVANADDATI 222


>gi|195492530|ref|XP_002094031.1| GE21608 [Drosophila yakuba]
 gi|194180132|gb|EDW93743.1| GE21608 [Drosophila yakuba]
          Length = 338

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 17/214 (7%)

Query: 18  TILDDLLLQT-ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRV 75
             L+ +L +T     Q + ++ LL    Y   + GK+ RS L         +      ++
Sbjct: 2   EELNSILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQI 61

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  ++ +H  SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +    
Sbjct: 62  GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLD 119

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFAC 193
                 + ++ +L L    G++       +  +D F    E+   ++   KTG L   A 
Sbjct: 120 HPEATKVYTEQLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAI 172

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + +  ++ +  +L      LG+ FQ+ DD 
Sbjct: 173 RLMQLFS-TNKEDYSKLTAI---LGLYFQIRDDY 202


>gi|157868092|ref|XP_001682599.1| polyprenyl synthase [Leishmania major strain Friedlin]
 gi|68126054|emb|CAJ07107.1| putative polyprenyl synthase [Leishmania major strain Friedlin]
          Length = 742

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 18/209 (8%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L   +R  +  GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQ-- 490

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG   VH++Y   TAI AG+      F    + + Q     ++  +  L  ++ 
Sbjct: 491 DNSVVRRGGKCVHVEYGVATAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVL 547

Query: 156 LQGMLGGQMLDIQDEFIDE------------TQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L G  G  +   + +++                +  I   KTG  +   C    ++  A 
Sbjct: 548 LAGHAGQGLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAP 607

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
               E +  FG  LG+ FQ+ DD L+   
Sbjct: 608 TVLSEAVERFGLALGLAFQIVDDALNIRG 636


>gi|146084366|ref|XP_001464985.1| polyprenyl synthase [Leishmania infantum JPCM5]
          Length = 742

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 19/230 (8%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
           ++ +L    +   +       + L   +R  +  GGK  RS ++  C +  +  +    R
Sbjct: 413 VENVLGRYAMNRGAPADKIC-ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRR 471

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
             A  E +H  SLI DD+   DN  +RRG   VH++Y   TAI AG+      F    + 
Sbjct: 472 YIAVAELLHVGSLIIDDIQ--DNSVVRRGGKCVHVEYGVPTAINAGSACY---FMGPRAA 526

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE------------TQVFMIQK 182
           + Q     ++  +  L  ++ L G  G  +   + +++                +  I  
Sbjct: 527 RIQDLPPEKASRIYQLYFDVLLAGHAGQGLDIYRLDYLMPKVVETGDASTLFDALDAIHT 586

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            KTG  +   C    ++  A     E +  FG  LG+ FQ+ DD L+   
Sbjct: 587 YKTGGAVGALCSMACVLCEAPTVLSEAVERFGLALGLAFQIVDDALNIRG 636


>gi|295835333|ref|ZP_06822266.1| polyprenyl synthetase [Streptomyces sp. SPB74]
 gi|197696404|gb|EDY43337.1| polyprenyl synthetase [Streptomyces sp. SPB74]
          Length = 390

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 17/228 (7%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSA----IRYALLGGKK-IRSFLVTECASLFNVNHLT 71
           DT +           + +   RL +A    +R+ +  G++  R  LV     L   +   
Sbjct: 51  DTWIPARAAALDPATRARLAPRLHAALAVPVRHLVDAGRRRWRPGLVAAAIDLLGGDSEH 110

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN---GLLTYAF 128
              + AAIE  H  SL+ DD+   D   +RRG P  H+ +   TA+ AG         A 
Sbjct: 111 YGPLCAAIELAHTGSLMVDDVQ--DGSPLRRGSPAAHLVFGTATALNAGTHAYFAFDRAV 168

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGM-LGGQMLDIQDEFID------ETQVFMIQ 181
            + ++    L   +R   + +L      QG+ + G   ++ +             V +  
Sbjct: 169 RLTAAHDPALAGRLRDVFLAALRSAHAGQGLDITGHRAEMAEAVATGDARHVLALVRLTH 228

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++KTGA+    CE+ A++  A    +  L  FGE LG  +Q  DD+ D
Sbjct: 229 RLKTGAMAALGCETAALVTAADGPRRRALAAFGEALGTAYQFTDDVAD 276


>gi|55792579|gb|AAV65383.1| plastid geranylgeranyl diphosphate synthase [Prototheca
           wickerhamii]
          Length = 195

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGG-KKIRSFLVTEC 61
                 + + +  +D  LD            Q+ +RL SA+RY+LLGG K++R  L    
Sbjct: 72  FDFRVYMSQRAALVDAALD-------VAAPLQYPERLHSAMRYSLLGGGKRVRPALCLAA 124

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             L       A+    A+E IH  SLIHDDLP+MD+  +RRG+P  H  + E  AI+AG+
Sbjct: 125 CELVGGCLEVAMPAACAVEMIHTMSLIHDDLPAMDDDDVRRGQPANHRAFGEDIAILAGD 184

Query: 122 GLLTYAFEIIS 132
            LL  AFE ++
Sbjct: 185 ALLALAFEHVA 195


>gi|158286675|ref|XP_308860.3| AGAP006894-PA [Anopheles gambiae str. PEST]
 gi|157020582|gb|EAA03964.3| AGAP006894-PA [Anopheles gambiae str. PEST]
          Length = 324

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 16/203 (7%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
               Q + ++ LL    Y   + GK++RS L        ++ +     +   ++ +H  S
Sbjct: 15  DKSSQKEQDETLLQPFSYIQQIPGKQVRSKLALAINHWLHIPNDKLAAISEIVQMLHNSS 74

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+   DN  +RRG P  H  Y   + I A N +L  A E +          + ++ 
Sbjct: 75  LLIDDIE--DNSILRRGIPVAHKIYGVASTINAANYVLFLALEKVQQLGHPDATRVYTEQ 132

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +L L    G++       +  +D +    ET+   +   KTG L   A     + +  ++
Sbjct: 133 LLELHRGQGME-------IYWRDNYACPTETEYKQMTIRKTGGLFMLAIRLMQLFSE-NR 184

Query: 205 NEKERLRCFGENLGIIFQLADDL 227
            +  +L      LG+ FQ+ DD 
Sbjct: 185 KDFTKLTAI---LGLYFQIRDDY 204


>gi|23308797|ref|NP_599861.2| geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
 gi|21323391|dbj|BAB98019.1| Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 382

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 30/239 (12%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLFNVNHL----TALRVGAA 78
           L Q  S  Q +    L +A + AL GGK IR   L+    +L + +      T L+V  A
Sbjct: 44  LSQQCSTYQPEFRTCLDAAFQ-ALRGGKLIRPRMLLGLYNTLVDDDIEVKLNTVLQVAVA 102

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTV---------------------HIQYDEVTAI 117
           +E +H   L+HDD+  +D    RRGK                        H+ + +   +
Sbjct: 103 LELLHFSLLVHDDV--IDGDLYRRGKLNFIGQILMHRTPESFAQIQRDPEHLDWAQSNGL 160

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + GN  L    +I +         +R   +L+ T N  + G      L  +    +    
Sbjct: 161 LMGNLFLAATHQIFARLDLPHHQRVRLLDLLNHTINDTIVGEFLDVGLSSKAISPNMDIA 220

Query: 178 FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + ++KT          + AI+A   Q  + ++   G NLGI +QL DD L    D  
Sbjct: 221 LEMSRLKTATYTFELPMRAAAILAELPQEIETKIGEIGTNLGIAYQLQDDYLSTFGDAA 279


>gi|30795079|ref|NP_851529.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           rochei]
 gi|30698452|dbj|BAC76565.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           rochei]
          Length = 439

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 30/242 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH----LT 71
           +D  L + L +  +       D      R+ L GGK+ R+ L    +             
Sbjct: 72  LDEALAERLRRARTADPLFARDVAERMTRFTLEGGKRTRAQLAWWASRACAGRDAAVAAA 131

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYDEVT 115
           AL++GAA+E +   +L+HDD+  MD   +RRG+PT+H                 ++ +  
Sbjct: 132 ALQIGAALELLQTCALVHDDV--MDRATLRRGRPTLHTELASGHEDRVGPERARRFGQSA 189

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--- 172
           A++AG+  L +A ++++     +   +  + + S         M+ GQ LD+  +     
Sbjct: 190 AVLAGDLALAWADDLVAETPLAVWKAVVVRRLWSDMRT----EMVAGQYLDLHGQATAAR 245

Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              +      +K+    +      GA +A A      RL   G   G+ FQL DDL D  
Sbjct: 246 SLARALRAACLKSALYSVERPLALGAAVAGADDVTLRRLCDAGRCAGMAFQLRDDLDDVF 305

Query: 232 ED 233
            D
Sbjct: 306 GD 307


>gi|283458392|ref|YP_003363016.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
 gi|283134431|dbj|BAI65196.1| geranylgeranyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
          Length = 410

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 98/279 (35%), Gaps = 56/279 (20%)

Query: 4   GLPSKLQENSKR----IDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFL 57
            L  ++ E  +      DT++ +   +    ++    +   LL AI     GGK++R+ L
Sbjct: 31  HLAERIAEEQRAYLHAFDTLMAEFFARQRELLEGISAETLPLLEAIESLSTGGKRLRALL 90

Query: 58  VTECASLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
                       +T        ++ G A+E     +LIHDD+  +D    RRG P+VH +
Sbjct: 91  SYWGWRGAGGAPVTENRASWSIVKAGMAVELFQTSALIHDDI--IDRSDTRRGAPSVHKR 148

Query: 111 ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
                           Y     I+AG+  L ++ E+ +S          ++ +       
Sbjct: 149 FEAAHEQNSWRGDAFNYGLTGGILAGDLTLAWSAEVFASLGEGAIYGAPARTIFDRMRT- 207

Query: 155 GLQGMLGGQMLDIQDEFIDETQ----VFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
               +L GQ LD+  E ++       +     +       ++CE    +  A   +   L
Sbjct: 208 ---EVLAGQYLDVYSEVLETEDAQAALQRALNVIRFKSAKYSCEHPFTIGGALALQATAL 264

Query: 211 -----------------RCFGENLGIIFQLADDLLDCEE 232
                            R FG  LG  FQL DD L    
Sbjct: 265 ENGTGAVSEQHPVLAGYRAFGLPLGEGFQLRDDELGVFG 303


>gi|322498420|emb|CBZ33493.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 742

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 18/209 (8%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L   +R  +  GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQ-- 490

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG   VH++Y   TAI AG+      F    + + Q     ++  +  L  ++ 
Sbjct: 491 DNSVVRRGGKCVHVEYGVPTAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVL 547

Query: 156 LQGMLGGQMLDIQDEFIDE------------TQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L G  G  +   + +++                +  I   KTG  +   C    ++  A 
Sbjct: 548 LAGHAGQGLDIYRLDYLMPKVVESGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAP 607

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
               E +  FG  LG+ FQ+ DD L+   
Sbjct: 608 TVLSEAVERFGLALGLAFQIVDDALNIRG 636


>gi|2944400|gb|AAC05273.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster]
          Length = 338

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 16/204 (7%)

Query: 27  TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                Q + ++ LL    Y   + GK+ RS L         +      ++G  ++ +H  
Sbjct: 12  KDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNS 71

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +          + ++
Sbjct: 72  SLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTE 129

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +L L    G++       +  +D F    E+   ++   KTG L   A     + + ++
Sbjct: 130 QLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS-SN 181

Query: 204 QNEKERLRCFGENLGIIFQLADDL 227
           + +  +L      LG+ FQ+ DD 
Sbjct: 182 KEDYSKLTAI---LGLYFQIRDDY 202


>gi|195338147|ref|XP_002035687.1| GM14833 [Drosophila sechellia]
 gi|195588444|ref|XP_002083968.1| GD14008 [Drosophila simulans]
 gi|194128780|gb|EDW50823.1| GM14833 [Drosophila sechellia]
 gi|194195977|gb|EDX09553.1| GD14008 [Drosophila simulans]
          Length = 338

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 16/204 (7%)

Query: 27  TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                Q + ++ LL    Y   + GK+ RS L         +      ++G  ++ +H  
Sbjct: 12  KDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNS 71

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +          + ++
Sbjct: 72  SLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTE 129

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +L L    G++       +  +D F    E+   ++   KTG L   A     + + ++
Sbjct: 130 QLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS-SN 181

Query: 204 QNEKERLRCFGENLGIIFQLADDL 227
           + +  +L      LG+ FQ+ DD 
Sbjct: 182 KEDYSKLTAI---LGLYFQIRDDY 202


>gi|24660002|ref|NP_523958.2| quemao, isoform A [Drosophila melanogaster]
 gi|281365769|ref|NP_001163370.1| quemao, isoform B [Drosophila melanogaster]
 gi|7295252|gb|AAF50574.1| quemao, isoform A [Drosophila melanogaster]
 gi|17946375|gb|AAL49221.1| RE65121p [Drosophila melanogaster]
 gi|272455081|gb|ACZ94641.1| quemao, isoform B [Drosophila melanogaster]
          Length = 338

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 16/204 (7%)

Query: 27  TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                Q + ++ LL    Y   + GK+ RS L         +      ++G  ++ +H  
Sbjct: 12  KDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNS 71

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   DN  +RRG P  H  Y   + I A N  L  A E +          + ++
Sbjct: 72  SLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTE 129

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +L L    G++       +  +D F    E+   ++   KTG L   A     + + ++
Sbjct: 130 QLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS-SN 181

Query: 204 QNEKERLRCFGENLGIIFQLADDL 227
           + +  +L      LG+ FQ+ DD 
Sbjct: 182 KEDYSKLTAI---LGLYFQIRDDY 202


>gi|329946884|ref|ZP_08294296.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328526695|gb|EGF53708.1| polyprenyl synthetase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 386

 Score =  115 bits (288), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 62/276 (22%), Positives = 100/276 (36%), Gaps = 48/276 (17%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTE 60
             LP+ L      ++  L+++L       +   Q    LL A    L GGK++R+ L   
Sbjct: 2   SALPAALSRVRPAVEHRLEEVLAGCHRRWEELEQAAPELLKAADSVLGGGKRMRAVLGAV 61

Query: 61  CASLFNVNHLT--------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY- 111
             ++ +             A+ +GAA+E     +L+HDDL  MD    RRG P  H  + 
Sbjct: 62  GCTILSAPEHRNKELTGASAVHLGAALELYQASALVHDDL--MDGASTRRGLPAAHHAFA 119

Query: 112 ---------------DEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHN 153
                              AI+ G+ LL+ A E    ++   T       +        +
Sbjct: 120 WEHETRGWLGHSRAFGSNGAILLGDLLLSLAGEEMSALAQAHTSSGCGDEAVGHARAAFD 179

Query: 154 IGLQGMLGGQMLDIQDEFIDE--------------TQVFMIQKMKTG-ALMCFACESGAI 198
                +  GQ LD++ E +                     + + K+    +      GA+
Sbjct: 180 AMTTEVALGQYLDVRSENLPLPWGQDPAAAAQRMRDDALSVVRHKSARYSVRHPLLIGAL 239

Query: 199 MAH--ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +A    S    + L  FGE +GI FQL DD L    
Sbjct: 240 LAGMAPSSPTAKHLAEFGEEIGIAFQLRDDELGVFG 275


>gi|23465984|ref|NP_696587.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum NCC2705]
 gi|23326700|gb|AAN25223.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [includes: farnesyl pyrophosphate synthetase (Fpp
           synthetase) (dimethylallyltransferase);
           geranyltranstransferase ] [Bifidobacterium longum
           NCC2705]
          Length = 372

 Score =  115 bits (288), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 19  NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFD 78

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRGKP+ H   ++     
Sbjct: 79  ILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGKPSAHHALEQAVHSG 136

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 137 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 196

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 197 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 256

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 257 DDLLDVVG 264


>gi|321399323|emb|CAM67227.2| putative polyprenyl synthase [Leishmania infantum JPCM5]
          Length = 742

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 18/209 (8%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + L   +R  +  GGK  RS ++  C +  +  +    R  A  E +H  SLI DD+   
Sbjct: 433 ETLFRPVRSIIDRGGKSWRSLILVSCCNALSRQYFDCRRYIAVAELLHVGSLIIDDIQ-- 490

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG   VH++Y   TAI AG+      F    + + Q     ++  +  L  ++ 
Sbjct: 491 DNSVVRRGGKCVHVEYGVPTAINAGSACY---FMGPRAARIQDLPPEKASRIYQLYFDVL 547

Query: 156 LQGMLGGQMLDIQDEFIDE------------TQVFMIQKMKTGALMCFACESGAIMAHAS 203
           L G  G  +   + +++                +  I   KTG  +   C    ++  A 
Sbjct: 548 LAGHAGQGLDIYRLDYLMPKVVETGDASTLFDALDAIHTYKTGGAVGALCSMACVLCEAP 607

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
               E +  FG  LG+ FQ+ DD L+   
Sbjct: 608 TVLSEAVERFGLALGLAFQIVDDALNIRG 636


>gi|325001247|ref|ZP_08122359.1| geranylgeranyl pyrophosphate synthase [Pseudonocardia sp. P1]
          Length = 383

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 98/245 (40%), Gaps = 28/245 (11%)

Query: 10  QENSKRIDTILDD-LLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNV 67
           +E   R+   +++ +  + A H+ +      L+ +    +G GK +RS            
Sbjct: 33  EEVRGRVRDRVEETVRRRCAEHVHSMEGAEFLAGVLTDFVGRGKYLRSMFGYLGWRAAAP 92

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QY 111
           +   AL   A +E +H ++L+ DD+  MD   +RRG+PTVH+                ++
Sbjct: 93  DSPAALDAVAGLELLHAFALLQDDV--MDGSLLRRGRPTVHVQLAAWHRGQGMSGCPDRF 150

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
            E  A++ G+  L +A + +           R         +     +  GQ  D+ +E 
Sbjct: 151 GESGAVLLGDLCLVWAEQAMRESGLPRDALDRGWPRYDAMRS----ELAVGQFADLLNEA 206

Query: 172 I---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                  +V  + + K+G   +    E GA MA    +    L  +G  +G  FQ+ DD+
Sbjct: 207 RRVPTLDEVMDVLRRKSGNYTVRRPLELGAAMAGGGDDLVALLGDYGTMVGEAFQMRDDV 266

Query: 228 LDCEE 232
           L    
Sbjct: 267 LGVFG 271


>gi|118465792|ref|YP_883046.1| polyprenyl synthetase [Mycobacterium avium 104]
 gi|118167079|gb|ABK67976.1| polyprenyl synthetase [Mycobacterium avium 104]
          Length = 392

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 20/203 (9%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           + GGK +RS  V             ALR  A+ E +H ++L+ DD+  MD    RRG+P 
Sbjct: 86  VSGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDV--MDGAQERRGRPA 143

Query: 107 VH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
            H                 ++ E  AI+ G+  L +A +++     + +   R+      
Sbjct: 144 AHLQFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAFPRYDA 203

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER 209
                  G       DI+ +      V  + + K+G   +    E GA MA        R
Sbjct: 204 MRVELAVGQFADLTNDIR-QSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVAR 262

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
           L  +G  +G  FQL DD+L    
Sbjct: 263 LSRYGAAVGEAFQLRDDVLGVFG 285


>gi|62389517|ref|YP_224919.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41324851|emb|CAF19333.1| geranylgeranyl-pyrophosphate sythase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 372

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 30/239 (12%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRS-FLVTECASLFNVNHL----TALRVGAA 78
           L Q  S  Q +    L +A + AL GGK IR   L+    +L + +      T L+V  A
Sbjct: 34  LSQQCSTYQPEFRTCLDAAFQ-ALRGGKLIRPRMLLGLYNTLVDDDIEVKLNTVLQVAVA 92

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTV---------------------HIQYDEVTAI 117
           +E +H   L+HDD+  +D    RRGK                        H+ + +   +
Sbjct: 93  LELLHFSLLVHDDV--IDGDLYRRGKLNFIGQILMHRTPESFAQIQRDPEHLDWAQSNGL 150

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + GN  L    +I +         +R   +L+ T N  + G      L  +    +    
Sbjct: 151 LMGNLFLAATHQIFARLDLPHHQRVRLLDLLNHTINDTIVGEFLDVGLSSKAISPNMDIA 210

Query: 178 FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             + ++KT          + AI+A   Q  + ++   G NLGI +QL DD L    D  
Sbjct: 211 LEMSRLKTATYTFELPMRAAAILAELPQEIETKIGEIGTNLGIAYQLQDDYLSTFGDAA 269


>gi|330469324|ref|YP_004407067.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
 gi|328812295|gb|AEB46467.1| polyprenyl synthetase [Verrucosispora maris AB-18-032]
          Length = 342

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 88/241 (36%), Gaps = 30/241 (12%)

Query: 17  DTILDDLLLQTASHMQTQHND--RLLSAIR-YALLGGKKIRSFLVTECAS-LFNVNHLTA 72
           D  L D L      M    +    +  AI  + L GGK++R             V+    
Sbjct: 2   DQALSDFLAGRRLWMTDLDDALVPVAEAIEAFVLGGGKRLRPAFAYWGYRGAGGVDTDAV 61

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTA 116
           +   AA+E +   +LIHDDL  MD    RRG+P VH +                + +  A
Sbjct: 62  VTALAALEFVQASALIHDDL--MDRSDTRRGEPAVHRRFAARHRAAGWGGNPDGFGDAAA 119

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           I+ G+  L ++ E++ S     +   R++                GQ LD+  +   +  
Sbjct: 120 ILLGDLCLVWSDELLHSAGLDPRTVARARPDFDEMRTEVTV----GQYLDVVTQATGDAS 175

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKE----RLRCFGENLGIIFQLADDLLDCEE 232
           +    K+       +  E   ++  A  +           +G  LG  FQL DD+L    
Sbjct: 176 LERASKIARYKSAKYTVERPLLLGAALADAPADIRVAYSAYGLPLGEAFQLRDDVLGVFG 235

Query: 233 D 233
           D
Sbjct: 236 D 236


>gi|227873691|ref|ZP_03991924.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268]
 gi|227840459|gb|EEJ50856.1| possible dimethylallyltranstransferase [Oribacterium sinus F0268]
          Length = 161

 Score =  114 bits (287), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTE 60
           N  +    Q+  + ++ IL   L +     +T      + A+ Y+L+ GGK+IR  L+ E
Sbjct: 26  NHSVEEGFQKRREEVEAILTTFLPEEKGPAKTG-----IEAMNYSLMVGGKRIRPILLRE 80

Query: 61  CASLFNVNHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              LF       L          A+E IH +SL HDDLP+MDN   RRGK     ++ E 
Sbjct: 81  AFLLFAGEERQKLFLPLTEAFMLAMEMIHSFSLCHDDLPAMDNDKYRRGKEATWYRFTEA 140

Query: 115 TAIIAGNGLLTYAFEIISS 133
             I+AG+ L  YAF+ +  
Sbjct: 141 QGILAGDSLSLYAFQWVLE 159


>gi|328949593|ref|YP_004366928.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328449917|gb|AEB10818.1| Polyprenyl synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 327

 Score =  114 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 10/223 (4%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIR----YALLGGKKIRSFLVTECASLFNVNHLTAL 73
             +   LL+     +      L    +    Y   GGK +R  L+   A         AL
Sbjct: 3   EAIRRYLLERLPDPKAAPRPELAQYAQLLRDYPERGGKLLRGQLLLATAQAHGAPPERAL 62

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              AA+E    + LIHDD+   D   +RRG+PT+H  Y    A+ AG+ L    + ++  
Sbjct: 63  PAAAALELFQNWVLIHDDIE--DASEMRRGRPTLHRLYSVPLALNAGDALHAVMWRVLLE 120

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   +  +    +      Q +    +   + +   E  + M+++           
Sbjct: 121 AAYPTP--VLQEFARLVETTARGQHLDLAWIEAERFDLSPEDYLEMVRQKAAYYTAVAPL 178

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + GA++A  + +        G  LG+ FQ+ DD+L+ E +  K
Sbjct: 179 KLGALVAGHTPH--PAFEPAGLQLGVAFQIIDDVLNLEGNPDK 219


>gi|221132081|ref|XP_002160031.1| PREDICTED: similar to farnesyl diphosphate synthase (farnesyl
           pyrophosphate synthetase, dimethylallyltranstransferase,
           geranyltranstransferase) [Hydra magnipapillata]
          Length = 477

 Score =  114 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 95/257 (36%), Gaps = 33/257 (12%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTA-----SHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
            L S++    ++ D I ++++ +       +   T+    L  A+ Y    GKK R  +V
Sbjct: 131 DLSSRILVYQEKFDLIFENIIKELVEVDAQNPQITEAAHSLRDALSYNAFDGKKSRGMMV 190

Query: 59  TECASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                        N     AL +G  +E +    L+ DD+  MD   IRRGKP  + +  
Sbjct: 191 ICSLDFLKNGNVTNSEVDKALCLGWCVEILQAVFLVADDI--MDRSEIRRGKPCWYKKCG 248

Query: 113 EVTAIIAGNGLLTYAFEIISS----PKTQLKDNIRSQLMLSLTHNIG--LQGMLGGQMLD 166
              AI     L+      +       +  L D  +S   ++    +G  L  +      +
Sbjct: 249 LR-AIN-DTYLMEQCIYALIDKHFMNEPYLVDLYKSFHRITYLTAMGQELDMLASEPNGN 306

Query: 167 IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGE------NLGI 219
                  E +   I K KT           G I+A+      + ++ + E       LG 
Sbjct: 307 FTIRNFTEDKYKSIVKYKTAYYSFYLPVSLGMILAN-----IKDMKLYAEVENILMKLGE 361

Query: 220 IFQLADDLLDCEEDLPK 236
           +FQ+ DD LDC  D  K
Sbjct: 362 LFQIQDDYLDCYGDPAK 378


>gi|89074633|ref|ZP_01161098.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium
           sp. SKA34]
 gi|89049571|gb|EAR55131.1| Dimethylallyltransferase; Geranyltranstransferase [Photobacterium
           sp. SKA34]
          Length = 298

 Score =  114 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 15/220 (6%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR 74
               ++ L+ +   H         LS +RY    GG + R+ +    A    +N  TA  
Sbjct: 19  FSQEINQLMFELCKHSGPVT----LSYLRYHQQSGGSQRRAKICYITAVSLGLNTNTAKL 74

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +   +E +H  SLIHDD+   D    RRG+  + ++     AI  G+ L+  A+  +S  
Sbjct: 75  LAVTVELLHNASLIHDDVQ--DKDRQRRGQDALWVKASVEEAICLGDTLIIAAYHALSKI 132

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FIDETQVFMIQKMKTGALMCFAC 193
            T    ++++      T    +   + GQM D+  +  + E    +I   K   L+  + 
Sbjct: 133 NTPANSHLQA------TVCRRVMETIRGQMEDLSPQLPLTEQSYTLIATNKAAPLLSLSV 186

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           E  A++A    +  + L     +  + +Q  DDL D  +D
Sbjct: 187 ELPALLAG-EPSLAKALSNAASSFALAYQFYDDLCDQAQD 225


>gi|170119528|ref|XP_001890894.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164634032|gb|EDQ98458.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 240

 Score =  114 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 23/154 (14%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+HDD+  +D   +RRG P+   ++    +++ GN +L  A   ++     L D
Sbjct: 1   MLHTASLLHDDV--IDASPLRRGAPSAPSKFGSKLSVLGGNFILGRASTALAR----LGD 54

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
              +QL+ S+  N     ++ G++L ++D+            +KT +LM     S  ++ 
Sbjct: 55  AEVTQLIASVISN-----LVEGEILQMRDKT----------YLKTASLMAKGARSAVVLG 99

Query: 201 HASQNEK--ERLRCFGENLGIIFQLADDLLDCEE 232
              + E   +    +G N+GI FQL DD+LD E 
Sbjct: 100 GCEEGEVWKDIAYAYGRNVGIAFQLIDDILDYES 133


>gi|149918648|ref|ZP_01907136.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
 gi|149820489|gb|EDM79903.1| Polyprenyl synthetase [Plesiocystis pacifica SIR-1]
          Length = 388

 Score =  114 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 15/223 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVG 76
           D +L+ +  + A   Q    D     + Y L   K +R  L    A     +   AL   
Sbjct: 20  DEVLEHI--EAAIGAQPALEDLRAPLLDYPLRAAKGLRPALCVAAARALGASRSAALPSA 77

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS--- 133
           AA+E +H   LIHDD+   D    RRG+PT+  +Y + TA+  G+ +L  A   +     
Sbjct: 78  AALELLHNAFLIHDDVE--DESLARRGEPTLQRRYGQATAMNMGDAMLALALGPLLDNTG 135

Query: 134 -----PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-A 187
                P  ++ D +R  ++++          +     D   ++        +   KT   
Sbjct: 136 VIGLGPALEVLDLVRETVVVTAAGQARELEWIRQGRWDFGSDYA--AAYEALVVAKTAHY 193

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                   GA +A    + + +L  +  ++G+ FQ+ DDLL+ 
Sbjct: 194 SFITPVVVGATIAEVRGDARAQLAAYARHVGVAFQITDDLLNL 236


>gi|41409167|ref|NP_962003.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397987|gb|AAS05617.1| IdsA2_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 382

 Score =  114 bits (286), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 20/203 (9%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           + GGK +RS  V             ALR  A+ E +H ++L+ DD+  MD    RRG+P 
Sbjct: 76  VSGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDV--MDGAQERRGRPA 133

Query: 107 VH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
            H                 ++ E  AI+ G+  L +A +++     + +   R+      
Sbjct: 134 AHLQFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAWPRYDA 193

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER 209
                  G       DI+ +      V  + + K+G   +    E GA MA        R
Sbjct: 194 MRVELAVGQFADLTNDIR-QSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVAR 252

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
           L  +G  +G  FQL DD+L    
Sbjct: 253 LSRYGAAVGEAFQLRDDVLGVFG 275


>gi|317482452|ref|ZP_07941469.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916112|gb|EFV37517.1| polyprenyl synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 360

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 7   NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQASSSSQGGKRLRALLALDAFD 66

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRGKP+ H   ++     
Sbjct: 67  ILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGKPSAHHALEQAVHSG 124

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 245 DDLLDVVG 252


>gi|325190513|emb|CCA25012.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14]
          Length = 345

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 29/254 (11%)

Query: 6   PSKLQENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            S+ +E  +    + DD+L  L+    M     + +   + Y  LGGK  R  LV ECA 
Sbjct: 3   ASEREEFIQLFHELKDDVLQILEQDLDMPQDAIEWIREVMEYNCLGGKLNRGLLVVECAK 62

Query: 64  -LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EVTA 116
            LF           A  +G  IE +  + LI DD+  MDN  +RRG+   +     E+TA
Sbjct: 63  SLFGEELSPEIKRKANILGWCIELVQAFFLIADDI--MDNSLMRRGQICWYKLPKVELTA 120

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---- 172
           +     + ++ F I+   +   ++ I    ++ L  +  +     GQ+LD+  + +    
Sbjct: 121 VNDAFLMESFVFRIL---RLHFRNEITYTDIIHLFQDT-IHRTEMGQLLDLTSQPLNAPS 176

Query: 173 -----DETQVFMIQKMKTGALMCFACESGAIM--AHASQNEKERLRCFGENLGIIFQLAD 225
                   +   I + KT     +   + A++      +   +  +     +G  FQ+ D
Sbjct: 177 DLSRFTVERYRKIVRYKTAYYTFYLPLACAMLLRGILDEPSHQVAQDICMEIGEYFQIQD 236

Query: 226 DLLDCEED---LPK 236
           D LDC  D   L K
Sbjct: 237 DFLDCFGDENVLGK 250


>gi|296454314|ref|YP_003661457.1| polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301]
 gi|296183745|gb|ADH00627.1| Polyprenyl synthetase [Bifidobacterium longum subsp. longum JDM301]
          Length = 360

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 100/253 (39%), Gaps = 39/253 (15%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 7   NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQASSSSQGGKRLRALLALDAFD 66

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRGKP+ H   ++     
Sbjct: 67  ILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGKPSAHRALEQAVHSG 124

Query: 119 A---------GNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           A         G+ L T   EI     ++L + N  ++  L++   + +     GQ+LD+ 
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTNALNEAFLTMQREVEI-----GQILDLA 179

Query: 169 DEFIDETQ-------VFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGI 219
            E    +           + + KT             + A  S ++        G  LG+
Sbjct: 180 VEMTPLSDPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGL 239

Query: 220 IFQLADDLLDCEE 232
            FQLADDLLD   
Sbjct: 240 AFQLADDLLDVVG 252


>gi|312132590|ref|YP_003999929.1| ispa [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773533|gb|ADQ03021.1| IspA [Bifidobacterium longum subsp. longum BBMN68]
          Length = 360

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 7   NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFD 66

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRGKP+ H   ++     
Sbjct: 67  ILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGKPSAHHALEQAVHSG 124

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 245 DDLLDVVG 252


>gi|294669816|ref|ZP_06734875.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308209|gb|EFE49452.1| hypothetical protein NEIELOOT_01709 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 122

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTE 60
              L +   +   + + +L  L+       + Q    L   +RYA L GGK++R  LV  
Sbjct: 3   TNELKTWQAQAQAQTELLLARLMPS-----ENQLPQSLHETMRYAALDGGKRLRPLLVLA 57

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
            + L            AAIE IH YSL+HDD+P+MDN  +RRG+PT HI+Y E
Sbjct: 58  ASELGEAVPDAVEAAMAAIELIHVYSLVHDDMPAMDNDSLRRGRPTCHIRYGE 110


>gi|227547664|ref|ZP_03977713.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|227211919|gb|EEI79815.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum subsp. infantis ATCC 55813]
          Length = 360

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 7   NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFD 66

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRGKP+ H   ++     
Sbjct: 67  VLAGDVTPDWRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGKPSAHHALEQAVHSG 124

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 245 DDLLDVVG 252


>gi|322691366|ref|YP_004220936.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456222|dbj|BAJ66844.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 360

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 7   NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFD 66

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRGKP+ H   ++     
Sbjct: 67  ILAGDVTPDWRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGKPSAHHALEQAVHSG 124

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 245 DDLLDVVG 252


>gi|301166557|emb|CBW26133.1| geranyltranstransferase [Bacteriovorax marinus SJ]
          Length = 311

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 18/222 (8%)

Query: 20  LDDLLLQTASHMQTQHNDR-LLSAIRYALLG-GKKIRSFLVTECA---------SLFNVN 68
           +  ++    +H++            RY +L  GK  R  LV+                  
Sbjct: 3   VAQIIRNIETHLELVIPKHNFSEVYRYGVLPPGKAFRPQLVSAIYADYCNESDHKFLEDP 62

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 + +A+E  H Y+L+HDDLPSMD+   RRGKP  HI+++E  A++AG+GL T +F
Sbjct: 63  KTPVNYLASAVEVHHAYTLLHDDLPSMDDDDTRRGKPATHIKFNEWKALLAGDGLQTASF 122

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-DETQVFMIQKMKTGA 187
            +++             ++   +  +G +G++ GQ LD+ +E      ++ +  + KT  
Sbjct: 123 ALLAKYG----HKNLGLILKFFSWALGPKGLIQGQYLDLSEEMTKGIDELILTHQYKTAR 178

Query: 188 LMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDL 227
           L+  +   G   + A+ + +  ++L   G ++G++FQL DDL
Sbjct: 179 LIQTSILLGYWSSSATTDYRTSKQLFRLGHSVGVVFQLLDDL 220


>gi|14625008|dbj|BAB61884.1| farnesyl diphosphate synthase [Bradyrhizobium japonicum]
          Length = 147

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDDLP MD+  +RRG PTVH+++ E TAI+ G+ L  +AF  ++S        I    + 
Sbjct: 1   HDDLPCMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLNAPGDSPIAL--VR 58

Query: 149 SLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L   +  +G  GGQ +D+    + ++  ++  + +MK+GAL+  +   GA+ A      
Sbjct: 59  ELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAVGVNAA 118

Query: 207 KERLRC----FGENLGIIFQLADDLLDCE 231
              L C    +    G+  Q+ DD+LD E
Sbjct: 119 HAALYCALDHYSACFGLALQVIDDILDAE 147


>gi|327286120|ref|XP_003227779.1| PREDICTED: farnesyl pyrophosphate synthase-like [Anolis
           carolinensis]
          Length = 351

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 86/232 (37%), Gaps = 21/232 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-LVTECASLFNVNHLT--- 71
           +  +++D L Q      ++   RL   + Y  +GGK  R   +V+    L          
Sbjct: 25  VKDLIEDELHQKDV---SEAFSRLKEVVEYNAIGGKYNRGLTVVSAFGELAGPEQQDPKN 81

Query: 72  ---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A+ VG  +E +  + L+ DD+  MD    RRG P  + +     A +  + LL  + 
Sbjct: 82  FQHAMVVGWCVELLQAFFLVADDI--MDGSLTRRGHPCWYKKEGVGLAAVNDSLLLESSI 139

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKM 183
             +   K   +       +L L      Q  LG  +  I    +D     E +   I K 
Sbjct: 140 YRL--LKRHCRGQPYYLNLLELFLQSAYQTELGQTLDLISAPPVDLDSFTEERYKAIVKY 197

Query: 184 KTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT          +   MA   S+ E    R     +G  FQ+ DD LDC  D
Sbjct: 198 KTAFYSFYLPVAAAMYMAGIDSEEEHSHARTILLEMGEFFQIQDDYLDCFGD 249


>gi|227875512|ref|ZP_03993652.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC
           35243]
 gi|306818821|ref|ZP_07452543.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239]
 gi|227843848|gb|EEJ54017.1| geranylgeranyl pyrophosphate synthase [Mobiluncus mulieris ATCC
           35243]
 gi|304648507|gb|EFM45810.1| possible dimethylallyltransferase [Mobiluncus mulieris ATCC 35239]
          Length = 360

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 75/211 (35%), Gaps = 29/211 (13%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIR 101
           LL GK+ R+                 +      +G  +E     +++HDD+  +D   IR
Sbjct: 47  LLRGKRFRAIGAYIGWIASGGTVSPQIPGCLLDLGTCLELFQASAIVHDDI--IDEARIR 104

Query: 102 RGKPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           RG P+  I           ++ E  AI+ G+ L   A    +S    L         L  
Sbjct: 105 RGLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFAAANSYFASAVKGLDSARL--QALGQ 162

Query: 151 THNIGLQGMLGGQMLDIQDEFIDE--------TQVFMIQKMKTG-ALMCFACESGAIMAH 201
            +      +  GQ LD+  E  D              + + KT    +      GA +A 
Sbjct: 163 LYVTMQAEVAYGQYLDLFAESRDLTADVPPSKESAMEVIRHKTARYSVVIPILIGAALAG 222

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A+ +   +L  F   LGI +QL DD L    
Sbjct: 223 ATPDLLAKLEDFSTPLGIAYQLRDDDLGIFG 253


>gi|254776305|ref|ZP_05217821.1| polyprenyl synthetase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 369

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 20/203 (9%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           + GGK +RS  V             ALR  A+ E +H ++L+ DD+  MD    RRG+P 
Sbjct: 63  VSGGKCLRSTFVYLGWLCGAPRDRAALRAAASFELLHAFALLQDDV--MDGAQERRGRPA 120

Query: 107 VH----------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
            H                 ++ E  AI+ G+  L +A +++     + +   R+      
Sbjct: 121 AHLQFGRWHQDRGLSGSPRRFGESAAILLGDLCLIWAEQMLRDSGLEARRLQRAFPRYDA 180

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER 209
                  G       DI+ +      V  + + K+G   +    E GA MA        R
Sbjct: 181 MRVELAVGQFADLTNDIR-QSPGLDAVLEVARRKSGNYTVRRPLEIGATMAGCDDRTVAR 239

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
           L  +G  +G  FQL DD+L    
Sbjct: 240 LSRYGAAVGEAFQLRDDVLGVFG 262


>gi|229820403|ref|YP_002881929.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
 gi|229566316|gb|ACQ80167.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
          Length = 362

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 92/253 (36%), Gaps = 33/253 (13%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           + +   ++  + + L    +   +   +   LL+A   A  GGK++R+ L          
Sbjct: 8   ERDRALVEQCVGESLDAAGAAYASIGPESLPLLAAAAQAATGGKRLRALLCCAAWEAAGG 67

Query: 68  NHLTA----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------------- 110
              +A    +  GAA+E     +L+HDD+  MD   +RRG P  H +             
Sbjct: 68  AVPSAGDPVVLAGAALELFQAAALVHDDV--MDASDVRRGAPAAHRRLAAEHRAAGLLGD 125

Query: 111 ---YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
              + E  AI+ G+ LL  +    +     +     ++      H  G   +  GQ LD 
Sbjct: 126 ADRFGEAGAILLGDLLLMLSSSTFARAVRLVPLERAARADEVYAHMSGEVTL--GQYLDV 183

Query: 167 -----IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
                  D   D  +   + + K     +      GA +A A  +        G  +G  
Sbjct: 184 YAALAPWDPAGDADRARRVIEAKAARYSVEHPLVLGAALAGADDDVLAWCSRVGLPVGTA 243

Query: 221 FQLADDLLDCEED 233
           FQL DD+L    D
Sbjct: 244 FQLRDDVLGVFGD 256


>gi|220912326|ref|YP_002487635.1| polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859204|gb|ACL39546.1| Polyprenyl synthetase [Arthrobacter chlorophenolicus A6]
          Length = 364

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 98/260 (37%), Gaps = 29/260 (11%)

Query: 1   MNGG--LPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSF 56
           M G   L ++  +    +   L   L      M     D   ++ +I   + GGK++R+ 
Sbjct: 1   MTGAEQLRNEQADFVASVAGELTGFLTSRQGIMSGISPDIDPIMGSISNLVTGGKRLRAL 60

Query: 57  LVTECASLFNVNHL--TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY--- 111
           +          +      +  GAA+E     +LIHDD+  +D    RRG P+VH ++   
Sbjct: 61  MCYWGWRGAGGDAGAAEVVTAGAALELFQAAALIHDDI--IDRSDTRRGGPSVHRRFSQL 118

Query: 112 -------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                         +  AI+AG+  L+++ E  +    +     R++L+ +L     + G
Sbjct: 119 HEAQGWALDSGRFGQAAAILAGDLCLSFSEEAFTDIGERAASGSRARLIFNLMRAEVMAG 178

Query: 159 MLGGQMLDIQDEFIDET----QVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCF 213
                + ++     D      +   I + K+           G  +A A+ +       F
Sbjct: 179 QYLDILEEVAGPVRDRAGAVSRAQSIIRFKSAKYSTEHPLALGGALAGATNDLLRGYSAF 238

Query: 214 GENLGIIFQLADDLLDCEED 233
              LG  FQL DD+L    D
Sbjct: 239 ALPLGEAFQLRDDVLGVFGD 258


>gi|291516753|emb|CBK70369.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
           subsp. longum F8]
          Length = 360

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 7   NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFD 66

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRG+P+ H   ++     
Sbjct: 67  ILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGRPSAHRALEQAVHSG 124

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 125 AIGRGLGLMLGDILATACIEITCRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 245 DDLLDVVG 252


>gi|304389368|ref|ZP_07371333.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315656626|ref|ZP_07909513.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|304327486|gb|EFL94719.1| possible dimethylallyltransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315492581|gb|EFU82185.1| polyprenyl synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 361

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 76/210 (36%), Gaps = 30/210 (14%)

Query: 50  GKKIRSFLVTE----CASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK+ R+          A            L +GA++E     +L+HDD+  +DN   RRG
Sbjct: 50  GKRFRAIAAYMGWISAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDI--IDNAIKRRG 107

Query: 104 KPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
            P   I           ++ +  AI+ G+ L   A    S   + L   + +    S   
Sbjct: 108 LPAAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLS--VENAHRASNFF 165

Query: 153 NIGLQGMLGGQMLDIQDEFI--------DETQVFMIQKMKTG-ALMCFACESGAIMAHAS 203
                 +  GQ LD+  E                 I K KT    +      GA +  AS
Sbjct: 166 VTMQAEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGAS 225

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +  E+L  F   LG+ +QL DD L    D
Sbjct: 226 DSLIEQLEGFATPLGVAYQLRDDDLGIFGD 255


>gi|117164789|emb|CAJ88338.1| putative polyprenyl synthetase [Streptomyces ambofaciens ATCC
           23877]
          Length = 352

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 23/238 (9%)

Query: 15  RIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           R+D +L   + + A H+    +    +   +R A   GK++R+                A
Sbjct: 13  RVDGVLRSYVDEEAGHLVAVDDALAPVAEQLRGAAGHGKRLRAAFCYWGWRAAGQPDDDA 72

Query: 73  L-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---------------TA 116
           L R  AA+E +H  +++HDDL  +D+  +R G PT H+  + V                A
Sbjct: 73  LVRAAAAMELVHAAAIVHDDL--IDDSPLRHGLPTAHVALEAVLARDGRRRPRAAARSLA 130

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           ++ G+ L+  A ++ +          R++ + +      + G     +          + 
Sbjct: 131 MLVGDHLMALAGQLFAGSGLPAAYLARARGLWAELARELVAGECLEILHTGGRPDTGTS- 189

Query: 177 VFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              + + KT    +      G ++A A    +E    +G  LG  FQL DDLL    D
Sbjct: 190 -LKVVRYKTAKYTVEHPLLIGGLLAGAGPGLREAYSAYGLPLGEAFQLRDDLLGLFGD 246


>gi|209879225|ref|XP_002141053.1| hexaprenyl pyrophosphate synthetase [Cryptosporidium muris RN66]
 gi|209556659|gb|EEA06704.1| hexaprenyl pyrophosphate synthetase, putative [Cryptosporidium
           muris RN66]
          Length = 505

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 97/284 (34%), Gaps = 64/284 (22%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-------------LGG 50
           G    ++ENS     +    L+   S  +     +LL  +   L             + G
Sbjct: 116 GFEDYIKENS-----VCSQFLISFISKERDYQKSKLLEIMSSYLPNSLQNVINYISEIPG 170

Query: 51  KKIRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSM 95
           K  R  L        N +                     +  A+E IH  SL+HDD+  +
Sbjct: 171 KLTRPELCFLIFLCMNNSSNEISIESLKSEIQLNSSQRILIKALEMIHIASLLHDDI--V 228

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   IRRGK + H+++    AI+ G+ L + A   ++  +        S ++  L     
Sbjct: 229 DESDIRRGKTSTHLKFGNKIAILTGDFLFSRACHSVAFLENINAMKHVSLIVEGLVRGEL 288

Query: 156 LQGMLGGQMLDIQDEFIDE------------------TQVFMIQKMKTGALMCFACESGA 197
           LQ     + LD   E +DE                           KT +LM     +  
Sbjct: 289 LQYNDLREFLDEIKENLDEMKNQNSTTTQIDIFNKYMKNYLSKIYYKTASLMSHGVSACV 348

Query: 198 IMAHASQN-----------EKERLRCFGENLGIIFQLADDLLDC 230
            +    Q+           +K+ +   G N GI FQL DDLLD 
Sbjct: 349 EVNGMQQSSNLIGNELFNIKKKTIFNIGLNFGIAFQLLDDLLDI 392


>gi|213691849|ref|YP_002322435.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213523310|gb|ACJ52057.1| Polyprenyl synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320457944|dbj|BAJ68565.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 360

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 7   NREIIEPRIIQLVRELTAAPATDEVTDALKPVMEQVVDQAASSSEGGKRLRALLALDAFD 66

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRG+P+ H   ++     
Sbjct: 67  ILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGRPSAHRALEQAVHSG 124

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 245 DDLLDVVG 252


>gi|329941631|ref|ZP_08290896.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
 gi|329299348|gb|EGG43248.1| polyprenyl synthetase [Streptomyces griseoaurantiacus M045]
          Length = 337

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 32/248 (12%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+G + + L E S+++   +D  L   A        ++L  A  +    GK++R+     
Sbjct: 1   MDGIVHTFLAEESRQL-LRIDQALRPVA--------EQLRRAAAH----GKRLRAAFCYW 47

Query: 61  CASLFN-VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT---- 115
                   +    LR  A++E +H  + +HDDL  +D+  +R G PTVH+          
Sbjct: 48  GWRAAGQPDSEALLRAAASLELVHAAATVHDDL--IDDSPLRHGLPTVHVALRSALTGRP 105

Query: 116 ---------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                    A++ G+ L+  A  + +          R++ +        + G     +  
Sbjct: 106 RAGAVARDLAMLVGDHLMALAGRLFADCGLPAAYLARARTLWGDLARELIAGECLEILHT 165

Query: 167 IQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                 D +    + + KT    +      GA++A A+ + +     +G  LG  FQL D
Sbjct: 166 GGRPDTDTS--LKVIRYKTAKYTVEQPLLLGALLAGAAPDLRAGFSAYGLPLGEAFQLRD 223

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 224 DLLGLFGD 231


>gi|46191324|ref|ZP_00206770.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bifidobacterium
           longum DJO10A]
 gi|189439158|ref|YP_001954239.1| geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
           DJO10A]
 gi|322689400|ref|YP_004209134.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           infantis 157F]
 gi|189427593|gb|ACD97741.1| Geranylgeranyl pyrophosphate synthase [Bifidobacterium longum
           DJO10A]
 gi|320460736|dbj|BAJ71356.1| isoprenyl diphosphate synthase [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 360

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 7   NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFD 66

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRG+P+ H   ++     
Sbjct: 67  ILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGRPSAHRALEQAVHSG 124

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 125 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 184

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 185 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 244

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 245 DDLLDVVG 252


>gi|114769799|ref|ZP_01447409.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha
           proteobacterium HTCC2255]
 gi|114549504|gb|EAU52386.1| Geranylgeranyl pyrophosphate synthetase (gdS-1) [alpha
           proteobacterium HTCC2255]
          Length = 335

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 8/197 (4%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +A  +    GK +R+ +  + ASL  ++  T+L   AA+E +H  SLIHDD+   D    
Sbjct: 47  AAFFHFKTPGKMLRAKMAIQSASLAEIDISTSLLWAAAVEVLHNASLIHDDIC--DGDKQ 104

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+ ++ +++   TA+  G+ L+  +FE ++S   ++ +  R   +L+        G  
Sbjct: 105 RRGRESIWVKFGRDTALTLGDWLIALSFE-LASEAAEMSNTPRLVGVLARHMATTTAGQA 163

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
              M    +          I   KT  L+      G  +   +      +  +  +LG  
Sbjct: 164 ---MEFGWNSTQSWDVYLKIAADKTAPLLTAPIH-GVTLMSGTSGLGFAISGYFCDLGKA 219

Query: 221 FQLADDLLDCEE-DLPK 236
           +Q+A+D+ + +  D  K
Sbjct: 220 YQIANDIQNFKGTDGAK 236


>gi|260906389|ref|ZP_05914711.1| putative geranylgeranyl pyrophosphate synthase [Brevibacterium
           linens BL2]
          Length = 354

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 93/255 (36%), Gaps = 24/255 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV 58
           M   + S L + +      L  +L       +       +L  ++ +   GGK IR  L+
Sbjct: 1   MTDSITS-LDDIAFSFQDRLVQVLTDARHRSRGVSAQYGQLWDSLTHMATGGKLIRPRLL 59

Query: 59  TECASLFNV-NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH--------- 108
            +        +   A+    A++ +H   +IHDD+  +DN  IRRG+  +          
Sbjct: 60  LDAHRGLGGRDQAAAVDAACAMQLLHIALVIHDDV--IDNDTIRRGEANISGEFASDALC 117

Query: 109 --------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
                     + + TA++ G+ +LT A  +++  +           +   T      G  
Sbjct: 118 RGAGRREAQVWGDATALLGGDLMLTLAHSLLARLEVDDSKRRAILDIFDDTLFRSAAGEH 177

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
               L +  E     +V  +   KT            A++A AS  +   L      +GI
Sbjct: 178 SDVWLSLHLEEARSQEVLEMAGQKTAVYSFQAPLLIAAVLAGASSTQTAELAAIAAQIGI 237

Query: 220 IFQLADDLLDCEEDL 234
           ++QL DD+L    D 
Sbjct: 238 VYQLRDDVLGLFGDE 252


>gi|156360985|ref|XP_001625302.1| predicted protein [Nematostella vectensis]
 gi|156212129|gb|EDO33202.1| predicted protein [Nematostella vectensis]
          Length = 303

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 16/194 (8%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + LL   +Y L + GK++R  L+        +       +   ++ +H  SL+ DD+   
Sbjct: 14  EILLEPYKYILQVPGKQVRETLIQAFNVWLKIPEDKLKIIADVVKMLHNSSLLIDDIE-- 71

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG P  H  Y     I + N +   A E + S       ++ ++ +L L    G
Sbjct: 72  DNSKLRRGIPVAHTIYGVAQTINSANYIYFKALEKVLSLNHPECIHVFTEELLELHRGQG 131

Query: 156 LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +        +  +D +    E +   + + KTG L   A     + +    +    L   
Sbjct: 132 M-------DIYWRDSYTCPTEEEYRDMVRKKTGGLFRVAVRLMQLFSENKSDFLPLLDM- 183

Query: 214 GENLGIIFQLADDL 227
              LG+ FQ+ DD 
Sbjct: 184 ---LGLYFQIRDDY 194


>gi|291437332|ref|ZP_06576722.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
 gi|291340227|gb|EFE67183.1| polyprenyl diphosphate synthase [Streptomyces ghanaensis ATCC
           14672]
          Length = 384

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 80/191 (41%), Gaps = 15/191 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK IR  LV   AS    +      V AA   E +H ++L+HDD+  MD    RR +PT 
Sbjct: 143 GKAIRPALVLAAASALGGSEARRAAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRPTA 200

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              + +  AI+AG+           +     +D   +    +      +  +  GQ  D 
Sbjct: 201 WTVFGDADAILAGDA------LQALALGLLAEDPHPAAPAAAARLAHCVVELCAGQHTDT 254

Query: 168 QDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             E      +   +   + + KTGAL+  AC  GA+ A A   +   L  FG   G+ FQ
Sbjct: 255 AMERRGPGEVTLAETLTMAEAKTGALLGCACAIGALYADAEDADVAALDAFGREAGLAFQ 314

Query: 223 LADDLLDCEED 233
           L DD++    D
Sbjct: 315 LIDDVIGIWGD 325


>gi|29841005|gb|AAP06018.1| similar to NM_010282 geranylgeranyl diphosphate synthase 1; GGPP
           synthase in Mus musculus [Schistosoma japonicum]
          Length = 335

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 15/180 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS L+        V   T   + + I+ +H  SLI DD+   D  Y+RRGKP  H 
Sbjct: 29  GKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDDIE--DGSYLRRGKPAAHC 86

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   ++I + N +   A E +S  +      I ++ ML L    G+        +  + 
Sbjct: 87  VFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELHRGQGM-------DIYWRS 139

Query: 170 EFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            F    E++   +   KTG L         + +    + K  L      +G+ FQ+ DD 
Sbjct: 140 SFKCPSESEYEAMVLCKTGGLFGLGVRLMQLFSKNQTDYKPLLDT----IGLFFQIRDDY 195


>gi|297243593|ref|ZP_06927524.1| bifunctional short chain isoprenyl diphosphate synthase
           [Gardnerella vaginalis AMD]
 gi|296888344|gb|EFH27085.1| bifunctional short chain isoprenyl diphosphate synthase
           [Gardnerella vaginalis AMD]
          Length = 368

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 29/245 (11%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN---- 68
           S++ +T L+D L  T +    Q   +++     +  GGK +R+ L        +      
Sbjct: 23  SQQFNTGLEDNLSSTCA----QTLQQVIKQAIVSSEGGKLLRALLTISAFYAASKETNIQ 78

Query: 69  ---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI---QYDEVTAIIAGNG 122
                +   +  A+E     +LIHDD+  +D  Y+RRGKP+ +    +      I  G G
Sbjct: 79  KIHEQSVFDIACALEVFQTAALIHDDI--IDESYLRRGKPSAYCALSKACNNKHIGTGLG 136

Query: 123 LLTY---AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----- 174
           L+     A E     +   K+    + +L+       + +  GQ+LD+  E +       
Sbjct: 137 LMLGDLLATESFDIARNCAKNFTYGEELLA-AFASMQRNVGIGQVLDLSIEMMQLDNPIQ 195

Query: 175 --TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRC-FGENLGIIFQLADDLLDC 230
                  + + KT           G + A+    E   L    G +LG+ FQ+ADDLLD 
Sbjct: 196 LAESSLNVFRWKTASYTTVAPLTLGFLAANMQPTEAYNLANSIGNSLGVAFQIADDLLDI 255

Query: 231 EEDLP 235
             D  
Sbjct: 256 VSDSK 260


>gi|294811348|ref|ZP_06769991.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC
           27064]
 gi|326439920|ref|ZP_08214654.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294323947|gb|EFG05590.1| Putative polyprenyl synthetase [Streptomyces clavuligerus ATCC
           27064]
          Length = 362

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 27/252 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQT----QHNDRLLSAIRY-ALLGGKKIRSFL 57
            G   ++  + +R D +      + A+        +   R +  +R  +L GGK++R  L
Sbjct: 9   AGARERIAAHRRRFDPLFAAYFDRLAAAPGPFTAGRFPARCVELLRDQSLRGGKRLRVAL 68

Query: 58  VTECASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD---- 112
           + E A L  +           ++E +H + L+HDD+  +D+  +RRG P+V+  Y     
Sbjct: 69  LHEAARLVTDAEVPGLDEAALSVELLHTHGLVHDDI--VDDAPLRRGAPSVYYAYRAEFP 126

Query: 113 ------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
                    A++AG+     + +++      L D +R  L    T        + GQ LD
Sbjct: 127 GQERTAVGLAVLAGDLAAFLSVQVLLEA--PLPDGLRLALAQEQTRASA--ETVLGQFLD 182

Query: 167 IQDEFID---ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIF 221
           ++ +      +  +  + + K+    +      G + A          LR +   +GI  
Sbjct: 183 LERDVPPLPGDDFLHTVTEFKSARYSILAPLRLGLLAAGEDPEPYAGELRRYAVLVGIYE 242

Query: 222 QLADDLLDCEED 233
           Q+ DD LD   D
Sbjct: 243 QMRDDYLDLFGD 254


>gi|315655468|ref|ZP_07908367.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333]
 gi|315490123|gb|EFU79749.1| polyprenyl synthetase [Mobiluncus curtisii ATCC 51333]
          Length = 361

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 78/210 (37%), Gaps = 30/210 (14%)

Query: 50  GKKIRSF-----LVTECASL-FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK+ R+       V+    L         L +GA++E     +L+HDD+  +DN   RRG
Sbjct: 50  GKRFRAIAAYMGWVSAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDI--IDNAIKRRG 107

Query: 104 KPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
            P   I           ++ +  AI+ G+ L   A    S   + L   + +    S   
Sbjct: 108 LPAAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLS--MENAHRASNLF 165

Query: 153 NIGLQGMLGGQMLDIQDEFI--------DETQVFMIQKMKTG-ALMCFACESGAIMAHAS 203
                 +  GQ LD+  E                 I K KT    +      GA +  AS
Sbjct: 166 VTMQAEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGAS 225

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +  E+L  F   LG+ +QL DD L    D
Sbjct: 226 DSLIEQLEGFATPLGVAYQLRDDDLGIFGD 255


>gi|282862498|ref|ZP_06271560.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282562837|gb|EFB68377.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 383

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 105/256 (41%), Gaps = 32/256 (12%)

Query: 4   GLPSKLQENSKRIDTILDDLL---LQTASHMQTQHNDRLL-SAIRYALLGGKKIRSFLVT 59
           G PS + + +  +D  L   L   LQ A  M     + +      + L GGK++R+  V 
Sbjct: 19  GAPSTVGDATAAVDAFLASYLDDRLQEARQMDAVFAEEVAGRVAAFVLRGGKRLRTAFVW 78

Query: 60  --ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-- 115
               A+    +  T +R+GAA+E +   +L+HDD+  MD   +RRG P VH  +      
Sbjct: 79  CGWLAAGRGGDPGTPVRIGAALELLQACALVHDDV--MDGSPVRRGAPAVHADFARAHRE 136

Query: 116 --------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                         A++AG+  L +A ++++          R         +     M+ 
Sbjct: 137 AGLRGSAASYSATAAVLAGDLALAWADDLLTETALAAPHGDRLHREWRAMRS----EMVA 192

Query: 162 GQMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ LD++ +     D  +   I  +K+    +      GA+ A A       LR  G   
Sbjct: 193 GQYLDLRAQATGSSDGDEARTIATLKSALYTVERPLALGAVSAAADARATAALRSAGRCA 252

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQL DDLL    D
Sbjct: 253 GLAFQLRDDLLGAFGD 268


>gi|239621275|ref|ZP_04664306.1| probable bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|239515736|gb|EEQ55603.1| probable bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium longum subsp. infantis CCUG 52486]
          Length = 366

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 90/248 (36%), Gaps = 29/248 (11%)

Query: 12  NSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYAL-------LGGKKIRSFLVTECAS 63
           N + I+  +  L+ + TA+    +  D L   +   +        GGK++R+ L  +   
Sbjct: 13  NREIIEPRIIQLVRELTAAPATDEVADALKPVMEQVVDQAASSSQGGKRLRALLALDAFD 72

Query: 64  LFNVN-----HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           +   +         + +  AIE     +L+HDD+  +D   +RRG+P+ H   ++     
Sbjct: 73  ILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDI--IDESDLRRGRPSAHRALEQAVHSG 130

Query: 119 A---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           A         G+ L T   EI     ++L +                 G +    +++  
Sbjct: 131 AIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAVEMTP 190

Query: 170 EFIDET---QVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLA 224
               E        + + KT             + A  S ++        G  LG+ FQLA
Sbjct: 191 LSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLAFQLA 250

Query: 225 DDLLDCEE 232
           DDLLD   
Sbjct: 251 DDLLDVVG 258


>gi|156554759|ref|XP_001605679.1| PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis]
          Length = 314

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 16/199 (8%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
             + +++LL    Y L + GK+IR  L         +       VG   + +H  SL+ D
Sbjct: 15  DKEQDEKLLQPFTYILQVPGKQIRGKLAHAFNYWLKIPVEKLQAVGDITQMLHNSSLLID 74

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   DN  +RRG P  H  Y   + I A N +L  A E + S        + ++ +L L
Sbjct: 75  DIQ--DNSILRRGIPVAHSIYGVASTINAANYVLFIALERVISLNHPEATQVYTEQLLEL 132

Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G++       +  +D FI   E +   +   KTG L   A     + +      KE
Sbjct: 133 HRGQGME-------IYWRDNFICPSEAEYRTMTIRKTGGLFNLAVRLMQLFSDC----KE 181

Query: 209 RLRCFGENLGIIFQLADDL 227
                   LG+ FQ+ DD 
Sbjct: 182 DFTPLAGILGLYFQIRDDY 200


>gi|297153619|gb|ADI03331.1| hypothetical protein SBI_00210 [Streptomyces bingchenggensis BCW-1]
          Length = 466

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 14/146 (9%)

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +D+  +RRG+ T + +Y +  A++ G+ LL    +  +S                ++   
Sbjct: 2   IDDAQVRRGRSTTNAKYGDAIALLTGDYLLARCMQAAASLGASP----------MMSMAE 51

Query: 155 GLQGMLGGQML---DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            L  +  GQML    + D    E         KT  LM  A   GA+  +AS + ++ L 
Sbjct: 52  TLIDVCVGQMLESSQLFDPLRTEEDYLTAVSGKTARLMRTATTMGALQCNASNDVQDALE 111

Query: 212 CFGENLGIIFQLADDLLDC-EEDLPK 236
            FG NLG+ FQ+ DD+LD   E+  K
Sbjct: 112 SFGHNLGMAFQIWDDILDICSEETGK 137


>gi|118618810|ref|YP_907142.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           ulcerans Agy99]
 gi|118570920|gb|ABL05671.1| geranylgeranyl pyrophosphate synthetase IdsA2 [Mycobacterium
           ulcerans Agy99]
          Length = 340

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 85/215 (39%), Gaps = 31/215 (14%)

Query: 44  RYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
            + L GGK++R                    L + +A+E +H ++LIHDD+  +D    R
Sbjct: 24  EFVLSGGKRLRPIFAYRGWPAVTTEDPDPDLLLLFSALELLHAWALIHDDV--IDASSTR 81

Query: 102 RGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNI 142
           RG+P  HI                Q+    AI+ G+    +A +IIS             
Sbjct: 82  RGRPMAHIHFAALHRDRNWLGPAQQFGISAAILIGDVAQAWADDIISRVSQSSLSPDAQR 141

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAI 198
           R Q + S         +LGGQ LDI  E       T    +   KT    +    + GA 
Sbjct: 142 RVQRVWSDIRT----EVLGGQYLDIVAEASAADSITSAMTVATFKTACYTVSRPLQLGAA 197

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A    + +E    FG +LG+ FQL DD+L    D
Sbjct: 198 AAADRPDVQEAFHQFGTDLGVAFQLRDDVLGVFGD 232


>gi|302539632|ref|ZP_07291974.1| putative mucin-2 [Streptomyces hygroscopicus ATCC 53653]
 gi|302457250|gb|EFL20343.1| putative mucin-2 [Streptomyces himastatinicus ATCC 53653]
          Length = 468

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 84/211 (39%), Gaps = 19/211 (9%)

Query: 38  RLLSAIRYALL-----GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           RL  A+   LL      G+  R ++      L + +      + A  E +H  +L+ DD+
Sbjct: 133 RLHRAVAAPLLHLLNNPGRSWRPYVAAAVLCLLDADPEPYRPLTAVTELLHLSALVIDDI 192

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAG-------NGLLTY----AFEIISSPKTQLKDN 141
              D+   RRG+P+VH  +    AI AG       + L+      A E +         +
Sbjct: 193 Q--DDSPTRRGRPSVHEVFGTAPAITAGTLGYYTFDALIQRVPQAAPETMLRIYRLYLRD 250

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +R+        +I        + +   D      +V    ++KTG L+    E  A++  
Sbjct: 251 LRAAH-AGQALDIAGHHAAFDEAVTSGDARPLLDEVRTAHRLKTGMLVRSTAEVSALLGG 309

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A + + + +  + E +G  +Q+ DD+ D   
Sbjct: 310 ADERQLDAICRYFEAVGTAYQITDDVADLYG 340


>gi|298710752|emb|CBJ32173.1| geranylgeranyl pyrophosphate synthase, chloroplast precursor
           [Ectocarpus siliculosus]
          Length = 254

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 1/94 (1%)

Query: 41  SAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           ++I Y+L+ GGK++R  L      +F  +   A+    + E IH  SLIHDDLP+MD+  
Sbjct: 143 ASIHYSLMAGGKRVRPILTIAACEMFGGSMEAAMPTAVSTEMIHTMSLIHDDLPAMDDDD 202

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           +RRG PT H++Y E  AI+AG+ LL+ +FE  + 
Sbjct: 203 LRRGMPTCHVKYGEDIAILAGDALLSKSFEHCAK 236


>gi|254381308|ref|ZP_04996673.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
 gi|194340218|gb|EDX21184.1| polyprenyl diphosphate synthase [Streptomyces sp. Mg1]
          Length = 404

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 93/249 (37%), Gaps = 31/249 (12%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
           +  +  ++    D +  + S      +D       +   GG +IRS  +           
Sbjct: 36  EAVTSELERCCADFVAHSLSLDPVFSHDVAERLAAFTCDGGSRIRSRFLWWALRACGGTD 95

Query: 70  LT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------------- 110
                ALRV AA+E I   +LIHDD+  MD   +RRGKP+ H Q                
Sbjct: 96  AHTPGALRVAAALELIQSCALIHDDV--MDQSAVRRGKPSFHTQIALQYSRTTAARQPGL 153

Query: 111 --YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             + +  A++AG+  L++A ++++     L   +R++ +           M+ GQ LD+ 
Sbjct: 154 SPFPQAAAVLAGDLALSWADDLVAEA--DLDPPVRTEALRIW--RAMRTEMIAGQYLDLH 209

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK----ERLRCFGENLGIIFQLA 224
            +           +        +  E    +  A           L   G   GI FQL 
Sbjct: 210 GQATSSRSAVQAIRTVCLKAARYTVEQPLALGAALAGADDANTRALTAAGRCAGIAFQLR 269

Query: 225 DDLLDCEED 233
           DDLL   +D
Sbjct: 270 DDLLGVFDD 278


>gi|300785964|ref|YP_003766255.1| polyprenyl synthetase [Amycolatopsis mediterranei U32]
 gi|299795478|gb|ADJ45853.1| polyprenyl synthetase [Amycolatopsis mediterranei U32]
          Length = 367

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 21/227 (9%)

Query: 25  LQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
            +   H   +    L   A+   + GGK +R                 A+R  AA+E +H
Sbjct: 38  ARAKEHFSGRSEGALAETAVPEFVAGGKCLRPLFAYVGWRCGQPESDAAVRAAAALELLH 97

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAGNGLLTYA 127
           C++L+ DD+  MD   +RRG+  +H+++                 E  AI+ G+  L ++
Sbjct: 98  CFALVQDDV--MDGSALRRGRTALHVRFARWHEEQGWAGSAPRFGESAAILFGDLFLVWS 155

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG- 186
            +++       +   R              G L   + D +        +  + + K+G 
Sbjct: 156 EQMLRESGLAAEQLARGWGHYDAMRAELAVGQLADLVNDARA-LPSWDTLLDVLRRKSGN 214

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +    E GA +A         L  FG  +G  FQL DDLL    D
Sbjct: 215 YTVRRPLEFGAALAGCGPELMAGLGEFGGLVGEAFQLRDDLLGVFGD 261


>gi|229817447|ref|ZP_04447729.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM
           20098]
 gi|229785236|gb|EEP21350.1| hypothetical protein BIFANG_02710 [Bifidobacterium angulatum DSM
           20098]
          Length = 359

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 27/205 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLT---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           GGK++R+ L+      F+ +  T    L V  A+E     +L+HDD+  +D+  +RRGKP
Sbjct: 52  GGKRLRALLMLAAYDAFDGHADTRNAMLDVACALEVFQTAALVHDDI--IDDSDLRRGKP 109

Query: 106 TVHIQYDEVTAIIA---------GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           + H   +  T   A         G+ L T   +I++     L         L+       
Sbjct: 110 SAHRALETDTGSPAIGRGLGLMLGDLLATVCIDIVNEAAALLPH----ATALTSAFLNMQ 165

Query: 157 QGMLGGQMLDIQDEFIDETQVFM-------IQKMKTGALMCFACESGAIMA--HASQNEK 207
           + +  GQ+LD+  E                + + KT +    A    A++    A    +
Sbjct: 166 REVEIGQILDLAVEQAPLQDAEALANASLNVFRWKTASYTTIAPIELALLGSGAAPGQAR 225

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
           ER    G+ LG+ FQL DDL+D   
Sbjct: 226 ERALAIGKPLGLAFQLEDDLIDVIG 250


>gi|298346921|ref|YP_003719608.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC
           43063]
 gi|298236982|gb|ADI68114.1| geranylgeranyl pyrophosphate synthase [Mobiluncus curtisii ATCC
           43063]
          Length = 361

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 76/210 (36%), Gaps = 30/210 (14%)

Query: 50  GKKIRSFLVTE----CASLF--NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK+ R+          A            L +GA++E     +L+HDD+  +DN   RRG
Sbjct: 50  GKRFRAIAAYMGWISAAGPLRTGEIPDQLLDLGASLELFQTSALVHDDI--IDNAIKRRG 107

Query: 104 KPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
            P   I           ++ +  AI+ G+ L   A    S   + L   + +    S   
Sbjct: 108 LPAAQIAFMTSFPMGGPRFGDSAAILWGDLLYAAANSYFSQAISTLS--VENAHRASNFF 165

Query: 153 NIGLQGMLGGQMLDIQDEFI--------DETQVFMIQKMKTG-ALMCFACESGAIMAHAS 203
                 +  GQ LD+  E                 I K KT    +      GA +  A+
Sbjct: 166 VTMQAEVAYGQFLDLSAETRELSPDMPPSREAAMEIIKHKTARYSVVIPLLLGAALRGAN 225

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +  E+L  F   LG+ +QL DD L    D
Sbjct: 226 DSLIEQLEGFATPLGVAYQLRDDDLGIFGD 255


>gi|269977242|ref|ZP_06184215.1| dimethylallyltransferase [Mobiluncus mulieris 28-1]
 gi|307700943|ref|ZP_07637968.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
 gi|269934545|gb|EEZ91106.1| dimethylallyltransferase [Mobiluncus mulieris 28-1]
 gi|307613938|gb|EFN93182.1| polyprenyl synthetase [Mobiluncus mulieris FB024-16]
          Length = 360

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 75/211 (35%), Gaps = 29/211 (13%)

Query: 47  LLGGKKIRSFLVTECASLFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIR 101
           LL GK+ R+                 +      +G  +E     +++HDD+  +D   IR
Sbjct: 47  LLRGKRFRAIGAYIGWIASGGTVSPQIPGCLLDLGTCLELFQASAIVHDDI--IDEARIR 104

Query: 102 RGKPTVHI-----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           RG P+  I           ++ E  AI+ G+ L   A    +S    L         L  
Sbjct: 105 RGLPSAQIAFMTSSPAGGPKFGESAAILWGDLLFAAANSYFASAVKGLDSARL--QALGQ 162

Query: 151 THNIGLQGMLGGQMLDIQDEFIDE--------TQVFMIQKMKTG-ALMCFACESGAIMAH 201
            +      +  GQ LD+  E  D              + + KT    +      GA +A 
Sbjct: 163 LYVTMQAEVAYGQYLDLFAESRDLTADVPPSKESAMEVIRHKTARYSVVIPILIGAALAG 222

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A+ +   +L  F   LGI +QL DD L    
Sbjct: 223 ATPDLLVKLEDFSTPLGIAYQLRDDDLGIFG 253


>gi|62288317|gb|AAX78434.1| farnesyl diphosphate synthase [Anthonomus grandis]
          Length = 438

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 91/257 (35%), Gaps = 38/257 (14%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-------YALLGGKKIRSFLVTECA 62
           +E S+    +  DL+ +     +   N  L   +R       Y +  GKK R  ++    
Sbjct: 96  KEQSRDFMALFPDLVRELT---ELGRNPELPDVMRRVARVLQYNVPNGKKNRGLILISAY 152

Query: 63  SLFN-------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            +          N   A  +G  +E IH   L+ DD+  MDN   RRG    + Q     
Sbjct: 153 KMLEDPKNLTPENIKLASVLGWCLEMIHSCFLVLDDI--MDNSETRRGSLCWYRQNGIGL 210

Query: 116 -AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----- 169
            AI  G  L    + ++   K  L+D+     ++ L H    +  L GQ LD        
Sbjct: 211 SAINDGLILENAVYTLL---KMHLRDHPAYVPIIELFHETVSKTTL-GQCLDSMCLDSDG 266

Query: 170 ----EFIDETQVFMIQKMKTGAL-MCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQL 223
               E    ++   I K KT              +A      +  + +     +G  FQ+
Sbjct: 267 KPKLEMFSMSRYTSIVKYKTAYYSFHMPVAVAMYLAGMNDPEQHRQAKTILLEMGEFFQI 326

Query: 224 ADDLLDCEED---LPKK 237
            DD LDC  D     KK
Sbjct: 327 QDDFLDCFGDPAVTGKK 343


>gi|71005942|ref|XP_757637.1| hypothetical protein UM01490.1 [Ustilago maydis 521]
 gi|46097068|gb|EAK82301.1| hypothetical protein UM01490.1 [Ustilago maydis 521]
          Length = 946

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 63/220 (28%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+    E IH  SL+HDD+  +D   +RRG P+    +    +I+ G+ LL  A   ++ 
Sbjct: 238 RLAEITEMIHVASLLHDDV--IDASPLRRGAPSAPSAFGNKLSILGGDFLLGRASVALAR 295

Query: 134 PKTQLKDNIRSQLMLS--------------------------------------LTHNIG 155
            +      + + ++ +                                      L H +G
Sbjct: 296 LRDAEVVELLATVIANLVEGEVMQLKSQAAAAESSNASASSTPTHADVWGSEGLLAHTMG 355

Query: 156 LQGMLGGQMLDIQDEFIDETQ------VFMIQKMKTGALMCFACESGAIMAHASQN---- 205
           L  +   + +D      ++              +KT AL+  +  +  I+A    +    
Sbjct: 356 LSDLQAKKAIDDALSTHNQPTPAHFSLYLQKTYLKTAALIAKSTRASVILAGCGADAVHK 415

Query: 206 -------------EKERLRCFGENLGIIFQLADDLLDCEE 232
                         ++    +G NLGI FQL DDLLD + 
Sbjct: 416 AKLAPSVAEHMRAVRDAAYGYGRNLGIAFQLVDDLLDFQS 455


>gi|297571334|ref|YP_003697108.1| polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931681|gb|ADH92489.1| Polyprenyl synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 350

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 86/253 (33%), Gaps = 36/253 (14%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRL----LSAIRYALLGGKKIRSFLVTECASLFN 66
           +    + + L D+L       +T  +  L    ++       GGK+ R+  V       +
Sbjct: 5   DFRHAVSSRLTDVLSVVPPFSETARDSELFQEFIAPAVALSSGGKRTRALCVAGGFEAIS 64

Query: 67  VNHLTA-LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------------I 109
                  L    A+E     +L+HDD+  +D+   RRG P  H                 
Sbjct: 65  RQTQDLPLHAAVAVELYQASALVHDDI--IDDAETRRGIPAPHRLFAAQHEQLGFIGEAA 122

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            + + + ++ G+ LL+   E  +          R+  +     N        GQ +D++ 
Sbjct: 123 LFGQHSGVLLGDYLLSCGGEEFAKQDAPDGAFRRAFAL----FNEMASETAFGQYMDMRA 178

Query: 170 EFIDE--------TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           EF              F++   K+    +      G  +A    +   RL  F   LG  
Sbjct: 179 EFTPLSNDADCAVDDAFLVLLHKSARYSIELPVLIGVALAGGDDDAAARLTLFTRPLGEA 238

Query: 221 FQLADDLLDCEED 233
           FQL DD L    D
Sbjct: 239 FQLRDDELGIFGD 251


>gi|307945555|ref|ZP_07660891.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
 gi|307771428|gb|EFO30653.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
          Length = 172

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 8/127 (6%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           D +    R+ +  GGK++R  L   CA +F       + + A++E +H  +L+HDD+  +
Sbjct: 44  DLIPEIARHLISSGGKRLRPMLTLACADMFGYRGDGHVVLAASVEFMHTATLLHDDV--V 101

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +RRGK      +    +++ G+ LL  AF+++    +     + +  +LS    I 
Sbjct: 102 DESDMRRGKLAARKLWGNQASVLVGDYLLGQAFKMMVDVGS-----LEALRILSEASAII 156

Query: 156 LQGMLGG 162
            +G +  
Sbjct: 157 AEGEVMQ 163


>gi|223938575|ref|ZP_03630466.1| Polyprenyl synthetase [bacterium Ellin514]
 gi|223892694|gb|EEF59164.1| Polyprenyl synthetase [bacterium Ellin514]
          Length = 189

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           + E  A++AG+ LLT AFEI ++            L+L +    G   ++ GQ+ D++ E
Sbjct: 1   FGEGIAVLAGDALLTQAFEI-AALSPSWPRYTHKDLVLEIARASGSLQLIAGQVADLEAE 59

Query: 171 F--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
              I   Q+  I + KT AL+C +   G + A+ +  + + L  FG N+G+ FQ+ DD+L
Sbjct: 60  GKRISTAQLKYIHERKTSALLCCSVRLGGMSANCTPAQLKALTDFGYNVGLAFQIIDDIL 119

Query: 229 DCEE 232
           D  +
Sbjct: 120 DVTQ 123


>gi|269956783|ref|YP_003326572.1| polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305464|gb|ACZ31014.1| Polyprenyl synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 365

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 32/214 (14%)

Query: 49  GGKKIRSFLVTECASLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK++R+                      +R GAA+E     +L+HDD+  MD    RRG
Sbjct: 49  GGKRLRAAFAYWSFRAHGGADAGPEREAVVRTGAALELFQAAALLHDDV--MDASDTRRG 106

Query: 104 KPTVHI----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           +PT H                 ++ E  AI+ G+  L      I+     L    R++ +
Sbjct: 107 QPTAHRAFEARHATAGWAGEPVRFGESAAILLGDLCLVATQREIAEALAPLPRE-RAEAV 165

Query: 148 LSLTHNIGLQGMLGGQM-------LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIM 199
            +    +  + ++G  +           D   DE +   + + KT    +      GA++
Sbjct: 166 RAAFDTMQSEVIVGQYLDVLVQAEPWGLDPHADEERARAVIRAKTTSYSVRQPLVVGALI 225

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A A+  +   +   G  LG  FQL DD+L    D
Sbjct: 226 AGATPAQVAAVAAVGLPLGEAFQLRDDVLGVFGD 259


>gi|294790967|ref|ZP_06756125.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Scardovia inopinata F0304]
 gi|294458864|gb|EFG27217.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Scardovia inopinata F0304]
          Length = 392

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 79/224 (35%), Gaps = 35/224 (15%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHL---TALRVGAAIECIHCYSLIHDDLPSMDN 97
            A+R +  GGK++R+ L+   A    ++     +AL +  A+E     +L+HDD+  +D+
Sbjct: 50  QAVR-SCQGGKRLRAQLLGAVAQACGLSADLMPSALDLACALEIFQTAALVHDDI--IDD 106

Query: 98  GYIRRGKPTVHIQYDEVTA----------------IIAGNGLLTYAFEIISSPKTQLKDN 141
              RRG P+ H      T                    G GL     +I+++    +   
Sbjct: 107 SDTRRGAPSAHRALANETGPEENLEKNSENNSEEKNHIGIGLGIMLGDILATLSVDVAHR 166

Query: 142 IRSQLMLSLTHNIGLQGMLG----GQMLDIQDEFID-------ETQVFMIQKMKT-GALM 189
              Q   S         M      GQ++D+  E +        E Q       KT     
Sbjct: 167 SSRQFPQSYALLEAFLDMHRQVEKGQIMDLAMESLPLTDPDLIEDQAKQTYWWKTSSYTT 226

Query: 190 CFACESGAIMAHASQNEKERLR-CFGENLGIIFQLADDLLDCEE 232
                   I      +    +    G  LG+ FQL DD++D   
Sbjct: 227 IAPLRLALIACGYDPHTASSIAHQVGTPLGLAFQLNDDVIDIIS 270


>gi|156974446|ref|YP_001445353.1| hypothetical protein VIBHAR_02161 [Vibrio harveyi ATCC BAA-1116]
 gi|156526040|gb|ABU71126.1| hypothetical protein VIBHAR_02161 [Vibrio harveyi ATCC BAA-1116]
          Length = 236

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 9/170 (5%)

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             +N   A+R+ +A+E +H  SLIHDD+   D   +RRG+  V +++    AI  G+ L+
Sbjct: 5   LGLNDEDAMRLASAVELLHNASLIHDDIQ--DGDSLRRGQSAVWVKFGTNVAICTGDYLI 62

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFMIQKM 183
             AF I+++  +    N+  QL+ +  + + +   + GQ  D    E I       I + 
Sbjct: 63  ARAFGILANISS---PNVLPQLLEATQNAVSVT--VEGQNADLTAKEHISPQNYESIAEK 117

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K G L+  + E   I +    NE    R    +L I +Q+ DD+ D  ED
Sbjct: 118 KAGPLLALSLELPLISSG-RLNEIPTARHAASSLAIAYQILDDIKDSVED 166


>gi|126180126|ref|YP_001048091.1| polyprenyl synthetase [Methanoculleus marisnigri JR1]
 gi|125862920|gb|ABN58109.1| Polyprenyl synthetase [Methanoculleus marisnigri JR1]
          Length = 295

 Score =  111 bits (279), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 18/225 (8%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT---ECASLF 65
            +E  ++I  ++D  + +TA          + SA+   L  GK++R+ L+       +  
Sbjct: 4   FREFLEKIRPVVDRRIAETAG-----GEGEIDSAVLALLSKGKRMRAGLLLYIHAGLART 58

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                 AL +  A+E  H  SLI DD+  +D    RRG P++H+   E  A++   G+L 
Sbjct: 59  AAPTRQALDLACAVELAHAASLILDDM--LDGDTARRGVPSLHLTRGEGRAVLDAVGILA 116

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
             + + +         + S     +   +    MLGG  L              I   KT
Sbjct: 117 LPYALAAPYGAGYVTMLASAQ-RKMARGVA-WEMLGGPDLPAA------ELYDAIVARKT 168

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           G L   A   GA++             FG   G   Q+ADD+ D 
Sbjct: 169 GCLFSLAAAWGAMVTGKEDAVVAAFGEFGLAAGKAMQVADDIADL 213


>gi|296129905|ref|YP_003637155.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021720|gb|ADG74956.1| Polyprenyl synthetase [Cellulomonas flavigena DSM 20109]
          Length = 372

 Score =  111 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 89/247 (36%), Gaps = 31/247 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNV-----N 68
           +D  L   + +     +    +   L+ A+   + GGK++R+                  
Sbjct: 18  VDAALGRHVARLREEAERISPEAGALVDAVERMVAGGKRLRAAFCYWSWRAHGGTPGDGR 77

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------------QYD 112
               LR GAA+E     +L HDD+  MD+   RRG PT H                 ++ 
Sbjct: 78  EQGVLRAGAALELFQAAALFHDDV--MDDSSTRRGLPTAHRVFADEHAGSGRRGEPRRFG 135

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIR--SQLMLSLTHNIGLQGM---LGGQMLDI 167
           +  AI+ G+  L  + E ++     L  ++   +  + S        G    L  Q +  
Sbjct: 136 DGVAILLGDLALIASDEEMTRALAGLPVSVAQAAHSVFSSMRTEVTVGQYLDLVAQTMPW 195

Query: 168 QDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                DE +   + + K+    +      GA +A A        R  G  LG  FQL DD
Sbjct: 196 GTADDDERRAREVVRAKSARYSVEHPIVLGAALAGADDAAVAGCRAVGLPLGEAFQLRDD 255

Query: 227 LLDCEED 233
           LL    D
Sbjct: 256 LLGVLGD 262


>gi|119713545|gb|ABL97597.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
           bacterium EB0_39F01]
 gi|161170296|gb|ABX59266.1| short chain isoprenyl diphosphate synthase IdsA [uncultured marine
           bacterium EB000_55B11]
 gi|297183824|gb|ADI19947.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
          Length = 335

 Score =  111 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 8/197 (4%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           +A  +    GK +R+ +  + ASL  ++  T+L    A+E +H  SLIHDD+   D    
Sbjct: 47  AAFFHFKTPGKMLRAKMAIQSASLAEIDISTSLLWAGAVEVLHNASLIHDDIC--DGDKQ 104

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG+ ++ +++   TA+  G+ L+  +FE ++S   ++ +  R   +L+        G  
Sbjct: 105 RRGRESIWVKFGRDTALTLGDWLIALSFE-LASEAAEMSNTPRLVGVLARHMATTTAGQA 163

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
              M    +          I   KT  L+      G  +   +      +  +  +LG  
Sbjct: 164 ---MEFGWNSTQSWDVYLKIAADKTAPLLTAPIH-GVTLMSGTSGLGFAISGYFCDLGKA 219

Query: 221 FQLADDLLDCEE-DLPK 236
           +Q+A+D+ + +  D  K
Sbjct: 220 YQIANDIQNFKGTDGAK 236


>gi|329897187|ref|ZP_08271927.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
           IMCC3088]
 gi|328921342|gb|EGG28736.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
           IMCC3088]
          Length = 361

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 83/215 (38%), Gaps = 15/215 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +++ L +       Q    L    R +    GK +R  L    A  +  +   A    AA
Sbjct: 40  VEEGLERAFKTTVQQAPSSLREPCREHFKKRGKHLRGKLAYSAARQYGSSSQAASSWAAA 99

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  SL+HDDL   D    RRG+ T   QY E  A+  G+ L+  A+E  +    + 
Sbjct: 100 VELLHNASLVHDDLC--DKDSKRRGQQTTFRQYGEAVAVCLGDYLIAKAYEFAARAGAES 157

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-ETQVFMIQKMKTGALMCFACESGA 197
              + S +             +GGQ  +         ++   I   KT  L+       A
Sbjct: 158 LHLLSSSISAL----------VGGQAAEFASAGYPAWSEYEQIAVSKTAPLLGMGVVGAA 207

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++   S  E E L  +  +  + FQ+ +D+ +   
Sbjct: 208 LINQQSAPEAE-LEHYFYHAALCFQMINDIRNFSG 241


>gi|238490280|ref|XP_002376377.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
           flavus NRRL3357]
 gi|317145287|ref|XP_001820658.2| farnesyltranstransferase [Aspergillus oryzae RIB40]
 gi|220696790|gb|EED53131.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
           flavus NRRL3357]
          Length = 320

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 16/204 (7%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
                  +   + Y L  GGK IR  L+        +    A  +   +  +H  SL+ D
Sbjct: 27  PKSSEQIICGPLDYLLSSGGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLID 86

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   D+  +RRGKP  H  +     I + N     A + +SS  +   +++  + +L+L
Sbjct: 87  DIQ--DSSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNL 144

Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G+        L  +D      E Q   +   KTG L   A +   + ++ + +   
Sbjct: 145 HRGQGM-------DLHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVKLMQLESNQTCDCI- 196

Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
            L      LG IFQ+ DD+L+   
Sbjct: 197 PLTN---TLGTIFQIRDDILNLSG 217


>gi|83768519|dbj|BAE58656.1| unnamed protein product [Aspergillus oryzae]
          Length = 312

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 16/204 (7%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
                  +   + Y L  GGK IR  L+        +    A  +   +  +H  SL+ D
Sbjct: 19  PKSSEQIICGPLDYLLSSGGKNIRHKLMLAFNEWLQIPPEKAEIISEIVNLLHTASLLID 78

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   D+  +RRGKP  H  +     I + N     A + +SS  +   +++  + +L+L
Sbjct: 79  DIQ--DSSKLRRGKPVAHSIFGVAQTINSANYAYFLAQQKLSSLHSTRANDVFVEELLNL 136

Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G+        L  +D      E Q   +   KTG L   A +   + ++ + +   
Sbjct: 137 HRGQGM-------DLHWRDTLTCPTEEQYIGMVLDKTGGLFRLAVKLMQLESNQTCDCI- 188

Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
            L      LG IFQ+ DD+L+   
Sbjct: 189 PLTN---TLGTIFQIRDDILNLSG 209


>gi|203287773|ref|YP_002222788.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1]
 gi|201084993|gb|ACH94567.1| octaprenyl-diphosphate synthase [Borrelia recurrentis A1]
          Length = 348

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 96/242 (39%), Gaps = 24/242 (9%)

Query: 6   PSKLQENSKRIDTILD-----DLLLQTASHMQTQHNDRLLSAIRYAL-----LGGKKIRS 55
            S L +  K I+ I       +L       +     +  ++AI+  +      GGKKIR 
Sbjct: 4   KSFLDKIEKNINNIFSKDYFLNLFTDKNLKLTLNIQESTINAIQAPVIEIINRGGKKIRP 63

Query: 56  FLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
            L+   A        +     ++   +E  H  SLI DD+   D    RRGKP++H+ Y 
Sbjct: 64  MLMILLAHALGYNNSDTENLYKLSMLLELPHSGSLIIDDIE--DGALKRRGKPSIHLIYG 121

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQD 169
              +I   N +     ++I +   +    +    ++       L  +  GQ +D      
Sbjct: 122 LDNSINTANLIYFLPAKLIQTSNLKTSQKL----IIYENFFTTLSNLHLGQGIDITLHNG 177

Query: 170 EFI-DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            +I    +   + + KT +L   A     I+ + ++N+ + L     N+G  FQ+ DD+ 
Sbjct: 178 TYIPSIEEYISLVEHKTSSLFGMAGFLAGILTN-NENKAKNLYNTFLNIGTYFQMIDDIK 236

Query: 229 DC 230
           + 
Sbjct: 237 NI 238


>gi|182440724|ref|YP_001828443.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178469240|dbj|BAG23760.1| putative polyprenyl synthetase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 351

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 19/202 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK++R+                AL R  A++E IH  +++HDDL  +D+  +R G+PT H
Sbjct: 51  GKRLRAAFCYWGWRAAGQPDSDALVRAAASLELIHAAAVVHDDL--IDDSALRHGRPTAH 108

Query: 109 IQYDEVT-------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           I                   A++ G+ L+  A ++ ++         R++ + ++     
Sbjct: 109 IALRGAVRRRPRSVAAARSLAMLVGDLLMGMAGQLFTTSGLPAAYLGRARPLWTVLGREL 168

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFG 214
           + G     +    +   D      + + KT    +      G  +A A     E    +G
Sbjct: 169 IAGECLEILRTGAEP--DTAASLKVIRYKTAKYTVEQPLLIGGALAGAGARLCEGYSAYG 226

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
             LG  FQL DDLL    D  +
Sbjct: 227 LPLGEAFQLRDDLLGLFGDPGR 248


>gi|159040415|ref|YP_001539668.1| polyprenyl synthetase [Salinispora arenicola CNS-205]
 gi|157919250|gb|ABW00678.1| Polyprenyl synthetase [Salinispora arenicola CNS-205]
          Length = 384

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 92/258 (35%), Gaps = 27/258 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLL---LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           +   L +   E    +D  LDD L   + T + +        ++A    L GGK++R   
Sbjct: 25  VRASLAAYATEIVTAVDDTLDDFLSAEMDTLTAIDQAVGGFAVTARDSVLAGGKRVRPTF 84

Query: 58  VTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV------- 107
                             L   AA+E +H ++LIHDD+  MD+   RRG+PT        
Sbjct: 85  AYWGWRGVAGGGEPLPPVLPALAALELLHAFALIHDDV--MDSSATRRGRPTAHVAVAAQ 142

Query: 108 ---------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                      ++ E  AI+ G+  L +A  +++         +  +          + G
Sbjct: 143 HAAAGRRGDPGKFGETVAILVGDLCLVWADRLLARAALPPARLLEVRRCYDQMRVETIAG 202

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAH--ASQNEKERLRCFGE 215
                + +         +   + + KT    + +    GA +A   A          +G 
Sbjct: 203 QYLDVLGESDPTNWSVDRALQVARYKTASYTVQWPLLFGARLAGVVAEPPLIAAYTRYGL 262

Query: 216 NLGIIFQLADDLLDCEED 233
            +G  FQL DDLL    D
Sbjct: 263 AVGEAFQLCDDLLGVYGD 280


>gi|17481240|dbj|BAB79204.1| farnesyl diphosphate synthase [Rhodobacter sp. AP-10]
          Length = 137

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 8/130 (6%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG+PTVH+++DEVTA++AG+ L T AFE+   P     D  R +L+ +L    G++GM
Sbjct: 12  LRRGQPTVHVKWDEVTAVLAGDALQTLAFELCCDPAMGPADR-RIELVAALARASGVEGM 70

Query: 160 LGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LDI  E     +   ++  +Q  KTGAL+ FA E+GAI+A A    +  LR + +
Sbjct: 71  VHGQALDIAAESAGRPLTLEEITALQAGKTGALIVFAAEAGAILAGAD---RAPLRRYAQ 127

Query: 216 NLGIIFQLAD 225
            LG+ FQ+AD
Sbjct: 128 ALGLAFQIAD 137


>gi|126306988|ref|XP_001368888.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1
           [Monodelphis domestica]
          Length = 299

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 16/202 (7%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
             +Q      LL   RY L L GK++R+ L         V       +    E +H  SL
Sbjct: 2   EEVQKTSERILLEPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKTQIIIEVTEMLHNASL 61

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+   DN  +RRG P  H  Y   + I + N +     E + +        + ++ +
Sbjct: 62  LIDDIE--DNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQL 119

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           L L    GL        +  +D +    E +   +   KTG L   A     + ++  ++
Sbjct: 120 LELHQGQGL-------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSNYKED 172

Query: 206 EKERLRCFGENLGIIFQLADDL 227
            K  L      LG+ FQ+ DD 
Sbjct: 173 LKPLLDT----LGLFFQIRDDY 190


>gi|294633680|ref|ZP_06712238.1| polyprenyl synthetase [Streptomyces sp. e14]
 gi|292830322|gb|EFF88673.1| polyprenyl synthetase [Streptomyces sp. e14]
          Length = 304

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 102/250 (40%), Gaps = 25/250 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
            G+  +L    +R D    D    + +      +   + L      +L GGK++R  L+ 
Sbjct: 7   AGVHERLAGYRERFDARFADYFDTIARQRLPRGSFAPEALELVRDMSLRGGKRLRVALLY 66

Query: 60  ECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE----- 113
           E A L   + +  L     +IE +  + LIHDD+  +D+  +RRG  +V+  Y E     
Sbjct: 67  EAARLVTSDAVAGLEEAALSIELLQTHGLIHDDI--VDDSPVRRGAASVYYAYRERFADR 124

Query: 114 -----VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  A++AG+     +  ++ +           +  ++          + GQ+LD++
Sbjct: 125 PQTALGLAVLAGDLAAFLSVRVLLTAPVPRD----LRQAMAAVQATAGADTVVGQILDLE 180

Query: 169 DEF---IDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQL 223
            +F    D   + ++ + K+    +    + G + A A     E+ L  +   +GI  Q+
Sbjct: 181 RDFGPLPDRATLDLVSEYKSARYSVLAPLQLGLLAAGADPAAHEKELARYATLVGISGQM 240

Query: 224 ADDLLDCEED 233
            DD LD   D
Sbjct: 241 CDDYLDLFAD 250


>gi|328714372|ref|XP_001947385.2| PREDICTED: geranylgeranyl pyrophosphate synthase-like
           [Acyrthosiphon pisum]
          Length = 327

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 16/209 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D   +  S     H  +LL    Y + + GK+IR+ L         +       +G  ++
Sbjct: 18  DRNWEIVSLKPQFHIIKLLQPFTYIMQVPGKQIRAKLAHAFNYWLKIPSDKLAVIGDIVQ 77

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I A N +   A E   S    +  
Sbjct: 78  MLHNSSLLTDDIQ--DNSVLRRGIPVAHSIYGVASTINAANYMSFVALERTLSLGHPMAT 135

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    G++       +  +D +    E +   +   KTG L   A     +
Sbjct: 136 TVYTEQVLELHRGQGME-------IYWRDNYTCPTEDEYKKMTIRKTGGLFMLAIRLMQL 188

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227
            +  S N+  +L      LG+ FQ+ DD 
Sbjct: 189 FSD-STNDFTKLTGI---LGLYFQIRDDY 213


>gi|326781397|ref|ZP_08240662.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326661730|gb|EGE46576.1| Polyprenyl synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 351

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 19/202 (9%)

Query: 50  GKKIRSFLVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK++R+                AL R  A++E IH  +++HDDL  +D+  +R G+PT H
Sbjct: 51  GKRLRAAFCYWGWRAAGQPDSDALVRAAASLELIHAAAVVHDDL--IDDSALRHGRPTAH 108

Query: 109 IQYDEVT-------------AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           I                   A++ G+ L+  A ++ ++         R++ + ++     
Sbjct: 109 IALRGAVRRRPRSVAAARSLAMLVGDLLMGMAGQLFTTSGLPAAYLGRARPLWTVLGREL 168

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFG 214
           + G     +    +   D      + + KT    +      G  +A A     E    +G
Sbjct: 169 IAGECLEILRTGAEP--DTAASLKVIRYKTAKYTVEQPLLIGGALAGAGARLCEGYSAYG 226

Query: 215 ENLGIIFQLADDLLDCEEDLPK 236
             LG  FQL DDLL    D  +
Sbjct: 227 LPLGEAFQLRDDLLGLFGDPGR 248


>gi|209525923|ref|ZP_03274457.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
 gi|209493600|gb|EDZ93921.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
          Length = 177

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHL---T 71
           ++  L  LL      +    +  L +A  +   + GK++R  +V   +     +H     
Sbjct: 11  VEADLK-LLTDNLKQLVGARHPILYAAAEHLFSVQGKRVRPAIVLLISRATMPDHEIIPK 69

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
             R+    E IH  SL+HDD+  +D   +RRG PTVH  ++   A++AG+ L   +   +
Sbjct: 70  HRRLAEITEMIHTASLVHDDV--VDESELRRGVPTVHSLFNNRVAVLAGDFLFAQSSWYL 127

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           ++        + SQ+++ L            Q L+  D  +       
Sbjct: 128 ANLDNLEVVKLLSQVIMDLAEGEI------QQGLNRFDTSLSIEAYLE 169


>gi|213510982|ref|NP_001135248.1| Geranylgeranyl pyrophosphate synthetase [Salmo salar]
 gi|209155246|gb|ACI33855.1| Geranylgeranyl pyrophosphate synthetase [Salmo salar]
          Length = 309

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 17/201 (8%)

Query: 31  MQTQHNDR-LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           M +   +R LL   +Y L L GK++R+ L        NV       +    E +H  SL+
Sbjct: 5   MDSAGPERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLL 64

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
            DD+   D+  +RRG P  H  Y   + I + N +     E + +       ++ ++ +L
Sbjct: 65  IDDIE--DSSTLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVHVFTRQLL 122

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L    GL        +  +D +    E+Q   +   KTG L   A     + +   ++ 
Sbjct: 123 ELHRGQGL-------DIHWRDTYTCPTESQYRTMVLQKTGGLFGLAVGLMQLFSGWKRDL 175

Query: 207 KERLRCFGENLGIIFQLADDL 227
           K  L      LG+ FQ+ DD 
Sbjct: 176 KPLLDT----LGLFFQIRDDY 192


>gi|110776978|ref|XP_001122899.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like, partial
           [Apis mellifera]
          Length = 310

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 16/210 (7%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
            D ++  +     + ++ LL    Y L + GK+IR+ L         +       +G  I
Sbjct: 3   KDKIVPYSRTGNKEEDEILLEPYNYILQVPGKQIRATLAHAFNYWLKIKSDKLRDIGDII 62

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           + +H  SL+ DD+   DN  +RRG P  H  Y   + + A N  +  A E + +      
Sbjct: 63  QLLHNASLLIDDIQ--DNSVLRRGIPVAHNIYGVASTMNAANYAIFIALEKVLALNHVEG 120

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
             I  + +L L    G++       +  +D +I   E     +   KTG L   A     
Sbjct: 121 IQIYLEQLLELHRGQGME-------IYWRDNYICPTEAAYKQMTIQKTGGLFNLAVRLMQ 173

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDL 227
           + +   ++    L      LG+ FQ+ DD 
Sbjct: 174 LFSECKEDFV-PLTSI---LGLYFQIRDDY 199


>gi|156740413|ref|YP_001430542.1| polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231741|gb|ABU56524.1| Polyprenyl synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 317

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 11/222 (4%)

Query: 17  DTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKK--IRSFLVTECASLFNVNHLTAL 73
           D I+ DL  ++   H + Q    +      AL G +K  +R+ LV   A L   +    +
Sbjct: 11  DEIVGDLAKVEQVIHARMQGRPIVAQTASAALRGMEKPYLRAALVVLAARLGRYDARRVI 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
              AA E IH  + +HD+L  ++    RRG+P    +++   A+++G+ LL  A   ++ 
Sbjct: 71  HAAAAAELIHFATAVHDNL--INEAARRRGQPIGDQRWNGDVALMSGDYLLALAASEMAL 128

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                  ++ S+++++              +           Q   + + +T AL   A 
Sbjct: 129 APDARIISMYSRVVMTFCEGRLAPVTAVAPLDQA------LAQHEYVVESRTAALFETAA 182

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             G +   +       L  FG  LG+   +A ++ D E D P
Sbjct: 183 RVGVVCGGSDDTLSNTLGRFGRELGMAMHIAAEVRDYEIDGP 224


>gi|237749809|ref|ZP_04580289.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879]
 gi|229374559|gb|EEO24950.1| octaprenyl-diphosphate synthase [Helicobacter bilis ATCC 43879]
          Length = 421

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 14/178 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           D + + A+ M    N      +   L  GK +RS LV        V+   A R+ A IE 
Sbjct: 4   DRIAKLATEMIADINSDEALTLYKHLESGKMLRSKLVLSV-----VDSDEAYRLCAVIEL 58

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           I   SL+HDD+  +D+  +RRGKP+++ Q+    AI+ G+ L + AF  +S     +   
Sbjct: 59  IQSASLLHDDV--IDSSDLRRGKPSLNAQFGNKNAIMLGDILYSRAFFELSHFPKSI--- 113

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             +Q +      + +  +    +    +E+  E +   +   K+ +L+  + E  A++
Sbjct: 114 --AQSLSKSVVELSVGELEDVNLEQSFNEY--EEKYLSMIGHKSASLIAASAECAALL 167



 Score = 57.5 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           S++  +    +G NLG+ FQ+ DD+LD  +D  K
Sbjct: 292 SKDIHKLYYDYGFNLGMAFQIIDDILDITQDSTK 325


>gi|239928994|ref|ZP_04685947.1| polyprenyl synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 308

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 80/191 (41%), Gaps = 15/191 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK IR  LV   AS    +      V AA   E +H ++L+HDD+  MD    RR +PT 
Sbjct: 67  GKAIRPALVLAAASALGGSEARRAAVRAAAAVELVHNFTLLHDDV--MDRDTTRRHRPTA 124

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              + +  AI+AG+           +     +D   +    +      +  +  GQ  D 
Sbjct: 125 WTVFGDADAILAGDA------LQALALGLLAEDPHPAAPAAAARLAHCVVELCAGQHTDT 178

Query: 168 QDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             E      +   +   + + KTGAL+  AC  GA+ A A   +   L  FG   G+ FQ
Sbjct: 179 AMERRGPGEVTLAETLTMAEAKTGALLGCACAIGALYADAEDADVAALDAFGREAGLAFQ 238

Query: 223 LADDLLDCEED 233
           L DD++    D
Sbjct: 239 LIDDVIGIWGD 249


>gi|308370103|ref|ZP_07420299.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu002]
 gi|308370565|ref|ZP_07422005.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu003]
 gi|308371822|ref|ZP_07426360.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu004]
 gi|308372989|ref|ZP_07430673.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu005]
 gi|308374160|ref|ZP_07435075.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu006]
 gi|308375313|ref|ZP_07443508.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu007]
 gi|308376574|ref|ZP_07439328.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu008]
 gi|308377573|ref|ZP_07479700.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu009]
 gi|308325351|gb|EFP14202.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu002]
 gi|308331528|gb|EFP20379.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu003]
 gi|308335332|gb|EFP24183.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu004]
 gi|308339139|gb|EFP27990.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu005]
 gi|308342810|gb|EFP31661.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu006]
 gi|308346663|gb|EFP35514.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu007]
 gi|308350578|gb|EFP39429.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu008]
 gi|308355269|gb|EFP44120.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu009]
          Length = 333

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 17  DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 69

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 70  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 127

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 128 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 178 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 235


>gi|187918188|ref|YP_001883751.1| dimethylallyltransferase [Borrelia hermsii DAH]
 gi|119861036|gb|AAX16831.1| dimethylallyltransferase [Borrelia hermsii DAH]
          Length = 348

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 14/196 (7%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNV---NHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  L+   A        N     ++   +E  H  SLI DD+   D  
Sbjct: 50  AIEIINRGGKRIRPMLMILLAYALGYNNSNTKNLYKLSMLLELPHSGSLIIDDIE--DGA 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRGKP +H+ Y    +I   N +     ++I +   +       QL++       L  
Sbjct: 108 IKRRGKPAIHLIYGLDNSINTANLIYFLPAKLIQTANLKTS----QQLLIYENFFTTLSN 163

Query: 159 MLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  GQ +DI            +   + ++KT +L   A     I+ + ++N+ + L    
Sbjct: 164 LHLGQGIDIAFHNGTYIPNVEEYISLVELKTSSLFGMAGFLAGILTN-NENKAKNLYNTF 222

Query: 215 ENLGIIFQLADDLLDC 230
             LG  FQ+ DD+ + 
Sbjct: 223 MKLGTCFQIIDDIKNI 238


>gi|238586537|ref|XP_002391204.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553]
 gi|215455564|gb|EEB92134.1| hypothetical protein MPER_09404 [Moniliophthora perniciosa FA553]
          Length = 276

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 12/224 (5%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTA 72
           K  DT+L+ L   +      ++   ++    Y     GK IRS  +        V     
Sbjct: 5   KLYDTLLERL--SSEWEWSQKNESCIMEPYTYITSNPGKDIRSQFIAAFNLWLTVPEEKT 62

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +   +  +H  SL+ DD+   DN  +RRG P  H  Y     I   N +   AF+ IS
Sbjct: 63  KAIARVVNMLHSASLLIDDIQ--DNSQLRRGSPVAHKIYGVPQTINTANYVYFLAFQEIS 120

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGAL 188
             + +   + +   + ++  +  L  +  GQ LD+          E +   +   KTG L
Sbjct: 121 KLREEDAKSRQGPDVDAIVTDE-LLSLHRGQGLDLFWRDSLQCPTEDEYIGMVNNKTGGL 179

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +    +   +MA A+ N           +G+ FQ+ DDLL+   
Sbjct: 180 LRIGIKL--MMAMATTNVSVNYVPLVNLIGVYFQIRDDLLNLSS 221


>gi|157834060|pdb|1UBX|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
          Length = 367

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 81/234 (34%), Gaps = 23/234 (9%)

Query: 18  TILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
            I+ DL      H +      RL   ++Y   GGK  R   V       +          
Sbjct: 37  QIVRDLTEDGIGHPEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESL 96

Query: 72  --ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAF 128
             AL VG  IE     SL+ DD+  MD    RRG+   + +      AI     L +  +
Sbjct: 97  RCALAVGWCIELFQAASLVADDI--MDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVY 154

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------FIDETQVFMIQ 181
            ++   K   +       +L L      Q  LG  +  I             E +   I 
Sbjct: 155 RVL---KKYCRQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIV 211

Query: 182 KMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K KT     +   + A+  +   S+ E E  +     +G  FQ+ DD LDC  D
Sbjct: 212 KYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGD 265


>gi|257068597|ref|YP_003154852.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
 gi|256559415|gb|ACU85262.1| geranylgeranyl pyrophosphate synthase [Brachybacterium faecium DSM
           4810]
          Length = 377

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 87/248 (35%), Gaps = 30/248 (12%)

Query: 14  KRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLVTECA-SLFNVNHL 70
            RI  I    L     H+     +  +L  A+   L GGK +R         S       
Sbjct: 22  DRISEITRSELSSRRDHLAEISPETAQLADALLEYLDGGKLLRPRFCFWGGVSALGREPT 81

Query: 71  TA-----LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ--------------- 110
            A      R G AIE +   +L+HDD+  +D+  +RRG+P +H+Q               
Sbjct: 82  EAEIDALARYGTAIELVQAAALMHDDV--IDHSPVRRGRPALHVQAERRHRAEELAGSAE 139

Query: 111 -YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM---LGGQMLD 166
            Y    AI+ G+  L++A +I S  +        +           + G    +  Q   
Sbjct: 140 DYGVAVAIVLGDLALSWAEQIASGVEGSPGAVAAAHREFDALRTEVMSGQFLDILHQAGG 199

Query: 167 IQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                  E     + + KT    +      GA +  A     E L  +   +G  FQL D
Sbjct: 200 FSSAPDAEQAALSVIRWKTVPYTVLRPVRIGAALLGADHTALETLSAWAIEVGTAFQLRD 259

Query: 226 DLLDCEED 233
           DLL    D
Sbjct: 260 DLLSVVGD 267


>gi|302554072|ref|ZP_07306414.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
 gi|302471690|gb|EFL34783.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
          Length = 389

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 15/191 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAI--ECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           GK IR  LV   A+    +   A  V AA   E +H ++L+HDD+  MD    RR +PT 
Sbjct: 103 GKAIRPALVLAAAAALGGSEARAGAVRAAAAVELVHNFTLLHDDV--MDRDATRRHRPTA 160

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              + +  AI+AG+           + +   +D   +    +      +  +  GQ  D 
Sbjct: 161 WTVFGDEGAILAGD------TLQALALRLLAQDPHPAAPAAAALLADCVVELCAGQYADT 214

Query: 168 QDEF-----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
             E      +   +V  + + KTGAL+  AC  G + A A   +   L  FG   G+ FQ
Sbjct: 215 ALERRGPADVTLDEVLAMAEAKTGALLGSACAIGGLYAGAGDADVAALDAFGREAGLAFQ 274

Query: 223 LADDLLDCEED 233
           L DD++    D
Sbjct: 275 LIDDVIGIWGD 285


>gi|331251210|ref|XP_003338205.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|309317195|gb|EFP93786.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 503

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 12/212 (5%)

Query: 27  TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
            A  ++      LL    Y     GK+IRS ++       +V       V   +  +H  
Sbjct: 189 QAEILRCVSVKILLEPFTYLTSTPGKEIRSMMIDAFNHWLSVPTEQLNIVKRIVGLLHTA 248

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   D   +RRG P  H  Y     I + N +   A++ +S        +  + 
Sbjct: 249 SLLMDDVE--DGSELRRGIPVAHKIYGIPQTINSANYVYFLAYQELSMLHPSQDSSASNL 306

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAH 201
             L    N  L  +  GQ +D+          E +   + K KTG L   A +   +MA 
Sbjct: 307 WKLI---NEELLRLHRGQGMDLYWRDSLTCPTEEEYIQMVKNKTGGLFRIAIKL--MMAM 361

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   +        + +GIIFQ+ DDLL+   D
Sbjct: 362 SPLQQIPDYVPLVDLIGIIFQIRDDLLNLSSD 393


>gi|215426267|ref|ZP_03424186.1| polyprenyl synthetase [Mycobacterium tuberculosis T92]
          Length = 331

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 15  DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 67

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 68  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 126 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 176 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 233


>gi|215402805|ref|ZP_03414986.1| polyprenyl synthetase [Mycobacterium tuberculosis 02_1987]
          Length = 331

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 15  DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 67

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 68  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 126 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 176 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 233


>gi|157834058|pdb|1UBV|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
 gi|157834059|pdb|1UBW|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
 gi|157834061|pdb|1UBY|A Chain A, Structure Of Farnesyl Pyrophosphate Synthetase
          Length = 367

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 81/234 (34%), Gaps = 23/234 (9%)

Query: 18  TILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
            I+ DL      H +      RL   ++Y   GGK  R   V       +          
Sbjct: 37  QIVRDLTEDGIGHPEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESL 96

Query: 72  --ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAF 128
             AL VG  IE     SL+ DD+  MD    RRG+   + +      AI     L +  +
Sbjct: 97  RCALAVGWCIELFQAASLVADDI--MDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVY 154

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------FIDETQVFMIQ 181
            ++   K   +       +L L      Q  LG  +  I             E +   I 
Sbjct: 155 RVL---KKYCRQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIV 211

Query: 182 KMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K KT     +   + A+  +   S+ E E  +     +G  FQ+ DD LDC  D
Sbjct: 212 KYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGD 265


>gi|254231286|ref|ZP_04924613.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           C]
 gi|124600345|gb|EAY59355.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           C]
          Length = 333

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 17  DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 69

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 70  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 127

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 128 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 178 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 235


>gi|215410588|ref|ZP_03419396.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           94_M4241A]
 gi|298524483|ref|ZP_07011892.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|298494277|gb|EFI29571.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 325

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 9   DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 62  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 120 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 170 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227


>gi|167968055|ref|ZP_02550332.1| polyprenyl synthetase [Mycobacterium tuberculosis H37Ra]
          Length = 331

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 15  DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 67

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 68  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 126 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 175

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 176 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 233


>gi|308231691|ref|ZP_07413460.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu001]
 gi|308378784|ref|ZP_07483890.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu010]
 gi|308379930|ref|ZP_07488129.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu011]
 gi|308397859|ref|ZP_07492630.2| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu012]
 gi|308216330|gb|EFO75729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu001]
 gi|308359223|gb|EFP48074.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu010]
 gi|308363135|gb|EFP51986.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu011]
 gi|308366792|gb|EFP55643.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           SUMu012]
          Length = 333

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 17  DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 69

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 70  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 127

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 128 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 178 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 235


>gi|320096193|ref|ZP_08027782.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319976874|gb|EFW08628.1| polyprenyl synthetase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 364

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 83/232 (35%), Gaps = 34/232 (14%)

Query: 32  QTQHNDRLLSAIRYALLGGKKIRSFLVTE---CASLFNVNHLTALRVGAAIECIHCYSLI 88
            TQ    L S  R    GGK+ R  L       A    ++      + AA+E     +L 
Sbjct: 32  PTQRGAPLASLARSCSEGGKRFRGILAHVGHCLARGGPLDEAPVAPLSAALELYQASALA 91

Query: 89  HDDLPSMDNGYIRRGKPTVHI----------------QYDEVTAIIAGNGLLTYAFEIIS 132
           HDD+  +D+   RRG+PT H+                ++ E  AI+ G+ L ++A   ++
Sbjct: 92  HDDI--IDHARTRRGRPTPHVSLAALHHDRAWRGDPDRFGEAGAILVGDLLFSWAEAAMA 149

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----------FIDETQVFMIQK 182
               +L     ++L    +       +  GQ LD+  E           +D      +  
Sbjct: 150 DQADRLAPRDAARLWARYSRMHA--EVALGQFLDVAAEQAPLDPGDPGAMDTEAAMEVVV 207

Query: 183 MKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            K+    +      GAI   A       +       G+ FQL DD L    D
Sbjct: 208 RKSARYSIVHPAALGAICGGADDALITAIESILTPWGMAFQLRDDHLGVFGD 259


>gi|31792180|ref|NP_854673.1| polyprenyl-diphosphate synthase [Mycobacterium bovis AF2122/97]
 gi|121636916|ref|YP_977139.1| putative polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148822198|ref|YP_001286952.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           F11]
 gi|215429849|ref|ZP_03427768.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           EAS054]
 gi|215445137|ref|ZP_03431889.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T85]
 gi|218752659|ref|ZP_03531455.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           GM 1503]
 gi|224989388|ref|YP_002644075.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253799983|ref|YP_003032984.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 1435]
 gi|254363907|ref|ZP_04979953.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254549973|ref|ZP_05140420.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260200016|ref|ZP_05767507.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T46]
 gi|289442409|ref|ZP_06432153.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T46]
 gi|289555229|ref|ZP_06444439.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 605]
 gi|289749517|ref|ZP_06508895.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T92]
 gi|289753047|ref|ZP_06512425.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           EAS054]
 gi|289757072|ref|ZP_06516450.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T85]
 gi|289761123|ref|ZP_06520501.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           GM 1503]
 gi|297633514|ref|ZP_06951294.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 4207]
 gi|297730499|ref|ZP_06959617.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN R506]
 gi|313657828|ref|ZP_07814708.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN V2475]
 gi|31617768|emb|CAD93877.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL
           PYROPHOSPHATE SYNTHETASE) [Mycobacterium bovis
           AF2122/97]
 gi|121492563|emb|CAL71031.1| Probable polyprenyl-diphosphate synthase grcC2 [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|134149421|gb|EBA41466.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148720725|gb|ABR05350.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           F11]
 gi|224772501|dbj|BAH25307.1| putative polyprenyl-diphosphate synthase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253321486|gb|ACT26089.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 1435]
 gi|289415328|gb|EFD12568.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T46]
 gi|289439861|gb|EFD22354.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 605]
 gi|289690104|gb|EFD57533.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T92]
 gi|289693634|gb|EFD61063.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           EAS054]
 gi|289708629|gb|EFD72645.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           GM 1503]
 gi|289712636|gb|EFD76648.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           T85]
 gi|326904785|gb|EGE51718.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           W-148]
 gi|328459725|gb|AEB05148.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           KZN 4207]
          Length = 325

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 9   DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 62  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 120 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 170 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227


>gi|289744725|ref|ZP_06504103.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           02_1987]
 gi|289685253|gb|EFD52741.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           02_1987]
          Length = 325

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 9   DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 62  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 120 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 170 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227


>gi|229583172|ref|YP_002841571.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228013888|gb|ACP49649.1| Polyprenyl synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 281

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 23/220 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E    ID +++  L        +  +  L+    Y L  GK+ R  L          +  
Sbjct: 9   EAKTTIDKLIEQFL-------NSNRDWDLVDISTYILKDGKRFRGTLNMFFTVALGGDIK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +     AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  I
Sbjct: 62  DSYGGALAIEILHSASLALDDI--VDLDVTRRGDKAAWVIYGNRKVIFITNYLIPTALRI 119

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I +       N   + +   T    L+ M             D        ++KTG+L  
Sbjct: 120 IQTSYGDDALNTSIE-LWKDTSVGALRDM------------YDNNDYIRTIELKTGSLFK 166

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    A  +    N K+++   G+ LGII+Q+ DD +D 
Sbjct: 167 LSTVLSAYASKH-YNTKQQMLDVGKYLGIIYQIIDDFVDY 205


>gi|156839045|ref|XP_001643218.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113818|gb|EDO15360.1| hypothetical protein Kpol_457p11 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 332

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 86/217 (39%), Gaps = 16/217 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L++      + + D + S   Y A   GK  RS LV      + ++    L +   +  +
Sbjct: 7   LVEGKPIWSSDYEDIVQSPYNYLAQQPGKNFRSLLVKTFNQFYGLDEEQILLIDKLVGIL 66

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP------KT 136
           H  SL+ DD+   DN  IRRG  T H++Y     I + N +   A E++          +
Sbjct: 67  HTASLLIDDIE--DNSVIRRGMETAHLKYGIPMTINSANYMYFKAMEVLQDISKLHIKDS 124

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGALMC 190
              D+      L +  N  L  +  GQ LDI           DE   F +   KTG L  
Sbjct: 125 PQIDHNVLLKELMIIFNEELINLHRGQALDIYWRDTFPEIIPDEDMYFNMVMNKTGGLFR 184

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            A      +   S  + + L      LGI++Q+ DDL
Sbjct: 185 LAVRIMETLNGNS-KDSKSLVPLANLLGILYQVRDDL 220


>gi|15608129|ref|NP_215504.1| polyprenyl-diphosphate synthase [Mycobacterium tuberculosis H37Rv]
 gi|148660770|ref|YP_001282293.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis
           H37Ra]
 gi|2052123|emb|CAB08149.1| PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC2 (POLYPRENYL
           PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis
           H37Rv]
 gi|148504922|gb|ABQ72731.1| polyprenyl-diphosphate synthase GrcC2 [Mycobacterium tuberculosis
           H37Ra]
          Length = 325

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 9   DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 62  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 120 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 170 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227


>gi|134100861|ref|YP_001106522.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291003525|ref|ZP_06561498.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133913484|emb|CAM03597.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 337

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/244 (27%), Positives = 101/244 (41%), Gaps = 24/244 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTAS--------HMQTQHNDRLLSAIRYALLGGKK 52
           M   LP+ L      +D  L  ++ +           H    + D   +       GGK 
Sbjct: 1   MTSTLPAALTAARTAVDPELRKVIGKLDPDTRGVCEYHFGWTNADGSPNG-----GGGKA 55

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R  LV   A     N   A+   AA+E +H +SL+H     +D    RR +PT    + 
Sbjct: 56  LRPALVLLSAQAVAPNGAQAVPAAAAVELVHNFSLLH--DDLLDGDTSRRHRPTAWTVFG 113

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF- 171
              A++AG+ LL  A E++    +   D I S   L       ++ ++ GQ  D+  E  
Sbjct: 114 RPAALLAGDALLGLATEVLLDSTSG--DAIASARALC----AAVRSLIAGQNADLDFEHR 167

Query: 172 --IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             +   +   +   KT AL+  +   GA+   A +   ERL  FG  LG+ FQL DDLL 
Sbjct: 168 ADVTLDECLHMADEKTSALLACSTSIGALHVGAPRETVERLHAFGSELGMAFQLVDDLLG 227

Query: 230 CEED 233
              D
Sbjct: 228 LWGD 231


>gi|226372050|gb|ACO51650.1| Geranylgeranyl pyrophosphate synthetase [Rana catesbeiana]
          Length = 299

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK+IR+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKTQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +       N+ +Q +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLNHPDAVNVFTQQLLELHRGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    ET+   +   KTG L   A     + + + ++ K  L     
Sbjct: 129 ------DIYWRDTYTCPTETEYKSMVLQKTGGLFGLAVGLMQLFSSSKKDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|90580459|ref|ZP_01236265.1| Dimethylallyltransferase [Vibrio angustum S14]
 gi|90438368|gb|EAS63553.1| Dimethylallyltransferase [Vibrio angustum S14]
          Length = 298

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 10/181 (5%)

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           R+ +    A    +N  TA  +   +E +H  SLIHDD+   D    RRG+  + ++   
Sbjct: 54  RAKICYITAVSLGLNTNTAKLLAVTVELLHNASLIHDDVQ--DKDQKRRGQDALWVKASV 111

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-FI 172
             AI  G+ L+  A+  +S   T    ++++      T    +   + GQM D+  +  +
Sbjct: 112 EEAICLGDTLIVAAYHALSKINTPANSHLQA------TVCRRVMETIRGQMDDLSPQLPL 165

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            E    +I   K   L+  + E  A++A    +  + L     +  + +Q  DDL D  +
Sbjct: 166 TEQSYTLIATNKAAPLLSLSVELPALLAG-EPSLAKALSNAASSFALAYQFYDDLCDQAQ 224

Query: 233 D 233
           D
Sbjct: 225 D 225


>gi|62858985|ref|NP_001017122.1| geranylgeranyl diphosphate synthase 1 [Xenopus (Silurana)
           tropicalis]
 gi|89273784|emb|CAJ82104.1| ggps1 [Xenopus (Silurana) tropicalis]
 gi|111309089|gb|AAI21538.1| hypothetical protein LOC549876 [Xenopus (Silurana) tropicalis]
          Length = 296

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK+IR+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQIRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +       ++ +Q +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPNAVHVFTQQLLELHRGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSSYDKDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|291243150|ref|XP_002741463.1| PREDICTED: geranylgeranyl diphosphate synthase 1-like [Saccoglossus
           kowalevskii]
          Length = 310

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL    Y   + GK+IR  L        N+       +G  ++ +H  SL+ DD+   DN
Sbjct: 24  LLEPFHYLRQVPGKEIRMKLTQGFNHWLNIPEEKLHVIGEVVQMLHNASLLIDDIE--DN 81

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y     I   N +   A + + +        + ++ +LSL    G+ 
Sbjct: 82  SKLRRGIPVAHNIYGIPHTINCANYVFFLALQKLLNLNNAQVTQVYTEQLLSLHEGQGM- 140

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D ++   E +   +   KTG L         I +    + K       E
Sbjct: 141 ------DIWWRDAYVCPTEEEYKDMVIKKTGGLFGLGIRLMQIFSENKCDFKPLW----E 190

Query: 216 NLGIIFQLADDL 227
           NLG+ FQ+ DD 
Sbjct: 191 NLGLYFQIRDDY 202


>gi|260575018|ref|ZP_05843019.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp.
           SW2]
 gi|259022640|gb|EEW25935.1| Geranylgeranyl pyrophosphate synthase-like protein [Rhodobacter sp.
           SW2]
          Length = 419

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 13/199 (6%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECAS 63
             + L E   R    + D +L+   + Q Q +  L S +R Y    GK +R  LV     
Sbjct: 207 FDNDLMETMARCKARVVDEILRLIPNKQPQRD--LYSLMRDYVQREGKGLRPTLVIATCM 264

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    +R  AA+E  H   L+HDD+   D    RRG PT+H+ +    A+ AG+G+
Sbjct: 265 ALGGRFEDGVRAAAALEMFHNGFLVHDDIA--DESTHRRGLPTLHMSHGIGLAVNAGDGM 322

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVF 178
             +A ++  S    +       ++  + H    +  + GQ +++     +     +    
Sbjct: 323 HLFAVDMTLSNLQSVGLARTLGIIHEILH--MCRETVEGQAIELGWIRRNFVPARDADYS 380

Query: 179 MIQKMKTGALMCFA-CESG 196
            +   KTG   C + C  G
Sbjct: 381 RMSTKKTGWYTCISPCRVG 399


>gi|310287739|ref|YP_003938997.1| Polyprenyl synthetase [Bifidobacterium bifidum S17]
 gi|311064626|ref|YP_003971351.1| polyprenyl synthase IdsA [Bifidobacterium bifidum PRL2010]
 gi|309251675|gb|ADO53423.1| Polyprenyl synthetase [Bifidobacterium bifidum S17]
 gi|310866945|gb|ADP36314.1| IdsA Polyprenyl synthase [Bifidobacterium bifidum PRL2010]
          Length = 365

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 96/262 (36%), Gaps = 41/262 (15%)

Query: 5   LPSKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTE 60
           + S L     RI   +D  + L     ++           R AL+   GGK++R+ L   
Sbjct: 3   VSSDLALIESRIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLALH 62

Query: 61  CASLFNVN-----------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                +                 L +  AIE     +L+HDD+  +D+  +RRGKP  H 
Sbjct: 63  AFDATDPQGHDDDDAHARGRDAVLDLACAIEVFQTAALVHDDI--IDDSDLRRGKPAAHK 120

Query: 110 QYDE---------VTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
                           I+ G+ L T + +I  ++ +   + ++     L +   + +   
Sbjct: 121 ALGTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEI--- 177

Query: 160 LGGQMLDIQDEFIDETQVFM-------IQKMKTGALMCFACESGAIMAHASQNEKERLR- 211
             GQ+LD+  E     +          + + KT +    A    A++A      +     
Sbjct: 178 --GQVLDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADA 235

Query: 212 -CFGENLGIIFQLADDLLDCEE 232
              G  LG  FQLADDLLD   
Sbjct: 236 MAIGLPLGQAFQLADDLLDVIG 257


>gi|119953112|ref|YP_945322.1| dimethylallyltransferase [Borrelia turicatae 91E135]
 gi|119861883|gb|AAX17651.1| dimethylallyltransferase [Borrelia turicatae 91E135]
          Length = 348

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 14/196 (7%)

Query: 42  AIRYALLGGKKIRSFLVTECASLFNVNH---LTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           AI     GGK+IR  L+   A     N        ++   +E  H  SLI DD+   D  
Sbjct: 50  AIEIINRGGKRIRPMLMILLAYALGYNKKNTENLYKLSMLLELPHSGSLIIDDIE--DGA 107

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRGKP +H+ Y    +I   N +     ++I + K +    +    ++       L  
Sbjct: 108 IKRRGKPAIHLIYGLDNSINTANLIYFLPAKLIQTSKLKKSQKL----LIYENFFTTLSN 163

Query: 159 MLGGQMLD---IQDEFI-DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +  GQ +D       +I +  +   + ++KT  L   A     I+ + ++++ + L    
Sbjct: 164 LHLGQGIDIALHNGTYIPNLDEYISLVELKTSCLFGMAGFLAGILTN-NESKAKNLYNTF 222

Query: 215 ENLGIIFQLADDLLDC 230
             LG  FQ+ DD+ + 
Sbjct: 223 LKLGTCFQIIDDIKNI 238


>gi|6806915|ref|NP_034412.1| geranylgeranyl pyrophosphate synthase [Mus musculus]
 gi|6831551|sp|Q9WTN0|GGPPS_MOUSE RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|4586868|dbj|BAA76512.1| GGPP synthase [Mus musculus]
 gi|47124116|gb|AAH69913.1| Geranylgeranyl diphosphate synthase 1 [Mus musculus]
 gi|74215597|dbj|BAE21415.1| unnamed protein product [Mus musculus]
          Length = 300

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   RY L L GK++RS L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|148231821|ref|NP_001091413.1| geranylgeranyl diphosphate synthase 1 [Xenopus laevis]
 gi|126631300|gb|AAI33765.1| LOC100049104 protein [Xenopus laevis]
          Length = 296

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK+IR+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYVLQLPGKQIRTKLSQAFNHWLNVPDDKIQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +       ++ +Q +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTMNHPNAVHVFTQQLLELHRGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDTYTCPSEAEYKAMVLQKTGGLFGLAVGLMQLFSSNDKDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|229819467|ref|YP_002880993.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565380|gb|ACQ79231.1| Polyprenyl synthetase [Beutenbergia cavernae DSM 12333]
          Length = 366

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 96/254 (37%), Gaps = 33/254 (12%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECA------- 62
           +   ++  LD  L + A+              A+R A  GGK++R  LV           
Sbjct: 13  DLAAVEAHLDGALAERAALTSDGGAAVGSWWRAVREACRGGKRVRPALVLAAFHGLRDDA 72

Query: 63  ----SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP--------TVH-- 108
                  + +   A++V AA E +H   L+HDD+  +D   +RRG+P          H  
Sbjct: 73  GPGHEEGDPDGGAAVQVAAAFELLHAAFLLHDDV--IDGDLVRRGRPNLIAELAEAAHTD 130

Query: 109 -------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                   ++    A++AG+ L+  A   +++     +       ++       + G + 
Sbjct: 131 GVGSSPAHEWGTAAAVLAGDVLIHAALHAVATADVPAEPRRELLELVDRCLVRTVAGEVA 190

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMC-FACESGAIMAHASQNEKERLRCFGENLGII 220
                 + E      V  +   KT A  C     +GAI+A A+   +  L   G  +G  
Sbjct: 191 DVAYAARVEVPRLPDVLRMTSWKTAAYSCEAPLVAGAILAGAAPGARAALADVGRAVGAA 250

Query: 221 FQLADDLLDCEEDL 234
           +QL DD+L    D 
Sbjct: 251 YQLRDDVLGTFGDE 264


>gi|313140540|ref|ZP_07802733.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium bifidum NCIMB 41171]
 gi|313133050|gb|EFR50667.1| probably bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium bifidum NCIMB 41171]
          Length = 365

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 96/262 (36%), Gaps = 41/262 (15%)

Query: 5   LPSKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTE 60
           + S L     RI   +D  + L     ++           R AL+   GGK++R+ L   
Sbjct: 3   VSSDLALIESRIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLALH 62

Query: 61  CASLFNVN-----------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
                +                 L +  AIE     +L+HDD+  +D+  +RRGKP  H 
Sbjct: 63  AFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDI--IDDSDLRRGKPAAHK 120

Query: 110 QYDE---------VTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
                           I+ G+ L T + +I  ++ +   + ++     L +   + +   
Sbjct: 121 ALGTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEI--- 177

Query: 160 LGGQMLDIQDEFIDETQVFM-------IQKMKTGALMCFACESGAIMAHASQNEKERLR- 211
             GQ+LD+  E     +          + + KT +    A    A++A      +     
Sbjct: 178 --GQVLDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADA 235

Query: 212 -CFGENLGIIFQLADDLLDCEE 232
              G  LG  FQLADDLLD   
Sbjct: 236 MAIGLPLGQAFQLADDLLDVIG 257


>gi|255023840|ref|ZP_05295826.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208]
          Length = 145

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 14/138 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L   LQE  + I+  +         H++    D + +       GGK +R       A 
Sbjct: 12  ALSKDLQEVLQTIEKNI----QIRDKHVEQNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64  LF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A+ + AA+E +H  +LIHDD+  +D+  +RRG PT+H +Y    A+  G+ 
Sbjct: 61  AGPDYDKDRAVSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDY 118

Query: 123 LLTYAFEIISSPKTQLKD 140
           L    F+I+S+  + +++
Sbjct: 119 LFCICFKILSAHASSVEN 136


>gi|12848440|dbj|BAB27955.1| unnamed protein product [Mus musculus]
 gi|13905030|gb|AAH06798.1| Ggps1 protein [Mus musculus]
 gi|148700811|gb|EDL32758.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Mus musculus]
          Length = 236

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   RY L L GK++RS L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|297171910|gb|ADI22897.1| geranylgeranyl pyrophosphate synthase [uncultured Rhizobium sp.
           HF0500_35F13]
          Length = 563

 Score =  109 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 81/216 (37%), Gaps = 21/216 (9%)

Query: 41  SAIRYALL--GGKKIRSFLVTECASLFNVN--------------HLTALRVGAAIECIHC 84
            A+ Y  L  GGK  R F+                           +  R   +IE  H 
Sbjct: 230 EAVAYDFLSKGGKHSRPFITLAVYDALTGGQATMAEGATFLAELPDSIRRTAMSIETFHK 289

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+H      D+   R G PT+H ++   TAI  G+ L+   +  +S+   QL     +
Sbjct: 290 ASLVH--DDIEDDDDFRYGDPTMHRRFGIPTAINVGDYLIGMGYRFVSNEAPQLGAAAAA 347

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            ++  L           G  L  +D   + +       I  +KT      A  +G  +A 
Sbjct: 348 DILDMLARAHTRLSEGQGAELMWRDALDKRLAPIDALKIYALKTAPAFEAAVLAGVRLAR 407

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
                +E +R F  NLG+ FQ+ +DL D + D   K
Sbjct: 408 TVAEIEEPVRGFARNLGVAFQILNDLGDWKGDADNK 443


>gi|229583716|ref|YP_002842217.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27]
 gi|228018765|gb|ACP54172.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.27]
          Length = 281

 Score =  109 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 23/220 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E    ID +++  L        +  +  L+    Y L  GK+ R  L          +  
Sbjct: 9   EAKTTIDKLIEQFL-------NSNRDWDLVDISTYILKDGKRFRGTLNMFFTVALGGDIK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +     AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  I
Sbjct: 62  DSYGGALAIEILHSASLALDDI--VDLDVTRRGDKAAWVIYGNRKVIFITNYLIPTALRI 119

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I +       N   + +   T    L+ M             D        ++KTG+L  
Sbjct: 120 IQTSYGDDALNTSIE-LWKDTSVGALRDM------------YDNNDYIRTIELKTGSLFK 166

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    A  +    N K+++   G+ LGII+Q+ DD +D 
Sbjct: 167 LSTVLSAYASKH-YNTKQQMLDVGKYLGIIYQVIDDFVDY 205


>gi|15899101|ref|NP_343706.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
           [Sulfolobus solfataricus P2]
 gi|284173784|ref|ZP_06387753.1| geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
           [Sulfolobus solfataricus 98/2]
 gi|13815644|gb|AAK42496.1| Geranylgeranyl pyrophosphate synthetase, putative (gdS-2)
           [Sulfolobus solfataricus P2]
 gi|261600850|gb|ACX90453.1| Polyprenyl synthetase [Sulfolobus solfataricus 98/2]
          Length = 281

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 23/220 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E    ID +++  L        +  +  L+    Y L  GK+ R  L          +  
Sbjct: 9   EAKATIDRLIEQFL-------NSNRDWDLVDISSYILKDGKRFRGTLNMFFTVALGGDIK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +     AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  I
Sbjct: 62  DSYGGALAIEILHSASLALDDI--VDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALRI 119

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I +       N   + +   T    L+ M             D +      ++KTG+L  
Sbjct: 120 IQTSYGDDALNTSIE-LWKDTSVGALRDM------------YDNSDYIRTIELKTGSLFK 166

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    A  +    N K+++   G+ LGII+Q+ DD +D 
Sbjct: 167 LSTVLSAYASKH-YNTKQQMLDVGKYLGIIYQVIDDFVDY 205


>gi|294995177|ref|ZP_06800868.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           210]
          Length = 325

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 9   DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 62  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 120 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 170 LRVVHEKTGSLIGASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227


>gi|311900885|dbj|BAJ33293.1| putative polyprenyl diphosphate synthase [Kitasatospora setae
           KM-6054]
          Length = 351

 Score =  108 bits (271), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 98/259 (37%), Gaps = 28/259 (10%)

Query: 1   MNGGLPSKLQE---NSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALL------ 48
           MN  L + L     + +R +  L    D L   A+    +   R     R   L      
Sbjct: 1   MNDVLAAALSRAAGHQRRFEPRLAAHFDALADPAAGGGPELPGRGRFPARALELLRELSL 60

Query: 49  -GGKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
            GGK++R  L+ E A+L     +  L   A ++E +H + L+HDDL  +D+  +RRG P+
Sbjct: 61  RGGKRLRVALLHEAAALVTAGPVPGLDAAALSVELLHTHGLVHDDL--IDDAPLRRGGPS 118

Query: 107 VHIQY----------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
            +  Y               ++AG+     A  ++  P     +   +   +        
Sbjct: 119 TYYAYLAEFPDRPDTARALTVLAGDLAAFLAVRVLLGPGGPPPERALAMAAVVADAGAAA 178

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMK-TGALMCFACESGAIMAHASQNEKER-LRCFG 214
            G     +        D   +  +   K TG  +      G + A A     +R LR + 
Sbjct: 179 VGGQLLDLERDFPPLPDTAFLHEVTAYKSTGYSVLAPLRLGLLAAGADPAPYDRELRGYA 238

Query: 215 ENLGIIFQLADDLLDCEED 233
           E +G+  Q+ DDLLD   D
Sbjct: 239 EAVGVANQIHDDLLDLFGD 257


>gi|321475353|gb|EFX86316.1| hypothetical protein DAPPUDRAFT_313317 [Daphnia pulex]
          Length = 347

 Score =  108 bits (271), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 85/212 (40%), Gaps = 29/212 (13%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMD 96
           + Y L GGK  R   V E   +F  +        TA+ +G A+E +  + L+ DD+  MD
Sbjct: 42  VEYNLKGGKMNRGLAVVESFMIFKNDQISEQDIETAIALGWAVEMLQAFFLVADDI--MD 99

Query: 97  NGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           +   RR KP  +   +    A      L +  ++I+ S     KD      +L L H++ 
Sbjct: 100 DSLTRRMKPCWYRTNNLGVKAFNDSILLESLIYQILLSY---CKDRHYYLPILELFHDVT 156

Query: 156 LQGMLGGQMLDIQDE----------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           ++  L GQ +D+                      I K KT     +     AI    S  
Sbjct: 157 MRTSL-GQAMDLHSTPDPNQSPDLSKFTMETYDAIVKYKTAYYSFYLPV--AIAMRVSGI 213

Query: 206 EKERLRCFGENL----GIIFQLADDLLDCEED 233
           + ERL    E++    G  FQ+ DD LDC  D
Sbjct: 214 QDERLFKQAEDILLPMGRFFQVQDDYLDCFGD 245


>gi|123491638|ref|XP_001325885.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
 gi|121908791|gb|EAY13662.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
          Length = 334

 Score =  108 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 15/207 (7%)

Query: 40  LSAIRYALLGGKKIRSFLVTECA-SLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLP 93
           +  + Y+  GGK +R  +       L   +  +        +G   E IH   LI DDL 
Sbjct: 35  IDMLEYSTKGGKMLRGIMTAAVYLELTGYSPDSEEAKVGYYLGWVEEIIHAGYLIADDL- 93

Query: 94  SMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
            MD    RRG+   + + +    A+  G  L   A+ ++   + +L     ++ ++  + 
Sbjct: 94  -MDQSETRRGQECWYKREEIGDQAVNDGLILQDLAYVLLDKIRNKLNTKYYAK-LIEFSR 151

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA---SQNEKER 209
            IG    + GQ  D   +     +   I   KT      +     ++        ++ E 
Sbjct: 152 KIGTYTTI-GQTYDFIAKIPSFQEYNQIVTYKTAFYTVVSPIVFGLIGSQIYDVDDKFED 210

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  F   LG  FQ+ DD +D   D PK
Sbjct: 211 IEKFMIRLGNYFQVQDDYIDVYGD-PK 236


>gi|291402146|ref|XP_002717392.1| PREDICTED: geranylgeranyl diphosphate synthase 1 [Oryctolagus
           cuniculus]
          Length = 300

 Score =  108 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|227826552|ref|YP_002828331.1| polyprenyl synthetase [Sulfolobus islandicus M.14.25]
 gi|227829194|ref|YP_002830973.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229577963|ref|YP_002836361.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238618638|ref|YP_002913463.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4]
 gi|284996549|ref|YP_003418316.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227455641|gb|ACP34328.1| Polyprenyl synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227458347|gb|ACP37033.1| Polyprenyl synthetase [Sulfolobus islandicus M.14.25]
 gi|228008677|gb|ACP44439.1| Polyprenyl synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238379707|gb|ACR40795.1| Polyprenyl synthetase [Sulfolobus islandicus M.16.4]
 gi|284444444|gb|ADB85946.1| Polyprenyl synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323473631|gb|ADX84237.1| polyprenyl synthetase [Sulfolobus islandicus REY15A]
 gi|323476280|gb|ADX81518.1| Polyprenyl synthetase [Sulfolobus islandicus HVE10/4]
          Length = 281

 Score =  108 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 23/220 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E    ID +++  L        +  +  L+    Y L  GK+ R  L          +  
Sbjct: 9   EAKTTIDKLIEQFL-------NSNRDWDLVDISTYILKDGKRFRGTLNMFFTVALGGDIK 61

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +     AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  I
Sbjct: 62  DSYGGALAIEILHSASLALDDI--VDLDVTRRGDKAAWVIYGNRKVIFITNYLIPTALRI 119

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I +       N   + +   T    L+ M             D        ++KTG+L  
Sbjct: 120 IQTSYGDDALNTSIE-LWKDTSVGALRDM------------YDNNDYIRTIELKTGSLFK 166

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    A  +    N K+++   G+ LGII+Q+ DD +D 
Sbjct: 167 LSTVLSAYASKH-YNTKQQMLDVGKYLGIIYQVIDDFVDY 205


>gi|256074738|ref|XP_002573680.1| geranylgeranyl pyrophosphate synthase [Schistosoma mansoni]
 gi|238658865|emb|CAZ29912.1| geranylgeranyl pyrophosphate synthase, putative [Schistosoma
           mansoni]
          Length = 338

 Score =  108 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 68/178 (38%), Gaps = 11/178 (6%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS LV        V       +   I+ +H  SLI DD+   D  ++RRGKPT H 
Sbjct: 30  GKGIRSALVAAFNYWLKVPESILRVISDVIQMLHNASLIIDDIE--DGSHLRRGKPTAHC 87

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +    +I + N     A E +S  +      I ++ ML L    G+             
Sbjct: 88  IFGVAPSINSANYAYFLALEKLSLLERPETVKIFTEQMLVLHRGQGMDIFWRSSFKCP-- 145

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               E++   +   KTG L         + +    + K  L      +G+ +Q+ DD 
Sbjct: 146 ---SESEYEAMVLCKTGGLFSLGVRLMQLFSENQTDYKPLLD----AIGLFYQIRDDY 196


>gi|212545524|ref|XP_002152916.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210065885|gb|EEA19979.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 957

 Score =  108 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 12/205 (5%)

Query: 29  SHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S   T   + LL    Y   L GK +RS L+    +   V   +   +   +  +H  SL
Sbjct: 659 SDWTTYEEEILLGPFNYLESLPGKNMRSQLIQSFNTWLKVPERSLTVIIKVVSMLHTASL 718

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+   D   +RRG+P  H  +    A+ +GN +   A   +   +     +I    +
Sbjct: 719 LIDDIQ--DQSILRRGQPVAHSIFGTAQAMNSGNYVYFLALREVQKLQNPKAISIYVGSL 776

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           + L    G++      ++        E Q   +   KTG L C A +    +  A    +
Sbjct: 777 VDLHRGQGMELFWRDSLMCP-----TEEQYLDMVANKTGGLFCLAVQ----LMQAEATVQ 827

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
                    LGIIFQ+ DD L+ + 
Sbjct: 828 ADFIPLVRLLGIIFQICDDYLNLKS 852


>gi|119476621|ref|ZP_01616931.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143]
 gi|119449877|gb|EAW31113.1| Farnesyltranstransferase [marine gamma proteobacterium HTCC2143]
          Length = 311

 Score =  108 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 11/214 (5%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGA 77
             L +L       M    +   ++A  +    GK  R+ L         ++    L   A
Sbjct: 2   DWLAELNAVYQREMPHSPSSLAVAAKYHFTHPGKSFRAQLALSSGCSLGLSTTDNLHWAA 61

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           A E +H  SLIHDD+   D    RRG+ ++H  +    A+  G+ ++  AFE+ +     
Sbjct: 62  ACELLHNASLIHDDIS--DASTHRRGQESIHQHFGADMALCLGDWMVAKAFELGARNSQH 119

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-QDEFIDETQVFMIQKMKTGALMCFACESG 196
                    +L       +Q    GQ+ DI Q +     +   I   KT  L+       
Sbjct: 120 GS-------VLVALLAQAMQATCSGQIADISQRQCAGLDEWQCIATGKTAPLLIAPIRGA 172

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           A+ A    +        G   G+ +Q  +D+ D 
Sbjct: 173 AVAAGLKADLSGLEHLVGLC-GLAYQGRNDIDDI 205


>gi|149638233|ref|XP_001512343.1| PREDICTED: similar to Geranylgeranyl diphosphate synthase 1
           [Ornithorhynchus anatinus]
          Length = 301

 Score =  108 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 16/199 (8%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           Q      LL   +Y L L GK++R+ L        NV       +    E +H  SL+ D
Sbjct: 5   QEASERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKKQVIIEVTEMLHNASLLID 64

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   DN  +RRG P  H  Y   + I + N +     E + +        + ++ +L L
Sbjct: 65  DIE--DNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLEL 122

Query: 151 THNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               GL        +  +D +    E +   +   KTG L   A     + +   ++ K 
Sbjct: 123 HQGQGL-------DIYWRDNYTCPTEEEYRAMVLQKTGGLFGLAVGLMQLFSSYKEDLKP 175

Query: 209 RLRCFGENLGIIFQLADDL 227
            L      LG+ FQ+ DD 
Sbjct: 176 LLDT----LGLFFQIRDDY 190


>gi|119331238|ref|NP_001073269.1| geranylgeranyl pyrophosphate synthase [Bos taurus]
 gi|143811398|sp|P56966|GGPPS_BOVIN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|111305299|gb|AAI20314.1| Geranylgeranyl diphosphate synthase 1 [Bos taurus]
 gi|296472248|gb|DAA14363.1| geranylgeranyl pyrophosphate synthetase [Bos taurus]
          Length = 300

 Score =  108 bits (270), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLNHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|213513990|ref|NP_001133850.1| Farnesyl pyrophosphate synthetase [Salmo salar]
 gi|209155566|gb|ACI34015.1| Farnesyl pyrophosphate synthetase [Salmo salar]
          Length = 359

 Score =  108 bits (270), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 88/250 (35%), Gaps = 23/250 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTAS-HMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           +G + S  Q    + + ++ +L  Q  +  + T   +RL   + Y   GGK+ R   V  
Sbjct: 13  SGAVQSDPQLFEAQFEELVTELTEQDLTDSVLTDALNRLREVLHYNTPGGKRNRGLSVIG 72

Query: 61  CASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
                             AL VG  IE +  + L+ DD+  MD    RRG+P  + +  E
Sbjct: 73  SLRELVPPTELTQDAVRRALLVGWCIELLQAFFLVADDI--MDASVTRRGQPCWYKR--E 128

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---- 169
              + A N        I    +   +       +L L      Q  L GQ LD+      
Sbjct: 129 RVGLDAINDSFLLEGSIYRLLRRHCRAQPYYVHLLELFTETSFQTEL-GQALDLMTAPPG 187

Query: 170 ----EFIDETQVFMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQL 223
                     +   I K KT          +   MA   S+ E    +     +G  FQ+
Sbjct: 188 QIDLNRFTMERYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEEEHNNAKHILLEMGEFFQI 247

Query: 224 ADDLLDCEED 233
            DD LDC  D
Sbjct: 248 QDDYLDCYGD 257


>gi|260814652|ref|XP_002602028.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae]
 gi|229287333|gb|EEN58040.1| hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae]
          Length = 357

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 81/241 (33%), Gaps = 25/241 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAI-------RYALLGGKKIRSFLVTECASLF- 65
           KR D +   L+ +     +   N  +  A+        Y   GGK+ R   V        
Sbjct: 19  KRFDEVFHQLVTELID--EDAKNPEISDAMVRFRQVLEYNCPGGKRNRGLSVITSYRFLV 76

Query: 66  ------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-VTAII 118
                   N   A+ VG  IE +  + L+ DD+  MD    RRG+P  +   +    AI 
Sbjct: 77  SSDQLTEENIHRAMVVGWCIEWLQAFFLVLDDI--MDQSQTRRGQPCWYRVEEVGNMAIN 134

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDE 174
               + +  + ++          +    +   T    + G    ++      +      E
Sbjct: 135 DACYIESCIYRLLRRFCRGQPYYVDLLELFQGTTYKTIVGQSLDLITSPDGKVNLSNFTE 194

Query: 175 TQVFMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   I K KT          +   MA   S+   E  +     +G  FQ+ DD LDC  
Sbjct: 195 ERYNAIVKYKTAFYSFHLPVAAAMYMAGITSKESHENAKTILLEMGRFFQIQDDYLDCYG 254

Query: 233 D 233
           D
Sbjct: 255 D 255


>gi|145596949|ref|YP_001161246.1| polyprenyl synthetase [Salinispora tropica CNB-440]
 gi|145306286|gb|ABP56868.1| Polyprenyl synthetase [Salinispora tropica CNB-440]
          Length = 384

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 86/258 (33%), Gaps = 27/258 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
           +   L +  +E    +D  L D L       + + +       +A    L GGK++R   
Sbjct: 25  VGARLAAYTEEVVAAVDDTLVDFLATEIDALAAIDSSAGGFATTARDSVLAGGKRLRPTF 84

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSL---IHDDLPSMDNGYIRRGKPTVHI----- 109
                            V  A+  +         HDD+  MD+   RRG+PT H+     
Sbjct: 85  AYWGWRGVVGGAEPLPPVLPALAALELLHAFALTHDDV--MDSSATRRGRPTAHVAVAAQ 142

Query: 110 -----------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                      ++ E  A++ G+  L +A  +++         +  +          + G
Sbjct: 143 HAAAGRRGDSGKFGENVAVLVGDLCLVWADRLLAQAVLPPARLLEVRHCYDQMRVETVAG 202

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAH--ASQNEKERLRCFGE 215
                + +         +   + + KT    + +    GA +A   A          +G+
Sbjct: 203 QYLDVLGESDPTNWSVERALQVARYKTASYTVRWPLLFGARLAGVVADSPLIAAYDRYGQ 262

Query: 216 NLGIIFQLADDLLDCEED 233
            +G  FQL DDLL    D
Sbjct: 263 AIGEAFQLCDDLLGVYGD 280


>gi|307111455|gb|EFN59689.1| hypothetical protein CHLNCDRAFT_33543 [Chlorella variabilis]
          Length = 346

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 86/252 (34%), Gaps = 33/252 (13%)

Query: 6   PSKLQENSKRIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT----E 60
            S LQE  K  + + D+++  +  +         +   + Y +  GK  R   V      
Sbjct: 3   SSLLQEFLKVFEQLRDEIVNDELLAGQPEASKQWVKEMMDYNVPLGKLNRGMAVLDVVQS 62

Query: 61  CASLFNV-----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            A          +   A  +G  IE +  Y L+ DD+  MD+   RRG+P  + + +   
Sbjct: 63  LAEAKGAAPSAEDEFRANALGWCIEFLQAYFLVADDI--MDSSITRRGQPCWYRRPEVGM 120

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI-- 172
            AI  G  L    F I+      L   +    +L L H +       GQ+LD     I  
Sbjct: 121 VAINDGIILEACIFRILKKHFGALPCYV---HLLELFHEV-TFKTAHGQLLDTTTAPIGT 176

Query: 173 ------DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENL----GIIF 221
                        I   KT           G  +A  +           E++    G  F
Sbjct: 177 VDLSRYTLDTYLRIVTYKTAFYTFYLPVACGLRLAGITDP---AAYKLAEDICLQMGRYF 233

Query: 222 QLADDLLDCEED 233
           Q+ DD LDC  D
Sbjct: 234 QIQDDYLDCFGD 245


>gi|320168042|gb|EFW44941.1| geranylgeranyl pyrophosphate synthetase [Capsaspora owczarzaki ATCC
           30864]
          Length = 314

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 75/202 (37%), Gaps = 16/202 (7%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           Q    LL    Y   + GK++R+ L+       ++       +   ++ +H  SL+ DD+
Sbjct: 5   QQQKTLLEPYTYLTSVPGKEVRTILIRAFDQWMHIPTKELDEIKGIVQMLHSASLLIDDI 64

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H+ Y   + I   N     A E +            ++ +L L  
Sbjct: 65  E--DNSKLRRGVPVAHLIYGVPSTINCANYAYFLALERVLKLNKPEAVAAFTEELLELHR 122

Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             GL        +  +D  +   E +   + K KTG L   +       +    N    L
Sbjct: 123 GQGL-------DIWWRDSNVCPTEEEYREMVKRKTGGLFRLSVRLMQAFSENRSNFVPLL 175

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
                 LG+ FQ+ DD  + E 
Sbjct: 176 D----ALGLYFQIRDDFANLES 193


>gi|320531404|ref|ZP_08032371.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320136376|gb|EFW28357.1| polyprenyl synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 386

 Score =  107 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 96/276 (34%), Gaps = 48/276 (17%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTE 60
             LP+ L      ++  L ++L       +   Q    LL A    L GGK++R+ L   
Sbjct: 2   SALPAALGRIRPAVEHRLTEVLEDCRRRWEDLGQAAPELLGAASSVLSGGKRMRAVLGAI 61

Query: 61  CASLFNVNHL--------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI--- 109
             ++ +             A+ +GAA+E     +L+HDDL  MD    RRG P  H    
Sbjct: 62  GCAILSAPEQRAECLTGSDAVHLGAALELYQASALVHDDL--MDGADTRRGMPAAHRAFT 119

Query: 110 -------------QYDEVTAIIAGNGLLTYAFE---IISSPKTQLKDNIRSQLMLSLTHN 153
                         +    AI+ G+ LL+ A E    +S  +   +   R+        +
Sbjct: 120 RDHEARGWLGRPQTFGANGAILLGDLLLSLAGEEMSALSQSRVSCETGSRTVQYARTAFD 179

Query: 154 IGLQGMLGGQMLDIQDEFIDE--------------TQVFMIQKMKTGALMC---FACESG 196
                +  GQ LD++ E +                     + + K             + 
Sbjct: 180 AMTTEVALGQFLDVRSENLPLPWDREPGAAARRMHDDALSVVRHKAARYSVRHPLLIGAL 239

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 S    E L  FGE++GI FQL DD L    
Sbjct: 240 LAGLDPSGPTAEHLAAFGEDVGIAFQLRDDELGVFG 275


>gi|93278760|pdb|2AZK|A Chain A, Crystal Structure For The Mutant W136e Of Sulfolobus
           Solfataricus Hexaprenyl Pyrophosphate Synthase
 gi|93278761|pdb|2AZK|B Chain B, Crystal Structure For The Mutant W136e Of Sulfolobus
           Solfataricus Hexaprenyl Pyrophosphate Synthase
          Length = 289

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 23/220 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E    ID +++  L        +  +  L+    Y L  GK+ R  L          +  
Sbjct: 17  EAKATIDRLIEQFL-------NSNRDWDLVDISSYILKDGKRFRGTLNMFFTVALGGDIK 69

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +     AIE +H  SL  DD+  +D    RRG     + Y     I   N L+  A  I
Sbjct: 70  DSYGGALAIEILHSASLALDDI--VDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALRI 127

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I +      D + + + L    ++G              +  D +      ++KTG+L  
Sbjct: 128 IQTSYGD--DALNTSIELEKDTSVGALR-----------DMYDNSDYIRTIELKTGSLFK 174

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    A  +    N K+++   G+ LGII+Q+ DD +D 
Sbjct: 175 LSTVLSAYASKH-YNTKQQMLDVGKYLGIIYQVIDDFVDY 213


>gi|15840414|ref|NP_335451.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|13880584|gb|AAK45265.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 333

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 17  DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 69

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 70  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 127

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 128 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHC 177

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 178 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 235


>gi|219127608|ref|XP_002184024.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404747|gb|EEC44693.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 343

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 83/223 (37%), Gaps = 22/223 (9%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTALRVGAAIECIH 83
           +  +  D L   + Y + GGK  R   V +   +              A  +G AIE + 
Sbjct: 22  VAPEAIDYLRRMMDYNVPGGKLNRGTTVIDVYRVLLGKATLTPTETARAAVLGWAIEFLQ 81

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNI 142
            + L+ DD+  MD+   RRG+P  +   D    AI     L ++ F I+          +
Sbjct: 82  AFFLVADDV--MDDSQTRRGQPCWYKLPDVQLVAINDSFLLESFVFAILRRHFGHEPFYL 139

Query: 143 -RSQLMLSLTHNIGLQGML--GGQMLDIQDE-------FIDETQVFMIQKMKTG-ALMCF 191
              +LML +TH   L  +L    Q     D+           T+   I K KT       
Sbjct: 140 HLLELMLDVTHKTELGQLLDLTSQPPQHHDQPHHVDLDRFTLTRYQQIVKYKTAFYSFYL 199

Query: 192 ACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEED 233
               G I++  +      + R     +G  FQ+ DD LDC  D
Sbjct: 200 PVAMGMILSGVTDAPALAQARTICCLMGEYFQIQDDYLDCFGD 242


>gi|323720556|gb|EGB29637.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 325

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 9   DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 62  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
           +     A ++ S          R               ++ GQM   +            
Sbjct: 120 DYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHC 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 170 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227


>gi|3915686|sp|P08836|FPPS_CHICK RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
          Length = 367

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 84/235 (35%), Gaps = 25/235 (10%)

Query: 18  TILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
            I+ DL      H +      RL   ++Y   GGK  R   V       +          
Sbjct: 37  QIVRDLTEDGIGHPEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESL 96

Query: 72  --ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAF 128
             AL VG  IE    + L+ DD+  MD    RRG+   + +      AI     L +  +
Sbjct: 97  RCALAVGWCIELFQAFFLVADDI--MDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVY 154

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--------FIDETQVFMI 180
            ++   K   +       +L L      Q  L GQMLD+              E +   I
Sbjct: 155 RVL---KKYCRQRPYYVHLLELFLQTAYQTEL-GQMLDLITAPVSKVDLSHFSEERYKAI 210

Query: 181 QKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            K KT     +   + A+  +   S+ E E  +     +G  FQ+ DD LDC  D
Sbjct: 211 VKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGD 265


>gi|224283386|ref|ZP_03646708.1| bifunctional short chain isoprenyl diphosphate synthase
           [Bifidobacterium bifidum NCIMB 41171]
          Length = 359

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 93/252 (36%), Gaps = 41/252 (16%)

Query: 15  RIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALL---GGKKIRSFLVTECASLFNVN-- 68
           RI   +D  + L     ++           R AL+   GGK++R+ L        +    
Sbjct: 7   RIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLALHAFDATDPQGH 66

Query: 69  ---------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE------ 113
                        L +  AIE     +L+HDD+  +D+  +RRGKP  H           
Sbjct: 67  DDDDAHARRRDAVLDLACAIEVFQTAALVHDDI--IDDSDLRRGKPAAHKALGTTSHSAS 124

Query: 114 ---VTAIIAGNGLLTYAFEII-SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 I+ G+ L T + +I  ++ +   + ++     L +   + +     GQ+LD+  
Sbjct: 125 LGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEI-----GQVLDLAV 179

Query: 170 EFIDETQVFM-------IQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGENLGII 220
           E     +          + + KT +    A    A++A      +        G  LG  
Sbjct: 180 ELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGLPLGQA 239

Query: 221 FQLADDLLDCEE 232
           FQLADDLLD   
Sbjct: 240 FQLADDLLDVIG 251


>gi|72161455|ref|YP_289112.1| polyprenyl synthase / dimethylallyltranstransferase [Thermobifida
           fusca YX]
 gi|71915187|gb|AAZ55089.1| putative polyprenyl synthase / dimethylallyltranstransferase
           [Thermobifida fusca YX]
          Length = 356

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 87/253 (34%), Gaps = 23/253 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV 58
           M+    S +      +D  L   +      +     +   +L+A+   + GGK++R    
Sbjct: 1   MSSSHLSPVAFVRPLVDAELAAFVASRRPLLLEIGAEWEPVLAALEAMISGGKRLRPAFC 60

Query: 59  TECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------- 110
                              AA+E +   +LIHDD+  +DN   RRG+P VH +       
Sbjct: 61  YWGWRGAGGGEEPGLYTAAAALELLQACALIHDDV--IDNSDTRRGQPAVHRRLAALHRE 118

Query: 111 ---------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                    +    AI+ G+  L +  ++  S     +     +    L     + G   
Sbjct: 119 SGWHGDPDEFGRGAAILLGDLCLAWCEDMYQSSALPAEALAAGRGPFDLMRTEVVAGQYL 178

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             +   +     E  +  + + K+    +      GA +A            +G  LGI 
Sbjct: 179 DLVEQARGADTVEAAL-RVMRFKSAKYTIEQPLHLGAALAGRYAELAPAYTAYGIPLGIA 237

Query: 221 FQLADDLLDCEED 233
           FQL DD+L    D
Sbjct: 238 FQLRDDVLGVFGD 250


>gi|47229030|emb|CAG09545.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 299

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 16/203 (7%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
            S  Q      LL   +Y L L GK++R+ L        NV       +    E +H  S
Sbjct: 2   DSSSQASSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIRVTEMLHNAS 61

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+   D+  +RRG P  H  Y   + I + N +     E + +        + ++ 
Sbjct: 62  LLIDDIE--DSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVRVFTRQ 119

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +L L    GL        +  +D +    E +   +   KTG L   A     + +   Q
Sbjct: 120 LLELHRGQGL-------DIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQ 172

Query: 205 NEKERLRCFGENLGIIFQLADDL 227
           + K  L      LG+ FQ+ DD 
Sbjct: 173 DLKPLLDT----LGLFFQIRDDY 191


>gi|45709211|gb|AAH67768.1| GGPS1 protein [Homo sapiens]
          Length = 300

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +   Q    + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHQDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|332236282|ref|XP_003267333.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
           [Nomascus leucogenys]
 gi|332236284|ref|XP_003267334.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
           [Nomascus leucogenys]
 gi|332236286|ref|XP_003267335.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
           [Nomascus leucogenys]
 gi|332236288|ref|XP_003267336.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
           [Nomascus leucogenys]
          Length = 300

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|297281802|ref|XP_002802154.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
           [Macaca mulatta]
 gi|297281804|ref|XP_002802155.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
           [Macaca mulatta]
 gi|297281806|ref|XP_002802156.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
           [Macaca mulatta]
 gi|297281808|ref|XP_002802157.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
           [Macaca mulatta]
          Length = 300

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|194042553|ref|XP_001924804.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Sus scrofa]
          Length = 300

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|150261574|pdb|2Q80|A Chain A, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261575|pdb|2Q80|B Chain B, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261576|pdb|2Q80|C Chain C, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261577|pdb|2Q80|D Chain D, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261578|pdb|2Q80|E Chain E, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
 gi|150261579|pdb|2Q80|F Chain F, Crystal Structure Of Human Geranylgeranyl Pyrophosphate
           Synthase Bound To Ggpp
          Length = 301

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 13  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 70

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 71  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 129

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 130 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 180

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 181 -LGLFFQIRDDY 191


>gi|4758430|ref|NP_004828.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
 gi|83700220|ref|NP_001032354.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
 gi|332812275|ref|XP_003308874.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
           [Pan troglodytes]
 gi|332812277|ref|XP_003308875.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
           [Pan troglodytes]
 gi|332812279|ref|XP_003339061.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pan
           troglodytes]
 gi|332812283|ref|XP_003308876.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 3
           [Pan troglodytes]
 gi|6831549|sp|O95749|GGPPS_HUMAN RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|5410359|gb|AAD43050.1|AF125394_1 gerannylgeranyl pyrophosphate synthase [Homo sapiens]
 gi|12024672|gb|AAG45581.1|AF057698_1 geranylgeranyl pyrophosphate synthetase [Homo sapiens]
 gi|4520350|dbj|BAA75909.1| geranylgeranyl diphosphate synthase [Homo sapiens]
 gi|4586866|dbj|BAA76511.1| GGPP synthase [Homo sapiens]
 gi|4730813|dbj|BAA77251.1| geranylgeranyl pyrophosphate synthase [Homo sapiens]
 gi|13528915|gb|AAH05252.1| Geranylgeranyl diphosphate synthase 1 [Homo sapiens]
 gi|55960163|emb|CAI13753.1| geranylgeranyl diphosphate synthase 1 [Homo sapiens]
 gi|119590422|gb|EAW70016.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
 gi|119590423|gb|EAW70017.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
 gi|119590425|gb|EAW70019.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Homo sapiens]
 gi|261861372|dbj|BAI47208.1| geranylgeranyl diphosphate synthase 1 [synthetic construct]
 gi|312152218|gb|ADQ32621.1| geranylgeranyl diphosphate synthase 1 [synthetic construct]
          Length = 300

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|310942864|pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942868|pdb|3OAC|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
 gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
           Pyrophosphate Synthase In Complex With Ligands
          Length = 264

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 84/218 (38%), Gaps = 28/218 (12%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-----LVTECAS 63
           +Q     I+  ++  L      +  +  + +   + +                L      
Sbjct: 1   MQPYWAAIEADIERYL---KKSITIRPPETVFGPMHHLTFAA----PATAASTLCLAACE 53

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L   +   A+   AAI  +H  + +H+ LP           P +  +Y     ++ G+G+
Sbjct: 54  LVGGDRSQAMAAAAAIHLVHAAAYVHEHLP-----------PAIQHKYGPNVELLTGDGI 102

Query: 124 LTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQVF 178
           + + FE+++    P      +   ++++ ++   G +GM+ G  +  +I D       + 
Sbjct: 103 VPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIE 162

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
            + K K G +       GAI+  A++ E ++LR FG  
Sbjct: 163 YVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLY 200


>gi|326915522|ref|XP_003204065.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Meleagris
           gallopavo]
          Length = 299

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 16/197 (8%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + + R+L   +Y L L GK++R+ L        NV       +    E +H  SL+ DD+
Sbjct: 6   ETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDI 65

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   + I   N +     E + +        + ++ +L L  
Sbjct: 66  E--DNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHK 123

Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             GL        +  +D +    E +   +   KTG L   A     + ++  ++ K  L
Sbjct: 124 GQGL-------DIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLL 176

Query: 211 RCFGENLGIIFQLADDL 227
                 LG+ FQ+ DD 
Sbjct: 177 NT----LGLFFQIRDDY 189


>gi|149690652|ref|XP_001492882.1| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Equus
           caballus]
          Length = 299

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL    Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYEYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + + +      + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|157831115|pdb|1FPS|A Chain A, Crystal Structure Of Recombinant Farnesyl Diphosphate
           Synthase At 2.6 Angstroms Resolution
          Length = 348

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 81/234 (34%), Gaps = 23/234 (9%)

Query: 18  TILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT----- 71
            I+ DL      H +      RL   ++Y   GGK  R   V       +          
Sbjct: 18  QIVRDLTEDGIGHPEVGDAVARLKEVLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESL 77

Query: 72  --ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAF 128
             AL VG  IE    + L+ DD+  MD    RRG+   + +      AI     L +  +
Sbjct: 78  RCALAVGWCIELFQAFFLVADDI--MDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVY 135

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------FIDETQVFMIQ 181
            ++   K   +       +L L      Q  LG  +  I             E +   I 
Sbjct: 136 RVL---KKYCRQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIV 192

Query: 182 KMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K KT     +   + A+  +   S+ E E  +     +G  FQ+ DD LDC  D
Sbjct: 193 KYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGD 246


>gi|326435055|gb|EGD80625.1| quemao protein [Salpingoeca sp. ATCC 50818]
          Length = 328

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 16/201 (7%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            + ++  + L     Y   + GK IRS L+        V      ++ +  + +H  SL+
Sbjct: 19  QVSSREEEILQEPYNYITQIPGKDIRSQLIQAFNLWLKVPDDKLSKIKSVTKILHNASLL 78

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
            DD+   DN  +RRG P  H  Y     I   N +   A   I++        + +  +L
Sbjct: 79  IDDIE--DNSKLRRGIPVAHSVYGVAQTINCANYMYFKAMAEIAALGHPDAAQVFTDQLL 136

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
            L    G+        +  +D F+   E +   +   KTG L   A +   + +  S++ 
Sbjct: 137 ELHRGQGM-------DIYWRDAFVCPTEDEYRTMVLRKTGGLFQLAVQIMQLFSDDSRDY 189

Query: 207 KERLRCFGENLGIIFQLADDL 227
              L  F    G+ FQ+ DD 
Sbjct: 190 TPLLNAF----GLYFQIRDDY 206


>gi|260205469|ref|ZP_05772960.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis K85]
 gi|289574857|ref|ZP_06455084.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis K85]
 gi|289539288|gb|EFD43866.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis K85]
          Length = 352

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 25/230 (10%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIH 83
           + A+HM + ++  +     + L GGK++R                    L + +A+E +H
Sbjct: 18  RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSALELLH 77

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAGNGLLTYA 127
            ++L+HDDL  +D    RRG+PT  ++Y                    AI+ G+    +A
Sbjct: 78  AWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWA 135

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMK 184
            +I+S           +Q  +          +LGGQ LDI  E            +  +K
Sbjct: 136 DDIVSKVCQSALAP-DAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLK 194

Query: 185 TG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T    +    + G   A    +       FG +LG+ FQL DD+L    D
Sbjct: 195 TACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGD 244


>gi|254572275|ref|XP_002493247.1| Geranylgeranyl diphosphate synthase, increases the intracellular
           pool of geranylgeranyl diphosphate [Pichia pastoris
           GS115]
 gi|238033045|emb|CAY71068.1| Geranylgeranyl diphosphate synthase, increases the intracellular
           pool of geranylgeranyl diphosphate [Pichia pastoris
           GS115]
 gi|328352737|emb|CCA39135.1| hypothetical protein PP7435_Chr3-0163 [Pichia pastoris CBS 7435]
          Length = 336

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 16/213 (7%)

Query: 28  ASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
                 +    +    +Y   + GK  R  L+        V+H +   +   I+ +H  S
Sbjct: 8   DPKWSDEMEKLITEPYKYIKKVPGKHFRRILIDLFNEFLEVDHQSVESIEQVIDILHNSS 67

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-DNIRSQ 145
           L+ DD+   D+  +RRG P  H  +     I   N +   A +   +     + +++  +
Sbjct: 68  LMVDDVE--DSATLRRGIPATHNVFGIPQTINTANYMYFVAIQKAGTLGNHARVNDVLIE 125

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            M++L    GL        L  +D F+   E Q   +   KTG L         ++ + +
Sbjct: 126 EMMNLHRGQGL-------DLYWRDNFVCPSEEQYLDMVMNKTGGLFRLTVRLMELVQNPN 178

Query: 204 QNEKER---LRCFGENLGIIFQLADDLLDCEED 233
              + +   L  F   LGI++Q+ DD L+ + D
Sbjct: 179 DGVERKASSLVHFANLLGIVYQIRDDYLNLKSD 211


>gi|260185898|ref|ZP_05763372.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289446570|ref|ZP_06436314.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289419528|gb|EFD16729.1| polyprenyl-diphosphate synthase grcC2 [Mycobacterium tuberculosis
           CPHL_A]
          Length = 325

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 90/238 (37%), Gaps = 23/238 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    + + +   RI  +++  L Q    M+      L+ A      GG   R       
Sbjct: 9   DPQFTANVHDGIARITELINSELSQADEVMRDTVA-HLVDA------GGTPFRPLFTVLA 61

Query: 62  ASLF-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           A L  + +       GAAIE +H  +L HD +  +D   + R  P+ + ++    AI+AG
Sbjct: 62  AQLGSDPDGWEVTVAGAAIELMHLGTLCHDRV--VDESDMSRKTPSDNTRWTNNFAILAG 119

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDETQV 177
                 A ++ S          R               ++ GQM   +            
Sbjct: 120 GYRFATASQLAS----------RLDPEAFAVVAEAFAELITGQMRATRGPASHIDTIEHY 169

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             +   KTG+L+  + + GA ++ A++ +  R+   G  +G  F+++ D++    D  
Sbjct: 170 LRVVHEKTGSLIAASGQLGAALSGAAEEQIRRVARLGRMIGAAFEISRDIIAISGDSA 227


>gi|14625000|dbj|BAB61880.1| farnesyl diphosphate synthase [Rhodobacter azotoformans]
          Length = 137

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 8/130 (6%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH ++DE TA++AG+ L T AFE+++ P       +R +L+ +L    G +GM
Sbjct: 12  LRRGLPTVHRKWDECTAVLAGDALQTLAFELLADPALG-PAEVRIRLVETLARASGAEGM 70

Query: 160 LGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ LDI  E     +   Q+  +Q  KTGAL+ ++ E+GAI+  A       LR +  
Sbjct: 71  VLGQALDIAAETAAVPLTLEQITHLQAGKTGALIRWSAEAGAILGQADTG---PLRRYAT 127

Query: 216 NLGIIFQLAD 225
            LG+ FQ+AD
Sbjct: 128 ALGLAFQVAD 137


>gi|149032543|gb|EDL87421.1| geranylgeranyl diphosphate synthase 1, isoform CRA_a [Rattus
           norvegicus]
          Length = 267

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|56090562|ref|NP_001007627.1| geranylgeranyl pyrophosphate synthase [Rattus norvegicus]
 gi|81891588|sp|Q6F596|GGPPS_RAT RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|50428383|dbj|BAD30051.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
 gi|50428385|dbj|BAD30052.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
 gi|50428387|dbj|BAD30053.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
 gi|50428389|dbj|BAD30054.1| geranylgeranyl diphosphate synthase1 [Rattus norvegicus]
 gi|59861856|gb|AAH90327.1| Geranylgeranyl diphosphate synthase 1 [Rattus norvegicus]
          Length = 300

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|15609310|ref|NP_216689.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
           H37Rv]
 gi|15841663|ref|NP_336700.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31793351|ref|NP_855844.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium bovis
           AF2122/97]
 gi|121638053|ref|YP_978277.1| putative geranylgeranyl pyrophosphate synthetase idsA2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148661989|ref|YP_001283512.1| putative geranylgeranyl pyrophosphate synthetase IdsA2
           [Mycobacterium tuberculosis H37Ra]
 gi|148823380|ref|YP_001288134.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis F11]
 gi|167967239|ref|ZP_02549516.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis H37Ra]
 gi|215403561|ref|ZP_03415742.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 02_1987]
 gi|215411897|ref|ZP_03420671.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215427549|ref|ZP_03425468.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T92]
 gi|215431104|ref|ZP_03429023.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis EAS054]
 gi|215446402|ref|ZP_03433154.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T85]
 gi|218753894|ref|ZP_03532690.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis GM 1503]
 gi|219558151|ref|ZP_03537227.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T17]
 gi|224990547|ref|YP_002645234.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253798764|ref|YP_003031765.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|254232327|ref|ZP_04925654.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis C]
 gi|254364972|ref|ZP_04981018.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260187169|ref|ZP_05764643.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|260201290|ref|ZP_05768781.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T46]
 gi|289443678|ref|ZP_06433422.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T46]
 gi|289447799|ref|ZP_06437543.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289554042|ref|ZP_06443252.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 605]
 gi|289570287|ref|ZP_06450514.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T17]
 gi|289745445|ref|ZP_06504823.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
           02_1987]
 gi|289750767|ref|ZP_06510145.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T92]
 gi|289754281|ref|ZP_06513659.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054]
 gi|289758293|ref|ZP_06517671.1| polyprenyl synthetase [Mycobacterium tuberculosis T85]
 gi|289762332|ref|ZP_06521710.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis GM 1503]
 gi|294993558|ref|ZP_06799249.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 210]
 gi|297634761|ref|ZP_06952541.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 4207]
 gi|297731752|ref|ZP_06960870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN R506]
 gi|298525665|ref|ZP_07013074.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306776423|ref|ZP_07414760.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu001]
 gi|306780200|ref|ZP_07418537.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu002]
 gi|306784947|ref|ZP_07423269.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu003]
 gi|306789314|ref|ZP_07427636.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu004]
 gi|306793640|ref|ZP_07431942.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu005]
 gi|306798031|ref|ZP_07436333.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu006]
 gi|306803911|ref|ZP_07440579.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu008]
 gi|306808482|ref|ZP_07445150.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu007]
 gi|306968308|ref|ZP_07480969.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu009]
 gi|306972535|ref|ZP_07485196.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu010]
 gi|307080242|ref|ZP_07489412.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu011]
 gi|307084831|ref|ZP_07493944.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu012]
 gi|313659086|ref|ZP_07815966.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN V2475]
 gi|2911093|emb|CAA17477.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE)
           (GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|13881916|gb|AAK46514.1| polyprenyl synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31618943|emb|CAD97048.1| PROBABLE GERANYLGERANYL PYROPHOSPHATE SYNTHETASE IDSA2 (GGPPSASE)
           (GGPP SYNTHETASE) (GERANYLGERANYL DIPHOSPHATE SYNTHASE)
           [Mycobacterium bovis AF2122/97]
 gi|121493701|emb|CAL72176.1| Probable geranylgeranyl pyrophosphate synthetase idsA2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124601386|gb|EAY60396.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis C]
 gi|134150486|gb|EBA42531.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148506141|gb|ABQ73950.1| putative geranylgeranyl pyrophosphate synthetase IdsA2
           [Mycobacterium tuberculosis H37Ra]
 gi|148721907|gb|ABR06532.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis F11]
 gi|224773660|dbj|BAH26466.1| putative geranylgeranyl pyrophosphate synthetase [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253320267|gb|ACT24870.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|289416597|gb|EFD13837.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T46]
 gi|289420757|gb|EFD17958.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289438674|gb|EFD21167.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 605]
 gi|289544041|gb|EFD47689.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T17]
 gi|289685973|gb|EFD53461.1| geranylgeranyl pyrophosphate synthetase [Mycobacterium tuberculosis
           02_1987]
 gi|289691354|gb|EFD58783.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis T92]
 gi|289694868|gb|EFD62297.1| polyprenyl synthetase [Mycobacterium tuberculosis EAS054]
 gi|289709838|gb|EFD73854.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis GM 1503]
 gi|289713857|gb|EFD77869.1| polyprenyl synthetase [Mycobacterium tuberculosis T85]
 gi|298495459|gb|EFI30753.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308215160|gb|EFO74559.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu001]
 gi|308326915|gb|EFP15766.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu002]
 gi|308330351|gb|EFP19202.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu003]
 gi|308334184|gb|EFP23035.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu004]
 gi|308337984|gb|EFP26835.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu005]
 gi|308341669|gb|EFP30520.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu006]
 gi|308345161|gb|EFP34012.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu007]
 gi|308349463|gb|EFP38314.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu008]
 gi|308354094|gb|EFP42945.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu009]
 gi|308358037|gb|EFP46888.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu010]
 gi|308361973|gb|EFP50824.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu011]
 gi|308365602|gb|EFP54453.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis SUMu012]
 gi|323719268|gb|EGB28412.1| geranylgeranyl pyrophosphate synthetase id [Mycobacterium
           tuberculosis CDC1551A]
 gi|326903788|gb|EGE50721.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis W-148]
 gi|328458527|gb|AEB03950.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis KZN 4207]
          Length = 352

 Score =  106 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 25/230 (10%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--NVNHLTALRVGAAIECIH 83
           + A+HM + ++  +     + L GGK++R                    L + +A+E +H
Sbjct: 18  RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHAVASREPDPDVLLLFSALELLH 77

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAGNGLLTYA 127
            ++L+HDDL  +D    RRG+PT  ++Y                    AI+ G+    +A
Sbjct: 78  AWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWA 135

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMK 184
            +I+S           +Q  +          +LGGQ LDI  E            +  +K
Sbjct: 136 DDIVSKVCQSALAP-DAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLK 194

Query: 185 TG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T    +    + G   A    +       FG +LG+ FQL DD+L    D
Sbjct: 195 TACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGD 244


>gi|330974647|gb|EGH74713.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 131

 Score =  106 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           +  +    +++ G+ L + +FE++    +
Sbjct: 100 NALWGNAPSVLVGDFLYSRSFEMMVELGS 128


>gi|291457724|ref|ZP_06597114.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve
           DSM 20213]
 gi|291380777|gb|EFE88295.1| short chain isoprenyl diphosphate synthase [Bifidobacterium breve
           DSM 20213]
          Length = 363

 Score =  106 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 24/206 (11%)

Query: 49  GGKKIRSFLVTECASLFNVN--------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           GGK++R+ L  +                      +  AIE     +L+HDD+  +D   +
Sbjct: 52  GGKRLRALLTLDAFDALMAQTGSSTPDMRDAMTDLACAIEVFQTAALVHDDI--IDESDL 109

Query: 101 RRGKPTVHIQYDEVTAIIA-GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           RRGKP+ H   ++     A G+GL     +I+++   ++      +L  +   N     M
Sbjct: 110 RRGKPSAHRALEQAVHSGAIGHGLGLMLGDILATACIEIARRAARRLDNTDAINEAFLTM 169

Query: 160 LG----GQMLDIQDEFIDETQ-------VFMIQKMKTGA--LMCFACESGAIMAHASQNE 206
                 GQ+LD+  E                + + KT +   +     +           
Sbjct: 170 QREVEIGQVLDLAVELTPLEDPDALVDASLNVFRWKTASYTTIAPLLFALLAAGADPAEA 229

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
            ++    G  LG+ FQLADDLLD   
Sbjct: 230 WQQALAVGRPLGLAFQLADDLLDVVG 255


>gi|302688755|ref|XP_003034057.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8]
 gi|300107752|gb|EFI99154.1| hypothetical protein SCHCODRAFT_15088 [Schizophyllum commune H4-8]
          Length = 320

 Score =  106 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 16/223 (7%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTAL 73
           R D IL  L   + S    ++   +L    Y L   GK+ R+ L+        V   T  
Sbjct: 3   RYDNILARL--SSESRWTPENEKAVLEPYEYLLSTPGKEFRTQLIDAFNKWLAVPGDTLQ 60

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +   +  +H  SL+ DD+   D+  +RRGKP  H  Y     I  GN +   A+  +  
Sbjct: 61  IIAKIVNMLHSASLMVDDIE--DDSQLRRGKPVTHKIYGVPQTINTGNYVYFLAYRELLL 118

Query: 134 PKTQLK----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            +   K    + + +  +LSL    GL+ +    +         E +   +   KTG L+
Sbjct: 119 LREPAKGIDVEKLVTDELLSLHRGQGLELLWRDSLQCP-----TEDEYIDMVNNKTGGLL 173

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   +MA ++QN           +G+ FQ+ DDL++ + 
Sbjct: 174 RIGIRL--MMACSTQNRDMNYIPLVNLIGVFFQIRDDLMNLQS 214


>gi|301792142|ref|XP_002931038.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Ailuropoda
           melanoleuca]
          Length = 300

 Score =  106 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 74/192 (38%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + +  +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|71027225|ref|XP_763256.1| prenyl transferase [Theileria parva strain Muguga]
 gi|68350209|gb|EAN30973.1| prenyl transferase, putative [Theileria parva]
          Length = 453

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 11/152 (7%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E IH  SLIHDD+  +D   +RR   + H ++    +++ G+ LL+ + +II+S +    
Sbjct: 171 ELIHIGSLIHDDI--IDESDVRRNLMSSHKKFGVKFSVLFGDFLLSKSAQIITSLQ---- 224

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
            NI+    LS T +  + G L    L+  D ++          +KT +L+     S + +
Sbjct: 225 -NIKLVDKLSNTLDNLIHGELMYVNLNNNDLYLS---YLYKIYLKTASLISNNISSVSHL 280

Query: 200 AHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230
            +    +  E L   G ++G+ FQ+ DDLLD 
Sbjct: 281 TNQYNFQLDELLYIIGVHIGLSFQMCDDLLDY 312


>gi|2957271|gb|AAC05595.1| geranylgeranyl pyrophosphate synthase [Drosophila melanogaster]
          Length = 335

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 19/204 (9%)

Query: 27  TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                Q + ++ LL    Y   + GK+ RS L         +      ++G  ++ +H  
Sbjct: 12  KDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGNIVQMLHNS 71

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ +     DN  +RRG P  H  Y   + I A N  L  A E +          + ++
Sbjct: 72  SLLIE-----DNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEVRKVYTE 126

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +L L    G++       +  +D F    E+   ++   KTG L   A     + + ++
Sbjct: 127 QLLELHRGQGME-------IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS-SN 178

Query: 204 QNEKERLRCFGENLGIIFQLADDL 227
           + +  +L      LG+ FQ+ DD 
Sbjct: 179 KEDYSKLTAI---LGLYFQIRDDY 199


>gi|242017538|ref|XP_002429245.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus
           corporis]
 gi|212514134|gb|EEB16507.1| geranylgeranyl pyrophosphate synthase, putative [Pediculus humanus
           corporis]
          Length = 313

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 16/197 (8%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
             +++LL   +Y L + GK +R  L         +       +   ++ +H  SL+ DD+
Sbjct: 19  DQDEKLLQPFKYILQVPGKHMREKLAKAFNYWLKIPSDKLNVIVEIVQILHNSSLLLDDI 78

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   + I A N ++  A E   S        + ++ +L L  
Sbjct: 79  Q--DNSVLRRGIPVAHSIYGIPSTINAANYVIFIALEKTLSLDHPNATQVYTEQLLELHR 136

Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             G++       +  +D F+   E++   +   KTG L   A     + +    + K   
Sbjct: 137 GQGME-------IYWRDNFLCPSESEYKQMTMKKTGGLFMLAVRLMQLFS----DNKSDF 185

Query: 211 RCFGENLGIIFQLADDL 227
                 +G+IFQ+ DD 
Sbjct: 186 SKIAGIIGLIFQIRDDY 202


>gi|317506409|ref|ZP_07964214.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316255289|gb|EFV14554.1| polyprenyl synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 354

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 17/239 (7%)

Query: 2   NGGLPSKLQENSKRIDTILDDL---LLQTASHMQTQHNDRLLSAIRYALLGGKKIR---S 55
              L    QE  + +D  L D    L Q    M   H   + +    A   G+ +R   +
Sbjct: 6   QHSLNEVRQEVVRYVDAPLRDAVSTLAQPLRRMAEYHFGWVEADGTAADPHGRILRRRAA 65

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L    +         A  V AA   +   +L+HDDL  +D+   R G+  V   +    
Sbjct: 66  TLTFLASGSPGSAWERARAVAAANTLLMASALVHDDL--VDHDECRYGRAAVWKAFGAPA 123

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI---QDEFI 172
           A+  G+ LL  AF  +       +D I+ ++          Q M  GQ  +    Q+   
Sbjct: 124 AVHLGDALLALAFRTLRDAPAGARDEIQDRM------AACAQTMYAGQAAETLVEQNRAG 177

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              QV  +   K G  + +   SG + + A  +       FG + G+ FQ  +DL +  
Sbjct: 178 SLEQVIDVAAAKAGNPVEYFVASGVLCSGAPADSVSAAAEFGLSFGMAFQFRNDLENIW 236


>gi|295674851|ref|XP_002797971.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
           brasiliensis Pb01]
 gi|226280621|gb|EEH36187.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
           brasiliensis Pb01]
          Length = 407

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 76/201 (37%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK IR  L+       +V   +   +   +  +H  SL+ 
Sbjct: 87  WSPEKEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLV 146

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  +     I + N +   A E +   ++    N+  + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLRSPNAINVYVKELLN 204

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G+       +         E +   +   KTG L   A +    +  A  + +  
Sbjct: 205 LHRGQGMDVFWRDTLTCP-----TEEEYLEMVGNKTGGLFRLAIK----LMQAESDTEID 255

Query: 210 LRCFGENLGIIFQLADDLLDC 230
                  +G+IFQ+ DD L+ 
Sbjct: 256 CVALANLMGLIFQICDDYLNL 276


>gi|224047852|ref|XP_002194762.1| PREDICTED: similar to geranylgeranyl pyrophosphate synthetase
           [Taeniopygia guttata]
          Length = 299

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 16/197 (8%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + + R+L   +Y L L GK++R+ L        NV       +    E +H  SL+ DD+
Sbjct: 6   ETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIDVTEMLHNASLLVDDI 65

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   + I   N +     E + +        + ++ +L L  
Sbjct: 66  E--DNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHK 123

Query: 153 NIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             GL        +  +D +    E +   +   KTG L   A     + ++  ++ K  L
Sbjct: 124 GQGL-------DIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLL 176

Query: 211 RCFGENLGIIFQLADDL 227
                 LG+ FQ+ DD 
Sbjct: 177 NT----LGLFFQIRDDY 189


>gi|162286815|emb|CAP47201.1| putative geranylgeranyl diphosphate synthase [Aspergillus flavus]
          Length = 340

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 16/213 (7%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
            Q ++  +      +   + Y L   GK IR  L+        +       +   +  +H
Sbjct: 42  PQGSASTEVDKEKIIRGPVDYLLKCPGKDIRRKLMQAFNEWLKIPEDRLNIIAEIVGLLH 101

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   D+  +RRG P  H  +     I + N     A E +          I 
Sbjct: 102 TASLLIDDIQ--DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIF 159

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAH 201
           ++ +L L    G+        L  +D      E +   +   KTG L   A +   + + 
Sbjct: 160 TEELLRLHRGQGM-------DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESE 212

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            + +    +      LGIIFQ+ DD  + + DL
Sbjct: 213 VTSDFLGLVD----LLGIIFQIRDDYQNLQSDL 241


>gi|320583988|gb|EFW98200.1| Geranylgeranyl diphosphate synthase [Pichia angusta DL-1]
          Length = 316

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 15/216 (6%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           +L+  +     ++   L +   Y      GK +RS L+     + NV      ++ A I+
Sbjct: 2   VLVPLSPSWNKENEKTLTTPYHYLADQTQGKHLRSLLIKTFNLVLNVPAEKLEKIEAVID 61

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RR +P  H+ +     I   N +   A  +++        
Sbjct: 62  TLHLSSLLIDDIE--DNSKLRRSRPCSHMIFGVPQTINCANYMYFVAMRLLTDAIENEDK 119

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKTGALMCFACESG 196
            + +Q +        +  +  GQ LD+     +E   E +   +   KTG L   + +  
Sbjct: 120 RLVAQNVFLD----EMVNLHRGQGLDLHWRENNECPSEQEYVNMVMNKTGGLFRLSAKLM 175

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            ++A       ++L      LG+I+Q+ DD L+   
Sbjct: 176 NLLADQP---CDKLITLSNMLGVIYQIKDDYLNLIS 208


>gi|21218742|ref|NP_624521.1| geranylgeranyl pyrophosphate synthase [Streptomyces coelicolor
           A3(2)]
 gi|5748647|emb|CAB53152.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces
           coelicolor A3(2)]
          Length = 392

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 90/253 (35%), Gaps = 39/253 (15%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHN-------DRLLSAIRYALLGGKKIRSFLVTECAS 63
           + +  +D +L  +L +   H +           DRL +       GGK++R+        
Sbjct: 34  DAANAVDAVLRGVLDERLRHCRAVDPLFARELADRLAAL---TARGGKRLRTAFAHCGWR 90

Query: 64  LFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------ 109
                 +    LR GAA+E +   +L+HDD+  MD    RRG P +H+            
Sbjct: 91  AAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHWAAGMH 148

Query: 110 ----QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                +    A++ G+  L +A ++++          R    L          M+ GQ  
Sbjct: 149 GSSESFGTSAAVLTGDLALAWADDLLTETALGTPHGPR----LHGEWRAMRTEMVAGQYR 204

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGII 220
           D+  +    + V     + T     +       +          +  E LR  G   G+ 
Sbjct: 205 DLHAQAARSSGVDEALAIATLKSALYTVARPLALGAVLAGAADGDALEALRAAGRCAGLA 264

Query: 221 FQLADDLLDCEED 233
           FQL DDLL    D
Sbjct: 265 FQLRDDLLGAFGD 277


>gi|269794899|ref|YP_003314354.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
 gi|269097084|gb|ACZ21520.1| geranylgeranyl pyrophosphate synthase [Sanguibacter keddieii DSM
           10542]
          Length = 369

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 91/254 (35%), Gaps = 32/254 (12%)

Query: 10  QENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           ++  +++DT L  +L +  + +   +   D L  A    L GGK++R+            
Sbjct: 12  EDLREQVDTRLRAVLAEQRTVLAGISGDADPLADAWSQMLRGGKRLRAAFAYWSWRAHGG 71

Query: 68  NHL-----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------- 109
                   + + VGAA+E     +L HDD+  MD    RRG PT H              
Sbjct: 72  APGGAEAASIVGVGAALELFQAAALFHDDV--MDRSDTRRGVPTAHRTFAARHRDAGWSG 129

Query: 110 ---QYDEVTAIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLMLSLTHNIGLQG----ML 160
              Q+    AI+ G+  L  + +                ++ + +        G    M 
Sbjct: 130 DADQFGLSAAILLGDLSLVASEDEFLRAVRDVPAAAVAPARSLFTQMRTEVTVGQYLDMH 189

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              +    D   DE +   + + K+    +      GA +A A   +      FG  LG 
Sbjct: 190 AQMLPWTDDFDADERRAREVVRSKSARYSVESPIAIGAALAGADAEQLATCSAFGLPLGE 249

Query: 220 IFQLADDLLDCEED 233
            FQL DDLL    D
Sbjct: 250 AFQLRDDLLGAFGD 263


>gi|291397823|ref|XP_002715374.1| PREDICTED: farnesyl diphosphate synthase [Oryctolagus cuniculus]
          Length = 937

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 88/256 (34%), Gaps = 28/256 (10%)

Query: 1   MNGGLP--SKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG     +  QE     +    I+  L  +   H +T     RL   + Y  +GGK  R
Sbjct: 68  MNGDQKPDAYAQEKQDFIQHFSQIVRVLTEEEMGHPETGDAIARLKEVLEYNAIGGKYNR 127

Query: 55  SFLVT-ECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V      L       A      L VG  +E +  + L+ DD+  MD+   RRG+P  
Sbjct: 128 GLTVLVAFRELVEPRKQDAESLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQPCW 185

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD- 166
           + +          + LL  A  I    K   ++      ++ L      Q  + GQ LD 
Sbjct: 186 YQKPGIGL-DAVNDALLLEA-CIYRLLKFYCREQPYYLNLIELFLQSSYQTEI-GQTLDL 242

Query: 167 -------IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
                  +      E +   I K KT          +   MA    + E    +     +
Sbjct: 243 ITAPQGSVDLSRYTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEM 302

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ DD LD   D
Sbjct: 303 GEFFQIQDDYLDLFGD 318


>gi|73952570|ref|XP_536340.2| PREDICTED: similar to geranylgeranyl diphosphate synthase 1 [Canis
           familiaris]
          Length = 300

 Score =  106 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     + + +        + +  +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLQKVLTLDHPDAVKLFTHQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|282158091|ref|NP_001164089.1| farnesyl pyrophosphate synthase [Tribolium castaneum]
          Length = 425

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 76/237 (32%), Gaps = 19/237 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA---LR 74
            I+ DL          +   R   A+ Y +  GKK R   V     +           +R
Sbjct: 96  DIVRDLTDAGRQTDIPEVTKRYAKALHYNVPNGKKNRGLAVIAAYKMLEKEENLTPENIR 155

Query: 75  VG----AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-----AIIAGNGLLT 125
           +       +E +  + L+ DD+  +D   +RRG P  + + D        AI+  +G+ T
Sbjct: 156 LANIMGWCVELLQGFFLVTDDI--IDRSEMRRGMPCWYKKDDTGLNAFNDAILLEHGIYT 213

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
                 S     +        +   T        L  +      E     +   I K KT
Sbjct: 214 LLKRHFSQHHCYVPTMELFHDVTLKTSMGQALDCLCNKDGKPNLELFTMNKYNSIVKYKT 273

Query: 186 GA-LMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
                         MA+        + +     +G+ FQ+ DD LDC  D     KK
Sbjct: 274 AYYTFQLPVALAMYMANLYDPEMHRQAKTILMEMGLFFQIQDDFLDCFGDPEVTGKK 330


>gi|327262083|ref|XP_003215855.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Anolis
           carolinensis]
          Length = 300

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL    Y L L GK++R+ L        NV       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYHYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I   N +     + + +        + +  +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINCANFIYFLGLQKVLTLDHPDAVKVFTLQLLELHKGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E++   +   KTG L   A     + ++  ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTESEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|158979015|gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita]
          Length = 313

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 6/159 (3%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +   A+   AAI  +H  + +H+ LP  D       KP +  +Y     ++ G+G
Sbjct: 100 ELVGGDRSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPV-SKPAIQHKYGPNVELLTGDG 158

Query: 123 LLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQV 177
           ++ + FE+++    P      +   ++++ ++   G +GM+ G  +  +I D       +
Sbjct: 159 IVPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFI 218

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             + K K G +       GAI+  A++ E ++LR FG  
Sbjct: 219 EYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLY 257


>gi|289774146|ref|ZP_06533524.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
 gi|289704345|gb|EFD71774.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
          Length = 392

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 90/253 (35%), Gaps = 39/253 (15%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHN-------DRLLSAIRYALLGGKKIRSFLVTECAS 63
           + +  +D +L  +L +   H +           DRL +       GGK++R+        
Sbjct: 34  DAANAVDAVLRGVLDERLRHCRAVDPLFARELADRLAAL---TARGGKRLRTAFAHCGWR 90

Query: 64  LFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------ 109
                 +    LR GAA+E +   +L+HDD+  MD    RRG P +H+            
Sbjct: 91  AAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHWAAGMH 148

Query: 110 ----QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                +    A++ G+  L +A ++++          R    L          M+ GQ  
Sbjct: 149 GSSESFGTSAAVLTGDLALAWADDLLTETALGTPHGPR----LHGEWRAMRTEMVAGQYR 204

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGII 220
           D+  +    + V     + T     +       +          +  E LR  G   G+ 
Sbjct: 205 DLHAQAARSSGVDEALAIATLKSALYTVARPLALGAVLAGAADGDALEALRAAGRCAGLA 264

Query: 221 FQLADDLLDCEED 233
           FQL DDLL    D
Sbjct: 265 FQLRDDLLGAFGD 277


>gi|148887805|gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha haplocalyx
           var. piperascens]
          Length = 313

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 6/159 (3%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L   +   A+   AAI  +H  + +H+ LP  D       KP +  +Y     ++ G+G
Sbjct: 100 ELVGGDRSQAMAAAAAIHLVHAAAYVHEHLPLTDGSRPV-SKPAIQHKYGPNVELLTGDG 158

Query: 123 LLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDETQV 177
           ++ + FE+++    P      +   ++++ ++   G +GM+ G  +  +I D       +
Sbjct: 159 IVPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFI 218

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             + K K G +       GAI+  A++ E ++LR FG  
Sbjct: 219 EYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLY 257


>gi|25452945|sp|O24241|FPPS1_PARAR RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase
           1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 1; AltName:
           Full=Dimethylallyltranstransferase 1; AltName:
           Full=Farnesyl diphosphate synthase 1; AltName:
           Full=Geranyltranstransferase 1
 gi|1532050|emb|CAA57892.1| farnesyl diphosphate synthase [Parthenium argentatum]
          Length = 342

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 89/247 (36%), Gaps = 23/247 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L S+     +  DT+  +L+   A          +   + Y + GGK  R   V +
Sbjct: 1   MSSDLKSRF---LQVYDTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVID 57

Query: 61  CASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              L     LT      A  +G  IE +  Y L+ DD+  MD  + RRG+P         
Sbjct: 58  SYQLLKGGELTDNEIFLAAALGWCIEWLQAYFLVLDDI--MDESHTRRGQPCWFRLPKVG 115

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
             I A +G++     +    K   +       +L L + +       GQM+D+    + E
Sbjct: 116 M-IAANDGIILRN-NVPRILKKHFRGKPYYVDLLDLFNEVE-FQTASGQMIDLITTLVGE 172

Query: 175 TQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +          I + KT             +M      + E ++     +G  FQ+ D
Sbjct: 173 KDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMGTYFQVQD 232

Query: 226 DLLDCEE 232
           D LDC  
Sbjct: 233 DYLDCFG 239


>gi|49409613|gb|AAT65717.1| geranylgeranyl diphosphate synthase [Aspergillus flavus]
          Length = 340

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 16/213 (7%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
            Q ++         +   + Y L   GK IR  L+        +       +   +  +H
Sbjct: 42  PQGSASTPVDKEKIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLH 101

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   D+  +RRG P  H  +     I + N     A E +          I 
Sbjct: 102 TASLLIDDIQ--DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIF 159

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAH 201
           ++ +L L    G+        L  +D      E +   +   KTG L   A +   + + 
Sbjct: 160 TEELLRLHRGQGM-------DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESE 212

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            + +    +      LG+IFQ+ DD  + + DL
Sbjct: 213 VTSDFLGLVD----LLGVIFQIRDDYQNLQSDL 241


>gi|153791942|ref|NP_001093301.1| farnesyl diphosphate synthase 2 [Bombyx mori]
 gi|146424708|dbj|BAF62114.1| farnesyl diphosphate synthase 2 [Bombyx mori]
          Length = 382

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 84/243 (34%), Gaps = 28/243 (11%)

Query: 18  TILDDLLLQTASHMQ--------TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH 69
            + DDLL +    +Q         Q  D L   + Y L+GGK  R               
Sbjct: 45  KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIEKPE 104

Query: 70  ---LTALRVGA----AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                 L++       +E    Y ++ DD+  MD   +RRG P  + + +        + 
Sbjct: 105 KVTEHTLKMACKLGWCVEMFQAYCIVLDDI--MDGSSVRRGMPCWYRRPEVGITCAFNDS 162

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI-------QDEFIDET 175
           LL ++  +    KT  + N     M  L  N  L     GQ LD                
Sbjct: 163 LLIHS-SLFEFLKTNFRTNPNYMKMFELF-NETLWRTSMGQHLDHVTGNRKTDYSSFTLD 220

Query: 176 QVFMIQKMKTGA-LMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + + I K K            G ++A +  +   +  +     +G +FQ+ DD +DC  D
Sbjct: 221 RYYTIIKYKAAYYTYNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGD 280

Query: 234 LPK 236
             K
Sbjct: 281 EIK 283


>gi|254551210|ref|ZP_05141657.1| geranylgeranyl pyrophosphate synthetase idsA2 [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
          Length = 352

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 25/230 (10%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS--LFNVNHLTALRVGAAIECIH 83
           + A+HM + ++  +     + L GGK++R                    L + +A+E +H
Sbjct: 18  RAAAHMGSDYDGLIADLEDFVLGGGKRLRPLFAYWGWHTVASREPDPDVLLLFSALELLH 77

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAGNGLLTYA 127
            ++L+HDDL  +D    RRG+PT  ++Y                    AI+ G+    +A
Sbjct: 78  AWALVHDDL--IDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWA 135

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMK 184
            +I+S           +Q  +          +LGGQ LDI  E            +  +K
Sbjct: 136 DDIVSKVCQSALAP-DAQRRVHRVWADIRNEVLGGQYLDIVAEASAAESIESAMNVATLK 194

Query: 185 TG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T    +    + G   A    +       FG +LG+ FQL DD+L    D
Sbjct: 195 TACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGD 244


>gi|164661701|ref|XP_001731973.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966]
 gi|159105874|gb|EDP44759.1| hypothetical protein MGL_1241 [Malassezia globosa CBS 7966]
          Length = 450

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 95/335 (28%), Gaps = 109/335 (32%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE- 60
           +  L S  ++    +   L  L    A+ + + H      A  Y    GK +R  +V   
Sbjct: 11  DDALASLTRDPLDVVGQDLSSLRHNIAALLGSGHPSLDKIAKYYFAAEGKHVRPMIVLLM 70

Query: 61  -----------------------------------------------CASLFNVNHLTAL 73
                                                           A      +  AL
Sbjct: 71  SKATNGLSPAWQAHRVAAVGEHVDLAMSRPDVLNDANPSATNPHIPQAAEASTHPYEPAL 130

Query: 74  ---------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                    R+    E IH  SL+HDD+  +D   +RRG P+    +    +I+ G+ LL
Sbjct: 131 QSTILPTQQRLAEITEMIHVASLLHDDV--IDASPLRRGAPSAPSTFGNKLSILGGDFLL 188

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ--------------------GMLGGQM 164
             A   ++  +      + S ++ +L     +Q                      +  + 
Sbjct: 189 GRASIALARLRDPEVTELMSTVIANLVEGEVMQLKATDSEQVPVTDVQSARPSNEVMERF 248

Query: 165 LDIQDEFIDE-------------TQVFMIQKMKTGALMCFACESGAIMAHA--------- 202
               D+                         +KT +L+  +  S  ++            
Sbjct: 249 WFAYDQGSSSAMSTPGAPNALLFEFYLQKTYLKTASLIAKSARSATVLGGCGTWSNQQSD 308

Query: 203 --------SQNEKERLRCFGENLGIIFQLADDLLD 229
                   +    +    FG N+GI FQL DD+LD
Sbjct: 309 MTPQQRADAATVCDAAYTFGRNVGIAFQLVDDMLD 343


>gi|281346909|gb|EFB22493.1| hypothetical protein PANDA_021734 [Ailuropoda melanoleuca]
          Length = 284

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 15/185 (8%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y+L+ GK++R+ L         V       +    E +H  SL+ DD+   DN  +RRG 
Sbjct: 3   YSLISGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DNSKLRRGF 60

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
           P  H  Y   + I + N +     E + +        + +  +L L    GL        
Sbjct: 61  PVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGL-------D 113

Query: 165 LDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +  +D +    E +   +   KTG L   A     + +   ++ K  L      LG+ FQ
Sbjct: 114 IYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGLFFQ 169

Query: 223 LADDL 227
           + DD 
Sbjct: 170 IRDDY 174


>gi|46117498|ref|XP_384767.1| hypothetical protein FG04591.1 [Gibberella zeae PH-1]
          Length = 368

 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 16/203 (7%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            +H + + + + Y L L GK +RS ++        +       +   I  +H  SL+ DD
Sbjct: 29  ARHEEIIRAPLTYLLNLPGKDVRSKMIAAFNQWLKIPEDKLDVIKRIIMLLHNASLLLDD 88

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +   D+  +RRG P  H  +     I A N     A + +          I ++ +L L 
Sbjct: 89  IQ--DSSKLRRGLPVSHSIFGIAQTINAANYAFFLAQQELPKLGDARAFEIFTEELLHLH 146

Query: 152 HNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G+        +  +D  I   E + F +   KTG L   A +   + + + ++    
Sbjct: 147 RGQGM-------DIYWRDASICPTEEEYFTMVSNKTGGLFRLAVKLMQLASESDKDYVPL 199

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
           +      LG+IFQ+ DD L+ + 
Sbjct: 200 VNV----LGVIFQIRDDYLNLQS 218


>gi|271969419|ref|YP_003343615.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
           43021]
 gi|270512594|gb|ACZ90872.1| trans-hexaprenyltranstransferase [Streptosporangium roseum DSM
           43021]
          Length = 326

 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 15/168 (8%)

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                   +   A +E IH  SL+HDDL  MD    RRG  T++ +  +  A++ G+ +L
Sbjct: 68  GGRIDNRVVTAAACVELIHAGSLVHDDL--MDKAAERRGVRTLNAELGDARALVVGDFML 125

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             A     S  ++      + +++ L            ++ ++ D              K
Sbjct: 126 ARAGLAALSVVSKPVARTLASVVVELAEGQ------FQEVAELFDPGRTPEDALRSITGK 179

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T AL   +C            +   +  +GE  G++FQ+ DDLLD   
Sbjct: 180 TAALFRASCLVA-------HPDGRSMAEYGERFGVLFQILDDLLDLAS 220


>gi|296230923|ref|XP_002760938.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 1
           [Callithrix jacchus]
 gi|296230925|ref|XP_002760939.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 2
           [Callithrix jacchus]
          Length = 300

 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 74/192 (38%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   DN
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DN 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + +  +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTCQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 129 ------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT--- 179

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 180 -LGLFFQIRDDY 190


>gi|328860517|gb|EGG09623.1| hypothetical protein MELLADRAFT_47465 [Melampsora larici-populina
           98AG31]
          Length = 366

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 11/213 (5%)

Query: 25  LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L+        +   LL    Y   + GK+IRS ++        V       +   +  +H
Sbjct: 50  LEALDIWPESNEQILLEPYTYLTNIPGKEIRSMMIDAFNHWLQVPRPALEIIKKIVGQLH 109

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   D+  +RRG P  H  Y     I   N +   A++ ++  K  L+ +  
Sbjct: 110 TASLLMDDVE--DDSDLRRGVPVTHKIYGIPQTINTANYVYFLAYQELTKLKPCLRSDAT 167

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIM 199
           +   L    N  L  +  GQ +D+          E +   +   KTG L   A +   ++
Sbjct: 168 TD--LWSLVNDELLQLHRGQGMDLYWRDSLTCPTEEEYLQMVNNKTGGLFRIAIKL--MI 223

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A +   E          +GIIFQ+ DDLL+   
Sbjct: 224 ALSPIPETPDYLPLVNLVGIIFQIRDDLLNLSS 256


>gi|170117033|ref|XP_001889705.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635285|gb|EDQ99594.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 325

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 20/227 (8%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           + DTILD L          Q+   +L    +     GK+IR  L+    +  NV   T L
Sbjct: 3   KYDTILDTL--SAKPTWSAQNESAILEPFTFITSNPGKEIRGKLIEAFNTWLNVPTDTLL 60

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII-- 131
            +   +  +H  SL+ DD+   D+  +RRGKP  H  Y     I   N +   A++ +  
Sbjct: 61  VITKVVNMLHAASLMVDDIE--DDSQLRRGKPVAHKIYGIPQTINTANYVYFLAYQELFA 118

Query: 132 ------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
                 +SP  +  D + ++ +LSL    GL+ +    +         E +   +   KT
Sbjct: 119 LRNNPTTSPPRKDLDALVTEELLSLHRGQGLEILWRDSLQCP-----SEEEYISMVNNKT 173

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           G L+    +   +MA  + N           +G+ FQ+ DDL++ + 
Sbjct: 174 GGLLRMGVKI--MMACGTTNIGVDYVPLVNLIGVFFQIRDDLMNLQS 218


>gi|242091251|ref|XP_002441458.1| hypothetical protein SORBIDRAFT_09g027190 [Sorghum bicolor]
 gi|241946743|gb|EES19888.1| hypothetical protein SORBIDRAFT_09g027190 [Sorghum bicolor]
          Length = 353

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 85/239 (35%), Gaps = 35/239 (14%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH---LTALR 74
           T+ ++LL   A     + +  +   + Y +LGGK  R   V +   L           + 
Sbjct: 25  TLKEELLTDPAFEFTEESHQWIDRMVDYTVLGGKCNRGLSVVDSYKLLKGADTLSEEEMF 84

Query: 75  VGA----AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
           +       IE +  + L+ DD+  MD  + RRG+P           A+  G  L  +   
Sbjct: 85  LACTLGWCIEWLQAFFLVLDDI--MDESHTRRGQPCWFRVPQVGFIAVNDGIILRNHISR 142

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQ 181
           I+       K       +L L + +       GQ+LD+      E  +          I 
Sbjct: 143 ILRR---HFKGKPYYADLLDLFNEVE-FKTASGQLLDLITTHEGEKDLTKYNITVHGRIV 198

Query: 182 KMKTGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQLADDLLDCEED 233
           + KT             +++       E L  +G  EN+    G  FQ+ DD LDC  D
Sbjct: 199 QYKTAYYSFYLPVACALLLSG------ENLDKYGDVENILVEMGTYFQVQDDYLDCYGD 251


>gi|300122152|emb|CBK22726.2| unnamed protein product [Blastocystis hominis]
          Length = 349

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 88/247 (35%), Gaps = 22/247 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFL-VTECASLFNV 67
           E  +  D +L D+     S +   H  +  ++  I Y  +GGK IR    V    ++ N 
Sbjct: 9   EFVEYKDVLLRDVEEILDSTIIVPHELKQDIIKMIEYNCVGGKMIRGLFAVYSAYAMCNE 68

Query: 68  NHL----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG- 122
            +      A   G   E +    LI DD+  MD   +RRGKP  +         +     
Sbjct: 69  WNEEMKKRAFVAGWGAEMLQGAFLIADDI--MDEAEMRRGKPAWYRIDRIGMMSVNDTFI 126

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDETQ 176
           L +  ++++    + +      Q +      +   G       +  +   I  ++  +  
Sbjct: 127 LQSLIYKLLERVISSVSLFYSVQKVFEDIKFVTELGQMLDLNTINHKTHSINYQYFTKDY 186

Query: 177 VFMIQKMKTGA-LMCFACESGAIMAHASQNEKE--RLRCFGENLGIIFQLADDLLDCEED 233
              I   KT    +      G ++  + +      +LR     LG  FQ+ DD LD   D
Sbjct: 187 YEQIITNKTAYYTIFLPVYLGLVLTESPKETMHSPQLRELCILLGRYFQIRDDFLDAFAD 246

Query: 234 ---LPKK 237
              L K+
Sbjct: 247 PSVLGKE 253


>gi|41053321|ref|NP_956329.1| geranylgeranyl pyrophosphate synthase [Danio rerio]
 gi|30353819|gb|AAH52115.1| Geranylgeranyl diphosphate synthase 1 [Danio rerio]
          Length = 327

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L        NV       +    E +H  SL+ DD+   D+
Sbjct: 13  LLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDDIE--DS 70

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E +   +      + ++ +L L    GL 
Sbjct: 71  SKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLMLEHPEAVRVFTRQLLELHRGQGL- 129

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D +    E +   +   KTG L   A     + +   ++ K  L     
Sbjct: 130 ------DIHWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKRDLKPLLDT--- 180

Query: 216 NLGIIFQLADDL 227
            LG+ FQ+ DD 
Sbjct: 181 -LGLYFQIRDDY 191


>gi|261884768|ref|ZP_06008807.1| geranyltranstransferase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 124

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 4/108 (3%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-LRVGAAIE 80
           +L L          ND L   ++    GGK  R+ L+         +  +A   V AA+E
Sbjct: 8   ELNLPKVDSFHPHFNDSLSWVLK---AGGKHFRAKLLLGVVDALKPDLKSASYPVAAAVE 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            +H YSLIHDDLP MDN  +RRG  T+H++YDEV+A++AG+ L T+A 
Sbjct: 65  MLHTYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVLAGDALNTHAL 112


>gi|255018351|ref|ZP_05290477.1| hypothetical protein LmonF_12731 [Listeria monocytogenes FSL
           F2-515]
          Length = 183

 Score =  104 bits (261), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 3/122 (2%)

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDE 174
           ++AG+ LLT AF I++     L    R  L+  ++ + G +GM+GGQ+ D++ E   +  
Sbjct: 1   MLAGDALLTLAFSILAEDDN-LSFETRIALINQISFSSGAEGMVGGQLADMEAENKHVTL 59

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            ++  I   KTG L+ +A  S A +A A   + +RLR F EN+GI FQ++DD+LD   D 
Sbjct: 60  EELSSIHARKTGELLIYAVTSAAKIAEADLEQTKRLRIFAENIGIGFQISDDILDVIGDE 119

Query: 235 PK 236
            K
Sbjct: 120 TK 121


>gi|115753941|ref|XP_001195950.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115932639|ref|XP_001187762.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 165

 Score =  104 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 16/167 (9%)

Query: 37  DRLLSAIRYALLG-GKKIRSFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLI 88
             L    +Y   G GK  R  +V   + + N++         +  ++    E IH  SL+
Sbjct: 7   PELTEVAQYYFDGKGKSFRPMIVLLMSRVCNLHNSLTESIKDSQKKIAMITEMIHTASLM 66

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  +D    RRGK +++  + +  +I+AG+ +L+ + + ++         + S ++ 
Sbjct: 67  HDDV--IDAADTRRGKTSINELFGQRKSILAGDFVLSISSQALARIGDPDVVIVLSTVIE 124

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
            L     +      Q+    +E    +   M    KT +LM  +C +
Sbjct: 125 DLVKGEFM------QLGSKDNENERFSHYLMKTYKKTASLMAHSCRA 165


>gi|317506405|ref|ZP_07964210.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255285|gb|EFV14550.1| hypothetical protein HMPREF9336_00580 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 221

 Score =  104 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 19/206 (9%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRL-----LSAIRYALLGGKKIRSFLVTE 60
            + L +++  +   + + + +T SH++            ++ IRY   GGK +R+ L T 
Sbjct: 25  SAVLADSAALVFPAVCEAIAETPSHVRRVIEYHFGWDAGVAPIRY---GGKAVRAALATL 81

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                      A+     +E +H  SL+HDD+  +D    RRG+P     +    A++AG
Sbjct: 82  SCEALGGAAALAVDAAVCVELLHNASLLHDDI--IDGDRQRRGRPAAWTVFGVPAAMLAG 139

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---ETQV 177
           + L   A    ++ ++    +   +++ S T       ++ G+ LDI  E       ++V
Sbjct: 140 DALFFLAMGRAAAMQSGTACDSVGKVIDSFTE------VIEGEYLDILLEGRSGATVSEV 193

Query: 178 FMIQKMKTGALMCFACESGAIMAHAS 203
             +   KTGAL+  AC  G   A   
Sbjct: 194 EAMAASKTGALIALACVLGGSAAGVD 219


>gi|159470041|ref|XP_001693168.1| farnesyl diphosphate synthase [Chlamydomonas reinhardtii]
 gi|158277426|gb|EDP03194.1| farnesyl diphosphate synthase [Chlamydomonas reinhardtii]
          Length = 360

 Score =  104 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 81/238 (34%), Gaps = 29/238 (12%)

Query: 17  DTIL-DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH------ 69
           D +L DD L    S       +       Y + GGK  R   V +  +            
Sbjct: 30  DELLNDDCLSPAGSPQAQAAQEWFKEVNDYNVPGGKLNRGMAVYDVLASVKGPDGLSEDE 89

Query: 70  -LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              A  +G  IE +  + L+ DD+  MD    RRG+P  + Q      +IA N  +    
Sbjct: 90  VFKANALGWCIEWLQAFFLVADDI--MDGSITRRGQPCWYKQP--KVGMIACNDYILLEC 145

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--------DETQVFMI 180
            I S  K   + +     ++ L H         GQ+LD+    I         E     I
Sbjct: 146 CIYSILKRHFRGHAAYAQLMDLFHET-TFQTSHGQLLDLTTAPIGSVDLSKYTEDNYLRI 204

Query: 181 QKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENL----GIIFQLADDLLDCEED 233
              KT           G ++A  +           +N+    G  FQ+ DD LDC  D
Sbjct: 205 VTYKTAYYSFYLPVACGMVLAGITDP---AAFDLAKNICVEMGQYFQIQDDYLDCYGD 259


>gi|256790271|ref|ZP_05528702.1| geranylgeranyl pyrophosphate synthase [Streptomyces lividans TK24]
          Length = 375

 Score =  104 bits (260), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 90/253 (35%), Gaps = 39/253 (15%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHN-------DRLLSAIRYALLGGKKIRSFLVTECAS 63
           + +  +D +L  +L +   H +           DRL +       GGK++R+        
Sbjct: 17  DAANAVDAVLRGVLDERLRHCRAVDPLFARELADRLAAL---TARGGKRLRTAFAHCGWR 73

Query: 64  LFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------ 109
                 +    LR GAA+E +   +L+HDD+  MD    RRG P +H+            
Sbjct: 74  AAGGSGDATAVLRTGAALELLQACALVHDDV--MDGSVQRRGAPALHVDLARGHWAAGMH 131

Query: 110 ----QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                +    A++ G+  L +A ++++          R    L          M+ GQ  
Sbjct: 132 GSSESFGTSAAVLTGDLALAWADDLLTETALGTPHGPR----LHGEWRAMRTEMVAGQYR 187

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA-----SQNEKERLRCFGENLGII 220
           D+  +    + V     + T     +       +          +  E LR  G   G+ 
Sbjct: 188 DLHAQAARSSGVDEALAIATLKSALYTVARPLALGAVLAGAADGDALEALRAAGRCAGLA 247

Query: 221 FQLADDLLDCEED 233
           FQL DDLL    D
Sbjct: 248 FQLRDDLLGAFGD 260


>gi|320163837|gb|EFW40736.1| geranyltranstransferase [Capsaspora owczarzaki ATCC 30864]
          Length = 347

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 97/247 (39%), Gaps = 23/247 (9%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           +  +L++     DT++ D++    +  +T  +    +   ++Y + GGK  R   V    
Sbjct: 3   MSEQLKQFLAVFDTLVADVMDVAVNQYETPKESQQWMSENLKYNVPGGKMNRGLSVVSTY 62

Query: 63  SLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            +     LT      A  +G ++E +  + L+ DD+  MD    RRG+P  + + +    
Sbjct: 63  EILLGRPLTKDELFKAQVLGWSVEWLQAFFLVADDM--MDQSQTRRGQPCWYKKPEVSNI 120

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFID 173
            I  + ++  +  I+   K   +       +L L H +  Q  L GQMLD     ++ +D
Sbjct: 121 AINDSFVIEGSIYIL--LKKYFRSEPYYVDLLDLLHEVTFQTEL-GQMLDLITAPEDHVD 177

Query: 174 ETQ-----VFMIQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADD 226
            T+        I K KT              MA   +             +G  FQ+ DD
Sbjct: 178 LTRFTLSKYKTIVKYKTAVYSFYLPVAMAMHMAGVKNPAAFAAAHSILMEMGEFFQIQDD 237

Query: 227 LLDCEED 233
            LDC  D
Sbjct: 238 YLDCYGD 244


>gi|307324121|ref|ZP_07603330.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306890570|gb|EFN21547.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 378

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 16/194 (8%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK +R  L   CA     +   A+    A+E +H +SL+HDD+  MD    RR +PTV
Sbjct: 83  AGGKGVRQALAVLCAEAAGASGEAAVAGAVAVELVHTFSLLHDDI--MDGDQTRRTRPTV 140

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
              Y    A++AG+           + +                 ++ L  ++ GQ  D+
Sbjct: 141 WKAYGTGPAVLAGDA------LFALAVEALAAVPGAGAAAAVRRLSVALGDLVRGQADDL 194

Query: 168 QDEF--------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             E         +   +   + + KTGAL+  A   GA +A A ++    L   G ++G+
Sbjct: 195 LFESRPWTGATAVGPEEYRRMAEHKTGALLGCAAALGAALAGAPESTAAALDRAGRHMGV 254

Query: 220 IFQLADDLLDCEED 233
            FQ+ADDLL    D
Sbjct: 255 AFQVADDLLGIWGD 268


>gi|317150999|ref|XP_001824349.2| hypothetical protein AOR_1_1410094 [Aspergillus oryzae RIB40]
          Length = 585

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 76/205 (37%), Gaps = 16/205 (7%)

Query: 33  TQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            Q +  +   + Y L   GK IR  L+        +       +   +  +H  SL+ DD
Sbjct: 295 IQSDQIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLIDD 354

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +   D+  +RRG P  H  +     I + N     A E +          I ++ +L L 
Sbjct: 355 IQ--DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLH 412

Query: 152 HNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G+        L  +D      E +   +   KTG L   A +   + +  + +    
Sbjct: 413 RGQGM-------DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVTSDFLGL 465

Query: 210 LRCFGENLGIIFQLADDLLDCEEDL 234
           +      LGIIFQ+ DD  + + DL
Sbjct: 466 VD----LLGIIFQIRDDYQNLQSDL 486



 Score = 38.2 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 23/121 (19%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH   ++ DD+   D    R+G+P  H  Y         N       ++++    +  + 
Sbjct: 100 IHLCLMLVDDIS--DGSDYRKGRPAAHHIYGP---SETANRAYYRVTQLLNRTVHEFPE- 153

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----------TQVFMIQKMKTGALMC 190
             +  +L       L+ +L GQ L +                       +  +KTGAL  
Sbjct: 154 -LAPWLLQC-----LEEILEGQDLSLVWRRDGLSAFPVQPEERVAAYRQMAYLKTGALFR 207

Query: 191 F 191
            
Sbjct: 208 L 208


>gi|168070550|ref|XP_001786852.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660326|gb|EDQ48334.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 367

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 10/127 (7%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
               + ++    R +  L +L+      ++  H D +         GGK+IR  LV   +
Sbjct: 251 DTFTNGVKAPLLRFEEALSELVQSDVLFVRLIHQDLV-------TAGGKRIRPRLVFLAS 303

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                     + +  A+E +H  +L+HDDL  +D+   RRGK     +Y    ++++G  
Sbjct: 304 RALGGAPFE-MELALAVELLHSATLLHDDL--IDDAETRRGKEAAFRKYGNAVSVLSGIF 360

Query: 123 LLTYAFE 129
               +F 
Sbjct: 361 SFRGSFM 367


>gi|242815971|ref|XP_002486676.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218715015|gb|EED14438.1| polyprenyl-diphosphate synthase, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 960

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 11/185 (5%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L GK +RS L+    +   V   +   +   I  +H  SL+ DD+   D   +RRG+P  
Sbjct: 682 LPGKNMRSQLIQSFNTWLQVPAESLAIIDKVISMLHTASLLIDDIQ--DQSLLRRGQPVA 739

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           H  +    A+ +GN +   A   I   ++     I    ++ L    G++      ++  
Sbjct: 740 HSIFGTAQAMNSGNYVYFLALREIQKLQSPKAITIYVDSLIDLHRGQGMELFWRDSLMCP 799

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                 E +   +   KTG L C A +    +  A    K         LGIIFQ+ DD 
Sbjct: 800 -----TEEEYLDMVANKTGGLFCLAIQ----LMQAEATVKVDFVPLVRLLGIIFQICDDY 850

Query: 228 LDCEE 232
           L+ + 
Sbjct: 851 LNLKS 855


>gi|289704967|ref|ZP_06501382.1| polyprenyl synthetase [Micrococcus luteus SK58]
 gi|289558303|gb|EFD51579.1| polyprenyl synthetase [Micrococcus luteus SK58]
          Length = 371

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 84/257 (32%), Gaps = 35/257 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECAS 63
           P+        +   LD LL +     +  H     L+ AI     GGK++R+ L      
Sbjct: 12  PADQDRFRAAVADALDRLLAEHRDLARDVHPLTAPLVDAIADLTAGGKRLRAVLAWLGWR 71

Query: 64  LFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------- 111
                         GAA E     +LIHDD+  +D    RRG P+VH ++          
Sbjct: 72  AAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LDRSDTRRGMPSVHRRFESLHREAGWR 129

Query: 112 ------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                     AI+AG+  L  +    +          R++  L         G++ GQ L
Sbjct: 130 HAAEHFGVSAAILAGDVALGMSETAFARVLAGTPREDRARAELERMR----FGVMAGQYL 185

Query: 166 DIQDEFIDETQVFMIQK--------MKTG-ALMCFACESGAIMAHASQNEKERLRCFGEN 216
           D+  E     +     +         K+           G ++A A              
Sbjct: 186 DVVAEMAPAARDAREAEAAAEAVVEHKSARYSAVHPLALGGLLAGADDGLVTAFARVSLP 245

Query: 217 LGIIFQLADDLLDCEED 233
            G+ FQ  DDLL    D
Sbjct: 246 FGMAFQYRDDLLGVFGD 262


>gi|239917873|ref|YP_002957431.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
 gi|239839080|gb|ACS30877.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
          Length = 373

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 85/257 (33%), Gaps = 35/257 (13%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHN--DRLLSAIRYALLGGKKIRSFLVTECAS 63
           P+        +   LD LL +     +  H     L+ AI     GGK++R+ L      
Sbjct: 14  PADQDRFRAAVADALDRLLAEHRELARGIHPLTAPLVDAIADLTAGGKRLRAVLAWLGWR 73

Query: 64  LFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY---------- 111
                         GAA E     +LIHDD+  +D    RRG P+VH ++          
Sbjct: 74  AAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LDRSDTRRGMPSVHRRFESLHREAGWR 131

Query: 112 ------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                     AI+AG+  L  +    +          R++  L+        G++ GQ L
Sbjct: 132 HAAEHFGVSAAILAGDVALGMSETAFARVLAGTPREDRARAELARMR----FGVMAGQYL 187

Query: 166 DIQDEFIDETQVFMIQK--------MKTG-ALMCFACESGAIMAHASQNEKERLRCFGEN 216
           D+  E     +     +         K+           G ++A A              
Sbjct: 188 DVVAEMAPAARDAREAEAAAEAVVEHKSARYSAVHPLALGGLLAGADDGLVTAFARVSLP 247

Query: 217 LGIIFQLADDLLDCEED 233
            G+ FQ  DDLL    D
Sbjct: 248 FGMAFQYRDDLLGVFGD 264


>gi|282864692|ref|ZP_06273747.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
 gi|282560631|gb|EFB66178.1| Polyprenyl synthetase [Streptomyces sp. ACTE]
          Length = 689

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 17/156 (10%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           HDD+  MD+ Y RRG+P+ +  + +  AI+AG+ ++     +++    +      +    
Sbjct: 91  HDDV--MDHAYERRGRPSANALWGQHLAILAGDCVMLSGLGMLAELGRREVAEGVAASER 148

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS----- 203
                    GM+  +  D+      E         KT  L   AC  GA+ A+ +     
Sbjct: 149 MCA------GMVR-ESADLHAASRSEESYLQAVGGKTAELFALACRLGAMQANGNGGRQE 201

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
              +E L  FG  LG  +QL DD+LD     E+L K
Sbjct: 202 DGREEALAGFGWQLGHAYQLRDDILDLTSTAEELGK 237


>gi|320012344|gb|ADW07194.1| Polyprenyl synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 374

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 6/187 (3%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +R  L   CA        +A+    A+E +H +SL+HDD+  MD    RR + TV  
Sbjct: 85  GKGVRQALAVLCAEAAGAPPDSAVAAAVAVELVHTFSLLHDDI--MDGDGTRRQRETVWK 142

Query: 110 QYDEVTAIIAGNGLLTYAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            Y    A++AG+ LL  A + ++    P T +     S+ +  L        +L  +   
Sbjct: 143 AYGTGPAVLAGDALLALAVQTLAEAPGPLTAVAVGRLSETLSGLARGQAEDLLLAARPWT 202

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                    +   + ++KTG L+  A   G ++  A +     L   G +LG+ FQ  DD
Sbjct: 203 GPGAVRT-DEYRAMAELKTGTLLGCAAALGGLLGGAPEPVVAALDRAGRHLGVAFQAVDD 261

Query: 227 LLDCEED 233
           LL    D
Sbjct: 262 LLGIWGD 268


>gi|225678401|gb|EEH16685.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
           brasiliensis Pb03]
          Length = 407

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 76/201 (37%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK IR  L+       +V   +   +   +  +H  SL+ 
Sbjct: 87  WSPEKEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLV 146

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  +     I + N +   A E +   +     ++  + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLRNPNAIDVYVKELLN 204

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G+       +         E +   +   KTG L   A +     +  ++ +   
Sbjct: 205 LHRGQGMDVFWRDTLTCP-----TEEEYLDMVGNKTGGLFRLAIKLMQAESG-TEIDCVA 258

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L      +G+IFQ+ DD L+ 
Sbjct: 259 LANL---MGLIFQICDDYLNL 276


>gi|1491641|emb|CAA59170.1| dimethylallyltransferase [Capsicum annuum]
          Length = 342

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 87/235 (37%), Gaps = 26/235 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-------TALR 74
           +LL            + +   + Y + GGK  R   V +  SL +            A  
Sbjct: 18  ELLNDPGFEFTDDSREWVDKMLEYNVPGGKLNRGLSVIDSYSLVDDGKELTRDEIFKASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MDN + RRG+P  +        A+  G  L  +   I+  
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWYKVEKVGMIAVNDGILLRNHISRIL-- 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKT 185
            K   +       +L L + +       GQM+D+    + E  +          I + KT
Sbjct: 134 -KNHFRPKSYYVDLLDLFNEVE-FQTASGQMIDLITTHVGEKDLSKYSLPIHCRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                        +MA  + +    ++     +GI FQ+ DD LDC  D   L K
Sbjct: 192 AYYSFYLPVACALLMAGENLDNHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK 246


>gi|45190369|ref|NP_984623.1| AEL238Cp [Ashbya gossypii ATCC 10895]
 gi|74693865|sp|Q758K0|GGPPS_ASHGO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|44983265|gb|AAS52447.1| AEL238Cp [Ashbya gossypii ATCC 10895]
          Length = 320

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 72/213 (33%), Gaps = 18/213 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++LL Q  +H+ TQ               GK  R+ L+      + ++      V   +E
Sbjct: 19  EELLRQPYNHLVTQ--------------PGKNFRNTLIRVFNGFYGLSERQVAAVTELVE 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN   RRG    H+ Y     I   N +   +  ++     Q   
Sbjct: 65  MLHVASLLIDDIE--DNSAWRRGVAAAHVVYGSPMTINTANYMYFVSMSLLGQLAAQRPA 122

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
                L+      +       G  +  +D F    E     +   KTG L          
Sbjct: 123 GPLQDLLKVFNEEMMNLHRGQGLDIYWRDTFTVPSEHDYLRMVMHKTGGLFRLTVRIMEA 182

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +          L      LG+++Q+ DD L+  
Sbjct: 183 LREGPDGPGSTLVPLSNLLGVLYQVRDDYLNLT 215


>gi|115465209|ref|NP_001056204.1| Os05g0543400 [Oryza sativa Japonica Group]
 gi|52353430|gb|AAU43998.1| putative farnesyl pyrophosphate synthase [Oryza sativa Japonica
           Group]
 gi|113579755|dbj|BAF18118.1| Os05g0543400 [Oryza sativa Japonica Group]
 gi|215707197|dbj|BAG93657.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215712400|dbj|BAG94527.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632427|gb|EEE64559.1| hypothetical protein OsJ_19411 [Oryza sativa Japonica Group]
          Length = 355

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 94/257 (36%), Gaps = 36/257 (14%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           GG+  + +E  +    + ++LL   A          +   + Y + GGK  R   V +  
Sbjct: 12  GGVDKEKEEFKQIYGVLKEELLRDPAFEFTDSSRQWIDRMLDYNVPGGKCNRGLSVVDSY 71

Query: 63  SLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            L          +   A  +G  +E +  Y L+ DD+  MD+ + RRG+P          
Sbjct: 72  KLLKGTNVLSQEDMFLASTLGWCVEWLQAYFLVLDDI--MDDSHTRRGQPCWFRVPQVGS 129

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            AI  G  L  +   ++   +   +  +    +L L + +       GQ+LD+      E
Sbjct: 130 IAINDGIILRNHITRML---RLHFRGKLYYADLLDLFNEVE-FKTASGQLLDLITTHEGE 185

Query: 175 TQV--------FMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGE------NLGI 219
             +          I + KT             +++       E L  +G        +GI
Sbjct: 186 KDLNKYNIGVHRRIVQYKTSYYSFYLPVACALLLSG------EDLTKYGAVEDILVKMGI 239

Query: 220 IFQLADDLLDCEEDLPK 236
            FQ+ DD LDC  D PK
Sbjct: 240 YFQVQDDYLDCYGD-PK 255


>gi|218197202|gb|EEC79629.1| hypothetical protein OsI_20844 [Oryza sativa Indica Group]
          Length = 355

 Score =  104 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 94/257 (36%), Gaps = 36/257 (14%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           GG+  + +E  +    + ++LL   A          +   + Y + GGK  R   V +  
Sbjct: 12  GGVDKEKEEFKQIYGVLKEELLRDPAFEFTDSSRQWIDRMLDYNVPGGKCNRGLSVVDSY 71

Query: 63  SLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            L          +   A  +G  +E +  Y L+ DD+  MD+ + RRG+P          
Sbjct: 72  KLLKGTNVLSQEDMFLASTLGWCVEWLQAYFLVLDDI--MDDSHTRRGQPCWFRVPQVGS 129

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            AI  G  L  +   ++   +   +  +    +L L + +       GQ+LD+      E
Sbjct: 130 IAINDGVILRNHITRML---RLHFRGKLYYADLLDLFNEVE-FKTASGQLLDLITTHEGE 185

Query: 175 TQV--------FMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGE------NLGI 219
             +          I + KT             +++       E L  +G        +GI
Sbjct: 186 KDLNKYNIGVHRRIVQYKTSYYSFYLPVACALLLSG------EDLTKYGAVEDILVKMGI 239

Query: 220 IFQLADDLLDCEEDLPK 236
            FQ+ DD LDC  D PK
Sbjct: 240 YFQVQDDYLDCYGD-PK 255


>gi|239977900|ref|ZP_04700424.1| putative polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 312

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +  TAL    A+E +H +SL+HDD+  MD   +RR +P V 
Sbjct: 82  GGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDI--MDGDPLRRRRPAVW 139

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    A++AG+ L   A + ++    +        L  +LT       ++ GQ  D++
Sbjct: 140 RAYGVGPAVLAGDALHALAVQTLAEAPGERAPAAVRHLSRTLTA------LVRGQADDLR 193

Query: 169 DEFIDET 175
            E +  T
Sbjct: 194 FEELPWT 200


>gi|169846410|ref|XP_001829920.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130]
 gi|116508947|gb|EAU91842.1| farnesyltranstransferase [Coprinopsis cinerea okayama7#130]
          Length = 325

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 87/225 (38%), Gaps = 22/225 (9%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           D ILD L          +    +L    +     GK+IR  L+       NV       +
Sbjct: 5   DNILDRL--SREPEWSPEFESAILEPFTFTTSNPGKEIRGKLIDAFNLWLNVPDDKLQVI 62

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +  +H  SL+ DD+   D+  +RRG P  H  Y     I + N +   AF+ + + +
Sbjct: 63  AKIVNMLHAASLMVDDIE--DDSQLRRGNPVAHKIYGIPQTINSANYVYFLAFQELFALR 120

Query: 136 T------QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
                  Q  D + +Q +LSL    GL+ +    +         E Q   +   KTG L+
Sbjct: 121 NGPTPPRQDIDQMVTQELLSLHRGQGLEILWRDSLQCP-----TEEQYIDMVSNKTGGLL 175

Query: 190 CFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               +     +  ++  +    +  F    G+ FQ+ DDL++ + 
Sbjct: 176 RLGIKLMMACSTTNSDVDYTPLVSLF----GVYFQIRDDLMNLQS 216


>gi|227873689|ref|ZP_03991923.1| possible Farnesyltranstransferase [Oribacterium sinus F0268]
 gi|227840478|gb|EEJ50874.1| possible Farnesyltranstransferase [Oribacterium sinus F0268]
          Length = 175

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 5/97 (5%)

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
           Q +  L  + G++GM+GGQ+LDI+   + + E ++F I K KT AL+  + E GA++  A
Sbjct: 14  QGLKILAKSAGIEGMIGGQVLDIEKTGQPLTEEELFFIYKKKTAALLSASLEIGALLGGA 73

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD---CEEDLPK 236
           +  E+E+L  FGE +G+ FQ+ DD+LD      +L K
Sbjct: 74  NPEEQEKLSSFGEKIGLAFQIRDDILDEISSFSELGK 110


>gi|87133512|gb|ABD24398.1| geranylgeranyl pyrophosphate synthase [Dietzia sp. CQ4]
          Length = 382

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 64/203 (31%), Gaps = 21/203 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +RS L     +               A+E +H   L+HDD+   D    RRG+P + 
Sbjct: 77  GKGMRSALFDAVYTHAGGRDEAVRAAACQALELLHEAFLVHDDVA--DGDDHRRGRPNLQ 134

Query: 109 IQYDEVTAII-----------------AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
            +     A                    G+ LL  A    +          R+   +   
Sbjct: 135 GRTTTRGAEQGLSRETAAHVGMVGGLLGGDLLLVAAMGEFARLPVPAPVLHRAMAEVEGA 194

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERL 210
               + G           E   +     I   KT A  +      G ++A   +     L
Sbjct: 195 VVASIAGEYADVHGAAHGEPTTQEHALAIGAAKTAAYSVTLPMVLGVVLAGGPEEMIPPL 254

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           R  G +LG  +Q+ DD+L    D
Sbjct: 255 RETGRHLGTAYQVVDDVLGVFGD 277


>gi|93279242|pdb|2DH4|A Chain A, Geranylgeranyl Pyrophosphate Synthase
 gi|93279243|pdb|2DH4|B Chain B, Geranylgeranyl Pyrophosphate Synthase
 gi|149241336|pdb|2E8T|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Fspp And Ipp
 gi|149241337|pdb|2E8T|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Fspp And Ipp
 gi|149241342|pdb|2E8U|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ipp (P21)
 gi|149241343|pdb|2E8U|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ipp (P21)
 gi|149241348|pdb|2E8V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Product Ggpp (P21)
 gi|149241349|pdb|2E8V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Product Ggpp (P21)
 gi|149241352|pdb|2E8W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ipp
 gi|149241353|pdb|2E8W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ipp
 gi|149241356|pdb|2E8X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|149241357|pdb|2E8X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Gpp
 gi|149241362|pdb|2E90|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Pyrophosphate And Fpp
 gi|149241363|pdb|2E90|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Pyrophosphate And Fpp
 gi|149241366|pdb|2E91|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-91
 gi|149241367|pdb|2E91|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-91
 gi|149241372|pdb|2E92|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-261
 gi|149241373|pdb|2E92|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-261
 gi|149241378|pdb|2E93|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-629
 gi|149241379|pdb|2E93|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-629
 gi|149241382|pdb|2E94|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-364
 gi|149241383|pdb|2E94|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-364
 gi|149241388|pdb|2E95|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-675
 gi|149241389|pdb|2E95|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-675
 gi|187609232|pdb|2Z7H|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Inhibitor Bph-210
 gi|187609233|pdb|2Z7H|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Inhibitor Bph-210
 gi|193506615|pdb|2Z4V|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ggpp (Inhibitory Site)
 gi|193506616|pdb|2Z4V|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Ggpp (Inhibitory Site)
 gi|193506617|pdb|2Z4W|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-749
 gi|193506618|pdb|2Z4W|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-749
 gi|193506619|pdb|2Z4X|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-252 (P21)
 gi|193506620|pdb|2Z4X|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-252 (P21)
 gi|193506621|pdb|2Z4Y|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-252
 gi|193506622|pdb|2Z4Y|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-252
 gi|193506623|pdb|2Z4Z|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-Sc01
 gi|193506624|pdb|2Z4Z|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-Sc01
 gi|193506625|pdb|2Z50|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-28
 gi|193506626|pdb|2Z50|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-28
 gi|193506627|pdb|2Z52|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-23
 gi|193506628|pdb|2Z52|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium And Bph-23
 gi|193885258|pdb|2Z78|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-806
 gi|193885259|pdb|2Z78|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-806
 gi|193885260|pdb|2Z7I|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Inhibitor Bph-742
 gi|193885261|pdb|2Z7I|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Inhibitor Bph-742
 gi|218766582|pdb|2ZEU|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-715
 gi|218766583|pdb|2ZEU|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Bph-715
 gi|218766584|pdb|2ZEV|A Chain A, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp And Bph-715
 gi|218766585|pdb|2ZEV|B Chain B, S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase In
           Complex With Magnesium, Ipp And Bph-715
          Length = 340

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 15/223 (6%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTAL 73
           +++  +D+L+        +Q+   +     + LL  GK  R  L+ +   + N+      
Sbjct: 5   KMEAKIDELI-NNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLA 63

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            V   +E +H  SL+ DD+   DN  +RRG+ T H+ +   + I   N +   A +++S 
Sbjct: 64  IVSQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQ 121

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGA 187
             T+          L    N  L  +  GQ LDI            +     +   KTG 
Sbjct: 122 LTTKEP----LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGG 177

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           L          ++  S +    L  F   LGII+Q+ DD L+ 
Sbjct: 178 LFRLTLRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNL 219


>gi|123505919|ref|XP_001329081.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
 gi|121912032|gb|EAY16858.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
          Length = 334

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 40  LSAIRYALLGGKKIRSFLVTEC---ASLFNVNHLTA---LRVGAAIECIHCYSLIHDDLP 93
           L  + Y+  GGK  R  +       ++  + +   A     +G  +E +    LI DD  
Sbjct: 35  LEVLDYSTKGGKLTRGVVCASAFIESTGCDPDSEEAKIGYTIGWVLELMQAAFLIADD-- 92

Query: 94  SMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
            MD    RRG    +        A+     +   AF ++ S +++L  NI+S   L    
Sbjct: 93  FMDQSETRRGMICWYKIESVNEQAVNDAMIVENLAFVLLDSVRSKL--NIKSYARLVQYL 150

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR- 211
                    GQ LD  ++        +  + KT      A     ++A       ++   
Sbjct: 151 RTINTITTMGQTLDFINKTKSFESYEVSVRNKTSHYSLCAPIILGLIASQKFEVTDKFES 210

Query: 212 --CFGENLGIIFQLADDLLDCEED 233
              F   LG  FQ+ DD  D   D
Sbjct: 211 IEKFALRLGYYFQVQDDYFDVYGD 234


>gi|324515875|gb|ADY46342.1| Farnesyl pyrophosphate synthase [Ascaris suum]
          Length = 338

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 78/207 (37%), Gaps = 15/207 (7%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLVTECASLFN--VNHLTALRVG---AAIECIHCYSLIHD 90
            +R+     +A++GGK +R  L+    +  +         +V    A +E +  + LI D
Sbjct: 34  ANRIDKLFEHAVIGGKCVRGRLLVAAYNALDRHATRERIQQVATVGACLEILQAFFLIFD 93

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           D+  MD    RRGKP  H   D    AI  G  L +   E+++       +      +  
Sbjct: 94  DV--MDRSTTRRGKPCWHTLPDVGLNAINDGLLLDSVINEVLNDVLENDPNKDTVSSIFL 151

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
                  Q  + GQMLD     +      +   I   KT    CFA    A++       
Sbjct: 152 RAK----QMTVIGQMLDNSTSGLKDCTWERYGDIVTHKTSYYTCFAPLRVAMLLADRFMY 207

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
            +        LG +FQ  DD LDC  D
Sbjct: 208 ADETERIAFKLGYLFQAQDDYLDCFGD 234


>gi|270656515|ref|ZP_06222316.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212]
 gi|270317032|gb|EFA28689.1| octaprenyl-diphosphate synthase [Haemophilus influenzae HK1212]
          Length = 127

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK+IR  +    A         ++     +E IH  SL+HDD+  +D   +RRG+ T +
Sbjct: 49  GGKRIRPLIAVLAARSLGFEGSNSITCATFVEFIHTASLLHDDV--VDESDMRRGRATAN 106

Query: 109 IQYDEVTAIIAGNGLLTYAFE 129
            ++    +++ G+ + T AF+
Sbjct: 107 AEFGNAASVLVGDFIYTRAFQ 127


>gi|195608286|gb|ACG25973.1| farnesyl pyrophosphate synthetase [Zea mays]
          Length = 355

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 84/238 (35%), Gaps = 35/238 (14%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTAL 73
           +++L   A     +    +   + Y +LGGK  R   V +   +              A 
Sbjct: 30  EEMLDDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVIDSYRILKGVDVLSKEETFLAC 89

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIIS 132
            +G  IE +  Y L+ DD+  MDN   RRG+P           A+  G  L  +   I+ 
Sbjct: 90  TLGWCIEWLQAYFLVLDDI--MDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQ 147

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMK 184
                 K       ++ L + +       GQMLD+      E  +          I + K
Sbjct: 148 R---HFKGKPYYVDVIDLFNEVE-FKTASGQMLDLITTHEGEKDLTKYNLTVRRHIVQYK 203

Query: 185 TGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQLADDLLDCEEDLP 235
           T             ++A       E L  FG  +N+    G  FQ+ DD LDC  DL 
Sbjct: 204 TAYYSFYLPVACALLLAG------ENLDNFGDVKNILVEMGTYFQVQDDYLDCFGDLK 255


>gi|325192521|emb|CCA26954.1| farnesyl pyrophosphate synthetase putative [Albugo laibachii Nc14]
          Length = 346

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 93/250 (37%), Gaps = 26/250 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
              L + +    +    +L++LL      M       +   I Y   GGK  R   + +C
Sbjct: 4   TSELQAFMAVWEELKQEVLENLL--KTYGMPIDAKKWVQDFIEYNCTGGKLNRGLSLLQC 61

Query: 62  AS-LFNVNHLTALR-----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EV 114
           +  LF       +      +G  IE +    L+ DD+  MD   +RR +P  +     ++
Sbjct: 62  SQILFGPEMTAGISRKVCILGWCIEWLQASCLVIDDI--MDQSAVRRRRPCWYRNSKVQM 119

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---- 170
            AI     L++  F++I   +           ++ L  ++  +  L GQ+LD   +    
Sbjct: 120 IAINDSFLLVSIVFQVI---RNHFHGEDYYADLIELFRDVIQKTEL-GQLLDATCQPHER 175

Query: 171 -----FIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQL 223
                     +   I   KT             ++   + +E ++  R +   +GI FQ+
Sbjct: 176 PPDLSRFTTERYEKIVTYKTAFYTFYMPVACAMLLRGLNDSELDQIARSYCIEIGIYFQI 235

Query: 224 ADDLLDCEED 233
            DD LDC  D
Sbjct: 236 QDDFLDCYGD 245


>gi|241951352|ref|XP_002418398.1| dimethylallyltranstransferase, putative; farnesyl diphosphate
           synthetase, putative; farnesyl pyrophosphate synthetase,
           putative; geranyltranstransferase, putative [Candida
           dubliniensis CD36]
 gi|223641737|emb|CAX43698.1| dimethylallyltranstransferase, putative [Candida dubliniensis CD36]
          Length = 351

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 36/257 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRS 55
           M+  L +K     +R   + +DL+ +        +M  +  D  + ++ Y   GGK  R 
Sbjct: 1   MSDKLVAK-----ERFLNVFEDLIKELKQILLSYNMPQEAIDWFIKSLNYNTPGGKLNRG 55

Query: 56  FLVTECASLFNVNHLTALR---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
             V +  ++ N      L          +G AIE +  Y L+ DD+  MD    RRG+P 
Sbjct: 56  LSVVDTYAILNNTTSDKLNDTEYKKVAILGWAIELLQAYFLVADDM--MDQSKTRRGQPC 113

Query: 107 VHIQYD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            ++       AI   + +L  A  I+   K   + +     +L L H +  Q  L GQ+L
Sbjct: 114 WYLVEGVNNIAIN-DSFMLEGAIYIL--LKNHFRQDPYYVDLLDLFHEVTFQTEL-GQLL 169

Query: 166 D--IQDEFI------DETQVFMIQKMKTGAL-MCFACESGAIMAH-ASQNEKERLRCFGE 215
           D    DE I         +   I   KT              M+   ++ + ++++    
Sbjct: 170 DLITADEEIVDLNKFSLDKHSFIVIFKTAYYSFYLPVVLAMYMSGINNEKDLKQVKDILI 229

Query: 216 NLGIIFQLADDLLDCEE 232
            LG  FQ+ DD LDC  
Sbjct: 230 PLGEYFQIQDDFLDCFG 246


>gi|115738308|ref|XP_781908.2| PREDICTED: similar to Chain  , Avian Farnesyl Diphosphate Synthase
           (Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus]
 gi|115948816|ref|XP_001196369.1| PREDICTED: similar to Chain  , Avian Farnesyl Diphosphate Synthase
           (Fps) (E.C.2.5.1.10) [Strongylocentrotus purpuratus]
          Length = 619

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 83/238 (34%), Gaps = 16/238 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---- 65
           Q   K    ++D+L    A+             + Y + GGK+ R   V           
Sbjct: 282 QTFEKVFHELVDELTDDAANPEVIDAAAWFKEMLVYTVPGGKRNRGLTVVNAFRQLANSV 341

Query: 66  ---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-VTAIIAGN 121
                N  TA+ +G  +E +  Y LI DD+  MD    RRG+P  + +      AI    
Sbjct: 342 QNTEDNIHTAMVLGWCVEWLQAYFLIADDM--MDQSKTRRGQPCWYKKDGVGNVAINDSF 399

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG----MLGGQMLDIQDEFIDETQV 177
            +    ++++          ++   +   T    + G    +L     D       E + 
Sbjct: 400 YVEACIYKLLKRYIGHQPYYVQVMELFHETTYQTIMGQSLDLLTSPENDRDLNRFTEQRY 459

Query: 178 FMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             I K KT     +  E+ A+  +  +        +     +G  FQ+ DD LDC  +
Sbjct: 460 AAIVKWKTAFYSFYLPEALAMHMVGISDAKSHTNAKTILLQMGHFFQVQDDYLDCYGE 517


>gi|93278758|pdb|2AZJ|A Chain A, Crystal Structure For The Mutant D81c Of Sulfolobus
           Solfataricus Hexaprenyl Pyrophosphate Synthase
 gi|93278759|pdb|2AZJ|B Chain B, Crystal Structure For The Mutant D81c Of Sulfolobus
           Solfataricus Hexaprenyl Pyrophosphate Synthase
          Length = 289

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 23/220 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E    ID +++  L        +  +  L+    Y L  GK+ R  L          +  
Sbjct: 17  EAKATIDRLIEQFL-------NSNRDWDLVDISSYILKDGKRFRGTLNMFFTVALGGDIK 69

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +     AIE +H  SL   D+  +D    RRG     + Y     I   N L+  A  I
Sbjct: 70  DSYGGALAIEILHSASLALCDI--VDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALRI 127

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I +       N   + +   T    L+ M             D +      ++KTG+L  
Sbjct: 128 IQTSYGDDALNTSIE-LWKDTSVGALRDM------------YDNSDYIRTIELKTGSLFK 174

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +    A  +    N K+++   G+ LGII+Q+ DD +D 
Sbjct: 175 LSTVLSAYASKH-YNTKQQMLDVGKYLGIIYQVIDDFVDY 213


>gi|157072593|gb|ABV08819.1| farnesyl diphosphate synthetase [Salvia miltiorrhiza]
 gi|315019238|gb|ADT70780.1| farnesyl pyrophosphate synthase [Salvia miltiorrhiza]
          Length = 349

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 82/232 (35%), Gaps = 23/232 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALR 74
           +LL   A          +   + Y + GGK  R   V +   L              A  
Sbjct: 25  ELLNDPAFEWTDGSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKGGKDLTDDEVFLASA 84

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  +E +  Y L+ DD+  MDN + RRG+P           AI  G  L  +   I+  
Sbjct: 85  LGWCVEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGMIAINDGIILRNHIPRIL-- 140

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +       +L L + +       GQM+D+      E  +          I + KT
Sbjct: 141 -KKHFRTKPYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKT 198

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                        +MA     +   ++    N+GI FQ+ DD LDC  +  K
Sbjct: 199 AYYSFYLPVACALLMAGEDLEKHPTVKDVLINMGIYFQVQDDYLDCFGEPEK 250


>gi|317028384|ref|XP_001389988.2| farnesyltranstransferase [Aspergillus niger CBS 513.88]
          Length = 344

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 42  AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
            + Y L   GK IR   +        +       +   +  +H  SL+ DD+   DN  +
Sbjct: 63  PLDYLLKSPGKDIRRKFIHAFNEWLRIPEEKLNIITEIVGLLHTASLLIDDIQ--DNSKL 120

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG P  H  +     I + N     A E +          I ++ +L L    G+    
Sbjct: 121 RRGLPVAHSIFGIAQTINSANYAYFLAQERLRELNHPEAYEIYTEELLRLHRGQGM---- 176

Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
               L  +D      E     +   KTG L   A +    +       K  +    + LG
Sbjct: 177 ---DLYWRDSLTCPTEEDYIEMIANKTGGLFRLAIK----LMQLETETKSYVIELADLLG 229

Query: 219 IIFQLADDL 227
           +IFQ+ DD 
Sbjct: 230 VIFQIRDDY 238


>gi|325068635|ref|ZP_08127308.1| Polyprenyl synthetase [Actinomyces oris K20]
          Length = 386

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 100/276 (36%), Gaps = 48/276 (17%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQT--QHNDRLLSAIRYALLGGKKIRSFLVTE 60
             LP+ L      ++  L  +L       +   Q    LL A    L GGK++R+ L   
Sbjct: 2   SALPAALGRVRPAVEHRLTQVLEDCHLRWEDLGQAAPELLEAAGSVLSGGKRMRAVLGAV 61

Query: 61  CASLFNVNHL--------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY- 111
             ++ +             A+ +G A+E     +L+HDDL  MD+   RRG P  H  + 
Sbjct: 62  GCAILSAPKQRAERLTGSDAVHLGTALELYQASALVHDDL--MDSADTRRGLPAAHRVFA 119

Query: 112 ---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI-- 154
                              AI+ G+ LL+ A E +S+       +      +    +   
Sbjct: 120 RNHEARGWLGRPQTFGANGAILLGDLLLSLAGEEMSALAPSRASSQTRSSAVRYARSAFD 179

Query: 155 -GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESG------------- 196
                +  GQ LD++ E +    D+      ++M+  AL     +S              
Sbjct: 180 AMTTEVALGQFLDVRSENLPLPWDQEAGAAARRMQDEALSVVRHKSARYSVRHPLLIGAL 239

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 S    E L  FGE++GI FQL DD L    
Sbjct: 240 LAGLDPSGTTAEHLAAFGEDVGIAFQLRDDDLGVFG 275


>gi|56756931|gb|AAW26637.1| SJCHGC02430 protein [Schistosoma japonicum]
          Length = 386

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 92/281 (32%), Gaps = 49/281 (17%)

Query: 2   NGGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
              L  K +E  +  ++  D    LL +              + + Y L  GK+IR  LV
Sbjct: 3   TADLHIKFREVKEIFESYFDTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRGVLV 62

Query: 59  TECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
                +F   +    R       +G  +E +H   L+ DD+  +DN  +RRG+P  H+  
Sbjct: 63  VLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDI--IDNSTLRRGQPCWHLTQ 120

Query: 112 DEV----TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM---------LSLTHNIGLQG 158
             +      I  G  L+  A  +I S   Q +D +   +          L    +     
Sbjct: 121 ANLNRGLIGINDGLHLVLSAKYVIHSLFFQYQDTVNLHMWKDQNNVCLKLCKLFDEISYK 180

Query: 159 MLGGQMLDIQD----------------------EFIDETQVFMIQKMKTG-ALMCFACES 195
              GQ LDI                             +    I   KTG          
Sbjct: 181 TCSGQCLDILSSNPNNQCLLNGKHNGLEFDSFTRNYSPSVFEAITHWKTGLYSFYLPVAC 240

Query: 196 GAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
           G I+A    +   E ++     LG  FQ  DD LDC  D  
Sbjct: 241 GMILAEVDIDGIFENVQHILLRLGNYFQAQDDYLDCFGDSE 281


>gi|323352034|gb|EGA84573.1| Bts1p [Saccharomyces cerevisiae VL3]
          Length = 301

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 15/221 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           +  +D+L+        +Q+   +     + LL  GK  R  L+ +   + N+       V
Sbjct: 2   EAKIDELI-NNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIV 60

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E +H  SL+ DD+   DN  +RRG+ T H+ +   + I   N +   A +++S   
Sbjct: 61  SQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLT 118

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGALM 189
           T+          L    N  L  +  GQ LDI            +     +   KTG L 
Sbjct: 119 TKEP----LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLF 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                    ++  S +    L  F   LGII+Q+ DD L+ 
Sbjct: 175 RLTLRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNL 214


>gi|323331234|gb|EGA72652.1| Bts1p [Saccharomyces cerevisiae AWRI796]
          Length = 292

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 15/221 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           +  +D+L+        +Q+   +     + LL  GK  R  L+ +   + N+       V
Sbjct: 2   EAKIDELI-NNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIV 60

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E +H  SL+ DD+   DN  +RRG+ T H+ +   + I   N +   A +++S   
Sbjct: 61  SQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLT 118

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGALM 189
           T+          L    N  L  +  GQ LDI            +     +   KTG L 
Sbjct: 119 TKEP----LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLF 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                    ++  S +    L  F   LGII+Q+ DD L+ 
Sbjct: 175 RLTLRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNL 214


>gi|301105393|ref|XP_002901780.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4]
 gi|262099118|gb|EEY57170.1| farnesyl pyrophosphate synthetase [Phytophthora infestans T30-4]
          Length = 345

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 81/228 (35%), Gaps = 23/228 (10%)

Query: 26  QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-------TALRVGAA 78
           +T   +     D +   + Y  +GGK  R   V  C                 A  +G  
Sbjct: 24  RTKLQLPQDALDWVDEVVEYNCIGGKLNRGISVVHCTQAMAPGKELTPELKEKASVLGWC 83

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE +  + LI DD+  MD    RRG+P  + + +    I   +  L  AF +    K   
Sbjct: 84  IEWLQAFFLIADDI--MDESITRRGQPCWYRKPNVKM-IAINDAFLLEAF-VFQILKKHF 139

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---------ETQVFMIQKMKTGALM 189
           +       ++   H++     + GQ+LD+  + +D           +   I   KT    
Sbjct: 140 RSEPYYVDLVETFHDVVFHTEI-GQLLDLTSQPLDGEVYLDRFTVERYRQIVINKTAYYT 198

Query: 190 CFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +   + A+  +    +      +     +G  FQ+ DD LDC  D  
Sbjct: 199 FYLSAACAMFLNGVVDEASHSLAKNICVQIGEYFQIQDDFLDCYGDEK 246


>gi|225462001|ref|XP_002272641.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296089967|emb|CBI39786.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 20/227 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRV 75
           +LL   A          +   + Y + GGK  R   V +   L     LT      A  +
Sbjct: 18  ELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVL 77

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  IE +  Y L+ DD+  MDN + RRG+P           I A +G++    +I    K
Sbjct: 78  GWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGM-IAANDGVILRN-QIPRILK 133

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGA 187
              K       +L L + +       GQM+D+      E  +          I + KT  
Sbjct: 134 NHFKGKPYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAY 192

Query: 188 L-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                      +MA  + +    ++     +GI FQ+ DD LDC  D
Sbjct: 193 YSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 239


>gi|12231184|dbj|BAB20976.1| putative GGPP synthase [Sonchus oleraceus]
          Length = 126

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 3/125 (2%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIG 155
           N   RRGKPT HI Y E  A++AG+ LL+++FE I+      +  +   + +  L   IG
Sbjct: 1   NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHIAYMATKGVSSDRILRAIGELAKCIG 60

Query: 156 LQGMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            +G++ GQ++DI  E  D     +  I   KT AL+  +   GAIM   S  E E+L+  
Sbjct: 61  SEGLVAGQVVDICSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLQNL 120

Query: 214 GENLG 218
            + LG
Sbjct: 121 RDRLG 125


>gi|302538600|ref|ZP_07290942.1| predicted protein [Streptomyces sp. C]
 gi|302447495|gb|EFL19311.1| predicted protein [Streptomyces sp. C]
          Length = 355

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 17/238 (7%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVN 68
              +   D++ D       +        R L  +R  +L GGK++R  L+ E A+L   +
Sbjct: 13  ARFAAYFDSLTDPAGGMFETPPHGAFPSRALDLVRDMSLRGGKRLRVVLLYEAAALVADD 72

Query: 69  HLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
            L  L     +IE +  + LIHDD+  +D+  +RRG P+ +  Y           L    
Sbjct: 73  GLAGLDEAAISIELLQTHGLIHDDI--IDDAPVRRGGPSTYYAYRHEFPDQPDTALALAL 130

Query: 128 FEIISSPKTQLK-------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
                +    L+          R+  M ++  + G   M  GQM+D++ +F     +  +
Sbjct: 131 LAGDLAAFLSLRVLLTSGLPADRALAMAAVHADTGAATM-TGQMIDLERDFHPAPGIDFL 189

Query: 181 QKMK----TGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDLLDCEED 233
             +     T   +      G + A A     +  LR +   LGI  Q+ DD LD   D
Sbjct: 190 HAVTEFKSTRYSVLAPLRMGLLAAGADHTPYDAELRRYATALGIANQIHDDWLDLFGD 247


>gi|50289191|ref|XP_447025.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526334|emb|CAG59958.1| unnamed protein product [Candida glabrata]
          Length = 332

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 14/215 (6%)

Query: 24  LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L+++         + +     + A   GK  R+ L+      + ++      +   +E +
Sbjct: 9   LIESPPAWSQSDENSINQPYNHIASNPGKNFRAKLIHLFNQFYLLDENIIQTLTQIVEIL 68

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SLI DD+   DN  +RRG    H+ Y    +I   N +   A +++ +    L  + 
Sbjct: 69  HNSSLIIDDIE--DNSQLRRGVVASHMLYGVPMSINTANYMYFVAMDLLRN----LSHDA 122

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGALMCFACESG 196
            +   L    N  L  +  GQ LDI            E   F +   KTG L     +  
Sbjct: 123 VTSNDLMKIFNEELLYLHRGQGLDIYWRDSLPKVVPTEEMYFNMVMNKTGGLFRLTLKIM 182

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             ++   Q + + L   G  LGII+Q+ DD L+  
Sbjct: 183 ERLSEYWQGQ-KSLVPLGNLLGIIYQVRDDYLNLT 216


>gi|118616234|ref|YP_904566.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans
           Agy99]
 gi|118568344|gb|ABL03095.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium ulcerans
           Agy99]
          Length = 330

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 26/203 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH- 108
           GK +RS  +          +  AL   A++E +H ++L+ DD+  MD    RRG P VH 
Sbjct: 96  GKCLRSTFMYLGWLCGAGPNNAALSAAASLELLHAFALLQDDV--MDQSPQRRGSPAVHV 153

Query: 109 ---------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
                           ++ E  A++ G+  L +A +++     +   + R + +      
Sbjct: 154 QLARCHQRRGLSGAAARFGESAAVLLGDICLVWAEQMLRESGVE---DRRLRQVWPRYDA 210

Query: 154 IGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER 209
           + +  +  GQ+ D+ ++         V  + + K+G   +    E GA MA   +   E+
Sbjct: 211 MRI-ELAVGQLCDLSNDIRNLSTLDAVLDVARRKSGNYTVRRPLEMGAAMADCDERTLEQ 269

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
           L  +G+ +G  FQL DD+L    
Sbjct: 270 LARYGDAVGEAFQLRDDMLGVFG 292


>gi|190407883|gb|EDV11148.1| hypothetical protein SCRG_02424 [Saccharomyces cerevisiae RM11-1a]
          Length = 335

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 15/221 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           +  +D+L+        +Q+   +     + LL  GK  R  L+ +   + N+       V
Sbjct: 2   EAKIDELI-NNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIV 60

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E +H  SL+ DD+   DN  +RRG+ T H+ +   + I   N +   A +++S   
Sbjct: 61  SQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLT 118

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGALM 189
           T+          L    N  L  +  GQ LDI            +     +   KTG L 
Sbjct: 119 TKEP----LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLF 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                    ++  S +    L  F   LGII+Q+ DD L+ 
Sbjct: 175 RLTLRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNL 214


>gi|33340604|gb|AAQ14872.1|AF330037_1 truncated farnesyl diphosphate synthase [Zea mays]
          Length = 341

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 33/246 (13%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-- 67
              ++   T+ ++LL   A     +    +   + Y +LGGK  R   V +   L     
Sbjct: 5   AAFARIYKTLKEELLTDPAFEFTEESRQWIDRMVDYNVLGGKCNRGLSVVDSYKLLKGAD 64

Query: 68  -----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    A  +G  IE +  + L+ DD+  MD+ + RRG+P           I A +G
Sbjct: 65  ALGEEETFLACTLGWCIEWLQAFFLVLDDI--MDDSHTRRGQPCWFRVPQVGL-IAANDG 121

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---- 178
           ++     I    +   K       +L L + +       GQ+LD+      E  +     
Sbjct: 122 IILRN-HISRILRRHFKGKPYYADLLDLFNEVE-FKTASGQLLDLITTHEGEKDLTKYNI 179

Query: 179 ----MIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQLADDL 227
                I + KT             +++       E L  +G  EN+    G  FQ+ DD 
Sbjct: 180 TVHGRIVQYKTAYYSFYLPVACALLLSG------ENLDNYGDVENILVEMGTYFQVQDDY 233

Query: 228 LDCEED 233
           LDC  D
Sbjct: 234 LDCYGD 239


>gi|297800392|ref|XP_002868080.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313916|gb|EFH44339.1| hypothetical protein ARALYDRAFT_493157 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 342

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 26/235 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR------- 74
           DLL   +     +    L   + Y + GGK  R   V +   L         +       
Sbjct: 18  DLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKLLKQGQDLTEKETFLSCA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MDN   RRG+P    +      AI  G  L  +   I+  
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRIL-- 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----FMIQK----MKT 185
            K   ++      ++ L + +  Q    GQM+D+   F  E  +      I +     KT
Sbjct: 134 -KKHFREMPYYVDLVDLFNEVEFQTAC-GQMIDLITTFDGEKDLSKYSLQIHRRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                        +MA  +      ++    ++GI FQ+ DD LDC  D   L K
Sbjct: 192 AYYSFYLPVACALLMAGENLENHTDVKNVLVDMGIYFQVQDDYLDCFADPETLGK 246


>gi|162462162|ref|NP_001105039.1| farnesyl pyrophosphate synthase [Zea mays]
 gi|1346033|sp|P49353|FPPS_MAIZE RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|33340602|gb|AAQ14871.1|AF330036_1 farnesyl diphosphate synthase [Zea mays]
 gi|662368|gb|AAB39276.1| farnesyl pyrophosphate synthetase [Zea mays]
 gi|194702348|gb|ACF85258.1| unknown [Zea mays]
 gi|194708184|gb|ACF88176.1| unknown [Zea mays]
 gi|195623932|gb|ACG33796.1| farnesyl pyrophosphate synthetase [Zea mays]
          Length = 350

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 33/246 (13%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-- 67
              ++   T+ ++LL   A     +    +   + Y +LGGK  R   V +   L     
Sbjct: 14  AAFARIYKTLKEELLTDPAFEFTEESRQWIDRMVDYNVLGGKCNRGLSVVDSYKLLKGAD 73

Query: 68  -----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                    A  +G  IE +  + L+ DD+  MD+ + RRG+P           I A +G
Sbjct: 74  ALGEEETFLACTLGWCIEWLQAFFLVLDDI--MDDSHTRRGQPCWFRVPQVGL-IAANDG 130

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF---- 178
           ++     I    +   K       +L L + +       GQ+LD+      E  +     
Sbjct: 131 IILRN-HISRILRRHFKGKPYYADLLDLFNEVE-FKTASGQLLDLITTHEGEKDLTKYNI 188

Query: 179 ----MIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQLADDL 227
                I + KT             +++       E L  +G  EN+    G  FQ+ DD 
Sbjct: 189 TVHGRIVQYKTAYYSFYLPVACALLLSG------ENLDNYGDVENILVEMGTYFQVQDDY 242

Query: 228 LDCEED 233
           LDC  D
Sbjct: 243 LDCYGD 248


>gi|62199628|gb|AAX76910.1| farnesyl diphosphate synthase [Vitis vinifera]
          Length = 341

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 20/227 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH--LTALRVGAA- 78
           +LL   A          +   + Y + GGK  R   V +   L          + +    
Sbjct: 18  ELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKLLQGRQLTDDEVFLACVL 77

Query: 79  ---IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IE +  Y L+ DD+  MDN + RRG+P           I A +G++    +I    K
Sbjct: 78  GLCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGM-IAANDGVILRN-QIPRILK 133

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGA 187
              K       +L L + +       GQM+D+      E  +          I + KT  
Sbjct: 134 NHFKGKPYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAY 192

Query: 188 L-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                      +MA  + +    ++     +GI FQ+ DD LDC  D
Sbjct: 193 YSFHLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 239


>gi|6325188|ref|NP_015256.1| Bts1p [Saccharomyces cerevisiae S288c]
 gi|74676512|sp|Q12051|GGPPS_YEAST RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName: Full=BET2 suppressor
           protein 1; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|1079673|gb|AAB68296.1| Bts1p: geranylgeranyl diphosphate synthase [Saccharomyces
           cerevisiae]
 gi|1098641|gb|AAA83262.1| Bts1p [Saccharomyces cerevisiae]
 gi|51013155|gb|AAT92871.1| YPL069C [Saccharomyces cerevisiae]
 gi|151942726|gb|EDN61072.1| geranylgeranyl diphosphate synthase [Saccharomyces cerevisiae
           YJM789]
 gi|207340526|gb|EDZ68851.1| YPL069Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270516|gb|EEU05700.1| Bts1p [Saccharomyces cerevisiae JAY291]
 gi|259150089|emb|CAY86892.1| Bts1p [Saccharomyces cerevisiae EC1118]
 gi|285815470|tpg|DAA11362.1| TPA: Bts1p [Saccharomyces cerevisiae S288c]
 gi|323302759|gb|EGA56565.1| Bts1p [Saccharomyces cerevisiae FostersB]
 gi|323346212|gb|EGA80502.1| Bts1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 335

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 15/221 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           +  +D+L+        +Q+   +     + LL  GK  R  L+ +   + N+       V
Sbjct: 2   EAKIDELI-NNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIV 60

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E +H  SL+ DD+   DN  +RRG+ T H+ +   + I   N +   A +++S   
Sbjct: 61  SQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLT 118

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGALM 189
           T+          L    N  L  +  GQ LDI            +     +   KTG L 
Sbjct: 119 TKEP----LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLF 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                    ++  S +    L  F   LGII+Q+ DD L+ 
Sbjct: 175 RLTLRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNL 214


>gi|134057661|emb|CAK38059.1| unnamed protein product [Aspergillus niger]
          Length = 346

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 42  AIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
            + Y L   GK IR   +        +       +   +  +H  SL+ DD+   DN  +
Sbjct: 63  PLDYLLKSPGKDIRRKFIHAFNEWLRIPEEKLNIITEIVGLLHTASLLIDDIQ--DNSKL 120

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
           RRG P  H  +     I + N     A E +          I ++ +L L    G+    
Sbjct: 121 RRGLPVAHSIFGIAQTINSANYAYFLAQERLRELNHPEAYEIYTEELLRLHRGQGM---- 176

Query: 161 GGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CFGEN 216
               L  +D      E     +   KTG L   A +    +       K ++      + 
Sbjct: 177 ---DLYWRDSLTCPTEEDYIEMIANKTGGLFRLAIK----LMQLETETKRQVYVIELADL 229

Query: 217 LGIIFQLADDL 227
           LG+IFQ+ DD 
Sbjct: 230 LGVIFQIRDDY 240


>gi|256084091|ref|XP_002578266.1| dimethylallyltransferase; farnesyl pyrophosphate synthase;
           geranyltranstransferase [Schistosoma mansoni]
 gi|238663632|emb|CAZ34504.1| dimethylallyltransferase [Schistosoma mansoni]
          Length = 401

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 89/281 (31%), Gaps = 49/281 (17%)

Query: 2   NGGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
              +  K +E  +  +   +   +LL                +   Y L  GK+IR  LV
Sbjct: 3   TSDIHIKYREVKENFENYFNTFVNLLRHVHPKSLELAEQHFQNVTSYNLSSGKRIRGVLV 62

Query: 59  TECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
                +F+  +  + +       +G  +E +H   L+ DD+  +DN  +RRG+P  H   
Sbjct: 63  VLSYMVFSNKNENSRKNLSCVYLIGWCVELLHAGFLVLDDI--IDNSTLRRGQPCWHCTQ 120

Query: 112 --DEVTAIIAGNGLLT------YAFEIISSPKTQL-----KDNIRSQLMLSLTHNIGLQG 158
                  I   +GL            + +  ++ +     KD     L L    +     
Sbjct: 121 IDSNRGLIGVNDGLHLILSSKYLIHSLFAENQSDVDSYSWKDKNNVYLKLCKLFDEISYK 180

Query: 159 MLGGQMLDIQD----------------------EFIDETQVFMIQKMKTG-ALMCFACES 195
              GQ LD+                                  I   KTG          
Sbjct: 181 TCSGQCLDVLSSNPNNQCILDRKQNNLEFDSFTRNYSPDVFEAITHWKTGFYTFYLPVAC 240

Query: 196 GAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
           G I+A    ++  + ++     LG  FQ  DD LDC  D  
Sbjct: 241 GMILAEVDTDDIFKSVQHILLKLGNYFQAQDDYLDCFGDSE 281


>gi|323335062|gb|EGA76352.1| Bts1p [Saccharomyces cerevisiae Vin13]
          Length = 335

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 15/221 (6%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRV 75
           +  +D+L+        +Q+   +     + LL  GK  R  L+ +   + N+       V
Sbjct: 2   EAKIDELI-NNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIV 60

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              +E +H  SL+ DD+   DN  +RRG+ T H+ +   + I   N +   A +++S   
Sbjct: 61  SQIVELLHNSSLLIDDIE--DNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLT 118

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGALM 189
           T+          L    N  L  +  GQ LDI            +     +   KTG L 
Sbjct: 119 TKEP----LYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLF 174

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                    ++  S +    L  F   LGII+Q+ DD L+ 
Sbjct: 175 RLTLRLMEALS-PSSHHGHSLVPFINLLGIIYQIRDDYLNL 214


>gi|162538563|gb|ABY19313.1| farnesyl diphosphate synthase 2 [Myzus persicae]
 gi|168831500|gb|ACA35007.1| putative mitochondrial isoprenyl diphosphate synthase precursor
           [Myzus persicae]
 gi|169139042|gb|ACA48700.1| farnesyl diphosphate synthase 2 [Myzus persicae]
          Length = 396

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 89/234 (38%), Gaps = 25/234 (10%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHL 70
            I+ DL   +    +      L + ++Y + GGK  R  ++     +        + N  
Sbjct: 66  DIVKDLTDTSLQLNKPDVTKWLENLLQYNVPGGKNNRGLILVSSFKMLSSPSYLTDENLR 125

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            +  +G  +E +  Y L+ DDL  MDN   RRG+P  +   D    A+  G  L    ++
Sbjct: 126 LSYILGWCVEILQAYQLVMDDL--MDNAITRRGRPCWYRHNDVGLMAVNDGILLEQAIYQ 183

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMI 180
           ++   K   KD      +L L +++ ++    GQ LD+           E         I
Sbjct: 184 LL---KKYFKDKPYYTHILELFYDVTMKS-AMGQCLDMLTAKSFKSKKLEKYTMENYKAI 239

Query: 181 QKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
            K KT              M + +  E   + +    ++G  FQ+ DD LDC  
Sbjct: 240 VKYKTAYYSFVLPVCLAMRMTNVNDQEIFRQAKVILLDMGQFFQIQDDYLDCYG 293


>gi|83773087|dbj|BAE63215.1| unnamed protein product [Aspergillus oryzae]
          Length = 303

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 74/201 (36%), Gaps = 16/201 (7%)

Query: 37  DRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
             +   + Y L   GK IR  L+        +       +   +  +H  SL+ DD+   
Sbjct: 9   QIIRGPVDYLLKCPGKDIRRKLMQAFNEWLRIPEDRLNIIAEIVGLLHTASLLIDDIQ-- 66

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RRG P  H  +     I + N     A E +          I ++ +L L    G
Sbjct: 67  DSSKLRRGIPVAHSIFGVAQTINSANYAYFAAQEKLRELNRPKAYEIFTEELLRLHRGQG 126

Query: 156 LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +        L  +D      E +   +   KTG L   A +   + +  + +    +   
Sbjct: 127 M-------DLYWRDSLTCPTEEEYIEMISNKTGGLFRLAIKLMQLESEVTSDFLGLVD-- 177

Query: 214 GENLGIIFQLADDLLDCEEDL 234
              LGIIFQ+ DD  + + DL
Sbjct: 178 --LLGIIFQIRDDYQNLQSDL 196


>gi|226290540|gb|EEH46024.1| geranylgeranyl pyrophosphate synthetase [Paracoccidioides
           brasiliensis Pb18]
          Length = 407

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 75/201 (37%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK IR  L+       +V   +   +   +  +H  SL+ 
Sbjct: 87  WSPEKEKILLGPYDYMVQQPGKDIRRQLIAAFNRWLHVPEESLAIITKVVVMLHTASLLV 146

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  +     I + N +   A   +   +     ++  + +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALGEVQKLRNPNAIDVYVKELLN 204

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G+       +         E +   +   KTG L   A +     +  ++ +   
Sbjct: 205 LHRGQGMDVFWRDTLTCP-----TEEEYLDMVGNKTGGLFRLAIKLMQAESG-TEIDCVA 258

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L      +G+IFQ+ DD L+ 
Sbjct: 259 LANL---MGLIFQICDDYLNL 276


>gi|226480790|emb|CAX73492.1| dimethylallyltranstransferase [Schistosoma japonicum]
          Length = 386

 Score =  102 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 92/281 (32%), Gaps = 49/281 (17%)

Query: 2   NGGLPSKLQENSKRIDTILD---DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
              L  K +E  +  ++  D    LL +              + + Y L  GK+IR  LV
Sbjct: 3   TADLHIKFREVKEIFESYFDTFVSLLHRGYPKSLELAKQHFQNVVSYNLSSGKRIRGVLV 62

Query: 59  TECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
                +F   +    R       +G  +E +H   L+ DD+  +DN  +RRG+P  H+  
Sbjct: 63  VLSYLVFRNKNDDPKRSLSFVYLIGWCVELLHAGFLVLDDI--IDNSTLRRGQPCWHLTQ 120

Query: 112 DEV----TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM---------LSLTHNIGLQG 158
             +      I  G  L+  A  +I S   Q +D +   +          L    +     
Sbjct: 121 ANLNRGLIGINDGLHLVLSAKYVIHSLFFQNQDTVNLHMWKDQNNVCLKLCKLFDEISYK 180

Query: 159 MLGGQMLDIQD----------------------EFIDETQVFMIQKMKTG-ALMCFACES 195
              GQ LDI                             +    I   KTG          
Sbjct: 181 TCSGQCLDILSSNPNNQCLLNGKHNGLEFDSFTRNYSPSVFEAITHWKTGLYSFYLPVAC 240

Query: 196 GAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDLP 235
           G I+A    +   E ++     LG  FQ  DD LDC  D  
Sbjct: 241 GMILAEVDIDGIFENVQHILLRLGNYFQAQDDYLDCFGDSE 281


>gi|195624442|gb|ACG34051.1| farnesyl pyrophosphate synthetase [Zea mays]
          Length = 355

 Score =  102 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 91/258 (35%), Gaps = 39/258 (15%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +    +  +E   ++    +++L   A     +    +   + Y +LGGK  R   V + 
Sbjct: 14  SADTKTVFKETYSKLK---EEMLDDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVIDS 70

Query: 62  ASLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             +              A  +G  IE +  Y L+ DD+  MDN   RRG+P         
Sbjct: 71  YRILKGVDVLSKEETFLACTLGWCIEWLQAYFLVLDDI--MDNSQTRRGQPCWFRVPQVG 128

Query: 115 -TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             A+  G  L  +   I+       K       ++ L + +       GQMLD+      
Sbjct: 129 LIAVNDGIILRNHISRILQR---HFKGKPYYVDVIDLFNEVE-FKTASGQMLDLITTHEG 184

Query: 174 ETQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----G 218
           E  +          I + KT             ++A       E L  FG  +N+    G
Sbjct: 185 EKDLTKYNLTVRRHIVQYKTAYYSFYLPVACALLLAG------ENLDNFGDVKNILVEMG 238

Query: 219 IIFQLADDLLDCEEDLPK 236
             FQ+ DD LDC  D PK
Sbjct: 239 TYFQVQDDYLDCFGD-PK 255


>gi|312078710|ref|XP_003141856.1| polyprenyl synthetase [Loa loa]
 gi|307762977|gb|EFO22211.1| polyprenyl synthetase [Loa loa]
          Length = 346

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 17/205 (8%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDD 91
           DR+     +++ GGK  RS L+                       A +E +  + LI DD
Sbjct: 46  DRIEKLFDHSVCGGKYKRSILLVTAYKALGGKQDEEQMKMITNTAACLELLQSFFLIEDD 105

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MD G  RRGKP  H            +GLL       +    ++   +R        
Sbjct: 106 V--MDEGVNRRGKPCWHRLEGIGM-NGINDGLLLDCMVSYTLRSNRIPAAVR------DA 156

Query: 152 HNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            +   +  + GQ+LD   + +++    +   I + KT     F     A ++ A     E
Sbjct: 157 FDEARRVTVLGQILDSDTKGVEDCTWQRHRTITQHKTSHYTYFTPLQIAALSTAQPLIIE 216

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L+     LG +FQ  DD +DC  D
Sbjct: 217 PLKRIAYQLGYLFQSKDDYMDCFGD 241


>gi|242054143|ref|XP_002456217.1| hypothetical protein SORBIDRAFT_03g032280 [Sorghum bicolor]
 gi|241928192|gb|EES01337.1| hypothetical protein SORBIDRAFT_03g032280 [Sorghum bicolor]
          Length = 356

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 85/251 (33%), Gaps = 32/251 (12%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
               +  +E   ++    +++L   A     +    +   + Y +LGGK  R   V +  
Sbjct: 16  ADTKAAFKETYSKLK---EEMLQDPAFEFTDESLQWIDRMVDYNVLGGKCNRGLSVIDSY 72

Query: 63  SLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            +              A  +G  IE +  Y L+ DD+  MDN   RRG+P          
Sbjct: 73  KILKGVDVLSKEETFLACTLGWCIEWLQAYFLVLDDI--MDNSQTRRGQPCWFRVPQVGL 130

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A+  G  L  +   I+          +    + +        G L   +   + E  D 
Sbjct: 131 IAVNDGIILRNHISRILQRHFKGKPYYVDLIDLFNEVEFKTASGQLLDLITTHEGEK-DL 189

Query: 175 TQV-----FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQ 222
           T+        I + KT             ++A       E L  FG  +N+    G  FQ
Sbjct: 190 TKYNLTVHRRIVQYKTAYYSFYLPVACALLLAG------ENLDNFGDVKNILVEMGTYFQ 243

Query: 223 LADDLLDCEED 233
           + DD LDC  D
Sbjct: 244 VQDDYLDCFGD 254


>gi|238882238|gb|EEQ45876.1| farnesyl pyrophosphate synthetase [Candida albicans WO-1]
          Length = 351

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 28/253 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           M+  L ++ +      + ++++L     S+ M  +  +  + ++ Y   GGK  R   V 
Sbjct: 1   MSDKLAAR-ERFLDVFEDLVEELKQILVSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVV 59

Query: 60  ECASLFNVNHLTALR---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           +  ++ N      L          +G AIE +  Y L+ DD+  MD    RRG+P  ++ 
Sbjct: 60  DTFAILNNTTSDKLNDTEYKKVALLGWAIELLQAYFLVADDM--MDQSKTRRGQPCWYLV 117

Query: 111 YD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167
                 AI   + +L  A  I+   K   + +     +L L H +  Q  L GQ+LD   
Sbjct: 118 EGVNNIAIN-DSFMLEGAIYIL--LKKHFRQDPYYVDLLDLFHEVTFQTEL-GQLLDLIT 173

Query: 168 QDEFI------DETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGI 219
            DE I         +   I   KT     +   + A+       + + +++R     LG 
Sbjct: 174 ADEEIVDLDKFSLEKHSFIVIFKTAYYSFYLPVALAMYMSGINDEKDLKQVRDILIPLGE 233

Query: 220 IFQLADDLLDCEE 232
            FQ+ DD LDC  
Sbjct: 234 YFQIQDDYLDCFG 246


>gi|158286274|ref|XP_308653.4| AGAP007104-PA [Anopheles gambiae str. PEST]
 gi|157020390|gb|EAA04004.4| AGAP007104-PA [Anopheles gambiae str. PEST]
          Length = 443

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 19/242 (7%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            S+ +E       ++ DL    + + +       + A++Y +  GKK R         + 
Sbjct: 105 KSESREFMAVFPDVVRDLTAYASKYDKNVATKWFVKALQYNVPQGKKNRGLACVLAYRML 164

Query: 66  NVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
             +          A  +G AIE +H   LI DD+  MD    RRG+P  H   D   + +
Sbjct: 165 ARSEDLTPENIRRAQYLGWAIEMLHSMFLIMDDV--MDGSVTRRGQPCWHTLDDVKLSGV 222

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
               ++  A   +   K Q  +      +L L + +     + GQ LD++   +D T   
Sbjct: 223 NDAIMIEAAIAHLV--KIQYGNEPYYPRLLELFNEMKFITTI-GQSLDLRSAKLDVTDYS 279

Query: 179 M-----IQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           M     I   KT     +   + A+    +       + +     +G  +Q  DD  DC 
Sbjct: 280 MDLYKSIVFHKTAYYTFYLPVAMAMHLTGYTDPEMFRQAKTILLEIGQFYQTQDDFFDCF 339

Query: 232 ED 233
            D
Sbjct: 340 GD 341


>gi|326490760|dbj|BAJ90047.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531764|dbj|BAJ97886.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 352

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 89/247 (36%), Gaps = 35/247 (14%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-- 67
              ++  D + ++LL   A       +  +   + Y +LGGK  R   V +   L     
Sbjct: 16  AAFARIYDALKEELLRDPAFDYTESSHQWIDRMLDYNVLGGKCNRGLSVVDSYKLLKGVD 75

Query: 68  -----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGN 121
                    A  +G  IE +  + L+ DD+  MD+ + RRG+P           A+  G 
Sbjct: 76  ALTEEEMFLASTLGWCIEWLQAFFLVLDDI--MDDSHTRRGQPCWFRVPQVGFIAVNDGI 133

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---- 177
            L  +   ++   +   K       +L L + +       GQMLD+      E  +    
Sbjct: 134 LLRNHISRML---RLHFKKKPYYADLLDLFNEVE-FKTASGQMLDLITTHEGEKDLTKYN 189

Query: 178 ----FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQLADD 226
                 I + KT             +++       E L  +G  EN+    G  FQ+ DD
Sbjct: 190 IGVHRRIVQFKTAYYSFYLPVACALLLSG------ENLENYGAVENILVEMGTYFQVQDD 243

Query: 227 LLDCEED 233
            LDC  D
Sbjct: 244 YLDCYGD 250


>gi|15236002|ref|NP_193452.1| FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2);
           dimethylallyltranstransferase/ geranyltranstransferase
           [Arabidopsis thaliana]
 gi|13431525|sp|Q43315|FPPS2_ARATH RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase
           2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 2; AltName:
           Full=Dimethylallyltranstransferase 2; AltName:
           Full=Farnesyl diphosphate synthase 2; AltName:
           Full=Geranyltranstransferase 2
 gi|1146161|gb|AAB07247.1| farnesyl diphosphate synthase [Arabidopsis thaliana]
 gi|1146163|gb|AAB07248.1| farnesyl diphosphate synthase [Arabidopsis thaliana]
 gi|2245078|emb|CAB10500.1| dl4630c [Arabidopsis thaliana]
 gi|7268470|emb|CAB80990.1| AT4g17190 [Arabidopsis thaliana]
 gi|18176350|gb|AAL60028.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis
           thaliana]
 gi|21436457|gb|AAM51429.1| putative farnesyl-pyrophosphate synthetase FPS2 [Arabidopsis
           thaliana]
 gi|332658460|gb|AEE83860.1| farnesyl diphosphate synthase 2 [Arabidopsis thaliana]
          Length = 342

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 26/235 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR------- 74
           DLL   +     +    L   + Y + GGK  R   V +   L         +       
Sbjct: 18  DLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKLLKQGQDLTEKETFLSCA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MDN   RRG+P    +      AI  G  L  +   I+  
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRIL-- 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----FMIQK----MKT 185
            K   ++      ++ L + +  Q    GQM+D+   F  E  +      I +     KT
Sbjct: 134 -KKHFREMPYYVDLVDLFNEVEFQTAC-GQMIDLITTFDGEKDLSKYSLQIHRRIVEYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                        +MA  +      ++    ++GI FQ+ DD LDC  D   L K
Sbjct: 192 AYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFADPETLGK 246


>gi|309812764|ref|ZP_07706503.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
 gi|308433281|gb|EFP57174.1| polyprenyl synthetase [Dermacoccus sp. Ellin185]
          Length = 402

 Score =  101 bits (253), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 83/214 (38%), Gaps = 41/214 (19%)

Query: 48  LGGKKIRSFLV----TECASLFNVNHLTA-----LRVGAAIECIHCYSLIHDDLPSMDNG 98
            GGK +R  LV           N +   A     +RV AA E +H + L+ DD+  MD  
Sbjct: 99  AGGKLVRPRLVRLGYLAARECTNPDDDPATTDAVVRVAAAFELLHLFGLLQDDV--MDAS 156

Query: 99  YIRRGKPTVHIQY---------------DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             RRG PT H Q                 +  A++AG+     A  ++ +    + D   
Sbjct: 157 DTRRGTPTAHHQVRAAAAQPDGPDAARLGDSVAVLAGDLAFALANRLVRALPEHVAD--- 213

Query: 144 SQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMC-FACESGAIM 199
                    +  +  ++ GQ LD     +  +DE     +   K+GA       E GA++
Sbjct: 214 -------AWDAAVVELVTGQRLDLVFAAEARLDEVSTRRVAHAKSGAYTVQRPLEIGALL 266

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A  S      L  FG  LG  F LADD++    +
Sbjct: 267 AGESAP-PTWLSRFGAALGEAFALADDIIGLWGE 299


>gi|254581250|ref|XP_002496610.1| ZYRO0D04070p [Zygosaccharomyces rouxii]
 gi|238939502|emb|CAR27677.1| ZYRO0D04070p [Zygosaccharomyces rouxii]
          Length = 322

 Score =  101 bits (253), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 80/213 (37%), Gaps = 14/213 (6%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           + L++ +     +    ++    Y +   GK  RS L+     ++ +      ++   + 
Sbjct: 5   EKLVKQSPIWDDRDETAIVEPYDYIVSKPGKSFRSKLINVFNEIYQIPIEKTNQISTLVA 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   D+   RRG PT H  +     I A N +   A EI+ +      D
Sbjct: 65  ILHNASLLIDDIE--DSSATRRGIPTSHTLFGVPLTINAANYMYFKAMEILQTIS---GD 119

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI------DETQVFMIQKMKTGALMCFACE 194
           +      L +  N  +  +  GQ LDI           DE   + +   KTG L      
Sbjct: 120 DKILLHDLMVIFNQEMINLHRGQGLDIYWRDNLLQFIPDEATYYNMVMNKTGGLFRLTVR 179

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              ++          L      LGII+Q+ DD 
Sbjct: 180 IMELLTDV--ELPHSLVPLSNLLGIIYQIRDDY 210


>gi|212532131|ref|XP_002146222.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC
           18224]
 gi|210071586|gb|EEA25675.1| geranylgeranyl diphosphate synthase [Penicillium marneffei ATCC
           18224]
          Length = 396

 Score =  101 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IR  ++    +   V   +   + + +  +H  SL+ DD+   DN  +RRG P  H
Sbjct: 103 PGKDIRKQMIAAFNAWLKVPEQSLEIITSVVAMLHNASLLIDDVE--DNSVLRRGIPVAH 160

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A + +    +     I ++ +L+L    G+        L  +
Sbjct: 161 NIFGTAQTINSANYVYFLALQELRKLNSPAAIEIYTEELLNLHKGQGM-------DLFWR 213

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D      E +   +   KTG L   A +     + A ++    L      LG+IFQ+ DD
Sbjct: 214 DTLTCPTEEEYLEMVDNKTGGLFRLAVKLMQAESEAGKDCV-PLVNI---LGLIFQICDD 269

Query: 227 LLDC 230
            L+ 
Sbjct: 270 YLNL 273


>gi|68486364|ref|XP_712917.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
 gi|68486429|ref|XP_712885.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
 gi|46434304|gb|EAK93717.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
 gi|46434339|gb|EAK93751.1| likely farnesyl diphosphate synthetase [Candida albicans SC5314]
          Length = 351

 Score =  101 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 28/253 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           M+  L ++ +      + ++++L     S+ M  +  +  + ++ Y   GGK  R   V 
Sbjct: 1   MSDKLAAR-ERFLDVFEDLVEELKQILVSYNMPQEAIEWFVRSLNYNTPGGKLNRGLSVV 59

Query: 60  ECASLFNVNHLTALR---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           +  ++ N      L          +G AIE +  Y L+ DD+  MD    RRG+P  ++ 
Sbjct: 60  DTFAILNNTTSDKLNDTEYKKVALLGWAIELLQAYFLVADDM--MDQSKTRRGQPCWYLV 117

Query: 111 YD-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--I 167
                 AI   + +L  A  I+   K   + +     +L L H +  Q  L GQ+LD   
Sbjct: 118 EGVNNIAIN-DSFMLEGAIYIL--LKKHFRQDPYYVDLLDLFHEVTFQTEL-GQLLDLIT 173

Query: 168 QDEFI------DETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGI 219
            DE I         +   I   KT     +   + A+       + + +++R     LG 
Sbjct: 174 ADEEIVDLDKFSLEKHSFIVIFKTAYYSFYLPVALAMYMSGINDEKDLKQVRDILIPLGE 233

Query: 220 IFQLADDLLDCEE 232
            FQ+ DD LDC  
Sbjct: 234 YFQIQDDYLDCFG 246


>gi|156383848|ref|XP_001633044.1| predicted protein [Nematostella vectensis]
 gi|156220109|gb|EDO40981.1| predicted protein [Nematostella vectensis]
          Length = 355

 Score =  101 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 89/244 (36%), Gaps = 27/244 (11%)

Query: 11  ENSKRIDTI----LDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASLF 65
           ++ K  D      ++DL+ +  + +    +   L   + Y + GGK+ R   V       
Sbjct: 16  DDWKLFDDAFPGFVNDLVQEEENDLAIGDSIKWLREVLEYNVPGGKRNRGLSVIGSLRHL 75

Query: 66  -------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-VTAI 117
                  + +   AL +G  +E    + L+ DD+  MD    RRG+P  + Q +    AI
Sbjct: 76  IREEHFTDEHLRVALLLGWCVEWFQAFFLVADDI--MDQSMTRRGQPCWYRQPEVGNIAI 133

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ------DEF 171
             G  +    F ++   K  +K       ++ L H +     L GQ LD++       E 
Sbjct: 134 NDGIMIEQTVFRLL---KKHIKHQSYYVDVVELFHEVAYLTSL-GQSLDLRTKPGENFEG 189

Query: 172 IDETQVFMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLD 229
               +   I K KT              +A    +      +     +G  FQ+ DD +D
Sbjct: 190 FTLDRYRTIVKHKTAFYSFYLPVALAMFVAGIKDEASHANAKIILLEMGEFFQIQDDYID 249

Query: 230 CEED 233
              D
Sbjct: 250 VFGD 253


>gi|53733369|gb|AAH83515.1| Fdps protein [Danio rerio]
          Length = 359

 Score =  101 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 87/242 (35%), Gaps = 27/242 (11%)

Query: 14  KRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC------- 61
           +  D   + L+ +         + +   +RL   ++Y   GGK+ R   V          
Sbjct: 21  QLFDAEFEKLVCELTEQDFTDPVLSDALNRLREVLQYNAPGGKRNRGLSVIGSLRELVSP 80

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + L       AL VG  IE +  + L+ DD+  MD+   RRG+P  + +  E   + A N
Sbjct: 81  SELPTEEVHRALLVGWCIELLQAFFLVADDI--MDSSVTRRGQPCWYKK--EAIGLDAIN 136

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFID 173
                   I    +   +       +L L      Q  L GQ LD+              
Sbjct: 137 DAFLLEGSIYRLLRRHCRGQPYYVHLLELFTETSFQTEL-GQALDLMTAPPHKIDLNRFT 195

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER--LRCFGENLGIIFQLADDLLDCE 231
             +   I K KT     +   + A+     +NE E    +     +G  FQ+ DD LDC 
Sbjct: 196 MERYKAIVKYKTAFYSFYLPVAAAMYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDCF 255

Query: 232 ED 233
            D
Sbjct: 256 GD 257


>gi|70887563|ref|NP_001020642.1| farnesyl pyrophosphate synthase [Danio rerio]
 gi|66911345|gb|AAH97112.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase)
           [Danio rerio]
 gi|182891376|gb|AAI64398.1| Fdps protein [Danio rerio]
          Length = 356

 Score =  101 bits (252), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 55/242 (22%), Positives = 87/242 (35%), Gaps = 27/242 (11%)

Query: 14  KRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC------- 61
           +  D   + L+ +         + +   +RL   ++Y   GGK+ R   V          
Sbjct: 18  QLFDAEFEKLVCELTEQDFTDPVLSDALNRLREVLQYNAPGGKRNRGLSVIGSLRELVSP 77

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           + L       AL VG  IE +  + L+ DD+  MD+   RRG+P  + +  E   + A N
Sbjct: 78  SELPTEEVHRALLVGWCIELLQAFFLVADDI--MDSSVTRRGQPCWYKK--EAIGLDAIN 133

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD--------EFID 173
                   I    +   +       +L L      Q  L GQ LD+              
Sbjct: 134 DAFLLEGSIYRLLRRHCRGQPYYVHLLELFTETSFQTEL-GQALDLMTAPPHKIDLNRFT 192

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER--LRCFGENLGIIFQLADDLLDCE 231
             +   I K KT     +   + A+     +NE E    +     +G  FQ+ DD LDC 
Sbjct: 193 MERYKAIVKYKTAFYSFYLPVAAAMYMAGIENEIEHHNAKTILLEMGEFFQIQDDYLDCF 252

Query: 232 ED 233
            D
Sbjct: 253 GD 254


>gi|291449814|ref|ZP_06589204.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces
           albus J1074]
 gi|291352763|gb|EFE79665.1| LOW QUALITY PROTEIN: polyprenyl diphosphate synthase [Streptomyces
           albus J1074]
          Length = 209

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GGK +R  L    A     +  TAL    A+E +H +SL+HDD+  MD   +RR +P V 
Sbjct: 82  GGKGLRQALAVLSAEAVGASGTTALPAAVAVELVHTFSLLHDDI--MDGDPLRRRRPAVW 139

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             Y    A++AG+ L   A + ++    +        L  +LT       ++ GQ  D++
Sbjct: 140 RAYGVGPAVLAGDALHALAVQTLAEAPGERAPAAVRHLSRTLTA------LVRGQADDLR 193

Query: 169 DEFIDET 175
            E +  T
Sbjct: 194 FEELPWT 200


>gi|14625004|dbj|BAB61882.1| farnesyl diphosphate synthase [Rhodovulum strictum]
          Length = 138

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 7/126 (5%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH+++DE TA++ G+ L T AFE+++ P       +R  L+ +L    G+ GM
Sbjct: 12  LRRGLPTVHLKWDEGTALLVGDALQTLAFEMLADPACHPDPAVRIDLVAALARASGIDGM 71

Query: 160 LGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           + GQ  DI  E     +   ++  +Q  KTGAL+ ++ E+GA +  A       L  +  
Sbjct: 72  VLGQAQDIAAETAGRALSLAEITELQANKTGALIRWSAEAGARLGGAD---IAPLSAYAT 128

Query: 216 NLGIIF 221
            LG+ F
Sbjct: 129 ALGLAF 134


>gi|299115584|emb|CBN75787.1| Farnesyl pyrophosphate synthase [Ectocarpus siliculosus]
          Length = 499

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 81/234 (34%), Gaps = 21/234 (8%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-- 74
           ++++L+   A + +      D +   + Y   GGK  R   V +    F   +   LR  
Sbjct: 167 LVEELVADVADNYEGIPAQLDWIQENLEYNTKGGKMNRGMGVVDVLRAFAEANGRELRHE 226

Query: 75  -------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLTY 126
                  +G  +E +  + L+ DD+  MD    RRG+P  +     +  AI     L  +
Sbjct: 227 EVCRGSILGWCVEWLQAFFLVADDV--MDRSLTRRGQPCWYKVPKVQEIAINDSFILEAH 284

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ-----VFMIQ 181
            F+++          ++   +          G L        D   D T+       MI 
Sbjct: 285 VFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPSDLTRFTPVRYRMIV 344

Query: 182 KMKTGA-LMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + KT        C  G I A           R     +G  FQ+ DD LDC  D
Sbjct: 345 RYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGD 398


>gi|316972597|gb|EFV56270.1| octaprenyl pyrophosphate synthase / phytoene synthase [Trichinella
           spiralis]
          Length = 272

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 8/160 (5%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
               ++    E IH  SL+H     +D+   RR  PTV+  +   TA   G+ +L  A  
Sbjct: 85  DAQYKIAMIAEMIHTASLVH--DDVVDDSDRRRNIPTVNATHGYKTATFFGDIILAKATI 142

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           +++S       +I S+++  L     +      QM    DE    ++       KTG+L 
Sbjct: 143 LLTSINNAEVISIVSKILDDLVKGELI------QMESGSDESRLFSEYLTKCYKKTGSLF 196

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             + ++ A++A+ S+   + +  FG N G++FQL DDLLD
Sbjct: 197 SNSLKAAAVLANCSELCVKNVYQFGRNFGLMFQLVDDLLD 236


>gi|297242529|gb|ADI24929.1| VrtD [Penicillium aethiopicum]
          Length = 349

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 91/258 (35%), Gaps = 27/258 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDL--LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV 58
           M     + L+E       ++ DL  L      +     DR  S + +  LGGK  R   V
Sbjct: 1   MATSTTTSLKEFLSVFPQLVADLRALCLEEYQLPACVWDRFESTLNHNTLGGKCNRGLSV 60

Query: 59  TECASLFN-------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            +   L           +  A  +G  +E +    L+ DD+  MD    RRGKP+ +   
Sbjct: 61  IDSVRLLRDGLELSPAEYFDAAVLGWLVELLQATMLVLDDI--MDGSPTRRGKPSWYRVP 118

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI--QD 169
               A +    +L  A  ++   K           ++ L H   LQ  L GQ  D+   +
Sbjct: 119 GVGMAAVNDATMLESAIYML--LKKYFAGRAIYLPVVDLFHETALQIEL-GQAFDMLIAN 175

Query: 170 EFIDE------TQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIF 221
           E   +           I   KT     +   + A+ A   A+       R     +G  F
Sbjct: 176 EGTPDLTTFVPATYSQIVTYKTAFYSFYLPVALALHAVDAATPTNLAAARAILVPMGEYF 235

Query: 222 QLADDLLDCEED---LPK 236
           Q+ DD LDC  D   L K
Sbjct: 236 QVQDDYLDCFADPTVLGK 253


>gi|326490229|dbj|BAJ84778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 355

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 85/251 (33%), Gaps = 32/251 (12%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           G   ++  E   R+    +++L   A     +    +   + Y +LGGK  R   V +  
Sbjct: 15  GDSKAEFAEIYSRLK---EEMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVIDSY 71

Query: 63  SLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
                           A  +G  IE +  Y L+ DD+  MDN   RRG+P          
Sbjct: 72  KTLKGVDVLSKEETFLACTLGWCIEWLQAYFLVLDDI--MDNSQTRRGQPCWFRVPQVGL 129

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A+  G  L  +   I+          +    + +        G L   +   + E  D 
Sbjct: 130 IAVNDGIILRNHISRILQRHFRGKPYYVDLIDLFNEVEFKTASGQLLDLITTHEGEK-DL 188

Query: 175 TQV-----FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQ 222
           T+        I + KT             +++       E L  FG  +N+    G  FQ
Sbjct: 189 TKYNLNVHRRIVQYKTAYYSFYLPVACALLLSG------ENLDNFGDVKNILVEMGTYFQ 242

Query: 223 LADDLLDCEED 233
           + DD LDC  D
Sbjct: 243 VQDDYLDCFGD 253


>gi|242015532|ref|XP_002428407.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus
           corporis]
 gi|212513019|gb|EEB15669.1| farnesyl-pyrophosphate synthetase, putative [Pediculus humanus
           corporis]
          Length = 403

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 18/205 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++Y + GGKK R   +     L   N        A  +G  IE +    LI DD+  MDN
Sbjct: 101 LQYNVPGGKKNRGLALVVTYKLLKKNVSKEEIYLAQIMGWCIEILQAKLLIADDI--MDN 158

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG+P  ++ +D  T   A N  L     +    K   KD      +L L H++ L+
Sbjct: 159 SLTRRGRPCWYLTHDLGT--KALNDALLLGGSLFQVLKMYFKDKSYYINILELFHDVMLK 216

Query: 158 GMLGGQMLDIQDEFIDET-------QVFMIQKMKT-GALMCFACESGAIMAHASQNEKER 209
             LG  +       I +        +  +I K KT          +   MA    +E  R
Sbjct: 217 TFLGQHLDTHTSLDISKDLNKFTMARYNLICKYKTSYYSFVLPIAAAMFMAGIDDHELHR 276

Query: 210 -LRCFGENLGIIFQLADDLLDCEED 233
             +     +G  FQ+ DD LDC  D
Sbjct: 277 QAKTILLEMGHFFQVQDDYLDCFGD 301


>gi|70982877|ref|XP_746966.1| geranylgeranyl pyrophosphate synthetase AtmG [Aspergillus fumigatus
           Af293]
 gi|66844591|gb|EAL84928.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
           fumigatus Af293]
 gi|159123850|gb|EDP48969.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Aspergillus
           fumigatus A1163]
          Length = 357

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 87/236 (36%), Gaps = 34/236 (14%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTE 60
            G  PS LQE  K  D                  +  + + + Y     GK IR  L++ 
Sbjct: 52  TGSSPSDLQEQRKLAD------------------DKIIWAPLDYLCSFPGKDIRGKLISA 93

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                 +       +   +  +H  SL+ DD+   D+  +RRG P  H  +     I + 
Sbjct: 94  FNQWLQIPEDKLDVIKRVVGLLHSASLLIDDIQ--DSSKLRRGFPVAHSIFGIAQTINSA 151

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVF 178
           N    +A + +          I ++ ML L    GL        L  +D      E +  
Sbjct: 152 NFAYFWAQQELKKLGKPEAMVIFTEEMLRLHRGQGL-------DLYWRDSLTCPTEEEYL 204

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            +   KTG L   A +   + +H +++    +      LGIIFQ+ DD  + + DL
Sbjct: 205 EMVANKTGGLFRLAIKLMQMESHNTEDCVPLVD----LLGIIFQIRDDYQNLQSDL 256


>gi|171691761|ref|XP_001910805.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945829|emb|CAP72629.1| unnamed protein product [Podospora anserina S mat+]
          Length = 467

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 18/211 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +D  L T   + T+  D++L+A    L G  GK  RS LV    +   V   +   +   
Sbjct: 163 EDFFLNT-KRLWTEQKDKVLTAPYDYLNGHPGKDFRSALVNAFDAFLEVPKESKETITKV 221

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +  +H  SL+ DD+   DN  +RRG P  H  Y     I + N +   A + +   K   
Sbjct: 222 VSMLHTASLLVDDVE--DNSLLRRGLPVAHTIYGIPQTINSSNYIYFVALQELQKLKNPK 279

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESG 196
             NI ++ +L+L    G+        L  +D      E +   +   KTG L     +  
Sbjct: 280 VVNIFAEELLNLHRGQGM-------DLYWRDTLTCPTEDEYLEMVGNKTGGLFRLGIKLM 332

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              +  S  +   L      +G+IFQ+ADD 
Sbjct: 333 QAESR-SLTDCIPLVNV---IGLIFQIADDY 359


>gi|296203641|ref|XP_002748996.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
           jacchus]
          Length = 408

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 86/255 (33%), Gaps = 26/255 (10%)

Query: 1   MNGGLPSKL--QENSKRIDTILDDLLLQTASHMQTQHND------RLLSAIRYALLGGKK 52
           MNG   S +  QE    +    +  +++  +  + +H +      RL   + Y  +GGK 
Sbjct: 56  MNGDQKSDVYAQEKQDFVHHFSE--IVRVLTEDEMEHPETGDAIARLKEVLEYNAIGGKY 113

Query: 53  IRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
            R  +V                    AL VG  +E +  + L+ DD+  MD+   RRG+ 
Sbjct: 114 HRGLMVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDI--MDSSLTRRGQI 171

Query: 106 TVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
             + +      AI     L    + ++     +    +    +   +      G     +
Sbjct: 172 CWYQKPGVGLDAINDAVLLEACVYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTPDFI 231

Query: 165 LDIQD----EFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLG 218
              QD    +   E +   I K KT          +   MA    + E          +G
Sbjct: 232 TAPQDNVDLDRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANANEILLEMG 291

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DD LD   D
Sbjct: 292 EFFQIQDDYLDLFGD 306


>gi|14488053|gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x piperita]
          Length = 349

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 85/236 (36%), Gaps = 23/236 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHL 70
           T+  +LL   A          +   + Y + GGK  R   V +   L        +    
Sbjct: 21  TLKSELLNDPAFEWTDGSRQWVERMLDYNVPGGKLNRGLSVIDSYQLLKEGKDLTDDEVF 80

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  IE +  Y L+ DD+  MDN + RRG+P           AI  G  L  +   
Sbjct: 81  LASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFKVPKVGMIAINDGIILRNHIPR 138

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQ 181
           I+   K   +       +L L + +       GQM+D+      E  +          I 
Sbjct: 139 IL---KKHFRSKPYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEKDLSKYSLPLHRRIV 194

Query: 182 KMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + KT             +MA  +      ++    ++GI FQ+ DD LDC  +  K
Sbjct: 195 QYKTAYYSFYLPVACALLMAGENLENHPTVKDVLIDMGIYFQVQDDYLDCFGEPEK 250


>gi|186704302|dbj|BAG30960.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali]
          Length = 424

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 83/215 (38%), Gaps = 18/215 (8%)

Query: 24  LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           +         +    +L+   Y A   GK+ R+ ++    + F V   +   +   +  +
Sbjct: 119 VADLNFSWAEEEEKVVLAPYDYVASNSGKEFRTLILNAFNAWFRVPPESLTIICDVVRML 178

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-N 141
           H  SL+ DD+   DN  +RRG+P  H  Y     I  GN +   A + ++  +       
Sbjct: 179 HTSSLLIDDIQ--DNSLLRRGRPVAHSIYGVAQTINTGNYVYFLAAKELNKLRNAASALE 236

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIM 199
           + +  ML+L           GQ L  +D  +   E +   +   KTG L   A +     
Sbjct: 237 VFTAEMLNLHRG-------QGQELYWRDTLKCPTEDEYLKMVSNKTGGLFRMAVKLMQAE 289

Query: 200 --AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A       ++L      LG+++Q+ADD  +   
Sbjct: 290 SPAGPMAPVCDKLVQL---LGLVYQIADDYKNLTA 321


>gi|313222092|emb|CBY39100.1| unnamed protein product [Oikopleura dioica]
          Length = 349

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 73/207 (35%), Gaps = 14/207 (6%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           + +L  ++ Y L GGK  R  +        A    V+   AL +G A+EC+    L+ DD
Sbjct: 44  SKQLEKSLEYNLSGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDD 103

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL-LTYAFEIISSPKTQLKDNIRSQLMLSL 150
           +  MD+   RRG+   +   D    +   + L +     I+           +   +   
Sbjct: 104 I--MDSSVTRRGRACWYKNQDVGL-MAINDALSIEMCVYILLRSLPDYVPVDKLVELFEW 160

Query: 151 THNIGLQG----MLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQN 205
              I   G    M   +   +      E     I K KT          SG + A    N
Sbjct: 161 ATIITEMGQTLDMQNSECAHVDLNHFTEDTYSAIVKYKTSVYSFYLPIASGLVAAGQDSN 220

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
              +L+     +G  FQ  DD +DC  
Sbjct: 221 -CSQLKEITLQMGHYFQAQDDFIDCFG 246


>gi|209570224|emb|CAP74388.1| geranylgeranyl diphosphate synthase [Gibberella intermedia]
          Length = 393

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/214 (24%), Positives = 80/214 (37%), Gaps = 18/214 (8%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           + +     ++Q      S   Y L L  K IR   +       +V    A  +   I+ +
Sbjct: 81  ISELNHRWKSQRLKVADSPYNYILTLPSKGIRGAFIDSLNVWLDVPEDKAQVIKDVIDML 140

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SLI DD    D   +RRGKP+ H  +    AI     ++  A E I          I
Sbjct: 141 HNSSLIIDD--FQDGSPLRRGKPSTHTVFGPAQAINTATYIIVKAIERIQE--------I 190

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAI 198
            S   L+         +  GQ +D+            +  ++   KTGAL   + E  A+
Sbjct: 191 VSHDALADITGTITT-IFQGQAMDLWWTANTILQSIQEYLLMVNDKTGALFRLSLELLAL 249

Query: 199 MAHA--SQNEKERLRCFGENLGIIFQLADDLLDC 230
            + A  S +  E L      LG  FQ+ DD ++ 
Sbjct: 250 NSEAPISDSTLESLSSVVSLLGQYFQIRDDYMNL 283


>gi|62288319|gb|AAX78435.1| farnesyl diphosphate synthase [Dendroctonus jeffreyi]
          Length = 429

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 81/246 (32%), Gaps = 27/246 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-------YALLGGKKIRSFLVTECA 62
           +E S+    +  DL+ +     +   +  L   +R       Y    GKK R  ++    
Sbjct: 87  KEQSRDFMALFPDLVRELT---EVGKSQELHDVMRRFARVLQYNTPTGKKNRGLIILSTY 143

Query: 63  SLFNVNHLTA---LRVGAAI----ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            +           +R+ + +    E +H Y LI DD+  MD    RRG      Q     
Sbjct: 144 RMLEDPEKLTPENIRLASILGWCAEMVHAYVLILDDI--MDGSETRRGALCWFRQSGIGL 201

Query: 116 -----AIIAGNGLLTYAFEIISSPKTQLK-DNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                A++  N +       +      +    +  +  L  T    L  M        + 
Sbjct: 202 TAVNDAVMIENAVYLLIKRHLKDHPMYVPLMELFHEGNLKTTLGQSLDAMCLDTNGKPKL 261

Query: 170 EFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDL 227
           +    ++   I K KT              +A  S  E+ R  +     +G  FQ+ DD 
Sbjct: 262 DMFTMSRYTSIVKYKTAFYSFQMPVAIAMYLAGMSDEEQHRQAKTILMEMGQFFQIQDDF 321

Query: 228 LDCEED 233
           LDC  D
Sbjct: 322 LDCFGD 327


>gi|163801010|ref|ZP_02194910.1| polyprenyl synthetase family protein [Vibrio sp. AND4]
 gi|159175359|gb|EDP60156.1| polyprenyl synthetase family protein [Vibrio sp. AND4]
          Length = 242

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 9/180 (5%)

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
             E +    +++  A+R+   IE +H  SLIHDD+   D   +RRG   V  ++    AI
Sbjct: 4   CLEISLSLGIHYDDAVRLAVTIELLHNASLIHDDIQ--DKDSVRRGAMAVWAKFGSSIAI 61

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQ 176
             G+ L+  AF +++          +S   L       +   + GQ+ D    E I   +
Sbjct: 62  CTGDYLIAKAFGVLAEVSCS-----KSVPKLLEATQKAVTTTIEGQIADLTAKEDIHRDE 116

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
              I   K G L+  + E   I+     ++ +  R    NL + +Q+ DD+ D  +D  +
Sbjct: 117 YEDIAAKKAGPLLALSLELPLIVTE-KHSDIQTARHAAFNLAVAYQILDDINDSAKDFKR 175


>gi|169763336|ref|XP_001727568.1| farnesyltranstransferase [Aspergillus oryzae RIB40]
 gi|238489227|ref|XP_002375851.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357]
 gi|83770596|dbj|BAE60729.1| unnamed protein product [Aspergillus oryzae]
 gi|220698239|gb|EED54579.1| geranylgeranyl diphosphate synthase [Aspergillus flavus NRRL3357]
          Length = 389

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 76/207 (36%), Gaps = 16/207 (7%)

Query: 27  TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                  ++   +L    Y L   GK IR  L+        V   +   +   +  +H  
Sbjct: 73  KDGQWSPENEVIVLGPYDYMLQHPGKDIRRQLINAFNEWLKVPAESLAIITKVVTMLHTA 132

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   D   +RRG P  H  Y     I + N +   A + +         +I  Q
Sbjct: 133 SLLIDDVE--DCSILRRGAPVAHNIYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQ 190

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +L+L    G+        L  +D      E +   +   KTG L   A +     + A+
Sbjct: 191 ELLNLHRGQGM-------DLFWRDTLTCPSEEEYLEMVGNKTGGLFRLAIKLMQAES-AT 242

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
             +   L      LG+IFQ+ DD L+ 
Sbjct: 243 GKDCVSLVNV---LGLIFQICDDYLNL 266


>gi|313237864|emb|CBY12994.1| unnamed protein product [Oikopleura dioica]
          Length = 349

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 73/207 (35%), Gaps = 14/207 (6%)

Query: 36  NDRLLSAIRYALLGGKKIRSFLV----TECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           + +L  ++ Y L GGK  R  +        A    V+   AL +G A+EC+    L+ DD
Sbjct: 44  SKQLEKSLEYNLSGGKMSRGMVASQVFLLSAKDSRVSEEDALVLGWAMECLQTCFLVVDD 103

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL-LTYAFEIISSPKTQLKDNIRSQLMLSL 150
           +  MD+   RRG+   +   D    +   + L +     I+           +   +   
Sbjct: 104 I--MDSSVTRRGRACWYKNQDVGL-MAINDALSIEMCVYILLRSLPDYVPVDKLVELFEW 160

Query: 151 THNIGLQG----MLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQN 205
              I   G    M   +   +      E     I K KT          SG + A    N
Sbjct: 161 ATIITEMGQTLDMQNSECAHVDLSHFTEDTYSAIVKYKTSVYSFYLPIASGLVAAGQDSN 220

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
              +L+     +G  FQ  DD +DC  
Sbjct: 221 -CSQLKEITLQMGHYFQAQDDFIDCFG 246


>gi|190149251|gb|AAY33490.3| putative mitochondrial isoprenyl diphosphate synthase precursor
           [Acyrthosiphon pisum]
          Length = 394

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 79  PDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L  ++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 THILELFFDVTMK-TAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|297591959|ref|NP_001172060.1| farnesyl pyrophosphate synthase [Sus scrofa]
 gi|262072800|dbj|BAI47708.1| farnesyl diphosphate synthase [Sus scrofa]
          Length = 421

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 86/253 (33%), Gaps = 22/253 (8%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  +E     +    I+  L  +   H +      RL   + Y ++GGK  R
Sbjct: 69  MNGDQKLDAYARERQDFIQHFSQIVKVLTEEDIGHPEIGDAVARLKEVLEYNVVGGKYNR 128

Query: 55  SFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V                    AL VG  IE +  + L+ DD+   D+   RRG+   
Sbjct: 129 GITVLVVFRELVEPRKQDADSLQRALTVGWCIELLQAFFLVADDIE--DSSLTRRGQTCW 186

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGG 162
           + +      AI     L    + ++      +    + I   L  S    IG    ++ G
Sbjct: 187 YRKPGIGLDAINDAFLLEACIYRLLKFYCREQPYYLNLIELFLQTSYNTEIGQTLDLIAG 246

Query: 163 QMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGII 220
              ++      E +   I K KT          +   MA    + E    +     +G  
Sbjct: 247 PQGNVDLSRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILMEMGEF 306

Query: 221 FQLADDLLDCEED 233
           FQ+ DD LD   D
Sbjct: 307 FQIQDDYLDLFGD 319


>gi|320583113|gb|EFW97329.1| Farnesyl pyrophosphate synthase [Pichia angusta DL-1]
          Length = 351

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 88/244 (36%), Gaps = 31/244 (12%)

Query: 18  TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV--------- 67
            ++ DL   T  + M     +     + Y   GGK  R   V +  +L            
Sbjct: 16  ELVSDLETVTKEYGMPQDAIEWFKRNLNYNTPGGKLNRGLSVVDTYALLKGYKSFDDFEP 75

Query: 68  -NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGNGLLT 125
             +     +G A+E +  Y L+ DD+  MD    RRG+P  +        AI   + +L 
Sbjct: 76  EEYKKTAILGWAVELLQAYFLVADDM--MDKSITRRGQPCWYRVDGVNEIAIN-DSFMLE 132

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF------- 178
            A  ++   K   + +     +L L H +  Q  L GQ+LD+     D   +        
Sbjct: 133 AAIYVL--LKKYFRKDSYYVDLLELFHEVTFQTEL-GQLLDLLTAPEDHVDLSKFSLSKH 189

Query: 179 -MIQKMKTGAL-MCFACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEE--- 232
             I   KT              MA  S   + ++ +     LG  FQ+ DD LDC     
Sbjct: 190 SFIVTFKTAYYSFYLPVALAMYMAGVSDEKDLKQAQDVLIPLGEYFQIQDDYLDCFGKPE 249

Query: 233 DLPK 236
           D+ K
Sbjct: 250 DIGK 253


>gi|63103173|gb|AAY33492.1| bifunctional GPPS/FPPS isoprenyl diphosphate synthase precursor
           [Myzus persicae]
          Length = 362

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 47  PDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAY 106

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 107 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYY 161

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L  ++ ++    GQ LD+           E         I K KT     F    
Sbjct: 162 THILELFFDVTMK-TAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVC 220

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 221 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 260


>gi|282935089|gb|ACT79809.3| mitochondrial farnesyl diphosphate synthase [Aphis gossypii]
          Length = 394

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 79  PDVTKWLAKVLQYNVPGGKKNRGLALVLSFKMLSSPSDQTDENLRLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L +++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 VHILELFYDVTMK-TSMGQCLDMLTANSFKTKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|198436974|ref|XP_002128313.1| PREDICTED: similar to farnesyl pyrophosphate synthetase [Ciona
           intestinalis]
          Length = 348

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 83/245 (33%), Gaps = 27/245 (11%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHND------RLLSAIRYALLGGKKIRSFLVTECAS- 63
           E     D    +++ + +       N+      R+   + Y    GK+ R   V      
Sbjct: 6   ELWDLFDKHFQEIVRELSISPVNGGNEICWSFERIKDLLEYNAPHGKRTRGLTVVAAFKT 65

Query: 64  -LFNVNHLTALRVG----AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
              +      +++      A+E +    L+ DDL  MD    RRG+   ++  +    A+
Sbjct: 66  IAGDGISEDEMKLALTMGWAVEILQASFLVADDL--MDQSKTRRGQACWYLNPNVGYQAV 123

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF------ 171
             G  L T  F +I   +   K       +  L H + L  ++G  +     E       
Sbjct: 124 NDGMILETCVFTLI---RQHCKGKAFYADIFDLFHKVILNTLMGQSLDMEASEQPTVDFT 180

Query: 172 -IDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKE-RLRCFGENLGIIFQLADDLL 228
              ET+   I K KT              MA  +  +           +G +FQ+ DD L
Sbjct: 181 LFTETKHAAIIKYKTAFYSFYLPVAIAFYMAGINDEQCHTAACDILTKIGCLFQIQDDYL 240

Query: 229 DCEED 233
           DC  D
Sbjct: 241 DCYGD 245


>gi|63103171|gb|AAY33491.1| bifunctional putative mitochondrial GPPS/FPPS isorpenyl diphosphate
           synthase precursor [Myzus persicae]
          Length = 394

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 79  PDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L  ++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 THILELFFDVTMK-TAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|296424384|ref|XP_002841728.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637976|emb|CAZ85919.1| unnamed protein product [Tuber melanosporum]
          Length = 343

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 79/206 (38%), Gaps = 16/206 (7%)

Query: 30  HMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
               +  + LL    Y +   GK IR   +T   S   V  ++   +   +  +H  SL+
Sbjct: 51  QWSEEKENILLGPYNYLVSHPGKDIRQQSITAFNSWLQVPEVSLQIITKVVAMLHNASLL 110

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
            DD+   D   +RRG P  H  +     I + N +   A + +      L   I ++ +L
Sbjct: 111 VDDVE--DRSNLRRGFPVAHSIFGVAQTINSANYVYFQALQELLKLNNPLVLRIYTEELL 168

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +L    G+        L  +D      E     +   KTG L   A +     + AS  +
Sbjct: 169 NLHRGQGM-------DLFWRDTLTTPTEDDYLEMVSNKTGGLFRLAVKLMQAES-ASDKD 220

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
              L      +G++FQ+ DD L+ + 
Sbjct: 221 YVPLVNI---IGLLFQILDDYLNLQS 243


>gi|63022077|gb|AAY26574.1| farnesyl diphosphate synthase-like protein [Choristoneura
           fumiferana]
          Length = 397

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 89/251 (35%), Gaps = 28/251 (11%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
            S  Q   +  + +L  +L    ++ +     +  + L   + Y L GGKK R       
Sbjct: 52  ASPTQTKKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFA 111

Query: 62  ASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             +              A  +G  +E +  + ++ DD+  MD    RRG P  +   +  
Sbjct: 112 YEMLEKPENITEETIYLAKTLGWCVEILQGFLVMLDDI--MDGSTTRRGVPCWYQLPEVG 169

Query: 115 -TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI- 172
             A+   + + +  F ++   +    D      ++ L +   +   + GQ LD+  E   
Sbjct: 170 LAAVNDSSLMFSSIFYVL---RAHFADKKIYTNLVELFNESLMHTSI-GQHLDVTMERRQ 225

Query: 173 -------DETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQL 223
                     +   I K KT           G ++A+ S     ++       +G  FQ+
Sbjct: 226 KSDYSLFTIERYNAIVKYKTAYYTYQLPVCLGMLLANISDPVLHQKAEDMCLEIGKFFQI 285

Query: 224 ADDLLDCEEDL 234
            DD +DC  D 
Sbjct: 286 QDDYIDCYGDE 296


>gi|183984773|ref|YP_001853064.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum
           M]
 gi|183178099|gb|ACC43209.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium marinum
           M]
          Length = 384

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 26/203 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH- 108
           GK +RS  +          +  AL   A++E +H ++L+ DD+  MD    RRG P VH 
Sbjct: 81  GKCLRSTFMYLGWLCGAGPNNAALSAAASLELLHAFALLQDDV--MDQSPQRRGSPAVHV 138

Query: 109 ---------------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
                           ++ E  A++ G+  L +A +++     +   + R + +      
Sbjct: 139 QLARCHQRRGLSGAAARFGESAAVLLGDICLVWAEQMLRESGVE---DRRLRQVWPRYDA 195

Query: 154 IGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER 209
           + +  +  GQ+ D+ ++         V  + + K+G   +    E GA MA   +   E+
Sbjct: 196 MRI-ELAVGQLCDLSNDIRNLPTLDAVLDVARRKSGNYTVRRPLEMGAAMADCDERTLEQ 254

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
           L  +G+ +G  FQL DD+L    
Sbjct: 255 LARYGDAVGEAFQLRDDMLGVFG 277


>gi|118088191|ref|XP_424685.2| PREDICTED: similar to geranylgeranyl diphosphate synthase [Gallus
           gallus]
          Length = 420

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 15/180 (8%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK++R+ L        NV       +    E +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 144 GKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNASLLVDDIE--DNSKLRRGFPVAHS 201

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y   + I   N +     E + +        + ++ +L L    GL        +  +D
Sbjct: 202 IYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLLELHKGQGL-------DIYWRD 254

Query: 170 EFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +    E +   +   KTG L   A     + ++  ++ K  L      LG+ FQ+ DD 
Sbjct: 255 TYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNT----LGLFFQIRDDY 310


>gi|15238801|ref|NP_199588.1| FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1);
           dimethylallyltranstransferase/ geranyltranstransferase
           [Arabidopsis thaliana]
 gi|21431776|sp|Q09152|FPPS1_ARATH RecName: Full=Farnesyl pyrophosphate synthase 1, mitochondrial;
           Short=FPP synthase 1; Short=FPS 1; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase 1; AltName:
           Full=Dimethylallyltranstransferase 1; AltName:
           Full=Farnesyl diphosphate synthase 1; AltName:
           Full=Geranyltranstransferase 1; Flags: Precursor
 gi|13878123|gb|AAK44139.1|AF370324_1 putative farnesyl diphosphate synthase precursor [Arabidopsis
           thaliana]
 gi|1872500|gb|AAB49290.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana]
 gi|7275351|gb|AAF44787.1| farnesyl diphosphate synthase long form [Arabidopsis thaliana]
 gi|10177913|dbj|BAB11324.1| farnesyl diphosphate synthase precursor [Arabidopsis thaliana]
 gi|17104795|gb|AAL34286.1| putative farnesyl diphosphate synthase precursor [Arabidopsis
           thaliana]
 gi|332008187|gb|AED95570.1| farnesyl diphosphate synthase 1 [Arabidopsis thaliana]
          Length = 384

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 96/256 (37%), Gaps = 27/256 (10%)

Query: 2   NGGLPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           +  + + L+     + ++L  DLL   +     +    +   + Y + GGK  R   V +
Sbjct: 39  SSSMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVD 98

Query: 61  CASLFNVNHLTAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
              L    +            +G  IE +  Y L+ DD+  MDN   RRG+P        
Sbjct: 99  SFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPQV 156

Query: 114 V-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              AI  G  L  +   I+   K   +D      ++ L + + LQ    GQM+D+   F 
Sbjct: 157 GMVAINDGILLRNHIHRIL---KKHFRDKPYYVDLVDLFNEVELQTAC-GQMIDLITTFE 212

Query: 173 DETQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            E  +          I + KT             +MA  +      ++    ++GI FQ+
Sbjct: 213 GEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQV 272

Query: 224 ADDLLDCEED---LPK 236
            DD LDC  D   L K
Sbjct: 273 QDDYLDCFADPETLGK 288


>gi|224808192|gb|ACN63187.1| farnesyl diphosphate synthase [Euphorbia pekinensis]
          Length = 342

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 89/250 (35%), Gaps = 25/250 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L S   +   ++ T   +LL  TA          +   + Y + GGK  R   V +  
Sbjct: 2   ADLKSTFLDVYSQLKT---ELLNDTAFEWSPDSRQWVERMLDYNVPGGKLNRGLSVIDSY 58

Query: 63  SLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L              A  +G  IE +  Y L+ DD+  MD  + RRG+P          
Sbjct: 59  KLLKQGEELTEEEIFLASALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRLPKVGM 116

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
            I A +G++     I    K   +       +L L + +       GQM+D+      E 
Sbjct: 117 -IAANDGIMLRN-HIPRILKKHFRGKPYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEK 173

Query: 176 QV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            +          I + KT             +MA  S +    ++     +GI FQ+ DD
Sbjct: 174 DLNKYTLSLHRRIVQYKTAYYSFYLPVACALLMAGESLDNHIDVQNILVQMGIYFQVQDD 233

Query: 227 LLDCEEDLPK 236
            LDC  D PK
Sbjct: 234 YLDCYGD-PK 242


>gi|322693895|gb|EFY85740.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium acridum
           CQMa 102]
          Length = 331

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 12/205 (5%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S +   + + + +   Y L L GK +RS +++       +       +   I  +H  SL
Sbjct: 30  SSIAAGYEEIIRAPFDYLLNLPGKDVRSKMISAFNEWLCIPVDKLEVIKRIIMLLHNASL 89

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+   D+  +RRG P  H  +     I A N     A + +          I ++ +
Sbjct: 90  LIDDIQ--DSSKLRRGLPVSHHIFGVPQTINAANYAYFLAQQELPKLGDPKAFEIYTEEL 147

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           LSL    G+             +   E + F +   KTG L   A     + +  + +  
Sbjct: 148 LSLHRGQGMDI-----YWREASKCPTEEEYFSMVSHKTGGLFRLAIRLMQLASDKNCDFV 202

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
             +      LG+IFQ+ DD L+ + 
Sbjct: 203 PLVNV----LGVIFQIRDDYLNLQS 223


>gi|162538561|gb|ABY19312.1| farnesyl diphosphate synthase 1 [Myzus persicae]
          Length = 394

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 79  PDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L  ++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 THILELFFDVTMK-TAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|296205499|ref|XP_002749779.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
           jacchus]
          Length = 406

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 86/257 (33%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +T     RL   + Y  +GGK  R
Sbjct: 54  MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 113

Query: 55  SFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V                    AL VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 114 GLTVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDI--MDSSLTRRGQICW 171

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG---- 162
           + +      AI     L    + ++   K   ++      ++ L      Q  +G     
Sbjct: 172 YQKPGVGLDAINDAVLLEACVYRLL---KLYCREQPYYLNLIELFLQSSYQTEIGQTLDL 228

Query: 163 ----QMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
               Q     D F  E +   I K KT          +   MA    + E    +     
Sbjct: 229 ITAPQDNVDLDRF-TEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLE 287

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 288 MGEFFQIQDDYLDLFGD 304


>gi|281211687|gb|EFA85849.1| hypothetical protein PPL_01081 [Polysphondylium pallidum PN500]
          Length = 1488

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 84/242 (34%), Gaps = 30/242 (12%)

Query: 18   TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNHL 70
             IL DL        Q Q   RL+ +   ++ GGK  R         L+ E   L      
Sbjct: 1155 EILKDLPSMDIPAQQQQWISRLIDS---SVAGGKMNRGLTVVHSLQLLVEGRQLTRSEVF 1211

Query: 71   TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD----EVTAIIAGNGLLTY 126
             A  +G  +E +  + L+ DD+  MD    RRG+P  +   +    E  A   G+  +  
Sbjct: 1212 QANVLGWCVEWLQAFFLVADDI--MDQSITRRGQPCWYRTRNMLSSEPNA-TVGSIAIND 1268

Query: 127  AFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGG------QMLDIQDEFIDETQ 176
            AF + S      K   ++      +L L H    Q  LG       Q             
Sbjct: 1269 AFILESCIYILVKKYFRNESYYADLLDLFHETSYQTELGQLLDLTTQPNRGDFSMYSLDT 1328

Query: 177  VFMIQKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEEDL 234
               I K KT             +MA  +     +  +     +G  FQ+ DD LDC  D 
Sbjct: 1329 YRRIVKYKTAYYSFYLPVALAMLMAGITSKPAFDTAKDILLPMGEYFQVQDDYLDCYGD- 1387

Query: 235  PK 236
            PK
Sbjct: 1388 PK 1389


>gi|319949998|ref|ZP_08023982.1| geranylgeranyl pyrophosphate synthase [Dietzia cinnamea P4]
 gi|319436340|gb|EFV91476.1| geranylgeranyl pyrophosphate synthase [Dietzia cinnamea P4]
          Length = 339

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 71/203 (34%), Gaps = 21/203 (10%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGA-AIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           GK +RS L     +    +  T       A+E +H   L+HDDL   D    RRG+P + 
Sbjct: 39  GKGMRSTLFDVVYTTVGGSDETVRAAAGRALELLHEAFLVHDDLA--DGDDHRRGQPNLQ 96

Query: 109 IQYDEVTAI-----------------IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
            +     A                  + G+ LL  A    +          R    +   
Sbjct: 97  GRTAARAAERGLPAESAAHLGMVGGLLGGDLLLVAAMSEFARLPVPAPTLHRVLDEVHRA 156

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERL 210
               + G         +D      +   I   KT A  +C     GA++A A +   + L
Sbjct: 157 VVASVAGEYADVHGASEDAPAGCERALAIGAAKTAAYSVCLPLVLGAVLAGAPEEIVDPL 216

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           R  G +LG  +Q+ DD+L    D
Sbjct: 217 RETGRHLGTAYQVVDDVLGVFGD 239


>gi|255587638|ref|XP_002534338.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
 gi|223525465|gb|EEF28044.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
          Length = 333

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 84/232 (36%), Gaps = 22/232 (9%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------AL 73
             LL   A        + +   + Y + GGK  R   V +   L              A 
Sbjct: 17  KQLLEDPAFEWTPDSREWVNRMLDYNVPGGKLNRGLSVIDSYQLLKEGQELTEEEIFLAS 76

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +G  IE +  Y L+ DD+  MD  + RRG+P           I A +G+L     I   
Sbjct: 77  ALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGM-IAANDGVLLRN-HIPRI 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +       +L L + +       GQM+D+      E  +          I + KT
Sbjct: 133 LKNHFRGKAYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                        +MA  + ++   ++    ++GI FQ+ DD LDC  D PK
Sbjct: 192 AYYSFYLPVACALLMAGENLDDHIDVKNILVDMGIYFQVQDDYLDCFGD-PK 242


>gi|302812791|ref|XP_002988082.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii]
 gi|300144188|gb|EFJ10874.1| hypothetical protein SELMODRAFT_159144 [Selaginella moellendorffii]
          Length = 363

 Score = 99.9 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 90/248 (36%), Gaps = 26/248 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLGGKKIRSF----- 56
           G   +K  +   R+     +L+  + S   T +  + +   + Y + GGK  R       
Sbjct: 21  GSFKAKFMDAYHRLKK---ELIADSESFSHTFESREWVSEVLDYNVPGGKLNRGLSVVDS 77

Query: 57  LVTE-CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           LV        + + L  A  +G  IE +  Y LI DD+  MD+ + RRG+P    +  +V
Sbjct: 78  LVLLRSGEELSEDELFLAFALGWCIEWLQAYFLILDDI--MDDSHTRRGQPC-WFRQPKV 134

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
             I A +G+L     I    K    D    Q +  L   +  Q    GQMLD+      E
Sbjct: 135 GLIAANDGILLRN-HISRILKRHFHDKPYYQDLRELFDEVEYQTAC-GQMLDLITTPPGE 192

Query: 175 --------TQVFMIQKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLA 224
                        I K KT              M+      K E        +G  FQ+ 
Sbjct: 193 VDLSKYVMDTYLRIVKYKTAYYSFYLPVACALYMSGEDDKSKFESAERILVQMGTYFQIQ 252

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 253 DDYLDCYG 260


>gi|209870011|ref|NP_001119633.3| mitochondrial isoprenyl diphosphate synthase [Acyrthosiphon pisum]
          Length = 394

 Score = 99.9 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 79  PDVTKWLAKLLQYNVPGGKKNRGLALVLSYKMLSSPADQTDENIRLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGVLLEQSIYQLI---KKYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L +++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 THILELFYDVTMK-TSMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|329904645|ref|ZP_08273892.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547880|gb|EGF32635.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 281

 Score = 99.9 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 9/201 (4%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           +  + A   +      L+ A+ + L  GG+++R+ L    A   +++   A+ +   +E 
Sbjct: 12  VETRMAELARVSLPSTLVGALSHHLDSGGQRVRARLALYAAQALHLSDDDAVTIAVTVEL 71

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SLIHDDL   D    RRG  T+   + E  AI AG+ LL+ A+  +        D+
Sbjct: 72  LHNASLIHDDLQ--DRDVQRRGCATLWSAFGENVAICAGDLLLSAAYGNLCR----FSDS 125

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
            R   +L+  H       + GQ  D+  +  D      I   K+GAL+    E   I   
Sbjct: 126 TRLPQLLAQVHGATAS-AVHGQCADLSGQACDIALYEKIAAAKSGALLGLPLELVLIATG 184

Query: 202 ASQNEKERLRCFGENLGIIFQ 222
             +N     R   +   + +Q
Sbjct: 185 H-ENSLALARQAADAFAVGYQ 204


>gi|217968536|ref|YP_002353770.1| polyprenyl synthetase [Thauera sp. MZ1T]
 gi|217505863|gb|ACK52874.1| Polyprenyl synthetase [Thauera sp. MZ1T]
          Length = 258

 Score = 99.9 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 77/218 (35%), Gaps = 21/218 (9%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           P+ LQ + +R+D I+   +    +         +   + + L G ++ R  LV   A   
Sbjct: 9   PAWLQHDMERVDAIIRAHMNNDVA--------LIRQVVEFILHGAERRRPALVLASARAL 60

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDN---GYIRRGKPTVHIQYDEVTAIIAGNG 122
                    + AA+E IH    +HDD+           R G       +     I+ G+ 
Sbjct: 61  GHGGERPHALAAAVELIHISLALHDDVTEASGGAADGEREG-----ALFGNAGNILLGDL 115

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T AF +I         ++    +LS   N+  +G +  + L              I +
Sbjct: 116 LYTSAFRMIVDLG-----DMEVMRVLSDATNVIAEGEVAYRELLAAPASRTPEAWLDIAR 170

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            +   L     E  AI+  A    +  L  FG ++G  
Sbjct: 171 RRRAKLFEAGAECMAIVHGADPAARSALARFGLHVGSA 208


>gi|254729448|gb|ACT79808.1| mitochondrial farnesyl diphosphate synthase [Aphis gossypii]
          Length = 394

 Score = 99.9 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 79  PDVTKWLAKVLQYNVPGGKKNRGLALVLSFKMLSSPSDQTDENLRLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L +++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 VHILELFYDVTMK-TSMGQCLDMLTANSFKTKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|84708902|gb|AAI11257.1| FDPS protein [Bos taurus]
          Length = 421

 Score = 99.9 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 89/253 (35%), Gaps = 22/253 (8%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  QE     +    I+  L  +   H +      RL   + Y  +GGK  R
Sbjct: 69  MNGDQKLDAYAQERQDFIQHFSQIVKVLTEEDIGHPEIGDAITRLKEVLEYNAIGGKYNR 128

Query: 55  SF-LVTECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L         +   AL VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 129 GLTVVITFRELVEPGKQDPDSLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQTCW 186

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGG 162
           + +      AI     L +  + ++      +    D I   L  S    IG    ++  
Sbjct: 187 YQKPGIGLDAINDAFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITA 246

Query: 163 QMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGII 220
              ++      E +   I K KT          +   MA    + E    +     +G  
Sbjct: 247 PQGNVDLGRYTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEF 306

Query: 221 FQLADDLLDCEED 233
           FQ+ DD LD   D
Sbjct: 307 FQIQDDYLDLFGD 319


>gi|254586445|ref|XP_002498790.1| ZYRO0G18634p [Zygosaccharomyces rouxii]
 gi|238941684|emb|CAR29857.1| ZYRO0G18634p [Zygosaccharomyces rouxii]
          Length = 348

 Score = 99.9 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 92/252 (36%), Gaps = 29/252 (11%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+      L E  K +D +  DL          +  +R   ++ Y   GGK  R   V +
Sbjct: 1   MSDNKSKFLAEFPKIVDELKQDLAQYGMPSDAVEWYER---SLNYNTPGGKLNRGLSVVD 57

Query: 61  CASLFNVNHLTALR---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
             ++      T L          +G  IE +  Y L+ DD+  MD    RRG+P  +   
Sbjct: 58  TFAILKGTTATQLPSEQYSKLALLGWCIELLQAYFLVADDM--MDRSITRRGQPCWYKIE 115

Query: 112 D-EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +    AI     L    ++++   K+  +       ++ L H +  Q  L GQ+LD+   
Sbjct: 116 EVNEIAINDAFMLEAAIYKLL---KSHFRSEPYYIDLVELFHEVTFQTEL-GQLLDLITA 171

Query: 171 FIDETQVF--------MIQKMKTGAL-MCFACESGAIMAH-ASQNEKERLRCFGENLGII 220
             D+  +          I   KT              +A  +   + ++ +     LG  
Sbjct: 172 PEDKIDLSKFSPAKHSFIVIFKTAYYSFYLPVALAMYVAGISDPKDLKQAQDVLIPLGEY 231

Query: 221 FQLADDLLDCEE 232
           FQ+ DD LDC  
Sbjct: 232 FQIQDDYLDCYG 243


>gi|414611|emb|CAA53433.1| dimethylallyltransferase [Arabidopsis thaliana]
          Length = 343

 Score = 99.5 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 87/235 (37%), Gaps = 26/235 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-------R 74
           DLL   +     +    +   + Y + GGK  R   V +   L    +            
Sbjct: 19  DLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCA 78

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MDN   RRG+P           AI  G  L  +   I+  
Sbjct: 79  LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRIL-- 134

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +D      ++ L + + LQ    GQM+D+   F  E  +          I + KT
Sbjct: 135 -KKHFRDKPYYVDLVDLFNEVELQTAC-GQMIDLITTFEGEKDLSKYSLSIHRRIVQHKT 192

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                        +MA  +      ++    ++GI FQ+ DD LDC  D   L K
Sbjct: 193 AYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGK 247


>gi|63103159|gb|AAY33485.1| farnesyl diphosphate synthase-like protein [Choristoneura
           fumiferana]
          Length = 397

 Score = 99.5 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 28/251 (11%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
            S  Q   +  + +L  +L    ++ +     +  + L   + Y L GGKK R       
Sbjct: 52  ASPTQTKKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGLTTLFA 111

Query: 62  ASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             +              A  +G  +E +  + ++ DD+  MD    RRG P  +   +  
Sbjct: 112 YEMLEKPENITEETIYLAKTLGWCVEILQGFLVMLDDI--MDGSTTRRGVPCWYQLPEVG 169

Query: 115 -TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI- 172
             A+   + + +  F ++        D      ++ L +   +   + GQ LD+  E   
Sbjct: 170 LAAVNDSSLMFSSIFYVL---HAHFADKKIYTNLVELFNESLMHTSI-GQHLDVTMERRQ 225

Query: 173 -------DETQVFMIQKMKTGA-LMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQL 223
                     +   I K KT           G ++A+ S     ++       +G  FQ+
Sbjct: 226 KSDYSLFTIERYNAIVKYKTAYYTYQLPVCLGMLLANISDPVLHQKAEDMCLEIGKFFQI 285

Query: 224 ADDLLDCEEDL 234
            DD +DC  D 
Sbjct: 286 QDDYIDCYGDE 296


>gi|238062098|ref|ZP_04606807.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
 gi|237883909|gb|EEP72737.1| polyprenyl synthetase [Micromonospora sp. ATCC 39149]
          Length = 384

 Score = 99.5 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 30/213 (14%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI---HCYSLIHDDLPSMDNGYIRR 102
            L GGK++R                    V  A+  +   H ++L+HDD+  MD    RR
Sbjct: 73  VLAGGKRVRPTFAYWGWRGAAGGAEPLPAVLPALAALELLHTFALVHDDV--MDASDTRR 130

Query: 103 GKPTV----------------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           G+PT                   ++ E  A++ G+  + +A  +++         +  + 
Sbjct: 131 GRPTAHRAAAARHAAAGHTGDPERFGEAVAVLIGDLCMVWADRLLAHATVPPARLLDVRR 190

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
                    + G     + +         +   + + KT +   +  +   +        
Sbjct: 191 CYDQMRVETVAGQYLDILGENDAGNWSLDRALRVARYKTAS---YTVQRPLLFGALLAGA 247

Query: 207 K------ERLRCFGENLGIIFQLADDLLDCEED 233
                       +G  +G  FQL DDLL    D
Sbjct: 248 DADAPLTAAYTRYGLAVGEAFQLRDDLLGVYGD 280


>gi|115439441|ref|NP_001044000.1| Os01g0703400 [Oryza sativa Japonica Group]
 gi|2073375|dbj|BAA19856.1| farnesyl pyrophosphate synthase [Oryza sativa Japonica Group]
 gi|4063829|dbj|BAA36276.1| farnesyl diphosphate synthase [Oryza sativa Japonica Group]
 gi|21039025|dbj|BAB92292.2| putative farnesyl pyrophosphate synthetase [Oryza sativa Japonica
           Group]
 gi|113533531|dbj|BAF05914.1| Os01g0703400 [Oryza sativa Japonica Group]
 gi|215692629|dbj|BAG88049.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 353

 Score = 99.5 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 87/251 (34%), Gaps = 38/251 (15%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            +   E   R+    +++L   A     +    +   + Y +LGGK  R   V +   + 
Sbjct: 16  KAAFAEIYSRLK---EEMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGISVIDSFKML 72

Query: 66  NV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
                        A  +G  IE +  Y L+ DD+  MDN   RRG+P           A+
Sbjct: 73  KGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDI--MDNSQTRRGQPCWFRVPQVGLIAV 130

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
             G  L  +   I+       K  +    ++ L + +       GQ+LD+      E  +
Sbjct: 131 NDGIILRNHISRILQR---HFKGKLYYVDLIDLFNEVE-FKTASGQLLDLITTHEGEKDL 186

Query: 178 --------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGE------NLGIIFQ 222
                     I + KT             +++       E L  FG+       +G  FQ
Sbjct: 187 TKYNLTVHRRIVQYKTAYYSFYLPVACALLLSG------ENLDNFGDVKNILVEMGTYFQ 240

Query: 223 LADDLLDCEED 233
           + DD LDC  D
Sbjct: 241 VQDDYLDCYGD 251


>gi|170027724|ref|XP_001841747.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus]
 gi|167862317|gb|EDS25700.1| farnesyl-pyrophosphate synthetase [Culex quinquefasciatus]
          Length = 380

 Score = 99.5 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 88/243 (36%), Gaps = 21/243 (8%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            S+ +E       ++ DL      + +         A++Y +  GKK R         + 
Sbjct: 42  KSESREFMAVFPDLVRDLTDYIKKYDEKVAAKWFARALQYNVPQGKKNRGLAAVLAYRML 101

Query: 66  NVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
             +H         A  +G  IE      LI DD+  MD    RRG+P  +   D   TA+
Sbjct: 102 AKSHELTPENIRRAHYLGWCIEMFQSVFLICDDV--MDGSQTRRGQPCWYKVDDVKLTAV 159

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
              + L+  A  I    K Q  D      ++ + + I     + GQ LD+Q   +D TQ 
Sbjct: 160 N--DALMLDA-AIFHVLKKQFGDEPYYNKLVEMFNEIKFITTV-GQSLDLQSAKLDVTQY 215

Query: 178 FM-----IQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            M     I   KT     +   + A+            + +     +G  FQ  DD LDC
Sbjct: 216 TMDLYKSIVSHKTAYYTFYLPVALAMHMTGFNDPEVFRQTKTILLEIGRFFQAQDDFLDC 275

Query: 231 EED 233
             D
Sbjct: 276 FGD 278


>gi|119167462|gb|AAY33489.2| putative mitochondrial isoprenyl diphosphate synthase precursor
           [Megoura viciae]
          Length = 394

 Score = 99.5 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     +              +  +G  +E +  Y
Sbjct: 79  PDVTKWLAKMLQYNVPGGKKNRGLALVLSFKMLASPADQTDENLRLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGILLEQTIYQLI---KMYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L +++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 THILELFYDVAMK-TAMGQCLDMLAANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|153791944|ref|NP_001093302.1| farnesyl diphosphate synthase 3 [Bombyx mori]
 gi|146424710|dbj|BAF62115.1| farnesyl diphosphate synthase 3 [Bombyx mori]
          Length = 385

 Score = 99.5 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 85/239 (35%), Gaps = 25/239 (10%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LT 71
           I+D+L          +    +   + Y + GGKKIR         LF             
Sbjct: 57  IIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRL 116

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEI 130
           A   G   E +  Y +++DD+  MD    RRG P  +   D    AI     +    +EI
Sbjct: 117 ARVAGWCTEMLQAYLIMNDDI--MDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEI 174

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKT- 185
           +     + K+      + +        G      +  +++         + + I K KT 
Sbjct: 175 LKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTS 234

Query: 186 GALMCFACESGAIMA----HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL---PKK 237
              +      G I+     +A   + E + CF   +G +FQ+ DD +DC  +     KK
Sbjct: 235 YYSIKLPVVLGLILTQNRQNAPIEDIEGI-CF--EIGKLFQIQDDFMDCFGNETVTGKK 290


>gi|260785488|ref|XP_002587793.1| hypothetical protein BRAFLDRAFT_60406 [Branchiostoma floridae]
 gi|229272946|gb|EEN43804.1| hypothetical protein BRAFLDRAFT_60406 [Branchiostoma floridae]
          Length = 309

 Score = 99.5 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 68/189 (35%), Gaps = 12/189 (6%)

Query: 39  LLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L+    Y   + GK+IR  L+        +       +   ++ +H  SL+ DD+   DN
Sbjct: 20  LMEPYEYVCQVPGKQIRLQLIEAFNYWLQIPQDKLQTISNVVQMLHNASLLIDDIE--DN 77

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y     I   N +       +          I ++ +L L    G+ 
Sbjct: 78  SKLRRGIPVAHSIYGTAHTINCANYVYFKGLATVLMLNHPECTRIFTEQLLELHQGQGMD 137

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                     +     E +  ++ K KTG L   A +   + +    +         + L
Sbjct: 138 IYWRDTTTCPR-----EEEYKVMVKKKTGGLFGLAVKLMQLFSDNKSDFVP----LSDTL 188

Query: 218 GIIFQLADD 226
           G+ FQ+ DD
Sbjct: 189 GLYFQIRDD 197


>gi|241836196|ref|XP_002415093.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis]
 gi|215509305|gb|EEC18758.1| geranylgeranyl diphosphate synthase, putative [Ixodes scapularis]
          Length = 288

 Score = 99.5 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 20/194 (10%)

Query: 37  DRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
             +L    Y L + GK+IR+ L         ++      +G  ++ +H  SL+       
Sbjct: 8   QIILQPYHYILKIPGKQIRTKLAQAFNYWLKISPEKCQVIGEIVQMLHNASLLQ------ 61

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           DN  +RRG P  H  +   + I + N +     E            + ++ +L L    G
Sbjct: 62  DNSSLRRGVPVAHNIFGVASTINSANYVYFLGLEKCLELDNPRATAVFTEQILELHRGQG 121

Query: 156 LQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           ++       +  +D +I   E+    + K KTG L   A     + +    N  + +   
Sbjct: 122 ME-------IYWRDNYICPTESDYSRMVKRKTGGLFGLAVGLMQLFSENKGNFTKLIGT- 173

Query: 214 GENLGIIFQLADDL 227
              LG+ FQ+ DD 
Sbjct: 174 ---LGLYFQIRDDY 184


>gi|145616288|ref|XP_360889.2| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15]
 gi|145010025|gb|EDJ94681.1| hypothetical protein MGG_03432 [Magnaporthe oryzae 70-15]
          Length = 711

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 18/211 (8%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
             + ++  + + + IRY   +  K  RS LV   +   +V       + + I C+H  SL
Sbjct: 403 PPVHSRAEEVIQAPIRYIQSMPSKGFRSALVDCYSRWLDVPAREMESIKSVINCLHDSSL 462

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           I DD+   DN  +RRG P  H+ Y    AI +   L   A   I+S   +   ++  + +
Sbjct: 463 ILDDIE--DNSRLRRGFPATHVVYGAGPAINSATYLYVQAVAAINSLDNREMMDVLLRQL 520

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACE--SGAIMAH 201
                    Q +  GQ LD+            +   +   KTGA +    E    A   +
Sbjct: 521 ---------QNLFLGQSLDLHWTANRQCPTRDEYLGMVGQKTGAFISMVAELMIAASNVN 571

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + +  +     F    G+ +Q+ DD L+   
Sbjct: 572 SPEKTRAAFAAFSHLSGLYYQVRDDYLNITS 602


>gi|13383251|dbj|BAB39476.1| putative GGPP synthase 1 [Youngia japonica]
          Length = 126

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N   RRGKPT HI Y E  A++AG+ LL+++FE +++    +  +   + +  L   IG 
Sbjct: 1   NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHLATATKGVSSDRILRAIGELAKCIGS 60

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQK--MKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           +G++ GQ++DI                  +  AL+  +   GAIM   S  E E+LR F 
Sbjct: 61  EGLVAGQVVDICSRRRRCRIRPFGVYPFTQDAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120

Query: 215 ENLGI 219
            ++G+
Sbjct: 121 RSIGL 125


>gi|50302727|ref|XP_451300.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1346032|sp|P49349|FPPS_KLULA RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|453166|emb|CAA53614.1| Farnesyldiphosphatesynthetase [Kluyveromyces lactis]
 gi|49640431|emb|CAH02888.1| KLLA0A06732p [Kluyveromyces lactis]
 gi|1092509|prf||2024223A farnesyl diphosphate synthase
          Length = 349

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 39/263 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+      L+     +   L D+L      M  +  +    ++ Y   GGK  R   V +
Sbjct: 1   MSDNRAQFLEVFPSLVQE-LRDILA--GYGMPEEAIEWYEKSLNYNTPGGKLNRGLSVVD 57

Query: 61  CASLFNV----------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
             +L              +     +G  IE +  Y L+ DD+  MD    RRG+P  +  
Sbjct: 58  TYALLKGYKSVSELSAEEYKKVAILGWCIELLQAYFLVADDM--MDQSITRRGQPCWYKV 115

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLD 166
            +       G+  +  AF +  +    LK + R++     +L L H++  Q  L GQ+LD
Sbjct: 116 EN------VGDIAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELFHDVTFQTEL-GQLLD 168

Query: 167 IQDEFIDETQVF--------MIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGEN 216
           +     D+  +          I   KT     +   + A+ A       + ++       
Sbjct: 169 LITAPEDKVDLSKFSLEKHSFIVIFKTAYYSFYLAVALAMFAAGITDSKDLKQASDVLIP 228

Query: 217 LGIIFQLADDLLDCEE---DLPK 236
           LG  FQ+ DD LDC     D+ K
Sbjct: 229 LGEYFQIQDDFLDCFGKPEDIGK 251


>gi|75145468|sp|Q7XYS8|CHRDS_ARTSI RecName: Full=Monoterpene synthase FDS-5, chloroplastic; AltName:
           Full=Chrysanthemyl diphosphate synthase; Short=CPP
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Lavandulyl diphosphate synthase; Short=LPP
           synthase; Flags: Precursor
 gi|32329201|gb|AAP74721.1| chrysanthemyl diphosphate synthase [Artemisia spiciformis]
          Length = 394

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 92/249 (36%), Gaps = 25/249 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           ++  L S+  +     +T+  +L+              +   I Y + GGK +R + V +
Sbjct: 53  LSSNLNSQFMQV---YETLKSELIHDPLFEFDDDSRQWVERMIDYTVPGGKMVRGYSVVD 109

Query: 61  CASLFNVNHLTALRV--GAAI----ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE- 113
              L     LT        A+    E    + L+HDD+  MD  + RRG+P      +  
Sbjct: 110 SYQLLKGEELTEEEAFLACALGWCTEWFQAFILLHDDM--MDGSHTRRGQPCWFRLPEVG 167

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             AI  G  L  +   I+   K   +       ++ L  N      + GQM+D       
Sbjct: 168 AVAINDGVLLRNHVHRIL---KKHFQGKAYYVHLVDLF-NETEFQTISGQMIDTISRLAG 223

Query: 174 ETQV--------FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           + ++          I + K     C+       +M   + ++  +++     LG+ +Q+ 
Sbjct: 224 QKELSKYSMSLNRRIVQYKGAYYSCYLPIACALLMFGENLDDYVQVKDILVELGMYYQIQ 283

Query: 225 DDLLDCEED 233
           +D LD   D
Sbjct: 284 NDYLDTFGD 292


>gi|315024113|gb|ADR83704.1| farnesyl pyrophosphate synthase [Alisma plantago-aquatica]
          Length = 343

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR------- 74
           +LL   A        + +   + Y + GGK  R   V +   L       +         
Sbjct: 31  ELLEDPAFDFTDDAREWIEKMLDYNVPGGKLNRGLSVVDSYKLLKEGKELSEEELFLSCV 90

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P    +  +V  I A +G++     I    
Sbjct: 91  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRIPKVGLIAANDGIILRN-HIPRML 146

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQKMKTG 186
           +   K       +L L + +  Q    GQMLD+      ET            I + KT 
Sbjct: 147 QRHFKGKPYYVDLLDLFNEVEFQTAC-GQMLDLITTHEGETDLSKYKLPVYKRIVQYKTA 205

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                       +M+  + ++   ++     +G  FQ+ DD LDC  D PK
Sbjct: 206 YYSFYLPVACALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGD-PK 255


>gi|312381025|gb|EFR26873.1| hypothetical protein AND_06760 [Anopheles darlingi]
          Length = 479

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 83/231 (35%), Gaps = 21/231 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL------- 70
            ++ DL      + +       + A++Y +  GKK R         +   +         
Sbjct: 153 DLVRDLTEYGRKYDKNVATKWFVRALQYNVPQGKKNRGLASVLAYRMLAKHEDLTPENIR 212

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  IE +H   L+ DD+  MD   +RRG+P  H   D    AI  G  +    F 
Sbjct: 213 RAQYLGWCIEMLHSMFLMIDDI--MDGSAMRRGQPAWHTLDDVKMVAINDGIMIDAAIFY 270

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMK 184
           +I   K    +      +L     I     + GQ LD+    +D TQ  M     I   K
Sbjct: 271 VI---KKHFGNEPYYARLLEEFSEIKFITTI-GQSLDLLSAKMDVTQYTMDVYKSIVFHK 326

Query: 185 TGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T     +   + A+    +       + +     +G  +Q  DD LDC  D
Sbjct: 327 TAYYTFYLPVAMAMHMTGYTDPEMFRQAKTILLEIGQFYQAQDDFLDCFGD 377


>gi|196004414|ref|XP_002112074.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens]
 gi|190585973|gb|EDV26041.1| hypothetical protein TRIADDRAFT_24460 [Trichoplax adhaerens]
          Length = 286

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 12/189 (6%)

Query: 40  LSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           L   +Y + + GK+IR  L+    +   +       + + ++ +H  SL+ DD+   DN 
Sbjct: 1   LEPYQYIVQIPGKEIRVKLIQAFNNWLQIPEDKLAAISSVVQMLHNASLLIDDIE--DNS 58

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            +RRG P  H  +     I A N +   A   I S        I ++ ML L    GL  
Sbjct: 59  KLRRGVPVAHQIFGLAQTINAANYVYFKAMHEILSLNHPDGVKIFTEEMLELHQGQGLDI 118

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           +              E +  M+   KTG L   A     + +   +N    L      L 
Sbjct: 119 LWRDSHNCP-----SEEEYKMMVNKKTGGLFRLAVNLMQLFSENKRNFTPLL----NYLS 169

Query: 219 IIFQLADDL 227
           + FQ+ DD 
Sbjct: 170 LFFQIGDDY 178


>gi|1146159|gb|AAB07264.1| farnesyl diphosphate synthase short form [Arabidopsis thaliana]
          Length = 343

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 87/235 (37%), Gaps = 26/235 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-------R 74
           DLL   +     +    +   + Y + GGK  R   V +   L    +            
Sbjct: 19  DLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCA 78

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MDN   RRG+P           AI  G  L  +   I+  
Sbjct: 79  LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRIL-- 134

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +D      ++ L + + LQ    GQM+D+   F  E  +          I + KT
Sbjct: 135 -KKHFRDKPYYVDLVDLFNEVELQTAC-GQMIDLITTFEGEKDLAKYSLSIHRRIVQYKT 192

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                        +MA  +      ++    ++GI FQ+ DD LDC  D   L K
Sbjct: 193 AYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGK 247


>gi|156044020|ref|XP_001588566.1| hypothetical protein SS1G_10113 [Sclerotinia sclerotiorum 1980]
 gi|154694502|gb|EDN94240.1| hypothetical protein SS1G_10113 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 378

 Score = 99.1 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 73/208 (35%), Gaps = 12/208 (5%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +D+     S    +    L     Y     GK IR  L+        V   +   +   +
Sbjct: 75  NDMAFHGRSSWAPEKEKILFGPYDYLEAHPGKDIRKQLIAAFNEWLEVPPESLEVITKVV 134

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +        
Sbjct: 135 GMLHTASLLVDDVE--DSSLLRRGLPVAHSIFGTAQTINSANYVYFCALQELQKLNNPQA 192

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             I ++ +L+L    G+       +         E     +   KTG L   A +     
Sbjct: 193 ITIYTEELLNLHRGQGMDLFWRDSLTCP-----TEDDYLEMVGNKTGGLFRLAVKLMQAE 247

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDL 227
           +  S++    +      +GIIFQ+ DD 
Sbjct: 248 SKTSRDCVPLV----NLIGIIFQIRDDY 271


>gi|295656234|gb|AAK11525.2|AF279807_1 geranylgeranyl pyrophosphate synthase [Penicillium paxilli]
          Length = 375

 Score = 99.1 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK +R+ L+    S   V   +   +   +  +H  SL+ DD+   DN  +RRG P  H
Sbjct: 87  PGKDVRTQLIQAFNSWLQVPPESLAIISKVVTMLHTASLLIDDVE--DNSVLRRGVPVAH 144

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A + I   K     +I  + +L+L    G+        L  +
Sbjct: 145 NIFGTAQTINSANYVYFLALQEIQQLKNPAAIDIYVKELLNLHRGQGM-------DLFWR 197

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D      E +   +   KTG L   A +     + ++  +   L      +G+IFQ+ DD
Sbjct: 198 DTLTCPTEDEYLEMVGNKTGGLFRLAVKLMQAES-STGKDCVSLVNV---MGLIFQICDD 253

Query: 227 LLDC 230
            L+ 
Sbjct: 254 YLNL 257


>gi|119478047|ref|ZP_01618126.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [marine gamma
           proteobacterium HTCC2143]
 gi|119448753|gb|EAW29996.1| Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate
           synthetase)(OPP synthetase) [marine gamma
           proteobacterium HTCC2143]
          Length = 208

 Score = 99.1 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 9/117 (7%)

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L + AF+++ S       N+    +++   N   +G +  Q+    D    E Q F +  
Sbjct: 1   LYSRAFQLLVSIG-----NMPVMGLMADVTNTIAEGEVL-QLTKAGDPDTTEDQYFQVIT 54

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
            KT  L   A   GAI+A   Q   +    +G NLGI FQL DD+LD E    D+ K
Sbjct: 55  NKTAVLFAAATAGGAILAQQDQTTVDNYYQYGLNLGIAFQLIDDVLDYEGNAADMGK 111


>gi|257877744|ref|ZP_05657397.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20]
 gi|257811910|gb|EEV40730.1| trans-hexaprenyltranstransferase [Enterococcus casseliflavus EC20]
          Length = 177

 Score = 99.1 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 63/117 (53%), Gaps = 5/117 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTECASLFNVNHLTALRVGAAIECI 82
           L++ +  ++ +  ++ + ++ ++  GGK +R    +   A   + +   A+ + A+IE +
Sbjct: 23  LMEKSLKLKNKEVEQAILSMIHS--GGKLLRPAYQLLFSAYGSDKDREKAVALAASIEML 80

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           H  SLIHDD+  +D+   RR  PT+  ++    A+ AG+ L    F++++   + +K
Sbjct: 81  HTASLIHDDI--VDHADTRRKLPTIRSEFGNDVAVYAGDYLFVCCFKLMADYASSMK 135


>gi|148683291|gb|EDL15238.1| mCG17543, isoform CRA_a [Mus musculus]
          Length = 420

 Score = 99.1 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 86/256 (33%), Gaps = 28/256 (10%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  QE     +    I+  L  +   H +      RL   + Y  LGGK  R
Sbjct: 68  MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYNALGGKYNR 127

Query: 55  SFLVT-ECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V      L       A      L VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 128 GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQICW 185

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  + GQ LD+
Sbjct: 186 YQKPGIGL-DAINDALLLEA-SIYRLLKFYCREQPYYLNLLELFLQSSYQTEI-GQTLDL 242

Query: 168 QDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
                         E +   I K KT          +   MA    + E          +
Sbjct: 243 MTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEM 302

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ DD LD   D
Sbjct: 303 GEFFQVQDDYLDLFGD 318


>gi|317140569|gb|ADV03674.1| farnesyl pyrophosphate synthase [Alisma orientale]
          Length = 343

 Score = 99.1 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR------- 74
           +LL   A        + +   + Y + GGK  R   V +   L       +         
Sbjct: 31  ELLEDPAFDFTDDAREWIEKMLDYNVPGGKLNRGLSVVDSYKLLKEGKELSEEELFLSCV 90

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P    +  +V  I A +G++     I    
Sbjct: 91  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPC-WFRIPKVGLIAANDGIILRN-HIPRML 146

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQKMKTG 186
           +   K       +L L + +  Q    GQMLD+      ET            I + KT 
Sbjct: 147 QRHFKGKPYYVDLLDLFNEVEFQTAC-GQMLDLITTHEGETDLSKYKLPVYKRIVQYKTA 205

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                       +M+  + ++   ++     +G  FQ+ DD LDC  D PK
Sbjct: 206 YYSFYLPVACALLMSGENLDQFVDVKNILIEMGTYFQVQDDYLDCFGD-PK 255


>gi|157136626|ref|XP_001663796.1| farnesyl-pyrophosphate synthetase [Aedes aegypti]
 gi|108880982|gb|EAT45207.1| farnesyl-pyrophosphate synthetase [Aedes aegypti]
          Length = 430

 Score = 99.1 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 86/242 (35%), Gaps = 19/242 (7%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            S  +E       ++ DL      +  T      + A++Y +  GKK R         + 
Sbjct: 92  KSDAREFMAVFPDLVRDLTEYCKKYDNTLAPKWFVKALQYNVPQGKKNRGLAAVLAYRML 151

Query: 66  NVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
           + +          A  +G  IE      LI DD  +MD    RRG+P  +   D   +  
Sbjct: 152 SKSEDLTPENIRRAHYLGWVIEMFQAVFLICDD--AMDGSQTRRGQPCWYKLEDVKLS-G 208

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
             + L+  A  I    K Q  D      ++   + I     + GQ LD++   +D T+  
Sbjct: 209 INDALMIDA-AIFYVLKKQFGDEPYYSKLVETFNEIKFITTI-GQSLDLRSARMDVTKYT 266

Query: 179 M-----IQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           M     I   KT     +   + A+            + +     +G+ +Q  DD LDC 
Sbjct: 267 MDLYKSIVCHKTAYYTFYLPVALAMHMTGFTDPEVFRQTKTILLEIGLFYQTQDDFLDCF 326

Query: 232 ED 233
            D
Sbjct: 327 GD 328


>gi|51469024|emb|CAH18006.1| geranylgeranyl diphosphate synthase [Gibberella intermedia]
          Length = 343

 Score = 98.7 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 66/182 (36%), Gaps = 9/182 (4%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR   +        V       +   I  +H  SLI DD    DN  +RRGKP+ H  
Sbjct: 109 KGIRGAFIDSLNVWLEVPEDKTSVIKEVIGMLHNSSLIIDD--FQDNSPLRRGKPSTHTV 166

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +    AI     ++  A E I    +       + ++ S+       G            
Sbjct: 167 FGPAQAINTATYVIVKAIEKIQDIVSHDALADVTGMITSIFQ-----GQAMDLWWTANGI 221

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLL 228
                +  ++   KTGAL   + E  A+ + A  S +  E L      LG  FQ+ DD +
Sbjct: 222 VPSIQEYLLMVNDKTGALFRLSLELLALNSEASISDSTLESLSSVVSLLGQYFQIRDDYM 281

Query: 229 DC 230
           + 
Sbjct: 282 NL 283


>gi|296194290|ref|XP_002744865.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
           jacchus]
          Length = 372

 Score = 98.7 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 86/254 (33%), Gaps = 22/254 (8%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     QE  +    I+  L      H +T      L   + Y  +GGK  R
Sbjct: 20  MNGDQKSDVYAQEKQEFIQHFSQIVRVLTKDEMGHPETGDAIAWLKEVLEYNTIGGKYHR 79

Query: 55  SFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V                    AL VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 80  GLTVLVAFRELVEPRKQDADSLQRALTVGWCVELLQAFFLMTDDI--MDSSLTRRGQICW 137

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI     L    + ++     +    +    +   +      G     +  
Sbjct: 138 YQKPGVGLDAINDAILLEACVYRLLKLYCREQPYYLNLLELYLQSSYQTEIGQTLDLITA 197

Query: 167 IQD----EFIDETQVFMIQKMKTGALMCFACESGAI-MAHAS-QNEKERLRCFGENLGII 220
            QD    +   E +   I K KT     +   + A+ +A    + E    +     +G  
Sbjct: 198 PQDNVDLDRFTEKRYKSIVKYKTAFYSVYLPVAAAMYIAGIDGEKEHANAKKILLKMGEF 257

Query: 221 FQLADDLLDCEEDL 234
           FQ+ DD LD   DL
Sbjct: 258 FQIKDDYLDLFGDL 271


>gi|262195439|ref|YP_003266648.1| polyprenyl synthetase [Haliangium ochraceum DSM 14365]
 gi|262078786|gb|ACY14755.1| Polyprenyl synthetase [Haliangium ochraceum DSM 14365]
          Length = 348

 Score = 98.7 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 94/226 (41%), Gaps = 14/226 (6%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLFNV 67
            E S R+  +LD+   +  S +     +R  L  A  +    GK+ R+ LV  C  L   
Sbjct: 17  DEASARLLALLDESFAEIDSGLPPHLWERALLGPAREFLRRPGKQFRARLVEVCWRLAGG 76

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +    + +   +E +H  SLI DD+   D    RRG P +H  Y    A+  GN +  + 
Sbjct: 77  DSAMPIELPLVVELLHAGSLIVDDIE--DGSSTRRGGPALHHLYGTSIALNTGNWMYFWP 134

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ------ 181
             +I       + + RS  M   T    +     GQ LD+  +  +  Q  +        
Sbjct: 135 LTLIDRLD---QSSERSAEMHRRTRQTLVLC-HQGQALDLALKVTELEQSEVPHVVRATT 190

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           + KT ALM  A   GAI A A     + +  FG  LG+  Q+ DDL
Sbjct: 191 RSKTSALMSLAAALGAIAAGAESRVLDAVTRFGTELGVGLQMLDDL 236


>gi|169139097|gb|ACA48701.1| farnesyl diphosphate synthase 1 [Myzus persicae]
          Length = 394

 Score = 98.7 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 81/220 (36%), Gaps = 28/220 (12%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
           T+   +LL    Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 82  TKWPAKLLQ---YNVPGGKKNRGLALVLSYKMLSSPSDQTDENLKLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGVLLEQAIYQLI---KKYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L  ++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 THILELFFDVTMK-TAMGQCLDMLTANSFKSKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|50309979|ref|XP_455003.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644138|emb|CAH00090.1| KLLA0E23299p [Kluyveromyces lactis]
          Length = 315

 Score = 98.7 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 11/214 (5%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           D L Q   +   Q    +     Y L   GK++R+ L+ E   L+ V   +   V A I+
Sbjct: 6   DSLDQIIYNDTLQTTKPVTEPFEYLLKQQGKRVRTLLIEEFGKLYEVPKPSIDAVSAFID 65

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG    H +Y   T + +           +S  K   K+
Sbjct: 66  ELHTASLLIDDIE--DNAELRRGHVAAHKKYGIWTTLNS-----AQCAVYVSISKLLAKE 118

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
           +  S   +     I L  +  GQ +  +D+ I     + + + K KTG L          
Sbjct: 119 HEPSLPSIINDELIRLH-VGQGQDIYWRDDGIVPSVNEYYEMAKNKTGGLFRLMVRLLHA 177

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++     +K  L       GI++Q+ DD L+   
Sbjct: 178 LSKKELAQKYDLIPLANAAGILYQIRDDYLNLFS 211


>gi|296813323|ref|XP_002846999.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
           113480]
 gi|238842255|gb|EEQ31917.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
           113480]
          Length = 345

 Score = 98.7 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 79/219 (36%), Gaps = 18/219 (8%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           L+D+  +  +         +     Y     GK+ R+ L++       V+  +   +   
Sbjct: 36  LEDIDTRGQNRWTEHKEQTIRGPYDYITSKPGKEFRTQLLSAFNVWLKVSPDSLQCISGV 95

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQ 137
           I  +H  SL+ DD+   DN  +RRG+P  H  +     I + N +   A   +   P ++
Sbjct: 96  IRMLHNASLLVDDIQ--DNSRLRRGRPVAHSVFGVAQTINSANFVYFLALAELQKLPHSK 153

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               I +  MLSL    G+       +         E     +   KTG L   A +   
Sbjct: 154 EAMEIFTAEMLSLHRGQGMDLFWRDTLSCP-----SEDDYLEMVSNKTGGLFRLAIK--- 205

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDL-----LDCE 231
            +  A    K         LG+IFQ+ DD      LD  
Sbjct: 206 -LMQAECETKVDCMPLVNLLGLIFQITDDYRNLASLDYT 243


>gi|4503685|ref|NP_001995.1| farnesyl pyrophosphate synthase isoform a [Homo sapiens]
 gi|209571582|ref|NP_001129293.1| farnesyl pyrophosphate synthase isoform a [Homo sapiens]
 gi|114560081|ref|XP_001160391.1| PREDICTED: farnesyl pyrophosphate synthase isoform 10 [Pan
           troglodytes]
 gi|114560083|ref|XP_001160109.1| PREDICTED: farnesyl diphosphate synthase isoform 4 [Pan
           troglodytes]
 gi|114560085|ref|XP_001160151.1| PREDICTED: farnesyl diphosphate synthase isoform 5 [Pan
           troglodytes]
 gi|114560087|ref|XP_001160203.1| PREDICTED: farnesyl diphosphate synthase isoform 6 [Pan
           troglodytes]
 gi|114560089|ref|XP_001160292.1| PREDICTED: farnesyl diphosphate synthase isoform 8 [Pan
           troglodytes]
 gi|215274250|sp|P14324|FPPS_HUMAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|14603061|gb|AAH10004.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase)
           [Homo sapiens]
 gi|55957735|emb|CAI12715.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase)
           [Homo sapiens]
 gi|119573461|gb|EAW53076.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase),
           isoform CRA_b [Homo sapiens]
 gi|119573462|gb|EAW53077.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase),
           isoform CRA_b [Homo sapiens]
 gi|119573463|gb|EAW53078.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase),
           isoform CRA_b [Homo sapiens]
 gi|123993591|gb|ABM84397.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase)
           [synthetic construct]
 gi|123998535|gb|ABM86869.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase)
           [synthetic construct]
 gi|158255604|dbj|BAF83773.1| unnamed protein product [Homo sapiens]
 gi|168269804|dbj|BAG10029.1| farnesyl pyrophosphate synthetase [synthetic construct]
          Length = 419

 Score = 98.7 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 67  MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 126

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 127 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 184

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 185 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 240

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 241 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 300

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 301 MGEFFQIQDDYLDLFGD 317


>gi|225709438|gb|ACO10565.1| Geranylgeranyl pyrophosphate synthetase [Caligus rogercresseyi]
          Length = 303

 Score = 98.7 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 16/197 (8%)

Query: 33  TQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            + +  LL    Y L   GK IR  L+T   S   +   T  ++   I+ +H  SL+ DD
Sbjct: 12  AKEDKLLLEPFTYLLQAKGKNIRKKLLTAFNSWLKIPSDTLNKISDIIQMLHNASLLLDD 71

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +   D+G +RRG P     + E + I   N ++  A E +          + S+ +L L 
Sbjct: 72  IE--DSGILRRGIPVSRKIFGEPSTINCANYVMFIALEKVIELNHPSAAKVFSEQLLELH 129

Query: 152 HNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G++       +  +D +    E +   +   KTG L         + +    N  + 
Sbjct: 130 RGQGME-------IYWRDNYQCPTEKEYRQMCIRKTGGLFALGVRLMQLFSSEEGNYIQL 182

Query: 210 LRCFGENLGIIFQLADD 226
           +    E LG+ FQ+ DD
Sbjct: 183 V----ELLGLYFQIRDD 195


>gi|40788949|dbj|BAA03523.2| KIAA1293 [Homo sapiens]
          Length = 420

 Score = 98.7 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 68  MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 127

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 128 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 185

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 186 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 241

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 242 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 301

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 302 MGEFFQIQDDYLDLFGD 318


>gi|197097558|ref|NP_001125620.1| farnesyl pyrophosphate synthase [Pongo abelii]
 gi|55728661|emb|CAH91070.1| hypothetical protein [Pongo abelii]
          Length = 419

 Score = 98.7 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 89/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +T     RL   + Y  +GGK  R
Sbjct: 67  MNGDQKSDVYAQEKQDFVQHFSQIVRMLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 126

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 127 GLTVVVAFRELVQPRKQDADSLQRARTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 184

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 185 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 240

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 241 LITAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 300

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 301 MGEFFQIQDDYLDLFGD 317


>gi|213407468|ref|XP_002174505.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
           yFS275]
 gi|212002552|gb|EEB08212.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
           yFS275]
          Length = 354

 Score = 98.7 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 89/245 (36%), Gaps = 26/245 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHM-----QTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           ++   + + +   L+ +   ++          D    ++ +  LGGK  R   V +   +
Sbjct: 11  EDKRAKFEAVFPILVDEIVDYLTSVNVPQDAKDWFKKSLYHNTLGGKYNRGLSVIDTYEI 70

Query: 65  FNV---NHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            +    +  +  R       IE +  + L+ DD+  MD    RRG+P  +     V +I 
Sbjct: 71  LSGKALDDNSYFRAALLGWCIELLQAFFLVADDM--MDESKTRRGQPCWY-LMPNVGSIA 127

Query: 119 AGN-GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-------DIQDE 170
             +  +L  A   +   K   +       +L L H +  Q  LG ++         +   
Sbjct: 128 INDSFMLESAIYFL--LKKHFRHETYYVDLLDLFHEVTFQTTLGQELDLLTAPENHVDLS 185

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLL 228
              + +   I   KT     +   + A+     A+ +  +R       LG  FQ+ DD L
Sbjct: 186 KFSQDKHAFIVIFKTAYYSFYLPVALAMCMANVATPDNLQRASDVLIPLGKYFQIQDDYL 245

Query: 229 DCEED 233
           DC  D
Sbjct: 246 DCYGD 250


>gi|289615531|emb|CBI57772.1| putative farnesyltranstransferase [Sordaria macrospora]
          Length = 436

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 18/211 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +D    +      +    L     Y L G  GK IRS +V    +  +V   +   +   
Sbjct: 118 EDFFSPSRRTWSEEKEKVLTGPYDY-LNGHPGKDIRSQMVKAFNAWLDVPSESLEVITKV 176

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           I  +H  SL+ DD+   DN  +RRG P  H  +     I   N +  +A + +   K   
Sbjct: 177 ISMLHTASLLVDDVE--DNSVLRRGFPVAHSIFGIPQTINTSNYVYFHALQELQKLKNPK 234

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESG 196
             +I S+ +L+L    G+        L  +D      E     +   KTG L     +  
Sbjct: 235 AVSIFSEELLNLHRGQGM-------DLFWRDTLTCPTEDDYLEMVSNKTGGLFRLGIKLM 287

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              +  S  +   L      +G+IFQ+ADD 
Sbjct: 288 QAESR-SPVDCVPLVNI---IGLIFQIADDY 314


>gi|285013665|gb|ADC32809.1| farnesyl pyrophosphate synthase [Medicago sativa]
          Length = 342

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 80/228 (35%), Gaps = 21/228 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALR 74
           +LL   A          +   + Y + GGK  R   V +   L        +     A  
Sbjct: 18  ELLHDPAFEWSEDSRQWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFQASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P           I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGM-IAANDGVLLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           +   K       +L L + +       GQM+D+      E  +          I + KT 
Sbjct: 134 RKHFKGKPYYVELLDLFNEVE-FQTAAGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       +MA    +    ++     +G  FQ+ DD LDC  D
Sbjct: 193 YYSFYLPVACALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDCFGD 240


>gi|327350942|gb|EGE79799.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 405

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 75/201 (37%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK IR   +T      +V   +   +   +  +H  SL+ 
Sbjct: 87  WSPEKEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLV 146

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  +     I + N +   A E +   K+    NI +  +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLN 204

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G+       +         E     +   KTG L   A +     +  S  +   
Sbjct: 205 LHRGQGMDVFWRDTLTCP-----TEEDYLEMVGNKTGGLFRLAIKLMQAESD-SGIDCVA 258

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L      +G+IFQ+ DD L+ 
Sbjct: 259 LVNL---MGLIFQICDDYLNL 276


>gi|261198611|ref|XP_002625707.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
           SLH14081]
 gi|239594859|gb|EEQ77440.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
           SLH14081]
          Length = 405

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 75/201 (37%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK IR   +T      +V   +   +   +  +H  SL+ 
Sbjct: 87  WSPEKEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLV 146

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  +     I + N +   A E +   K+    NI +  +L+
Sbjct: 147 DDVE--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLN 204

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G+       +         E     +   KTG L   A +     +  S  +   
Sbjct: 205 LHRGQGMDVFWRDTLTCP-----TEEDYLEMVGNKTGGLFRLAIKLMQAESD-SGIDCVA 258

Query: 210 LRCFGENLGIIFQLADDLLDC 230
           L      +G+IFQ+ DD L+ 
Sbjct: 259 LVNL---MGLIFQICDDYLNL 276


>gi|6831550|sp|Q92236|GGPPS_GIBFU RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|1524045|emb|CAA65644.1| geranylgeranyl pyrophosphate synthetase [Gibberella fujikuroi]
          Length = 418

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 76/214 (35%), Gaps = 12/214 (5%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DL          +  + +     Y +   GK  R+ L+       +V   +   +   +
Sbjct: 112 EDLEFTAKRSWTDEKENVVRGPYDYVISHPGKDFRAQLIGAFNVWLDVPTSSLEVITRVV 171

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I +GN +   A + +        
Sbjct: 172 GMLHESSLLIDDVQ--DSSELRRGFPVAHNIFGVAQTINSGNYIYFVALQELHKLNNPEL 229

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
             I S  +++L    G+       +         E     +   KTG L     +  A  
Sbjct: 230 ITIFSDELVNLHRGQGMDLFWCDTLTCP-----TEEDYLEMVGNKTGGLFRLGIKLMAAE 284

Query: 200 A-HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           A   S  +   L      +G+IFQ+ DD ++   
Sbjct: 285 ANGPSPTDCVPLVNL---IGLIFQIRDDYMNLSS 315


>gi|260945739|ref|XP_002617167.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238849021|gb|EEQ38485.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 374

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 26/234 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC---------ASLFNVN 68
             L ++L+Q   +M  +  D     + Y   GGK  R   V +          A L    
Sbjct: 43  QELKEILVQ--YNMPQEAIDWFTKNLNYNTPGGKLNRGLSVIDTYCILKNKSLADLSQEE 100

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
           +     +G AIE +  Y L+ DD+  MD    RRG+P  ++        I  + +L  A 
Sbjct: 101 YKKVAILGWAIELLQAYFLVADDM--MDQSKTRRGQPCWYLVEGVGNIAINDSFMLEGAI 158

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQ-----VFMI 180
            ++   K   + +     +L L H +  Q  L GQ+LD     +E +D  +        I
Sbjct: 159 YVL--LKKHFRQDPYYVDLLDLFHEVTFQTEL-GQLLDLVTADEEHVDLDKFSLAKHSFI 215

Query: 181 QKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT     +   + A+      S+ + +++R     LG  FQ+ DD LDC  
Sbjct: 216 VIFKTAYYSFYLPVALAMFMCGINSEQDLKQVRDILIPLGEYFQIQDDYLDCFG 269


>gi|241620359|ref|XP_002408650.1| polyprenyl synthetase, putative [Ixodes scapularis]
 gi|215503009|gb|EEC12503.1| polyprenyl synthetase, putative [Ixodes scapularis]
          Length = 355

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA----IECIHCYSLIHDDL 92
           +    A  Y L GGK+ R   V     L     +  L +       +E +  Y LI DD+
Sbjct: 50  EAFREAAEYNLPGGKRNRLLAVVHAYELLAEESVPHLELACVLGWCVEMLQSYFLILDDI 109

Query: 93  PSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
             MD   +RRG+P+ +        AI     L      ++      L+  +    +   +
Sbjct: 110 --MDGSPVRRGRPSWYTVPGVGLRAINDALFLEKAVLWVVRRRLGHLRCYLPLSELFQES 167

Query: 152 HNIGLQGMLGGQMLDIQDEFIDE-----TQVFMIQKMKTG-ALMCFACESGAIMAHA-SQ 204
                   + GQ LD+  +          + + I   KT          +G ++A     
Sbjct: 168 D----LRTVLGQGLDMLSQKSTLDALRADRYWAIVTYKTAFYSFVLPVRAGMLLAGVEDP 223

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
               + +     LG +FQ+ DD +DC  D
Sbjct: 224 GLHAQAQQAALQLGRVFQVQDDYIDCFGD 252


>gi|156547931|ref|XP_001604464.1| PREDICTED: similar to farnesyl diphosphate synthase [Nasonia
           vitripennis]
          Length = 364

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 74/226 (32%), Gaps = 18/226 (7%)

Query: 24  LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHLTALRV 75
           L +   H+      + L   ++Y +  GKK R   +            L   N   A  +
Sbjct: 39  LTEAGRHLDVPEATKWLAKVLQYNVPSGKKNRGLSLVYAYRKLAPPDQLTEDNVRLARIL 98

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  +E +  + L+ DD+  MD+   RRG+P  +   +   A I    L+  A   +    
Sbjct: 99  GWCVEMVQAFFLVLDDV--MDHSESRRGQPCWYRHSNIGLAAINDGILIEQAVYQLLRTH 156

Query: 136 TQLKD------NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL- 188
            + K           Q  L  T    L  +          +     +   I K KTG   
Sbjct: 157 FRGKPCYVDLFETLQQNTLKTTMGQTLDQLATNFSKKPNLDLFTMDRYNSIVKYKTGYYS 216

Query: 189 MCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                +     A         + +     +G  FQ+ DD LDC  D
Sbjct: 217 FVMPVQLAMYFAGVKDPEMHRQAKTILLEMGHFFQVQDDYLDCFGD 262


>gi|85000425|ref|XP_954931.1| prenyl transferase [Theileria annulata strain Ankara]
 gi|65303077|emb|CAI75455.1| prenyl transferase, putative [Theileria annulata]
          Length = 468

 Score = 98.3 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 28/169 (16%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SLIHDD+  +D   +RR   + H ++    +++ G+ LL+ + +II+S +    
Sbjct: 162 ELVHIGSLIHDDI--IDESDVRRNLMSSHKKFGVKFSVLFGDFLLSKSAQIITSLQ---- 215

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC--------- 190
            NI+    LS T +  + G L    L+  D ++          +KT +L+          
Sbjct: 216 -NIKLVDKLSNTLDNLIHGELMYVNLNNNDLYLS---YLYKIYLKTASLISNNISSISHF 271

Query: 191 -------FACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDC 230
                  +  + G  +   S      E L   G ++G+ FQ+ DDLLD 
Sbjct: 272 TNKYTPRYDSQLGIGIFTFSVTTLYNELLYIIGVHIGLSFQMCDDLLDY 320


>gi|121714909|ref|XP_001275064.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus
           clavatus NRRL 1]
 gi|119403220|gb|EAW13638.1| geranylgeranyl pyrophosphate synthase (AtmG), putative [Aspergillus
           clavatus NRRL 1]
          Length = 359

 Score = 98.3 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 17/203 (8%)

Query: 36  NDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            ++++SA    L G  GK IR  L++       +       +   I  +H  SL+ DD+ 
Sbjct: 69  QEKIISAPLDYLSGFPGKDIRGKLISSFNEWLKIPEQKLDIIKRVIGLLHTASLLIDDIQ 128

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+  +RRG P  H  +     I + N    +A + +          I +  +L L   
Sbjct: 129 --DSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELQKLGKSDALAIFTDELLRLHRG 186

Query: 154 IGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G+        L  +D  I   E +   +   KTG L   A +   + +  ++ +   L 
Sbjct: 187 QGM-------DLYWRDSLICPTEEEYLDMVSNKTGGLFRLAIKLMQMESQ-NERDCVPLV 238

Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
                LGIIFQ+ DD  + + DL
Sbjct: 239 DL---LGIIFQIRDDYQNLQSDL 258


>gi|164605010|dbj|BAF98301.1| farnesyl-diphosphate synthase [Hevea brasiliensis]
          Length = 342

 Score = 98.3 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 83/228 (36%), Gaps = 21/228 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALR 74
           +LL   A          +   + Y + GGK  R   V +   L              A  
Sbjct: 18  ELLEDPAFEWTPDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKEGQELTEEEIFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD+ + RRG+P           I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRVPKVGL-IAANDGILLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDETQV-----FMIQKMKTG 186
           K   +       +L L + +       GQM+D     +E  D ++        I + KT 
Sbjct: 134 KKHFRGKAYYVDLLDLFNEVE-FQTASGQMIDLITTLEEEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       ++A  + +    ++     +GI FQ+ DD LDC  D
Sbjct: 193 YYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFGD 240


>gi|226508116|ref|NP_001141329.1| hypothetical protein LOC100273420 [Zea mays]
 gi|194704004|gb|ACF86086.1| unknown [Zea mays]
 gi|238008686|gb|ACR35378.1| unknown [Zea mays]
          Length = 355

 Score = 98.3 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 26/248 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
               +  +E   ++     ++L   A     +    +   + Y +LGGK  R   V +  
Sbjct: 15  ADTKTAFKEIYSKLKQ---EMLEDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVVDSY 71

Query: 63  SLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            +              A  +G  IE +  Y L+ DD+  MDN   RRG+P          
Sbjct: 72  KILKGVDVLSKEETFLACTLGWCIEWLQAYFLVLDDI--MDNSQTRRGQPCWFRVPQVGL 129

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A+  G  L  +   I+       K       ++ L + +       GQMLD+      E
Sbjct: 130 IAVNDGIILRNHISRILQR---HFKGKPYYVDIIDLFNEVE-FKTASGQMLDLITTHEGE 185

Query: 175 TQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +          I + KT             ++A  +      ++     +G  FQ+ D
Sbjct: 186 KDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLAGENLENFVDVKNILVEMGTYFQVQD 245

Query: 226 DLLDCEED 233
           D LDC  D
Sbjct: 246 DYLDCFGD 253


>gi|195333389|ref|XP_002033374.1| GM20447 [Drosophila sechellia]
 gi|194125344|gb|EDW47387.1| GM20447 [Drosophila sechellia]
          Length = 419

 Score = 98.3 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 78/227 (34%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ D++  T ++  +         ++Y +  GKK R  L             L   N  
Sbjct: 93  DLVRDIITVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 152

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+P  H   +   TAI     +    + 
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYA 210

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGAL 188
           I+    + L   +    +      I   G    Q+   +            I + KT   
Sbjct: 211 ILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAY- 269

Query: 189 MCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
             F       +  A   + E  R        +G  FQ+ DD LDC  
Sbjct: 270 YSFYLPFALALHMAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFG 316


>gi|50355599|dbj|BAD29965.1| Phoma betae geranylgeranyl diphosphate synthase
          Length = 343

 Score = 98.3 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 19/183 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK++R+ L+        V   +   +G  +  +H  SL+ DD+   DN  +RRGKP   
Sbjct: 67  PGKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASLLIDDIQ--DNSELRRGKPVAQ 124

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A E ++S K     +I ++ +L          +  GQ +D+ 
Sbjct: 125 NIFGTALTINSANYVYFLALEKLNSLKNPNITDIFTEELLR---------LHRGQAMDLY 175

Query: 169 DEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                    E + F +   KTG L           +    +    +    E LG+IFQ+ 
Sbjct: 176 WRDTLTCPTEEEYFEMVANKTGGLFRLMYRMMKAESSMPIDLLPVV----ELLGVIFQVV 231

Query: 225 DDL 227
           DD 
Sbjct: 232 DDY 234


>gi|325095662|gb|EGC48972.1| geranylgeranyl diphosphate synthase [Ajellomyces capsulatus H88]
          Length = 375

 Score = 97.9 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 72/201 (35%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK +R   +       +V   +   +   +  +H  SL+ 
Sbjct: 59  WSPEKEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLV 118

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  +     I + N +   A E +   K     NI  + +L+
Sbjct: 119 DDVE--DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKNPNVINIYVKELLN 176

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G+       +         E     +   KTG L   A +    +  A  +    
Sbjct: 177 LHRGQGMDVFWRDTLTCP-----TEEDYLEMVGNKTGGLFRLAIK----LMQAESDTGID 227

Query: 210 LRCFGENLGIIFQLADDLLDC 230
                  +G+IFQ+ DD L+ 
Sbjct: 228 CVTLVNLMGLIFQICDDYLNL 248


>gi|255075269|ref|XP_002501309.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299]
 gi|226516573|gb|ACO62567.1| farnesyl-pyrophosphate synthetase [Micromonas sp. RCC299]
          Length = 342

 Score = 97.9 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 86/242 (35%), Gaps = 24/242 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           ++  +    + D+L+       Q     D +   + Y +  GK  R   V +     N  
Sbjct: 6   KKFLEVFQQLKDELVQAEKDDAQVAIAVDWIDKMVEYNVPHGKLNRGLAVVDGMRALNPA 65

Query: 69  H------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-EVTAIIAGN 121
                    A+ VG  IE +    L+ DD+  MD    RRG+P        E+ AI  G 
Sbjct: 66  GVSDDQMHRAMVVGWCIEWLQAAFLVWDDI--MDESVTRRGQPCWFRNPKVEMVAINDG- 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--------D 173
             L    +I S  K   K +     +L + H I       GQ+LD+    I         
Sbjct: 123 --LVLECQIYSMLKKHCKAHAGYAELLEMFHEI-TYKTASGQLLDLITAPIGEVDLSKYT 179

Query: 174 ETQVFMIQKMKTGALMCFACESGAI-MAHA-SQNEKERLRCFGENLGIIFQLADDLLDCE 231
           E     I   KT     +   + A+ ++         +     E LG  FQ+ DD LDC 
Sbjct: 180 EEAYMRIVTYKTAYYTFYLPAAAAMHLSGVTDPAAFAKANEICEKLGQFFQIQDDYLDCY 239

Query: 232 ED 233
            D
Sbjct: 240 GD 241


>gi|225557933|gb|EEH06218.1| geranylgeranyl pyrophosphate synthase [Ajellomyces capsulatus
           G186AR]
          Length = 403

 Score = 97.9 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 72/201 (35%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK +R   +       +V   +   +   +  +H  SL+ 
Sbjct: 87  WSPEKEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLV 146

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  +     I + N +   A E +   K     NI  + +L+
Sbjct: 147 DDVE--DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKNPNVINIYVKELLN 204

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G+       +         E     +   KTG L   A +    +  A  +    
Sbjct: 205 LHRGQGMDVFWRDTLTCP-----TEEDYLEMVGNKTGGLFRLAIK----LMQAESDTGID 255

Query: 210 LRCFGENLGIIFQLADDLLDC 230
                  +G+IFQ+ DD L+ 
Sbjct: 256 CVTLVNLMGLIFQICDDYLNL 276


>gi|255715471|ref|XP_002554017.1| KLTH0E12430p [Lachancea thermotolerans]
 gi|238935399|emb|CAR23580.1| KLTH0E12430p [Lachancea thermotolerans]
          Length = 326

 Score = 97.9 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 6/210 (2%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           L + L   A H  ++    L     Y     GK  R+ L+    S + +       +   
Sbjct: 7   LIEELANEAPHWTSEEESNLRRPFDYLTSSPGKNFRAELIQIFNSFYELPDHRIAIISKL 66

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  SL+ DD+   D+   RRG    H+ Y     I   N +  YA E +       
Sbjct: 67  VETLHTSSLLIDDIE--DSSEWRRGLKAAHLVYGVPMTINTANYMYFYAMECLKELGNGC 124

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESG 196
            D   ++L++     +       G  +  +D F+   E +   +   KTG L        
Sbjct: 125 DDLSLNKLLIIFNEEMMDLHRGQGLDIYWRDCFMVPTEPEYLNMVMNKTGGLFRLTVRLM 184

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADD 226
            + +  S +  + L      LGI++Q+ DD
Sbjct: 185 EVFS-PSFSGAKSLVPLSNLLGILYQIRDD 213


>gi|29135293|ref|NP_803463.1| farnesyl pyrophosphate synthase [Bos taurus]
 gi|75054285|sp|Q8WMY2|FPPS_BOVIN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|18087503|gb|AAL58886.1|AF461050_1 farnesyl diphosphate synthase [Bos taurus]
 gi|151557019|gb|AAI49573.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase)
           [Bos taurus]
 gi|296489639|gb|DAA31752.1| farnesyl pyrophosphate synthetase [Bos taurus]
          Length = 353

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 89/253 (35%), Gaps = 22/253 (8%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  QE     +    I+  L  +   H +      RL   + Y  +GGK  R
Sbjct: 1   MNGDQKLDAYAQERQDFIQHFSQIVKVLTEEDIGHPEIGDAITRLKEVLEYNAIGGKYNR 60

Query: 55  SF-LVTECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L         +   AL VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVITFRELVEPGKQDPDSLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQTCW 118

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGG 162
           + +      AI     L +  + ++      +    D I   L  S    IG    ++  
Sbjct: 119 YQKPGIGLDAINDAFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITA 178

Query: 163 QMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGII 220
              ++      E +   I K KT          +   MA    + E    +     +G  
Sbjct: 179 PQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEF 238

Query: 221 FQLADDLLDCEED 233
           FQ+ DD LD   D
Sbjct: 239 FQIQDDYLDLFGD 251


>gi|255937223|ref|XP_002559638.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584258|emb|CAP92291.1| Pc13g12220 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 369

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 78/205 (38%), Gaps = 16/205 (7%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
             ++++  L+    Y     GK IR  L+    +   V   +   +   +  +H  SL+ 
Sbjct: 62  WSSKNDKILMGPYDYVHEHPGKDIRRQLIHAFNAWLQVPPASLSIITKVVTMLHTSSLLI 121

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   DN  +RRG P  H  +     I + N +   A + +         +I  Q ML+
Sbjct: 122 DDVE--DNSVLRRGIPVAHNIFGTAQTINSANYVYFLALQEVQQLNNPAAIDIYVQEMLN 179

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+        L  +D      E +   +   KTG L   A +     +  +  + 
Sbjct: 180 LHRGQGM-------DLFWRDTLTCPTEDEYLEMVGNKTGGLFRLAVKLMQAES-TTGKDC 231

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
             L      +G+IFQ+ DD L+   
Sbjct: 232 VALVNV---MGLIFQICDDYLNLSS 253


>gi|164426247|ref|XP_960695.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A]
 gi|166214942|sp|P24322|GGPPS_NEUCR RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName: Full=Albino-3 protein;
           AltName: Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|157071260|gb|EAA31459.2| geranylgeranyl pyrophosphate synthetase [Neurospora crassa OR74A]
          Length = 433

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 18/211 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +D    +      +    L     Y L G  GK IRS +V    +  +V   +   +   
Sbjct: 116 EDFFSPSRRTWSEEKEKVLTGPYDY-LNGHPGKDIRSQMVKAFDAWLDVPSESLEVITKV 174

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           I  +H  SL+ DD+   DN  +RRG P  H  +     I   N +  YA + +   K   
Sbjct: 175 ISMLHTASLLVDDVE--DNSVLRRGFPVAHSIFGIPQTINTSNYVYFYALQELQKLKNPK 232

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESG 196
             +I S+ +L+L    G+        L  +D      E     +   KTG L     +  
Sbjct: 233 AVSIFSEELLNLHRGQGM-------DLFWRDTLTCPTEDDYLEMVSNKTGGLFRLGIKLM 285

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              +  S  +   L      +G+IFQ+ADD 
Sbjct: 286 QAESR-SPVDCVPLVNI---IGLIFQIADDY 312


>gi|903319|gb|AAC13867.1| geranylgeranyl pyrophosphate synthetase [Neurospora crassa]
 gi|28949983|emb|CAD70868.1| farnesyltranstransferase (al-3) [Neurospora crassa]
          Length = 428

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 18/211 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +D    +      +    L     Y L G  GK IRS +V    +  +V   +   +   
Sbjct: 111 EDFFSPSRRTWSEEKEKVLTGPYDY-LNGHPGKDIRSQMVKAFDAWLDVPSESLEVITKV 169

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           I  +H  SL+ DD+   DN  +RRG P  H  +     I   N +  YA + +   K   
Sbjct: 170 ISMLHTASLLVDDVE--DNSVLRRGFPVAHSIFGIPQTINTSNYVYFYALQELQKLKNPK 227

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESG 196
             +I S+ +L+L    G+        L  +D      E     +   KTG L     +  
Sbjct: 228 AVSIFSEELLNLHRGQGM-------DLFWRDTLTCPTEDDYLEMVSNKTGGLFRLGIKLM 280

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              +  S  +   L      +G+IFQ+ADD 
Sbjct: 281 QAESR-SPVDCVPLVNI---IGLIFQIADDY 307


>gi|217072134|gb|ACJ84427.1| unknown [Medicago truncatula]
          Length = 251

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 82/228 (35%), Gaps = 21/228 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALR 74
           +LL   A          +   + Y + GGK  R   V +   L        +     A  
Sbjct: 18  ELLHDPAFEWSEDSRQWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFQASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P  +        I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWYRVPKVGM-IAANDGVLLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           +   K       +L L + +       GQM+D+      E  +          I + KT 
Sbjct: 134 RKHFKGKPYYVELLDLFNEVE-FQTAAGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       +MA  + +    ++     +G  FQ+ DD LDC  D
Sbjct: 193 YYSFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGD 240


>gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
            [Trichinella spiralis]
          Length = 1241

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 20/231 (8%)

Query: 5    LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
            +P  L  + KR+D   D+ +L + S   ++  + L++  +Y   + GK+IR  L      
Sbjct: 906  VPRALSTSQKRMDK--DNSMLLSLSPPASKEEEELIAPFKYICSIPGKQIRVKL--GFNL 961

Query: 64   LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              NV++     +   +E +H  SL+ DD+   D+  +RRG P  H  Y   T +   N +
Sbjct: 962  WLNVDNEIVNAISEIVEMLHNASLMIDDIE--DSSELRRGMPVTHRIYGLPTTLNTANYI 1019

Query: 124  LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
               A       + +    + ++ +L L    G++       +  +D  I   E +   + 
Sbjct: 1020 YFVALSKTVQLRHRDAVKVFTESLLDLHRGQGME-------IYWRDAVICPTEAKYLDMV 1072

Query: 182  KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KTG L         + +    +  + L          FQ+ DD ++   
Sbjct: 1073 IKKTGGLFRLGVNMLQLFSTNKTDYNQLLNDMATY----FQIRDDYMNLVA 1119


>gi|25452946|sp|O24242|FPPS2_PARAR RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase
           2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 2; AltName:
           Full=Dimethylallyltranstransferase 2; AltName:
           Full=Farnesyl diphosphate synthase 2; AltName:
           Full=Geranyltranstransferase 2
 gi|1532052|emb|CAA57893.1| farnesyl diphosphate synthase [Parthenium argentatum]
          Length = 342

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 88/247 (35%), Gaps = 23/247 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  + SK     +  DT+  +L+   A          +   + Y + GGK  R   V +
Sbjct: 1   MSTDIRSKF---LQVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVID 57

Query: 61  CASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              L     LT      A  +G  +E +  Y L+ DD+  MD  + RRG+P         
Sbjct: 58  SYQLLKGGKLTDDEIFHASALGWCVEWLQAYFLVLDDI--MDESHTRRGQPCWFRLPKVG 115

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
             I A +G++     +    K   +       ++ L + +       GQM+D+    + E
Sbjct: 116 M-IAANDGIILRN-HVPRILKKHFRGKPYYVDLVDLFNEVE-FQTASGQMIDLITTLVGE 172

Query: 175 TQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +          I + KT             +M      +   ++     +G  FQ+ D
Sbjct: 173 KDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMGTYFQVQD 232

Query: 226 DLLDCEE 232
           D LDC  
Sbjct: 233 DYLDCFG 239


>gi|67516745|ref|XP_658258.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4]
 gi|40746274|gb|EAA65430.1| hypothetical protein AN0654.2 [Aspergillus nidulans FGSC A4]
 gi|259489078|tpe|CBF89051.1| TPA: Geranylgeranyl diphosphate synthase
           [Source:UniProtKB/TrEMBL;Acc:Q874I1] [Aspergillus
           nidulans FGSC A4]
          Length = 396

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 80/207 (38%), Gaps = 16/207 (7%)

Query: 27  TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                  ++ + ++    Y L   GK +R  ++        V   +   +   +  +H  
Sbjct: 71  KDGKWSQENEEVIMGPYDYMLQHPGKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTA 130

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   DN  +RRG P  H  Y     I + N +   A + +   K+    +I  Q
Sbjct: 131 SLLIDDVE--DNSLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDIYVQ 188

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +L+L    G+        L  +D      E +   +   KTG L   A +     + ++
Sbjct: 189 ELLNLHRGQGM-------DLFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVKLMQAES-ST 240

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
             +   L      LG++FQ+ DD L+ 
Sbjct: 241 GKDCVALVNV---LGLVFQICDDYLNL 264


>gi|71041845|pdb|1WL1|A Chain A, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima H74a Mutant
 gi|71041846|pdb|1WL1|B Chain B, Crystal Structure Of Octaprenyl Pyrophosphate Synthase
           From Hyperthermophilic Thermotoga Maritima H74a Mutant
          Length = 299

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 27/226 (11%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +L++  +RI+ IL     +                ++   L GK +R  L         V
Sbjct: 12  ELEKVKERIEQILSQFFPEQI--------------MKDLPLYGKMLRVRLSILSFKNRGV 57

Query: 68  N-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                A+   AA+E +   SL+HDD+  +D    RRGK T++  Y +  A+ AG+ +L  
Sbjct: 58  EIGEDAISSLAALELVALASLLHDDV--IDGARFRRGKETINFMYGDKAAVAAGDLVLVS 115

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           AF  +              ++  ++    ++ +        + + I + +   I + K+G
Sbjct: 116 AFHTVEEIGNNKLRRAFLNVIGKMSEAELIEQL-------SRYKPITKEEYLRIVEGKSG 168

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           AL   A +  A++        E L   G  +G I+Q+ DD++D   
Sbjct: 169 ALFGLALQLPALLEG---ELGEDLYNLGVTIGTIYQMFDDIMDFAG 211


>gi|154271672|ref|XP_001536689.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus
           NAm1]
 gi|150409359|gb|EDN04809.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces capsulatus
           NAm1]
          Length = 375

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 73/201 (36%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK +R   +       +V   +   +   +  +H  SL+ 
Sbjct: 59  WSPEKEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLV 118

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  +     I + N +   A E +   K+    NI  + +L+
Sbjct: 119 DDVE--DSSTLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYVKELLN 176

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G+       +         E     +   KTG L   A +    +  A  +    
Sbjct: 177 LHRGQGMDVFWRDTLTCP-----TEDDYLEMVGNKTGGLFRLAIK----LMQAESDTGID 227

Query: 210 LRCFGENLGIIFQLADDLLDC 230
                  +G+IFQ+ DD L+ 
Sbjct: 228 CVTLVNLMGLIFQICDDYLNL 248


>gi|22676905|gb|AAM98379.1| farnesyl diphosphate synthase [Hevea brasiliensis]
 gi|34013692|gb|AAQ56011.1| farnesyl diphosphate synthase [Hevea brasiliensis]
          Length = 342

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 81/228 (35%), Gaps = 21/228 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALR 74
           +LL   A          +   + Y + GGK  R   V +   L              A  
Sbjct: 18  ELLEDPAFEWTPDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKEGQELTEEEIFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD+ + RRG+P           I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRVPKVGL-IAANDGILLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   +       +L L + +       GQM+D+      E  +          I + KT 
Sbjct: 134 KKHFRGKAYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       ++A  + +    ++     +GI FQ+ DD LDC  D
Sbjct: 193 YYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFGD 240


>gi|119167460|gb|AAY33488.2| putative mitochondrial isoprenyl diphosphate synthase precursor
           [Aphis fabae]
          Length = 394

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCY 85
                 L   ++Y + GGKK R   +     + +            +  +G  +E +  Y
Sbjct: 79  PDVTKWLAKVLQYNVPGGKKNRGLALVPSFKMLSSPSDQTDENLRLSYILGWCVEILQAY 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            L+ DD+  MDN   RRG+P  +   D    A+  G  L    +++I   K   KD    
Sbjct: 139 QLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGILLEQTIYQLI---KKYFKDKPYY 193

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMIQKMKTGALMCFACES 195
             +L L +++ ++    GQ LD+           E         I K KT     F    
Sbjct: 194 VHILELFYDVTMK-TSMGQCLDMLTANSFKTKKLEKYTMENYTAIVKYKTAYYSFFLPVC 252

Query: 196 GAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A+            + +     +G  FQ+ DD LDC  D
Sbjct: 253 LAMRMTNINDPEIFRQAKTILLEMGHFFQVQDDFLDCYGD 292


>gi|242212320|ref|XP_002471994.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728918|gb|EED82802.1| predicted protein [Postia placenta Mad-698-R]
          Length = 327

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 16/214 (7%)

Query: 21  DDLLLQTASHMQTQHNDR--LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGA 77
           D L    A H + + +D   +L    Y +   GK +R  ++       +V       +G 
Sbjct: 17  DTLRYTLARHSEWRQSDEKSVLEPYTYLISHSGKDVRGQMINAFNEWLHVPKDQLAIIGR 76

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +  +H  SL+ DD+   D+  +RRG P  H  Y     I   N +   AF+ +S+ +  
Sbjct: 77  IVGMLHNASLLVDDVE--DDSQLRRGNPVAHKIYGIPQVINTANYVYFQAFQEVSALQAS 134

Query: 138 LK----DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
                   I    +L+L    GL  +    +         E +   +   KTG L   A 
Sbjct: 135 CDKYDLHTIVIDELLNLHRGQGLDLLWRDTLTCP-----SEQEYIAMVNNKTGGLFRLAV 189

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               +MA+A+ +           +GI FQ+ DD 
Sbjct: 190 RL--MMANATTSVGVDFIPLVNLIGIYFQIRDDY 221


>gi|196013707|ref|XP_002116714.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens]
 gi|190580692|gb|EDV20773.1| hypothetical protein TRIADDRAFT_31406 [Trichoplax adhaerens]
          Length = 352

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 94/244 (38%), Gaps = 31/244 (12%)

Query: 18  TILDDLLLQTASHMQTQH--NDRLLSAIRY-------ALLGGKKIRSFLVTECASLF--- 65
           T+ D L  Q  + +      ND+ + AI++        + GGK+ R   V   A L    
Sbjct: 15  TLFDQLFPQLVTELTEDGLANDQTVDAIQWMKKSLECNVPGGKRNRGLSVIATARLLVAP 74

Query: 66  ----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
               + +   AL +G  +E +  + L+ DD+  MD+   RRG+P      +  T  I  +
Sbjct: 75  QELSDEDIKGALILGWCVEFLQAFFLVADDI--MDDSVTRRGQPCWFRNPEIGTIAINDS 132

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------IQDEFIDE 174
            ++      +   K   +       +L L H       + GQ LD       +       
Sbjct: 133 FMIESCIYKL--LKKYFRSQPYYADLLDLMHETTYDTEV-GQTLDLITAPSYVDFSRFSI 189

Query: 175 TQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   I K KT     +   + A+    + S+ + +  R     +G  FQ+ DD LDC  
Sbjct: 190 ERYRAIVKYKTAIYSFYLPVALAMTMTKNNSEVDYQDARQVLMQMGEYFQIQDDFLDCFG 249

Query: 233 DLPK 236
           D PK
Sbjct: 250 D-PK 252


>gi|55710092|gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]
          Length = 342

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 85/244 (34%), Gaps = 24/244 (9%)

Query: 7   SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           S L+     + ++L  DLL   A          +   + Y + GGK  R   V +   L 
Sbjct: 2   SDLKTRFLEVYSVLKSDLLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61

Query: 66  NV-----NHLTALRVG--AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
                  +    L       IE +  Y L+ DD+  MD  + RRG+P           AI
Sbjct: 62  KEGKELSDDEIVLSSALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRIPKVGMIAI 119

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
             G  L  +   I+   K   +       +L L + +  Q    GQM+D+    + E  +
Sbjct: 120 NDGILLRNHIPRIL---KKHFRQKPYYVDLLDLFNEVEFQTAC-GQMIDLITTLVGEKDL 175

Query: 178 --------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                     I + KT             +MA     +   ++     +G  FQ+ DD L
Sbjct: 176 SKYSLPIHRRIVQYKTAYYSFYLPVACALLMAGEDLEKHTNVKDILIEMGTYFQVQDDYL 235

Query: 229 DCEE 232
           DC  
Sbjct: 236 DCFG 239


>gi|29468176|gb|AAO85432.1|AF479566_1 geranylgeranyl diphosphate synthase [Emericella nidulans]
          Length = 396

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 16/207 (7%)

Query: 27  TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                  ++ + ++    Y L   GK +R  ++        V   +   +   +  +H  
Sbjct: 71  KDGKWSQENEEVIMGPYDYMLQHPGKDLRRQMINAFNVWLKVPSESLAIITKVVAMLHTA 130

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   DN  +RRG P  H  Y     I + N +   A + +   K+    ++  Q
Sbjct: 131 SLLIDDVE--DNSLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKSPAAIDMYVQ 188

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +L+L    G+        L  +D      E +   +   KTG L   A +     + ++
Sbjct: 189 ELLNLHRGQGM-------DLFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVKLMQAES-ST 240

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
             +   L      LG++FQ+ DD L+ 
Sbjct: 241 GKDCVALVNV---LGLVFQICDDYLNL 264


>gi|322794010|gb|EFZ17248.1| hypothetical protein SINV_11878 [Solenopsis invicta]
          Length = 354

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 76/219 (34%), Gaps = 23/219 (10%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNHLTALRVGAAIECIHCY 85
                 +   + Y +  GKKIR   +            L   N   A  +   +E +  Y
Sbjct: 39  PDVAKWMEKVLEYNVPNGKKIRGLTLICVYKSLVPNDQLTEDNIRLAQILAWCVEMMQAY 98

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
            L+ DD+   D    RRG+P  H   +   A +    LL  A   I     Q K+   S 
Sbjct: 99  LLVLDDIQ--DQSLFRRGQPCWHRYNNIGEAAVNDGVLLESAMYYILRKHFQGKE---SY 153

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFID---------ETQVFMIQKMKTG-ALMCFACES 195
             L  T    +   L GQ LD+     D           ++  + K KT          +
Sbjct: 154 CNLVETFQDAIFKTLMGQCLDLNSTNFDKKPNLNLFTMDRLNSVIKFKTAHYTYVLPIIA 213

Query: 196 GAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEED 233
              +A    +E   + +     +G +FQ+ DD LDC  D
Sbjct: 214 AMHLAGIKDSEMFNQAQAILLEIGRLFQVQDDYLDCFGD 252


>gi|241994864|gb|ACS74708.1| farnesyl pyrophosphate synthase [Michelia chapensis]
          Length = 351

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 88/252 (34%), Gaps = 27/252 (10%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
             GL S   +   R+ +   DLL   A          +   + Y + GGK  R   V + 
Sbjct: 10  TSGLRSVFLQVYARLKS---DLLQDPAFDWTEDSRQWIDRMLEYNVPGGKLNRGLSVIDS 66

Query: 62  ASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L       +         +G  IE +  Y L+ DD+  MD  + RRG+P         
Sbjct: 67  YQLLKDGQELSEDEIFLSCSLGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVD 124

Query: 115 -TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             AI  G  L  +   II   +   ++      +L L + +       GQMLD+      
Sbjct: 125 MIAINDGILLRNHIPRII---RKNFREKSYYVDLLDLFNEVE-FQTASGQMLDLITTHEG 180

Query: 174 ETQ--------VFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E             I + KT             +M+  + +    ++     +G  FQ+ 
Sbjct: 181 EKDLSKYTMPVYCRIVQYKTAYYSFYLPVACALLMSGENLDNFTDVKNILIEMGTYFQVQ 240

Query: 225 DDLLDCEEDLPK 236
           DD LDC  D PK
Sbjct: 241 DDYLDCYGD-PK 251


>gi|239610018|gb|EEQ87005.1| geranylgeranyl pyrophosphate synthetase [Ajellomyces dermatitidis
           ER-3]
          Length = 405

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 12/198 (6%)

Query: 34  QHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +    LL    Y +   GK IR   +T      +V   +   +   +  +H  SL+ DD+
Sbjct: 90  EKEKILLGPYDYMVQQPGKDIRRQFITAFNRWLHVPEDSIAIITKVVAMLHTASLLVDDV 149

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              D+  +RRG P  H  +     I + N +   A E +   K+    NI +  +L+L  
Sbjct: 150 E--DSSNLRRGVPVAHNIFGTAQTINSANYVYFLALEEVQKLKSPNVINIYATELLNLHR 207

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             G+       +         E     +   KTG L   A +     +  S  +   L  
Sbjct: 208 GQGMDVFWRDTLTCP-----TEEDYLEMVGNKTGGLFRLAIKLMQAESD-SGIDCVALVN 261

Query: 213 FGENLGIIFQLADDLLDC 230
               +G+IFQ+ DD L+ 
Sbjct: 262 L---MGLIFQICDDYLNL 276


>gi|75233327|sp|Q7XYT0|FPPS2_ARTSI RecName: Full=Farnesyl diphosphate synthase 2; Includes: RecName:
           Full=Dimethylallyltranstransferase; Includes: RecName:
           Full=(2E,6E)-farnesyl diphosphate synthase
 gi|32329197|gb|AAP74719.1| farnesyl diphosphate synthase [Artemisia spiciformis]
          Length = 342

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 88/248 (35%), Gaps = 25/248 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+  L S+     +  D++  DL+   A        + +   + Y + GGK  R   V +
Sbjct: 1   MSIDLKSRF---LQVYDSLKSDLIHDPAFEFDDDSRNWVERMLDYNVPGGKLNRGLSVVD 57

Query: 61  CASLFNVNH--LTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              L          + +  A    IE +  Y L+ DD+  MD  + RRG+P         
Sbjct: 58  SYKLLKQEELTEDEVFLACALGWCIEWLQAYFLVLDDI--MDESHTRRGQPCWFRLPKVG 115

Query: 115 -TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD------- 166
             A+  G  L  +   I+   K   +       +L L + +       GQM+D       
Sbjct: 116 MIAVNDGVVLRNHIPRIL---KKHFRGKAYYADLLDLFNEVE-FQTASGQMIDLITTLFG 171

Query: 167 -IQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
             +      +    I K KT             +M   + ++  +++     +G  FQ+ 
Sbjct: 172 QKELSKYSLSTHQRIVKFKTAYYSFYLPVACALLMFGENLDDHVQVKDVLVEMGTYFQVQ 231

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 232 DDYLDCFG 239


>gi|5678609|emb|CAA08918.2| dimethylallyltransferase [Agrotis ipsilon]
          Length = 427

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 82/227 (36%), Gaps = 21/227 (9%)

Query: 24  LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFN-------VNHLTALRV 75
           L +T  H+      + L   ++Y +  GKK R         +          N   A  +
Sbjct: 103 LTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATVLAYKMLEKKENLTPENIHLANMM 162

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G +IE  H + L+ +D+  M+   +RRG P  + ++ EV      +  L  A  + S+ K
Sbjct: 163 GWSIEMFHTHQLLLNDI--MEGAEMRRGAPCWY-KHPEVGLSGINDAALIQA-AMFSTLK 218

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-------IDETQVFMIQKMKTGA- 187
               +    + +L   + + L+  +G  + +   +            +   I K KT   
Sbjct: 219 RHFNNKFFYKSVLETFNEMLLKCSIGHFLENQMAKTDKPDLTLFTMEKYEAITKYKTSYH 278

Query: 188 LMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                     +M          + +     +G  FQ+ DD LDC  D
Sbjct: 279 TFQMPVTLALLMTGVEDPETHRQAKNILLKMGEFFQIQDDFLDCFGD 325


>gi|212960746|gb|ACJ38671.1| farnesyl pyrophosphate synthase [Chimonanthus praecox]
          Length = 358

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 85/248 (34%), Gaps = 21/248 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           NG +        +  D +  +LL  +A          +   + Y + GGK  R   V + 
Sbjct: 14  NGKISDPRSAFMRAYDRLKSELLQDSAFDFTDDSRQWIDRMLDYNVPGGKLNRGLSVIDS 73

Query: 62  A-------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
                    L       A  +G  IE +  Y L+ DD+  MD  + RRG+P         
Sbjct: 74  YKSLKQGKELSEEEIFLACVLGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVD 131

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
             I   +G+L     I    +   ++      +L L + +       GQMLD+      E
Sbjct: 132 M-IAVNDGILLRN-HIPRILRRHFREKPYYVDLLDLFNEVE-FQTASGQMLDLITTHEGE 188

Query: 175 TQ--------VFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
           +            I + KT             +M+  +      ++     +G  FQ+ D
Sbjct: 189 SDLSKYSMPVYRRIVQYKTAYYSFYLPVACALLMSGENLENFIDVKNILIEMGTYFQVQD 248

Query: 226 DLLDCEED 233
           D LDC  D
Sbjct: 249 DYLDCFGD 256


>gi|74141499|dbj|BAE38529.1| unnamed protein product [Mus musculus]
          Length = 353

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 84/255 (32%), Gaps = 26/255 (10%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  QE     +    I+  L  +   H +      RL   + Y  LGGK  R
Sbjct: 1   MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGEAIARLKEVLEYNALGGKYNR 60

Query: 55  SFLVT-ECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V      L       A      L VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  +G  +  +
Sbjct: 119 YQKPGIGL-DAINDALLLEA-SIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLM 176

Query: 168 QDE-------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLG 218
                        E +   I K KT          +   MA    + E          +G
Sbjct: 177 TAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMG 236

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DD LD   D
Sbjct: 237 EFFQVQDDYLDLFGD 251


>gi|330961585|gb|EGH61845.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 116

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
            GGK++R  LV  C             + A IE +H  +L+HDD+  M    +RRG+ T 
Sbjct: 42  AGGKRLRPLLVLLCGKALGREGDDVRLLAATIEFLHTATLLHDDVVDM--SGMRRGRSTA 99

Query: 108 HIQYDEVTAIIAGNGLL 124
           +  +    +++ G+ L 
Sbjct: 100 NALWGNAPSVLVGDFLY 116


>gi|322705366|gb|EFY96952.1| geranylgeranyl pyrophosphate synthetase AtmG [Metarhizium
           anisopliae ARSEF 23]
          Length = 337

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 79/210 (37%), Gaps = 16/210 (7%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S +   + + + +   Y L L GK +RS +++       +       +   +  +H  SL
Sbjct: 30  SSIAAGYEEIIRAPFDYLLNLPGKDVRSKMISAFNEWLCIPADKLEVIKRIVMLLHNASL 89

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+   D+  +RRG P  H  +     I A N     A + +          I ++ +
Sbjct: 90  LIDDIQ--DSSKLRRGLPVSHHIFGVPQTINAANYAYFLAQQELPKLGDPKAFEIYTEEL 147

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS---- 203
           LSL    G+             +   E + F +   KTG L   A     + +  +    
Sbjct: 148 LSLHRGQGMDI-----YWREASKCPTEEEYFSMVSHKTGGLFRLAIRLMQLASDKNWFVF 202

Query: 204 -QNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +   L      LG+IFQ+ DD L+ + 
Sbjct: 203 HTRDFVPLVNV---LGVIFQIRDDYLNLQS 229


>gi|31747831|gb|AAO38414.1| Lfe206p1 [Leptospirillum ferrooxidans]
          Length = 150

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 151 THNIGLQGMLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
            H  GL GM+GGQMLD++ E   I    +  + + KTGAL+  +   GA++    ++E  
Sbjct: 1   AHGSGLSGMVGGQMLDMESEGRKISLDDLEFLHRHKTGALILSSVRIGALLGQGGESEMR 60

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP 235
            L  +GE +G+ FQ+ADDLLD E D  
Sbjct: 61  SLDQYGEAVGVAFQIADDLLDVEGDTA 87


>gi|61680786|pdb|1YQ7|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With
           Risedronate
 gi|61680822|pdb|1YV5|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Mg And
           Risedronate
 gi|158429256|pdb|2OPN|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-527
 gi|162329947|pdb|2OPM|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-461
          Length = 374

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 22  MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 81

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 82  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 139

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 140 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 195

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 196 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 255

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 256 MGEFFQIQDDYLDLFGD 272


>gi|281338720|gb|EFB14304.1| hypothetical protein PANDA_018257 [Ailuropoda melanoleuca]
          Length = 420

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 80/242 (33%), Gaps = 23/242 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           Q+  +    I+  L      H +      RL   + Y  +GGK  R   V          
Sbjct: 82  QDFIQHFSQIVKVLTEDGVGHPEMGDAIARLKEVLEYNAVGGKYHRGLTVLIAFQELVEP 141

Query: 69  H-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                     AL VG  +E +  + L+ DD+  MD+   RRG+   + +          +
Sbjct: 142 RKQDADSLRRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQLCWYQKPGIGL-DAIND 198

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--------FID 173
            LL  A  I    K   ++      ++ L      Q  + GQ LD+              
Sbjct: 199 ALLLEA-CIYRLLKLYCREQPYYLNLIELFLQSSYQTEI-GQTLDLITAPQGSVDVGRFT 256

Query: 174 ETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCE 231
           E +   I K KT          +   MA    + E    +     +G  FQ+ DD LD  
Sbjct: 257 EKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLF 316

Query: 232 ED 233
            D
Sbjct: 317 GD 318


>gi|182399|gb|AAA52423.1| farnesyl pyrophosphate synthetase (EC 2.5.1.1) [Homo sapiens]
          Length = 353

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 1   MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 60

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQTCW 118

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 119 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 174

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 175 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 234

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 235 MGEFFQIQDDYLDLFGD 251


>gi|170595477|ref|XP_001902397.1| Polyprenyl synthetase family protein [Brugia malayi]
 gi|158589952|gb|EDP28754.1| Polyprenyl synthetase family protein [Brugia malayi]
          Length = 334

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 83/231 (35%), Gaps = 19/231 (8%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL 70
           E  KRI   +   +            DR+     +++ GGK  RS L+ E          
Sbjct: 11  EGIKRI--AMQKFVTSLQERETKCIRDRIDKLFDHSVCGGKYKRSILLVEAYKALGGRQD 68

Query: 71  T-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
                    + A +E +  + LI DD+  MD G  RRGKP  H            +GLL 
Sbjct: 69  EERMKMVTNIAACLELLQSFFLIEDDV--MDEGVNRRGKPCWHRLEGIGI-NGINDGLLL 125

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM---IQK 182
                      ++  ++R         +   +  + GQ+LD   + +++        I +
Sbjct: 126 DCMVSYILRSNRVSADVR------DAFDEARRVTILGQILDGDTKSVEDCTWQRHQSITQ 179

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KT     F     A +  A     E ++     LG +FQ  DD +DC  D
Sbjct: 180 HKTSHYTYFTPLQIAALLTAQPLIIEPVKRIAYLLGYLFQSKDDYMDCFGD 230


>gi|149048094|gb|EDM00670.1| rCG62519, isoform CRA_b [Rattus norvegicus]
          Length = 420

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 86/256 (33%), Gaps = 28/256 (10%)

Query: 1   MNGGLPSKL--QENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG     +  QE     +    I+  L      H +      R+   + Y  +GGK  R
Sbjct: 68  MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 127

Query: 55  SFLVTECA-SLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V +    L       A      L VG  +E +  + L+ DD+  MD+ + RRG+   
Sbjct: 128 GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDI--MDSSHTRRGQICW 185

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  + GQ LD+
Sbjct: 186 YQKPGIGL-DAINDALLLEA-AIYRLLKFYCREQPYYLNLLELFLQSSYQTEI-GQTLDL 242

Query: 168 QDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
                         E +   I K KT          +   MA    + E          +
Sbjct: 243 ITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEM 302

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ DD LD   D
Sbjct: 303 GEFFQIQDDYLDLFGD 318


>gi|302781879|ref|XP_002972713.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii]
 gi|300159314|gb|EFJ25934.1| hypothetical protein SELMODRAFT_173042 [Selaginella moellendorffii]
          Length = 363

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 89/248 (35%), Gaps = 26/248 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQT-QHNDRLLSAIRYALLGGKKIRSF----- 56
           G   +K  +   R+     +L+  + S   T +  + +   + Y + GGK  R       
Sbjct: 21  GSFKAKFMDAYHRLKK---ELITDSESFSHTFESREWVSKMLDYNVPGGKLNRGLSVVDS 77

Query: 57  LVTE-CASLFNVNHL-TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           LV        + + L  A  +G  IE +  Y L+ DD+  MD+ + RRG+P    +  +V
Sbjct: 78  LVLLRSGEELSEDELFLAFALGWCIEWLQAYFLVLDDI--MDDSHTRRGQPC-WFRQPKV 134

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
             I A +G+L     I         D    Q +  L   +  Q    GQMLD+      E
Sbjct: 135 GLIAANDGILLRN-HISRILTRHFHDKPYYQDLRELFDEVEYQTAC-GQMLDLITTPPGE 192

Query: 175 --------TQVFMIQKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLA 224
                        I K KT              M+      K E        +G  FQ+ 
Sbjct: 193 VDLSKYVMDTYLRIVKYKTAYYSFYLPVACALYMSGEDDKSKFESAERILVQMGTYFQIQ 252

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 253 DDYLDCYG 260


>gi|297790967|ref|XP_002863368.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309203|gb|EFH39627.1| farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 85/235 (36%), Gaps = 26/235 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-------R 74
           DLL   +     +    +   + Y + GGK  R   V +   L                 
Sbjct: 19  DLLHDPSFEFTDESRLWVERMLDYNVRGGKLNRGLSVVDSFKLLKEGKDLTEQEVFLSCA 78

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MDN   RRG+P           AI  G  L  +   I+  
Sbjct: 79  LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRIL-- 134

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +       ++ L + + LQ    GQM+D+   F  E  +          I + KT
Sbjct: 135 -KKHFRGMPYYVDLVDLFNEVELQTAC-GQMIDLITTFEGEKDLSKYSLSIHRRIVQYKT 192

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                        +MA  +      ++    ++GI FQ+ DD LDC  D   L K
Sbjct: 193 AYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGK 247


>gi|223947205|gb|ACN27686.1| unknown [Zea mays]
          Length = 316

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 81/225 (36%), Gaps = 33/225 (14%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTALRVGAAIECIH 83
           M+  +       + Y +LGGK  R   V +   L              A  +G  IE + 
Sbjct: 1   MKFLYLPPFKQMVDYNVLGGKCNRGLSVVDSYKLLKGADALGEEETFLACTLGWCIEWLQ 60

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            + L+ DD+  MD+ + RRG+P           I A +G++     I    +   K    
Sbjct: 61  AFFLVLDDI--MDDSHTRRGQPCWFRVPQVGL-IAANDGIILRN-HISRILRRHFKGKPY 116

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGAL-MCFACE 194
              +L L + +       GQ+LD+      E  +          I + KT          
Sbjct: 117 YADLLDLFNEVE-FKTASGQLLDLITTHEGEKDLTKYNITVHGRIVQYKTAYYSFYLPVA 175

Query: 195 SGAIMAHASQNEKERLRCFG--ENL----GIIFQLADDLLDCEED 233
              +++       E L  +G  EN+    G  FQ+ DD LDC  D
Sbjct: 176 CALLLSG------ENLDNYGDVENILVEMGTYFQVQDDYLDCYGD 214


>gi|163795411|ref|ZP_02189378.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
 gi|159179397|gb|EDP63928.1| geranylgeranyl pyrophosphate synthase [alpha proteobacterium
           BAL199]
          Length = 294

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 93/232 (40%), Gaps = 21/232 (9%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLF 65
           ++L     +++ ++D L         T     L   +R +   GG ++R+ +  +  S  
Sbjct: 15  NELASLLTKVEALIDTLC--------TGEPGSLAGIVRNHFSAGGSRVRARIALQAGSAL 66

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            ++    + + +  E +H  SL+HDDL   D   +RR  P++ + + E  AI AG+ +L+
Sbjct: 67  GLSQTICVALASGCELLHNASLVHDDLQ--DRDGMRRNAPSMWLAHGEAIAICAGDLMLS 124

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ--DEFIDETQVFMIQKM 183
            A+  ++    +    I    +        +  ++ GQ  D++      D      I   
Sbjct: 125 SAYAALAQAGPKAASMITHVHLR-------VAHVISGQCEDLRLGGTCNDPEAYEQIAAA 177

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           K+G L+    E   I A   +              I +Q+ DDL D + D  
Sbjct: 178 KSGPLLALPLELALIAAG-REPLLGAASRAATLFAIAYQMLDDLGDADRDAA 228


>gi|145240169|ref|XP_001392731.1| farnesyltranstransferase [Aspergillus niger CBS 513.88]
 gi|134077245|emb|CAK45586.1| unnamed protein product [Aspergillus niger]
          Length = 389

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 76/207 (36%), Gaps = 16/207 (7%)

Query: 27  TASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                   +   +L    Y L   GK IR  L+        V   +   +   +  +H  
Sbjct: 79  KDGQWSPDNERIVLGPYDYMLQHPGKDIRRQLINAFNVWLKVPPESLSIITKVVAMLHTA 138

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   DN  +RRG P  H  Y     I + N +   A + +         +I  Q
Sbjct: 139 SLLIDDVE--DNSILRRGIPVAHNIYGTAQTINSANYVYFLALQEVQKLNNPAAIDIYVQ 196

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            +L+L    G+        L  +D      E +   +   KTG L   A +     + +S
Sbjct: 197 ELLNLHRGQGM-------DLFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVKLMQAES-SS 248

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
             +   L      +G+IFQ+ DD L+ 
Sbjct: 249 GKDCVSLVNV---MGLIFQICDDYLNL 272


>gi|308197521|gb|ADO17798.1| chrysanthemyl diphosphate synthase [Tanacetum cinerariifolium]
          Length = 395

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 23/250 (9%)

Query: 1   MNGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           +   L S L  +  +  +T+  +L+  ++          +   I Y +  GK +R + V 
Sbjct: 50  LTTTLSSNLDSQFMQVYETLKSELIHDSSFEFDDDSRQWVERMIDYTVPRGKMVRGYSVV 109

Query: 60  ECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +   L     LT         +G   E +  + LIHDD+  MD  + RRG+P        
Sbjct: 110 DSYQLLKGEKLTEDGAFLVCALGWCTEWLQAFLLIHDDI--MDGSHTRRGQPCWFRLPGV 167

Query: 114 VT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              AI  G  L  +   I+   K   K       +L L  N      + GQM+D      
Sbjct: 168 GVVAINDGVLLRNHVHRIL---KKHFKGKAYYVHLLDLF-NETEFQTISGQMIDTIARLA 223

Query: 173 DETQVF--------MIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +  +          I + K+    C+       +M   +  +  +++     LG+ +Q+
Sbjct: 224 GQKDLSKYSMSLNSRIAQYKSSYYSCYLPIACALLMFGENLEDHVQVKDILVELGMYYQI 283

Query: 224 ADDLLDCEED 233
            +D LD   D
Sbjct: 284 QNDYLDTFGD 293


>gi|67623923|ref|XP_668244.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54659431|gb|EAL38008.1| hypothetical protein Chro.70416 [Cryptosporidium hominis]
          Length = 456

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 41/191 (21%)

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +H   +    +I+ IH  SL+HDD+  +DN  IRRGK   +  +     I+ G+ L +
Sbjct: 178 GSDHRMLIH---SIQLIHSASLLHDDI--LDNSEIRRGKKAPYKIFGNKRTILLGDYLFS 232

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG-----GQMLDIQDEFIDE------ 174
                 S     L +NI +   +S+     ++G        G +++  +   D       
Sbjct: 233 K-----SCLNISLIENINAMKCISIIAENLVKGEFSQLNGLGSLIESLNNSKDRKGLVEN 287

Query: 175 --TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL----------RCF--GENLGII 220
              +  +    KT +L  F    G I    S+  K+              +  G N G+ 
Sbjct: 288 YFEKYLLKSYYKTASLFSF----GGIA--CSELLKKAYGNKLRMEMIIYSYYMGLNFGLA 341

Query: 221 FQLADDLLDCE 231
           FQL DD+LD  
Sbjct: 342 FQLMDDILDFT 352


>gi|18313968|ref|NP_560635.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18161541|gb|AAL64817.1| polyprenyl synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 263

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 85/215 (39%), Gaps = 23/215 (10%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN---HLTALR 74
            L  +++      +    + L  A+RY +   GK +R  L+   +   +         ++
Sbjct: 11  ALQHVVVNLQKVGEDLEPESLRKAVRYYIETPGKLLRPILLLTFSYTLDRRALMDPRLIQ 70

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               IE +H  SL+ DD+  MD    RRG  T  + Y +   I+A + L+  +       
Sbjct: 71  AATIIELLHVVSLLQDDV--MDKHEERRGIKTPRVLYGDDRTILASDWLIAESIRRAVKL 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
             ++ + +              Q +  GQ LD+  E           ++KT  L+     
Sbjct: 129 GPEVVEYL----------ADVAQRLSRGQALDLDGER------ERAAELKTAPLIEATLV 172

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             AI+    +   E  +  G +LG+++Q +DD+ D
Sbjct: 173 LPAIILR-RREILELAKKLGRSLGVLYQYSDDISD 206


>gi|209571584|ref|NP_001129294.1| farnesyl pyrophosphate synthase isoform b [Homo sapiens]
 gi|114560091|ref|XP_001160248.1| PREDICTED: farnesyl diphosphate synthase isoform 7 [Pan
           troglodytes]
 gi|114560093|ref|XP_001160446.1| PREDICTED: farnesyl diphosphate synthase isoform 11 [Pan
           troglodytes]
 gi|114560095|ref|XP_001160066.1| PREDICTED: farnesyl diphosphate synthase isoform 3 [Pan
           troglodytes]
 gi|114560097|ref|XP_001160341.1| PREDICTED: farnesyl diphosphate synthase isoform 9 [Pan
           troglodytes]
          Length = 353

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 1   MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 60

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 119 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 174

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 175 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 234

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 235 MGEFFQIQDDYLDLFGD 251


>gi|71042523|pdb|1ZW5|A Chain A, X-Ray Structure Of Farnesyl Diphosphate Synthase Protein
          Length = 355

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 3   MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 62

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 63  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 120

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 121 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 176

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 177 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 236

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 237 MGEFFQIQDDYLDLFGD 253


>gi|158430745|pdb|2RAH|A Chain A, Human Fdps Synthase In Complex With Novel Inhibitor
 gi|160286194|pdb|2VF6|A Chain A, Human Fdps Synthase In Complex With Minodronate
          Length = 378

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 26  MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 85

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 86  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 143

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 144 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 199

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 200 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 259

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 260 MGEFFQIQDDYLDLFGD 276


>gi|66363140|ref|XP_628536.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum
           Iowa II]
 gi|46229548|gb|EAK90366.1| long chain fatty acyl diphosphate synthase [Cryptosporidium parvum
           Iowa II]
          Length = 466

 Score = 96.8 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 31/186 (16%)

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
            ++H   +    +I+ IH  SL+HDD+  +DN  IRRGK   +  +     I+ G+ L +
Sbjct: 178 GLDHRMLIH---SIQLIHSASLLHDDI--LDNSEIRRGKKAPYKIFGNKKTILLGDYLFS 232

Query: 126 YA---FEIISSPKTQLKDNIRSQLML--SLTHNIGLQGMLGGQMLDIQDEFI---DETQV 177
            +     II +       +I ++ ++    +   GL  ++ G       + +      + 
Sbjct: 233 KSCLNISIIENINAMKCISIIAENLVKGEFSQLNGLGSLIEGLNNSKDKKGLVGNYFEKY 292

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERL----------RCF--GENLGIIFQLAD 225
            +    KT +L  F    G I    S+  K+              +  G N G+ FQL D
Sbjct: 293 LLKSYYKTASLFSF----GGIA--CSELLKKAYGNKLRMEMIIYSYYMGLNFGLAFQLMD 346

Query: 226 DLLDCE 231
           D+LD  
Sbjct: 347 DILDFT 352


>gi|160286554|pdb|3B7L|A Chain A, Human Farnesyl Diphosphate Synthase Complexed With Mg And
           Minodronate
          Length = 356

 Score = 96.8 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 4   MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 63

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 64  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 121

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 122 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 177

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 178 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 237

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 238 MGEFFQIQDDYLDLFGD 254


>gi|148749598|gb|ABR09548.1| farnesyl diphosphate synthase isoform [Hevea brasiliensis]
          Length = 342

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 81/228 (35%), Gaps = 21/228 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALR 74
           +LL   A          +   + Y + GGK  R   V +   L              A  
Sbjct: 18  ELLEDPAFEWTPDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKEGQELTEEEIFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD+ + RRG+P           I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRVPKVGL-IAANDGILLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   +       +L L + +       GQ++D+      E  +          I + KT 
Sbjct: 134 KKHFRGKAYYVDLLDLFNEVE-FQTASGQIIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       ++A  + +    ++     +GI FQ+ DD LDC  D
Sbjct: 193 YYSFYLPVACALLIAGENLDNHIVVKDILVQMGIYFQVQDDYLDCFGD 240


>gi|317150896|ref|XP_001823830.2| farnesyltranstransferase [Aspergillus oryzae RIB40]
          Length = 342

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 86/220 (39%), Gaps = 13/220 (5%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTAL 73
           R++  +  + +Q+ +H   +    L   + Y     GK IR+ L+        V +    
Sbjct: 30  RVEESI-QVDIQSTTHTDDEKEKILTGPLDYLRENPGKDIRAKLIDAFNEFLEVPNDKLD 88

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +   I+ +H  SL+ DD+ +  +  +RRG P  H  +     I + N     A   +++
Sbjct: 89  VIKRIIDLLHNASLLIDDIQN--SSTLRRGVPVAHSIFGVAQTINSANYAYFIAQRELTN 146

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
               L  +I ++ ++ L    G+   L  +          E +   +   KTG L   A 
Sbjct: 147 LTNPLSFSIYTEELIHLHRGQGM--ELHWRDTMQCP---SEVEYIEMALDKTGGLFRLAI 201

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                 + +  +    +      LG++FQ+ DD  + + D
Sbjct: 202 RLMQAESASGTDYVPLVET----LGLLFQIRDDYQNLQSD 237


>gi|50552378|ref|XP_503599.1| YALI0E05753p [Yarrowia lipolytica]
 gi|49649468|emb|CAG79180.1| YALI0E05753p [Yarrowia lipolytica]
          Length = 344

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 91/249 (36%), Gaps = 32/249 (12%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            +K +    RI   L  LL      +          +++Y  +GGK  R   V +   L 
Sbjct: 3   KAKFESVFPRISEELVQLLRDEG--LPQDAVQWFSDSLQYNCVGGKLNRGLSVVDTYQLL 60

Query: 66  NV----NHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 +     R+      IE +  + L+ DD+  MD    RRG+P  +++        
Sbjct: 61  TGKKELDDEEYYRLALLGWLIELLQAFFLVSDDI--MDESKTRRGQPCWYLKPK------ 112

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            G   +  AF + S     LK + R +     ++ L H+I  +  L GQ++D+     DE
Sbjct: 113 VGMIAINDAFMLESGIYILLKKHFRQEKYYIDLVELFHDISFKTEL-GQLVDLLTAPEDE 171

Query: 175 TQVFM--------IQKMKTGAL-MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLA 224
             +          I + KT              +A   +  + ++       LG  FQ+ 
Sbjct: 172 VDLNRFSLDKHSFIVRYKTAYYSFYLPVVLAMYVAGITNPKDLQQAMDVLIPLGEYFQVQ 231

Query: 225 DDLLDCEED 233
           DD LD   D
Sbjct: 232 DDYLDNFGD 240


>gi|328869898|gb|EGG18273.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium fasciculatum]
          Length = 300

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 74/212 (34%), Gaps = 17/212 (8%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           +  S   T     LL   +Y     GK +R+ L+        V       V + ++ +H 
Sbjct: 3   KQFSFPLTDKEAVLLEPYKYITETPGKGVRALLIESFNHWLKVEDRVVKEVSSLVQSLHM 62

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+ DD+   DN  +RRG PT H  Y     I   N +   + E            +  
Sbjct: 63  SSLLIDDIE--DNSLLRRGTPTAHTLYGVPQTINCANFVYFLSIEQCMRLGNHQATQVYI 120

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHA 202
           + ++             G  +  +D  I   E +   + K KTG L       G  +   
Sbjct: 121 EELVRSHRG-------QGWDIYWRDNQICPTEDEYKSMVKDKTGGLF----RMGLRVLQC 169

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLD-CEED 233
               K       +NL + +Q+ DD L+    D
Sbjct: 170 FSENKTDYTLLIDNLALYYQIRDDYLNLVSGD 201


>gi|304406152|ref|ZP_07387809.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304344736|gb|EFM10573.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 304

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 12/171 (7%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L      +   +   A    AA+E +     I+DDL   DN  +         Q D   A
Sbjct: 46  LTALHCRMLGGDEQLADAGAAAVELMILALDIYDDLQDKDNPKVP------WSQIDPAIA 99

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           +    GL + + ++I +        +R+   L    N G+   + GQ  D+++E + E +
Sbjct: 100 LNVAIGLQSLSMDLILTVPGPSDRKLRAATYL----NQGVLRAVNGQHTDLRNEPMTEEE 155

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              + + K+G+L+  AC  GA +A  +    E +  +G  +GI  QL +D+
Sbjct: 156 CLQMIEEKSGSLVAAACLVGAALA--TDEHAELIGAYGRAIGIAAQLRNDV 204


>gi|74183868|dbj|BAE24508.1| unnamed protein product [Mus musculus]
          Length = 353

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 84/255 (32%), Gaps = 26/255 (10%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  QE     +    I+  L  +   H +      RL   + Y  LGGK  R
Sbjct: 1   MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYNALGGKYNR 60

Query: 55  SFLVT-ECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V      L       A      L VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  +G  +  +
Sbjct: 119 YQKPGIGL-DAINDALLLEA-SIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLM 176

Query: 168 QDE-------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLG 218
                        E +   I K KT          +   MA    + E          +G
Sbjct: 177 TAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMG 236

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DD LD   D
Sbjct: 237 EFFQVQDDYLDLFGD 251


>gi|6899844|dbj|BAA90525.1| geranylgeranyl diphosphate synthase [Nigrospora sphaerica]
          Length = 392

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 23/198 (11%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A   GK+IRS ++    +   V       +  A+  +H  SL+ DD+   DN  +RRG+P
Sbjct: 113 AASPGKEIRSLMLACFNAWLEVPAQRLEVIKRAVGMLHTASLLIDDIQ--DNSELRRGRP 170

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
             H  +     I + N +   A + +++ +T    +I +  +L          +  GQ +
Sbjct: 171 VAHKIFGPAMTINSANHMYFLALQELNALETPGVVDIFTDELLR---------LHRGQAM 221

Query: 166 DIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D+          E   F +   KTG L   A      +  A       L    E LG++F
Sbjct: 222 DLYWRETLTCPTEADYFEMTSNKTGGLFRLAYR----LMKAESAVSVDLMPVVELLGVLF 277

Query: 222 QLADDLLDC----EEDLP 235
           Q+ADD  +       DL 
Sbjct: 278 QVADDYKNLCSREYGDLK 295


>gi|148688711|gb|EDL20658.1| mCG16244 [Mus musculus]
          Length = 212

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 73/193 (37%), Gaps = 19/193 (9%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   RY L L GK++R+ L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLDPYRYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +R G P  H      + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRHGFPVAHSICGVPSVINSANYVYFLGLEKVLTLDHPDAMKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI-MAHASQNEKERLRCFG 214
                  +  +D +    E +   +   KTG    F    G +  +   ++ K  L    
Sbjct: 129 ------DIYWRDTYTCPTEEEYKAMVLQKTG--GSFGLVVGLMQFSDFKEDLKPLLDT-- 178

Query: 215 ENLGIIFQLADDL 227
             LG+ FQ+ DD 
Sbjct: 179 --LGLFFQIRDDY 189


>gi|19882207|ref|NP_608219.1| farnesyl pyrophosphate synthase [Mus musculus]
 gi|60392303|sp|Q920E5|FPPS_MOUSE RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Cholesterol-regulated 39 kDa
           protein; Short=CR 39; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|15824695|gb|AAL09445.1|AF309508_1 farnesyl pyrophosphate synthase [Mus musculus]
 gi|26353632|dbj|BAC40446.1| unnamed protein product [Mus musculus]
 gi|28913418|gb|AAH48497.1| Farnesyl diphosphate synthetase [Mus musculus]
 gi|71060057|emb|CAJ18572.1| Fdps [Mus musculus]
 gi|74207484|dbj|BAE39995.1| unnamed protein product [Mus musculus]
 gi|148683292|gb|EDL15239.1| mCG17543, isoform CRA_b [Mus musculus]
          Length = 353

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 84/255 (32%), Gaps = 26/255 (10%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  QE     +    I+  L  +   H +      RL   + Y  LGGK  R
Sbjct: 1   MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYNALGGKYNR 60

Query: 55  SFLVT-ECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V      L       A      L VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  +G  +  +
Sbjct: 119 YQKPGIGL-DAINDALLLEA-SIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLM 176

Query: 168 QDE-------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLG 218
                        E +   I K KT          +   MA    + E          +G
Sbjct: 177 TAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMG 236

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DD LD   D
Sbjct: 237 EFFQVQDDYLDLFGD 251


>gi|56789674|gb|AAH87886.1| Farnesyl diphosphate synthetase [Mus musculus]
          Length = 353

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 84/255 (32%), Gaps = 26/255 (10%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  QE     +    I+  L  +   H +      RL   + Y  LGGK  R
Sbjct: 1   MNGNQKLDAYNQEKQNFIQHFSQIVKVLTEKELGHPEIGDAIARLKEVLEYNALGGKYNR 60

Query: 55  SFLVT-ECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V      L       A      L VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  +G  +  +
Sbjct: 119 YQKPGIGL-DAINDALLLEA-SIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLM 176

Query: 168 QDE-------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLG 218
                        E +   I K KT          +   MA    + E          +G
Sbjct: 177 TAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMG 236

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DD LD   D
Sbjct: 237 EFFQVQDDYLDLFGD 251


>gi|126136094|ref|XP_001384571.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces
           stipitis CBS 6054]
 gi|126091769|gb|ABN66542.1| arnesyl diphosphate synthetase (FPP synthetase) [Scheffersomyces
           stipitis CBS 6054]
          Length = 350

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 25/237 (10%)

Query: 16  IDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---------SLF 65
            D ++++L      + M  +  D  +  + Y   GGK  R   V +            L 
Sbjct: 14  FDQLVEELKEVLVGYNMPQEAVDWFVKNLDYNTPGGKLNRGLSVVDTYCILNKTTAVELD 73

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
           +  +     +G AIE +  Y L+ DD+  MD    RRG+P  ++        I  + +L 
Sbjct: 74  DEKYAKVALLGWAIELLQAYFLVADDM--MDQSKTRRGQPCWYLAEGVGNIAINDSFMLE 131

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFI------DETQV 177
            A  ++   K   +++     +L L H +  +  L GQ+LD    DE++         + 
Sbjct: 132 GAIYVL--LKKHFRNDSYYVDLLDLFHEVTFKTEL-GQLLDLVTADEYVVDLDKFSLDKH 188

Query: 178 FMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             I   KT     +   + A+      S  + ++++     LG  FQ+ DD LDC  
Sbjct: 189 SFIVIFKTAYYSFYLPVALAMYMSGINSAEDLKQVQDILIPLGEYFQIQDDFLDCFG 245


>gi|312087949|ref|XP_003145671.1| geranylgeranyl pyrophosphate synthetase [Loa loa]
 gi|307759165|gb|EFO18399.1| geranylgeranyl pyrophosphate synthetase [Loa loa]
          Length = 306

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 73/194 (37%), Gaps = 12/194 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +LL+  +Y L L GK++RS L     S   V+      +   +E +H  SL+ DD+   D
Sbjct: 7   QLLAPYQYILKLPGKQLRSQLAKAFNSWLQVDVEVLDSIMTVVEMLHNASLMIDDIE--D 64

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG P  H  Y     I   N +   A              I ++ +L L    G 
Sbjct: 65  SSLLRRGLPVTHSIYGIPRTINTANYVYFAALSRCILLGKFEAVKIFTEQLLELHRGQG- 123

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + +     +        E +   +   KTG L     +   +      + K  +R     
Sbjct: 124 KELYWRDTVQCP----TEEEYEQMAMQKTGGLFALTIQLMELFGKKQYDFKSLIRNLA-- 177

Query: 217 LGIIFQLADDLLDC 230
             + FQ+ DD ++ 
Sbjct: 178 --VYFQIRDDYINL 189


>gi|119483962|ref|XP_001261884.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya
           fischeri NRRL 181]
 gi|119410040|gb|EAW19987.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Neosartorya
           fischeri NRRL 181]
          Length = 357

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 77/203 (37%), Gaps = 16/203 (7%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
               + + + Y     GK IR  L++       +       +   +  +H  SL+ DD+ 
Sbjct: 67  EEKIIWAPLDYLCSFPGKDIRGKLISAFNQWLQIPEDKLDVIKRVVGLLHSASLLIDDIQ 126

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+  +RRG P  H  +     I + N    +A + +          I ++ ML L   
Sbjct: 127 --DSSKLRRGFPVAHSIFGIAQTINSANFAYFWAQQELKKLGKPEAMVIFTEEMLRLHRG 184

Query: 154 IGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            GL        L  +D      E +   +   KTG L   A +   + +  +++    + 
Sbjct: 185 QGL-------DLYWRDSLTCPTEEEYLEMVANKTGGLFRLAIKLMQMESQNTKDCVPLVD 237

Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
                LGIIFQ+ DD  + + DL
Sbjct: 238 ----LLGIIFQIRDDYQNLQSDL 256


>gi|39974191|ref|XP_368486.1| hypothetical protein MGG_00758 [Magnaporthe oryzae 70-15]
 gi|145018310|gb|EDK02589.1| hypothetical protein MGG_00758 [Magnaporthe oryzae 70-15]
          Length = 412

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 68/186 (36%), Gaps = 17/186 (9%)

Query: 46  ALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            LLG  GK  R+ ++    +   V   +   +   +  +H  SL+ DD+   DN  +RRG
Sbjct: 132 YLLGQPGKDFRTQIIMAFNAWLEVPSESLELITHVVGMLHTASLLVDDVE--DNSSLRRG 189

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            P  H  +     I + N +   A + +         +I ++ ++ L    G+       
Sbjct: 190 LPVAHSIFGVPQTINSANYIYFAALQELKKLSNPEAVSIFAEELIHLHRGQGM------- 242

Query: 164 MLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            L  +D      E     +   KTG L       G  +  A              +G+IF
Sbjct: 243 DLFWRDTLTCPTEDDYLEMVGNKTGGLF----RLGIKLMQAESAFPTDCIPLANLIGLIF 298

Query: 222 QLADDL 227
           Q+ DD 
Sbjct: 299 QIRDDY 304


>gi|167045407|gb|ABZ10062.1| hypothetical protein ALOHA_HF4000APKG10F15ctg4g8 [uncultured marine
           crenarchaeote HF4000_APKG10F15]
          Length = 100

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 9/106 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
            K     K+I+ +LD       S ++          ++YAL GGK+IR  ++   +    
Sbjct: 3   EKYSAYIKKINNVLD-------SELELYTESEFKEPLKYALGGGKRIRPIILLLASECVG 55

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                      AIE +H  S+IHDD+  +DN  IRR K   HI+Y 
Sbjct: 56  EIDDNTFAAACAIEFLHTESVIHDDI--IDNETIRRQKDPFHIKYG 99


>gi|111305075|gb|AAI20219.1| FDPS protein [Bos taurus]
          Length = 376

 Score = 96.4 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 86/247 (34%), Gaps = 20/247 (8%)

Query: 5   LPSKLQENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSF-LVT 59
           L +  QE     +    I+  L  +   H +      RL   + Y  +GGK  R   +V 
Sbjct: 30  LDAYAQERQDFIQHFSQIVKVLTEEDIGHPEIGDAITRLKEVLEYNAIGGKYNRGLTVVI 89

Query: 60  ECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
               L         +   AL VG  +E +  + L+ DD+  MD+   RRG+   + +   
Sbjct: 90  TFRELVEPGKQDPDSLQRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQTCWYQKPGI 147

Query: 114 VT-AIIAGNGLLTYAFEII---SSPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQ 168
              AI     L +  + ++      +    D I   L  S    IG    ++     ++ 
Sbjct: 148 GLDAINDAFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQGNVD 207

Query: 169 DEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADD 226
                E +   I K KT          +   MA    + E    +     +G  FQ+ DD
Sbjct: 208 LGRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHAHAKKILLEMGEFFQIQDD 267

Query: 227 LLDCEED 233
            LD   D
Sbjct: 268 YLDLFGD 274


>gi|224156665|ref|XP_002200183.1| PREDICTED: farnesyl diphosphate synthase (farnesyl pyrophosphate
           synthetase, dimethylallyltranstransferase,
           geranyltranstransferase) [Taeniopygia guttata]
          Length = 366

 Score = 96.0 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 85/268 (31%), Gaps = 39/268 (14%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSFLVT 59
           MNG   ++  E +     I+ DL      H +      RL   + Y   GGK  R   V 
Sbjct: 1   MNGA-AAERDEFAAFFPQIVRDLTEDMLGHPEVGDAVARLKQVLEYNAPGGKCNRGLTVV 59

Query: 60  ECASLFNVNHLT-----ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
                            AL VG  IE    + L+ DD+  MD    RRG+   + +    
Sbjct: 60  AAFRRLAERQEPESLRCALAVGWCIELFQAFFLVADDI--MDASLTRRGQLCWYKKEGIG 117

Query: 115 T-AIIAG--------------------------NGLLTYAFEIISSPKTQLKDNIRSQLM 147
             AI                               L   AF +++          R QL 
Sbjct: 118 LDAINDAFLLESSVYRLLRRYCGQQPYYLHLLELFLQFQAFFLVADDIMDASLTRRGQLC 177

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAH-ASQN 205
                 IGL  +    +L+    +    +   I K KT          +   MA   S+ 
Sbjct: 178 WYKKEGIGLDAINDAFLLES-SVYRLLRRYKAIVKYKTAFYSFYLPVAAAMYMAGIDSKE 236

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
           E E  +     +G  FQ+ DD LDC  D
Sbjct: 237 EHENAKAILLEMGEFFQIQDDFLDCYGD 264


>gi|121701357|ref|XP_001268943.1| geranylgeranyl diphosphate synthase [Aspergillus clavatus NRRL 1]
 gi|119397086|gb|EAW07517.1| geranylgeranyl diphosphate synthase [Aspergillus clavatus NRRL 1]
          Length = 372

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 76/205 (37%), Gaps = 16/205 (7%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              ++   L+    Y     GK IR  L+        V   +   +   +  +H  SL+ 
Sbjct: 60  WSQEYEKILMGPYDYMQQHPGKDIRRQLINAFNVWLQVPPDSLAIITKVVGMLHTASLLI 119

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   DN  +RRG P  H  +     I + N +   A + +         +I  Q +L+
Sbjct: 120 DDVE--DNSVLRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIYVQELLN 177

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+        L  +D      E +   +   KTG L   A +     + A ++  
Sbjct: 178 LHRGQGM-------DLFWRDTLTCPTEEEYLEMVGNKTGGLFRLAIKLMQAESTAGKDCV 230

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
            +L      +G+ FQ+ DD L+   
Sbjct: 231 -KLVNV---MGLTFQICDDYLNLSS 251


>gi|302812450|ref|XP_002987912.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii]
 gi|300144301|gb|EFJ10986.1| hypothetical protein SELMODRAFT_127038 [Selaginella moellendorffii]
          Length = 374

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 84/243 (34%), Gaps = 21/243 (8%)

Query: 7   SKLQENSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSF-----LVTE 60
           S   +     D I  +LL    A     +  + +   + Y + GGK  R       LV  
Sbjct: 33  SFRDKFVAAFDKIKKELLADCDAFQFTRESREWVSKMLDYNVPGGKLNRGLSVIDSLVLL 92

Query: 61  CAS--LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            +   L       A  +G  IE +  Y L+ DD+  MD+ + RRGKP+   +   V  + 
Sbjct: 93  KSEDELSRDEIEQAFALGWCIEWLQAYFLVMDDI--MDDSHTRRGKPS-WFKQPNVGLVA 149

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE-- 174
           A + LL     +    +      +    +  L   +  Q   G  +  I      +D   
Sbjct: 150 ANDALLLRN-HVPRILRKYFHGQLYYFDLRELFDEVEYQTACGQMLDLITSPAGKVDLSK 208

Query: 175 ---TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLD 229
                   I K KT              M+  S N K E  +     +G  FQ+ DD LD
Sbjct: 209 YVMETYLRIVKFKTAFYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLD 268

Query: 230 CEE 232
           C  
Sbjct: 269 CYG 271


>gi|154317914|ref|XP_001558276.1| hypothetical protein BC1G_02940 [Botryotinia fuckeliana B05.10]
 gi|77540231|gb|ABA86970.1| farnesyl diphosphate synthase [Botryotinia fuckeliana]
 gi|150843598|gb|EDN18791.1| hypothetical protein BC1G_02940 [Botryotinia fuckeliana B05.10]
          Length = 347

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 22/244 (9%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLV------ 58
            + L+E       ++DDLL     + +  Q  D L +++    +GGK  R   V      
Sbjct: 4   ATTLKEFESVFPKLVDDLLAHAQKYNLPQQGQDWLKASLNANTIGGKCNRGMSVPDSVSL 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
              A L    +  +  +G   E +  + L+ DD+  MD+   RRG+P  + Q      I 
Sbjct: 64  LLEAPLSEEQYFESATLGWMTELLQAFFLVSDDI--MDSSITRRGQPCWYRQPGVGM-IA 120

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--------IQDE 170
             +  L  A  I S  K   + +     ++ L H +  Q  L GQ+ D        +  +
Sbjct: 121 INDAFLLEA-AIYSLLKKYFRSHPSYLDLIELFHEVTYQTEL-GQLCDLLTAPEDKVDLD 178

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLADDLL 228
               T+   I   KT     +   + A+     A+    +++      LG  FQ+ DD L
Sbjct: 179 NFSMTKYDFIVTYKTAYYSFYLPVALALHHQKIATPKNLKQVEDILIPLGQYFQIQDDYL 238

Query: 229 DCEE 232
           D   
Sbjct: 239 DNFG 242


>gi|289740703|gb|ADD19099.1| farnesyl pyrophosphate synthase [Glossina morsitans morsitans]
          Length = 425

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 86/230 (37%), Gaps = 23/230 (10%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-LFNVNHLTALRVG 76
            I+ DL      +     +  L   + Y +L GKK R+ L       L        L++ 
Sbjct: 101 DIIRDLTEHADKYNSKDASTWLKKVLEYNILHGKKFRALLTILTYKNLVKDVTAENLKLA 160

Query: 77  ----AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEI 130
                 +E + C+ +++DD+  MDN   RRG+ T   + D V  I   + ++  +  + +
Sbjct: 161 QILGWCLELLQCFLVLNDDI--MDNSTTRRGQ-TCWHRLDNVGLIAFNDSIMVESGIYVL 217

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM-----IQKMKT 185
           +    + L   +    M      I       GQ LD+ +     +   M     I   KT
Sbjct: 218 LKKYFSHLDCYVDLMHMFHEMTFITTC----GQSLDMLNSNKSVSTFTMNTHKAIAANKT 273

Query: 186 GALMCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
            +   F     A M  A   + E LR        +G  FQ+ DD LDC  
Sbjct: 274 -SHYTFYFPIAAAMHLAGLKDAEALRQTKMIAMEIGHFFQVQDDFLDCFG 322


>gi|315604555|ref|ZP_07879618.1| polyprenyl synthetase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313567|gb|EFU61621.1| polyprenyl synthetase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 367

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 78/231 (33%), Gaps = 38/231 (16%)

Query: 37  DRLLSAIRYALLGGKKIRSFL-----VTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           +    A+  A  GGK+ R+ +                 L  L     +E     +L+HDD
Sbjct: 36  EEFTQAVLSAASGGKRFRALMAHVGYCLGAGLALGEVFLPHLSAA--LELYQASALVHDD 93

Query: 92  LPSMDNGYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYAFE------ 129
           +  +D    RRG PT H                  + E  AI+ G+ L + A +      
Sbjct: 94  I--IDRANERRGAPTPHRLLADHHGRRRWMGSPTDFGEHAAILVGDFLFSAATDAADAQA 151

Query: 130 -IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFMIQKMKTG- 186
            ++     Q      + +   +     L  +     LD  +D+ +       +   K+  
Sbjct: 152 LLLDEAAAQSFTRRFADMHAEVALGQYLDIVAEQTPLDPHRDDAVSGADALDVALHKSAH 211

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENL----GIIFQLADDLLDCEED 233
             +      GAI A A   +   L    +++    G+ FQL DD L    D
Sbjct: 212 YSVVHPAALGAICASAPPGQVSTLLAILDSVLTPWGLAFQLRDDDLGVFGD 262


>gi|2935459|gb|AAC73051.1| farnesyl pyrophosphate synthase [Solanum lycopersicum]
          Length = 342

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 26/235 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-------TALR 74
           DLL  TA          +   + Y + GGK  R   V +  SL              A  
Sbjct: 18  DLLEDTAFEFTDDSRKWVDKMLDYNVPGGKLNRGLSVIDSLSLLKDGKELTADEIFKASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MD  + RRG+P  +        AI  G  L  +   I+  
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWYNLEKVGMIAINDGILLRNHITRIL-- 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +       +L L + +       GQM+D+    + E  +          I + KT
Sbjct: 134 -KKYFRPESYYVDLLDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                        +M   + ++   ++    ++GI FQ+ DD LDC  D   L K
Sbjct: 192 AYYSFYLPVACALLMVGENLDKHVDVKKILIDMGIYFQVQDDYLDCFADPEVLGK 246


>gi|302819273|ref|XP_002991307.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii]
 gi|300140887|gb|EFJ07605.1| hypothetical protein SELMODRAFT_236261 [Selaginella moellendorffii]
          Length = 343

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 82/242 (33%), Gaps = 19/242 (7%)

Query: 7   SKLQENSKRIDTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSF-----LVTE 60
           + L+     +DT   +LL    A     +  + +   + Y + GGK  R       LV  
Sbjct: 2   ADLKSMEVSVDTTDKELLADCDAFQFTRESREWVSKMLDYNVPGGKLNRGLSVIDSLVLL 61

Query: 61  CAS--LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
            +   L       A  +G  IE +  Y L+ DD+  MDN + RRGKP+   +   V  + 
Sbjct: 62  KSEDELSRDEIEQAFALGWCIEWLQAYFLVMDDI--MDNSHTRRGKPS-WFKQPNVGLVA 118

Query: 119 AGNGLLTYAF--EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----I 172
           A + LL       I+             + +          G +   +     +      
Sbjct: 119 ANDALLLRNHVPRILRKYFHGQPYYFDLRELFDEVEYQTACGQMLDLITSPAGKVDLSKY 178

Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDC 230
                  I K KT              M+  S N K E  +     +G  FQ+ DD LDC
Sbjct: 179 VMETYLRIVKFKTAFYSFYLPVACALYMSGESDNSKFESAKQILLQMGTYFQIQDDFLDC 238

Query: 231 EE 232
             
Sbjct: 239 YG 240


>gi|90078142|dbj|BAE88751.1| unnamed protein product [Macaca fascicularis]
          Length = 353

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +T     RL   + Y  +GGK  R
Sbjct: 1   MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 60

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVTDDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI     L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 119 YQKPGVGLDAINDAILLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 174

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 175 LITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 234

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 235 MGEFFQIQDDYLDLFGD 251


>gi|255943955|ref|XP_002562745.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587480|emb|CAP85515.1| Pc20g01860 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 372

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 16/206 (7%)

Query: 30  HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            +   +   + + + Y L + GK IR  L++      ++       V   I+ +H  SL+
Sbjct: 69  QITEPYEKIVSAPLEYLLCIPGKDIRGKLISAFNEWLHLPDDKLAIVKEVIDRLHTASLL 128

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
            DD+   D   +RRG P  H  +     I A N       + ++        +I +Q +L
Sbjct: 129 IDDIQ--DASRLRRGHPVAHDVFGVAQTINAANYAYFLQQKRLNEINDPRAFHIFTQALL 186

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
                     +  G  L  +D  +   E +   +   KTG L   A E   I    S   
Sbjct: 187 D-------LHIGQGMDLYWRDALVCPTEAEYTRMVMYKTGGLFRLAVELMQI---QSTTT 236

Query: 207 KERLRCFGENLGIIFQLADDLLDCEE 232
            +  R  G  LGIIFQ+ DD ++ + 
Sbjct: 237 TDLSRLVGL-LGIIFQIRDDYMNLQS 261


>gi|112983458|ref|NP_001036889.1| farnesyl pyrophosphate syntase [Bombyx mori]
 gi|15991313|dbj|BAB69490.1| farnesyl pyrophosphate syntase [Bombyx mori]
          Length = 427

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 82/245 (33%), Gaps = 26/245 (10%)

Query: 10  QENSKRIDTILDDL---LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLF 65
           ++ S+    +  D+   L +T  H+      + L   ++Y +  GKK R         + 
Sbjct: 86  KDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKML 145

Query: 66  ----NVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               N+     L     G  +E  H + L+ +D+  M+   +RRG P  H + D     I
Sbjct: 146 EKKENLTPENILLANVMGWCVEMFHTHQLLLNDI--MEGTTMRRGVPCWHRRPDVGLNGI 203

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
               L+  A  + +S K           +L  T N  L     G  +       D     
Sbjct: 204 NDAALIQSA--MYTSLKRHFNTKPYYNYVLE-TFNEMLMKCSMGHYVQKLMLKTDKPDLS 260

Query: 174 ---ETQVFMIQKMKT-GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLL 228
                +   I K KT             +M          + +     +G  FQ+ DD L
Sbjct: 261 LFTMEKYEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFL 320

Query: 229 DCEED 233
           DC  D
Sbjct: 321 DCFGD 325


>gi|170574826|ref|XP_001892983.1| geranylgeranyl pyrophosphate synthetase [Brugia malayi]
 gi|158601230|gb|EDP38192.1| geranylgeranyl pyrophosphate synthetase, putative [Brugia malayi]
          Length = 306

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 12/194 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +LL+  +Y L L GK++RS L         V+      +   +E +H  SL+ DD+   D
Sbjct: 7   QLLAPYQYILKLPGKQLRSQLAKAFNFWLQVDVEVLDSIMTVVEMLHNASLMIDDIE--D 64

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           +  +RRG P  H  Y     I   N +   A              I ++ +L L    G 
Sbjct: 65  SSLLRRGLPVTHSIYGIARTINTANYVYFAALSRCILLGKFEAVEIFTEQLLELHRGQG- 123

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           + +    ++        E +   +   KTG L     +   +      + K  +    +N
Sbjct: 124 KELYWRDIVQCP----TEEEYEQMAMQKTGGLFALTVQLMELFGKKQYDFKSLI----KN 175

Query: 217 LGIIFQLADDLLDC 230
           L I FQ+ DD ++ 
Sbjct: 176 LAIYFQIRDDYINL 189


>gi|114560101|ref|XP_001160023.1| PREDICTED: farnesyl diphosphate synthase isoform 2 [Pan
           troglodytes]
          Length = 354

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 90/258 (34%), Gaps = 31/258 (12%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 1   MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 60

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 119 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 174

Query: 167 IQDE--------FIDETQVFMIQKMKTGALMCFACESGAIMAHAS---QNEKERLRCFGE 215
           +              E +   I K KT     +   + A+   A    + E    +    
Sbjct: 175 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAAGIDGEKEHANAKKILL 234

Query: 216 NLGIIFQLADDLLDCEED 233
            +G  FQ+ DD LD   D
Sbjct: 235 EMGEFFQIQDDYLDLFGD 252


>gi|94502447|ref|ZP_01308879.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|94450996|gb|EAT13989.1| polyprenyl synthetase ispB [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
          Length = 137

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR   V     +          +   IE IH  SLIHDD+  +D    RRG  +++ 
Sbjct: 51  GKYIRPIFVFLITKMLGNISKKTYDLAILIELIHTASLIHDDV--IDFSNTRRGFLSINA 108

Query: 110 QYDEVTAIIAGNGLLTYAFEI 130
            +   TA++ G+ + + +F+I
Sbjct: 109 IWQNKTALVFGDYIFSKSFDI 129


>gi|203582|gb|AAA40960.1| cholesterol-regulated protein CR39 [Rattus norvegicus]
          Length = 344

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 86/256 (33%), Gaps = 28/256 (10%)

Query: 1   MNGGLPSKL--QENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG     +  QE     +    I+  L      H +      R+   + Y  +GGK  R
Sbjct: 1   MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 60

Query: 55  SFLVTECA-SLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V +    L       A      L VG  +E +  + L+ DD+  MD+ Y RRG+   
Sbjct: 61  GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDI--MDSSYTRRGQICW 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  + GQ LD+
Sbjct: 119 YQKPGIGL-DAINDALLLEA-AIYRLLKFYCREQPYYLNLLELFLQSSYQTEI-GQTLDL 175

Query: 168 QDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
                         E +   I K KT          +   MA    + E          +
Sbjct: 176 ITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEM 235

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ DD LD   D
Sbjct: 236 GEFFQIQDDYLDLFGD 251


>gi|310792814|gb|EFQ28275.1| polyprenyl synthetase [Glomerella graminicola M1.001]
          Length = 433

 Score = 95.6 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 73/212 (34%), Gaps = 16/212 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECI 82
           L  T      +    +     Y + L GK  RS L+        V   +   +   +  +
Sbjct: 127 LNFTRKTWPEEKEKVIAGPFDYLSALPGKDFRSQLIQAFNVWLEVPQESIDVITNVVGML 186

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +   K      I
Sbjct: 187 HTASLLIDDVE--DSSSLRRGLPVAHNIFGVAQTINSANYIYFRALQEVQRLKNPKAITI 244

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMA 200
            ++ ++ L    G+        L  +D      E     +   KTG L       G  + 
Sbjct: 245 FAEELVHLHRGQGM-------DLFWRDTLTCPTEEDYLEMVGNKTGGLF----RLGIKLM 293

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A              +G+IFQ+ DD ++   
Sbjct: 294 QAESRSLTDCVELVNLMGLIFQIRDDYMNLSS 325


>gi|240171554|ref|ZP_04750213.1| geranylgeranyl pyrophosphate synthase CrtE [Mycobacterium kansasii
           ATCC 12478]
          Length = 370

 Score = 95.6 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 26/203 (12%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK +RS  +             AL   A++E +H ++L+ DD+  MD    RRG P VH+
Sbjct: 67  GKCLRSTFMYLGWLCGAAPSRAALSAAASLELLHAFALLQDDV--MDRSSQRRGSPAVHV 124

Query: 110 ----------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
                           ++ E  AI+ G+  L +A +++           R    L   ++
Sbjct: 125 QLAEWYRLRGLSGPAGRFGESAAILLGDVCLIWAEQMLRESGV----EARRLQQLWPRYD 180

Query: 154 IGLQGMLGGQMLDIQDEFID---ETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER 209
                +  GQ  D+ ++  D      V  I + K+G   +    E GA MA        +
Sbjct: 181 AMRIELAVGQFADLANDIRDRPSLRTVLDIARRKSGNYTVRRPLEMGAAMADCDDRTLTQ 240

Query: 210 LRCFGENLGIIFQLADDLLDCEE 232
           L  +G ++G  FQL DDLL    
Sbjct: 241 LGLYGADVGEAFQLRDDLLGVFG 263


>gi|327292126|ref|XP_003230771.1| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like, partial
           [Anolis carolinensis]
          Length = 137

 Score = 95.6 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 8/121 (6%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +    E IH  SL+HDD+  +D+   RRGK TV+  + E  A++AG+ +L  A + ++  
Sbjct: 25  IALIAEMIHTASLVHDDV--IDDANSRRGKLTVNHVWGERKAVLAGDFILAVASQTLARI 82

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
                 ++ ++ +  L     L      Q+   ++E             KT +L+  +C+
Sbjct: 83  GNTTIVSVLTRAIEDLVRGEFL------QLGSKENENERFAHYLEKTFKKTASLIAHSCK 136

Query: 195 S 195
           +
Sbjct: 137 A 137


>gi|213965295|ref|ZP_03393492.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum
           SK46]
 gi|213952147|gb|EEB63532.1| geranylgeranyl pyrophosphate synthase [Corynebacterium amycolatum
           SK46]
          Length = 370

 Score = 95.6 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 38/256 (14%)

Query: 10  QENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV----TECA 62
           +E    +   L++ L       + +   + + + S   + L GGK++R            
Sbjct: 13  REVPAAVTKTLENYLKSRGDDVASVDAVYTEAIDSLHSFVLNGGKRVRPAFAWQGWLGAG 72

Query: 63  SLFN-----VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI-------- 109
            L        +    +   +A+E I   +LI      +D+   RRG PT+H         
Sbjct: 73  GLEGRFSPAEDSPAVMNAVSALELIQACALI--HDDIIDDADTRRGAPTIHKVFEAKHEA 130

Query: 110 --------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
                   ++    AI+ G+  LT+A +++ S     +   R+ +            +LG
Sbjct: 131 NSWNGAADRFGISAAILIGDVALTWADDMMHSSGLSSEALTRALVPWRAMRT----EVLG 186

Query: 162 GQMLDIQDEFIDETQVFMIQKM---KTGA-LMCFACESGAIMAHASQNEKERLRCFGENL 217
           GQ+LDI  E   +++V   +K+   KT A  +      GA +A A     E  R FG ++
Sbjct: 187 GQLLDITAEASRDSRVETAEKINLFKTAAYTIERPLHIGAAIAGAPAELVEAYRSFGRDI 246

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQL DD L    D
Sbjct: 247 GVAFQLRDDQLGVFGD 262


>gi|3549881|emb|CAA75568.1| geranylgeranyl diphosphate synthase [Gibberella fujikuroi]
          Length = 342

 Score = 95.6 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 9/182 (4%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR   +        V       +   I  +H  SLI DD    DN  +RRGKP+ H  
Sbjct: 109 KGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLHNSSLIIDD--FQDNSPLRRGKPSTHTV 166

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +    AI     ++  A E I            +  + ++       G            
Sbjct: 167 FGPAQAINTATYVIVKAIEKIQDIVGHDALADVTGTITTIFQ-----GQAMDLWWTANAI 221

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLL 228
                +  ++   KTGAL   + E  A+ + A  S +  E L      LG  FQ+ DD +
Sbjct: 222 VPSIQEYLLMVNDKTGALFRLSLELLALNSEASISDSALESLSSAVSLLGQYFQIRDDYM 281

Query: 229 DC 230
           + 
Sbjct: 282 NL 283


>gi|302913154|ref|XP_003050856.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731794|gb|EEU45143.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 419

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 16/215 (7%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DL               +     Y +   GK  R+ L+    +  +V   +   +   +
Sbjct: 115 EDLNFTAKRTWTDDKEQVVRGPYDYVISHPGKDFRAQLINAFNAWLDVPQESLDVITRVV 174

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +        
Sbjct: 175 GMLHESSLLIDDVQ--DSSELRRGFPVAHNIFGVAQTINSANYIYFIALQELHRLNNPDL 232

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
             + S+ +++L    G+        L  +D      E     +   KTG L     +  A
Sbjct: 233 ITVFSEELVNLHRGQGM-------DLFWRDTLTCPTEEDYLEMVGNKTGGLFRLGIKLMA 285

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +    +    +      +G+IFQ+ DD ++   
Sbjct: 286 AESSVPTDCVPLV----NLIGLIFQIRDDYMNLSS 316


>gi|46137163|ref|XP_390273.1| GGPP_GIBFU Geranylgeranyl pyrophosphate synthetase (GGPP
           synthetase) (GGPPSASE) (Geranylgeranyl diphosphate
           synthase) [Gibberella zeae PH-1]
          Length = 416

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 76/215 (35%), Gaps = 16/215 (7%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DL               +     Y +   GK  R+ L+    +  +V   +   +   +
Sbjct: 112 EDLEFTAKRSWNGDKESVVRGPYDYVISHPGKDFRAQLIAAFNAWLDVPAPSLEVITRVV 171

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +        
Sbjct: 172 GMLHESSLLIDDVQ--DSSELRRGFPVAHNIFGVAQTINSANYIYFVALQELHKLGNPEL 229

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
             I S  +++L    G+        L  +D      E     +   KTG L     +  A
Sbjct: 230 ITIFSDELVNLHRGQGM-------DLFWRDTLTCPTEEDYLEMVGNKTGGLFRLGIKLMA 282

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A+   +    +      +G+IFQ+ DD ++   
Sbjct: 283 EEANGPTDCVPLV----NLIGLIFQIRDDYMNLSS 313


>gi|326508604|dbj|BAJ95824.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 350

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 91/238 (38%), Gaps = 31/238 (13%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF------LVTECASLFNVNHLTA 72
           +L+D+  ++   +  ++   +   + Y +  GK  R        L+     +   +   A
Sbjct: 19  VLEDI--KSNYEVPEENIKYVERILEYNVPHGKLNRGLAVVDTLLILNNYQISQEDFKLA 76

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +G  IE +  + LI DD+  MD    RRG+P  + ++++V      + LL  + +I  
Sbjct: 77  SVLGWCIEFLQAFFLIADDI--MDASVTRRGQPCWY-KWNDVKMTACNDYLLVES-QIYI 132

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---------------EFIDETQV 177
             K    +++   L+        +  +  GQ+ D++                        
Sbjct: 133 ILKKYFNNDLYVPLVELFHQVSYMTEL--GQLHDLRSLPPNVDKNSSDEIPFHTFTIETY 190

Query: 178 FMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +I K KT           G I++    +N +++       +G  FQ+ DD LDC  D
Sbjct: 191 SLIVKYKTAFYSFYLPLYCGLILSGKLDENIRKQTLDISIAMGEYFQIQDDYLDCYGD 248


>gi|4894899|gb|AAD32648.1| farnesyl diphosphate synthase [Artemisia annua]
          Length = 343

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 90/248 (36%), Gaps = 24/248 (9%)

Query: 1   MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           M+   L SK     K  DT+  +L+   A          +   + Y + GGK  R   V 
Sbjct: 1   MSSIDLKSKF---LKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVV 57

Query: 60  ECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +   L     L+      +  +G  IE +  Y L+ DD+  MD  + RRG+P        
Sbjct: 58  DSYQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPCWFRLLKV 115

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
              I A +G+L     +    K   +       ++ L  N G+     GQM+D+    + 
Sbjct: 116 GM-IAANDGILLRN-HVPRILKKHFRGKPYYVDLVDLF-NEGVIQTASGQMIDLIPTLVG 172

Query: 174 ETQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E  +          I + KT             +M     ++   ++     +G  FQ+ 
Sbjct: 173 EKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQ 232

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 233 DDYLDCFG 240


>gi|125810640|ref|XP_001361556.1| GA11601 [Drosophila pseudoobscura pseudoobscura]
 gi|195153687|ref|XP_002017755.1| GL17346 [Drosophila persimilis]
 gi|54636732|gb|EAL26135.1| GA11601 [Drosophila pseudoobscura pseudoobscura]
 gi|194113551|gb|EDW35594.1| GL17346 [Drosophila persimilis]
          Length = 419

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 75/227 (33%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ D+   T ++            ++Y +  GKK R  L             L   N  
Sbjct: 93  DLVRDITTVTKTYNCNDAAKWFAKVLQYNVPRGKKNRGILTVLTYKNLVPAEDLTPENIK 152

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+P  H   +   TAI     +    + 
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYA 210

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGAL 188
           I+    + L   +    +      I   G    Q+   +            I   KT   
Sbjct: 211 ILKMHFSHLDCYVALMELFHEITYITTCGQSLDQLNSHRSVSEFTMENYKAIVDNKTAY- 269

Query: 189 MCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
             F       +  A   + E  R        +G  FQ+ DD LDC  
Sbjct: 270 YSFYLPFAVALHLAGYKDAEAFRQSKTILLEMGHFFQVQDDFLDCFG 316


>gi|19114211|ref|NP_593299.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe 972h-]
 gi|3287843|sp|O14230|FPPS_SCHPO RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|2330860|emb|CAB11097.1| geranyltranstransferase Fps1 [Schizosaccharomyces pombe]
          Length = 347

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 32/247 (12%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQH-NDRLLS----AIRYALLGGKKIRSFLVTECASLF 65
           +   + ++ L   + +  ++++T +  D +      ++ +  LGGK  R   V +   + 
Sbjct: 5   DKRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEIL 64

Query: 66  NV---NHLTALRVGA---AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                +    ++       +E +  + LI DD+  MD    RRG+P  ++          
Sbjct: 65  LGHPLDEAAYMKAAVLGWMVELLQSFFLIADDI--MDASKTRRGQPCWYLMPG------V 116

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQM--LDIQDEFID 173
           GN  +  AF + S+    LK + R +     ++ L H++  Q  LG Q+  L   ++ +D
Sbjct: 117 GNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVD 176

Query: 174 ETQ-----VFMIQKMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADD 226
            ++        I   KT              +A  A+    +  +     LG  FQ+ DD
Sbjct: 177 LSKFSLQKHSFIVIYKTAFYSFYLPVALAMHLAGVATPENLKCAQDILIILGKYFQVQDD 236

Query: 227 LLDCEED 233
            LDC  D
Sbjct: 237 YLDCYGD 243


>gi|328717612|ref|XP_001950423.2| PREDICTED: farnesyl pyrophosphate synthase-like [Acyrthosiphon
           pisum]
          Length = 396

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 86/234 (36%), Gaps = 25/234 (10%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR--- 74
            ++ DL   +         + L + ++Y + GGK  R   +     + +           
Sbjct: 66  ELVKDLTDTSLKLNVPDATEWLENLLKYNVPGGKNNRGLTLVTSFKMLSTPSDLTYENLR 125

Query: 75  ----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
               +G  +E +  Y L+ DD+  MDN   RRG+P  +   D    A+  G  L    ++
Sbjct: 126 LSYILGWCVEILQAYQLVLDDI--MDNAITRRGRPCWYRHNDIGLMAVNDGILLEQAIYQ 183

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---------EFIDETQVFMI 180
           ++   K   KD      ++ L +++ ++    GQ LD+           E         I
Sbjct: 184 LL---KKYFKDKPYYTHIVELFYDVTMKS-AMGQCLDMLTAKSFKSTKLEKFTMDNYIAI 239

Query: 181 QKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
            K KT              M + +  E  ++ +     +G  FQ+ DD LDC  
Sbjct: 240 VKYKTAYYSFFLPVFLAMRMTNINDQEIFKQSKAILLEMGQFFQVQDDYLDCYG 293


>gi|17137582|ref|NP_477380.1| farnesyl pyrophosphate synthase [Drosophila melanogaster]
 gi|4689332|gb|AAD27853.1|AF132554_1 GM06581p [Drosophila melanogaster]
 gi|7303618|gb|AAF58670.1| farnesyl pyrophosphate synthase [Drosophila melanogaster]
 gi|17946048|gb|AAL49067.1| RE52884p [Drosophila melanogaster]
 gi|220942720|gb|ACL83903.1| Fpps-PA [synthetic construct]
 gi|220952876|gb|ACL88981.1| Fpps-PA [synthetic construct]
          Length = 419

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 77/227 (33%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ D+   T ++  +         ++Y +  GKK R  L             L   N  
Sbjct: 93  DLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIK 152

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+P  H   +   TAI     +    + 
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYA 210

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGAL 188
           I+    + L   +    +      I   G    Q+   +            I + KT   
Sbjct: 211 ILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAY- 269

Query: 189 MCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
             F       +  A   + E  R        +G  FQ+ DD LDC  
Sbjct: 270 YSFYLPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFG 316


>gi|3395483|emb|CAA08919.1| dimethylallyltransferase [Drosophila melanogaster]
          Length = 380

 Score = 95.6 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 77/227 (33%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ D+   T ++  +         ++Y +  GKK R  L             L   N  
Sbjct: 54  DLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDLTPENIK 113

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+P  H   +   TAI     +    + 
Sbjct: 114 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYA 171

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGAL 188
           I+    + L   +    +      I   G    Q+   +            I + KT   
Sbjct: 172 ILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAY- 230

Query: 189 MCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
             F       +  A   + E  R        +G  FQ+ DD LDC  
Sbjct: 231 YSFYLPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFG 277


>gi|146424706|dbj|BAF62113.1| farnesyl diphosphate synthase [Bombyx mori]
          Length = 427

 Score = 95.6 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 82/245 (33%), Gaps = 26/245 (10%)

Query: 10  QENSKRIDTILDDL---LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLF 65
           ++ S+    +  D+   L +T  H+      + L   ++Y +  GKK R         + 
Sbjct: 86  KDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKML 145

Query: 66  ----NVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               N+     L     G  +E  H + L+ +D+  M+   +RRG P  H + D     I
Sbjct: 146 EKKENLTPENILLANVMGWCVEMFHTHQLLLNDI--MEGTTMRRGVPCWHRRPDVGLNGI 203

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----- 173
               L+  A  + +S K           +L  T N  L     G  +       D     
Sbjct: 204 NDAALIQSA--MYTSVKRHFNSKPYYNYVLE-TFNEMLMKCSMGHYVQKLMLKTDKPDLS 260

Query: 174 ---ETQVFMIQKMKT-GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLL 228
                +   I K KT             +M          + +     +G  FQ+ DD L
Sbjct: 261 LFTMEKYEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFL 320

Query: 229 DCEED 233
           DC  D
Sbjct: 321 DCFGD 325


>gi|58271236|ref|XP_572774.1| farnesyltranstransferase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134114510|ref|XP_774085.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256717|gb|EAL19438.1| hypothetical protein CNBH0100 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229033|gb|AAW45467.1| farnesyltranstransferase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 322

 Score = 95.6 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 14/213 (6%)

Query: 27  TASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                     + L+    Y +   GK+IRS L+        V+      +   +  +H  
Sbjct: 11  ADPKWSESQENILMEPYIYISQNPGKEIRSKLIDAFNQWLEVDKDDLKVITKVVRMLHNA 70

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   DN  +RRG P  H  Y     I A N +   AF+ +   ++ +    + +
Sbjct: 71  SLLMDDVE--DNSELRRGLPVAHTIYGVPQTINAANYVYFLAFQELLQLRSGVMGKGKDK 128

Query: 146 LM-LSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMA 200
            + L    N  L  +  GQ +D+          E +   +   K G L+  A +   +MA
Sbjct: 129 EVDLVAAVNEELLQLHRGQGMDLFWRDSLTCPTEKEYIDMVLGKAGGLLRLAVKL--MMA 186

Query: 201 HASQN-EKERLRCFGENLGIIFQLADDLLDCEE 232
            +  N +   L      + + FQ+ DD ++ + 
Sbjct: 187 KSDSNVDYVPLVNL---ISVWFQIRDDYMNLQS 216


>gi|45190485|ref|NP_984739.1| AEL122Wp [Ashbya gossypii ATCC 10895]
 gi|44983427|gb|AAS52563.1| AEL122Wp [Ashbya gossypii ATCC 10895]
          Length = 351

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 89/233 (38%), Gaps = 36/233 (15%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN----------VNHLTALRVGAAIE 80
           +     D    ++ Y   GGK  R   V +   +              +     +G  +E
Sbjct: 30  IPQDAIDWYEKSLNYNTPGGKLNRGLSVVDTYVILKNCKSPLDLPVDEYRRVALLGWCVE 89

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +  Y L+ DD+  MD    RRG+P  +   +       G+  +  AF + ++    LK 
Sbjct: 90  LLQAYFLVADDM--MDKSITRRGQPCWYRVEE------VGDMAINDAFMLEAAIYCLLKR 141

Query: 141 NIRSQL----MLSLTHNIGLQGMLGGQMLDIQ--DEFI------DETQVFMIQKMKTGAL 188
           N R Q     +L L H++  Q  + GQ+LD+    EFI         +   I   KT   
Sbjct: 142 NFRDQPYYVDLLELLHDVTFQTEV-GQLLDLMTAPEFIVDLNKFSLQRHSYIVIFKTAYY 200

Query: 189 MCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
             +   + A+ A     + +  + R     LG  FQ+ DD LDC     D+ K
Sbjct: 201 SFYLPVALAMYAAGVNDERDFAQAREVLLPLGEYFQIQDDYLDCFGRPEDIGK 253


>gi|58267962|ref|XP_571137.1| isoprenoid biosynthesis-related protein [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134112405|ref|XP_775178.1| hypothetical protein CNBE4510 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257830|gb|EAL20531.1| hypothetical protein CNBE4510 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227371|gb|AAW43830.1| isoprenoid biosynthesis-related protein, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 374

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 83/247 (33%), Gaps = 32/247 (12%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
                R + + D +  +  ++     M     +     + +   GGK  R   V +   +
Sbjct: 28  AARRARFEKVFDQIAEELLTYVKGEGMPKDAVEWYQKVLYHNTPGGKLNRGMSVVDTVEI 87

Query: 65  FNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                     +  A  +G  +E +  Y L+ DD+  MD    RRG+P  +   +      
Sbjct: 88  LKGRELSEEEYTNAAILGWCVELLQAYFLVADDI--MDQSVTRRGQPCWYRVPN------ 139

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQDEFIDET 175
            GN  +  AF + ++    LK + RSQ        + L+       GQ++D+     D  
Sbjct: 140 VGNIAINDAFMLEAAIYYLLKKHFRSQKYYVDLMELFLETTFQTELGQLVDLITAPEDHV 199

Query: 176 QV--------FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLAD 225
            +         +I   KT              M+         L       LG  FQ+ D
Sbjct: 200 DLNKFSLEKHHLIVVYKTAFYSFYLPVALAMHMSGVEDKAAFDLALKILLPLGEYFQVQD 259

Query: 226 DLLDCEE 232
           D LDC  
Sbjct: 260 DYLDCYG 266


>gi|328870615|gb|EGG18988.1| putative protein serine/threonine kinase [Dictyostelium
           fasciculatum]
          Length = 1550

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 85/250 (34%), Gaps = 28/250 (11%)

Query: 10  QENSKRID--TILDDLLLQTASHMQTQHNDRLLSAI--RYALLGGKKIRSF-------LV 58
           +E    ++   IL + +L+    M      R   ++     + GGK  R         L+
Sbjct: 37  EEVQDFVEIFPILKNEILKDLPSMDIPEPARHWISMNIEKNVAGGKMNRGLTVIHSLQLL 96

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD---EVT 115
            E   L       A  +G  IE +  + L+ DD+  MD    RRG P  +   +   +  
Sbjct: 97  VEGRQLTRSEVFKANVLGWCIEWLQAFFLVSDDI--MDQSITRRGAPCWYRTNNPISKDQ 154

Query: 116 AIIAGNGLLTYAFEIISSP----KTQLKDNIRSQLMLSLTHNIGLQGMLGG------QML 165
             + GN  +  +F + S      K   ++      ++ L H +  Q  LG       Q  
Sbjct: 155 NALVGNIAINDSFILESCIYILIKKYFRNEAYYADVMDLFHEVTYQTELGQLLDLTTQPN 214

Query: 166 DIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQL 223
                         I K KT             +MA  +     +  +     +G  FQ+
Sbjct: 215 RGDFSLFQLDTYNRIVKYKTSYYSFYLPVALAMLMAGITSKPAFDTAQDILLPMGEYFQI 274

Query: 224 ADDLLDCEED 233
            DD LDC  D
Sbjct: 275 QDDYLDCYGD 284


>gi|6016044|sp|O64905|FPPS_HELAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|3002542|gb|AAC78557.1| farnesyl pyrophosphate synthase [Helianthus annuus]
          Length = 341

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 86/247 (34%), Gaps = 23/247 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   L SK     +   T+  +LL   A          +   + Y + GGK  R   V +
Sbjct: 1   MASDLKSKFLHVYQ---TLKSELLNDPAFEFHHDSRQWIDKMLDYNVPGGKLNRGLSVVD 57

Query: 61  CASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
              L     LT      A  +G  IE +  Y L+ DD+  MD  + RRG+P         
Sbjct: 58  SYQLLKGAELTDDEIFLASALGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRLPKVG 115

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
             I A +GL+     +    K   +       ++ L + +       GQM+D+    + E
Sbjct: 116 M-IAANDGLILRN-HVPRILKKHFRGKPYYVDLVDLFNEVE-FQTASGQMIDLITTLVGE 172

Query: 175 TQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
             +          I + KT             +M     +    ++     +G  FQ+ D
Sbjct: 173 KDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDNHVEVKNVLVEMGTYFQVQD 232

Query: 226 DLLDCEE 232
           D LDC  
Sbjct: 233 DYLDCFG 239


>gi|120478|sp|P05369|FPPS_RAT RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Cholesterol-regulated 39 kDa
           protein; Short=CR 39; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
          Length = 353

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 84/256 (32%), Gaps = 28/256 (10%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG     +     Q   +    I+  L      H +      R+   + Y  +GGK  R
Sbjct: 1   MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 60

Query: 55  SFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V +                  AL VG  +E +  + L+ DD+  MD+ Y RRG+   
Sbjct: 61  GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDI--MDSSYTRRGQICW 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  + GQ LD+
Sbjct: 119 YQKPGIGL-DAINDALLLEA-AIYRLLKFYCREQPYYLNLLELFLQSSYQTEI-GQTLDL 175

Query: 168 QDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
                         E +   I K KT          +   MA    + E          +
Sbjct: 176 ITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEM 235

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ DD LD   D
Sbjct: 236 GEFFQIQDDYLDLFGD 251


>gi|73961593|ref|XP_537252.2| PREDICTED: similar to farnesyl diphosphate synthase [Canis
           familiaris]
          Length = 420

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 86/256 (33%), Gaps = 28/256 (10%)

Query: 1   MNGG--LPSKLQENSKRID---TILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   L +  Q     I     I+  L      H +T     RL   + Y  +GGK  R
Sbjct: 68  MNGDQKLDAYAQARQDFIQHFPQIVKILTEDGMGHPETGDAIARLKEVLEYNAVGGKYQR 127

Query: 55  SFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V                +   AL VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 128 GLTVLIAFQELVEPRKQDAASLRRALTVGWCVELLQAFFLVSDDI--MDSSLTRRGQICW 185

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      ++ L      Q  + GQ LD+
Sbjct: 186 YQKPGIGL-DAINDALLLEA-CIYRLLKVYCREQPYYLNLIELFLQSSYQTEI-GQTLDL 242

Query: 168 QDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
                         E +   I K KT          +   MA    + E    +     +
Sbjct: 243 ITAPQGSVDLSRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEM 302

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ DD LD   D
Sbjct: 303 GEFFQIQDDFLDLFGD 318


>gi|13929206|ref|NP_114028.1| farnesyl pyrophosphate synthase [Rattus norvegicus]
 gi|204092|gb|AAA41143.1| farnesyl pyrophosphate synthetase [Rattus norvegicus]
 gi|37590777|gb|AAH59125.1| Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase)
           [Rattus norvegicus]
 gi|149048093|gb|EDM00669.1| rCG62519, isoform CRA_a [Rattus norvegicus]
          Length = 353

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 84/256 (32%), Gaps = 28/256 (10%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG     +     Q   +    I+  L      H +      R+   + Y  +GGK  R
Sbjct: 1   MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 60

Query: 55  SFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V +                  AL VG  +E +  + L+ DD+  MD+ + RRG+   
Sbjct: 61  GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDI--MDSSHTRRGQICW 118

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  + GQ LD+
Sbjct: 119 YQKPGIGL-DAINDALLLEA-AIYRLLKFYCREQPYYLNLLELFLQSSYQTEI-GQTLDL 175

Query: 168 QDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
                         E +   I K KT          +   MA    + E          +
Sbjct: 176 ITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEM 235

Query: 218 GIIFQLADDLLDCEED 233
           G  FQ+ DD LD   D
Sbjct: 236 GEFFQIQDDYLDLFGD 251


>gi|256831589|ref|YP_003160316.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
 gi|256685120|gb|ACV08013.1| Polyprenyl synthetase [Jonesia denitrificans DSM 20603]
          Length = 345

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 85/246 (34%), Gaps = 38/246 (15%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN--- 66
           E + R DT L   L  TAS   +  + +L  A      G G++IR  L  E  +  +   
Sbjct: 4   EPTTRPDTDLSASLSTTASAAISDFHTQLSQA-----HGRGRQIRPRLFLEVYAALSHRE 58

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH----------- 108
                         +V  AIE +H   LIHDD+  +D+  +RRG   ++           
Sbjct: 59  KHPHLRVTERPEIQQVAHAIELLHTSFLIHDDV--IDHDTMRRGHTNINGHFELVALSSG 116

Query: 109 ------IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                         I+ G   LT A   +++     +   R         ++   G L  
Sbjct: 117 ASAADAHTLGNTAGILGGVLALTEALMQVAALDFPHRQRQRLLTAFQEAISLSALGELLD 176

Query: 163 QMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                       T    I ++KT            A+MA       + L   G +LG+ +
Sbjct: 177 VHSATIPAPTPMTDTITIAELKTAEYSFVLPMRLAAMMA--DDANTDALAGVGRHLGVAY 234

Query: 222 QLADDL 227
           QL DDL
Sbjct: 235 QLHDDL 240


>gi|75233326|sp|Q7XYS9|FPPS1_ARTSI RecName: Full=Farnesyl diphosphate synthase 1; Includes: RecName:
           Full=Dimethylallyltranstransferase; Includes: RecName:
           Full=(2E,6E)-farnesyl diphosphate synthase
 gi|32329199|gb|AAP74720.1| farnesyl diphosphate synthase [Artemisia spiciformis]
          Length = 346

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 89/248 (35%), Gaps = 21/248 (8%)

Query: 1   MNGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           M+      L+ +  K  DT+  DL+   A          +   + Y + GGK  R   V 
Sbjct: 1   MSSSKSIDLKSKFLKVYDTLKSDLINDPAFEFDDDSRQWIQKMLDYNVPGGKLNRGLSVV 60

Query: 60  ECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +   L     L+      +  +G  IE +  Y L+ DD+  MD  + RRG+P        
Sbjct: 61  DSYQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPCWFRLPKV 118

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
              I A +G+L     +    K   +       ++ L + +       GQM+D+    + 
Sbjct: 119 GM-IAANDGILLRN-HVPRILKKHFRGKPYYVDLVDLFNEVE-FQTASGQMIDLITTLVG 175

Query: 174 ETQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E  +          I + KT             +M     ++   ++     +G  FQ+ 
Sbjct: 176 EKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQ 235

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 236 DDYLDCFG 243


>gi|56756549|gb|AAW26447.1| SJCHGC00702 protein [Schistosoma japonicum]
          Length = 325

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 11/148 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS L+        V   T   + + I+ +H  SLI DD+   D  Y+RRGKP  H 
Sbjct: 29  GKGIRSLLMAAFNYWLKVPESTLDVISSVIQMLHNASLIIDDIE--DGSYLRRGKPAAHC 86

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   ++I + N +   A E +S  +      I ++ ML L    G+        +  + 
Sbjct: 87  VFGTASSINSANYVYFLALEKLSVLRRPESVKIFTEQMLELHRGQGM-------DIYWRS 139

Query: 170 EFI--DETQVFMIQKMKTGALMCFACES 195
            F    E++   +   KTG L       
Sbjct: 140 SFKCPSESEYEAMVLCKTGGLFGLGVRL 167


>gi|149245192|ref|XP_001527130.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449524|gb|EDK43780.1| farnesyl pyrophosphate synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 351

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 31/248 (12%)

Query: 10  QENSKRIDTILDDLLLQ-----TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           +   +R   +  D++ +      +  M  +  D    +++Y   GGK  R   V +  ++
Sbjct: 5   EAARERFVNVFQDIVEELTEILKSYKMPQEAIDWFNKSLQYNTPGGKLNRGLSVVDTYAI 64

Query: 65  FN---------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-V 114
            N           +  A  +G AIE +  Y L+ DD+  MD    RRG+P  ++      
Sbjct: 65  LNNTSADKLDDAQYKKAAILGWAIELLQAYFLVADDM--MDQSKTRRGQPCWYLAEGVGN 122

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEF 171
            AI     L    +EI+   +   + +     +L L H +  Q  L GQ+LD     +E 
Sbjct: 123 IAINDSFMLEGAIYEIL---RKHFRQDSYYVDLLDLFHEVTFQTEL-GQLLDLVTADEEH 178

Query: 172 IDE-----TQVFMIQKMKTGAL-MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLA 224
           +D       +   I   KT              M+  +   + ++++     LG  FQ+ 
Sbjct: 179 VDLSKFSLAKHSFIVIFKTAYYSFYLPVALAMYMSGISDAKDLQQVKDILIPLGEYFQIQ 238

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 239 DDFLDCFG 246


>gi|63022081|gb|AAY26575.1| putative farnesyl diphosphate synthase [Choristoneura fumiferana]
          Length = 428

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 23/228 (10%)

Query: 24  LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALRV 75
           L +T+ H+      R L   ++Y +  GKK R         +              A  +
Sbjct: 104 LTETSKHVDVPEASRWLAKLLQYNVPNGKKNRGLATVLAYKMLEKPENLTPENVHLANVM 163

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G   E  H + L+ +D+  M+   +RRG P  H + D   +    + +L  +  + S+ K
Sbjct: 164 GWCTEMFHTHQLLLNDI--MEGTEMRRGAPAWHRRPDVGLSS-INDAILVQS-AMYSTLK 219

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ETQVFMIQKMKTGA 187
                    + ++ + + + L+    GQ L+      D          +   I K KT  
Sbjct: 220 KHFHAKPYYKNVIEMFNEMLLKC-STGQFLEKAMAKTDKPDLSQFTMEKYLTIAKYKTAY 278

Query: 188 -LMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED 233
                      +M+         + +     +G  FQ+ DD LDC  D
Sbjct: 279 HTFQMPVGLALLMSGVDDLETHRQAKTILLEMGQFFQIQDDFLDCFGD 326


>gi|300431229|gb|ADK12004.1| farnesyl diphosphate synthase [Aralia elata]
          Length = 342

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 86/243 (35%), Gaps = 22/243 (9%)

Query: 7   SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           S L+     + ++L  +LL   A          +   + Y + GGK  R   V +   L 
Sbjct: 2   SDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61

Query: 66  NVNHLTAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 +         +G  IE +  Y L+ DD+  MD+ + RRG+P           I 
Sbjct: 62  KEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGM-IA 118

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
             +G+L     I    K   +       +L L + +  Q    GQM+D+    + E  + 
Sbjct: 119 VNDGILLRN-HIPRILKKHFRQKPYYVDLLDLFNEVEFQTAC-GQMIDLITTLVGEKDLS 176

Query: 178 -------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                    I + KT             +M+     +   ++     +G  FQ+ DD LD
Sbjct: 177 KYSLPIHRRIVQYKTAYYSFYLPVACALLMSGGDLEKHTNVKDILIEMGTYFQVQDDYLD 236

Query: 230 CEE 232
           C  
Sbjct: 237 CFG 239


>gi|63103161|gb|AAY33486.1| putative farnesyl diphosphate synthase [Choristoneura fumiferana]
          Length = 428

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 23/228 (10%)

Query: 24  LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFNVNH-------LTALRV 75
           L +T+ H+      R L   ++Y +  GKK R         +              A  +
Sbjct: 104 LTETSKHVDVPEASRWLAKLLQYNVPNGKKNRGLATVLAYKMLEKPENLTPENVHLANVM 163

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G   E  H + L+ +D+  M+   +RRG P  H + D   +    + +L  +  + S+ K
Sbjct: 164 GWCTEMFHTHQLLLNDI--MEGTEMRRGAPAWHRRPDVGLSS-INDAILVQS-AMYSTLK 219

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ETQVFMIQKMKTGA 187
                    + ++ + + + L+    GQ L+      D          +   I K KT  
Sbjct: 220 KHFHAKPYYKNVIEMFNEMLLKC-STGQFLEKAMAKTDKPDLSQFTMEKYLTIAKYKTAY 278

Query: 188 -LMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED 233
                      +M+         + +     +G  FQ+ DD LDC  D
Sbjct: 279 HTFQMPVGLALLMSGVDDLETHRQAKTILLEMGQFFQIQDDFLDCFGD 326


>gi|270356886|gb|ACZ80672.1| putative isoprenoid biosynthesis-related protein [Filobasidiella
           depauperata]
          Length = 375

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 32/247 (12%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
                R + + D +  +  ++     M     +     + +   GGK  R   V +   +
Sbjct: 29  AARRARFEKVFDQIAEELLAYVKVEGMPKDAVEWYQKVLYHNTPGGKLNRGMSVVDTVEI 88

Query: 65  FNV---NHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 N    ++       +E +  Y L+ DD+  MD    RRG+P  +   +      
Sbjct: 89  LKGRDLNEEEYVKAAILGWCVELLQAYFLVADDI--MDQSVTRRGQPCWYKMPN------ 140

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQDEFIDET 175
            GN  +  AF + ++    LK + RS+        + L+       GQ++D+     D  
Sbjct: 141 VGNIAINDAFMLEAAIYHLLKKHFRSEKYYVDLMELFLETTFQTELGQLVDLITAPEDHV 200

Query: 176 QV--------FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGIIFQLAD 225
            +         +I   KT              M+     +   L       LG  FQ+ D
Sbjct: 201 DLNKFSLEKHHLIVVYKTAFYSFYLPVALAMRMSGIEDKDAYDLAVKILIPLGEYFQVQD 260

Query: 226 DLLDCEE 232
           D LDC  
Sbjct: 261 DYLDCYG 267


>gi|326773501|ref|ZP_08232784.1| polyprenyl synthetase [Actinomyces viscosus C505]
 gi|326636731|gb|EGE37634.1| polyprenyl synthetase [Actinomyces viscosus C505]
          Length = 364

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 87/243 (35%), Gaps = 46/243 (18%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL--------TALRVGAAIECIHCY 85
           Q    LL A    L GGK++R+ L     ++ +             A+ +GAA+E     
Sbjct: 13  QAAPELLEAAGSVLSGGKRMRAVLGAVGCAILSTPERRSEYLTASDAVHLGAALELYQAS 72

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQY----------------DEVTAIIAGNGLLTYAFE 129
           +L+HDDL  MD    RRG P  H  +                    AI+ G+ LL+ A E
Sbjct: 73  ALVHDDL--MDGADTRRGLPAAHRVFARDHEDRGWLGRPQTFGANGAILLGDLLLSLAGE 130

Query: 130 IISSP---KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET----------- 175
            +S+    +T  +    +        +     +  GQ LD++ E +              
Sbjct: 131 EMSALAPSRTSSQTRGSAVRHARSAFDAMTTEVALGQFLDVRSENLPLPWDREPGAAARL 190

Query: 176 ---QVFMIQKMKTGALMC---FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                  + + K+            +       S    E L  FGE++GI FQL DD L 
Sbjct: 191 MQGDALSVVRHKSARYSVRHPLLIGALLAGLDPSGATAEHLAAFGEDVGIAFQLRDDELG 250

Query: 230 CEE 232
              
Sbjct: 251 VFG 253


>gi|195476038|ref|XP_002090289.1| GE13024 [Drosophila yakuba]
 gi|194176390|gb|EDW90001.1| GE13024 [Drosophila yakuba]
          Length = 419

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 76/228 (33%), Gaps = 17/228 (7%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ D+   T ++  +         ++Y +  GKK R  L             L   N  
Sbjct: 93  DLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 152

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+P  H   +   TAI     +    + 
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYA 210

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGAL 188
           I+    + L   +    +      I   G    Q+   +            I + KT   
Sbjct: 211 ILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYY 270

Query: 189 -MCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
                      +A     + E  R        +G  FQ+ DD LDC  
Sbjct: 271 SFYLPFALALHLAGF--KDAEAFRQSKTILLEMGNFFQVQDDFLDCFG 316


>gi|1346030|sp|P49350|FPPS_ARTAN RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|1022770|gb|AAC49452.1| farnesyl diphosphate synthase [Artemisia annua]
          Length = 343

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 89/248 (35%), Gaps = 24/248 (9%)

Query: 1   MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           M+   L SK     K  DT+  +L+   A          +   + Y + GGK  R   V 
Sbjct: 1   MSSTDLKSKF---LKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVV 57

Query: 60  ECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +   L     L+      +  +G  IE +  Y L+ DD+  MD  + RRG+P        
Sbjct: 58  DSYQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPCWFRLPKV 115

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
              I A +G+L     +    K   +       ++ L + +       GQM+D+    + 
Sbjct: 116 GM-IAANDGILLRN-HVPRILKKHFRGKPYYVDLVDLFNEVE-FQTASGQMIDLITTLVG 172

Query: 174 ETQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E  +          I + KT             +M     ++   ++     +G  FQ+ 
Sbjct: 173 EKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQ 232

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 233 DDYLDCFG 240


>gi|50424267|ref|XP_460720.1| DEHA2F08272p [Debaryomyces hansenii CBS767]
 gi|49656389|emb|CAG89060.1| DEHA2F08272p [Debaryomyces hansenii]
          Length = 350

 Score = 94.8 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 25/238 (10%)

Query: 15  RIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN------- 66
             D ++++L      + M     D  +  + Y   GGK  R   V +   + N       
Sbjct: 13  EFDQLVEELKAILIGYKMPQDAIDWFVGNLNYNTPGGKLNRGLSVIDTYCILNNTTANDL 72

Query: 67  --VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               +     +G  IE +  Y L+ DD+  MD+   RRG+P  ++        I  + +L
Sbjct: 73  SSEEYSKVALLGWCIELLQAYFLVADDM--MDHSKTRRGQPCWYLNEGVGNIAINDSFML 130

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFI------DETQ 176
             A  I+   K   ++      +L L H +  Q  L GQ++D    DE I        ++
Sbjct: 131 EGALYIL--LKKHFRNEKYYVDLLDLFHEVTFQTEL-GQLIDLITADEEIVDLDKFSLSK 187

Query: 177 VFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              I   KT     +   + A+      S+ + +++R     LG  FQ+ DD LDC  
Sbjct: 188 HSFIVIYKTAYYSFYLPVALAMFMSGINSEQDLKQVRDILIPLGEYFQIQDDFLDCFG 245


>gi|6322294|ref|NP_012368.1| Erg20p [Saccharomyces cerevisiae S288c]
 gi|120479|sp|P08524|FPPS_YEAST RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|171517|gb|AAA34606.1| farnesyl diphosphate synthetase (EC 2.5.1.1) [Saccharomyces
           cerevisiae]
 gi|1008358|emb|CAA89462.1| ERG20 [Saccharomyces cerevisiae]
 gi|190409344|gb|EDV12609.1| farnesyl diphosphate synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207344136|gb|EDZ71372.1| YJL167Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271340|gb|EEU06405.1| Erg20p [Saccharomyces cerevisiae JAY291]
 gi|285812738|tpg|DAA08636.1| TPA: Erg20p [Saccharomyces cerevisiae S288c]
 gi|290771068|emb|CAY80618.2| Erg20p [Saccharomyces cerevisiae EC1118]
 gi|323332955|gb|EGA74357.1| Erg20p [Saccharomyces cerevisiae AWRI796]
 gi|323337022|gb|EGA78278.1| Erg20p [Saccharomyces cerevisiae Vin13]
 gi|323348011|gb|EGA82269.1| Erg20p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 352

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 35/242 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---------SL 64
           K ++ +   LL   A  M  +  D    ++ Y   GGK  R   V +            L
Sbjct: 18  KLVEELNASLL---AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQL 74

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               +     +G  IE +  Y L+ DD+  MD    RRG+P  +   +       G   +
Sbjct: 75  GQEEYEKVAILGWCIELLQAYFLVADDM--MDKSITRRGQPCWYKVPE------VGEIAI 126

Query: 125 TYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
             AF + ++    LK + R++     +  L H +  Q  L GQ++D+     D+  +   
Sbjct: 127 NDAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTEL-GQLMDLITAPEDKVDLSKF 185

Query: 179 ------MIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDC 230
                  I   KT     +   + A+       + + ++ R     LG  FQ+ DD LDC
Sbjct: 186 SLKKHSFIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245

Query: 231 EE 232
             
Sbjct: 246 FG 247


>gi|323304418|gb|EGA58189.1| Erg20p [Saccharomyces cerevisiae FostersB]
          Length = 352

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 35/242 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---------SL 64
           K ++ +   LL   A  M  +  D    ++ Y   GGK  R   V +            L
Sbjct: 18  KLVEELNASLL---AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQL 74

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               +     +G  IE +  Y L+ DD+  MD    RRG+P  +   +       G   +
Sbjct: 75  GQEEYEKVAILGWCIELLQAYFLVADDM--MDKSITRRGQPCWYKVPE------VGEIAI 126

Query: 125 TYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
             AF + ++    LK + R++     +  L H +  Q  L GQ++D+     D+  +   
Sbjct: 127 NDAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTEL-GQLMDLITAPEDKVDLSKF 185

Query: 179 ------MIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDC 230
                  I   KT     +   + A+       + + ++ R     LG  FQ+ DD LDC
Sbjct: 186 SLKKHSFIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245

Query: 231 EE 232
             
Sbjct: 246 FG 247


>gi|90109287|pdb|2F7M|F Chain F, Crystal Structure Of Unliganded Human Fpps
 gi|90109296|pdb|2F89|F Chain F, Crystal Structure Of Human Fpps In Complex With
           Pamidronate
 gi|90109297|pdb|2F8C|F Chain F, Crystal Structure Of Fpps In Complex With Zoledronate
 gi|90109305|pdb|2F8Z|F Chain F, Crystal Structure Of Human Fpps In Complex With
           Zoledronate And Isopentenyl Diphosphate
 gi|90109306|pdb|2F92|F Chain F, Crystal Structure Of Human Fpps In Complex With
           Alendronate
 gi|90109307|pdb|2F94|F Chain F, Crystal Structure Of Human Fpps In Complex With
           Ibandronate
 gi|90109321|pdb|2F9K|F Chain F, Crystal Structure Of Human Fpps In Complex With
           Zoledronate And Zn2+
 gi|303325057|pdb|3N1V|F Chain F, Human Fpps Complex With Fbs_01
 gi|303325058|pdb|3N1W|F Chain F, Human Fpps Complex With Fbs_02
 gi|303325075|pdb|3N3L|F Chain F, Human Fpps Complex With Fbs_03
 gi|303325076|pdb|3N49|F Chain F, Human Fpps Complex With Nov_292
 gi|303325079|pdb|3N5H|F Chain F, Human Fpps Complex With Nov_304
 gi|303325080|pdb|3N5J|F Chain F, Human Fpps Complex With Nov_311
 gi|303325081|pdb|3N6K|F Chain F, Human Fpps Complex With Nov_823
 gi|307448381|pdb|3N45|F Chain F, Human Fpps Complex With Fbs_04 And Zoledronic AcidMG2+
 gi|307448382|pdb|3N46|F Chain F, Human Fpps Complex With Nov_980 And Zoledronic AcidMG2+
          Length = 350

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 83/243 (34%), Gaps = 25/243 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSF-LVTECASLFNV 67
           Q+  +    I+  L      H +      RL   + Y  +GGK  R   +V     L   
Sbjct: 12  QDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEP 71

Query: 68  NHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAG 120
               A  +      G  +E +  + L+ DD+  MD+   RRG+   + +      AI   
Sbjct: 72  RKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICWYQKPGVGLDAINDA 129

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--------FI 172
           N L    + ++   K   ++      ++ L      Q  + GQ LD+             
Sbjct: 130 NLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLDLLTAPQGNVDLVRF 185

Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDC 230
            E +   I K KT          +   MA    + E    +     +G  FQ+ DD LD 
Sbjct: 186 TEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDL 245

Query: 231 EED 233
             D
Sbjct: 246 FGD 248


>gi|151944962|gb|EDN63217.1| FPP synthetase [Saccharomyces cerevisiae YJM789]
          Length = 352

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 35/242 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---------SL 64
           K ++ +   LL   A  M  +  D    ++ Y   GGK  R   V +            L
Sbjct: 18  KLVEELNASLL---AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSKKTVEQL 74

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               +     +G  IE +  Y L+ DD+  MD    RRG+P  +   +       G   +
Sbjct: 75  GQEEYEKVAILGWCIELLQAYFLVADDM--MDKSITRRGQPCWYKVPE------VGEIAI 126

Query: 125 TYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
             AF + ++    LK + R++     +  L H +  Q  L GQ++D+     D+  +   
Sbjct: 127 NDAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTEL-GQLMDLITAPEDKVDLSKF 185

Query: 179 ------MIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDC 230
                  I   KT     +   + A+       + + ++ R     LG  FQ+ DD LDC
Sbjct: 186 SLKKHSFIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245

Query: 231 EE 232
             
Sbjct: 246 FG 247


>gi|212534902|ref|XP_002147607.1| farnesyl-pyrophosphate synthetase [Penicillium marneffei ATCC
           18224]
 gi|210070006|gb|EEA24096.1| farnesyl-pyrophosphate synthetase [Penicillium marneffei ATCC
           18224]
          Length = 347

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 82/236 (34%), Gaps = 16/236 (6%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLV-----TECASL 64
           E    +  ++ D++  T  +   ++  +   +++   ++GGK  R   V           
Sbjct: 9   EFEAFVHPLIKDIVEATDKYNLPENAKKWFFNSLNANIVGGKMNRGMSVPDTGSILLGRP 68

Query: 65  FNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                L  L  +G   E +  + L+ DD+  MD    RRG+P  + Q       I    +
Sbjct: 69  LTEEELNHLSVLGWLTELLQAFFLVSDDI--MDGSITRRGQPCWYRQEGVGMIAINDAFM 126

Query: 124 LTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVF 178
           L  A  +I            D I      S    +G L  ++     ++        +  
Sbjct: 127 LESAIYVILKKYFRSHPAYADFIDIFHETSWQTELGQLCDLITAPEDNVDLNNFSMEKYT 186

Query: 179 MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I K KT     +   + A+  +  AS    ++       LG  FQ+ DD LD   
Sbjct: 187 FIVKYKTAYYSFYLPVALALYYLQVASPKNLKQCEDILIPLGEYFQIQDDYLDAFG 242


>gi|212274364|ref|NP_001130900.1| hypothetical protein LOC100192004 [Zea mays]
 gi|194690400|gb|ACF79284.1| unknown [Zea mays]
          Length = 355

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 82/236 (34%), Gaps = 35/236 (14%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-------NHLTAL 73
           +++L   A     +    +   + Y +LGGK  R   V +   +              A 
Sbjct: 30  EEMLDDPAFEFTDESLQWIDRMLDYNVLGGKCNRGLSVIDSYRILKGVDVLSKEETFLAC 89

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIIS 132
            +G  IE +  Y L+ DD+  MDN   RRG+P           A+  G  L  +   I+ 
Sbjct: 90  TLGWCIEWLQAYFLVLDDI--MDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQ 147

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMK 184
                 K       ++ L + +       GQMLD+      E  +          I + K
Sbjct: 148 R---HFKGKPYYVDVIDLFNEVE-FKTASGQMLDLITTHEGEKDLTKYNLTVRRHIVQYK 203

Query: 185 TGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQLADDLLDCEED 233
           T             ++A       E L  FG  +N+    G   Q+ DD LDC  D
Sbjct: 204 TAYYSFYLPVACALLLAG------ENLDNFGDVKNILVEMGTYLQVQDDYLDCFGD 253


>gi|255724742|ref|XP_002547300.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404]
 gi|240135191|gb|EER34745.1| farnesyl pyrophosphate synthetase [Candida tropicalis MYA-3404]
          Length = 351

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 94/247 (38%), Gaps = 29/247 (11%)

Query: 10  QENSKRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
               +R  ++ DD + +         M  +  D  +  + Y   GGK  R   V +  ++
Sbjct: 5   AAARERFISVFDDAVEELKEVLVSYKMPQEAIDWFVKNLNYNTPGGKLNRGLSVVDTFAI 64

Query: 65  FNVNHLTALR---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            N      L          +G AIE +  Y L+ DD+  MD    RRG+   ++      
Sbjct: 65  LNNTTADKLNDEQYKKVALLGWAIELLQAYFLVADDM--MDQSKTRRGQKCWYLVEGVGN 122

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFI- 172
             I  + +L  A  ++   K   + +     +L L H +  Q  L GQ+LD    DE + 
Sbjct: 123 IAINDSFMLEGAIYVL--LKKHFRQDPYYVDLLDLFHEVTFQTEL-GQLLDLVTADEEVV 179

Query: 173 -----DETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLAD 225
                   +   I   KT     +   + A+      S+ + +++R     LG  FQ+ D
Sbjct: 180 DLDKFSLDKHSFIVIFKTAYYSFYLPVALAMYMSGINSEEDLKQVRDILIPLGEYFQIQD 239

Query: 226 DLLDCEE 232
           D LDC  
Sbjct: 240 DFLDCFG 246


>gi|1749416|dbj|BAA13767.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 339

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 27/208 (12%)

Query: 45  YALLGGKKIRSFLVTECASLFNV---NHLTALRVGA---AIECIHCYSLIHDDLPSMDNG 98
           +  LGGK  R   V +   +      +    ++       +E +  + LI DD+  MD  
Sbjct: 29  HNTLGGKYNRGLSVIDSYEILLGHPLDEAAYMKAAVLGWMVELLQSFFLIADDI--MDAS 86

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNI 154
             RRG+P  ++          GN  +  AF + S+    LK + R +     ++ L H++
Sbjct: 87  KTRRGQPCWYLMPG------VGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDV 140

Query: 155 GLQGMLGGQM--LDIQDEFIDETQ-----VFMIQKMKTG-ALMCFACESGAIMAH-ASQN 205
             Q  LG Q+  L   ++ +D ++        I   KT         E    +A  A+  
Sbjct: 141 TFQTELGQQLDLLTAPEDSVDLSKFSLQKHSFIVIYKTAFYSFYLPVELAMHLAGVATPE 200

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED 233
             +  +     LG  FQ+ DD LDC  D
Sbjct: 201 NLKCAQDILIILGKYFQVQDDYLDCYGD 228


>gi|323308567|gb|EGA61811.1| Erg20p [Saccharomyces cerevisiae FostersO]
          Length = 352

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 35/242 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---------SL 64
           K ++ +   LL   A  M  +  D    ++ Y   GGK  R   V +            L
Sbjct: 18  KLVEELNASLL---AYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQL 74

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               +     +G  IE +  Y L+ DD+  MD    RRG+P  +   +       G   +
Sbjct: 75  GQEEYEKVAILGWCIELLQAYFLVADDM--MDKSITRRGQPCWYKVPE------VGEIAI 126

Query: 125 TYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-- 178
             AF + ++    LK + R++     +  L H +  Q  L GQ++D+     D+  +   
Sbjct: 127 NDAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTEL-GQLMDLITAPEDKVDLSKF 185

Query: 179 ------MIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDC 230
                  I   KT     +   + A+       + + ++ R     LG  FQ+ DD LDC
Sbjct: 186 SLKKHSFIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDC 245

Query: 231 EE 232
             
Sbjct: 246 FG 247


>gi|167517607|ref|XP_001743144.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778243|gb|EDQ91858.1| predicted protein [Monosiga brevicollis MX1]
          Length = 315

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 12/197 (6%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L    RY     GK IRS L+    +   V       +    + +H  SL+ DD+   DN
Sbjct: 23  LEEPYRYVTQKPGKDIRSKLINAFNAWLKVPDDKLAIIKEVTKILHNASLLIDDIE--DN 80

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  +     I   N +       +   ++       +  ++ L    GL 
Sbjct: 81  SKLRRGLPVAHAIFGIPQTINCANYMYFICMAKVMDLQSPAAAQAFTDQLIELHRGQGLD 140

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                 +         E +   +   KTG L   A     + +   ++    L+ F    
Sbjct: 141 IFWRDTVQCP-----TEEEYKRMVLQKTGGLFALALRLMQLFSDDKRDFGPLLKTFS--- 192

Query: 218 GIIFQLADDLLDCEEDL 234
            + FQ+ DD  + + D 
Sbjct: 193 -LYFQIRDDYANLQSDE 208


>gi|296939580|gb|ADH95185.1| putative farnesyl diphosphate synthase [Aquilaria microcarpa]
          Length = 342

 Score = 94.8 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 84/228 (36%), Gaps = 23/228 (10%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALR 74
           +LL   A        + +   + Y + GGK  R   V +   L    +         A  
Sbjct: 18  ELLNDPAFEFTDDSREWVDRMLDYNVPGGKLNRGLSVIDSYKLLKEGNELTEEEVFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MDN + RRG+P           A+  G  L  +   I+  
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRLPKVGLIAVNDGILLRNHISRIL-- 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +       +L L + +  Q    GQM+D+      E  +          I + KT
Sbjct: 134 -KNHFRGKAYYVDLLDLFNEVEFQTAC-GQMIDLITTLEGEKDLTKYSLSKHRRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                        +M+  + +    ++    ++GI FQ+ DD LDC  
Sbjct: 192 AYYSFYLPVACALLMSGENLDNHVDVKNILVDMGIYFQVQDDFLDCFG 239


>gi|326375390|gb|ADZ57167.1| farnesyl pyrophosphate synthase [Lilium longiflorum]
          Length = 351

 Score = 94.8 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 24/246 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L +  +E   ++ +   +LL   A          +   + Y + GGK  R   V +   
Sbjct: 12  DLKAAFREVYSQLKS---ELLEDPAFDYTEDSRSWIEQMLDYDVPGGKLNRGISVIDSYK 68

Query: 64  LF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L        N +   A  +G  IE +  Y L+ DD+  MDN + RRG+            
Sbjct: 69  LLKEVNELSNDDIFLASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQLCWFRLPKVGL- 125

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           I A +G+L     I    K   ++      +L L + +       GQMLD+      E  
Sbjct: 126 IAANDGILLRN-HIPRILKRHFREKSYYVDLLDLFNEVE-FQTASGQMLDLITTHEGEKD 183

Query: 177 --------VFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                      I + KT             +M+  + ++   ++     +G  FQ+ DD 
Sbjct: 184 LSKYKMPVYRRIVQYKTAYYSFYLPVACALLMSGENLSKFVAVKDILIEMGTYFQVQDDY 243

Query: 228 LDCEED 233
           LDC  D
Sbjct: 244 LDCFGD 249


>gi|323354370|gb|EGA86209.1| Erg20p [Saccharomyces cerevisiae VL3]
          Length = 322

 Score = 94.8 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 32/225 (14%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECA---------SLFNVNHLTALRVGAAIEC 81
           M  +  D    ++ Y   GGK  R   V +            L    +     +G  IE 
Sbjct: 1   MPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIEL 60

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +  Y L+ DD+  MD    RRG+P  +   +       G   +  AF + ++    LK +
Sbjct: 61  LQAYFLVADDM--MDKSITRRGQPCWYKVPE------VGEIAINDAFMLEAAIYKLLKSH 112

Query: 142 IRSQ----LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGALM 189
            R++     +  L H +  Q  L GQ++D+     D+  +          I   KT    
Sbjct: 113 FRNEKYYIDITELFHEVTFQTEL-GQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYS 171

Query: 190 CFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   + A+       + + ++ R     LG  FQ+ DD LDC  
Sbjct: 172 FYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFG 216


>gi|296206412|ref|XP_002750194.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
           jacchus]
          Length = 395

 Score = 94.8 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 85/254 (33%), Gaps = 24/254 (9%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +T     +L   + Y  +GGK  R
Sbjct: 43  MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDALAQLKEVLEYNAIGGKYHR 102

Query: 55  SFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V                    AL VG  +E +  + L+ DD+  MD+    RG+   
Sbjct: 103 GLTVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDI--MDSSLTHRGQICW 160

Query: 108 HIQYDEVTAIIAGNGLLTYA-----FEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLG 161
           + +          + +L  A      ++    +    + I   L  S    IG    ++ 
Sbjct: 161 YQKPGVGL-DAINDAVLLEACVYRPLKLYCREQPYYLNLIELFLQNSYQTEIGQTLDLIT 219

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGI 219
               ++  +   E +   I K KT          +   MA    + E    +     +G 
Sbjct: 220 APQDNVDPDRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKILLEMGE 279

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD LD   D
Sbjct: 280 FFQIQDDYLDLFGD 293


>gi|115491941|ref|XP_001210598.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624]
 gi|114197458|gb|EAU39158.1| hypothetical protein ATEG_00512 [Aspergillus terreus NIH2624]
          Length = 358

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 75/201 (37%), Gaps = 12/201 (5%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              ++   L+    Y L   GK IR  L+    +   V   +   +   +  +H  SL+ 
Sbjct: 47  WSAENERILMGPYDYLLQHPGKDIRRQLINAFDAWLQVPPDSLAIINKVVAMLHTSSLLI 106

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+  +RRG P  H  Y     I + N +   A + +         +I  + +L+
Sbjct: 107 DDVE--DSSALRRGIPVAHSIYGTAQTINSANYVYFLALQELQKLNNPAAIDIYVKELLN 164

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    G++      +         E +   +   KTG L   A +    +  A     + 
Sbjct: 165 LHRGQGMELFWRDTLTCP-----TEDEYLQMVGNKTGGLFRLAVK----LMQAESKTGKD 215

Query: 210 LRCFGENLGIIFQLADDLLDC 230
                  LG+IFQ+ DD L+ 
Sbjct: 216 CVSLVNVLGLIFQICDDYLNL 236


>gi|59709769|gb|AAW88510.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii]
 gi|59709775|gb|AAW88514.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
          Length = 334

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 11/184 (5%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IRS L         V     L +   I+ +H  SL+ DD+   D+  +RRG P  H  
Sbjct: 53  KDIRSGLTDAINEFLRVPEEKVLVIKRIIDLLHNASLLIDDIQ--DSSKLRRGVPVAHHI 110

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I + N     A   +          I ++ +++L    G+  +   + L     
Sbjct: 111 FGIAQTINSANLAYFIAQRELEKLTNPRAFAIYNEELINLHRGQGM-ELHWRESLHCP-- 167

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              E +   + + KTG L   A       + +  +    +      LG +FQ+ DD  + 
Sbjct: 168 --TEDEYLRMIQKKTGGLFRLAIRLLQGESASDDDYVSLIDT----LGTLFQIRDDYQNL 221

Query: 231 EEDL 234
           + D+
Sbjct: 222 QSDI 225


>gi|20135548|gb|AAM08927.1| farnesyl pyrophosphate synthase [Malus x domestica]
          Length = 342

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 89/245 (36%), Gaps = 24/245 (9%)

Query: 7   SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           + L+    ++ ++L  +LL   A          +   + Y + GGK  R   V +   L 
Sbjct: 2   ADLKSKFLKVYSVLKSELLEDPAFDFTNDSRQWVERMLDYNVPGGKLNRGLSVIDSYQLL 61

Query: 66  NVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
                        A  +G  IE +  + L+ DD+  MD  + RRG+P           A+
Sbjct: 62  QQGRELTEDEIFLASALGWCIEWLQAFFLVLDDI--MDGSHTRRGQPCWFRLPKVGMIAV 119

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
             G  L  +   I+   +   ++      +L L + +       GQM+D+      E  +
Sbjct: 120 NDGVVLRNHIPRIL---RKYFREKPYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEKDL 175

Query: 178 --------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                     I + KT       +     +M+     +   ++     +GI FQ+ DD L
Sbjct: 176 SKYSLSIHRRIVQYKTAYYSFYLSVACALLMSGEELEKHIDVKNILVEMGIYFQVQDDYL 235

Query: 229 DCEED 233
           DC  D
Sbjct: 236 DCFGD 240


>gi|125571728|gb|EAZ13243.1| hypothetical protein OsJ_03166 [Oryza sativa Japonica Group]
          Length = 375

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 88/247 (35%), Gaps = 36/247 (14%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-- 67
            E+ + ID I+  L  +     + +        + Y +LGGK  R   V +   +     
Sbjct: 40  DESLQWIDRII-SLTYECRWIKELRVAQSATKMLDYNVLGGKCNRGISVIDSFKMLKGTD 98

Query: 68  -----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGN 121
                    A  +G  IE +  Y L+ DD+  MDN   RRG+P           A+  G 
Sbjct: 99  VLNKEETFLACTLGWCIEWLQAYFLVLDDI--MDNSQTRRGQPCWFRVPQVGLIAVNDGI 156

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV---- 177
            L  +   I+       K  +    ++ L + +       GQ+LD+      E  +    
Sbjct: 157 ILRNHISRILQR---HFKGKLYYVDLIDLFNEVE-FKTASGQLLDLITTHEGEKDLTKYN 212

Query: 178 ----FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFG--ENL----GIIFQLADD 226
                 I + KT             +++       E L  FG  +N+    G  FQ+ DD
Sbjct: 213 LTVHRRIVQYKTAYYSFYLPVACALLLSG------ENLDNFGDVKNILVEMGTYFQVQDD 266

Query: 227 LLDCEED 233
            LDC  D
Sbjct: 267 YLDCYGD 273


>gi|321259617|ref|XP_003194529.1| isoprenoid biosynthesis-related protein [Cryptococcus gattii WM276]
 gi|317461000|gb|ADV22742.1| Isoprenoid biosynthesis-related protein, putative [Cryptococcus
           gattii WM276]
          Length = 374

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 88/252 (34%), Gaps = 33/252 (13%)

Query: 6   PSKLQENSK-RIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           P+ ++   + R + + D +  +  ++     M     +     + +   GGK  R   + 
Sbjct: 23  PADVKAVRRARFEKVFDQIAEELLTYVKGEGMPKDAVEWYQKVLYHNTPGGKLNRGMSLV 82

Query: 60  ECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +   +          +  A  +G  +E +  Y L+ DD+  MD    RRG+P  +   + 
Sbjct: 83  DTVEILKGRELSEEEYTNAAILGWCVELLQAYFLVADDI--MDQSVTRRGQPCWYRVPN- 139

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG---GQMLDIQDE 170
                 GN  +  AF + ++    LK + RSQ        + L+       GQ++D+   
Sbjct: 140 -----VGNIAINDAFMLEAAIYYLLKKHFRSQKYYVDLMELFLETTFQTELGQLVDLITA 194

Query: 171 FIDETQV--------FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLR-CFGENLGII 220
             D   +         +I   KT              M+         L       LG  
Sbjct: 195 PEDHVDLNKFSLEKHHLIVVYKTAFYSFYLPVALAMHMSGVEDKAAFDLALKILLPLGEY 254

Query: 221 FQLADDLLDCEE 232
           FQ+ DD LDC  
Sbjct: 255 FQVQDDYLDCYG 266


>gi|168031541|ref|XP_001768279.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680457|gb|EDQ66893.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 360

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 82/248 (33%), Gaps = 27/248 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            G    +    +    IL D  L T +    +    +   + Y + GGK  R   V    
Sbjct: 19  AGREKFMDVYQQLKKEILSDSELVTYTE---ESRAWVEEMLDYTVPGGKLNRGLSVVHSL 75

Query: 63  SLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            L   +          A  +G  IE +  Y L+ DD+  MDN   RRG+P  +       
Sbjct: 76  ELLKKDTPLSEQDTFNACALGWCIEWLQGYFLVMDDI--MDNSVTRRGQPCWYRVPKVGL 133

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            AI  G  L T+   ++     Q    +    + +            GQMLD+      E
Sbjct: 134 IAINDGIILRTHISRVLKRHFRQSPIYVELVDLFNDVE----YQTASGQMLDLITTPAGE 189

Query: 175 TQ--------VFMIQKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLA 224
                        I K KT             ++A  +   K E  +     +G  FQ+ 
Sbjct: 190 VDLSKYVLPTYLRIVKYKTAYYSFYLPVACALLLAGETSVAKFEAAKEVLVQMGTYFQVQ 249

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 250 DDYLDCYG 257


>gi|145591919|ref|YP_001153921.1| polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283687|gb|ABP51269.1| Polyprenyl synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 263

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 23/215 (10%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVN---HLTALR 74
            L+ ++       +    + L  A RY +   GK +R  L+   +   +         L+
Sbjct: 11  ALERVVADLQEVGRDIKPESLRDAARYYIEKPGKMLRPILLLTFSYSLDRRSLMDPRVLQ 70

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               +E +H  SL+ DD+  MD    RRG  T  + Y +   ++A + L+  + +     
Sbjct: 71  AATIVELLHIVSLLQDDV--MDKHDERRGAKTPRVIYGDERTVLASDWLIAESIKRAVKL 128

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
             ++ + +              Q +  GQ LD++ E     ++      KT  L+     
Sbjct: 129 GEEVVEYL----------ADVAQRLSMGQALDLEGEREKAAEL------KTAPLIEATLV 172

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
             A++    ++  E  +  G +LG+++Q +DDL D
Sbjct: 173 LPALLLK-RRDVLELAKRLGASLGVLYQYSDDLSD 206


>gi|326468439|gb|EGD92448.1| geranylgeranyl pyrophosphate synthetase [Trichophyton tonsurans CBS
           112818]
 gi|326482590|gb|EGE06600.1| geranylgeranyl pyrophosphate synthetase [Trichophyton equinum CBS
           127.97]
          Length = 382

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IR  L+        V   +   +   +  +H  SL+ DD+   D+ ++RRG P  H
Sbjct: 80  PGKDIRGQLIAAYNRWLQVPEESLAVITKVVVMLHTASLLIDDVE--DSSHLRRGAPVAH 137

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A + I   K+    NI  + +++L    G+        L  +
Sbjct: 138 NIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLHRGQGM-------DLYWR 190

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D      E     +   KTG L   A +     +    +    +      +G++FQ+ DD
Sbjct: 191 DTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESSVPIDCVPLVD----LMGLMFQVCDD 246

Query: 227 LLDC 230
            L+ 
Sbjct: 247 YLNL 250


>gi|156098771|ref|XP_001615401.1| farnesyl pyrophosphate synthase [Plasmodium vivax SaI-1]
 gi|148804275|gb|EDL45674.1| farnesyl pyrophosphate synthase, putative [Plasmodium vivax]
          Length = 375

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 83/256 (32%), Gaps = 39/256 (15%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLF------NVNH 69
           D  L  L   +      +H  +    +  Y  LGGK  R  LV             +   
Sbjct: 25  DAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNRDINSSEW 84

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A  +   IE +    L+ DD+  MD G  RR K   ++  D  T     + LL Y   
Sbjct: 85  EKAACLAWCIEILQAAFLVADDI--MDKGETRRNKYCWYLLKDVETKNAVNDVLLLYN-S 141

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---------------LDIQDEFIDE 174
           I    +  L++      +++   +  L+ ++G  +               +D+ +  + E
Sbjct: 142 IYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPE 201

Query: 175 T-----------QVFMIQKMKTGAL-MCFACESGAIMAH--ASQNEKERLRCFGENLGII 220
                           I   KT           G ++A         +++      +G  
Sbjct: 202 QPVININMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEY 261

Query: 221 FQLADDLLDCEEDLPK 236
           FQ+ DD LD   D  K
Sbjct: 262 FQIHDDYLDIFGDSTK 277


>gi|182405|gb|AAA35820.1| farnesyl pyrophosphate synthetase [Homo sapiens]
          Length = 346

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 83/243 (34%), Gaps = 25/243 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSF-LVTECASLFNV 67
           Q+  +    I+  L      H +      RL   + Y  +GGK  R   +V     L   
Sbjct: 8   QDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEP 67

Query: 68  NHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAG 120
               A  +      G  +E +  + L+ DD+  MD+   RRG+   + +      AI   
Sbjct: 68  RKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICWYQKPGVGLDAINDA 125

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--------FI 172
           N L    + ++   K   ++      ++ L      Q  + GQ LD+             
Sbjct: 126 NLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLDLLTAPQGNVDLVRF 181

Query: 173 DETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDC 230
            E +   I K KT          +   MA    + E    +     +G  FQ+ DD LD 
Sbjct: 182 TEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDL 241

Query: 231 EED 233
             D
Sbjct: 242 FGD 244


>gi|238499299|ref|XP_002380884.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus
           flavus NRRL3357]
 gi|220692637|gb|EED48983.1| geranyl geranyl pyrophosphate synthase, putative [Aspergillus
           flavus NRRL3357]
          Length = 273

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 72/184 (39%), Gaps = 11/184 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IRS L+        V +     +   I+ +H  SL+ DD+   D+  +RRG P  H 
Sbjct: 16  GKDIRSKLIDAFNEFLEVPNDKLDVIKRIIDLLHNASLLIDDIQ--DSSTLRRGVPVAHS 73

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +  V  I   N     A   +++    L  +I ++ +L L    G+  +     L    
Sbjct: 74  IFGVVQIINLANYAYFVAQRELTNLTNPLSLSIYTEELLHLHRGQGM-ELHWRDTLQCP- 131

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
               E +   +   KTG L   A       + +  +    +      LG++FQ+ DD  +
Sbjct: 132 ---SEEEYIEMALDKTGGLFRLAIRLMQAESASGTDYVPLVET----LGLLFQIRDDYQN 184

Query: 230 CEED 233
            + D
Sbjct: 185 LQSD 188


>gi|118138423|pdb|2IHI|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
           Pyrophosphate Synthase (Pv092040)
 gi|118138424|pdb|2IHI|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
           Pyrophosphate Synthase (Pv092040)
 gi|118138425|pdb|2IHI|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
           Pyrophosphate Synthase (Pv092040)
 gi|118138426|pdb|2IHI|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
           Pyrophosphate Synthase (Pv092040)
 gi|294662582|pdb|3MAV|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
           Pyrophosphate Synthase (Pv092040)
 gi|294662583|pdb|3MAV|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
           Pyrophosphate Synthase (Pv092040)
 gi|294662584|pdb|3MAV|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
           Pyrophosphate Synthase (Pv092040)
 gi|294662585|pdb|3MAV|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Farnesyl
           Pyrophosphate Synthase (Pv092040)
          Length = 395

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 39/256 (15%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLF------NVNH 69
           D  L  L   +      +H  +    +  Y  LGGK  R  LV             +   
Sbjct: 45  DAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNRDINSSEW 104

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A  +   IE +    L+ DD+  MD G +RR K   ++  D  T     + LL Y   
Sbjct: 105 EKAACLAWCIEILQAAFLVADDI--MDKGEMRRNKYCWYLLKDVETKNAVNDVLLLYN-S 161

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---------------LDIQDEFIDE 174
           I    +  L++      +++   +  L+ ++G  +               +D+ +  + E
Sbjct: 162 IYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPE 221

Query: 175 T-----------QVFMIQKMKTGAL-MCFACESGAIMAH--ASQNEKERLRCFGENLGII 220
                           I   KT           G ++A         +++      +G  
Sbjct: 222 QPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEY 281

Query: 221 FQLADDLLDCEEDLPK 236
           FQ+ DD LD   D  K
Sbjct: 282 FQIHDDYLDIFGDSTK 297


>gi|330919993|ref|XP_003298844.1| hypothetical protein PTT_09671 [Pyrenophora teres f. teres 0-1]
 gi|311327775|gb|EFQ93059.1| hypothetical protein PTT_09671 [Pyrenophora teres f. teres 0-1]
          Length = 418

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 78/214 (36%), Gaps = 18/214 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +DL+    +         LL    Y L G  GK IRS  +        V       +   
Sbjct: 108 EDLIYGNGAAWTESKERILLGPYDY-LYGHPGKDIRSQCIAAFNLWLKVPPERLEVITKV 166

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +  +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A  ++ S     
Sbjct: 167 VGMLHTASLLVDDVE--DSSVLRRGIPVAHAIFGTPQTINSANYVYFRALSLLLSMNNPK 224

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESG 196
              I ++ +L+L    G+        L  +D      E     +   KTG L   A +  
Sbjct: 225 LIEIFTEELLNLHRGQGM-------DLYWRDSLTCPSEADYLEMVGNKTGGLFRLAIKLM 277

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +    +    +      +G++FQ+ DD L+ 
Sbjct: 278 QAESETDVDCAPLVST----IGLLFQILDDHLNL 307


>gi|119872063|ref|YP_930070.1| polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673471|gb|ABL87727.1| Polyprenyl synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 262

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 84/220 (38%), Gaps = 23/220 (10%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVN---H 69
           + I T L+ +     +  ++     L   IRY +   GK +R  L+   +   +      
Sbjct: 5   REILTALEQVRELLQNVGKSVEPRSLRDVIRYYIETPGKLLRPILLLTFSYSLDRKSIFE 64

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
              ++  A +E +H  SL+ DD+  MD    RRG  T    Y +  +I+A + ++  + +
Sbjct: 65  TKIIQAAAIVELLHIVSLLQDDV--MDKHDERRGVKTPRALYGDGRSIVASDWIIAESIK 122

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
                  ++ + +              Q +  GQ LD+  E           + KT  L+
Sbjct: 123 RALQLGPEVVEYL----------ADVAQRLSIGQALDLDGE------YKKAAEFKTAPLI 166

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                   I+    +   +     G  LGI++Q +DD  D
Sbjct: 167 EATLVLPIILLG-RRELFDTATKLGRLLGILYQYSDDYSD 205


>gi|152013432|sp|P0C565|CPPAS_TANCI RecName: Full=Chrysanthemyl diphosphate synthase, chloroplastic;
           Short=CPPase; Flags: Precursor
          Length = 395

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 89/250 (35%), Gaps = 23/250 (9%)

Query: 1   MNGGLPSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           +   L S L  +  +  +T+  +L+   +          +   I Y + GGK +R + V 
Sbjct: 50  LTTTLSSNLDSQFMQVYETLKSELIHDPSFEFDDDSRQWVERMIDYNVPGGKMVRGYSVV 109

Query: 60  ECASLFNVNHLTALRV--GAAI----ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +   L     LT        A+    E +  + L+ DD+  MD  + RRG+P      + 
Sbjct: 110 DSYQLLKGEELTEDEAFLACALGWCTEWLQAFILVLDDI--MDGSHTRRGQPCWFRLPEV 167

Query: 114 VT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              AI  G  L  +   I+          +    + + T        + GQM+D      
Sbjct: 168 GVVAINDGVLLRNHVHRILKKYFQGKPYYVHLLDLFNETE----FQTISGQMIDTICRLA 223

Query: 173 DETQV--------FMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
            +  +          I + K     C+       +M   +  +  +++     LG+ +Q+
Sbjct: 224 GQKDLSKYTMTLNRRIVQYKGSYYSCYLPIACALLMFGENLEDHVQVKDILVELGMYYQI 283

Query: 224 ADDLLDCEED 233
            +D LD   D
Sbjct: 284 QNDYLDTFGD 293


>gi|315047945|ref|XP_003173347.1| geranylgeranyl pyrophosphate synthetase [Arthroderma gypseum CBS
           118893]
 gi|311341314|gb|EFR00517.1| geranylgeranyl pyrophosphate synthetase [Arthroderma gypseum CBS
           118893]
          Length = 368

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 17/209 (8%)

Query: 26  QTASHMQTQHNDRL-LSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           + A  M T+  + + L    Y +   GK IR  L+        V   +   +   +  +H
Sbjct: 47  KPAEAMWTETKENIVLGPYSYMVNQPGKDIRGQLIAAYNRWLQVPEESLTVITKVVVMLH 106

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   D+ ++RRG P  H  +     I + N +   A E I   K     NI 
Sbjct: 107 TASLLIDDVE--DSSHLRRGAPVAHNIFGIPQTINSANYVYFLALEEIQKLKNPEAINIF 164

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAH 201
              +++L    GL        L  +D      E     +   KTG L   A +     + 
Sbjct: 165 VNELMNLHRGQGL-------DLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESS 217

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +    +      +G++FQ+ DD L+ 
Sbjct: 218 VPIDCVPLVD----LMGLMFQVCDDYLNL 242


>gi|221116455|ref|XP_002156744.1| PREDICTED: similar to Pdss1 protein, partial [Hydra magnipapillata]
          Length = 199

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 9/110 (8%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTA-------LRVGAAIECIHCYSLIHDDLPSMDN 97
           Y    GK  R  L+   A   NV+           L++    E IH  SL+HDD+  +D+
Sbjct: 87  YFDNEGKLFRPVLIVLMAKALNVHQQNTSDLLECQLKMAMIAEMIHTASLLHDDV--IDD 144

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
             +RR KP+V+  +    +I+AG+ +L  A  ++S  +        S+++
Sbjct: 145 AVLRRNKPSVNQIFSSKQSILAGDFILARASILLSRLQNTKVVEFFSEII 194


>gi|1346028|sp|P49351|FPPS1_LUPAL RecName: Full=Farnesyl pyrophosphate synthase 1; Short=FPP synthase
           1; Short=FPS 1; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 1; AltName:
           Full=Dimethylallyltranstransferase 1; AltName:
           Full=Farnesyl diphosphate synthase 1; AltName:
           Full=Geranyltranstransferase 1
 gi|558923|gb|AAA86687.1| farnesyl pyrophosphate synthase [Lupinus albus]
          Length = 342

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 80/227 (35%), Gaps = 21/227 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALR 74
           +LL   A          L   + Y + GGK  R   V +   L    H         A  
Sbjct: 18  ELLHDPAFEFSPDSRQWLDRMLDYNVPGGKLNRGLSVIDSYRLLKDGHELNDDEIFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P           I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGM-IAANDGVLLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   +       +L L + +       GQM+D+      E  +          I + KT 
Sbjct: 134 KKHFRGKPYYADLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                       +M   + +    ++    ++G  FQ+ DD LDC  
Sbjct: 193 YYSFYLPVACALLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDCFG 239


>gi|321261676|ref|XP_003195557.1| farnesyltranstransferase [Cryptococcus gattii WM276]
 gi|317462031|gb|ADV23770.1| Farnesyltranstransferase, putative [Cryptococcus gattii WM276]
          Length = 322

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 82/212 (38%), Gaps = 12/212 (5%)

Query: 27  TASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
                     + L+    Y +   GK+IRS L+        V+    + +   +  +H  
Sbjct: 11  ADPKWSDSQENILMEPYVYISQNPGKEIRSKLIDAFNLWLEVDKDDLVVITKVVRMLHNA 70

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   DN  +RRG P  H  Y     I   N +   AF+ +   ++ +    + +
Sbjct: 71  SLLMDDVE--DNSELRRGLPVAHTIYGVPQTINTANYVYFLAFQELLQLRSGVMGKGKDK 128

Query: 146 LM-LSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMA 200
            + L +  N  L  +  GQ +D+          E +   +   K G L+  A +   +MA
Sbjct: 129 EVDLVVAVNEELLQLHRGQGMDLFWRDSLTCPTEKEYIDMVLGKAGGLLRLAVKL--MMA 186

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  N           + + FQ+ DD ++ + 
Sbjct: 187 KSDSNV--NYVPLVNLISVWFQIRDDYMNLQS 216


>gi|167519034|ref|XP_001743857.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777819|gb|EDQ91435.1| predicted protein [Monosiga brevicollis MX1]
          Length = 346

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 86/250 (34%), Gaps = 18/250 (7%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M     + +    + +D I+  +  +   + +          + Y   GGK  R   V  
Sbjct: 1   MAADKEAFVDLFPRLVDEIIHGVEQEYPDYDKGAIA-WFRRVLEYNCPGGKMNRGLSVLT 59

Query: 61  CASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
                        +       +G  IE +  + L+ DD+  MD    RRG+P  + Q + 
Sbjct: 60  TFRHLVAPREPTDQEIEQCNILGWCIEWLQAFFLVADDI--MDGSVTRRGQPCWYKQENV 117

Query: 114 VTAIIAGNGLLTYA-FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
            T  I  + L+  A ++++          +    ++  T      G L   +   +D+ +
Sbjct: 118 GTVAINDSFLIEAAIYKLLKKHFKSTPVYVDLLELMLETTYQTELGQLLDLITAPEDQVV 177

Query: 173 ----DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADD 226
                  +   I K KT             ++A     +     +     +GI FQ+ DD
Sbjct: 178 LDRFTIEKHTNIVKYKTAFYSFYLPVAMAMLLAGVKDEQAFANAKDILLEMGIFFQVQDD 237

Query: 227 LLDCEEDLPK 236
            LDC  D PK
Sbjct: 238 YLDCYGD-PK 246


>gi|183448387|pdb|3CP6|A Chain A, Crystal Structure Of Human Farnesyl Diphosphate Synthase
           (T201a Mutant) Complexed With Mg And Biphosphonate
           Inhibitor
          Length = 376

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 89/258 (34%), Gaps = 32/258 (12%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 24  MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 83

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 84  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 141

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 142 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 197

Query: 167 IQDE--------FIDETQVFMIQKMKTGALMCFACESGAIMAHAS---QNEKERLRCFGE 215
           +              E +   I K K  A   F     A M  A    + E    +    
Sbjct: 198 LLTAPQGNVDLVRFTEKRYKSIVKYK-AAFYSFYLPIAAAMYMAGIDGEKEHANAKKILL 256

Query: 216 NLGIIFQLADDLLDCEED 233
            +G  FQ+ DD LD   D
Sbjct: 257 EMGEFFQIQDDYLDLFGD 274


>gi|312216572|emb|CBX96522.1| hypothetical protein [Leptosphaeria maculans]
          Length = 510

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 86/229 (37%), Gaps = 18/229 (7%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECAS 63
           P+ L   +  I  + +DL+         +    LL    Y L G  GK IRS  +     
Sbjct: 161 PTPLSPPADHIKDVGEDLIYGNGVAWTQEKERILLGPYDY-LYGHPGKDIRSQCIAAFNL 219

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
             +V       +   +  +H  SL+ DD+   D+  +RRG P  H  +     I + N +
Sbjct: 220 WLHVPAERLEIITRVVGMLHTASLLVDDVE--DSSLLRRGIPVAHSIFGIPQTINSANYV 277

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQ 181
              A + +   +     +I ++ +L+L    G+        L  +D      E     + 
Sbjct: 278 YFKALQHLLLMQNPKLVDIFTEELLNLHRGQGM-------DLYWRDSLTCPSEADYLEMV 330

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
             KTG L   A +     +    +    +      +G++FQ+ DD L+ 
Sbjct: 331 GNKTGGLFRLAIKLMQAESAVDVDCTPLVST----IGLLFQILDDHLNL 375


>gi|260103263|ref|ZP_05753500.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
           20075]
 gi|260082932|gb|EEW67052.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
           20075]
          Length = 92

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 46  ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           A  GGK +R  L+   A +    +   + + ++IE +H  +LIHDD  ++D+  +RRG  
Sbjct: 2   ADNGGKYLRPSLLLLAAHVVGKVNQQTINLASSIEILHMATLIHDD--TIDDSDLRRGNI 59

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
           ++  ++ +  A+ AGN L T  F+++    T+
Sbjct: 60  SIQAEFGKDVAVYAGNLLFTNFFDLMLDTTTE 91


>gi|291000304|ref|XP_002682719.1| predicted protein [Naegleria gruberi]
 gi|284096347|gb|EFC49975.1| predicted protein [Naegleria gruberi]
          Length = 310

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 77/214 (35%), Gaps = 29/214 (13%)

Query: 43  IRYALLGGKKIRSF------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           + Y +  GK  R        L+     +   +   A  +G  IE +  + LI DD+  MD
Sbjct: 1   LEYNVPHGKLNRGLAVVDTLLILNNYQISQEDFKLASILGWCIEFLQAFFLIADDI--MD 58

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
               RRG+P  +   D    + A N  L    +I    K   K+++   L+        +
Sbjct: 59  ASVTRRGQPCWYKLNDVK--MTACNDYLIVESQIYIILKKYFKNDLYVPLVDLFHQVSYM 116

Query: 157 QGMLGGQMLDIQD---------------EFIDETQVFMIQKMKTG-ALMCFACESGAIMA 200
             +  GQ+ D++                         +I K KT           G I++
Sbjct: 117 TEL--GQLHDLRSLPPNVDKNSSDEIPFHTFTIETYSLIVKYKTAFYSFYLPLYCGLILS 174

Query: 201 H-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               +N +++       +G  FQ+ DD LDC  D
Sbjct: 175 GKLDENIRKQTLDISIAMGEYFQIQDDYLDCYGD 208


>gi|170785230|pdb|3CC9|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Diphosphate
 gi|170785231|pdb|3CC9|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Diphosphate
 gi|170785232|pdb|3CC9|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Diphosphate
 gi|170785233|pdb|3CC9|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Diphosphate
 gi|215794781|pdb|3EZ3|A Chain A, Crystal Structure Of Plasmodium Vivax
           Geranylgeranylpyrophosphate Synthase Pvx_092040 With
           Zoledronate And Ipp Bound
 gi|215794782|pdb|3EZ3|B Chain B, Crystal Structure Of Plasmodium Vivax
           Geranylgeranylpyrophosphate Synthase Pvx_092040 With
           Zoledronate And Ipp Bound
 gi|215794783|pdb|3EZ3|C Chain C, Crystal Structure Of Plasmodium Vivax
           Geranylgeranylpyrophosphate Synthase Pvx_092040 With
           Zoledronate And Ipp Bound
 gi|215794784|pdb|3EZ3|D Chain D, Crystal Structure Of Plasmodium Vivax
           Geranylgeranylpyrophosphate Synthase Pvx_092040 With
           Zoledronate And Ipp Bound
 gi|298508704|pdb|3MYS|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Dipho
 gi|298508705|pdb|3MYS|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Dipho
 gi|298508706|pdb|3MYS|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Dipho
 gi|298508707|pdb|3MYS|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Dipho
 gi|312207872|pdb|3LDW|A Chain A, Crystal Structure Of Plasmodium Vivax
           Geranylgeranylpyrophosphate Synthase Pvx_092040 With
           Zoledronate And Ipp Bound
 gi|312207873|pdb|3LDW|B Chain B, Crystal Structure Of Plasmodium Vivax
           Geranylgeranylpyrophosphate Synthase Pvx_092040 With
           Zoledronate And Ipp Bound
 gi|312207874|pdb|3LDW|C Chain C, Crystal Structure Of Plasmodium Vivax
           Geranylgeranylpyrophosphate Synthase Pvx_092040 With
           Zoledronate And Ipp Bound
 gi|312207875|pdb|3LDW|D Chain D, Crystal Structure Of Plasmodium Vivax
           Geranylgeranylpyrophosphate Synthase Pvx_092040 With
           Zoledronate And Ipp Bound
 gi|312208197|pdb|3PH7|A Chain A, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Diphosphate
 gi|312208198|pdb|3PH7|B Chain B, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Diphosphate
 gi|312208199|pdb|3PH7|C Chain C, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Diphosphate
 gi|312208200|pdb|3PH7|D Chain D, Crystal Structure Of Plasmodium Vivax Putative Polyprenyl
           Pyrophosphate Synthase In Complex With Geranylgeranyl
           Diphosphate
          Length = 396

 Score = 94.1 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 39/256 (15%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLF------NVNH 69
           D  L  L   +      +H  +    +  Y  LGGK  R  LV             +   
Sbjct: 46  DAFLSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGILVILIYEYVKNRDINSSEW 105

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A  +   IE +    L+ DD+  MD G +RR K   ++  D  T     + LL Y   
Sbjct: 106 EKAACLAWCIEILQAAFLVADDI--MDKGEMRRNKYCWYLLKDVETKNAVNDVLLLYN-S 162

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM---------------LDIQDEFIDE 174
           I    +  L++      +++   +  L+ ++G  +               +D+ +  + E
Sbjct: 163 IYKLIEIYLRNESCYVDVIATFRDATLKTIIGQHLDTNIFSDKYSDAHREIDVNNINVPE 222

Query: 175 T-----------QVFMIQKMKTGAL-MCFACESGAIMAH--ASQNEKERLRCFGENLGII 220
                           I   KT           G ++A         +++      +G  
Sbjct: 223 QPVIDINMINFGVYKNIVIHKTAYYSFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEY 282

Query: 221 FQLADDLLDCEEDLPK 236
           FQ+ DD LD   D  K
Sbjct: 283 FQIHDDYLDIFGDSTK 298


>gi|157835943|pdb|2QIS|A Chain A, Crystal Structure Of Human Farnesyl Pyrophosphate Synthase
           T210s Mutant Bound To Risedronate
          Length = 374

 Score = 94.1 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 22  MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 81

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 82  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 139

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 140 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 195

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K K+          +   MA    + E    +     
Sbjct: 196 LLTAPQGNVDLVRFTEKRYKSIVKYKSAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 255

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 256 MGEFFQIQDDYLDLFGD 272


>gi|300705868|ref|XP_002995273.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01]
 gi|239604252|gb|EEQ81602.1| hypothetical protein NCER_101910 [Nosema ceranae BRL01]
          Length = 301

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +++LS I Y  +GGK  R+ L     S  N +   +L+     E +    ++ DD+  MD
Sbjct: 22  NKILSFITYNTVGGKGYRAELFNLIISDIN-STELSLKTSCVYELLQSAFIVADDV--MD 78

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
              IRRG    + +         G   L YA  +IS+    L+  +R +   S       
Sbjct: 79  ESLIRRGVECYYRKK--------GLICLKYAQYLISALGKYLR-MVRGENERSPLRATYY 129

Query: 157 QGM---LGGQMLDIQDEFIDE---TQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKER 209
             +     GQ+LD + +  +E        I + KT          SG + +   + E   
Sbjct: 130 NCILDTCLGQILDSKKKSKEEYSVELYNRIIEYKTAIYTFYLPLVSGYLFSG--RKEPSC 187

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPKK 237
           L  + + +G+IFQ+ DD L+   +L KK
Sbjct: 188 LYEYCKIIGMIFQMQDDYLNFFPELSKK 215


>gi|125527405|gb|EAY75519.1| hypothetical protein OsI_03423 [Oryza sativa Indica Group]
          Length = 392

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 72/212 (33%), Gaps = 27/212 (12%)

Query: 41  SAIRYALLGGKKIRSFLVTECASLFNV-------NHLTALRVGAAIECIHCYSLIHDDLP 93
             + Y +LGGK  R   V +   +              A  +G  IE +  Y L+ DD+ 
Sbjct: 87  KMLDYNVLGGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLVLDDI- 145

Query: 94  SMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
            MDN   RRG+P           A+  G  L  +   I+          +    + +   
Sbjct: 146 -MDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKPYYVDLIDLFNEVE 204

Query: 153 NIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEK 207
                G L   +   + E      + T    I + KT             +++       
Sbjct: 205 FKTASGQLLDLITTHEGEKDLAKYNLTVHRRIVQYKTAYYSFYLPVACALLLSG------ 258

Query: 208 ERLRCFG--ENL----GIIFQLADDLLDCEED 233
           E L  FG  +N+    G  FQ+ DD LDC  D
Sbjct: 259 ENLDNFGDVKNILVEMGTYFQVQDDYLDCYGD 290


>gi|50292709|ref|XP_448787.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528100|emb|CAG61757.1| unnamed protein product [Candida glabrata]
          Length = 351

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 28/249 (11%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
            +  Q+      +++ +L +    + M  +  +   S++ Y   GGK  R   V +  ++
Sbjct: 4   EASRQKFVDEFPSLVQELRVVLEGYGMPKEAIEWYESSLNYNTPGGKLNRGLSVVDTYAI 63

Query: 65  FNV----------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-E 113
                         +     +G  IE +  Y L+ DD+  MD    RRG+P  +   +  
Sbjct: 64  LKGYESVDDMKDDEYKKVALLGWCIELLQAYFLVADDM--MDKSITRRGQPCWYRVKNVN 121

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             AI     +L  A  ++   K   +++     +L L H++  Q  L GQ+LD+     D
Sbjct: 122 EIAINDA-FMLEAAIYVL--LKKHFRNDSYYVDLLELFHDVTFQTEL-GQLLDLITAPED 177

Query: 174 ETQVF--------MIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQL 223
              +          I   KT     +   + A+ A       + ++ +     LG  FQ+
Sbjct: 178 HVDLSKFSLSKHSFIVIFKTAYYSFYLPVALAMYAAGVNDSKDLKQAQDVLIPLGEYFQI 237

Query: 224 ADDLLDCEE 232
            DD LDC  
Sbjct: 238 QDDYLDCFG 246


>gi|13537421|dbj|BAB40665.1| farnesyl pyrophosphate synthase [Humulus lupulus]
 gi|13537423|dbj|BAB40666.1| farnesyl pyrophophate synthase [Humulus lupulus]
          Length = 342

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 84/246 (34%), Gaps = 24/246 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
            GL SK  E    + +   +LL   A          +   + Y + GGK  R   V +  
Sbjct: 2   SGLRSKFMEVYSILKS---ELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSY 58

Query: 63  SLFNVNHLTAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L                 +G  IE +  Y L+ DD+  MDN   RRG+P          
Sbjct: 59  QLLKGGKELTEEEIFLTSALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPKVGL 116

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
            I A +G+L     I    K   K       +L L + +       GQM+D+      E 
Sbjct: 117 -IAANDGILLRN-HIPRILKKHFKGKSYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEK 173

Query: 176 QV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            +          I + KT             +MA  + +    ++     +G  FQ+ DD
Sbjct: 174 DLSKYSIPLHHRIVQYKTAYYSFYLPVACALVMAGENLDNHVDVKNVLIEMGTYFQVQDD 233

Query: 227 LLDCEE 232
            LDC  
Sbjct: 234 YLDCFG 239


>gi|189198934|ref|XP_001935804.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187982903|gb|EDU48391.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 418

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 78/214 (36%), Gaps = 18/214 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +DL+    +         LL    Y L G  GK IRS  +        V       +   
Sbjct: 108 EDLIYGNGAAWTESKERILLGPYDY-LYGHPGKDIRSQCIAAFNLWLKVPPERLEVITKV 166

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +  +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A  ++ S     
Sbjct: 167 VGMLHTASLLVDDVE--DSSVLRRGIPVAHAIFGTPQTINSANYVYFRALSLLLSMSNPK 224

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESG 196
              I ++ +L+L    G+        L  +D      E     +   KTG L   A +  
Sbjct: 225 LIEIFTEELLNLHRGQGM-------DLYWRDSLTCPSEADYLEMVGNKTGGLFRLAIKLM 277

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +    +    +      +G++FQ+ DD L+ 
Sbjct: 278 QAESETDVDCAPLVST----IGLLFQILDDHLNL 307


>gi|218188900|gb|EEC71327.1| hypothetical protein OsI_03373 [Oryza sativa Indica Group]
          Length = 356

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 75/231 (32%), Gaps = 17/231 (7%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV-----NHLTA 72
           T+  +LL   +          L S + Y +LGGK  R   V E   +             
Sbjct: 26  TLKAELLKDPSFDFNDDAIQWLESMLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEE 85

Query: 73  LRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYA 127
           L +       IE +  Y L+ DD+  MDN   RRGKP           AI  G  L +  
Sbjct: 86  LFLACILGWGIEWLQAYFLVLDDI--MDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQI 143

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKM 183
             I           +    + +        G L  Q+   +        +      I + 
Sbjct: 144 SRIFRRYFCGKSYYVDLLDLFNEVEFQTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEY 203

Query: 184 KTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           KT             ++   S +   +++     +G+ FQ  DD LDC  +
Sbjct: 204 KTAYYSFYLPVACALLLFGESLDNYAQVKHILVEMGVYFQSQDDYLDCFGE 254


>gi|194752870|ref|XP_001958742.1| GF12410 [Drosophila ananassae]
 gi|190620040|gb|EDV35564.1| GF12410 [Drosophila ananassae]
          Length = 417

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 75/227 (33%), Gaps = 15/227 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ D+   T ++            ++Y +  GKK R  L             L   N  
Sbjct: 91  DLVRDITSVTKAYNCNDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 150

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+   H       TAI     +    + 
Sbjct: 151 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQLCWHKVEGVGLTAINDALMIENAMYA 208

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGAL 188
           I+    + L   +    +      I   G    Q+   ++           I + KT   
Sbjct: 209 ILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRNVSEFTMENYKAIVENKTAY- 267

Query: 189 MCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
             F       +  A   + E  R        +G  FQ+ DD LDC  
Sbjct: 268 YTFYLPFAVALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFG 314


>gi|327300343|ref|XP_003234864.1| geranylgeranyl pyrophosphate synthetase [Trichophyton rubrum CBS
           118892]
 gi|326462216|gb|EGD87669.1| geranylgeranyl pyrophosphate synthetase [Trichophyton rubrum CBS
           118892]
          Length = 382

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK +R  L+        V   +   +   +  +H  SL+ DD+   D+ ++RRG P  H
Sbjct: 80  PGKDVRGQLIAAYNRWLQVPEESLAVITKVVVMLHTASLLIDDVE--DSSHLRRGAPVAH 137

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A + I   K+    NI  + +++L    G+        L  +
Sbjct: 138 NIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLHRGQGM-------DLYWR 190

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D      E     +   KTG L   A +     +    +    +      +G++FQ+ DD
Sbjct: 191 DTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESSVPIDCVPLVD----LMGLMFQVCDD 246

Query: 227 LLDC 230
            L+ 
Sbjct: 247 YLNL 250


>gi|296818379|ref|XP_002849526.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
 gi|238839979|gb|EEQ29641.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
          Length = 366

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 73/214 (34%), Gaps = 11/214 (5%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D +  + +      +   +     Y A L GK+IR  L+        V+  +   +   I
Sbjct: 58  DSIDSKLSMEWSPTNERAIREPYDYIAALPGKEIRRKLLDAFNVWLKVDEESCEIIARTI 117

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
              H  SL+ DD+   DN  +RRG PT H  Y     I A N +   A + +   K   +
Sbjct: 118 TMAHNASLMIDDIQ--DNSQLRRGVPTAHRVYGIAQTINAANYVYFQAQQELMRLKNWPQ 175

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
                   L   H      +          E         +   KTG L         ++
Sbjct: 176 ALAIFNDELINLHRGQGMELFWRDNFQPPSEG----DYLQMIANKTGGLFRLILR---LL 228

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             AS    + +      +G+ FQ+ DD  +  +D
Sbjct: 229 QCASTRVVD-ITPLANVVGLFFQILDDYKNMVDD 261


>gi|165934064|gb|ABY74558.1| farnesyl diphosphate synthase (predicted) [Callithrix jacchus]
          Length = 353

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 81/253 (32%), Gaps = 22/253 (8%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+       I+  L      H +T     RL   + Y  +GGK  R
Sbjct: 1   MNGDQKSDVYAQEKQDFVHHFSEIVRVLTEDEMEHPETGDAIARLKEVLEYNAIGGKYHR 60

Query: 55  SFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
             +V                    AL VG  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLMVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI     L    + ++     +    +    +   +      G     +  
Sbjct: 119 YQKPGVGLDAINDAVLLEACVYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTPDFITA 178

Query: 167 IQD----EFIDETQVFMIQKMK-TGALMCFACESGAIMAHAS-QNEKERLRCFGENLGII 220
            QD    +   E +   I K K           +   MA    + E          +G  
Sbjct: 179 PQDNVDLDRFTEKRYKSIVKYKMAFYSFYLPVAAAMYMAGIDGEKEHANANEILLEMGEF 238

Query: 221 FQLADDLLDCEED 233
           FQ+ DD LD   D
Sbjct: 239 FQIQDDYLDLFGD 251


>gi|242212676|ref|XP_002472170.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728728|gb|EED82616.1| predicted protein [Postia placenta Mad-698-R]
          Length = 328

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 89/226 (39%), Gaps = 27/226 (11%)

Query: 24  LLQTASHMQTQHNDRLLSAIRY--ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           +L  ++    ++   LL    +  ++  GK+IR  ++    +   V     + +   I  
Sbjct: 12  ILSESAAWSERNEMALLEPFNHINSVR-GKEIRGLMLEAFNAWLEVPKDKLMIISRVISM 70

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK-- 139
           +H  SL+ DD+   D+  +RRG P  H  Y     I + N     A++ + + ++ +   
Sbjct: 71  LHTASLLIDDIE--DDAQLRRGVPASHKIYGIPQTINSANYAYFLAYQELFTLRSGVDSG 128

Query: 140 -------------DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
                        D + +  +LSL    GL+ +    +         E +   +   KTG
Sbjct: 129 DSEPHRLIPFRQLDRVVTAELLSLHRGQGLELLWRDSLQCP-----TEEEYVAMVNNKTG 183

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            L   A +   +MA +++N            G+ +Q+ DD ++ + 
Sbjct: 184 GLFRVAIKL--MMACSTKNIDVDYVPLVNLFGVYYQIRDDYMNLQS 227


>gi|38684029|gb|AAR27053.1| farnesyl diphosphate synthetase [Ginkgo biloba]
          Length = 390

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 75/228 (32%), Gaps = 21/228 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR------- 74
            +L  +A          +   + Y + GGK  R   V +   L                 
Sbjct: 66  QILNDSAFQCTDDARQWIEKMLDYTVPGGKLNRGLSVIDSYRLLKTGKEITEDEVFLGCV 125

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD  + RRG+P           I A +G+L      IS  
Sbjct: 126 LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRLPQVGL-IAANDGILLR--THISRI 180

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFIDET-----QVFMIQKMKTG 186
                      + L    N        GQMLD     +  ID           I + KT 
Sbjct: 181 LKLHFQTKPYYVDLCDLFNEVEFQTASGQMLDLITTHEGAIDLAKYKMPTYLRIVQYKTA 240

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       +MA  + +    ++     +G  FQ+ DD LDC  D
Sbjct: 241 YYSFYLPVACALLMAGENLDNFVAVKNILVQMGTYFQVQDDYLDCFGD 288


>gi|68165941|gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]
          Length = 342

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 85/243 (34%), Gaps = 22/243 (9%)

Query: 7   SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           S L+     + ++L  +LL   A          +   + Y + GGK  R   V +   L 
Sbjct: 2   SDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61

Query: 66  NVNHLTAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 +         +G  IE +  Y L+ DD+  MD+ + RRG+P           I 
Sbjct: 62  KEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGM-IA 118

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
             +G+L     I    K   +       +L L + +       GQM+D+    + E  + 
Sbjct: 119 VNDGILLRN-HIPRILKKHFRQKPYYVDLLDLFNEVE-FQTASGQMIDLITTLVGEKDLS 176

Query: 178 -------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                    I + KT             +M+     +   ++     +G  FQ+ DD LD
Sbjct: 177 KYSLPIHRRIVQYKTAYYSFYLPVACALLMSGEDLEKHTNVKDILIEMGTYFQVQDDYLD 236

Query: 230 CEE 232
           C  
Sbjct: 237 CFG 239


>gi|302548937|ref|ZP_07301279.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
 gi|302466555|gb|EFL29648.1| polyprenyl diphosphate synthase [Streptomyces viridochromogenes DSM
           40736]
          Length = 381

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 78/205 (38%), Gaps = 34/205 (16%)

Query: 57  LVTECASLFNV----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI--- 109
           L+                 AL  GAA+E +   +L+HDDL  MD    RRG+P +H    
Sbjct: 50  LLWWSLRACGGGTPAQVRAALHAGAAVELLQTCALVHDDL--MDAATTRRGRPALHTAVA 107

Query: 110 ------------QYDEVTAIIAGNGLLTYAFEIISSPKT-----QLKDNIRSQLMLSLTH 152
                       +  E  A++AG+  L +A ++++           +   R + +   T 
Sbjct: 108 RQYGDIPRGAARRLGEAAAVLAGDLALAWADDVMTDLLLDGDDLPPEAPARVRDIWRGTR 167

Query: 153 NIGLQGMLGGQMLDIQDEFI---DETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKE 208
                  + GQ LDIQ +        +      +K+    +      GA +A A Q   +
Sbjct: 168 T----ETIAGQYLDIQGQATGQPTPARALRAACLKSALYTVERPLALGAALAGAGQEATQ 223

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L   G   G+ FQL DDL D   D
Sbjct: 224 ALCRAGRCAGLAFQLRDDLDDLFAD 248


>gi|4680193|gb|AAD27558.1|AF111710_4 putative farnesyl pyrophosphate synthase [Oryza sativa Indica
           Group]
          Length = 495

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 90/249 (36%), Gaps = 43/249 (17%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLG-------GKKIRSFLVTECASLFNV--- 67
             +D ++L + S   +   DR+  + R    G       GK  R   V +   L      
Sbjct: 160 QWIDRVMLFSPSPFSSCVADRMCFSSRIVSSGFSVGFRSGKCNRGLSVVDSYKLLKGTNV 219

Query: 68  ----NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNG 122
               +   A  +G  +E +  Y L+ DD+  MD+ + RRG+P           AI  G  
Sbjct: 220 LSQEDMFLASTLGWCVEWLQAYFLVLDDI--MDDSHTRRGQPCWFRVPQVGSIAINDGII 277

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----- 177
           L  +   ++   +   +  +    +L L + +       GQ+LD+      E  +     
Sbjct: 278 LRNHITRML---RLHFRGKLYYADLLDLFNEVE-FKTASGQLLDLITTHEGEKDLNKYNI 333

Query: 178 ---FMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGE------NLGIIFQLADDL 227
                I + KT             +++       E L  +G        +GI FQ+ DD 
Sbjct: 334 GVHRRIVQYKTSYYSFYLPVACALLLSG------EDLTKYGAVEDILVKMGIYFQVQDDY 387

Query: 228 LDCEEDLPK 236
           LDC  D PK
Sbjct: 388 LDCYGD-PK 395


>gi|83772569|dbj|BAE62697.1| unnamed protein product [Aspergillus oryzae]
          Length = 310

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 83/221 (37%), Gaps = 18/221 (8%)

Query: 14  KRIDTILDDL-LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA 72
           + ++  L D  L +    + T   D L          GK IR+ L+        V +   
Sbjct: 2   QALEAWLRDRGLQEAFEKILTGPLDYLRE------NPGKDIRAKLIDAFNEFLEVPNDKL 55

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +   I+ +H  SL+ DD+ +  +  +RRG P  H  +     I + N     A   ++
Sbjct: 56  DVIKRIIDLLHNASLLIDDIQN--SSTLRRGVPVAHSIFGVAQTINSANYAYFIAQRELT 113

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +    L  +I ++ ++ L    G+   L  +          E +   +   KTG L   A
Sbjct: 114 NLTNPLSFSIYTEELIHLHRGQGM--ELHWRDTMQCP---SEVEYIEMALDKTGGLFRLA 168

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                  + +  +    +      LG++FQ+ DD  + + D
Sbjct: 169 IRLMQAESASGTDYVPLVET----LGLLFQIRDDYQNLQSD 205


>gi|300079894|gb|ADJ67472.1| farnesyl pyrophosphate synthase [Artemisia annua]
          Length = 343

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 90/248 (36%), Gaps = 24/248 (9%)

Query: 1   MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           M+   L SK     K  DT+  +L+   A          +   + Y + GGK  R   V 
Sbjct: 1   MSSIDLKSKF---LKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNIPGGKLNRGLSVV 57

Query: 60  ECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +   L     L+      +  +G  IE +  Y L+ DD+  MD  + RRG+P        
Sbjct: 58  DSYQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPCWFRLLKV 115

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
              I A +G+L     +    K   +     + ++ L + +       GQM+D+    + 
Sbjct: 116 GM-IAANDGILLRN-HVPRILKKHFRGKPYYEDLVDLFNEVE-FQTASGQMIDLITTLVG 172

Query: 174 ETQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E  +          I + KT             +M     ++   ++     +G  FQ+ 
Sbjct: 173 EKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQ 232

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 233 DDYLDCFG 240


>gi|294882140|ref|XP_002769627.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239873179|gb|EER02345.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 377

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 97/259 (37%), Gaps = 34/259 (13%)

Query: 6   PSKLQ-ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAI--------RYALL-GGKKIRS 55
           P+KL+ +  K   +  DD+L    + +    ++ L  +I         Y    GGK  R+
Sbjct: 14  PTKLRNDVIKAFPSFKDDILADINNRLTVSSSNTLRDSIINYFDTCIEYTTKDGGKLNRA 73

Query: 56  FLVTECASLFNVN----------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
             +     + + +             AL++   +E +  + L  DD+  MD+   RRGKP
Sbjct: 74  TSLVAAYDILHHHHHDDDQHDDDRDIALKLAWCVEILQSHFLTLDDV--MDSSSTRRGKP 131

Query: 106 TVHIQYDEVTAIIAGNGLLTYAF---EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
             + +     AI  G  L +  +     I+S K  L D I     +     IG    + G
Sbjct: 132 CWYTKVGVSNAINDGAFLYSTIYPFIRNIASHKEWLLDVIDIFAHIEQCTLIGQHLDVNG 191

Query: 163 QMLDIQ---DEFIDETQVFM---IQKMKTGALMCFACESGAIMAHASQNEKERL---RCF 213
            M   Q    E   E ++     I   KT     +   S  + A   ++  + L   +  
Sbjct: 192 GMQQQQQQDSEHNKEKEIERFNTIALYKTAFYTYYLPASVGVFASDDKDAVKYLPLIKDV 251

Query: 214 GENLGIIFQLADDLLDCEE 232
              LG+ FQ  DD LDC  
Sbjct: 252 CLKLGVYFQAQDDFLDCYA 270


>gi|255642257|gb|ACU21393.1| unknown [Glycine max]
          Length = 342

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 80/228 (35%), Gaps = 21/228 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALR 74
           +LL   A        + +   + Y + GGK  R   V +   L        +     A  
Sbjct: 18  ELLHDPAFEFSDDARNWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFHASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P           I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGM-IAANDGVLLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   +       +L L + +       GQM+D+      E  +          I + KT 
Sbjct: 134 KKHFRGKPYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYTLTLHRRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       +MA    +    ++     +G  FQ+ DD LD   D
Sbjct: 193 YYSFYLPVACALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDRFGD 240


>gi|194884015|ref|XP_001976091.1| GG22668 [Drosophila erecta]
 gi|190659278|gb|EDV56491.1| GG22668 [Drosophila erecta]
          Length = 419

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 80/231 (34%), Gaps = 23/231 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ D+     ++  +        A++Y +  GKK R  L             L   N  
Sbjct: 93  DLVRDVTTVAKAYNCSDAAKWFAQALQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 152

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+P  H   +   TAI     +    + 
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDV--MDNSITRRGQPCWHKLENVGMTAINDSLMIENAMYA 210

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDE---TQVFMIQKMK 184
           I+    + L   +    +      I       GQ LD    +  + E        I + K
Sbjct: 211 ILKKHFSHLDCYVALMELFHEITFITTC----GQSLDLLHSNRSVSEFTMENYKAIVENK 266

Query: 185 TGALMCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
           T     F       +  A   + E  R        +G  FQ+ DD LDC  
Sbjct: 267 TAY-YSFYLPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFG 316


>gi|261399278|dbj|BAI44849.1| fusicoccadiene synthase [Alternaria brassicicola]
          Length = 697

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 64/186 (34%), Gaps = 15/186 (8%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K  R   +       +V+   A +V  AI  +H  SL+ DD+   D   +RR KP+ H  
Sbjct: 416 KGTRDMFLDALNHWLHVDEQRASQVKMAIRMLHNASLMLDDVQ--DGSRLRRSKPSAHRV 473

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +       +   L+  + ++I             + + S         +  GQ  D+   
Sbjct: 474 FGVAQTTNSAAFLVNESIKLIRELAGDQGVAAVLEKLTS---------LFVGQAQDLHSS 524

Query: 171 FI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                   T+       KT AL   A     + + A+      L  F   LG  FQ+ DD
Sbjct: 525 RNLSPPSLTEYIQTIDQKTSALFELASRLMCLCSTATVVPNSSLSRFCILLGRFFQIRDD 584

Query: 227 LLDCEE 232
             +   
Sbjct: 585 YQNLTS 590


>gi|242774766|ref|XP_002478507.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC
           10500]
 gi|218722126|gb|EED21544.1| geranylgeranyl diphosphate synthase [Talaromyces stipitatus ATCC
           10500]
          Length = 392

 Score = 93.3 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IR  ++    +   V   +   +   +  +H  SL+ DD+   DN  +RRG P  H
Sbjct: 99  PGKDIRKQMIAAFNAWLKVPESSLAIITKVVAMLHNASLLIDDVE--DNSVLRRGIPVAH 156

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A + +    +    +I ++ +L+L    G+        L  +
Sbjct: 157 NIFGTAQTINSANYVYFLALQEVRKLNSVTAMDIYTEELLNLHKGQGM-------DLFWR 209

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D      E +   +   KTG L   A +     +  +  +   L      +G+IFQ+ DD
Sbjct: 210 DTLTCPTEEEYLEMVDNKTGGLFRLAVKLMQAESD-TGRDCVPLVNV---MGLIFQICDD 265

Query: 227 LLDC 230
            L+ 
Sbjct: 266 YLNL 269


>gi|291449974|ref|ZP_06589364.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
 gi|291352923|gb|EFE79825.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 435

 Score = 93.3 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 22/192 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF----NVNHLTAL 73
           T+L + L +  +       D      R+  LGG+++R  L+                 AL
Sbjct: 96  TLLAERLSEACATDPVSGRDIAERIARFTSLGGRRLRPALLWWALRACALPDGDRARAAL 155

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------QYDEVTAIIAGN 121
           RVGAA+E +   +L+HDD+  MD+  +RRG+P +H+             +    A++AG+
Sbjct: 156 RVGAAVELLQTCALVHDDV--MDSSRLRRGRPALHVSLADQYGAAGTDLFAGAAAVLAGD 213

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
             L +A + ++   T+L D +R ++        G   M+ GQ LD+  +   +    +  
Sbjct: 214 LALAWAEDTLAE--TELPDPVRRRVRAVWRVMRG--EMVAGQYLDLHGQVTADRSALLAL 269

Query: 182 KMKTGALMCFAC 193
           +        ++ 
Sbjct: 270 RTARLKSAQYSA 281


>gi|6681694|dbj|BAA88844.1| Farnesyl pyrophosphate synthase [Gentiana lutea]
 gi|193795398|gb|ACF21779.1| farnesyl pyrophosphate synthase [Gentiana lutea]
          Length = 349

 Score = 93.3 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 81/232 (34%), Gaps = 23/232 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALR 74
           +LL   A          +   + Y + GGK  R   V +                  A  
Sbjct: 25  ELLNDLAFEWSPDSRQWVERMLDYNVPGGKLNRGLSVIDSYEQLKEGKELTKDEVFLASA 84

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MD  + RR +P           A+  G  L  +   I+  
Sbjct: 85  LGWCIEWLQAYFLVLDDI--MDGSHTRRSQPCWFRLPKVGMIAVNDGVLLRNHIPRIL-- 140

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   ++      +L L + +       GQM+D+      E  +          I + KT
Sbjct: 141 -KKHFREKPYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYSLSLHRRIVQYKT 198

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                        +MA  + +    ++    ++GI FQ+ DD LDC  +  K
Sbjct: 199 AYYSFYLPVACALLMAGENLDNYVDVKNVLIDMGIYFQVQDDYLDCFGEPEK 250


>gi|322710216|gb|EFZ01791.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae ARSEF
           23]
          Length = 431

 Score = 93.3 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 78/215 (36%), Gaps = 15/215 (6%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DL               + +   Y A   GK  RS L+    +L  V       +  A+
Sbjct: 124 EDLNFTPKRSWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITKAV 183

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +        
Sbjct: 184 GMLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSI 241

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
            ++ +  ++SL    G+        L  +D      E     +   KTG L     +   
Sbjct: 242 ISVFADELVSLHRGQGM-------DLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQ 294

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + +S  +   L      +G+IFQ+ DD ++   
Sbjct: 295 AESPSSSLDCVPLVNL---IGLIFQIRDDYMNLSS 326


>gi|195402409|ref|XP_002059798.1| GJ15042 [Drosophila virilis]
 gi|194140664|gb|EDW57135.1| GJ15042 [Drosophila virilis]
          Length = 415

 Score = 92.9 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 80/231 (34%), Gaps = 23/231 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNHL 70
            ++ DL   T ++  +         ++Y +  GKK R  L             L   N  
Sbjct: 89  DVVRDLTNATKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAEELTPENIK 148

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+   H   +   TAI     +    + 
Sbjct: 149 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQKCWHKVENVGLTAINDALMIENAMYA 206

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
           I+    + L   +    ++ L H I       GQ LD+ +               I   K
Sbjct: 207 ILKQHFSHLDCYVA---LMELFHEIAYITTC-GQSLDLLNSHKRVSEFTMENYKAIVDNK 262

Query: 185 TGALMCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
           T     F       M  A   + E  R        +G  FQ+ DD LDC  
Sbjct: 263 TAY-YSFYLPFALAMHLAGYKDAEAFRQSKTILLEMGHFFQVQDDFLDCFG 312


>gi|322499090|emb|CBZ34162.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 362

 Score = 92.9 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 97/265 (36%), Gaps = 37/265 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASL 64
           + ++   K  + + + LL       +   + +  L S +    LGGK  R   V + A  
Sbjct: 2   AHMERFQKVYEEVQEFLLGDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEA 61

Query: 65  FNVNH-------LTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
              +           L         IE +  + L+ DD+  MD+   RRGKP  ++    
Sbjct: 62  MAKDTKMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDI--MDHSKTRRGKPCWYLHPGV 119

Query: 114 VT--AIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIG----LQGMLGGQM 164
            T  AI  G  LL +A ++     + +  L + +R    + LT  IG    +  M+    
Sbjct: 120 TTQVAINDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAK 179

Query: 165 LDIQDEFIDETQVF--------MIQKMKTG-ALMCFACESGAIMAHASQN-EKERLRCFG 214
           LD      + T            I   KT           G +++   +  +KE      
Sbjct: 180 LDANVAHANTTDYIEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVA 239

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
             +G  FQ+ DD++DC    E L K
Sbjct: 240 MVMGEYFQVQDDVMDCFTPPEKLGK 264


>gi|115461042|ref|NP_001054121.1| Os04g0657100 [Oryza sativa Japonica Group]
 gi|113565692|dbj|BAF16035.1| Os04g0657100 [Oryza sativa Japonica Group]
 gi|215704288|dbj|BAG93128.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629693|gb|EEE61825.1| hypothetical protein OsJ_16465 [Oryza sativa Japonica Group]
          Length = 392

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 92/248 (37%), Gaps = 21/248 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + G+    +   +    + DDL+   +  +  +    L   I Y + GGK  R   V + 
Sbjct: 48  DHGIVDARERFVQAYGRLRDDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDS 107

Query: 62  ASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L          +   A  +G  +E     +L+ DD+  MD+ + RR +   + + +  
Sbjct: 108 YLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLDDI--MDDSHTRRDQICWYRRPEVG 165

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
                 +G++     I+   K   ++      +L +   I LQ  L GQMLD+       
Sbjct: 166 LR-GINDGIILKC-HILIMIKKYFREKPYFLDILEIWSEIALQTSL-GQMLDLISTHTGA 222

Query: 175 TQ--------VFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                        I K KT          +  +++ A   +   L+     +GI FQ+ D
Sbjct: 223 DDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLEDFSGLKDILIEMGIYFQIQD 282

Query: 226 DLLDCEED 233
           D LDC  D
Sbjct: 283 DYLDCFAD 290


>gi|14573639|gb|AAK68152.1| farnesyldiphosphate synthase [x Citrofortunella microcarpa]
          Length = 341

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 82/226 (36%), Gaps = 20/226 (8%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------NVNHLTALRV 75
           +LL   A          +   + Y + GGK  R   V +   L       +     +  +
Sbjct: 18  ELLYDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKTTDDEFFLSSAL 77

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  IE +  Y L+ DD+  MD  + RRG+P           I A +G+L     I    K
Sbjct: 78  GWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGM-IAANDGVLLRN-HISRILK 133

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGA 187
              +D      +L L + +       GQM+D+      E  +          I + KT  
Sbjct: 134 NHFRDKPYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEKDLSKYSLPLHRRIVQYKTAY 192

Query: 188 L-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                      +MA  + ++   ++     +GI FQ+ DD LDC  
Sbjct: 193 YSFYLPVACALLMAGENLDKHVEVKDILVQMGIYFQVQDDFLDCFG 238


>gi|59709779|gb|AAW88517.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
 gi|170674503|gb|ACB30137.1| geranylgeranyl diphosphate synthase [Epichloe festucae]
          Length = 465

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 17/213 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L  T     T   ++++ A    + G  GK  RS L++   +   V       +  A+  
Sbjct: 162 LNYTPQRSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAVGM 221

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +          
Sbjct: 222 LHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQEVQKLGNPPLIG 279

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIM 199
           I +  +++L    G+        L  +D      E     +   KTG L     +     
Sbjct: 280 IFADELVNLHRGQGM-------DLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQAE 332

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + A+ +    +      +G+IFQ+ DD L+   
Sbjct: 333 SAAAVDCVPLV----NLIGLIFQIRDDYLNLSS 361


>gi|59709773|gb|AAW88513.1| geranylgeranyl diphosphate synthase [Neotyphodium lolii]
          Length = 466

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 17/213 (7%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
           L  T     T   ++++ A    + G  GK  RS L++   +   V       +  A+  
Sbjct: 163 LNYTPQRSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAVGM 222

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +          
Sbjct: 223 LHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQEVQKLGNPPLIG 280

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIM 199
           I +  +++L    G+        L  +D      E     +   KTG L     +     
Sbjct: 281 IFADELVNLHRGQGM-------DLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQAE 333

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + A+ +    +      +G+IFQ+ DD L+   
Sbjct: 334 SAAAVDCVPLV----NLIGLIFQIRDDYLNLSS 362


>gi|4324960|gb|AAD17204.1| farnesyl diphosphate synthase [Artemisia annua]
          Length = 343

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 89/248 (35%), Gaps = 24/248 (9%)

Query: 1   MNG-GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           M+   L SK     K  DT+  +L+   A          +   + Y + GGK  R   V 
Sbjct: 1   MSSIDLKSKF---LKVYDTLKSELINDPAFEFDDDSRQWIEKMLDYNVPGGKLNRGLSVV 57

Query: 60  ECASLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           +   L     L+      +  +G  IE +  Y L+ DD+  MD  + RRG+P        
Sbjct: 58  DSYQLLKGGELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDESHTRRGQPCWFRLLKV 115

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
              I A +G+L     +    K   +       ++ L + +       GQM+D+    + 
Sbjct: 116 GM-IAANDGILLRN-HVPRILKKHFRGKPYYVDLVDLFNEVE-FQTASGQMIDLITTLVG 172

Query: 174 ETQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           E  +          I + KT             +M     ++   ++     +G  FQ+ 
Sbjct: 173 EKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNMLVEMGTYFQVQ 232

Query: 225 DDLLDCEE 232
           DD LDC  
Sbjct: 233 DDYLDCFG 240


>gi|307211217|gb|EFN87417.1| Geranylgeranyl pyrophosphate synthetase [Harpegnathos saltator]
          Length = 324

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
             + + +LL  + Y L   GK  R+ L         + +     +   +  +H  S+I D
Sbjct: 20  DMEEDRKLLEPMSYMLRTPGKAYRTTLAKAVNYWLRIPNDKLEDIIEIVNILHTSSIILD 79

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   DN  +RRG P  H  Y       A N  +  A E   + +      + ++ +L L
Sbjct: 80  DIE--DNAVLRRGIPVAHSVYGIAHTTNAANYGMIIALERTLALQHPDAVKVFTEQLLEL 137

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM--KTGALMCFACESGAIMAHASQNEKE 208
               G         +  +D  I  T++     +  KTG L         +     +N   
Sbjct: 138 HRGQGS-------DIYWRDNHICPTELEYKITVVRKTGGLFKLLVRLMQLFTKFEENVAP 190

Query: 209 RLRCFGENLGIIFQLADDL 227
                 + LG +FQ+ DD 
Sbjct: 191 ----LADMLGYLFQIRDDY 205


>gi|217074292|gb|ACJ85506.1| unknown [Medicago truncatula]
          Length = 146

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)

Query: 158 GMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G++ GQ++DI  E + +    ++  I   KT AL+  A   GAI+   S  + E+LR F 
Sbjct: 2   GLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFA 61

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
             +G++FQ+ DD+LD     ++L K
Sbjct: 62  TYIGLLFQVVDDILDVTKSSQELGK 86


>gi|219666168|ref|YP_002456603.1| geranylgeranyl pyrophosphate synthase-like protein
           [Desulfitobacterium hafniense DCB-2]
 gi|219536428|gb|ACL18167.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 318

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 12/175 (6%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L          +   AL     +E       I DD+   DN  +         Q  +  A
Sbjct: 49  LTRMSCECAGGDPEDALPGAIGMEFFALALDIFDDVQDQDNENMP------WRQLPDAQA 102

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174
           I     LL  + E IS+    + DN   + + +  H  G+    G     I D+   +  
Sbjct: 103 INLAICLLMLSDEAISA----IPDNRLFREVAATLHRTGICASNGQFREFIYDDRQQVSF 158

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            Q F +   K G+L   AC+ GAI+  A +     L  FG NLGI+ Q+ +DL D
Sbjct: 159 EQYFEMAGQKAGSLTACACKIGAILGGAEEPVIHGLEQFGINLGILNQIRNDLND 213


>gi|14279425|gb|AAK58594.1|AF268889_1 farnesyl pyrophosphate synthase [Humulus lupulus]
          Length = 342

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 77/227 (33%), Gaps = 21/227 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL-------R 74
           +LL   A          +   + Y + GGK  R   V +   L                 
Sbjct: 18  ELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYQLLKGGKELTEEEIFLTSA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN   RRG+P           I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRVPKVGL-IAANDGILLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   K       +L L + +       GQM+D+      E  +          I + KT 
Sbjct: 134 KKHFKGKSYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEKDLSKYSIPLHHRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                       +MA  + +    ++     +G  FQ+ DD LDC  
Sbjct: 193 YYSFYLPVACALVMAGENLDNHVDVKNVLIEMGTYFQVQDDYLDCFG 239


>gi|291585672|gb|ADE18770.1| farnesyl-diphosphate synthase [Glycyrrhiza uralensis]
 gi|291585674|gb|ADE18771.1| farnesyl-diphosphate synthase [Glycyrrhiza uralensis]
          Length = 342

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 80/228 (35%), Gaps = 21/228 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALR 74
           +LL   A              + Y + GGK  R   V +   L        +     A  
Sbjct: 18  ELLHDPAFEWSDDSRQWADRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDELFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + RRG+P           I A +G+L     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGM-IAANDGVLLRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           +   +       +L L + +       GQM+D+      E  +          I + KT 
Sbjct: 134 RKHFRGKPYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                       +M   + +    ++    ++G  FQ+ DD LDC  D
Sbjct: 193 YYSFYLPVACALLMMGENLDNHIDVKNILVDMGTYFQVQDDYLDCFGD 240


>gi|112363472|gb|ABI16061.1| farnesyl pyrophosphate synthase [Leishmania donovani]
          Length = 362

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 97/265 (36%), Gaps = 37/265 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASL 64
           + ++   K  + + + LL       +   + +  L S +    LGGK  R   V + A  
Sbjct: 2   AHMERFQKVYEEVQEFLLGDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEA 61

Query: 65  FNVNH-------LTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
              +           L         IE +  + L+ DD+  MD+   RRGKP  ++    
Sbjct: 62  MAKDTKMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDI--MDHSKTRRGKPCWYLHPGV 119

Query: 114 VT--AIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIG----LQGMLGGQM 164
            T  AI  G  LL +A ++     + +  L + +R    + LT  IG    +  M+    
Sbjct: 120 TTQVAINDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAK 179

Query: 165 LDIQDEFIDETQVF--------MIQKMKTG-ALMCFACESGAIMAHASQN-EKERLRCFG 214
           LD      + T            I   KT           G +++   +  +KE      
Sbjct: 180 LDANVAHANTTDYIEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVA 239

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
             +G  FQ+ DD++DC    E L K
Sbjct: 240 MVMGEYFQVQDDVMDCFTPPEKLGK 264


>gi|18958450|gb|AAL82595.1|AF470318_1 farnesyl pyrophosphare synthase [Musa acuminata]
          Length = 357

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 87/248 (35%), Gaps = 26/248 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
           G L +  ++   R+ +   +LL   A     +    +   + Y + GGK  R   V +  
Sbjct: 17  GDLKATFRQIYDRLKS---ELLQDDAFDCTDEARQWIDRMLDYNVPGGKLNRGLSVIDSY 73

Query: 63  SLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            L        +        +G  IE +  Y L+ DD+  MDN + RRG+           
Sbjct: 74  KLLKEGNQLNDEEVFLGCALGWCIEWLQAYFLVLDDI--MDNSHTRRGQLCWFRVPKVGL 131

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A+  G  L  +   I+   K   K       +L L + +       GQMLD+      E
Sbjct: 132 IAVNDGILLRNHIPRIL---KRHFKGKPYYVDLLDLFNEVE-FQTASGQMLDLITTHEGE 187

Query: 175 TQ--------VFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                        I + KT             +MA  + +    ++     +G  FQ+ D
Sbjct: 188 KDLSKYTLPVYNRIVQYKTAYYSFYLPVACALLMAGENLDTFVDVKNILVEMGTYFQVQD 247

Query: 226 DLLDCEED 233
           D LDC  D
Sbjct: 248 DFLDCFGD 255


>gi|89892905|ref|YP_516392.1| hypothetical protein DSY0159 [Desulfitobacterium hafniense Y51]
 gi|89332353|dbj|BAE81948.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 319

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 12/175 (6%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L          +   AL     +E       I DD+   DN  +         Q  +  A
Sbjct: 50  LTRMSCECAGGDPEDALPGAIGMEFFALALDIFDDVQDQDNENMP------WRQLPDAQA 103

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF--IDE 174
           I     LL  + E IS+    + DN   + + +  H  G+    G     I D+   +  
Sbjct: 104 INLAICLLMLSDEAISA----IPDNRLFREVAATLHRTGICASNGQFREFIYDDRQQVSF 159

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            Q F +   K G+L   AC+ GAI+  A +     L  FG NLGI+ Q+ +DL D
Sbjct: 160 EQYFEMAGQKAGSLTACACKIGAILGGAEEPVIHGLEQFGINLGILNQIRNDLND 214


>gi|85001640|ref|XP_955531.1| farnesyl pyrophosphate synthetase [Theileria annulata strain
           Ankara]
 gi|65303677|emb|CAI76055.1| farnesyl pyrophosphate synthetase, putative [Theileria annulata]
          Length = 384

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 86/225 (38%), Gaps = 39/225 (17%)

Query: 42  AIRYALLGGKKIRSFLVT-------------------ECASLFNVNHLTALRVGAAIECI 82
           A++Y L GGK +R  +V                        ++N NHL    V   +E +
Sbjct: 50  AVQYNLQGGKMLRGTMVLSTVKSLCGTNIPENLMTQTLIVGMYNSNHLKQFIVAWCVELL 109

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQY--DEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
               L+ DD+  +D    RR     ++        AI     L T  + I+      +KD
Sbjct: 110 QTSFLVADDI--IDKSTKRRSNTCWYLVPTIGVSNAINDVMFLYTLIYRIL---FNTMKD 164

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID--------ETQVF-MIQKMKT-GALMC 190
           + +   ++   + + +  +L GQ LDI +   D         T++F  I K KT      
Sbjct: 165 SKKFLEIIETFNRVSMTTIL-GQHLDIYESNSDVLFHDSKEATKLFAEICKNKTSYYSFF 223

Query: 191 FACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              + G +++    S     ++      +G +FQ  DD LDC  D
Sbjct: 224 LPLKLGMMLSGVELSNLFYSKVESISILIGTLFQAQDDYLDCYGD 268


>gi|207109676|ref|ZP_03243838.1| putative octaprenyl-diphosphate synthase [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 166

 Score = 92.5 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 20/174 (11%)

Query: 51  KKIRSFLVTECASLFNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP 105
           K +RS L+     L +          A  + A +E I   SL+HDD+  +D   +RR  P
Sbjct: 5   KMLRSKLMLA---LLDEKTSTILLDKAFNLCAIVEMIQTASLLHDDV--IDKATMRRKLP 59

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +++  +    A++ G+   + AF  +S     +     S  +L L+        +G    
Sbjct: 60  SINALFGNFNAVMLGDVFYSKAFFELSKMGESIA-KALSNAVLRLSRGEIEDVFVGECF- 117

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                  D+ + + I + KT   +  + +S AI+        +    FG N G+
Sbjct: 118 -----NSDKQKYWRILEDKTAHFIEASLKSMAILL---DKNAKIYADFGLNFGM 163


>gi|154509178|ref|ZP_02044820.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798812|gb|EDN81232.1| hypothetical protein ACTODO_01699 [Actinomyces odontolyticus ATCC
           17982]
          Length = 367

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 90/250 (36%), Gaps = 41/250 (16%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL---R 74
           T L  LL +  +  +++   R   A+  ++ GGK+ R+ +     +L +   +  +    
Sbjct: 20  TSLAHLLARAGTSDRSEEFSR---AVLASVSGGKRFRALMAHVGYALSSGTSVEEVSLPH 76

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAII 118
           + AA+E     +L+HDD+  +D    RRG PT H +                + +  AI+
Sbjct: 77  LSAALELYQASALVHDDI--IDKADERRGMPTPHRRLANYHTAQSWIGSSTDFGQHGAIL 134

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--- 175
            G+ L + A          L+++       S         +  GQ LDI  E        
Sbjct: 135 VGDFLFSAATAAADEQALTLRED--CARAFSRRFADMHAEVALGQYLDITAEQTPLDPER 192

Query: 176 -------QVFMIQKMKTG-ALMCFACESGAIMAHAS----QNEKERLRCFGENLGIIFQL 223
                      +   K+    +      GAI   +S     +  + L       G+ FQL
Sbjct: 193 TDALSTSDSLEVALHKSAHYSVVHPALLGAICGASSFDRVADLLDVLETILTPWGLAFQL 252

Query: 224 ADDLLDCEED 233
            DD L    D
Sbjct: 253 RDDDLGVFGD 262


>gi|316969473|gb|EFV53567.1| polyprenyl synthetase superfamily [Trichinella spiralis]
          Length = 683

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 18/186 (9%)

Query: 48  LGGKKIRSFLV---TECASLFNVNHLTALRV---GAAIECIHCYSLIHDDLPSMDNGYIR 101
            GGK IR  L+    E   LF+     A +     +A+E +H   LI DD+  MDN   R
Sbjct: 501 AGGKGIRGRLLTGALEANVLFDDRTSLAQKAHTIASAVEMLHAGFLIQDDI--MDNASTR 558

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGKP  + Q      I  G  L + A  +   P   L D+ +   ++S      +   L 
Sbjct: 559 RGKPCWYRQVGLSG-INDGVLLQSAASWL---PSVVLDDHPQKHAIVSSFVEATVITSL- 613

Query: 162 GQMLDI---QDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKE-RLRCFGEN 216
           GQ LD+   + +     +   +   KT      F  + G ++A     E E  L+     
Sbjct: 614 GQKLDMEKARPDTCSWDRYRELVTNKTAHYSFWFPLKVGLLLADIQLEEVEIELKNICYE 673

Query: 217 LGIIFQ 222
            G  FQ
Sbjct: 674 FGFYFQ 679


>gi|322796005|gb|EFZ18629.1| hypothetical protein SINV_08110 [Solenopsis invicta]
          Length = 338

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 85/243 (34%), Gaps = 28/243 (11%)

Query: 13  SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-----NV 67
            K++ T+  D++ +  +      N+++   + Y +LGGK+ R+ ++     L        
Sbjct: 4   KKQMMTVWPDIVGELTNAEHAVINNKMKKILEYNVLGGKQFRALILIYAYQLVTNKFTKE 63

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           N      V   +E     +++ DDL   D    RRG P  +       A       +T A
Sbjct: 64  NMRLVRIVAWCMELTQAAAIMIDDLQ--DQSLFRRGNPCWYRCDQIELA------AITDA 115

Query: 128 FEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLD----------IQDEFIDE 174
            ++  S    +K + + +     L  T        + GQ+LD             E    
Sbjct: 116 LKLKHSIFYLIKKHCKGKECYVDLMETFEETSSKTVDGQILDLQLSTNVNKKPNLELFTM 175

Query: 175 TQVFMIQKMKT-GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                I + KT    +         +A    +    +       +G +FQ+ DD LDC  
Sbjct: 176 DTYNCIVRNKTSYYSVVLPITIAMHLAGIKDRESFMQAESISLEIGRLFQIQDDFLDCFG 235

Query: 233 DLP 235
           D  
Sbjct: 236 DSE 238


>gi|71005854|ref|XP_757593.1| hypothetical protein UM01446.1 [Ustilago maydis 521]
 gi|46097004|gb|EAK82237.1| hypothetical protein UM01446.1 [Ustilago maydis 521]
          Length = 399

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 98/262 (37%), Gaps = 44/262 (16%)

Query: 6   PSKLQ-ENSKRIDTILDDLLLQ-----TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
            ++L+ +  KR +++   L+ +     T+  M  +  D     + Y   GGK  R   V 
Sbjct: 87  KAQLKIQKRKRFESVFPLLVEELTAYLTSEKMPAEAIDWFRRNLDYNTPGGKLNRGLSVV 146

Query: 60  ECASLF---------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           +   +                   +L A  +G  IE +  Y L+ DD+  MD    RRG+
Sbjct: 147 DTVEILLCTDSDTGKISRELTEPEYLKAAILGWCIELLQAYFLVADDM--MDASVTRRGQ 204

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGML 160
           P  +           GN  +  AF + ++    LK + RS     ++L L H++  Q  L
Sbjct: 205 PCWYRVEG------VGNIAINDAFMLEAAIYFLLKKHFRSDPYYGMLLELFHDVTFQTEL 258

Query: 161 GGQMLDIQDEFIDETQV--------FMIQKMKTG-ALMCFACESGAIMAHASQNEK-ERL 210
            GQ++D+     D   +         +I   KT              MA  +     ++ 
Sbjct: 259 -GQLIDLITAPEDSVDLSKFSLQKHHLIVVYKTAFYSFYLPVALAMRMAGVTDETLYKQA 317

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
                 +G  FQ+ DD LDC  
Sbjct: 318 LDILLPMGEYFQVQDDFLDCYG 339


>gi|296809441|ref|XP_002845059.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
           113480]
 gi|238844542|gb|EEQ34204.1| geranylgeranyl pyrophosphate synthetase [Arthroderma otae CBS
           113480]
          Length = 319

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 70/184 (38%), Gaps = 15/184 (8%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK IR  ++        V   +   V   +  +H  SL+ DD+   D+ ++RRG P  H
Sbjct: 23  PGKDIRGQMIAAYNRWLQVPEESLAIVTKVVVMLHTASLLVDDVE--DSSHLRRGAPVAH 80

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A E I         NI  + +++L    G+        L  +
Sbjct: 81  NIFGVPQTINSANYVYFLALEEIQKLNNPEAINIFIKELMNLHRGQGM-------DLYWR 133

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D      E     +   KTG L   A +     ++   +    +      +G++FQ+ DD
Sbjct: 134 DTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQTESNVPIDCVPLVD----LMGLMFQVCDD 189

Query: 227 LLDC 230
            L+ 
Sbjct: 190 YLNL 193


>gi|156050145|ref|XP_001591034.1| farnesyl pyrophosphate synthetase [Sclerotinia sclerotiorum 1980]
 gi|154692060|gb|EDN91798.1| farnesyl pyrophosphate synthetase [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 347

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 93/247 (37%), Gaps = 30/247 (12%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV------T 59
           + L+E       +++DLL     +   Q     L A  YA  +GGK  R   V       
Sbjct: 5   TTLKEFESVFPKLVEDLLAHAQKYNLPQQGQDWLKACLYANTIGGKCNRGMSVPDSVSLL 64

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A L    +  +  +G   E +  + L+ DD+  MD    RRG+P  + Q +       
Sbjct: 65  LEAPLSEEQYFESATLGWMTELLQAFFLVSDDI--MDGSITRRGQPCWYRQPN------V 116

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLD--------I 167
           G   +  AF + S+  + LK   RS      ++ L H I  Q  L GQ+ D        +
Sbjct: 117 GMIAINDAFILESAIYSLLKKYFRSHPSYVDLIELFHEITYQTEL-GQLCDLLTAPEDKV 175

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQLAD 225
             +    T+   I   KT     +   + A+     A+    ++       LG  FQ+ D
Sbjct: 176 DLDNFSMTKYDFIVTYKTAYYSFYLPVALALHHQKIATPKNLKQAEDILIPLGQYFQIQD 235

Query: 226 DLLDCEE 232
           D LD   
Sbjct: 236 DYLDNFG 242


>gi|146100853|ref|XP_001468963.1| farnesyl pyrophosphate synthase [Leishmania infantum]
 gi|321399468|emb|CBZ08669.1| farnesyl pyrophosphate synthase [Leishmania infantum JPCM5]
          Length = 362

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 97/265 (36%), Gaps = 37/265 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASL 64
           + ++   K  + + + LL       +   + +  L S +    LGGK  R   V + A  
Sbjct: 2   AHMERFQKVYEEVQEFLLGDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEA 61

Query: 65  FNVNH-------LTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
              +           L         IE +  + L+ DD+  MD+   RRGKP  ++    
Sbjct: 62  MAKDTKMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDI--MDHSKTRRGKPCWYLHPGV 119

Query: 114 VT--AIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIG----LQGMLGGQM 164
            T  AI  G  LL +A ++     + +  L + +R    + LT  IG    +  M+    
Sbjct: 120 TTQVAINDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAK 179

Query: 165 LDIQDEFIDETQVF--------MIQKMKTG-ALMCFACESGAIMAHASQN-EKERLRCFG 214
           LD      + T            I   KT           G +++   +  +KE      
Sbjct: 180 LDANVAHANTTDYIEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTVEKVDKEATHKVA 239

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
             +G  FQ+ DD++DC    E L K
Sbjct: 240 MVMGEYFQVQDDVMDCFTPPEKLGK 264


>gi|89276803|gb|ABD66600.1| putative farnesyl-diphosphate synthetase [Tuber borchii]
          Length = 347

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 21/233 (9%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHLTALR- 74
           + I+ +L+ +      +++  + +     +  LGGK  R   V E   L       +L  
Sbjct: 14  NVIIPELIAEVKKTQISENVIQWIERNFLHNTLGGKYNRGMTVPETYRLLTGKETLSLAE 73

Query: 75  ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +G   E +    L+ DD+  MD+   RRG P  ++        I  + LL  + 
Sbjct: 74  YKLSAILGWCTELLQAMFLVADDI--MDSSKTRRGSPCWYLMEGVGNIAINDSFLLESSI 131

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDE-----TQVFMIQ 181
            ++   K   K       ++ L H++  +  LG    +L   ++ ID       + + I 
Sbjct: 132 YVL--LKKYFKGTDYYIDLVELFHDVTWKTELGQLVDLLTSPEDSIDLNRFNYDKYYFIV 189

Query: 182 KMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KT     +   + A+     A+ +   R R     LG  FQ+ DD LDC  
Sbjct: 190 RYKTAFYSFYLPVALAMHQAGIATPDNLTRARDVLIPLGEYFQVQDDYLDCYG 242


>gi|169624321|ref|XP_001805566.1| hypothetical protein SNOG_15418 [Phaeosphaeria nodorum SN15]
 gi|111055963|gb|EAT77083.1| hypothetical protein SNOG_15418 [Phaeosphaeria nodorum SN15]
          Length = 347

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 93/260 (35%), Gaps = 39/260 (15%)

Query: 5   LPSKLQEN---SKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           +P+ LQE      RI   L     Q    +  +  D    ++ Y  +GGK  R   V + 
Sbjct: 1   MPTTLQEFESVWPRIRADLQAHCQQYK--LPQESLDWFTKSLDYNTVGGKCNRGMSVIDT 58

Query: 62  ASLF-----NVNHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           A++      +       R       IE +  + L+ DD+  MD+   RRG P  +     
Sbjct: 59  AAILTNKTLDPASEDYFRPALLGWMIELLQAFFLVSDDI--MDSSKTRRGSPCWY----- 111

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQD 169
             A   G   +  AF + S+    LK + R +     M+ L H +  Q    GQ+ D+  
Sbjct: 112 -LAPKVGMIAINDAFMLESAIYLLLKKHFRQEKSYIDMVELFHEVTFQTEC-GQLCDLIT 169

Query: 170 EFIDETQVF--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGI 219
              D   +          I   KT     +   + A+  +  A+    +        +G 
Sbjct: 170 APEDNVNLDNFSLDKFSFIVIYKTAYYSFYLPVALALYYVGAATPKNLQTAHDILIPMGE 229

Query: 220 IFQLADDLLDCEED---LPK 236
            FQ  DD LD   D   L K
Sbjct: 230 YFQAQDDYLDAFADPKVLGK 249


>gi|46367743|dbj|BAD15361.1| farnesyl diphosphate synthase [Lactarius chrysorrheus]
          Length = 381

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 80/233 (34%), Gaps = 23/233 (9%)

Query: 21  DDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------AL 73
           DDLL     H M  +  +    ++ Y + GGK  R   V +  ++     LT      A 
Sbjct: 40  DDLLEDFRKHNMPEEAIEYYQRSMDYNVPGGKLNRGMSVVDSVAILKGRELTESEYFQAA 99

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIIS 132
            +G A+E +  Y L+ DD+  MD    RRG+P  +        AI     L    F++I 
Sbjct: 100 VLGWAVEWMQAYFLVSDDI--MDASITRRGQPCWYRTEGVGFMAINDALILEGAIFQMIR 157

Query: 133 SPKTQLK---DNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
               +     D I     +S    +G L  ++      +       ++   I   KT   
Sbjct: 158 KHFRKEPFYVDLIDLLHEVSYQTEMGQLVDLITAPEHSVDLSKFSLSRHSTIVIYKTAYY 217

Query: 189 -MCFACESGAIMAHASQNEKE----RLRCFGENL----GIIFQLADDLLDCEE 232
                     ++      ++            ++    G  FQ+ DD LD   
Sbjct: 218 SFYLPVALSLLLCGFPAEKQNETDPDFYKIALDILVPLGEYFQIQDDYLDYSG 270


>gi|317038629|ref|XP_001401830.2| hypothetical protein ANI_1_1856184 [Aspergillus niger CBS 513.88]
          Length = 693

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 8/188 (4%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR  ++       N     A +V   I  +H  SL+ DD+   DN  +RRG+PT +  
Sbjct: 400 KNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDIQ--DNSELRRGRPTAYRV 457

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I A    LT AFE      + +    R  ++  L     L+ +  GQ +D+   
Sbjct: 458 FGVAQTINAATHALTQAFEKAPHMGSSVSSPARMVMVCLLIEVDELRNLHVGQAMDLHWT 517

Query: 171 FI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER--LRCFGENLGIIFQLA 224
                        + ++KTGAL C A     I    S    ++  L     +LG  FQ  
Sbjct: 518 RSGYRPSIADYLEMNRLKTGALFCLASNLLYIQGSFSAEAIKQTDLSDLMISLGQYFQAR 577

Query: 225 DDLLDCEE 232
           DD ++   
Sbjct: 578 DDYINLAS 585


>gi|238498004|ref|XP_002380237.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
 gi|220693511|gb|EED49856.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
          Length = 387

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 68/194 (35%), Gaps = 20/194 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR   +    S   V   ++  + + I  +H  SL+ DD+   DN   RRG PT H  
Sbjct: 116 KNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDIE--DNSVPRRGSPTTHTL 173

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I + N     AFE +   ++     +  + +         + +  GQ LD+  +
Sbjct: 174 FGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQL---------KNLHCGQGLDLYWK 224

Query: 171 FIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +        +   +   KTG             +       +  R F   LG  FQ+ DD
Sbjct: 225 YNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDA-RRFVTLLGRYFQIRDD 283

Query: 227 LLDCEE----DLPK 236
             +       D  K
Sbjct: 284 YQNLTSAEDLDEGK 297


>gi|50355631|dbj|BAD29970.1| geranylgeranyldiphosphate synthase [Phoma betae]
          Length = 343

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 19/183 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK++R+ L+        V   +   +G  +  +H  SL+ DD+   DN  +RRGKP   
Sbjct: 67  PGKEVRTLLLACFDEWLQVPPESLEVIGQVVRMLHTASLLIDDIQ--DNSELRRGKPVAQ 124

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A E ++S K     +I ++ +L          +  GQ +D+ 
Sbjct: 125 NIFGTALTINSANYVYFLALEKLNSLKNPNITDIFTEELLR---------LHRGQAMDLY 175

Query: 169 DEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
                    E + F +    TG L           +    +    +    E LG+IFQ+ 
Sbjct: 176 WRDTLTCPTEEEYFEMVANMTGGLFWLMYRMMNAESSMPIDLLPVV----ELLGVIFQVL 231

Query: 225 DDL 227
           DD 
Sbjct: 232 DDY 234


>gi|254672306|emb|CBA05417.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha275]
          Length = 186

 Score = 92.1 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           NI  +G +  Q+++I +  I E Q   + + KT  L   A + GAI+  AS   +  L+ 
Sbjct: 4   NIIAEGEVM-QLMNIGNTDITEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKD 62

Query: 213 FGENLGIIFQLADDLLDCEEDLP 235
           +G  +G  FQ+ DD+LD   +  
Sbjct: 63  YGMYVGTAFQIIDDVLDYSGETE 85


>gi|59709781|gb|AAW88518.1| geranylgeranyl diphosphate synthase [Epichloe typhina]
          Length = 464

 Score = 91.8 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 17/215 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D L  T     T   ++++ A    + G  GK  RS L++   +   V       +  A+
Sbjct: 159 DDLNYTPQRSWTDDKEKVVRAPFDYVAGHPGKDFRSQLISSFNAFLQVPPDRLEIITRAV 218

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +        
Sbjct: 219 GMLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPPI 276

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
             I +  +++L    G+        L  +D      E     +   KTG L     +   
Sbjct: 277 IAIFADELVNLHRGQGM-------DLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQ 329

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + A+ +    +      +G+IFQ+ DD ++   
Sbjct: 330 AESAAAVDCVPLV----NLIGLIFQIRDDYMNLSS 360


>gi|14422406|dbj|BAB60822.1| putative FPP synthase 2 [Eucommia ulmoides]
          Length = 342

 Score = 91.8 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 86/250 (34%), Gaps = 25/250 (10%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L SK  E       +  +LL   A          +   + Y + GGK  R   V +  
Sbjct: 2   SDLKSKFLEVYS---VLKSELLNDPAFDFTDDSRLWVERMLDYNVPGGKLNRGLSVIDSF 58

Query: 63  SLFNV---NHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L           + +       IE +  Y L+ DD+  MD+ + RRG+P          
Sbjct: 59  KLLKEGKEPTDEEIFLACVLGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGM 116

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
            I   +GL+     I    K   K       +L L + +       GQM+D+    + E 
Sbjct: 117 -IAVNDGLILRN-HIPRILKKHFKGKPYYVDLLDLFNEVE-FQTASGQMIDLITTLVGEK 173

Query: 176 QV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            +          I + KT             +M+  + +    ++     +G  FQ+ DD
Sbjct: 174 DLSKYSLPLHHRIVQYKTAYYSFYLPVACALVMSGENLDNHVDVKNILVEMGTYFQVQDD 233

Query: 227 LLDCEEDLPK 236
            LDC  D PK
Sbjct: 234 YLDCFGD-PK 242


>gi|326490349|dbj|BAJ84838.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326510595|dbj|BAJ87514.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 408

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 89/242 (36%), Gaps = 23/242 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-- 65
           +   +  + + D+LL   A +     +    +   + Y + GGK  R   V +   L   
Sbjct: 70  ERFLRAYERLKDELLNDRAFNFDFTDETRQWVAKMLDYNVPGGKLNRGLSVIDSYMLLRE 129

Query: 66  -----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                + +   A  +G  IE +   +L+ DD+   DN Y RR     +       +    
Sbjct: 130 GTEVDDEDFYLACVLGWCIEWLQASALVLDDI--TDNAYTRRDNLCWYKLPTVGLS-AIN 186

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176
           +G+L     + +  K   K+      ++ L + IGLQ    GQMLD+             
Sbjct: 187 DGVLLKC-HVQAIIKRYFKEKFYFMELMELWNEIGLQ-TAMGQMLDLITTHTGAKDLARY 244

Query: 177 ----VFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                  I K KT             ++  A  ++   L+     +G+ FQ+ DD LDC 
Sbjct: 245 RIQGYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCF 304

Query: 232 ED 233
            D
Sbjct: 305 GD 306


>gi|224089549|ref|XP_002308751.1| predicted protein [Populus trichocarpa]
 gi|222854727|gb|EEE92274.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 80/228 (35%), Gaps = 21/228 (9%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNHLTAL 73
            +LL   A        D +   + Y + GGK  R   V +          L         
Sbjct: 17  KELLEDPAFEWSPDSRDWVDRMLDYNVPGGKLNRGLSVIDSYKYLKEGKELTEDEIFLTS 76

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +G  IE +  Y L+ DD+  MD+ + RRG+P           I A +G+L     I   
Sbjct: 77  ALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGL-IAANDGILLRN-HIPRI 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +D      +L L + +       GQM+D+      E  +          I + KT
Sbjct: 133 LKNHFRDKAYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                        +MA  + +    ++     +G  FQ+ DD LDC  
Sbjct: 192 AYYSFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFG 239


>gi|164661846|ref|XP_001732045.1| hypothetical protein MGL_0638 [Malassezia globosa CBS 7966]
 gi|159105947|gb|EDP44831.1| hypothetical protein MGL_0638 [Malassezia globosa CBS 7966]
          Length = 361

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 91/254 (35%), Gaps = 42/254 (16%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSA-----IRYALLGGKKIRSFLVTECASLF- 65
             +R + +   ++ +    ++TQ      S      + Y   GGK  R   V +   +  
Sbjct: 10  KRQRFEHVFSQIVEELLEFLKTQKMPEEASTWFKRNLEYNTPGGKLNRGLSVVDTVEILL 69

Query: 66  -------------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                           ++ A  +G  +E +  Y L+ DD+  MD    RRG P  +    
Sbjct: 70  CTDEHGQKTRELTESEYVQAAVLGWCVELLQAYFLVADDM--MDASITRRGHPCWYRVDG 127

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQ 168
                  GN  +  AF + ++    LK + +S+     +L L H++  Q  L GQ++D+ 
Sbjct: 128 ------VGNIAINDAFMLEAAIYHLLKTHFKSESYYGHLLELFHDVTFQTEL-GQLIDLI 180

Query: 169 DEFIDETQV--------FMIQKMKTG-ALMCFACESGAIMAHASQNEK-ERLRCFGENLG 218
               D   +         +I   KT              M H +     +  +     LG
Sbjct: 181 TAPEDVVDLSKFSPEKHRLIVVYKTAFYSFYLPVALAMRMCHVNDEAAFKHAQDILIPLG 240

Query: 219 IIFQLADDLLDCEE 232
             FQ+ DD LDC  
Sbjct: 241 EYFQIQDDYLDCYG 254


>gi|126434877|ref|YP_001070568.1| polyprenyl synthetase [Mycobacterium sp. JLS]
 gi|126234677|gb|ABN98077.1| Polyprenyl synthetase [Mycobacterium sp. JLS]
          Length = 418

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 96/269 (35%), Gaps = 45/269 (16%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR---------------YAL 47
           G  PS  ++    ID    + L     H+     D +   +R                  
Sbjct: 43  GATPSGSEDVVPDIDQT--EFLSDLEEHLHAVVRDTVAEPLRSIDENLGTVAALCQSAVQ 100

Query: 48  LGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GGK++R         +    +      +R+ AA+E +H   L+HDD+  +D   +RRG+
Sbjct: 101 SGGKRLRPRFAYWAWRVGAPADAAPQPLIRLAAALELLHAAILVHDDV--IDASEVRRGQ 158

Query: 105 PTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           P+V                   + +  A++ G+ L + A +        L   I  +   
Sbjct: 159 PSVRAALTAGHRRDAGWGDATDFGDNMALLVGDLLWSAAHDTFDDAVAGLPAGIAQR--T 216

Query: 149 SLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKT-GALMCFACESGAIMAH-AS 203
           S         +L GQ+L+++              I + KT    +    E G  +A  AS
Sbjct: 217 SRAFRTMRVEVLAGQLLELRAQAGRDYHADTAEKILRYKTSAYTVERPVELGLELAGSAS 276

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
               + LR +   +G  FQL DDL D   
Sbjct: 277 PATAQTLRDYAGAVGQAFQLRDDLADLFG 305


>gi|63103163|gb|AAY33487.1| farnesyl diphosphate synthase [Mythimna unipuncta]
          Length = 427

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 82/228 (35%), Gaps = 23/228 (10%)

Query: 24  LLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSFLVTECASLFN-------VNHLTALRV 75
           L +T  H+      + L   ++Y +  GKK R         +          N   A  +
Sbjct: 103 LTETGKHIDVPEAGKWLAKLLQYNVPNGKKNRGLATVMAYKMLEKKENLTPENIHLANMM 162

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSP 134
           G ++E  H + L+ +D+  M+   +RRG P  +   +   TAI   +  L  A  + S+ 
Sbjct: 163 GWSVEMFHTHQLLLNDI--MEGTEMRRGAPCWYKHPEVGLTAIN--DAALIQA-AMFSTL 217

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-------IDETQVFMIQKMKTGA 187
           K    +    + +L   + + L+  +G  + +   +            +   I K KT  
Sbjct: 218 KRHFNNRNCYKTVLETFNEMLLKCSVGHFLENQMAKTDKPDLTQFTMEKYEAITKYKTSY 277

Query: 188 -LMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                      +M          + +     +G  FQ+ DD LDC  D
Sbjct: 278 HTFQMPVTLALLMTGVEDPETHRQAKTILLKMGEFFQIQDDFLDCFGD 325


>gi|62510700|sp|Q9P885|GGPPS_RHIRA RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|7649674|emb|CAB89115.1| geranylgeranyl pyrophosphate synthase [Mucor circinelloides f.
           lusitanicus]
          Length = 303

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 12/202 (5%)

Query: 32  QTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +    D +L    Y +   GK IR+ L++      +V       +   I  +H  SL+ D
Sbjct: 10  ERSTEDIILEPYTYLISQPGKDIRAKLISAFDLWLHVPKDVLCVINKIIGMLHNASLMID 69

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   D+  +RRG P  H  Y     I   N ++  A + +          + ++ +++L
Sbjct: 70  DVQ--DDSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNIPSMMQVCTEELINL 127

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
               G++      +         E +   +   KT  L+  A       + +  +    +
Sbjct: 128 HRGQGIELYWRDSLTCP-----TEEEYIDMVNNKTSGLLRLAVRLMQAASESDIDYTPLV 182

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
              G +    FQ+ DD ++ + 
Sbjct: 183 NIIGIH----FQVRDDYMNLQS 200


>gi|260363971|ref|ZP_05776710.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030]
 gi|308112584|gb|EFO50124.1| octaprenyl-diphosphate synthase [Vibrio parahaemolyticus K5030]
          Length = 195

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           ++   ++S   N+  +G +  Q+++  D    E     +   KT  L   A + GAI+  
Sbjct: 1   MKILQLMSNAVNVIAEGEV-QQLMNCNDPDTTEESYMQVIYSKTARLFESATQIGAILND 59

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A ++ +  L+ +G+ LG  FQL DD++D   D
Sbjct: 60  APEHVELALQNYGKYLGTAFQLIDDVMDYTSD 91


>gi|213402169|ref|XP_002171857.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
           yFS275]
 gi|211999904|gb|EEB05564.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces japonicus
           yFS275]
          Length = 341

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 84/241 (34%), Gaps = 23/241 (9%)

Query: 10  QENSKRIDTILDDLLLQTAS-HMQTQHNDRLLSAIRYALLGGKKIR--SFL----VTECA 62
           ++ S     ILD L    +  +      + +L  I    +GGK  R  + L    V    
Sbjct: 3   RDYSAHFAIILDTLTQSLSKLNCPEGLKENVLHTITQNTIGGKGTRGKAVLESVKVLLGT 62

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L +  H  +  +G  +E +    L+ DD+  MD    RRG+P  ++Q     A      
Sbjct: 63  ELTDDMHEKSCLLGWIVEMLQGSFLVADDI--MDKSLTRRGRPCWYLQVGTSRAFTEAVM 120

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--------IQDEFIDE 174
           +    F ++   +   +D    + +L   H I LQ    GQ +D          +     
Sbjct: 121 MENLVFVLL---RLFFRDQPYYKELLDTFHEILLQTE-TGQEMDLILSIGGVPMNTSFSL 176

Query: 175 TQVFMIQKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
                I   KT         +   I+    + +     +     LG  FQ  DD LDC  
Sbjct: 177 KAYEFIVTYKTAYYSFYLPIKCAMILVGMKEKQAYVDAKRLAVQLGRYFQFQDDFLDCYG 236

Query: 233 D 233
           D
Sbjct: 237 D 237


>gi|1922251|emb|CAA72793.1| farnesyl pyrophosphate synthase [Gossypium arboreum]
          Length = 342

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 82/232 (35%), Gaps = 23/232 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL---- 73
            +  +LL   +  +  +    +   + Y + GGK  R   V +   L             
Sbjct: 14  QLKSELLQDPSFELTDESRQWVERMLDYNVPGGKLNRGLSVIDSYRLLKDGKELTQDEIF 73

Query: 74  ---RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
               +G  IE +  Y L+ DD+  MD+ + RRG+P           A+  G  L  +   
Sbjct: 74  LTSALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGMIAVNDGVILRNHITR 131

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQ 181
           I+   K   +       +L L + +       GQM+D+      E  +          I 
Sbjct: 132 IL---KNHFRGKPYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYSLQQHRRIV 187

Query: 182 KMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           + KT             +M   + +    ++    ++GI FQ+ DD LDC  
Sbjct: 188 QYKTAYYSFYLPVACALVMCGENLDNHIDVKNILVDMGIYFQVQDDYLDCFG 239


>gi|116309645|emb|CAH66696.1| OSIGBa0158D24.4 [Oryza sativa Indica Group]
 gi|218195739|gb|EEC78166.1| hypothetical protein OsI_17740 [Oryza sativa Indica Group]
          Length = 392

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 92/248 (37%), Gaps = 21/248 (8%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + G+    +   +    + DDL+   +  +  +    L   I Y + GGK  R   V + 
Sbjct: 48  DHGIVDARERFVQAYGRLRDDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDS 107

Query: 62  ASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L          +   A  +G  +E     +L+ DD+  MD+ + RR +   + + +  
Sbjct: 108 YLLLKQGSEVTEDDFFLACVLGWCVEWFQACALLLDDI--MDDSHTRRDQICWYRRPEVG 165

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
                 +G++     I+   K   ++      +L +   I LQ  L GQMLD+       
Sbjct: 166 LR-GINDGIILKC-HILIMIKKYFREKPYFLDLLEIWSEIALQTSL-GQMLDLIGTHTGA 222

Query: 175 TQ--------VFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                        I K KT          +  +++ A   +   L+     +GI FQ+ D
Sbjct: 223 DDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLEDFSGLKDILIEMGIYFQIQD 282

Query: 226 DLLDCEED 233
           D LDC  D
Sbjct: 283 DYLDCFAD 290


>gi|322696191|gb|EFY87987.1| Farnesyl pyrophosphate synthetase [Metarhizium acridum CQMa 102]
          Length = 347

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 85/241 (35%), Gaps = 20/241 (8%)

Query: 10  QENSKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLV------ 58
           +   K  + +   L++ +L+ A    +     D L + +    LGGK  R   V      
Sbjct: 4   KTTLKEFEAVYPKLEEAILEHARKYKLPQGELDWLKTNLETNPLGGKCNRGMSVPDSVSL 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
              A+L    +  A  +G   E +  + L+ DD+  MD    RRGKP  + Q      AI
Sbjct: 64  LLGAALNEEQYFQAATLGWMTELLQAFFLVSDDM--MDGSITRRGKPCWYRQEGVGMIAI 121

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFID 173
                L +  + ++          I    +   T      G L   +   +D    +   
Sbjct: 122 NDAFILESSIYVLLRKYFRSHPAYIDIVELFQETTFQTEMGQLCDLLTAPEDKVNLDNFS 181

Query: 174 ETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            T+   I   KT     +   + A+  +  A+    ++       LG  FQ+ DD LD  
Sbjct: 182 MTKYRFIVIYKTAYYSFYLPVALALHQLNLATPKNLKQAEDILIPLGEYFQIQDDYLDNF 241

Query: 232 E 232
            
Sbjct: 242 G 242


>gi|146319410|ref|YP_001199122.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
 gi|145690216|gb|ABP90722.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
          Length = 164

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 3/118 (2%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTA-L 73
            I+  L+++     S M   H       + Y    GK +R+ L    A +       + L
Sbjct: 11  EIERGLEEVKSIILSEMMVLHPAVTAKIVEYVEAPGKYLRAGLCLLFAQMTEGKISRSKL 70

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
              A +E +H  +LIHDD+  +D    RRG    H Q+    AI  G+ LL Y+  + 
Sbjct: 71  YFAAHLEVLHLATLIHDDV--IDGADKRRGVTAAHQQFSNRIAIYTGDYLLAYSSRLF 126


>gi|118486658|gb|ABK95166.1| unknown [Populus trichocarpa]
          Length = 342

 Score = 91.8 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 80/228 (35%), Gaps = 21/228 (9%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNHLTAL 73
            +LL   A        D +   + Y + GGK  R   V +          L         
Sbjct: 17  KELLEDPAFEWSPDSRDWVDRMLDYNVPGGKLNRGLSVIDSYKYLKEGKELTEDEIFLTS 76

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +G  IE +  Y L+ DD+  MD+ + RRG+P           I A +G+L     I   
Sbjct: 77  ALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGL-IAANDGILLRN-HIPRI 132

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +D      +L L + +       GQM+D+      E  +          I + KT
Sbjct: 133 LKNHFRDKAYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                        +MA  + +    ++     +G  FQ+ DD LDC  
Sbjct: 192 AYYSFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFG 239


>gi|1346029|sp|P49352|FPPS2_LUPAL RecName: Full=Farnesyl pyrophosphate synthase 2; Short=FPP synthase
           2; Short=FPS 2; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase 2; AltName:
           Full=Dimethylallyltranstransferase 2; AltName:
           Full=Farnesyl diphosphate synthase 2; AltName:
           Full=Geranyltranstransferase 2
 gi|710350|gb|AAA87729.1| farnesyl pyrophosphate synthase [Lupinus albus]
          Length = 342

 Score = 91.8 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 78/228 (34%), Gaps = 23/228 (10%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALR 74
           +LL   A    T     +   + Y + GGK  R   V +   L        +     A  
Sbjct: 18  ELLQDPAFEFSTDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLLKDGQELNDEEIFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MDN + RRG P           A   G  L  +   I+  
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRRGHPCWFRVPKVGMIAPNDGVVLRNHIPRIL-- 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   +       +L L + +       GQM+D+      E  +          I + KT
Sbjct: 134 -KKHFRGKPYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                        +M   + +    ++     +G  FQ+ DD LDC  
Sbjct: 192 AYYSFYLPVACALLMVGENLDNHTDVKNILVEMGTYFQVQDDYLDCFG 239


>gi|108799219|ref|YP_639416.1| polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119868335|ref|YP_938287.1| polyprenyl synthetase [Mycobacterium sp. KMS]
 gi|108769638|gb|ABG08360.1| Polyprenyl synthetase [Mycobacterium sp. MCS]
 gi|119694424|gb|ABL91497.1| Polyprenyl synthetase [Mycobacterium sp. KMS]
          Length = 418

 Score = 91.8 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 96/269 (35%), Gaps = 45/269 (16%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR---------------YAL 47
           G  PS  ++    ID    + L     H+     D +   +R                  
Sbjct: 43  GATPSGSEDVVPDIDQT--EFLSDLEEHLHAVVRDTVAEPLRSIDENLGTVAALCQSAVQ 100

Query: 48  LGGKKIRSFLVTECASLF---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
            GGK++R         +    +      +R+ AA+E +H   L+HDD+  +D   +RRG+
Sbjct: 101 SGGKRLRPRFAYWAWRVGAPADAAPQPLIRLAAALELLHAAILVHDDV--IDASEVRRGQ 158

Query: 105 PTVHIQ----------------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           P+V                   + +  A++ G+ L + A +        L   I  +   
Sbjct: 159 PSVRAALTAGHRRDAGWGDATDFGDNMALLVGDLLWSAAHDTFDDAVAGLPAGIAQR--T 216

Query: 149 SLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKT-GALMCFACESGAIMAH-AS 203
           S         +L GQ+L+++              I + KT    +    E G  +A  AS
Sbjct: 217 SRAFRTMRVEVLAGQLLELRAQAGRDYHADTAEKILRYKTSAYTVERPVELGLELAGSAS 276

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEE 232
               + LR +   +G  FQL DDL D   
Sbjct: 277 PATAQTLRDYAGAVGQAFQLRDDLADLFG 305


>gi|67902050|ref|XP_681281.1| hypothetical protein AN8012.2 [Aspergillus nidulans FGSC A4]
 gi|40740444|gb|EAA59634.1| hypothetical protein AN8012.2 [Aspergillus nidulans FGSC A4]
 gi|259480763|tpe|CBF73703.1| TPA: polyprenyl synthetase (Eurofung) [Aspergillus nidulans FGSC
           A4]
          Length = 347

 Score = 91.4 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 73/230 (31%), Gaps = 18/230 (7%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF------LVTECASLFNVNHL 70
           + +LD        ++     +    AI   + GGK  R        +      L    + 
Sbjct: 19  EAMLDHA---RKYNLPQNAQEWFSKAIHTNVPGGKLNRGLSVPDTGVALLQKELSEEQYK 75

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
               +G   E +  + L+ DDL  MD    RRG+P  +        AI     L +  + 
Sbjct: 76  DLATLGWLTELLQAFFLVSDDL--MDGSITRRGQPCWYRHQGVGLIAINDAFLLESGIYV 133

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKT 185
           I+          +    +   T      G L   +   +D+         +   I   KT
Sbjct: 134 ILKKQFRSHPAYVDFIELFHETTWQTELGQLCDLITAPEDKVDLNNFSMEKYMFIVTYKT 193

Query: 186 GALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                +   + A+  +  A+     +       LG  FQ+ DD LD   D
Sbjct: 194 AYYSFYLPVALALHYLQLATPENLRQAHDILIPLGQYFQVQDDYLDAYGD 243


>gi|330791598|ref|XP_003283879.1| farnesyl diphosphate synthase [Dictyostelium purpureum]
 gi|325086150|gb|EGC39544.1| farnesyl diphosphate synthase [Dictyostelium purpureum]
          Length = 384

 Score = 91.4 bits (226), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 87/260 (33%), Gaps = 30/260 (11%)

Query: 1   MN---GGLPSKLQENSKRID--TILDDLLLQTAS--HMQTQHNDRLLSAIRYALLGGKKI 53
           MN     + +  +E    ID   IL + +++      M  Q    +   +   ++GGK  
Sbjct: 25  MNNTAASVKTPKEELKDFIDIFPILSNEIIRELPGMDMPPQTVKWVEKLLETNVMGGKMN 84

Query: 54  RSF-------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           R         L+ E   L       A  +G  +E +  + L+ DDL  MD+   RRG+P 
Sbjct: 85  RGLTVLHSLQLLVEGRQLTRSEIFQANVLGWCVEWLQSFFLVADDL--MDSSITRRGQPC 142

Query: 107 VHIQ------YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML 160
            + Q             IA N        I    K   ++      +L L H    Q  L
Sbjct: 143 WYRQPNPISNNGTPIGTIAVNDSFILESCIYILIKKYFRNEQYYADILDLFHETSYQTEL 202

Query: 161 GG------QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRC 212
           G       Q                I K KT     +   + A++     S    E  + 
Sbjct: 203 GQLLDLTTQPNRGDFSLFTLNTYRRIVKYKTAYYSFYLPVALAMLMCGINSTPAFETAKD 262

Query: 213 FGENLGIIFQLADDLLDCEE 232
               +G  FQ+ DD LDC  
Sbjct: 263 ILLPMGEYFQIQDDYLDCYG 282


>gi|21955860|emb|CAD42869.1| farnesyl pyrophosphate synthase [Mucor circinelloides f.
           lusitanicus]
          Length = 352

 Score = 91.4 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 89/240 (37%), Gaps = 22/240 (9%)

Query: 10  QENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           Q   K   T+ D++LL+   + M     +     + Y + GGK  R   V +   +   +
Sbjct: 13  QAFLKVFPTLADEVLLELRKYNMPEDAYEWTKKMLYYNVPGGKLNRGISVVDTVRILKGD 72

Query: 69  HLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +T      A  +G  IE +  + L+ DD+  MD    RRG+P  +         I    
Sbjct: 73  AVTEDDIFKATVLGWLIEFLQAFFLVSDDI--MDASITRRGQPCWYKSEGVGMVAINDAF 130

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----- 177
           +L     I    K   K       ++ L H +  Q  L GQ+ D+     D+  +     
Sbjct: 131 ILESCIYIF--LKKYFKKTDYYIELVELFHEVTFQTEL-GQLCDLITAPEDDVDLSKFSI 187

Query: 178 ---FMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                I   KT     +   + A+  +   ++   ++       LG  FQ+ DD LDC  
Sbjct: 188 KKHQFIVIYKTAYYSFYLPVALAMHMVGIKNEEAFKQSHDILIPLGEYFQVQDDYLDCYG 247


>gi|119494797|ref|XP_001264204.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
 gi|119412366|gb|EAW22307.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
          Length = 397

 Score = 91.4 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 78/218 (35%), Gaps = 19/218 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D +  + + + +  +   +     Y   + GK+IR  L+      + V+      + A +
Sbjct: 89  DTIDAKLSMYWEAANETVIREPYDYIAGIPGKEIRRKLLEAFNHWYKVDEQPCQAIAATV 148

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
              H  SL+ DD+   D+  +RRG P  H  Y     I + N +   A + +   +   +
Sbjct: 149 GMAHNASLLIDDIQ--DSSKLRRGVPCAHEVYGVAQTINSANYVYFLAQDQLFRLRNWPQ 206

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACES 195
                        N  +  +  GQ +++                +   KTG L   A   
Sbjct: 207 A--------ISVFNEEMVNLHRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLFRMAVR- 257

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +   S      +    + LG+ FQ+ DD  + +E+
Sbjct: 258 ---LLQTSSRHVVDVEQLVDVLGLYFQILDDYKNVKEE 292


>gi|118618553|ref|YP_906885.1| polyprenyl synthetase IdsB [Mycobacterium ulcerans Agy99]
 gi|118570663|gb|ABL05414.1| polyprenyl synthetase IdsB [Mycobacterium ulcerans Agy99]
          Length = 328

 Score = 91.4 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 10/152 (6%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +L+HDD+  M     R G+  V   +    AI+ G+ L T A   ++      
Sbjct: 94  VELVHSGTLLHDDV--MAGEVTRGGRRAVWSIWGIDNAILLGDALQTAAIRTLTDL-PDP 150

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACES 195
              +R+ + L  +       +  G+  D   E            +   KT AL+   C  
Sbjct: 151 GVAVRAVMRLETS----CLDLCIGRFEDCAFECGQAGPVDSYERMAAGKTAALIGCCCGL 206

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           GA+ A A       L  FG  LG+ FQ  +DL
Sbjct: 207 GALAADAGDATITALERFGRELGLAFQCVNDL 238


>gi|332020708|gb|EGI61113.1| Farnesyl pyrophosphate synthetase [Acromyrmex echinatior]
          Length = 362

 Score = 91.4 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 84/235 (35%), Gaps = 23/235 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNHL 70
            ++ DL   T + +       +   ++Y + GGKKIR+  +            L   N  
Sbjct: 34  DVVRDLTDSTKNFIIPDIAKWMAKVLQYNVPGGKKIRALALVYAYKVLAPSDQLTEENIR 93

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +   +E +  + L+ DD+   D   IRRG+P  +   D   A +  + LL  A   
Sbjct: 94  LVRILAWCVELMQAFLLVIDDIQ--DRSLIRRGQPCWYRYNDLGLAAVNDSLLLENAIFY 151

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---------DETQVFMIQ 181
           +   K   K       +L   H+  L+ ++ GQ LD+                 +   I 
Sbjct: 152 L--IKKYFKGKDCYVTLLETFHDTILKTII-GQSLDMLSTNFGKKPDLDMFTMNRYNSIV 208

Query: 182 KMKTG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           + KT              +A         + +     +G +FQ+ DD L C  D+
Sbjct: 209 EYKTSHYSFILPITIAMHLAGIKDPEMFRQAKTILLEMGHLFQVQDDYLGCYSDV 263


>gi|183982574|ref|YP_001850865.1| polyprenyl synthetase IdsB [Mycobacterium marinum M]
 gi|183175900|gb|ACC41010.1| polyprenyl synthetase IdsB [Mycobacterium marinum M]
          Length = 328

 Score = 91.4 bits (226), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 10/152 (6%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +E +H  +L+HDD+  M     R G+  V   +    AI+ G+ L T A   ++      
Sbjct: 94  VELVHSGTLLHDDV--MAGEVTRGGRRAVWSIWGIDNAILLGDALQTAAIRTLTDL-PDP 150

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE---FIDETQVFMIQKMKTGALMCFACES 195
              +R+ + L  +       +  G+  D   E            +   KT AL+   C  
Sbjct: 151 GVAVRAVMRLETS----CLDLCIGRFEDCAFECGQAGPVDSYERMAAGKTAALIGCCCGL 206

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           GA+ A A       L  FG  LG+ FQ  +DL
Sbjct: 207 GALAADAGDATIAALERFGRELGLAFQCVNDL 238


>gi|330961586|gb|EGH61846.1| octylprenyl diphosphate synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 205

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 6/110 (5%)

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
            +FE++    +     +    +LS    +  +G +  Q+  I+D    E     + + KT
Sbjct: 1   RSFEMMVELGS-----MEVMRILSKATRVIAEGEVL-QLSKIRDASTTEETYMEVIRGKT 54

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
             L   +  S A + +AS  + E LR FG++LG+ FQL DDLLD   D  
Sbjct: 55  AMLFEASTHSAAALCNASDAQTEALRTFGDHLGVAFQLVDDLLDYLGDAE 104


>gi|269103559|ref|ZP_06156256.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163457|gb|EEZ41953.1| putative octaprenyl-diphosphate synthase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 189

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           +S   N+  +G +  Q+++  D    E     +   KT  L   A +  AI+A AS   +
Sbjct: 1   MSAATNVIAEGEV-QQLMNCNDPDTTEESYMEVIYSKTARLFEAATQVAAIIAKASPEVE 59

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
              + +G  LG  FQL DD+LD   D  K+
Sbjct: 60  TAFQDYGRYLGTAFQLIDDVLDYVAD-GKE 88


>gi|123469801|ref|XP_001318110.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
 gi|121900861|gb|EAY05887.1| Polyprenyl synthetase family protein [Trichomonas vaginalis G3]
          Length = 338

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 18/238 (7%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL-VTECASL 64
            +K  E   +I   +D++ L+     Q QH       + Y + GGK +R  L V     L
Sbjct: 5   KAKFFEFKDKILEFIDEISLEWPDQKQQQH---FHDLVDYTIAGGKCLRGLLSVFGFLEL 61

Query: 65  FNVNH-----LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAII 118
              +        A  +G   E +    L+ DDL  MD   +RR KP  +   +   TA+ 
Sbjct: 62  TGYSPDSKEAEAAYALGWVQEILQASFLVADDL--MDKSPLRRDKPCWYCLQENKYTAVS 119

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
               L    + II          +  +  +    +I       GQ +D+  +        
Sbjct: 120 DSYFLENVLYMIIDKYFADFPVEVVLE--IKHLLHITTLRTALGQYIDMHKKEPTIDNWT 177

Query: 179 MIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENL---GIIFQLADDLLDCEE 232
           +    KT     +    SG + +     E  + + F + L   G++FQ  DD LD   
Sbjct: 178 LTVTNKTAYYTIWQPFLSGIVASQKIPAEVWQSKPFEDALIKAGVLFQCQDDWLDQYG 235


>gi|239978074|ref|ZP_04700598.1| polyprenyl diphosphate synthase [Streptomyces albus J1074]
          Length = 390

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 22/192 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF----NVNHLTAL 73
           T+L + L +  +       D      R+  LGG+++R  L+                 AL
Sbjct: 51  TLLAERLSEACATDPVSGRDIAERIARFTSLGGRRLRPALLWWALRACALPDGDRARAAL 110

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------------QYDEVTAIIAGN 121
           RVGAA+E +   +L+HDD+  MD+  +RRG+P +H+             +    A++AG+
Sbjct: 111 RVGAAVELLQTCALVHDDV--MDSSRLRRGRPALHVSLADQYGAAGTDLFAGAAAVLAGD 168

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
             L +A + ++   T+L D +R ++        G   M+ GQ LD+  +   +    +  
Sbjct: 169 LALAWAEDTLAE--TELPDPVRRRVRAVWRVMRG--EMVAGQYLDLHGQVTADRSALLAL 224

Query: 182 KMKTGALMCFAC 193
           +        ++ 
Sbjct: 225 RTARLKSAQYSA 236


>gi|66735446|gb|AAY53905.1| farnesyl pyrophosphate synthase [Panax notoginseng]
          Length = 343

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 89/244 (36%), Gaps = 23/244 (9%)

Query: 7   SKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           S L+     + ++L  +LL   A          +   + Y + GGK  R   V +   L 
Sbjct: 2   SDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61

Query: 66  NVNHLTAL-------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 +         +G  IE +  Y L+ DD+  MD+ + RRG+P           I 
Sbjct: 62  KEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFRLPKVGM-IA 118

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
             +G+L     I    K   +       +L L + +  Q    GQM+D+    + E  + 
Sbjct: 119 VNDGILLRN-HIPRILKKHFRQKPYYVDLLDLFNEVEFQTAC-GQMIDLITTLVGEKDLS 176

Query: 178 -------FMIQKMKTGALMCFACESGAIMAHASQNEKERL--RCFGENLGIIFQLADDLL 228
                    I + KT     +   + A++      EK  L  +     +G  FQ+ DD L
Sbjct: 177 KYSLPIHRRIVQYKTAYYSFYLPVACALLMSGEDLEKHLLDVKDILIEMGTYFQVQDDYL 236

Query: 229 DCEE 232
           DC  
Sbjct: 237 DCFG 240


>gi|156847950|ref|XP_001646858.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117539|gb|EDO19000.1| hypothetical protein Kpol_2002p71 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 352

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 92/246 (37%), Gaps = 31/246 (12%)

Query: 12  NSKRID---TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNV 67
            SK +D   T++++L      +   +   +     + Y   GGK  R   V +  ++   
Sbjct: 8   RSKFVDEFPTLVEELKQVLVKYGMPEEAIQWYEKNLNYNTPGGKLNRGLSVVDTYAILKG 67

Query: 68  ----------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TA 116
                      +     +G  +E +  Y L+ DD+  MD    RRG+P  +   D    A
Sbjct: 68  YNSVDDLSKDEYRRVAVLGWCVELLQAYFLVADDM--MDKSITRRGQPCWYRVEDVGEIA 125

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFID 173
           I     L    +E++   K   +       ++ L H++  Q    GQ+LD     +E +D
Sbjct: 126 INDAFMLEAAIYELL---KKYFRSESYYIDLIELFHDVTFQTE-MGQLLDLITAPEESVD 181

Query: 174 E-----TQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADD 226
                  +   I   KT     +   + A+    +    + ++ +     LG  FQ+ DD
Sbjct: 182 LSKFSLEKHSFIVIFKTAYYSFYLPVALAMYVAGNHDPKDLKQAQDVLIPLGEYFQIQDD 241

Query: 227 LLDCEE 232
            LDC  
Sbjct: 242 YLDCFG 247


>gi|267847005|gb|ACY80695.1| farnesyl pyrophosphate synthase [Cyclocarya paliurus]
          Length = 342

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 77/227 (33%), Gaps = 21/227 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL---TALRVGAA 78
           +L+              +   + Y + GGK  R   V +   L           + +  A
Sbjct: 18  ELIQDPDFDFTEDSRLWVERMLDYNVPGGKLNRGLSVIDSYKLLKEGKELTNDEIFLACA 77

Query: 79  ----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
               IE +  Y L+ DD+  MDN   RRG+P           I   +G++     I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWFRLPKVGM-IAVNDGIILRN-HIPRIL 133

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   ++      +L L + +       GQM+D+    + E  +          I + KT 
Sbjct: 134 KNHFREKNYYVDLLDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLSLHQRIVQYKTA 192

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                       +MA  +      ++     +G  FQ+ DD LDC  
Sbjct: 193 YYSFYLPVACALLMAGENLENHINVKNILIEMGNYFQVQDDYLDCYG 239


>gi|170115769|ref|XP_001889078.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636026|gb|EDR00326.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 363

 Score = 91.4 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 84/235 (35%), Gaps = 24/235 (10%)

Query: 17  DTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV---NHLTA 72
           + I D+L+   A   M  +  +   + + Y + GGK  R   V +   +      +    
Sbjct: 16  EVIRDELIGHFAGEGMPEEAVEWYRNNLNYNVPGGKLNRGMSVVDTVEILKGRALDEDEY 75

Query: 73  LRVGA---AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            +       IE +  Y L+ DD+  MD+   RR +P  +      T  I  + +L  A  
Sbjct: 76  FKAAVLGWCIELLQAYFLVADDI--MDSSITRRAQPCWYRLPSVGTVAINDSFMLEAAIY 133

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQ 181
            +   KT  +       +L L H         GQ++D+     D+  +          I 
Sbjct: 134 RL--LKTHFRGQAYYADLLDLFHET-TYQTEMGQLVDLITAPEDKVDLSKFSLARHHTIV 190

Query: 182 KMKTGALMCFACESGAIMAH----ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             KT     +   + A++      + ++     +     LG  FQ+ DD LD   
Sbjct: 191 IYKTAYYSFYLPVACAMLFSNIPSSDEHIYAHAKSILLPLGEYFQIQDDFLDYSA 245


>gi|325185255|emb|CCA19743.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 293

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 67/198 (33%), Gaps = 12/198 (6%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
           M +    ++L    Y   L GK IR  LV       NV   T+  +   +  +H  SL+ 
Sbjct: 1   MDSDMKHKILEPYEYICELPGKNIRGKLVDAFQLWLNVAPGTSKAIKTIVNGLHDASLLI 60

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   DN  +RRG+P  H  Y     I   N +   + +     +     +     ML 
Sbjct: 61  DDIE--DNSDLRRGRPVAHHIYGIPATINCANYVYFLSLQRCQELQNAEAMSTYVTEMLR 118

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           L    GL      Q            +   + K KTG L   A       +    +    
Sbjct: 119 LHQGQGLDIYWRDQCACP-----SIDEYLEMVKNKTGGLFRLAVGMLQAFSDCRTDFTPL 173

Query: 210 LRCFGENLGIIFQLADDL 227
           L        I FQ+ DD 
Sbjct: 174 LDLLS----IYFQIRDDY 187


>gi|322792499|gb|EFZ16466.1| hypothetical protein SINV_00774 [Solenopsis invicta]
          Length = 309

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 78/215 (36%), Gaps = 23/215 (10%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLF------NVNHLTALRVGAAIECIHCYSLIHDDL 92
           LL  + Y + GGK+ R+ ++     L         N   A  +    E +    L+ DD+
Sbjct: 2   LLQVLEYNVPGGKQFRALILIHAYQLLANEQVTKENIRLARILAWCGELMQAAGLMIDDI 61

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              D   +RRG+P  ++  +   ++I  + L      +    +   K       +L   H
Sbjct: 62  Q--DKSVLRRGQPCWYLNDNVGLSVIT-DALKLKN-SVYYILQKYFKGKTCYVNLLETFH 117

Query: 153 NIGLQGMLGGQMLDIQDEF----------IDETQVFMIQKMKT-GALMCFACESGAIMAH 201
           NI L+  L GQ+LD+Q                 Q   I + KT              +A 
Sbjct: 118 NIILK-TLDGQILDLQLSKNFSKKLNLNLFTMDQYKCIVRNKTSYYSFVCPVFLAMNLAG 176

Query: 202 -ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                + ++       +G +FQ+ DD LD   D  
Sbjct: 177 IKDPEKFKQAETILLEIGHLFQVQDDFLDFFGDSE 211


>gi|326516466|dbj|BAJ92388.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 408

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 89/242 (36%), Gaps = 23/242 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-- 65
           +   +  + + D+LL   A +     +    +   + Y + GGK  R   V +   L   
Sbjct: 70  ERFLRAYERLKDELLNDRAFNFDFTDETRQWVAKMLDYNVPGGKLNRGLSVIDSYMLLRE 129

Query: 66  -----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                + +   A  +G  IE +   +L+ DD+   DN Y RR     +       +    
Sbjct: 130 GTEVDDEDFYLACVLGWCIEWLQASALVLDDI--TDNAYTRRDNLCWYKLPTVGLS-AIN 186

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176
           +G+L     + +  K   K+      ++ L + IGLQ    GQMLD+             
Sbjct: 187 DGVLLKC-HVQAIIKRYFKEKFYFMELMELWNEIGLQ-TAMGQMLDLITTHTGAKDLARY 244

Query: 177 ----VFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                  I K KT             ++  A  ++   L+     +G+ FQ+ DD LDC 
Sbjct: 245 RIQGYRRIVKYKTSYYSFYPPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCF 304

Query: 232 ED 233
            D
Sbjct: 305 GD 306


>gi|13021724|gb|AAK11531.1| PaxG [Penicillium paxilli]
          Length = 371

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 87/233 (37%), Gaps = 17/233 (7%)

Query: 4   GLPSKLQENSKRIDTILD-DLLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTEC 61
           G P  L ++SK   TI    +L      +  Q+N  +   + Y L   GK IRS L+   
Sbjct: 40  GFPRLLSDSSKAPSTIRTVQVLEDDVDDIAIQYNKIVRGPLDYLLAIPGKDIRSKLIDSF 99

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                +       V   I  +H  SL+ DD+   D   +RRGKP  H  Y     I + N
Sbjct: 100 NIWLQLPEEKLSIVKDIINLLHTASLLIDDIQ--DASRLRRGKPVAHDVYGVAQTINSAN 157

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFM 179
                    +          I ++ +L          +  G  L  +D  +   E +   
Sbjct: 158 YAYYLQQARLKEIGDPRAFEIFTRSLLD-------LHLGQGMDLYWRDMVVCPTEEEYTR 210

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +   KTG L   A +   I +  + +         E LG+IFQ+ DD ++ + 
Sbjct: 211 MVMYKTGGLFNLALDLMRIQSRKNTD----FSKLVELLGVIFQIRDDYMNLQS 259


>gi|301103047|ref|XP_002900610.1| geranylgeranyl pyrophosphate synthetase [Phytophthora infestans
           T30-4]
 gi|262101873|gb|EEY59925.1| geranylgeranyl pyrophosphate synthetase [Phytophthora infestans
           T30-4]
          Length = 296

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 73/203 (35%), Gaps = 21/203 (10%)

Query: 34  QHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           ++  +LL    Y + L GK +R  ++    S           + + ++ +H  SL+ DD+
Sbjct: 7   ENESKLLEPYAYISELPGKNVRGRMIGAFQSWLRAPTEAVESIQSIVDQLHNASLLIDDI 66

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              D+  +RRG+P  H  +     I   N +   + +   +        + +  ML L  
Sbjct: 67  E--DDSEMRRGQPVAHHIFGVPATINCANYVYFLSLQKCQALGNPRALQVYTDEMLRLHQ 124

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN---EKER 209
             GL       +           +   + + KTG L   A       + ++ +       
Sbjct: 125 GQGLDIFWRDHLQCP-----TVDEYLEMVQNKTGGLFRLAVGLMQAFSDSTMDFTPLVNA 179

Query: 210 LRCFGENLGIIFQLADD---LLD 229
           L  +       FQ+ DD   LLD
Sbjct: 180 LAVY-------FQIRDDYVNLLD 195


>gi|150865549|ref|XP_001384814.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS
           6054]
 gi|149386805|gb|ABN66785.2| geranylgeranyl diphosphate synthase [Scheffersomyces stipitis CBS
           6054]
          Length = 347

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 28/234 (11%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRY-ALLGGKK--IRSFLVTECASL-FNVNHLTALRV-G 76
           D+L++  +      N+ +    RY A + G    +R   +     L F++     L   G
Sbjct: 9   DVLIRPVNGYDRPENEPISEPYRYLAEIPGNNSNVRGKFLEAFNRLYFHIEQKPLLDAIG 68

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE------- 129
             I   H  SL+ DD+   D+   RRG P  H +Y     I  GN +   A +       
Sbjct: 69  DIISIFHNASLLIDDIE--DSSEYRRGFPAAHTKYGIPLTINCGNLMYFVALQKAQITLP 126

Query: 130 -IISSPKTQLKDNI-RSQLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQ--------VF 178
            + S   + L+ +I + +   S      +  +  GQ LD    +++ ETQ          
Sbjct: 127 RLYSDLNSDLEIDIDKLKFETSQILIDEMLNLHHGQGLDIYWRDYLPETQESLPSVQDYL 186

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            + K KTG L   + +  A+    S+ E   L      LGII+Q+ DD L+   
Sbjct: 187 SMVKDKTGGLFRLSIKLLALF---SKRETTDLIPIANLLGIIYQVRDDYLNLTS 237


>gi|224010788|ref|XP_002294351.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220969846|gb|EED88185.1| geranylgeranyl diphosphate synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 349

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 15/199 (7%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLP 93
           + +LL    Y   + GK +R  L+        V     L  V A +  +H  SL+ DD+ 
Sbjct: 16  DKQLLEPYLYINGVPGKDVRGKLIDCFQLWLGVESEGVLEEVKAIVADLHNASLLIDDIE 75

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             DN  +RRG+P  H  +   + I   N +   A E      ++    +    ML+L   
Sbjct: 76  --DNSKLRRGQPVAHSIFGVASVINTANYVYFMALERCFLLGSEGAMKVFVSEMLNLHRG 133

Query: 154 IGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
                   GQ +  +D      E+Q   +   KTG L   A   G + + A++ +     
Sbjct: 134 -------QGQDIQWRDTTTCPTESQYLAMVTDKTGGLFRLAV--GLLQSFATKMKDVDFV 184

Query: 212 CFGENLGIIFQLADDLLDC 230
               NLG+ FQ+ DDL++ 
Sbjct: 185 PLVNNLGLYFQIRDDLINL 203


>gi|115461044|ref|NP_001054122.1| Os04g0657300 [Oryza sativa Japonica Group]
 gi|39545740|emb|CAE75966.1| OSJNBa0071I13.18 [Oryza sativa Japonica Group]
 gi|113565693|dbj|BAF16036.1| Os04g0657300 [Oryza sativa Japonica Group]
 gi|125550054|gb|EAY95876.1| hypothetical protein OsI_17742 [Oryza sativa Indica Group]
          Length = 407

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 87/242 (35%), Gaps = 23/242 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASLF-- 65
               +  + +  +LL   A +       R  +   + Y + GGK  R   V +   L   
Sbjct: 69  DRFVRAYERLKSELLNDRAFNFDFTEETRQWVAKMMDYNVPGGKLNRGLSVVDSYMLLRQ 128

Query: 66  -----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
                + +   A  +G  +E +   +L+ DD+   DN Y RR     +       +    
Sbjct: 129 GTEVDDEDFYLACVLGWCVEWLQASALVLDDI--TDNAYTRRDNLCWYKLPTVGMS-AIN 185

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ---- 176
           +G+L     + +  K   K+      ++ L + IGLQ    GQMLD+             
Sbjct: 186 DGVLLKC-HVQAIIKRYFKEKFYFLDLMELWNEIGLQ-TAMGQMLDLITTHTGAKDLARY 243

Query: 177 ----VFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                  I K KT             ++  A  ++   L+     +G+ FQ+ DD LDC 
Sbjct: 244 RIQGYRRIVKYKTSYYSFYLPVACALLLNGARLSDYVELKNVLIEMGVYFQIQDDYLDCF 303

Query: 232 ED 233
            D
Sbjct: 304 GD 305


>gi|308801677|ref|XP_003078152.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri]
 gi|116056603|emb|CAL52892.1| farnesyl pyrophosphate synthase (ISS) [Ostreococcus tauri]
          Length = 346

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 85/254 (33%), Gaps = 30/254 (11%)

Query: 1   MNGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           M+        E  + + D ++ D +      +  +   R++    Y +  GK  R   V 
Sbjct: 1   MSSDEKRVFMEVFRELADGLVRDEVEDNQVSIAVEWIKRMIE---YNVPHGKLNRGLAVV 57

Query: 60  ECASLFNV---------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           +                    A+ VG  IE +  Y L+ DD+  MD    RRG+P  + Q
Sbjct: 58  DGVRALKAANGEEPSADELKRAMVVGWCIEFLQAYFLVADDI--MDESVTRRGQPCWYRQ 115

Query: 111 YDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            D   TAI  G  L    ++ +      L+       ++ L H++       GQ++D+  
Sbjct: 116 PDVKMTAINDGILLEMMLYKCLKKYCKGLEC---YHDLVELFHDV-TYQTASGQLIDLIT 171

Query: 170 EFI--------DETQVFMIQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGI 219
             I               I   KT              +     +    +       LG 
Sbjct: 172 APIGIVDLSKYTMEAYMRIVTYKTAFYTFYLPAACAMRLCGVKDEAAYSKANEICIKLGQ 231

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD LDC  D
Sbjct: 232 FFQIQDDYLDCYGD 245


>gi|242791472|ref|XP_002481764.1| farnesyl-pyrophosphate synthetase [Talaromyces stipitatus ATCC
           10500]
 gi|218718352|gb|EED17772.1| farnesyl-pyrophosphate synthetase [Talaromyces stipitatus ATCC
           10500]
          Length = 347

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 82/234 (35%), Gaps = 22/234 (9%)

Query: 16  IDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLV-----TECASLFNVNH 69
           +  ++ D+L  T  + +          ++   ++GGK  R   V                
Sbjct: 14  VHPLIKDILEATEQYNLPENARKWFSDSLNANIVGGKMNRGMSVPDTGSILLGRPLTDEE 73

Query: 70  LTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
              L + G   E +  + L+ DD+  MD    RRG+P  + +       I    +L  A 
Sbjct: 74  KKHLSLLGWFTELLQAFFLVSDDI--MDGSITRRGQPCWYRREGVGMIAINDAFMLESAI 131

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD----IQDE----FIDETQVFMI 180
            +I   K   + +     +L L H    Q  L GQ+ D     +D          +   I
Sbjct: 132 YVI--LKKYFRSHPAYTDLLELFHETTWQTEL-GQLCDLITAPEDHVDLNNFSMEKYTFI 188

Query: 181 QKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            K KT     +   + A+  +  A+    ++       LG  FQ+ DD LD   
Sbjct: 189 VKYKTAYYSFYLPVTLALHYLQVATPKNLKQCEDILIPLGEYFQIQDDYLDAFG 242


>gi|332220681|ref|XP_003259483.1| PREDICTED: farnesyl pyrophosphate synthase [Nomascus leucogenys]
          Length = 419

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 88/257 (34%), Gaps = 30/257 (11%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +T     RL   + Y  +GGK  R
Sbjct: 67  MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 126

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +    L+ DD+  MD+   RRG+   
Sbjct: 127 GLAVVVAFRELVEPRKQDADSLQRAWTVGWCVELVRGXLLVADDI--MDSSLTRRGQICW 184

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 185 YQKPGVGLDAINDANLLEACVYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 240

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 241 LITAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHTNAKKILLE 300

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LD   D
Sbjct: 301 MGEFFQIQDDYLDLFGD 317


>gi|71020751|ref|XP_760606.1| hypothetical protein UM04459.1 [Ustilago maydis 521]
 gi|46100494|gb|EAK85727.1| hypothetical protein UM04459.1 [Ustilago maydis 521]
          Length = 396

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 79/237 (33%), Gaps = 38/237 (16%)

Query: 25  LQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           L +         + +L    Y     GK++R+ L+        V       +   +  +H
Sbjct: 33  LSSQPAWPADKENAILEPYTYLDSNPGKEVRTKLIEAFNVWLQVPTRKLDAICNVVRMLH 92

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   DN  +RRG P  H  Y     I   N +    F  I            
Sbjct: 93  TASLLMDDVE--DNSDLRRGIPVAHKIYGIPQTINTANYVYFLVFSEIFRMNEDSTSASA 150

Query: 144 SQLMLSLTHNIGLQG----------------MLGGQMLD--IQDEFI--DETQVFMIQKM 183
               LS    + + G                +  GQ +D   +D  I   E +   +   
Sbjct: 151 ESPPLSPHSTLAVNGVPRATVERLVVDELINLHRGQGMDLLWRDSLICPTEEEYVEMVNN 210

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFG--------ENLGIIFQLADDLLDCEE 232
           KTG L   A +   +++ +        R  G          +G++FQ+ DD ++ + 
Sbjct: 211 KTGGLFRIAVKL--MLSQSP-----AARSVGFPELIPMVNLIGLLFQILDDFMNLQS 260


>gi|168203179|gb|ACA21460.1| farnesyl diphosphate synthase 4 [Picea abies]
          Length = 347

 Score = 90.6 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 87/247 (35%), Gaps = 26/247 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + +K +E    +      +L   A          +   + Y + GGK  R   V +   
Sbjct: 8   DVKTKFEEIYLELKA---QILNDPAFDYTEDARQWVEKMLDYTVPGGKLNRGLSVIDSYR 64

Query: 64  LFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-T 115
           L       +         +G  IE +  Y LI DD+  MD+ + RRG+P           
Sbjct: 65  LLKAGKEISEDEVFLGCVLGWCIEWLQAYFLILDDI--MDSSHTRRGQPCWFRLPKVGLI 122

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFI 172
           A+  G  L  +   I+   K   +       +L L + +       GQ+LD     +   
Sbjct: 123 AVNDGILLRNHICRIL---KKHFRTKPYYVDLLDLFNEVE-FQTASGQLLDLITTHEGAT 178

Query: 173 DETQVFM-----IQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D ++  M     I + KT             +MA  + +    ++     +G  FQ+ DD
Sbjct: 179 DLSKYKMPTYVRIVQYKTAYYSFYLPVACALVMAGENLDNHVDVKNILVEMGTYFQVQDD 238

Query: 227 LLDCEED 233
            LDC  D
Sbjct: 239 YLDCFGD 245


>gi|317143053|ref|XP_001818809.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
          Length = 384

 Score = 90.6 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 16/186 (8%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR   +    S   V   ++  + + I  +H  SL+ DD+   DN   RRG PT H  
Sbjct: 104 KNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDIE--DNSVPRRGSPTAHTL 161

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I + N     AFE +   ++     +  + +         + +  GQ LD+  +
Sbjct: 162 FGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQL---------KNLHCGQGLDLYWK 212

Query: 171 FIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +        +   +   KTG             +       +  R F   LG  FQ+ DD
Sbjct: 213 YNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDA-RRFVTLLGRYFQIRDD 271

Query: 227 LLDCEE 232
             +   
Sbjct: 272 YQNLTS 277


>gi|83766667|dbj|BAE56807.1| unnamed protein product [Aspergillus oryzae]
          Length = 362

 Score = 90.6 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 16/186 (8%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR   +    S   V   ++  + + I  +H  SL+ DD+   DN   RRG PT H  
Sbjct: 82  KNIRETFIDALNSWLEVPAASSTSIKSIIGMLHHSSLMLDDIE--DNSVPRRGSPTAHTL 139

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I + N     AFE +   ++     +  + +         + +  GQ LD+  +
Sbjct: 140 FGVGQTINSANYTFVCAFEELQKLQSPNAIGVFIEQL---------KNLHCGQGLDLYWK 190

Query: 171 FIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +        +   +   KTG             +       +  R F   LG  FQ+ DD
Sbjct: 191 YNTHVPTADEYMTMIDHKTGGPFRLCVRLMQGESSGKTEHIDA-RRFVTLLGRYFQIRDD 249

Query: 227 LLDCEE 232
             +   
Sbjct: 250 YQNLTS 255


>gi|145344237|ref|XP_001416643.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576869|gb|ABO94936.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 348

 Score = 90.6 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 74/217 (34%), Gaps = 26/217 (11%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNV---------NHLTALRVGAAIECIHCYSL 87
           + +   I Y +  GK  R   V +                    A+ VG  IE +  Y L
Sbjct: 37  EWIKRMIDYNVPHGKLNRGLAVVDGVRALKAAKNETVDEEELKRAMVVGWCIEFLQAYFL 96

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           + DD+  MD    RRG+P  + Q D   TAI  G  L    ++ +      L+       
Sbjct: 97  VADDI--MDESVTRRGQPCWYRQPDVKMTAINDGILLEMMLYKCLKKYCKGLEC---YAD 151

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--------DETQVFMIQKMKTG-ALMCFACESGA 197
           ++ L H++       GQ++D+    I               I   KT             
Sbjct: 152 LVELFHDV-TYQTASGQLIDLITAPIGVVDLSKYTMEAYMRIVTYKTAFYTFYLPAACAM 210

Query: 198 IMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +     +   E+       LG  FQ+ DD LDC  D
Sbjct: 211 RLCGVKDEAAYEKANEICIKLGQFFQIQDDYLDCYGD 247


>gi|34499413|ref|NP_903628.1| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
           12472]
 gi|34332897|gb|AAQ61620.2| octaprenyl-diphosphate synthase [Chromobacterium violaceum ATCC
           12472]
          Length = 379

 Score = 90.6 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 82/255 (32%), Gaps = 32/255 (12%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHND---RLLSAIRYALL-GGKKIRSFLVTE 60
           +P++L+    RID  +   +         + +    R+   +R+ L   GK++       
Sbjct: 1   MPAELERLRGRIDECIAAAIESLREDGPERGHPLIGRVYGWLRHYLDCDGKRMHGIAAAL 60

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI----------- 109
                       L V AA++  H ++L+HDD+   D    RRG PTVH            
Sbjct: 61  AHLACGGGEDAILPVAAAMQLYHHHTLVHDDI--YDEDAARRGWPTVHQAFAGWFADRRG 118

Query: 110 --------------QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
                         +   +TA   G      A  ++          +     L   H   
Sbjct: 119 SEEGVGRVFSGGAMRRGAITAFAYGKICRALAGRLLLESGFDQAAVLDVARALER-HEFF 177

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                   +    DE            +KTG L      +GA +A A     + L  +  
Sbjct: 178 DNAAQLKDVFHEGDEMPSPQACLDNAWLKTGRLFELCAYAGARLAGAEAGRTKALERWAG 237

Query: 216 NLGIIFQLADDLLDC 230
              + +QL DDL D 
Sbjct: 238 QSALAYQLQDDLEDL 252


>gi|119493680|ref|XP_001263940.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
 gi|119412101|gb|EAW22043.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
          Length = 294

 Score = 90.6 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 29/217 (13%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL--LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           DL  Q     +   + +++SA    L    GK IR  L+            +A  +   +
Sbjct: 58  DLQQQRKFTQEKAPSHQIISAPLDYLCSFPGKDIRGKLI------------SAFVIKRVV 105

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I + N    +A + +        
Sbjct: 106 GLLHSASLLIDDIQ--DSSKLRRGFPVAHSIFGVAQTINSANFAYFFAQQELQKLGKPEA 163

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
             I ++ ML L    G+        L  +D  I   E +   +   KTG L   A +   
Sbjct: 164 LVIFTEEMLRLHRGQGM-------DLYWRDSLICPTEEEYLEMVANKTGGLFRLAIKLMQ 216

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
           + +  +++    +      LGIIFQ+ DD  + + DL
Sbjct: 217 MESQNTKDCVPLVD----LLGIIFQIRDDYQNLQSDL 249


>gi|323454203|gb|EGB10073.1| hypothetical protein AURANDRAFT_59945 [Aureococcus anophagefferens]
          Length = 326

 Score = 90.6 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 75/201 (37%), Gaps = 15/201 (7%)

Query: 36  NDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           ++ LL    Y +   GK +R  L+        +       +   +  +H  SL+ DD+  
Sbjct: 8   DEALLEPFNYISENPGKNVRGSLIDAFNMWLGIPGDRVEAIKRIVSRLHNASLLVDDIE- 66

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            D   +RRGKP  H  +   + +   N +   A E            +  + +L+L    
Sbjct: 67  -DGSQLRRGKPVAHAIFGVPSTLNTANYVYFIALEECHRLDNGEALAVFVEELLNLHRG- 124

Query: 155 GLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
                  GQ +  +D      E +   +   KTG L   A     +MA  S   K   R 
Sbjct: 125 ------QGQDILWRDSCRCPTEAEYTTMVLDKTGGLFRLAV---GMMAAFSDRRKGEFRK 175

Query: 213 FGENLGIIFQLADDLLDCEED 233
             + L + FQ+ DDL++   D
Sbjct: 176 LVDLLALYFQIRDDLVNLRSD 196


>gi|294997085|dbj|BAJ05823.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae]
          Length = 412

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 78/215 (36%), Gaps = 15/215 (6%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DL               + +   Y A   GK  RS L+    +L  V       +  A+
Sbjct: 114 EDLNFTPKRSWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLQVPPSRLDIITTAV 173

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I + N +     + +        
Sbjct: 174 GMLHDSSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANFIYYAQLQELQKLGNPSI 231

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
            ++ +  ++SL    G+        L  +D+     E     +   KTG L     +   
Sbjct: 232 ISVFADELVSLHRGQGM-------DLFWRDKLTCPTEDDYLEMVGNKTGGLFRLGIKLMQ 284

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + +S  +   L      +G+IFQ+ DD ++   
Sbjct: 285 AESPSSSLDCVPLVNL---IGLIFQIRDDYMNLSS 316


>gi|322699696|gb|EFY91456.1| geranylgeranyl diphosphate synthase [Metarhizium acridum CQMa 102]
          Length = 429

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 78/215 (36%), Gaps = 16/215 (7%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           +DL               + +   Y A   GK  RS L+    +L  V       +  A+
Sbjct: 123 EDLNFTPRRCWTDDKEKVVRAPFEYVASHPGKDFRSQLINAFNALLRVPPGRLEIITRAV 182

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D+  +RRG P  H  +     I + N +   A + +        
Sbjct: 183 GMLHESSLLVDDVQ--DSSELRRGFPVAHNIFGVPQTINSANYIYFVALQELQKLGNPSS 240

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
            ++ +  +++L    G+        L  +D      E     +   KTG L     +   
Sbjct: 241 ISVFADELVNLHRGQGM-------DLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQ 293

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             + AS  +   L      +G+IFQ+ DD ++   
Sbjct: 294 AES-ASDLDCVPLVNL---IGLIFQIRDDYMNLSS 324


>gi|293189826|ref|ZP_06608540.1| polyprenyl synthetase [Actinomyces odontolyticus F0309]
 gi|292821241|gb|EFF80186.1| polyprenyl synthetase [Actinomyces odontolyticus F0309]
          Length = 367

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 88/250 (35%), Gaps = 41/250 (16%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL---R 74
           T L  LL +  +  +++   R   A+  ++ GGK+ R+ +     +L +   +  +    
Sbjct: 20  TSLAHLLARAGTSDRSEEFSR---AVLASVSGGKRFRALMAHVGYALSSGTSIEEVSLPH 76

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAII 118
           + AA+E     +L+HDD+  +D    RRG P+ H                  +    AI+
Sbjct: 77  LSAALELYQASALVHDDI--IDKADERRGMPSPHRTLANYHTAQSWIGSSTDFGRHGAIL 134

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET--- 175
            G+ L + A          L+++       S         +  GQ LDI  E        
Sbjct: 135 VGDFLFSAATAAADEQALTLRED--CARAFSRRFADMHAEVALGQYLDITAEQTPLDPER 192

Query: 176 -------QVFMIQKMKTG-ALMCFACESGAIMAHAS----QNEKERLRCFGENLGIIFQL 223
                      +   K+    +      GAI   +S     +  + L       G+ FQL
Sbjct: 193 TDALSTSDSLEVALHKSAHYSVVHPALLGAICGASSFDRVADLLDVLETLLTPWGLAFQL 252

Query: 224 ADDLLDCEED 233
            DD L    D
Sbjct: 253 RDDDLGVFGD 262


>gi|332671664|ref|YP_004454672.1| polyprenyl synthetase [Cellulomonas fimi ATCC 484]
 gi|332340702|gb|AEE47285.1| Polyprenyl synthetase [Cellulomonas fimi ATCC 484]
          Length = 367

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 24/252 (9%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND-RLLSAIRYALLGGKKIRSFLVTE 60
              L   +++ ++   + L DLL++ A       +  R+L     + LGGK +R  L   
Sbjct: 16  TAALAHAVEDATRLATSTLQDLLVERAVRAGRHADAARVLWEDLASTLGGKLMRPRLTAA 75

Query: 61  CASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPS----------MDNGYIRRGK----P 105
                    L A+  V AA E +H   L+HDD+            +     RRG     P
Sbjct: 76  AYLGLGGTDLGAVAPVAAAQEVLHVAMLVHDDVLDHDDVRRGRLNVSGAARRRGLTRGLP 135

Query: 106 TVHI-QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
            V          I+AG+  L  AF +++          R   +L+     G++  + G++
Sbjct: 136 AVDADAQALAAGILAGDLALASAFRLVARTPVPGDVRERLTDLLAD----GVETAVAGEL 191

Query: 165 LDIQDEFIDETQV--FMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           LD+  E +    V   ++  +KT          SGA++A A ++   RL      LG+ F
Sbjct: 192 LDVASETLAPADVDALLVAALKTAEYSCRVPLASGAVLAGADEDVLRRLDDVAAALGLAF 251

Query: 222 QLADDLLDCEED 233
           QL DD L    D
Sbjct: 252 QLTDDDLGVFGD 263


>gi|254566651|ref|XP_002490436.1| Farnesyl pyrophosphate synthetase [Pichia pastoris GS115]
 gi|238030232|emb|CAY68155.1| Farnesyl pyrophosphate synthetase [Pichia pastoris GS115]
 gi|328350830|emb|CCA37230.1| dimethylallyltranstransferase [Pichia pastoris CBS 7435]
          Length = 354

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 78/229 (34%), Gaps = 28/229 (12%)

Query: 31  MQTQHNDRLLSAIRYALLGGKKIRSFLVTECA----------SLFNVNHLTALRVGAAIE 80
           M     +    ++ Y   GGK  R   V +             L       A  +G  +E
Sbjct: 33  MPADAINWFKRSLNYNTPGGKLNRGISVVDTYVILKGYKSWDELSAEEFKKAAILGWCVE 92

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +  Y L+ DD+  MD    RRG+P  +   +     I  + +L  A   I   +   K 
Sbjct: 93  LLQAYFLVADDM--MDQSITRRGQPCWYKVENVGNIAINDSFMLEGAIYKI--LRKYFKK 148

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF--------MIQKMKTGAL-MCF 191
                 +L L H +  Q  L GQ+LD+     D   +          I   KT       
Sbjct: 149 ESYYADLLDLLHEVTFQTEL-GQLLDLITAPEDHVDLSKFTPAKHSFIVIFKTAYYSFYL 207

Query: 192 ACESGAIMAHASQN-EKERLRCFGENLGIIFQLADDLLDCEE---DLPK 236
                  ++  +   + ++       LG  FQ+ DD LDC     D+ K
Sbjct: 208 PVVMAMYLSGITHEKDLQQAEHILIPLGEYFQIQDDYLDCFGKPEDIGK 256


>gi|317156125|ref|XP_001825412.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
          Length = 692

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 9/210 (4%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           +       ++   ++L + IR   L  K +R   V        + +    RV +  E +H
Sbjct: 387 IDAIEEEAESPKPEQLGTEIRS--LPSKGVREAFVDAMNVWLVLPNDVVNRVKSIAETLH 444

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   D+  +RRG+P  H  + +   I + N LL  A   +     Q   ++ 
Sbjct: 445 NASLLLDDIE--DSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMHQVRQLDNQRCMDVF 502

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHAS 203
            + M +L       G         Q E   + +   +   KTG L           A   
Sbjct: 503 VEEMRNLF-----IGQSFDLYWTRQGECPSQDEYLEMISQKTGGLFRLLTRLMTEKASTQ 557

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
            N    L      LG  FQ+ DD  +  ED
Sbjct: 558 HNSTITLDSLVSLLGQYFQIRDDYKNLTED 587


>gi|115437522|ref|XP_001217832.1| farnesyl pyrophosphate synthetase 1 [Aspergillus terreus NIH2624]
 gi|114188647|gb|EAU30347.1| farnesyl pyrophosphate synthetase 1 [Aspergillus terreus NIH2624]
          Length = 347

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 80/242 (33%), Gaps = 20/242 (8%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LV 58
           + +    + +  +L      H     +       L  A+   + GGK  R        L 
Sbjct: 4   KTDRAAFEAVFTELAQDILDHAKKYNLPDNAMQWLEKALNVNVPGGKLNRGLSVPDTGLA 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAI 117
                L +        +G   E +  + L+ DD+  MD+   RRG+P  + Q      AI
Sbjct: 64  LLKKPLTDEQFKHLSMLGWLTELLQAFFLVSDDI--MDSSITRRGQPCWYRQPGVGLIAI 121

Query: 118 IAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFID 173
                L +  + I+           D I      +    +G L  ++     ++  +   
Sbjct: 122 NDAFMLESGIYLILKKYFRSHPAYVDLIELFHETTWQTELGQLCDLITAPEDNVNLDNFS 181

Query: 174 ETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +   I   KT     +   + A+  +  A+    ++       LG  FQ+ DD LD  
Sbjct: 182 MEKYMFIVTYKTAYYSFYLPVALALHYLQLATPQNLQQAHDILIPLGQYFQVQDDYLDAY 241

Query: 232 ED 233
            D
Sbjct: 242 GD 243


>gi|145233581|ref|XP_001400163.1| geranyltranstransferase [Aspergillus niger CBS 513.88]
 gi|134057095|emb|CAK44383.1| unnamed protein product [Aspergillus niger]
          Length = 346

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 76/230 (33%), Gaps = 16/230 (6%)

Query: 18  TILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIRSF------LVTECASLFNVNHL 70
           ++ +DLL     +   Q+  +    A+   + GGK  R        L      L +    
Sbjct: 15  SLREDLLNYAKQYKLPQNALEWFEKALNVNVPGGKLNRGLSVPDTGLALLKKPLTDEQFK 74

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
               +G   E +  + L+ DD+  MD    RRG+P  +        AI     L +  + 
Sbjct: 75  HLSLLGWLTELLQAFFLVSDDI--MDGSITRRGQPCWYKHEGVGLIAINDAFLLESGIYI 132

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKT 185
           I+          I    +   T      G L   +   +D    +     +   I   KT
Sbjct: 133 ILKKYFRSHPAYIDLVELFHETTYQTELGQLCDLITAPEDNVNLDNFSMEKYMFIVTYKT 192

Query: 186 GALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                +   + A+  +  A+     +       LG  FQ+ DD LD   D
Sbjct: 193 AYYSFYLPVALALHYLQLATPENLRQAHDILIPLGQYFQVQDDYLDAYGD 242


>gi|209408510|emb|CAR64517.1| geranyltranstransferase [Gilbertella persicaria]
          Length = 350

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 81/232 (34%), Gaps = 22/232 (9%)

Query: 18  TILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------NHL 70
           T+ D++L +   + M     +     + Y + GGK  R   V +   +         +  
Sbjct: 19  TLADEILAEVRKYNMPEDAYEWTKKMLYYNVPGGKLNRGISVVDTVRILKGESVTEDDIF 78

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  +E +  + L+ DD+  MD    RRG+P  +         I    +L     I
Sbjct: 79  KATVLGWLVEFLQAFFLVSDDI--MDASITRRGQPCWYKADGVGMVAINDAFILEACIYI 136

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK 182
               K   K       ++ L   +  Q  L GQ+ D+     D   +          I  
Sbjct: 137 F--LKKYFKKTDYYIELVELFQEVTFQTEL-GQLCDLITAPEDNVDLSKFSVKKHQFIVI 193

Query: 183 MKTGALMCFACESGAI-MAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
            KT     +   + A+ M      E  ++       LG  FQ+ DD LDC  
Sbjct: 194 YKTAYYSFYLPVALAMHMVGVKNEEAFKQAHDILIPLGEYFQVQDDYLDCYG 245


>gi|66815945|ref|XP_641989.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4]
 gi|74856499|sp|Q54XP1|Y8823_DICDI RecName: Full=Probable farnesyl diphosphate synthase DDB_G0278823;
           AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
           AltName: Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|60470032|gb|EAL68013.1| hypothetical protein DDB_G0278823 [Dictyostelium discoideum AX4]
          Length = 356

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 87/256 (33%), Gaps = 27/256 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDR-----LLSAIRYALLGGKKIRS 55
           MN  L    +E  +    +   LL +    ++     +     + + I+    GGK  R 
Sbjct: 1   MN-NLKKNDKEVLEEFANLFPILLNEIKKELEKIDFPKESIHWIETVIKANSTGGKMNRG 59

Query: 56  FLVTECASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
             V E     N            A  +G  +E      L+ DD+  MD    RRGKP  +
Sbjct: 60  ISVLESLESLNEGRALTRHEIFQAQTLGWCVEIFQACYLVSDDI--MDQSLKRRGKPCWY 117

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISS----PKTQLKDNIRSQLMLSLTHNIGLQGMLGG-- 162
            Q    +    G   +  +F I S      +   K+      ++ L H  G Q  LG   
Sbjct: 118 KQKRPNSDQEVGLAAINDSFIIESCVFILLEKYFKNESYYLNIVELFHKTGFQTQLGQLL 177

Query: 163 ----QMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGEN 216
               Q +      I+      I + KT      F      +M+  +  +     +     
Sbjct: 178 DLTTQPIRGDFSSINLKNHTRITEYKTAYYSFFFPVALAMLMSKINHEQAFTTAKDILLP 237

Query: 217 LGIIFQLADDLLDCEE 232
           +G+ FQ+ DD LDC  
Sbjct: 238 MGVYFQVQDDFLDCYG 253


>gi|322800773|gb|EFZ21659.1| hypothetical protein SINV_04639 [Solenopsis invicta]
          Length = 348

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNHL 70
            I+ D+     +         +    +Y +  GKK+R   + +          L   N  
Sbjct: 18  DIVQDITEAARNLNIPDVAKWMEKVSQYTVPKGKKLRGLTLIKVYKSLVSNDQLTEDNIR 77

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
               +   +E +  Y L+ DD+   D+  +RRG+P  H+  +    A+  G  L +  + 
Sbjct: 78  LVQILAWCVELMQTYILVLDDIQ--DHSLLRRGQPCWHLYSNVGEAAVNDGVLLESAMYY 135

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---------DETQVFMI 180
           II       +  +     L  T    +   L GQ +D+                 +   I
Sbjct: 136 IIRKHFKGKECYVN----LVETFQDIIFKTLMGQCMDLYSSNFGKKPNLDLFTIDRHNTI 191

Query: 181 QKMKTGA-LMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            ++KT          +    A   +     + +     +G +FQ+ DD LDC  D  
Sbjct: 192 IEIKTAYYTYVLPTFAAMHFAGIKNPEMFRQAKIIALEIGHMFQVQDDYLDCFGDTE 248


>gi|70995862|ref|XP_752686.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
 gi|42820719|emb|CAF32032.1| geranylgeranyl pyrophosphate synthetase, putative [Aspergillus
           fumigatus]
 gi|66850321|gb|EAL90648.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
 gi|159131440|gb|EDP56553.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus A1163]
          Length = 387

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 75/206 (36%), Gaps = 16/206 (7%)

Query: 28  ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
                 ++   L+    Y     GK IR  L+T       V   +   +   +  +H  S
Sbjct: 67  DGKWSQEYEKILMGPYDYMQQHPGKDIRRQLITAFNVWLQVRPESLSIITKVVGMLHTAS 126

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+   DN  +RRG P  H  +     I + N +   A + +         +I  Q 
Sbjct: 127 LLVDDVE--DNSILRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQE 184

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +L+L    G+        L  +D      E     +   KTG L   A +     +  + 
Sbjct: 185 LLNLHRGQGM-------DLFWRDTLTCPTEEDYLDMVGNKTGGLFRLAIKLMQAES-TTG 236

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
            +   L      +G+IFQ+ DD L+ 
Sbjct: 237 IDCVSLVNV---MGLIFQICDDYLNL 259


>gi|256752080|ref|ZP_05492948.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749090|gb|EEU62126.1| polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 124

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            ++  I + KT AL+  +  +GA +A A++ +   LR +   +G  FQ+ DD+LD   + 
Sbjct: 1   EELKFIHEHKTAALIEASVCAGAYIAGATEEDIHALREYARLIGFAFQIKDDILDVIGEE 60

Query: 235 PK 236
            K
Sbjct: 61  EK 62


>gi|154337619|ref|XP_001565042.1| farnesyl pyrophosphate synthase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062082|emb|CAM45189.1| farnesyl pyrophosphate synthase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 362

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 93/262 (35%), Gaps = 38/262 (14%)

Query: 11  ENSKRIDTILDDLLL---QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           E  +R+   +   LL   +    M       L   +    LGGK  R   V + A     
Sbjct: 5   ERFQRVYEEVQGFLLSDVEKRFEMDVHRKRYLKDMMDTTCLGGKYNRGLCVVDVAEAMAK 64

Query: 68  NH-------LTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT- 115
           +           L         IE +  + L+ DD+  MDN   RRG+P  ++     T 
Sbjct: 65  DARMDAAAMERTLHDACVCGWMIEMLQAHFLVEDDI--MDNSKTRRGRPCWYLHPGVTTQ 122

Query: 116 -AIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIG----LQGMLGGQMLDI 167
            AI  G  LL +A ++     + +  L + +R    +  T  IG    +  M+    LD 
Sbjct: 123 VAINDGLILLAWATQVALHYFADRPFLAEVLRVFHDVDFTTTIGQLYDVTSMVDSAKLDA 182

Query: 168 QDEFIDETQV--------FMIQKMKTG-ALMCFACESGAIMAHASQN-EKERLRCFGENL 217
                + T            I   KT           G +++  ++  +KE        +
Sbjct: 183 NVAHANTTDYVEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTAEKVDKEVTHKVSMVM 242

Query: 218 GIIFQLADDLLDCE---EDLPK 236
           G  FQ+ DD++DC    E L K
Sbjct: 243 GEYFQVQDDVMDCFTSPEKLGK 264


>gi|67541280|ref|XP_664414.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4]
 gi|40739019|gb|EAA58209.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4]
 gi|259480406|tpe|CBF71507.1| TPA: ThiJ/PfpI family protein (AFU_orthologue; AFUA_3G01210)
           [Aspergillus nidulans FGSC A4]
          Length = 933

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 11/154 (7%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SL+ DD+   D+  +RRG+P  H  +     I + N LL  A + + +    +  +
Sbjct: 405 LHNASLMLDDIE--DHSPLRRGRPATHTIFGAEQTINSANYLLIDAMQKVRALDDPVCLD 462

Query: 142 IRSQLM--LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           I  + M  L +  +  L     GQ          E +   + ++KT  L        A +
Sbjct: 463 IYLEEMHNLFVGQSFDLYWTRQGQCP-------SEDEYLAMVRLKTSGLFRLLTRLMAQI 515

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           A   +    RL    ++LG  FQ+ DD  +   +
Sbjct: 516 APVQRGLDRRLSNLSDSLGEFFQIRDDYKNLSSE 549


>gi|227495526|ref|ZP_03925842.1| geranylgeranyl pyrophosphate synthase [Actinomyces coleocanis DSM
           15436]
 gi|226831073|gb|EEH63456.1| geranylgeranyl pyrophosphate synthase [Actinomyces coleocanis DSM
           15436]
          Length = 361

 Score = 89.5 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 26/211 (12%)

Query: 37  DRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRV----GAAIECIHCYSLIHDDL 92
            R  S +   L  GK +R+  V   A L      T+  +    G A+E     +L+HDDL
Sbjct: 43  QRFSSLVNSYLGEGKTLRALGVAVGAFLAGSKDFTSSPLIRDLGVAMEFYQASALVHDDL 102

Query: 93  PSMDNGYIRRGKPTVHIQYDE--------VTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
             +D+  +RR   T+ +   +          A++ G+ LL+      +    +    +R 
Sbjct: 103 --IDDVDLRRSHATIQVAARQFLPADAADAAAVLVGDYLLSLNHAATNIALAEASAPLRD 160

Query: 145 QLMLSLTHNIGLQGMLG-GQMLDIQDEFIDETQ-------VFMIQKMKTGAL-MCFACES 195
           Q+     +  G+   +  GQ LDI  E             V  +  +K+G   +      
Sbjct: 161 QI---HAYMAGITAEVAWGQYLDILTETHSLEDTAGLRAHVLDVITVKSGYYSVMRPLVL 217

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           GAI    S      L   G   GI FQ+ DD
Sbjct: 218 GAISEGGSAELIAALETAGTAWGIAFQMRDD 248


>gi|190348241|gb|EDK40664.2| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 329

 Score = 89.5 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 14/176 (7%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           NH T   +   I   H  SL+ DD+   D    RRG P  H +Y   + +  GN +   A
Sbjct: 53  NHDTIATISEVITVFHNSSLLIDDIE--DGSEFRRGLPAAHTKYGVASTLNCGNLMYFVA 110

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML---GGQMLDIQDEF-------IDETQV 177
            +       Q   +     +     NI ++ +L    GQ LDI               + 
Sbjct: 111 LQTAQQKLPQYHPSDNKNDIALSISNILVEELLNLHHGQGLDIHWRDHLKTTKLPSIEEY 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG L   A +     +  +  ++  +       GI+FQ+ DDL++  +D
Sbjct: 171 MEMIMNKTGGLFRLAVKLLGAFS--TPQDEPTVLAIANLFGIVFQIRDDLMNLVDD 224


>gi|238603525|ref|XP_002395972.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553]
 gi|215467625|gb|EEB96902.1| hypothetical protein MPER_03878 [Moniliophthora perniciosa FA553]
          Length = 232

 Score = 89.5 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
            L + +R+    GGK  RS++V  C S    +      + AAIE +H  SL+ DD+   D
Sbjct: 138 HLFAPVRHITERGGKSWRSYIVLACLSALGKDPEPFKPLLAAIELLHTGSLVIDDIQ--D 195

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               RRG   VH  +   TAI AG      +
Sbjct: 196 ESPTRRGVTAVHHVWGVPTAINAGTAAYLRS 226


>gi|119495313|ref|XP_001264444.1| geranylgeranyl diphosphate synthase [Neosartorya fischeri NRRL 181]
 gi|119412606|gb|EAW22547.1| geranylgeranyl diphosphate synthase [Neosartorya fischeri NRRL 181]
          Length = 389

 Score = 89.5 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 74/206 (35%), Gaps = 16/206 (7%)

Query: 28  ASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYS 86
                 ++   L+    Y     GK IR  L+T       V   +   +   +  +H  S
Sbjct: 68  DGKWSQEYEKILMGPYDYMQQHPGKDIRRQLITAFNVWLQVPPESLSIITKVVGMLHTAS 127

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+   DN  +RRG P  H  +     I + N +   A + +         +I  Q 
Sbjct: 128 LLVDDVE--DNSILRRGIPVAHNIFGTAQTINSANYVYFLALQEVQKLNNPTAIDIFVQE 185

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           +L+L    G+        L  +D      E     +   KTG L   A +     +  + 
Sbjct: 186 LLNLHRGQGM-------DLFWRDTLTCPTEEDYLDMVGNKTGGLFRLAIKLMQAES-TTG 237

Query: 205 NEKERLRCFGENLGIIFQLADDLLDC 230
            +   L      +G+ FQ+ DD L+ 
Sbjct: 238 IDCVSLVNV---MGLTFQICDDYLNL 260


>gi|68489506|ref|XP_711426.1| hypothetical protein CaO19.6674 [Candida albicans SC5314]
 gi|46432727|gb|EAK92197.1| hypothetical protein CaO19.6674 [Candida albicans SC5314]
 gi|238882748|gb|EEQ46386.1| hypothetical protein CAWG_04735 [Candida albicans WO-1]
          Length = 332

 Score = 89.5 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 21/191 (10%)

Query: 53  IRSFLVTECASLFNV--NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           +R+  +     LF    +     R+   I   H  SL+ DD+   D+   RRG P  H++
Sbjct: 40  VRTRFLHAFNDLFYKISDESLLARISEIISVFHNSSLLIDDIE--DDSKYRRGVPVAHVK 97

Query: 111 YDEVTAIIAGNGLLTYAF---EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           Y   T I  GN +   A    + +S P   ++   +S  +L       L  +  GQ LDI
Sbjct: 98  YGIPTTINCGNLMYFVALQQAQQLSGPHGSMEVKFKSSQILID----ELLNLHRGQGLDI 153

Query: 168 QDEFI--------DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                        D  +   + K KTG L   A +  ++ +   +N++  L      +GI
Sbjct: 154 YWRDYLKKLEKLPDVEEYLEMIKDKTGGLFRLAIKLLSLYSDVKENDQ--LISLANLMGI 211

Query: 220 IFQLADDLLDC 230
           ++Q+ DD L+ 
Sbjct: 212 LYQVRDDYLNL 222


>gi|322491828|emb|CBZ27101.1| putative farnesyl pyrophosphate synthase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 362

 Score = 89.5 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 96/265 (36%), Gaps = 37/265 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASL 64
           + ++   K  + + + LL       +   + +  L S +    LGGK  R   V + A  
Sbjct: 2   AHMERFQKVYEEVQEFLLSDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEA 61

Query: 65  FNVNH-------LTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
              +           L         IE +  + L+ DD+  MD+   RRGKP  ++    
Sbjct: 62  MAKDAQMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDI--MDHSKTRRGKPCWYLHPGV 119

Query: 114 VT--AIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIG----LQGMLGGQM 164
            T  AI  G  LL +A ++     + +  L + +R    + LT  IG    +  M+    
Sbjct: 120 TTQVAINDGLILLAWATQMALHYFADRPFLAEVLRIFHDVDLTTTIGQLYDVTSMVDSAK 179

Query: 165 LDIQDEFIDETQV--------FMIQKMKTG-ALMCFACESGAIMAHASQN-EKERLRCFG 214
           LD      + T            I   KT           G +++   +  +K       
Sbjct: 180 LDANVAHANTTDYVEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTMEKVDKGATHKVA 239

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
             +G  FQ+ DD++DC    E L K
Sbjct: 240 MVMGEYFQVQDDVMDCFTPPEKLGK 264


>gi|18478919|gb|AAL73357.1|AF386102_1 farnesyl diphosphate synthase precursor [Trypanosoma cruzi]
          Length = 425

 Score = 89.5 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 86/257 (33%), Gaps = 38/257 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------N 66
             +   L D L Q+   +       L   +    LGGK  R   V   A  F        
Sbjct: 75  DEVQAFLLDQL-QSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDE 133

Query: 67  VNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT--AIIAG 120
                 L         IE +  + L+ DD+  MD   +RRGKP  +      T  AI  G
Sbjct: 134 ATKERILHDACVGGWMIEFLQAHYLVEDDI--MDGSVMRRGKPCWYRFPGVTTQCAINDG 191

Query: 121 NGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQG----MLG--------GQM 164
             L ++  +I++    + +  LKD +     +     +G       M           Q 
Sbjct: 192 IILKSW-TQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQP 250

Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERL-RCFGENLGIIFQ 222
           +              I K KT           G +++ A+ + +  L       +G  FQ
Sbjct: 251 MTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLLVSEAAASVEMNLVERVAHLIGEYFQ 310

Query: 223 LADDLLDCE---EDLPK 236
           + DD++DC    E L K
Sbjct: 311 VQDDVMDCFTPPEQLGK 327


>gi|157869471|ref|XP_001683287.1| farnesyl pyrophosphate synthase [Leishmania major strain Friedlin]
 gi|68224171|emb|CAJ04700.1| farnesyl pyrophosphate synthase [Leishmania major strain Friedlin]
          Length = 362

 Score = 89.1 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 97/265 (36%), Gaps = 37/265 (13%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKIRSFLVTECASL 64
           + ++   K  + + + LL       +   + +  L S +    LGGK  R   V + A  
Sbjct: 2   AHMERFQKVYEEVQEFLLGDAEKRFEMDVHRKGYLKSMMDTTCLGGKYNRGLCVVDVAEA 61

Query: 65  FNVNH-------LTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
              +           L         IE +  + L+ DD+  MD+   RRGKP  ++    
Sbjct: 62  MAKDTQMDAAAMERVLHDACVCGWMIEMLQAHFLVEDDI--MDHSKTRRGKPCWYLHPGV 119

Query: 114 --VTAIIAGNGLLTYAFEIIS---SPKTQLKDNIRSQLMLSLTHNIG----LQGMLGGQM 164
               AI  G  LL +A ++     + +  L + +R    + LT  IG    +  M+    
Sbjct: 120 TAQVAINDGLILLAWATQMALHYFADRPFLAEVLRVFHDVDLTTTIGQLYDVTSMVDSAK 179

Query: 165 LDIQDEFIDETQV--------FMIQKMKTG-ALMCFACESGAIMAHASQN-EKERLRCFG 214
           LD +    + T            I   KT           G +++   +  +K+      
Sbjct: 180 LDAKVAHANTTDYVEYTPFNHRRIVVYKTAYYTYWLPLVMGLLVSGTLEKVDKKATHKVA 239

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
             +G  FQ+ DD++DC    E L K
Sbjct: 240 MVMGEYFQVQDDVMDCFTPPEKLGK 264


>gi|1524295|emb|CAA65645.1| farnesyl pyrophosphate synthetase [Neurospora crassa]
          Length = 347

 Score = 89.1 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 91/241 (37%), Gaps = 26/241 (10%)

Query: 13  SKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
            K  +++   L++ LL+ A    +  Q       ++    LGGK  R   V + AS+   
Sbjct: 7   LKEFESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNTLGGKCNRGMSVPDSASILLG 66

Query: 68  NHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LT      A  +G   E +  + L+ DD+  MD+   RRGKP  + Q       I   
Sbjct: 67  RPLTEEEYFQAATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYRQEGVGMVAINDA 124

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--------IQDEFID 173
            +L  A  I +  K   + + R    L L H +  Q    GQ+ D        +  +   
Sbjct: 125 FMLESA--IYTRLKKYFRSHPRYVDFLELFHEVTFQTE-MGQLCDLLTAPEDKVDLDNFS 181

Query: 174 ETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +   I   KT     +   + A+  +  A+    ++       LG  FQ+ DD LD  
Sbjct: 182 MDKYTFIVIYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLDNF 241

Query: 232 E 232
            
Sbjct: 242 G 242


>gi|71409298|ref|XP_807002.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi strain CL
           Brener]
 gi|70870903|gb|EAN85151.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
          Length = 425

 Score = 89.1 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 86/257 (33%), Gaps = 38/257 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------N 66
             +   L D L Q+   +       L   +    LGGK  R   V   A  F        
Sbjct: 75  DEVQAFLLDQL-QSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDE 133

Query: 67  VNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT--AIIAG 120
                 L         IE +  + L+ DD+  MD   +RRGKP  +      T  AI  G
Sbjct: 134 ATKERILHDACVGGWMIEFLQAHYLVEDDI--MDGSVMRRGKPCWYRFPGVTTQCAINDG 191

Query: 121 NGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQG----MLG--------GQM 164
             L ++  +I++    + +  LKD +     +     IG       M           Q 
Sbjct: 192 IILKSW-TQIMAWHYFADRPFLKDLLCLFQKVDYATAIGQMYDVTSMCDSNKLDPEVAQP 250

Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERL-RCFGENLGIIFQ 222
           +              I K KT           G +++ A+ + +  L       +G  FQ
Sbjct: 251 MTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLLVSEAAASVEMNLVERVAHLIGEYFQ 310

Query: 223 LADDLLDCE---EDLPK 236
           + DD++DC    E L K
Sbjct: 311 VQDDVMDCFTPPEQLGK 327


>gi|330971968|gb|EGH72034.1| trans-hexaprenyltranstransferase [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 190

 Score = 89.1 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +LS    I  +G +  Q+  I+D    E     + + KT  L   +  S A + +A Q +
Sbjct: 2   ILSKATRIIAEGEVL-QLSKIRDASTTEETYMEVIRGKTAMLFEASTHSAAALCNAPQEQ 60

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLP 235
            E LR FG++LG+ FQL DDLLD   D  
Sbjct: 61  SEALRTFGDHLGVAFQLVDDLLDYRGDAE 89


>gi|119713780|gb|ABL97828.1| crtE geranylgeranyl diphosphate synthase [uncultured marine
           bacterium HF10_49E08]
          Length = 303

 Score = 89.1 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 71/181 (39%), Gaps = 2/181 (1%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G+KIR+ +       + ++    L + A  + +H  SLI      +D+   RRG  T   
Sbjct: 37  GQKIRAKICLAVGKSYGLDEDLLLDIAAFTDLLHNASLI--HDDLIDDDAERRGYATPWK 94

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
           +Y +  A++ G+ L+  +  + +  K    D +     +S      ++G         Q 
Sbjct: 95  KYGKDKALLLGDLLIAKSLTVSAGMKADSVDKLAWASEISNCVTSAVRGAFKELDFVSQT 154

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                +    + + KTG L        AI A  +Q   + +     N+ I +Q+ DD  D
Sbjct: 155 SDDIISNYTQMSRDKTGVLFALPARCVAIAARKNQLCLDSITNIFTNMAIAYQIRDDQAD 214

Query: 230 C 230
            
Sbjct: 215 Y 215


>gi|222629694|gb|EEE61826.1| hypothetical protein OsJ_16466 [Oryza sativa Japonica Group]
          Length = 403

 Score = 89.1 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 87/240 (36%), Gaps = 23/240 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF---- 65
               +  + +  +LL   A +       +  + + Y + GGK  R   V +   L     
Sbjct: 69  DRFVRAYERLKSELLNDRAFNFDFTEETQ--AMMDYNVPGGKLNRGLSVVDSYMLLRQGT 126

Query: 66  ---NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
              + +   A  +G  +E +   +L+ DD+   DN Y RR     +       +    +G
Sbjct: 127 EVDDEDFYLACVLGWCVEWLQASALVLDDI--TDNAYTRRDNLCWYKLPTVGMS-AINDG 183

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ------ 176
           +L     + +  K   K+      ++ L + IGLQ    GQMLD+               
Sbjct: 184 VLLKC-HVQAIIKRYFKEKFYFLDLMELWNEIGLQ-TAMGQMLDLITTHTGAKDLARYRI 241

Query: 177 --VFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                I K KT             ++  A  ++   L+     +G+ FQ+ DD LDC  D
Sbjct: 242 QGYRRIVKYKTSYYSFYLPVACALLLNGARLSDYVELKNVLIEMGVYFQIQDDYLDCFGD 301


>gi|42558474|gb|AAS19931.1| farnesyl diphosphate synthase [Taxus x media]
          Length = 351

 Score = 89.1 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 86/249 (34%), Gaps = 22/249 (8%)

Query: 2   NGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           N      ++    ++ + +  ++L   A          +   + Y + GGK  R   V +
Sbjct: 6   NANFSVDMKSKFLQVYEHLKAEILRDPAFDYTEDARVWVEKMLDYNVPGGKLNRGLSVID 65

Query: 61  CASLFN-------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
              L                 +G  IE +  Y L+ DD+  MD  + RRG+P        
Sbjct: 66  SYRLLKNGKVLSEGEVFLGCVLGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRLPKV 123

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDE 170
              + A +G+L     I    K   +        L L + +  Q    GQ+LD     + 
Sbjct: 124 GL-VAANDGILLRN-HITRILKMHFRTKPYYSDPLDLFNEVEFQTAC-GQLLDLITTHEG 180

Query: 171 FIDET-----QVFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +D +         I + KT             +MA  + +    ++     +G  FQ+ 
Sbjct: 181 AMDLSKYKMPTYLRIVQYKTAYYSFYLPVACALLMAGENLDNFVDVKNILIQMGTYFQVQ 240

Query: 225 DDLLDCEED 233
           DD LDC  D
Sbjct: 241 DDYLDCFGD 249


>gi|322785241|gb|EFZ11944.1| hypothetical protein SINV_01791 [Solenopsis invicta]
          Length = 320

 Score = 89.1 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 74/212 (34%), Gaps = 25/212 (11%)

Query: 43  IRYALLGGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + Y +  GKK R+  +     L          N      +   +E +  + L+ DD+   
Sbjct: 15  LEYNVPKGKKTRALTLVYAYKLLAPSDQLTEENIRAVRILAWCVEVMQAFFLVIDDIQ-- 72

Query: 96  DNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           D   +RRG+P  +   +    AI  G  L    + +I   +   K       +L   H+ 
Sbjct: 73  DGSLLRRGQPCWYRNNNIGLIAINDGIMLENSIYYLI---QKYFKGKDYYVNLLETFHDT 129

Query: 155 GLQGMLGGQMLDIQDEFI---------DETQVFMIQKMKTGAL-MCFACESGAIMAH-AS 203
            L+  L GQ LD+    +            +   I + KT          +    A    
Sbjct: 130 ILK-TLMGQCLDLLSTNLNKKPNLDLFTINRYNSIVEYKTAYYSFILPVTAAMQSAGIKD 188

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
               ++ +     +G +FQ+ DD LDC  D  
Sbjct: 189 PEMYKQAKTILLEMGHLFQVQDDYLDCFGDTE 220


>gi|299115991|emb|CBN75992.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 338

 Score = 89.1 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 34  QHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           + +  ++    Y   + GK +R  L+       ++       +   +  +H  SL+ DD+
Sbjct: 18  EVDQDIMEPFHYINQVPGKDVRGKLIDAFQIWLDIPAERIDAIKEVVGMLHNASLLVDDI 77

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   + I   N +   A E   +              L+L  
Sbjct: 78  E--DNSKLRRGVPVAHSIYGVASTINTANYVYFQALERTHALGNSRALETFVHEQLNLHR 135

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             G   +         +    E +   +   KTG L   A       +   +N    L  
Sbjct: 136 GQGRDIL-----WRDSNRCPTEEEYESMVLDKTGGLFRLAVGLMQAFSQDQRNYTPLLDQ 190

Query: 213 FGENLGIIFQLADDLLDCEE 232
                 + FQ+ DDL++   
Sbjct: 191 LA----LYFQIRDDLINLSS 206


>gi|119499417|ref|XP_001266466.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
 gi|119414630|gb|EAW24569.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
          Length = 714

 Score = 89.1 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 74/203 (36%), Gaps = 9/203 (4%)

Query: 33  TQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
           T     LL+   Y + L  K +R   V        +   T  ++ +  + +H  SL+ DD
Sbjct: 414 TDMYQHLLAPAEYISSLPSKGVREAFVDALNVWLMLPDRTVTQLKSIAQTLHNASLMLDD 473

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +   D+  +RRG+P  H  +     I + N LL  A + +         +I  + M  L 
Sbjct: 474 IE--DSSPLRRGRPATHTVFVVGQTINSANFLLIQAADQVRRLDDSQCMDIFMEEMRLLF 531

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERL 210
                 G         Q E   E +   + + KTG L        A  A   + +    L
Sbjct: 532 R-----GQSFDLYWTRQGECPSEEEYLAMIRNKTGGLFRLIARLMAQKAPFQNHSLHTSL 586

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
                 LG  FQ+ DD  +  E+
Sbjct: 587 ESMAGQLGEYFQIRDDYKNLTEE 609


>gi|50550901|ref|XP_502923.1| YALI0D17050p [Yarrowia lipolytica]
 gi|49648791|emb|CAG81114.1| YALI0D17050p [Yarrowia lipolytica]
          Length = 327

 Score = 89.1 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 10/186 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           G  IR  L+    ++  V+      +    + +H  SL+ DD+   DN  +RRG P  H 
Sbjct: 32  GHNIREHLIAAFGAVIKVDKSDLETISHITKILHNSSLLVDDVE--DNSMLRRGLPAAHC 89

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +     I + N +   A + +   K+    +I ++ M++L    G+       +     
Sbjct: 90  LFGVPQTINSANYMYFVALQEVLKLKSYDAVSIFTEEMINLHRGQGMDLYWRETLTCP-- 147

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE---RLRCFGENLGIIFQLADD 226
               E +   +   KTG L   A      +A   ++ ++    L    + LG+I+Q+ DD
Sbjct: 148 ---SEDEYLEMVVHKTGGLFRLALRLMLSVASKQEDHEKINFDLTHLTDTLGVIYQILDD 204

Query: 227 LLDCEE 232
            L+ + 
Sbjct: 205 YLNLQS 210


>gi|190345477|gb|EDK37369.2| hypothetical protein PGUG_01467 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 388

 Score = 89.1 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 85/237 (35%), Gaps = 24/237 (10%)

Query: 15  RIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             + + +DLL    S+ M  +       +  Y + GGK  R   V +  ++     +  L
Sbjct: 52  EFEPLREDLLDVIKSYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVVDTYAILKGKKVNEL 111

Query: 74  R---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     +G  +E +  + L+ DD+  MD    RRG P  + +       I  + +L
Sbjct: 112 ESDELKKVTILGWCVEMLQAFFLVADDI--MDKAEKRRGHPCWYKKDGVGLIAINDSFVL 169

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-------IDETQV 177
             A  ++   K   K       +L L H+I  +  L GQ LD+  E            + 
Sbjct: 170 EGAIYVV--LKKYFKKEPYYVELLELFHDITFKTEL-GQFLDLIVEAEHQKLDQFSMDKH 226

Query: 178 FMIQKMKTGAL-MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KT              +A   S  + +++      LG+ FQ  DD LD   
Sbjct: 227 DFVCIYKTAYYSFLLPVALAMYVAGIDSDEDMKQVHDVLIPLGLYFQNQDDFLDVYA 283


>gi|53734594|gb|AAH83212.1| Ggps1 protein [Danio rerio]
          Length = 284

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 15/150 (10%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E +H  SL+ DD+   D+  +RRG P  H  Y   + I + N +     E +   +    
Sbjct: 30  EMLHNASLLIDDIE--DSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLMLEHPEA 87

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGA 197
             + ++ +L L    GL        +  +D +    E +   +   KTG L   A     
Sbjct: 88  VRVFTRQLLELHRGQGL-------DIHWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQ 140

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDL 227
           + +   ++ K  L      LG+ FQ+ DD 
Sbjct: 141 LFSDWKRDLKPLLDT----LGLYFQIRDDY 166


>gi|194015360|ref|ZP_03053976.1| quorum-sensing protein [Bacillus pumilus ATCC 7061]
 gi|194012764|gb|EDW22330.1| quorum-sensing protein [Bacillus pumilus ATCC 7061]
          Length = 307

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 57  LVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L  +    F      A+ ++ A IE +   + I DD+   D            ++     
Sbjct: 46  LAYKHYEAFGGQDKQAITQLAAGIELLILSADILDDIEDQDKDSYP------WMKRQSGI 99

Query: 116 AIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
           AI A N L T +FE+ S     T+L +N+ S  + S+           GQ +D+  E  +
Sbjct: 100 AINAANVLFTLSFEVFSMLDHATELLNNVYSYSIQSM----------QGQHMDMTLEPKN 149

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           E     I K K G+L    C  G I+A  S    + +  +   LG+  QL +D L
Sbjct: 150 EQDCLDIMKSKAGSLFVLPCVLGVILATGSFE--KNVEEYAYYLGMAEQLENDYL 202


>gi|255716258|ref|XP_002554410.1| KLTH0F04642p [Lachancea thermotolerans]
 gi|238935793|emb|CAR23973.1| KLTH0F04642p [Lachancea thermotolerans]
          Length = 351

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 89/243 (36%), Gaps = 29/243 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLFNVNHL------ 70
            ++D+L      +  T    +    ++ Y   GGK  R   V +  ++            
Sbjct: 16  KLVDELKSILTGYGMTADAVQWYENSLNYNTPGGKLNRGLSVVDSYAILKGKKSYEELSE 75

Query: 71  ----TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                   +G  IE +  Y L+ DD+  MD    RRG+P  +   +     I    +L  
Sbjct: 76  EEYFKLATLGWCIELLQAYFLVADDM--MDKSITRRGQPCWYRVEEVGEIAINDAFMLEG 133

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF-------- 178
           A   +   K   K +     +L L H++  Q  L GQ+LD+     D   +         
Sbjct: 134 AIYCL--LKNHFKQDSYYVELLELFHDVTFQTEL-GQLLDLITAPEDNVDLDKFSLDRHS 190

Query: 179 MIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE---D 233
            I + KT     +   + A+ A       + ++ +     LG  FQ+ DD LDC     D
Sbjct: 191 FIVRFKTAYYSFYLPVALAMHAAGISDARDLKQAQDVLIPLGEYFQIQDDYLDCFGKPED 250

Query: 234 LPK 236
           + K
Sbjct: 251 IGK 253


>gi|320034476|gb|EFW16420.1| geranylgeranyl diphosphate synthase [Coccidioides posadasii str.
           Silveira]
          Length = 404

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 25/212 (11%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK IR  L+        V   +   +   +  +H  SL+ 
Sbjct: 85  WSVEKERILLGPYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLA 144

Query: 90  ---------DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
                    DD+   D+  +RRG P  H  +     I + N +   A + I   +     
Sbjct: 145 NSPVLICSVDDVE--DSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAI 202

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            I +  +L+L    G+        L  +D      E     +   KTG L   A +    
Sbjct: 203 GIFTTELLNLHRGQGM-------DLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQA 255

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +  S +    +      +G+IFQ+ DD L+ 
Sbjct: 256 ESEVSVDCIPLV----NLMGLIFQICDDYLNL 283


>gi|303318701|ref|XP_003069350.1| geranylgeranyl pyrophosphate synthetase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240109036|gb|EER27205.1| geranylgeranyl pyrophosphate synthetase, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 404

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 25/212 (11%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK IR  L+        V   +   +   +  +H  SL+ 
Sbjct: 85  WSVEKERILLGPYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLA 144

Query: 90  ---------DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
                    DD+   D+  +RRG P  H  +     I + N +   A + I   +     
Sbjct: 145 NSAVLICSVDDVE--DSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAI 202

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            I +  +L+L    G+        L  +D      E     +   KTG L   A +    
Sbjct: 203 GIFTTELLNLHRGQGM-------DLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQA 255

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +  S +    +      +G+IFQ+ DD L+ 
Sbjct: 256 ESEVSVDCIPLV----NLMGLIFQICDDYLNL 283


>gi|85103549|ref|XP_961541.1| farnesyl pyrophosphate synthetase [Neurospora crassa OR74A]
 gi|67476924|sp|Q92250|FPPS_NEUCR RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|18376241|emb|CAD21355.1| farnesyl-pyrophosphate synthetase [Neurospora crassa]
 gi|28923088|gb|EAA32305.1| farnesyl pyrophosphate synthetase [Neurospora crassa OR74A]
 gi|206597129|dbj|BAG71669.1| farnesyl diohosphate synthase [Neurospora crassa]
          Length = 347

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 90/241 (37%), Gaps = 26/241 (10%)

Query: 13  SKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
            K  +++   L++ LL+ A    +  Q       ++    LGGK  R   V + AS+   
Sbjct: 7   LKEFESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNTLGGKCNRGMSVPDSASILLG 66

Query: 68  NHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LT      A  +G   E +  + L+ DD+  MD+   RRGKP  + Q       I   
Sbjct: 67  RPLTEEEYFQAATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYRQEGVGMVAINDA 124

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--------IQDEFID 173
            +L  A   +   K   + + R    L L H +  Q    GQ+ D        +  +   
Sbjct: 125 FMLESAIYTL--LKKYFRSHPRYVDFLELFHEVTFQTE-MGQLCDLLTAPEDKVDLDNFS 181

Query: 174 ETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +   I   KT     +   + A+  +  A+    ++       LG  FQ+ DD LD  
Sbjct: 182 MDKYTFIVIYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLDNF 241

Query: 232 E 232
            
Sbjct: 242 G 242


>gi|169613953|ref|XP_001800393.1| hypothetical protein SNOG_10111 [Phaeosphaeria nodorum SN15]
 gi|160707244|gb|EAT82446.2| hypothetical protein SNOG_10111 [Phaeosphaeria nodorum SN15]
          Length = 347

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 76/215 (35%), Gaps = 19/215 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTA-LRVGA 77
           +DL+    +    +    LL    Y L G  GK IRS  +        V           
Sbjct: 109 EDLIYGNGATWTEEKERILLGPYDY-LYGHPGKDIRSQCIAAFNLWLKVPPERIGSHNAC 167

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +  +H  SL+ DD+   D+  +RRG P  H  +     I   N +   A + +      
Sbjct: 168 QLGWLHTASLLVDDVE--DSSLLRRGIPVAHSIFGTPQTINTANYVYFKALQDLLRMNNP 225

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACES 195
               I ++ +L+L    G+        L  +D      E     +   KTG L   A + 
Sbjct: 226 KLIEIFTEELLNLHRGQGM-------DLYWRDSLTCPSEADYLEMVGNKTGGLFRLAIKL 278

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
               +    +    +      +G++FQ+ DD L+ 
Sbjct: 279 MQAESAVDVDCAPLVST----IGLLFQILDDHLNL 309


>gi|224284882|gb|ACN40171.1| unknown [Picea sitchensis]
          Length = 347

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 86/247 (34%), Gaps = 26/247 (10%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            + +K +E    +      +L   A          +   + Y + GGK  R   V +   
Sbjct: 8   DVKTKFEEIYLELKA---QILNDPAFDYTEDARQWVEKMLDYTVPGGKLNRGMSVIDSYR 64

Query: 64  LFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-T 115
           L       +         +G  IE +  Y LI DD+  MD+ + RRG+P           
Sbjct: 65  LLKAGKEISEDEVFLGCVLGWCIEWLQAYFLILDDI--MDSSHTRRGQPCWFRLPKVGLI 122

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD---IQDEFI 172
           A+  G  L  +   I+   K   +       +L L + +       GQ+LD     +   
Sbjct: 123 AVNDGILLRNHICRIL---KKHFRTKPYYVDLLDLFNEVE-FQTASGQLLDLITTHEGAT 178

Query: 173 DETQVFM-----IQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           D ++  M     I + KT             +MA    +    ++     +G  FQ+ DD
Sbjct: 179 DLSKYKMPTYVRIVQYKTAYYSFYLPVACALVMAGEILDNHVDVKNILVEMGTYFQVQDD 238

Query: 227 LLDCEED 233
            LDC  D
Sbjct: 239 YLDCFGD 245


>gi|124358874|dbj|BAF45924.1| fusicoccadiene synthase [Phomopsis amygdali]
 gi|124358876|dbj|BAF45925.1| fusicoccadiene synthase [Phomopsis amygdali]
          Length = 719

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 73/195 (37%), Gaps = 21/195 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K +R   +        V  +   ++  A+  +H  SL+ DD    DN  +RRGKP+ H  
Sbjct: 435 KGVRDQFIDALNDWLRVPDVKVGKIKDAVRVLHNSSLLLDD--FQDNSPLRRGKPSTHNI 492

Query: 111 YDEVTAIIAGNGLLTYAFEIIS--SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           +     +      +  A   I   S    +++ + S ++L     + L     G +    
Sbjct: 493 FGSAQTVNTATYSIIKAIGQIMEFSAGESVQEVMNSIMILFQGQAMDLFWTYNGHVP--- 549

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER------LRCFGENLGIIFQ 222
                E + + +   KTG L   A     ++ +A+ NE  R      L      LG  FQ
Sbjct: 550 ----SEEEYYRMIDQKTGQLFSIATS---LLLNAADNEIPRTKIQSCLHRLTRLLGRCFQ 602

Query: 223 LADDLLD-CEEDLPK 236
           + DD  +    D  K
Sbjct: 603 IRDDYQNLVSADYTK 617


>gi|195436322|ref|XP_002066117.1| GK22106 [Drosophila willistoni]
 gi|194162202|gb|EDW77103.1| GK22106 [Drosophila willistoni]
          Length = 411

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 79/228 (34%), Gaps = 17/228 (7%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-LFNVNHLT----- 71
            ++ DL   T ++      +     ++Y +  GKK R  L       L   + +T     
Sbjct: 85  DVVRDLTGVTRAYNCNDAANWFARVLQYNVPRGKKNRGILCVLTYKNLVPADQITPESLK 144

Query: 72  -ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + ++ DD+  MDN   RRG+   H       TAI     +    F 
Sbjct: 145 LAHYLGWCVEMLQSFFIMSDDV--MDNSTTRRGQLCWHRVEGVGLTAINDTLMVENAMFA 202

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-IDETQVFMIQKMKTGAL 188
           ++    + L   +    +      I   G    Q+   +            I   KT   
Sbjct: 203 VLKKHFSHLDCYVDLMELFHEISFITTCGQTLDQINSHRKVSEFTMDNYKSIVYNKTAYY 262

Query: 189 MCFACESGAI-MAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
             +   + A+ +A     + E  R        +G  FQ+ DD LDC  
Sbjct: 263 TFYLPFALAMHLAGF--KDAEAFRQSKTILLEMGHFFQVQDDFLDCFG 308


>gi|119181731|ref|XP_001242054.1| hypothetical protein CIMG_05950 [Coccidioides immitis RS]
          Length = 404

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 25/212 (11%)

Query: 31  MQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK IR  L+        V   +   +   +  +H  SL+ 
Sbjct: 85  WSAEKERILLGPYEYMVHQPGKDIRRQLIAAFNRWLQVPEESLAVITKVVLMLHTASLLA 144

Query: 90  ---------DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
                    DD+   D+  +RRG P  H  +     I + N +   A + I   +     
Sbjct: 145 NSPVLMCSVDDVE--DSSVLRRGVPVAHNIFGTAQTINSANYIYFLALDEIQKLRNADAI 202

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            I +  +L+L    G+        L  +D      E     +   KTG L   A +    
Sbjct: 203 GIFTTELLNLHRGQGM-------DLFWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQA 255

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
            +  S +    +      +G+IFQ+ DD L+ 
Sbjct: 256 ESEVSVDCIPLV----NLMGLIFQICDDYLNL 283


>gi|322703753|gb|EFY95357.1| Farnesyl pyrophosphate synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 347

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 81/228 (35%), Gaps = 17/228 (7%)

Query: 20  LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLV------TECASLFNVNHLT 71
           L++ +L+ A    +     D L + +    LGGK  R   V         ++L    +  
Sbjct: 17  LEEAILEHARKYKLPQGELDWLKANLETNPLGGKCNRGMSVPDSVSLLLGSALNEEQYFQ 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEI 130
           A  +G   E +  + L+ DD+  MD    RRGKP  + Q      AI     L +  + +
Sbjct: 77  AATLGWMTELLQAFFLVSDDM--MDGSITRRGKPCWYRQEGVGMIAINDAFILESSIYVL 134

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKTG 186
           +          I    +   T      G L   +   +D    +    T+   I   KT 
Sbjct: 135 LRKYFRSHPAYIDIVELFHETTFQTEMGQLCDLLTAPEDKVNLDNFSMTKYQFIVIYKTA 194

Query: 187 ALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               +   + A+  +  A+    ++       LG  FQ+ DD LD   
Sbjct: 195 YYSFYLPVALALHQLNLATPKNLKQAEDILIPLGEYFQIQDDYLDNFG 242


>gi|324513413|gb|ADY45511.1| Geranylgeranyl pyrophosphate synthase [Ascaris suum]
          Length = 307

 Score = 88.7 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 12/193 (6%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L++   Y + + GK +RS L T       +N      +   +E +H  SL+ DD+   D+
Sbjct: 8   LMAPFVYISKVPGKHVRSRLATAFNLWLKINDNPLELIMCTVEMLHNASLLIDDIE--DS 65

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y     I  GN +   A              I  + ML L    G +
Sbjct: 66  SILRRGIPVAHSVYGVARTINTGNYVYFVALSKCLQLAKPKAIEIFCEKMLELHRGQG-K 124

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            +     +        E+Q   +   KTG L         + +    N    +       
Sbjct: 125 ELYWRDTMQCP----TESQYEEMVIEKTGGLFSLTVRLMELFSVHQYNFTPLINNLALYC 180

Query: 218 GIIFQLADDLLDC 230
               Q+ DD ++ 
Sbjct: 181 ----QIRDDYINL 189


>gi|319745656|gb|EFV97955.1| trans-hexaprenyltranstransferase [Streptococcus agalactiae ATCC
           13813]
          Length = 226

 Score = 88.3 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 7/132 (5%)

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           T+  ++ +  A+  G+ L T  F++I               + + +    L G L  QM 
Sbjct: 2   TIQSKFGKDIAVYTGDLLFTVFFDLILESMADTP----FMRINAKSMRKILMGEL-DQMH 56

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
              ++             KT  L   A + GA    A +         G N+G+ FQ+ D
Sbjct: 57  LRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGAEKEVVRLAGHIGFNIGMTFQILD 116

Query: 226 DLLDCEEDLPKK 237
           D+LD   D  KK
Sbjct: 117 DILDYTAD--KK 126


>gi|151415019|gb|ABS11699.1| farnesyl diphosphate synthase [Matricaria chamomilla var. recutita]
          Length = 343

 Score = 88.3 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 86/244 (35%), Gaps = 23/244 (9%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
            L SK     K  DT+  +L+   A          +   + Y + GGK  R   V +   
Sbjct: 5   DLKSKF---LKVYDTLKSELINDPAFEFDDDSRQWVEKMLDYNVPGGKLNRGLSVVDSYQ 61

Query: 64  LFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
           L     LT      +  +G  IE +  Y L+  D+  MD  + RRG+P           I
Sbjct: 62  LLKGGELTDDEIFLSSALGWCIEWLQAYFLVLGDI--MDESHTRRGQPCWFRLPKVGM-I 118

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
            A +G+L     +    K   +       ++ L + +       GQM+D+    + E  +
Sbjct: 119 AANDGILLRN-HVPRILKNHFRGKPYYVDLVDLFNEVE-FQTASGQMIDLITTLVGEKDL 176

Query: 178 --------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                     I + KT             +M     ++   ++     +G  FQ+ DD L
Sbjct: 177 SKYSLSVHRRIVQYKTAYYSFYLPVAXALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYL 236

Query: 229 DCEE 232
           DC  
Sbjct: 237 DCFG 240


>gi|322711435|gb|EFZ03008.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae ARSEF
           23]
          Length = 327

 Score = 88.3 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 17/203 (8%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            D++L+A    L    GK IR  L         V       +   I+ +H  SL+ DD+ 
Sbjct: 37  EDKVLTAPLDYLRESPGKDIRGGLTNAFNQFLCVPEEKVTVIKRIIDLLHNASLLIDDIQ 96

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
             D+  +RRG P  H  +     I + N     A + +          I ++ +++L   
Sbjct: 97  --DSSKLRRGVPVAHSIFGIAQTINSANLAYFMAQKELDQLTNPRAYAIFTEELVNLHRG 154

Query: 154 IGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G++       L  +D      E +   + + KTG L   A       + + ++    + 
Sbjct: 155 QGME-------LHWRDSLHCPTEQEYMRMIQNKTGGLFRLAIRLMQGESSSKRDFVPLVE 207

Query: 212 CFGENLGIIFQLADDLLDCEEDL 234
                LG +FQ+ DD  + + D+
Sbjct: 208 T----LGALFQIRDDYQNLQSDV 226


>gi|322829693|gb|EFZ32996.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
          Length = 362

 Score = 88.3 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 86/257 (33%), Gaps = 38/257 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------N 66
             +   L D L Q+   +       L   +    LGGK  R   V   A  F        
Sbjct: 12  DEVQAFLLDQL-QSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDE 70

Query: 67  VNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT--AIIAG 120
                 L         IE +  + L+ DD+  MD   +RRGKP  +      T  AI  G
Sbjct: 71  ATKERILHDACVGGWMIEFLQAHYLVEDDI--MDGSVMRRGKPCWYRFPGVTTQCAINDG 128

Query: 121 NGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQG----MLG--------GQM 164
             L ++  +I++    + +  LKD +     +     IG       M           Q 
Sbjct: 129 IILKSW-TQIMAWHYFADRPFLKDLLCLFQKVDYATAIGQMYDVTSMCDSNKLDPEVAQP 187

Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERL-RCFGENLGIIFQ 222
           +              I K KT           G +++ A+ + +  L       +G  FQ
Sbjct: 188 MTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLLISEAAASVEMNLVERVAHLIGEYFQ 247

Query: 223 LADDLLDCE---EDLPK 236
           + DD++DC    E L K
Sbjct: 248 VQDDVMDCFTPPEQLGK 264


>gi|47225367|emb|CAG11850.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 402

 Score = 88.3 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 76/231 (32%), Gaps = 44/231 (19%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDN 97
           Y + GGK+ R   V                    AL VG  IE +  + L+ DD+  MD 
Sbjct: 72  YNVPGGKRNRGLSVIGSLRELLPPSELTQDLVQRALLVGWCIELLQAFFLVADDI--MDA 129

Query: 98  GYIRRGKPTVHIQYDEVT--------------------AIIAGNGL--LTYAFEIISSPK 135
              RRG+P  + +                         A   G GL  +  +F + SS  
Sbjct: 130 SVTRRGQPCWYKKVTLDPCLKSGIVLGLSVPFYLPCVFAFQDGIGLDAINDSFLLESSIY 189

Query: 136 TQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQDE-------FIDETQVFMIQKMK 184
             L+ + R Q     +L L      Q  LG  +  +               +   I K K
Sbjct: 190 RLLRRHCRGQPYYIHLLELFTETSFQTELGQTLDLMTAPPGQIDLNRFTMDRYKAIVKYK 249

Query: 185 TG-ALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           T          +   +A   S+ E    +     +G  FQ+ DD LDC  D
Sbjct: 250 TAFYSFYLPVAAAMYIAGITSEEEHNNAKHILLEMGEFFQIQDDYLDCYGD 300


>gi|195119624|ref|XP_002004330.1| GI19872 [Drosophila mojavensis]
 gi|193909398|gb|EDW08265.1| GI19872 [Drosophila mojavensis]
          Length = 413

 Score = 88.3 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 71/232 (30%), Gaps = 25/232 (10%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ DL   T               ++Y +  GKK R  L             L   N  
Sbjct: 87  DVVRDLTTYTKGFNCNDAVKWFAQVMQYNVPRGKKNRGILTVLTYKNLVPAEDLTPENIK 146

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+   H        AI     +    + 
Sbjct: 147 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQKCWHRVESVGLIAINDALMIENALYA 204

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
           I+    + L   +    +      I       GQ LD+ +               I   K
Sbjct: 205 ILKQHFSHLDCYVALMELFHEVTYITTC----GQSLDLLNSNKSVSEFTMETYKAIVDNK 260

Query: 185 TG-ALMCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLLDCEE 232
           T              +A     + E  R        +G  FQ+ DD LDC  
Sbjct: 261 TAHYSFYLPFALAMHLAGY--KDAEAFRQSKTILLEMGHFFQVQDDFLDCFG 310


>gi|221056306|ref|XP_002259291.1| Farnesyl pyrophosphate synthase [Plasmodium knowlesi strain H]
 gi|193809362|emb|CAQ40064.1| Farnesyl pyrophosphate synthase, putative [Plasmodium knowlesi
           strain H]
          Length = 375

 Score = 88.3 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 82/256 (32%), Gaps = 41/256 (16%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLF------NVNH 69
           D  L+ L          +H  +    +  Y  LGGK  R  LV             ++  
Sbjct: 25  DAFLNHLKEYALEEEIKEHISKYYKLLFDYNCLGGKYNRGILVILIYEYVKNRDINSIEW 84

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             A  +   IE +    L+ DD+  MD G  RR K   ++  D  T     + LL Y   
Sbjct: 85  EKAACLAWCIEILQASFLVADDI--MDKGEKRRKKYCWYLLKDVETKNAVNDILLLYN-S 141

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---DEFIDE------------ 174
           I    +  L++      +LS   +  L+ ++ GQ LD     D++ D             
Sbjct: 142 IYKLIEIYLRNESCYVDILSTFRDATLKTII-GQHLDTNIFSDKYTDLNKEIDVNNINVP 200

Query: 175 ------------TQVFMIQKMKTGAL-MCFACESGAIMAH--ASQNEKERLRCFGENLGI 219
                            I   KT           G ++          +++      +G 
Sbjct: 201 EQEIININMVNFEVYKNIVIHKTAYYSFFLPIVCGMLLGGIAVDNLIYKKIEGISMLMGE 260

Query: 220 IFQLADDLLDCEEDLP 235
            FQ+ DD LD   D  
Sbjct: 261 YFQVHDDYLDVFADSK 276


>gi|156042580|ref|XP_001587847.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980]
 gi|154695474|gb|EDN95212.1| hypothetical protein SS1G_11088 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 220

 Score = 88.3 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 5/120 (4%)

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A++AG+ LL+ A   ++  +      + + ++ +L    G    L     D ++    E
Sbjct: 1   MAVLAGDFLLSRASVALARLRDAEVTELLATVIANLVE--GEFMQLKNTAQDEKNPVWTE 58

Query: 175 T---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
                      +K+ +L+  +C + A++  +     +    +G+NLG+ FQL DD+LD  
Sbjct: 59  ETISYYLQKTYLKSASLISKSCRAAALLGGSDAVTVDAAYDYGKNLGLAFQLVDDMLDYT 118


>gi|154304670|ref|XP_001552739.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10]
 gi|150853974|gb|EDN29166.1| hypothetical protein BC1G_08074 [Botryotinia fuckeliana B05.10]
          Length = 220

 Score = 88.3 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 8/128 (6%)

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A++AG+ LL+ A   ++  +      + + ++ +L    G    L     D ++    E
Sbjct: 1   MAVLAGDFLLSRASVALARLRDAEVTELLATVIANLVE--GEFMQLKNTAQDEKNPVWTE 58

Query: 175 T---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC- 230
                      +K+ +L+  +C + A++  +     +    +G+NLG+ FQL DD+LD  
Sbjct: 59  ETISYYLQKTYLKSASLISKSCRAAALLGGSDGVTVDAAYDYGKNLGLAFQLVDDMLDYT 118

Query: 231 --EEDLPK 236
             E++L K
Sbjct: 119 ISEKELGK 126


>gi|66815947|ref|XP_641990.1| farnesyl diphosphate synthase [Dictyostelium discoideum AX4]
 gi|74849279|sp|Q9NH03|FPS_DICDI RecName: Full=Farnesyl diphosphate synthase; Short=Dfps; AltName:
           Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Geranyltranstransferase
 gi|7188788|gb|AAF37872.1| farnesyl diphosphate synthase [Dictyostelium discoideum]
 gi|60469988|gb|EAL67969.1| farnesyl diphosphate synthase [Dictyostelium discoideum AX4]
          Length = 382

 Score = 88.3 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 77/238 (32%), Gaps = 29/238 (12%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSF-------LVTECASLFNVNH 69
           + IL +L       M  Q    +   I   + GGK  R         L+ E   L     
Sbjct: 50  NEILKEL---PGMDMPPQTIAWVEKMINVNVSGGKMNRGLTVLHSLQLLVEGRQLSRSEI 106

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ------YDEVTAIIAGN-G 122
             A  +G  +E +  + L+ DD+  MD    RRG+P  + Q         + +I   +  
Sbjct: 107 FLANVLGWCVEWLQAFFLVADDI--MDQSITRRGQPCWYRQANPISNNGTIGSIAINDSF 164

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------QMLDIQDEFIDETQ 176
           +L     I+   K   ++      +L + H    Q  LG       Q             
Sbjct: 165 ILESCIYIL--IKKYFRNEPYYADILDIFHETSYQTELGQLLDLTTQPNRGDFSLFTLNT 222

Query: 177 VFMIQKMKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
              I K KT             +MA  +        +     +G  FQ+ DD LDC  
Sbjct: 223 YRRIVKYKTAYYSFYLPVALAMLMAGITSTPAFSTAKDILLPMGEFFQVQDDFLDCYG 280


>gi|67522270|ref|XP_659196.1| hypothetical protein AN1592.2 [Aspergillus nidulans FGSC A4]
 gi|40745143|gb|EAA64299.1| hypothetical protein AN1592.2 [Aspergillus nidulans FGSC A4]
 gi|259486923|tpe|CBF85177.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 397

 Score = 87.9 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 19/218 (8%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           D +  + + + +  +   +     Y   + GK+IR  L+      + V+  +   +   +
Sbjct: 89  DTIDEKLSMYWKAANETVIREPYDYIAGIPGKEIRRKLLEAFNHWYKVDEQSCQAIATTV 148

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
              H  SL+ DD+   D+  +RRG P  H  +     I + N +   A   +        
Sbjct: 149 GMAHNASLLIDDIQ--DSSKLRRGVPCAHEVFGIAQTINSANYVYFLAQNQL-------- 198

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACES 195
             +RS        N  +  +  GQ +++                +   KTG L       
Sbjct: 199 FRLRSWPQAISVFNEEMVNLHRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLFRMIVR- 257

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              +   S  +   +    + LG+ FQ+ DD  +  E+
Sbjct: 258 ---LLQTSSRQVIDVEQLVDVLGLYFQILDDYKNIREE 292


>gi|330917321|ref|XP_003297764.1| hypothetical protein PTT_08283 [Pyrenophora teres f. teres 0-1]
 gi|311329353|gb|EFQ94125.1| hypothetical protein PTT_08283 [Pyrenophora teres f. teres 0-1]
          Length = 394

 Score = 87.9 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 73/208 (35%), Gaps = 20/208 (9%)

Query: 33  TQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDD 91
            +    + +   Y A   GK+ R+ ++        ++  +   +   +  +H  SL+ DD
Sbjct: 99  PEKEKAIKNPFEYIASQPGKEFRTRVLEAFNEWLQISDESLKVIANVVRTLHTASLLIDD 158

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +   D+  +RRG+P  H  Y     I + N     A + +     Q +  +  +  +   
Sbjct: 159 IQ--DSSVLRRGRPVAHRVYGVAQTINSANYHYFLALQELRKLDNQTEALMIYETEMLRL 216

Query: 152 HNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           H         G  L  +D      E     +   KT  L   A       + +  +    
Sbjct: 217 H------QGQGMELYWRDTSTCPTEDDYLEMVSNKTRGLFRLAIRLMQSRSSSRMDCIPL 270

Query: 210 LRCFGENLGIIFQLADDLL-----DCEE 232
           +    + LG+IFQ+ DD       D  +
Sbjct: 271 V----QLLGLIFQIVDDYKNLSDVDYTQ 294


>gi|309754779|gb|ADO87007.1| E,E-farnesyl diphosphate synthase [Santalum album]
          Length = 342

 Score = 87.9 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 80/228 (35%), Gaps = 23/228 (10%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT-------ALR 74
           +LL   A +        +   + Y + GGK  R   V +   L              A  
Sbjct: 18  ELLRDPAFNFTDASRQWVDRMLDYNVPGGKLNRGLSVIDSYELLKEGKELTDDEIFLASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  IE +  Y L+ DD+  MD  + RRG+P      +    A+  G  L  +   I+  
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRLPEVGLIAVNDGIMLRNHIPRIL-- 133

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT 185
            K   K+      +L L + +       GQM+D+      +  +          I + KT
Sbjct: 134 -KKHFKNKPYYVELLDLFNEVE-FQTTSGQMIDLITTLEGQKDLSKYSMPIHHRIVQYKT 191

Query: 186 GAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                        +M+  + +    +      +G  FQ+ DD LDC  
Sbjct: 192 AYYSFYLPVACALLMSGENLDSHTEVEKILVEMGTYFQVQDDYLDCFG 239


>gi|219669206|ref|YP_002459641.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539466|gb|ACL21205.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 326

 Score = 87.9 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 21/191 (10%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L+     +F  +  T +    A+E     + I DD+   DN  +               A
Sbjct: 55  LLFTIGDVFGDSQETIVHGAVAMELYALAADIFDDIEDQDNDELP------WRTIPAAQA 108

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---ID 173
           I   N +L  +F+ +++    + D    +    +   +G+     GQ  +   E    I 
Sbjct: 109 INTANLILFLSFKALAA----INDQALYRQANDIFQTMGIT-ACHGQNQEFLYEGQDAIT 163

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---- 229
             Q F   + K+GAL    C+  A++A    +    L  FG+NLGII Q+ +DL D    
Sbjct: 164 LAQYFDTARKKSGALTAGTCKLAAVLAGCDTSLILDLEKFGQNLGIISQIKNDLRDLFRV 223

Query: 230 -CEED--LPKK 237
             + D  L KK
Sbjct: 224 EAKSDVRLGKK 234


>gi|89894773|ref|YP_518260.1| hypothetical protein DSY2027 [Desulfitobacterium hafniense Y51]
 gi|89334221|dbj|BAE83816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 326

 Score = 87.9 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 21/191 (10%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L+     +F+ N  T ++V  A+E     + I DD+   DN  +               A
Sbjct: 55  LLFTIGDVFSDNQETIVQVAVAMELYALAADIFDDIEDQDNDELP------WRTIPAAQA 108

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---ID 173
           I   N +L  +F+ +++    + D    +    +   +G+     GQ  +   E    I 
Sbjct: 109 INTANLILFLSFKALAA----INDQALYRQANDIFQTMGIT-ACHGQNQEFLYEGQDAIT 163

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---- 229
             Q F   + K+GAL    C+  A++A    +    L  FG+NLGII Q+ +DL D    
Sbjct: 164 LAQYFDTARKKSGALTAGTCKLAAVLAGCDTSLILDLEKFGQNLGIISQIKNDLRDLFRV 223

Query: 230 -CEED--LPKK 237
             + D  L KK
Sbjct: 224 EAKSDVRLGKK 234


>gi|302686592|ref|XP_003032976.1| farnesyl-diphosphate synthase [Schizophyllum commune H4-8]
 gi|300106670|gb|EFI98073.1| farnesyl-diphosphate synthase [Schizophyllum commune H4-8]
          Length = 347

 Score = 87.9 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 82/244 (33%), Gaps = 30/244 (12%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIR-------YALLGGKKIRSFLVTECA 62
           QE  ++ + +   +  +  +H++ Q       A+        Y   GGK  R   V +  
Sbjct: 4   QELREKFNDVYKLIREELVAHIRAQGMPE--DAVEWYARNLDYNTPGGKLNRGLSVVDST 61

Query: 63  SLFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            +   +      +  A  +G  +E +  + L+ DD+  MD+   RRG+P  +   +    
Sbjct: 62  KILLGDKFTEEHYKQAAILGWCVELLQAFFLVSDDI--MDSSITRRGQPCWYRTPNVGMI 119

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
            I    +L  A   +   K   K       +L L H         GQ++D+     D   
Sbjct: 120 AINDAFMLEAAIYHL--LKVHFKSQAYYVELLELFHET-THQTEMGQLIDLITAPEDHVD 176

Query: 177 VFM--------IQKMKT-GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADD 226
           +          I + KT              +    S    E        LG  FQ+ DD
Sbjct: 177 LNRFSLKKHALIVQYKTSYYSFYLPVALAFHLCGITSPKAFETALEILLPLGEYFQIQDD 236

Query: 227 LLDC 230
            LD 
Sbjct: 237 YLDY 240


>gi|146419671|ref|XP_001485796.1| hypothetical protein PGUG_01467 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 388

 Score = 87.9 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 84/237 (35%), Gaps = 24/237 (10%)

Query: 15  RIDTILDDLL-LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL 73
             + + +DLL +     M  +       +  Y + GGK  R   V +  ++     +  L
Sbjct: 52  EFEPLREDLLDVIKLYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVVDTYAILKGKKVNEL 111

Query: 74  R---------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
                     +G  +E +  + L+ DD+  MD    RRG P  + +       I  + +L
Sbjct: 112 ESDELKKVTILGWCVEMLQAFFLVADDI--MDKAEKRRGHPCWYKKDGVGLIAINDSFVL 169

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-------IDETQV 177
             A  ++   K   K       +L L H+I  +  L GQ LD+  E            + 
Sbjct: 170 EGAIYVV--LKKYFKKEPYYVELLELFHDITFKTEL-GQFLDLIVEAEHQKLDQFSMDKH 226

Query: 178 FMIQKMKTGAL-MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             +   KT              +A   S  + +++      LG+ FQ  DD LD   
Sbjct: 227 DFVCIYKTAYYSFLLPVALAMYVAGIDSDEDMKQVHDVLIPLGLYFQNQDDFLDVYA 283


>gi|312220249|emb|CBY00190.1| similar to farnesyl pyrophosphate synthetase [Leptosphaeria
           maculans]
          Length = 349

 Score = 87.5 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 86/255 (33%), Gaps = 36/255 (14%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLV-----TEC 61
           ++ +    RI   L     Q   ++  Q  D    ++ Y  +GGK  R   V        
Sbjct: 8   AEFESVWPRIVQDLQHHCKQ--YNLPQQSLDWFTKSLNYNTVGGKCNRGMSVVDTTAILT 65

Query: 62  ASLFNVNHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               +               IE +  + L+ DD+  MD+   RRG P  ++         
Sbjct: 66  DKALDPASDDYFGPALLGWLIELLQAFFLVSDDI--MDSSKTRRGSPCWYLVP------Q 117

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIR----SQLMLSLTHNIGLQGMLGGQMLD-------- 166
            G   +  AF + +S    LK + R       +L L H +  Q    GQ+ D        
Sbjct: 118 VGMIAINDAFMLEASIYVLLKKHFRQHKSYLDLLELFHEVTFQTEC-GQLCDLITAPEDN 176

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLA 224
           +  +     +   I   KT     +   + A+  +  A+    +  +     +G  FQ  
Sbjct: 177 VNLDNFSLEKFTFIVIYKTAFYSFYLPVAIALHYVGAATPKNLQTAQEILIPMGEYFQAQ 236

Query: 225 DDLLDCEED---LPK 236
           DD LD   D   L K
Sbjct: 237 DDYLDAFADPDVLGK 251


>gi|228470131|ref|ZP_04055040.1| polyprenyl synthetase [Porphyromonas uenonis 60-3]
 gi|228308269|gb|EEK17124.1| polyprenyl synthetase [Porphyromonas uenonis 60-3]
          Length = 87

 Score = 87.5 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R  L     +   ++    +    A+E  H ++L+HDD+  MDN  +RRGKP+V+ +Y 
Sbjct: 1   MRPVLALLMQAFLRLDAPLVVSPAVALEVFHNFTLLHDDV--MDNSPVRRGKPSVYAKYG 58

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQ 137
              AI++G+ +L  A+++++   + 
Sbjct: 59  LTPAILSGDAMLILAYQMLTEDVSP 83


>gi|169776171|ref|XP_001822552.1| geranyltranstransferase [Aspergillus oryzae RIB40]
 gi|238502861|ref|XP_002382664.1| farnesyl-pyrophosphate synthetase [Aspergillus flavus NRRL3357]
 gi|83771287|dbj|BAE61419.1| unnamed protein product [Aspergillus oryzae]
 gi|220691474|gb|EED47822.1| farnesyl-pyrophosphate synthetase [Aspergillus flavus NRRL3357]
          Length = 346

 Score = 87.5 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 86/253 (33%), Gaps = 31/253 (12%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLL-QTASHMQTQHNDRLLSAIRYALLGGKKIRSF--- 56
           M     +  QE      ++ +D+L     S++          A+   + GGK  R     
Sbjct: 1   MPATDRAAFQEV---FPSLAEDILAYAKESNLPENALQWFEKALNVNVPGGKLNRGLSCP 57

Query: 57  ---LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
              L      L          +G   E +  + L+ DD+  MD+   RRG+P  + Q   
Sbjct: 58  DTGLALLEKPLTEEQFKHLSILGWLTELLQAFFLVSDDI--MDSSITRRGQPCWYRQEG- 114

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLD---- 166
                 G   +  AF + SS    LK + RS    +      +        GQ+ D    
Sbjct: 115 -----VGLIAINDAFLLESSIYVILKKHFRSHPAYADFIDLFHETTWQTELGQLCDLITA 169

Query: 167 IQDE----FIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGII 220
            +D+         +   I   KT     +   + A++    A+ +   +       LG  
Sbjct: 170 PEDKVDLNNFSMEKYMFIVTYKTAYYSFYLPVALALLYLQRATPSNLRQAHDILIPLGQY 229

Query: 221 FQLADDLLDCEED 233
           FQ+ DD LD   D
Sbjct: 230 FQVQDDYLDAYGD 242


>gi|289619215|emb|CBI54483.1| unnamed protein product [Sordaria macrospora]
          Length = 347

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 91/241 (37%), Gaps = 26/241 (10%)

Query: 13  SKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
            K  +++   L++ LL+ A    +  Q       ++    LGGK  R   V + AS+   
Sbjct: 7   LKEFESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNALGGKCNRGMSVPDSASILLG 66

Query: 68  NHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LT      A  +G   E +  + L+ DD+  MD+   RRGKP  ++Q       I   
Sbjct: 67  RPLTEEEYFQAATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYLQEGVGMVAINDA 124

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--------IQDEFID 173
            +L  A   +   K   K + R    L L H +  Q    GQ+ D        +  +   
Sbjct: 125 FMLESAIYTL--LKKYFKSHPRYVDFLELFHEVTFQTE-MGQLCDLLTAPEDKVDLDNFS 181

Query: 174 ETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
             +   I   KT     +   + A+  +  A+    ++       LG  FQ+ DD LD  
Sbjct: 182 MDKYTFIVIYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLDNF 241

Query: 232 E 232
            
Sbjct: 242 G 242


>gi|238498722|ref|XP_002380596.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
 gi|220693870|gb|EED50215.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
          Length = 271

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 7/157 (4%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           +  E +H  SL+ DD+   D+  +RRG+P  H  + +   I + N LL  A + +     
Sbjct: 17  SIAETLHNASLLLDDIE--DSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMDQVRQLDN 74

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
           Q   ++  + M +L       G         Q E   + +   +   KTG L        
Sbjct: 75  QRCMDVFVEEMRNLF-----IGQSFDLYWTRQGECPSQDEYLEMISQKTGGLFRLLTRLM 129

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              A    N    L      LG  FQ+ DD  +  ED
Sbjct: 130 TEKASTQHNSTITLDSLVSLLGQYFQIRDDYKNLTED 166


>gi|17508563|ref|NP_493027.1| hypothetical protein R06C1.2 [Caenorhabditis elegans]
 gi|5824560|emb|CAB03221.2| C. elegans protein R06C1.2, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 352

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 29/248 (11%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-------------ALLGGKKIRSFL 57
            + K ++T L ++  +    +  +        + Y              ++GGK  R+ L
Sbjct: 3   ASRKLVETALGEVKKKFVRVVAAKLP---ADGMEYDLVQYRCRNLFDNTVIGGKYSRASL 59

Query: 58  VTECASLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
             +                       A +E I  + LI DD+  MDN   RRGKP    +
Sbjct: 60  CVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI--MDNSETRRGKPCWFRR 117

Query: 111 YDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 AI     + ++  +I+        +  R       +    L G         Q 
Sbjct: 118 EGVGMSAINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTLIGQFLDTSSVNQI 177

Query: 170 EFIDETQVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 +  ++ + KT     F   +   I++         ++     +G +FQ  DD L
Sbjct: 178 SSFTWDRYELMVENKTSHYTVFHPIQMALIISDV-LAYHGSVKKVAYQIGFLFQSQDDFL 236

Query: 229 DCEEDLPK 236
           D   D PK
Sbjct: 237 DVYGD-PK 243


>gi|281201286|gb|EFA75498.1| geranylgeranyl diphosphate synthase 1 [Polysphondylium pallidum
           PN500]
          Length = 300

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 75/208 (36%), Gaps = 12/208 (5%)

Query: 26  QTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           +  S+  ++ +  LL   +Y +   GK IR+ L+        V+     +V   ++ +H 
Sbjct: 3   KKFSYPLSEKDVALLEPYKYISETPGKGIRTILIEAFNHWLKVDSEYVKKVADIVQALHM 62

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SL+ DD+   DN  +RRG P  H  Y     I   N +   A +  +         I  
Sbjct: 63  SSLLIDDIE--DNSKLRRGMPVAHDIYGYAQTINCANTVYFLAMDECNKLGKPAATTIFI 120

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           + M+ L    G   +              E +   +   KTG L           +    
Sbjct: 121 EEMIRLHRGQGYDILWRDTNSCP-----TEDEYKEMVGEKTGGLFRLGLRLLQTFS---- 171

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
             K       E+LG+ +Q+ DD ++   
Sbjct: 172 ENKTDYSKLVEDLGLYYQIRDDYINLVS 199


>gi|122938158|gb|ABC46412.2| geranylgeranyl diphosphate synthase [Gibberella intermedia]
          Length = 392

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 64/182 (35%), Gaps = 10/182 (5%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR   +        V       +   I  +H  SLI DD    DN  +RRGKP+ H  
Sbjct: 109 KGIRGAFIDSLNVWLEVPEDETSVIKEVIGMLHNSSLI-DD--FQDNSPLRRGKPSTHTV 165

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +    AI     ++  A E I            +  + ++       G            
Sbjct: 166 FGPAQAINTATYVIVKAIEKIQDIVGHDALADVTGTITTIFQ-----GQAMDLWWTANAI 220

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLL 228
                +  ++   +TGAL   + E  A+ + A  S +  E L      LG  FQ+ DD +
Sbjct: 221 VPSIQEYLLMVNDETGALFRLSLELLALNSEASISDSALESLSSAVSLLGQYFQIRDDYM 280

Query: 229 DC 230
           + 
Sbjct: 281 NL 282


>gi|145609303|ref|XP_001409359.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15]
 gi|145016690|gb|EDK01120.1| hypothetical protein MGG_13405 [Magnaporthe oryzae 70-15]
          Length = 728

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 17/213 (7%)

Query: 27  TASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           +   +       +    RY   +  K +RS L+        V   +   +   I+C+H  
Sbjct: 409 SEGSLPGMQAAPVFEPARYIRQMPSKNMRSQLMDCFNLWLEVPQPSLAAIKETIDCLHHS 468

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SLI DD+   D   +RRG P  HI Y    AI +   L   A   +++         R Q
Sbjct: 469 SLILDDIE--DGSDLRRGLPAAHIVYGVGQAINSATHLHVQA---VANMHAMASREGRPQ 523

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +M    H+  L  +  GQ  D+   F      E +   +   KTGA++    E     A 
Sbjct: 524 MMDVFLHH--LNQLFIGQSWDLHWTFHRRCPTEEKYLNMIDQKTGAMLQMLLELMQTAAA 581

Query: 202 AS-----QNEKERLRCFGENLGIIFQLADDLLD 229
           A+     ++ K  L  F    G  FQ+ DD ++
Sbjct: 582 AAKQGVLKDGKHLLWEFTRLFGRFFQVRDDYMN 614


>gi|323450522|gb|EGB06403.1| hypothetical protein AURANDRAFT_59216 [Aureococcus anophagefferens]
          Length = 313

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 70/215 (32%), Gaps = 21/215 (9%)

Query: 30  HMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC------ASLFNVNHLTALRVGA---AIE 80
            ++      +   + Y  +GGK  R  +V E       A    V +    R       IE
Sbjct: 3   EVRPDEVAWIRRMLTYNCIGGKMNRGLMVVETGVVLFEAQGKPVTNDDLCRFAVLGWIIE 62

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLK 139
            +  + L+ DD+  MD+   RRG+P  +        A+     +    F+++        
Sbjct: 63  MLQAWLLVADDM--MDSSLTRRGQPCWYKVDGVGPMALNDAFLIEMVMFKVLKRHFGDAP 120

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAI 198
           +  +   +L  T      G   G             +  MI K KT           G  
Sbjct: 121 EYAKLLDLLMETTLQTELGPALG-------PPFTLDRWTMIVKYKTAFYSFYLPVAMGMT 173

Query: 199 MAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEE 232
           MA      E +  R     +G+ FQ  DD LD   
Sbjct: 174 MAGIDDRAEYDAAREILVIMGVYFQAQDDYLDAFG 208


>gi|115439359|ref|NP_001043959.1| Os01g0695300 [Oryza sativa Japonica Group]
 gi|56785155|dbj|BAD81810.1| putative farnesyl-pyrophosphate synthetase fps2 [Oryza sativa
           Japonica Group]
 gi|113533490|dbj|BAF05873.1| Os01g0695300 [Oryza sativa Japonica Group]
          Length = 307

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 69/209 (33%), Gaps = 27/209 (12%)

Query: 45  YALLGGKKIRSFLVTECASLFNV-----NHLTALRVGAA----IECIHCYSLIHDDLPSM 95
           Y +LGGK  R   V E   +             L +       IE +  Y L+ DD+  M
Sbjct: 4   YNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI--M 61

Query: 96  DNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           DN   RRGKP           AI  G  L +    I           +    + +     
Sbjct: 62  DNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEIQ 121

Query: 155 GLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              G L  Q+   +        +      I + KT     +   + A++        E L
Sbjct: 122 TTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFD-----ESL 176

Query: 211 RCFG--ENL----GIIFQLADDLLDCEED 233
             +   +++    G+ FQ  DD LDC  +
Sbjct: 177 DNYAQVKHILVEMGVYFQSQDDYLDCFGE 205


>gi|157111697|ref|XP_001651688.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
 gi|108878318|gb|EAT42543.1| geranylgeranyl pyrophosphate synthase [Aedes aegypti]
          Length = 289

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 72/192 (37%), Gaps = 16/192 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           ++    + + + GK+ RS +        NV     ++VG  I+ +H  SL+ DD+   D+
Sbjct: 2   VIEPYNHIMKIPGKQFRSRMAVALDHWLNVPFDKMVKVGEIIQLLHNGSLLIDDIQ--DS 59

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  +     +     ++T+A    +       + I    +L L    G  
Sbjct: 60  SVLRRGVPAAHQLFGVQFTMNTACYVITHALIQTNEVGGAAANEIFCHELLELHRGQGA- 118

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                  +  +D  I   E +  ++   KTG L         + +      K        
Sbjct: 119 ------DIFWRDNSICPTEHEYKLMVVRKTGGLFLMLIRLLQLFS----ENKRDFSKLAG 168

Query: 216 NLGIIFQLADDL 227
            +G+ FQ+ DD 
Sbjct: 169 LMGLFFQIRDDY 180


>gi|258514899|ref|YP_003191121.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257778604|gb|ACV62498.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 260

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 82/221 (37%), Gaps = 15/221 (6%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   + S +++  + +   ++  L+  A H+ +  + +  S I YA      IR  LV  
Sbjct: 1   MVNQVFSSIKKELENVYQKIERELVIKAGHISSFAHLK-HSVIDYA------IRPALVIF 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F       L + A  + IH  + +H D+       I  G+     +      ++ G
Sbjct: 54  SGRMFGRLSEKTLALAAVCQFIHMAAQVHVDVNEQSTAQIP-GQEHDP-RDGSQFPVLVG 111

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L    F  +            S+++  +       G+L  +  +I  +   +     +
Sbjct: 112 DYLYGKFFTTLCDYGIVNFLKPLSEIICQINEG----GLLRQK--EINSKVKSQVVARDV 165

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            + +T  L    C   A  A A  +E   L  FG+N G+ +
Sbjct: 166 VRRETAELFAGCCSLAAESAEAGSSECLALYKFGKNFGMAY 206


>gi|78191063|gb|ABB29856.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 234

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 14/174 (8%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  IE +  Y L+ DD+  MDN + RRG+P  +        I   +G+L     I
Sbjct: 1   KASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWYKLPKVGM-IAVNDGILLRN-HI 56

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK 182
               K   +       +L L + +       GQM+D+    + E  +          I +
Sbjct: 57  TRILKNHFRAKPYYVDLLDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLPTHRRIVQ 115

Query: 183 MKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            KT             +MA  + ++   ++     +GI FQ+ DD LDC  D  
Sbjct: 116 YKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPG 169


>gi|332812281|ref|XP_003308877.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like isoform 4
           [Pan troglodytes]
 gi|119590424|gb|EAW70018.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Homo sapiens]
 gi|119590426|gb|EAW70020.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Homo sapiens]
 gi|221039434|dbj|BAH11480.1| unnamed protein product [Homo sapiens]
          Length = 246

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 15/149 (10%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I + N +     E + +       
Sbjct: 1   MLHNASLLIDDIE--DNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAV 58

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    GL        +  +D +    E +   +   KTG L   A     +
Sbjct: 59  KLFTRQLLELHQGQGL-------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQL 111

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   ++ K  L      LG+ FQ+ DD 
Sbjct: 112 FSDYKEDLKPLLNT----LGLFFQIRDDY 136


>gi|260103264|ref|ZP_05753501.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
           20075]
 gi|260082925|gb|EEW67045.1| octaprenyl-diphosphate synthase [Lactobacillus helveticus DSM
           20075]
          Length = 164

 Score = 86.8 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           + T +  L G L GQM +  +     T      K KT AL   A E GA  A  +  +  
Sbjct: 6   AQTMSHILNGEL-GQMAERFNLEQTFTDYLNDIKGKTAALFRLAAEEGAHFAGGNAEQST 64

Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
            L  FGENLGI FQ+ DDLLD   
Sbjct: 65  ALANFGENLGIAFQIVDDLLDYTG 88


>gi|328767086|gb|EGF77137.1| hypothetical protein BATDEDRAFT_14267 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 290

 Score = 86.8 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 76/199 (38%), Gaps = 18/199 (9%)

Query: 39  LLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +L   +Y +   G++IR+ L+      F V       +   +  +H  SL+ DD+   D 
Sbjct: 2   VLEPYQYLIQHPGQEIRNLLIEGFQKWFQVPTEKLAIIKQVVAMLHTASLLVDDVE--DG 59

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  +   + I A N     A E +   K         +++ + T  + L 
Sbjct: 60  SDLRRGVPVTHKIFGVASTINAANYAYFIALENVLMLKD-------VRIVQAFTEELQLL 112

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR--CF 213
            +  G  +  +D  +   E+    + + KTG L       G  M          L     
Sbjct: 113 HLGQGMEIHWRDTVVCPSESDYLKMVENKTGGL----LRLGVRMMQLDIESPAALEYIKL 168

Query: 214 GENLGIIFQLADDLLDCEE 232
              +G+ +Q+ DD L+ + 
Sbjct: 169 VNLIGVFYQVRDDYLNLKS 187


>gi|258597332|ref|XP_001347966.2| farnesyl pyrophosphate synthase, putative [Plasmodium falciparum
           3D7]
 gi|254832668|gb|AAN35879.2| farnesyl pyrophosphate synthase, putative [Plasmodium falciparum
           3D7]
          Length = 376

 Score = 86.8 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 82/254 (32%), Gaps = 44/254 (17%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH------LTAL 73
           ++D +L+    +      +LL    Y  LGGK  R  LV                     
Sbjct: 32  INDYVLEDDIKIIISKYYKLL--FDYNCLGGKNNRGILVILIYEYVKNRDINCNEWEKVA 89

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE--VTAIIAGNGLLTYAFEII 131
            +   IE +    L+ DD+  MD G  RR K   ++  D     A+     L    ++++
Sbjct: 90  CIAWCIEILQASFLVADDI--MDKGETRRNKHCWYLLKDVEIKNAVNDVFLLYNAIYKLL 147

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---------------MLDIQDEFIDETQ 176
                 L+++     +++      L+ ++G                  +D+ +  I +  
Sbjct: 148 ---DVYLRNDNCYLDLITSFREATLKTIVGQHLDTNIFSDKYSHIDKDIDVNNINISQEN 204

Query: 177 -----------VFMIQKMKTGAL-MCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQ 222
                         I   KT           G  M   S +    +++      +G  FQ
Sbjct: 205 KININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQMGGISLDNLLYKKVENIAILMGEYFQ 264

Query: 223 LADDLLDCEEDLPK 236
           + DD +D   D  K
Sbjct: 265 VHDDYIDTFGDSKK 278


>gi|29124957|gb|AAO63552.1| putative farnesyl pyrophosphate synthase [Plasmodium falciparum]
          Length = 362

 Score = 86.8 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 82/254 (32%), Gaps = 44/254 (17%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNH------LTAL 73
           ++D +L+    +      +LL    Y  LGGK  R  LV                     
Sbjct: 32  INDYVLEDDIKIIISKYYKLL--FDYNCLGGKNNRGILVILIYEYVKNRDINCNEWEKVA 89

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE--VTAIIAGNGLLTYAFEII 131
            +   IE +    L+ DD+  MD G  RR K   ++  D     A+     L    ++++
Sbjct: 90  CIAWCIEILQASFLVADDI--MDKGETRRNKHCWYLLKDVEIKNAVNDVFLLYNAIYKLL 147

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ---------------MLDIQDEFIDETQ 176
                 L+++     +++      L+ ++G                  +D+ +  I +  
Sbjct: 148 ---DVYLRNDNCYLDLITSFREATLKTIVGQHLDTNIFSDKYSHIDKDIDVNNINISQEN 204

Query: 177 -----------VFMIQKMKTGAL-MCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQ 222
                         I   KT           G  M   S +    +++      +G  FQ
Sbjct: 205 KININMLNFKVYQNIIIHKTAYYSFFLPIVCGMQMGGISLDNLLYKKVENIAILMGEYFQ 264

Query: 223 LADDLLDCEEDLPK 236
           + DD +D   D  K
Sbjct: 265 VHDDYIDTFGDSKK 278


>gi|297661612|ref|XP_002809327.1| PREDICTED: geranylgeranyl pyrophosphate synthase-like [Pongo
           abelii]
          Length = 246

 Score = 86.8 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 15/149 (10%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   DN  +RRG P  H  Y   + I + N +     E + +       
Sbjct: 1   MLHNASLLIDDIE--DNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAV 58

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            + ++ +L L    GL        +  +D +    E +   +   KTG L   A     +
Sbjct: 59  KLFTRQLLELHQGQGL-------DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQL 111

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227
            +   ++ K  L      LG+ FQ+ DD 
Sbjct: 112 FSDYKEDLKPLLNT----LGLFFQIRDDY 136


>gi|116199155|ref|XP_001225389.1| farnesyl pyrophosphate synthetase [Chaetomium globosum CBS 148.51]
 gi|88179012|gb|EAQ86480.1| farnesyl pyrophosphate synthetase [Chaetomium globosum CBS 148.51]
          Length = 267

 Score = 86.8 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 85/244 (34%), Gaps = 26/244 (10%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLV------ 58
           +   +  + +   L      H     +  Q  D    +++   +GGK  R   V      
Sbjct: 4   KTTLQEFEAVFPKLEAALVEHANTYKLPAQALDWYKKSLQVNAVGGKCNRGMSVPDSVSM 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                L    +  A  +G   E +  + L+ DD+  MD+   RRGKP  + Q       I
Sbjct: 64  LLERPLTEDEYFQAATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYRQEGVGMIAI 121

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--------IQDE 170
               +L  A   +   K   + + R   +L L H +  Q  + GQ+ D        +  +
Sbjct: 122 NDAFMLEAAIYTL--LKKFFRSHPRYVDLLELFHEVTYQTEI-GQLCDLLTAPEDVVDLD 178

Query: 171 FIDETQVFMIQKMKTGALMCFACESGA--IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                +   I   KT     +   + A  ++  A+    ++       LG  FQ+ DD L
Sbjct: 179 NFSMEKYRFIVVYKTAYYSFYLPVALALYMLDIATPENLKQAEDILIPLGEYFQIQDDYL 238

Query: 229 DCEE 232
           D   
Sbjct: 239 DNFG 242


>gi|146413673|ref|XP_001482807.1| hypothetical protein PGUG_04762 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 329

 Score = 86.8 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 14/176 (7%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           NH T   +   I   H  SL+ DD+   D    RRG P  H +Y     +  GN +   A
Sbjct: 53  NHDTIATISEVITVFHNSSLLIDDIE--DGSEFRRGLPAAHTKYGVALTLNCGNLMYFVA 110

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGML-----GGQMLDIQDEFID-----ETQV 177
            +       Q   +     +     NI ++ +L      G  +  +D           + 
Sbjct: 111 LQTAQQKLPQYHPSDNKNDIALSILNILVEELLNLHHGQGLDIHWRDHLKTTKLPLIEEY 170

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
             +   KTG L   A +     +  +  ++  +       GI+FQ+ DDL++  +D
Sbjct: 171 MEMIMNKTGGLFRLAVKLLGAFS--TPQDEPTVLAIANLFGIVFQIRDDLMNLVDD 224


>gi|330923188|ref|XP_003300141.1| hypothetical protein PTT_11298 [Pyrenophora teres f. teres 0-1]
 gi|311325882|gb|EFQ91767.1| hypothetical protein PTT_11298 [Pyrenophora teres f. teres 0-1]
          Length = 347

 Score = 86.8 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 25/251 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           +    K  +++   ++     H     +     D    ++ Y  +GGK  R   V +  S
Sbjct: 1   MATTLKDFESVWPRIVADLQDHCKGYKLPQNCLDWFTKSLEYNTIGGKCNRGMSVVDTTS 60

Query: 64  LF--------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           +         +  +  A  +G  IE +  + L+ DD+  MD+   RRG P  ++      
Sbjct: 61  ILQNKTLKPGSEEYFRAALLGWMIEFLQAFFLVSDDI--MDSSKTRRGNPCWYLAPKVGM 118

Query: 116 AIIAGNGLLTYAFEII-----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
             +  + +L  +  I+        K+ +      Q +   T    L  ++     D+  +
Sbjct: 119 IALNDSFMLEASIYILLKKHFRQDKSYIDMVELFQEVTFQTECGQLCDLITAPEDDVDLD 178

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIM--AHASQNEKERLRCFGENLGIIFQLADDLL 228
                +   I   KT     +   + A+     A+    +        +G  FQ  DD L
Sbjct: 179 KFSLEKFTFIVIYKTAYYSFYLPVALALYYTGAATPKNLKTAEDILIPMGEYFQAQDDYL 238

Query: 229 DCEED---LPK 236
           D   D   L K
Sbjct: 239 DAFADPKVLGK 249


>gi|149238027|ref|XP_001524890.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451487|gb|EDK45743.1| hypothetical protein LELG_03922 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 347

 Score = 86.8 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 18/169 (10%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP-KT 136
            IE +H  SL+ DD+   D+   RRG P+ H++Y     I  GN +   A E + +  + 
Sbjct: 64  VIEILHNASLLIDDVE--DSSNFRRGYPSAHMKYGVPLTINCGNLMYFEAIEKVYNLWRL 121

Query: 137 QLKDNIRSQLMLSLTHNIGLQGM---LGGQMLD--IQDEFIDET------QVFMIQKMKT 185
           +L     +   L+L   I +  M     GQ LD   +D   D            + K KT
Sbjct: 122 KLGKEDTTLATLALVWEIVMPEMKNFHKGQGLDIYWRDNLPDLESLPSVVDYCQMAKDKT 181

Query: 186 GALMCFACESGAIMAHA----SQNEKERLRCFGENLGIIFQLADDLLDC 230
           G L   A     + +                    LG+I+Q+ DD L+ 
Sbjct: 182 GGLFRLAVRLLRLFSSGSTHLDSEYNGVFESIANCLGVIYQIRDDYLNI 230


>gi|209877823|ref|XP_002140353.1| polyprenyl synthetase family protein [Cryptosporidium muris RN66]
 gi|209555959|gb|EEA06004.1| polyprenyl synthetase family protein [Cryptosporidium muris RN66]
          Length = 340

 Score = 86.4 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 17/206 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLF--NVNH---LTALRVGAAIECIHCYSLIHDDLPSMDN 97
           + Y + GGK +R   + E A     N +       L  G  IE +  + L+ DD+  MD 
Sbjct: 44  LNYNIEGGKYMRGITLVEVAYKCWNNGDKILWDEVLTAGWCIEILQAFFLVGDDI--MDG 101

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
           G +RRGK   +I       +     L   +  ++         +  +++M  L   I   
Sbjct: 102 GEMRRGKVCWYISQGLSMGLNDSFCLYIMSELLMKGALKSYSMDTLARIMDLLHRCI--F 159

Query: 158 GMLGGQMLDIQD------EFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERL 210
             + GQ LD         E +DE + F + +MKT    +      G ++A+++      +
Sbjct: 160 YTILGQHLDTSPLCLKSTENLDE-RYFAMIQMKTSYYSIYLPICIGLLLANSTSGIPLEV 218

Query: 211 RCFGENLGIIFQLADDLLDCEEDLPK 236
             F   +G   Q+ +D LD   +  K
Sbjct: 219 EHFSRIIGEYLQIENDFLDYFGNNEK 244


>gi|42523219|ref|NP_968599.1| putative octaprenyl-diphosphate synthase [Bdellovibrio
           bacteriovorus HD100]
 gi|39575424|emb|CAE79592.1| putative octaprenyl-diphosphate synthase [Bdellovibrio
           bacteriovorus HD100]
          Length = 329

 Score = 86.4 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 21/219 (9%)

Query: 23  LLLQTASHMQTQHNDRLLSAIR-YALLGGKKIRSFLVTECASLFNVNHLTALR------- 74
           L + +AS ++   +  L    R +     K+ R+ LV+    L++       +       
Sbjct: 9   LQVSSASSVEQFWSTFLHDPAREFMSRPKKEFRAELVSLGCRLYSKGAPLTEKQKSVIAE 68

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +   +E IH  SLI DD+   D+   RRG PT H  Y    A+  GN +    FE +   
Sbjct: 69  LSRVLEWIHAGSLIVDDIQ--DDSLERRGGPTAHRLYGVGPALNLGNWMY---FEALKGL 123

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFIDETQVFMI----QKMKTGAL 188
                D+     ++S  H   +     GQ LD     + +   Q+  +      +K+GAL
Sbjct: 124 HALPVDDSVKLKIISCAHE-AMHQAHLGQALDLGANMKTLSAEQIQEVVHKSHSLKSGAL 182

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +  A + GA++  A Q + + L+  G  LG   Q  DDL
Sbjct: 183 VALAMQVGALIGDA-QADLQLLQELGMQLGSSLQRFDDL 220


>gi|189210164|ref|XP_001941414.1| farnesyl pyrophosphate synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187977507|gb|EDU44133.1| farnesyl pyrophosphate synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 347

 Score = 86.4 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 25/251 (9%)

Query: 9   LQENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           +    K  +++   ++     H     +     D    ++ Y  +GGK  R   V +  S
Sbjct: 1   MATTLKDFESVWPRIVADLQDHCKGYNLPQNCLDWFTKSLSYNTIGGKCNRGMSVVDTTS 60

Query: 64  LF--------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           +         +  +  A  +G  IE +  + L+ DD+  MD+   RRG P  ++      
Sbjct: 61  ILQNKTLEPGSEEYFRAALLGWMIEFLQAFFLVSDDI--MDSSKTRRGNPCWYLAPKVGM 118

Query: 116 AIIAGNGLLTYAFEII-----SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
             +  + +L  +  I+        K+ +      Q +   T    L  ++     D+  +
Sbjct: 119 IALNDSFMLEASIYILLKKHFRQDKSYIDMVELFQEVTFQTECGQLCDLITAPEDDVDLD 178

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIM--AHASQNEKERLRCFGENLGIIFQLADDLL 228
                +   I   KT     +   + A+     A+    +        +G  FQ  DD L
Sbjct: 179 KFSLEKFTFIVIYKTAYYSFYLPVALALYYTGAATPKNLKTAEDILIPMGEYFQAQDDYL 238

Query: 229 DCEED---LPK 236
           D   D   L K
Sbjct: 239 DAFADPKVLGK 249


>gi|195029339|ref|XP_001987531.1| GH19915 [Drosophila grimshawi]
 gi|193903531|gb|EDW02398.1| GH19915 [Drosophila grimshawi]
          Length = 413

 Score = 86.4 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 75/230 (32%), Gaps = 21/230 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNHL 70
            ++ DL   T ++            ++Y +  GKK R  L             L   N  
Sbjct: 87  DVVRDLTNATKAYNCRDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPADQLTPENIK 146

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+   H+  +    AI     +    + 
Sbjct: 147 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQKCWHMVENVGLNAINDALMIENAMYA 204

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF-----IDETQVFMIQKMK 184
           I+    + L   +    +      I       GQ LD+ +               I + K
Sbjct: 205 ILKQHFSHLDCYVALMELFHEITYITTC----GQSLDLLNSNKSVSEFSMDNYKAIVENK 260

Query: 185 TGAL-MCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           T              +A         + +     +G  FQ+ DD LDC  
Sbjct: 261 TAYYSFYLPFAIAMHLAGYKDPEAFRQSKTILLEMGNFFQVQDDFLDCFG 310


>gi|260940298|ref|XP_002614449.1| hypothetical protein CLUG_05935 [Clavispora lusitaniae ATCC 42720]
 gi|238852343|gb|EEQ41807.1| hypothetical protein CLUG_05935 [Clavispora lusitaniae ATCC 42720]
          Length = 358

 Score = 86.0 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 35/210 (16%)

Query: 52  KIRSFLVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           + R FLV      F +++   L  +G  I   H  SL+ DD+   D+  +RRG P  H +
Sbjct: 39  RYR-FLVAFNMRFFKIDNTQVLSEIGDIIAIFHNASLLIDDIE--DSSELRRGHPCAHTK 95

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL------------------MLSLTH 152
           Y     I +GN +   A +   +    L   ++ Q                   +   T+
Sbjct: 96  YGVPLTINSGNLMYFVALQRAITALPNLWLELQEQKGIGYGQSGTDLTVVNPSVIECKTN 155

Query: 153 NIGLQGML---GGQMLDIQDEFI---------DETQVFMIQKMKTGALMCFACESGAIMA 200
            I +  ML    GQ LDI                 +   +   KTG L   + +  A+ +
Sbjct: 156 RILVDEMLNLHQGQGLDIYWRDSLHEIMENLPTIEEYLSMVMNKTGGLFRLSVKLLALFS 215

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
             S  + E L      LGII+Q+ DD L+ 
Sbjct: 216 -PSPLQVETLIPLANLLGIIYQIRDDYLNL 244


>gi|24796660|gb|AAN62522.1| farnesyl pyrophosphate synthetase [Eucommia ulmoides]
          Length = 319

 Score = 86.0 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 80/235 (34%), Gaps = 27/235 (11%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------------- 67
            +LL   A  +     + +   + Y + GGK  R   V +   L                
Sbjct: 17  KELLHDPAFSLTEDSRNWVERMLDYNVPGGKLNRGLSVVDSYKLLKELSSSKKGAQLTES 76

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +  +G  +E +   +L+ DD+  MD+ + RRG+   +        I   +GL+   
Sbjct: 77  EIFHSSVLGWCVEWLQACALVLDDI--MDSSHTRRGQMCWYKLPKVGM-IAINDGLILRN 133

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FM 179
             +    K   +       +L L H +     +GGQM+D+    + E  +          
Sbjct: 134 -HVPRILKKHFRSKPYYLELLDLFHEVE-CQTVGGQMIDLITTLVGEIDLSEYSLPTHRQ 191

Query: 180 IQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KT             +M          ++     +G  FQ+ DD LDC  D
Sbjct: 192 ITVSKTSYYSFYLPVACALLMTGEKLESHSGMKDILIEMGSYFQVQDDYLDCFGD 246


>gi|85543983|pdb|1YHK|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase
 gi|85543984|pdb|1YHL|A Chain A, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
           Diphosphate Synthase With Risedronate, Dmapp And Mg+2
 gi|288563001|pdb|3IBA|A Chain A, Crystal Structure Of The Complex Of Trypanosoma Cruzi
           Farnesyl Diphosphate Synthase With Zoledronate, Ipp And
           Mg2+
 gi|288563002|pdb|3ICK|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
           In Complex With Minodronate And Isopentenyl Disphosphate
 gi|288563003|pdb|3ICM|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
           In Complex With Isopentenyl Pyrophosphate, Mg2+ And
           1-(2-
           Hydroxy-2,2-Bis-Phosphono-Ethyl)-3-Phenyl-Pyridinium
 gi|288563004|pdb|3ICN|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
           In Complex With Isopentenyl Pyrophosphate And
           3-Fluoro-1-(2-
           Hydroxy-2,2-Bis-Phosphono-Ethyl)-Pyridinium
 gi|288563005|pdb|3ICZ|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
           In Complex With
           1-(2,2-Bis-Phosphono-Ethyl)-3-Butyl-Pyridinium And
           Isopentenyl Pyrophosphate
 gi|288563006|pdb|3ID0|A Chain A, Trypanosoma Cruzi Farnesyl Diphosphate Synthase Homodimer
           In Complex With
           3-Fluoro-1-(2-Hydroxy-2,2-Bisphosphono-Ethyl) Pyridinium
 gi|14647139|gb|AAK71861.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi]
          Length = 362

 Score = 86.0 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 85/257 (33%), Gaps = 38/257 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------N 66
             +   L D L Q+   +       L   +    LGGK  R   V   A  F        
Sbjct: 12  DEVQAFLLDQL-QSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDE 70

Query: 67  VNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT--AIIAG 120
                 L         IE +  + L+ DD+  MD   +RRGKP  +      T  AI  G
Sbjct: 71  ATKERILHDACVGGWMIEFLQAHYLVEDDI--MDGSVMRRGKPCWYRFPGVTTQCAINDG 128

Query: 121 NGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTHNIGLQG----MLG--------GQM 164
             L ++  +I++    + +  LKD +     +     +G       M           Q 
Sbjct: 129 IILKSW-TQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQP 187

Query: 165 LDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERL-RCFGENLGIIFQ 222
           +              I K KT           G  ++ A+ + +  L       +G  FQ
Sbjct: 188 MTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVAHLIGEYFQ 247

Query: 223 LADDLLDCE---EDLPK 236
           + DD++DC    E L K
Sbjct: 248 VQDDVMDCFTPPEQLGK 264


>gi|134082876|emb|CAK42706.1| unnamed protein product [Aspergillus niger]
          Length = 619

 Score = 86.0 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 10/216 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           LDD   +      T   + LL+   Y A L  K +R   +        +       + + 
Sbjct: 386 LDD--REKERDRVTLGTEHLLAPAEYIASLPSKGVREAFIDALNVWLALPDRFVSVMKSI 443

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            + +H  SL+ DD+   D   +RRG+P  H  + +   I + N +L  A + +      L
Sbjct: 444 AKTLHNASLMLDDIE--DGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVR----LL 497

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
           +D+    + +  T N+ + G         QDE   E +   + + KTG L          
Sbjct: 498 EDSRCLDIFVEETRNLFI-GQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQ 556

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            A + +N    L    + +G  FQ+ DD  +  E++
Sbjct: 557 KATSKKNRCLPLEPLVDLMGEYFQIRDDYKNLAEEV 592


>gi|78191061|gb|ABB29855.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 234

 Score = 86.0 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 17/178 (9%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  IE +  Y L+ DD+  MDN + RRG+P  +        I   +G+L     I
Sbjct: 1   KASALGWCIEWLQAYFLVLDDV--MDNSHTRRGQPCWYKLPKVGM-IAVNDGILLRN-HI 56

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK 182
               K   +       +L L + +       GQM+D+    + E  +          I +
Sbjct: 57  TRILKNHFRAKPYYVDLLDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLPTHRRIVQ 115

Query: 183 MKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            KT             +MA  + ++   ++     +GI FQ+ DD LDC  D   L K
Sbjct: 116 YKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK 173


>gi|320586989|gb|EFW99652.1| farnesyl pyrophosphate synthetase [Grosmannia clavigera kw1407]
          Length = 347

 Score = 86.0 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 91/248 (36%), Gaps = 34/248 (13%)

Query: 10  QENSKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLV------ 58
           +   K  + +   L++ LL+ A    +  ++      ++    LGGK  R   V      
Sbjct: 4   KTTLKEFEAVFPKLEETLLRHAKKYGLPEEYLQWYKKSLETNPLGGKCNRGMSVPDSVSV 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
               +L    +  A  +G   E +  + LI DD+  MD+   RRG P  + Q        
Sbjct: 64  LLGRALTEKEYFQAATLGWLTELLQAFFLISDDI--MDSSITRRGNPCWYRQEG------ 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQGMLGGQMLD-------- 166
            G   +  AF + S+  T L+++ RS      M+ L H +  Q  L GQ+ D        
Sbjct: 116 VGMVAINDAFMLESAIYTLLREHFRSHPSYVDMIELFHEVTFQTEL-GQLTDLLTAPEDI 174

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLA 224
           +        +   I   KT     +   + A+  +   +    +        +G  FQ+ 
Sbjct: 175 VNLNNFSLEKYRFIVIYKTAYYSFYLPVALALHLLELGTPENLKTAESILIPMGEYFQVQ 234

Query: 225 DDLLDCEE 232
           DD LD   
Sbjct: 235 DDYLDNFG 242


>gi|15289750|dbj|BAB16687.2| putative FPP synthase 1 [Eucommia ulmoides]
          Length = 348

 Score = 86.0 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 80/235 (34%), Gaps = 27/235 (11%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------------- 67
            +LL   A  +     + +   + Y + GGK  R   V +   L                
Sbjct: 17  KELLHDPAFSLTEDSRNWVERMLDYNVPGGKLNRGLSVVDSYKLLKELSSSKKGAQLTES 76

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
               +  +G  IE +   +L+ DD+  MD+ + RRG+   +        I   +GL+   
Sbjct: 77  EIFHSSVLGWCIEWLQACALVLDDI--MDSSHTRRGQMCWYKLPKVGM-IAINDGLILRN 133

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FM 179
             +    K   +       +L L H +     +GGQM+D+    + E  +          
Sbjct: 134 -HVPRILKKHFRSKPYYLELLDLFHEVE-CQTVGGQMIDLITTLVGEIDLSEYSLPTHRQ 191

Query: 180 IQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KT             +M          ++     +G  FQ+ DD LDC  D
Sbjct: 192 ITVSKTSYYSFYLPVACALLMTGEKLESHSGMKDILIEMGSYFQVQDDYLDCFGD 246


>gi|222619102|gb|EEE55234.1| hypothetical protein OsJ_03111 [Oryza sativa Japonica Group]
          Length = 358

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 68/209 (32%), Gaps = 27/209 (12%)

Query: 45  YALLGGKKIRSFLVTECASLFNV-----NHLTALRVGAA----IECIHCYSLIHDDLPSM 95
           Y +LGGK  R   V E   +             L +       IE +  Y L+ DD+  M
Sbjct: 55  YNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDI--M 112

Query: 96  DNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           DN   RRGKP           AI  G  L +    I           +    + +     
Sbjct: 113 DNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEIQ 172

Query: 155 GLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              G L  Q+   +        +      I + KT     +   + A++        E L
Sbjct: 173 TTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFD-----ESL 227

Query: 211 RCFGE------NLGIIFQLADDLLDCEED 233
             + +       +G+ FQ  DD LDC  +
Sbjct: 228 DNYAQVKHILVEMGVYFQSQDDYLDCFGE 256


>gi|255955563|ref|XP_002568534.1| Pc21g15240 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590245|emb|CAP96421.1| Pc21g15240 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 347

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 69/206 (33%), Gaps = 27/206 (13%)

Query: 47  LLGGKKIRSF------LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
           + GGK  R        L      L +        +G   E +  + L+ DD+  MD+   
Sbjct: 46  VPGGKLNRGLSVPDTGLALLKQPLTDEQFEHLSILGWMTELLQAFFLVSDDM--MDSSIT 103

Query: 101 RRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQ 157
           RRG+P  +           G   +  AF + +     LK   RS      +    +    
Sbjct: 104 RRGQPCWYRHEG------VGLIAINDAFMLEAGIYLILKQRFRSHPAYIDMVELFHETTW 157

Query: 158 GMLGGQMLD--------IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEK 207
               GQ+ D        +  +     +   I   KT     +   + A+M    A++   
Sbjct: 158 QTELGQLCDLITAPEDNVNLDNFSMEKYMFIVTYKTAYYSFYLPVALALMYLQLATEENL 217

Query: 208 ERLRCFGENLGIIFQLADDLLDCEED 233
           ++       LG  FQ+ DD LD   D
Sbjct: 218 KQAHDILIPLGQYFQIQDDYLDNFGD 243


>gi|331212589|ref|XP_003307564.1| hypothetical protein PGTG_00514 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309297967|gb|EFP74558.1| hypothetical protein PGTG_00514 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 369

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 40/238 (16%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT------ALRVGAAIECI 82
            ++ +   D   + + Y   GGK  R   V +   +     L       A  +G  +E +
Sbjct: 37  ENLPSDALDWFEANLEYNTPGGKLNRGTSVVDTLQILKGRELDSKEYHSAAVLGWCVELL 96

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
             Y L+ DD+  MD+   RRG+P  +       A   GN  +  +F + +S    LK + 
Sbjct: 97  QAYFLVADDM--MDHSLTRRGQPCWYK------APKVGNIAINDSFMLEASIYVLLKKHF 148

Query: 143 RSQL----MLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT-GALM 189
           R+      +L L H+   Q  L GQ++D+     D   +         +I   KT     
Sbjct: 149 RNHPAYVTLLELFHDTTYQTEL-GQLVDLLTAPEDSVDLSKFSVEKHHLIVVYKTSFYSF 207

Query: 190 CFACESGAIMAH------------ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                    +              +S +  ++       LG  FQ+ DD LDC  D  
Sbjct: 208 YLPVALAMRLHGITSPSDPGSTGSSSIDLYKQAMDILLPLGEYFQVQDDYLDCYGDSE 265


>gi|403318|emb|CAA81272.1| hexaprenyl pyrophosphate synthetase [Saccharomyces cerevisiae]
 gi|1582566|prf||2118405G hexaprenyl pyrophosphate synthetase
          Length = 285

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 11/102 (10%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSISR 234

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
                   + S  +           ++ G+ + +++  ID  
Sbjct: 235 LHNPEVVELMSNSIA---------NLVEGEFMQLKNTSIDAD 267


>gi|268569452|ref|XP_002640526.1| Hypothetical protein CBG18688 [Caenorhabditis briggsae]
 gi|187024775|emb|CAP36098.1| CBR-FDPS-1 protein [Caenorhabditis briggsae AF16]
          Length = 351

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 29/248 (11%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-------------ALLGGKKIRSFL 57
            + K ++T L ++  +    +  +        + Y              ++GGK  R+ L
Sbjct: 3   ASRKLVETALGEVKKKFVRVVSAKLP---ADGMEYDLVQYRCKNLFDNTVIGGKYSRASL 59

Query: 58  VTECASLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
             +                       A +E I  + LI DD+  MDN   RRGKP    +
Sbjct: 60  CVDTIRALQPHLREETQELQAVCEAAATLEIIQSFYLIADDI--MDNSETRRGKPCWFRR 117

Query: 111 YDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 AI     + ++  +I+        +  R       +    L G         Q 
Sbjct: 118 EGVGMSAINDAFIMDSFVEDILRLALPGHINLDRLCEAYRKSKQKTLIGQFLDTSSVNQI 177

Query: 170 EFIDETQVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 +  ++ + KT     F   +   I++         ++     +G +FQ  DD L
Sbjct: 178 ASFTWDRYELMVENKTSHYTVFHPLQMALIISDV-LAYHGSVKKAAYQIGFLFQSQDDFL 236

Query: 229 DCEEDLPK 236
           D   D PK
Sbjct: 237 DVYGD-PK 243


>gi|118379849|ref|XP_001023090.1| Polyprenyl synthetase family protein [Tetrahymena thermophila]
 gi|89304857|gb|EAS02845.1| Polyprenyl synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 465

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 15/193 (7%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN--GYIRRGKP 105
            GGK+IR       A  +N        +G   +    Y LI   +  + N     RR K 
Sbjct: 173 RGGKRIRPIFCALIAEAYNHKLTIQKMIGNIFKM--NY-LI---VQQIANLKSLKRREKD 226

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            VHI Y    +I A N         + + K   +  I SQL L   + +    +  G  L
Sbjct: 227 AVHIIYGVDISINAANYGYYAPLNYLLNLKKYNQKTI-SQLSLIYAYEMSQIHLGQGWDL 285

Query: 166 DIQDEFI------DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              ++         E Q   +   KTGAL         ++ +  +   + L  F E +G 
Sbjct: 286 LWHNQKKESLKIPTEQQYLQMVVNKTGALFRMMIRMLGVVLNLEERNVKMLSLFTEKVGA 345

Query: 220 IFQLADDLLDCEE 232
           +FQ+ DD+++ + 
Sbjct: 346 VFQIQDDIINLDS 358


>gi|318059311|ref|ZP_07978034.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces sp.
           SA3_actG]
          Length = 370

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 61/252 (24%), Positives = 100/252 (39%), Gaps = 40/252 (15%)

Query: 13  SKRIDTILDDLLL-------QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           S  +  +L+ LL        +  +    Q    L +  R    GG+++RS  V     + 
Sbjct: 19  SAAVAEVLERLLAPRVAEAARLDASFGRQVAQWLAATTR---GGGRRLRSAFVWWGLRVA 75

Query: 66  -----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------- 110
                      AL VGAA+E +   +L+ DD+  MDN  +RRG+P +H+           
Sbjct: 76  CPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRGQPALHVLLGSTRPAAAG 133

Query: 111 -----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                + +  A++AG+  + +A +  +      +     + + S+        M+ GQ L
Sbjct: 134 PGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLWSVLRT----EMIAGQYL 189

Query: 166 D---IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D     D     T       +K+G   +    E GA++A A       LR  G   G+ F
Sbjct: 190 DLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAAPPEVCRVLRAAGGAAGLAF 249

Query: 222 QLADDLLDCEED 233
           QL DDLL    D
Sbjct: 250 QLRDDLLAVWGD 261


>gi|331236250|ref|XP_003330784.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|309309774|gb|EFP86365.1| geranylgeranyl pyrophosphate synthetase [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 403

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 70/213 (32%), Gaps = 38/213 (17%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           + + Q            LL    Y     GK+IRS ++       +V       V   + 
Sbjct: 118 ERMKQNNPDWSEPQERILLEPFTYLTSTPGKEIRSMMIDAFNHWLSVPTEQLNIVKRIVG 177

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   D   +RRG P  H  Y     I + N +   A++ +S        
Sbjct: 178 LLHTASLLMDDVE--DGSELRRGIPVAHKIYGIPQTINSANYVYFLAYQELSMLHPSQDS 235

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
           +  +   L                                    TG L   A +   +MA
Sbjct: 236 SASNLWKLINE---------------------------------TGGLFRIAIKL--MMA 260

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +   +        + +GIIFQ+ DDLL+   D
Sbjct: 261 MSPLQQIPDYVPLVDLIGIIFQIRDDLLNLSSD 293


>gi|71425811|ref|XP_813173.1| farnesyl pyrophosphate synthase [Trypanosoma cruzi strain CL
           Brener]
 gi|70878032|gb|EAN91322.1| farnesyl pyrophosphate synthase, putative [Trypanosoma cruzi]
          Length = 346

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 85/256 (33%), Gaps = 36/256 (14%)

Query: 14  KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------N 66
             +   L D L Q+   +       L   +    LGGK  R   V   A  F        
Sbjct: 12  DEVQAFLLDQL-QSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDE 70

Query: 67  VNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                 L         IE +  + L+ DD+  MD   +RRGKP  +      T     +G
Sbjct: 71  ATKERILHDACVGGWMIEFLQAHYLVEDDI--MDGSVMRRGKPCWYRFPGVTTQCAINDG 128

Query: 123 LLTYAF-EIIS----SPKTQLKDNIRSQLMLSLTHNIGLQG----MLG--------GQML 165
           ++  ++ +I++    + +  LKD +     +     +G       M           Q +
Sbjct: 129 IILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPM 188

Query: 166 DIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERL-RCFGENLGIIFQL 223
                         I K KT           G  ++ A+ + +  L       +G  FQ+
Sbjct: 189 TTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVAHLIGEYFQV 248

Query: 224 ADDLLDCE---EDLPK 236
            DD++DC    E L K
Sbjct: 249 QDDVMDCFTPPEQLGK 264


>gi|3122099|sp|Q92235|FPPS_GIBFU RecName: Full=Farnesyl pyrophosphate synthase; Short=FPP synthase;
           Short=FPS; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase; AltName: Full=Dimethylallyltranstransferase;
           AltName: Full=Farnesyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|1524043|emb|CAA65641.1| farnesyl pyrophosphate synthetase [Gibberella fujikuroi]
          Length = 347

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 91/247 (36%), Gaps = 32/247 (12%)

Query: 10  QENSKRIDTI---LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           Q   +  +++   L++ LL  A    +  +  D    ++    LGGK  R   V +  SL
Sbjct: 4   QTTLQEFNSVYPKLEEALLDHARSYKLPQEQLDWYKRSLEVNPLGGKCNRGMSVPDSVSL 63

Query: 65  F------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                     +  A  +G   E +  + L+ DD+  MD+   RRG+P  + Q        
Sbjct: 64  LLEKPLTEEQYFQAATLGWMTELLQAFFLVSDDI--MDSSITRRGQPCWYRQEG------ 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLD--------I 167
            G   +  AF + S+  T LK   RS      L  + +        GQ+ D        +
Sbjct: 116 VGMIAINDAFMLESAIYTLLKKYFRSHPAYFDLIESFHETTFQTELGQLCDLLTAPEDNV 175

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLAD 225
             +     +   I   KT     +   + A+  +  A+ +  ++       LG  FQ+ D
Sbjct: 176 NLDNFSLEKYSFIVIYKTAYYSFYLPVALALHQLNLATPSNLKQAEDILIPLGEYFQIQD 235

Query: 226 DLLDCEE 232
           D LD   
Sbjct: 236 DYLDNFG 242


>gi|170096356|ref|XP_001879398.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645766|gb|EDR10013.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 364

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 82/239 (34%), Gaps = 24/239 (10%)

Query: 16  IDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLT--- 71
              I ++LL   A   M  +  +     + Y + GGK  R   V +   +   + LT   
Sbjct: 15  FAAIREELLQHFAGEGMPVEAVEWYRKNLDYNVPGGKLNRGISVVDTVEILKGSALTEDE 74

Query: 72  ---ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYA 127
              A  +G  IE +  + L+ DD+  MD+   RR +P  +   +    AI     L    
Sbjct: 75  YFKAAVLGWCIELLQAFFLVSDDI--MDSSITRRSQPCWYRLPEIGMIAINDSFILEAAI 132

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKM 183
           ++++ +     K  +    +   T      G L   +   +D          +   I   
Sbjct: 133 YQLLKTHFRSEKFYVDLLELFHETTYQTEMGQLVDLITAPEDHVDLNKFSLDRHRSIVIY 192

Query: 184 KTGALMCFACESGAI----------MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT     +   + A+           +  +Q   E  +     LG  FQ+ DD LD   
Sbjct: 193 KTAYYSFYLPVACALHLLNIPESYTASGVTQKPYEISKSILLPLGEYFQIQDDFLDYSA 251


>gi|89894766|ref|YP_518253.1| hypothetical protein DSY2020 [Desulfitobacterium hafniense Y51]
 gi|89334214|dbj|BAE83809.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 288

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 21/191 (10%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L+     +F  +  T +    A+E     + I DD+   DN  +               A
Sbjct: 17  LLFTIGDVFGDSQETIVHGAVAMELYALAADIFDDIEDQDNDELP------WRTIPAAQA 70

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF---ID 173
           I   N +L  +F+ +++    + D    +    +   +G+     GQ  +   E    I 
Sbjct: 71  INTANLILFLSFKALAA----INDQALYRQANDIFQTMGIT-ACHGQNQEFLYEGQDAIT 125

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD---- 229
             Q F   + K+GAL   AC+   ++A    +    L  FG+NLGII Q+ +DL D    
Sbjct: 126 LAQYFDTARKKSGALTAGACKLAGVLAGCDTSLILDLDKFGQNLGIISQIKNDLQDLFRV 185

Query: 230 -CEED--LPKK 237
             + D  L KK
Sbjct: 186 EAKSDVRLGKK 196


>gi|332020707|gb|EGI61112.1| Farnesyl pyrophosphate synthetase [Acromyrmex echinatior]
          Length = 354

 Score = 85.6 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 79/245 (32%), Gaps = 21/245 (8%)

Query: 10  QENSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           +E S+++  +  D++      ++          +   ++Y +  GKK R   +     L 
Sbjct: 12  KEESQQLMAVWPDVIRDIKEAIENCNIPDVAKWMEKVLQYNVPHGKKNRGLGLVYAYKLL 71

Query: 66  -------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                    N   A  +   +E +  Y  I DD+   D    RRG+   +   D   A I
Sbjct: 72  VPSDQLTEENIRLARILAWCVELMQAYFSIMDDIE--DQSLFRRGQLCWYRYDDLGLAAI 129

Query: 119 AGNGLLTYA-FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET-- 175
             + +L  + F +I          ++   +   T      G     +        +    
Sbjct: 130 NDSFMLQGSIFYLIQKHFKGKDCYVKLLEIFQDTIMKAAMGQSLDLLSTNFGNRPNLDLF 189

Query: 176 ---QVFMIQKMKTGALMCFACESGAI-MAH-ASQNEKERLRCFGENLGIIFQLADDLLDC 230
              Q   I + KT           A+ +A    Q            +G +FQ+ DD LDC
Sbjct: 190 TMNQYNSIIEFKTAYYSTCLPVIVAMHLAGIKDQEMFREATTILTEIGCLFQIQDDYLDC 249

Query: 231 EEDLP 235
             D  
Sbjct: 250 YGDFE 254


>gi|224010173|ref|XP_002294044.1| probable farnesyl pyrophosphate synthetase [Thalassiosira
           pseudonana CCMP1335]
 gi|220970061|gb|EED88399.1| probable farnesyl pyrophosphate synthetase [Thalassiosira
           pseudonana CCMP1335]
          Length = 360

 Score = 85.6 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 65/212 (30%), Gaps = 26/212 (12%)

Query: 45  YALLGGKKIRSFLVTECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           Y + GGK  R   V +   +          +  A  +G  +E +  + L+ DD+  MD  
Sbjct: 48  YTVPGGKMTRGLTVIKGVEVLKGRILTEVEYKHAAILGWQVEWLQAFFLVADDI--MDGS 105

Query: 99  YIRRGKPTVHIQYD--EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
             RRG P  + Q +  +  AI     L    ++ +          ++   +   T     
Sbjct: 106 ITRRGNPCWYKQPNVTQDNAINDALILENMIYQTLRRHFKGHPSYVQILELFIDTTYQTE 165

Query: 157 QGM---------LGGQMLDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIMAHASQNE 206
            G            G+  ++        +     + KT       +C             
Sbjct: 166 IGQHIDTNGTPYADGKRAELDLTRFTLDRYQGCVRYKTCYYSFYLSCALALAYCGYDPES 225

Query: 207 KERLRCFGEN------LGIIFQLADDLLDCEE 232
            E    +         LG  FQ+ DD+LD   
Sbjct: 226 GEGKELYANAEDVCMRLGEYFQIQDDVLDAFA 257


>gi|310792468|gb|EFQ27995.1| polyprenyl synthetase [Glomerella graminicola M1.001]
          Length = 377

 Score = 85.6 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 71/201 (35%), Gaps = 21/201 (10%)

Query: 48  LGGKKIRSFLV------TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           LGGK  R   V           L    +  A  +G   E +  + L+ DD+  MD    R
Sbjct: 77  LGGKCNRGMSVPDSVSYLLGKPLNEEEYFQAATLGWMTELLQAFFLVSDDI--MDTSITR 134

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RGKP  +         I    +L  A   +   +   +++     +L L H +  Q  L 
Sbjct: 135 RGKPCWYRHEGVGMVAINDAFMLEAAIYTL--LRKFFREHASYVDLLELFHEVTFQTEL- 191

Query: 162 GQMLD--------IQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLR 211
           GQ+ D        +  +     +   I   KT     +   + A+  +  A+    ++  
Sbjct: 192 GQLCDLLTAPEDKVNLDNFSMEKYSFIVIYKTAYYSFYLPVALALHCLNIATPKNLKQAE 251

Query: 212 CFGENLGIIFQLADDLLDCEE 232
                LG  FQ+ DD LD   
Sbjct: 252 DILIPLGEYFQIQDDYLDNFG 272


>gi|317036431|ref|XP_001397340.2| geranylgeranyl pyrophosphate synthase [Aspergillus niger CBS
           513.88]
          Length = 696

 Score = 85.2 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 10/215 (4%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           LDD   +      T   + LL+   Y A L  K +R   +        +       + + 
Sbjct: 386 LDD--REKERDRVTLGTEHLLAPAEYIASLPSKGVREAFIDALNVWLALPDRFVSVMKSI 443

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            + +H  SL+ DD+   D   +RRG+P  H  + +   I + N +L  A + +      L
Sbjct: 444 AKTLHNASLMLDDIE--DGSPLRRGQPATHTVFGQALTINSANFVLIQAMDQVR----LL 497

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
           +D+    + +  T N+ + G         QDE   E +   + + KTG L          
Sbjct: 498 EDSRCLDIFVEETRNLFI-GQSFDLYWTRQDECPSEEEYLEMIRQKTGGLFRLLARLMMQ 556

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A + +N    L    + +G  FQ+ DD  +  E+
Sbjct: 557 KATSKKNRCLPLEPLVDLMGEYFQIRDDYKNLAEE 591


>gi|281181748|dbj|BAI58053.1| geranylgeranyl diphosphate synthase [Metarhizium anisopliae]
          Length = 359

 Score = 85.2 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 22/196 (11%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK  RS L+    +L  V       +  A+  +H  SL+ DD+   D+  +RRG P  H
Sbjct: 73  PGKDFRSQLINAFNALLQVPPSRLDIITKAVGMLHESSLLVDDVQ--DSSELRRGFPVAH 130

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A + +         ++ +  ++SL    G+        L  +
Sbjct: 131 NIFGVPQTINSANYIYFVALQELQKLGNPSNISVFADELVSLHRGQGM-------DLFWR 183

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAI--------MAHASQNEKERLRCFGENLG 218
           D      E +   +   KTG L     +             + +   +   L      +G
Sbjct: 184 DTLTCPTEEEYLEMVGNKTGGLFRLGIKLMQAESSVSSVSGSSSPPLDCVPLVNL---VG 240

Query: 219 IIFQLADDLLDCEEDL 234
           +IFQ+ DD ++ + D 
Sbjct: 241 LIFQIRDDYVNLKSDE 256


>gi|115399985|ref|XP_001215581.1| hypothetical protein ATEG_06403 [Aspergillus terreus NIH2624]
 gi|114191247|gb|EAU32947.1| hypothetical protein ATEG_06403 [Aspergillus terreus NIH2624]
          Length = 342

 Score = 85.2 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 92/237 (38%), Gaps = 16/237 (6%)

Query: 11  ENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTEC-ASLFNV 67
           EN K +  +L + + +  S     +   DRL   +      GK  R   V +   +L   
Sbjct: 5   ENFKSVLEVLANEIQEDLSERKAPSAIRDRLQQCLLANTKDGKLNRGLTVVDTGCTLLQR 64

Query: 68  NHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGN 121
               A       +G  +E      L+ DD+  MDN   RRGK   + + +   TAI    
Sbjct: 65  PPTPAEFQDLSILGWMVEMFQASYLVSDDI--MDNSEYRRGKLCWYRRDEVGLTAINDAA 122

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVF 178
            L +  F ++        + +    +L+   +    G L    + ++   +D+       
Sbjct: 123 FLKSLMFSLLKKHFQHHAEYVGILELLNEASHRTELGQLSDADMAVKARGLDQMTVEAYS 182

Query: 179 MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            I + KT     +   + A+  +  A+++  ++++     +G  FQ+ DD LDC  D
Sbjct: 183 FIARNKTAFYSFYLPIALALHYLRLANESNLKQVKTIMLPMGEYFQVQDDYLDCFGD 239


>gi|323306067|gb|EGA59801.1| Coq1p [Saccharomyces cerevisiae FostersB]
          Length = 285

 Score = 85.2 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 11/102 (10%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNXAFTNKMAVLAGDFLLGRATVSISR 234

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
                   + S  +           ++ G+ + +++  ID  
Sbjct: 235 LHNPEVVELMSNSIA---------NLVEGEFMQLKNTSIDAD 267


>gi|328793605|ref|XP_623586.2| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
          Length = 359

 Score = 85.2 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 74/224 (33%), Gaps = 18/224 (8%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALRVG 76
           L +  +      N+     + Y +  G + RS  +     L          N  +A  + 
Sbjct: 33  LTENNNQELQDVNEWTAKVLEYNVPKGGRRRSISLIVAYKLLASQDQLTEENIHSARILA 92

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             +E +    ++ DD+  +D+  +RR +PT H++     A+     + T  +++      
Sbjct: 93  WCMEILQAVYIVMDDI--IDHTDMRRNQPTWHVKIGLS-AVNDVLLIETCIYDLFKKYFK 149

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD------EFIDETQVFMIQKMKT-GALM 189
                I    + S  H   +QG     ++          +     +   I K KT     
Sbjct: 150 SKDCYIDILNLFSKYHKKTVQGECLDVLISTDWGKKSNLDLFSMDRYNTIVKHKTSYYSF 209

Query: 190 CFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                     A        ++       +G +FQ+ DD LDC  
Sbjct: 210 VLPFVLAMRFAGITDPEIYKQAEKILLKIGHLFQVRDDYLDCYA 253


>gi|261329450|emb|CBH12431.1| farnesyl pyrophosphate synthase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 367

 Score = 85.2 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 76/250 (30%), Gaps = 42/250 (16%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------------- 65
           +L++L L+    M       L   +    LGGK  R   V + A                
Sbjct: 17  LLEELELKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDD 74

Query: 66  NVNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                  L         IE +  + L+ DD+  MDN   RRGKP  +            +
Sbjct: 75  GARRKRVLHDACVCGWMIEFLQAHYLVEDDI--MDNSVTRRGKPCWYRHPGVTVQCAIND 132

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------------------Q 163
           GLL  ++  + +      D    Q +L   + +     +G                   Q
Sbjct: 133 GLLLKSWTHMMAMHF-FADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQ 191

Query: 164 MLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERL-RCFGENLGIIF 221
                      +    I K KT           G I++ A       +       +G  F
Sbjct: 192 PTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYF 251

Query: 222 QLADDLLDCE 231
           Q+ DD++DC 
Sbjct: 252 QVQDDVMDCF 261


>gi|46109712|ref|XP_381914.1| hypothetical protein FG01738.1 [Gibberella zeae PH-1]
          Length = 757

 Score = 85.2 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 82/231 (35%), Gaps = 26/231 (11%)

Query: 20  LDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           L D++LQ    M+   +D ++   RY   L  K +R+  +        V    A  + A 
Sbjct: 444 LSDIMLQELPPME---DDVVMEPYRYLCSLPSKGVRNKTIDALNFWLKVPIENANTIKAI 500

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E +H  SL+ DD+   D+  +RRGKP+ H  + E   I +       +  +IS  ++  
Sbjct: 501 TESLHGSSLMLDDIE--DHSQLRRGKPSAHAVFGEAQTINSATFQYIQSVSLISQLRSPK 558

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
             NI    +  L      +      M+          +   +   KTG L        A 
Sbjct: 559 ALNIFVDEIRQLFIGQAYELQWTSNMICP-----PLEEYLRMVDGKTGGLFRLLTRLMA- 612

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADD-----LLDCEE--------DLPK 236
            A ++           +  G  FQ+ DD     L D  E        D  K
Sbjct: 613 -AESTTEVDVDFSRLCQLFGRYFQIRDDYANLKLADYTEQKGFCEDLDEGK 662


>gi|327311502|ref|YP_004338399.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947981|gb|AEA13087.1| Polyprenyl synthetase [Thermoproteus uzoniensis 768-20]
          Length = 258

 Score = 85.2 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 23/223 (10%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNH 69
           E    +   L  +        ++  N  L +AIRY +   GK IR  L+     + +   
Sbjct: 2   EIPPEVLDALGRVREDMGRIGESVQNPSLRAAIRYYIETPGKMIRPLLLLLFTYVLDPER 61

Query: 70  ---LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
                 +   A +E +H  SL+ DD+  +D    RRG  T    Y +  AI+A + L+  
Sbjct: 62  LKDERIINAAALLEVLHIVSLLQDDV--VDKHDARRGVETPRAIYGDGMAIVASDWLIAE 119

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A E   S        +              + +  GQ LDI+    +  ++      KT 
Sbjct: 120 AIERAVSISADAVKYL----------AGVAKRLAEGQALDIEGLRKEAAEL------KTA 163

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            L+  A     ++  + ++        G  LG+++Q +DD+ D
Sbjct: 164 PLIEAAFVMPTMIL-SRRDLLRPAAALGRLLGVLYQYSDDMAD 205


>gi|171693897|ref|XP_001911873.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946897|emb|CAP73701.1| unnamed protein product [Podospora anserina S mat+]
          Length = 349

 Score = 85.2 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 91/250 (36%), Gaps = 24/250 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLV 58
           M     + LQE  + +   L+++LL+ A    +  +       ++    +GGK  R   V
Sbjct: 1   MAAPQKTTLQEF-ESVFPKLEEVLLEHAKSYNLPEKELAWYKKSLEINAVGGKCNRGMSV 59

Query: 59  -----TECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
                      L    +  +  +G   E +  + L+ DD+  MD+   RRGKP  +    
Sbjct: 60  PDSVSLLLGRPLTEDEYFKSATLGWMTELLQAFFLVSDDI--MDSSITRRGKPCWYRHEG 117

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD------ 166
                I    +L  A   +   K   +D+ R   +L L H +  Q    GQ+ D      
Sbjct: 118 VGMVAINDAFMLEAAIYTL--LKKYFRDHPRYVDLLELFHEVTFQTE-MGQLCDLLTAPE 174

Query: 167 --IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQ 222
             +  +     +   I   KT     +   + +++    A+    ++       LG  FQ
Sbjct: 175 DVVNLDNFSMEKYRFIVIYKTAYYSFYLPVALSLLLLDIATPANLKQAESILIPLGEYFQ 234

Query: 223 LADDLLDCEE 232
           + DD LD   
Sbjct: 235 IQDDYLDNFG 244


>gi|58699102|ref|ZP_00373935.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534385|gb|EAL58551.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 120

 Score = 84.8 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
           GGQ LDI     D  ++  I  MKT  L   +CE GAI+  A+  ++  L  FG NLG+I
Sbjct: 1   GGQALDI---DTDFNKIKEIHLMKTAKLFAASCEIGAIIGGATDEQRRALYNFGINLGLI 57

Query: 221 FQLADDLLDCEED 233
           FQ  DD+ D E+D
Sbjct: 58  FQAKDDIEDYEQD 70


>gi|148654322|ref|YP_001274527.1| polyprenyl synthetase [Roseiflexus sp. RS-1]
 gi|148566432|gb|ABQ88577.1| Polyprenyl synthetase [Roseiflexus sp. RS-1]
          Length = 330

 Score = 84.8 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 8/169 (4%)

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
           ++R+ LV   A L   +    +   AA E IH  + +HD    ++    RRGKP     +
Sbjct: 62  RLRAALVMLAARLGRYDTRRVVHAAAAAELIHSATTVHD--SLINEAARRRGKPVGDQHW 119

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           +   A+++G+ LL  A   ++         + S+++++          +   +       
Sbjct: 120 NGDVALMSGDYLLALAAAEMALAPDARIIGMYSRVVMAFCEGKLAPVTVINPLDQA---- 175

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
               Q   + + +T AL+  A   G +         + L  FG  LG+ 
Sbjct: 176 --LAQHEFVAESRTAALLEAAARVGVVCGSGDDALGDLLGPFGRALGMA 222


>gi|39948036|ref|XP_363065.1| farnesyl pyrophosphate synthetase [Magnaporthe oryzae 70-15]
 gi|145010274|gb|EDJ94930.1| farnesyl pyrophosphate synthetase [Magnaporthe oryzae 70-15]
          Length = 348

 Score = 84.8 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 89/248 (35%), Gaps = 24/248 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHND--RLLSAIRYALLGGKKIRSFLV-- 58
               + LQE  + +   L+++LL+ A   +    +      ++    +GGK  R   V  
Sbjct: 2   AASKTTLQEF-EAVFPKLEEVLLEHAKSYKLPQGEMAWYKKSLETNAIGGKCNRGMSVPD 60

Query: 59  ----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
                    L    +  A  +G   E +  + L+ DD+  MD+   RRG+P  + Q    
Sbjct: 61  SVSALLERPLSEDEYFKAATLGWMTELLQAFFLVSDDI--MDSSITRRGQPCWYRQDGVG 118

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD-------- 166
              I    +L  A   +   K   +D+     +L L H +  Q  + GQ+ D        
Sbjct: 119 MVAINDAFMLEAAIYTL--LKKFFRDHPAYVDLLELFHEVTYQTEI-GQLCDLLTAPEDK 175

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLA 224
           +  +     +   I   KT     +   + A+  +   +    +        +G  FQ+ 
Sbjct: 176 VNLDNFSMEKYRFIVIYKTAYYSFYLPVALALHQLNIGTPENLKVAEDILIPMGEYFQVQ 235

Query: 225 DDLLDCEE 232
           DD LD   
Sbjct: 236 DDYLDNFG 243


>gi|157693593|ref|YP_001488055.1| hypothetical protein BPUM_2840 [Bacillus pumilus SAFR-032]
 gi|157682351|gb|ABV63495.1| hypothetical protein BPUM_2840 [Bacillus pumilus SAFR-032]
          Length = 307

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 21/175 (12%)

Query: 57  LVTECASLFNVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L  +    F      A+ ++ A IE +   + I DD+   D            ++     
Sbjct: 46  LAYKHYEAFGGQDKQAITQLAAGIELLILSADILDDIEDQDKDSYP------WMRCQSGV 99

Query: 116 AIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
           A+ A N L   +F + S     T+L +++ S  + S+           GQ LD+  E  +
Sbjct: 100 AMNAANVLFALSFGVFSKLDHATELINSVYSYSIQSM----------QGQHLDMTVEPEN 149

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           E     I ++K G+L    C  G I+A  S    +++  +   LG+  QL +D L
Sbjct: 150 EQDCLNIMRLKAGSLFVLPCMLGVILATGSFE--KKVEEYAYYLGMAEQLENDYL 202


>gi|298709043|emb|CBJ30993.1| Geranylgeranyl pyrophosphate synthetase, chloroplast precursor
           [Ectocarpus siliculosus]
          Length = 142

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 45/76 (59%)

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             M     L+ +D+ +   ++  I + KTGAL+  AC +GA++  AS  + + +  F E+
Sbjct: 1   MKMNQVMDLECEDKDVGLEELRWIHRHKTGALLKVACTAGALLGGASDKDVKNMEVFSES 60

Query: 217 LGIIFQLADDLLDCEE 232
           +G+ FQ+ADD+LDC  
Sbjct: 61  IGLAFQVADDILDCTA 76


>gi|46124813|ref|XP_386960.1| FPPS_GIBFU Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)
           (Farnesyl diphosphate synthetase) [Gibberella zeae PH-1]
          Length = 347

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 86/231 (37%), Gaps = 23/231 (9%)

Query: 20  LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------NVNHLT 71
           L+++LL  A    +  +  D    ++    LGGK  R   V +  SL          +  
Sbjct: 17  LEEVLLDHARSYKLPQEQLDWYKKSLEANPLGGKCNRGMSVPDSVSLLLEKPLTEEQYFQ 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           A  +G   E +  + L+ DD+  MD+   RRG+P  + Q       I    +L  A   +
Sbjct: 77  AATLGWMTELLQAFFLVSDDI--MDSSITRRGQPCWYRQEGVGMIAINDAFMLEMAIYTL 134

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--------IQDEFIDETQVFMIQKM 183
              K   + +     ++ L H    Q  L GQ+ D        +  +     +   I   
Sbjct: 135 --LKKYFRTHPAYVDLIELFHETTFQTEL-GQLCDLLTAPEDNVNLDNFSLEKYSFIVIY 191

Query: 184 KTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT     +   + A+  +  A+ +  ++       LG  FQ+ DD LD   
Sbjct: 192 KTAYYSFYLPVALALHQLNLATPSNLKQAEDILIPLGEYFQIQDDYLDNFG 242


>gi|149247108|ref|XP_001527979.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447933|gb|EDK42321.1| hexaprenyl pyrophosphate synthetase, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 504

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 11/118 (9%)

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
            N       R+   +E IH  SL+HDD+  +D    RRG+P+ ++ +    A++AG+ LL
Sbjct: 177 LNGILPKQRRLAEIVEMIHTASLLHDDV--IDLSDSRRGRPSGNVAFTNKMAVLAGDFLL 234

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
             A   I+  +      + S  +           ++ G+ + +++  +   +   +  
Sbjct: 235 GRASVAIARLRNPEVIELLSTTIA---------NLVEGEFMQLKNTVMSSKEELNMIN 283



 Score = 81.7 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   +KT +LM  +C + A+++ A  +  E    FG NLG+ FQ+ DD+LD   
Sbjct: 346 EYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTS 403


>gi|205363969|gb|ACI04497.1| CrtE [uncultured bacterium]
          Length = 351

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 12/190 (6%)

Query: 44  RYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
            +    GK+ R+ L     +L          +   +E +H  SLI DD+   D    RRG
Sbjct: 53  EFLQRPGKEFRAELTRIFFALGGRKEPPPENLALIVEVLHAGSLIVDDIQ--DESEERRG 110

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            P +H  +    A+ AGN L  +A+ ++       +  +R+  +++      L     GQ
Sbjct: 111 GPALHQIHGVPLALNAGNWLYFWAYALLGEIDLPDEAAVRAHRLVTRA----LLDCHAGQ 166

Query: 164 MLDIQDEFIDETQVFMIQK------MKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
            LD+     D  Q  +         +KTG+L+  A   GA++  A+ +       FG++L
Sbjct: 167 GLDLSVRMSDVAQAAVPAVVRASTLLKTGSLLGLAAGLGALVGGATADAIAASARFGQDL 226

Query: 218 GIIFQLADDL 227
           G   Q+ DDL
Sbjct: 227 GTGLQMLDDL 236


>gi|294898818|ref|XP_002776390.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239883328|gb|EER08206.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 365

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 71/209 (33%), Gaps = 22/209 (10%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI----ECIHCYSLIHDDLPSMDNG 98
           + Y  LGGK  R             ++   ++  AAI    E +    L+ DD+  MD  
Sbjct: 87  MNYNCLGGKMTRGLTTVATYVALCGDYREHVKDAAAIGWSAEFLQASFLMFDDV--MDQS 144

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTY-AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             RRG    +   +        + +    A   +    T    +I+  ++    H+I L+
Sbjct: 145 ETRRGSTCWYRLPEISMPNSLNDVVFIENAVYTLLIESTGFDADIKLAIIRLC-HDITLR 203

Query: 158 GMLGGQMLDIQDEFIDE----------TQVFMIQKMKTGAL-MCFACESGAIMA--HASQ 204
            ++ GQ LD+     D+           + +     KT           G  MA      
Sbjct: 204 TII-GQHLDLNSVRPDDYTVDLSRYTMERYWATTAYKTAYYSFWLPVALGMAMARFSLDD 262

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
            + +  +     LG  FQ  DD LD   D
Sbjct: 263 PDYKGTKDACILLGNFFQAQDDFLDVFGD 291


>gi|147677775|ref|YP_001211990.1| hypothetical protein PTH_1440 [Pelotomaculum thermopropionicum SI]
 gi|146273872|dbj|BAF59621.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 256

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 10/171 (5%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K +R  LV   + ++ +       + +  + IH  S +H  +   D+   R  K   +  
Sbjct: 44  KTVRPALVILSSRIYGLARQKTALLASVFQFIHMASKVHQGISENDSNLARVRKDPRNAS 103

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
                 ++ G+ L    F ++            ++++  +     L+  L G+  +    
Sbjct: 104 Q---FPVLVGDYLYGKFFTLLCDAGMTGLLQPLAEIICQIHEGSILKKKLDGKSQNSH-- 158

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                + +   + +T  L    C  GA MA A   +++ L+ FG +LG+++
Sbjct: 159 -----EFYEAVRKETAELFAGCCTLGARMAGAPDKDQDLLKQFGRSLGMVY 204


>gi|72391330|ref|XP_845959.1| farnesyl pyrophosphate synthase [Trypanosoma brucei TREU927]
 gi|62175946|gb|AAX70070.1| farnesyl pyrophosphate synthase [Trypanosoma brucei]
 gi|70802495|gb|AAZ12400.1| farnesyl pyrophosphate synthase [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 367

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 76/250 (30%), Gaps = 42/250 (16%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------------- 65
           +L++L L+    M       L   +    LGGK  R   V + A                
Sbjct: 17  LLEELKLKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEKDD 74

Query: 66  NVNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                  L         IE +  + L+ DD+  MDN   RRGKP  +            +
Sbjct: 75  GARRKRVLHDACVCGWMIEFLQAHYLVEDDI--MDNSVTRRGKPCWYRHPGVTVQCAIND 132

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------------------Q 163
           GLL  ++  + +      D    Q +L   + +     +G                   Q
Sbjct: 133 GLLLKSWTHMMAMHF-FADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQ 191

Query: 164 MLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERL-RCFGENLGIIF 221
                      +    I K KT           G I++ A       +       +G  F
Sbjct: 192 PTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYF 251

Query: 222 QLADDLLDCE 231
           Q+ DD++DC 
Sbjct: 252 QVQDDVMDCF 261


>gi|312861915|gb|ADR10437.1| farnesyl pyrophosphate synthase [Withania somnifera]
          Length = 343

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 83/234 (35%), Gaps = 23/234 (9%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-------TALR 74
           +LL              +   + Y + GGK  R   V +  SL N            A  
Sbjct: 18  ELLNDPDLEFTDDSRQWVDKMLDYNVPGGKLNRGLSVIDSYSLLNDVKELTSEEIFQASA 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MDN + R        +  ++  I   +G+L +   I    
Sbjct: 78  LGWCIEWLQAYFLVLDDI--MDNSHTRPRSTNAGTKLQKIGMIAVNDGILLHN-HIPKIL 134

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   +       +L L           GQM+D+    + +  +          I + KT 
Sbjct: 135 KNHFRPKPYYVDLLDLFPEEE-FQTASGQMIDLITTLVGKKDLSKYSLPIHRRIVQYKTA 193

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                       +MA  + +    ++    ++GI FQ+ DD LDC  D   L K
Sbjct: 194 YYSFYLPGACALLMAGENLDNHVDVKHILIDMGIYFQVQDDYLDCFADPKVLGK 247


>gi|183233717|ref|XP_001913900.1| bifunctional short chain isoprenyl diphosphate synthase [Entamoeba
           histolytica HM-1:IMSS]
 gi|169801440|gb|EDS89325.1| bifunctional short chain isoprenyl diphosphate synthase, putative
           [Entamoeba histolytica HM-1:IMSS]
          Length = 326

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 83/244 (34%), Gaps = 48/244 (19%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQ-TQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFN 66
           +++    ++  L ++  +        Q     +  +   ++G GK++R   +        
Sbjct: 1   MEQLVLLVEEKLKEIFEEERKRSTCHQFQAECIDIMEKFVMGPGKRLRPLSLLLFFIGGG 60

Query: 67  V---NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV---------------- 107
                    +R   A+E +H  +L HDD+  MD   +RR  PT+                
Sbjct: 61  GKIEEQKNIIRTACAMELLHDSTLAHDDI--MDEDEMRRNAPTIVKTFYDKYIERNKEDV 118

Query: 108 ----------HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                        Y    AI+ GN L + A  +     T +     ++++L L       
Sbjct: 119 KTEKFLFMSRGTTYASSLAIMTGNILYSMAQRLCLESGTNI-----AEMVLELFSV---- 169

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE----RLRCF 213
            +  GQ+LD+        +  +   MKT          G  +A     + +    +LR  
Sbjct: 170 -LNYGQILDMSGLN-TVEEYNLNIIMKTAIFFKTTASIGLTLAEDDLLDIDPLNGKLRKM 227

Query: 214 GENL 217
           G ++
Sbjct: 228 GNDI 231


>gi|254410383|ref|ZP_05024162.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
           7420]
 gi|196182589|gb|EDX77574.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
           7420]
          Length = 324

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 10/182 (5%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           + L     +    N   A+ V AA   +     I DDL   D          +       
Sbjct: 55  AILPLASCAAVGGNPQEAIPVSAAWVVLSLAMRILDDLQDQDRPD------ALWATIGLA 108

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            +      L     E+++      +     +++       GL  +L GQ  D+++  +  
Sbjct: 109 RSFNFSAALYALCNELLAQAAWTPE---LYRVINQHFSQTGLH-LLKGQDRDLRNLTLTI 164

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
              +   + K  +    AC +G +    +    +  R FG +LG+  QL DD        
Sbjct: 165 EDYWHTIEEKNASAFVLACTAGGLCGPDNPKLLDACRRFGYHLGLALQLFDDFEGIWGQS 224

Query: 235 PK 236
            +
Sbjct: 225 GR 226


>gi|115675636|ref|XP_781061.2| PREDICTED: similar to geranylgeranyl diphosphate synthase1
           [Strongylocentrotus purpuratus]
 gi|115959556|ref|XP_001186881.1| PREDICTED: similar to geranylgeranyl diphosphate synthase1
           [Strongylocentrotus purpuratus]
          Length = 427

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 82/220 (37%), Gaps = 32/220 (14%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR---------- 74
           Q+A   + +    L+    Y L + GK++R+ L        ++      +          
Sbjct: 15  QSALIREKKQEMILMEPYNYILQVPGKQVRTKLSRAFNCWMDIPEDNIKKIRKLIYLFIF 74

Query: 75  -----VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                +   IE +H YS   DD+   D+  +RRG P  H  Y     I + N +     +
Sbjct: 75  EKLSILSTYIEVLH-YSYRIDDIE--DSSKLRRGIPVAHSIYGIAQTINSANYMYFLGLK 131

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGA 187
            +          I ++ ++ L    G+        +  +D +    E +   +   KTG 
Sbjct: 132 EVMQFDHPDAMKIFTEQLVLLHQGQGM-------DIYWRDSYTCPTEEEYKEMVIKKTGG 184

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           L   A     + + A++++ + L      LG+ FQ+ DD 
Sbjct: 185 LFGLAVRLMQLFS-ANKSDFKPLSDI---LGLYFQIRDDY 220


>gi|156082379|ref|XP_001608674.1| farnesyl pyrophosphate synthetase  [Babesia bovis T2Bo]
 gi|154795923|gb|EDO05106.1| farnesyl pyrophosphate synthetase , putative [Babesia bovis]
          Length = 336

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/253 (21%), Positives = 84/253 (33%), Gaps = 48/253 (18%)

Query: 2   NGGLPSKLQENSKRI-DTILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVT 59
           N  L +   E   R   T LD  + + +++  +Q +    S AI+Y L GGK IR  LV 
Sbjct: 9   NDELFALCNERLIRFMPTFLDIAIAEISTYDVSQDDIAYYSHAIQYNLQGGKLIRGTLVV 68

Query: 60  ECASLFNVNH--------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
                   ++           L +G  +E +    L+ DD+  MD   +RR         
Sbjct: 69  ATTRCILGDNISEYQWKLALILGMGWCVELLQTAFLVADDI--MDKSVMRRSNLCW---- 122

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
                                    Q K N R   + ++   I +  +LG  M       
Sbjct: 123 ---------------------IIANQFKGNDRLISIFNIFTRISMVTILGQHMDTYNTMD 161

Query: 172 IDETQ--------VFMIQKMKTG-ALMCFACESGAIMAHASQNEK--ERLRCFGENLGII 220
           I             + I K KT           G  ++   ++     +L      LG +
Sbjct: 162 ISLLDNPTAATALYYRICKNKTAYYTFFLPISLGMFISEIDEHNINYRKLESVSSLLGHL 221

Query: 221 FQLADDLLDCEED 233
           FQ  DD LDC  D
Sbjct: 222 FQAQDDYLDCYSD 234


>gi|145613371|ref|XP_363775.2| hypothetical protein MGG_01701 [Magnaporthe oryzae 70-15]
 gi|145020455|gb|EDK04584.1| hypothetical protein MGG_01701 [Magnaporthe oryzae 70-15]
          Length = 702

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/205 (23%), Positives = 75/205 (36%), Gaps = 44/205 (21%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           + + IRY   +  K  R+ LV       +V       +   I C+H  SL+ DD+   D+
Sbjct: 421 ISAPIRYIQSMPSKGFRAALVDCYNMWLDVPQREMEIIKTVINCLHDSSLLLDDIE--DD 478

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H+ Y     I +   L   A                              
Sbjct: 479 SKLRRGFPATHLVYGPAATINSATYLYVQA------------------------------ 508

Query: 158 GMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHASQNE------K 207
            +  GQ LD+   F  E    TQ F + + KTGA +    E   +++ AS  E      +
Sbjct: 509 -LFFGQSLDLHWTFNRECPTKTQYFNMIEQKTGAFLSLVAELMMVVSAASDYESSTDSPE 567

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
              + F    G+ FQ+ DD L+   
Sbjct: 568 NIFQTFSYQSGLYFQVRDDYLNITS 592


>gi|78191047|gb|ABB29848.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 234

 Score = 84.1 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 17/178 (9%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  IE +  Y L+ DD+  MDN + RRG+P  +        I   +G+L     I
Sbjct: 1   KASALGWRIEWLQAYFLVLDDI--MDNSHTRRGQPCWYKLPKVGM-IAVNDGILLRN-HI 56

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK 182
               K   +       +L L + +       GQM+D+    + E  +          I +
Sbjct: 57  TRILKNHFRAKPYYVDLLDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLPTHRRIVQ 115

Query: 183 MKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            KT             +MA  + ++   ++     +GI FQ+ DD LDC  D   L K
Sbjct: 116 YKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK 173


>gi|328768663|gb|EGF78709.1| hypothetical protein BATDEDRAFT_17386 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 365

 Score = 84.1 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 83/232 (35%), Gaps = 20/232 (8%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLV------TECASLFNVNH 69
           D I  DLL   A +   ++  + +  +  A + GGK  R   V           L     
Sbjct: 34  DVISKDLLDGLALYRLPENGKQWIRNMLDATVPGGKMNRGLTVPSALESILKRELTADEL 93

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
             +  +G  IE +  + LI DD+  MD    RRG+P  + + +     I  + ++  A  
Sbjct: 94  FQSQVLGWCIEFLQAFFLISDDI--MDGSLTRRGQPCWYKKENVGMVAINDSFIVEAAIY 151

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-------DIQDEFIDETQVFMIQK 182
            +   K   K +      L L H +  Q  LG  M        D+  +     +   I +
Sbjct: 152 QM--LKKYFKTHPAYGDFLELFHEVTYQTELGQLMDLITAPEGDVDLDRFSIEKHAYIVE 209

Query: 183 MKTGAL-MCFACESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
            KT              +A  ++     + R     LG  FQ+ DD LDC  
Sbjct: 210 FKTAYYSFYLPIALAMRLAGITEERAYIQARDVLLPLGEYFQVQDDYLDCYG 261


>gi|207347806|gb|EDZ73868.1| YBR003Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 256

 Score = 84.1 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
           R+   +E IH  SL+HDD+  +D+   RRG+P+ +  +    A++AG+ LL  A   IS 
Sbjct: 177 RLAEIVEMIHTASLLHDDV--IDHSDTRRGRPSGNTAFTNKMAVLAGDFLLGRATVSISR 234

Query: 134 PKTQLKDNIRSQLML 148
                   + S  + 
Sbjct: 235 LHNPEVVELMSNSIA 249


>gi|30522953|gb|AAO17735.1| farnesyl pyrophosphate synthase [Trypanosoma brucei]
          Length = 367

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 77/250 (30%), Gaps = 42/250 (16%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------------- 65
           +L++L L+    M       L   +    LGGK  R   V + A                
Sbjct: 17  LLEELELKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDD 74

Query: 66  NVNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                  L         IE +  + L+ DD+  MDN   RRGKP  +   D        +
Sbjct: 75  GARRKRVLHDACVCGWMIEFLQAHYLVEDDI--MDNSVTRRGKPCWYRHPDVTVQCAIND 132

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------------------Q 163
           GLL  ++  + +      D    Q +L   + +     +G                   Q
Sbjct: 133 GLLLKSWTHMMAMHF-FADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQ 191

Query: 164 MLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERL-RCFGENLGIIF 221
                      +    I K KT           G I++ A       +       +G  F
Sbjct: 192 PTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYF 251

Query: 222 QLADDLLDCE 231
           Q+ DD++DC 
Sbjct: 252 QVQDDVMDCF 261


>gi|118137651|pdb|2EWG|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Minodronate
 gi|118137652|pdb|2EWG|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Minodronate
 gi|118138036|pdb|2I19|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate
 gi|118138037|pdb|2I19|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate
 gi|158429227|pdb|2OGD|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-527
 gi|158429228|pdb|2OGD|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-527
 gi|169404558|pdb|2P1C|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-210
 gi|169404559|pdb|2P1C|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-210
 gi|229597759|pdb|3DYF|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-461 And Isopentyl Diphosphate
 gi|229597760|pdb|3DYF|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-461 And Isopentyl Diphosphate
 gi|229597761|pdb|3DYG|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-461
 gi|229597762|pdb|3DYG|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-461
 gi|229597763|pdb|3DYH|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-721
 gi|229597764|pdb|3DYH|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-721
 gi|229597838|pdb|3EFQ|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-714
 gi|229597839|pdb|3EFQ|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-714
          Length = 390

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 77/250 (30%), Gaps = 42/250 (16%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------------- 65
           +L++L L+    M       L   +    LGGK  R   V + A                
Sbjct: 40  LLEELELKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDD 97

Query: 66  NVNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                  L         IE +  + L+ DD+  MDN   RRGKP  +   D        +
Sbjct: 98  GARRKRVLHDACVCGWMIEFLQAHYLVEDDI--MDNSVTRRGKPCWYRHPDVTVQCAIND 155

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------------------Q 163
           GLL  ++  + +      D    Q +L   + +     +G                   Q
Sbjct: 156 GLLLKSWTHMMAMHF-FADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQ 214

Query: 164 MLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERL-RCFGENLGIIF 221
                      +    I K KT           G I++ A       +       +G  F
Sbjct: 215 PTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYF 274

Query: 222 QLADDLLDCE 231
           Q+ DD++DC 
Sbjct: 275 QVQDDVMDCF 284


>gi|241955823|ref|XP_002420632.1| geranylgeranyl diphosphate synthase, putative; geranylgeranyl
           pyrophosphate synthetase, putative; [includes:
           dimethylallyltranstransferase (ec 2.5.1.1)
           geranyltranstransferase (ec 2.5.1.10);
           farnesyltranstransferas (ec 2.5.1.29)] [Candida
           dubliniensis CD36]
 gi|223643974|emb|CAX41714.1| geranylgeranyl diphosphate synthase, putative [Candida dubliniensis
           CD36]
          Length = 332

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 19/174 (10%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +     ++   I   H  SL+ DD+   D+   RRG P  H++Y   + +  GN +   A
Sbjct: 57  DESLLTKISEIISVFHNSSLLIDDIE--DDSKYRRGVPVAHVKYGIPSTLNCGNLMYFVA 114

Query: 128 F---EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--------DETQ 176
               + +S P   ++   +S  +L       L  +  GQ LDI             D  +
Sbjct: 115 LQQAQQLSGPHGSMEIKFKSSQILID----ELLNLHRGQGLDIYWRDYLKKLEKLPDVEE 170

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              + K KTG L   A +  ++ +   +N++  L      +GI++Q+ DD L+ 
Sbjct: 171 YLEMIKDKTGGLFRLAIKLLSLYSDIKENDQ--LISLANLMGILYQVRDDYLNL 222


>gi|308505412|ref|XP_003114889.1| CRE-FDPS-1 protein [Caenorhabditis remanei]
 gi|308259071|gb|EFP03024.1| CRE-FDPS-1 protein [Caenorhabditis remanei]
          Length = 351

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 76/245 (31%), Gaps = 28/245 (11%)

Query: 11  ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-------------ALLGGKKIRSFL 57
            + K ++  L ++  +    +  +        + Y              ++GGK  R+ L
Sbjct: 3   ASRKLVEKALGEVKKKFVGVVSAKLP---ADGMEYDLVQYRCRNLFDNTVIGGKYSRASL 59

Query: 58  VTECASLFNV-------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
             +                       A +E I  + LI DD+  MDN   RRGK     +
Sbjct: 60  CVDTIRALQPHLRDETQELQAVCEAAATLEIIQSFYLIADDI--MDNSETRRGKQCWFRR 117

Query: 111 YDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 AI     + ++  +I+        +  R       +    L G         Q 
Sbjct: 118 EGVGMSAINDAFIMDSFVEDILRLALPGHVNLDRLCEAYRKSKQKTLIGQFLDTSSVNQI 177

Query: 170 EFIDETQVFMIQKMKTGALMCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                 +  ++ + KT     F   +   I++         ++     +G +FQ  DD L
Sbjct: 178 ASFTWDRYELMVENKTSHYTVFHPLQMALIISDV-LAYHGAVKKAAYQIGFLFQSQDDFL 236

Query: 229 DCEED 233
           D   D
Sbjct: 237 DVYGD 241


>gi|229597840|pdb|3EGT|A Chain A, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-722
 gi|229597841|pdb|3EGT|B Chain B, T. Brucei Farnesyl Diphosphate Synthase Complexed With
           Bisphosphonate Bph-722
          Length = 413

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 77/250 (30%), Gaps = 42/250 (16%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------------- 65
           +L++L L+    M       L   +    LGGK  R   V + A                
Sbjct: 63  LLEELELKFD--MDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLSLSPNNNGEEDD 120

Query: 66  NVNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
                  L         IE +  + L+ DD+  MDN   RRGKP  +   D        +
Sbjct: 121 GARRKRVLHDACVCGWMIEFLQAHYLVEDDI--MDNSVTRRGKPCWYRHPDVTVQCAIND 178

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG------------------Q 163
           GLL  ++  + +      D    Q +L   + +     +G                   Q
Sbjct: 179 GLLLKSWTHMMAMHF-FADRPFLQDLLCRFNRVDYTTAVGQLYDVTSMFDSNKLDPDVSQ 237

Query: 164 MLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERL-RCFGENLGIIF 221
                      +    I K KT           G I++ A       +       +G  F
Sbjct: 238 PTTTDFAEFTLSNYKRIVKYKTAYYTYLLPLVMGLIVSEALPTVDMGVTEELAMLMGEYF 297

Query: 222 QLADDLLDCE 231
           Q+ DD++DC 
Sbjct: 298 QVQDDVMDCF 307


>gi|255945615|ref|XP_002563575.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588310|emb|CAP86415.1| Pc20g10860 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 732

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 74/201 (36%), Gaps = 17/201 (8%)

Query: 32  QTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           QTQ    +L+   Y   L  K +R  L+    S + V   + L +  A+  +H  SL+ D
Sbjct: 382 QTQQQRPVLNPYTYINSLPSKNVRQTLIAALNSWYKVPVKSLLIIEGAVNFLHNSSLLLD 441

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   D  ++RRG+P  H  +     I     L+  A  +I               +   
Sbjct: 442 DIQ--DGSFLRRGRPVAHQIFGVGQTINTATYLMNEALYLIQMLSPSA--------VSVY 491

Query: 151 THNIGLQGMLGGQMLD----IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           T    ++ +  GQ  D             Q   +   KTG L         + + A++N 
Sbjct: 492 TEIDEMRNLQLGQGRDLYWSYHTHVPTPAQYISMVDGKTGGLFRLISRL--MRSEATKNS 549

Query: 207 KERLRCFGENLGIIFQLADDL 227
              +  F   LG  FQ+ DD 
Sbjct: 550 DLDISQFATLLGRHFQIRDDY 570


>gi|19074981|ref|NP_586487.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|19069706|emb|CAD26091.1| FARNESYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 292

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 29/227 (12%)

Query: 16  IDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL-TALR 74
           I  I+   +LQ +S         LL    Y L GGK++R           N       L 
Sbjct: 2   IKEIVKSRILQMSSEYSKPEVLFLLD---YNLGGGKELRYKAYVHVLKALNGEVSMENLI 58

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G ++E +    LI DD+  MDN  IRRGKP  +++    T        +  AF ++ + 
Sbjct: 59  MGYSVELLQAVLLIVDDI--MDNSKIRRGKPCYYLKRGMKT--------VKDAFFLLGAI 108

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCF 191
           +  L + ++        ++  +     GQ  D   +   E        I + KTGA   +
Sbjct: 109 RKLLSEKMK------KPYSDSVFKTCLGQTHDTIRKTRSEYSLETYVAIAESKTGAYTFY 162

Query: 192 ACESGAIMAHASQNEKERLRCFGENLG-IIFQLADDLLDCEEDLPKK 237
                  +A A++ E   L  F  NLG +IFQ+ DD L+    LP+K
Sbjct: 163 LPAVLGYVA-ANKAEPACLWDF-CNLGALIFQMQDDYLNF---LPEK 204


>gi|320591510|gb|EFX03949.1| geranylgeranyl pyrophosphate synthetase [Grosmannia clavigera
           kw1407]
          Length = 328

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 79/208 (37%), Gaps = 14/208 (6%)

Query: 28  ASHMQTQHNDRLLSAIRYALLG--GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
           A    T+  +R++      L G  GK+ R+ ++        V   +   +   +  +H  
Sbjct: 29  ARRTWTREKERIIRGPYEYLNGVRGKEFRTQIINAFDGWLEVPVDSLAVITRVVGMLHTA 88

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRS 144
           SL+ DD+   D+  +RRG P  H  +    AI + N +   A + +   ++  +   I S
Sbjct: 89  SLLVDDVE--DSSSLRRGLPVAHNIFGVPQAINSANYMYFVALQEVQKLRSHQRALAIFS 146

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
           + ++SL    G+       +         E     +   KTG L     +     +  S 
Sbjct: 147 EELVSLHRGQGMDLFWRDTLTCP-----TEDDYLEMVANKTGGLFRLGIKLMQAESR-SL 200

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
            +   L      LG+IFQ+ DD  +   
Sbjct: 201 VDCVPLVNI---LGLIFQIQDDYRNLVA 225


>gi|302909459|ref|XP_003050078.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731015|gb|EEU44365.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 347

 Score = 83.3 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 85/234 (36%), Gaps = 29/234 (12%)

Query: 20  LDDLLLQTASH--MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------NVNHLT 71
           L++ LL+ A    +  +  D    ++    LGGK  R   V +  SL          +  
Sbjct: 17  LEEALLEHARSYKLPQEQLDWYKRSLEINPLGGKCNRGMSVPDSVSLLLEKPLSEEQYFQ 76

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           +  +G   E +  + L+ DD+  MD+   RRG+P  + Q         G   +  AF + 
Sbjct: 77  SATLGWMTELLQAFFLVSDDI--MDSSITRRGQPCWYRQEG------VGMIAINDAFMLE 128

Query: 132 SSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLD--------IQDEFIDETQVFMI 180
           ++  T LK   RS      L    +        GQ+ D        +  +     +   I
Sbjct: 129 AAIYTLLKKYFRSHPAYVDLIELFHETTFQTELGQLCDLLTAPEDKVDLDNFSMEKYSFI 188

Query: 181 QKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              KT     +   + A+  +  A+    ++       LG  FQ+ DD LD   
Sbjct: 189 VIYKTAYYSFYLPVALALHQLNLATPKNLKQAEDILIPLGEYFQIQDDYLDNFG 242


>gi|294955858|ref|XP_002788715.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239904256|gb|EER20511.1| farnesyl pyrophosphate synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 365

 Score = 83.3 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 70/209 (33%), Gaps = 22/209 (10%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAI----ECIHCYSLIHDDLPSMDNG 98
           + Y  LGGK  R             +    ++  AAI    E +    L+ DD+  MD  
Sbjct: 87  MNYNCLGGKMTRGLTTVATYVALCGDSCEHVKDAAAIGWSAEFLQASFLMFDDV--MDQS 144

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTY-AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             RRG    +   +        + +    A   +    T    +I+  ++    H+I L+
Sbjct: 145 ETRRGSTCWYRLPEISMPNSLNDVVFIENAVYTLLIESTGFDADIKLAIIRLC-HDITLR 203

Query: 158 GMLGGQMLDIQDEFIDE----------TQVFMIQKMKTGAL-MCFACESGAIMAH--ASQ 204
            ++ GQ LD+     D+           + +     KT           G  MA      
Sbjct: 204 TII-GQHLDLNSVRPDDYTVDLSRYTMERYWATTAYKTAYYSFWLPVALGMAMARFPLDD 262

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED 233
            + +  +     LG  FQ  DD LD   D
Sbjct: 263 PDYKGTKDACILLGNFFQAQDDFLDVFGD 291


>gi|89675427|gb|ABD77586.1| farnesyl diphosphate synthase [Vitis vinifera]
          Length = 176

 Score = 83.3 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 14/180 (7%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            L +     A  +G  IE +  Y L+ DD+  MDN + RRG+P           I A +G
Sbjct: 2   QLTDDEVCLACVLGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGM-IAANDG 58

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----- 177
           ++    +I    K   K       +L L + +       GQM+D+      E  +     
Sbjct: 59  VILRN-QIPRILKNHFKGKPYYVDLLDLFNEVE-FQTASGQMIDLITTIEGEKDLSKYSL 116

Query: 178 ---FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                I + KT             +MA  + +    ++     +GI FQ+ DD LDC  D
Sbjct: 117 PLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 176


>gi|134058744|emb|CAK38728.1| unnamed protein product [Aspergillus niger]
          Length = 401

 Score = 82.9 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 67/189 (35%), Gaps = 19/189 (10%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K IR  ++       N     A +V   I  +H  SL+ DD+   DN  +RRG+PT +  
Sbjct: 117 KNIRGTIIQALNLWLNAPESVATQVEDLIGHLHDSSLLLDDIQ--DNSELRRGRPTAYRV 174

Query: 111 YDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           +     I A    LT AFE +             D +R+  +          G       
Sbjct: 175 FGVAQTINAATHALTQAFEKVVPLMKPGTSHGFFDELRNLHV----------GQAMDLHW 224

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER--LRCFGENLGIIFQL 223
                         + ++KTGAL C A     I    S    ++  L     +LG  FQ 
Sbjct: 225 TRSGYRPSIADYLEMNRLKTGALFCLASNLLYIQGSFSAEAIKQTDLSDLMISLGQYFQA 284

Query: 224 ADDLLDCEE 232
            DD ++   
Sbjct: 285 RDDYINLAS 293


>gi|68072031|ref|XP_677929.1| farnesyl pyrophosphate synthase [Plasmodium berghei strain ANKA]
 gi|56498227|emb|CAI00471.1| farnesyl pyrophosphate synthase, putative [Plasmodium berghei]
          Length = 332

 Score = 82.9 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 72/224 (32%), Gaps = 36/224 (16%)

Query: 45  YALLGGKKIRSFLVTECASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           Y  LGGK  R  LV             N+    A  +   IE +    L+ DD+  MD G
Sbjct: 36  YNCLGGKNNRGILVILIYEYVKNRDINNLEWEKAACLAWCIEILQASFLVADDI--MDKG 93

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAF----------------EIISS--------- 133
             RR K   ++  D  T     + LL                    +II++         
Sbjct: 94  ETRRNKHCWYLLKDVETKNAVNDCLLLSNSIYKLIEIYLGNDTCYNDIIATFRDTVLKTI 153

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL-MCFA 192
               L  NI S     +  NI    +   + + I  E I+      +   KT        
Sbjct: 154 IGQHLDTNIFSNKYTDINKNIDTNNITIPEQVMINTEMINFDVYKNVVVHKTAYYSFFLP 213

Query: 193 CESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEEDL 234
              G  ++  S +    +++      +G  FQ  DD LD   D 
Sbjct: 214 IACGMQLSGISMDNLLYKKIEDISIMMGEYFQAHDDYLDIFGDF 257


>gi|218437764|ref|YP_002376093.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
 gi|218170492|gb|ACK69225.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
          Length = 341

 Score = 82.9 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSL-IHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           V         +    + + AA+      S+ I DDL   D          +H      +A
Sbjct: 45  VVAACKAVGGDPNQTIPLCAAL-LASAISIRILDDLQDQDKPN------ALHHVIGSASA 97

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           +   +   T AF+II     + K +      L      G   +L GQ  DIQ        
Sbjct: 98  LNYADTFKTLAFKIIGDLSLKNKAD---GSPLYQAFIDGYFTLLAGQERDIQGMSRTWED 154

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +   +MKTG     A   GA++    Q   +  + +G +LG+  Q+ +DL    + + K
Sbjct: 155 CWQTIEMKTGYSYAMATALGAMIGTNHQEWIQICKIYGYHLGLAIQIFNDLEGIWQPVGK 214


>gi|145251934|ref|XP_001397480.1| geranyltranstransferase [Aspergillus niger CBS 513.88]
 gi|134083021|emb|CAK42784.1| unnamed protein product [Aspergillus niger]
          Length = 349

 Score = 82.9 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 82/242 (33%), Gaps = 28/242 (11%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-------LLGGKKIRSF------LV 58
           +  + D +L +L+     H  +    +      Y           GK +R        L 
Sbjct: 6   DRSKFDGVLAELVADVLEHFASNGAPQ--EVKNYVEKCFYENSTNGKMLRGLSVPQTGLS 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AI 117
                +    +     +G  +E +  Y L HDD+  MDN   RRGKP  +        A+
Sbjct: 64  ILGRPVTEQEYHDLCVLGWLVELLQAYLLTHDDI--MDNSSTRRGKPCWYRLPSVGMKAV 121

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-----DIQDEFI 172
             G+ L +  F ++   K   + +     ++   H +     +G +           E  
Sbjct: 122 NDGSLLRSSIFFLL---KQHFQTHPAYLRIMETFHEVSFLCEIGQECDGIASEQRSIENW 178

Query: 173 DETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +   I  +K G    +   S A+  +   +    ++++     LG  +Q  +D LD 
Sbjct: 179 TMAEYEKICNLKAGYYTFYLSVSIALQYLQLDTPLNVQQIQDILIPLGSFYQSQNDYLDI 238

Query: 231 EE 232
             
Sbjct: 239 FG 240


>gi|299756412|ref|XP_001829313.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130]
 gi|298411665|gb|EAU92273.2| trans-hexaprenyltranstransferase [Coprinopsis cinerea okayama7#130]
          Length = 479

 Score = 82.9 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            T +R+   +E IH   L+H ++   D              +    +I+ G+ LL  A  
Sbjct: 221 PTQMRLAQIVEMIHVALLLHQNIS--DASKSPSSDS--QNPFGNKLSILGGDFLLGRAST 276

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNI--GLQGMLGGQMLDIQDEFIDETQ---VFMIQKMK 184
           ++S         + + ++ +L      G+  +    +  ++     E           +K
Sbjct: 277 VLSHLGGGEVVELIASVISNLVEGEFLGMDKVQTPGLGVMEGPRTREEAWDLYLRKTYLK 336

Query: 185 TGALMCFACESGAIMAHASQNEK--ERLRCFGENLGIIFQLADDLLDCEE 232
           + +LM     +  ++    +NE   E    +G +LGI +QL +D LD + 
Sbjct: 337 SASLMAKGARASVVLGGCGENEVWKEVAYAYGRSLGIAYQLIEDTLDYDA 386


>gi|241722226|ref|XP_002413673.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
 gi|215507489|gb|EEC16981.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
          Length = 182

 Score = 82.9 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q+   +DE    +        KT +L+ FAC+S +I+    +  +E    +G N+GI FQ
Sbjct: 12  QLGSKEDEGERFSHYIQKTFKKTASLIAFACKSVSILGGGDEKVQEAAYQYGRNVGIAFQ 71

Query: 223 LADDLLDC---EEDLPK 236
           L DDLLD    + DL K
Sbjct: 72  LVDDLLDFVSSQSDLGK 88


>gi|239943138|ref|ZP_04695075.1| polyprenyl synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239989596|ref|ZP_04710260.1| polyprenyl synthetase [Streptomyces roseosporus NRRL 11379]
          Length = 363

 Score = 82.5 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 86/252 (34%), Gaps = 23/252 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   + +  +            L  +  +   ++   R    +   +L GGK+ R   + 
Sbjct: 12  MQERIENYQRRFGVLFQDYFKRLRQEFDAPKLSRFTPRSFDLLEDLSLRGGKRQRVAFMY 71

Query: 60  ECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---- 114
           E A L     +  +     +IE +  + L+HDD+  +D+   RRG  + +  Y E     
Sbjct: 72  EAARLVTSEPVPGIDEAALSIELLQTHLLVHDDI--IDDAPTRRGGTSTYYSYKEEFPEQ 129

Query: 115 ------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  A++AG+     +  ++      L      +  L  T          GQM D++
Sbjct: 130 PQTALGLALLAGDLAAFLSLRVLLEADLPLS----LRQALVETQVTAGAATFVGQMYDLE 185

Query: 169 DEFIDETQVFMIQKMKTGA----LMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQL 223
            +        M+ ++              + G + A     + +  LR +    GI  Q+
Sbjct: 186 RDLPALPTEEMLHEVSDYKASRSSALAPIQLGLLAAGEDVKQFDATLRRYALMFGISGQM 245

Query: 224 ADDLLDCEEDLP 235
            DD L    D  
Sbjct: 246 CDDYLSLFGDEK 257


>gi|219122674|ref|XP_002181666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406942|gb|EEC46880.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 330

 Score = 82.5 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 15/205 (7%)

Query: 26  QTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALR-VGAAIECIH 83
             A  +  Q +  LL A RY   + GK +R  L+        V     L  +   +  +H
Sbjct: 12  DVAPLLPHQSDPSLLEAFRYINSVPGKDVRGKLIDCFQLWLKVESTEILDSIKDIVGDLH 71

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   DN  +RRG P  H  +     I   N +   A E + +  +     + 
Sbjct: 72  NASLLIDDIE--DNSKLRRGNPVAHSIFGIPQVINCSNYVYFLALEKVHALNSPTAMQVF 129

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAH 201
              +L+L           G  +  +D      E +   + + KTG L   A   G +   
Sbjct: 130 VGELLNLHRG-------QGHDIAWRDSIRCPTEGEYLTMVQDKTGGLFRLAV--GLMQCF 180

Query: 202 ASQNEKERLRCFGENLGIIFQLADD 226
           A+ +          NL + FQ+ DD
Sbjct: 181 ATTHRDTDFSNLVNNLAMYFQIRDD 205


>gi|148700812|gb|EDL32759.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Mus musculus]
          Length = 153

 Score = 82.5 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 12/150 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   RY L L GK++RS L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYRYLLQLPGKQVRSKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
                  +  +D +    E +   +   KT
Sbjct: 129 ------DIYWRDTYTCPTEEEYKAMVLQKT 152


>gi|328793673|ref|XP_396224.4| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
          Length = 418

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 79/240 (32%), Gaps = 31/240 (12%)

Query: 22  DLLLQTASHMQTQHND---RLLSAIRYALL-GGKKIRSFLVTECASLF-------NVNHL 70
           D+L + +     +  D        + Y +  GGK+ RS  +     L          N  
Sbjct: 87  DILRELSEEYNEELPDVKKWTKELLEYTVPKGGKR-RSVPIVIAYKLLASQDQLTEENIR 145

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +  +IE +  +  + DD+  +DN  +RR +PT H++     AI  G  L T  +++
Sbjct: 146 LARILAWSIEIMQAFHTMIDDI--LDNANMRRNQPTWHVKVGLG-AINDGLILETCIYKL 202

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGML------GGQMLDIQDEFIDETQVFMIQKMK 184
           I               +L   +     G             +         +   + K K
Sbjct: 203 IKKHFKSKNCYTDIVDILLKYNTKAAHGECLDILISTDWAKNENFNLFSMDRYNHLIKYK 262

Query: 185 TGAL-----MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE--EDLPKK 237
           T           A     I+                 +G +FQ+ +D LD    E++ +K
Sbjct: 263 TSYFSFILPFSLAMRFAGII---DPEMHREAEKILIKIGHLFQVQNDFLDYYSKEEIGEK 319


>gi|321466396|gb|EFX77392.1| hypothetical protein DAPPUDRAFT_305827 [Daphnia pulex]
          Length = 298

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 27/196 (13%)

Query: 35  HNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
            ++ LL    Y L + GK+IR  L        ++N      +   ++ +H  SL+     
Sbjct: 23  QDEILLQPFTYLLQVQGKQIRVKLSLAFDYWLHINPEKLNIINDVVQMLHNASLL----- 77

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
                   RG P  H  Y   + I + N +     E +          +  + +L L   
Sbjct: 78  --------RGIPVAHSIYGVASTINSANYVYFLGLEKVLGLNHPQATEVFCEQLLELHRG 129

Query: 154 IGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            G++       +  +D ++   E +  ++   KTG L   A     + +  +  +   L 
Sbjct: 130 QGME-------IYWRDSYVCPTEEEYRLMIVRKTGGLFGLAVRLMQLFS-TTTIDMNPLM 181

Query: 212 CFGENLGIIFQLADDL 227
                LG+ FQ+ DD 
Sbjct: 182 AI---LGLYFQIRDDY 194


>gi|308161121|gb|EFO63579.1| Farnesyl diphosphate synthase [Giardia lamblia P15]
          Length = 407

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 87/268 (32%), Gaps = 51/268 (19%)

Query: 14  KRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYALLGGKKIRSFLV---------TECA 62
           +++D  L+  +     ++ +     D ++  I+Y ++GGK  R  L             +
Sbjct: 27  EKVDNFLETFIPVYLPNLFSTSLLRDHIVEVIKYNVVGGKMTRGTLAADIFLQTVRFLFS 86

Query: 63  SLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            L   ++ +      A+ +    E +    L+ DD+  +D+  IRRGKP+      +  A
Sbjct: 87  GLLEDSNFSEELFNLAIDICLVQEILQGAFLMIDDV--IDHSTIRRGKPSWRAVVGDEQA 144

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           +  G  L   A  ++   + +    ++   +          G           +      
Sbjct: 145 VNDGLILWQIADSLVLYLEDKCGKTLKIFEVYHQAKANTTLGQHLDTFTKTYSQRHTMGH 204

Query: 177 VFMIQKMKTG-ALMCFACESG----------AIMAHA---------------------SQ 204
           +     +KT           G          AI   A                       
Sbjct: 205 LNDTYILKTAYYTFYLPLIMGYRSGVLFGNMAIGTSATSEKGYTMQKVDSILNLQQRLDT 264

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++++     +LG ++Q+ DD LD   
Sbjct: 265 DIEQQIYKISMDLGRLYQMQDDFLDFYA 292


>gi|325048848|dbj|BAJ79290.1| geranylgeranyl diphosphate synthase [Reticulitermes speratus]
          Length = 323

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 78/202 (38%), Gaps = 22/202 (10%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH-CYSLIH 89
             + ++++L  + + L + GK+IR+           V       V    +  H    LI 
Sbjct: 17  DMEQDEKILEPLTHILQVPGKQIRAKFARAFNYWLKVPENKLNVVKDIAQMFHYNAVLI- 75

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   DN  +RRG P  H  Y   + I A N LL    +   S        + ++  L 
Sbjct: 76  DDIR--DNSSLRRGIPVAHSIYGVASTINAANYLLLTGLKKAQSLNHPEAMTVCTEQFLE 133

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKT-GALMCFACESGAI-MAHASQN 205
           +    G++       +  +D +I     +   + K KT G LM    E   + +   ++ 
Sbjct: 134 MYWGDGME-------IYWRDNYICPSLEEYKQLIKRKTRGYLM---LEIALMQLFSDNKA 183

Query: 206 EKERLRCFGENLGIIFQLADDL 227
           +  +L      L + FQ+ DD 
Sbjct: 184 DLTKLTTI---LALYFQIRDDY 202


>gi|296229113|ref|XP_002760035.1| PREDICTED: RUN and SH3 domain-containing protein 1-like [Callithrix
           jacchus]
          Length = 870

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 81/251 (32%), Gaps = 33/251 (13%)

Query: 1   MNGGLPS--------KLQENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGK 51
           MNG   S        + Q+  +    I+  L      H +T     RL   + Y  +GGK
Sbjct: 67  MNGDQKSDKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGK 126

Query: 52  KIRSFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
             R   V                    AL VG  +E +  + L+ DD+  MD+   RRG+
Sbjct: 127 YHRGLTVLVAFRELAEPRKQDADSLQRALTVGWCVELLQAFFLVTDDI--MDSSLTRRGQ 184

Query: 105 PTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG- 162
              + +      AI     L    + ++   K   ++      ++ L      Q  +G  
Sbjct: 185 ICWYQKPGVGLDAINDAVLLEACVYRLL---KLYCREQPYYLNLIELFLQSSYQTEIGQT 241

Query: 163 -------QMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCF 213
                  Q     D F  E +   I K KT          +   MA    + E    +  
Sbjct: 242 LDLITAPQDNVDLDRF-TEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKI 300

Query: 214 GENLGIIFQLA 224
              +G  FQ+ 
Sbjct: 301 LLEMGEFFQIQ 311


>gi|255988559|gb|ACU51163.1| farnesyl pyrophosphate synthase [Nicotiana tabacum]
          Length = 234

 Score = 82.1 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 17/178 (9%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  IE +  Y L+ DD+  MDN + RRG+P  +        I   +G+L     I
Sbjct: 1   KASALGWRIEWLQAYFLVLDDI--MDNSHTRRGQPCWYKLPKVGM-IAVNDGILLRN-HI 56

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK 182
               K   +       +L L + +       GQM+D+    + E  +          I +
Sbjct: 57  TRILKNHFRAKPYYVDLLDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLPIHRRIVQ 115

Query: 183 MKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            KT             +MA  + ++   ++     +GI FQ+ DD LDC  D   L K
Sbjct: 116 YKTAYYSFYLPAACALLMAGDNLDKHVDVKNILIEMGIYFQVQDDYLDCFADPEVLGK 173


>gi|328862571|gb|EGG11672.1| hypothetical protein MELLADRAFT_41913 [Melampsora larici-populina
           98AG31]
          Length = 370

 Score = 82.1 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 91/264 (34%), Gaps = 50/264 (18%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV 67
           +  E   +I  +L D   Q    + ++  D     + Y   GGK  R   V +   +   
Sbjct: 11  RFLEVWPKIKEVLLDQAKQEK--LPSEAFDWFERNLDYNTPGGKLNRGTAVVDTFRILKG 68

Query: 68  NHLTAL------RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             LT+        +G  +E +  Y L+ DD+  MD    RRG+P  +   +       GN
Sbjct: 69  EELTSDEFFSSAALGWCVELLQAYFLVADDM--MDQSVTRRGQPCYYRLPE------VGN 120

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
             +  +F +  +    LK   R       +L L H++  Q  L GQ++D+     D   +
Sbjct: 121 IAINDSFMLEGTIYIILKKFFRQHPSYVNLLELFHDVTFQTEL-GQLIDLLAAPEDHVDL 179

Query: 178 --------FMIQKMKTG-ALMCFACESGAIMAHAS-------------------QNEKER 209
                    +I   KT              +   +                      ++ 
Sbjct: 180 NKFSLEKHQLIVLYKTAFYSFYLPVALAMRLYGMTSPNDPGQSESNECKNGTKTDCYRQA 239

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           +      LG+ FQ+ DD LDC  D
Sbjct: 240 MDIL-LPLGVYFQVQDDYLDCYGD 262


>gi|114560099|ref|XP_001159738.1| PREDICTED: farnesyl diphosphate synthase isoform 1 [Pan
           troglodytes]
          Length = 332

 Score = 82.1 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 84/249 (33%), Gaps = 30/249 (12%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 1   MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 60

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 61  GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 118

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 119 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 174

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 175 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 234

Query: 217 LGIIFQLAD 225
           +G  FQ+ D
Sbjct: 235 MGEFFQIQD 243


>gi|302852307|ref|XP_002957674.1| hypothetical protein VOLCADRAFT_98778 [Volvox carteri f.
           nagariensis]
 gi|300256968|gb|EFJ41223.1| hypothetical protein VOLCADRAFT_98778 [Volvox carteri f.
           nagariensis]
          Length = 340

 Score = 82.1 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 75/235 (31%), Gaps = 42/235 (17%)

Query: 17  DTILDD--LLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNV 67
           D +L+D  L     S       +       Y + GGK  R   V +          L   
Sbjct: 29  DELLNDECLSPANDSAQAKAAQEWFKEVNDYNVPGGKLNRGMAVYDVLSSIKGVEELTEE 88

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
           +   A  +G  IE +  + L+ DD+  MD    RRG+P  +        +IA N  +   
Sbjct: 89  DIFKANALGWCIEWLQAFFLVADDI--MDGSITRRGQPCWYKVP--KVGMIACNDYILLD 144

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--------DETQVFM 179
             I    K   + +     ++ L H +       GQ+LD+    I         +     
Sbjct: 145 CCIYRILKKHFRSHSAYAQLVDLFHEV-TFQTSHGQLLDLTTAPIGSVDLAKYTQDNYLR 203

Query: 180 IQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KT           G ++A                     Q+ DD LDC  D
Sbjct: 204 IVTYKTAYYSFYLPVACGMVLAGI-------------------QIQDDYLDCCGD 239


>gi|291446614|ref|ZP_06586004.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291349561|gb|EFE76465.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 359

 Score = 82.1 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 86/252 (34%), Gaps = 23/252 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           M   + +  +            L  +  +   ++   R    +   +L GGK+ R   + 
Sbjct: 8   MQERIENYQRRFGVLFQDYFKRLRQEFDAPKLSRFTPRSFDLLEDLSLRGGKRQRVAFMY 67

Query: 60  ECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV---- 114
           E A L     +  +     +IE +  + L+HDD+  +D+   RRG  + +  Y E     
Sbjct: 68  EAARLVTSEPVPGIDEAALSIELLQTHLLVHDDI--IDDAPTRRGGTSTYYSYKEEFPEQ 125

Query: 115 ------TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                  A++AG+     +  ++      L      +  L  T          GQM D++
Sbjct: 126 PQTALGLALLAGDLAAFLSLRVLLEADLPLS----LRQALVETQVTAGAATFVGQMYDLE 181

Query: 169 DEFIDETQVFMIQKMKTGA----LMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQL 223
            +        M+ ++              + G + A     + +  LR +    GI  Q+
Sbjct: 182 RDLPALPTEEMLHEVSDYKASRSSALAPIQLGLLAAGEDVKQFDATLRRYALMFGISGQM 241

Query: 224 ADDLLDCEEDLP 235
            DD L    D  
Sbjct: 242 CDDYLSLFGDEK 253


>gi|303391601|ref|XP_003074030.1| farnesyl pyrophosphate synthetase [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303303179|gb|ADM12670.1| farnesyl pyrophosphate synthetase [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 292

 Score = 82.1 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 90/227 (39%), Gaps = 29/227 (12%)

Query: 19  ILDDLLLQTASHMQTQHND-RLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTALRVG 76
           ++ +++ +    +   +N   +L  + Y L GGK++R        +  N   +   L VG
Sbjct: 1   MIKEIVKRKVLQLSDYYNKSEILFLLDYNLEGGKELRYKAYIHVLNALNGEMNEKNLTVG 60

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE +    LI DDL  MDN  +RR KP  +++             +  AF ++   + 
Sbjct: 61  YTIELLQAALLITDDL--MDNSEVRREKPCYYLKRGTKV--------IKDAFFLLGVIRK 110

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQKMKTGALMCFAC 193
            +   ++     S      +     GQ  D   +   E        I + KTGA   +  
Sbjct: 111 MIDKRMKRPYSYS------IFKTCIGQTHDTIRKTRAEYNIEAYTAIAESKTGA---YTF 161

Query: 194 ESGAIMA--HASQNEKERLRCFGENLG-IIFQLADDLLDCE-EDLPK 236
              AI     A + E E L  F  NLG +IFQ+ DD L+   E   K
Sbjct: 162 YLPAIFGYISAKKKEPEYLWDF-CNLGALIFQMQDDYLNFFPEKSGK 207


>gi|302421470|ref|XP_003008565.1| farnesyl pyrophosphate synthetase [Verticillium albo-atrum
           VaMs.102]
 gi|261351711|gb|EEY14139.1| farnesyl pyrophosphate synthetase [Verticillium albo-atrum
           VaMs.102]
          Length = 346

 Score = 82.1 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 29/205 (14%)

Query: 48  LGGKKIRSFLVTECASLF------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           LGGK  R   V +  SL          +  A  +G   E +  + L+ DD+  MD+   R
Sbjct: 46  LGGKCNRGMSVPDSVSLLLEKPLTEEQYFEAATLGWMTELLQAFFLVSDDI--MDSSITR 103

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL----MLSLTHNIGLQ 157
           RGKP  +           G   +  AF + ++  T LK   RS      ++ L H++   
Sbjct: 104 RGKPCWYRHEG------VGMVAINDAFMLEAAIYTLLKKFFRSHPSYVDLIELFHDV-TF 156

Query: 158 GMLGGQMLD--------IQDEFIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEK 207
               GQ+ D        +  +     +   I   KT     +   + A+  +  A+ N  
Sbjct: 157 ETEMGQLCDLLTAPEDKVNLDNFSMDKYSFIVIYKTAYYSFYLPVALALHCLNIATPNNL 216

Query: 208 ERLRCFGENLGIIFQLADDLLDCEE 232
           ++       LG  FQ+ DD LD   
Sbjct: 217 KQAEAILIPLGEYFQVQDDYLDNFG 241


>gi|328793440|ref|XP_396188.3| PREDICTED: decaprenyl-diphosphate synthase subunit 1-like [Apis
           mellifera]
          Length = 210

 Score = 82.1 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
           + G+ +L     +++  +        SQ++  L     +      Q+   + E       
Sbjct: 1   MTGDYILAVTTNMLAKLRNDDITLTLSQVVTDLVQGEFM------QLGSKETENERFAHY 54

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                 KT +L+    ++ A++A A     E    +G N+G+ FQL DDLLD    LP
Sbjct: 55  LTKTYRKTASLIANTLKAEAMLADADDQLAELAFQYGRNIGLAFQLVDDLLDFVSTLP 112


>gi|67902312|ref|XP_681412.1| hypothetical protein AN8143.2 [Aspergillus nidulans FGSC A4]
 gi|40739975|gb|EAA59165.1| hypothetical protein AN8143.2 [Aspergillus nidulans FGSC A4]
 gi|259480909|tpe|CBF73971.1| TPA: geranylgeranyl pyrophosphate synthetase AtmG, putative
           (AFU_orthologue; AFUA_8G02400) [Aspergillus nidulans
           FGSC A4]
          Length = 355

 Score = 82.1 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 73/204 (35%), Gaps = 30/204 (14%)

Query: 34  QHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +  + + + + Y + L GK IR  L++     F +       +  A+  +H  SL+ DD+
Sbjct: 65  KEEEIISAPVHYISTLPGKDIRGKLISAFNEWFQIPDEQLEIIKRAVGLLHVASLLIDDI 124

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLT 151
              D   +RRG P  H  +     I + N     A   +   +   K   I ++ +L L 
Sbjct: 125 E--DYSKLRRGFPVAHSIFGIPQTINSANYAYFQAQNEVLKLRRCEKALRIFTEELLRLH 182

Query: 152 HNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
              G+        L  +D      E +   +   KTG L   A +   + +   +     
Sbjct: 183 RGQGM-------DLYWRDSLTCPSEEEYLDMVANKTGGLFRLAIKLIQLESDVDE----- 230

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
                      F + DD  + + D
Sbjct: 231 -----------F-IRDDYQNLQSD 242


>gi|307166112|gb|EFN60361.1| Farnesyl pyrophosphate synthetase [Camponotus floridanus]
          Length = 379

 Score = 81.7 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 66/218 (30%), Gaps = 23/218 (10%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCY 85
              +  +   ++Y + GGKK R   +     L          N   A  +   +E    +
Sbjct: 64  PDISKWMAKVLQYNVPGGKKNRGLALVYAYKLLVPNDQLTEENIRLARILAWCVELAQAF 123

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
            L+ DD+   D    RR +P  +   D   A +    LL  A   +   +   K      
Sbjct: 124 FLLLDDIQ--DRSLFRRNQPCWYRHNDIGLAAVNDGTLLENALYFL--IRKHFKGKECYI 179

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFI---------DETQVFMIQKMKT-GALMCFACES 195
            +L    +I L     GQ LD+                 +   I K K            
Sbjct: 180 DILETFQHIILM-TAMGQSLDLLSTNFGKKPNLNLFTMDRYNSIVKYKCSYYTFILPITV 238

Query: 196 GAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               A         + +     +G  FQ+ DD LDC  
Sbjct: 239 AMHFAGIKDPEMLRQTKTILLEMGHFFQVQDDYLDCYG 276


>gi|1524345|emb|CAA65642.1| farnesyl pyrophosphate synthetase [Sphaceloma manihoticola]
          Length = 212

 Score = 81.7 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 77/206 (37%), Gaps = 22/206 (10%)

Query: 49  GGKKIRSFLVTECASLFNVNHL------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK  R   V + +S      L       +  +G  IE +  + L+ DD+  MD+   RR
Sbjct: 1   GGKCNRGMSVVDTSSFLLGRPLSKDEYFKSATLGWMIELLQAFFLVSDDI--MDSSKTRR 58

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P  ++        I    +L  +  ++   K   + +     ++ L H +  Q  +G 
Sbjct: 59  GSPCWYLMPQVGMVAINDAFMLETSIYLL--LKKYFRQSKHYVDLIELFHEVSFQTEMGQ 116

Query: 163 QML------DIQD-EFIDETQVFMIQKMKTGALMCFACESGAIMAH--ASQNEKERLRCF 213
           Q        D  D +     +   I   KT     +   + A+     A++   ++ +  
Sbjct: 117 QCDLLTAPEDKVDLDNFSLEKYSFIVIYKTAFYSFYLPVALALYYCELATEKNLKQAKDI 176

Query: 214 GENLGIIFQLADDLLDCEED---LPK 236
              +G  FQ+ DD LD   D   L K
Sbjct: 177 LIPMGEYFQVQDDYLDNYADPETLGK 202


>gi|114560079|ref|XP_513857.2| PREDICTED: similar to Ac2-125 isoform 12 [Pan troglodytes]
          Length = 867

 Score = 81.4 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 30/248 (12%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +      RL   + Y  +GGK  R
Sbjct: 67  MNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNR 126

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 127 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDI--MDSSLTRRGQICW 184

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI   N L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 185 YQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 240

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 241 LLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 300

Query: 217 LGIIFQLA 224
           +G  FQ+ 
Sbjct: 301 MGEFFQIQ 308


>gi|19112126|ref|NP_595334.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces pombe 972h-]
 gi|74626740|sp|O59703|GGPPS_SCHPO RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase; AltName:
           Full=Sporulation-specific protein 9
 gi|3135993|emb|CAA19054.1| farnesyl pyrophosphate synthetase [Schizosaccharomyces pombe]
          Length = 351

 Score = 81.4 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 79/222 (35%), Gaps = 23/222 (10%)

Query: 33  TQHNDRLLSAIRYALLGGKKIRSFLVTECA------SLFNVNHLTALRVGAAIECIHCYS 86
            +  ++LL +I+   LGGK  R   V +         L       A  +G  IE +    
Sbjct: 37  PEETEKLLYSIKRNTLGGKNNRGLAVLQSLTSLINRELEEAEFRDAALLGWLIEILQGCF 96

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MD    RRG    ++      AI   + LL     ++   +   ++      
Sbjct: 97  LMADDI--MDQSIKRRGLDCWYLVVGVRRAINE-SQLLEACIPLL--IRKYFRNMPYYVD 151

Query: 147 MLSLTHNIGLQGMLGGQ-------MLDIQDEFIDETQVFMIQKMKT-GALMCFACESGAI 198
           +L     +     LG Q         +      D  +   I   KT         +   +
Sbjct: 152 LLDTFREVTFLTELGQQEDLLSSRDGEASLRSFDLMKYDFIITYKTSFYSFYLPIKCALL 211

Query: 199 MA-HASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
           ++ +++Q   +      + LG  FQ+ DD LDC  D   L K
Sbjct: 212 LSRNSNQKAYDTTIKLSKLLGYYFQVQDDYLDCFGDYTVLGK 253


>gi|294816184|ref|ZP_06774827.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328783|gb|EFG10426.1| dimethylallyltranstransferase / geranyltranstransferase /
           geranylgeranyl pyrophosphate synthetase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 396

 Score = 81.4 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 9/181 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH------DDLPSMDNGYIR 101
           +GG  +R  L+   A          L     +E +H  SL H       D    D     
Sbjct: 98  MGG-LLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPGRRDVPGAP 156

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
             +  V+ +    TA++ G+  L   FE +S    +     R   +  +    G     G
Sbjct: 157 DPRTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAG 216

Query: 162 GQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                     +D          ++ T      AC  GA +A A     + L  +GE LG+
Sbjct: 217 ATRERATAGRLDIEAEHWLETARLTTAVPFAAACRVGATLAGAPPEWTDALAVYGEQLGM 276

Query: 220 I 220
            
Sbjct: 277 A 277


>gi|134300028|ref|YP_001113524.1| geranylgeranyl pyrophosphate synthase-like protein
           [Desulfotomaculum reducens MI-1]
 gi|134052728|gb|ABO50699.1| Geranylgeranyl pyrophosphate synthase-like protein
           [Desulfotomaculum reducens MI-1]
          Length = 162

 Score = 81.4 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 34  QHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLP 93
             N  L SA    + GGK+IR  LV        + +   +++  A+E +H  +L HDD+ 
Sbjct: 39  PSNHLLGSAHNLIIAGGKRIRPALVLLAGKQ-GLVNKQVMQLAIAVEILHLATLTHDDI- 96

Query: 94  SMDNGYIRRGKPTVH 108
            +DN   RRGKP  H
Sbjct: 97  -IDNAATRRGKPAAH 110


>gi|116179884|ref|XP_001219791.1| hypothetical protein CHGG_00570 [Chaetomium globosum CBS 148.51]
 gi|88184867|gb|EAQ92335.1| hypothetical protein CHGG_00570 [Chaetomium globosum CBS 148.51]
          Length = 352

 Score = 81.4 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 11/149 (7%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            GK  RS LV    +   V   +   +   +  +H  SL+ DD+   DN  +RRG P  H
Sbjct: 191 PGKDFRSALVKAFDAWLEVPPESLEVITKVVGMLHTASLLVDDVE--DNSQLRRGYPVAH 248

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
             +     I + N +   A + +   K     +I ++ +++L    G+        L  +
Sbjct: 249 AIFGIPQTINSSNYIYFCALQELQKLKNPKAVSIFAEELVNLHRGQGM-------DLFWR 301

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACES 195
           D      E     +   KTG L     + 
Sbjct: 302 DTLTCPTEDDYLEMVSNKTGGLFRLGIKL 330


>gi|67619073|ref|XP_667626.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis TU502]
 gi|54658782|gb|EAL37400.1| farnesyl pyrophosphate synthase [Cryptosporidium hominis]
          Length = 353

 Score = 81.4 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 16/200 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           I Y +  GK IR  ++   +SL     N+   +   +G  +E I    LI DD+  MD+G
Sbjct: 49  IDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--MDSG 106

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG P  +I + +  AI     L   +  +I    +   D+I  +  +   +N  +  
Sbjct: 107 KFRRGAPCWYIVHGQSNAINDIFFLKMLSLSLIFELSSVFGDDIVMK--IQKIYNESIFF 164

Query: 159 MLGGQMLDIQDEFIDE-----TQVFMIQKMKTG-ALMCFACESGAIMA--HASQNEKERL 210
            + GQ LD+    + +      + F + +MKT           G  ++    S  +   +
Sbjct: 165 TVLGQHLDLSYFDLSKVDKISERYFSMVEMKTSRYTFYMPVFFGLTLSEIQVSSAQLNLI 224

Query: 211 RCFGENLGIIFQLADDLLDC 230
                 LG  +Q+ +D+ D 
Sbjct: 225 EAILYKLGEFYQVHNDVSDY 244


>gi|333022534|ref|ZP_08450598.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp.
           Tu6071]
 gi|332742386|gb|EGJ72827.1| putative geranylgeranyl pyrophosphase synthase [Streptomyces sp.
           Tu6071]
          Length = 467

 Score = 81.0 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 61/252 (24%), Positives = 99/252 (39%), Gaps = 40/252 (15%)

Query: 13  SKRIDTILDDLLL-------QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           S  +  +L+ LL        +  +    Q    L +  R    GG+++RS  V     + 
Sbjct: 32  SAAVAEVLERLLAPRVAEAARLDASFGRQVAQWLAATTR---GGGRRLRSAFVWWGLRVA 88

Query: 66  -----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-------- 112
                      AL VGAA+E +   +L+ DD+  MDN  +RRG+P +H+           
Sbjct: 89  CPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRGQPALHVLLGSTRAAAAG 146

Query: 113 -------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                  +  A++AG+  + +A +  +      +     + + S+        M+ GQ L
Sbjct: 147 PGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLWSVLRT----EMIAGQYL 202

Query: 166 D---IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D     D     T       +K+G   +    E GA++A A       LR  G   G+ F
Sbjct: 203 DLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAAPPEVCRVLRAAGGAAGLAF 262

Query: 222 QLADDLLDCEED 233
           QL DDLL    D
Sbjct: 263 QLRDDLLAVWGD 274


>gi|296198711|ref|XP_002746822.1| PREDICTED: farnesyl pyrophosphate synthase-like [Callithrix
           jacchus]
          Length = 372

 Score = 81.0 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 84/255 (32%), Gaps = 27/255 (10%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +T     RL   ++Y  +G K  R
Sbjct: 21  MNGDQKSDVYAQEKQDFVQHFSQIVRVLNEDEMGHPETGDAIARLKEVLKYNAIGSKYHR 80

Query: 55  SFLVT-ECASLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V      L       A      L VG  +E +  + L+ DD+  MD+      +   
Sbjct: 81  GLTVLVAFWELVKPRKQDAESLQRALTVGWCVELLQAFFLVTDDI--MDSSLTHWKQICW 138

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + +L  A  I +  K   +       ++ L      Q  + GQ LD+
Sbjct: 139 YQKPGVGL-DAINDAILLEA-CIYTLLKLYCQKQPYYLNLIELFLQSSYQTEI-GQTLDL 195

Query: 168 QDE--------FIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQNEKERLRCFGENLG 218
                         E +   I K K          +   MA   S+ E    +     +G
Sbjct: 196 ITAPQKNVGLGRFTEKRYKSIVKYKMAFYFYLPVATAMYMAGTDSEKEHANAKKILLEMG 255

Query: 219 IIFQLADDLLDCEED 233
             FQ+ DD LD   D
Sbjct: 256 EFFQIQDDYLDLFGD 270


>gi|61744001|gb|AAX55631.1| farnesyl diphosphate synthase [Ips pini]
          Length = 433

 Score = 81.0 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 88/258 (34%), Gaps = 38/258 (14%)

Query: 2   NGGLPSKLQ--ENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVT 59
           +  L SK Q  +   +   I+ +L     +    +   R    ++Y    GKK R  +  
Sbjct: 87  SSSLASKEQSRDFMAQFPDIIRELTEVGRNQELPEVMKRYARVLQYNTPNGKKTRGLITI 146

Query: 60  ECASLFNVNHL-------TALRVGAAIECIHCYSLI------HDDLPSMDNGYIRRGKPT 106
               +              A  +G  IE +H Y LI      H           RRG   
Sbjct: 147 STYKMLEDPAKITTENLKKAGILGWCIEMLHTYFLIIDDIIDH--------SDTRRGAIC 198

Query: 107 VHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
            + Q     TA+     +    + ++   K   KD+     ++ L H++ L+  L GQ L
Sbjct: 199 WYRQPGIGLTAVYDAVMMENGVYLLL---KRHFKDHPMYTNIIELFHDMALKTSL-GQSL 254

Query: 166 DIQDEFID--------ETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGE 215
           D      D          Q   I   KT     +   + A+  +      +  + R    
Sbjct: 255 DTMCLNDDGKPKLDIHNEQDTSIVNYKTSYYSFYLPVAAAMYLLGMDDPEQHRQARTILL 314

Query: 216 NLGIIFQLADDLLDCEED 233
           ++G  FQ+ DD LDC  D
Sbjct: 315 DMGQFFQIQDDFLDCFGD 332


>gi|71026636|ref|XP_762981.1| farnesyl pyrophosphate synthetase [Theileria parva strain Muguga]
 gi|68349933|gb|EAN30698.1| farnesyl pyrophosphate synthetase, putative [Theileria parva]
          Length = 353

 Score = 81.0 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 29/214 (13%)

Query: 42  AIRYALLGGKKIRS-FLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLP 93
           AI+Y L  GK +R   L++   SL   N    L        +   +E +    L+ DD+ 
Sbjct: 50  AIQYNLQ-GKMLRGTMLMSTVKSLCGTNIPENLTTQTLIAGMSWCVELLQTSFLVADDI- 107

Query: 94  SMDNGYIRRGKPTVHIQY--DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
            +D    RR     ++        AI     L T  + I+       K+ +     +  T
Sbjct: 108 -IDKSLKRRSNTCWYLVPTIGVENAINDVMFLYTLIYRILFKTLKDTKNFLE----IVET 162

Query: 152 HNIGLQGMLGGQMLDIQDEFIDE--------TQVF-MIQKMKT-GALMCFACESGAIMAH 201
            N      + GQ LDI +   +         T++F  I K KT         + G +++ 
Sbjct: 163 FNRISMTTILGQHLDIYESNTNRLFQDSNEATKLFAEICKNKTSYYSFFLPLKLGMVLSG 222

Query: 202 A--SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
              S     ++      +G +FQ  DD LDC  D
Sbjct: 223 VELSNLFYSKVESISVLIGTLFQAQDDYLDCYGD 256


>gi|119174214|ref|XP_001239468.1| hypothetical protein CIMG_09089 [Coccidioides immitis RS]
          Length = 643

 Score = 81.0 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 18/216 (8%)

Query: 19  ILDDLL-LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            L D++ L    ++    +D +L   RY   L  K  R   +    +   V   +A  + 
Sbjct: 408 ALADVVSLAVDLNLPELSDDVVLQPYRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAKMIK 467

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           + ++ +H  SL+ DD+   D+  +RRG+P+ H  Y     I +       A  + +    
Sbjct: 468 SIVKMLHSASLMLDDIE--DDSPLRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGN 525

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFA 192
                I  + M         Q +  GQ  D+           ++   +  MKTG L    
Sbjct: 526 PSCLRIFIEEM---------QQLHVGQSYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRML 576

Query: 193 CESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDL 227
                  +   +    + L      +G  FQ+ DD 
Sbjct: 577 TRLMVAESPVGEKVSDDALNLLSCLVGRFFQIRDDY 612


>gi|109017244|ref|XP_001116106.1| PREDICTED: RUN and SH3 domain-containing protein 1 isoform 7
           [Macaca mulatta]
          Length = 867

 Score = 81.0 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 30/248 (12%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      H +T     RL   + Y  +GGK  R
Sbjct: 67  MNGDQKSDVYAQEKQDFVQHFSQIVRVLTEDEMGHPETGDAIARLKEVLEYNAIGGKYHR 126

Query: 55  SF-LVTECASLFNVNHLTALRV------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              +V     L       A  +      G  +E +  + L+ DD+  MD+   RRG+   
Sbjct: 127 GLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVTDDI--MDSSLTRRGQICW 184

Query: 108 HIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
           + +      AI     L    + ++   K   ++      ++ L      Q  + GQ LD
Sbjct: 185 YQKPGVGLDAINDAILLEACIYRLL---KLYCREQPYYLNLIELFLQSSYQTEI-GQTLD 240

Query: 167 IQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGEN 216
           +              E +   I K KT          +   MA    + E    +     
Sbjct: 241 LITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLE 300

Query: 217 LGIIFQLA 224
           +G  FQ+ 
Sbjct: 301 MGEFFQIQ 308


>gi|18478922|gb|AAL73358.1|AF386103_1 farnesyl diphosphate synthase precursor [Trypanosoma cruzi]
          Length = 316

 Score = 80.6 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 74/221 (33%), Gaps = 37/221 (16%)

Query: 50  GKKIRSFLVTECASLF-------NVNHLTALRVGAA----IECIHCYSLIHDDLPSMDNG 98
           GK  R   V   A  F              L         IE +  + L+ DD+  MD  
Sbjct: 1   GKYFRGMTVVNVAEGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDI--MDGS 58

Query: 99  YIRRGKPTVHIQYDEVT--AIIAGNGLLTYAFEIIS----SPKTQLKDNIRSQLMLSLTH 152
            +RRGKP  +      T  AI  G  L ++  +I++    + +  LKD +     +    
Sbjct: 59  VMRRGKPCWYRFPGVTTQCAINDGIILKSW-TQIMAWHYFADRPFLKDLLCLFQKVDYAT 117

Query: 153 NIGLQG----MLG--------GQMLDIQDEFIDETQVFMIQKMKT-GALMCFACESGAIM 199
            +G       M           Q +              I K KT           G  +
Sbjct: 118 AVGQMYDVTSMCDSNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFV 177

Query: 200 AHASQNEKERL-RCFGENLGIIFQLADDLLDCE---EDLPK 236
           + A+ + +  L       +G  FQ+ DD++DC    E L K
Sbjct: 178 SEAAASVEMNLVERVAHLIGEYFQVQDDVMDCFTPPEQLGK 218


>gi|253761777|ref|XP_002489263.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor]
 gi|241947012|gb|EES20157.1| hypothetical protein SORBIDRAFT_0011s005450 [Sorghum bicolor]
          Length = 325

 Score = 80.6 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%)

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           Q   + D  I      +    KT +L+  +  S AI +  S +  E++  +G NLG+ FQ
Sbjct: 155 QASTLFDCDITLDDYLLKSYYKTASLIAASTRSAAIFSGVSTSICEQMYEYGRNLGLSFQ 214

Query: 223 LADDLLDCEE 232
           + DD+LD  +
Sbjct: 215 VVDDILDFTQ 224


>gi|307215481|gb|EFN90138.1| Farnesyl pyrophosphate synthetase [Harpegnathos saltator]
          Length = 356

 Score = 80.6 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 25/234 (10%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHL 70
            I+ DL            +  +   ++Y + GGKK R   +     +          N  
Sbjct: 26  DIVRDLTEVCQHSDIPNISKWIAKVLQYNVPGGKKTRGLALVYAYKMLVSSDQITEENIR 85

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL-TYAFE 129
               +   +E +H + ++ DD+   D    RR +P  ++  D   A I  + ++ +  ++
Sbjct: 86  AIRILAWCVELLHAFFIMIDDIQ--DRSQFRRNQPCWYLHNDMGLAAINDSLMIESIMYQ 143

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---------DETQVFMI 180
           ++    +     +     L  T        + GQ LD+Q                +   I
Sbjct: 144 LLRKSFSGKNCYVD----LVETFQDITLKTILGQSLDLQSTNFGKMPNLNLFTMDRYNSI 199

Query: 181 QKMKT-GALMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              K+              +A    Q    + +     +G  FQ+ DD LDC  
Sbjct: 200 VNYKSSYYTFILPVTVAMHVAGIKDQEMFRQAKTILLEMGHFFQVQDDYLDCYG 253


>gi|253742869|gb|EES99536.1| Farnesyl diphosphate synthase [Giardia intestinalis ATCC 50581]
          Length = 407

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 84/268 (31%), Gaps = 51/268 (19%)

Query: 14  KRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYALLGGKKIRSFLV---------TECA 62
           ++ID  LD         + +     + +   I+Y  +GGK  R  L              
Sbjct: 27  EKIDDFLDTFASLYLPGLSSTGLLREHIAEVIKYNAIGGKMTRGTLAADVFLQTVRFLFP 86

Query: 63  SLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            L   ++ +      ++ +    E +    L+ DD+  +D+  +RRGKP+      +  A
Sbjct: 87  GLLEDSNFSEELLNLSIDICLIQETLQAAFLMLDDV--IDHSTVRRGKPSWRTVVGDEQA 144

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           +  G  L   A  +    + +    ++   +        + G           +      
Sbjct: 145 VNDGMMLWQVADSLTFYLEDKCGKTLKIFEVFHQVKANTIFGQHLDTFTKTYSQRYTMRH 204

Query: 177 VFMIQKMKTG-ALMCFACESG----------AIMAHA---------------------SQ 204
           +     +KT      F    G          AI A A                       
Sbjct: 205 LNDTYILKTAYYTFYFPLMMGYRAGVLFGNVAIGASAASEGRQTMQKVDSILNLQQHLDA 264

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++++     +LG ++Q+ DD LD   
Sbjct: 265 DVEQQIYKISMDLGRLYQMQDDFLDFYA 292


>gi|326444518|ref|ZP_08219252.1| polyprenyl synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 373

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 9/181 (4%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH------DDLPSMDNGYIR 101
           +GG  +R  L+   A          L     +E +H  SL H       D    D     
Sbjct: 75  MGG-LLRPLLLVRSALAVGGTLAPVLPAAVGLEYVHMGSLGHRTGAPGSDPGRRDVPGAP 133

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
             +  V+ +    TA++ G+  L   FE +S    +     R   +  +    G     G
Sbjct: 134 DPRTAVYDRLGSATAVVMGSTPLYAWFEALSECAARGVREDRIAAVCRVQAEAGRAVRAG 193

Query: 162 GQMLDIQDEFIDET--QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                     +D          ++ T      AC  GA +A A     + L  +GE LG+
Sbjct: 194 ATRERATAGRLDIEAEHWLETARLTTAVPFAAACRVGATLAGAPPEWTDALAVYGEQLGM 253

Query: 220 I 220
            
Sbjct: 254 A 254


>gi|212530618|ref|XP_002145466.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210074864|gb|EEA28951.1| geranylgeranyl pyrophosphate synthase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 297

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 22/163 (13%)

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           I+ +H  SL+ DD+   D+  +RRG P+ H+ +     I A N L   A E+     +  
Sbjct: 145 IDTLHNSSLMLDDIE--DDSPLRRGFPSTHVVFGISQTINAANYLYVIALEMAQKLNSPA 202

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACE 194
             N+  + +         + +  GQ LD+            +   +   KTG L     +
Sbjct: 203 CLNVFIEEL---------KRLHIGQSLDLYWTANVQCPSLEEYLKMVDHKTGGLFQMVAK 253

Query: 195 SGAIMAHASQNEKERL---RCFGENLGIIFQLADDLLDCEEDL 234
             A+ +   +   + L     FG      FQ+ DD  +   D 
Sbjct: 254 LTALRSPVVRRVPDLLNMTTLFGRY----FQIRDDYQNLMSDE 292


>gi|170779365|gb|ACB37020.1| farnesyl-diphosphate synthase [Ganoderma lucidum]
 gi|170779367|gb|ACB37021.1| farnesyl-diphosphate synthase [Ganoderma lucidum]
          Length = 360

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 84/247 (34%), Gaps = 29/247 (11%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDR-----LLSAIRYALLGGKKIRSFLVTECASL 64
            +  ++ D +   L  +  +++  +   +         + Y + GGK  R   V +   +
Sbjct: 6   AQKRQKFDNVFPKLREELLAYLNQEGMPQDAVSWFQRNLDYNVPGGKLNRGISVVDSVEI 65

Query: 65  FNV---NHLTALRVG---AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                 N     +       +E +  + L+ DD+  MD    RRG+P            I
Sbjct: 66  LKGRKLNDDEYFKAALLGWCVEFLQAFFLVSDDM--MDQSVTRRGQPCWFRVEGINLIAI 123

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV- 177
             + +L  A   +   K   +       +L L H+   Q  + GQ++D+     D   + 
Sbjct: 124 NDSFMLEGAIYYL--LKKHFRSEPYYVHLLELFHDTTFQTEI-GQLIDLITAPEDHVDLS 180

Query: 178 -------FMIQKMKTGALMCFACESGAIMA----HASQNEKERLRC-FGENLGIIFQLAD 225
                    I   KT     +   + A+      HA  N+   L       LG  FQ+ D
Sbjct: 181 KFSLAKHQKIVIYKTAYYSFYLPVALAMYTCGVPHAPANDPYALAQSILIPLGEYFQVQD 240

Query: 226 DLLDCEE 232
           D LD   
Sbjct: 241 DFLDFAA 247


>gi|115390482|ref|XP_001212746.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114195142|gb|EAU36842.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 773

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 81/245 (33%), Gaps = 31/245 (12%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASL 64
           P+KLQ++   I++     +    +  Q    D   +   Y   L  KK R+ L+      
Sbjct: 452 PAKLQQHGTSINS-----MAIYTAPFQEAAGDICDAPYSYIDSLPSKKNRNKLLDLLNDW 506

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
             V   +  R+   +  +H  SL+ DD+   D   +RRG+P  H  Y     I + N + 
Sbjct: 507 LQVPPSSLKRIKNIVHMLHNSSLMLDDIE--DASALRRGQPATHTFYGISQTINSANYVY 564

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
            +A   ++       D +R+            +G                 +  ++   K
Sbjct: 565 VHAVHEVTRLYNPDADELRNLH----------RGQSLDLYWRHHARCPSMEEYIVMVDNK 614

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL-----DCEE------- 232
           TG L           +  S+     L       G  +Q+ DD L     D E        
Sbjct: 615 TGGLFRLMLRLMTAESSISRPLDTALCRLLTLTGRYYQIRDDYLNLASADYESKKGFCED 674

Query: 233 -DLPK 236
            D  K
Sbjct: 675 FDEGK 679


>gi|159118517|ref|XP_001709477.1| Farnesyl diphosphate synthase [Giardia lamblia ATCC 50803]
 gi|157437594|gb|EDO81803.1| Farnesyl diphosphate synthase [Giardia lamblia ATCC 50803]
          Length = 407

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 89/268 (33%), Gaps = 51/268 (19%)

Query: 14  KRIDTILDDLLLQTASHMQTQH--NDRLLSAIRYALLGGKKIRSFLV---------TECA 62
           +++D+ L+  +     ++ +     D ++  I+Y ++GGK  R  L             +
Sbjct: 27  EKVDSFLETFIPVYLPNLFSTGLLRDHIVEVIKYNVVGGKMTRGTLAADIFLQTVRFLFS 86

Query: 63  SLFNVNHLT------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
            L   ++ +      A+ +    E +    L+ DD+  +D+  IRRGKP+      +  A
Sbjct: 87  GLLEDSNFSEELFNLAIDICLVQEILQGAFLMIDDV--IDHSTIRRGKPSWRAVVGDEQA 144

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           +  G  L   A  ++   + +    ++   +          G           +      
Sbjct: 145 VNDGLILWQIADSLVLYLEDKCGKTLKIFEVYHQAKANTTLGQHLDTFTKTYSQRHTMGH 204

Query: 177 VFMIQKMKTGALMCF-----ACESGAIMAH---------------------------ASQ 204
           +     +KT     +        SG +  +                              
Sbjct: 205 LNDTYILKTAYYTFYLPLIMGYRSGVLFGNMAIGTTAASEKGYTMQKVDSILNLQQRLDT 264

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEE 232
           + ++++     +LG ++Q+ DD LD   
Sbjct: 265 DIEQQIHKISMDLGRLYQMQDDFLDFYA 292


>gi|303286197|ref|XP_003062388.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455905|gb|EEH53207.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 336

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 77/232 (33%), Gaps = 23/232 (9%)

Query: 12  NSKRIDTILDDLLLQTASHMQTQHNDRLLSAI-RYALLGGKKIRSFLVTECASLFNVNHL 70
             K  +++  +L+    +  Q Q   + +  +  Y +  GK  R   V +          
Sbjct: 17  FLKTFESLRSELVDAERADGQVQIAIQWIDKMVEYNVPHGKLNRGLAVIDGVRALKGGAA 76

Query: 71  TALRV--------GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGN 121
                        G  IE +    L+ DD+  MD    RRG+P  +        AI  G 
Sbjct: 77  CVDDALMHQASVVGWCIEWLQAAFLVWDDI--MDESVTRRGQPCWYKSDGVDMNAINDG- 133

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
             L    +I S  K+    +   + +   T +  L  ++ G +  +      E      +
Sbjct: 134 --LVLECQIYSMLKSTASLSQMFRDVTDQTAHGQLIDLITGPIGVVDLSKYTEEAYMPHR 191

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            ++ G L               + +  +       LG  FQ+ DD LDC  D
Sbjct: 192 DVQDGVLHVLPP--------GGERDASKCDEICRLLGQFFQIQDDYLDCYGD 235


>gi|188039903|gb|ACD47128.1| farnesyl pyrophosphate synthetase [Dendrobium huoshanense]
          Length = 174

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 14/167 (8%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           G  IE +  Y L+ DD+  MD+ + RRG+P   +       I A +G++     I     
Sbjct: 1   GWCIEWLQAYFLVLDDI--MDSSHTRRGQPCWFVVPKVGI-IAANDGIILRN-HIPRILN 56

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQKMKTGA 187
              +D      +L L + +       GQMLD+      E             I + KT  
Sbjct: 57  RHFRDKTYYVHLLDLFNEVE-FQTASGQMLDLITTHEGEKDLSKYKMPVYNRIVQYKTAY 115

Query: 188 L-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                      +MA  + +    ++     +G  FQ+ DD LDC  D
Sbjct: 116 YSFYLPVACALLMAGETLDNYVDVKRVLVEMGTYFQVQDDYLDCFGD 162


>gi|30984142|dbj|BAC53873.2| farnesyl pyrophosphate synthase [Phaseolus lunatus]
          Length = 243

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 18/180 (10%)

Query: 67  VNHLTALRVGAA----IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +    + + +A    IE +  Y L+ DD+  MDN + RRG+P           I A +G
Sbjct: 3   ADPEDEIFLASALGWCIEWLQAYFLVLDDI--MDNSHTRRGQPCWFRVPKVGM-IAANDG 59

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV----- 177
           +L     I    K   +       +L L + +       GQM+D+      E  +     
Sbjct: 60  VLLRN-HIPRILKKHFRGKPYYVDLLDLFNEVE-FQTASGQMIDLITTLQGEKDLSKYTL 117

Query: 178 ---FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                I + KT             +MA  + +    ++     +G  FQ+ DD LDC  D
Sbjct: 118 TLHRRIVQYKTAYYSFYLPVACALLMAGDNLDNHVDVKNILVEMGTYFQVQDDYLDCFGD 177


>gi|113475604|ref|YP_721665.1| IdsA [Trichodesmium erythraeum IMS101]
 gi|110166652|gb|ABG51192.1| IdsA [Trichodesmium erythraeum IMS101]
          Length = 101

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
            +R  +               +    A+E  H   LIHDD+ +      RRGK T+H   
Sbjct: 1   MLRPTMCISAGRAVGGMGDKTMATATALELYHNAFLIHDDIEN--GSESRRGKETLHQSI 58

Query: 112 DEVTAIIAGNGLLTYAFEII 131
               AI AG+     A  ++
Sbjct: 59  GMARAINAGDATNILAVGML 78


>gi|254367578|ref|ZP_04983601.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica 257]
 gi|134253391|gb|EBA52485.1| octaprenyl-diphosphate synthase [Francisella tularensis subsp.
           holarctica 257]
          Length = 203

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM 199
           DN++   +L+   N   +G +  Q+L+ ++  + E +   +   KT  L   ACE   ++
Sbjct: 6   DNMQIMQILADATNKISEGEVL-QLLNARNSELSEEEYIKVIYCKTAKLFEAACELAGLI 64

Query: 200 AHASQNEKE---RLRCFGENLGIIFQLADDLLDCEEDLP 235
           +   Q+  +   R++ +G  LG  FQ+ADD+LD   D  
Sbjct: 65  SIDKQDYTKYQGRIKNYGVYLGNAFQIADDVLDYVSDAE 103


>gi|110590636|pdb|2HER|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Zoledronate
 gi|110590637|pdb|2HER|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Zoledronate
 gi|122921291|pdb|2O1O|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Risedronate.
 gi|122921292|pdb|2O1O|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Risedronate.
 gi|149243603|pdb|2Q58|A Chain A, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Zoledronate
 gi|149243604|pdb|2Q58|B Chain B, Cryptosporidium Parvum Putative Polyprenyl Pyrophosphate
           Synthase (Cgd4_2550) In Complex With Zoledronate
          Length = 368

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 16/200 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           I Y +  GK IR  ++   +SL     N+   +   +G  +E I    LI DD+  MD+G
Sbjct: 64  IDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--MDSG 121

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG P  +I + +  AI     L   +  +I    +   ++I  +  +   +N  +  
Sbjct: 122 KFRRGAPCWYIVHGQSNAINDIFFLKMLSLSLIFELSSVFGNDIVMK--IQKIYNESIFF 179

Query: 159 MLGGQMLDIQDEFIDE-----TQVFMIQKMKTG-ALMCFACESGAIMA--HASQNEKERL 210
            + GQ LD+    + +      + F + +MKT           G  ++    S  +   +
Sbjct: 180 TVLGQHLDLSYFDLSKADKISERYFSMVEMKTSRYTFYMPVFFGLTLSEIQVSSAQLNLI 239

Query: 211 RCFGENLGIIFQLADDLLDC 230
                 LG  +Q+ +D+ D 
Sbjct: 240 EAILYKLGEFYQVHNDVSDY 259


>gi|66357330|ref|XP_625843.1| farnesyl pyrophosphate synthase [Cryptosporidium parvum Iowa II]
 gi|46226968|gb|EAK87934.1| putative farnesyl pyrophosphate synthase [Cryptosporidium parvum
           Iowa II]
          Length = 384

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 16/200 (8%)

Query: 43  IRYALLGGKKIRSFLVTECASLF----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           I Y +  GK IR  ++   +SL     N+   +   +G  +E I    LI DD+  MD+G
Sbjct: 80  IDYNVKKGKHIRGKILVLISSLSSAYSNIKRDSIYLLGWVVEAIQALILIADDI--MDSG 137

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
             RRG P  +I + +  AI     L   +  +I    +   ++I  +  +   +N  +  
Sbjct: 138 KFRRGAPCWYIVHGQSNAINDIFFLKMLSLSLIFELSSVFGNDIVMK--IQKIYNESIFF 195

Query: 159 MLGGQMLDIQDEFIDE-----TQVFMIQKMKTG-ALMCFACESGAIMA--HASQNEKERL 210
            + GQ LD+    + +      + F + +MKT           G  ++    S  +   +
Sbjct: 196 TVLGQHLDLSYFDLSKADKISERYFSMVEMKTSRYTFYMPVFFGLTLSEIQVSSAQLNLI 255

Query: 211 RCFGENLGIIFQLADDLLDC 230
                 LG  +Q+ +D+ D 
Sbjct: 256 EAILYKLGEFYQVHNDVSDY 275


>gi|296818997|ref|XP_002849789.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
 gi|238840242|gb|EEQ29904.1| geranylgeranyl pyrophosphate synthase [Arthroderma otae CBS 113480]
          Length = 618

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 70/215 (32%), Gaps = 19/215 (8%)

Query: 15  RIDTILDDL-LLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTA 72
           R ++ L D     T + +    +D +L+  +Y A L  K   + L+        +     
Sbjct: 309 RTNSTLKDQGAPHTLNEIIKPSDDIVLAPYKYIASLPSKNTLAALIDALNLWLKIPQPIL 368

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
             +    + +H      DD+   DN  +RRGKP+ H+ Y     I + N +    F  +S
Sbjct: 369 STIKKIADMLHHA---LDDIE--DNSKLRRGKPSTHLIYGAAQTINSANYVFVNTFAELS 423

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFA 192
           +        I    + +        G                 +  M+   KTGAL    
Sbjct: 424 NLSNAAASAIYIDEVQNSF-----CGQASDLHWKYHSCCPTVEEYMMMIDNKTGALFRLC 478

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                  + A       L  +       +Q+ DD 
Sbjct: 479 VRLMQAESAAPNKFVTLLGRY-------YQIRDDY 506


>gi|310789778|gb|EFQ25311.1| polyprenyl synthetase [Glomerella graminicola M1.001]
          Length = 742

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 27/224 (12%)

Query: 21  DDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAI 79
           ++ L           ++ +L+  +Y   +  K IR   +        V       +   +
Sbjct: 428 EETLAVKYPEDVKCRSELVLAPYKYLTSMPSKGIRELFIRALNWWLKVPDDKLACIQDVV 487

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
             +H  SL+ DD+   D   +RRG+P+ H  Y     I + N +   AF  + S      
Sbjct: 488 SYLHQSSLMLDDIE--DGSKLRRGQPSTHAVYGIGQTINSANFVFVQAFARMQSLGHG-- 543

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACES 195
              R++ +      +  + +  GQ  D+  +         + FM+   KTG L       
Sbjct: 544 ---RAEAIDIFIDEV--ENLHKGQSYDLFWKDQVHCPSVDEYFMMIDNKTGGLFRLCVRL 598

Query: 196 GAIMAHA------SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
               A        S+   +RL  +       FQ+ DD  +   D
Sbjct: 599 MEFFATGSTRGISSEFFVKRLSRY-------FQIRDDYQNLMSD 635


>gi|149032544|gb|EDL87422.1| geranylgeranyl diphosphate synthase 1, isoform CRA_b [Rattus
           norvegicus]
          Length = 153

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 12/150 (8%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           LL   +Y L L GK++R+ L         V       +    E +H  SL+ DD+   D+
Sbjct: 12  LLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIE--DS 69

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +RRG P  H  Y   + I + N +     E + +        + ++ +L L    GL 
Sbjct: 70  SKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL- 128

Query: 158 GMLGGQMLDIQDEFI--DETQVFMIQKMKT 185
                  +  +D +    E +   +   KT
Sbjct: 129 ------DIYWRDTYTCPTEEEYKAMVLQKT 152


>gi|145641599|ref|ZP_01797176.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           R3021]
 gi|145273646|gb|EDK13515.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
           22.4-21]
          Length = 144

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 159 MLGGQMLDIQDEF--IDETQVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFG 214
           M  GQ LD+  E   I  +++ +I + KTGAL+  A + G I +     +  ++ L  + 
Sbjct: 1   MCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQSLTQYA 60

Query: 215 ENLGIIFQLADDLLDCEEDLP 235
           E +G+ FQ+ DD+LD E D  
Sbjct: 61  EAIGLAFQVQDDILDIEGDSA 81


>gi|297805334|ref|XP_002870551.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316387|gb|EFH46810.1| hypothetical protein ARALYDRAFT_915906 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 189

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFID-----ETQVFMIQKMKTGALMCFACESGAIMAHA 202
            S   +   +G++ GQ+ D+  E ++       ++ +I   KT AL+  A   G IM   
Sbjct: 16  RSREDDSWTKGLVAGQVTDLSSERLNPHDAGLERLELIHLHKTAALLEEAAILGVIMGDG 75

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           ++ E E+LR +   + ++FQ+ DD+LD     EDL K
Sbjct: 76  TEEEIEKLRKYARCIRLLFQVVDDILDVTESTEDLGK 112


>gi|294658024|ref|XP_460338.2| DEHA2E23870p [Debaryomyces hansenii CBS767]
 gi|199433130|emb|CAG88623.2| DEHA2E23870p [Debaryomyces hansenii]
          Length = 346

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 71/199 (35%), Gaps = 27/199 (13%)

Query: 53  IRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           IR+  +     L+    +H    ++G  I   H  SL+ DD+   D+   RRG PT H  
Sbjct: 40  IRATFLNAFNDLYYQIEDHKLLDKIGEIISIFHNSSLLIDDIE--DDSSFRRGLPTAHTL 97

Query: 111 YDEVTAIIAGNGLLTYAFE-----------------IISSPKTQLKDNIRSQLMLSLTHN 153
           Y     I  GN +   A +                 +     T     I    ML+L H 
Sbjct: 98  YGTPLTINCGNLMYFIALQKAQNELPMYYNKIHDGDVDVKSLTYQISQILVDEMLNLHHG 157

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA--HASQNEKERLR 211
            GL          IQ+   +  +   +   KTG L   + +   + +    S +      
Sbjct: 158 QGLDIYWRDSGDYIQNHLPEIDEYLKMVMNKTGGLFRLSVKLLEVFSPTFKSTSVIP--- 214

Query: 212 CFGENLGIIFQLADDLLDC 230
                LGII+Q+ DD L+ 
Sbjct: 215 -LANLLGIIYQIRDDYLNL 232


>gi|1523990|emb|CAA65643.1| farnesyl pyrophosphate synthetase [Claviceps purpurea]
          Length = 211

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 69/200 (34%), Gaps = 21/200 (10%)

Query: 49  GGKKIRSFLV-----TECAS-LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRR 102
           GGK  R   V           L    +  A  +G   E +  + L+ DD+  MD    RR
Sbjct: 1   GGKCNRGMSVPDSVSLLLGRPLQEEEYFHAATLGWMTELLQAFFLVSDDI--MDGSITRR 58

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
            KP  H Q      I   +  L  +  I +  K   + +     ML L H    Q  L G
Sbjct: 59  RKPCWHRQDGVGM-IAINDAFLIES-AIYALLKKYFRSHPAYVDMLELFHEATFQAEL-G 115

Query: 163 QMLDIQDEFIDETQ--------VFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRC 212
           Q+ D+    +D+             I   KT     +   + A+  +  A+    +    
Sbjct: 116 QLCDLITGPVDKVDLGNFSMDKYRFIVIYKTAYYSFYLPVALALHQLNLATPRNLKVAED 175

Query: 213 FGENLGIIFQLADDLLDCEE 232
               LG  FQ+ DD LD   
Sbjct: 176 ILIPLGEYFQVQDDYLDNFG 195


>gi|320037302|gb|EFW19239.1| geranylgeranyl pyrophosphate synthase [Coccidioides posadasii str.
           Silveira]
          Length = 731

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 18/216 (8%)

Query: 19  ILDDLL-LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            L D++ L    ++    +D +L   RY   L  K  R   +    +   V   +A  + 
Sbjct: 408 ALADVVSLAVDLNLPELSDDVVLQPYRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAKMIK 467

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           + ++ +H  SL+ DD+   D+  +RRG+P+ H  Y     I +       A  + +    
Sbjct: 468 SIVKMLHSASLMLDDIE--DDSPLRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGN 525

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFA 192
                I  + M         Q +  GQ  D+           ++   +  MKTG L    
Sbjct: 526 PSCLRIFIEEM---------QQLHVGQSYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRML 576

Query: 193 CESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDL 227
                  +   +    + L      +G  FQ+ DD 
Sbjct: 577 TRLMVAESPVREKVSDDALNLLSCLVGRFFQIRDDY 612


>gi|126460364|ref|YP_001056642.1| polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126250085|gb|ABO09176.1| Polyprenyl synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 261

 Score = 79.4 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 19/161 (11%)

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               L   A +E +H  SL+ DD+  MD    RRG  T    Y +  AI+A + L+  + 
Sbjct: 65  DPRILEAAAIVELLHVVSLLQDDV--MDQHDQRRGIKTPRAMYGDGRAIVASDWLIAESI 122

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
           ++  +    +   +              Q +  GQ LD++ E     +       KT  L
Sbjct: 123 KMAVNLGADVVTYL----------ADVAQRLSVGQALDLEGERDKAAE------FKTAPL 166

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           +  A     ++    +   E  +  G  LGI++Q +DD  D
Sbjct: 167 IEAALVMPLVILG-RRELIETAKKLGTKLGILYQYSDDYSD 206


>gi|303314115|ref|XP_003067066.1| polyprenyl synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106734|gb|EER24921.1| polyprenyl synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 731

 Score = 79.4 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 18/216 (8%)

Query: 19  ILDDLL-LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
            L D++ L    ++    +D +L   RY   L  K  R   +    +   V   +A  + 
Sbjct: 408 ALADVVSLAVDLNLPELSDDVVLQPYRYLTSLPSKGFRDQAIDSLNTWLKVPQKSAKMIK 467

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
           + ++ +H  SL+ DD+   D+  +RRG+P+ H  Y     I +       A  + +    
Sbjct: 468 SIVKMLHSASLMLDDIE--DDSPLRRGRPSTHNIYGTAQTINSATYQYVKATGMATELGN 525

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFA 192
                I  + M         Q +  GQ  D+           ++   +  MKTG L    
Sbjct: 526 PSCLRIFIEEM---------QQLHVGQSYDLYWTHNTLCPSVSEYLKMVDMKTGGLFRML 576

Query: 193 CESGAIMAHASQNEK-ERLRCFGENLGIIFQLADDL 227
                  +   +    + L      +G  FQ+ DD 
Sbjct: 577 TRLMVAESPVREKVSDDALNLLSCLVGRFFQIRDDY 612


>gi|13022122|gb|AAK11650.1| unknown [Tolypothrix sp. PCC 7601]
          Length = 69

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
           E ID T +  I   KTGAL+  +  SGA++  AS    +RL  +  ++G+ FQ+ D++LD
Sbjct: 4   ENIDITTLDYIHTHKTGALLETSVLSGALLTGASDAVLQRLSVYAHHIGLAFQIVDNVLD 63

Query: 230 CE 231
             
Sbjct: 64  IT 65


>gi|159124434|gb|EDP49552.1| geranylgeranyl diphosphate synthase, putative [Aspergillus
           fumigatus A1163]
          Length = 787

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 18/210 (8%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           +            L   I Y   +  K +RS ++        V+  +  ++   ++ +H 
Sbjct: 473 ELDHSWHKPARTALQGPIHYICSMPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLHN 532

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SLI DD+   DN   RRG+P  H  +    AI + N +   A ++    +     +I  
Sbjct: 533 ASLILDDIE--DNSPKRRGRPATHTIFGHSQAINSANFMFVQAVQVARQFRNPNVVDILL 590

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMA 200
           + + +L           GQ  D+  ++       ++   +   KTG L         + A
Sbjct: 591 EELENL---------HLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGGLFRLLLRL--MQA 639

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
                 +  L       G  FQ+ DD ++ 
Sbjct: 640 EKKGTTEVDLDRLTVLFGRFFQIRDDYMNL 669


>gi|70992035|ref|XP_750866.1| geranylgeranyl diphosphate synthase [Aspergillus fumigatus Af293]
 gi|66848499|gb|EAL88828.1| geranylgeranyl diphosphate synthase, putative [Aspergillus
           fumigatus Af293]
          Length = 787

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 18/210 (8%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           +            L   I Y   +  K +RS ++        V+  +  ++   ++ +H 
Sbjct: 473 ELDHSWHKPARTALQGPIHYICSMPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLHN 532

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            SLI DD+   DN   RRG+P  H  +    AI + N +   A ++    +     +I  
Sbjct: 533 ASLILDDIE--DNSPKRRGRPATHTIFGHSQAINSANFMFVQAVQVARQFRNPNVVDILL 590

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMA 200
           + + +L           GQ  D+  ++       ++   +   KTG L         + A
Sbjct: 591 EELENL---------HLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGGLFRLLLRL--MQA 639

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDC 230
                 +  L       G  FQ+ DD ++ 
Sbjct: 640 EKKGTTEVDLDRLTVLFGRFFQIRDDYMNL 669


>gi|66800205|ref|XP_629028.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum
           AX4]
 gi|74850574|sp|Q54BK1|GGPPS_DICDI RecName: Full=Geranylgeranyl pyrophosphate synthase; Short=GGPP
           synthase; Short=GGPPSase; AltName: Full=(2E,6E)-farnesyl
           diphosphate synthase; AltName:
           Full=Dimethylallyltranstransferase; AltName:
           Full=Farnesyl diphosphate synthase; AltName:
           Full=Farnesyltranstransferase; AltName:
           Full=Geranylgeranyl diphosphate synthase; AltName:
           Full=Geranyltranstransferase
 gi|60462385|gb|EAL60606.1| geranylgeranyl diphosphate synthase 1 [Dictyostelium discoideum
           AX4]
          Length = 303

 Score = 79.1 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 76/207 (36%), Gaps = 16/207 (7%)

Query: 29  SHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           S+   + + +L+    Y     GK  R+ L+        V       +   I+ +H  SL
Sbjct: 9   SYPLDKSDFKLIEPYTYICESSGKGFRNALIKSFDYWLKVGDEKVQDISKVIQGLHGASL 68

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+   DN  +RRGKP  H  Y     I + N +     +  +         I  + +
Sbjct: 69  LIDDIE--DNSKLRRGKPVAHSIYGIPQTINSANFVYFLIMDQCNKLGDPKATTIFIEEL 126

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
           + L           G  +  +D      E +   +   KTG L           +  + N
Sbjct: 127 IRLHRG-------QGYDIFWRDTNTSPSEQEYMNMVNEKTGGLFRLGLRLLQAFSDNNTN 179

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEE 232
             + +    E+LG+ +Q+ DDL++   
Sbjct: 180 YIDLV----EDLGMYYQIRDDLINLVS 202


>gi|189196102|ref|XP_001934389.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187980268|gb|EDU46894.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 344

 Score = 78.7 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 80/220 (36%), Gaps = 22/220 (10%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNV 67
           L +    + + +D +   + + ++  +   + +A  Y + L  K +RS L+      F +
Sbjct: 64  LAKKVDHVTSKMDGIAQPSLTLLKAPYP--IDAACSYMVSLPSKGVRSTLIYALNQWFQI 121

Query: 68  NHLTALRVGAAIECIHCYSLI-HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++     +      +H  S I HD     D   +RR KP  H  +    +I +   L   
Sbjct: 122 SNRHVNLIKEITSMLHNSSFILHD---IQDQSPLRREKPAAHTIFGTAQSINSSTYLFVR 178

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQK 182
           A +++S    +       +          LQ M  GQ  D+   F      E + F +  
Sbjct: 179 AMQMVSDNFNRAVQRSFLE---------ILQRMHIGQNYDLHWRFHLICPTEDEYFEMVD 229

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            KTG +        A  + +   +++    F    G  FQ
Sbjct: 230 QKTGCMFEVLLLLMA--SKSRHAKEQSFSSFLRIFGRYFQ 267


>gi|121717308|ref|XP_001276070.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
 gi|119404227|gb|EAW14644.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
          Length = 718

 Score = 78.7 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 22/218 (10%)

Query: 19  ILDDLLLQTAS-HMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVG 76
           +L+D++    +  +    +  +L   RY   L  K  R   +        V   +   + 
Sbjct: 395 VLEDMVQLARTCDLPDLSDTVILQPYRYLTSLPSKGFRDQAIDSINKWLKVPPKSVKMIK 454

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             ++ +H  SL+ DDL   DN  +RRGKP+ H  Y     + +       A +I +  + 
Sbjct: 455 DVVKMLHSASLMLDDLE--DNSPLRRGKPSTHSIYGMAQTVNSATYQYITATDITAQLQN 512

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFA 192
               +I  + +         Q +  GQ  D+            +   +  MKTG L    
Sbjct: 513 SETFHIFVEEL---------QQLHVGQSYDLYWTHNTLCPTIAEYLKMVDMKTGGLFRML 563

Query: 193 CESGAIMAHASQNEK---ERLRCFGENLGIIFQLADDL 227
                ++A +   +K     +  F   +G  FQ+ DD 
Sbjct: 564 TRM--MIAESPVVDKVPNSDMNLFSCLIGRFFQIRDDY 599


>gi|307203134|gb|EFN82314.1| Farnesyl pyrophosphate synthetase [Harpegnathos saltator]
          Length = 402

 Score = 78.3 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 72/231 (31%), Gaps = 21/231 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHL------- 70
            I+ D+ + +         + L   + Y + GGK  R+  +     +             
Sbjct: 74  DIVRDIAIASEELNLPDVTEWLTKVLEYNVPGGKNTRALTLLYAYQMLTPADRMTRENIY 133

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +   +E +  + LI DD+   D   IRR +   +   +   A I    ++      
Sbjct: 134 LARILAWCMELLQGFLLILDDIE--DRSLIRRKQLCWYRHENVGLAAINDAVMIENVMYY 191

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD-------EFIDETQVFMIQKM 183
           +   +   K       +L     I +   L GQ L+  +       +     +   I   
Sbjct: 192 L--LRKHFKGRECYIDILETFQEI-MMKTLMGQCLEFTNFGKTLDLDRFTMDRYDGIAYY 248

Query: 184 KTGA-LMCFACESGAIMAH-ASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           KT               A   S+   E  R     +G  +Q+ DD L C  
Sbjct: 249 KTAYYTFVLPMSVAMHFAGIKSRELFEEARTILTKIGHFYQIQDDYLSCYG 299


>gi|32527731|gb|AAP86267.1| Ac2-125 [Rattus norvegicus]
          Length = 879

 Score = 78.3 bits (192), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 81/247 (32%), Gaps = 28/247 (11%)

Query: 1   MNGGLPSKL--QENS---KRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG     +  QE     +    I+  L      H +      R+   + Y  +GGK  R
Sbjct: 68  MNGDQKLDVHNQEKQNFIQHFSQIVKVLTEDELGHPEKGDAITRIKEVLEYNTVGGKYNR 127

Query: 55  SFLVTECA-SLFNVNHLTA------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V +    L       A      L VG  +E +  + L+ DD+  MD+ + RRG+   
Sbjct: 128 GLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDI--MDSSHTRRGQICW 185

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + +          + LL  A  I    K   ++      +L L      Q  + GQ LD+
Sbjct: 186 YQKPGIGL-DAINDALLLEA-AIYRLLKFYCREQPYYLNLLELFLQSSYQTEI-GQTLDL 242

Query: 168 QDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENL 217
                         E +   I K KT          +   MA    + E          +
Sbjct: 243 ITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEM 302

Query: 218 GIIFQLA 224
           G  FQ+ 
Sbjct: 303 GEFFQIQ 309


>gi|13383245|dbj|BAB39473.1| putative GGPP synthase 2 [Metaplexis japonica]
          Length = 128

 Score = 78.3 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 4/127 (3%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKPT H  Y E  A++AG+ LL +AFE I +   +         +L    ++ +
Sbjct: 1   NDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIVTCHKRGLILNNLLELLKNWLSVLV 60

Query: 157 Q-GMLGGQML---DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           Q G+L G++L     +    D   +      +       +   GAI+  A+  +  +LR 
Sbjct: 61  QKGLLQGRLLIFAPKESLMSDWNILSSYICTRQQLYWRGSVVLGAILGGANDVQISKLRK 120

Query: 213 FGENLGI 219
           F   +G+
Sbjct: 121 FARCIGL 127


>gi|251795064|ref|YP_003009795.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
 gi|247542690|gb|ACS99708.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
          Length = 306

 Score = 78.3 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 23/203 (11%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
            H +    ++   ++R+ L         L      +F  +     R  AA+E     S I
Sbjct: 27  GHARAFIREKQAESMRFGL---------LTVLHYRMFGGDSGQIYRAAAAVELFILASDI 77

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNIRSQLM 147
            DDL   D           H  + +V    A       +F ++S     +L+ +    L 
Sbjct: 78  LDDLQDGDAP---------HQAWSQV--PPAAAMQAAASFMVLSQQAVLELEFDQVLLLR 126

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           ++   N  L     GQMLD+ +   DE     + + K+ AL+ FAC +G ++A   +   
Sbjct: 127 VARMMNGQLLKAANGQMLDLMNAVTDEDSYLAMVQHKSAALIVFACMTGVMLAG--REWH 184

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
             +  + E +G+  Q+ +D+ D 
Sbjct: 185 PVVAEYAEEVGMAAQIKNDIKDL 207


>gi|317137331|ref|XP_001727659.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
          Length = 371

 Score = 78.3 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 49/147 (33%), Gaps = 8/147 (5%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DDL   D   +RRGKP  H+ Y     I +    L   F  +    +    
Sbjct: 119 ILHQSSLMFDDLE--DESQLRRGKPATHMLYGPAQTINSAVYALVNTFSEVQRLDSSETT 176

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I    + +L       G                 +  M+   KTG L           +
Sbjct: 177 EIFIDELQNL-----HCGQSFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQAKS 231

Query: 201 HASQNEKERLRCFGENLGIIFQLADDL 227
            +S    E L  F   LG  FQ+ DD 
Sbjct: 232 ISSGPHLE-LTHFVSLLGRFFQIRDDY 257


>gi|83770687|dbj|BAE60820.1| unnamed protein product [Aspergillus oryzae]
          Length = 362

 Score = 78.3 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 49/147 (33%), Gaps = 8/147 (5%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DDL   D   +RRGKP  H+ Y     I +    L   F  +    +    
Sbjct: 110 ILHQSSLMFDDLE--DESQLRRGKPATHMLYGPAQTINSAVYALVNTFSEVQRLDSSETT 167

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I    + +L       G                 +  M+   KTG L           +
Sbjct: 168 EIFIDELQNL-----HCGQSFDLYWKYHGHIPTVEEYMMMIDHKTGGLFRLCVRLMQAKS 222

Query: 201 HASQNEKERLRCFGENLGIIFQLADDL 227
            +S    E L  F   LG  FQ+ DD 
Sbjct: 223 ISSGPHLE-LTHFVSLLGRFFQIRDDY 248


>gi|154285144|ref|XP_001543367.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1]
 gi|150407008|gb|EDN02549.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus NAm1]
          Length = 347

 Score = 77.9 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 86/248 (34%), Gaps = 34/248 (13%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LV 58
           + N    +++   L+   + H     + +   +    +I     GGK  R        L 
Sbjct: 4   RTNRADFESVFPSLVKDLSDHAVQYGLPSVAREWFEKSINANTPGGKLNRGLSVPDTGLA 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                L +        +G   E +  + L+ DD+  MD+   RRG+P  + + +      
Sbjct: 64  LLEKPLNDEQFKDLCTLGWMTEFLQAFFLVSDDI--MDSSVTRRGEPCWYRRPN------ 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLM----LSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            G   +  AF + S     LK + RS       L L H +  Q  L GQ+ D+     D 
Sbjct: 116 VGMIAINDAFMLESVIYVLLKKHFRSHPAYVDFLELFHEVTFQTEL-GQLCDLLTAPEDN 174

Query: 175 TQVF--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLA 224
             +          I   KT     +   + A+  +  A+ +   +       LG  FQ  
Sbjct: 175 VDLDNFSMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPSNLRQAHDILIPLGQYFQAQ 234

Query: 225 DDLLDCEE 232
           DD LD   
Sbjct: 235 DDYLDVFG 242


>gi|240277524|gb|EER41032.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus H143]
 gi|325093604|gb|EGC46914.1| farnesyl pyrophosphate synthetase [Ajellomyces capsulatus H88]
          Length = 347

 Score = 77.9 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 86/248 (34%), Gaps = 34/248 (13%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LV 58
           + N    +++   L+   + H     + +   +    +I     GGK  R        L 
Sbjct: 4   RTNRADFESVFPSLVKDLSDHAVQYGLPSVAREWFEKSINANTPGGKLNRGLSVPDTGLA 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                L +        +G   E +  + L+ DD+  MD+   RRG+P  + + +      
Sbjct: 64  LLEKPLNDEQFKNLCTLGWMTEFLQAFFLVSDDI--MDSSVTRRGEPCWYRRPN------ 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLM----LSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            G   +  AF + S     LK + RS       L L H +  Q  L GQ+ D+     D 
Sbjct: 116 VGMIAINDAFMLESVIYVLLKKHFRSHPAYVDFLELFHEVTFQTEL-GQLCDLLTAPEDN 174

Query: 175 TQVF--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLA 224
             +          I   KT     +   + A+  +  A+ +   +       LG  FQ  
Sbjct: 175 VDLDNFSMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPSNLRQAHDILIPLGQYFQAQ 234

Query: 225 DDLLDCEE 232
           DD LD   
Sbjct: 235 DDYLDVFG 242


>gi|289806033|ref|ZP_06536662.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 137

 Score = 77.9 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLL 228
           E I    +  I + KTGAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+L
Sbjct: 5   ERITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDIL 64

Query: 229 DCEED---LPKK 237
           D   D   L K+
Sbjct: 65  DVVGDTATLGKR 76


>gi|290976635|ref|XP_002671045.1| predicted protein [Naegleria gruberi]
 gi|284084610|gb|EFC38301.1| predicted protein [Naegleria gruberi]
          Length = 226

 Score = 77.9 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 9/162 (5%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK  RS L+      F ++      + + I+ +H  SL+ DD+   DN  +RRGKP  H+
Sbjct: 31  GKGFRSKLIDAFNEWFKLSEDELNVIKSIIDKLHNASLLVDDIE--DNSKLRRGKPCAHL 88

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPK-TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            Y     I   N +   A + I     +       S+ +      + L     G  +  +
Sbjct: 89  IYGTPATINCANYVYFEALKDIQKLNSSFSDQQSFSEAITVFMDELLLLHEGQGCDIYWR 148

Query: 169 DEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           D  I   E    ++ + KTG L       G  +  AS  +K+
Sbjct: 149 DNGICPSEQDYLVMVQNKTGGLF----RLGVGLMKASSTQKD 186


>gi|238504512|ref|XP_002383487.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
 gi|220690958|gb|EED47307.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus flavus
           NRRL3357]
          Length = 368

 Score = 77.9 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 19/187 (10%)

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R +L        N++  +A  +   +  +   SL+ DD+   D   +RRG P  H++Y 
Sbjct: 98  LRPWL--------NISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAAHVKYG 147

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
               I +   ++     I+S  +T L+       +LS        G           +  
Sbjct: 148 LSQTINSTTYIIAK---IVSDVQTHLRPE--CAKVLSEELQTLTLGQALDLNWTFNKKCP 202

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              +  ++   KTG           I A+A+ N++  LR     LG  +Q+ DD  +   
Sbjct: 203 SVNEYLVMIDHKTGGFFRLMLRIMEIEANATPNDE--LRHLITLLGRYYQIRDDYQNLAS 260

Query: 233 DL--PKK 237
           D    KK
Sbjct: 261 DEYTAKK 267


>gi|225556978|gb|EEH05265.1| farnesyl-pyrophosphate synthetase [Ajellomyces capsulatus G186AR]
          Length = 347

 Score = 77.9 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 86/248 (34%), Gaps = 34/248 (13%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LV 58
           + N    +++   L+   + H     + +   +    +I     GGK  R        L 
Sbjct: 4   RTNRADFESVFPSLVKDLSDHAVQYGLPSVAREWFEKSINANTPGGKLNRGLSVPDTGLA 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                L +        +G   E +  + L+ DD+  MD+   RRG+P  + + +      
Sbjct: 64  LLEKPLNDEQFKDLCTLGWMTEFLQAFFLVSDDI--MDSSVTRRGEPCWYRRPN------ 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLM----LSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            G   +  AF + S     LK + RS       L L H +  Q  L GQ+ D+     D 
Sbjct: 116 VGMIAINDAFMLESVIYVLLKKHFRSHPAYVDFLELFHEVTFQTEL-GQLCDLLTAPEDN 174

Query: 175 TQVF--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLA 224
             +          I   KT     +   + A+  +  A+ +   +       LG  FQ  
Sbjct: 175 VDLDNFSMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPSNLRQAHDILIPLGQYFQAQ 234

Query: 225 DDLLDCEE 232
           DD LD   
Sbjct: 235 DDYLDVFG 242


>gi|328863633|gb|EGG12732.1| hypothetical protein MELLADRAFT_32660 [Melampsora larici-populina
           98AG31]
          Length = 346

 Score = 77.5 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 16/194 (8%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K++ + +       + V       +   +   H  SL+ DD+   D+  +R+GKP  H  
Sbjct: 60  KELPAMVTKAFNHWYQVPRPALDIILKIVGPTHAASLLIDDIQ--DDSDLRKGKPVAHTV 117

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           Y     I     ++  A+  IS     LK    + L   +   I       G+ L  +D 
Sbjct: 118 YGVAQTINTATYVVFDAYRNISKLTLFLKSPETTDLGSIIDDEIVALHRGQGKDLYWRDS 177

Query: 171 FI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL-RCFGE--NLGIIFQLAD 225
            I   E +   +   KTGA+     +    ++       E L  CF     +GI+ Q+ +
Sbjct: 178 LICPTEEEYLRMIHNKTGAMFRLPIKLLQALS-----PVESLPDCFSLVNIIGILAQIQN 232

Query: 226 DLL----DCEEDLP 235
           DLL    D  ED  
Sbjct: 233 DLLSLSRDFTEDKG 246


>gi|330796722|ref|XP_003286414.1| polyprenyl synthetase [Dictyostelium purpureum]
 gi|325083609|gb|EGC37057.1| polyprenyl synthetase [Dictyostelium purpureum]
          Length = 298

 Score = 77.5 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 12/197 (6%)

Query: 38  RLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD 96
           +LL    Y     GK  R+ L+        V       +   ++ +H  SL+ DD+   D
Sbjct: 13  QLLEPYSYICESSGKGFRNTLIKSFDFWLKVGDERVKDISQVVQGLHVSSLLIDDIE--D 70

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL 156
           N  +RRGKP  H  Y     I + N +    F   +   +    +I  + ++ L    G 
Sbjct: 71  NSKLRRGKPVAHSIYGIPQTINSANFVYFLIFNDCNRLGSPEATSIFIEEVIRLHRGQGY 130

Query: 157 QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
             +         ++   E +   +   KTG L           +    N  E +    E+
Sbjct: 131 DIL-----WRDTNKSPSEQEYMKMVNEKTGGLFRLGLRLLQCFSENKTNYIELV----ED 181

Query: 217 LGIIFQLADDLLDCEED 233
           LG+ +Q+ DDL++ + +
Sbjct: 182 LGMYYQIRDDLINLDSE 198


>gi|302654819|ref|XP_003019208.1| hypothetical protein TRV_06757 [Trichophyton verrucosum HKI 0517]
 gi|291182916|gb|EFE38563.1| hypothetical protein TRV_06757 [Trichophyton verrucosum HKI 0517]
          Length = 347

 Score = 77.5 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 79/245 (32%), Gaps = 32/245 (13%)

Query: 12  NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LVTE 60
           + +  + +   L+   + H     +     + L   +     GGK  R        L   
Sbjct: 6   SREDFNKVFPALVQDISEHAKEYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L          +G   E +  + L+ DD+  MD+   RRG+P  + +         G
Sbjct: 66  EKPLTEEQFKHLGLLGWMTELLQAFFLVSDDI--MDSSITRRGEPCWYRRPG------VG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
              +  AF + SS    LK + RS      L    +        GQ+ D+     D   +
Sbjct: 118 MIAINDAFMLESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLCDLITAPEDNVDL 177

Query: 178 F--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDL 227
                     I   KT     +   + A+  +  A+ N   +       LG  FQ  DD 
Sbjct: 178 NNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPNNLRQAHDILIPLGQYFQAQDDY 237

Query: 228 LDCEE 232
           LD   
Sbjct: 238 LDVFG 242


>gi|295660371|ref|XP_002790742.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis
           Pb01]
 gi|226281295|gb|EEH36861.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis
           Pb01]
          Length = 346

 Score = 77.5 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 69/199 (34%), Gaps = 20/199 (10%)

Query: 49  GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK  R   V          L +        +G   E +  + L+ DD+  MD  + RRG
Sbjct: 48  GGKLNRGLSVPDTGLALLGKLSDEQFKHLCTLGWLTELLQAFFLVSDDM--MDGSHTRRG 105

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           KP  H +       I  + +L  +  +I   K   + +      L L H +  Q  L GQ
Sbjct: 106 KPCWHRRPGVNLIAINDSFMLESSIYVI--LKKHFRFHPAYVDFLELFHEVSFQTEL-GQ 162

Query: 164 MLDIQDEFIDETQVF--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCF 213
           + D+     D   +          I   KT     +   + A+  +  A+     +    
Sbjct: 163 LCDLLTAPEDNVNLDNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPGNLRQAHDI 222

Query: 214 GENLGIIFQLADDLLDCEE 232
              LG  FQ  DD LD   
Sbjct: 223 LIPLGQYFQAQDDYLDVFG 241


>gi|119499053|ref|XP_001266284.1| farnesyl-pyrophosphate synthetase [Neosartorya fischeri NRRL 181]
 gi|119414448|gb|EAW24387.1| farnesyl-pyrophosphate synthetase [Neosartorya fischeri NRRL 181]
          Length = 347

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 75/230 (32%), Gaps = 16/230 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSF------LVTECASLFNVNHL 70
           T+ +DLL     +   ++  +     I   + GGK  R        L      L +    
Sbjct: 16  TLAEDLLAHAKKYNLPENALKWFEQVINVNVPGGKLNRGLSVPDTGLALLQKPLTDEQFK 75

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
               +G   E +  + L+ DD+  MD+   RRG+P  +        AI     L +  + 
Sbjct: 76  HLSILGWLTELLQAFFLVSDDM--MDSSITRRGQPCWYRHPGVGLIAINDSFMLESGIYV 133

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMKT 185
           I+          +    +   T      G L   +   +D    +     +   I   KT
Sbjct: 134 ILKKHFRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYMFIVTYKT 193

Query: 186 GALMCF--ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                +     +   +  A+    ++       LG  FQ+ DD LD   D
Sbjct: 194 AYYSFYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGD 243


>gi|257079431|ref|ZP_05573792.1| polyprenyl synthetase [Enterococcus faecalis JH1]
 gi|256987461|gb|EEU74763.1| polyprenyl synthetase [Enterococcus faecalis JH1]
          Length = 201

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 152 HNIGLQGMLGG---QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
           +  G++ +L G   QM    D  +           KT  L   +C  GA   H+S+  + 
Sbjct: 15  NAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQR 74

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDLP--KK 237
             +  G ++GI FQ+ DD+LD   D    KK
Sbjct: 75  LAKRIGRHIGIAFQVYDDILDYTADTETLKK 105


>gi|83764459|dbj|BAE54603.1| unnamed protein product [Aspergillus oryzae]
          Length = 358

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R +L        N++  +A  +   +  +   SL+ DD+   D   +RRG P  H++Y 
Sbjct: 88  LRPWL--------NISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAAHVKYG 137

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
               I +          II+   ++++ ++R +    L+    LQ +  GQ LD+   F 
Sbjct: 138 LSQTINSTTY-------IIAKVVSEVQTHLRLECAKVLSEE--LQTLTLGQALDLNWTFN 188

Query: 173 ----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
                  +  ++   KTG           I A+A+ N++  LR     LG  +Q+ DD  
Sbjct: 189 KTCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANATPNDE--LRHLITLLGRYYQIRDDYQ 246

Query: 229 DCEEDL 234
           +   D 
Sbjct: 247 NIASDE 252


>gi|302506172|ref|XP_003015043.1| hypothetical protein ARB_06803 [Arthroderma benhamiae CBS 112371]
 gi|291178614|gb|EFE34403.1| hypothetical protein ARB_06803 [Arthroderma benhamiae CBS 112371]
          Length = 347

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 78/245 (31%), Gaps = 32/245 (13%)

Query: 12  NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LVTE 60
           + +  + +   L+   + H     +     + L   +     GGK  R        L   
Sbjct: 6   SREDFNKVFPALVQDISEHAKEYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L          +G   E +  + L+ DD+  MD+   RRG+P  + +         G
Sbjct: 66  EKPLTEEQFKHLGLLGWMTELLQAFFLVSDDI--MDSSITRRGEPCWYRRPG------VG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
              +  AF + SS    LK + RS      L    +        GQ+ D+     D   +
Sbjct: 118 MIAINDAFMLESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLCDLITAPEDNVDL 177

Query: 178 F--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDL 227
                     I   KT     +   + A+  +  A+     +       LG  FQ  DD 
Sbjct: 178 NNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDY 237

Query: 228 LDCEE 232
           LD   
Sbjct: 238 LDVFG 242


>gi|289613364|emb|CBI59673.1| unnamed protein product [Sordaria macrospora]
          Length = 746

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 77/228 (33%), Gaps = 16/228 (7%)

Query: 8   KLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFN 66
           + +E  + +   LD LL       +    + + +   Y  L+  K +R   +        
Sbjct: 426 EFKEAQRELS--LDSLLPSE----EKLGMEIVNAPFEYTRLMPSKNVRGTFIDALNLWAG 479

Query: 67  VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTY 126
           ++     ++   ++ +H  SL+ DD+   D   +RRG P  H  Y     I + +  +  
Sbjct: 480 LSEEVLGQIKEVVDDLHTASLMFDDVE--DGSELRRGNPAAHAVYGIPQTINSASLAILE 537

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A +           +I  + +  L       G               E++   +   KTG
Sbjct: 538 AVQKAKDLPIPGAVDIALEQLRDL-----HVGQSYDLYWTRHMTCPSESEYLEMVAKKTG 592

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            L         +  H  +  +  +      +GI FQ+ DD  +   D 
Sbjct: 593 GLFLLLSRL--MSEHMPKEVRSLVNDLVTQVGIYFQIRDDYQNLSSDE 638


>gi|326480620|gb|EGE04630.1| farnesyl pyrophosphate synthetase [Trichophyton equinum CBS 127.97]
          Length = 347

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 78/245 (31%), Gaps = 32/245 (13%)

Query: 12  NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LVTE 60
           + +  + +   L+   + H     +     + L   +     GGK  R        L   
Sbjct: 6   SREDFNKVFPALVQDISEHAKQYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L          +G   E +  + L+ DD+  MD+   RRG+P  + +         G
Sbjct: 66  EKPLTEEQFKHLGLLGWMTELLQAFFLVSDDI--MDSSITRRGEPCWYRRPG------VG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
              +  AF + SS    LK + RS      L    +        GQ+ D+     D   +
Sbjct: 118 MIAINDAFMLESSIYVLLKKHFRSHPAYINLVELFHETTFQTELGQLCDLITAPEDNVDL 177

Query: 178 F--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDL 227
                     I   KT     +   + A+  +  A+     +       LG  FQ  DD 
Sbjct: 178 NNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDY 237

Query: 228 LDCEE 232
           LD   
Sbjct: 238 LDVFG 242


>gi|327294855|ref|XP_003232123.1| farnesyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892]
 gi|326466068|gb|EGD91521.1| farnesyl pyrophosphate synthetase [Trichophyton rubrum CBS 118892]
          Length = 347

 Score = 76.7 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 32/245 (13%)

Query: 12  NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LVTE 60
           + +  + +   L+   + H     +     + L   +     GGK  R        L   
Sbjct: 6   SREDFNKVFPALVQDISEHAKEYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L          +G   E +  + L+ DD+  MD+   RRG+P  + +         G
Sbjct: 66  EKPLTEEQFKHLGLLGWMTELLQAFFLVSDDI--MDSSITRRGEPCWYRRPG------VG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
              +  AF + SS    LK + RS      L    +        GQ+ D+     D+  +
Sbjct: 118 MIAINDAFMLESSIYVLLKKHFRSHTAYVDLVELFHEITFQTELGQLCDLITAPEDKVDL 177

Query: 178 F--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDL 227
                     I   KT     +   + A+  +  A+     +       LG  FQ  DD 
Sbjct: 178 NNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDY 237

Query: 228 LDCEE 232
           LD   
Sbjct: 238 LDVFG 242


>gi|239612415|gb|EEQ89402.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis ER-3]
 gi|327355217|gb|EGE84074.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis ATCC
           18188]
          Length = 347

 Score = 76.7 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 83/244 (34%), Gaps = 26/244 (10%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LV 58
           + +    + +   L+   + H     + +   +   +++     GGK  R        L 
Sbjct: 4   RTDRAAFEAVFPSLVKDISDHANQYGLPSIAREWFENSMNANTPGGKLNRGLSVPDTGLA 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                L +        +G   E +  + L+ DD+  MD+   RRG+P  + + +     I
Sbjct: 64  LLEKPLNDEQFKHLCTLGWMTEFLQAFFLVSDDM--MDSSITRRGEPCWYRRPNVGMIAI 121

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
               +L  A  ++   K   + +      L L H +  Q  L GQ+ D+     D   + 
Sbjct: 122 NDAFMLEAAIYVL--LKKHFRSHPAYVDFLELFHEVTFQTEL-GQLCDLLTAPEDNVDLN 178

Query: 179 --------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLL 228
                    I   KT     +     A+  +  A+ +   +       LG  FQ  DD L
Sbjct: 179 NFSMDKFNFIVIYKTAYYSFYLPVVLALHYLQLATPSNLRQAHDILIPLGQYFQAQDDYL 238

Query: 229 DCEE 232
           D   
Sbjct: 239 DVFG 242


>gi|195582416|ref|XP_002081024.1| GD25915 [Drosophila simulans]
 gi|194193033|gb|EDX06609.1| GD25915 [Drosophila simulans]
          Length = 383

 Score = 76.7 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 76/223 (34%), Gaps = 43/223 (19%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS-------LFNVNHL 70
            ++ D+   T ++  +         ++Y +  GKK R  L             L   N  
Sbjct: 93  DLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLVPAQDLTPENIK 152

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
            A  +G  +E +  + +I DD+  MDN   RRG+P  H   +   TAI     +    + 
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYA 210

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
           I+    + L   +    +      I       GQ LD  +    + + F   + KT    
Sbjct: 211 ILKKHFSHLDCYVALMELFHEITYITTC----GQSLDQLNSNYKDAEAFR--QSKT---- 260

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   I+                 +G  FQ+ DD LDC  
Sbjct: 261 --------IL---------------LEMGNFFQVQDDFLDCFG 280


>gi|317138018|ref|XP_001816605.2| geranylgeranyl pyrophosphate synthase [Aspergillus oryzae RIB40]
          Length = 364

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 23/188 (12%)

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R +L        N++  +A  +   +  +   SL+ DD+   D   +RRG P  H++Y 
Sbjct: 88  LRPWL--------NISDRSAAVLTDVMTMLQNSSLMLDDIE--DGSQLRRGAPAAHVKYG 137

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH--NIGLQGMLGGQMLDIQDE 170
               I +   ++     ++S  +T L+  +    +LS+       LQ +  GQ LD+   
Sbjct: 138 LSQTINSTTYIIAK---VVSEVQTHLR--LECAKVLSVLRKLAEELQTLTLGQALDLNWT 192

Query: 171 FI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           F        +  ++   KTG           I A+A+ N++  LR     LG  +Q+ DD
Sbjct: 193 FNKTCPSVNEYLVMIDHKTGGFFRLMLRIMEIEANATPNDE--LRHLITLLGRYYQIRDD 250

Query: 227 LLDCEEDL 234
             +   D 
Sbjct: 251 YQNIASDE 258


>gi|255563600|ref|XP_002522802.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
 gi|223538040|gb|EEF39653.1| farnesyl-pyrophosphate synthetase, putative [Ricinus communis]
          Length = 352

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 73/228 (32%), Gaps = 16/228 (7%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALR 74
            LL   A          L   + Y +  GK  R   V +C               L A  
Sbjct: 18  QLLNDPAFEFTDDSRQWLEHMLDYNVPRGKLYRGLAVIDCYKALKEGEELTGDEILLASV 77

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISS 133
           +G  +E +   +++ DD+  MDN + RRG+P           AI  G  L      I+  
Sbjct: 78  LGWCMEWLQACAVVLDDI--MDNSHTRRGRPCWFRLAKVGLIAINDGILLTNQCHRILRM 135

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE----FIDETQVFMIQKMKTGALM 189
              +    +    + +        G +   +   + E        +    I + K+    
Sbjct: 136 YFREKPYYVDLLDLFNEVEFQSFSGEMIDLITTHKGEKDLSNYSLSLYHRIVEYKSAYYS 195

Query: 190 CF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            +       I+A  +      ++     + I F + DD  DC  D PK
Sbjct: 196 IYLPVACALILAGENLENHAEVKKILIEITIYFSVQDDYQDCFGD-PK 242


>gi|160893233|ref|ZP_02074021.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50]
 gi|156865316|gb|EDO58747.1| hypothetical protein CLOL250_00779 [Clostridium sp. L2-50]
          Length = 127

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 37/61 (60%)

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            Q+  + + KTGAL+  +   GA++A A+++E +++     ++G+ FQ+ DDLLD   D 
Sbjct: 4   DQLHFVYENKTGALIEASMMIGAVLAGATEDELKQVEMIASDIGLAFQIQDDLLDILGDS 63

Query: 235 P 235
            
Sbjct: 64  A 64


>gi|315049457|ref|XP_003174103.1| farnesyl pyrophosphate synthetase [Arthroderma gypseum CBS 118893]
 gi|311342070|gb|EFR01273.1| farnesyl pyrophosphate synthetase [Arthroderma gypseum CBS 118893]
          Length = 347

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 78/245 (31%), Gaps = 32/245 (13%)

Query: 12  NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LVTE 60
           + +  + +   L+   + H     +     + L   +     GGK  R        L   
Sbjct: 6   SREDFNKVFPALVQDISEHSKQYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L          +G   E +  + L+ DD+  MD+   RRG+P  + +         G
Sbjct: 66  EKPLSEEQFKHLGLLGWMTELLQAFFLVSDDI--MDSSITRRGEPCWYRRQG------VG 117

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
              +  AF + SS    LK + RS      L    +        GQ+ D+     D   +
Sbjct: 118 MIAINDAFMLESSIYVLLKKHFRSHPAYIDLVELFHETTFQTELGQLCDLITAPEDNVDL 177

Query: 178 F--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDL 227
                     I   KT     +   + A+  +  A+     +       LG  FQ  DD 
Sbjct: 178 DNFSMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDY 237

Query: 228 LDCEE 232
           LD   
Sbjct: 238 LDVFG 242


>gi|296817039|ref|XP_002848856.1| farnesyl pyrophosphate synthetase [Arthroderma otae CBS 113480]
 gi|238839309|gb|EEQ28971.1| farnesyl pyrophosphate synthetase [Arthroderma otae CBS 113480]
          Length = 347

 Score = 76.4 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 84/243 (34%), Gaps = 28/243 (11%)

Query: 10  QENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF--- 65
           ++ +K    I++D+   +  + +     + L   +     GGK  R   V + A      
Sbjct: 8   EDFNKVFPAIVEDISEHSKQYNIPASALEWLQKNLNENTPGGKLNRGLSVPDTALALLEK 67

Query: 66  --NVNHLTAL-RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             N      L  +G   E +  + L+ DD+  MD+   RRG+P  + +         G  
Sbjct: 68  PLNEEQFKHLGLLGWMTELLQAFFLVSDDI--MDSSITRRGEPCWYRRPG------VGMI 119

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLM---LSLTHNIGLQGMLGGQMLDIQDEFIDETQVF- 178
            +  AF + SS    LK + RS      L    +        GQ+ D+     D   +  
Sbjct: 120 AINDAFMLESSIYVLLKKHFRSHPAYIDLVELFHEITFQTELGQLCDLITAPEDHVDLDN 179

Query: 179 -------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                   I   KT     +   + A+  +  A+     +       LG  FQ  DD LD
Sbjct: 180 FSMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDYLD 239

Query: 230 CEE 232
              
Sbjct: 240 VFG 242


>gi|300707872|ref|XP_002996129.1| hypothetical protein NCER_100832 [Nosema ceranae BRL01]
 gi|239605400|gb|EEQ82458.1| hypothetical protein NCER_100832 [Nosema ceranae BRL01]
          Length = 305

 Score = 76.4 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 36/209 (17%)

Query: 38  RLLSAIRYALLGGKKIR----------SFLVTECASLFNVNHLTALRVGAAIECIHCYSL 87
           ++   I Y + GGK +R          S L                 VG  +E  H   +
Sbjct: 25  KIFEMINYNISGGKNVRFDILSHVTNNSKLCVL--------EEDKFLVGFCMELFHASFI 76

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+  +DN  IRR KP  H+      A+     L++   +++ + K    ++ + + +
Sbjct: 77  LSDDI--VDNSLIRRNKPCFHLSRKMK-ALRDSRFLISLIHKLLKTLKN---NSNKLRKI 130

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQ---VFMIQKMKTGALMCF-ACESGAIMAHAS 203
           +             GQ +D + +  DE        I ++KT +   +     G I+    
Sbjct: 131 IDKCF----YDTCLGQAIDTKHKERDEYTFKMYKTICELKTSSYSVYMPLACGYILGDRD 186

Query: 204 -QNEKERLRCFGENLGIIFQLADDLLDCE 231
                E+L      +G+I+Q+ DD L+  
Sbjct: 187 CPYYLEQLTNL---IGLIYQMNDDYLNFF 212


>gi|63145969|gb|AAY33921.1| GGDP synthase [Xanthophyllomyces dendrorhous]
 gi|63145971|gb|AAY33922.1| GGDP synthase [Xanthophyllomyces dendrorhous]
          Length = 376

 Score = 76.4 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 76/254 (29%), Gaps = 49/254 (19%)

Query: 22  DLLLQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
           ++L         Q +  LL    Y     GK+IRS L+       +V       +   + 
Sbjct: 5   NILTAIPLEFTPQDDIVLLEPYHYLGKNPGKEIRSQLIEAFNYWLDVKKEDLEVIQNVVG 64

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H  SL+ DD+   D+  +RRG P  H+ Y     I   N +   A++ I   +     
Sbjct: 65  MLHTASLLMDDVE--DSSVLRRGSPVAHLIYGIPQTINTANYVYFLAYQEIFKLRPTPIP 122

Query: 141 NIRSQLML-----------------------------------SLTHNIGLQGML---GG 162
                                                      +    +    ML    G
Sbjct: 123 MPVIPPSSASLQSSVSSASSSSSASSENGGTSTPNSQIPFSKDTYLDKVITDEMLSLHRG 182

Query: 163 QMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           Q L++          E +   +   KTG L   A       +    +  + +        
Sbjct: 183 QGLELFWRDSLTCPSEEEYVKMVLGKTGGLFRIAVRLMMAKSECDIDFVQLVNLIS---- 238

Query: 219 IIFQLADDLLDCEE 232
           I FQ+ DD ++ + 
Sbjct: 239 IYFQIRDDYMNLQS 252


>gi|121719090|ref|XP_001276285.1| farnesyl-pyrophosphate synthetase [Aspergillus clavatus NRRL 1]
 gi|119404483|gb|EAW14859.1| farnesyl-pyrophosphate synthetase [Aspergillus clavatus NRRL 1]
          Length = 347

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 77/230 (33%), Gaps = 16/230 (6%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSF------LVTECASLFNVNHL 70
           ++ +DLL     +   ++  +    ++   + GGK  R        L      L +    
Sbjct: 16  SLAEDLLEHARKYNLPENAMKWFEKSLNANVPGGKLNRGLSVPDTGLALLQKPLTDEQFK 75

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFE 129
               +G   E +  + L+ DD+  MD+   RRG+P  +        AI     L +  + 
Sbjct: 76  HLSTLGWLTELLQAFFLVSDDI--MDSSITRRGQPCWYRYPGVGLIAINDSFMLESGIYH 133

Query: 130 IIS---SPKTQLKDNIRSQLMLSLTHNIG-LQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
           I+           D I      +    +G L  ++      +  +     +   I   KT
Sbjct: 134 ILKKHFRSHPAYVDFIELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYMFIVTYKT 193

Query: 186 GALMCF--ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                +     +   +  A+    ++       LG  FQ+ DD LD   D
Sbjct: 194 AYYSFYLPVALALLYLELATPETLKQTHDILIPLGQYFQVQDDYLDAYGD 243


>gi|293353562|ref|XP_001070116.2| PREDICTED: serine/threonine/tyrosine interacting protein [Rattus
           norvegicus]
          Length = 393

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 84/248 (33%), Gaps = 23/248 (9%)

Query: 1   MNGG--LPSKLQENS---KRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRS 55
           MNG   L +  QE     +    I+  L      H +T    RL   +  + +GGK  R 
Sbjct: 54  MNGDQKLDAYNQEKQNFIQHFSQIVKVLTEDELGHPETIT--RLKEVLACSAVGGKFTRG 111

Query: 56  FLVT-ECASLFNV------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
             V      L         N   AL VG  +  +    L+ DD+  M+    R  +   +
Sbjct: 112 LTVVQAFKELLEPRKQDAENLEWALAVGWCVGLLQAXFLMSDDI--MNPSLTRHSQICWY 169

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
            +     AI   + LL  A  I    K   ++   S   ++      L  +   Q     
Sbjct: 170 QKPGIGLAIN--DALLLEA-SIYRLLKFSCREQPYSFCRVTSNRPGRLSLITAPQGHADL 226

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAI--MAHAS-QNEKERLRCFGENLGIIFQLAD 225
                E +   I K KT +L  F     A   +A  S + E          +G  FQ+ D
Sbjct: 227 GRH-TEKRYKSIVKYKTASLYSFYLPITAAVCLAGISGEKEHANAMKILLEMGEFFQVQD 285

Query: 226 DLLDCEED 233
           D LD   D
Sbjct: 286 DSLDPHGD 293


>gi|171185989|ref|YP_001794908.1| polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935201|gb|ACB40462.1| Polyprenyl synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 263

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 30/229 (13%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECAS 63
           LP ++    +R+ T L ++               L  A+RY +   GK +R  L+   + 
Sbjct: 4   LPGEVLAALERVKTHLQNV-------GSDIRPQSLREAVRYYIERPGKLLRPLLLLTFSY 56

Query: 64  LFNVN---HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
             +      L  ++  A +E +H  SL+ DD+  MD    RRG  T    Y +  +I+A 
Sbjct: 57  TLDRRSVLDLRIIQAAAIVELLHVVSLLQDDV--MDKHDERRGAKTPRALYGDGRSIVAS 114

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L+  + +        +      + +  +   + +     GQ LD+             
Sbjct: 115 DWLIAESIKRALQLGPDI-----VKYLADVAQRLSI-----GQALDLDGR------YDEA 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            + KT  L+  +    A++    +   +  +  G+ LG+++Q ADD  D
Sbjct: 159 AEFKTAPLIEASLVLPAMLLG-RREILDSAKKLGQLLGVLYQYADDYSD 206


>gi|14625006|dbj|BAB61883.1| farnesyl diphosphate synthase [Rhodovulum strictum]
          Length = 110

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG PTVH+++DE TA++ G+ L T AFE+++ P       +R  L+ +L    G+ GM
Sbjct: 12  LRRGLPTVHLKWDEGTALLVGDALQTLAFEMLADPACHPDPAVRIDLVAALARASGIDGM 71

Query: 160 LGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACE 194
           + GQ  DI  E     +   ++  +   KTGAL      
Sbjct: 72  VLGQAQDISVETDGRALSLAEITELHANKTGALSAGRPR 110


>gi|325290814|ref|YP_004266995.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966215|gb|ADY56994.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 313

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 12/183 (6%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           LV       +     AL    A+E I   + I DD+   DN  +         +    +A
Sbjct: 49  LVLMNCECVSGKSEIALSGAIAMEFIALAADIFDDIQDQDNDEMP------WRKIPTASA 102

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG--QMLDIQDEFIDE 174
           I     LL   ++ ++     +KD   +  + S+ + +G++  +G   ++L    E I+ 
Sbjct: 103 INLALCLLMLGYQSVAR----IKDRSLAIQICSIFNCMGIRASVGQYQEVLYGISEQIEL 158

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
            Q F + + K+G+L   AC+ G +M  A ++   +L  FG N GI+ Q+++DL D     
Sbjct: 159 DQYFELIRQKSGSLTAAACKIGGVMGRAPESIVLKLEEFGANYGIMNQISNDLNDFTNLS 218

Query: 235 PKK 237
            KK
Sbjct: 219 KKK 221


>gi|318081668|ref|ZP_07988981.1| putative geranylgeranyl pyrophosphate synthase [Streptomyces sp.
           SA3_actF]
          Length = 258

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 40/247 (16%)

Query: 13  SKRIDTILDDLLL-------QTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
           S  +  +L+ LL        +  +    Q    L +  R    GG+++RS  V     + 
Sbjct: 19  SAAVAEVLERLLAPRVAEAARLDASFGRQVAQWLAATTR---GGGRRLRSAFVWWGLRVA 75

Query: 66  -----NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---------- 110
                      AL VGAA+E +   +L+ DD+  MDN  +RRG+P +H+           
Sbjct: 76  CPAPPPGTVAAALTVGAAVELLQSCALVQDDV--MDNSPVRRGQPALHVLLGSTRPAAAG 133

Query: 111 -----YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                + +  A++AG+  + +A +  +      +     + + S+        M+ GQ L
Sbjct: 134 PGALGFGQSAAVLAGDLAMVWAEDTFADAHPPPEVAAPVRRLWSVLRT----EMIAGQYL 189

Query: 166 D---IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
           D     D     T       +K+G   +    E GA++A A       LR  G   G+ F
Sbjct: 190 DLAGQADASHSATHALRTAVLKSGRYSVARPLELGALLAAAPPEVCRVLRAAGGAAGLAF 249

Query: 222 QLADDLL 228
           QL DDLL
Sbjct: 250 QLRDDLL 256


>gi|119470882|ref|XP_001258098.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
 gi|119406250|gb|EAW16201.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
          Length = 764

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 75/197 (38%), Gaps = 18/197 (9%)

Query: 39  LLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           L + I Y   +  K +RS ++        V+  +  ++   ++ +H  SLI DD+   D+
Sbjct: 463 LQAPIHYICSMPSKGVRSRMIEAFNYWLEVDETSLTKIRRLVDLLHNASLILDDIE--DH 520

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG+P  H  +    AI + N +   A ++    +     +I  + + +L       
Sbjct: 521 SPKRRGRPATHTIFGHSQAINSANFMFVQAVQVARQFRNPNAVDILLEELENL------- 573

Query: 158 GMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
               GQ  D+  ++       ++   +   KTG L         + A      +  L   
Sbjct: 574 --YLGQSWDLDWKYKLRCPSPSEYLNMVDNKTGGLFRLLLRL--MQAERKGTTEVDLDGL 629

Query: 214 GENLGIIFQLADDLLDC 230
               G  FQ+ DD ++ 
Sbjct: 630 TVLFGRFFQIRDDYMNL 646


>gi|169867072|ref|XP_001840117.1| farnesyldiphosphatesynthetase [Coprinopsis cinerea okayama7#130]
 gi|116498669|gb|EAU81564.1| farnesyldiphosphatesynthetase [Coprinopsis cinerea okayama7#130]
          Length = 402

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 77/253 (30%), Gaps = 40/253 (15%)

Query: 17  DTILDDLLLQ-TASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNV------NH 69
           + I D++L      HM  +  +   + + Y + GGK  R   V +   +          +
Sbjct: 16  NEIRDEILAYFQGEHMPPEAVEWYKNNLDYNVPGGKLNRGMSVCDTVQILKGRELTDEEY 75

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAF 128
             A  +G  +E +  + L+ DD+  MD    RRG+P  +        AI     L    +
Sbjct: 76  KRAAVLGWCVELLQGFFLVSDDI--MDASITRRGQPCWYRVPKVGMLAINDSFMLEAPIY 133

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD----EFIDETQVFMIQKMK 184
            +I     +         +   T      G L   +   +D          +  +I   K
Sbjct: 134 WLIKKYFRRESFYADLVDLFHETTYQTEMGQLVDLITAPEDVVDLSKFSLERHRLIVVYK 193

Query: 185 TGALMCFACESGAIM--------------------AHAS-----QNEKERLRCFGENLGI 219
           T     +   + A+M                      A            L      LG 
Sbjct: 194 TAYYSFYLPVACAMMICGIPFPEKEPRFDFLNGGFGGAPLDPTADPYTTALSIL-IPLGE 252

Query: 220 IFQLADDLLDCEE 232
            FQ+ DD LD   
Sbjct: 253 YFQVQDDYLDYSA 265


>gi|197724595|emb|CAP07654.1| geranylgeranyldiphosphate synthase [Sphaceloma manihoticola]
          Length = 307

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K  R  L+      + +      ++G  ++ +H  SLI DD    D   +RRG+P  H  
Sbjct: 26  KHFRVQLLEALNIWYELPQNEVSKIGDILQLLHNSSLILDD--FQDRSPLRRGRPAAHAL 83

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           + E  AI + +     A  +             +  ML         G            
Sbjct: 84  FGEAQAINSSSYGFIKAVALAQESFDLESTKAVTTAMLRSFE-----GQAAELHWTHTKT 138

Query: 171 FIDETQVFMIQKMKTGALMCFACESG-AIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
                +   +      +L+  A +   A    A+  ++  +      LG  +Q+ DD ++
Sbjct: 139 CPSVQEYLEMVNF--SSLLHLAPQLMQAKRGSATPVDQRSMVSLMRLLGQFYQIRDDYMN 196

Query: 230 CEE 232
              
Sbjct: 197 LTS 199


>gi|159125980|gb|EDP51096.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus A1163]
          Length = 347

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 77/236 (32%), Gaps = 28/236 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSF------LVTECASLFNVNHL 70
           T+ +DLL     +   ++  +     +   + GGK  R        +      L +    
Sbjct: 16  TLAEDLLAHAKKYNLPENAVKWFEQVLNVNVPGGKLNRGLSVPDTGIALLQKPLTDEQFK 75

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +G   E +  + L+ DD+  MD+   RRG+P  +           G   +  AF +
Sbjct: 76  HLSILGWLTELLQAFFLVSDDM--MDSSITRRGQPCWYRHPG------VGLIAINDAFML 127

Query: 131 ISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLD--------IQDEFIDETQVFM 179
            S     LK + RS           +        GQ+ D        +  +     +   
Sbjct: 128 ESGIYVILKKHFRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYMF 187

Query: 180 IQKMKTGALMCF--ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KT     +     +   +  A+    ++       LG  FQ+ DD LD   D
Sbjct: 188 IVTYKTAYYSFYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGD 243


>gi|115400049|ref|XP_001215613.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191279|gb|EAU32979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 653

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 23/168 (13%)

Query: 76  GAAIE-----CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            + IE       H  +L+ DD+   D+  +RRGKPT ++ + +   + +   L   A   
Sbjct: 395 ASVIERVASMLFHS-TLMIDDIE--DDSTLRRGKPTAYLVFGKAQTVNSATYLYARATRE 451

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTG 186
           +   K           + +         +  GQ LD+  +F       ++   +   KTG
Sbjct: 452 LEQLKHPESKTAFLDELET---------LALGQALDLYWKFHKTCPTTSEYLTMVDNKTG 502

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                A     + + A+      L      +G  +Q+ DD L+   D 
Sbjct: 503 GFFRMALRIMELESGATP--CPDLTHLVTLMGRYYQIRDDYLNLTSDE 548


>gi|206573494|gb|ACI14291.1| farnesyl diphosphate synthase [Linum usitatissimum]
          Length = 172

 Score = 76.0 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 14/166 (8%)

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE +  Y L+ DD+  MD  + RRG+P           I A +G++     I    K 
Sbjct: 1   WCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGL-IAANDGIVLRN-HIPRILKK 56

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGAL 188
             ++      +L L + +       GQM+D+      E  +          I + KT   
Sbjct: 57  HFRNKAYYVDLLDLFNEVE-FQTAHGQMIDLITTLEGEKDLSKYTSTLHRRIVQYKTAYY 115

Query: 189 -MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                     +MA     E   ++    ++G  FQ+ DD LDC  D
Sbjct: 116 SFYLPVACALLMAGEKLEEHVEVQNVLVDMGTYFQVQDDYLDCFGD 161


>gi|70985182|ref|XP_748097.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus Af293]
 gi|66845725|gb|EAL86059.1| farnesyl-pyrophosphate synthetase [Aspergillus fumigatus Af293]
          Length = 347

 Score = 76.0 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 77/236 (32%), Gaps = 28/236 (11%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSF------LVTECASLFNVNHL 70
           T+ +DLL     +   ++  +     +   + GGK  R        +      L +    
Sbjct: 16  TLAEDLLAHAKKYNLPENAVKWFEQVLNVNVPGGKLNRGLSVPDTGIALLQKPLTDEQFK 75

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
               +G   E +  + L+ DD+  MD+   RRG+P  +           G   +  AF +
Sbjct: 76  HLSILGWLTELLQAFFLVSDDM--MDSSITRRGQPCWYRHPG------VGLIAINDAFML 127

Query: 131 ISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLD--------IQDEFIDETQVFM 179
            S     LK + RS           +        GQ+ D        +  +     +   
Sbjct: 128 ESGIYVILKKHFRSHPAYVDFLELFHETTWQTELGQLCDLITAPEDKVDLDNFSMEKYMF 187

Query: 180 IQKMKTGALMCF--ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I   KT     +     +   +  A+    ++       LG  FQ+ DD LD   D
Sbjct: 188 IVTYKTAYYSFYLPVALALLYLELATPENLQQTHDILIPLGQYFQVQDDYLDAYGD 243


>gi|116197531|ref|XP_001224577.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51]
 gi|88178200|gb|EAQ85668.1| hypothetical protein CHGG_06921 [Chaetomium globosum CBS 148.51]
          Length = 715

 Score = 75.6 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 77/215 (35%), Gaps = 21/215 (9%)

Query: 25  LQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           ++    + +   D L +  RY   L GK IR   +      + V    A  V  A+  +H
Sbjct: 407 MEVVQDVPSLGTDVLEAPSRYIDSLPGKGIRHKAIDALNVWYRVPPQQAAIVSKAVHLLH 466

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   D+  +RRGKP  H+ +  +  I +       A E +++ K +   ++ 
Sbjct: 467 GASLMLDDIE--DSSRLRRGKPAAHLVFGTMQTINSAGFRFLNALEELTNSKLEELQDLY 524

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG-AIMAHA 202
                 L     L                 E +   +     G+L         A     
Sbjct: 525 VGQSYDLAWTCNLSC-------------PTEEEYLAMV---DGSLFRMLARMLDAQSDSP 568

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE-DLPK 236
           ++ +   +  F   LG  FQ+ DD ++    D  K
Sbjct: 569 TKPDVVLITRFMTLLGRFFQIRDDYMNLTSADYTK 603


>gi|70985354|ref|XP_748183.1| geranylgeranyl pyrophosphate synthase [Aspergillus fumigatus Af293]
 gi|66845811|gb|EAL86145.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus
           fumigatus Af293]
          Length = 452

 Score = 75.6 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 72/207 (34%), Gaps = 14/207 (6%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           + A+      N  LL  + Y   L  K +R+ LV      F + H     V   ++ +H 
Sbjct: 195 ERAASPVALGNSALLDPVHYIQSLPSKNMRTKLVDALNLWFQLPHHLVDTVKGTVDDLHN 254

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +LI DD+   D+ Y+RRG    H  +     I +   LL  A   +S    Q    I  
Sbjct: 255 STLILDDIQ--DSSYLRRGFAATHHVFGSAQCINSATYLLVQAASRLSVHNEQYPAVI-- 310

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMA 200
                     GL+ +  GQ  D+            +   +   KTG +           +
Sbjct: 311 -----TVFLDGLKELALGQSWDLNWRSTGYCPSTEEYMAMVDGKTGVMFDMIVRMMHCFS 365

Query: 201 HASQNEKERLRCFGENLGIIFQLADDL 227
            +       L    + LG  +Q+ DD 
Sbjct: 366 SSQTVPVSELSQLTQLLGRWYQVRDDY 392


>gi|261202778|ref|XP_002628603.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis
           SLH14081]
 gi|239590700|gb|EEQ73281.1| farnesyl pyrophosphate synthetase [Ajellomyces dermatitidis
           SLH14081]
          Length = 347

 Score = 75.6 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 82/244 (33%), Gaps = 26/244 (10%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LV 58
           + +    + +   L+   + H     + +   +   +++     GGK  R        L 
Sbjct: 4   RTDRAAFEAVFPSLVKDISDHANQYGLPSIAREWFENSMNANTPGGKLNRGLSVPDTGLA 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                L +        +G   E +  + L+ DD+  MD+   RRG+P  + + +     I
Sbjct: 64  LLEKPLNDEQFKHLCTLGWMTEFLQAFFLVSDDM--MDSSITRRGEPCWYRRPNVGMIAI 121

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD--------IQDE 170
               +L  A  ++   K   + +      L L H +  Q  L GQ+ D        +   
Sbjct: 122 NDAFMLEAAIYVL--LKKHFRSHPAYVDFLELFHEVTFQTEL-GQLCDLLTAPEYNVDLN 178

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLL 228
                +   I   KT     +     A+  +  A+ +   +       LG  FQ  DD L
Sbjct: 179 NFSMDKFNFIVIYKTAYYSFYLPVVLALHYLQLATPSNLRQAHDILIPLGQYFQAQDDYL 238

Query: 229 DCEE 232
           D   
Sbjct: 239 DVFG 242


>gi|310800265|gb|EFQ35158.1| polyprenyl synthetase [Glomerella graminicola M1.001]
          Length = 742

 Score = 75.6 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 22/231 (9%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSF------LVTECA 62
           ++ +K      +DLL  +      + +++ +L+   Y        R        L+    
Sbjct: 411 KKKAKASHETREDLLTVSPCAWPAELDEKNILAPYLYTAA-----RPASGARDKLMDALD 465

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           + + V       +   +  +H  SL+ DD+   DN  +RRG P+ H+ +       + + 
Sbjct: 466 NWYRVPPGALATIRTIVRIMHNASLMLDDVQ--DNSPVRRGSPSAHVVFGTAQTTNSASY 523

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L+    ++           + S+L           G                 + +   +
Sbjct: 524 LMIKCVDLARRLGNDTLSCLLSELGQLH------LGQSHDLAWTFHCRAPSMPEYYSHLE 577

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            KTG L   A     + A A+QN+          LG ++QL DD  D   +
Sbjct: 578 QKTGGLFRMASRM--MRASATQNKHLDACKLMSLLGRLYQLRDDYQDITSE 626


>gi|83774154|dbj|BAE64279.1| unnamed protein product [Aspergillus oryzae]
          Length = 700

 Score = 75.6 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 75/215 (34%), Gaps = 14/215 (6%)

Query: 20  LDDLLLQTASHMQTQHNDRL-LSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           +D +  +  S    Q    + + AI ++    + +R   V        + +    RV + 
Sbjct: 394 IDAIEEEAESPKPEQLGTEVGIFAIHHS----RCVREAFVDAMNVWLVLPNDVVNRVKSI 449

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
            E +H  SL+ DD+   D+  +RRG+P  H  + +   I + N LL  A   +     Q 
Sbjct: 450 AETLHNASLLLDDIE--DSSPLRRGQPAAHTIFGQGQTINSANYLLIQAMHQVRQLDNQR 507

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
             ++  + M +L       G         Q E   + +   +       L          
Sbjct: 508 CMDVFVEEMRNLF-----IGQSFDLYWTRQGECPSQDEYLEMISQ--SGLFRLLTRLMTE 560

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A    N    L      LG  FQ+ DD  +  ED
Sbjct: 561 KASTQHNSTITLDSLVSLLGQYFQIRDDYKNLTED 595


>gi|85543985|pdb|1YHM|A Chain A, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
           Disphosphate Synthase With Alendronate, Isopentenyl
           Diphosphate And Mg+2
 gi|85543986|pdb|1YHM|B Chain B, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
           Disphosphate Synthase With Alendronate, Isopentenyl
           Diphosphate And Mg+2
 gi|85543987|pdb|1YHM|C Chain C, Structure Of The Complex Of Trypanosoma Cruzi Farnesyl
           Disphosphate Synthase With Alendronate, Isopentenyl
           Diphosphate And Mg+2
          Length = 362

 Score = 75.6 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 72/224 (32%), Gaps = 39/224 (17%)

Query: 48  LGGKKIRSFLVTECASLF-------NVNHLTALRVGAA----IECIHCYSLIHDDLPSMD 96
           LGGK  R   V   A  F              L         IE +  + L+ DD+   D
Sbjct: 45  LGGKYFRGXTVVNVAEGFLAVTQHDEATKERILHDACVGGWXIEFLQAHYLVEDDIX--D 102

Query: 97  NGYIRRGKPTVHIQYDEVT--AIIAGNGLLTY----AFEIISSPKTQLKDNIRSQLMLSL 150
               RRGKP  +      T  AI  G  L ++    A+   +  +  LKD +     +  
Sbjct: 103 GSVXRRGKPCWYRFPGVTTQCAINDGIILKSWTQIXAWHYFAD-RPFLKDLLCLFQKVDY 161

Query: 151 THNIG-------------LQGMLGGQMLDIQDEFIDETQVFMIQKMKT-GALMCFACESG 196
              +G             L   +         EF        I K KT           G
Sbjct: 162 ATAVGQXYDVTSXCDSNKLDPEVAQPXTTDFAEF-TPAIYKRIVKYKTTFYTYLLPLVXG 220

Query: 197 AIMAHASQNEKERL-RCFGENLGIIFQLADDLLDCE---EDLPK 236
             ++ A+ + +  L       +G  FQ+ DD+ DC    E L K
Sbjct: 221 LFVSEAAASVEXNLVERVAHLIGEYFQVQDDVXDCFTPPEQLGK 264


>gi|281413632|ref|ZP_06245374.1| geranylgeranyl pyrophosphate synthase [Micrococcus luteus NCTC
           2665]
          Length = 371

 Score = 75.2 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 20/106 (18%)

Query: 40  LSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDN 97
           + AI     GGK++R+ L                    GAA E     +LIHDD+  +D 
Sbjct: 1   MDAIADLTAGGKRLRAVLAWLGWRAAGGEAEDPRIAEAGAAFELFQAAALIHDDI--LDR 58

Query: 98  GYIRRGKPTVHIQ----------------YDEVTAIIAGNGLLTYA 127
              RRG P+VH +                +    AI+AG+  L  +
Sbjct: 59  SDTRRGMPSVHRRFESLHREAGWRHAAEHFGVSAAILAGDVALGMS 104


>gi|325289010|ref|YP_004265191.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964411|gb|ADY55190.1| Polyprenyl synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 304

 Score = 75.2 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 27/229 (11%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDR-LLSAIRYALLG----GKKIRSFLVTECAS 63
           +Q+N   I+ ++  L+     +  TQ   + +   +RY + G    G      LV     
Sbjct: 1   MQDNWAMIEQMMLQLI---HDYFPTQELKKYMSEFVRYKMEGHFPFG-----QLVILHYQ 52

Query: 64  LFNVNHLTALRVGAAIECIHCYSL-IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +F+       R  AA+E +   SL I DDL   DN  +           D    +    G
Sbjct: 53  MFDGQSTDIFRAAAAVELM-ILSLDIFDDLQDNDNFSVP------WNNIDHAIVMNIATG 105

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           LL  + + +    T  + N ++  M +   N  +   + GQ +D+ +    E     + +
Sbjct: 106 LLMLSTKSL--EHTSFEPNKKA--MGTNYLNSCVIKAINGQHIDLLNLIESEKDYIEMVR 161

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
            K+G+LM  AC  G  +A  S+N  + +  + E+LGII Q+ +D+ D  
Sbjct: 162 SKSGSLMASACLVGTALA--SENHHDVVNKYAEHLGIIAQIKNDINDIF 208


>gi|159125895|gb|EDP51011.1| geranylgeranyl pyrophosphate synthase, putative [Aspergillus
           fumigatus A1163]
          Length = 452

 Score = 74.8 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 73/207 (35%), Gaps = 14/207 (6%)

Query: 26  QTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHC 84
           ++A+      N  LL  + Y   L  K +R+ LV      F + H     V   ++ +H 
Sbjct: 195 ESAASPVALGNSALLDPVHYIQSLPSKNMRTKLVDALNLWFQLPHHLVDTVKGTVDDLHN 254

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
            +LI DD+   D+ Y+RRG    H  +     I +   LL  A   +S    Q    I  
Sbjct: 255 STLILDDIQ--DSSYLRRGFAATHHVFGSAQCINSATYLLVQAASRLSVHNEQYPAVI-- 310

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMA 200
                     GL+ +  GQ  D+            +   +   KTG +           +
Sbjct: 311 -----TVFLDGLKELSLGQSWDLNWRSTGYCPSTEEYMAMVDGKTGVMFDMIVRMMHCFS 365

Query: 201 HASQNEKERLRCFGENLGIIFQLADDL 227
            +       L    + LG  +Q+ DD 
Sbjct: 366 SSQTVPVSELSQLTQLLGRWYQVRDDY 392


>gi|78191049|gb|ABB29849.1| farnesyl pyrophosphate synthase [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 234

 Score = 74.8 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 17/178 (9%)

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            A  +G  IE +  Y L+ DD+  MDN + RRG+P  +        I   +G+L     I
Sbjct: 1   KASALGRCIEWLQAYFLVLDDI--MDNSHTRRGQPCWYKLPKVGM-IAVNDGILLR-DHI 56

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQK 182
               K   +       +L L + +       GQM+D+    + E  +          I +
Sbjct: 57  TRILKNHFRAKPYYVDLLDLFNEVE-FQTASGQMVDLITTLVGEKDLSKYSLPTHRRIVQ 115

Query: 183 MKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
            KT             +MA  + ++   ++     +GI  Q+ DD LDC  D   L K
Sbjct: 116 YKTAYYSFYLPVACALLMAGDNLDKHVDVKNILIEMGIYSQVQDDYLDCFADPEVLGK 173


>gi|255521547|ref|ZP_05388784.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
           J1-175]
          Length = 126

 Score = 74.8 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/64 (42%), Positives = 37/64 (57%)

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              ++  I   KTG L+ FA  S A +A A   + +RLR F EN+GI FQ++DD+LD   
Sbjct: 1   TIEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG 60

Query: 233 DLPK 236
           D  K
Sbjct: 61  DETK 64


>gi|227488390|ref|ZP_03918706.1| hypothetical protein HMPREF0294_1540 [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227091604|gb|EEI26916.1| hypothetical protein HMPREF0294_1540 [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 365

 Score = 74.8 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 19/170 (11%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAII 118
           VGAA + +H    I DD+  +D  + RRG  T+H                  Y    A++
Sbjct: 94  VGAAFDLVHTGLCIIDDV--IDADHSRRGLKTIHATATGIASPTIGTHAAAHYGNSIAVL 151

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G   L  A  +++      +   R    L+   +  + G        +        QV 
Sbjct: 152 IGMSSLNAATSLVAKADMDPETTRRVIAELTTAVDDAIIGEFMDVEHSLPGHDPTPRQVD 211

Query: 179 MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               +KT           GA++A       + LR    +LG  F++A+DL
Sbjct: 212 NAALLKTSPYSFEAPLVCGALIAGRPVAVCDTLRVVARHLGAAFRMANDL 261


>gi|114618461|ref|XP_001135269.1| PREDICTED: hypothetical protein [Pan troglodytes]
          Length = 298

 Score = 74.8 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 71/213 (33%), Gaps = 22/213 (10%)

Query: 38  RLLSAIRYALLGGKKIRSFLVT-ECASLFNVNHLTALRVGAAI------ECIHCYSLIHD 90
           RL   + Y  +GGK  R  +V      L       A  +  A+      E +  + L+ D
Sbjct: 12  RLKEVLEYNAIGGKYHRGLMVLVAFRELVEPRKQDADSLQWALTVGWYAELLQAFFLVAD 71

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+  MD+    +G+ + + +          + +L  A  I   PK   ++      ++ L
Sbjct: 72  DI--MDSSLTCQGQISWYQKLGMGL-DAINDAILLEA-CIYCLPKLYCREQPYYLNLMEL 127

Query: 151 THNIGLQGMLGGQMLD--------IQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAH 201
                 Q  + GQ LD        +      E +   + K KT              M+ 
Sbjct: 128 FQQNSYQTEI-GQTLDLITTPQGNMDLHRCTEKRHKSVVKYKTAFYSFYLPVAVAMYMSR 186

Query: 202 ASQN-EKERLRCFGENLGIIFQLADDLLDCEED 233
                E    +     +   FQ+ DD LD   D
Sbjct: 187 MDDKKEHTSAKKILLEIQEFFQIQDDYLDFFGD 219


>gi|145609315|ref|XP_367595.2| hypothetical protein MGG_07506 [Magnaporthe oryzae 70-15]
 gi|145016701|gb|EDK01131.1| hypothetical protein MGG_07506 [Magnaporthe oryzae 70-15]
          Length = 725

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 75/221 (33%), Gaps = 25/221 (11%)

Query: 22  DLLLQTASHMQTQHNDR-LLSAIRYALLGGKKIRSF------LVTECASLFNVNHLTALR 74
           DLL         + ++  +L+A  Y        R        L+    + + V   T   
Sbjct: 404 DLLTVAPCAWPAEADEEDILAAYLYTAA-----RPASGARDKLMDALDNWYRVPPETLAT 458

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +   +  +H  SL+ DD+   DN  +RRG P+ HI +     I +   +     ++    
Sbjct: 459 IRTIVRIMHNASLMLDDVH--DNSPLRRGSPSAHIVFGTAQTINSAGYVTIKCVDL---A 513

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           + +L D+  S   L         G                   +   + KTG L      
Sbjct: 514 RRRLGDDALS--CLLSELGQLHLGQSHDLAWTFHCRAPSMAGYYSHLEQKTGGLF----R 567

Query: 195 SGAIMAHASQNEKERLRCFGE--NLGIIFQLADDLLDCEED 233
             A M  AS  +   L   G    LG ++QL DD  D   +
Sbjct: 568 LAARMMRASATQNRHLDACGLMSLLGRLYQLRDDYQDITSE 608


>gi|227543002|ref|ZP_03973051.1| possible geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227181224|gb|EEI62196.1| possible geranylgeranyl pyrophosphate synthase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 365

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 19/170 (11%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ----------------YDEVTAII 118
           VGAA + +H    I DD+  +D  + RRG  T+H                  Y    A++
Sbjct: 94  VGAAFDLVHTGLCIIDDV--IDADHSRRGLKTIHATAAGIASPTIGTHAAAHYGNSIAVL 151

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G   L  A  +++      +   R    L+   +  + G        +        QV 
Sbjct: 152 IGMSSLNAATSLVAKADMDPETTRRVIAELTTAVDDAIIGEFMDVEHSLPGHDPTPRQVD 211

Query: 179 MIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               +KT           GA++A       + LR    +LG  F++A+DL
Sbjct: 212 NAALLKTSPYSFEAPLVCGALIAGRPVAVCDTLRVVARHLGAAFRMANDL 261


>gi|240272920|gb|EER36445.1| geranylgeranyl diphosphate synthase [Ajellomyces capsulatus H143]
          Length = 392

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 28/204 (13%)

Query: 31  MQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH 89
              +    LL    Y +   GK +R   +       +V   +   +   +  +H  SL+ 
Sbjct: 87  WSPEKEKILLGPYDYMVEQPGKDLRRQFIAAFNRWLHVPEESIATITKVVVMLHTASLLV 146

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN---GLLTYAFEIISSPKTQLKDNIRSQL 146
           DD+   D+  +RRG P  H  +       + +    LL  +     + K +   ++R  +
Sbjct: 147 DDVE--DSSTLRRGVPVAHNIFGNG----SDDKFCELLPRSGRGTETQKPECDKHLREGI 200

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE 206
           +     +                    E     +   KTG L   A +    +  A  + 
Sbjct: 201 VKPAPRDTLTC--------------PTEEDYLEMVGNKTGGLFRLAIK----LMQAESDT 242

Query: 207 KERLRCFGENLGIIFQLADDLLDC 230
                     +G+IFQ+ DD L+ 
Sbjct: 243 GIDCVTLVNLMGLIFQICDDYLNL 266


>gi|323702888|ref|ZP_08114546.1| hypothetical protein DesniDRAFT_1758 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532146|gb|EGB22027.1| hypothetical protein DesniDRAFT_1758 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 255

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 82/223 (36%), Gaps = 24/223 (10%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M+G   + +++  + +  I+ + L+  A H+    +        +       IR  LV  
Sbjct: 1   MSGDNFAVIKKELQSVHDIIRNQLIIKAGHVGQYAHLEFCPTDNF-------IRPALVLT 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSM-DNGYIRRGKPTVHIQYDEVTAIIA 119
            A L+N      + +GA ++ I   S IH  +P   DN    R              ++ 
Sbjct: 54  VARLYNCMSPKVISLGAIVQFIFMASQIHARIPETADNNRDPR--------DGTQFPVLV 105

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ L    F  +        DN     +  L   IG     G       +   +   +F 
Sbjct: 106 GDYLFGKFFTTLC-------DNGIVHYLRPLAEIIGRLNEGGILSKTNPNAITENESLFE 158

Query: 180 -IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            I K++   LM  +      +A A + +K  L  FG +LG+++
Sbjct: 159 EIVKLEVAELMAGSARLAGDLAGAPEEDKSLLHEFGLSLGMVY 201


>gi|317028454|ref|XP_001390105.2| hypothetical protein ANI_1_1118034 [Aspergillus niger CBS 513.88]
          Length = 569

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 13/163 (7%)

Query: 76  GAAIE----CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            + IE     I   +L+ DD+   D+  +RRGKP  H+ + +   + +   L   A   +
Sbjct: 312 ASVIEHITNMIFHSTLMIDDIE--DDSMLRRGKPAAHVVFGKAQTVNSATYLYAKATRDL 369

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
              +         + + +L     L      Q            +   +   KTG L   
Sbjct: 370 DQLQQDACKAAFLEELETLALGQALDLHWKFQKTCP-----TTGEYLTMVDNKTGGLFRM 424

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                 I + A       L      +G  +Q+ DD L+   D 
Sbjct: 425 TLRLLEIESKA--EPCPDLMQLITLMGRYYQIRDDYLNLTSDE 465


>gi|332523798|ref|ZP_08400050.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
 gi|332315062|gb|EGJ28047.1| polyprenyl synthetase [Streptococcus porcinus str. Jelinkova 176]
          Length = 319

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 25/214 (11%)

Query: 15  RIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN-HLTAL 73
            ID+ +  LLL+    +  Q++D L       ++ G + R  L     +L++   + T  
Sbjct: 19  EIDSRIKALLLE----LPKQYHDILQ------VVNGNRFRPLLTYYGYTLYSNELNETIY 68

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
               AIE IH  S+I DD+   D    R G PTVH QY    A+I    LL    E++S+
Sbjct: 69  HSATAIELIHKASIIIDDIIDQDE--KRHGLPTVHQQYSINEALIITVFLLGKCIELLSN 126

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQKMKTGALMCFA 192
                              +  +  M  G + ++  D+ +  ++V  I   +T  ++  +
Sbjct: 127 IDDS----------TIRLFSQMISKMCQGTLSELNIDDNVTLSEVKYILDNQTSQVIQNS 176

Query: 193 CESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
              G + ++      + L   G  LG +FQL +D
Sbjct: 177 LIIG-MKSYDDSIYNQYLETIGYKLGYLFQLLND 209


>gi|255017999|ref|ZP_05290125.1| hypothetical protein LmonF_10200 [Listeria monocytogenes FSL
           F2-515]
          Length = 205

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           QM       +   +       KT  L   +C SGA  + A++    +    G  LG+ FQ
Sbjct: 33  QMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQ 92

Query: 223 LADDLLDCEE-DLP 235
           + DD+LD    D  
Sbjct: 93  IIDDVLDYTSTDEG 106


>gi|225684972|gb|EEH23256.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis
           Pb03]
 gi|226294284|gb|EEH49704.1| farnesyl pyrophosphate synthetase [Paracoccidioides brasiliensis
           Pb18]
          Length = 346

 Score = 74.0 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 69/199 (34%), Gaps = 20/199 (10%)

Query: 49  GGKKIRSFLV-----TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GGK  R   V          L +        +G   E +  + L+ DD+  MD  + RRG
Sbjct: 48  GGKLNRGLSVPDSGLALLGKLSDEQFKHLCTLGWLTELLQAFFLVSDDM--MDGSHTRRG 105

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +P  H +       I  + +L  +  +I   K   + +      L L H +  Q  L GQ
Sbjct: 106 EPCWHRRPGVNLIAINDSFMLESSIYVI--LKKHFRFHPAYVDFLELFHEVSFQTEL-GQ 162

Query: 164 MLDIQDEFIDETQVF--------MIQKMKTGALMCFACESGAI--MAHASQNEKERLRCF 213
           + D+     D   +          I   KT     +   + A+  +  A+     +    
Sbjct: 163 LCDLLTAPEDNVNLDNFNMDKFNFIVIYKTAYYSFYLPVALALHYLQLATPGNLRQAHDI 222

Query: 214 GENLGIIFQLADDLLDCEE 232
              LG  FQ  DD LD   
Sbjct: 223 LIPLGQYFQAQDDFLDVFG 241


>gi|323454358|gb|EGB10228.1| hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens]
          Length = 1365

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 84/231 (36%), Gaps = 18/231 (7%)

Query: 7    SKLQENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALLGGKK-IRSFLVTECAS 63
              L+   +RI  +++  L     +S      +  L  A R      ++  R  +V   A 
Sbjct: 1010 EDLKNMKQRIKALVERSLDGGGGSSSKSGGSHPLLQEAAREFFERRERAFRPAVVLLVAR 1069

Query: 64   LFNVN------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKP--TVHIQYDEVT 115
                             +   +E +    ++HD +   D           T         
Sbjct: 1070 AVEGTASGTTLPEKQCLLAEIVEMMCTAQVVHDSVLEDDEAGSTGNVAHRTYSQNAGNKV 1129

Query: 116  AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
            +++AG+ LL      +S     L D    +LM +   ++   G+L  Q      + + + 
Sbjct: 1130 SVLAGDFLLARCSVALSE----LGDLAVVELMATALESMVQGGVLKAQAGLGGLDGLLDW 1185

Query: 176  QVFMIQ-KMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQL 223
              ++ + ++KT +L+  AC S AI+    A     E +  +  NLG+ +Q+
Sbjct: 1186 DAYVARVELKTSSLIADACRSAAILGGEAADGAVAEAVYAYASNLGVAYQI 1236


>gi|134300043|ref|YP_001113539.1| hypothetical protein Dred_2199 [Desulfotomaculum reducens MI-1]
 gi|134052743|gb|ABO50714.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
          Length = 256

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 83/221 (37%), Gaps = 18/221 (8%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M G L +   E+ K I   +   L     H+    +        +       IR  +V  
Sbjct: 1   MLGDLFAGFWEDIKTIHNNIKTQLFVKVGHVGEYAHLEFSPQDNF-------IRPAMVLI 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L+N      L +GA ++ I   S IH  +P   +  +     TV  +      ++ G
Sbjct: 54  VARLYNCRSPRVLSLGAIVQFIFMASCIHKKIP---DAAVPNH--TVDPRDGTQFPVLVG 108

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L    F  + +          ++++ ++     L+     Q+ D      D   +  I
Sbjct: 109 DYLYGKFFTNLCNSGLLCYLRPLAEIIGAIHEGGILKINKAAQLKD------DNQLMNEI 162

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            +++   LM  A      +A A Q +++ L  FG NLG+++
Sbjct: 163 IRLEVAELMAGAASLAGDVAGAPQKDQQLLHEFGLNLGMLY 203


>gi|126348819|ref|XP_001373435.1| PREDICTED: similar to farnesyl pyrophosphate synthetase (EC
           2.5.1.1), partial [Monodelphis domestica]
          Length = 259

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 54/165 (32%), Gaps = 21/165 (12%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +  + L+ DD+  MD+   RRG+P  +           G   +  A  + +     LK  
Sbjct: 1   VQAFFLVADDI--MDSSLTRRGQPCWYKSPG------IGLDAINDAMLLEACVYRLLKHF 52

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQD-----------EFIDETQVFMIQKMKTG-ALM 189
            R Q        + LQ     ++    D              +E +   I K KT     
Sbjct: 53  CRGQPYYLNLIELFLQCTYQTEIGQTLDLITAPQGKVDLTRFEEKRYKTIVKYKTAFYSF 112

Query: 190 CFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED 233
                S   MA    + E    +     +G  FQ+ DD LD   D
Sbjct: 113 YLPFASAMYMAGIDGEKEHTNAKNILLEMGEFFQIQDDYLDLFGD 157


>gi|1160178|emb|CAA87327.1| farnesyl pyrophosphate synthetase like-4 [Homo sapiens]
          Length = 348

 Score = 73.7 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 75/216 (34%), Gaps = 28/216 (12%)

Query: 38  RLLSAIRYALLGGKKIRSFLVTECA--SLFNVNHLTALRV------GAAIECIHCYSLIH 89
           RL   + Y  +GGK  R  L    A   L +     A  +      G  +E +  + L+ 
Sbjct: 39  RLKEVLEYNAIGGKYNR-RLTVAVAFRELVDPRKQDADSLQRAWTVGWCVELLQAFFLVA 97

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLML 148
           DD+  MD+   RRG+   + +      AI   N L    + ++   K   ++      ++
Sbjct: 98  DDI--MDSSLTRRGQICWYQKPGVGLDAIDDANLLEACIYPLL---KLYCREQPYYLNLI 152

Query: 149 SLTHNIGLQGMLGGQMLDIQDE--------FIDETQVFMIQKMKTGALMCFACESGA--I 198
            L      Q  + GQ LD+              E +   I K KT     +   + A   
Sbjct: 153 ELFLQSSYQTEI-GQTLDLLTXPQGNVDLVRFTEKRYISIVKYKTALSSSYLPIAAAXXX 211

Query: 199 MAHASQNEKERLRCFGENLGIIF-QLADDLLDCEED 233
                + E          +G  F Q+ DD L+   D
Sbjct: 212 XGIVXEKEHANAXKILLEMGE-FSQIQDDYLELFGD 246


>gi|328478740|gb|EGF48346.1| Octaprenyl-diphosphate synthase [Lactobacillus rhamnosus MTCC 5462]
          Length = 176

 Score = 73.7 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 28/56 (50%)

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                  KT AL   A  +GA + H S  +K+    FG  LG+ FQ+ DDLLD  +
Sbjct: 20  YLSAISGKTAALFALATYTGATIGHLSAAQKKAAYRFGRQLGMAFQMIDDLLDYTQ 75


>gi|316954848|gb|EFV46383.1| decaprenyl-diphosphate synthase subunit 1 [Trichinella spiralis]
          Length = 146

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 3/85 (3%)

Query: 148 LSLTHNIGLQGMLGGQMLDIQ---DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ 204
            +  +   L  ++ G+++ ++   DE    ++       KTG+L   + ++ A++A+ S+
Sbjct: 26  ATHGYKTILDDLVKGELIQMESGSDESRLFSEYLTKCYKKTGSLFSNSLKAAAVLANCSE 85

Query: 205 NEKERLRCFGENLGIIFQLADDLLD 229
              + +  FG N G++FQL DDLLD
Sbjct: 86  LCVKNVYQFGRNFGLMFQLVDDLLD 110


>gi|109130476|ref|XP_001097788.1| PREDICTED: farnesyl pyrophosphate synthase-like [Macaca mulatta]
          Length = 380

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 23/253 (9%)

Query: 1   MNGGLPSKL-----QENSKRIDTILDDLLLQTASHMQTQHN-DRLLSAIRYALLGGKKIR 54
           MNG   S +     Q+  +    I+  L      + +T     +L   + Y  +GGK  +
Sbjct: 29  MNGDQKSDVYAQGKQDFIQHFSQIVRVLTEDEMGYSETGDAIAQLKEVLEYNAIGGKYHQ 88

Query: 55  SFLVTECASLFNVNH-------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
              V   +                AL +G  +E +  + L+ DD+  MD+    +G+   
Sbjct: 89  GLTVLVASRELVEPRKQDADSLQRALTMGWFVELLQAFFLVADDI--MDSSLSPQGQIWW 146

Query: 108 HIQYDEVTAIIAGNGLLTYA-----FEIISSPKTQLKDNIRSQLMLSLTHNIG-LQGMLG 161
           + +          + +L  A      ++    +    D I+  L  S   +IG    ++ 
Sbjct: 147 YQKPGMGL-DAINDAMLPEACIYHLLKLYCLEQPYYLDLIQLFLQSSYQTDIGQTLDLIT 205

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-KERLRCFGENLGII 220
               ++      E +   I K K          +   +A     +     +    ++G  
Sbjct: 206 APQGNVGLGRFTEKRYKSIVKYKAAFYSYLPVAAAMYIAGIDGEKNHANAKKILLDMGEF 265

Query: 221 FQLADDLLDCEED 233
           FQ+ DD LD   D
Sbjct: 266 FQIQDDYLDLFGD 278


>gi|301752372|gb|ADK89163.1| ComQ [Bacillus licheniformis 9945A]
          Length = 303

 Score = 73.3 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 20/179 (11%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           S    +   A  +GA IE +     I DDL   D+           ++ +   A+ A   
Sbjct: 40  SFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEP------WMKINRSVAMNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++ISS   +     +    +  +        + GQ  D+ +    E +   + K
Sbjct: 94  LYTISIKVISSVSKEPVFFEKLMEYILQS--------MQGQHDDLSNRPATEDECLDMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL----DCEEDLPKK 237
            K+GAL    C  GA++A  +      +  +   LGI  Q+ +D      D + D+ KK
Sbjct: 146 RKSGALTALPCVLGAMLA--TGKFDPAVEKYAYQLGIASQIENDYKALFYDSKSDIAKK 202


>gi|134057781|emb|CAK38176.1| unnamed protein product [Aspergillus niger]
          Length = 434

 Score = 73.3 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 13/163 (7%)

Query: 76  GAAIE----CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            + IE     I   +L+ DD+   D+  +RRGKP  H+ + +   + +   L   A   +
Sbjct: 177 ASVIEHITNMIFHSTLMIDDIE--DDSMLRRGKPAAHVVFGKAQTVNSATYLYAKATRDL 234

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
              +         + + +L     L      Q            +   +   KTG L   
Sbjct: 235 DQLQQDACKAAFLEELETLALGQALDLHWKFQKTCP-----TTGEYLTMVDNKTGGLFRM 289

Query: 192 ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                 I + A       L      +G  +Q+ DD L+   D 
Sbjct: 290 TLRLLEIESKA--EPCPDLMQLITLMGRYYQIRDDYLNLTSDE 330


>gi|328848703|gb|EGF97904.1| hypothetical protein MELLADRAFT_41117 [Melampsora larici-populina
           98AG31]
          Length = 297

 Score = 73.3 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 11/180 (6%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K++ + +       + V       +   +  IH  SL+ DD+   D+  +R+GKP  H  
Sbjct: 16  KELPAMVTRAFNHWYQVPQPALDIILKIVGPIHVASLLIDDIQ--DDSDLRKGKPVAHTV 73

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           Y     I     +   A+  IS     LK    + L   +   I       G+ L  +D 
Sbjct: 74  YGVAQTINTATYVFFDAYRNISKLTPFLKSPEITDLGSIIDDEIMALHRGQGKDLYWRDS 133

Query: 171 FI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
            I   E +   +   KTGA+     +   +  H    +   L      +GI+ Q+ +DLL
Sbjct: 134 LICPTEEEYLRMIHNKTGAMFRLPIKLCKLYLH----DCFPLVNI---IGILAQIQNDLL 186


>gi|241742424|ref|XP_002414173.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
 gi|215508027|gb|EEC17481.1| geranylgeranyl pyrophosphate synthase/polyprenyl synthetase,
           putative [Ixodes scapularis]
          Length = 397

 Score = 72.9 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 54  RSFLVTECASLFN---------------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNG 98
           R  +V   +                           +    E IH   LIH  + ++ N 
Sbjct: 110 RGLIVLLLSKAAGHPSCRQDCLEEERVAGITQRQRSLAEITEMIHTAHLIHRGVLNLSND 169

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
                     +Q+    +++ G+ L+  A + ++  K     ++ +  +     +  L G
Sbjct: 170 QFPDATTLRDLQFGNKISVLTGDYLIANASKSLTDLKNCKVVDLVATAIGDFMQSEFL-G 228

Query: 159 MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
               Q   I    +          + TG+LM  +C++   +A      +E    FG+++G
Sbjct: 229 DHDQQGNPIPVAGMTIGHWEEKHYLSTGSLMSNSCQATLELASHDDQLQELGFEFGKSIG 288

Query: 219 IIFQLADDL 227
           + +Q+  DL
Sbjct: 289 LAWQVHSDL 297


>gi|119182916|ref|XP_001242557.1| hypothetical protein CIMG_06453 [Coccidioides immitis RS]
 gi|303319511|ref|XP_003069755.1| farnesyl pyrophosphate synthetase, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240109441|gb|EER27610.1| farnesyl pyrophosphate synthetase, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|320040783|gb|EFW22716.1| farnesyl-pyrophosphate synthetase [Coccidioides posadasii str.
           Silveira]
          Length = 347

 Score = 72.9 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 77/247 (31%), Gaps = 32/247 (12%)

Query: 10  QENSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LV 58
           + +    + +   L+     H     +     +    ++     GGK  R        L 
Sbjct: 4   KTSRADFEAVFPSLVQDLTEHAQQYGVPATALEWFQRSLNANTPGGKLNRGLSVPDSALH 63

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                L +        +G   E +  + L+ DD+  MD    RRG+P  + +        
Sbjct: 64  LLNQPLTDKQFKDLCTLGWLTELLQAFFLVSDDM--MDTSITRRGEPCWYRREG------ 115

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---HNIGLQGMLGGQMLDIQDEFIDET 175
            G   +  +F + SS    LK + RS           +        GQ+ D+     D  
Sbjct: 116 VGMIAINDSFMLESSIYVLLKKHFRSHPAYVDFIELFHEITHQTELGQLCDLLTAPEDHV 175

Query: 176 QV--------FMIQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLAD 225
            +          I   KT     +   + A+  +  A+    ++       LG  FQ  D
Sbjct: 176 DLNNFSMNKFTFIVIYKTAYYSFYLPVALALHYLQLATPKNLKQAHDILIPLGEYFQAQD 235

Query: 226 DLLDCEE 232
           D LD   
Sbjct: 236 DFLDVFG 242


>gi|322695231|gb|EFY87043.1| geranylgeranyl diphosphate synthase [Metarhizium acridum CQMa 102]
          Length = 325

 Score = 72.9 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 22/206 (10%)

Query: 36  NDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTA---LRVGAAIECIHCYSLIHD 90
            D++L+A    L    GK IR  L         V             A  C+  +S+  D
Sbjct: 34  EDKVLTAPLDYLRESPGKDIRGGLTNAFNQFLCVPEEKVSIKRHPSFATMCLTSFSI--D 91

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   D+  +RRG P  H  +     I + N     A + +          I ++ +++L
Sbjct: 92  DIQ--DSSKLRRGVPVAHSIFGIAQTINSANLAYFMAQKELDQLTNPRAYAIFTEELVNL 149

Query: 151 THNIGLQGMLGGQMLDIQD--EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKE 208
               G++       L  +D      E +   + + KTG L   A     +M   S ++++
Sbjct: 150 HRGQGME-------LHWRDSLHCPTEDEYMRMIQNKTGGLFRLAIR---LMQGESSSKRD 199

Query: 209 RLRCFGENLGIIFQLADDLLDCEEDL 234
            L    E LG +FQ+ DD  + + D+
Sbjct: 200 YLPLV-ETLGTLFQIRDDYQNLQSDV 224


>gi|300766618|ref|ZP_07076535.1| polyprenyl synthetase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300495718|gb|EFK30869.1| polyprenyl synthetase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 167

 Score = 72.9 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 8/99 (8%)

Query: 18  TILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTAL--RV 75
             L   L           NDR+   +     GGK +R       +  F  +H TA     
Sbjct: 58  AALKPYLATNVKIDNAAINDRVHDLLA---AGGKFLRPGFFYLFSQ-FGPDHNTARLRAG 113

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            AA+E +H  +LIHDD+  +D    RR   T+H  Y + 
Sbjct: 114 AAAMELLHVATLIHDDV--IDESPERRHVTTIHQDYGQR 150


>gi|322797846|gb|EFZ19754.1| hypothetical protein SINV_16081 [Solenopsis invicta]
          Length = 246

 Score = 72.9 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 15/140 (10%)

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   DN  +RRG P  H  +   +++ A N +L  A E + + +      +  + +L 
Sbjct: 2   DDIQ--DNSILRRGIPVAHSVFGIASSLSAANYVLFIALERVVNLQHSGATRVYMEQLLE 59

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+        +  +D FI   E     +   KTG L   A     + +      +
Sbjct: 60  LHRGQGM-------DIFWRDNFICPTEEDYKTMTIRKTGGLFNLAVRLMKLFS----TYQ 108

Query: 208 ERLRCFGENLGIIFQLADDL 227
           E        LG+ FQ+ DD 
Sbjct: 109 EDFSSLIATLGLYFQIRDDY 128


>gi|319647582|ref|ZP_08001802.1| ComQ protein [Bacillus sp. BT1B_CT2]
 gi|317390430|gb|EFV71237.1| ComQ protein [Bacillus sp. BT1B_CT2]
          Length = 293

 Score = 72.9 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 22/180 (12%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           S    +   A  +GA IE +     I DDL   D+           ++ +   A+ A   
Sbjct: 40  SFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEP------WMKINRSVAMNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I    +  K+ +  + ++  T          GQ  D+ +    E +   + K
Sbjct: 94  LYTISIKVI---GSVSKEPVFFEKLMEYTLQSM-----QGQHDDLSNRPATEDECLDMIK 145

Query: 183 MKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLL----DCEEDLPKK 237
            K+GAL    C  GA++A        E+   +   LGI  Q+ +D      D + D+ KK
Sbjct: 146 RKSGALTALPCVLGAMLATGKFDPTVEK---YAYQLGIASQIENDYKALFYDSKSDIAKK 202


>gi|294942867|ref|XP_002783701.1| hexaprenyl pyrophosphate synthetase, putative [Perkinsus marinus
           ATCC 50983]
 gi|239896273|gb|EER15497.1| hexaprenyl pyrophosphate synthetase, putative [Perkinsus marinus
           ATCC 50983]
          Length = 223

 Score = 72.5 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 6/126 (4%)

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            Y    A+  G+ +++     +S           +  M +L         +   +     
Sbjct: 1   LYGNQQAVWTGDFIISVMIGCLSKINEPRVTARIASSMQNLVKGAYRPVGVSAAVRPHFK 60

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLD 229
            +I ++        KT +L   A E  AI+A            FG + G+ FQ+ DD+LD
Sbjct: 61  RYILKSFY------KTASLFASAMECVAILADLPPALVSACYLFGVHFGLEFQIRDDMLD 114

Query: 230 CEEDLP 235
            E D+ 
Sbjct: 115 VEMDVE 120


>gi|302661975|ref|XP_003022648.1| geranylgeranyl pyrophosphate synthetase AtmG, putative
           [Trichophyton verrucosum HKI 0517]
 gi|291186605|gb|EFE42030.1| geranylgeranyl pyrophosphate synthetase AtmG, putative
           [Trichophyton verrucosum HKI 0517]
          Length = 388

 Score = 72.5 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 71/193 (36%), Gaps = 27/193 (13%)

Query: 49  GGKKIRSFLVTECASLFNVNHLTALRVGAAI-ECIHC-YSLI-------HDDLPSMDNGY 99
            GK IR  L+        V   +   + +A+ +      +L         DD+   D+ +
Sbjct: 80  PGKDIRGQLIAAYNRWLQVPEES---LASAVGKLEQNEATLFANILPPSIDDVE--DSSH 134

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
           +RRG P  H  +     I + N +   A + I   K+    NI  + +++L    G+   
Sbjct: 135 LRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMNLHRGQGM--- 191

Query: 160 LGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                L  +D      E     +   KTG L   A +     +    +    +      +
Sbjct: 192 ----DLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESSVPIDCVPLVD----LM 243

Query: 218 GIIFQLADDLLDC 230
           G++FQ+ DD L+ 
Sbjct: 244 GLMFQVCDDYLNL 256


>gi|163847875|ref|YP_001635919.1| polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222525750|ref|YP_002570221.1| polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669164|gb|ABY35530.1| Polyprenyl synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449629|gb|ACM53895.1| Polyprenyl synthetase [Chloroflexus sp. Y-400-fl]
          Length = 305

 Score = 72.5 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 22/223 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M   +PS+L  +  R++ IL + +    S +   +   +  A         ++R+ +V  
Sbjct: 1   MTFAIPSELHHDLLRVEQILQERMRARYSVIAMVNPHVVTDATD-------RLRALVVLA 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            A L N      +   AA+E I   +  HD    +D    R G+   +  +D    ++ G
Sbjct: 54  VARLGNYTDAQVVHAAAAVELIEAATRAHD--TLIDEHARRTGRG-ANGSWDHGVVLMIG 110

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L   A   ++        ++ SQ          +  +  GQ++ I      ET +   
Sbjct: 111 DYLFALAAGEMARSPDPRIISLYSQ---------AVMQVCEGQLITITSLTPPETALATY 161

Query: 181 QKMK---TGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            +     +GAL+  A ++G +  +      E    FG +LG+ 
Sbjct: 162 WQRTEALSGALLAAAAQAGILCGNLPDTLLEPAARFGMHLGLA 204


>gi|119579179|gb|EAW58775.1| hCG2042152 [Homo sapiens]
          Length = 318

 Score = 72.5 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 57/188 (30%), Gaps = 49/188 (26%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGK 104
           Y  + GK  RS +V   A   N               IH                     
Sbjct: 82  YFDVKGKAFRSIIVVLMARACN---------------IH--------------------- 105

Query: 105 PTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQM 164
              H     V A      L+       S     + DN RS+        +G +       
Sbjct: 106 ---HNNSRHVQASQRATALIAEMIHTASLVHDDVIDNARSRKGKHTRSGLGSK------- 155

Query: 165 LDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
              ++E     Q        T +L+  +C++ +++        E    +G+N+GI FQL 
Sbjct: 156 ---ENEHERFAQYLEKTFKNTASLIANSCKAVSVLGCPDPVVHEITYQYGKNVGIAFQLI 212

Query: 225 DDLLDCEE 232
           DD+ D   
Sbjct: 213 DDVFDFTS 220


>gi|52081669|ref|YP_080460.1| transcriptional regulator [Bacillus licheniformis ATCC 14580]
 gi|52787054|ref|YP_092883.1| ComQ [Bacillus licheniformis ATCC 14580]
 gi|18266382|gb|AAL67539.1|AF459919_3 ComQ protein [Bacillus licheniformis]
 gi|52004880|gb|AAU24822.1| transcriptional regulator [Bacillus licheniformis ATCC 14580]
 gi|52349556|gb|AAU42190.1| ComQ [Bacillus licheniformis ATCC 14580]
 gi|301752359|gb|ADK89154.1| ComQ [Bacillus licheniformis]
          Length = 289

 Score = 72.5 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 22/180 (12%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           S    +   A  +GA IE +     I DDL   D+           ++ +   A+ A   
Sbjct: 40  SFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEP------WMKINRSVAMNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I    +  K+ +  + ++  T          GQ  D+ +    E +   + K
Sbjct: 94  LYTISIKVI---GSVSKEPVFFEKLMEYTLQSM-----QGQHDDLSNRPATEDECLDMIK 145

Query: 183 MKTGALMCFACESGAIMA-HASQNEKERLRCFGENLGIIFQLADDLL----DCEEDLPKK 237
            K+GAL    C  GA++A        E+   +   LGI  Q+ +D      D + D+ KK
Sbjct: 146 RKSGALTALPCVLGAMLATGKFDPTVEK---YAYQLGIASQIENDYKALFYDSKSDIAKK 202


>gi|170044368|ref|XP_001849822.1| trans-prenyltransferase [Culex quinquefasciatus]
 gi|167867554|gb|EDS30937.1| trans-prenyltransferase [Culex quinquefasciatus]
          Length = 205

 Score = 72.5 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 156 LQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
           L  ++ G+ + +  +  +       F     KT +L+  + ++ A+++ A +   E    
Sbjct: 25  LTDLVQGEFMQLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVLSGADEQMVELSFQ 84

Query: 213 FGENLGIIFQLADDLLDCEE 232
           +G NLG+ FQ  DDLLD   
Sbjct: 85  YGRNLGLAFQFVDDLLDFVS 104


>gi|322796024|gb|EFZ18648.1| hypothetical protein SINV_14286 [Solenopsis invicta]
          Length = 182

 Score = 72.1 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 155 GLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
            +  ++ G+ + +  +  +             KT +L+    ++ AI++       E   
Sbjct: 1   IVSDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKAVAILSEVDDRTIEMAF 60

Query: 212 CFGENLGIIFQLADDLLDCEE 232
            +G N+G+ FQL DDLLD   
Sbjct: 61  QYGRNVGLAFQLVDDLLDFVA 81


>gi|311261497|gb|ADP88695.1| farnesyl diphosphate synthase [Betula platyphylla]
          Length = 190

 Score = 72.1 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 68/180 (37%), Gaps = 14/180 (7%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L+ E   L N     A  +G  IE +  Y L+ DD+  MDN   RRG+P  + Q      
Sbjct: 13  LLKEGKELTNDEVFLACALGWCIEWLQAYFLVLDDI--MDNSVTRRGQPCWYRQPKVGL- 69

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           I A +G++     I    K   +       +L L + +       GQM+D+      E  
Sbjct: 70  IAANDGIILRN-HIPRILKKHFRQKPYYVDLLDLFNEVE-FQTASGQMIDLITTLEGEKD 127

Query: 177 V--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +          I + KT             +MA  +      ++     +GI FQ+ DD+
Sbjct: 128 LSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLENHVNVKDTLIEMGIYFQVQDDI 187


>gi|225163555|ref|ZP_03725865.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
 gi|224801821|gb|EEG20107.1| polyprenyl synthetase [Opitutaceae bacterium TAV2]
          Length = 136

 Score = 71.7 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +  I   KT A++  +   G ++  A +     L   G  LG+ FQ+ DD+LD   D
Sbjct: 15  LDYIHLNKTAAMIRASLVMGGLVGGADEPALATLARAGRQLGLAFQIIDDILDTTAD 71


>gi|154687280|ref|YP_001422441.1| ComQ [Bacillus amyloliquefaciens FZB42]
 gi|126362993|emb|CAM35811.1| competence protein ComQ [Bacillus amyloliquefaciens FZB42]
 gi|154353131|gb|ABS75210.1| ComQ [Bacillus amyloliquefaciens FZB42]
          Length = 286

 Score = 71.7 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 17/176 (9%)

Query: 57  LVTECASLFNVNH-LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L  +    F  N     L +G  IE +   + I DD+   D            ++ D+  
Sbjct: 24  LALDHYLAFGGNDFEEILDLGTGIELLILAADIFDDIQDKDRPN------AEWMKMDQAV 77

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           ++     + T A ++ISS   +  + +  +  L  T          GQ +D+ D  + E 
Sbjct: 78  SLNIATLIYTIALQVISS---RDPEGLLLKTALKYTVQAM-----EGQHIDLVDNTLTEN 129

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           Q   + K K+GAL   A   GA++A  ++  +  +  +   +G+  QL +DL +  
Sbjct: 130 QCIEMIKKKSGALTALASMLGAVLA--TKRYQSDVEQYAFYIGVAAQLKNDLFEIM 183


>gi|71390084|ref|XP_802181.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70858312|gb|EAN80735.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 173

 Score = 71.7 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGI 219
            G+M+ +   F D          KT +L+  +  S A++A       +E    FG++LGI
Sbjct: 1   AGEMMQMDGCF-DIESYEQKSYCKTASLIANSLASTAVLAGFPNTAYEEAAAKFGKHLGI 59

Query: 220 IFQLADDLLDCEED 233
            FQ+ DD LD   D
Sbjct: 60  AFQIVDDCLDITGD 73


>gi|304408348|ref|ZP_07389995.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304342637|gb|EFM08484.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 310

 Score = 71.0 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 29/209 (13%)

Query: 27  TASHMQTQHNDRLLSA------IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIE 80
            A H      ++L +A      I  + L GK     L      +FN       +  AA+E
Sbjct: 17  AAQHFSYHEFNKLAAACIEYKRIHSSFLFGK-----LTLLHYMMFNGTSPEIYKAAAAVE 71

Query: 81  CIHCYSLIHDDLPSMD---NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +         + S+D   +   +    ++  Q +   A+    G L  + ++I      
Sbjct: 72  LM---------ILSLDIFDDLQDQDQPQSIWSQCEPAVAMNVAIGFLMLSAKLIEQIDLP 122

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
             +  R    +    N  +   + GQ  D+ +    E +   + + K+GAL+  AC  G 
Sbjct: 123 AGNRDR----MIACFNTQVLKAVNGQFSDLNNAIYSEEEYKEMTRQKSGALVACACLVGT 178

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADD 226
           + A  +    + +  +G+++GI  Q+ +D
Sbjct: 179 LAA--TDQHADLVLQYGQHIGIAAQIKND 205


>gi|325118838|emb|CBZ54390.1| hypothetical protein NCLIV_048200 [Neospora caninum Liverpool]
          Length = 553

 Score = 70.6 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 64/221 (28%), Gaps = 51/221 (23%)

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
             A+L   +  + + +G  +E +    L+ DD+  MD+   RRGKP  +       +   
Sbjct: 242 LSAALPPSSFRSLVALGWCVELLQSCFLVMDDV--MDHSITRRGKPCWYQCEGIGVSNAV 299

Query: 120 GNGLLTYA--FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD----------- 166
            + L+  A  + I+             Q +L  +        L GQ LD           
Sbjct: 300 NDSLVLEAAVYRILREYLGDHPAYASFQDLLLGS----TFTTLIGQHLDSEDALAALAEA 355

Query: 167 -IQDEFIDETQVF----------------------------MIQKMKTG-ALMCFACESG 196
              D F  +                                   ++KT           G
Sbjct: 356 SQNDHFQSDKNSERRSASRASRSSLSPSAEVLAQSLADRQATAARLKTSHYSFYLPTALG 415

Query: 197 AIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
                          +     +G  FQ+ DD LDC  D PK
Sbjct: 416 MTYGGLTDPALMAHAKEICFAIGEYFQVQDDYLDCFSD-PK 455


>gi|322800772|gb|EFZ21658.1| hypothetical protein SINV_01398 [Solenopsis invicta]
          Length = 352

 Score = 70.6 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 81/235 (34%), Gaps = 23/235 (9%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA-------SLFNVNH 69
             I+ D +    + +     D +   ++Y + GGKKIRS  +            L   N 
Sbjct: 21  QDIVRDTMEMAKNLITPDVADWIEKMLQYTVPGGKKIRSLTLIYAYKSLVSKDQLTEDNI 80

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
                +   +E +    ++ +D+ +     +RRG+P  +   D   A I    LL     
Sbjct: 81  RLVRILAWCVELMQASLIVIEDIQN--QSLLRRGQPCWYRCNDIDKAAINDYILLQNTIY 138

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID---------ETQVFMI 180
            I     + K+   S   L  T    L   + GQ LD     +            +   I
Sbjct: 139 YILQKYFKDKECYVS---LVETFQEALFMTVMGQYLDFFSTELSKRPNLDLFTMDRYSSI 195

Query: 181 QKMK-TGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEED 233
            + K +   +         +A     N  ++      ++G +FQ+  D L+C  D
Sbjct: 196 VEYKESHYSVILPVVVAMHLAGIKDLNMFKQANVILLDIGHLFQVQIDYLNCFGD 250


>gi|198427915|ref|XP_002128884.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
           subunit 2 [Ciona intestinalis]
          Length = 410

 Score = 70.6 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 79/234 (33%), Gaps = 30/234 (12%)

Query: 18  TILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKKI---RSFLVTECASLFNVNHLTA 72
            +L D L   A H++     +  LL   R  L   K     R  +V   A     +   +
Sbjct: 71  ALLSDELSAVALHLRKLVRTKHPLLKTARGILFDSKHNVQTRGLIVLLFAKSIAQHKSAS 130

Query: 73  LRV----------GAAIECIHCYSLIH------DDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L +              E IH   L+H      D L   D+   R        +     A
Sbjct: 131 LNLNEIYNSQRTLAELTELIHTAFLVHRGLTGVDTLMKQDSNNSRSEM-----ELGNKMA 185

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI---D 173
           +++G+ LL  A   +S  +     N+ S  +  ++H   +     G   D     I    
Sbjct: 186 VLSGDFLLANACVALSELRNSKVVNMMSSSIADMSHGFFILPE-SGDSPDPTSLSILPTS 244

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
                    +  G+L+  AC S   +A+ +    E    FG+NL +  Q   D+
Sbjct: 245 RKDWEDAIFLSQGSLISNACLSAVELANQNGEFAECASSFGKNLILAQQARADM 298


>gi|189199468|ref|XP_001936071.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983170|gb|EDU48658.1| geranylgeranyl pyrophosphate synthetase [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 630

 Score = 70.6 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 17/152 (11%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +H  SL+ DD+   D   +RRG+P  H  +     I +G       +EI+++ +   +  
Sbjct: 375 LHSASLMLDDIE--DGSSLRRGQPATHTVFGTAQTINSG------CWEILNAVQETQQLG 426

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH 201
           +++  ++    +    G               E +   +   KTG L         ++  
Sbjct: 427 LKAVKIVLEELSELHIGQSYDLYWTEHSRCPSEDEYLEMVSKKTGGLFRLIVR---LLLD 483

Query: 202 ASQ------NEKERLRCFGENLGIIFQLADDL 227
           +S+      N    +      +GI +Q+ DD 
Sbjct: 484 SSESKAPKGNLHTDMGHLAGLIGIQYQIRDDY 515


>gi|322818356|gb|EFZ25796.1| polyprenyl synthase, putative [Trypanosoma cruzi]
          Length = 222

 Score = 70.6 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           E  V  I   KTGA+    C    I+  AS+ + + +  FG+ +G+ +Q+ DD+L  + 
Sbjct: 58  EDAVKFIHTCKTGAICGAICSFACILTDASEEDTQAMEEFGKAIGLAYQIIDDVLGVKG 116


>gi|307328224|ref|ZP_07607402.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306886058|gb|EFN17066.1| Polyprenyl synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 345

 Score = 70.6 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 76/212 (35%), Gaps = 12/212 (5%)

Query: 9   LQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVN 68
           L +  +     +D+ LL+         N+      R A   G+++R  LV   A   +  
Sbjct: 10  LADGLRAGQAAVDEGLLKATKSDVPFINEAARELTRTA---GRRLRPLLVLLAARFGDPG 66

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
               +     +E  H  +  HD +   D   +R G       +D   A++ G+ L   A 
Sbjct: 67  APGVVPAAVVVELTHLATHYHDGVR--DETAVRPGARGPDANWDNTVAVLIGDFLFARAS 124

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGAL 188
            I++    Q    +R Q         G      G     +D          +   +TGAL
Sbjct: 125 HILADLGPQ---AVRLQAEAFRRQVTGQILETAG----PRDGRDPVEHHLEVLAGRTGAL 177

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGII 220
              +   GA+++ A  +  + L  +GE LG+ 
Sbjct: 178 TAVSGRLGALVSGADPSAVDALARYGERLGMA 209


>gi|186704300|dbj|BAG30959.1| geranylgeranyl diphosphate synthase [Phomopsis amygdali]
          Length = 389

 Score = 70.2 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 7/150 (4%)

Query: 83  HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNI 142
           H  SL+ DD+   DN  +RR +P+ H  +     + +    +       S  +      I
Sbjct: 131 HNLSLMQDDVE--DNSPLRRSRPSTHSIFGIDQTVNSSTCGIVEVLRRSSEMQNPAFLKI 188

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
             + + SL     L  +   Q+           +   +   KTG L   A +     + +
Sbjct: 189 VIEELRSLLIGQSLDLLWTHQISTP-----SVEEYLQMVDGKTGGLFRMASKLMIAQSES 243

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           S      L      LG  FQ+ DD ++   
Sbjct: 244 SNMNPTDLDALMTLLGRYFQIRDDYMNLTS 273


>gi|258571285|ref|XP_002544446.1| farnesyl pyrophosphate synthetase [Uncinocarpus reesii 1704]
 gi|237904716|gb|EEP79117.1| farnesyl pyrophosphate synthetase [Uncinocarpus reesii 1704]
          Length = 326

 Score = 70.2 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 27/234 (11%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLS---AIRYALLGGKKIRSF------LVTE 60
           + +    + +   L+   + H Q Q+ D   S   ++     GGK  R        L   
Sbjct: 4   KTSRADFEAVFPSLVQDLSEHAQ-QYGDPYHSFGVSLNANTPGGKLNRGLSVPDSALSLL 62

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              L          +G   E +  + L+ DD+  MD    RRG+P  + +         G
Sbjct: 63  SQPLNEKQFKDLCTLGWLTELLQAFFLVSDDM--MDASITRRGEPCWYRREG------VG 114

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
              +  +F + SS    LK + RS       H   +  +        Q E      +   
Sbjct: 115 MIAINDSFMLESSIYVLLKKHFRS-------HPAYVDFLELFHETTHQTELGQLCDLLTA 167

Query: 181 QKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +  T     +   + A+  +  A+    ++       LG  FQ  DD LD   
Sbjct: 168 PEDHTAYYSFYLPVALALHYLELATPKNLKQAHDILIPLGEYFQAQDDFLDVFG 221


>gi|229543109|ref|ZP_04432169.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus
           coagulans 36D1]
 gi|229327529|gb|EEN93204.1| Geranylgeranyl pyrophosphate synthase-like protein [Bacillus
           coagulans 36D1]
          Length = 289

 Score = 70.2 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 12/175 (6%)

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            L      L      +   V A +E I     I DD    D+      +          T
Sbjct: 18  MLCVNHHHLLGGKSASVFHVAACVELIILAFNILDDWQDQDHHRSPWMQDHAGQSLTVET 77

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A       L  A   ++      K+N+  QL++   +       + GQ  DI++  + E 
Sbjct: 78  AF------LLLAMSKLNGFLGSQKNNLAFQLIVDRINRS-----VHGQFADIRNAPLKEE 126

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +   + K K+GAL   AC  GA++A  +  +   +  +   +GI  QL +DL D 
Sbjct: 127 EYIAVIKQKSGALCALACLCGAMLAG-NTTDLHLIGEYATGIGICAQLENDLDDV 180


>gi|295401745|ref|ZP_06811711.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976232|gb|EFG51844.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 310

 Score = 70.2 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 11/171 (6%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L      +F+     + R+ AA+E +     I DDL  MD   +     T   +    T+
Sbjct: 52  LAGMHYQIFSEEVKESERIAAAVELLMLAGDILDDL--MDQDSL----ETSWSKAPLTTS 105

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
                GLL    + I+          ++Q  +       L   L GQ +D+ +    ET 
Sbjct: 106 FHMAIGLLLAGQKAIADLPIDDDKKAKAQSYIL----SRLLQSLNGQHMDVTNGIQTETD 161

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              + K K+G+L+  AC  G  +A A +N    +  +  ++GI  Q+ +D+
Sbjct: 162 YLQMLKKKSGSLVAMACFVGTALAGAEKNTV-IIEKYANDIGIAAQIDNDI 211


>gi|158339096|ref|YP_001520273.1| hypothetical protein AM1_6022 [Acaryochloris marina MBIC11017]
 gi|158309337|gb|ABW30954.1| hypothetical protein AM1_6022 [Acaryochloris marina MBIC11017]
          Length = 322

 Score = 70.2 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 66/187 (35%), Gaps = 17/187 (9%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSL-IHDDLPSMDNGYIRRGKPTVHIQYDE 113
           + L          +    + V + I  +  ++L   DD+   DN         +H +   
Sbjct: 41  AILPVATGLACGGSIEQLIPVTSTIVAV-AFALRTLDDIADQDNSN------ALHQKIGI 93

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             A      L+  A   I        D+I    +++  +   L  +  GQ  DIQ E   
Sbjct: 94  GRAANFSAALIALASREIGVLSKSSPDSI----LMTGDYFDALLRIFVGQDKDIQREVRS 149

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL-----L 228
                 + ++KT A    A   GA    A  N  ++ R  G ++G   Q+ DD+     L
Sbjct: 150 LVAYEEVVELKTVAAYELAAIVGANAVTADGNFTKKCRVCGRHIGWAQQILDDIEAFWFL 209

Query: 229 DCEEDLP 235
           D  E+  
Sbjct: 210 DNAEESG 216


>gi|121715892|ref|XP_001275555.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
 gi|119403712|gb|EAW14129.1| geranylgeranyl pyrophosphate synthase [Aspergillus clavatus NRRL 1]
          Length = 700

 Score = 70.2 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 21/164 (12%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +   +L+ DD+   D   +RRG+P  H+++     + +   L   A  ++         
Sbjct: 453 MLFNSTLLLDDIE--DGSALRRGQPAAHVKFGVGQTVNSATFLHAEAVSLVLEHLGPDCL 510

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACE-S 195
           NI    + +L           GQ LD+   FI       +   +   KTG          
Sbjct: 511 NIVLDEIKTLAR---------GQALDLHWTFIQARPTVNEYLTMVDHKTGGFFRLVLRAM 561

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
           G++ + A  ++ E L      +G  +Q+ DD  +   D    KK
Sbjct: 562 GSLSSTAVDSDLEHLVTL---MGRYYQIRDDHQNLASDEYTAKK 602


>gi|312383692|gb|EFR28678.1| hypothetical protein AND_03051 [Anopheles darlingi]
          Length = 197

 Score = 69.8 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 154 IGLQGMLGGQMLDIQDEFIDET---QVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             L  ++ G+ + +  +  +       F     KT +L+  + ++ A+++ A +   E  
Sbjct: 15  AVLTDLVQGEFMQLGSKETENERFAHYFTKTYRKTASLIANSLKAVAVLSGADEQMAELS 74

Query: 211 RCFGENLGIIFQLADDLLDCEE 232
             +G NLG+ FQ  DDLLD   
Sbjct: 75  FQYGRNLGLAFQFVDDLLDFVS 96


>gi|119499223|ref|XP_001266369.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
 gi|119414533|gb|EAW24472.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
          Length = 545

 Score = 69.8 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 69/197 (35%), Gaps = 14/197 (7%)

Query: 36  NDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
           N  LL  + Y   L  K +RS +V      F + H     V   ++ +H  +LI DD+  
Sbjct: 241 NSALLDPVHYIQSLPSKNMRSKVVDALNIWFQLPHHLVDTVKGTVDDLHNSTLILDDIQ- 299

Query: 95  MDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
            D+ Y+RRG    H  +     I +   L+  A   +     Q          L      
Sbjct: 300 -DSSYLRRGFAATHHVFGSAQCINSATYLVAQAASRLIVHNEQYPA-------LITFFLD 351

Query: 155 GLQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
           GL+ +  GQ  D+  +         +   +   KTG +           + +       L
Sbjct: 352 GLKELALGQSWDLNWKSTGYCPSTEEYMAMVDGKTGVMFDMIIRMMHCFSSSQTVPVPEL 411

Query: 211 RCFGENLGIIFQLADDL 227
               + LG  +Q+ DD 
Sbjct: 412 SQLTKLLGRWYQVRDDY 428


>gi|47097726|ref|ZP_00235227.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes str. 1/2a F6854]
 gi|47013897|gb|EAL04929.1| heptaprenyl diphosphate synthase, component II [Listeria
           monocytogenes str. 1/2a F6854]
          Length = 116

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L + +Q++   ++  L   L   A+   +     LL A      GGK+IR   V   A L
Sbjct: 6   LYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEA------GGKRIRPMFVCLSARL 59

Query: 65  F-NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
             N +         AIE IH  S++H     +D+  +RRG+ T+  +     A+  G+ 
Sbjct: 60  AANADFNAVKNASVAIELIHMASIVH--DDVVDDADLRRGRETIKSKCGNHIAMYTGDF 116


>gi|42572937|ref|NP_974565.1| FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2);
           dimethylallyltranstransferase/ geranyltranstransferase
           [Arabidopsis thaliana]
 gi|332658459|gb|AEE83859.1| farnesyl diphosphate synthase 2 [Arabidopsis thaliana]
          Length = 247

 Score = 69.0 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 17/155 (10%)

Query: 95  MDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           MDN   RRG+P    +      AI  G  L  +   I+   K   ++      ++ L + 
Sbjct: 1   MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRIL---KKHFREMPYYVDLVDLFNE 57

Query: 154 IGLQGMLGGQMLDIQDEFIDETQV----FMIQK----MKTGAL-MCFACESGAIMAHASQ 204
           +  Q    GQM+D+   F  E  +      I +     KT             +MA  + 
Sbjct: 58  VEFQTAC-GQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENL 116

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                ++    ++GI FQ+ DD LDC  D   L K
Sbjct: 117 ENHTDVKTVLVDMGIYFQVQDDYLDCFADPETLGK 151


>gi|164657195|ref|XP_001729724.1| hypothetical protein MGL_3268 [Malassezia globosa CBS 7966]
 gi|159103617|gb|EDP42510.1| hypothetical protein MGL_3268 [Malassezia globosa CBS 7966]
          Length = 200

 Score = 69.0 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 9/167 (5%)

Query: 25  LQTASHMQTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           +  A     ++   +L    Y   L GK+ RS L+       +V      ++   +  +H
Sbjct: 29  VSEAFAWPPENEKHVLEPYAYLEQLPGKEFRSKLLDAFRVWLDVPENALEQIKGMVRRLH 88

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
             SL+ DD+   D   IRRG P+ H  +     I   N +    F++++    QL+    
Sbjct: 89  NASLMMDDVE--DQSEIRRGAPSAHEVFGIAQTINTANYVY---FQVLADM-AQLEPRAL 142

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
            +L+  L      QGM       ++     E     +   KTG L  
Sbjct: 143 PELIHELGWLHRGQGMELYWREHVECP--SEEAYVDMVIHKTGGLFR 187


>gi|313636097|gb|EFS01975.1| polyprenyl synthetase [Listeria seeligeri FSL S4-171]
          Length = 157

 Score = 68.7 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
              KT  L   +C SGA  + AS+    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 3   ISGKTAQLFALSCYSGATGSKASRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 58


>gi|296133277|ref|YP_003640524.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermincola
           sp. JR]
 gi|296031855|gb|ADG82623.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermincola
           potens JR]
          Length = 526

 Score = 68.7 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 81/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTE 60
           M  G    +  + + ++ I++        ++   +  R+     Y +   K +   ++  
Sbjct: 1   MAAGFLDTINSDLQAVEAIINKAFKIKPGYIG--NFARIDD--DYPV---KYLHPAVIIL 53

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
              +F +       + A I+ I+  + +H  +P  D            ++      ++ G
Sbjct: 54  TGRMFGLYEEKLYSMAAIIQFIYLAANVHFRIPDYDPDP-----AETDVKDGVQYPVLVG 108

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + L    F  +   +        + ++  +     + G+L  Q    ++E +      ++
Sbjct: 109 DYLYGRFFTTLCKGQIIHLLEPLADIICEMN----VGGILRTQNYQSREEKL------VV 158

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            + ++ +L+   C     +A  S  + + +  FG N+G+ +
Sbjct: 159 IEKESASLLREGCRLTGSLAGVSAQDLDNIGNFGYNIGMGY 199


>gi|325129055|gb|EGC51905.1| geranyltranstransferase [Neisseria meningitidis N1568]
          Length = 143

 Score = 68.7 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 159 MLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMA-HASQNEKERLRCFGE 215
           M GGQ +D+ +      +  +  +  +KTGAL+  A   GA+   + S++    L  +  
Sbjct: 1   MAGGQAIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDAYAA 60

Query: 216 NLGIIFQLADDLLDCEEDLP 235
            LG+ FQ+ DD+LDCE D  
Sbjct: 61  KLGLAFQVIDDVLDCEADTA 80


>gi|242827321|ref|XP_002488809.1| geranylgeranyl diphosphate synthase, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218712065|gb|EED11493.1| geranylgeranyl diphosphate synthase, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 745

 Score = 68.7 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 19/169 (11%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
              V      R+      +H  SL+ DD+   D   +RRGK + H  +     + A N  
Sbjct: 478 WCRVPAAKVDRIKLVTNMLHNTSLMLDDME--DGSTLRRGKSSTHTIFGAGQTVNAANYQ 535

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI----DETQVFM 179
           +  A E +     +    I ++ +         + +  GQ LD+            + F 
Sbjct: 536 IIRALEEVQKLGDKESVMIFTEEL---------KNLYIGQSLDLHWTNNVICPTVDEYFR 586

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER-LRCFGENLGIIFQLADDL 227
           + + KTG L       G +++  S N  +  L    +N G  +Q  DD 
Sbjct: 587 MVEHKTGGLFRL---FGRLLSLHSTNPVKADLTSLLDNFGRYYQTRDDY 632


>gi|330806141|ref|XP_003291032.1| hypothetical protein DICPUDRAFT_38388 [Dictyostelium purpureum]
 gi|325078829|gb|EGC32460.1| hypothetical protein DICPUDRAFT_38388 [Dictyostelium purpureum]
          Length = 364

 Score = 68.7 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 66/211 (31%), Gaps = 29/211 (13%)

Query: 49  GGKKIRSFLVTECASLFNV----NHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           GGK +R   V      F      +  T       G  IE +    LI DD+  MD G +R
Sbjct: 53  GGKYMRGLSVLNTIKDFKGVEQLDEETIFLGRVAGWCIEFLQASLLIADDI--MDGGIMR 110

Query: 102 RGKPTVHIQYD------EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT---H 152
           R +P  H   +             G   +  AF + S     LK   R +   +     +
Sbjct: 111 RDRPCWHHYPNPLIKNLNGVEQPIGKIAVNDAFIMESCIYILLKKYFREKPYYTKMLELY 170

Query: 153 NIGLQGMLGGQMLDIQDEF--------IDETQVFMIQKMKT-GALMCFACESGAIMAHAS 203
           +        GQ+ D              +    F I + KT           G +M   +
Sbjct: 171 HEISHNTFLGQLFDTSACHSLKGDFSSFNLKNYFQIARFKTSYYTFYTPVALGMLMCGIN 230

Query: 204 --QNEKERLRCFGENLGIIFQLADDLLDCEE 232
               + + ++     +G      DD LDC  
Sbjct: 231 YLDPQYDAMKELLLEIGEYMTAQDDYLDCYG 261


>gi|46241300|gb|AAS82870.1| geranyl diphosphate synthase small subunit [Clarkia breweri]
          Length = 300

 Score = 68.3 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 85/226 (37%), Gaps = 26/226 (11%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKI-RSFLVTECASLF 65
           + L      I+  +D  L    + +  +    +   + +  L   +     L      L 
Sbjct: 28  ATLSTYWDSINDKIDGHL---KAAVPVRKPLSVFEPLHHLTLAAPRSSAPALCIAACELV 84

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             +   A+   AA+  IH    +H           R  +      +     ++ G+G+L 
Sbjct: 85  GGSSSQAMDAAAALHLIHASLSVH----------KRLYRGGSGSGFGSNIELLTGDGMLP 134

Query: 126 YAFEIISS---PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ---------DEFID 173
            AFE++++      + +     ++++ ++   G +G+L G+  ++Q          ++ D
Sbjct: 135 LAFELLANSEGAGDESRSRRILRVIVEISKAAGSEGLLKGEYNELQLGRLAGFTGGDWRD 194

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              +  +   K G L   A   G I+   ++ E E+LR  G  +G+
Sbjct: 195 AFWMDHVCGKKEGGLHACAAACGGILGGGTEEEIEKLRKLGYLVGM 240


>gi|226468294|emb|CAX69824.1| trans-hexaprenyltranstransferase [Schistosoma japonicum]
          Length = 176

 Score = 68.3 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 177 VFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                  KT +L+  +C++ A++     SQ   + +  FG++LG+ FQL DD+LD   D 
Sbjct: 18  YLTKTYRKTASLIANSCKAVAMLTVPTLSQRHIDDMYDFGKHLGMAFQLIDDVLDFVTDE 77

Query: 235 PK 236
            K
Sbjct: 78  AK 79


>gi|221119260|ref|XP_002166810.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
           subunit 1 [Hydra magnipapillata]
          Length = 186

 Score = 68.3 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                   KT +LM  +C+S A++A+ S   ++    +G+NLG+ FQL DD LD   
Sbjct: 28  HYLTKTFRKTASLMANSCKSVALLANCSSIVQDMAFEYGKNLGMAFQLVDDALDIIS 84


>gi|330918492|ref|XP_003298243.1| hypothetical protein PTT_08883 [Pyrenophora teres f. teres 0-1]
 gi|311328676|gb|EFQ93661.1| hypothetical protein PTT_08883 [Pyrenophora teres f. teres 0-1]
          Length = 723

 Score = 67.9 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 17/183 (9%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K +R   V       +V   T L + +    +   SL+ DD+   D   +RR  P  H  
Sbjct: 437 KGVRDVFVDALNVWLDVPTPTILHIKSISNRLQSASLMLDDIE--DGSSLRRSHPATHTV 494

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I +G       +EI+++ +   +    +  ++    +    G            
Sbjct: 495 FGTAQTINSG------CWEILNAVQETQQLGPEAVKIVLEELSELHIGQSYDLYWTQHSC 548

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER------LRCFGENLGIIFQLA 224
              E +   +   KTG L         ++   S+++  +      +      +GI +Q+ 
Sbjct: 549 CPSEDEYLEMVSKKTGGLFRLIVR---LLLDGSESKAPKGHLHTDMGHLASLIGIQYQIR 605

Query: 225 DDL 227
           DD 
Sbjct: 606 DDY 608


>gi|89574388|gb|ABD77411.1| geranylgeranyl diphosphate synthase [Zingiber officinale]
          Length = 112

 Score = 67.9 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE---EDLPK 236
              +   GAI+  AS ++ ERLR +  ++G++FQ+ DD+LD     E+L K
Sbjct: 2   FRGSVVLGAIVGGASDDQIERLRKYARSIGLLFQVVDDILDVTKSSEELGK 52


>gi|302543684|ref|ZP_07296026.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
          53653]
 gi|302461302|gb|EFL24395.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
          53653]
          Length = 86

 Score = 67.9 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 20 LDDLLLQTASHMQTQHNDRLLSAIRYALLG-GKKIRSFLVTECASLFNVNHLTALRVGAA 78
          L  LL    S   +   +R+    RYALL  GK +R  L+ E A      +  +L     
Sbjct: 15 LARLLRDLESRWPSDG-ERVHRISRYALLPAGKLLRPLLLVESARAVGGGYEESLPAALG 73

Query: 79 IECIHCYSLIHDD 91
          +E +H  SL+HDD
Sbjct: 74 VEYLHAGSLVHDD 86


>gi|115928216|ref|XP_785706.2| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
           subunit 2 [Strongylocentrotus purpuratus]
 gi|115934945|ref|XP_001190717.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
           subunit 2 [Strongylocentrotus purpuratus]
          Length = 562

 Score = 67.9 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 24/219 (10%)

Query: 19  ILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKK---IRSFLVTECASLF-------- 65
           +L D L   A HM+     +  LL   +  L  GK     R  ++   +           
Sbjct: 169 LLSDELANVALHMRKLVGAKHPLLKTAKNFLTDGKHSLQTRGLIILLISKAATPIDSKQV 228

Query: 66  ---NVNHLTALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                 + +   +    E IH   L+H    +L ++D        P   ++     A+++
Sbjct: 229 PPSGGIYASQRALAEISEMIHTAFLVHRGVVNLLNLDPAT----GPINVMEMGNKMAVLS 284

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVF 178
           G+ LL  A + ++  +      + S+ +  LT    +  G      +      +      
Sbjct: 285 GDFLLASACKALAGLRNTTVVELISKAIGHLTEAAFMRFGNADLSPIATIQPGLTFLDWE 344

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
               + +G L+  +C     + + SQ   E    FG+N+
Sbjct: 345 RYVYLSSGTLIGHSCRGALELTNHSQALTESAYDFGKNI 383


>gi|119481385|ref|XP_001260721.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
 gi|119408875|gb|EAW18824.1| geranylgeranyl pyrophosphate synthase [Neosartorya fischeri NRRL
           181]
          Length = 702

 Score = 67.5 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 50/160 (31%), Gaps = 13/160 (8%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +   +L+ DD+   D   +RRGKP  H+++     +     L   A             
Sbjct: 454 MLFNSTLLLDDIE--DGSTLRRGKPAAHLKFGLGQTVNTATFLHAEAVGYTLEHLGPDCL 511

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            I    + +L     L                   + F++   KTG            ++
Sbjct: 512 KIVLDEIKTLARGQALD-----LNWTFNKTRPTLNEYFIMVDHKTGGFFRLLLRGLCSLS 566

Query: 201 HAS-QNEKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
            +    + E L      +G  +Q+ DD  +   D    KK
Sbjct: 567 GSGLDPDLEHLITL---IGRYYQIRDDYQNLASDEYTAKK 603


>gi|14422404|dbj|BAB60821.1| putative FPP synthase 1 [Eucommia ulmoides]
          Length = 305

 Score = 67.5 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 33/211 (15%)

Query: 45  YALLGGKKIRSFLVTECASLFNV-------------NHLTALRVGAAIECIHCYSLIHDD 91
           Y + GGK  R   V +   L                    +  +G  IE +   +L+ DD
Sbjct: 4   YNVPGGKLNRGLSVVDSYKLLKELSSSKKGAQLTESEIFHSSVLGWCIEWLQACALVLDD 63

Query: 92  LPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT 151
           +  MD+ + RRG+   +        I   +GL+     +    K   +       +L L 
Sbjct: 64  I--MDSSHTRRGQMCWYKLPKVGM-IAINDGLILRN-HVPRILKKHFRSKPYYLELLDLF 119

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKT-GALMCFACESGAIMAHA 202
           H +     +GGQM+D+    + E  +          I   KT             +M   
Sbjct: 120 HEVE-CQTVGGQMIDLITTLVGEIDLSEYSLPTHRQITVSKTSYYSFYLPVACALLMTGE 178

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                  ++           + DD LDC  D
Sbjct: 179 KLESHSGMKDILIE------IQDDYLDCFGD 203


>gi|317030986|ref|XP_001392584.2| polyprenyl synthetase [Aspergillus niger CBS 513.88]
          Length = 515

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 14/181 (7%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K  R+ L+      + V   +   +      +H  SL+ DD+   D+  +RRGKP VH  
Sbjct: 198 KGFRNHLIDALQEWYKVPQASLAVISGVASLLHEASLMLDDIQ--DDSPLRRGKPAVHTI 255

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I +    +  A  +             + L+ S + +  +  +  GQ  D+Q  
Sbjct: 256 FGVGQTINSARFHINNALRLCLQLSPS------ASLIFSASISDQIAQLFTGQAHDLQWA 309

Query: 171 F----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
                  E   F +   K GAL+        +   A+QN    L  F   +G   QL DD
Sbjct: 310 RHKSIPTEEDYFRMVDGKNGALLILISRL--MQNEATQNRTLDLTHFMNLIGRSHQLRDD 367

Query: 227 L 227
            
Sbjct: 368 Y 368


>gi|322376314|ref|ZP_08050807.1| putative farnesyl pyrophosphate synthetase/
           geranyltransferase/farnesyltransferase/hexaprenyl
           diphosphate synthase [Streptococcus sp. M334]
 gi|321282121|gb|EFX59128.1| putative farnesyl pyrophosphate synthetase/
           geranyltransferase/farnesyltransferase/hexaprenyl
           diphosphate synthase [Streptococcus sp. M334]
          Length = 321

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 90/224 (40%), Gaps = 25/224 (11%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           L S+ ++   RID+++  +L +    +  Q+++ L       ++ G + R  L      L
Sbjct: 9   LNSEEKDFLFRIDSMIKSILFE----LPVQYHEILQ------VVNGSRFRPLLTYYGYKL 58

Query: 65  FNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           F+ N +    +   AIE IH  S+I      +D    R    TVH QY    A++    L
Sbjct: 59  FSENLNEKVYKSAIAIELIHKSSIII--DDIIDQDDKRHSIYTVHKQYSIDEALVITVFL 116

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ-DEFIDETQVFMIQK 182
           L    E++S                    +  +  M  G + ++  D  +   ++  I  
Sbjct: 117 LGKCIELLSEIDDS----------TIRVFSRMIIRMCQGTIQELNIDMNVSIDKIKEILD 166

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
            +T  ++      G + ++  + + + L   G  LG +FQL +D
Sbjct: 167 NQTSQVIQNCLVIG-MKSYDPELDNQHLAIIGYKLGYLFQLLND 209


>gi|138895709|ref|YP_001126162.1| Pre-ComX modifying enzyme [Geobacillus thermodenitrificans NG80-2]
 gi|196250964|ref|ZP_03149647.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
 gi|134267222|gb|ABO67417.1| Pre-ComX modifying enzyme [Geobacillus thermodenitrificans NG80-2]
 gi|196209528|gb|EDY04304.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
          Length = 310

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 11/166 (6%)

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
             +F+ N     R+ A++E +     + DDL   D         T   +    T++    
Sbjct: 57  YQMFSENMKETERIAASVELMMLAGDMLDDLVDQD------SLETTWNKAPLTTSLHIAI 110

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
           GLL    + I           ++QL +S      L   + GQ +D+  +   E +   + 
Sbjct: 111 GLLLAGQKAIVDLLIDDHKKAKAQLYIS----SRLLQSVNGQHMDVTYDIQTEAEYIEMV 166

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K K+G+L+  AC  G  +A A +N    +  +  ++GI  Q+ +D+
Sbjct: 167 KKKSGSLVAMACFVGTALAGAEKNTV-IIEKYANDIGIAAQIENDI 211


>gi|296330769|ref|ZP_06873245.1| ComQ [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305675758|ref|YP_003867430.1| isoprenyl-trasferase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152083|gb|EFG92956.1| ComQ [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305414002|gb|ADM39121.1| isoprenyl-trasferase (ComX modification) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 286

 Score = 67.1 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDKDNGN------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + K    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPK---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|322704302|gb|EFY95899.1| farnesyl pyrophosphate synthetase 1 [Metarhizium anisopliae ARSEF
           23]
          Length = 379

 Score = 66.7 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 69/198 (34%), Gaps = 20/198 (10%)

Query: 50  GKKIRSFLVTECASLFNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
           GK  R             N            +   +E +  + LI DD+  MD+   RRG
Sbjct: 47  GKLHRGLATLYIGKQLAKNEVSEEQSKQLSVLAWLVEMLGAHYLILDDI--MDDSTTRRG 104

Query: 104 KPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           +P  + Q      AI     L +  F ++   KT  + +     M+ L  + GL   L G
Sbjct: 105 EPCWYRQPQIGLMAINDACILKSTIFFLL---KTFFRQHPAYTNMVDLFVDNGLHTEL-G 160

Query: 163 QMLDIQDEF------IDETQVFMIQKMKTGALMCFACESGA-IMAHASQNEKERLRCFGE 215
           Q+ D+              Q + I K K+   +             A+     + R F  
Sbjct: 161 QLCDLAAAREPDIANFTMEQYWAIVKDKSSYSISGPVTLALEYWQLATPKNLRQTRDFSV 220

Query: 216 NLGIIFQLADDLLDCEED 233
            LG  FQ+ DD +D   D
Sbjct: 221 ALGEYFQVNDDYVDVFGD 238


>gi|83774491|dbj|BAE64614.1| unnamed protein product [Aspergillus oryzae]
          Length = 395

 Score = 66.7 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 19/165 (11%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
             H  SL+ DD+   D+   RRG P  H+ Y     +   +     AF         L +
Sbjct: 144 LFHS-SLMLDDIQ--DDSSKRRGMPAAHVMYGVGQTVNCVSYTGAKAF--------FLCE 192

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESG 196
            +++           L  +  GQ L++  +F           ++   KT           
Sbjct: 193 ELKNANACRKALYDELDNLFSGQALELHWKFHKTCPSMNDYIIMIDNKTAGFFRLVLRMM 252

Query: 197 AIMAHASQNEKER--LRCFGENLGIIFQLADDLLDCEEDL--PKK 237
           A  A  S + +++  L  F   LG  +Q+ DD  +   D    KK
Sbjct: 253 AAEASVSMSLEKKNTLLHFITLLGRYYQIRDDYQNLVSDEYAAKK 297


>gi|169829787|ref|YP_001699945.1| transcriptional regulator of comG and srfA [Lysinibacillus
           sphaericus C3-41]
 gi|168994275|gb|ACA41815.1| transcriptional regulator of comG and srfA [Lysinibacillus
           sphaericus C3-41]
          Length = 297

 Score = 66.7 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 20/178 (11%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK           +  N  +    ++ AA+E +     I DDL   D+       P    
Sbjct: 42  GK----LCCLHFEAFSNSRNNDIYKIAAAVELLILSFDIIDDLQDKDSDNSWSRTP---- 93

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                 ++     +L  A + I   +T  +    +  +L           + GQ LD+ +
Sbjct: 94  ----ELSLNVALAMLIMASKTI--DETSFEHKRAAIKILEEC----ALKSISGQQLDLLN 143

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              DE     +  +K+G+L   +C  G ++A       + +  +G+ +GII Q+ +D+
Sbjct: 144 NCRDEDSYVQMITLKSGSLTAMSCLIGEVLAKG--EVSQEVEAYGKYIGIIQQIKNDI 199


>gi|328863742|gb|EGG12841.1| hypothetical protein MELLADRAFT_87140 [Melampsora larici-populina
           98AG31]
          Length = 331

 Score = 66.7 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 84/234 (35%), Gaps = 22/234 (9%)

Query: 18  TILDDLLLQTASHMQTQHNDR--LLSAIRYALLG---GKKIRSFLVTECASLFNVNHLTA 72
           +I DD+L Q  +  +   +D+  +L    Y  LG    K++ S +       + V     
Sbjct: 2   SIYDDILKQFPTIDEWSDSDQKIMLEPYTY--LGINTAKELPSMVTKALNHWYQVPQPAL 59

Query: 73  LRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN---GLLTY--- 126
             V   +  IH   L+ DD+   D+  +R G P  H  Y     I        LL+Y   
Sbjct: 60  DIVLQIVGPIHAACLLIDDIQ--DDSDLRGGNPVAHKVYGVAQTINTATVTTLLLSYVCF 117

Query: 127 -AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKM 183
            A+  IS  +  LK      L   +   I          L  +D  I   E +   +   
Sbjct: 118 DAYHKISELRPFLKSPETIDLWSIINDEIAALHRGQWIDLYWRDSLICPTEEEYLRMIHN 177

Query: 184 KTGALMCFACESGAIMAHASQ-NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           KTGA+          ++      +   L      +GI+ Q+ +DLL    D  K
Sbjct: 178 KTGAIFRLPMRLLQALSPVDSVPDCFPLVNI---VGILVQIRNDLLSLSADFTK 228


>gi|302496364|ref|XP_003010184.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Arthroderma
           benhamiae CBS 112371]
 gi|291173724|gb|EFE29544.1| geranylgeranyl pyrophosphate synthetase AtmG, putative [Arthroderma
           benhamiae CBS 112371]
          Length = 347

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D+ ++RRG P  H  +     I + N +   A + I   K+    NI  + +++
Sbjct: 86  DDVE--DSSHLRRGAPVAHNIFGIPQTINSANYVYFQALDEIQKLKSPEAINIFVKELMN 143

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
           L    G+        L  +D      E     +   KTG L   A +     +    +  
Sbjct: 144 LHRGQGM-------DLYWRDTLTCPTEEDYLEMVGNKTGGLFRLAIKLMQAESSVPIDCV 196

Query: 208 ERLRCFGENLGIIFQLADDLLDC 230
             +      +G++FQ+ DD L+ 
Sbjct: 197 PLVD----LMGLMFQVCDDYLNL 215


>gi|297197217|ref|ZP_06914614.1| predicted protein [Streptomyces sviceus ATCC 29083]
 gi|297146633|gb|EFH28249.1| predicted protein [Streptomyces sviceus ATCC 29083]
          Length = 277

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 10/102 (9%)

Query: 16  IDTILDDLLLQTASHMQTQHN---DRLLSAIR-YALLGGKKIRSFLVTECASLFNVNH-- 69
           + ++L DLL Q  +  +       + L + +  +   GG   RS LV             
Sbjct: 145 VRSVLGDLLDQRLAAAEAVDPLFGEELAARVAGFTRSGGGLGRSRLVWWALRACGGAEPW 204

Query: 70  --LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
               ALR+GAA+E I   +L+HDD+  MD   +RRG+P++H+
Sbjct: 205 RTHAALRIGAALELIQTCALVHDDV--MDGARLRRGRPSLHV 244


>gi|303312145|ref|XP_003066084.1| pyrophosphate synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105746|gb|EER23939.1| pyrophosphate synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320040065|gb|EFW21999.1| geranylgeranyl pyrophosphate synthetase [Coccidioides posadasii
           str. Silveira]
          Length = 467

 Score = 66.3 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 20/197 (10%)

Query: 48  LGGKKIRSFLVTECASLFNVNHLTALRVG-AAIECIHCYSLIHDDLPSMDNGYIRRGKPT 106
           L GK+     +       +V   +   +   A + +   SL+ DD+   D   +RRG P 
Sbjct: 177 LPGKRTIPKFIGALQDWLHVPLTSMKIIENIATDMV-NVSLMLDDIQ--DGSELRRGFPA 233

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            H+ Y     I +   +L  A E +   K +    +  +           + +  GQ  D
Sbjct: 234 AHVIYGCSQTINSSTYILVKAVERLQRLKNEECRVVFYEE---------SRNLCVGQGFD 284

Query: 167 IQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +                +   KTG+    A       A +S    E  +     +G  +Q
Sbjct: 285 LYWRHHVQCPSVDDYITMVDNKTGSFFRLATRLMVAAAPSSFGSAELFQLVSL-MGRYYQ 343

Query: 223 LADDLLDCEEDL--PKK 237
           + DD  +   D    KK
Sbjct: 344 IRDDYQNLASDEYAAKK 360


>gi|115756240|ref|XP_001201735.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
           subunit 2, partial [Strongylocentrotus purpuratus]
 gi|115937791|ref|XP_785589.2| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
           subunit 2, partial [Strongylocentrotus purpuratus]
          Length = 295

 Score = 66.3 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 24/219 (10%)

Query: 19  ILDDLLLQTASHMQTQHNDR--LLSAIRYALLGGKK---IRSFLVTECASLF-------- 65
           +L D L   A HM+     +  LL   +  L  GK     R  ++   +           
Sbjct: 76  LLSDELANVALHMRKLVGSKHPLLKTAKNFLTDGKHSLQTRGLIILLISKAATPIDSKQV 135

Query: 66  ---NVNHLTALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
                 + +   +    E IH   L+H    +L ++D        P   ++     A+++
Sbjct: 136 PPSGGIYASQRALAEISEMIHTAFLVHRGVVNLLNLDPAT----GPINVMEMGNKMAVLS 191

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGL-QGMLGGQMLDIQDEFIDETQVF 178
           G+ LL  A + ++  +      + S+ +  LT    +  G      +      +      
Sbjct: 192 GDFLLASACKALAGLRNTTVVELISKAIGHLTEAAFMRFGNADLSPIATIQPGLTFLDWE 251

Query: 179 MIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
               + +G L+  +C     + + SQ   E    FG+N+
Sbjct: 252 RYVYLSSGTLIGHSCRGALELTNHSQALTESAYDFGKNI 290


>gi|294952248|ref|XP_002787262.1| Heptaprenyl diphosphate synthase component II, putative [Perkinsus
           marinus ATCC 50983]
 gi|239902099|gb|EER19058.1| Heptaprenyl diphosphate synthase component II, putative [Perkinsus
           marinus ATCC 50983]
          Length = 229

 Score = 66.0 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 16/139 (11%)

Query: 23  LLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALR------- 74
           +L    +   T  + RL  +  YA    GK  RS +V   A +      +  R       
Sbjct: 38  ILDCCEADAHTVGSQRLKESSAYAFKASGKMARSRVVLLMADVAAEVPPSLSRRKDSRIT 97

Query: 75  ------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
                 +   IEC H  SL+HDD+  +D    RRG       Y    A+  G+ +++   
Sbjct: 98  AAKQSLLAEVIECEHNASLLHDDV--VDEAATRRGLEISFSLYGNQQAVWTGDFIISVMI 155

Query: 129 EIISSPKTQLKDNIRSQLM 147
             +S           +  M
Sbjct: 156 GCLSKINEPRVTARIASSM 174


>gi|134075547|emb|CAK45077.1| unnamed protein product [Aspergillus niger]
          Length = 368

 Score = 66.0 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 59/181 (32%), Gaps = 22/181 (12%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           ++        V       +  A+  +   SL+  D+   D   +RR +P  H  +     
Sbjct: 102 MLLALNEWLEVPEKKLQVIVRAVNLLLTASLLIGDIE--DGSLLRRRQPVTHKVFGVAQT 159

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           I + N       + +          I ++ +L+L    G+       ++        E +
Sbjct: 160 INSANHTYFLVQQCVQQLGNPQVVEIFTEELLNLHRGQGMDLFWRETLICP-----TEEE 214

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC-----FGENLGIIFQLADDLLDCE 231
              +   +TG L   A             + E LR       G  +G+IF++ DD  +  
Sbjct: 215 YLDMISNRTGRLFRLAIR---------PLQAESLRTSFCALVGL-IGLIFRIQDDFKNLW 264

Query: 232 E 232
            
Sbjct: 265 S 265


>gi|212638393|ref|YP_002314913.1| competence regulatory protein comQ [Anoxybacillus flavithermus WK1]
 gi|212559873|gb|ACJ32928.1| Competence regulatory protein ComQ [Anoxybacillus flavithermus WK1]
          Length = 296

 Score = 66.0 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 88/223 (39%), Gaps = 28/223 (12%)

Query: 7   SKLQENSKRIDTILDDLL--LQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
           S+ ++ +K++  I++ L+   Q  +HM       +  +    + G       L      +
Sbjct: 2   SEKEKIAKQMKEIVEQLMSEPQLKAHMLMAIEQHMKES--DLVFG------RLAYLHYDM 53

Query: 65  FNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
           F+      + + AA+E I     + DD+  +D   +            E TAI     + 
Sbjct: 54  FSKQEHPFIYIAAAVELIVLAGDLFDDV--VDQDRL------------EDTAIPLHIAIG 99

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
                  +     +  N + + +  +T    L   + GQ  D+  +   E +   + + K
Sbjct: 100 FLLLGQQAIANVPISSNKKLKALSYVTSC--LLQSVHGQQTDVTCDVQTEAEYIKMVEKK 157

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +G+L+  AC  GA++A   + +   +  +   +GI  Q+ +DL
Sbjct: 158 SGSLVAMACVIGALLAG--KEDIAAIETYASYIGIAAQIDNDL 198


>gi|166835937|gb|ABY90139.1| farnesyl diphosphate synthase [Bupleurum chinense]
          Length = 155

 Score = 66.0 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 58/160 (36%), Gaps = 14/160 (8%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +G  IE +  Y L+ DD+  MD  + RRG+P           I   +G+L     I    
Sbjct: 1   LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCWFRVPKVGM-IAVNDGILLRN-HIPRIL 56

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTG 186
           K   +       +L L + +  Q    GQM+D+    + E  +          I + KT 
Sbjct: 57  KKHFRQKPYYVDLLDLFNEVEFQTAC-GQMIDLITTLVGEKDLSKYSLPIHRRIVQYKTA 115

Query: 187 AL-MCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
                       +MA     +   ++     +G  FQ+ D
Sbjct: 116 YYSFYLPVACALLMAGEDLEKHNNVKDVLIEMGTYFQVQD 155


>gi|70939047|ref|XP_740118.1| farnesyl pyrophosphate synthase [Plasmodium chabaudi chabaudi]
 gi|56517608|emb|CAH76315.1| farnesyl pyrophosphate synthase, putative [Plasmodium chabaudi
           chabaudi]
          Length = 255

 Score = 66.0 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 70/241 (29%), Gaps = 36/241 (14%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF------NVNHL 70
           D  L+ +          QH  +      Y  LGGK  R  LV             N    
Sbjct: 7   DAFLEHIGELVLEDHIKQHILKYYKVFDYNCLGGKNNRGILVILIYEYVKNIDINNSEWE 66

Query: 71  TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT----- 125
            A  +   IE +    L+ DD+  MD G  RR K   ++  D  T     + LL      
Sbjct: 67  KAACLAWCIEILQASFLVADDI--MDKGETRRNKHCWYLLKDVETKNAVNDCLLLSNAIY 124

Query: 126 -----------------YAFE---IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
                             AF    + +     L  NI S       + + +  +   +  
Sbjct: 125 KIIEIYLGNDACYNNIIAAFRDTVLKTIIGQHLDTNIFSNKYADPNNGVDINNITVPEQA 184

Query: 166 DIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAH--ASQNEKERLRCFGENLGIIFQ 222
            I  + I+      +   KT           G  ++         +++      +G  FQ
Sbjct: 185 AINTKMINFDVYKNVVVHKTAYYSFFLPISCGMHLSGIAMDNLLYKKIEDISIMMGEYFQ 244

Query: 223 L 223
           +
Sbjct: 245 V 245


>gi|322784733|gb|EFZ11559.1| hypothetical protein SINV_02852 [Solenopsis invicta]
          Length = 315

 Score = 66.0 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 71/219 (32%), Gaps = 33/219 (15%)

Query: 39  LLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDD 91
           +   ++Y + G KK+ S  +     L   N             +   +E    Y ++ DD
Sbjct: 5   ITQVLQYNVSGTKKLHSLTLIYAYKLIASNEQQTQDNIYLVRILAWCLEMAMAYLVMIDD 64

Query: 92  LPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSP--KTQLKDNIRSQLML 148
           +  MD    RRG+P  +   D    AI  G  + +  + +I       +  DN      L
Sbjct: 65  I--MDRSLFRRGQPCWYRHDDIGLMAINDGLLVESTVYYLIRKYFKGKECYDN------L 116

Query: 149 SLTHNIGLQGMLGGQMLDIQDEF-------IDETQVFMIQKMKTGALMCFACESGAIMAH 201
             T    +  +L GQ LD+   F           Q   I K K    +          A 
Sbjct: 117 VETFQQVIFKILIGQFLDMSSTFKKSNLDQFTMNQYNSIAKWKGYGTLFVPTVLAMHFAG 176

Query: 202 ASQNEK-----ERLRCFGENLGIIFQLADDLLDCEEDLP 235
              +E        L      L   +Q+ DD L C  D  
Sbjct: 177 TKDSEIFKQSETILSELIIPL---YQIQDDYLGCFGDFE 212


>gi|297528712|ref|YP_003669987.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
 gi|297251964|gb|ADI25410.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
          Length = 279

 Score = 66.0 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 64/170 (37%), Gaps = 18/170 (10%)

Query: 58  VTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAI 117
                 LF++    +  + AAIE I     + DD+   D               D    +
Sbjct: 29  AYLHYDLFSIQGDHSTYIAAAIELIVLAGDLLDDIVDQDR------------FEDTAIPL 76

Query: 118 IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV 177
               G L  A + I++        +++   ++      L   + GQ  D+  +   E   
Sbjct: 77  HIAIGFLLLAQQAIANVPISSNKKLKALSYVT----SCLLQSVHGQQTDVACDVQTEADY 132

Query: 178 FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             + + K G+L+  AC  GA++A   + +   +  +   +GI  Q+ +DL
Sbjct: 133 LKMVEKKAGSLVAMACVIGALLAG--KEDIAAIETYARYIGIAAQIDNDL 180


>gi|18307873|gb|AAL67730.1|AF456135_1 pre-ComX modifying enzyme [Bacillus mojavensis]
          Length = 286

 Score = 66.0 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +  A IE +     I+DDL   DN      +  V ++ D   
Sbjct: 33  LALHHYLAFNGQDKKAIELLAAGIELLILSFDIYDDLEDKDN------RNAVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMRQASHEPE---FSQKILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 TCLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|126650453|ref|ZP_01722676.1| ComQ [Bacillus sp. B14905]
 gi|126592609|gb|EAZ86608.1| ComQ [Bacillus sp. B14905]
          Length = 297

 Score = 66.0 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       F+ + +    ++ AA+E +     I DDL   D+       P          
Sbjct: 44  LCYWHYESFSDSVNDDIYKIAAAVELVILSFDIIDDLQDKDSDNSWSRTP--------EL 95

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           ++     +L  A + I   +T  +    +  +L           + GQ LD+ +   DE 
Sbjct: 96  SLNVALAMLIMASKTI--DETSFEHKRAAITILEEC----ALKSISGQQLDLLNNCRDED 149

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               +  +K+G+L   +C  G ++A       + +  +G+ +GII Q+ +D+
Sbjct: 150 SYIHMITLKSGSLTAMSCLIGEVLAKG--EVSKEVEAYGKYIGIIQQIKNDI 199


>gi|215480227|gb|ACJ67458.1| quorum sensing protein [Bacillus subtilis]
 gi|215480229|gb|ACJ67459.1| quorum sensing protein [Bacillus subtilis]
          Length = 272

 Score = 66.0 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +  A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++S    + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMSQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|6474941|dbj|BAA87333.1| comQ [Bacillus subtilis]
 gi|157418934|gb|ABV55172.1| quorum-sensing protein [Bacillus subtilis]
          Length = 286

 Score = 65.6 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|61744003|gb|AAX55632.1| geranyl diphosphate synthase [Ips pini]
          Length = 416

 Score = 65.6 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 84/252 (33%), Gaps = 28/252 (11%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND----RLLSAIRYALLGGKKIRSFLVTECA 62
            +++   K +D I  +++ Q     Q +       RL  AI Y +  GK+ +   +    
Sbjct: 63  EEMKAAMKYMDEIYPEVMGQIEKVPQYEEIKPILVRLREAIDYTVPYGKRFKGVHIVSHF 122

Query: 63  SLFNVNHLTALR--------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            L   +              +G   E I  Y  + DD+  MD+   RRGKPT +      
Sbjct: 123 KLL-ADPKFITPENVKLSGVLGWCAEIIQAYFCMLDDI--MDDSDTRRGKPTWYKLPGIG 179

Query: 115 -TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI- 172
             A+     +  + FE++     +         +L     + L  M  G      D    
Sbjct: 180 LNAVTDVCLMEMFTFELLKRYFPKHPSYADIHEILRNL--LFLTHMGQGYDFTFIDPVTR 237

Query: 173 -------DETQVFMIQKMK-TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQL 223
                   E     + + K   +      E  + MA+     + ++L      +G++ Q 
Sbjct: 238 KINFNDFTEENYTKLCRYKIIFSTFHNTLELTSAMANVYDPKKIKQLDPVLMRIGMMHQS 297

Query: 224 ADDLLDCEEDLP 235
            +D  D   D  
Sbjct: 298 QNDFKDLYRDQG 309


>gi|215480249|gb|ACJ67469.1| quorum sensing protein [Bacillus subtilis]
          Length = 263

 Score = 65.6 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|215480239|gb|ACJ67464.1| quorum sensing protein [Bacillus subtilis]
          Length = 259

 Score = 65.6 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|215480241|gb|ACJ67465.1| quorum sensing protein [Bacillus subtilis]
          Length = 265

 Score = 65.6 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLKDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|215480245|gb|ACJ67467.1| quorum sensing protein [Bacillus subtilis]
          Length = 260

 Score = 65.6 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|270011024|gb|EFA07472.1| farnesyl pyrophosphate synthase [Tribolium castaneum]
          Length = 243

 Score = 65.2 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 46/148 (31%), Gaps = 10/148 (6%)

Query: 100 IRRGKPTVHIQYDEVT-----AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
           +RRG P  + + D        AI+  +G+ T      S     +        +   T   
Sbjct: 1   MRRGMPCWYKKDDTGLNAFNDAILLEHGIYTLLKRHFSQHHCYVPTMELFHDVTLKTSMG 60

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA-LMCFACESGAIMAHA-SQNEKERLRC 212
                L  +      E     +   I K KT              MA+        + + 
Sbjct: 61  QALDCLCNKDGKPNLELFTMNKYNSIVKYKTAYYTFQLPVALAMYMANLYDPEMHRQAKT 120

Query: 213 FGENLGIIFQLADDLLDCEED---LPKK 237
               +G+ FQ+ DD LDC  D     KK
Sbjct: 121 ILMEMGLFFQIQDDFLDCFGDPEVTGKK 148


>gi|47776234|dbj|BAD20729.1| farnesyl pyrophosphate synthase [Candida glabrata]
          Length = 220

 Score = 65.2 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 81/217 (37%), Gaps = 26/217 (11%)

Query: 6   PSKLQENSKRIDTILDDLLLQTASH-MQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
            +  Q+      +++ +L +    + M  +  +   S++ Y   GGK  R   V +  ++
Sbjct: 4   EASRQKFVDEFPSLVQELRVVLEGYGMPKEAIEWYESSLNYNTPGGKLNRGLSVVDTYAI 63

Query: 65  FNV----------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD-E 113
                         +     +G  IE +  Y L+ DD+  MD    RRG+P  +   +  
Sbjct: 64  LKGYESVDDMKDDEYKKVALLGWCIELLQAYFLVADDM--MDKSITRRGQPCWYRVKNVN 121

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             AI     +L  A  ++   K   +++     +L L H++  Q  L GQ+LD+     D
Sbjct: 122 EIAINDA-FMLEAAIYVL--LKKHFRNDSYYVDLLELFHDVTFQTEL-GQLLDLITAPED 177

Query: 174 ETQV--------FMIQKMKTGALMCFACESGAIMAHA 202
              +          I   KT     +   + A+ A  
Sbjct: 178 HVDLSKFSLSKHSFIVIFKTAYYSFYLPVALAMYAAG 214


>gi|134077098|emb|CAK45439.1| unnamed protein product [Aspergillus niger]
          Length = 360

 Score = 65.2 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 59/177 (33%), Gaps = 10/177 (5%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K  R+ L+      + V   +   +      +H  SL+ DD+   D+  +RRGKP VH  
Sbjct: 47  KGFRNHLIDALQEWYKVPQASLAVISGVASLLHEASLMLDDIQ--DDSPLRRGKPAVHTI 104

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I +    +  A  +             + L+ S        G            
Sbjct: 105 FGVGQTINSARFHINNALRLCLQLSPS------ASLIFSDQIAQLFTGQAHDLQWARHKS 158

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              E   F +   K GAL+        +   A+QN    L  F   +G   QL DD 
Sbjct: 159 IPTEEDYFRMVDGKNGALLILISRL--MQNEATQNRTLDLTHFMNLIGRSHQLRDDY 213


>gi|56118821|ref|NP_001008170.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Xenopus
           (Silurana) tropicalis]
 gi|51950195|gb|AAH82488.1| MGC88978 protein [Xenopus (Silurana) tropicalis]
          Length = 389

 Score = 65.2 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 24/193 (12%)

Query: 53  IRSFLVTECASLFN---------------VNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +                           +    E IH   L+H  + +++ 
Sbjct: 101 MRGLVVLLISKAAGLSKSADHMFQPDLASGISARQRSLAEITELIHTAFLVHRGIVNINE 160

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +     N +   ++S      ++
Sbjct: 161 LKTCDG-PIKDMQFGNKMAILSGDFLLANACIGLADLQ-----NAKVVEIVSSAIGDMVK 214

Query: 158 GMLGGQMLDIQDEFIDETQV---FMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G+        ++ F D   +        +  G+L+  +C+S  ++AH       R   +G
Sbjct: 215 GVYYENSYMPENTFTDVNGISNWMENIFLSHGSLLAKSCQSAMLLAHHDSEISSRAFQYG 274

Query: 215 ENLGIIFQLADDL 227
           +++ I ++L+ DL
Sbjct: 275 KHMSISYKLSSDL 287


>gi|215480251|gb|ACJ67470.1| quorum sensing protein [Bacillus subtilis]
          Length = 272

 Score = 65.2 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|215480247|gb|ACJ67468.1| quorum sensing protein [Bacillus subtilis]
          Length = 263

 Score = 65.2 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLKDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|134075491|emb|CAK48052.1| unnamed protein product [Aspergillus niger]
          Length = 418

 Score = 65.2 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 75/223 (33%), Gaps = 25/223 (11%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYA-LLGGKK-----IRSFLVTECASLFNVNHLTA 72
           IL D+      +         L  + YA  + GKK     +R+  V       ++ ++  
Sbjct: 108 ILHDMSRFIEPYAGPPGESIALQPLEYAESVPGKKYWSEFLRAMNVWLRLPAQSIKYMDT 167

Query: 73  LRVGAAIECIH--CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
           +         H    S++ DD+   D   +RRG+P  HI Y E     +    +  A  +
Sbjct: 168 IFA-------HLCASSVMLDDIQ--DGSDLRRGQPATHILYGESQTTNSALYGIVKALSL 218

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
            +S         +   +L  + +  ++G                 +   +   KTG+   
Sbjct: 219 AASTDG------KHSQILLESLSDSIRGQALEVHWRYHARCPSNMEYINMVDCKTGSFFR 272

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            A     + A A       L      LG  FQ+ +D  +  +D
Sbjct: 273 CALRL--LEAEAGTKAIPELHHLVTLLGRYFQVYNDYRNLSDD 313


>gi|18307865|gb|AAL67724.1|AF456133_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 286

 Score = 65.2 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +  A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKHHPIVASYSYELGIISQIDNDY 188


>gi|215480253|gb|ACJ67471.1| quorum sensing protein [Bacillus subtilis]
          Length = 258

 Score = 64.8 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLKDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|119193350|ref|XP_001247281.1| hypothetical protein CIMG_01052 [Coccidioides immitis RS]
          Length = 499

 Score = 64.8 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 18/154 (11%)

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D   +RRG P  H+ Y     I +   +L  A E +   K +    +  +    
Sbjct: 251 DDIQ--DGSELRRGFPAAHVIYGSSQTINSSTYILVKAVERLQRLKNEECCVVFYEE--- 305

Query: 150 LTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
                  + +  GQ LD+                +   KTG+    A       A +S  
Sbjct: 306 ------SRNLCVGQGLDLYWRHHVQCPSVDDYITMVDNKTGSFFRLATRLMVAAAPSSFG 359

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEEDL--PKK 237
             E  +     +G  +Q+ DD  +   D    KK
Sbjct: 360 SAELFQLVSL-MGRYYQIRDDYQNLASDEYAAKK 392


>gi|215480231|gb|ACJ67460.1| quorum sensing protein [Bacillus subtilis]
          Length = 269

 Score = 64.8 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIISQIDNDY 188


>gi|157418930|gb|ABV55170.1| quorum-sensing protein [Bacillus subtilis]
          Length = 286

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIISQIDNDY 188


>gi|261499952|gb|ACX85229.1| transcriptional regulator [Bacillus subtilis]
          Length = 286

 Score = 64.8 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +  A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    +Q +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FTQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|215480255|gb|ACJ67472.1| quorum sensing protein [Bacillus subtilis]
          Length = 267

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALR-VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+  + A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIISQIDNDY 188


>gi|329767035|ref|ZP_08258563.1| hypothetical protein HMPREF0428_00260 [Gemella haemolysans M341]
 gi|328837760|gb|EGF87385.1| hypothetical protein HMPREF0428_00260 [Gemella haemolysans M341]
          Length = 113

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  +KTG L+    +   ++A  +  + E ++ FG+ LGI +Q+ DD+LD   D  K
Sbjct: 1   MHSLKTGRLIELPMDFACLVADKN-CDYEDVKEFGKQLGIAYQIKDDILDYYGDFEK 56


>gi|215480265|gb|ACJ67477.1| quorum sensing protein [Bacillus subtilis]
          Length = 269

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +  A IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIISQIDNDY 188


>gi|156378051|ref|XP_001630958.1| predicted protein [Nematostella vectensis]
 gi|156217989|gb|EDO38895.1| predicted protein [Nematostella vectensis]
          Length = 393

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 66/187 (35%), Gaps = 36/187 (19%)

Query: 54  RSFLVTECA----------------SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           R  LV   A                   +       ++    E IH   LIH+ +  +D 
Sbjct: 118 RGLLVLLVAKAAAPCLPSNKVSMEHEAVSGIFPGQRQIAEITEMIHTAYLIHNGV--VDL 175

Query: 98  GYIRRGKPTVHIQ---YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
             +    PT   +   +    +++ G+ LL  A   +++    L D     ++     + 
Sbjct: 176 AAV----PTKEFKDMEFGNKMSVLTGDFLLANACTGLAA----LNDTQVVAMI-----ST 222

Query: 155 GLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            +  ++ G+++  +   +       I      +L+  +C++   +   S   +E+   FG
Sbjct: 223 VISHLMEGRVMSSEYNTLTLDYWKEIVFKSKASLLANSCQAALKLLSHSTELQEKAYEFG 282

Query: 215 ENLGIIF 221
           +N+   F
Sbjct: 283 KNI--AF 287


>gi|79085124|gb|ABB51990.1| ComQ [Bacillus mojavensis]
          Length = 286

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +    IE +     I+DDL   DN      +  V ++ D   
Sbjct: 33  LALHHYLAFNGQDKKAIELLATGIELLILSFDIYDDLEDKDN------RNAVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQKILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 TCLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIIAQIENDY 188


>gi|14625010|dbj|BAB61885.1| geranylgeranyl diphosphate synthase [Rhodovulum strictum]
          Length = 131

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 29/43 (67%)

Query: 89  HDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           HDD+P MDN  +RRGKP +H  Y E  A++ G+ L+   FE++
Sbjct: 1   HDDMPCMDNADLRRGKPALHKAYGEPLALLTGDSLIVAGFEVL 43


>gi|167462439|ref|ZP_02327528.1| Pre-ComX modifying enzyme [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322383890|ref|ZP_08057630.1| isoprenyl transferase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151605|gb|EFX44685.1| isoprenyl transferase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 324

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 12/178 (6%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           +      +F  N+    R+GA  E +     I DDL   DN     GK  V +   E  A
Sbjct: 43  MTLYIHRMFGGNNPCLYRLGALAELLILGLDIMDDLQDKDNT----GK--VWMAMPEAAA 96

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQ 176
           +   NG+L  A   + + K +           +   +  +   + GQ +DI  +   E +
Sbjct: 97  MNVMNGMLMAALAELGNMKKEYAGQP---FPCASEVSRMITTAINGQHIDIMGKVQTEEE 153

Query: 177 VFMIQKMKTGALMCFACESGAIMAH---ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
              + + K+  L   +   G   A     S  E E+L+ F    G++ Q+ +D+ D  
Sbjct: 154 YVAMVQQKSCTLFRLSFYLGYSSAGPNLVSDLEAEQLQQFAVYAGMLGQIQNDIQDLT 211


>gi|215480279|gb|ACJ67484.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 64.0 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +  + IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIELLASGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIISQIDNDY 188


>gi|215480267|gb|ACJ67478.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +  + IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIELLASGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIISQIDNDY 188


>gi|256692943|gb|ACV13206.1| geranyldiphosphate synthase [Ips confusus]
          Length = 420

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 83/252 (32%), Gaps = 28/252 (11%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHND----RLLSAIRYALLGGKKIRSFLVTECA 62
            ++++  K +D I  +++ Q     Q +       RL  AI Y +  GK+ +   +    
Sbjct: 67  EEMKDAMKYMDEIYSEVMGQIEKVPQYEEVKPILVRLRDAIDYTVPYGKRFKGVHIVSHF 126

Query: 63  SLFNVNHLTALR--------VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            L   +              +G   E I  Y  + DD+  MD+   RRGKPT +      
Sbjct: 127 KLL-ADPKFITPENVKLSGVLGWCAEIIQAYFCMLDDI--MDDSDTRRGKPTWYKLPGIG 183

Query: 115 -TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI- 172
             A+     +  + FE++     Q         +      + L  M  G      D    
Sbjct: 184 LNAVTDVCLMEMFTFELLKRYFFQHPSCADIHEIFRNL--LFLTHMGQGCDFTFIDPVTR 241

Query: 173 -------DETQVFMIQKMK-TGALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQL 223
                   E     + + K   +      E  + MA+     + + L      +G++ Q 
Sbjct: 242 KINFKEFTEENYTKLCRYKIIFSTFHNTLELTSAMANVYDPKKIQELDPVLMRIGMMHQS 301

Query: 224 ADDLLDCEEDLP 235
            +D  D   D  
Sbjct: 302 QNDFKDLYRDQG 313


>gi|166835923|gb|ABY90133.1| geranyl-diphosphate synthase [Glycine max]
          Length = 283

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 21/173 (12%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L      L   +   A+   +A+      +  H+ L   D              Y   
Sbjct: 83  PALCLAACELVGGHRQQAMAAASALLLNLANAHAHEHL--TDGP-----------MYGPN 129

Query: 115 TAIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLMLSLTHNIGLQGMLGGQML--DIQDE 170
             ++ G+G++ + FE+++ P            ++M+ ++  +G  G+   Q +   + D 
Sbjct: 130 IELLTGDGIVPFGFELLARPDGPASASPERVLRVMIEISRAVGSVGLQDAQYVKKTLWDG 189

Query: 171 FIDETQVFMIQK----MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             +   V  +Q+     + G L      SGAI+   S+++ ERLR FG ++G+
Sbjct: 190 GEEVQNVESMQRFVLEKRDGGLHACGAASGAILGGGSEDQIERLRNFGFHVGM 242


>gi|2281328|gb|AAC45506.1| GerCC [Lactococcus lactis subsp. cremoris MG1363]
          Length = 92

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 41/91 (45%)

Query: 4  GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           L +   ++   ++  L  +     SH+  +++D   +       GGK +R   +   + 
Sbjct: 2  DLKNNFWKDYPALEKELAQVHQLMKSHVTIKNSDVKSAIFDIFDAGGKMLRPAYLLLFSG 61

Query: 64 LFNVNHLTALRVGAAIECIHCYSLIHDDLPS 94
            +++    L + A++E +H  +L+HDD+  
Sbjct: 62 FTDLSESERLALAASVEMMHTATLVHDDVID 92


>gi|255024193|ref|ZP_05296179.1| polyprenyl synthetase [Listeria monocytogenes FSL J1-208]
          Length = 151

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE-DLP 235
           T  L   +C SGA  + A++    +    G  LG+ FQ+ DD+LD    D  
Sbjct: 1   TXQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDVLDYTSTDEG 52


>gi|215480223|gb|ACJ67456.1| quorum sensing protein [Bacillus subtilis]
          Length = 264

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 17/172 (9%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +  + IE +     I+DDL   DNG        V ++ D   
Sbjct: 33  LALHHYLAFNGQDQKAIELLASGIELLILSFDIYDDLEDQDNGS------AVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQEILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               + K K+GAL    C  G ++A  +      +  +   LGII Q+ +D 
Sbjct: 139 ACLEMIKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIISQIDNDY 188


>gi|170044366|ref|XP_001849821.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167867553|gb|EDS30936.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 64

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
             L         ++    E IH  SL+HDD+  +D  + RRGKP+V++ ++   
Sbjct: 4   GRLVGNVVHAQRQIAMISEMIHTASLVHDDV--IDQSFARRGKPSVNVIWNHKK 55


>gi|317029196|ref|XP_001391030.2| hypothetical protein ANI_1_558054 [Aspergillus niger CBS 513.88]
          Length = 619

 Score = 63.3 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 5/151 (3%)

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKTQLKDNI 142
             S++ DD+   D   +RRG+P  HI Y E     +    +  A  + +S      +  +
Sbjct: 368 ASSVMLDDIQ--DGSDLRRGQPATHILYGESQTTNSALYGIVKALSLAASTDGKHSQILL 425

Query: 143 RSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHA 202
               +   + +  ++G                 +   +   KTG+    A     + A A
Sbjct: 426 GGDFVSEKSLSDSIRGQALEVHWRYHARCPSNMEYINMVDCKTGSFFRCALRL--LEAEA 483

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
                  L      LG  FQ+ +D  +  +D
Sbjct: 484 GTKAIPELHHLVTLLGRYFQVYNDYRNLSDD 514


>gi|73962111|ref|XP_547662.2| PREDICTED: similar to Farnesyl pyrophosphate synthetase (FPP
           synthetase) (FPS) (Farnesyl diphosphate synthetase)
           [Canis familiaris]
          Length = 262

 Score = 63.3 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 61/178 (34%), Gaps = 19/178 (10%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            +   N + AL VG  +E +  + L+ DD+  MD+   ++G+   + +          + 
Sbjct: 47  EVLEYNAVGALTVGWCMELLQAFFLVSDDI--MDSSLTQQGQICWYQKPGIGL-DAINDA 103

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------FIDET 175
           LL  A  I    K   ++      ++ L      Q  +G  +  I             E 
Sbjct: 104 LLLEA-CIYCLLKVYCQEQPYYLDLIELFLQSSYQTEIGQTLDLITSPQGSVDLSRFTEK 162

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           +   I K K  A         A        E    +    N+G  FQ+ DD LD   D
Sbjct: 163 RYKSIVKCK-MAFYSLYLPMAA-------KEHANAKKILLNMGEFFQIQDDFLDLFGD 212


>gi|297170553|gb|ADI21581.1| geranylgeranyl pyrophosphate synthase [uncultured verrucomicrobium
           HF0070_35E03]
          Length = 180

 Score = 62.9 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +       I + KTG L   ACE G  +A  S+    +   FG +LGII+Q+ DDL+D  
Sbjct: 1   MGLNDYLSIIQGKTGELFRAACEVGTHLAGFSKETTIQAGNFGSSLGIIYQIYDDLVDSF 60

Query: 232 ---EDLPK 236
               D+ K
Sbjct: 61  GNPGDINK 68


>gi|10119869|dbj|BAB13491.1| ComQ [Bacillus subtilis]
 gi|291485620|dbj|BAI86695.1| quorum-sensing protein [Bacillus subtilis subsp. natto BEST195]
          Length = 287

 Score = 62.9 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+  +  A+ +  + IE +   + I DD+   DN           ++ D   A  A   
Sbjct: 40  AFDGKNDKAIELLASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I S     K    +      +        L GQ +D+      E++   + K
Sbjct: 94  LYTLSLQVIGSVSNHPKLLSLTLQYSLQS--------LQGQHVDLNLTASSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSILGVYLA--TGEYNETVEEYSRYLGIVEQIAND 187


>gi|296198925|ref|XP_002747055.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1
           [Callithrix jacchus]
          Length = 400

 Score = 62.9 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 69/184 (37%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   A                 +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSGNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNINE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 224

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++++I +       K +T    GAL+  +C++   +A      +     +
Sbjct: 225 GVYHENSTSAKEDYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQY 284

Query: 214 GENL 217
           G+++
Sbjct: 285 GKHM 288


>gi|188501743|gb|ACD54840.1| farnesyl pyrophosphate syntethase [Olea europaea]
          Length = 186

 Score = 62.9 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 65/183 (35%), Gaps = 17/183 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L SK  E       +  +LL   A         R+   + Y + GGK  R   V +  
Sbjct: 2   SDLKSKFLEVYS---VLKSELLNDPAFEFTDDSRQRVERMLDYNVPGGKLNRGLSVVDSY 58

Query: 63  SLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            L              A  +G  IE +  Y L+ DD+  MD  + RRG+P          
Sbjct: 59  KLLKQGKELTAEETFLACSLGWCIEWLQAYFLVLDDI--MDKSHTRRGQPCWFRLPKVGM 116

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A+  G  L  ++  I+   K   K       ++ L + +       GQM+D+    + E
Sbjct: 117 IAVNDGILLRNHSSRIL---KNHFKGTPYYVDLVDLFNEVE-FQTAHGQMIDLITTLVGE 172

Query: 175 TQV 177
             +
Sbjct: 173 KDL 175


>gi|119573460|gb|EAW53075.1| farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase,
           dimethylallyltranstransferase, geranyltranstransferase),
           isoform CRA_a [Homo sapiens]
          Length = 248

 Score = 62.9 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 15/150 (10%)

Query: 95  MDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           MD+   RRG+   + +      AI   N L    + ++   K   ++      ++ L   
Sbjct: 1   MDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLL---KLYCREQPYYLNLIELFLQ 57

Query: 154 IGLQGMLGGQMLDIQDE--------FIDETQVFMIQKMKTG-ALMCFACESGAIMAHAS- 203
              Q  + GQ LD+              E +   I K KT          +   MA    
Sbjct: 58  SSYQTEI-GQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDG 116

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + E    +     +G  FQ+ DD LD   D
Sbjct: 117 EKEHANAKKILLEMGEFFQIQDDYLDLFGD 146


>gi|90903996|gb|ABE02389.1| hypothetical protein [Siniperca chuatsi]
          Length = 384

 Score = 62.5 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 8/162 (4%)

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                + +  + +   +    E IH   L+H  + ++    +  G P   +Q+    A++
Sbjct: 116 LLTQDMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTVSDG-PLKDMQFGNKMAVL 174

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDET 175
           +G+ LL  A   ++         + S  +  L   I  +         + D  D    E 
Sbjct: 175 SGDFLLANACTGLAQLNNTKVVELISSAIGDLVQGIYCENSSSTEENGLTDGVDVATWEE 234

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           Q F+      GAL+  +C++   +A   +  +     +G++L
Sbjct: 235 QAFLSH----GALLAKSCQAAMELAKHDKESQRLAYKYGKHL 272


>gi|330806139|ref|XP_003291031.1| hypothetical protein DICPUDRAFT_38391 [Dictyostelium purpureum]
 gi|325078828|gb|EGC32459.1| hypothetical protein DICPUDRAFT_38391 [Dictyostelium purpureum]
          Length = 366

 Score = 62.5 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 69/215 (32%), Gaps = 37/215 (17%)

Query: 49  GGKKIRSFLVTECASLFNV----NHLTAL---RVGAAIECIHCYSLIHDDLPSMDNGYIR 101
           GGK +R   V      F      +  T       G  IE +    LI DD+  MD G +R
Sbjct: 55  GGKYMRGLSVLNTIKDFKGVEQLDEETIFLGRVAGWCIEFLQASLLIADDI--MDGGIMR 112

Query: 102 RGKPTVHIQYD------EVTAIIAGNGLLTYAFEIISS----PKTQLKDNIRSQLMLSLT 151
           R +P  H   +             G   +  AF + S      K   ++      ML L 
Sbjct: 113 RDRPCWHHYPNPLIKNLNGVEQPIGKIAVNDAFIMESCIYILLKKYFREKPYYTEMLELF 172

Query: 152 HNIGLQGMLGGQMLDIQDEF--------IDETQVFMIQKMKTGALMCF-ACESGAIMAHA 202
           H I       GQ++D              +    F   + KT     +     G +M   
Sbjct: 173 HEI-SHNTFLGQLIDTSACHSLKGDFSSFNLKNFFHTVRFKTAYYSLYIPVALGMLMCGI 231

Query: 203 S--QNEKERLRCFGENLGI---IFQLADDLLDCEE 232
           +    + + ++     +G         DD LDC E
Sbjct: 232 NYLDPQYDAMKELLLEIGEYMNA---QDDYLDCYE 263


>gi|322786902|gb|EFZ13152.1| hypothetical protein SINV_08238 [Solenopsis invicta]
          Length = 353

 Score = 62.5 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 91/257 (35%), Gaps = 29/257 (11%)

Query: 1   MNGGL-PSKLQENSKRIDTILDDLLLQTASHMQ----TQHNDRLLSAIRYALLGGKKIRS 55
           M   L  + ++E ++ +  +  +++     H++       +  L   ++Y +   K +  
Sbjct: 1   MAFSLTQTWMEEETQNMRVVWSEIINDVTKHVRNLNVPDIDKWLEKVLQYNVSE-KNLHG 59

Query: 56  FLVTECASLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
            +V       + N          A  +   +E    Y +  DD+  +D    RRG+P  +
Sbjct: 60  LIVIYAYKSISPNEQQTENNIHLARILAWCMEMAIAYIVTLDDI--VDQSLFRRGQPCWY 117

Query: 109 IQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            + D    AI  G+ + +  + +I       +        L  T    +     GQ LD+
Sbjct: 118 RRNDTGLMAINDGSLVQSTVYYLIEKHFEGKE----CYNNLVKTFQQAIFKTQIGQFLDL 173

Query: 168 QDEF-------IDETQVFMIQKMKTGALMCFACESGAI-MAH-ASQNEKERLRCFGENLG 218
              F           +   I K KT   + F     A+  A        ++       LG
Sbjct: 174 TSTFKKCNLDQFTMERFNAIAKCKTEHGIYFLPTLLAMHFAEIKDPEMFKQAESILVQLG 233

Query: 219 IIFQLADDLLDCEEDLP 235
            ++Q+ DD LDC  DL 
Sbjct: 234 YLYQVQDDYLDCFGDLK 250


>gi|47220119|emb|CAF99032.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 373

 Score = 62.1 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 65/183 (35%), Gaps = 24/183 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   +                 +    E IH   L+H  +  +  
Sbjct: 85  MRGLIVLLLSKAAGASRSASGLPPQDMVSGIYPSQRNLAEITELIHTAFLVHRGIVDLKE 144

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +  G P   +Q+    A+++G+ LL  A   ++       DN +   ++S      +Q
Sbjct: 145 WTVSDG-PLKDMQFGNKMAVLSGDFLLANACTGLAQL-----DNTKVVELISSAIGDVVQ 198

Query: 158 GMLGGQMLDIQD---EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G+        ++   + ID         +  GAL+  +C++   +A      +     +G
Sbjct: 199 GLYYENCNGSENGVLQAIDMATWEEQAFLSHGALLAKSCQAALELARHDGQSQSLAYQYG 258

Query: 215 ENL 217
           ++L
Sbjct: 259 KHL 261


>gi|188501747|gb|ACD54842.1| farnesyl pyrophosphate syntethase [Olea europaea]
          Length = 181

 Score = 62.1 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 64/183 (34%), Gaps = 17/183 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L SK  E       +  +LL   A         R+   + Y + GGK  R   V +  
Sbjct: 2   SDLKSKFLEVYS---VLKSELLNDPAFEFTDDSRQRVERMLDYNVPGGKLNRGLSVVDSY 58

Query: 63  SLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            L              A  +G  IE +  Y L+ DD+  MD  + RRG+P          
Sbjct: 59  KLLKQGKELTAEETFLACSLGWCIEWLQAYFLVLDDI--MDKSHTRRGQPCWFRLPKVGM 116

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A+  G  L  +   I+   K   K       ++ L + +       GQM+D+    + E
Sbjct: 117 IAVNDGILLRNHISRIL---KNHFKGTPYYVDLVDLFNEVE-FQTAHGQMIDLITTLVGE 172

Query: 175 TQV 177
             +
Sbjct: 173 KDL 175


>gi|215480233|gb|ACJ67461.1| quorum sensing protein [Bacillus subtilis]
          Length = 268

 Score = 62.1 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+  +  A+ +  + IE +   + I DD+   DN           ++ D   A  A   
Sbjct: 40  AFDGKNDKAIELLASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I S     K    +      +        L GQ +D+      E++   + K
Sbjct: 94  LYTLSLQVIGSVSNHPKLLSLTLQYSLQS--------LQGQHVDLNLTASSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LG++ Q+A+D
Sbjct: 146 LKSGSLVTLPSILGVYLA--TGECNETVEEYSRYLGVVEQIAND 187


>gi|9230792|gb|AAF82172.1| ComQ [Bacillus subtilis]
 gi|79085096|gb|ABB51987.1| ComQ [Bacillus subtilis]
          Length = 286

 Score = 62.1 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 17/165 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            FN     A+ +  A IE +     I+DDL   DN         V ++ D   A+ A   
Sbjct: 40  AFNGQDKKAIELLAAGIELLILSFDIYDDLEDKDN------VNAVWMKIDSSIALNAVTA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + +++     + +    SQ +L+          + GQ  DI +    E     + K
Sbjct: 94  LYTLSIQVMCQASHEPE---FSQKILTFALQS-----IQGQHDDIVNAPKTEEACLEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            K+GAL    C  G ++A    +       +   LGI+ Q+ +D 
Sbjct: 146 NKSGALTALPCVMGVMLATGKYDPIVA--SYSYELGIMSQIDNDY 188


>gi|168703799|ref|ZP_02736076.1| geranyltranstransferase [Gemmata obscuriglobus UQM 2246]
          Length = 129

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 176 QVFMIQKMKTGALMCFACESGAIMA------HASQNEKERLRCFGENLGIIFQLADDLLD 229
           ++  I + KTGAL   +   G   A       A     +    + +  G+ FQ+ DDLLD
Sbjct: 3   RLEDIHRRKTGALFRSSLRLGVFAAQAERPAGACPEALKAADDYADAFGLAFQVTDDLLD 62

Query: 230 CEEDLPK 236
            E    K
Sbjct: 63  VESTADK 69


>gi|302675370|ref|XP_003027369.1| hypothetical protein SCHCODRAFT_86146 [Schizophyllum commune H4-8]
 gi|300101055|gb|EFI92466.1| hypothetical protein SCHCODRAFT_86146 [Schizophyllum commune H4-8]
          Length = 300

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 65/189 (34%), Gaps = 15/189 (7%)

Query: 50  GKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           GK IR  L+       N        V   +  +H  SL+ DD+   D+   RRG+P  HI
Sbjct: 12  GKDIRGRLIAGLNLWLNAPPDAVQAVAEVVAGLHAASLMLDDIE--DSSDTRRGQPAAHI 69

Query: 110 QYDEVTAIIAGNGLLTYAFEII------SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            Y     + AGN      +  +       + K    +++ ++ +LSL    GL  +    
Sbjct: 70  VYGIPQTMNAGNYACAKVYADVKKLYPFLTAKKPSLEDVLTEELLSLFRGQGLDILWRDT 129

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
                     E     +   K  A       +  + A  + N           +GI  Q+
Sbjct: 130 HRCP-----TEEGYVRMINGK--ASGLLRLAARLLSACGTTNTDRDYVPLMNLVGIFGQI 182

Query: 224 ADDLLDCEE 232
            DD ++   
Sbjct: 183 RDDFMNIYS 191


>gi|18307877|gb|AAL67733.1|AF456136_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 289

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+   +TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS      +    +      +        L GQ  D+      E++   + K
Sbjct: 94  LYTLSLQVISLVSNNPQHLSLTLQYSLQS--------LQGQHEDLNVTISSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEINETVEEYSRYLGIVEQIAND 187


>gi|326427259|gb|EGD72829.1| hypothetical protein PTSG_04558 [Salpingoeca sp. ATCC 50818]
          Length = 586

 Score = 62.1 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 47/256 (18%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTEC 61
            GL +  ++      T LD+LL           +  ++    Y     GK +RS  +   
Sbjct: 219 AGLLNTSKKTVPSFTTALDELL-----------DYHIVDPCLYVFDNPGKGVRSKSIKAL 267

Query: 62  ASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGN 121
           A  F ++      +  +++  H  SL+ DD+   D+  +RR +P  H+++     + +  
Sbjct: 268 ADNFQIHPHDLKSLMQSVDRFHELSLVIDDIE--DHSTLRRDRPCAHLKFGIPATLNSAY 325

Query: 122 GLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQ 181
            L     + +     +  +N    L+         QG+      +      DE     + 
Sbjct: 326 FLTFKLIDSVPRLFRRHHNNTIRLLIDGTVRAHRGQGLEIYWRDNQYCPTADE--YVEMV 383

Query: 182 KMKTGALMCFACESGAI----------MAHASQNE---------------------KERL 210
           K KT      +C+   +           A     +                     ++R+
Sbjct: 384 KGKTSTPFVLSCQLFFLHSTDWRVRLSSALVPPAQSICNMLGLSRFAREWLQPLHIEQRM 443

Query: 211 RCFGENLGIIFQLADD 226
               E++G+ FQ+ DD
Sbjct: 444 TALFEDVGVFFQVRDD 459


>gi|215480261|gb|ACJ67475.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 61.7 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+  +  A+ +  + IE +   + I DD+   DN           ++ D   A  A   
Sbjct: 40  AFDGKNDKAIELLASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I S     K       +LSLT    LQ +  GQ +D+      E++   + K
Sbjct: 94  LYTLSLQVIGSVSNHPK-------LLSLTLQYSLQSL-QGQHVDLNLTASSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LG++ Q+A+D
Sbjct: 146 LKSGSLVTLPSILGVYLA--TGECNETVEEYSRYLGVVEQIAND 187


>gi|296410710|ref|XP_002835078.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295627853|emb|CAZ79199.1| unnamed protein product [Tuber melanosporum]
          Length = 391

 Score = 61.7 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 65/252 (25%), Gaps = 72/252 (28%)

Query: 45  YALLGGKKIRSFLVTECASLFNVNHLTALR-------VGAAIECIHCYSLIHDDLPSMDN 97
           +  LGGK  R   V +   L       +L        +G   E +    L+ DD+  MD+
Sbjct: 43  HNTLGGKYNRGMTVPDTYRLLAGKETLSLAEYKLSAILGWCTELLQGMFLVADDI--MDS 100

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
              RRG P  ++          G+  +  +F                             
Sbjct: 101 SKTRRGSPCWYLMEG------VGSIAINDSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 154

Query: 158 GM---------------------LGGQMLDIQDEFIDETQVFMIQKMKT----------- 185
                                  +G +     D +ID  ++F     KT           
Sbjct: 155 XXXXXXXXXXXXXXXXXXXXXDKIGAKYFKGTDYYIDLVELFHDVTWKTELGQLVDLLTS 214

Query: 186 --------------------GALMCFACESGAIMAH-----ASQNEKERLRCFGENLGII 220
                                    ++      +A      A+ +   R R     LG  
Sbjct: 215 PEGSIDLNRFNYDKYYFIVRYKTAFYSFYLPVALAMHQAGIATPDNLTRARDVLIPLGEY 274

Query: 221 FQLADDLLDCEE 232
           FQ+ DD LDC  
Sbjct: 275 FQVQDDYLDCYG 286


>gi|161610601|gb|ABX75047.1| farnesyl diphosphate synthase [Polygala tenuifolia]
          Length = 252

 Score = 61.7 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 14/155 (9%)

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           + DD+  MD  + RRG+P           I   +G+L     I    K   +       +
Sbjct: 1   VLDDI--MDASHTRRGQPCWFRVPKVGM-IAVNDGILLRN-HIPRILKKHFRQKNYYVDL 56

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGAL-MCFACESGAI 198
           L L + +       GQM+D+      E  +          I + KT             +
Sbjct: 57  LDLFNEVE-FQTANGQMIDLITTLEGEKDLSKYSLSLHRRIVQYKTAYYSFYLPVACALL 115

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           MA+ + +    ++    ++G  FQ+ DD LDC  D
Sbjct: 116 MANENLDNHVDIKNILVDMGTYFQVQDDYLDCFGD 150


>gi|238492197|ref|XP_002377335.1| geranylgeranyl diphosphate synthase, putative [Aspergillus flavus
           NRRL3357]
 gi|220695829|gb|EED52171.1| geranylgeranyl diphosphate synthase, putative [Aspergillus flavus
           NRRL3357]
          Length = 444

 Score = 61.7 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 13/159 (8%)

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK--TQLKDNIRSQLM 147
           DD+   D+   RRG P  H+ Y     +   +     AF +    K     +  +  Q M
Sbjct: 190 DDIQ--DDSSKRRGMPAAHVMYGVGQTVNCVSYTGAKAFFLCEELKNANACRKALYGQYM 247

Query: 148 -LSLTHNIGLQGMLGGQMLDIQDEF----IDETQVFMIQKMKTGALMCFACESGAIMAHA 202
            L++     L  +  GQ L++  +F           ++   KT           A  A  
Sbjct: 248 PLTVISIDELDNLFSGQALELHWKFHRTCPSMNDYIIMIDNKTAGFFRLVLRMMAAEASV 307

Query: 203 SQNEKER--LRCFGENLGIIFQLADDLLDCEEDL--PKK 237
           S + +++  L  F   LG  +Q+ DD  +   D    KK
Sbjct: 308 SMSLEKKNTLLHFITLLGRYYQIRDDYQNLVSDEYAAKK 346


>gi|220675926|emb|CAX12085.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio]
 gi|220679659|emb|CAX12978.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio]
          Length = 370

 Score = 61.7 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 65/178 (36%), Gaps = 19/178 (10%)

Query: 53  IRSFLVTECASLFNVNHLTALR-------------VGAAIECIHCYSLIHDDLPSMDNGY 99
           +R  +V   +     +    +              +    E IH   L+H  + ++    
Sbjct: 88  MRGLVVLLMSKAAGPSSSDPIHDSMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWT 147

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
              G P   +Q+    A+++G+ LL  A   ++       ++ +   ++S      +QG+
Sbjct: 148 NSDG-PLKDMQFGNKMAVLSGDFLLANACTGLAQL-----NDTKVVELISSAIGDVVQGI 201

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                   +++ +          +  GAL+  +C++   +A  +   +     +G++L
Sbjct: 202 YHESSGSAEEDSLTVASWEDQAFLSHGALLAKSCQAAMKLARHNTEAQNLAFQYGKHL 259


>gi|238589678|ref|XP_002392090.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553]
 gi|215457662|gb|EEB93020.1| hypothetical protein MPER_08383 [Moniliophthora perniciosa FA553]
          Length = 153

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 183 MKTGALMCFACESGAIMAHASQNE--KERLRCFGENLGIIFQLADDLLDCEE 232
           MKT +LM     +   +   ++ E  +E    +G NLGI FQL DD+LD E 
Sbjct: 1   MKTASLMAKGARAATCLGGCTEGELYREIAYAYGRNLGIAFQLVDDVLDYEA 52


>gi|157779735|gb|ABV71395.1| geranyl diphosphate synthase [Phalaenopsis bellina]
          Length = 257

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 53/166 (31%), Gaps = 40/166 (24%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             L      L   N  +A+    AI  IH  +  H           R   P         
Sbjct: 82  PPLCLAATELVGGNPNSAINAACAIHLIHAVT--H----------TRTAPPLAEFSPG-- 127

Query: 115 TAIIAGNGLLTYAFEIIS-SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             ++ G+GLL  A+E+++ SP      ++R    ++ T         GG+          
Sbjct: 128 VLLMTGDGLLVLAYEMLARSPAVDADTSVRVLKEVARTAAAVAAAYEGGRE--------- 178

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
                       G L   A   G I+   ++ E ER    G  +G+
Sbjct: 179 ------------GELAAGAAACGVILGGGNEEEVER----GRRVGM 208


>gi|169829967|ref|YP_001700125.1| competence regulatory protein [Lysinibacillus sphaericus C3-41]
 gi|168994455|gb|ACA41995.1| Competence regulatory protein [Lysinibacillus sphaericus C3-41]
          Length = 287

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 16/168 (9%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
                ++L  +++ AAIE I     I DDL   DN         +    +   A+ A   
Sbjct: 42  EFAQDDNLEIIKIAAAIELIILSFDIIDDLQ--DNDS-----ECIWC-NEPAFAMNATLA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           ++  A ++IS            + +     N  +   + GQ LD+ +    E     +  
Sbjct: 94  MIFLAIKLISESSFT------HKQIAIGVLNDFVLRSINGQHLDLLNNCRVEESYIEMIT 147

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           +K+G+L   + + G ++A         +  +   +G+I Q+ +D+ D 
Sbjct: 148 LKSGSLTALSSQLGTVLALGKYEPC--VEEYSSYIGVIQQIKNDIEDL 193


>gi|50539770|ref|NP_001002351.1| decaprenyl-diphosphate synthase subunit 2 [Danio rerio]
 gi|49904368|gb|AAH75908.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Danio rerio]
          Length = 370

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 65/178 (36%), Gaps = 19/178 (10%)

Query: 53  IRSFLVTECASLFNVNHLTALR-------------VGAAIECIHCYSLIHDDLPSMDNGY 99
           +R  +V   +     +    +              +    E IH   L+H  + ++    
Sbjct: 88  MRGLVVLLMSKAAGPSSSDPIHDSMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWT 147

Query: 100 IRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGM 159
              G P   +Q+    A+++G+ LL  A   ++       ++ +   ++S      +QG+
Sbjct: 148 NSDG-PLKDMQFGNKMAVLSGDFLLANACTGLAQL-----NDTKVVELISSAIGDVVQGI 201

Query: 160 LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                   +++ +          +  GAL+  +C++   +A  +   +     +G++L
Sbjct: 202 YHESSGSAEEDSLTVASWEDQAFLSHGALLAKSCQAAMKLARHNTEAQNLAFQYGKHL 259


>gi|157418928|gb|ABV55169.1| quorum-sensing protein [Bacillus subtilis]
 gi|157418932|gb|ABV55171.1| quorum-sensing protein [Bacillus subtilis]
          Length = 287

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+  +  A+ +  + IE +   + I DD+   DN           ++ D   A  A   
Sbjct: 40  AFDGKNDKAIELLASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I S     K    +      +        L GQ +D+      E++   + K
Sbjct: 94  LYTLSLQVIGSVSNHPKLLSLTLQYSLQS--------LQGQHVDLNLTASSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LG++ Q+A+D
Sbjct: 146 LKSGSLVTLPSILGVYLA--TGECNETVEEYSRYLGVVEQIAND 187


>gi|39545738|emb|CAE03415.3| OSJNBa0071I13.16 [Oryza sativa Japonica Group]
          Length = 434

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 89/274 (32%), Gaps = 46/274 (16%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTEC 61
           + G+    +   +    + DDL+   +  +  +    L   I Y + GGK  R   V + 
Sbjct: 48  DHGIVDARERFVQAYGRLRDDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDS 107

Query: 62  ASLFNVNHLTALR---VGAAIEC---IH----CYSLIHDDLPSM----DNGYIRRGKPTV 107
             L             +   + C   +H        IH  +P        G +R   P+ 
Sbjct: 108 YLLLKQGSEVTEDDFFLACVLGCFKHVHYYLMTSWTIH--IPGEIRFAGTGDLRFFNPSS 165

Query: 108 H-----IQYDEVTA---------IIAG-----NGLLTYAFEIISSPKTQLKDNIRSQLML 148
           H     +     T          +  G     +G++     I+   K   ++      +L
Sbjct: 166 HDTLILLISCNKTGHLVLPPIFLLQVGLRGINDGIILKC-HILIMIKKYFREKPYFLDIL 224

Query: 149 SLTHNIGLQGMLGGQMLDIQDEFIDETQ--------VFMIQKMKTGAL-MCFACESGAIM 199
            +   I LQ  L GQMLD+                    I K KT          +  ++
Sbjct: 225 EIWSEIALQTSL-GQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLL 283

Query: 200 AHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + A   +   L+     +GI FQ+ DD LDC  D
Sbjct: 284 SGAKLEDFSGLKDILIEMGIYFQIQDDYLDCFAD 317


>gi|215480273|gb|ACJ67481.1| quorum sensing protein [Bacillus subtilis]
          Length = 258

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+  +  A+ +  + IE +   + I DD+   DN           ++ D   A  A   
Sbjct: 40  AFDGKNDKAIELLASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I S     K    +      +        L GQ +D+      E++   + K
Sbjct: 94  LYTLSLQVIGSVSNHPKLLSLTLQYSLQS--------LQGQHVDLNLTASSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LG++ Q+A+D
Sbjct: 146 LKSGSLVTLPSILGVYLA--TGECNETVEEYSRYLGVVEQIAND 187


>gi|18307881|gb|AAL67736.1|AF456137_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 289

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+   +TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS      +        LS+T    LQ +  GQ  D+      E++   + K
Sbjct: 94  LYTLSLQVISLVSNNPQH-------LSMTLQYSLQSL-QGQHEDLNVTISSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEINETVEEYSRYLGIVEQIAND 187


>gi|328793675|ref|XP_624298.3| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
          Length = 418

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 68/224 (30%), Gaps = 18/224 (8%)

Query: 24  LLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF-------NVNHLTALRVG 76
           L +  +   +  N      + Y +  G+K RS  +     L          N   A  + 
Sbjct: 92  LTEEDNEELSDINKWTTEILEYNVPKGEKWRSVSLIVAYKLLASQDQLTKENIRLARILA 151

Query: 77  AAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             IE +H   ++ +D+  +D+  +RR +PT H++     AI     + T   +++     
Sbjct: 152 WCIEIMHAVHIVMNDI--VDHADMRRNQPTWHVKVGLG-AINDALIMETCIQKLLEKHFK 208

Query: 137 QLKDNIRSQLMLSLTHNIGLQG------MLGGQMLDIQDEFIDETQVFMIQKMKTGAL-M 189
                +    +    +     G      +          +     +   + K K   L  
Sbjct: 209 LKNCYVELMNIFWKYNKKTGHGHRLDIFISTNWRKKANFDLFSMDRYNTLVKYKMSCLSF 268

Query: 190 CFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            F        A                 +G  +Q+ +D L+   
Sbjct: 269 IFPFSLAMRFAGVIDSEMHREAEKILLKIGHFYQVQNDFLNYYS 312


>gi|213028306|ref|ZP_03342753.1| geranyltranstransferase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 117

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 186 GALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
           GAL+  A   GA+ A    +N    L  + E++G+ FQ+ DD+LD   D   L K+
Sbjct: 1   GALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKR 56


>gi|226468292|emb|CAX69823.1| trans-hexaprenyltranstransferase [Schistosoma japonicum]
          Length = 176

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 177 VFMIQKMKTGALMCFACESGAIMA--HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                  KT +L+  +C++ A++     SQ   + +  FG++LG+ F L DD+LD   D 
Sbjct: 18  YLTKTYRKTASLIANSCKAVAMLTLPTLSQRHIDDMYDFGKHLGMAFSLIDDVLDFVTDE 77

Query: 235 PK 236
            K
Sbjct: 78  AK 79


>gi|215480263|gb|ACJ67476.1| quorum sensing protein [Bacillus subtilis]
          Length = 252

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+  +  A+ +  + IE +   + I DD+   DN           ++ D   A  A   
Sbjct: 40  AFDGKNDKAIELLASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I S     K    +      +        L GQ +D+      E++   + K
Sbjct: 94  LYTLSLQVIGSVSNHPKLLSLTLQYSLQS--------LQGQHVDLNLTASSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LG++ Q+A+D
Sbjct: 146 LKSGSLVTLPSILGVYLA--TGECNETVEEYSRYLGVVEQIAND 187


>gi|89894981|ref|YP_518468.1| hypothetical protein DSY2235 [Desulfitobacterium hafniense Y51]
 gi|219669383|ref|YP_002459818.1| hypothetical protein Dhaf_3364 [Desulfitobacterium hafniense DCB-2]
 gi|89334429|dbj|BAE84024.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539643|gb|ACL21382.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
          Length = 251

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 25/170 (14%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIH----DDLPSMDNGYIRRGKPTVHIQ 110
             +V   +  F     +A+ +    + I     +H    DD P ++    +R  P     
Sbjct: 47  PLIVLAVSQTFGGAARSAIGLATIFQYIFMADQVHRLMKDD-PDLEES--KRQFP----- 98

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
                 ++ G+ L    F  +   K        ++++ ++     ++ +        +D+
Sbjct: 99  ------VLVGDFLYGKFFLSLCKEKMLHFLAPLAKVIENMNQGAIIRWL-------SRDK 145

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
            + + +     +M+  +L   A   GA +A      +E+    G NLGI 
Sbjct: 146 KVSDGEYIRTIEMERASLTGLAARLGAELAGCPLKVQEQCETIGWNLGIA 195


>gi|73973963|ref|XP_539071.2| PREDICTED: similar to candidate tumor suppressor protein [Canis
           familiaris]
          Length = 400

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 89/238 (37%), Gaps = 34/238 (14%)

Query: 4   GLPSKLQENSKRIDTILDDLLLQTASHMQTQHN-----DRLLSAIRYALLGGKKIRSFLV 58
           G P+        +   L ++ LQ    + TQH        L+   R+ L    ++R  +V
Sbjct: 61  GYPTSFMSLRCLLSDELSNIALQVRKLVGTQHPLLTTASGLVHDSRHNL----QLRGLVV 116

Query: 59  TECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDNGYIRRG 103
              +     + + A                 +    E IH   L+H  + +++      G
Sbjct: 117 LLISKAAGPSSMNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDG 176

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
            P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +QG+    
Sbjct: 177 -PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQGVYHEN 230

Query: 164 MLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCFGENL 217
               ++  I E       K +T    GAL+  +C++   +A    + ++    +G+++
Sbjct: 231 STSAKENHITEDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQYGKHM 288


>gi|301763920|ref|XP_002917381.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like
           [Ailuropoda melanoleuca]
          Length = 398

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 69/184 (37%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 109 LRGLVVLLISKAAGPSSMNTSCQKYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 168

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 169 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 222

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I E       K +T    GAL+  +C++   +A    + ++    +
Sbjct: 223 GVYHENSTSAKENHITEDIGISAWKKQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQY 282

Query: 214 GENL 217
           G+++
Sbjct: 283 GKHM 286


>gi|302544313|ref|ZP_07296655.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302461931|gb|EFL25024.1| trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase)
           [Streptomyces himastatinicus ATCC 53653]
          Length = 266

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 29/186 (15%)

Query: 39  LLSAIRY-ALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +  A R+ A  GG+++R  LV   A   + +    +     +E  H  +  HDD+     
Sbjct: 35  ISEAARHLARPGGRRLRPLLVLLAARFGDPDAPGVVPAAVVVELTHLATRYHDDV----- 89

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                       +     A++ G+ L   A  +++    +                   +
Sbjct: 90  ----------RHEAKPSVAVLIGDFLFARASRLLAGLGPRAV----------RLQADAFK 129

Query: 158 GMLGGQMLD---IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            ++ GQ+L+    +D              +TGAL   +   GA+ + A++   + L  +G
Sbjct: 130 RLVSGQILETTGPRDGHDPVAHHLRTLAARTGALTAVSGRLGAVTSGATEEIADTLAVYG 189

Query: 215 ENLGII 220
           E LG+ 
Sbjct: 190 ERLGVA 195


>gi|215480271|gb|ACJ67480.1| quorum sensing protein [Bacillus subtilis]
          Length = 241

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+  +  A+ +  + IE +   + I DD+   DN           ++ D   A  A   
Sbjct: 40  AFDGKNDKAIELLASGIELLILSADIFDDIEDKDN------LQASWMKLDPSIATNAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++I S     K    +      +        L GQ +D+      E++   + K
Sbjct: 94  LYTLSLQVIGSVSNHPKLLSLTLQYSLQS--------LQGQHVDLNLTASSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LG++ Q+A+D
Sbjct: 146 LKSGSLVTLPSILGVYLA--TGECNETVEEYSRYLGVVEQIAND 187


>gi|254411920|ref|ZP_05025696.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
           7420]
 gi|196181642|gb|EDX76630.1| polyprenyl synthetase superfamily [Microcoleus chthonoplastes PCC
           7420]
          Length = 318

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 10/173 (5%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           + L        +     A+ V AA+  +     I DDL   D          +  +    
Sbjct: 42  AILPLASCQAVDGEAKEAIHVCAALLALGLCLRILDDLEDQDRDGQ------LWKEVGAT 95

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A    + +   +FEI+S  K  L+  I  ++  S         +  GQ  ++       
Sbjct: 96  RAWNYASAIHILSFEILS--KASLEPKIFHKINQSYIDA--FFRISVGQDRELVGTTRTV 151

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
              ++  +MK+   +  AC +GA++   +    +    FG +LG+  Q+ +D+
Sbjct: 152 EDYWLTVEMKSAGFVATACATGAMVGTDNPELIQSCGVFGHHLGLALQILNDM 204


>gi|167630013|ref|YP_001680512.1| farnesyltranstransferase, putative [Heliobacterium modesticaldum
           Ice1]
 gi|167592753|gb|ABZ84501.1| farnesyltranstransferase, putative [Heliobacterium modesticaldum
           Ice1]
          Length = 273

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 12/169 (7%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K   + LV   A +F    L    + +A++ I   + IH  +P  D G + R       +
Sbjct: 44  KLFPAILVLLTARMFGTPSLKTNCLASAVQFIQTGTDIHRTIP--DEGRVLRHLE----K 97

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
                +++ G+        ++   +        S+ +  +     L+  L      ++  
Sbjct: 98  ATIPFSVLVGDLYYCQFLSLLCEGELLEYLTPISRTVCRVHEGGVLRKEL------VEPG 151

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           F  +  +  +++M+  +L   AC     +  AS  +   L   G  +G+
Sbjct: 152 FATDEHIRAMREMEFASLPLLACRVAGEICGASPRQVVALEQLGRAVGL 200


>gi|219849930|ref|YP_002464363.1| polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
 gi|219544189|gb|ACL25927.1| Polyprenyl synthetase [Chloroflexus aggregans DSM 9485]
          Length = 305

 Score = 60.6 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 15/184 (8%)

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
           ++R+ LV   A L            AA+E I   +  H++L  +D    R G+   +  +
Sbjct: 45  RLRALLVLAVARLGGATGEHVAHAAAAVELIEAATRAHNNL--IDEQARRLGR-VKNGAW 101

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
           D   A++ G+ L   A   ++     L  + R   + S      +  +  GQ+  + +  
Sbjct: 102 DHGVALMVGDYLFALASGEMA-----LSPDPRIIGLYSHA----VMQICEGQLTTVTNLI 152

Query: 172 IDETQVFMIQKMKTGALMCFACESGA---IMAHASQNEKERLRCFGENLGIIFQLADDLL 228
             ET +    +            +     + ++            G++LG+  QLA ++ 
Sbjct: 153 PHETALATYWQRAEALAGALPAAAAQAGILCSNLPDTFLAPAARLGKHLGLARQLAAEIR 212

Query: 229 DCEE 232
           D E 
Sbjct: 213 DLES 216


>gi|291396719|ref|XP_002714927.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 2-like
           [Oryctolagus cuniculus]
          Length = 405

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 68/184 (36%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + ++  
Sbjct: 116 LRGLVVLLISKAAGPSSVDVSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLSE 175

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 176 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 229

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I E       K +T    GAL+  +C++   +A      +E+   +
Sbjct: 230 GVYHENSTSTKENCITEDIGISAWKEQTFLSHGALLAKSCQAAMELAKHGTEVQEKAFQY 289

Query: 214 GENL 217
           G+++
Sbjct: 290 GKHM 293


>gi|18307857|gb|AAL67718.1|AF456131_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
           168]
 gi|18307885|gb|AAL67739.1|AF456138_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|79085172|gb|ABB51993.1| ComQ [Bacillus subtilis]
          Length = 279

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 20/179 (11%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L        L +   IE +     I DDL   DN  I+       ++ D   A+ A   
Sbjct: 40  ALSGNRSSHILTLAGGIELLILAFDIFDDLEDEDNIEIK------WMKIDPSLALNAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T   E I S     + +  +               + GQ  D+++    E +   + K
Sbjct: 94  LYTLGLETICSISNSAEFHRLTLKYALNA--------MQGQHEDLRNSPETEEECIQMMK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--L--DCEEDLPKK 237
            K G+L   +    A++A+      + +  +   +GII QL +D   L  D   D+ KK
Sbjct: 146 QKAGSLTAMSAVLAAMLANG--EFNQTIEDYAYKIGIIKQLENDYYGLVNDQRSDIRKK 202


>gi|149636134|ref|XP_001511694.1| PREDICTED: similar to subunit 2 of solanesyl diphosphate synthase
           [Ornithorhynchus anatinus]
          Length = 390

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTALRV---------------GAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +    L +                   E IH   L+H  + ++  
Sbjct: 101 MRGLVVLLVSKAAGPSGPATLALDHGMVSGIYPSQRSLAEITELIHTAFLVHRGIVNLGE 160

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +     N +   ++S   +  +Q
Sbjct: 161 LKTSDG-PLKDMQFGNKIAILSGDFLLANACTSLAQLQ-----NTKVVELISSALSDLVQ 214

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTG----ALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++ +I +       K +T     AL+  +C++   +A      +E    +
Sbjct: 215 GIYHENSSSAEENWITDDIGISAWKKQTFLSHSALLAKSCQAAMELARHGATVQEVAFQY 274

Query: 214 GENL 217
           G+++
Sbjct: 275 GKHM 278


>gi|258574603|ref|XP_002541483.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237901749|gb|EEP76150.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 290

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 8/142 (5%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           SL+ DD+   D+  +RRG P  H+ Y     I +    L    + +   + +   +I  +
Sbjct: 41  SLMLDDVQ--DDSELRRGSPAAHVVYGRSQTINSAIYSLMKVADRLGQLQDEKCRDIFYE 98

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
              +L    GL  +   Q +          +   +   KTG+                 N
Sbjct: 99  ESRNLCVGQGLD-LHWRQHVQCP----SIQEYITMVDNKTGSFFRLVTRLVVAETAEPPN 153

Query: 206 EKERLRCFGENLGIIFQLADDL 227
               L  F   LG  +Q+ DD 
Sbjct: 154 SV-NLFQFITLLGRYYQIRDDY 174


>gi|299538243|ref|ZP_07051528.1| transcriptional regulator of comG and srfA [Lysinibacillus
           fusiformis ZC1]
 gi|298726445|gb|EFI67035.1| transcriptional regulator of comG and srfA [Lysinibacillus
           fusiformis ZC1]
          Length = 300

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 21/174 (12%)

Query: 57  LVTECASLFNVN-HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           +       F+ + +    +V AAIE +     I DDL   D+ Y      + +       
Sbjct: 47  MCFWHYEAFSSSINQDIYKVAAAIELLILSFDIIDDLQDKDSDY------SWNKTP--EL 98

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           ++     +L  A + I     + K     +L+            + GQ LD+ +   DE 
Sbjct: 99  SLNVALAMLIMASKTIDETSFEHK-RAAIKLVNEYALKS-----INGQQLDLLNSCRDED 152

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDL 227
               +  +K+G+L    C  G ++A    SQ  +E    +G+ +GII Q+ +D+
Sbjct: 153 SYVKMITLKSGSLTAMGCLVGEVLAKGVISQEVEE----YGKYIGIIQQIKNDI 202


>gi|18307861|gb|AAL67721.1|AF456132_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 279

 Score = 60.2 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 20/179 (11%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L   +    L +   IE +     I DDL   DN  I+       ++ D   A+ A   
Sbjct: 40  ALSGNSSSHILTLAGGIELLILAFDIFDDLEDEDNIEIK------WMKIDPSLALNAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T   E I S     + +  +               + GQ  D+++    E +   + K
Sbjct: 94  LYTLGLETICSISNSAEFHRLTFKYALNA--------MQGQHEDLRNSPETEEECIQMMK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--L--DCEEDLPKK 237
            K G+L   +    A++A+      + +  +   +GII QL +D   L  D   D+ KK
Sbjct: 146 QKAGSLTAMSAVLAAMLANG--EFNQTIEDYAYKIGIIKQLENDYYGLVNDQRSDIRKK 202


>gi|264681462|ref|NP_001161125.1| decaprenyl-diphosphate synthase subunit 2 [Sus scrofa]
 gi|262204918|dbj|BAI48039.1| prenyl (decaprenyl) diphosphate synthase subunit 2 [Sus scrofa]
          Length = 394

 Score = 60.2 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 69/184 (37%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + + A                 +    E IH   L+H  + +++ 
Sbjct: 105 LRGLVVLLISKAAGPSSVNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 164

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 165 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 218

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I +       K +T    GAL+  +C++   +A      ++    +
Sbjct: 219 GVYHENSTSAKENRITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQY 278

Query: 214 GENL 217
           G+++
Sbjct: 279 GKHM 282


>gi|322696478|gb|EFY88270.1| farnesyl pyrophosphate synthetase 1 [Metarhizium acridum CQMa 102]
          Length = 248

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 12/147 (8%)

Query: 95  MDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           MD+   RRG+P  H Q      AI     L +  F ++   KT  + +     M+ L  +
Sbjct: 1   MDDSTTRRGQPCWHRQPQIGLMAINDACILKSTIFFLL---KTFFRQHPAYINMVDLFVD 57

Query: 154 IGLQGMLGGQMLDIQD------EFIDETQVFMIQKMKTGALMCFACESGA-IMAHASQNE 206
            GL   L GQ+ D+        E     Q + I K K+   +             A+   
Sbjct: 58  NGLHTEL-GQLSDLAAAKEPDIEKFTMEQYWAIVKDKSSYSISGPVTLALEYWQLATPKN 116

Query: 207 KERLRCFGENLGIIFQLADDLLDCEED 233
            ++ R F   LG  FQ+ DD +D   D
Sbjct: 117 LQQTRDFSVALGEYFQVNDDYVDVFGD 143


>gi|149723076|ref|XP_001504011.1| PREDICTED: prenyl (decaprenyl) diphosphate synthase, subunit 2
           [Equus caballus]
          Length = 400

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + + A                 +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSMKASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 224

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++ +I +       K +T    GAL+  +C++   +A      ++    +
Sbjct: 225 GVYHENSTSAKENYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHGAEVQDMAFQY 284

Query: 214 GENL 217
           G+++
Sbjct: 285 GKHM 288


>gi|221110878|ref|XP_002156194.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
           subunit 2 [Hydra magnipapillata]
          Length = 376

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 11/168 (6%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---YDEVTAIIA 119
              N  HL    +    E I+   L+H  + ++D         T+  +   +    +++ 
Sbjct: 117 EFVNGIHLKQRILAETCEMINIAFLVHGCIINLDKLQY---LETLSKKSLEFGNKLSVLG 173

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  A   ++         + SQ +        L      Q+       + E +V  
Sbjct: 174 GDFLLAKASVELAKLSNTYVVELISQAIGDSAEGNVLDDFCAEQICKW---SVKEWEVHT 230

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            Q    G+L+  +C+S  ++    +   +    FG  L +  Q A+D+
Sbjct: 231 FQT--RGSLLANSCKSALVLVGHQEQHMDAAFEFGRYLSVAVQCAEDV 276


>gi|221108268|ref|XP_002165073.1| PREDICTED: similar to prenyl (decaprenyl) diphosphate synthase,
           subunit 2 [Hydra magnipapillata]
          Length = 376

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 11/168 (6%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ---YDEVTAIIA 119
              N  HL    +    E I+   L+H  + ++D         T+  +   +    +++ 
Sbjct: 117 EFVNGIHLKQRILAETCEMINIAFLVHGCIINLDKLQY---LETLSKKSLEFGNKLSVLG 173

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+ LL  A   ++         + SQ +        L      Q+       + E +V  
Sbjct: 174 GDFLLAKASVELAKLSNTYVVELISQAIGDSAEGNVLDDFCAEQICKW---SVKEWEVHT 230

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            Q    G+L+  +C+S  ++    +   +    FG  L +  Q A+D+
Sbjct: 231 FQT--RGSLLANSCKSALVLVGHQEQHMDAAFEFGRYLSVAVQCAEDV 276


>gi|309792674|ref|ZP_07687127.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
 gi|308225302|gb|EFO79077.1| polyprenyl synthetase [Oscillochloris trichoides DG6]
          Length = 304

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 82/217 (37%), Gaps = 18/217 (8%)

Query: 5   LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLL-SAIRYALLGGKKIRSFLVTECAS 63
           LP+ + ++ + +D I+ +     +  +       L   A+        + R+ LV   A 
Sbjct: 6   LPATITDDLQAVDRIVRERTASRSGVIGVAEPTILRPDAM--------RPRAALVLLAAH 57

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           L        +   AA+E I+  +  H+DL  +D    RRG+      +    +++ G+ L
Sbjct: 58  LGEYQLERTIHAAAAVELIYAATRTHNDL--IDAAERRRGQ-ARQGDWGHGLSLMVGDYL 114

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
              A   ++        +  SQ ++ +  +          +  ++   + +   F     
Sbjct: 115 FALAAGEMALSPDPRVISSYSQAVMRICESELAP------IPGLRPLEVAQAAYFAHTGS 168

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
              AL   AC++GA     + ++   L  +G  LG+ 
Sbjct: 169 SAAALYAAACQAGAACGGLAGDQVAALAQYGHELGVA 205


>gi|322796022|gb|EFZ18646.1| hypothetical protein SINV_13860 [Solenopsis invicta]
          Length = 77

 Score = 59.4 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
           +        + NV   T  ++    E IH  SL+HDD+  +D   IRRGKP+V++ + + 
Sbjct: 19  AIWTLLSKIMKNVLLQTQRQIAMIAEMIHSASLLHDDV--IDQSDIRRGKPSVNVMWSQK 76


>gi|154152177|ref|NP_001093855.1| decaprenyl-diphosphate synthase subunit 2 [Bos taurus]
 gi|151554491|gb|AAI50064.1| PDSS2 protein [Bos taurus]
 gi|296484143|gb|DAA26258.1| prenyl diphosphate synthase, subunit 2 [Bos taurus]
          Length = 395

 Score = 59.4 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     N + A                 +    E IH   L+H  + +++ 
Sbjct: 106 LRGLVVLLISKAAGPNSVNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 165

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 166 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 219

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I +       K +T    GAL+  +C++   +A      ++    +
Sbjct: 220 GVYYENSTLAKENRITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQY 279

Query: 214 GENL 217
           G+++
Sbjct: 280 GKHM 283


>gi|114384160|gb|ABI73983.1| farnesyl pyrophosphate synthase [Musa acuminata AAA Group]
          Length = 184

 Score = 59.4 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 59/184 (32%), Gaps = 29/184 (15%)

Query: 47  LLGGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGY 99
           + GGK  R   V +   L        +        +G  IE +  Y L+ DD+  MDN +
Sbjct: 1   VPGGKLNRGLSVIDSYKLLKEGNQLNDEEVFLGCALGWCIEWLQAYFLVLDDI--MDNSH 58

Query: 100 IRRGKPTVHIQYDEV-TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
            RRG+            A+  G  L  +   I+   K   K       +L L + +    
Sbjct: 59  TRRGQLCWFRVPKVGLIAVNDGILLRNHIPRIL---KRHFKGKPYYVDLLDLFNEVE-FQ 114

Query: 159 MLGGQMLDIQDEFIDETQ--------VFMIQKMKTGAL-MCFACESGAIMAHASQNEKER 209
              GQMLD+      E             I + KT             +MA       E 
Sbjct: 115 TASGQMLDLITTHEGEKDLSKYTLPVYNRIVQYKTAYYSFYLPVACALLMAG------EN 168

Query: 210 LRCF 213
           L  F
Sbjct: 169 LDTF 172


>gi|281350998|gb|EFB26582.1| hypothetical protein PANDA_005594 [Ailuropoda melanoleuca]
          Length = 302

 Score = 59.0 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 69/184 (37%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 13  LRGLVVLLISKAAGPSSMNTSCQKYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 72

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 73  LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 126

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I E       K +T    GAL+  +C++   +A    + ++    +
Sbjct: 127 GVYHENSTSAKENHITEDIGISAWKKQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQY 186

Query: 214 GENL 217
           G+++
Sbjct: 187 GKHM 190


>gi|169831248|ref|YP_001717230.1| hypothetical protein Daud_1086 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638092|gb|ACA59598.1| hypothetical protein Daud_1086 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 249

 Score = 59.0 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +R  +V     LFN      + + A ++ +     +H     +D G    G P       
Sbjct: 47  LRPAVVLLTGRLFNCVRAKLVALAAMVQLLFLSVRVH---QQVDEG----GGPGNDRT-- 97

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
              A++ G+  L   F ++ S          S+ +  +      +  L            
Sbjct: 98  -RLAVLIGDYYLGRFFGLVGSSGLTGVLLPLSEAVCRIHDGAIARIHLCA---------- 146

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLAD 225
               V    + +T  L+  AC    +   A +  +E L  +G NLG+ + L D
Sbjct: 147 TPALVMDAVRQETAELIAQACVIAGLEGDAPEGAREELFRYGYNLGMGYGLTD 199


>gi|215480217|gb|ACJ67453.1| quorum sensing protein [Bacillus subtilis]
          Length = 268

 Score = 58.6 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+   +TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS         + S  +     +      L GQ  D+  +   E++   + K
Sbjct: 94  LYTLSLQVISLVSNN--PQLLSLTLQYSLQS------LQGQHADLNVKISSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEINETVEEYSLYLGIVEQIAND 187


>gi|145611940|ref|XP_369218.2| hypothetical protein MGG_00026 [Magnaporthe oryzae 70-15]
 gi|145616406|ref|XP_001403072.1| hypothetical protein MGG_14382 [Magnaporthe oryzae 70-15]
 gi|145010176|gb|EDJ94832.1| hypothetical protein MGG_14382 [Magnaporthe oryzae 70-15]
 gi|145019146|gb|EDK03425.1| hypothetical protein MGG_00026 [Magnaporthe oryzae 70-15]
          Length = 372

 Score = 58.6 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 72/232 (31%), Gaps = 57/232 (24%)

Query: 2   NGGL-PSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRY-ALLGGKKIRSFLVT 59
           NG L  +K+ +  + ++ I+         H+    ++ + +   Y + L  K +R+ L+ 
Sbjct: 78  NGALHDAKVNDTKEELNRII------LNVHLPPAPSEAIEAPFNYISSLKSKGVRNLLIM 131

Query: 60  ECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
              +L                         DD+   DN  +RR  P  H  +        
Sbjct: 132 ALNTL-------------------------DDVQ--DNSPLRRSNPATHTVFGMP----- 159

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF----IDET 175
                        +  + +   +      S   N      + GQ LD+   F        
Sbjct: 160 ------------QTVNSSVYATVDLIHRASEQGNAQAAQEVVGQSLDLLWTFEVSTPTFE 207

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           +   +   KTGAL          ++   Q     L  F   LG  FQ+ DD 
Sbjct: 208 EYMQMVDGKTGALFVMIYRIMVAVS-PGQTVLPALERFTLLLGRYFQIRDDY 258


>gi|215480281|gb|ACJ67485.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 58.6 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+   +TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS         + S  +     +      L GQ  D+  +   E++   + K
Sbjct: 94  LYTLSLQVISLVSNN--PQLLSLTLQYSLQS------LQGQHADLNVKISSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEINETVEEYSLYLGIVEQIAND 187


>gi|215480257|gb|ACJ67473.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 58.6 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+   +TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS         + S  +     +      L GQ  D+  +   E++   + K
Sbjct: 94  LYTLSLQVISLVSNN--PQLLSLTLQYSLQS------LQGQHADLNVKISSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEINETVEEYSLYLGIVEQIAND 187


>gi|325118365|emb|CBZ53916.1| hypothetical protein NCLIV_036980 [Neospora caninum Liverpool]
          Length = 465

 Score = 58.6 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 22/56 (39%)

Query: 177 VFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                  KT +L+  +C   AI+             FG  +G+ FQL DD LD   
Sbjct: 281 YLTKTYHKTASLIAESCACLAILMGLPSRWVSWSADFGACVGMAFQLYDDELDFTA 336


>gi|215480219|gb|ACJ67454.1| quorum sensing protein [Bacillus subtilis]
          Length = 270

 Score = 58.6 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+   +TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS         + S  +     +      L GQ  D+  +   E++   + K
Sbjct: 94  LYTLSLQVISLVSNN--PQLLSLTLQYSLQS------LQGQHADLNVKISSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEINETVEEYSLYLGIVEQIAND 187


>gi|260789526|ref|XP_002589797.1| hypothetical protein BRAFLDRAFT_115262 [Branchiostoma floridae]
 gi|229274980|gb|EEN45808.1| hypothetical protein BRAFLDRAFT_115262 [Branchiostoma floridae]
          Length = 371

 Score = 58.6 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 62/160 (38%), Gaps = 7/160 (4%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
           + +  + +   +    E IH   L+H    +L  + +     G  +    +    A+++G
Sbjct: 108 MVSGIYRSQRSLAEITEMIHTAYLMHRGVVNLEEVTSADGTVGDMS----FGNKMAVLSG 163

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMI 180
           + LL  A   ++  +      I S  +  +     L       +  + D+          
Sbjct: 164 DFLLANACTGLAQLRNTKVVEIVSSAIADMMEGSFLLEQDNQGVTFLPDKDWTIKDWTNH 223

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             + +G+L+  +C++  ++A    + +++   +G+++ + 
Sbjct: 224 SFLCSGSLIAKSCQAAMMLAGHRLDIQKKAYNYGKHMALA 263


>gi|213404660|ref|XP_002173102.1| decaprenyl-diphosphate synthase subunit 2 [Schizosaccharomyces
           japonicus yFS275]
 gi|212001149|gb|EEB06809.1| decaprenyl-diphosphate synthase subunit 2 [Schizosaccharomyces
           japonicus yFS275]
          Length = 286

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 37/182 (20%)

Query: 55  SFLVTECASLFNVN-------HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
             LV   +    ++       +    ++    E IH  + IH                +V
Sbjct: 84  PLLVLLMSRASTLDATPSKQQYQRYKQLSRITELIHAANAIH---------------KSV 128

Query: 108 HIQYDEVTAI-----IAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
                E  +I     + G+ LL  A   ++S    LKDN  ++LM        +  ++ G
Sbjct: 129 QEHAKEAHSITKLKVLVGDYLLGKASVDLAS----LKDNSITELM-----ASAIANLIEG 179

Query: 163 QMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
                +D    E++   + ++++  L   AC   +I+  AS++  +    +G +LG   Q
Sbjct: 180 NFPQTRDTMSIESERRRL-RLQSAFLPAKACLCASILNRASEHISQACFEYGLHLGTAMQ 238

Query: 223 LA 224
           L 
Sbjct: 239 LR 240


>gi|188501745|gb|ACD54841.1| farnesyl pyrophosphate syntethase [Olea europaea]
          Length = 186

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 64/183 (34%), Gaps = 17/183 (9%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECA 62
             L SK  E       +  +LL   A         R+   + Y + GGK  R   V +  
Sbjct: 2   SDLKSKFLEVYS---VLKSELLNDPAFEFTDDSRQRVERMLDYNVPGGKLNRGLSVVDSY 58

Query: 63  SLFNVNHL-------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV- 114
            L              A  +G  I+ +  Y L+ DD+  MD  + RRG+P          
Sbjct: 59  KLLKQGEELTAEETFLACSLGWCIKWLQAYFLVLDDI--MDKSHTRRGQPCWFRLPKVGM 116

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            A+  G  L  +   I+   K   K       ++ L + +       GQM+D+    + E
Sbjct: 117 IAVNDGILLRNHISRIL---KNHFKGTPYYVDLVDLFNEVE-FQTAHGQMIDLITTLVGE 172

Query: 175 TQV 177
             +
Sbjct: 173 KDL 175


>gi|215480215|gb|ACJ67452.1| quorum sensing protein [Bacillus subtilis]
          Length = 265

 Score = 58.2 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+   +TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS         + S  +     +      L GQ  D+  +   E++   + K
Sbjct: 94  LYTLSLQVISLVSNN--PQLLSLTLQYSLQS------LQGQHADLNVKISSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEINETVEEYSLYLGIVEQIAND 187


>gi|329133297|gb|AEB78589.1| geranylgeranyl diphosphate synthase 1 [Balaenoptera acutorostrata]
 gi|329133299|gb|AEB78590.1| geranylgeranyl diphosphate synthase 1 [Hippopotamus amphibius]
 gi|329133301|gb|AEB78591.1| geranylgeranyl diphosphate synthase 1 [Sus scrofa]
          Length = 119

 Score = 58.2 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 13/128 (10%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I + N +     E + +        + ++ +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              +  +D +    E +   +   KTG L   A     + +   ++ K  L      LG+
Sbjct: 56  --DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGL 109

Query: 220 IFQLADDL 227
            FQ+ DD 
Sbjct: 110 FFQIRDDY 117


>gi|126310793|ref|XP_001378652.1| PREDICTED: similar to subunit 2 of solanesyl diphosphate synthase
           [Monodelphis domestica]
          Length = 390

 Score = 58.2 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 57/146 (39%), Gaps = 8/146 (5%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +    E IH   L+H  + ++       G P   +++    AI++G+ LL  A   ++  
Sbjct: 138 LAEITELIHTAFLVHRGIVNLSELNSSDG-PLKDMRFGNKIAILSGDFLLASACTGLAQL 196

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQG---MLGGQMLDIQDEFIDETQVFMIQKMKTGALMCF 191
           +      + S  ++ L   I  +         + D       + Q+F+       AL+  
Sbjct: 197 QNTKVVELVSSALIDLVQGIYCENSTSAEENCITDDIGISTWKEQIFLSHS----ALLAK 252

Query: 192 ACESGAIMAHASQNEKERLRCFGENL 217
           +C++   +A      ++    +G+++
Sbjct: 253 SCQAAMELAKHDTEVQDMAFQYGKHM 278


>gi|321312716|ref|YP_004205003.1| isoprenyl-trasferase [Bacillus subtilis BSn5]
 gi|320018990|gb|ADV93976.1| isoprenyl-trasferase [Bacillus subtilis BSn5]
          Length = 289

 Score = 58.2 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+   +TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDVTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS         + S  +     +      L GQ  D+  +   E++   + K
Sbjct: 94  LYTLSLQVISLVSNN--PQLLSLTLQYSLQS------LQGQHADLNVKISSESEYIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEINETVEEYSLYLGIVEQIAND 187


>gi|5007036|gb|AAD37789.1| farnesyl diphosphate synthase [Artemisia annua]
          Length = 149

 Score = 58.2 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 14/152 (9%)

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+  MD  + RRG+P           I A +G+L     +    K   +       ++ 
Sbjct: 1   DDI--MDESHTRRGQPCWFRLPKVGM-IAANDGILLRN-HVPRILKKHFRGKPYXVDLVD 56

Query: 150 LTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGAL-MCFACESGAIMA 200
           L + +       GQM+D+    + E  +          I + KT             +M 
Sbjct: 57  LFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMF 115

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
               ++   ++     +G  FQ+ DD LDC  
Sbjct: 116 GEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFG 147


>gi|327261725|ref|XP_003215679.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Anolis
           carolinensis]
          Length = 387

 Score = 58.2 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVN---------------HLTALRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +               + +   +    E IH   L+H  + ++  
Sbjct: 97  MRGLVVLLISKAAGPSITTENSLQNDMISGIYPSQRTLAEITELIHTAFLVHRGIVNIGE 156

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    A+++G+ LL  A   +++ +     N +   ++S      +Q
Sbjct: 157 LTSSDG-PLKDMQFGNKLAVLSGDFLLANASTNLATLQ-----NTKVVEIMSSAIGDLVQ 210

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMK----TGALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  + +     I K        AL+  +C++   +A      + +   +
Sbjct: 211 GIYYENSYLAEENGLTDDIGISIWKEHVFLSHSALLAKSCQAAMELAKHDVETQNKAFNY 270

Query: 214 GENL 217
           G+++
Sbjct: 271 GKHM 274


>gi|145606763|ref|XP_364478.2| hypothetical protein MGG_09448 [Magnaporthe oryzae 70-15]
 gi|145014422|gb|EDJ98990.1| hypothetical protein MGG_09448 [Magnaporthe oryzae 70-15]
          Length = 339

 Score = 58.2 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 51/182 (28%), Gaps = 34/182 (18%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K +R  L+        +       V + +  IH  SL+ DD+   D+  +RR  P  H  
Sbjct: 83  KHVREKLIFSLHPWVPIARPELELVMSLVADIHNTSLMLDDIQ--DSSALRRSSPATHTV 140

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE 170
           +     I +         +  S+                                     
Sbjct: 141 FGTPQTINSAVYFTVDTIQRASTSGNPELMQA---------------------------- 172

Query: 171 FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
               T+   +   KTGAL             AS   K  L      LG  FQ+ DD ++ 
Sbjct: 173 ---LTEYLQMIDGKTGALFLMVTRLMGAFLPASAP-KSPLDRLMLLLGRYFQIRDDYVNL 228

Query: 231 EE 232
             
Sbjct: 229 VS 230


>gi|114608723|ref|XP_001146753.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1 [Pan
           troglodytes]
          Length = 399

 Score = 58.2 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 26/184 (14%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L       
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQG---- 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
             +  +    ++ +I +       K +T    GAL+  +C++   +A      ++    +
Sbjct: 226 --VYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQY 283

Query: 214 GENL 217
           G+++
Sbjct: 284 GKHM 287


>gi|332259792|ref|XP_003278965.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 [Nomascus
           leucogenys]
          Length = 399

 Score = 58.2 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 26/184 (14%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L       
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQG---- 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
             +  +    ++ +I +       K +T    GAL+  +C++   +A      ++    +
Sbjct: 226 --VYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQY 283

Query: 214 GENL 217
           G+++
Sbjct: 284 GKHM 287


>gi|109072227|ref|XP_001090452.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 1
           [Macaca mulatta]
          Length = 399

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 26/184 (14%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L       
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQG---- 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
             +  +    ++ +I +       K +T    GAL+  +C++   +A      ++    +
Sbjct: 226 --VYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQY 283

Query: 214 GENL 217
           G+++
Sbjct: 284 GKHM 287


>gi|290965788|gb|ADD70278.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Zonotrichia
           albicollis]
          Length = 376

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 53  IRSFLVTECASLFNVNHLTA--------------LRVGAAIECIHCYSLIHDDLPSMDNG 98
           +R  +V   +     +                    +    E IH   L+H  + ++   
Sbjct: 88  MRGLVVLLISKAAGPSTAELSFQHDMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGEL 147

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
               G P   +Q+    A+++G+ LL  A   ++  +      + S  +  L   I  + 
Sbjct: 148 KSCDG-PLKDMQFGNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYEN 206

Query: 159 MLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
               +     D  I     QVF+       AL+  +C++   +A  S   ++    +G++
Sbjct: 207 SKSSENCLTDDIGISRWKEQVFLRHS----ALLAKSCQAAMELAKHSAEIQDMAFQYGKH 262

Query: 217 L 217
           +
Sbjct: 263 M 263


>gi|290965822|gb|ADD70311.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Zonotrichia
           albicollis]
          Length = 376

 Score = 57.9 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 53  IRSFLVTECASLFNVNHLTA--------------LRVGAAIECIHCYSLIHDDLPSMDNG 98
           +R  +V   +     +                    +    E IH   L+H  + ++   
Sbjct: 88  MRGLVVLLISKAAGPSTAELSFQHDMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGEL 147

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
               G P   +Q+    A+++G+ LL  A   ++  +      + S  +  L   I  + 
Sbjct: 148 KSCDG-PLKDMQFGNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYEN 206

Query: 159 MLGGQMLDIQDEFIDE--TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
               +     D  I     QVF+       AL+  +C++   +A  S   ++    +G++
Sbjct: 207 SKSSENCLTDDIGISRWKEQVFLRHS----ALLAKSCQAAMELAKHSAEIQDMAFQYGKH 262

Query: 217 L 217
           +
Sbjct: 263 M 263


>gi|67524307|ref|XP_660215.1| hypothetical protein AN2611.2 [Aspergillus nidulans FGSC A4]
 gi|40745560|gb|EAA64716.1| hypothetical protein AN2611.2 [Aspergillus nidulans FGSC A4]
 gi|259488050|tpe|CBF87199.1| TPA: geranylgeranyl diphosphate synthase, putative (JCVI)
           [Aspergillus nidulans FGSC A4]
          Length = 645

 Score = 57.9 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 45/147 (30%), Gaps = 21/147 (14%)

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D    RRG+P  H+ +    AI + N +   A     S       +I  + + +L     
Sbjct: 442 DCSPKRRGQPATHVLFGHSQAINSANYMFIQAVRATRSFHNPEAMDILLEELENLY---- 497

Query: 156 LQGMLGGQMLDIQDEFI----DETQVFMIQKMKTGALMCFACES--------GAIMAHAS 203
                 GQ  D+Q ++            +   KTG +               G      +
Sbjct: 498 -----LGQSWDLQWKYNLTCPSIDDYTNMIDNKTGGMFRLLLRLLQNEAGPGGGYGCDQA 552

Query: 204 QNEKERLRCFGENLGIIFQLADDLLDC 230
                 L       G  FQ+ DD ++ 
Sbjct: 553 PGLSLLLDRLTTQFGRFFQIRDDYMNL 579


>gi|114608725|ref|XP_518665.2| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
           subunit 2 isoform 2 [Pan troglodytes]
          Length = 355

 Score = 57.5 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 26/184 (14%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L       
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQG---- 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
             +  +    ++ +I +       K +T    GAL+  +C++   +A      ++    +
Sbjct: 226 --VYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQY 283

Query: 214 GENL 217
           G+++
Sbjct: 284 GKHM 287


>gi|81157935|dbj|BAE48218.1| subunit 2 of solanesyl diphosphate synthase [Mus musculus]
          Length = 401

 Score = 57.5 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   A                 +    E IH   L+H  + ++  
Sbjct: 112 LRGLVVLLISKAAGPSTRNASCQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSE 171

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +LS      + 
Sbjct: 172 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLSSALMDLVH 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I +       K +T     AL+  +C++   +A      ++    +
Sbjct: 226 GVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQY 285

Query: 214 GENL 217
           G+++
Sbjct: 286 GKHM 289


>gi|329133307|gb|AEB78594.1| geranylgeranyl diphosphate synthase 1 [Manis pentadactyla]
          Length = 119

 Score = 57.5 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 13/128 (10%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I + N +     E + +        + +  +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
              +  +D +    E +   +   KTG L   A     + +   ++ K  L      LG+
Sbjct: 56  --DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNT----LGL 109

Query: 220 IFQLADDL 227
            FQ+ DD 
Sbjct: 110 FFQIRDDY 117


>gi|330796102|ref|XP_003286108.1| hypothetical protein DICPUDRAFT_150024 [Dictyostelium purpureum]
 gi|325083927|gb|EGC37367.1| hypothetical protein DICPUDRAFT_150024 [Dictyostelium purpureum]
          Length = 377

 Score = 57.5 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 96/284 (33%), Gaps = 57/284 (20%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTAS-----HMQTQHNDRLLSAIRYALLGGKKIRSF 56
           N     +  E  K    I  D++ +        H+       L S I   ++GGK IR  
Sbjct: 4   NFNFEEERDEFIKLFPIIKQDIINEFPKMKLPNHIVDYITTFLNSPI---IIGGKMIRGL 60

Query: 57  -LVTECASLFNV---------------NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYI 100
             +    +L +                +   A  +G  +E +  + L+ DD+  MDNG  
Sbjct: 61  GFIYSFNTLISKNKNNNYNDKEITISTSKHEARVIGWCLEFL-SFFLVTDDI--MDNGLT 117

Query: 101 RRGKPTVHIQYDE------VTAIIA-GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
           RRG+P  +              ++A  + +L  +F +    K   K       +L L   
Sbjct: 118 RRGEPCWYRNPSPFNPSEYKVGLLAINDSVLIESF-LFFLLKKYFKHKSYYVDVLELFRE 176

Query: 154 IGLQGMLGGQMLDIQD--------EFIDETQVFMIQKMKTGALMCFA-CESGAIMAHA-- 202
             +     GQ+LD              +      I   K+   M ++  +   +++    
Sbjct: 177 C-IFYTATGQLLDTSSLHQKRGDFSNFNFENYSKICIYKSSYSMFYSQIKLAILLSGGKI 235

Query: 203 --SQN-----EKERLRCFGENLGIIFQLADDLLDCEED---LPK 236
                     E+E +R     LGI  Q  DD LDC  +   L K
Sbjct: 236 IVDDEQEKTIEEELIRDISYELGIYGQTQDDYLDCYAEKEVLGK 279


>gi|269973905|ref|NP_001161761.1| decaprenyl-diphosphate synthase subunit 2 isoform 2 [Mus musculus]
 gi|74146194|dbj|BAE24234.1| unnamed protein product [Mus musculus]
          Length = 352

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   A                 +    E IH   L+H  + ++  
Sbjct: 112 LRGLVVLLISKAAGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSE 171

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +LS      + 
Sbjct: 172 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLSSALMDLVH 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I +       K +T     AL+  +C++   +A      ++    +
Sbjct: 226 GVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQY 285

Query: 214 GENL 217
           G+++
Sbjct: 286 GKHM 289


>gi|269973903|ref|NP_082048.2| decaprenyl-diphosphate synthase subunit 2 isoform 1 [Mus musculus]
 gi|85718630|sp|Q33DR3|DLP1_MOUSE RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           2; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 2; AltName: Full=Solanesyl-diphosphate synthase
           subunit 2
 gi|187955412|gb|AAI47694.1| Prenyl (solanesyl) diphosphate synthase, subunit 2 [Mus musculus]
 gi|187955734|gb|AAI47695.1| Prenyl (solanesyl) diphosphate synthase, subunit 2 [Mus musculus]
          Length = 401

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   A                 +    E IH   L+H  + ++  
Sbjct: 112 LRGLVVLLISKAAGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSE 171

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +LS      + 
Sbjct: 172 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLSSALMDLVH 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I +       K +T     AL+  +C++   +A      ++    +
Sbjct: 226 GVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQY 285

Query: 214 GENL 217
           G+++
Sbjct: 286 GKHM 289


>gi|311069671|ref|YP_003974594.1| isoprenyl-trasferase [Bacillus atrophaeus 1942]
 gi|310870188|gb|ADP33663.1| isoprenyl-trasferase [Bacillus atrophaeus 1942]
          Length = 289

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 64  LFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
            F+    TA+ +  + IE +   + I DD+   DN           ++ D    I A   
Sbjct: 40  AFDGKDDTAIELLASGIELLILSADIFDDIEDKDN------LQASWMKIDPSIVINAATA 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           L T + ++IS      +    +      +        L GQ +D+      E++   + K
Sbjct: 94  LYTLSLQVISLVSNNPQHLSLTLQYSLQS--------LQGQHVDLTLTVSSESEFIEMIK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +K+G+L+      G  +A  +    E +  +   LGI+ Q+A+D
Sbjct: 146 LKSGSLVTLPSVLGVYLA--TGEFNETVDEYSHYLGIVEQIAND 187


>gi|188475812|gb|ACD50074.1| putative geranylgeranyl diphosphate synthase [uncultured
           crenarchaeote MCG]
          Length = 333

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 65/181 (35%), Gaps = 31/181 (17%)

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMD-----------NGYIRR 102
           RS ++         N    L +  A             L  +D           +   ++
Sbjct: 58  RSGVLALACEAVGGNPAEVLPLQVA-------------LLFIDATMDIHDDIIDDSVSKK 104

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
            + TV+ +  +   ++ G+G +   F  +      L  ++R +++  +T+   L  ++  
Sbjct: 105 NRGTVYGKLGKGNTLLIGDGFMVKGFGYLFQSLEHLAKDLRQRVLAEVTY--FLYEVVAA 162

Query: 163 QMLDI----QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
            + ++    +   +       I   K GA +    + GAI    S  + + L  +G N+G
Sbjct: 163 HLSEVALKGKKWRVKPNDYLQILMRK-GADIEGRMKLGAICGRGSARDVDALTTYGRNVG 221

Query: 219 I 219
           +
Sbjct: 222 V 222


>gi|148673066|gb|EDL05013.1| mCG2750, isoform CRA_b [Mus musculus]
          Length = 390

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   A                 +    E IH   L+H  + ++  
Sbjct: 112 LRGLVVLLISKAAGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSE 171

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +LS      + 
Sbjct: 172 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLSSALMDLVH 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        ++  I +       K +T     AL+  +C++   +A      ++    +
Sbjct: 226 GVYQENSASTKENSIPDDIGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQY 285

Query: 214 GENL 217
           G+++
Sbjct: 286 GKHM 289


>gi|321473075|gb|EFX84043.1| hypothetical protein DAPPUDRAFT_194691 [Daphnia pulex]
          Length = 336

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 61/171 (35%), Gaps = 24/171 (14%)

Query: 54  RSFLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           R  LV   +    ++    +      +    + +H   LIH  + ++         P   
Sbjct: 106 RGLLVLLVSKAAKIDQTQDILPKQRTLAEITDLVHAAHLIHTGVINL-------NTPNES 158

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++     A++ G+ LL  +  ++++ +      + +Q +   +    +  +      +  
Sbjct: 159 LEMGNKMAVLCGDFLLARSCVLLANLQNLKVVELIAQAISDFSTAEFIDIVA-----NET 213

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           D  +D  +     +  T  L+  AC+S  I+          L  FG+  G+
Sbjct: 214 DSALDRWRYQSKLRYGT--LLAHACQSSLILGDNVD-----LVEFGKYFGL 257


>gi|62079229|ref|NP_001014271.1| decaprenyl-diphosphate synthase subunit 2 [Rattus norvegicus]
 gi|73620007|sp|Q5U2R1|DLP1_RAT RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           2; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 2
 gi|55250165|gb|AAH85898.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Rattus
           norvegicus]
          Length = 401

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   +                 +    E IH   L+H  + ++  
Sbjct: 112 LRGLVVLLISKAAGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSE 171

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +++    A+++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 172 LQSSDG-PLKDMKFGNKIAVLSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        Q   I +       K +T     AL+  +C++   +A      ++    +
Sbjct: 226 GIYQENSASTQGNPIPDDIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQY 285

Query: 214 GENL 217
           G+++
Sbjct: 286 GKHM 289


>gi|328793317|ref|XP_001122685.2| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
          Length = 262

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 47/162 (29%), Gaps = 20/162 (12%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
            H      DD+  +DN  +RR +PT H++     AI  G  L T  +++I          
Sbjct: 4   FHTM---IDDI--LDNANMRRNQPTWHVKVGLG-AINDGLILETCIYKLIKKHFKSKNCY 57

Query: 142 IRSQLMLSLTHNIGLQGML------GGQMLDIQDEFIDETQVFMIQKMKTGAL-----MC 190
                +L   H     G             +         +   + K KT          
Sbjct: 58  TDIVDILLKYHTKTAHGECLDILISTDWAKNANFNLFSMDRYNHLIKHKTSYFSFILPFS 117

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A     I+                 +  +FQ+ +D LD   
Sbjct: 118 LAMRFAGII---DLEMHREAEKILTKISHLFQVQNDFLDYYS 156


>gi|149046943|gb|EDL99691.1| rCG58492, isoform CRA_a [Rattus norvegicus]
          Length = 390

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   +                 +    E IH   L+H  + ++  
Sbjct: 112 LRGLVVLLISKAAGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSE 171

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +++    A+++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 172 LQSSDG-PLKDMKFGNKIAVLSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        Q   I +       K +T     AL+  +C++   +A      ++    +
Sbjct: 226 GIYQENSASTQGNPIPDDIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQY 285

Query: 214 GENL 217
           G+++
Sbjct: 286 GKHM 289


>gi|224048353|ref|XP_002193223.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
           subunit 2 [Taeniopygia guttata]
          Length = 449

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 61/156 (39%), Gaps = 7/156 (4%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + +  + +   +    E IH   L+H  + ++       G P   +Q+    A+++G+ L
Sbjct: 113 MVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDG-PLKDMQFGNKMAVLSGDFL 171

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE--TQVFMIQ 181
           L  A   ++  +      + S  +  L   I  +     +     D  I     QVF+  
Sbjct: 172 LANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSKSSENCLTDDIGISRWKEQVFLSH 231

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                AL+  +C++   +A  S   ++    +G+++
Sbjct: 232 S----ALLAKSCQAAMELAKHSAEIQDMAFQYGKHM 263


>gi|149046944|gb|EDL99692.1| rCG58492, isoform CRA_b [Rattus norvegicus]
          Length = 329

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   +                 +    E IH   L+H  + ++  
Sbjct: 51  LRGLVVLLISKAAGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSE 110

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +++    A+++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 111 LQSSDG-PLKDMKFGNKIAVLSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 164

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
           G+        Q   I +       K +T     AL+  +C++   +A      ++    +
Sbjct: 165 GIYQENSASTQGNPIPDDIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQY 224

Query: 214 GENL 217
           G+++
Sbjct: 225 GKHM 228


>gi|50744624|ref|XP_419804.1| PREDICTED: similar to Prenyl (decaprenyl) diphosphate synthase,
           subunit 2 [Gallus gallus]
          Length = 379

 Score = 56.7 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 64/181 (35%), Gaps = 21/181 (11%)

Query: 53  IRSFLVTECASLFNVNHLTA--------------LRVGAAIECIHCYSLIHDDLPSMDNG 98
           +R  +V   +     +                    +    E IH   L+H  + ++   
Sbjct: 91  MRGLVVLLISKAAGPSTAELSFQHNMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGEL 150

Query: 99  YIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG 158
               G P   +Q+    A+++G+ LL  A   ++  +      + S  +  L   I  + 
Sbjct: 151 KSCDG-PLKDMQFGNKMAVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYEN 209

Query: 159 MLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
               +     D  I   + QVF+       AL+  +C++   +A  S   ++    +G++
Sbjct: 210 SRSSENCLTDDIGISTWKEQVFLSHS----ALLAKSCQAAMELAKHSAEMQDMAFRYGKH 265

Query: 217 L 217
           +
Sbjct: 266 M 266


>gi|119709592|dbj|BAF42693.1| geranylgeranyl diphosphate synthase-3-A-isoform [Nasutitermes
           takasagoensis]
          Length = 218

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 61/158 (38%), Gaps = 12/158 (7%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           + +H ++LL    +   + GK+I S +         V     + +      IH   LI +
Sbjct: 17  EREHEEKLLQPFAHITQVPGKQILSRIPHAYNYWLKVPADKLIVLKEIDYIIHHSGLIFN 76

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   DN  +RRG P  H +Y   + I A   LL      + S        + ++ +L +
Sbjct: 77  DIQ--DNSILRRGIPVAHSKYGVPSTINAVIYLLLKGLMKVQSLNHPDAIAVCTEHLLEM 134

Query: 151 THNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTG 186
            +  GL+       +  +D +      +   + K K G
Sbjct: 135 YYGQGLE-------ICWRDNYTCPLLEEYKQMIKRKAG 165


>gi|9230797|gb|AAF82176.1| ComQ [Bacillus mojavensis]
          Length = 287

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 18/173 (10%)

Query: 57  LVTECASLFNVNHLTALRV-GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
           L       FN     A+ +    IE +     I+DDL   DN      +  V ++ D   
Sbjct: 33  LALHHYLAFNGQDKKAIELLATGIELLILSFDIYDDLQDKDN------RNAVWMKIDSSI 86

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
           A+ A   L T + +++     + +    SQ +L+          + GQ  DI +    E 
Sbjct: 87  ALNAVTALYTLSIQVMCQASHEPE---FSQKILNFALQS-----IQGQHDDIVNAPQTEE 138

Query: 176 QVFMIQ-KMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
               I  K K+GAL    C  G ++A  +      +  +   LGI+ Q+ +D 
Sbjct: 139 TCLCILSKNKSGALTALPCVMGVMLA--TGKYHPIVASYSYELGIMSQIDNDY 189


>gi|209525924|ref|ZP_03274458.1| solanesyl diphosphate synthase [Arthrospira maxima CS-328]
 gi|209493601|gb|EDZ93922.1| solanesyl diphosphate synthase [Arthrospira maxima CS-328]
          Length = 132

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           S    E L  +G N+G+ FQ+ DD+LD   
Sbjct: 2   SAELAEDLYKYGRNIGLAFQIVDDILDFTG 31


>gi|297678820|ref|XP_002817259.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Pongo
           abelii]
          Length = 415

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 60/147 (40%), Gaps = 11/147 (7%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSP 134
           +    E IH   L+H  + +++      G P   +Q+    AI++G+ LL  A   ++  
Sbjct: 164 LAEITELIHTALLVHRGIVNLNELQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALL 222

Query: 135 KTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMC 190
           +      + +  ++ L         +  +    ++ +I +       K +T    GAL+ 
Sbjct: 223 QNTKVVELLASALMDLVQG------VYHENSTSKESYITDDIGISTWKEQTFLSHGALLA 276

Query: 191 FACESGAIMAHASQNEKERLRCFGENL 217
            +C++   +A      ++    +G+++
Sbjct: 277 KSCQAAMELAKHDAEVQDMAFQYGKHM 303


>gi|119709594|dbj|BAF42694.1| geranylgeranyl diphosphate synthase-3-B-isoform [Nasutitermes
           takasagoensis]
          Length = 316

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 61/158 (38%), Gaps = 12/158 (7%)

Query: 32  QTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           + +H ++LL    +   + GK+I S +         V     + +      IH   LI +
Sbjct: 17  EREHEEKLLQPFAHITQVPGKQILSRIPHAYNYWLKVPADKLIVLKEIDYIIHHSGLIFN 76

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   DN  +RRG P  H +Y   + I A   LL      + S        + ++ +L +
Sbjct: 77  DIQ--DNSILRRGIPVAHSKYGVPSTINAVIYLLLKGLMKVQSLNHPDAIAVCTEHLLEM 134

Query: 151 THNIGLQGMLGGQMLDIQDEFID--ETQVFMIQKMKTG 186
            +  GL+       +  +D +      +   + K K G
Sbjct: 135 YYGQGLE-------ICWRDNYTCPLLEEYKQMIKRKAG 165


>gi|167519819|ref|XP_001744249.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777335|gb|EDQ90952.1| predicted protein [Monosiga brevicollis MX1]
          Length = 237

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 12/177 (6%)

Query: 54  RSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE 113
           RS  +   A +F ++     ++   ++  H  SLI DD+   D+  +RR +   HI++  
Sbjct: 1   RSKSIQALADVFEIDDCDLQQLKQCVDRFHELSLIADDIE--DDSTLRRDRECAHIRFGI 58

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             A+ +   L     + +            + L+         QG+      +     +D
Sbjct: 59  PAAMNSTYLLFFKLIQSVPERFQAHHHETLTALVDGSVRAHRGQGLEIYWRDNKYCPTLD 118

Query: 174 ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           E  + M+Q            ES   +  + Q +   L       GI FQ+ DD ++ 
Sbjct: 119 E-YIEMVQFGGKW------TESLGWVWKSPQQQILELFDI---TGIFFQIRDDYINL 165


>gi|302697469|ref|XP_003038413.1| hypothetical protein SCHCODRAFT_35228 [Schizophyllum commune H4-8]
 gi|300112110|gb|EFJ03511.1| hypothetical protein SCHCODRAFT_35228 [Schizophyllum commune H4-8]
          Length = 228

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 53/163 (32%), Gaps = 18/163 (11%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            T +R+   I  IH  S++H+ + +        G    H       AI+ G+ LL  A  
Sbjct: 4   PTQVRLAQIIAMIHTASVLHEGVAA--------GSEAAH---GNKLAILGGDFLLGRASS 52

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALM 189
            +++        + +  + +      ++                         +   +LM
Sbjct: 53  ALAALGAAEAVELIAAAIANTVEGTVMRVATSSPAEAW-------ASYVRRVYLGGASLM 105

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                +  ++        +    F  N+GI  Q+ +D+ + E 
Sbjct: 106 AKGARAAVVLGGCRGQLPDVAYAFARNMGIAQQIMEDVREWEA 148


>gi|146319409|ref|YP_001199121.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
 gi|145690215|gb|ABP90721.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
          Length = 168

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            + KT  L   AC+ G+ +   S+ +       G+ LG+ FQL DDL+D + D+ 
Sbjct: 15  IQGKTAFLFGLACQLGSFVPGQSRKDSSMAFRSGQALGMAFQLRDDLIDYQLDVA 69


>gi|238583240|ref|XP_002390180.1| hypothetical protein MPER_10587 [Moniliophthora perniciosa FA553]
 gi|215453293|gb|EEB91110.1| hypothetical protein MPER_10587 [Moniliophthora perniciosa FA553]
          Length = 161

 Score = 55.6 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 9/98 (9%)

Query: 17  DTILDDLLLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASLF------NVNH 69
           + I ++LL         Q      S  + Y + GGK  R   V + A +       +  +
Sbjct: 18  NVIREELLTHFKGEGMPQDAVEWYSRNLDYNVPGGKLNRGMSVVDTAEILKGRPLKDGEY 77

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           L A  +G  +E +  + L+ DDL  MD+   RRG+P  
Sbjct: 78  LQAAVLGWGVELLQAFFLVSDDL--MDSSVTRRGQPCC 113


>gi|79085198|gb|ABB51996.1| ComQ [Bacillus subtilis]
          Length = 288

 Score = 55.6 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 34/209 (16%)

Query: 21  DDLLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           DDLL      +++++      +  + Y + GGK                    A+ +GA 
Sbjct: 12  DDLLKLLILFIESRNFFPFAESAFLHYCVFGGK----------------EFEIAIELGAG 55

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE I   S I DD+   DN           ++ D+  A+     L T   +   S K   
Sbjct: 56  IEIITLSSDILDDIQDNDNLTEP------WMKIDQSVALSTVFSLYTVGLQ---SLKAVD 106

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            ++     ++    +        GQ  DI ++   E +     K+K G+L   A  SG +
Sbjct: 107 PNSDIVNCIIKYCLDAM-----QGQHRDIINKPQTEEECLEAMKLKCGSLFALANVSGTM 161

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227
           +A  + N+      + +  GI  Q+  D 
Sbjct: 162 LATGTYNKVVESYSYSK--GIFEQIYGDY 188


>gi|189055159|dbj|BAG38145.1| unnamed protein product [Homo sapiens]
          Length = 399

 Score = 55.6 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 66/184 (35%), Gaps = 26/184 (14%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L       
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQG---- 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
             +  +    ++ +I +       K +T    GAL+  +C++   +A      +     +
Sbjct: 226 --VYHENSTSKESYITDDIGISTWKEQTFLSHGALLARSCQAAMELAKHDAEVQNMAFQY 283

Query: 214 GENL 217
           G+++
Sbjct: 284 GKHM 287


>gi|307205407|gb|EFN83748.1| Decaprenyl-diphosphate synthase subunit 2 [Harpegnathos saltator]
          Length = 349

 Score = 55.6 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 5/154 (3%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +    E I    LIH  L ++D           H+ +    A+++G+ LL+ +   +++
Sbjct: 93  ALAEITEMIRTSGLIHKGLVNIDVNGSLGASEMDHMTFGNKIALLSGDYLLSNSCAELAA 152

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGAL 188
            + Q    + S  +  L     +                D T        ++     G+L
Sbjct: 153 LRNQDITFLISSALADLAQAEFVARRDNQNYPIPSIPPKDRTGYALEEWELLNIYGAGSL 212

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +  +C+    +A  S   +E    FG++L + +Q
Sbjct: 213 LGKSCQGTLKLAGHSNEIQEEGHKFGQHLSLAWQ 246


>gi|228962654|ref|ZP_04123960.1| Pre-ComX modifying enzyme [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228797045|gb|EEM44349.1| Pre-ComX modifying enzyme [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 298

 Score = 55.2 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 15/175 (8%)

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTA 116
           L      +FN +    ++  +A+E +        +L       I+      +       A
Sbjct: 35  LTILHFEMFNGSSNEIIKAASAVEYL--------NLALDIIDDIQDEDNAGNTWGSINKA 86

Query: 117 IIAGNGLLTYAFEIISSPKTQLKD-NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDET 175
                 LL YA  +I   +  L D  +  +  +    N      + GQ LD+     +E 
Sbjct: 87  T-----LLNYAILLIFISQKILIDIELMKKDAILRYFNELTITAIQGQHLDLNMVCTNEE 141

Query: 176 QVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           Q   I K K+GAL   A   G ++A       E +  +   +GI  QL +D  D 
Sbjct: 142 QYLEIIKKKSGALTSLAVVIGVLIAQ-DNYALESIIEYATYIGISGQLLNDASDV 195


>gi|332021468|gb|EGI61836.1| Geranylgeranyl pyrophosphate synthetase [Acromyrmex echinatior]
          Length = 253

 Score = 55.2 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 13/123 (10%)

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
            H  Y   +++ A N +L  A E + + K      +  + +L L    G+        + 
Sbjct: 24  AHSVYGTASSLSAANYVLFIALERVINLKHPEATQVYMEQLLELHRGQGM-------DIF 76

Query: 167 IQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
            +D FI   E    ++   KTG L   A     + +   ++    +      LG+ FQ+ 
Sbjct: 77  WRDNFICPTEEDYKIMTIRKTGGLFNLAVRLMKLFSTYEEDFSSLIAT----LGLYFQIR 132

Query: 225 DDL 227
           DD 
Sbjct: 133 DDY 135


>gi|218195738|gb|EEC78165.1| hypothetical protein OsI_17735 [Oryza sativa Indica Group]
          Length = 165

 Score = 55.2 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 12/88 (13%)

Query: 162 GQMLDIQDEFIDETQ--------VFMIQKMKTGAL-MCFACESGAIMAHASQNEKERLRC 212
           GQMLD+                    I K KT          +  +++ A   +   L+ 
Sbjct: 13  GQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAYYSFYLPVANALLLSGAKLEDFSGLKD 72

Query: 213 FGENLGIIFQLADDLLDCEED---LPKK 237
               +GI FQ+ DD LDC  D   + K+
Sbjct: 73  ILIEMGIYFQIQDDYLDCFADPNTIGKE 100


>gi|322800723|gb|EFZ21627.1| hypothetical protein SINV_04193 [Solenopsis invicta]
          Length = 325

 Score = 55.2 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 65/212 (30%), Gaps = 26/212 (12%)

Query: 43  IRYALLGGKKIRSFLVTECASLFNVNHLT-------ALRVGAAIECIHCYSLIHDDLPSM 95
           ++Y + G  K+   +V         N          A  +   +E    Y +I DD+  +
Sbjct: 18  LQYNVTGTTKLHGLIVIYAYKSITPNEQQTEDNIRLASILAWCMEMAISYLIIIDDI--L 75

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D    RRG+P  +   D    +   + LL  +       +   K       ++       
Sbjct: 76  DQSLFRRGQPCWYRHDDIGL-MAINDALLLESIVYFL-IRKHFKGKECYDNLVETFQQDI 133

Query: 156 LQGMLGGQMLDIQDEF-------IDETQVFMIQKMKTGALMCFACESGAIMAHASQNE-- 206
           +   L GQ LD+   +           +   I K K    +          A    +E  
Sbjct: 134 VFKTLIGQFLDMSLTYKKSNLDQFTMNRYNSIAKWKEYGSLFVPTVLAMHFAGIKDSEMF 193

Query: 207 ---KERLRCFGENLGIIFQLADDLLDCEEDLP 235
              +  L      L   +Q+ DD L C  D  
Sbjct: 194 KQSETILSELIVPL---YQIQDDYLGCFGDFE 222


>gi|270602136|ref|ZP_06221589.1| geranyltranstransferase [Haemophilus influenzae HK1212]
 gi|270318209|gb|EFA29415.1| geranyltranstransferase [Haemophilus influenzae HK1212]
          Length = 105

 Score = 54.8 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 202 ASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           A +  ++ L  + E +G+ FQ+ DD+LD E D  
Sbjct: 9   ADKTLEQSLTQYAEAIGLAFQVQDDILDIEGDSA 42


>gi|212674784|gb|ACJ37157.1| geranylgeranyl pyrophosphate synthase [Planococcus sp. Eg-Natrun]
          Length = 133

 Score = 54.8 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 1/118 (0%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG    H+ +     I+ GN  L    ++ +         +R   +L  T N  L G   
Sbjct: 10  RGPGPEHLHWACSNGILIGNLFLAATHQVFARVDLPHPARLRLLDLLEHTMNDSLVGEFL 69

Query: 162 GQMLDIQDEFIDETQVFMIQKMKTG-ALMCFACESGAIMAHASQNEKERLRCFGENLG 218
              L  +    D +    + ++KT          + +I+A  S+ ++ ++R  G +LG
Sbjct: 70  DVGLSSRAIASDISTALEMSRLKTATYTFELPLRAASILAGLSEEDERKVRVIGTHLG 127


>gi|255732617|ref|XP_002551232.1| hypothetical protein CTRG_05530 [Candida tropicalis MYA-3404]
 gi|240131518|gb|EER31078.1| hypothetical protein CTRG_05530 [Candida tropicalis MYA-3404]
          Length = 140

 Score = 54.8 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 53  IRSFLVTECASLFN--VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           +R+  +     LF    +     ++   I   H  SL+ DD+   D+  +RRG P  HI+
Sbjct: 40  VRTRFLLAFNELFYQVEDEELLHKISDIISVFHNSSLLIDDIE--DDSQMRRGLPVAHIE 97

Query: 111 YDEVTAIIAGNGLLTYAFE 129
           Y     I  GN +   A +
Sbjct: 98  YGIPLTINCGNMMYFVAVQ 116


>gi|77998096|gb|ABB16429.1| ComQ [Bacillus mojavensis]
          Length = 288

 Score = 54.8 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 34/209 (16%)

Query: 21  DDLLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           DDLL     ++++++      +  + Y + GGK                    A+ +GA 
Sbjct: 12  DDLLKLLILYIESRNFFPFAESAFLHYCVFGGK----------------EFEIAIELGAG 55

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           IE I   S I DD+   DN           ++ D+  A+     L T   +   S K   
Sbjct: 56  IEIITLSSDILDDIQDNDNLTEP------WMKIDQSVALSTVFSLYTVGLQ---SLKAVD 106

Query: 139 KDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAI 198
            ++     ++    +      + GQ  DI ++   E +     K+K G+L   A  SG +
Sbjct: 107 PNSDIVNCIIKYCLDA-----IQGQHRDIINKPQTEEECLEAMKLKCGSLFALANVSGTM 161

Query: 199 MAHASQNEKERLRCFGENLGIIFQLADDL 227
           +A  + N+      + +  GI  Q+  D 
Sbjct: 162 LATGTYNKVVESYSYLK--GIFEQIYGDY 188


>gi|67523903|ref|XP_660011.1| hypothetical protein AN2407.2 [Aspergillus nidulans FGSC A4]
 gi|40745362|gb|EAA64518.1| hypothetical protein AN2407.2 [Aspergillus nidulans FGSC A4]
 gi|259487812|tpe|CBF86781.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 675

 Score = 54.8 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 68/209 (32%), Gaps = 37/209 (17%)

Query: 32  QTQHNDRLLSAIRYA-LLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHD 90
           +    + +L+   Y   L GKK    L+        +   +   +G     +   +L+ D
Sbjct: 402 KAPAAEIVLAPWEYIRSLPGKKTLGRLIDCLQCWLTLPEDSTNIIGEVSRMLFDAALMLD 461

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           D+   D   +RRG+P  H  + +   + +   L      ++   K               
Sbjct: 462 DIQ--DGSRLRRGRPAAHAVFGQPQTLNSATYLYVKGSRLVKKLK--------------- 504

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                          +  D FI   +  ++   KTG           + +  S+   E +
Sbjct: 505 ------------HSNECADVFI---EYLVMVDNKTGGFFRLVLRLLEVESE-SEPNPELM 548

Query: 211 RCFGENLGIIFQLADDLLDCEEDL--PKK 237
             F   LG  +Q+ DD L+   +    KK
Sbjct: 549 HLF-TLLGRYYQIRDDYLNLASEEYTAKK 576


>gi|169808399|ref|NP_065114.3| decaprenyl-diphosphate synthase subunit 2 [Homo sapiens]
 gi|73620006|sp|Q86YH6|DLP1_HUMAN RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           2; AltName: Full=Candidate tumor suppressor protein;
           AltName: Full=Decaprenyl pyrophosphate synthase subunit
           2
 gi|55665807|emb|CAH73573.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
 gi|55958730|emb|CAI16109.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
 gi|56203647|emb|CAI22356.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
 gi|57162622|emb|CAI40036.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
 gi|81157933|dbj|BAE48217.1| subunit 2 of decaprenyl diphosphate synthase [Homo sapiens]
 gi|119568785|gb|EAW48400.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
          Length = 399

 Score = 54.8 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 66/184 (35%), Gaps = 26/184 (14%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L       
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQG---- 225

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCF 213
             +  +    ++ +I +       K +T    GAL+  +C++   +A      +     +
Sbjct: 226 --VYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQY 283

Query: 214 GENL 217
           G+++
Sbjct: 284 GKHM 287


>gi|9719409|gb|AAF97788.1| candidate tumor suppressor protein [Homo sapiens]
          Length = 399

 Score = 54.8 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 65/182 (35%), Gaps = 22/182 (12%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L   +  +
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHE 229

Query: 158 GMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                +     D  I   + Q F+      GAL+  +C++   +A      +     +G+
Sbjct: 230 NSTSKESYITDDIGISTWKEQTFLSH----GALLAKSCQAAMELAKHDAEVQNMAFQYGK 285

Query: 216 NL 217
           ++
Sbjct: 286 HM 287


>gi|25058280|gb|AAH39906.1| Prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
          Length = 399

 Score = 54.8 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 65/182 (35%), Gaps = 22/182 (12%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L   +  +
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHE 229

Query: 158 GMLGGQMLDIQDEFID--ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
                +     D  I   + Q F+      GAL+  +C++   +A      +     +G+
Sbjct: 230 NSTSKESYITDDIGISTWKEQTFLSH----GALLAKSCQAAMELAKHDAEVQNMAFQYGK 285

Query: 216 NL 217
           ++
Sbjct: 286 HM 287


>gi|19115339|ref|NP_594427.1| decaprenyl diphosphate synthase subunit 2 Dlp1 [Schizosaccharomyces
           pombe 972h-]
 gi|60389474|sp|O13851|DLP1_SCHPO RecName: Full=Decaprenyl-diphosphate synthase subunit 2; AltName:
           Full=All-trans-decaprenyl-diphosphate synthase subunit
           2; AltName: Full=Decaprenyl pyrophosphate synthase
           subunit 2
 gi|2239206|emb|CAB10123.1| decaprenyl diphosphate synthase subunit 2 Dlp1 [Schizosaccharomyces
           pombe]
 gi|34393187|dbj|BAC82458.1| decaprenyl diphosphate synthase subunit2 [Schizosaccharomyces
           pombe]
          Length = 294

 Score = 54.8 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 69/177 (38%), Gaps = 29/177 (16%)

Query: 55  SFLVTECASL-FNVNH------LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
             LV   +    N +           ++    E IH  ++IH ++          G+   
Sbjct: 90  PLLVLLMSRASVNGDPPSQQLFQRYKQLARVTELIHAANIIHINI----------GEEQS 139

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
           + Q     A + G+ LL  A    S     L++N  +++M S+  N     ++ G     
Sbjct: 140 NEQI--KLATLVGDYLLGKA----SVDLAHLENNAITEIMASVIAN-----LVEGHFGSR 188

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLA 224
           Q+  +  +       +++  +   AC   +I+ ++SQ   +    +G+ LG+  QLA
Sbjct: 189 QNGSVGLSN-ERTILLQSAFMPAKACLCASILNNSSQYINDACFNYGKFLGLSLQLA 244


>gi|322802276|gb|EFZ22672.1| hypothetical protein SINV_06205 [Solenopsis invicta]
          Length = 917

 Score = 54.4 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 62/156 (39%), Gaps = 7/156 (4%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPT--VHIQYDEVTAIIAGNGLLTYAFEII 131
            +    E I   +LIH  L +++       + +   +I +    A++ G+ LL+ +   +
Sbjct: 149 ALAEITEMIRTSNLIHRGLVNINTKDTGSLESSELNNITFGNKIALLCGDYLLSNSCTEM 208

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTG 186
           ++ K Q    + S  +  L     +                D T        ++     G
Sbjct: 209 AALKNQDLLLLISAAVRDLCQAEFVSRRDNQNFPIPSIPPEDRTGYALREWTLLNTYGAG 268

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +L+  +C+S   +A  S+  +E+   FG++L + +Q
Sbjct: 269 SLLGKSCQSTLKIAGHSKEIEEKGYEFGKHLALAWQ 304


>gi|77998092|gb|ABB16426.1| ComQ [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 279

 Score = 54.4 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 20/179 (11%)

Query: 63  SLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNG 122
           +L    +   L +   IE +     I DDL   DN           +  D   ++ A   
Sbjct: 40  ALSGNQYSHILMLAGGIELLILAFDIFDDLEDEDN------IEKEWMAIDPSLSLNAATT 93

Query: 123 LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK 182
           + T   E I S     + +  +               + GQ  D+++    E +   + K
Sbjct: 94  IYTLGLETICSISDSSEFHQLTLKYALNA--------MQGQHDDLRNSPETEEECIQMMK 145

Query: 183 MKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL----DCEEDLPKK 237
            K+G+L   +    A++A+   N+   +  +   +GII QL +D      D   D+ KK
Sbjct: 146 QKSGSLTAMSAVLAAMLANGQFNQI--IEDYAYKIGIIKQLENDYFGLVNDQRSDIRKK 202


>gi|321473073|gb|EFX84041.1| hypothetical protein DAPPUDRAFT_99962 [Daphnia pulex]
          Length = 331

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 37/179 (20%)

Query: 54  RSFLVTECASLFNVNHLTAL-----RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH 108
           R  LV   +          +     ++    E IH   +IH  + ++         P  +
Sbjct: 105 RGLLVLLVSKAGKHKANEDILPNQRKLAEITEQIHTAHIIHTGIINL-------ATPNEN 157

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
           ++     AI+ G+ + + +   ++  K      +  Q +   +                 
Sbjct: 158 LEMGNKMAILCGDFIQSRSSIQLAELKNIKIIELFGQAIADFSAV--------------- 202

Query: 169 DEFIDETQV--FMIQKMKT----GALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
            EFI+E       +   KT    G L+  AC+S  I+   + +  E  + FG  +   F
Sbjct: 203 -EFINEDTYCALDLWTQKTKMRYGTLLSNACQSTLILGG-NMDLLESAKNFGLEI--AF 257


>gi|13641224|gb|AAK31630.1| geranyl-geranyl diphosphate synthase-like [Leptomonas sp. F6]
          Length = 173

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC---E 231
             +  I   KTG      C    ++  A  +    +  FG  LG+ FQ+ D  L+    E
Sbjct: 68  DALDAIHTYKTGGAAGTLCAMACVLCDAPPDVSVAMESFGRALGLAFQIVDAALNVSGFE 127

Query: 232 EDLPKK 237
            DL ++
Sbjct: 128 GDLKEE 133


>gi|33772137|gb|AAQ54505.1| geranylgeranyl pyrophosphate synthase [Malus x domestica]
          Length = 84

 Score = 53.6 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 29/48 (60%)

Query: 181 QKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLL 228
           Q+ K G +   +   G ++  A  +E +RLR +G  +G+++++ DD+L
Sbjct: 1   QEKKFGEMSQCSAVCGGLLGGAEDDELDRLRRYGRAVGVLYRVVDDIL 48


>gi|80978890|gb|ABB54693.1| pre-ComX modifying enzyme [Bacillus mojavensis]
          Length = 279

 Score = 53.6 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 20/176 (11%)

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             ++L  L +   IE +     I DDL   DN   +       ++ D   ++ A   L T
Sbjct: 43  GNSYLHILTLAGGIELLIIAFDIFDDLEDEDNFEKK------WMEIDSSLSLNAATTLYT 96

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKT 185
              E I S   + +    +               + GQ  D+ +    E +   + K K+
Sbjct: 97  LGLETICSISDKAEYQRLTLKYALNA--------MQGQHDDLINFPETEEECIQMMKQKS 148

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL--L--DCEEDLPKK 237
           G+L   +    A++A+      + +  +   +GII QL +D   L  D   D+ KK
Sbjct: 149 GSLTAMSAVLAAMLANG--EFNQSIEDYAYKIGIIKQLENDYYGLVNDQRSDIRKK 202


>gi|58699201|ref|ZP_00374011.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
          ananassae]
 gi|58534279|gb|EAL58468.1| geranyltranstransferase [Wolbachia endosymbiont of Drosophila
          ananassae]
          Length = 69

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 23 LLLQTASHMQTQHNDRLLSAIRYALL-GGKKIRSFLVTECASLFNVNHLTALRVGAAIEC 81
          L+++    +     ++L+SA+RY LL   K IRSFLV   + +FN      + V AAIE 
Sbjct: 10 LIVEVNKLLPENSENKLISAMRYILLAPAKHIRSFLVVASSRVFNAEAKKVISVAAAIEF 69


>gi|332031509|gb|EGI70981.1| Decaprenyl-diphosphate synthase subunit 2 [Acromyrmex echinatior]
          Length = 393

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 7/154 (4%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +    E I   +LIH  L +++           +I +    A++ G+ LL+ +   I++
Sbjct: 139 ALAEITEMIRTSNLIHRGLVNINIDT--GSTELNNITFGNKIALLCGDYLLSTSCIEIAA 196

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGAL 188
            K Q    + S  +  L     +                D T        ++     G+L
Sbjct: 197 LKNQDLLLLISTAVRDLCQAEFVARRDNQNFPIPSIPPEDCTDYALKEWTLLNTYGAGSL 256

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +  +C+S   +A  S+  +E+   FG++L + +Q
Sbjct: 257 LGKSCQSTLKLAGHSKEIEEKGYEFGKHLALAWQ 290


>gi|320587299|gb|EFW99779.1| farnesyl-pyrophosphate synthetase [Grosmannia clavigera kw1407]
          Length = 399

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 13/174 (7%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA 127
                  +   +E +    L  DD+  +D    RRG+ + H Q     +  A        
Sbjct: 72  EVREVYVMAWVVELLQFAILASDDI--VDGDLWRRGRWSWHRQPGVGLS--AVYDTFVAT 127

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQ--------GMLGGQMLDIQDEFIDETQVFM 179
           F  ++  K  L        M+   +   L          M+  Q       F  E ++  
Sbjct: 128 FLALAFLKKHLDQKKAYIGMVESINREILYVQLYQSFDTMVANQGPGNVSTFC-EHKLRD 186

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           I     G            +   + +   + R   + + I +Q  +D +D   D
Sbjct: 187 ISLGLCGYFFLPFSLMLHYLGQGTPDNLRQTREITDEISIYYQAQNDYIDLYGD 240


>gi|167538193|ref|XP_001750762.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770786|gb|EDQ84467.1| predicted protein [Monosiga brevicollis MX1]
          Length = 2286

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 58/177 (32%), Gaps = 32/177 (18%)

Query: 67   VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT----------- 115
            V+    +   AA+E +H + LI DD+  MD    RR  PTV++  + V            
Sbjct: 1974 VDRDAVITTAAAVELLHLFMLIQDDV--MDASVRRRNCPTVNVALEHVRTKVLRGPSMYS 2031

Query: 116  --------AIIAGNGLLTYA---FEIISSPKTQLKDNIRSQLMLSLTHNIGLQ---GMLG 161
                    A++  + L   A   F  ++           SQ++  +           MLG
Sbjct: 2032 SKELSKSYAVVLSDCLHASANRLFMEVARELPTTSAAALSQVIEDVALTAASYQFEDMLG 2091

Query: 162  GQMLDIQDEFIDETQVFMIQKMKTGAL-MCFACESGAIMAHAS---QNEKERLRCFG 214
             +M   + +      V  I  + T  L        GA +              + FG
Sbjct: 2092 WRMHAWESDAAVVEAVESILHL-TAQLRFVLPLSVGAALTSQGTPHPQVIAAAQQFG 2147


>gi|269929308|ref|YP_003321629.1| Geranylgeranyl pyrophosphate synthase-like protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269788665|gb|ACZ40807.1| Geranylgeranyl pyrophosphate synthase-like protein [Sphaerobacter
           thermophilus DSM 20745]
          Length = 300

 Score = 52.9 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 61/178 (34%), Gaps = 11/178 (6%)

Query: 56  FLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT 115
            LV   +           RV AA+E     + + D++   D          V        
Sbjct: 51  MLVCAASRAAGGAQAATARVAAAVELFVAAADLFDEIEDGDAS-------AVVTASSLGQ 103

Query: 116 AIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--- 172
           A    + LL  A E ++          R            L+    GQ +D+  E +   
Sbjct: 104 AANVASALLMLAQECLARLGGTEIPAHRVPDFCRTLSQYALK-AAAGQHMDLASEGLASV 162

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           D  + F I + K G L   AC  GA+    +    +    FG +LG + QLA+D  D 
Sbjct: 163 DVNKAFEIARSKAGELGAVACRLGAMCGTENTELLDIYAEFGRHLGTMGQLANDAQDA 220


>gi|90080788|dbj|BAE89875.1| unnamed protein product [Macaca fascicularis]
          Length = 105

 Score = 52.9 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++        E    +G+N+GI FQL DD+LD   
Sbjct: 15  VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTS 49


>gi|148673065|gb|EDL05012.1| mCG2750, isoform CRA_a [Mus musculus]
          Length = 253

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 61/158 (38%), Gaps = 10/158 (6%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + +  +     +    E IH   L+H  + ++       G P   +Q+    AI++G+ L
Sbjct: 1   MVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDG-PLKDMQFGNKIAILSGDFL 59

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L  A   ++     L  N +   +LS      + G+        ++  I +       K 
Sbjct: 60  LANACNGLA-----LLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWKE 114

Query: 184 KT----GALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +T     AL+  +C++   +A      ++    +G+++
Sbjct: 115 QTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHM 152


>gi|119709580|dbj|BAF42686.1| geranylgeranyl diphosphate synthase-1-B-isoform [Nasutitermes
           takasagoensis]
 gi|119709584|dbj|BAF42688.1| geranylgeranyl diphosphate synthase-1-B-isoform [Nasutitermes
           takasagoensis]
          Length = 316

 Score = 52.5 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 13/195 (6%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +  +++L  + + L + GK+    L +       V       V       H   L+ DD+
Sbjct: 19  EQEEKILQPVAHTLQIPGKQHLVKLASAYNYWLKVPADKLTVVKDIEHAFHYSLLLIDDI 78

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   +   A   L+    +   S        +  + +L + +
Sbjct: 79  E--DNSVLRRGIPVAHSIYGVPSTTNASIYLMLKGVKRALSLNHPDAIALCIEQLLDMYY 136

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             GL+           +      +   + + K  +L+ F      +++  ++ +  +L  
Sbjct: 137 GQGLEI-----YWRENNTCPSFEEYKQLIQRKLASLL-FRVRLMQLVSD-NKTDFTKLNR 189

Query: 213 FGENLGIIFQLADDL 227
             +   + +Q+ DD 
Sbjct: 190 IMQ---LYWQIRDDY 201


>gi|119709578|dbj|BAF42685.1| geranylgeranyl diphosphate synthase-1-A-isoform [Nasutitermes
           takasagoensis]
 gi|119709586|dbj|BAF42690.1| geranylgeranyl diphosphate synthase-1-A-isoform [Nasutitermes
           takasagoensis]
          Length = 258

 Score = 52.5 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 13/195 (6%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +  +++L  + + L + GK+    L +       V       V       H   L+ DD+
Sbjct: 19  EQEEKILQPVAHTLQIPGKQHLVKLASAYNYWLKVPADKLTVVKDIEHAFHYSLLLIDDI 78

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   +   A   L+    +   S        +  + +L + +
Sbjct: 79  E--DNSVLRRGIPVAHSIYGVPSTTNASIYLMLKGVKRALSLNHPDAIALCIEQLLDMYY 136

Query: 153 NIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRC 212
             GL+           +      +   + + K  +L+ F      +++  ++ +  +L  
Sbjct: 137 GQGLEI-----YWRENNTCPSFEEYKQLIQRKLASLL-FRVRLMQLVSD-NKTDFTKLNR 189

Query: 213 FGENLGIIFQLADDL 227
             +   + +Q+ DD 
Sbjct: 190 IMQ---LYWQIRDDY 201


>gi|149922055|ref|ZP_01910496.1| hypothetical protein PPSIR1_24309 [Plesiocystis pacifica SIR-1]
 gi|149817107|gb|EDM76588.1| hypothetical protein PPSIR1_24309 [Plesiocystis pacifica SIR-1]
          Length = 324

 Score = 52.5 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 48/145 (33%), Gaps = 14/145 (9%)

Query: 88  IH--DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ 145
           IH  DDL   D     RG   +H       A     G    +   ++  +         Q
Sbjct: 69  IHLVDDLLDED----PRG---LHHPIGVGRAANLALGFSAASHRALAEAELPAGVEAELQ 121

Query: 146 LMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQN 205
             L     +        Q  D+     DE   + I  MKT  L   A   GA    A++ 
Sbjct: 122 GRL----AVMAMATAKAQAEDLASCA-DEEAYWRIVDMKTPPLFGCALALGARCGGATRE 176

Query: 206 EKERLRCFGENLGIIFQLADDLLDC 230
             + +   G  LG + Q+ DDL D 
Sbjct: 177 LADAIAELGLPLGRLIQIGDDLGDA 201


>gi|66529793|ref|XP_623861.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2-like [Apis
           mellifera]
          Length = 286

 Score = 52.1 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 59/156 (37%), Gaps = 9/156 (5%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +    E I    L+H  L ++ +           + +    A+++G+ LL  +   +++
Sbjct: 30  ALAEVTEMIRTSHLVHKGLVNIGSDVYFETSELNDMNFGNKIALLSGDYLLANSCAELAN 89

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML-------DIQDEFIDETQVFMIQKMKTG 186
            + Q    + S  +  L     +                + +D  + E  +  +     G
Sbjct: 90  LRNQDIVELMSSAVRDLAEAEFVGRRDNQNNPLPSIPPENCKDYAVKEWTLRNVLSA--G 147

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           AL+  +C+    +A  S   +E+   FG++L + +Q
Sbjct: 148 ALLGKSCKGTLKLAGHSNEIQEQGYNFGKHLALAWQ 183


>gi|156543975|ref|XP_001605067.1| PREDICTED: similar to candidate tumor suppressor protein [Nasonia
           vitripennis]
          Length = 394

 Score = 52.1 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 5/154 (3%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +    E I    L+H  L +M  G          + +    A+++G+ LL  +   +++
Sbjct: 138 ALAEVTEMIRTGHLVHKGLVNMQPGVYPEPAEMNDMTFGNKIALLSGDYLLGNSSAELAA 197

Query: 134 PKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV-----FMIQKMKTGAL 188
            + Q    + S  +  L     +                D T        +   +  GAL
Sbjct: 198 LRNQELVELMSSAIRDLAEAEFIGRRDSQNNPLPSVPPADRTDYAVNEWTLRNVLSAGAL 257

Query: 189 MCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +  +C+    +   S++ +E    FG++L + +Q
Sbjct: 258 LGKSCKGTLKLGGHSKDIQELGYNFGKHLALAWQ 291


>gi|194382874|dbj|BAG58993.1| unnamed protein product [Homo sapiens]
          Length = 153

 Score = 52.1 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           ++        E    +G+N+GI FQL DD+LD   
Sbjct: 18  VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTS 52


>gi|308174861|ref|YP_003921566.1| isoprenyl transferase [Bacillus amyloliquefaciens DSM 7]
 gi|307607725|emb|CBI44096.1| isoprenyl transferase (pre-ComX modification) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328554814|gb|AEB25306.1| isoprenyl transferase (pre-ComX modification) [Bacillus
           amyloliquefaciens TA208]
 gi|328913174|gb|AEB64770.1| isoprenyl transferase (pre-ComX modification) [Bacillus
           amyloliquefaciens LL3]
          Length = 291

 Score = 52.1 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 14/135 (10%)

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLD 166
             +Q D   ++ A   L + + + I   ++ +  +  +               + GQ  D
Sbjct: 89  AWMQTDHAISLNAATSLYSISLQAICELESNIDFSRLAIKYALNA--------MQGQHND 140

Query: 167 IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           +++    E +   + K K+G+L   +   GA++A  S      +  +   +G+I Q+ +D
Sbjct: 141 LRNFPETEEECLHMIKQKSGSLTAMSAVLGAMLA--SGEFNATIENYSYKIGVIKQIEND 198

Query: 227 LLDCE----EDLPKK 237
                     D+ KK
Sbjct: 199 YYGLFDKSRSDIKKK 213


>gi|73959937|ref|XP_854640.1| PREDICTED: similar to Farnesyl pyrophosphate synthetase (FPP
           synthetase) (FPS) (Farnesyl diphosphate synthetase)
           [Canis familiaris]
          Length = 259

 Score = 52.1 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 47/177 (26%), Gaps = 42/177 (23%)

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAII 118
                    +   AL VG  +E +  + L+ DD+  MD    R G+   +          
Sbjct: 22  VLEYKAVGGSLRRALSVGWCVELLQAFFLVSDDI--MDLTLTRWGQICWYQNPG------ 73

Query: 119 AGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVF 178
            G   +  A    S     LK  ++ +                                 
Sbjct: 74  IGLDAINDALLPESCIYRLLKSTVQVKR-------------------------------- 101

Query: 179 MIQKMKTG-ALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED 233
            + K KT          +   +A    + +    +     +G  FQ   D LD   D
Sbjct: 102 YVVKYKTAFYSFYLPVVATMYVAGIDGEKDHANAKKILLEMGEFFQFQADFLDLFGD 158


>gi|194376472|dbj|BAG62995.1| unnamed protein product [Homo sapiens]
          Length = 263

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 62/158 (39%), Gaps = 11/158 (6%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
           + +  +     +    E IH   L+H  + +++      G P   +Q+    AI++G+ L
Sbjct: 1   MVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDG-PLKDMQFGNKIAILSGDFL 59

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L  A   ++  +      + +  ++ L         +  +    ++ +I +       K 
Sbjct: 60  LANACNGLALLQNTKVVELLASALMDLVQG------VYHENSTSKESYITDDIGISTWKE 113

Query: 184 KT----GALMCFACESGAIMAHASQNEKERLRCFGENL 217
           +T    GAL+  +C++   +A      +     +G+++
Sbjct: 114 QTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHM 151


>gi|326200898|ref|ZP_08190770.1| hypothetical protein Cpap_3722 [Clostridium papyrosolvens DSM 2782]
 gi|325988466|gb|EGD49290.1| hypothetical protein Cpap_3722 [Clostridium papyrosolvens DSM 2782]
          Length = 343

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 7/157 (4%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS-PKT 136
           A + ++  + I DDL  +D   +R  +   ++ +     ++A N L+  A E+     K+
Sbjct: 88  AFDFLYNAAHIQDDL--IDESEVRESRKCTYLVFGRDYTLLASNILIFKAVELFLDFIKS 145

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
                 +S  ++   +   L      + +  + +  D      I + + G LM    E  
Sbjct: 146 TDLPKDKSLKLMGAFNYAYLISEGKSRDVASRGKVNDYDTYERIVRDQVGVLMRGIIELP 205

Query: 197 AIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I+  +   +E  +L      LG++  + DD LD   
Sbjct: 206 YIVTGSEFPDEVFKLSEI---LGLLAHILDDFLDVFG 239


>gi|212640623|ref|YP_002317143.1| Heptaprenyl diphosphate synthase related protein [Anoxybacillus
           flavithermus WK1]
 gi|212562103|gb|ACJ35158.1| Heptaprenyl diphosphate synthase related protein [Anoxybacillus
           flavithermus WK1]
          Length = 312

 Score = 51.7 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 22/163 (13%)

Query: 72  ALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +   AAIE +   + + DD+   +   I R   T+         +   N L   A  +I
Sbjct: 71  IIPYAAAIEFLILATDLFDDIADEETKNIMRENVTIGEI------VTIANALFVEAIHLI 124

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQVFMIQKMKTGA 187
           +        N+++++   +     L+    GQ  D+          E Q F +   K+ +
Sbjct: 125 A---LHTPRNLKTEICRMMKE---LKEACNGQWRDLHFTISSSIPTEKQYFQLISQKSSS 178

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
           L    C+ GA       +   +       +GI  QL +D  D 
Sbjct: 179 LTRLVCQLGA------GSLAYKWYDIATYIGISGQLRNDAKDI 215


>gi|222098585|ref|YP_002532643.1| comq [Bacillus cereus Q1]
 gi|221242644|gb|ACM15354.1| ComQ [Bacillus cereus Q1]
          Length = 309

 Score = 51.7 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 58/155 (37%), Gaps = 12/155 (7%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            IE +     I DD+   D             ++   T +    G L    + +      
Sbjct: 70  IIELLMLSLDIMDDIQDEDFLEGP------WTKHPIATNLNIIMGFLLICLQEVDKSSLS 123

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
               I+ +  L    +  +   + GQ LD+++E   E     +   K+G L+  AC  G 
Sbjct: 124 ----IQMKNWLKNEIHSCILNSINGQQLDLKNEIHSEKDYIDMVTHKSGYLIKLACLLG- 178

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
              + +  ++  +  +   +G+I Q+ +D+ D  +
Sbjct: 179 -TGNINPIQRSLIENYAICIGVINQIKNDMRDIMQ 212


>gi|289811565|ref|ZP_06542194.1| hypothetical protein Salmonellaentericaenterica_47552 [Salmonella
          enterica subsp. enterica serovar Typhi str. AG3]
          Length = 77

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 35 HNDRLLSAIRYALL--GGKKIRSFLVTECASLFNVNHLTALRVGAAIECIH 83
           + +L++ + Y ++  GGK+IR  +    A          + + A IE IH
Sbjct: 27 SDVQLINQLGYYIISGGGKRIRPMIAVLAARAVGYQGNAHVTIAALIEFIH 77


>gi|18307853|gb|AAL67715.1|AF456130_1 pre-ComX modifying enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 288

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 79/211 (37%), Gaps = 38/211 (18%)

Query: 21  DDLLLQTASHMQTQHNDRLLSA--IRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAA 78
           DDLL      +++++      +  + Y + GGK                    A+ +GA 
Sbjct: 12  DDLLKLLNLFIESRNFFPFAESAFLHYCVFGGK----------------EFEIAIELGAG 55

Query: 79  IECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII--SSPKT 136
           IE I   S I DD+   DN           +  D+  A+ +     T   + +    PK+
Sbjct: 56  IEIITLSSDILDDIQDNDN------LTAPWMNIDQSVALSSVFTSYTVGLQSLKAVDPKS 109

Query: 137 QLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESG 196
            + ++I    + ++           GQ  DI ++   E       K+K G+L   A  SG
Sbjct: 110 DIVNSILKYCLDAM----------QGQHRDIINKPQTEEDCLEAMKLKCGSLFALANVSG 159

Query: 197 AIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            ++A  + N+      + +  GI  Q+  D 
Sbjct: 160 TMLATGTYNKVVESYSYSK--GICEQIYGDY 188


>gi|239609673|gb|EEQ86660.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis
           ER-3]
          Length = 702

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 14/150 (9%)

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+   D    RRG P  +I Y     + +   +    FE+++  K          +
Sbjct: 457 LMVDDVQ--DGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLKFADACR---DI 511

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHA 202
           ++    ++GL     GQ L++   F       +  F++   K+G+         +  +  
Sbjct: 512 LIDELKSLGL-----GQSLELHWRFHKLCPPISDYFVMVDNKSGSFFQLVMRLMSAESGN 566

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 +L  F   LG  +Q+ +D  + E 
Sbjct: 567 PAAPDTKLSHFINLLGRYYQIWNDYQNLES 596


>gi|329133295|gb|AEB78588.1| geranylgeranyl diphosphate synthase 1 [Tursiops truncatus]
          Length = 119

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 15/129 (11%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I + N +     E + +        + ++ +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINSANYVHFLDLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL-G 218
                 +D +    E +   +   KTG L   A     + +   ++ K  L     N  G
Sbjct: 56  --DTYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL-----NTPG 108

Query: 219 IIFQLADDL 227
           + FQ+ DD 
Sbjct: 109 LFFQIRDDY 117


>gi|121308574|dbj|BAF43673.1| geranyltranstransferase [Vibrio fischeri]
          Length = 106

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 194 ESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           + GA+ A    +    +L  + + +G+ FQ+ DD+LD   D  
Sbjct: 1   QLGALCAGDKGKAILPQLEVYADAIGLAFQVQDDILDIISDTE 43


>gi|313619071|gb|EFR90878.1| geranyltranstransferase [Listeria innocua FSL S4-378]
          Length = 94

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            + +RLR F EN+GI FQ++DD+LD   D  K
Sbjct: 1   EQTKRLRIFAENIGIGFQISDDILDVIGDETK 32


>gi|327356194|gb|EGE85051.1| hypothetical protein BDDG_07996 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 702

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 14/150 (9%)

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+   D    RRG P  +I Y     + +   +    FE+++  K          +
Sbjct: 457 LMVDDVQ--DGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLKFADACR---DI 511

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHA 202
           ++    ++GL     GQ L++   F       +  F++   K+G+         +  +  
Sbjct: 512 LIDELKSLGL-----GQSLELHWRFHKLCPPISDYFVMVDNKSGSFFQLVMRLMSAESGN 566

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 +L  F   LG  +Q+ +D  + E 
Sbjct: 567 PAAPDTKLSHFINLLGRYYQIWNDYQNLES 596


>gi|18307869|gb|AAL67727.1|AF456134_1 pre-ComX modifying enzyme [Bacillus mojavensis]
          Length = 301

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A ++GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLKVATKLGAGIEILILSSDIMDDLEDEDN------HQALWMKMNRSESLNAALFL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L    +        GQ  DI ++   E +   + ++
Sbjct: 95  YTIG---LTSIHSMDINPLIFKYVLKYVKDAM-----QGQHDDITNKSKTEDECLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G I+A  +    E +  +    GI+ Q++ D 
Sbjct: 147 KCGSLIALANVTGVILA--TGEYNEIVERYSYYKGIVAQISGDY 188


>gi|94469541|gb|ABF20220.1| multi-functional prenyl transferase [Neotyphodium lolii]
          Length = 788

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 10/152 (6%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-VTAIIAGNGLLTYAFEIISSPKTQLKD 140
           +H  +++ DD+ +     +RR +P  H+ + E  TA  A   LL      +        +
Sbjct: 50  VHFSAILIDDIAN--QSALRRNQPAAHVVFGETETATRAYLVLLRVVNRTMRENPVLAGE 107

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + S   +    +  L     G       +         + ++KTG+L       G ++A
Sbjct: 108 LLNSLEEIHQGQDESLVWRRDGLETFPVADDERLAAYVRMSRLKTGSLF---VLLGRLLA 164

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           +      + L  FG       QL  D  +   
Sbjct: 165 NGGTEFDDLLVRFGLYA----QLQHDCKNIYS 192


>gi|110769981|ref|XP_001122575.1| PREDICTED: farnesyl pyrophosphate synthase-like, partial [Apis
           mellifera]
          Length = 309

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 65/213 (30%), Gaps = 26/213 (12%)

Query: 43  IRYALLGGKKIRSFLVTECASLF-------NVNHLTALRVGAAIECIHCYSLIHDDLPSM 95
           + Y +  G+K RS  +     L          N   A  +   IE +H   ++ +D+  +
Sbjct: 2   LEYNVPKGEKWRSVSLIVAYKLLASQDQLTKENIRLARILAWCIEIMHAVHIVMNDI--V 59

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D+  +RR +PT H++     AI     + T   +++          +    +    +   
Sbjct: 60  DHADMRRNQPTWHVKVGLG-AINDALIMETCIQKLLEKHFKLKNCYVELMNIFWKYNKKT 118

Query: 156 LQG------MLGGQMLDIQDEFIDETQVFMIQKMKTGAL-----MCFACESGAIMAHASQ 204
             G      +          +     +   + K K   L       F      ++     
Sbjct: 119 GHGHRLDIFISTNWRKKANFDLFSMDRYNTLVKYKMSYLSFIFPFSFTMRFAGVI---DS 175

Query: 205 NEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
                       +   +Q+ +D L+      KK
Sbjct: 176 EMHREAEKILLKICHFYQVQNDFLNYYS--KKK 206


>gi|271966483|ref|YP_003340679.1| dehydrogenase (flavoprotein)-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270509658|gb|ACZ87936.1| Dehydrogenase (flavoprotein)-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 671

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 24/172 (13%)

Query: 52  KIRSFLVTECASLFNVNHLTAL--RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI 109
           ++R       A L   N        + AAIE     +L      +       R  P   +
Sbjct: 416 RLRPAAPFFAALLAGGNPPDPAFATLAAAIELATLGAL------AFLGPMPPRAAPGRRV 469

Query: 110 QYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
            +   + ++AG+ LL  A  ++++   ++          S    +G    L    +D   
Sbjct: 470 DWAVASTVLAGDFLLAQASRLVAASAPEVS--------WSFADWLGELAALRAVRIDPAG 521

Query: 170 EFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIF 221
                            +L+ F    GA +  AS      LR FG + G  F
Sbjct: 522 RSRAGEVF--------ASLLEFPSRIGAQLGGASPETVRALRDFGNHSGHAF 565


>gi|325289826|ref|YP_004266007.1| hypothetical protein Sgly_1709 [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965227|gb|ADY56006.1| hypothetical protein Sgly_1709 [Syntrophobotulus glycolicus DSM
           8271]
          Length = 244

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 18/168 (10%)

Query: 53  IRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYD 112
           +   +V           L  L + +  + I     IH  +   D     R  P       
Sbjct: 44  LCPAVVFAVTRALQKEELKMLSLASLFQYIFLADKIHRLVTDGDLPEQARQYP------- 96

Query: 113 EVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
               I+ G+ L    F  +      L   +R    L  T N G+          ++++ +
Sbjct: 97  ----ILVGDYLFGQTFLKLCE--KDLHPYLREFTGLIETMNEGVI-----HRWSLKEKQM 145

Query: 173 DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
              +   I   +  ++   A    A +  A ++ K++L  FG ++G+ 
Sbjct: 146 TLEEYKHILSKERASVTKLAAGITAELNGAEESVKDQLESFGYHIGMA 193


>gi|119490120|ref|XP_001262975.1| polyprenyl synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119411135|gb|EAW21078.1| polyprenyl synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 668

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 51  KKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQ 110
           K  R  L+    + FNV   + + +      +H  SL+ DD+   D   +RRGKP VH  
Sbjct: 401 KGFRHHLIDALQTWFNVPERSLMLISGVASLLHEASLMLDDIQ--DGSLLRRGKPAVHKI 458

Query: 111 YDEVTAIIAGNGLLTYAFEIISSPKTQL 138
           +     I +    +  A  ++       
Sbjct: 459 FGVGQTINSACFHINNALRLVQQLSPSA 486


>gi|221311114|ref|ZP_03592961.1| transcriptional regulator [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315441|ref|ZP_03597246.1| transcriptional regulator [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221320357|ref|ZP_03601651.1| transcriptional regulator [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324641|ref|ZP_03605935.1| transcriptional regulator [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767725|ref|NP_391049.2| isoprenyl transferase [Bacillus subtilis subsp. subtilis str. 168]
 gi|251757254|sp|P33690|COMQ_BACSU RecName: Full=Competence regulatory protein ComQ
 gi|157418926|gb|ABV55168.1| quorum-sensing protein [Bacillus subtilis]
 gi|225185353|emb|CAB15159.2| isoprenyl transferase (pre-ComX modification) [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 299

 Score = 50.2 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|142714|gb|AAA22323.1| competence regulation [Bacillus subtilis]
 gi|1934770|emb|CAB07902.1| comQ [Bacillus subtilis subsp. subtilis str. 168]
          Length = 299

 Score = 50.2 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|215480237|gb|ACJ67463.1| quorum sensing protein [Bacillus subtilis]
          Length = 266

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|77998089|gb|ABB16424.1| ComQ [Bacillus mojavensis]
 gi|79085236|gb|ABB51999.1| ComQ [Bacillus mojavensis]
          Length = 280

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 10/120 (8%)

Query: 108 HIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI 167
            ++ D+  ++ A   L + + ++I   KT       +               + GQ  D+
Sbjct: 79  WMKIDQSISLNAATSLYSMSLQVICELKTNSDFPRLAMKYALNA--------MQGQHNDL 130

Query: 168 QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
            +    E +   + K K+G+L   +   GA++A+   NE   +  +   +GI+ Q+ +D 
Sbjct: 131 ANFPETEDECLQMIKQKSGSLTAMSAVLGAMLANGEFNEV--IENYSYKIGIVKQIENDY 188


>gi|215480205|gb|ACJ67447.1| quorum sensing protein [Bacillus subtilis]
          Length = 267

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|215480225|gb|ACJ67457.1| quorum sensing protein [Bacillus subtilis]
 gi|215480269|gb|ACJ67479.1| quorum sensing protein [Bacillus subtilis]
          Length = 272

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|215480209|gb|ACJ67449.1| quorum sensing protein [Bacillus subtilis]
 gi|215480221|gb|ACJ67455.1| quorum sensing protein [Bacillus subtilis]
          Length = 269

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|215480213|gb|ACJ67451.1| quorum sensing protein [Bacillus subtilis]
 gi|215480243|gb|ACJ67466.1| quorum sensing protein [Bacillus subtilis]
          Length = 270

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|215480207|gb|ACJ67448.1| quorum sensing protein [Bacillus subtilis]
          Length = 260

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|215480235|gb|ACJ67462.1| quorum sensing protein [Bacillus subtilis]
          Length = 263

 Score = 49.8 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|294945067|ref|XP_002784549.1| prenyl transferase, putative [Perkinsus marinus ATCC 50983]
 gi|239897625|gb|EER16345.1| prenyl transferase, putative [Perkinsus marinus ATCC 50983]
          Length = 146

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 194 ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
           E  AI+A            FG + G+ FQ+ DD+LD E D+ 
Sbjct: 2   ECVAILADLPPALVSACYLFGVHFGLEFQIRDDMLDVEMDVE 43


>gi|215480259|gb|ACJ67474.1| quorum sensing protein [Bacillus subtilis]
          Length = 261

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|255732615|ref|XP_002551231.1| hypothetical protein CTRG_05529 [Candida tropicalis MYA-3404]
 gi|240131517|gb|EER31077.1| hypothetical protein CTRG_05529 [Candida tropicalis MYA-3404]
          Length = 191

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
                + K KTG+L   A +  ++ A    N++  L      LGII+Q+ DD L+ 
Sbjct: 28  EDYLGMVKDKTGSLFRLAIKLLSLHAGVGDNDE--LVAIANLLGIIYQVRDDYLNL 81


>gi|156538763|ref|XP_001607890.1| PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis]
          Length = 533

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 7/137 (5%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            +H Y +I+DDL  +DN  +RRG P VH  Y     II   GL     + + + K     
Sbjct: 133 LMHDYVMIYDDL--LDNTELRRGIPAVHRVYGSNRTIIVCEGLAFIMLQKVIAMKNAEAL 190

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            + S+ M+         G           +     +   I ++K  AL     +     +
Sbjct: 191 QVYSEGMIRYHK-----GEAFENYYRFNFKVPTVDEYMHIVEIKLTALYYTVVQLMQAFS 245

Query: 201 HASQNEKERLRCFGENL 217
               + +   + FG  L
Sbjct: 246 SNKTDFRPFTQAFGYYL 262


>gi|261196876|ref|XP_002624841.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis
           SLH14081]
 gi|239596086|gb|EEQ78667.1| geranylgeranyl pyrophosphate synthase [Ajellomyces dermatitidis
           SLH14081]
          Length = 702

 Score = 49.0 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 14/150 (9%)

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+   D    RRG P  +I Y     + +   +    FE+++  K          +
Sbjct: 457 LMVDDVQ--DGSQTRRGMPAAYILYGTNQTMNSATYVWVKIFELMAQLKFADACR---DI 511

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDE----TQVFMIQKMKTGALMCFACESGAIMAHA 202
           ++    ++GL     GQ L++   F       +  F++   K+G+         +  +  
Sbjct: 512 LIDELKSLGL-----GQSLELHWRFHKLCPPISDYFVMVDNKSGSFFQLVMRLMSAESEN 566

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                 +L  F   LG  +Q+ +D  + E 
Sbjct: 567 PAAPDTKLSHFINLLGRYYQIWNDYQNLES 596


>gi|2735723|gb|AAB93984.1| farnesyl pyrophosphate synthase [Parthenium argentatum]
          Length = 105

 Score = 49.0 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 12/89 (13%)

Query: 160 LGGQMLDIQDEFIDETQV--------FMIQKMKTGAL-MCFACESGAIMAHASQNEKERL 210
             GQM+D+    + E  +          I + KT             +MA  S +    +
Sbjct: 9   ASGQMIDLITTLVGEKDLSKYLLPIHRRIVQYKTAYYSFYLPVACALLMAGESLDNHVNV 68

Query: 211 RCFGENLGIIFQLADDLLDCEED---LPK 236
           +     +GI FQ+ DD LDC  D   L K
Sbjct: 69  KNILIEMGIYFQVQDDYLDCFADPEVLGK 97


>gi|153840450|ref|ZP_01993117.1| geranyltranstransferase [Vibrio parahaemolyticus AQ3810]
 gi|149745889|gb|EDM57019.1| geranyltranstransferase [Vibrio parahaemolyticus AQ3810]
          Length = 89

 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
           L  + + +G+ FQ+ DD+LD   D  
Sbjct: 1   LERYSKAIGLAFQVQDDILDIISDTE 26


>gi|4115416|dbj|BAA36347.1| farnesyl diphosphate synthase [Oryza sativa Japonica Group]
          Length = 186

 Score = 49.0 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 14/65 (21%)

Query: 179 MIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGE------NLGIIFQLADDLLDCE 231
            I + KT             +++       E L  +G        +GI FQ+ DD LDC 
Sbjct: 29  RIVQYKTSYYSFYLPVACALLLSG------EDLTKYGAVEDILVKMGIYFQVQDDYLDCY 82

Query: 232 EDLPK 236
            D PK
Sbjct: 83  GD-PK 86


>gi|215480275|gb|ACJ67482.1| quorum sensing protein [Bacillus subtilis]
          Length = 260

 Score = 48.6 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLNVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|215480277|gb|ACJ67483.1| quorum sensing protein [Bacillus subtilis]
          Length = 262

 Score = 48.6 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 16/164 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A R+GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLNVATRLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNNNPLIFKYVLKYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
           K G+L+  A  +G ++A  +    E +  +    GII Q++ D 
Sbjct: 147 KCGSLIALANVAGVLLA--TGEYNETVERYSYYKGIIAQISGDY 188


>gi|307173809|gb|EFN64587.1| Decaprenyl-diphosphate synthase subunit 2 [Camponotus floridanus]
          Length = 350

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 58/156 (37%), Gaps = 7/156 (4%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMD--NGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
            +    E I   +LIH  L +++             ++ +    A++ G+ LL+ +   +
Sbjct: 92  ALAEVTEMIRISNLIHRGLVNINTNEALSVESSELNNMTFGNKIALLCGDYLLSNSCAEL 151

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQK-----MKTG 186
           +S + Q    + S  +  L     +                + T   + +         G
Sbjct: 152 ASLRNQDLVFLISSAVKDLCQAEFVACRDNQNFPIPSIPPENRTGYALKEWTLLNVYGAG 211

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
           +L+  +CE+   +A  S+  +     FG++L + +Q
Sbjct: 212 SLLGKSCEATLQLAGHSKEIQTEGYKFGKHLALAWQ 247


>gi|322793602|gb|EFZ17061.1| hypothetical protein SINV_02858 [Solenopsis invicta]
          Length = 343

 Score = 48.2 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 27/186 (14%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVT---AIIAGNGLL 124
           N   A  +    E +    LI DD+  MD   IRRGK T   ++D+ T   AI     L 
Sbjct: 81  NIHLARILAWCTEVVRYLILI-DDI--MDQSSIRRGK-TCWYRHDDTTDLMAINDATMLE 136

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE---TQVFMIQ 181
           +  + ++           R +   ++  +     +  GQ  D++   +DE    +  +  
Sbjct: 137 SIGYYLLQKYFK------RKECYNNIAESFQDVCISRGQFFDMKKCNLDEFTMDRYVITV 190

Query: 182 KMKTGALMCFACESGAIMAHASQNEKERLRC---FGENLGIIFQLADDLL----DCEE-- 232
           + K+G L         I    ++   E L+        +G  +Q+ DD L    D     
Sbjct: 191 QNKSGQLAFLMPARAGIHYATTEKNGEMLKQTESILLEMGQFYQIQDDCLICFFDVLGKD 250

Query: 233 --DLPK 236
             D+ K
Sbjct: 251 FNDIAK 256


>gi|215480211|gb|ACJ67450.1| quorum sensing protein [Bacillus subtilis]
          Length = 270

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 15/151 (9%)

Query: 64  LFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
               N   A  +GA IE +   S I DDL   DN         + ++ +   ++ A   L
Sbjct: 41  FGGENLDVATWLGAGIEILILSSDIMDDLEDEDN------HHALWMKINRSESLNAALSL 94

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
            T     ++S  +   + +  + +L   +         GQ  DI ++   E +   + ++
Sbjct: 95  YTVG---LTSIYSLNINPLIFKYVLRYVNEAM-----QGQHDDITNKSKTEDESLEVIRL 146

Query: 184 KTGALMCFACESGAIMA-HASQNEKERLRCF 213
           K G+L+  A  +G ++A        ER   +
Sbjct: 147 KCGSLIALANVAGVLLATGEYNETVERYSYY 177


>gi|2735585|gb|AAB93951.1| farnesylpyrophosphate synthase [Nicotiana tabacum]
          Length = 138

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 14/139 (10%)

Query: 84  CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIR 143
            + L+ DD+  MD  + RRG+P           I A +G+L     I    K   +    
Sbjct: 1   AFFLVLDDI--MDGSHTRRGQPCWFRLPKVGM-IAANDGILLRN-HIPRILKNHFRGKPY 56

Query: 144 SQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGAL-MCFACE 194
              +L L + +       GQM+D+    + E  +          I + KT          
Sbjct: 57  YVDLLELFNEVE-FQTASGQMIDLITTLVGEKDLSKYLLPIHRRIVQYKTAYYSFYLPVA 115

Query: 195 SGAIMAHASQNEKERLRCF 213
              +MA  S +    +R +
Sbjct: 116 CALLMAGESLDNHVNVRTY 134


>gi|296387400|ref|ZP_06876899.1| geranyltranstransferase [Pseudomonas aeruginosa PAb1]
          Length = 87

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 212 CFGENLGIIFQLADDLLDCEEDLP 235
            + E +G+ FQ+ DD+LD E D  
Sbjct: 1   RYAEAIGLAFQVQDDILDVESDTA 24


>gi|294509068|ref|YP_003565957.1| hypothetical protein BMQ_pBM70154 [Bacillus megaterium QM B1551]
 gi|294352372|gb|ADE72694.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 320

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 17/162 (10%)

Query: 76  GAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPK 135
              IECI   + I DD+  +D+  +    PT   Q ++   I+    LL   F  +    
Sbjct: 75  AFGIECIFLSADIVDDICDLDDPNL----PTF--QNEDRYLILISQYLLAKGFFYLRPVS 128

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES 195
              +DN    L++      G    L  +    +     E + F + K K+G L       
Sbjct: 129 DSYEDNCLFSLIMD--SGCGEWKDLHFRFSINKRVIPTEEEYFKLIKQKSGKLTE----- 181

Query: 196 GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPKK 237
             I++ A    +  L+     +GI  QL +D  D   D  KK
Sbjct: 182 --IISQAIDPSQLILKKITYYIGIAGQLRNDAADVLND--KK 219


>gi|169842470|ref|ZP_02875575.1| hypothetical protein cdivTM_35209 [candidate division TM7
           single-cell isolate TM7a]
          Length = 44

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 208 ERLRCFGENLGIIFQLADDLLDCEEDLP 235
           +++  + + LGI FQ+ DD+LD E +  
Sbjct: 6   QKMVEYSKLLGIAFQIKDDILDIEGNFE 33


>gi|299538176|ref|ZP_07051461.1| ComQ [Lysinibacillus fusiformis ZC1]
 gi|298726378|gb|EFI66968.1| ComQ [Lysinibacillus fusiformis ZC1]
          Length = 309

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 12/153 (7%)

Query: 78  AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQ 137
            +E I   + I DD+   DN       P     +         N LL Y F  +      
Sbjct: 70  IVELILLSADILDDIQ--DNDA-----PCNP--WSNKPLSYNLNILLGYLFIALQRIH-Y 119

Query: 138 LKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGA 197
           +  +   +   ++     +   + GQ  D+ ++ I E + F +  +K+G+L+  A   GA
Sbjct: 120 INCSSDVKKFFNIFIYPLMLDAINGQHTDLINDTITEQEYFDMTALKSGSLILLANLLGA 179

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC 230
              +   +  E+++ +   LG+I Q+ +D+ D 
Sbjct: 180 --GNVCPSTFEKIKEYSYYLGVIAQIRNDVNDL 210


>gi|154320702|ref|XP_001559667.1| hypothetical protein BC1G_01823 [Botryotinia fuckeliana B05.10]
 gi|150853512|gb|EDN28704.1| hypothetical protein BC1G_01823 [Botryotinia fuckeliana B05.10]
          Length = 265

 Score = 47.5 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 18/155 (11%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH  +++ DD+   DN ++R+G+   H  Y     I   N      FE+I   ++     
Sbjct: 4   IHFGAILVDDVA--DNSHLRKGRIAAHRIYGTAETI---NRAYLRIFEVIEKCRSAKPSA 58

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID----ETQVFMIQKMKTGALMCFACESGA 197
           I + ++ +LT     Q        D  D+ +D     T+      +KTGAL         
Sbjct: 59  IPA-ILDNLTQIHKGQDESLVWRRDGFDKGLDRAAALTRYRECASLKTGALF----RLIG 113

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            +A  S  + + +  FG       QL +D  +   
Sbjct: 114 QLATGSHEKDQLMSDFGWYC----QLQNDCKNVFS 144


>gi|295400761|ref|ZP_06810738.1| heptaprenyl diphosphate synthase related protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977342|gb|EFG52943.1| heptaprenyl diphosphate synthase related protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 316

 Score = 47.5 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 22/168 (13%)

Query: 70  LTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFE 129
            + +   AAIE +   + I D++   D       + ++        AI+        AF 
Sbjct: 70  QSVIAHAAAIELLILATDIFDEISDHDQSDEIISQLSIGETVTIANAIM------MEAFR 123

Query: 130 IISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMKT 185
           +I            + ++  L +         GQ  D+     +    E + F + + K+
Sbjct: 124 LILHNSKTDVYEKFAIIIHELQNA------CNGQWRDLHFVISEHVPTEEEYFHLIQQKS 177

Query: 186 GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            +L+   CE       +  + +        ++GI  QL +D  D   D
Sbjct: 178 SSLVKLVCEL------SDIHNQNIWGPIATDIGIAGQLKNDAKDILSD 219


>gi|297192087|ref|ZP_06909485.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197723242|gb|EDY67150.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 359

 Score = 47.5 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 22/223 (9%)

Query: 10  QENSKRIDTILDDLLLQTASH---MQTQHNDRL-LSAIRYALLGGKKIRSFLVTECASLF 65
           Q+ +  ID  ++  L         ++T     L     RY L         L        
Sbjct: 47  QKFAADIDAEVESALESLGPSSGGLRTAVAGLLRHQTFRYPLS-------VLPLLVYGAE 99

Query: 66  NVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLT 125
             N   A+ + A  +     +   DD+          G  ++ +    + A  A    + 
Sbjct: 100 TGNPAPAVPLAAVHDLWWTSACYLDDIAD--------GNTSI-VAGGALGASEALLASVV 150

Query: 126 YAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE--FIDETQVFMIQKM 183
               +       L      +  L+            GQ+ D+  +        V  I + 
Sbjct: 151 TGHVLPLRVLRSLPVPEPVRGALTDEALRCAAAAAEGQLADLGADAGRTTRAAVAEIYRG 210

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADD 226
           K+ A         A ++ A     +R R FG   GI++Q+ +D
Sbjct: 211 KSSAPFAMITAMAATLSGADAERVDRWREFGSVFGILWQIFND 253


>gi|95107368|gb|AAP34308.2| farnesyl diphosphate synthase inactive form [Toxoplasma gondii]
          Length = 605

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 8/98 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEII 131
            +G  +E +    L+ DD+  MD+   RRGK   +       +    + L+  A  + ++
Sbjct: 315 ALGWCVELLQSCFLVMDDV--MDHSLTRRGKQCWYRCDGIGVSNAVNDSLVLEAAVYRVL 372

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                     ++ Q +L           L GQ LD +D
Sbjct: 373 REYLGDHPAYVQLQDLLLGN----TFTTLIGQHLDSED 406



 Score = 43.6 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 3/59 (5%)

Query: 180 IQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + ++KT           G             + +     +G  FQ+ DD LDC  D PK
Sbjct: 491 VARLKTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSD-PK 548


>gi|296198927|ref|XP_002747056.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 2
           [Callithrix jacchus]
          Length = 298

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 41/117 (35%), Gaps = 16/117 (13%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   A                 +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSGNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNINE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNI 154
                G P   +Q+    AI++G+ LL  A   ++  +      + +  ++ L   +
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGV 226


>gi|119709590|dbj|BAF42692.1| geranylgeranyl diphosphate synthase-2-B-isoform [Nasutitermes
           takasagoensis]
          Length = 316

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 20/151 (13%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH   ++ DD+   DN  +RRG P  H  Y   + +     LL    +           
Sbjct: 67  IIHHSCVLIDDIQ--DNTLLRRGIPVAHSIYGVASTLNTAIYLLLKGLKRAQILNNPDAI 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            +  + +L + +  GL        +  +D        +   + + K      +  + G +
Sbjct: 125 ALCIEHLLDMYYGQGL-------DICWRDNNTCPSLEEYMQMIQKKAA---VWLFKIGLL 174

Query: 199 -MAHASQNEKERLRCF-GENLGIIFQLADDL 227
            +   ++ +  +L       +    Q+ DD 
Sbjct: 175 QLLSDNKIDFTKLNSILAMYI----QIRDDY 201


>gi|302809182|ref|XP_002986284.1| hypothetical protein SELMODRAFT_425252 [Selaginella moellendorffii]
 gi|300145820|gb|EFJ12493.1| hypothetical protein SELMODRAFT_425252 [Selaginella moellendorffii]
          Length = 267

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 80  ECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLK 139
           E      L  DDLP MDN   R+G+   H+++D+ TAI+A   L   AF  +      L 
Sbjct: 143 EMWMAIILTTDDLPCMDNARTRKGRAAAHVEFDDTTAILAAQALAALAFGRVVDSTLVLA 202

Query: 140 DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACE 194
           D    +L L    ++ +Q ++ GQ  D++   +  T+    Q+ + G L+  A  
Sbjct: 203 DK---RLRLVKKFSLSMQRLVYGQYDDVKKGEVGNTRGTQRQEHQQGELLLRAAA 254


>gi|221486332|gb|EEE24593.1| farnesyl pyrophosphate synthetase, putative [Toxoplasma gondii GT1]
          Length = 646

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 8/98 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEII 131
            +G  +E +    L+ DD+  MD+   RRGK   +       +    + L+  A  + ++
Sbjct: 315 ALGWCVELLQSCFLVMDDV--MDHSLTRRGKQCWYRCDGIGVSNAVNDSLVLEAAVYRVL 372

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                     ++ Q +L           L GQ LD +D
Sbjct: 373 REYLGDHPAYVQLQDLLLGN----TFTTLIGQHLDSED 406



 Score = 43.6 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 3/59 (5%)

Query: 180 IQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + ++KT           G             + +     +G  FQ+ DD LDC  D PK
Sbjct: 491 VARLKTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSD-PK 548


>gi|108745448|gb|ABG02859.1| farnesyl diphosphate synthase [Toxoplasma gondii]
          Length = 646

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 8/98 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEII 131
            +G  +E +    L+ DD+  MD+   RRGK   +       +    + L+  A  + ++
Sbjct: 315 ALGWCVELLQSCFLVMDDV--MDHSLTRRGKQCWYRCDGIGVSNAVNDSLVLEAAVYRVL 372

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                     ++ Q +L           L GQ LD +D
Sbjct: 373 REYLGDHPAYVQLQDLLLGN----TFTTLIGQHLDSED 406



 Score = 43.6 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 3/59 (5%)

Query: 180 IQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + ++KT           G             + +     +G  FQ+ DD LDC  D PK
Sbjct: 491 VARLKTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSD-PK 548


>gi|83590129|ref|YP_430138.1| hypothetical protein Moth_1281 [Moorella thermoacetica ATCC 39073]
 gi|83573043|gb|ABC19595.1| hypothetical protein Moth_1281 [Moorella thermoacetica ATCC 39073]
          Length = 234

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 42/164 (25%), Gaps = 23/164 (14%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             LV   A         AL + A  + I   SLIH                   +     
Sbjct: 47  PALVLLSAHGQGYFGPRALSLAAVFQLIFMASLIH-----------------SRVNQGVA 89

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
              + G+   T  F+++            S+L+  L  +             +      E
Sbjct: 90  MQTLMGDYFYTRFFDLLCRDGNLEFLEPLSRLICHLHLDAARHQEEAAAGPVVCGGAYPE 149

Query: 175 TQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
                +      +L   A   G+ +      E    +  G  LG
Sbjct: 150 KDSGRV------SLATEASRLGSQLGKTGPRETRTWQEIGLMLG 187


>gi|119709588|dbj|BAF42691.1| geranylgeranyl diphosphate synthase-2-A-isoform [Nasutitermes
           takasagoensis]
          Length = 258

 Score = 46.7 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 20/151 (13%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKD 140
            IH   ++ DD+   DN  +RRG P  H  Y   + +     LL    +           
Sbjct: 67  IIHHSCVLIDDIQ--DNTLLRRGIPVAHSIYGVASTLNTAIYLLLKGLKRAQILNNPDAI 124

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAI 198
            +  + +L + +  GL        +  +D        +   + + K      +  + G +
Sbjct: 125 ALCIEHLLDMYYGQGL-------DICWRDNNTCPSLEEYMQMIQKKAA---VWLFKIGLL 174

Query: 199 -MAHASQNEKERLRCF-GENLGIIFQLADDL 227
            +   ++ +  +L       +    Q+ DD 
Sbjct: 175 QLLSDNKIDFTKLNSILAMYI----QIRDDY 201


>gi|158295164|ref|XP_316048.4| AGAP006015-PA [Anopheles gambiae str. PEST]
 gi|157015903|gb|EAA11709.4| AGAP006015-PA [Anopheles gambiae str. PEST]
          Length = 457

 Score = 46.7 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 62/264 (23%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++     N  LL   +  +  GK        +V   +           
Sbjct: 89  LLSDEIANVALHLRKLVGSNHPLLRTAKMLIFNGKNNMQAWGLIVLLVSKAVGHAPTVPD 148

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTA 116
                      +   +    E I    L+H    +L S+D      G  +    +    A
Sbjct: 149 LEQDKSAGVLQSQRGLAEITEMIRTAQLVHQGLVNLQSLDEAGNELGSDS-DTIFGNKIA 207

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN-----------------IGLQGM 159
           +++G+ LL  A   ++  + Q    + S  +  L  +                 +   GM
Sbjct: 208 LLSGDYLLGNACLQLAGLRNQPLIELISSAVRDLAESNFIGERDQQNNPLPSCPLDCPGM 267

Query: 160 LGGQMLDIQDEFI---------------------DETQVFMIQKMKTGALMCFACESGAI 198
             G   D + E                        E +  +   +  G+L+  +C+   +
Sbjct: 268 AAG-GRDSEPEGAVNFGDLVNNTQPLSLEGVMGNPEREWALRHILGAGSLLGKSCQGAMM 326

Query: 199 MAHASQNEKERLRCFGENLGIIFQ 222
           +A  S+  + R   FG++L + +Q
Sbjct: 327 LAEQSEALQRRGYMFGKHLSLAWQ 350


>gi|170027728|ref|XP_001841749.1| farnesyl pyrophosphate synthetase [Culex quinquefasciatus]
 gi|167862319|gb|EDS25702.1| farnesyl pyrophosphate synthetase [Culex quinquefasciatus]
          Length = 297

 Score = 46.7 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 5/150 (3%)

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLM 147
           I DD+  +DN   R GKP  H + D   + +    L+  +   +    T+   +I   ++
Sbjct: 103 IFDDI--VDNSKTRYGKPCWHRRSDVGLSAVFDGLLIDKSIHYL--MNTKFNRDIIDAVL 158

Query: 148 LSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQ-NE 206
             L      Q ++         E         +  +    ++      G  +A  +  N 
Sbjct: 159 EKLFFLDAGQTLIDTLSKVGDFENYSRASYEQVANLLDSCIITLPIRMGMNLAGITDLNA 218

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            ++++     + +++Q+ +D  D   D  +
Sbjct: 219 VDKMQTITSKMQVLYQMMNDYQDLFGDAGR 248


>gi|237833653|ref|XP_002366124.1| farnesyl pyrophosphate synthetase, putative [Toxoplasma gondii
           ME49]
 gi|211963788|gb|EEA98983.1| farnesyl pyrophosphate synthetase, putative [Toxoplasma gondii
           ME49]
          Length = 646

 Score = 46.3 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 8/98 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEII 131
            +G  +E +    L+ DD+  MD+   RRGK   +       +    + L+  A  + ++
Sbjct: 315 ALGWCVELLQSCFLVMDDV--MDHSLTRRGKQCWYRCDGIGVSNAVNDSLVLEAAVYRVL 372

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                      + Q +L           L GQ LD +D
Sbjct: 373 REYLGDHPAYAQLQDLLLGN----TFTTLIGQHLDSED 406



 Score = 43.6 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 3/59 (5%)

Query: 180 IQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + ++KT           G             + +     +G  FQ+ DD LDC  D PK
Sbjct: 491 VARLKTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSD-PK 548


>gi|313616871|gb|EFR89544.1| polyprenyl synthetase [Listeria innocua FSL S4-378]
          Length = 127

 Score = 46.3 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 209 RLRCFGENLGIIFQLADDLLDCEE-DLP 235
           +    G  LG+ FQ+ DD+LD    D  
Sbjct: 1   KCYNIGHYLGMAFQIIDDVLDYTSTDEG 28


>gi|221508116|gb|EEE33703.1| farnesyl pyrophosphate synthetase, putative [Toxoplasma gondii VEG]
          Length = 646

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 8/98 (8%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYA--FEII 131
            +G  +E +    L+ DD+  MD+   RRGK   +       +    + L+  A  + ++
Sbjct: 315 ALGWCVELLQSCFLVMDDV--MDHSLTRRGKQCWYRCDGIGVSNAVNDSLVLEAAVYRVL 372

Query: 132 SSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD 169
                      + Q +L           L GQ LD +D
Sbjct: 373 REYLGDHPAYAQLQDLLLGN----TFTTLIGQHLDSED 406



 Score = 43.6 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 3/59 (5%)

Query: 180 IQKMKTG-ALMCFACESGAIMAHA-SQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + ++KT           G             + +     +G  FQ+ DD LDC  D PK
Sbjct: 491 VARLKTSHYSFYLPTALGMTYGGLTDPALMAQAKELCLAIGEYFQVQDDYLDCFSD-PK 548


>gi|388220|emb|CAA48735.1| unnamed protein product [Escherichia coli]
          Length = 131

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           L+ +G  LG  FQL DDLLD   D
Sbjct: 4   LQDYGRYLGTAFQLIDDLLDYNAD 27


>gi|4725|emb|CAA29064.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 222

 Score = 46.3 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 179 MIQKMKTGALMCFACESGAIMAHA--SQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            I   KT     +   + A+       + + ++ R     LG  FQ+ DD LDC  
Sbjct: 62  FIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFG 117


>gi|78191057|gb|ABB29853.1| geranyl-geranyl pyrophosphate synthase [Nicotiana langsdorffii x
           Nicotiana sanderae]
          Length = 91

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 209 RLRCFGENLGIIFQLADDLLDCE 231
           +LR F   +G++FQ+ DD+LD  
Sbjct: 1   KLRKFARCIGLLFQVVDDILDVT 23


>gi|157167321|ref|XP_001660254.1| candidate tumor suppressor protein [Aedes aegypti]
 gi|108882899|gb|EAT47124.1| candidate tumor suppressor protein [Aedes aegypti]
          Length = 463

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 43/189 (22%)

Query: 74  RVGAAIECIHCYSLIHD---DLPSMDNG--YIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            +    E I    LIH    +L SMDN    +      +   +    A++ G+ LL  A 
Sbjct: 173 ALAEVTEMIRTSHLIHQGMINLQSMDNAGNDLSGDSEMI---FGNKMALLGGDYLLANAS 229

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHN----------------------------IGLQGML 160
           + I+S + Q  + + S     L  +                              L+ + 
Sbjct: 230 QQIASFRNQDLNMLISSAYRDLAESNFIGDRDEQNCPLPSKPVSTVAGKSSPDCSLEELG 289

Query: 161 GGQMLDIQDE-------FIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
            G + D              E +  +   +  G+L+  +C+   ++A   +  +++   F
Sbjct: 290 FGDLEDNTQPMSMESAMGNPEKEWSLRHVLGGGSLLGKSCQGALMLAGQPEELQKQGYLF 349

Query: 214 GENLGIIFQ 222
           G +L + +Q
Sbjct: 350 GRHLSLAWQ 358


>gi|195495712|ref|XP_002095383.1| GE19723 [Drosophila yakuba]
 gi|194181484|gb|EDW95095.1| GE19723 [Drosophila yakuba]
          Length = 446

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 80/265 (30%), Gaps = 72/265 (27%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 88  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPD 147

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRGKPT 106
                      +   +    E I    L+H+             D+ + D+         
Sbjct: 148 VEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD--------- 198

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------- 158
             + +     ++ G+ LL ++   +++ + Q    + S  +   + +  +          
Sbjct: 199 --MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPL 256

Query: 159 -----------MLGGQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGA 197
                      +  G   +  D              E +      +  G+L+  +C++  
Sbjct: 257 PYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASL 316

Query: 198 IMAHASQNEKERLRCFGENLGIIFQ 222
            +A  S+  +     FG++L + +Q
Sbjct: 317 KLAGQSEELQRHAYRFGKHLALAWQ 341


>gi|281206726|gb|EFA80911.1| farnesyl diphosphate synthase [Polysphondylium pallidum PN500]
          Length = 256

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 56/169 (33%), Gaps = 27/169 (15%)

Query: 87  LIHDDLPSMDNGYIRRGKPTV-----------HIQYDEVTAIIAGNGLLTYAFEIISSPK 135
           L+ DD+  +D G  RRG+              + +     AI     L    + I+    
Sbjct: 2   LVIDDI--VDRGLTRRGRTCWYLSSNTSSKDPNAKVGN-MAIFDACMLENMIYVILKKYF 58

Query: 136 TQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------FIDETQVFMIQKMKTGAL 188
           ++    +    + S            GQMLD+  E                I + KT  L
Sbjct: 59  SRESYYVDLIHLYSEV----CLKTYLGQMLDVLTEPTVGSLDGFTIENYNKIVEYKTSYL 114

Query: 189 MCF-ACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLPK 236
           + +    +   +        +  +    ++G  FQ+ DD  DC  D PK
Sbjct: 115 VFYLPIMAPMTLVGKGGTLDQSTKDLIVSMGTYFQIRDDYEDCYLD-PK 162


>gi|187955430|gb|AAI47754.1| Pdss2 protein [Mus musculus]
 gi|187955834|gb|AAI47753.1| Pdss2 protein [Mus musculus]
          Length = 264

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 42/124 (33%), Gaps = 19/124 (15%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   A                 +    E IH   L+H  + ++  
Sbjct: 112 LRGLVVLLISKAAGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSE 171

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++  +      ++++ +       G+ 
Sbjct: 172 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLALLQNT---KVKAERLTCAHTASGVS 227

Query: 158 GMLG 161
            +  
Sbjct: 228 CLAA 231


>gi|330903723|gb|EGH34295.1| polyprenyl synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 89

 Score = 45.9 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 3/28 (10%)

Query: 213 FGENLGIIFQLADDLLDCEED---LPKK 237
           +   +G+ FQ+ DD+LD E D   L K+
Sbjct: 4   YARAIGLAFQVQDDILDVESDTATLGKR 31


>gi|159901581|ref|YP_001547827.1| hypothetical protein Haur_5071 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894620|gb|ABX07699.1| hypothetical protein Haur_5071 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 280

 Score = 45.5 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 152 HNIGLQGMLGGQMLDIQDEFIDETQ-----VFMIQKMKTGALMCFACESGAIMAHASQNE 206
            +  +  M  GQ  DI  +     Q        I + KTGA    A  S  I+    ++ 
Sbjct: 134 WSDMMIRMSSGQYCDICSKNQPIEQDIAIKYQQIAQSKTGATYALAFGSIGIILFEDKSI 193

Query: 207 KERLRCFGENLGIIFQLADDLLDCEEDLPK 236
            E L   GE  G + Q  DD+ D E D+ K
Sbjct: 194 YESLAVIGEIYGTLIQYGDDINDYESDMDK 223


>gi|326469052|gb|EGD93061.1| farnesyl pyrophosphate synthetase [Trichophyton tonsurans CBS
           112818]
          Length = 321

 Score = 45.5 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 65/235 (27%), Gaps = 38/235 (16%)

Query: 12  NSKRIDTILDDLLLQTASH-----MQTQHNDRLLSAIRYALLGGKKIRSF------LVTE 60
           + +  + +   L+   + H     +     + L   +     GGK  R        L   
Sbjct: 6   SREDFNKVFPALVQDISEHAKQYNIPAPALEWLQKNLNENTPGGKLNRGLSVPDTALALL 65

Query: 61  CASLFNVNHLTALRVGAAIECIHCYSLIHDDLP-SMDNGYIRRGKPTVHIQYDEVTAIIA 119
              L          +G   E +  + L+ DD+   +D+   R              A++ 
Sbjct: 66  EKPLTEEQFKHLGLLGWMTELLQAFFLVSDDIMGQLDHSPWR--------------AML- 110

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
                    +   S    +            T    L  ++     ++     +  +   
Sbjct: 111 ---------KHFRSHPAYINLVELFHETTFQTELGQLCDLITAPEDNVDLNNFNMDKFNF 161

Query: 180 IQKMKTGALMCFACESGAI--MAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
           I   KT     +   + A+  +  A+     +       LG  FQ  DD LD   
Sbjct: 162 IVIYKTAYYSFYLPVALALHYLQLATPKNLRQAHDILIPLGQYFQAQDDYLDVFG 216


>gi|195480405|ref|XP_002086662.1| GE23254 [Drosophila yakuba]
 gi|194186452|gb|EDX00064.1| GE23254 [Drosophila yakuba]
          Length = 446

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 80/265 (30%), Gaps = 72/265 (27%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 88  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPD 147

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRGKPT 106
                      +   +    E I    L+H+             D+ + D+         
Sbjct: 148 VEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD--------- 198

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------- 158
             + +     ++ G+ LL ++   +++ + Q    + S  +   + +  +          
Sbjct: 199 --MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPL 256

Query: 159 -----------MLGGQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGA 197
                      +  G   +  D              E +      +  G+L+  +C++  
Sbjct: 257 PYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASL 316

Query: 198 IMAHASQNEKERLRCFGENLGIIFQ 222
            +A  S+  +     FG++L + +Q
Sbjct: 317 KLAGQSEELQRHAYRFGKHLALAWQ 341


>gi|196006065|ref|XP_002112899.1| hypothetical protein TRIADDRAFT_56502 [Trichoplax adhaerens]
 gi|190584940|gb|EDV25009.1| hypothetical protein TRIADDRAFT_56502 [Trichoplax adhaerens]
          Length = 382

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 61/180 (33%), Gaps = 29/180 (16%)

Query: 56  FLVTECASLFN-----------VNHLTALRVGAAIECIHCYSLIH-------DDLPSMDN 97
            +V   A                 + T   +    E I    +IH       + + S ++
Sbjct: 111 LIVLLIAKAAGKSQMIEEQSVDGIYPTQRSLAEITEIIRMAQIIHTGVVNLPEPIASEED 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
             +         Q     A++ G+ LL  A   ++  +      + S+ +  +     L 
Sbjct: 171 KEL---------QLGNKMAVLIGDFLLAKASNGLAKLENTQVVQLMSEAISEMMEGEFLC 221

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
             +   +     ++++  +   + +   G+L+  +C+    + + S+  +     FG+NL
Sbjct: 222 STIQDVIKSDIIDYVNLWEQRTLLRK--GSLLSKSCQCALKLVNHSEEAQMVANNFGQNL 279


>gi|91228844|ref|ZP_01262750.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 12G01]
 gi|91187615|gb|EAS73941.1| octaprenyl-diphosphate synthase [Vibrio alginolyticus 12G01]
          Length = 128

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 210 LRCFGENLGIIFQLADDLLDCEED 233
           ++ +G+ LG  FQL DD++D   D
Sbjct: 1   MQNYGKYLGTAFQLIDDVMDYTSD 24


>gi|297197409|ref|ZP_06914806.1| polyprenyl diphosphate synthase [Streptomyces sviceus ATCC 29083]
 gi|297146716|gb|EFH28304.1| polyprenyl diphosphate synthase [Streptomyces sviceus ATCC 29083]
          Length = 115

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 209 RLRCFGENLGIIFQLADDLLDCEED 233
            L   G +LG+ FQ+ DD+L    D
Sbjct: 1   ALDRAGRHLGVAFQIVDDVLGIWGD 25


>gi|12856514|dbj|BAB30693.1| unnamed protein product [Mus musculus]
          Length = 264

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 19/124 (15%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     +   A                 +    E IH   L+H  + ++  
Sbjct: 112 LRGLVVLLISKAAGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSE 171

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   I+  +      ++++ +       G+ 
Sbjct: 172 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGIALLQNT---KVKAERLTCAHTASGVS 227

Query: 158 GMLG 161
            +  
Sbjct: 228 CLAA 231


>gi|195592020|ref|XP_002085734.1| GD14926 [Drosophila simulans]
 gi|194197743|gb|EDX11319.1| GD14926 [Drosophila simulans]
          Length = 448

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 80/265 (30%), Gaps = 72/265 (27%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 90  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPD 149

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRGKPT 106
                      +   +    E I    L+H+             D+ + D+         
Sbjct: 150 VEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD--------- 200

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------- 158
             + +     ++ G+ LL ++   +++ + Q    + S  +   + +  +          
Sbjct: 201 --MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPL 258

Query: 159 -----------MLGGQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGA 197
                      +  G   +  D              E +      +  G+L+  +C++  
Sbjct: 259 PYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASL 318

Query: 198 IMAHASQNEKERLRCFGENLGIIFQ 222
            +A  S+  +     FG++L + +Q
Sbjct: 319 KLAGQSEELQRHAYRFGKHLALAWQ 343


>gi|21356309|ref|NP_649277.1| CG10585 [Drosophila melanogaster]
 gi|7296380|gb|AAF51668.1| CG10585 [Drosophila melanogaster]
 gi|15291505|gb|AAK93021.1| GH23839p [Drosophila melanogaster]
 gi|220945632|gb|ACL85359.1| CG10585-PA [synthetic construct]
 gi|220955430|gb|ACL90258.1| CG10585-PA [synthetic construct]
          Length = 448

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 80/265 (30%), Gaps = 72/265 (27%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 90  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPD 149

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRGKPT 106
                      +   +    E I    L+H+             D+ + D+         
Sbjct: 150 VEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD--------- 200

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------- 158
             + +     ++ G+ LL ++   +++ + Q    + S  +   + +  +          
Sbjct: 201 --MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPL 258

Query: 159 -----------MLGGQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGA 197
                      +  G   +  D              E +      +  G+L+  +C++  
Sbjct: 259 PYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASL 318

Query: 198 IMAHASQNEKERLRCFGENLGIIFQ 222
            +A  S+  +     FG++L + +Q
Sbjct: 319 KLAGQSEELQRHAYRFGKHLALAWQ 343


>gi|195348425|ref|XP_002040749.1| GM22336 [Drosophila sechellia]
 gi|194122259|gb|EDW44302.1| GM22336 [Drosophila sechellia]
          Length = 448

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 80/265 (30%), Gaps = 72/265 (27%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 90  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPD 149

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRGKPT 106
                      +   +    E I    L+H+             D+ + D+         
Sbjct: 150 VEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD--------- 200

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------- 158
             + +     ++ G+ LL ++   +++ + Q    + S  +   + +  +          
Sbjct: 201 --MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPL 258

Query: 159 -----------MLGGQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGA 197
                      +  G   +  D              E +      +  G+L+  +C++  
Sbjct: 259 PYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASL 318

Query: 198 IMAHASQNEKERLRCFGENLGIIFQ 222
            +A  S+  +     FG++L + +Q
Sbjct: 319 KLAGQSEELQRHAYRFGKHLALAWQ 343


>gi|296088154|emb|CBI35624.3| unnamed protein product [Vitis vinifera]
          Length = 87

 Score = 45.5 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 212 CFGENLGIIFQLADDLLDCEE 232
            + +NLG+ FQL DD+LD   
Sbjct: 5   EYAKNLGLAFQLIDDVLDFTG 25


>gi|194875285|ref|XP_001973569.1| GG16155 [Drosophila erecta]
 gi|190655352|gb|EDV52595.1| GG16155 [Drosophila erecta]
          Length = 446

 Score = 45.2 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 80/265 (30%), Gaps = 72/265 (27%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 88  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPD 147

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRGKPT 106
                      +   +    E I    L+H+             D+ + D+         
Sbjct: 148 VEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD--------- 198

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------- 158
             + +     ++ G+ LL ++   +++ + Q    + S  +   + +  +          
Sbjct: 199 --MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPL 256

Query: 159 -----------MLGGQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGA 197
                      +  G   +  D              E +      +  G+L+  +C++  
Sbjct: 257 PYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASL 316

Query: 198 IMAHASQNEKERLRCFGENLGIIFQ 222
            +A  S+  +     FG++L + +Q
Sbjct: 317 KLAGQSEELQRHAYRFGKHLALAWQ 341


>gi|296083873|emb|CBI24261.3| unnamed protein product [Vitis vinifera]
          Length = 86

 Score = 45.2 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 212 CFGENLGIIFQLADDLLDCEE 232
            + +NLG+ FQL DD+LD   
Sbjct: 5   EYAKNLGLAFQLIDDVLDFTG 25


>gi|308388535|gb|ADO30855.1| octaprenyl-diphosphate synthase [Neisseria meningitidis alpha710]
          Length = 127

 Score = 45.2 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
           ++ +G  +G  FQ+ DD+LD   +  
Sbjct: 1   MKDYGMYVGTAFQIIDDVLDYSGETE 26


>gi|188501751|gb|ACD54843.1| farnesyl pyrophosphate syntethase [Olea europaea]
          Length = 190

 Score = 44.8 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 160 LGGQMLDIQDEFIDETQVF--------MIQKMKTGAL-MCFACESGAIMAHASQNEKERL 210
             GQM+D+    + E  +          I + KT             +M+  + +    +
Sbjct: 6   AHGQMIDLITTLVGEKDLSKYSLSLHCRIVQYKTAYYSFYLPVACALLMSGENLDNHVDV 65

Query: 211 RCFGENLGIIFQLADDLLDCEED 233
           +     +G  FQ+ DD LDC  D
Sbjct: 66  KNVLVEMGTYFQVQDDYLDCFGD 88


>gi|170062029|ref|XP_001866491.1| candidate tumor suppressor protein [Culex quinquefasciatus]
 gi|167880062|gb|EDS43445.1| candidate tumor suppressor protein [Culex quinquefasciatus]
          Length = 437

 Score = 44.8 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 42/188 (22%)

Query: 74  RVGAAIECIHCYSLIHD---DLPSMDNG--YIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            +    E I    LIH    +L SMDN    +      +   +    A++ G+ LL  A 
Sbjct: 148 ALAEVTEMIRTSHLIHQGIINLQSMDNAGNDLSGDSEMI---FGNKMALLGGDYLLANAS 204

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHN---------------------------IGLQGMLG 161
           + +++ + Q  + + S     L  +                             L  +  
Sbjct: 205 QQVANLRNQDLNLLISSAYRDLAESNFIGDRDEQNNPLPSKPSTAVSTLSPDCRLDELDF 264

Query: 162 GQMLDI-------QDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
           G + D        +     E +  +   +  G+L+  +C+   ++A  S+  +++   FG
Sbjct: 265 GDLEDNTQSMDVERALGHPEKEWSLRHVLGGGSLLGKSCQGALMLAGRSEEMQKQGYLFG 324

Query: 215 ENLGIIFQ 222
            +L + +Q
Sbjct: 325 RHLSLAWQ 332


>gi|297291452|ref|XP_002803898.1| PREDICTED: decaprenyl-diphosphate synthase subunit 2 isoform 2
           [Macaca mulatta]
          Length = 297

 Score = 44.8 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 21/150 (14%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 224

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           G+          E        + +++K G 
Sbjct: 225 GVYHENSTSKAQEKGRLDYAKLRERIKAGK 254


>gi|297617610|ref|YP_003702769.1| hypothetical protein Slip_1441 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145447|gb|ADI02204.1| hypothetical protein Slip_1441 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 263

 Score = 44.8 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 58/169 (34%), Gaps = 19/169 (11%)

Query: 52  KIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQY 111
           ++   +         V     + +       +  + IHD +   + G    G+   +   
Sbjct: 45  RMLPQVTALVYRGLKVGFRCTVYMVTIFRLAYLANHIHDMVGDDEEGQGYDGRLQFN--- 101

Query: 112 DEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEF 171
                I+ G+ L     +++S   +Q   +  +++++ +     ++ M GG   D     
Sbjct: 102 -----ILIGDYLFGRVLKLLSENDSQYLAHTFAEMIMEINEGRVIRKMKGGNKKD----- 151

Query: 172 IDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
                   +   +   L   A  + +++A+    E+   R  G  LG+ 
Sbjct: 152 ------LEVIAKEKATLYKNAFLTASMVANLPAAEQLIYREVGNKLGLA 194


>gi|312112561|ref|YP_003990877.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
 gi|311217662|gb|ADP76266.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
          Length = 316

 Score = 44.8 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 22/169 (13%)

Query: 69  HLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
             + +   AAIE +   + I D++   D       + ++         +   N L+  AF
Sbjct: 69  RQSVITYAAAIELLILATDIFDEISDHDQSNEIISQLSIGET------VTIANALMMEAF 122

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ----DEFIDETQVFMIQKMK 184
            +I            + ++  L +         GQ  D+     +    E + F + + K
Sbjct: 123 RLILHNSKTDVYEKFAIIIHELQNA------CNGQWRDLHFVISEHVPTEEEYFHLIQQK 176

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           + +L+   CE       +  + +        ++GI  QL +D  D   D
Sbjct: 177 SSSLVKLVCEL------SDIHNQNIWGPIATDIGISGQLKNDAKDILSD 219


>gi|195162907|ref|XP_002022295.1| GL24462 [Drosophila persimilis]
 gi|194104256|gb|EDW26299.1| GL24462 [Drosophila persimilis]
          Length = 443

 Score = 44.4 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 75/255 (29%), Gaps = 58/255 (22%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 91  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPD 150

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH---IQYDEVTA 116
                      +   +    E I    L+H       N     G+       + +     
Sbjct: 151 VEQDKSAGVLHSQRALAEVTEMIRISHLVH-------NSSTEAGQDAATYDDMSFGNKIG 203

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML------DIQDE 170
           ++ G+ LL ++   +++ + Q    + S  +   + +  +                 Q  
Sbjct: 204 LLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLPYKPGTFQRP 263

Query: 171 FIDETQVFMIQKMKT-----------------------GALMCFACESGAIMAHASQNEK 207
            +     F    + T                       G+L+  +C++   +A  S+  +
Sbjct: 264 SLSVAVDFNEHDVMTPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQASLKLAGQSEELQ 323

Query: 208 ERLRCFGENLGIIFQ 222
                FG++L + +Q
Sbjct: 324 RHAYRFGKHLALAWQ 338


>gi|157167323|ref|XP_001660255.1| candidate tumor suppressor protein [Aedes aegypti]
 gi|108882900|gb|EAT47125.1| candidate tumor suppressor protein [Aedes aegypti]
          Length = 454

 Score = 44.4 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 38/186 (20%)

Query: 74  RVGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEI 130
            +    E I    LIH    +L SMDN        +  + +    A++ G+ LL +A + 
Sbjct: 165 ALAEVTEMIRSSQLIHQGVINLQSMDNAGNNLSGDS-DMVFGNKIALLGGDYLLAHASKQ 223

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGL-------------------------------QGM 159
           I+S + Q  + + +     L  +  +                                G 
Sbjct: 224 IASLRNQDLNMLMTSAYRDLAESAFIGESDDQNNPLPSKPETPAGMNSHECTLEELDFGD 283

Query: 160 LGGQMLDIQDEFI---DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGEN 216
           +   M  ++ E +    E +  +   +  G+L+  +C    ++A      +++   FG++
Sbjct: 284 VRDNMEPMRIEGVMGHPEKEWSLRHVLGGGSLLGKSCHGALMLAGHPDELQKQGYLFGKH 343

Query: 217 LGIIFQ 222
           + + +Q
Sbjct: 344 MSLAWQ 349


>gi|38047633|gb|AAR09719.1| similar to Drosophila melanogaster CG10585 [Drosophila yakuba]
          Length = 217

 Score = 44.4 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 61/191 (31%), Gaps = 53/191 (27%)

Query: 74  RVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRGKPTVHIQYDEVTAIIAG 120
            +    E I    L+H+             D+ + D+           + +     ++ G
Sbjct: 30  ALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD-----------MSFGNKIGLLTG 78

Query: 121 NGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------------------MLG 161
           + LL ++   +++ + Q    + S  +   + +  +                     +  
Sbjct: 79  DYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLPYKPGTFQRPSLSV 138

Query: 162 GQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
           G   +  D              E +      +  G+L+  +C++   +A  S+  +    
Sbjct: 139 GVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLKLAGQSEELQRHAY 198

Query: 212 CFGENLGIIFQ 222
            FG++L + +Q
Sbjct: 199 RFGKHLALAWQ 209


>gi|13383237|dbj|BAB39469.1| putative GGPP synthase 2 [Lactuca indica var. laciniata]
          Length = 127

 Score = 44.0 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 133 SPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQD---EFIDETQVFMIQKMKTGALM 189
           +P            +  L  +IG +G++ GQ++DI     + +   Q+ +I   KT AL 
Sbjct: 37  APPFAASPERVLAAVGELAKSIGTEGLVAGQVVDIASTGAKDVGLDQLELIHIHKTAALY 96

Query: 190 CFACESG 196
             +C  G
Sbjct: 97  GSSCRIG 103


>gi|307945554|ref|ZP_07660890.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
 gi|307771427|gb|EFO30652.1| octaprenyl pyrophosphate synthetase [Roseibium sp. TrichSKD4]
          Length = 141

 Score = 44.0 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 198 IMAHASQNEKERLRCFGENLGIIFQLADDLLDC---EEDLPK 236
           ++A    + K   R +G  LG  FQ+ DD LD      DL K
Sbjct: 1   MIADQDASMKAAARTYGLELGFAFQMVDDALDYGGTSADLGK 42


>gi|125978361|ref|XP_001353213.1| GA10416 [Drosophila pseudoobscura pseudoobscura]
 gi|54641966|gb|EAL30715.1| GA10416 [Drosophila pseudoobscura pseudoobscura]
          Length = 449

 Score = 43.6 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 78/255 (30%), Gaps = 52/255 (20%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 91  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPD 150

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVH---IQYDEVTA 116
                      +   +    E I    L+H+ + ++       G+       + +     
Sbjct: 151 VEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNL-QSSTEAGQDAATYDDMSFGNKIG 209

Query: 117 IIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML------DIQDE 170
           ++ G+ LL ++   +++ + Q    + S  +   + +  +                 Q  
Sbjct: 210 LLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPLPYKPGTFQRP 269

Query: 171 FIDETQVFMIQKMKT-----------------------GALMCFACESGAIMAHASQNEK 207
            +     F    + T                       G+L+  +C++   +A  S+  +
Sbjct: 270 SLSVAVDFNEHDVMTPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQASLKLAGQSEELQ 329

Query: 208 ERLRCFGENLGIIFQ 222
                FG++L + +Q
Sbjct: 330 RHAYRFGKHLALAWQ 344


>gi|119709582|dbj|BAF42687.1| geranylgeranyl diphosphate synthase-1-C-isoform [Nasutitermes
           takasagoensis]
 gi|119709585|dbj|BAF42689.1| geranylgeranyl diphosphate synthase-1-C-isoform [Nasutitermes
           takasagoensis]
          Length = 236

 Score = 43.2 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 3/124 (2%)

Query: 34  QHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDL 92
           +  +++L  + + L + GK+    L +       V       V       H   L+ DD+
Sbjct: 19  EQEEKILQPVAHTLQIPGKQHLVKLASAYNYWLKVPADKLTVVKDIEHAFHYSLLLIDDI 78

Query: 93  PSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTH 152
              DN  +RRG P  H  Y   +   A   L+    +   S        +  + +L + +
Sbjct: 79  E--DNSVLRRGIPVAHSIYGVPSTTNASIYLMLKGVKRALSLNHPDAIALCIEQLLDMYY 136

Query: 153 NIGL 156
             GL
Sbjct: 137 GQGL 140


>gi|328793320|ref|XP_001123325.2| PREDICTED: farnesyl pyrophosphate synthase-like [Apis mellifera]
          Length = 332

 Score = 43.2 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 17/162 (10%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           +  + ++ DD+  +DN  I R +PT H++     AI     + T  +++I          
Sbjct: 69  MQAFHIMIDDI--LDNVNIGRNQPTCHVKIGLG-AINDSLIMKTCTYKLIRKYFKSKNCY 125

Query: 142 IRSQLMLSLTHNIGLQGMLGGQML------DIQDEFIDETQVFMIQKMKTGAL-----MC 190
                +L   H   + G     +       +   +     Q   + K KT          
Sbjct: 126 TDIVDILLKYHTKTVHGKCLNILTSIDSGKNANFKVFSMDQYNHLIKHKTSYFSFILPFS 185

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
            A     I+                 +  +FQ+ +D L+   
Sbjct: 186 LAMRFAGII---DLEMHREAEKILTKISHLFQVQNDFLNYYS 224


>gi|195441005|ref|XP_002068323.1| GK25396 [Drosophila willistoni]
 gi|194164408|gb|EDW79309.1| GK25396 [Drosophila willistoni]
          Length = 443

 Score = 43.2 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 80/265 (30%), Gaps = 72/265 (27%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 85  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAASIPD 144

Query: 67  -------VNHLTALRVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRGKPT 106
                      +   +    E I    L+H+             D+ + D+         
Sbjct: 145 VEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQASTEAGQDVATYDD--------- 195

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------- 158
             + +     ++ G+ LL ++   +++ + Q    + S  +   + +  +          
Sbjct: 196 --MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPL 253

Query: 159 -----------MLGGQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGA 197
                      +  G   +  D              E +      +  G+L+  +C++  
Sbjct: 254 PYKPGTFQRPSLNVGVDFNEHDVMTPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQASL 313

Query: 198 IMAHASQNEKERLRCFGENLGIIFQ 222
            +A  S+  +     FG++L + +Q
Sbjct: 314 KLAGQSEELQRHAYRFGKHLAMAWQ 338


>gi|118108024|ref|XP_422855.2| PREDICTED: similar to Chain  , Avian Farnesyl Diphosphate Synthase
           (Fps) (E.C.2.5.1.10), partial [Gallus gallus]
          Length = 71

 Score = 42.8 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           S+ E E  +     +G  FQ+ DD LDC  D
Sbjct: 5   SKEEHENAKAILLEMGEYFQIQDDYLDCFGD 35


>gi|225710672|gb|ACO11182.1| Decaprenyl-diphosphate synthase subunit 2 [Caligus rogercresseyi]
          Length = 369

 Score = 42.8 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 26/191 (13%)

Query: 53  IRSFLVTECASLFNVNHL---------------TALRVGAAIECIHCYSLIH-------D 90
           +R  +    A L N +                 T  ++   +E I+    IH       +
Sbjct: 90  VRGLVALLFARLTNDSKAFRGREDFIEEFGVLKTQRQLSETLELIYSAQYIHKSLLNLPN 149

Query: 91  DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSL 150
           DL S ++  ++     + +++    A++ G+ LL  A   ++  ++ +  +I S+ ++  
Sbjct: 150 DLHSKEDSELKDDL--LRLEFGNKIALLGGDYLLAQACMNLALLRSSMIVDIISKSLIDF 207

Query: 151 THNIGLQGM-LGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKER 209
           T    +    + G+ L  +D+ +      +   +    LM    +    +A  S   +  
Sbjct: 208 TQAEFITERDVSGRHLPREDQ-LSLEHWELRNSLAWAGLMGNVLKGSLSLAGHSDKNQSL 266

Query: 210 LRCFGENLGII 220
              FG +  + 
Sbjct: 267 GHRFGLHFALA 277


>gi|195011823|ref|XP_001983336.1| GH15641 [Drosophila grimshawi]
 gi|193896818|gb|EDV95684.1| GH15641 [Drosophila grimshawi]
          Length = 445

 Score = 42.8 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 80/265 (30%), Gaps = 72/265 (27%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFN------- 66
           +L D +   A H++        L+   ++ L  GK        +V   +           
Sbjct: 87  LLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAASIPD 146

Query: 67  -------VNHLTALRVGAAIECIHCYSLIH----------D---DLPSMDNGYIRRGKPT 106
                      +   +    E I    L+H          D   D+ + D+         
Sbjct: 147 AEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTDAGQDVNTYDD--------- 197

Query: 107 VHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQG-------- 158
             + +     ++ G+ LL ++   +++ + Q    + S  +   + +  +          
Sbjct: 198 --MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNPL 255

Query: 159 -----------MLGGQMLDIQDEFID----------ETQVFMIQKMKTGALMCFACESGA 197
                      +  G   +  D              E +      +  G+L+  +C++  
Sbjct: 256 PFKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEQEWECRNILNAGSLLGKSCQASL 315

Query: 198 IMAHASQNEKERLRCFGENLGIIFQ 222
            +A  S+  +     FG++L + +Q
Sbjct: 316 KLAGQSEEMQRHAYRFGKHLALAWQ 340


>gi|242077482|ref|XP_002448677.1| hypothetical protein SORBIDRAFT_06g031320 [Sorghum bicolor]
 gi|241939860|gb|EES13005.1| hypothetical protein SORBIDRAFT_06g031320 [Sorghum bicolor]
          Length = 329

 Score = 42.8 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 182 KMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K KT             ++          LR     +GI FQ  DD LDC  D
Sbjct: 175 KYKTSYYSFYLPVACALLLCGTKLENISGLRDVLIEMGIYFQAQDDYLDCFAD 227


>gi|170062027|ref|XP_001866490.1| candidate tumor suppressor protein [Culex quinquefasciatus]
 gi|167880061|gb|EDS43444.1| candidate tumor suppressor protein [Culex quinquefasciatus]
          Length = 450

 Score = 42.5 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 44/189 (23%)

Query: 74  RVGAAIECIHCYSLIHD---DLPSMDNG--YIRRGKPTVHIQYDEVTAIIAGNGLLTYAF 128
            +    E I    LIH    +L SMDN    +      +   +    A++ G+ LL +A 
Sbjct: 161 ALAEVTEMIRSSHLIHQGIINLQSMDNAGNDLSGDSDMI---FGNKIALLGGDYLLAHAS 217

Query: 129 EIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDI------------QDEFIDETQ 176
           + I+S + Q  + + +     L  +  + G    Q   I             D  +DE  
Sbjct: 218 KQIASLRNQDLNMLMTSAYRDLAESAFI-GESDDQNSPIPSKPETPAGTITPDCSLDELN 276

Query: 177 VFMIQKMK-----------------------TGALMCFACESGAIMAHASQNEKERLRCF 213
              +Q  K                        G+L+  +C    ++A   ++ +++   F
Sbjct: 277 FGDVQNNKEPMIIEGVMGHPEKEWTLRHVLGGGSLLGKSCHGALMLAGHPEDLQKQGYLF 336

Query: 214 GENLGIIFQ 222
           G+++ + +Q
Sbjct: 337 GKHMSLAWQ 345


>gi|154304945|ref|XP_001552876.1| hypothetical protein BC1G_09058 [Botryotinia fuckeliana B05.10]
 gi|150853920|gb|EDN29112.1| hypothetical protein BC1G_09058 [Botryotinia fuckeliana B05.10]
          Length = 307

 Score = 42.5 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
           G  L  +D      E     +   KTG L   A +     +  S +    +      +GI
Sbjct: 137 GMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLAVKLMQAESQTSGDCVPLV----NLIGI 192

Query: 220 IFQLADDL 227
           IFQ+ DD 
Sbjct: 193 IFQIRDDY 200


>gi|226945451|ref|YP_002800524.1| geranylgeranyl pyrophosphate synthase protein [Azotobacter
           vinelandii DJ]
 gi|226720378|gb|ACO79549.1| geranylgeranyl pyrophosphate synthase protein [Azotobacter
           vinelandii DJ]
          Length = 322

 Score = 42.5 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 65/185 (35%), Gaps = 23/185 (12%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             LV +     N       ++ AA+  +       D +  MD             + +  
Sbjct: 53  PLLVADGVR--NGIADATRQLTAALTILEAGIYTLDHI--MDR------------EVEGP 96

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLT----HNIGLQGMLGGQMLDIQ-- 168
            A +    +L  A  +IS    Q+  ++R     S+      + GL  +  GQ+ DI   
Sbjct: 97  VAELPPGQILLGATSMISHVPYQILSHLRGAEASSVAMLARFSDGLARIAAGQLADIAAT 156

Query: 169 -DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDL 227
             + +    +  + +MKTG          A  A A+  + E    +G  LGI  QL  DL
Sbjct: 157 TGQAVAREGIEEVVRMKTGERRALYAALAAQHAGATPEQVEAYAAYGRALGIARQLRSDL 216

Query: 228 LDCEE 232
            D   
Sbjct: 217 QDLFG 221


>gi|194383898|dbj|BAG59307.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 42.5 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 21/150 (14%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQ 157
                G P   +Q+    AI++G+ LL  A   ++     L  N +   +L+      +Q
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA-----LLQNTKVVELLASALMDLVQ 224

Query: 158 GMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           G+          E        + +++K G 
Sbjct: 225 GVYHENSTSKAQEKGRLDYAKLRERIKAGK 254


>gi|74317715|ref|YP_315455.1| farnesyl-diphosphate farnesyltransferase [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057210|gb|AAZ97650.1| putative terpenoid synthase [Thiobacillus denitrificans ATCC 25259]
          Length = 281

 Score = 42.5 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 3/113 (2%)

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L +  E I         +  ++ +        +Q  L  +++D     ++  +    + +
Sbjct: 60  LAWWREEIGRFAAGAATHPATRALADTARGASVQPALLLEIVDGMAMDLEHARYADFRAL 119

Query: 184 KTGALMCFACE---SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K       +     +  I   A       +R +   LG+ FQL + + D  ED
Sbjct: 120 KLYCHRAASVVGEIAAGIFEGARGEHDREVRRYAHELGLAFQLTNIIRDVGED 172


>gi|326431519|gb|EGD77089.1| hypothetical protein PTSG_07427 [Salpingoeca sp. ATCC 50818]
          Length = 164

 Score = 42.1 bits (98), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 180 IQKMKTGALMCFACESGAI-MAHASQNEK-ERLRCFGENLGIIFQLADDLLDCEE 232
           I K KT     +   + A+ MA     +     +     +G+ FQ+ DD LDC  
Sbjct: 6   IVKYKTAFYSFYLPVAAAMHMAGIKDEKAFANAQEILLEMGVFFQVQDDYLDCYG 60


>gi|284022477|gb|ADB65787.1| prenyl transferase [Metarhizium anisopliae]
 gi|322695229|gb|EFY87041.1| prenyl transferase [Metarhizium acridum CQMa 102]
          Length = 341

 Score = 42.1 bits (98), Expect = 0.059,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 32/165 (19%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-VTAIIAGNGLLTYAFEIISSPKTQLKD 140
           +H   ++ DD+   D+   R+ + T H+ Y    TA          A+ +++    +   
Sbjct: 107 VHFCLILVDDIC--DDSTKRKNQTTAHMIYGSCETA--------NRAYFVLTKMINR--- 153

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDE-------FIDETQ----VFMIQKMKTGALM 189
            +R + +L +     L+ ML GQ L +             E +       + ++KTG L 
Sbjct: 154 AMRERPVLGVELLKALEQMLEGQDLSLVWRRDGLKAFGFSEEERVPMYKNMAQLKTGTLF 213

Query: 190 CFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                 G ++        +    FG       QL +D  +   D 
Sbjct: 214 ---VLLGRLLNDGGDQLDDLFTRFGWYA----QLQNDCKNIYSDE 251


>gi|332025482|gb|EGI65645.1| Geranylgeranyl pyrophosphate synthetase [Acromyrmex echinatior]
          Length = 236

 Score = 42.1 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 16/140 (11%)

Query: 90  DDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLS 149
           DD+   D   +R G P  +  Y    +I A N L   A E   +    +   I  +  + 
Sbjct: 1   DDIQ--DEAIMRNGFPVTNSVYGLHYSINAANYLQFIACEKFFNLH-PMAVKIVIEQFME 57

Query: 150 LTHNIGLQGMLGGQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEK 207
                G+        L  +++FI   E    ++   K+G L     +   + +   ++  
Sbjct: 58  YYKGQGM-------DLYWKEKFICPKEEDYNILAVRKSGWLNIMVVKLMKLFSTYEEDVL 110

Query: 208 ERLRCFGENLGIIFQLADDL 227
                FG       Q+ DD 
Sbjct: 111 SLASTFGLYR----QIHDDY 126


>gi|170027726|ref|XP_001841748.1| farnesyl pyrophosphate synthetase [Culex quinquefasciatus]
 gi|167862318|gb|EDS25701.1| farnesyl pyrophosphate synthetase [Culex quinquefasciatus]
          Length = 352

 Score = 42.1 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 57/155 (36%), Gaps = 10/155 (6%)

Query: 88  IHDDLPSMDNGYIRRGKPTVHIQYDEVT-AIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           I DD+  +DN   R GKP  H + D    A+  G  +      ++++   +   +   + 
Sbjct: 103 IFDDI--VDNSKTRYGKPCWHRRSDVGLSAVFDGLLIDKSIHYLMNTKFNRDIIDAVLEK 160

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAH-ASQN 205
           +  L     L  ML         +  +      +  ++   ++         +A    QN
Sbjct: 161 LFFLDAGQTLNDMLS---KVHDLDSFNRASYEKMVYLQDSTIITLPMRLAMCLAGIEDQN 217

Query: 206 EKERLRCFGENLGIIFQLADDLLDCEED---LPKK 237
              +++     + ++FQ+ +D  D   D   L K+
Sbjct: 218 AVNKMQIIIAKVEVLFQMMNDYQDLFGDAELLGKE 252


>gi|238609989|ref|XP_002397611.1| hypothetical protein MPER_01928 [Moniliophthora perniciosa FA553]
 gi|215472450|gb|EEB98541.1| hypothetical protein MPER_01928 [Moniliophthora perniciosa FA553]
          Length = 121

 Score = 41.7 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 40/120 (33%)

Query: 24  LLQTASHMQTQHNDRLLS-AIRYALLGGKKIRSFLVTECASL---FNVNHLTALRVG--- 76
           + ++  H+    +  L   A  Y L   K++R  +V   +        N    L      
Sbjct: 4   VRESLGHLLGSAHPSLDEIAKYYFLRPSKQLRPLIVLLFSQATNGLGKNWPAKLWAAECQ 63

Query: 77  ------------------------------AAIECIH-CYSLIHDDLPSMDNGYIRRGKP 105
                                         A     H   SL+HDD+  +D   +RRG  
Sbjct: 64  GAGGCMDELDKPLSRPDVLNDWNPNIPNHTALFTLSHLSASLLHDDV--IDESPLRRGSA 121


>gi|10801550|dbj|BAB16688.1| FPP synthase 2 [Eucommia ulmoides]
          Length = 135

 Score = 41.7 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 14/124 (11%)

Query: 87  LIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQL 146
           L+ DD+  MD+ + RRG+P           I   +GL+     I    K   K       
Sbjct: 2   LVLDDI--MDSSHTRRGQPCWFRLPKVGM-IAVNDGLILRN-HIPRILKKHFKGKPYYVD 57

Query: 147 MLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGAL-MCFACESGA 197
           +L L + +       GQM+D+    + E  +          I + KT             
Sbjct: 58  LLDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLPLHHRIVQYKTAYYSFYLPVACAL 116

Query: 198 IMAH 201
           +M+ 
Sbjct: 117 VMSG 120


>gi|285808231|gb|ADC35765.1| hypothetical protein [uncultured bacterium 293]
          Length = 107

 Score = 41.7 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 209 RLRCFGENLGIIFQLADDLLDCEE 232
            ++ + +NLG+ FQ+ DDL+D   
Sbjct: 20  AVKAYAKNLGLAFQIVDDLIDAVG 43


>gi|74273820|gb|ABA01558.1| farensyl diphosphate synthase [Bupleurum falcatum]
          Length = 38

 Score = 41.7 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 75  VGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTV 107
           +G  IE +  Y L+ DD+  MD  + RRG+P  
Sbjct: 1   LGWCIEWLQAYFLVLDDI--MDGSHTRRGQPCW 31


>gi|242012483|ref|XP_002426962.1| hexaprenyl pyrophosphate synthetase, putative [Pediculus humanus
           corporis]
 gi|212511191|gb|EEB14224.1| hexaprenyl pyrophosphate synthetase, putative [Pediculus humanus
           corporis]
          Length = 383

 Score = 41.3 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 3/152 (1%)

Query: 74  RVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISS 133
            +    E I    L+H  L ++  G          + +    A+++G+ LL  A   ++ 
Sbjct: 125 ALAEVTEMIRTSHLVHKGLVNIYPGLYSETSVLNDMTFGNKIALLSGDYLLGNACAELAG 184

Query: 134 PKTQLKDNIRSQLMLSLTHNIGL---QGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
            + Q    + S  +  LT    +                      +  +   +  G+L+ 
Sbjct: 185 LRNQSLVELMSSAIRDLTEGEFIGPRDKQNNPMPSPPGPPGTAMEEWTLRNVLSAGSLLG 244

Query: 191 FACESGAIMAHASQNEKERLRCFGENLGIIFQ 222
            +C+    +       +E+  CFG++L + +Q
Sbjct: 245 KSCQGTLQLGGHGPKFQEQGFCFGKHLALAWQ 276


>gi|213422747|ref|ZP_03355795.1| hypothetical protein Salmonentericaenterica_35292 [Salmonella
          enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 99

 Score = 41.3 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 3  GGLPSKLQENSKRIDTI-LDDLLLQTASHMQTQHND-RLLSAIRYALL--GGKKIRSFLV 58
          G +      N ++I+ +   D+    A+ ++  ++D +L++ + Y ++  GGK+IR  + 
Sbjct: 25 GAISPAFAMNLEKINELTAQDMAGVNATILEQLNSDVQLINQLGYYIISGGGKRIRPMIA 84

Query: 59 TECASLFNVNHLTAL 73
             A          +
Sbjct: 85 VLAARAVGYQGNAHV 99


>gi|296085594|emb|CBI29369.3| unnamed protein product [Vitis vinifera]
          Length = 87

 Score = 41.3 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 212 CFGENLGIIFQLADDLLDCEE 232
            + +NLG+ FQL D++LD   
Sbjct: 5   EYAKNLGLAFQLIDNVLDFTG 25


>gi|12082283|dbj|BAB20822.1| putative FPP synthase [Taraxacum japonicum]
          Length = 136

 Score = 40.9 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           Y L+ DD+  MD  + RRG+P           I A +G++     +    K   +     
Sbjct: 1   YFLVLDDI--MDESHTRRGQPCWFRLPKVGM-IAANDGIILRN-HVPRILKKHFRGKPYY 56

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGALMCFACESG 196
             ++ L + +       GQM+D+    + E  +          I + KT     +   + 
Sbjct: 57  IDLVDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLSIHRRIVQYKTAYYSFYLPVAC 115

Query: 197 AIM 199
           A++
Sbjct: 116 ALL 118


>gi|312376900|gb|EFR23860.1| hypothetical protein AND_11967 [Anopheles darlingi]
          Length = 450

 Score = 40.9 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 41/188 (21%)

Query: 75  VGAAIECIHCYSLIHD---DLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEII 131
           +    E I    L+H    +L  + +     G  +    +    A+++G+ LL  A   +
Sbjct: 159 LAEITEMIRTAQLVHQGMVNLQPLADAGNELGSDS-DTIFGNKIALLSGDYLLGNACLQL 217

Query: 132 SSPKTQLKDNIRSQLM-----------------------LSLTHNIGLQGMLGGQMLDIQ 168
           +  + Q    + S  +                       L+ T   G +    G++    
Sbjct: 218 AGLRNQALIELISSAVRDLAESNFVGVRDLQNNPLPSKPLARTTGEGAEVSADGEVDLSF 277

Query: 169 DEFID--------------ETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFG 214
            + +D              E +  +   +  G L+  +C+   ++A   +  + R   FG
Sbjct: 278 GDLVDNTQPLSLAGVMGDPEKEWALRHILGAGTLLGKSCQGAMMLAGQPEALQRRGYMFG 337

Query: 215 ENLGIIFQ 222
           ++L + +Q
Sbjct: 338 KHLSLAWQ 345


>gi|12313655|dbj|BAB21061.1| putative FPP synthase [Sonchus oleraceus]
          Length = 136

 Score = 40.9 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 13/123 (10%)

Query: 85  YSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRS 144
           Y L+ DD+  MD  + RRG+P    +   V  I A +G++     I    K   +     
Sbjct: 1   YFLVLDDI--MDESHTRRGQPC-WFRLPIVGMIAANDGIILRN-HIPRILKKHFRGKPYY 56

Query: 145 QLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQV--------FMIQKMKTGALMCFACESG 196
             ++ L + +       GQM+D+    + E  +          I + KT     +   + 
Sbjct: 57  IDLVDLFNEVE-FQTASGQMIDLITTLVGEKDLSKYSLSIHKRIVQYKTAYYSFYLPVAC 115

Query: 197 AIM 199
           A++
Sbjct: 116 ALL 118


>gi|326367276|gb|ADZ55268.1| geranylgeranyl diphosphate synthase 1 [Neophocaena phocaenoides]
 gi|326367286|gb|ADZ55273.1| geranylgeranyl diphosphate synthase 1 [Tursiops aduncus]
 gi|326367292|gb|ADZ55276.1| geranylgeranyl diphosphate synthase 1 [Balaenoptera omurai]
 gi|326367294|gb|ADZ55277.1| geranylgeranyl diphosphate synthase 1 [Kogia sima]
 gi|326367296|gb|ADZ55278.1| geranylgeranyl diphosphate synthase 1 [Platanista gangetica]
          Length = 107

 Score = 40.9 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I + N +     E + +        + ++ +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              +  +D +    E +   +   KTG L   A     + +   ++ K  L
Sbjct: 56  --DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL 104


>gi|326367298|gb|ADZ55279.1| geranylgeranyl diphosphate synthase 1 [Elaphurus davidianus]
          Length = 107

 Score = 40.5 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 9/112 (8%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I + N +     E + +        + ++ +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLR 211
              +  +D +    E +   +   KTG L   A     + +   ++ K  L 
Sbjct: 56  --DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLD 105


>gi|91084147|ref|XP_970126.1| PREDICTED: similar to candidate tumor suppressor protein [Tribolium
           castaneum]
 gi|270008055|gb|EFA04503.1| hypothetical protein TcasGA2_TC014811 [Tribolium castaneum]
          Length = 413

 Score = 40.5 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 76/253 (30%), Gaps = 57/253 (22%)

Query: 19  ILDDLLLQTASHMQ--TQHNDRLLSAIRYALLGGKKIR---SFLVTECASLFNVNHL--- 70
           +L D +   A H++     N  LL   +  L  GK        +V   +     +     
Sbjct: 67  LLSDEIANVALHLRKLVGSNHPLLKTAKNLLYNGKNNMQAWGLIVLLVSKAAGHSSDIPD 126

Query: 71  -----------TALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHI------QYDE 113
                      +   +    E I    L+H  L ++        +P+          +  
Sbjct: 127 LEQDKAAGVLHSQRALAEVTEMIRTSHLVHKGLVNL--------QPSAATDASGDMMFGN 178

Query: 114 VTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFID 173
             A+++G+ LL+ +   +++ + Q    + S  +  L     +                D
Sbjct: 179 KIALLSGDYLLSNSCTELANLRNQDLVELMSSAVRDLAEAEFVGPRDKQNNPLPAKPRSD 238

Query: 174 ETQVFMI------------------------QKMKTGALMCFACESGAIMAHASQNEKER 209
             +                              +  G+L+  +C+    +A      +E+
Sbjct: 239 IVEYKQFTDKTLEPLVVSEALGNARAEWTLRHVLNAGSLLGKSCQGTLKLAGHPLELQEQ 298

Query: 210 LRCFGENLGIIFQ 222
              FG++L + +Q
Sbjct: 299 GYLFGKHLALAWQ 311


>gi|329133305|gb|AEB78593.1| geranylgeranyl diphosphate synthase 1 [Ceratotherium simum]
          Length = 119

 Score = 40.5 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I + N +     E + +        + ++ +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              +  +D +    E +   +   KTG L   A     + +   +N K  L
Sbjct: 56  --DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKENLKPLL 104


>gi|34858175|ref|XP_227370.2| PREDICTED: farnesyl pyrophosphate synthetase-like [Rattus
           norvegicus]
 gi|109467084|ref|XP_001054824.1| PREDICTED: farnesyl pyrophosphate synthetase-like [Rattus
           norvegicus]
          Length = 160

 Score = 40.1 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 18/57 (31%), Gaps = 1/57 (1%)

Query: 178 FMIQKMKTGALMCFACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCEED 233
           F I+             +   MA    + E          +G  FQ+ DD LD   D
Sbjct: 2   FKIESCTAFYSFYLPIAAAMYMAGFDREKEHANALKILLEMGKFFQIQDDYLDLFGD 58


>gi|118387065|ref|XP_001026648.1| hypothetical protein TTHERM_01128540 [Tetrahymena thermophila]
 gi|89308415|gb|EAS06403.1| hypothetical protein TTHERM_01128540 [Tetrahymena thermophila
           SB210]
          Length = 235

 Score = 40.1 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 51/110 (46%), Gaps = 2/110 (1%)

Query: 109 IQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQ 168
                   +++G+     A  + S           S++  +++  + +Q  L  +ML  +
Sbjct: 86  KTLSNKKLVLSGDFFHVKASSLSSKIGYIEIPQYFSKIEENVSKGMIIQETLNKRML--K 143

Query: 169 DEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLG 218
           +E +++ +V  + +++  +L+ ++ +   ++   +Q ++E+L   G  +G
Sbjct: 144 NEPVEQKEVEKMIELRDTSLISYSLKCLGVIIQLNQQDQEQLYQIGVTIG 193


>gi|317506406|ref|ZP_07964211.1| hypothetical protein HMPREF9336_00581 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255286|gb|EFV14551.1| hypothetical protein HMPREF9336_00581 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 130

 Score = 40.1 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLPK 236
           +  FG +LGI FQ  DD+L    +  +
Sbjct: 1   MSAFGRHLGIAFQYVDDVLGIWGESAQ 27


>gi|325067553|ref|ZP_08126226.1| geranylgeranyl pyrophosphate synthase [Actinomyces oris K20]
          Length = 76

 Score = 40.1 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 6/70 (8%)

Query: 1  MNGGLPSKLQENSKRIDTIL---DDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFL 57
          M G LP    E   RI   L   +D L++  +      N         A  GGK++R  L
Sbjct: 1  MIGSLPLSAPELESRIIPALQTIEDRLMEVVTSADETINPP---TSHLAEAGGKRLRPVL 57

Query: 58 VTECASLFNV 67
              A L + 
Sbjct: 58 ALLTAQLGDP 67


>gi|326498241|dbj|BAJ98548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 159

 Score = 40.1 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 3/25 (12%)

Query: 215 ENLGIIFQLADDLLDCE---EDLPK 236
            ++G++FQ+ DD+LD     E+L K
Sbjct: 75  RSIGLLFQVVDDILDVTKSSEELGK 99


>gi|254389401|ref|ZP_05004629.1| hypothetical protein SSCG_01956 [Streptomyces clavuligerus ATCC
           27064]
 gi|197703116|gb|EDY48928.1| hypothetical protein SSCG_01956 [Streptomyces clavuligerus ATCC
           27064]
          Length = 167

 Score = 40.1 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 16/38 (42%)

Query: 195 SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
             A++  A       L  FG  LG  +Q+ DD  D E 
Sbjct: 1   MAALVTCAPPALVGALTDFGMALGTAYQITDDTADLEG 38


>gi|317156440|ref|XP_001825747.2| hypothetical protein AOR_1_88054 [Aspergillus oryzae RIB40]
          Length = 346

 Score = 40.1 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 81  CIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKT 136
             H  SL+ DD+   D+   RRG P  H+ Y     +   +     AF +    K 
Sbjct: 254 LFHS-SLMLDDIQ--DDSSKRRGMPAAHVMYGVGQTVNCVSYTGAKAFFLCEELKN 306


>gi|326367290|gb|ADZ55275.1| geranylgeranyl diphosphate synthase 1 [Sousa chinensis]
          Length = 107

 Score = 40.1 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I + N +     E + +        + ++ +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINSANYVHFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                 +D +    E +   +   KTG L   A     + +   ++ K  L
Sbjct: 56  --DTYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL 104


>gi|326367282|gb|ADZ55271.1| geranylgeranyl diphosphate synthase 1 [Grampus griseus]
 gi|326367300|gb|ADZ55280.1| geranylgeranyl diphosphate synthase 1 [Moschus moschiferus]
          Length = 107

 Score = 40.1 bits (93), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I   N +     E + +        + ++ +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINYANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
              +  +D +    E +   +   KTG L   A     + +   ++ K  L
Sbjct: 56  --DIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL 104


>gi|329133303|gb|AEB78592.1| geranylgeranyl diphosphate synthase 1 [Camelus bactrianus]
          Length = 119

 Score = 39.8 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 9/110 (8%)

Query: 103 GKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGG 162
           G P  H  Y   + I + N +     E + +        + ++ +L L    GL      
Sbjct: 2   GFPVAHSIYGIPSVINSANYMYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGL------ 55

Query: 163 QMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
             +  +D +    E +   +   KTG L   A     + +   ++ K  L
Sbjct: 56  -DIYWRDNYTCPTEEEYRAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL 104


>gi|55665806|emb|CAH73572.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
 gi|56203646|emb|CAI22355.1| prenyl (decaprenyl) diphosphate synthase, subunit 2 [Homo sapiens]
          Length = 240

 Score = 39.8 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 16/95 (16%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 111 LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNE 170

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                G P   +Q+    AI++G+ LL  A   ++
Sbjct: 171 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA 204


>gi|322795041|gb|EFZ17889.1| hypothetical protein SINV_03094 [Solenopsis invicta]
          Length = 381

 Score = 39.8 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 29/107 (27%)

Query: 43  IRYALLGGKKIRSFLVTECASLF-----NVNHLTALRVGAAIECI--------------- 82
           + Y +L  K++R+F++     L        N      V   +E +               
Sbjct: 214 LEYNVLREKQLRAFILIYAYQLVAKKLTKENMRLIRIVAWCMELVSNFVMYVLFFTFLNK 273

Query: 83  ------HCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGL 123
                    +++ D+L   D    RRGKP  + +     A I  + L
Sbjct: 274 LIKTQMQAATIVIDNLQ--DQSSFRRGKPCWYRRDQIGLATIT-DAL 317


>gi|49409614|gb|AAT65718.1| prenyl transferase [Aspergillus flavus]
          Length = 334

 Score = 39.8 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 34/168 (20%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH   ++ DD+   D    R+G+P  H  Y         N       ++++    +  + 
Sbjct: 100 IHLCLMLVDDIS--DGSDYRKGRPAAHHIYGP---SETANRAYYRVTQLLNRTGHEFPE- 153

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----------TQVFMIQKMKTGALMC 190
             +  +L       L+ +L GQ L +                       +  +KTGAL  
Sbjct: 154 -LAPWLLQC-----LEEILEGQDLSLVWRRDGLSAFPVQPEERVAAYRQMAYLKTGALFR 207

Query: 191 FACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
              +   ++ + S  +    +  +        QL +D  +    D  K
Sbjct: 208 LVGQL--VLENQSYDDTLSTVAWYS-------QLQNDCKNVYSSDYAK 246


>gi|294995849|ref|ZP_06801540.1| putative polyprenyl synthetase IdsB [Mycobacterium tuberculosis
           210]
          Length = 126

 Score = 39.4 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 210 LRCFGENLGIIFQLADDLLDCEEDLP 235
           +  FG  LG+ FQ  DDL+    D  
Sbjct: 1   MERFGHELGLAFQCVDDLIGIWGDPG 26


>gi|297735210|emb|CBI17572.3| unnamed protein product [Vitis vinifera]
          Length = 235

 Score = 39.4 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 24/52 (46%), Gaps = 8/52 (15%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALL-GGKKI 53
               + + + +  ++  LDD        +  +   ++  ++RY+LL GGK+ 
Sbjct: 113 FNFNAYILDKANSVNKALDD-------AVPIREPVKVHESMRYSLLAGGKRF 157


>gi|58044052|gb|AAW64315.1| quemao protein [Drosophila melanogaster]
 gi|58044054|gb|AAW64316.1| quemao protein [Drosophila melanogaster]
 gi|58044056|gb|AAW64317.1| quemao protein [Drosophila melanogaster]
 gi|58044058|gb|AAW64318.1| quemao protein [Drosophila melanogaster]
 gi|58044060|gb|AAW64319.1| quemao protein [Drosophila melanogaster]
 gi|58044062|gb|AAW64320.1| quemao protein [Drosophila melanogaster]
 gi|58044064|gb|AAW64321.1| quemao protein [Drosophila melanogaster]
 gi|58044066|gb|AAW64322.1| quemao protein [Drosophila melanogaster]
 gi|58044068|gb|AAW64323.1| quemao protein [Drosophila melanogaster]
 gi|58044070|gb|AAW64324.1| quemao protein [Drosophila melanogaster]
 gi|58044072|gb|AAW64325.1| quemao protein [Drosophila melanogaster]
 gi|58044074|gb|AAW64326.1| quemao protein [Drosophila melanogaster]
 gi|58044076|gb|AAW64327.1| quemao protein [Drosophila melanogaster]
 gi|58044078|gb|AAW64328.1| quemao protein [Drosophila melanogaster]
 gi|58044080|gb|AAW64329.1| quemao protein [Drosophila melanogaster]
 gi|58044082|gb|AAW64330.1| quemao protein [Drosophila melanogaster]
 gi|58044084|gb|AAW64331.1| quemao protein [Drosophila melanogaster]
 gi|58044086|gb|AAW64332.1| quemao protein [Drosophila melanogaster]
 gi|58044088|gb|AAW64333.1| quemao protein [Drosophila melanogaster]
 gi|58044090|gb|AAW64334.1| quemao protein [Drosophila melanogaster]
 gi|58044092|gb|AAW64335.1| quemao protein [Drosophila melanogaster]
 gi|58044094|gb|AAW64336.1| quemao protein [Drosophila melanogaster]
 gi|58044096|gb|AAW64337.1| quemao protein [Drosophila melanogaster]
          Length = 74

 Score = 39.4 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 27 TASHMQTQHNDRLLSAIRYAL-LGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCY 85
               Q + ++ LL    Y   + GK+ RS L         +      ++G  ++ +H  
Sbjct: 12 KDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNS 71

Query: 86 SLI 88
          SL+
Sbjct: 72 SLL 74


>gi|184201774|ref|YP_001855981.1| hypothetical protein KRH_21280 [Kocuria rhizophila DC2201]
 gi|183582004|dbj|BAG30475.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 411

 Score = 39.4 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 30/94 (31%), Gaps = 1/94 (1%)

Query: 128 FEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGA 187
           + ++++        I+   +L  +      G      L  +   +   +V    ++ +  
Sbjct: 200 YRMVATSHAPETRLIKLLEILDHSVFHAAAGERILGELTQRAATVSHGEVLETLRIGSAV 259

Query: 188 L-MCFACESGAIMAHASQNEKERLRCFGENLGII 220
                   +GA++  A       L   G  LG+ 
Sbjct: 260 PCYEAPLRAGAVLGGAPTAHVNALADTGRALGMA 293


>gi|326367280|gb|ADZ55270.1| geranylgeranyl diphosphate synthase 1 [Delphinus capensis]
 gi|326367288|gb|ADZ55274.1| geranylgeranyl diphosphate synthase 1 [Stenella coeruleoalba]
          Length = 107

 Score = 39.4 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 9/111 (8%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           RG P  H  Y   + I + N +     E + +        + ++ +L L    GL     
Sbjct: 1   RGFPVAHSIYGIPSVINSANYVHFLDLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                 +D +    E +   +   KTG L   A     + +   ++ K  L
Sbjct: 56  --DTYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL 104


>gi|71051966|gb|AAH29491.1| PDSS2 protein [Homo sapiens]
          Length = 174

 Score = 39.0 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 16/95 (16%)

Query: 53  IRSFLVTECASLFNVNHLTA---------------LRVGAAIECIHCYSLIHDDLPSMDN 97
           +R  +V   +     + +                   +    E IH   L+H  + +++ 
Sbjct: 45  LRGLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNE 104

Query: 98  GYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIIS 132
                G P   +Q+    AI++G+ LL  A   ++
Sbjct: 105 LQSSDG-PLKDMQFGNKIAILSGDFLLANACNGLA 138


>gi|218680010|ref|ZP_03527907.1| putative octaprenyl-diphosphate synthase [Rhizobium etli CIAT 894]
          Length = 124

 Score = 39.0 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)

Query: 215 ENLGIIFQLADDLLDC---EEDLPK 236
            NLG+ FQL DD LD      DL K
Sbjct: 1   MNLGLAFQLVDDALDYGGKAADLGK 25


>gi|83773088|dbj|BAE63216.1| unnamed protein product [Aspergillus oryzae]
          Length = 334

 Score = 38.6 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 34/168 (20%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH   ++ DD+   D    R+G+P  H  Y         N       ++++    +  + 
Sbjct: 100 IHLCLMLVDDIS--DGSDYRKGRPAAHHIYGP---SETANRAYYRVTQLLNRTVHEFPE- 153

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----------TQVFMIQKMKTGALMC 190
             +  +L       L+ +L GQ L +                       +  +KTGAL  
Sbjct: 154 -LAPWLLQC-----LEEILEGQDLSLVWRRDGLSAFPVQPEERVAAYRQMAYLKTGALFR 207

Query: 191 FACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
              +   ++ + S  +    +  +        QL +D  +    D  K
Sbjct: 208 LVGQL--VLENQSYDDTLSTVAWYS-------QLQNDCKNVYSSDYAK 246


>gi|78224662|ref|YP_386409.1| response regulator receiver modulated metal dependent
           phosphohydrolase [Geobacter metallireducens GS-15]
 gi|78195917|gb|ABB33684.1| response regulator receiver modulated metal dependent
           phosphohydrolase [Geobacter metallireducens GS-15]
          Length = 479

 Score = 38.6 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 77/238 (32%), Gaps = 48/238 (20%)

Query: 2   NGGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-----SF 56
           N  L  ++ E +  I     + L +    +++   D + +  R   LGGKK R     + 
Sbjct: 197 NENLKVRVLEQTTEIRKK-HENLKELNERLRSNFKDTVTAFSRLIELGGKK-RHAETVAT 254

Query: 57  LVTECASLFNVNHLTALRVGAAIECIHCYSLIHD-------------DLPSMDNGYIRRG 103
           L    A    V+          +E +H  +L+HD             DL  M  G +R  
Sbjct: 255 LAMNIAQAMGVS-------AGEVETVHNAALLHDIGELGIADAILKKDLSEMTPGELR-- 305

Query: 104 KPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQ 163
           +  +H    + TAI A               +      +  +         G    L G+
Sbjct: 306 EYMLHAVRGQ-TAIDA--------------IEELTPAGVLIRHHHEHYDGSGYPDGLRGE 350

Query: 164 MLDIQDEFIDETQVFM--IQKMKTGALMCFACESGAIMAH--ASQNEKERLRCFGENL 217
            + +    I         IQK+     + +   S A         +  E LR F +++
Sbjct: 351 AIPLGSRIIAIADFLDRAIQKLHGYTAIDYGLRSVAAELGKKLDPSLYESLRKFAKHV 408


>gi|110748570|gb|ABG89852.1| geranyl geranyl pirosynthase [Gordonia jacobaea]
          Length = 94

 Score = 38.6 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)

Query: 86  SLIHDDLPSMDNGYIRRGKPTVH 108
           +LIHDD+  MD   +RRGKP +H
Sbjct: 74  ALIHDDV--MDRSRLRRGKPAMH 94


>gi|317031320|ref|XP_001393187.2| geranylgeranyl pyrophosphate synthase [Aspergillus niger CBS
           513.88]
          Length = 728

 Score = 38.6 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 7/110 (6%)

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +R  +   H+ Y     + +   L   A  I++S       +   Q +    H +G
Sbjct: 485 DQAALRDQRTPAHLVYGPAQCMNSAAYLFVRAARIVTSLNCPGMLDGLLQEL--EAHFVG 542

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES--GAIMAHAS 203
               L  +          ET+   +   K GA           A M  A+
Sbjct: 543 QSWELNWRFSTHCP---GETEYLAMVDQKAGASFRLLTRLMQAASMGGAT 589


>gi|284053405|ref|ZP_06383615.1| polyprenyl synthetase [Arthrospira platensis str. Paraca]
          Length = 116

 Score = 38.6 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 218 GIIFQLADDLLDCEE 232
           G+ FQ+ DD+LD   
Sbjct: 1   GLAFQIVDDILDFTG 15


>gi|238500447|ref|XP_002381458.1| prenyl transferase AtmC [Aspergillus flavus NRRL3357]
 gi|220693211|gb|EED49557.1| prenyl transferase AtmC [Aspergillus flavus NRRL3357]
          Length = 334

 Score = 38.2 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 34/168 (20%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH   ++ DD+   D    R+G+P  H  Y         N       ++++    +  + 
Sbjct: 100 IHLCLMLVDDIS--DGSDYRKGRPAAHHIYGP---SETANRAYYRVTQLLNRTVHEFPE- 153

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE-----------TQVFMIQKMKTGALMC 190
             +  +L       L+ +L GQ L +                       +  +KTGAL  
Sbjct: 154 -LAPWLLQC-----LEEILEGQDLSLLWRRDGLSAFPVQPEERVAAYRQMAYLKTGALFR 207

Query: 191 FACESGAIMAHAS-QNEKERLRCFGENLGIIFQLADDLLDCE-EDLPK 236
              +   ++ + S  +    +  +        QL +D  +    D  K
Sbjct: 208 LVGQL--VLENQSYDDTLSTVAWYS-------QLQNDCKNVYSSDYAK 246


>gi|254386870|ref|ZP_05002157.1| hypothetical protein SSAG_06393 [Streptomyces sp. Mg1]
 gi|194345702|gb|EDX26668.1| hypothetical protein SSAG_06393 [Streptomyces sp. Mg1]
          Length = 356

 Score = 38.2 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 71/227 (31%), Gaps = 24/227 (10%)

Query: 10  QENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIR-SFLVTECASLFNVN 68
           ++ S  ID  ++  L Q     +      ++  +R+      ++R    V     L +  
Sbjct: 33  RQVSADIDAEMELALDQLGPAAEAVKAS-VVKLLRHQ-----RLRHPLSVLPM--LVHGV 84

Query: 69  HLTALRVGAAIECIH----CYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLL 124
               LR    I  +H      +   DDL          G P           + +     
Sbjct: 85  ETGTLRPALPISALHVLWWTSACFLDDLADG------HGAPLSAGLTQNEAVLASVISGT 138

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
                II S       +      ++    +G +G L     D  +       V    + K
Sbjct: 139 ILPLRIIHSIPAPAPVHSALTAEIATGWTVGTEGQLRDIRADADN--ATRKSVIAAYRGK 196

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL---ADDLL 228
           +G          AI++ A      R R FG   GI++Q+    +D+L
Sbjct: 197 SGGPFSMITAMAAILSGAHPGRIARWREFGYVFGILWQMFNDQEDIL 243


>gi|145243448|ref|XP_001394251.1| geranylgeranyl diphosphate synthase [Aspergillus niger CBS 513.88]
 gi|134078925|emb|CAK48316.1| unnamed protein product [Aspergillus niger]
          Length = 335

 Score = 38.2 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 9/141 (6%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
            F+      L + +      V   ++ IH   ++ DD+   DN   R+GKP  H  Y   
Sbjct: 73  PFVQKLSPRLKDEDPAKYKMVLEIMDAIHLCLMLVDDI--TDNSDYRKGKPAAHRIYGP- 129

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLK--DNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFI 172
                 N       +I++    +         Q +  +     L  +     L       
Sbjct: 130 --SETANRAYYRVTQILNETVQRFPKLAKFLLQNLEEILEGQDLSLIWRRDGLGSLSTVP 187

Query: 173 DE--TQVFMIQKMKTGALMCF 191
           +E       +  +KTGAL   
Sbjct: 188 EERVAAYRKMASLKTGALFRL 208


>gi|254465595|ref|ZP_05079006.1| transposase IS66 [Rhodobacterales bacterium Y4I]
 gi|206686503|gb|EDZ46985.1| transposase IS66 [Rhodobacterales bacterium Y4I]
          Length = 500

 Score = 38.2 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHM-QTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            ++Q    R   +LDDL    AS + +      L  AIRYAL   KK+R +L      L 
Sbjct: 362 ERVQLRQSRSKPLLDDLEAWLASQLARIPGKSELAKAIRYALTRMKKLRPYLDHGTPELD 421

Query: 66  NVNHLTALRVGAA 78
           N +   A++  A 
Sbjct: 422 NNSAERAMKPIAI 434


>gi|322792972|gb|EFZ16771.1| hypothetical protein SINV_06463 [Solenopsis invicta]
          Length = 289

 Score = 38.2 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 9/176 (5%)

Query: 68  NHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV-TAIIAGNGLLTY 126
           N   A  +G  +E    Y ++ DD+  +D     R KP  +        AI     L   
Sbjct: 55  NIRLARILGWCMEITLAYFIMIDDV--LDQAIFCRDKPCWYRHDGTNLMAINDALLLQNS 112

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
            + +I     + + NI               G         +   +D   +     +   
Sbjct: 113 VYYLIEKHFKRKECNINLVETFLQATFDTQIGQFLDMSSTSKKFNLDRFTMNRYNSIAYS 172

Query: 187 ALMCFACESGAIMAH--ASQNEKERLRC----FGENLGIIFQLADDLLDCEEDLPK 236
                A      +A   A   + + +          LG  +Q+ +D L C  DL K
Sbjct: 173 KSSEIAFLMPVFLAMHYAGIEKVQEMFKQSETILLELGQFYQIQNDCLGCFFDLRK 228


>gi|255943951|ref|XP_002562743.1| Pc20g01840 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587478|emb|CAP85513.1| Pc20g01840 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 336

 Score = 38.2 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 23/121 (19%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDN 141
           IH   ++ DD+   D    R+G+P  H  Y        GN       +I++       + 
Sbjct: 104 IHLCLMLVDDIS--DGSDYRKGRPAAHSIYGP---SETGNRAYYRVTQILNKTTKDFPN- 157

Query: 142 IRSQLMLSLTHNIGLQGMLGGQMLD--IQDEFID---------ETQVFMIQKMKTGALMC 190
                 L+      LQ +L GQ +    + + +                +  +KTG+L  
Sbjct: 158 ------LAPWLMQDLQDILEGQDISLIWRRDGLSAFPIATAERLAAYRRMASLKTGSLFR 211

Query: 191 F 191
            
Sbjct: 212 L 212


>gi|322711433|gb|EFZ03006.1| prenyl transferase [Metarhizium anisopliae ARSEF 23]
          Length = 341

 Score = 38.2 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 82  IHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDE-VTAIIAGNGLLTYAFEIISSPKTQLKD 140
           +H   ++ DD+   D+   R+ + T H+ Y    TA  A   L       +        +
Sbjct: 107 VHFCLILVDDIC--DDSTKRKNQTTAHMLYGSCETANRAYFVLTKTINRAMRERPVLGVE 164

Query: 141 NIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMA 200
            +++   +    ++ L     G       E         + ++KTG L       G ++ 
Sbjct: 165 LLKALEQMLEGQDLSLVWRRDGLKAFGFAEEDRVPMYRNMAQLKTGTLF---VLLGRLLN 221

Query: 201 HASQNEKERLRCFGENLGIIFQLADDLLDCEEDL 234
                       FG       QL +D  +   D 
Sbjct: 222 DGGDQLDNLFTRFGWYA----QLQNDCKNIYSDE 251


>gi|134077716|emb|CAK45756.1| unnamed protein product [Aspergillus niger]
          Length = 565

 Score = 37.8 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 7/110 (6%)

Query: 96  DNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
           D   +R  +   H+ Y     + +   L   A  I++S       +   Q +    H +G
Sbjct: 322 DQAALRDQRTPAHLVYGPAQCMNSAAYLFVRAARIVTSLNCPGMLDGLLQEL--EAHFVG 379

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACES--GAIMAHAS 203
               L  +          ET+   +   K GA           A M  A+
Sbjct: 380 QSWELNWRFSTHCP---GETEYLAMVDQKAGASFRLLTRLMQAASMGGAT 426


>gi|284166662|ref|YP_003404941.1| hypothetical protein Htur_3405 [Haloterrigena turkmenica DSM 5511]
 gi|284016317|gb|ADB62268.1| hypothetical protein Htur_3405 [Haloterrigena turkmenica DSM 5511]
          Length = 332

 Score = 37.4 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 4/112 (3%)

Query: 106 TVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQML 165
           TV +  D    ++A + L   A+  I+      +  +    +L+   +   +  L     
Sbjct: 137 TVQLPADRDAVLLASDHLHAGAYATIADAPLPAERQLELYRLLTEGSSALARRFLLLTDA 196

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
              DE         ++      L   A   GA +  A    +  LR +   +
Sbjct: 197 APVDERRGAIDYADVE----ATLAETAGALGAAVVGAPTETRTALRTYSHAV 244


>gi|254464894|ref|ZP_05078305.1| transposase IS66 [Rhodobacterales bacterium Y4I]
 gi|254466609|ref|ZP_05080020.1| transposase IS66 [Rhodobacterales bacterium Y4I]
 gi|206685802|gb|EDZ46284.1| transposase IS66 [Rhodobacterales bacterium Y4I]
 gi|206687517|gb|EDZ47999.1| transposase IS66 [Rhodobacterales bacterium Y4I]
          Length = 506

 Score = 37.4 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHM-QTQHNDRLLSAIRYALLGGKKIRSFLVTECASLF 65
            ++Q    R   +LDDL    A+ + +      L  AIRYAL   KK+R +L      L 
Sbjct: 362 ERVQLRQSRSKPLLDDLEAWLAAQLARIPGKSELAKAIRYALTRMKKLRPYLDHGILELD 421

Query: 66  NVNHLTALRVGAA 78
           N +   A++  A 
Sbjct: 422 NNSAERAMKPIAI 434


>gi|32188214|gb|AAP46180.1| conserved hypothetical protein [Sphingomonas elodea]
          Length = 478

 Score = 37.4 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 3/87 (3%)

Query: 7   SKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFN 66
           S + EN + +  +  +L           + D LL  +R     G + R   V      FN
Sbjct: 171 SYMLENREAMIRLCPELFRDFRVAPVDSYPDMLLETMRSVAPSG-RARPVCVVLTPGHFN 229

Query: 67  VNHLTALRVG--AAIECIHCYSLIHDD 91
             +     +     +E +    L+ DD
Sbjct: 230 SAYYEHSFLADSMGVELVEAADLVVDD 256


>gi|325143454|gb|EGC65779.1| octaprenyl-diphosphate synthase [Neisseria meningitidis
          M01-240013]
          Length = 61

 Score = 37.4 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 7/61 (11%)

Query: 5  LPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASL 64
              L E+  +++ +++  + Q+   + +Q    ++SA      GGK++R  +       
Sbjct: 8  FQRHLPEDLAKVNEVINRAV-QSDVALISQIGTYIISA------GGKRLRPIMTILAGKA 60

Query: 65 F 65
           
Sbjct: 61 V 61


>gi|114566220|ref|YP_753374.1| hypothetical protein Swol_0676 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337155|gb|ABI68003.1| hypothetical protein Swol_0676 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 252

 Score = 37.1 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 23/166 (13%)

Query: 55  SFLVTECASLFNVNHLTALRVGAAIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEV 114
             LV        ++   ++ +    + ++  + IH     M        K       D  
Sbjct: 50  PPLVYIVYRYLGLDRSISISMTNIFKTLYLANSIH----GMVKDDKEGQK----YDQDLQ 101

Query: 115 TAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDE 174
            AI+ G+ +     +++                L     + +  +  GQ+++ + +   +
Sbjct: 102 FAILIGDYMFGRMLKLLVEAGADK---------LVGLFAVMMAEINEGQVMERKLQAAHK 152

Query: 175 TQVFMIQKMKT-GALMCFACESGAIMAHASQNEKERLRCFGENLGI 219
             +      KT G++   A E+   ++       E  R  G NLG+
Sbjct: 153 DVLQ-----KTRGSIYATAFETAGHLSGMKGILLENCRQLGLNLGM 193


>gi|284051047|ref|ZP_06381257.1| Polyprenyl synthetase [Arthrospira platensis str. Paraca]
          Length = 81

 Score = 37.1 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 218 GIIFQLADDLLDCEE 232
           G+ FQ+ DD+LD   
Sbjct: 1   GLAFQIVDDILDITA 15


>gi|257094812|ref|YP_003168453.1| squalene synthase HpnD [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047336|gb|ACV36524.1| squalene synthase HpnD [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 277

 Score = 37.1 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 5/112 (4%)

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L +  + +S        +  +Q + + +    L      +++D     + +T+       
Sbjct: 60  LAWWRQELSGLYAGKPQHPVTQALQAASGEFHLPEEQLQEIIDGMAMDLQQTRYLD---F 116

Query: 184 KTGALMCFACES--GAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K  +L C+   S  G + A     +  + + +  +LG+ FQL + + D  ED
Sbjct: 117 KALSLYCYRVASVVGLLAAEIFGYQDRKTQKYAHDLGLAFQLTNIIRDVGED 168


>gi|5533307|gb|AAD45122.1|AF164026_1 farnesyl pyrophosphate synthase [Xanthoceras sorbifolium]
          Length = 148

 Score = 36.7 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 19/45 (42%)

Query: 188 LMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEE 232
                     +MA  + +    ++    ++GI FQ+ DD LDC  
Sbjct: 1   SFYLPVACALLMAGENLDNHVDVKNTLVDMGIYFQVQDDYLDCFG 45


>gi|238014738|gb|ACR38404.1| unknown [Zea mays]
          Length = 119

 Score = 36.7 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LDC  D
Sbjct: 1   MGTYFQVQDDYLDCFGD 17


>gi|322784137|gb|EFZ11222.1| hypothetical protein SINV_08135 [Solenopsis invicta]
          Length = 125

 Score = 36.7 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 166 DIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQL 223
           D  D  + E  +  I     G+L   +C+S   +A  ++  +E    FG++L + +Q+
Sbjct: 40  DRTDYAVTEWTLLNIHV---GSLFAKSCQSTLKIAGHNKEMEENGFEFGKHLALAWQV 94


>gi|239787478|emb|CAX83949.1| Squalene/phytoene synthase [uncultured bacterium]
          Length = 298

 Score = 36.7 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 203 SQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                  L  F  +LGI FQL + L D  ED  
Sbjct: 146 PPEMLRALDRFAHHLGIAFQLTNILRDVNEDSA 178


>gi|300766617|ref|ZP_07076534.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|300495717|gb|EFK30868.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 119

 Score = 36.3 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 217 LGIIFQLADDLLDCEEDLP 235
           +G+ +Q+ DD+LD   D  
Sbjct: 1   MGLAYQMLDDVLDYAGDEA 19


>gi|254480525|ref|ZP_05093772.1| hypothetical protein GPB2148_3613 [marine gamma proteobacterium
           HTCC2148]
 gi|214039108|gb|EEB79768.1| hypothetical protein GPB2148_3613 [marine gamma proteobacterium
           HTCC2148]
          Length = 1064

 Score = 36.3 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 19  ILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKI---RSFLVTECASLFNVNHLTALRV 75
            L + L     H  T   + L+  ++Y +  GK++   R FLVT  A          + +
Sbjct: 128 WLPEELEIGRLHFITAAEETLIFPLQYIV--GKRLDRTR-FLVTATAEYEGEPLAVQVDI 184

Query: 76  GAAIECIHCYSLI 88
            AA E      LI
Sbjct: 185 AAAFEEQQSAGLI 197


>gi|258655210|ref|YP_003204366.1| hypothetical protein Namu_5107 [Nakamurella multipartita DSM 44233]
 gi|258558435|gb|ACV81377.1| hypothetical protein Namu_5107 [Nakamurella multipartita DSM 44233]
          Length = 333

 Score = 36.3 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 8/139 (5%)

Query: 94  SMDNGYIRRGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHN 153
            MD    R        +       I  + L+  A    +        ++   L       
Sbjct: 92  DMDGDPPR-----FWSESSAAERSIGAHVLIATA---AAQAPIGAVPSLVPTLAQIYLDM 143

Query: 154 IGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCF 213
           +        +  D  DE      V    + ++GA++    +  A+ A    + +  +R F
Sbjct: 144 VATVTEGQLRAEDRLDEQTAPEDVTAGIEARSGAMLAGFADLTAVAAGTGADIRRAVRRF 203

Query: 214 GENLGIIFQLADDLLDCEE 232
           G  L +  QL +D+ + E 
Sbjct: 204 GRELAMARQLVNDITELES 222


>gi|307106094|gb|EFN54341.1| hypothetical protein CHLNCDRAFT_24871 [Chlorella variabilis]
          Length = 437

 Score = 36.3 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 97  NGYIRRGKPTVHIQYDEVTAIIAGNG-LLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIG 155
              +RR   +   ++       AG+  L      + ++   +L  ++R    L      G
Sbjct: 238 RAGLRR---SCTRRHCSCVLPAAGDLPLFPDPVLLPTTAPVRLPQDLRHMPALHDLVKAG 294

Query: 156 LQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE 215
           ++ M+ G                 +    T ++   +  SGA  A  S +   RL  +G 
Sbjct: 295 MRMMMSGDSSQW-------DAALQMPHYSTYSMPALSLHSGAHFAQWSNDLSFRLFDYGT 347

Query: 216 N 216
            
Sbjct: 348 A 348


>gi|242046572|ref|XP_002399925.1| hypothetical protein IscW_ISCW006431 [Ixodes scapularis]
 gi|215497592|gb|EEC07086.1| hypothetical protein IscW_ISCW006431 [Ixodes scapularis]
          Length = 304

 Score = 36.3 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 24/158 (15%)

Query: 63  SLFNVNHLTALRVGA---AIECIHCYSLIHDDLPSMDNGYIRRGKPTVHIQYDEVTAIIA 119
           +L   N+   ++       ++ +H  +L             R G+    +      A++ 
Sbjct: 63  ALVRANYERVVKASEMQHIMQALHSSTLT-----------TRGGEKEEDVVLGNKLAVLV 111

Query: 120 GNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFM 179
           G+  LT AF+ I+  +        S+ +         +G      +D  ++   E   + 
Sbjct: 112 GDLFLTLAFKEITDIQDSTVLETFSKGVELFATPD-FEGTPRRPSIDWWEKCSAEKHSWF 170

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
                  +    +     +      +E+E  R  G NL
Sbjct: 171 ------ASAFECSVLVAGV---RCDDEREAARKCGRNL 199


>gi|332529309|ref|ZP_08405271.1| squalene synthase hpnd [Hylemonella gracilis ATCC 19624]
 gi|332041226|gb|EGI77590.1| squalene synthase hpnd [Hylemonella gracilis ATCC 19624]
          Length = 297

 Score = 36.3 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 159 MLGGQMLD-IQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGENL 217
           ++ G  +D  Q  ++D   +     +  G +   A       +       E    +   L
Sbjct: 108 VIEGCEMDLQQSRYLDYPGLQRYCHLVAGVVGEVAARIFGGHSGTDPTLDELRTRYAHTL 167

Query: 218 GIIFQLADDLLDCEED 233
           G+ FQL + + D  ED
Sbjct: 168 GLAFQLTNIIRDVGED 183


>gi|254173022|ref|ZP_04879696.1| Replication factor C family protein [Thermococcus sp. AM4]
 gi|214033178|gb|EEB74006.1| Replication factor C family protein [Thermococcus sp. AM4]
          Length = 870

 Score = 35.9 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 30/89 (33%)

Query: 127 AFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTG 186
           A+E++     +L +  + +  LS +  +    +   +    +   I   ++    K K  
Sbjct: 404 AWELMKEIYYRLDELEKLEKALSRSILVDWNEVARRRKEIAEKTGIRHDRLLEYIKGKRK 463

Query: 187 ALMCFACESGAIMAHASQNEKERLRCFGE 215
             +    +    +    +   E +R F  
Sbjct: 464 PSLRNYLKIAGALGIQLEETIEAMRTFAR 492


>gi|237746070|ref|ZP_04576550.1| phytoene synthase [Oxalobacter formigenes HOxBLS]
 gi|229377421|gb|EEO27512.1| phytoene synthase [Oxalobacter formigenes HOxBLS]
          Length = 278

 Score = 35.9 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I+       D++ +Q ++       ++    G ++D  +  +D  +     +++      
Sbjct: 68  IADMYAGHPDHLITQALMPHLQAFSIEESQLGAIVDGMEMDLDRKRYASFGELEKYCWHV 127

Query: 191 FACE--SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
                   A +   +Q +      + E LG+ FQL + + D  ED+ 
Sbjct: 128 AGVVGILAAKIFGVTQADT---LEYAEKLGLAFQLTNIIRDVGEDIG 171


>gi|167755976|ref|ZP_02428103.1| hypothetical protein CLORAM_01496 [Clostridium ramosum DSM 1402]
 gi|167703968|gb|EDS18547.1| hypothetical protein CLORAM_01496 [Clostridium ramosum DSM 1402]
          Length = 277

 Score = 35.9 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 194 ESGAIMAHASQNEKERLRCFGENLG--IIFQLADDLLDCEEDLPKK 237
             G I A+      + L  FG  LG  I F   D   D E+DL K+
Sbjct: 165 VMGEICAYKDDEWHDELYEFGFYLGKFIYF--IDAYEDIEQDLKKR 208


>gi|237748479|ref|ZP_04578959.1| phytoene synthase [Oxalobacter formigenes OXCC13]
 gi|229379841|gb|EEO29932.1| phytoene synthase [Oxalobacter formigenes OXCC13]
          Length = 278

 Score = 35.9 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 5/107 (4%)

Query: 131 ISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMC 190
           I+  +    D++ +Q +        L   L   ++D  +  +D+ +      +K      
Sbjct: 68  IAEMEAGRPDHLITQALFPHLEAFNLDVNLLLAIIDGMEMDLDKVRYESFDDLKKYCWHV 127

Query: 191 FACE--SGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEEDLP 235
            +      A +   +  +      + E LG+ FQL + + D  ED+ 
Sbjct: 128 ASAVGILAARIFGLTNPQT---GEYAEKLGLAFQLTNIIRDVGEDIK 171


>gi|326367302|gb|ADZ55281.1| geranylgeranyl diphosphate synthase 1 [Delphinapterus leucas]
          Length = 107

 Score = 35.9 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLG 161
           R  P  H  Y   + I + N +     E + +        + ++ +L L    GL     
Sbjct: 1   RAFPVAHSIYGIPSVINSANYVHFLDLEKVLTLDHPDAVKLFTRQLLELHQGQGL----- 55

Query: 162 GQMLDIQDEFI--DETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERL 210
                 +D +    E +   +   KTG L   A     + +   ++ K  L
Sbjct: 56  --DTYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLL 104


>gi|123192416|gb|ABM73368.1| farnesyl diphosphate synthetase [Phaeosphaeria aff. nodorum
           ZL-2007a]
          Length = 137

 Score = 35.5 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 19/142 (13%)

Query: 102 RGKPTVHIQYDEVTAIIAGNGLLTYAFEIISSPKTQLKDNIRSQ----LMLSLTHNIGLQ 157
           RG P  +       A   G   +  AF + S+    LK + R +     M+ L H +  Q
Sbjct: 2   RGVPCWY------LAPKVGMIAINDAFMLESAIYVLLKKHFRQEKSYVDMMELFHEVTFQ 55

Query: 158 GMLGGQML-------DIQDEFIDETQVFMIQKMKTGALMCF--ACESGAIMAHASQNEKE 208
              G           D+  +     +   I   KT     +     +      A+    +
Sbjct: 56  TECGQLCDLLTAPEDDVNLDNFSLDKFTFIVIYKTAYYSFYLPVALALYYAGAATPKNLQ 115

Query: 209 RLRCFGENLGIIFQLADDLLDC 230
                   +G  FQ  DD  DC
Sbjct: 116 TAEDILIPMGEYFQAQDDYFDC 137


>gi|242223537|ref|XP_002477380.1| predicted protein [Postia placenta Mad-698-R]
 gi|220723093|gb|EED77422.1| predicted protein [Postia placenta Mad-698-R]
          Length = 178

 Score = 35.1 bits (80), Expect = 7.3,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 18/61 (29%), Gaps = 7/61 (11%)

Query: 179 MIQKMKTG-ALMCFACESGAIMAH------ASQNEKERLRCFGENLGIIFQLADDLLDCE 231
           +I   KT              M         S +  E  R     LG  FQ+ DD LD  
Sbjct: 6   LIVIYKTAFYSFYLPVALAMYMCGIQHGPAPSSDPYELARSILIPLGEYFQVQDDFLDFA 65

Query: 232 E 232
            
Sbjct: 66  G 66


>gi|121603226|ref|YP_980555.1| hypothetical protein Pnap_0311 [Polaromonas naphthalenivorans CJ2]
 gi|120592195|gb|ABM35634.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]
          Length = 272

 Score = 35.1 bits (80), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 161 GGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIMAHASQNEKERLRCFGE---NL 217
            G+    +       ++ +    KT A +  + E   ++A A Q+    L  +G    + 
Sbjct: 26  AGRSCQARPPTTQSVELGLALAEKTLASLNASGERVVLLARAGQD----LSRYGLRYSHF 81

Query: 218 GIIFQLAD 225
           G+ +Q+AD
Sbjct: 82  GLAWQVAD 89


>gi|224124722|ref|XP_002329932.1| predicted protein [Populus trichocarpa]
 gi|222871954|gb|EEF09085.1| predicted protein [Populus trichocarpa]
          Length = 134

 Score = 35.1 bits (80), Expect = 7.7,   Method: Composition-based stats.
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 217 LGIIFQLADDLLDCEED 233
           +G  FQ+ DD LDC  D
Sbjct: 19  MGTYFQVQDDCLDCFGD 35


>gi|313616875|gb|EFR89546.1| polyprenyl synthetase [Listeria innocua FSL S4-378]
          Length = 75

 Score = 35.1 bits (80), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 12/75 (16%)

Query: 4  GLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECAS 63
           L   LQE  + I++ +         H++    D + +       GGK +R       A 
Sbjct: 12 ALSKDLQEVLQTIESNI----QIRDKHVEKNVKDLIHA-------GGKLLRPAFALLSAQ 60

Query: 64 LFNV-NHLTALRVGA 77
               +   A+ + A
Sbjct: 61 AGPEFDKERAVSIAA 75


>gi|289064372|gb|ADC80558.1| bidirectional NAD(P)-linked NiFe hydrogenase [uncultured
           Burkholderiales bacterium]
          Length = 276

 Score = 35.1 bits (80), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 17/76 (22%)

Query: 29  SHMQTQHNDRLLSAIRYALLGGKKIRSFLVTECASLFNVNHLTALRVGAAIECIHCYSLI 88
           +H+ T   +    A  +A  GGK               VN          IE +HC  LI
Sbjct: 119 NHIPTPIAEEARQA-YFAFAGGK--------------PVNRSLYYHWARIIEMVHCAELI 163

Query: 89  HD--DLPSMDNGYIRR 102
            D    P + +  +RR
Sbjct: 164 RDLLHDPDILSDDLRR 179


>gi|317157517|ref|XP_003190849.1| hypothetical protein AOR_1_1636054 [Aspergillus oryzae RIB40]
          Length = 160

 Score = 35.1 bits (80), Expect = 8.6,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 4/62 (6%)

Query: 180 IQKMKTGALMCFACESGAIMAHASQNEKER--LRCFGENLGIIFQLADDLLDCEEDL--P 235
           +   KT           A  A  S + +++  L  F   LG  +Q+ DD  +   D    
Sbjct: 1   MIDNKTAGFFRLVLRMMAAEASVSMSLEKKNTLLHFITLLGRYYQIRDDYQNLVSDEYAA 60

Query: 236 KK 237
           KK
Sbjct: 61  KK 62


>gi|322823783|gb|EFZ29439.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 568

 Score = 35.1 bits (80), Expect = 8.7,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 4/74 (5%)

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM---AHASQNEK 207
              +G+ G L    +  +   I         ++   AL    C   A++   A     E 
Sbjct: 482 VQEMGMDGTLEEIRVHCESHGIPLITCMSRHRL-AYALFAKGCTVSAVLLHSAEGVHEEV 540

Query: 208 ERLRCFGENLGIIF 221
             LR + ++L   F
Sbjct: 541 RALRHYAQHLFEAF 554


>gi|320170093|gb|EFW46992.1| coiled-coil domain containing 132 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1022

 Score = 35.1 bits (80), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 3   GGLPSKLQENSKRIDTILDDLLLQTASHMQTQHNDRLLSAIRYALLG 49
             +  +L++  ++I+  LD+ L + A+    Q  +++L+A  Y+LLG
Sbjct: 171 ADMSYRLKDTYEQIEDRLDEALKKVANDFDVQAYEKVLTA--YSLLG 215


>gi|71410396|ref|XP_807494.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70871509|gb|EAN85643.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 602

 Score = 35.1 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 4/74 (5%)

Query: 151 THNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMKTGALMCFACESGAIM---AHASQNEK 207
              +G+ G L       +   I         ++   AL    C   A++   A     E 
Sbjct: 516 VQEMGMDGTLEEIRAHCESHGIPLITCMSRHRL-AYALFAKGCTVSAVLLHSAEGVHEEV 574

Query: 208 ERLRCFGENLGIIF 221
             LR + ++L   F
Sbjct: 575 RALRHYAQHLFEAF 588


>gi|326387683|ref|ZP_08209289.1| farnesyl-diphosphate farnesyltransferase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207729|gb|EGD58540.1| farnesyl-diphosphate farnesyltransferase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 314

 Score = 34.8 bits (79), Expect = 9.1,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 5/109 (4%)

Query: 125 TYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKMK 184
             AF  I +                LT  +    + G  +     +  +ET +       
Sbjct: 78  ARAFSGIETGDPAFDCLAMVARETGLTPAMADDVLAGFALDATGWQPRNETDLMRYCWHV 137

Query: 185 TGALMCFACESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
            GA+        A++     ++ E L   G +LG+ FQLA+   D  ED
Sbjct: 138 AGAVGV----MMAVVMGVDPDDAETLERAG-DLGMAFQLANIARDLAED 181


>gi|241767202|ref|ZP_04764952.1| squalene synthase HpnD [Acidovorax delafieldii 2AN]
 gi|241362161|gb|EER58242.1| squalene synthase HpnD [Acidovorax delafieldii 2AN]
          Length = 279

 Score = 34.8 bits (79), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 38/112 (33%), Gaps = 5/112 (4%)

Query: 124 LTYAFEIISSPKTQLKDNIRSQLMLSLTHNIGLQGMLGGQMLDIQDEFIDETQVFMIQKM 183
           L +    ++        +     ++  T   G++      ++D     +++T+      +
Sbjct: 60  LAWWQAEVAKAYAGQPTHPVMLALMPHTAEFGIEQRHLQAVIDGCHMDLEQTRYLDFAGL 119

Query: 184 KTGALMCFAC--ESGAIMAHASQNEKERLRCFGENLGIIFQLADDLLDCEED 233
           K    +      E  A +   +         +   LG+ FQL + + D  ED
Sbjct: 120 KGYCHLVAGIVGEVAARIFGQTDPRT---TEYAHTLGLAFQLTNIIRDVGED 168


>gi|24372679|ref|NP_716721.1| O-acetylhomoserine (thiol)-lyase, putative [Shewanella oneidensis
           MR-1]
 gi|24346731|gb|AAN54166.1|AE015554_1 O-acetylhomoserine (thiol)-lyase, putative [Shewanella oneidensis
           MR-1]
          Length = 430

 Score = 34.8 bits (79), Expect = 9.4,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 52/150 (34%), Gaps = 15/150 (10%)

Query: 59  TECASLFNVNHLTALRVGAAIECIHCYSLIHDD---------LPSMDNGYIRRGKPTVHI 109
            E  +L +     A    AA+      S   DD         L    N Y R   PT  +
Sbjct: 3   LESLALHHGYESEATTKAAAVPIYQTTSYTFDDTQHGADLFDLKVAGNIYTRIMNPTTSV 62

Query: 110 QYDEVTAIIAGNGLLTYAFEIIS-----SPKTQLKDNIRS-QLMLSLTHNIGLQGMLGGQ 163
               + AI  G G L  A  + +        TQ+ DNI S   +   T+N+    +    
Sbjct: 63  LEQRLAAIEGGIGALAVASGMAAITYAIQALTQVGDNIVSTSQLYGGTYNLFAHTLPRQG 122

Query: 164 MLDIQDEFIDETQVFMIQKMKTGALMCFAC 193
           +      F D  ++  +   KT AL C + 
Sbjct: 123 VEVRMAAFDDFEELEALIDAKTKALFCESI 152


>gi|260433633|ref|ZP_05787604.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417461|gb|EEX10720.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 260

 Score = 34.8 bits (79), Expect = 9.8,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 9/97 (9%)

Query: 127 AFEIISSPKTQLKDNIRS--QLMLSLTHNIGLQGMLGGQMLD-IQDEFIDETQVFMIQKM 183
           A + I+   T  +  + +    +LS      L   +  +  D  +D F DE         
Sbjct: 71  ALQEIAEGPTVRRHEVVTPLSRVLSPHLAAMLDEYVAVRRWDIYRDPFEDEAHFEAYLTH 130

Query: 184 KTGALMCFACESGAIMAHASQNEKERLRCFGENLGII 220
             G+LM  + ++   +  A +     LR FG  +G+ 
Sbjct: 131 SAGSLMVASAQA---LGAADETV---LRDFGYAVGVA 161


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.315    0.163    0.524 

Lambda     K      H
   0.267   0.0501    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,775,997,454
Number of Sequences: 14124377
Number of extensions: 221105540
Number of successful extensions: 662198
Number of sequences better than 10.0: 6541
Number of HSP's better than 10.0 without gapping: 10283
Number of HSP's successfully gapped in prelim test: 1926
Number of HSP's that attempted gapping in prelim test: 625590
Number of HSP's gapped (non-prelim): 12987
length of query: 237
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 102
effective length of database: 2,936,002,735
effective search space: 299472278970
effective search space used: 299472278970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 80 (35.1 bits)